##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM252908v1 #!genome-build-accession NCBI_Assembly:GCA_002529085.1 #!annotation-date 09/05/2017 11:50:48 #!annotation-source NCBI ##sequence-region NSLJ01000100.1 1 710 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000100.1 Genbank region 1 710 . + . ID=NSLJ01000100.1:1..710;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000100.1 Genbank gene 287 526 . + . ID=gene-CLI86_13900;Name=CLI86_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13900 NSLJ01000100.1 GeneMarkS+ CDS 287 526 . + 0 ID=cds-PDP40627.1;Parent=gene-CLI86_13900;Dbxref=NCBI_GP:PDP40627.1;Name=PDP40627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13900;product=hypothetical protein;protein_id=PDP40627.1;transl_table=11 ##sequence-region NSLJ01000101.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000101.1 Genbank region 1 665 . + . ID=NSLJ01000101.1:1..665;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000101.1 Genbank gene 28 240 . + . ID=gene-CLI86_13905;Name=CLI86_13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13905 NSLJ01000101.1 GeneMarkS+ CDS 28 240 . + 0 ID=cds-PDP40592.1;Parent=gene-CLI86_13905;Dbxref=NCBI_GP:PDP40592.1;Name=PDP40592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13905;product=hypothetical protein;protein_id=PDP40592.1;transl_table=11 ##sequence-region NSLJ01000102.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000102.1 Genbank region 1 654 . + . ID=NSLJ01000102.1:1..654;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000102.1 Genbank pseudogene 1 502 . + . ID=gene-CLI86_13910;Name=CLI86_13910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13910;pseudo=true NSLJ01000102.1 Protein Homology CDS 1 502 . + 2 ID=cds-CLI86_13910;Parent=gene-CLI86_13910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224885.1;locus_tag=CLI86_13910;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000103.1 1 646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000103.1 Genbank region 1 646 . + . ID=NSLJ01000103.1:1..646;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000103.1 Genbank gene 1 167 . + . ID=gene-CLI86_13915;Name=CLI86_13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13915;partial=true;start_range=.,1 NSLJ01000103.1 Protein Homology CDS 1 167 . + 2 ID=cds-PDP40577.1;Parent=gene-CLI86_13915;Dbxref=NCBI_GP:PDP40577.1;Name=PDP40577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223556.1;locus_tag=CLI86_13915;partial=true;product=6-bladed beta-propeller;protein_id=PDP40577.1;start_range=.,1;transl_table=11 NSLJ01000103.1 Genbank gene 249 646 . + . ID=gene-CLI86_13920;Name=CLI86_13920;end_range=646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13920;partial=true NSLJ01000103.1 Protein Homology CDS 249 646 . + 0 ID=cds-PDP40578.1;Parent=gene-CLI86_13920;Dbxref=NCBI_GP:PDP40578.1;Name=PDP40578.1;end_range=646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_13920;partial=true;product=IS1595 family transposase;protein_id=PDP40578.1;transl_table=11 ##sequence-region NSLJ01000104.1 1 627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000104.1 Genbank region 1 627 . + . ID=NSLJ01000104.1:1..627;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000104.1 Genbank gene 1 627 . + . ID=gene-CLI86_13925;Name=CLI86_13925;end_range=627,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13925;partial=true;start_range=.,1 NSLJ01000104.1 GeneMarkS+ CDS 1 627 . + 1 ID=cds-PDP40564.1;Parent=gene-CLI86_13925;Dbxref=NCBI_GP:PDP40564.1;Name=PDP40564.1;end_range=627,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13925;partial=true;product=hypothetical protein;protein_id=PDP40564.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000105.1 1 604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000105.1 Genbank region 1 604 . + . ID=NSLJ01000105.1:1..604;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000105.1 Genbank gene 1 213 . - . ID=gene-CLI86_13930;Name=CLI86_13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13930;partial=true;start_range=.,1 NSLJ01000105.1 Protein Homology CDS 1 213 . - 0 ID=cds-PDP40547.1;Parent=gene-CLI86_13930;Dbxref=NCBI_GP:PDP40547.1;Name=PDP40547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007564783.1;locus_tag=CLI86_13930;partial=true;product=DUF4372 domain-containing protein;protein_id=PDP40547.1;start_range=.,1;transl_table=11 NSLJ01000105.1 Genbank pseudogene 368 484 . - . ID=gene-CLI86_13935;Name=CLI86_13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13935;pseudo=true NSLJ01000105.1 Protein Homology CDS 368 484 . - 0 ID=cds-CLI86_13935;Parent=gene-CLI86_13935;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_13935;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000106.1 1 600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000106.1 Genbank region 1 600 . + . ID=NSLJ01000106.1:1..600;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000106.1 Genbank pseudogene 1 600 . - . ID=gene-CLI86_13940;Name=CLI86_13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13940;pseudo=true NSLJ01000106.1 Protein Homology CDS 1 600 . - 1 ID=cds-CLI86_13940;Parent=gene-CLI86_13940;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004383427.1;locus_tag=CLI86_13940;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000107.1 1 595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000107.1 Genbank region 1 595 . + . ID=NSLJ01000107.1:1..595;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000108.1 1 516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000108.1 Genbank region 1 516 . + . ID=NSLJ01000108.1:1..516;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000108.1 Genbank gene 1 163 . + . ID=gene-CLI86_13945;Name=CLI86_13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13945;partial=true;start_range=.,1 NSLJ01000108.1 Protein Homology CDS 1 163 . + 1 ID=cds-PDP40517.1;Parent=gene-CLI86_13945;Dbxref=NCBI_GP:PDP40517.1;Name=PDP40517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1;locus_tag=CLI86_13945;partial=true;product=30S ribosomal protein S19;protein_id=PDP40517.1;start_range=.,1;transl_table=11 NSLJ01000108.1 Genbank gene 218 516 . + . ID=gene-CLI86_13950;Name=CLI86_13950;end_range=516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13950;partial=true NSLJ01000108.1 Protein Homology CDS 218 516 . + 0 ID=cds-PDP40518.1;Parent=gene-CLI86_13950;Dbxref=NCBI_GP:PDP40518.1;Name=PDP40518.1;end_range=516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007662145.1;locus_tag=CLI86_13950;partial=true;product=50S ribosomal protein L22;protein_id=PDP40518.1;transl_table=11 ##sequence-region NSLJ01000109.1 1 560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000109.1 Genbank region 1 560 . + . ID=NSLJ01000109.1:1..560;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000010.1 1 103134 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000010.1 Genbank region 1 103134 . + . ID=NSLJ01000010.1:1..103134;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000010.1 Genbank gene 88 276 . - . ID=gene-CLI86_05110;Name=CLI86_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05110 NSLJ01000010.1 GeneMarkS+ CDS 88 276 . - 0 ID=cds-PDP44057.1;Parent=gene-CLI86_05110;Dbxref=NCBI_GP:PDP44057.1;Name=PDP44057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05110;product=hypothetical protein;protein_id=PDP44057.1;transl_table=11 NSLJ01000010.1 Genbank gene 392 2470 . + . ID=gene-CLI86_05115;Name=CLI86_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05115 NSLJ01000010.1 Protein Homology CDS 392 2470 . + 0 ID=cds-PDP44058.1;Parent=gene-CLI86_05115;Dbxref=NCBI_GP:PDP44058.1;Name=PDP44058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010802101.1;locus_tag=CLI86_05115;product=thiol:disulfide interchange protein;protein_id=PDP44058.1;transl_table=11 NSLJ01000010.1 Genbank gene 2494 3258 . + . ID=gene-CLI86_05120;Name=CLI86_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05120 NSLJ01000010.1 Protein Homology CDS 2494 3258 . + 0 ID=cds-PDP44130.1;Parent=gene-CLI86_05120;Dbxref=NCBI_GP:PDP44130.1;Name=PDP44130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654629.1;locus_tag=CLI86_05120;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=PDP44130.1;transl_table=11 NSLJ01000010.1 Genbank gene 3507 6164 . + . ID=gene-CLI86_05125;Name=CLI86_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05125 NSLJ01000010.1 Protein Homology CDS 3507 6164 . + 0 ID=cds-PDP44131.1;Parent=gene-CLI86_05125;Dbxref=NCBI_GP:PDP44131.1;Name=PDP44131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224741.1;locus_tag=CLI86_05125;product=glycoside hydrolase family 2;protein_id=PDP44131.1;transl_table=11 NSLJ01000010.1 Genbank gene 6390 9218 . + . ID=gene-CLI86_05130;Name=CLI86_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05130 NSLJ01000010.1 Protein Homology CDS 6390 9218 . + 0 ID=cds-PDP44059.1;Parent=gene-CLI86_05130;Dbxref=NCBI_GP:PDP44059.1;Name=PDP44059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224742.1;locus_tag=CLI86_05130;product=TonB-dependent receptor;protein_id=PDP44059.1;transl_table=11 NSLJ01000010.1 Genbank gene 9224 10861 . + . ID=gene-CLI86_05135;Name=CLI86_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05135 NSLJ01000010.1 Protein Homology CDS 9224 10861 . + 0 ID=cds-PDP44060.1;Parent=gene-CLI86_05135;Dbxref=NCBI_GP:PDP44060.1;Name=PDP44060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224743.1;locus_tag=CLI86_05135;product=hypothetical protein;protein_id=PDP44060.1;transl_table=11 NSLJ01000010.1 Genbank gene 10899 12446 . + . ID=gene-CLI86_05140;Name=CLI86_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05140 NSLJ01000010.1 Protein Homology CDS 10899 12446 . + 0 ID=cds-PDP44061.1;Parent=gene-CLI86_05140;Dbxref=NCBI_GP:PDP44061.1;Name=PDP44061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224744.1;locus_tag=CLI86_05140;product=hypothetical protein;protein_id=PDP44061.1;transl_table=11 NSLJ01000010.1 Genbank gene 12518 13777 . + . ID=gene-CLI86_05145;Name=CLI86_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05145 NSLJ01000010.1 Protein Homology CDS 12518 13777 . + 0 ID=cds-PDP44062.1;Parent=gene-CLI86_05145;Dbxref=NCBI_GP:PDP44062.1;Name=PDP44062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224745.1;locus_tag=CLI86_05145;product=serine/threonine protein phosphatase;protein_id=PDP44062.1;transl_table=11 NSLJ01000010.1 Genbank gene 14188 15819 . + . ID=gene-CLI86_05150;Name=CLI86_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05150 NSLJ01000010.1 Protein Homology CDS 14188 15819 . + 0 ID=cds-PDP44132.1;Parent=gene-CLI86_05150;Dbxref=NCBI_GP:PDP44132.1;Name=PDP44132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224747.1;locus_tag=CLI86_05150;product=alpha-galactosidase;protein_id=PDP44132.1;transl_table=11 NSLJ01000010.1 Genbank gene 15998 16903 . + . ID=gene-CLI86_05155;Name=CLI86_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05155 NSLJ01000010.1 Protein Homology CDS 15998 16903 . + 0 ID=cds-PDP44063.1;Parent=gene-CLI86_05155;Dbxref=NCBI_GP:PDP44063.1;Name=PDP44063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224748.1;locus_tag=CLI86_05155;product=site-specific tyrosine recombinase XerD;protein_id=PDP44063.1;transl_table=11 NSLJ01000010.1 Genbank gene 16919 17938 . - . ID=gene-CLI86_05160;Name=CLI86_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05160 NSLJ01000010.1 Protein Homology CDS 16919 17938 . - 0 ID=cds-PDP44064.1;Parent=gene-CLI86_05160;Dbxref=NCBI_GP:PDP44064.1;Name=PDP44064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224749.1;locus_tag=CLI86_05160;product=lysylphosphatidylglycerol synthetase family protein;protein_id=PDP44064.1;transl_table=11 NSLJ01000010.1 Genbank gene 18114 18929 . + . ID=gene-CLI86_05165;Name=CLI86_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05165 NSLJ01000010.1 Protein Homology CDS 18114 18929 . + 0 ID=cds-PDP44133.1;Parent=gene-CLI86_05165;Dbxref=NCBI_GP:PDP44133.1;Name=PDP44133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224750.1;locus_tag=CLI86_05165;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=PDP44133.1;transl_table=11 NSLJ01000010.1 Genbank gene 18934 19881 . + . ID=gene-CLI86_05170;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CLI86_05170 NSLJ01000010.1 Protein Homology CDS 18934 19881 . + 0 ID=cds-PDP44065.1;Parent=gene-CLI86_05170;Dbxref=NCBI_GP:PDP44065.1;Name=PDP44065.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006799731.1;locus_tag=CLI86_05170;product=magnesium and cobalt transport protein CorA;protein_id=PDP44065.1;transl_table=11 NSLJ01000010.1 Genbank gene 19935 21473 . - . ID=gene-CLI86_05175;Name=CLI86_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05175 NSLJ01000010.1 Protein Homology CDS 19935 21473 . - 0 ID=cds-PDP44134.1;Parent=gene-CLI86_05175;Dbxref=NCBI_GP:PDP44134.1;Name=PDP44134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147002.1;locus_tag=CLI86_05175;product=magnesium chelatase;protein_id=PDP44134.1;transl_table=11 NSLJ01000010.1 Genbank gene 21639 22385 . + . ID=gene-CLI86_05180;Name=CLI86_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05180 NSLJ01000010.1 Protein Homology CDS 21639 22385 . + 0 ID=cds-PDP44066.1;Parent=gene-CLI86_05180;Dbxref=NCBI_GP:PDP44066.1;Name=PDP44066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00590.18;locus_tag=CLI86_05180;product=precorrin-2 C(20)-methyltransferase;protein_id=PDP44066.1;transl_table=11 NSLJ01000010.1 Genbank gene 22431 23558 . - . ID=gene-CLI86_05185;Name=CLI86_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05185 NSLJ01000010.1 Protein Homology CDS 22431 23558 . - 0 ID=cds-PDP44067.1;Parent=gene-CLI86_05185;Dbxref=NCBI_GP:PDP44067.1;Name=PDP44067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224755.1;locus_tag=CLI86_05185;product=DUF5009 domain-containing protein;protein_id=PDP44067.1;transl_table=11 NSLJ01000010.1 Genbank gene 23560 24978 . - . ID=gene-CLI86_05190;Name=CLI86_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05190 NSLJ01000010.1 Protein Homology CDS 23560 24978 . - 0 ID=cds-PDP44135.1;Parent=gene-CLI86_05190;Dbxref=NCBI_GP:PDP44135.1;Name=PDP44135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224756.1;locus_tag=CLI86_05190;product=hypothetical protein;protein_id=PDP44135.1;transl_table=11 NSLJ01000010.1 Genbank gene 24968 26533 . - . ID=gene-CLI86_05195;Name=CLI86_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05195 NSLJ01000010.1 Protein Homology CDS 24968 26533 . - 0 ID=cds-PDP44068.1;Parent=gene-CLI86_05195;Dbxref=NCBI_GP:PDP44068.1;Name=PDP44068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002560782.1;locus_tag=CLI86_05195;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44068.1;transl_table=11 NSLJ01000010.1 Genbank gene 26545 30015 . - . ID=gene-CLI86_05200;Name=CLI86_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05200 NSLJ01000010.1 Protein Homology CDS 26545 30015 . - 0 ID=cds-PDP44069.1;Parent=gene-CLI86_05200;Dbxref=NCBI_GP:PDP44069.1;Name=PDP44069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016660851.1;locus_tag=CLI86_05200;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44069.1;transl_table=11 NSLJ01000010.1 Genbank gene 30282 30878 . + . ID=gene-CLI86_05205;Name=CLI86_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05205 NSLJ01000010.1 Protein Homology CDS 30282 30878 . + 0 ID=cds-PDP44070.1;Parent=gene-CLI86_05205;Dbxref=NCBI_GP:PDP44070.1;Name=PDP44070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224759.1;locus_tag=CLI86_05205;product=RNA polymerase sigma-70 factor;protein_id=PDP44070.1;transl_table=11 NSLJ01000010.1 Genbank gene 30892 31971 . + . ID=gene-CLI86_05210;Name=CLI86_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05210 NSLJ01000010.1 Protein Homology CDS 30892 31971 . + 0 ID=cds-PDP44071.1;Parent=gene-CLI86_05210;Dbxref=NCBI_GP:PDP44071.1;Name=PDP44071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005829676.1;locus_tag=CLI86_05210;product=hypothetical protein;protein_id=PDP44071.1;transl_table=11 NSLJ01000010.1 Genbank gene 31960 32904 . - . ID=gene-CLI86_05215;Name=CLI86_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05215 NSLJ01000010.1 Protein Homology CDS 31960 32904 . - 0 ID=cds-PDP44072.1;Parent=gene-CLI86_05215;Dbxref=NCBI_GP:PDP44072.1;Name=PDP44072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224761.1;locus_tag=CLI86_05215;product=glycosyltransferase;protein_id=PDP44072.1;transl_table=11 NSLJ01000010.1 Genbank gene 32901 33281 . - . ID=gene-CLI86_05220;Name=CLI86_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05220 NSLJ01000010.1 Protein Homology CDS 32901 33281 . - 0 ID=cds-PDP44073.1;Parent=gene-CLI86_05220;Dbxref=NCBI_GP:PDP44073.1;Name=PDP44073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224762.1;locus_tag=CLI86_05220;product=GtrA family protein;protein_id=PDP44073.1;transl_table=11 NSLJ01000010.1 Genbank gene 33358 34335 . - . ID=gene-CLI86_05225;Name=CLI86_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05225 NSLJ01000010.1 Protein Homology CDS 33358 34335 . - 0 ID=cds-PDP44074.1;Parent=gene-CLI86_05225;Dbxref=NCBI_GP:PDP44074.1;Name=PDP44074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019967049.1;locus_tag=CLI86_05225;product=Tat pathway signal protein;protein_id=PDP44074.1;transl_table=11 NSLJ01000010.1 Genbank gene 34386 35720 . - . ID=gene-CLI86_05230;Name=CLI86_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05230 NSLJ01000010.1 Protein Homology CDS 34386 35720 . - 0 ID=cds-PDP44136.1;Parent=gene-CLI86_05230;Dbxref=NCBI_GP:PDP44136.1;Name=PDP44136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224764.1;locus_tag=CLI86_05230;product=glycosyltransferase;protein_id=PDP44136.1;transl_table=11 NSLJ01000010.1 Genbank gene 35837 37363 . - . ID=gene-CLI86_05235;Name=CLI86_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05235 NSLJ01000010.1 Protein Homology CDS 35837 37363 . - 0 ID=cds-PDP44075.1;Parent=gene-CLI86_05235;Dbxref=NCBI_GP:PDP44075.1;Name=PDP44075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002560782.1;locus_tag=CLI86_05235;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44075.1;transl_table=11 NSLJ01000010.1 Genbank gene 37403 40591 . - . ID=gene-CLI86_05240;Name=CLI86_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05240 NSLJ01000010.1 Protein Homology CDS 37403 40591 . - 0 ID=cds-PDP44076.1;Parent=gene-CLI86_05240;Dbxref=NCBI_GP:PDP44076.1;Name=PDP44076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224766.1;locus_tag=CLI86_05240;product=TonB-dependent receptor;protein_id=PDP44076.1;transl_table=11 NSLJ01000010.1 Genbank gene 40762 41040 . - . ID=gene-CLI86_05245;Name=CLI86_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05245 NSLJ01000010.1 GeneMarkS+ CDS 40762 41040 . - 0 ID=cds-PDP44077.1;Parent=gene-CLI86_05245;Dbxref=NCBI_GP:PDP44077.1;Name=PDP44077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05245;product=hypothetical protein;protein_id=PDP44077.1;transl_table=11 NSLJ01000010.1 Genbank gene 41113 41805 . - . ID=gene-CLI86_05250;Name=CLI86_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05250 NSLJ01000010.1 Protein Homology CDS 41113 41805 . - 0 ID=cds-PDP44078.1;Parent=gene-CLI86_05250;Dbxref=NCBI_GP:PDP44078.1;Name=PDP44078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224768.1;locus_tag=CLI86_05250;product=hypothetical protein;protein_id=PDP44078.1;transl_table=11 NSLJ01000010.1 Genbank gene 41812 42501 . - . ID=gene-CLI86_05255;Name=CLI86_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05255 NSLJ01000010.1 Protein Homology CDS 41812 42501 . - 0 ID=cds-PDP44079.1;Parent=gene-CLI86_05255;Dbxref=NCBI_GP:PDP44079.1;Name=PDP44079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224769.1;locus_tag=CLI86_05255;product=DUF5012 domain-containing protein;protein_id=PDP44079.1;transl_table=11 NSLJ01000010.1 Genbank gene 42526 44079 . - . ID=gene-CLI86_05260;Name=CLI86_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05260 NSLJ01000010.1 Protein Homology CDS 42526 44079 . - 0 ID=cds-PDP44080.1;Parent=gene-CLI86_05260;Dbxref=NCBI_GP:PDP44080.1;Name=PDP44080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224770.1;locus_tag=CLI86_05260;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP44080.1;transl_table=11 NSLJ01000010.1 Genbank gene 44104 47271 . - . ID=gene-CLI86_05265;Name=CLI86_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05265 NSLJ01000010.1 Protein Homology CDS 44104 47271 . - 0 ID=cds-PDP44081.1;Parent=gene-CLI86_05265;Dbxref=NCBI_GP:PDP44081.1;Name=PDP44081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224771.1;locus_tag=CLI86_05265;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44081.1;transl_table=11 NSLJ01000010.1 Genbank gene 47595 48698 . + . ID=gene-CLI86_05270;Name=CLI86_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05270 NSLJ01000010.1 Protein Homology CDS 47595 48698 . + 0 ID=cds-PDP44082.1;Parent=gene-CLI86_05270;Dbxref=NCBI_GP:PDP44082.1;Name=PDP44082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007661265.1;locus_tag=CLI86_05270;product=redox-regulated ATPase YchF;protein_id=PDP44082.1;transl_table=11 NSLJ01000010.1 Genbank gene 48749 49489 . + . ID=gene-CLI86_05275;Name=CLI86_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05275 NSLJ01000010.1 Protein Homology CDS 48749 49489 . + 0 ID=cds-PDP44083.1;Parent=gene-CLI86_05275;Dbxref=NCBI_GP:PDP44083.1;Name=PDP44083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12836.5;locus_tag=CLI86_05275;product=competence protein ComEA;protein_id=PDP44083.1;transl_table=11 NSLJ01000010.1 Genbank gene 49623 49841 . - . ID=gene-CLI86_05280;Name=CLI86_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05280 NSLJ01000010.1 GeneMarkS+ CDS 49623 49841 . - 0 ID=cds-PDP44084.1;Parent=gene-CLI86_05280;Dbxref=NCBI_GP:PDP44084.1;Name=PDP44084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05280;product=hypothetical protein;protein_id=PDP44084.1;transl_table=11 NSLJ01000010.1 Genbank gene 49941 51551 . + . ID=gene-CLI86_05285;Name=CLI86_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05285 NSLJ01000010.1 Protein Homology CDS 49941 51551 . + 0 ID=cds-PDP44085.1;Parent=gene-CLI86_05285;Dbxref=NCBI_GP:PDP44085.1;Name=PDP44085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224776.1;locus_tag=CLI86_05285;product=hypothetical protein;protein_id=PDP44085.1;transl_table=11 NSLJ01000010.1 Genbank gene 51689 51991 . + . ID=gene-CLI86_05290;Name=CLI86_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05290 NSLJ01000010.1 Protein Homology CDS 51689 51991 . + 0 ID=cds-PDP44086.1;Parent=gene-CLI86_05290;Dbxref=NCBI_GP:PDP44086.1;Name=PDP44086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09394.8;locus_tag=CLI86_05290;product=hypothetical protein;protein_id=PDP44086.1;transl_table=11 NSLJ01000010.1 Genbank gene 51999 52811 . + . ID=gene-CLI86_05295;Name=CLI86_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05295 NSLJ01000010.1 Protein Homology CDS 51999 52811 . + 0 ID=cds-PDP44087.1;Parent=gene-CLI86_05295;Dbxref=NCBI_GP:PDP44087.1;Name=PDP44087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224778.1;locus_tag=CLI86_05295;product=peptidase;protein_id=PDP44087.1;transl_table=11 NSLJ01000010.1 Genbank gene 53356 53547 . + . ID=gene-CLI86_05300;Name=CLI86_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05300 NSLJ01000010.1 GeneMarkS+ CDS 53356 53547 . + 0 ID=cds-PDP44088.1;Parent=gene-CLI86_05300;Dbxref=NCBI_GP:PDP44088.1;Name=PDP44088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05300;product=hypothetical protein;protein_id=PDP44088.1;transl_table=11 NSLJ01000010.1 Genbank gene 53805 55115 . + . ID=gene-CLI86_05305;Name=CLI86_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05305 NSLJ01000010.1 Protein Homology CDS 53805 55115 . + 0 ID=cds-PDP44089.1;Parent=gene-CLI86_05305;Dbxref=NCBI_GP:PDP44089.1;Name=PDP44089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224783.1;locus_tag=CLI86_05305;product=radical SAM/SPASM domain-containing protein;protein_id=PDP44089.1;transl_table=11 NSLJ01000010.1 Genbank gene 55155 57473 . + . ID=gene-CLI86_05310;Name=CLI86_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05310 NSLJ01000010.1 Protein Homology CDS 55155 57473 . + 0 ID=cds-PDP44090.1;Parent=gene-CLI86_05310;Dbxref=NCBI_GP:PDP44090.1;Name=PDP44090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_05310;product=TonB-dependent receptor;protein_id=PDP44090.1;transl_table=11 NSLJ01000010.1 Genbank gene 57478 59682 . + . ID=gene-CLI86_05315;Name=CLI86_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05315 NSLJ01000010.1 Protein Homology CDS 57478 59682 . + 0 ID=cds-PDP44137.1;Parent=gene-CLI86_05315;Dbxref=NCBI_GP:PDP44137.1;Name=PDP44137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224785.1;locus_tag=CLI86_05315;product=ABC transporter ATP-binding protein;protein_id=PDP44137.1;transl_table=11 NSLJ01000010.1 Genbank gene 59685 60152 . + . ID=gene-CLI86_05320;Name=CLI86_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05320 NSLJ01000010.1 GeneMarkS+ CDS 59685 60152 . + 0 ID=cds-PDP44091.1;Parent=gene-CLI86_05320;Dbxref=NCBI_GP:PDP44091.1;Name=PDP44091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05320;product=hypothetical protein;protein_id=PDP44091.1;transl_table=11 NSLJ01000010.1 Genbank gene 60227 60988 . - . ID=gene-CLI86_05325;Name=CLI86_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05325 NSLJ01000010.1 Protein Homology CDS 60227 60988 . - 0 ID=cds-PDP44092.1;Parent=gene-CLI86_05325;Dbxref=NCBI_GP:PDP44092.1;Name=PDP44092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224787.1;locus_tag=CLI86_05325;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=PDP44092.1;transl_table=11 NSLJ01000010.1 Genbank gene 60991 61308 . - . ID=gene-CLI86_05330;Name=CLI86_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05330 NSLJ01000010.1 Protein Homology CDS 60991 61308 . - 0 ID=cds-PDP44093.1;Parent=gene-CLI86_05330;Dbxref=NCBI_GP:PDP44093.1;Name=PDP44093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146258.1;locus_tag=CLI86_05330;product=DUF59 domain-containing protein;protein_id=PDP44093.1;transl_table=11 NSLJ01000010.1 Genbank gene 61374 62081 . - . ID=gene-CLI86_05335;Name=CLI86_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05335 NSLJ01000010.1 Protein Homology CDS 61374 62081 . - 0 ID=cds-PDP44094.1;Parent=gene-CLI86_05335;Dbxref=NCBI_GP:PDP44094.1;Name=PDP44094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224789.1;locus_tag=CLI86_05335;product=hypothetical protein;protein_id=PDP44094.1;transl_table=11 NSLJ01000010.1 Genbank gene 62126 62689 . - . ID=gene-CLI86_05340;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CLI86_05340 NSLJ01000010.1 Protein Homology CDS 62126 62689 . - 0 ID=cds-PDP44095.1;Parent=gene-CLI86_05340;Dbxref=NCBI_GP:PDP44095.1;Name=PDP44095.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005840678.1;locus_tag=CLI86_05340;product=elongation factor P;protein_id=PDP44095.1;transl_table=11 NSLJ01000010.1 Genbank gene 63664 64137 . - . ID=gene-CLI86_05345;Name=CLI86_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05345 NSLJ01000010.1 Protein Homology CDS 63664 64137 . - 0 ID=cds-PDP44096.1;Parent=gene-CLI86_05345;Dbxref=NCBI_GP:PDP44096.1;Name=PDP44096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224793.1;locus_tag=CLI86_05345;product=CYTH domain-containing protein;protein_id=PDP44096.1;transl_table=11 NSLJ01000010.1 Genbank gene 64142 65206 . - . ID=gene-CLI86_05350;Name=CLI86_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05350 NSLJ01000010.1 Protein Homology CDS 64142 65206 . - 0 ID=cds-PDP44097.1;Parent=gene-CLI86_05350;Dbxref=NCBI_GP:PDP44097.1;Name=PDP44097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224794.1;locus_tag=CLI86_05350;product=DUF2027 domain-containing protein;protein_id=PDP44097.1;transl_table=11 NSLJ01000010.1 Genbank gene 65525 65794 . + . ID=gene-CLI86_05355;Name=CLI86_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05355 NSLJ01000010.1 Protein Homology CDS 65525 65794 . + 0 ID=cds-PDP44098.1;Parent=gene-CLI86_05355;Dbxref=NCBI_GP:PDP44098.1;Name=PDP44098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858788.1;locus_tag=CLI86_05355;product=co-chaperone GroES;protein_id=PDP44098.1;transl_table=11 NSLJ01000010.1 Genbank gene 65843 67477 . + . ID=gene-CLI86_05360;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CLI86_05360 NSLJ01000010.1 Protein Homology CDS 65843 67477 . + 0 ID=cds-PDP44099.1;Parent=gene-CLI86_05360;Dbxref=NCBI_GP:PDP44099.1;Name=PDP44099.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005941147.1;locus_tag=CLI86_05360;product=chaperonin GroEL;protein_id=PDP44099.1;transl_table=11 NSLJ01000010.1 Genbank gene 67567 68256 . - . ID=gene-CLI86_05365;Name=CLI86_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05365 NSLJ01000010.1 Protein Homology CDS 67567 68256 . - 0 ID=cds-PDP44100.1;Parent=gene-CLI86_05365;Dbxref=NCBI_GP:PDP44100.1;Name=PDP44100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224797.1;locus_tag=CLI86_05365;product=amidophosphoribosyltransferase;protein_id=PDP44100.1;transl_table=11 NSLJ01000010.1 Genbank gene 68237 68752 . - . ID=gene-CLI86_05370;Name=CLI86_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05370 NSLJ01000010.1 Protein Homology CDS 68237 68752 . - 0 ID=cds-PDP44101.1;Parent=gene-CLI86_05370;Dbxref=NCBI_GP:PDP44101.1;Name=PDP44101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224798.1;locus_tag=CLI86_05370;product=hypothetical protein;protein_id=PDP44101.1;transl_table=11 NSLJ01000010.1 Genbank gene 68737 69591 . - . ID=gene-CLI86_05375;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CLI86_05375 NSLJ01000010.1 Protein Homology CDS 68737 69591 . - 0 ID=cds-PDP44102.1;Parent=gene-CLI86_05375;Dbxref=NCBI_GP:PDP44102.1;Name=PDP44102.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005650485.1;locus_tag=CLI86_05375;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=PDP44102.1;transl_table=11 NSLJ01000010.1 Genbank gene 69653 70726 . + . ID=gene-CLI86_05380;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CLI86_05380 NSLJ01000010.1 Protein Homology CDS 69653 70726 . + 0 ID=cds-PDP44103.1;Parent=gene-CLI86_05380;Dbxref=NCBI_GP:PDP44103.1;Name=PDP44103.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224800.1;locus_tag=CLI86_05380;product=riboflavin biosynthesis protein RibD;protein_id=PDP44103.1;transl_table=11 NSLJ01000010.1 Genbank gene 70838 72196 . + . ID=gene-CLI86_05385;Name=CLI86_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05385 NSLJ01000010.1 GeneMarkS+ CDS 70838 72196 . + 0 ID=cds-PDP44104.1;Parent=gene-CLI86_05385;Dbxref=NCBI_GP:PDP44104.1;Name=PDP44104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05385;product=hypothetical protein;protein_id=PDP44104.1;transl_table=11 NSLJ01000010.1 Genbank gene 72266 72985 . + . ID=gene-CLI86_05390;Name=CLI86_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05390 NSLJ01000010.1 Protein Homology CDS 72266 72985 . + 0 ID=cds-PDP44138.1;Parent=gene-CLI86_05390;Dbxref=NCBI_GP:PDP44138.1;Name=PDP44138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224802.1;locus_tag=CLI86_05390;product=hypothetical protein;protein_id=PDP44138.1;transl_table=11 NSLJ01000010.1 Genbank gene 73001 73747 . + . ID=gene-CLI86_05395;Name=CLI86_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05395 NSLJ01000010.1 Protein Homology CDS 73001 73747 . + 0 ID=cds-PDP44105.1;Parent=gene-CLI86_05395;Dbxref=NCBI_GP:PDP44105.1;Name=PDP44105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812637.1;locus_tag=CLI86_05395;product=isoprenyl transferase;protein_id=PDP44105.1;transl_table=11 NSLJ01000010.1 Genbank gene 73760 76462 . + . ID=gene-CLI86_05400;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CLI86_05400 NSLJ01000010.1 Protein Homology CDS 73760 76462 . + 0 ID=cds-PDP44106.1;Parent=gene-CLI86_05400;Dbxref=NCBI_GP:PDP44106.1;Name=PDP44106.1;gbkey=CDS;gene=bamA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224804.1;locus_tag=CLI86_05400;product=outer membrane protein assembly factor BamA;protein_id=PDP44106.1;transl_table=11 NSLJ01000010.1 Genbank gene 76544 77062 . + . ID=gene-CLI86_05405;Name=CLI86_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05405 NSLJ01000010.1 Protein Homology CDS 76544 77062 . + 0 ID=cds-PDP44107.1;Parent=gene-CLI86_05405;Dbxref=NCBI_GP:PDP44107.1;Name=PDP44107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006800926.1;locus_tag=CLI86_05405;product=hypothetical protein;protein_id=PDP44107.1;transl_table=11 NSLJ01000010.1 Genbank gene 77127 77621 . + . ID=gene-CLI86_05410;Name=CLI86_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05410 NSLJ01000010.1 Protein Homology CDS 77127 77621 . + 0 ID=cds-PDP44108.1;Parent=gene-CLI86_05410;Dbxref=NCBI_GP:PDP44108.1;Name=PDP44108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654948.1;locus_tag=CLI86_05410;product=hypothetical protein;protein_id=PDP44108.1;transl_table=11 NSLJ01000010.1 Genbank gene 77705 78532 . + . ID=gene-CLI86_05415;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CLI86_05415 NSLJ01000010.1 Protein Homology CDS 77705 78532 . + 0 ID=cds-PDP44109.1;Parent=gene-CLI86_05415;Dbxref=NCBI_GP:PDP44109.1;Name=PDP44109.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224807.1;locus_tag=CLI86_05415;product=glutamate racemase;protein_id=PDP44109.1;transl_table=11 NSLJ01000010.1 Genbank gene 78542 79231 . + . ID=gene-CLI86_05420;Name=CLI86_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05420 NSLJ01000010.1 Protein Homology CDS 78542 79231 . + 0 ID=cds-PDP44110.1;Parent=gene-CLI86_05420;Dbxref=NCBI_GP:PDP44110.1;Name=PDP44110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224808.1;locus_tag=CLI86_05420;product=peptidase M15;protein_id=PDP44110.1;transl_table=11 NSLJ01000010.1 Genbank gene 79239 79607 . - . ID=gene-CLI86_05425;Name=CLI86_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05425 NSLJ01000010.1 Protein Homology CDS 79239 79607 . - 0 ID=cds-PDP44111.1;Parent=gene-CLI86_05425;Dbxref=NCBI_GP:PDP44111.1;Name=PDP44111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224809.1;locus_tag=CLI86_05425;product=YccF family protein;protein_id=PDP44111.1;transl_table=11 NSLJ01000010.1 Genbank gene 79656 80411 . - . ID=gene-CLI86_05430;Name=CLI86_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05430 NSLJ01000010.1 Protein Homology CDS 79656 80411 . - 0 ID=cds-PDP44112.1;Parent=gene-CLI86_05430;Dbxref=NCBI_GP:PDP44112.1;Name=PDP44112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155967.1;locus_tag=CLI86_05430;product=zinc ABC transporter ATP-binding protein;protein_id=PDP44112.1;transl_table=11 NSLJ01000010.1 Genbank gene 80427 82505 . - . ID=gene-CLI86_05435;Name=CLI86_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05435 NSLJ01000010.1 Protein Homology CDS 80427 82505 . - 0 ID=cds-PDP44113.1;Parent=gene-CLI86_05435;Dbxref=NCBI_GP:PDP44113.1;Name=PDP44113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800894.1;locus_tag=CLI86_05435;product=hypothetical protein;protein_id=PDP44113.1;transl_table=11 NSLJ01000010.1 Genbank gene 82513 82848 . - . ID=gene-CLI86_05440;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CLI86_05440 NSLJ01000010.1 Protein Homology CDS 82513 82848 . - 0 ID=cds-PDP44114.1;Parent=gene-CLI86_05440;Dbxref=NCBI_GP:PDP44114.1;Name=PDP44114.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859883.1;locus_tag=CLI86_05440;product=ribosome-binding factor A;protein_id=PDP44114.1;transl_table=11 NSLJ01000010.1 Genbank gene 83066 83860 . - . ID=gene-CLI86_05445;Name=CLI86_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05445 NSLJ01000010.1 Protein Homology CDS 83066 83860 . - 0 ID=cds-PDP44115.1;Parent=gene-CLI86_05445;Dbxref=NCBI_GP:PDP44115.1;Name=PDP44115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03372.21;locus_tag=CLI86_05445;product=hypothetical protein;protein_id=PDP44115.1;transl_table=11 NSLJ01000010.1 Genbank gene 84036 85577 . - . ID=gene-CLI86_05450;Name=CLI86_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05450 NSLJ01000010.1 Protein Homology CDS 84036 85577 . - 0 ID=cds-PDP44116.1;Parent=gene-CLI86_05450;Dbxref=NCBI_GP:PDP44116.1;Name=PDP44116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016479163.1;locus_tag=CLI86_05450;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44116.1;transl_table=11 NSLJ01000010.1 Genbank gene 85590 88994 . - . ID=gene-CLI86_05455;Name=CLI86_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05455 NSLJ01000010.1 Protein Homology CDS 85590 88994 . - 0 ID=cds-PDP44117.1;Parent=gene-CLI86_05455;Dbxref=NCBI_GP:PDP44117.1;Name=PDP44117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224815.1;locus_tag=CLI86_05455;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44117.1;transl_table=11 NSLJ01000010.1 Genbank gene 89256 90239 . - . ID=gene-CLI86_05460;Name=CLI86_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05460 NSLJ01000010.1 Protein Homology CDS 89256 90239 . - 0 ID=cds-PDP44118.1;Parent=gene-CLI86_05460;Dbxref=NCBI_GP:PDP44118.1;Name=PDP44118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16344.3;locus_tag=CLI86_05460;product=iron dicitrate transport regulator FecR;protein_id=PDP44118.1;transl_table=11 NSLJ01000010.1 Genbank gene 90349 90918 . - . ID=gene-CLI86_05465;Name=CLI86_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05465 NSLJ01000010.1 Protein Homology CDS 90349 90918 . - 0 ID=cds-PDP44119.1;Parent=gene-CLI86_05465;Dbxref=NCBI_GP:PDP44119.1;Name=PDP44119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866979.1;locus_tag=CLI86_05465;product=RNA polymerase sigma-70 factor;protein_id=PDP44119.1;transl_table=11 NSLJ01000010.1 Genbank gene 91016 91645 . - . ID=gene-CLI86_05470;Name=CLI86_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05470 NSLJ01000010.1 Protein Homology CDS 91016 91645 . - 0 ID=cds-PDP44120.1;Parent=gene-CLI86_05470;Dbxref=NCBI_GP:PDP44120.1;Name=PDP44120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644596.1;locus_tag=CLI86_05470;product=O-methyltransferase;protein_id=PDP44120.1;transl_table=11 NSLJ01000010.1 Genbank gene 91664 93109 . - . ID=gene-CLI86_05475;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CLI86_05475 NSLJ01000010.1 Protein Homology CDS 91664 93109 . - 0 ID=cds-PDP44121.1;Parent=gene-CLI86_05475;Dbxref=NCBI_GP:PDP44121.1;Name=PDP44121.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146186.1;locus_tag=CLI86_05475;product=pyruvate kinase;protein_id=PDP44121.1;transl_table=11 NSLJ01000010.1 Genbank gene 93106 93525 . - . ID=gene-CLI86_05480;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=CLI86_05480 NSLJ01000010.1 Protein Homology CDS 93106 93525 . - 0 ID=cds-PDP44122.1;Parent=gene-CLI86_05480;Dbxref=NCBI_GP:PDP44122.1;Name=PDP44122.1;gbkey=CDS;gene=aroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224820.1;locus_tag=CLI86_05480;product=type II 3-dehydroquinate dehydratase;protein_id=PDP44122.1;transl_table=11 NSLJ01000010.1 Genbank gene 93785 94849 . - . ID=gene-CLI86_05485;Name=CLI86_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05485 NSLJ01000010.1 Protein Homology CDS 93785 94849 . - 0 ID=cds-PDP44123.1;Parent=gene-CLI86_05485;Dbxref=NCBI_GP:PDP44123.1;Name=PDP44123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253829.1;locus_tag=CLI86_05485;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP44123.1;transl_table=11 NSLJ01000010.1 Genbank gene 94846 95922 . - . ID=gene-CLI86_05490;Name=CLI86_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05490 NSLJ01000010.1 Protein Homology CDS 94846 95922 . - 0 ID=cds-PDP44124.1;Parent=gene-CLI86_05490;Dbxref=NCBI_GP:PDP44124.1;Name=PDP44124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009437479.1;locus_tag=CLI86_05490;product=radical SAM/SPASM domain-containing protein;protein_id=PDP44124.1;transl_table=11 NSLJ01000010.1 Genbank gene 96503 97138 . + . ID=gene-CLI86_05495;Name=CLI86_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05495 NSLJ01000010.1 Protein Homology CDS 96503 97138 . + 0 ID=cds-PDP44125.1;Parent=gene-CLI86_05495;Dbxref=NCBI_GP:PDP44125.1;Name=PDP44125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224825.1;locus_tag=CLI86_05495;product=SAM-dependent methyltransferase;protein_id=PDP44125.1;transl_table=11 NSLJ01000010.1 Genbank gene 97202 97675 . + . ID=gene-CLI86_05500;Name=CLI86_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05500 NSLJ01000010.1 Protein Homology CDS 97202 97675 . + 0 ID=cds-PDP44126.1;Parent=gene-CLI86_05500;Dbxref=NCBI_GP:PDP44126.1;Name=PDP44126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224826.1;locus_tag=CLI86_05500;product=diguanylate cyclase;protein_id=PDP44126.1;transl_table=11 NSLJ01000010.1 Genbank gene 97790 99217 . + . ID=gene-CLI86_05505;Name=CLI86_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05505 NSLJ01000010.1 Protein Homology CDS 97790 99217 . + 0 ID=cds-PDP44127.1;Parent=gene-CLI86_05505;Dbxref=NCBI_GP:PDP44127.1;Name=PDP44127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224827.1;locus_tag=CLI86_05505;product=tRNA nucleotidyltransferase;protein_id=PDP44127.1;transl_table=11 NSLJ01000010.1 Genbank gene 99206 101425 . - . ID=gene-CLI86_05510;Name=CLI86_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05510 NSLJ01000010.1 Protein Homology CDS 99206 101425 . - 0 ID=cds-PDP44128.1;Parent=gene-CLI86_05510;Dbxref=NCBI_GP:PDP44128.1;Name=PDP44128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634910.1;locus_tag=CLI86_05510;product=RelA/SpoT family protein;protein_id=PDP44128.1;transl_table=11 NSLJ01000010.1 Genbank gene 101510 102160 . - . ID=gene-CLI86_05515;Name=CLI86_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05515 NSLJ01000010.1 Protein Homology CDS 101510 102160 . - 0 ID=cds-PDP44129.1;Parent=gene-CLI86_05515;Dbxref=NCBI_GP:PDP44129.1;Name=PDP44129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224829.1;locus_tag=CLI86_05515;product=phosphatase;protein_id=PDP44129.1;transl_table=11 ##sequence-region NSLJ01000110.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000110.1 Genbank region 1 525 . + . ID=NSLJ01000110.1:1..525;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000110.1 Genbank gene 126 525 . + . ID=gene-CLI86_13955;Name=CLI86_13955;end_range=525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13955;partial=true NSLJ01000110.1 Protein Homology CDS 126 525 . + 0 ID=cds-PDP40500.1;Parent=gene-CLI86_13955;Dbxref=NCBI_GP:PDP40500.1;Name=PDP40500.1;end_range=525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673637.1;locus_tag=CLI86_13955;partial=true;product=TetR family transcriptional regulator;protein_id=PDP40500.1;transl_table=11 ##sequence-region NSLJ01000111.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000111.1 Genbank region 1 514 . + . ID=NSLJ01000111.1:1..514;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000111.1 Genbank gene 241 514 . + . ID=gene-CLI86_13960;Name=CLI86_13960;end_range=514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13960;partial=true NSLJ01000111.1 Protein Homology CDS 241 514 . + 0 ID=cds-PDP40499.1;Parent=gene-CLI86_13960;Dbxref=NCBI_GP:PDP40499.1;Name=PDP40499.1;end_range=514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358640.1;locus_tag=CLI86_13960;partial=true;product=hypothetical protein;protein_id=PDP40499.1;transl_table=11 ##sequence-region NSLJ01000112.1 1 508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000112.1 Genbank region 1 508 . + . ID=NSLJ01000112.1:1..508;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000112.1 Genbank gene 1 508 . - . ID=gene-CLI86_13965;Name=msrA;end_range=508,.;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CLI86_13965;partial=true;start_range=.,1 NSLJ01000112.1 Protein Homology CDS 1 508 . - 2 ID=cds-PDP40488.1;Parent=gene-CLI86_13965;Dbxref=NCBI_GP:PDP40488.1;Name=PDP40488.1;end_range=508,.;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358810.1;locus_tag=CLI86_13965;partial=true;product=peptide-methionine (S)-S-oxide reductase;protein_id=PDP40488.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000113.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000113.1 Genbank region 1 506 . + . ID=NSLJ01000113.1:1..506;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000113.1 Genbank gene 1 203 . - . ID=gene-CLI86_13970;Name=CLI86_13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13970;partial=true;start_range=.,1 NSLJ01000113.1 Protein Homology CDS 1 203 . - 0 ID=cds-PDP40480.1;Parent=gene-CLI86_13970;Dbxref=NCBI_GP:PDP40480.1;Name=PDP40480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_13970;partial=true;product=hypothetical protein;protein_id=PDP40480.1;start_range=.,1;transl_table=11 NSLJ01000113.1 Genbank gene 289 506 . - . ID=gene-CLI86_13975;Name=CLI86_13975;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13975;partial=true NSLJ01000113.1 Protein Homology CDS 289 506 . - 2 ID=cds-PDP40481.1;Parent=gene-CLI86_13975;Dbxref=NCBI_GP:PDP40481.1;Name=PDP40481.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226173.1;locus_tag=CLI86_13975;partial=true;product=hypothetical protein;protein_id=PDP40481.1;transl_table=11 ##sequence-region NSLJ01000114.1 1 502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000114.1 Genbank region 1 502 . + . ID=NSLJ01000114.1:1..502;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000114.1 Genbank gene 1 313 . + . ID=gene-CLI86_13980;Name=CLI86_13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13980;partial=true;start_range=.,1 NSLJ01000114.1 Protein Homology CDS 1 313 . + 1 ID=cds-PDP40467.1;Parent=gene-CLI86_13980;Dbxref=NCBI_GP:PDP40467.1;Name=PDP40467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357951.1;locus_tag=CLI86_13980;partial=true;product=hypothetical protein;protein_id=PDP40467.1;start_range=.,1;transl_table=11 NSLJ01000114.1 Genbank gene 315 502 . + . ID=gene-CLI86_13985;Name=CLI86_13985;end_range=502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13985;partial=true NSLJ01000114.1 Protein Homology CDS 315 502 . + 0 ID=cds-PDP40468.1;Parent=gene-CLI86_13985;Dbxref=NCBI_GP:PDP40468.1;Name=PDP40468.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;end_range=502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357952.1;locus_tag=CLI86_13985;partial=true;product=PTS mannitol transporter subunit IIA;protein_id=PDP40468.1;transl_table=11 ##sequence-region NSLJ01000115.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000115.1 Genbank region 1 497 . + . ID=NSLJ01000115.1:1..497;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000115.1 Genbank gene 285 497 . + . ID=gene-CLI86_13990;Name=CLI86_13990;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13990;partial=true NSLJ01000115.1 Protein Homology CDS 285 497 . + 0 ID=cds-PDP40460.1;Parent=gene-CLI86_13990;Dbxref=NCBI_GP:PDP40460.1;Name=PDP40460.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007564783.1;locus_tag=CLI86_13990;partial=true;product=DUF4372 domain-containing protein;protein_id=PDP40460.1;transl_table=11 ##sequence-region NSLJ01000116.1 1 496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000116.1 Genbank region 1 496 . + . ID=NSLJ01000116.1:1..496;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000117.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000117.1 Genbank region 1 487 . + . ID=NSLJ01000117.1:1..487;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000117.1 Genbank gene 1 487 . + . ID=gene-CLI86_13995;Name=CLI86_13995;end_range=487,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13995;partial=true;start_range=.,1 NSLJ01000117.1 GeneMarkS+ CDS 1 487 . + 2 ID=cds-PDP40453.1;Parent=gene-CLI86_13995;Dbxref=NCBI_GP:PDP40453.1;Name=PDP40453.1;end_range=487,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13995;partial=true;product=hypothetical protein;protein_id=PDP40453.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000118.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000118.1 Genbank region 1 479 . + . ID=NSLJ01000118.1:1..479;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000118.1 Genbank gene 4 192 . + . ID=gene-CLI86_14000;Name=CLI86_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14000 NSLJ01000118.1 Protein Homology CDS 4 192 . + 0 ID=cds-PDP40442.1;Parent=gene-CLI86_14000;Dbxref=NCBI_GP:PDP40442.1;Name=PDP40442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000220347.1;locus_tag=CLI86_14000;product=protein DltB;protein_id=PDP40442.1;transl_table=11 NSLJ01000118.1 Genbank gene 206 445 . + . ID=gene-CLI86_14005;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CLI86_14005 NSLJ01000118.1 Protein Homology CDS 206 445 . + 0 ID=cds-PDP40441.1;Parent=gene-CLI86_14005;Dbxref=NCBI_GP:PDP40441.1;Name=PDP40441.1;gbkey=CDS;gene=dltC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359571.1;locus_tag=CLI86_14005;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=PDP40441.1;transl_table=11 ##sequence-region NSLJ01000119.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000119.1 Genbank region 1 477 . + . ID=NSLJ01000119.1:1..477;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000119.1 Genbank gene 1 477 . + . ID=gene-CLI86_14010;Name=CLI86_14010;end_range=477,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14010;partial=true;start_range=.,1 NSLJ01000119.1 Protein Homology CDS 1 477 . + 1 ID=cds-PDP40437.1;Parent=gene-CLI86_14010;Dbxref=NCBI_GP:PDP40437.1;Name=PDP40437.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;end_range=477,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=CLI86_14010;partial=true;product=fructose-bisphosphate aldolase;protein_id=PDP40437.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000011.1 1 97097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000011.1 Genbank region 1 97097 . + . ID=NSLJ01000011.1:1..97097;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000011.1 Genbank gene 1515 2249 . - . ID=gene-CLI86_05520;Name=CLI86_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05520 NSLJ01000011.1 Protein Homology CDS 1515 2249 . - 0 ID=cds-PDP43979.1;Parent=gene-CLI86_05520;Dbxref=NCBI_GP:PDP43979.1;Name=PDP43979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013634377.1;locus_tag=CLI86_05520;product=hypothetical protein;protein_id=PDP43979.1;transl_table=11 NSLJ01000011.1 Genbank gene 2795 4954 . + . ID=gene-CLI86_05525;Name=CLI86_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05525 NSLJ01000011.1 Protein Homology CDS 2795 4954 . + 0 ID=cds-PDP43980.1;Parent=gene-CLI86_05525;Dbxref=NCBI_GP:PDP43980.1;Name=PDP43980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225325.1;locus_tag=CLI86_05525;product=aldolase;protein_id=PDP43980.1;transl_table=11 NSLJ01000011.1 Genbank gene 5122 5194 . + . ID=gene-CLI86_05530;Name=CLI86_05530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_05530 NSLJ01000011.1 tRNAscan-SE tRNA 5122 5194 . + . ID=rna-CLI86_05530;Parent=gene-CLI86_05530;anticodon=(pos:5155..5157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_05530;product=tRNA-Lys NSLJ01000011.1 tRNAscan-SE exon 5122 5194 . + . ID=exon-CLI86_05530-1;Parent=rna-CLI86_05530;anticodon=(pos:5155..5157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_05530;product=tRNA-Lys NSLJ01000011.1 Genbank gene 5802 9482 . + . ID=gene-CLI86_05535;Name=CLI86_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05535 NSLJ01000011.1 Protein Homology CDS 5802 9482 . + 0 ID=cds-PDP43981.1;Parent=gene-CLI86_05535;Dbxref=NCBI_GP:PDP43981.1;Name=PDP43981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644489.1;locus_tag=CLI86_05535;product=phosphoribosylformylglycinamidine synthase;protein_id=PDP43981.1;transl_table=11 NSLJ01000011.1 Genbank gene 9786 11321 . + . ID=gene-CLI86_05540;Name=CLI86_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05540 NSLJ01000011.1 Protein Homology CDS 9786 11321 . + 0 ID=cds-PDP43982.1;Parent=gene-CLI86_05540;Dbxref=NCBI_GP:PDP43982.1;Name=PDP43982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225328.1;locus_tag=CLI86_05540;product=sensor histidine kinase;protein_id=PDP43982.1;transl_table=11 NSLJ01000011.1 Genbank gene 11341 12066 . + . ID=gene-CLI86_05545;Name=CLI86_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05545 NSLJ01000011.1 Protein Homology CDS 11341 12066 . + 0 ID=cds-PDP43983.1;Parent=gene-CLI86_05545;Dbxref=NCBI_GP:PDP43983.1;Name=PDP43983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225329.1;locus_tag=CLI86_05545;product=DNA-binding response regulator;protein_id=PDP43983.1;transl_table=11 NSLJ01000011.1 Genbank gene 12234 12884 . - . ID=gene-CLI86_05550;Name=CLI86_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05550 NSLJ01000011.1 GeneMarkS+ CDS 12234 12884 . - 0 ID=cds-PDP43984.1;Parent=gene-CLI86_05550;Dbxref=NCBI_GP:PDP43984.1;Name=PDP43984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05550;product=hypothetical protein;protein_id=PDP43984.1;transl_table=11 NSLJ01000011.1 Genbank gene 13020 13718 . - . ID=gene-CLI86_05555;Name=CLI86_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05555 NSLJ01000011.1 Protein Homology CDS 13020 13718 . - 0 ID=cds-PDP43985.1;Parent=gene-CLI86_05555;Dbxref=NCBI_GP:PDP43985.1;Name=PDP43985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225331.1;locus_tag=CLI86_05555;product=M48 family peptidase;protein_id=PDP43985.1;transl_table=11 NSLJ01000011.1 Genbank gene 14076 14615 . + . ID=gene-CLI86_05560;Name=CLI86_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05560 NSLJ01000011.1 Protein Homology CDS 14076 14615 . + 0 ID=cds-PDP43986.1;Parent=gene-CLI86_05560;Dbxref=NCBI_GP:PDP43986.1;Name=PDP43986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225332.1;locus_tag=CLI86_05560;product=RNA polymerase sigma factor;protein_id=PDP43986.1;transl_table=11 NSLJ01000011.1 Genbank gene 14799 15794 . + . ID=gene-CLI86_05565;Name=CLI86_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05565 NSLJ01000011.1 Protein Homology CDS 14799 15794 . + 0 ID=cds-PDP43987.1;Parent=gene-CLI86_05565;Dbxref=NCBI_GP:PDP43987.1;Name=PDP43987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04773.11;locus_tag=CLI86_05565;product=iron dicitrate transport regulator FecR;protein_id=PDP43987.1;transl_table=11 NSLJ01000011.1 Genbank gene 15913 19347 . + . ID=gene-CLI86_05570;Name=CLI86_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05570 NSLJ01000011.1 Protein Homology CDS 15913 19347 . + 0 ID=cds-PDP43988.1;Parent=gene-CLI86_05570;Dbxref=NCBI_GP:PDP43988.1;Name=PDP43988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225334.1;locus_tag=CLI86_05570;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43988.1;transl_table=11 NSLJ01000011.1 Genbank gene 19372 21144 . + . ID=gene-CLI86_05575;Name=CLI86_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05575 NSLJ01000011.1 Protein Homology CDS 19372 21144 . + 0 ID=cds-PDP43989.1;Parent=gene-CLI86_05575;Dbxref=NCBI_GP:PDP43989.1;Name=PDP43989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225335.1;locus_tag=CLI86_05575;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43989.1;transl_table=11 NSLJ01000011.1 Genbank gene 21187 22473 . + . ID=gene-CLI86_05580;Name=CLI86_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05580 NSLJ01000011.1 Protein Homology CDS 21187 22473 . + 0 ID=cds-PDP44043.1;Parent=gene-CLI86_05580;Dbxref=NCBI_GP:PDP44043.1;Name=PDP44043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225336.1;locus_tag=CLI86_05580;product=hypothetical protein;protein_id=PDP44043.1;transl_table=11 NSLJ01000011.1 Genbank gene 22603 23367 . - . ID=gene-CLI86_05585;Name=CLI86_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05585 NSLJ01000011.1 Protein Homology CDS 22603 23367 . - 0 ID=cds-PDP43990.1;Parent=gene-CLI86_05585;Dbxref=NCBI_GP:PDP43990.1;Name=PDP43990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225337.1;locus_tag=CLI86_05585;product=NAD(P)-dependent oxidoreductase;protein_id=PDP43990.1;transl_table=11 NSLJ01000011.1 Genbank gene 23707 24267 . + . ID=gene-CLI86_05590;Name=CLI86_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05590 NSLJ01000011.1 GeneMarkS+ CDS 23707 24267 . + 0 ID=cds-PDP43991.1;Parent=gene-CLI86_05590;Dbxref=NCBI_GP:PDP43991.1;Name=PDP43991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05590;product=hypothetical protein;protein_id=PDP43991.1;transl_table=11 NSLJ01000011.1 Genbank gene 24455 26494 . + . ID=gene-CLI86_05595;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CLI86_05595 NSLJ01000011.1 Protein Homology CDS 24455 26494 . + 0 ID=cds-PDP43992.1;Parent=gene-CLI86_05595;Dbxref=NCBI_GP:PDP43992.1;Name=PDP43992.1;gbkey=CDS;gene=ppk1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225340.1;locus_tag=CLI86_05595;product=polyphosphate kinase 1;protein_id=PDP43992.1;transl_table=11 NSLJ01000011.1 Genbank gene 26491 27837 . - . ID=gene-CLI86_05600;Name=CLI86_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05600 NSLJ01000011.1 Protein Homology CDS 26491 27837 . - 0 ID=cds-PDP43993.1;Parent=gene-CLI86_05600;Dbxref=NCBI_GP:PDP43993.1;Name=PDP43993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225341.1;locus_tag=CLI86_05600;product=rRNA cytosine-C5-methyltransferase;protein_id=PDP43993.1;transl_table=11 NSLJ01000011.1 Genbank gene 27886 29709 . - . ID=gene-CLI86_05605;Name=CLI86_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05605 NSLJ01000011.1 Protein Homology CDS 27886 29709 . - 0 ID=cds-PDP43994.1;Parent=gene-CLI86_05605;Dbxref=NCBI_GP:PDP43994.1;Name=PDP43994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225342.1;locus_tag=CLI86_05605;product=arylsulfatase;protein_id=PDP43994.1;transl_table=11 NSLJ01000011.1 Genbank gene 29857 30468 . + . ID=gene-CLI86_05610;Name=CLI86_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05610 NSLJ01000011.1 Protein Homology CDS 29857 30468 . + 0 ID=cds-PDP43995.1;Parent=gene-CLI86_05610;Dbxref=NCBI_GP:PDP43995.1;Name=PDP43995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634856.1;locus_tag=CLI86_05610;product=peptidylprolyl isomerase;protein_id=PDP43995.1;transl_table=11 NSLJ01000011.1 Genbank gene 30487 31575 . + . ID=gene-CLI86_05615;Name=CLI86_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05615 NSLJ01000011.1 Protein Homology CDS 30487 31575 . + 0 ID=cds-PDP43996.1;Parent=gene-CLI86_05615;Dbxref=NCBI_GP:PDP43996.1;Name=PDP43996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225344.1;locus_tag=CLI86_05615;product=chorismate synthase;protein_id=PDP43996.1;transl_table=11 NSLJ01000011.1 Genbank gene 31552 33003 . - . ID=gene-CLI86_05620;Name=CLI86_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05620 NSLJ01000011.1 Protein Homology CDS 31552 33003 . - 0 ID=cds-PDP43997.1;Parent=gene-CLI86_05620;Dbxref=NCBI_GP:PDP43997.1;Name=PDP43997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03572.16;locus_tag=CLI86_05620;product=hypothetical protein;protein_id=PDP43997.1;transl_table=11 NSLJ01000011.1 Genbank gene 33143 33385 . - . ID=gene-CLI86_05625;Name=CLI86_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05625 NSLJ01000011.1 Protein Homology CDS 33143 33385 . - 0 ID=cds-PDP43998.1;Parent=gene-CLI86_05625;Dbxref=NCBI_GP:PDP43998.1;Name=PDP43998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861240.1;locus_tag=CLI86_05625;product=DUF4834 domain-containing protein;protein_id=PDP43998.1;transl_table=11 NSLJ01000011.1 Genbank gene 33906 34946 . + . ID=gene-CLI86_05630;Name=CLI86_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05630 NSLJ01000011.1 Protein Homology CDS 33906 34946 . + 0 ID=cds-PDP43999.1;Parent=gene-CLI86_05630;Dbxref=NCBI_GP:PDP43999.1;Name=PDP43999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_05630;product=6-bladed beta-propeller;protein_id=PDP43999.1;transl_table=11 NSLJ01000011.1 Genbank gene 34998 36317 . - . ID=gene-CLI86_05635;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CLI86_05635 NSLJ01000011.1 Protein Homology CDS 34998 36317 . - 0 ID=cds-PDP44000.1;Parent=gene-CLI86_05635;Dbxref=NCBI_GP:PDP44000.1;Name=PDP44000.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225348.1;locus_tag=CLI86_05635;product=RIP metalloprotease RseP;protein_id=PDP44000.1;transl_table=11 NSLJ01000011.1 Genbank gene 36426 37580 . - . ID=gene-CLI86_05640;Name=CLI86_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05640 NSLJ01000011.1 Protein Homology CDS 36426 37580 . - 0 ID=cds-PDP44001.1;Parent=gene-CLI86_05640;Dbxref=NCBI_GP:PDP44001.1;Name=PDP44001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225350.1;locus_tag=CLI86_05640;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=PDP44001.1;transl_table=11 NSLJ01000011.1 Genbank gene 37587 38465 . - . ID=gene-CLI86_05645;Name=CLI86_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05645 NSLJ01000011.1 Protein Homology CDS 37587 38465 . - 0 ID=cds-PDP44002.1;Parent=gene-CLI86_05645;Dbxref=NCBI_GP:PDP44002.1;Name=PDP44002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933300.1;locus_tag=CLI86_05645;product=peptidase M23;protein_id=PDP44002.1;transl_table=11 NSLJ01000011.1 Genbank gene 38470 38991 . - . ID=gene-CLI86_05650;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CLI86_05650 NSLJ01000011.1 Protein Homology CDS 38470 38991 . - 0 ID=cds-PDP44044.1;Parent=gene-CLI86_05650;Dbxref=NCBI_GP:PDP44044.1;Name=PDP44044.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780929.1;locus_tag=CLI86_05650;product=16S rRNA processing protein RimM;protein_id=PDP44044.1;transl_table=11 NSLJ01000011.1 Genbank gene 39185 39793 . - . ID=gene-CLI86_05655;Name=CLI86_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05655 NSLJ01000011.1 Protein Homology CDS 39185 39793 . - 0 ID=cds-PDP44003.1;Parent=gene-CLI86_05655;Dbxref=NCBI_GP:PDP44003.1;Name=PDP44003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225353.1;locus_tag=CLI86_05655;product=DUF4290 domain-containing protein;protein_id=PDP44003.1;transl_table=11 NSLJ01000011.1 Genbank gene 39795 39983 . - . ID=gene-CLI86_05660;Name=CLI86_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05660 NSLJ01000011.1 GeneMarkS+ CDS 39795 39983 . - 0 ID=cds-PDP44004.1;Parent=gene-CLI86_05660;Dbxref=NCBI_GP:PDP44004.1;Name=PDP44004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05660;product=hypothetical protein;protein_id=PDP44004.1;transl_table=11 NSLJ01000011.1 Genbank gene 40007 41548 . + . ID=gene-CLI86_05665;Name=CLI86_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05665 NSLJ01000011.1 Protein Homology CDS 40007 41548 . + 0 ID=cds-PDP44005.1;Parent=gene-CLI86_05665;Dbxref=NCBI_GP:PDP44005.1;Name=PDP44005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13667.4;locus_tag=CLI86_05665;product=phosphomethylpyrimidine synthase;protein_id=PDP44005.1;transl_table=11 NSLJ01000011.1 Genbank gene 41573 43693 . + . ID=gene-CLI86_05670;Name=CLI86_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05670 NSLJ01000011.1 Protein Homology CDS 41573 43693 . + 0 ID=cds-PDP44006.1;Parent=gene-CLI86_05670;Dbxref=NCBI_GP:PDP44006.1;Name=PDP44006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225356.1;locus_tag=CLI86_05670;product=RNA-binding transcriptional accessory protein;protein_id=PDP44006.1;transl_table=11 NSLJ01000011.1 Genbank gene 43897 45141 . - . ID=gene-CLI86_05675;Name=CLI86_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05675 NSLJ01000011.1 Protein Homology CDS 43897 45141 . - 0 ID=cds-PDP44007.1;Parent=gene-CLI86_05675;Dbxref=NCBI_GP:PDP44007.1;Name=PDP44007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225358.1;locus_tag=CLI86_05675;product=hypothetical protein;protein_id=PDP44007.1;transl_table=11 NSLJ01000011.1 Genbank gene 45325 46407 . + . ID=gene-CLI86_05680;Name=CLI86_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05680 NSLJ01000011.1 Protein Homology CDS 45325 46407 . + 0 ID=cds-PDP44008.1;Parent=gene-CLI86_05680;Dbxref=NCBI_GP:PDP44008.1;Name=PDP44008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008774259.1;locus_tag=CLI86_05680;product=galactose-1-epimerase;protein_id=PDP44008.1;transl_table=11 NSLJ01000011.1 Genbank gene 46451 47761 . + . ID=gene-CLI86_05685;Name=CLI86_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05685 NSLJ01000011.1 Protein Homology CDS 46451 47761 . + 0 ID=cds-PDP44009.1;Parent=gene-CLI86_05685;Dbxref=NCBI_GP:PDP44009.1;Name=PDP44009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014775466.1;locus_tag=CLI86_05685;product=MFS transporter;protein_id=PDP44009.1;transl_table=11 NSLJ01000011.1 Genbank gene 47837 48976 . + . ID=gene-CLI86_05690;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CLI86_05690 NSLJ01000011.1 Protein Homology CDS 47837 48976 . + 0 ID=cds-PDP44010.1;Parent=gene-CLI86_05690;Dbxref=NCBI_GP:PDP44010.1;Name=PDP44010.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225361.1;locus_tag=CLI86_05690;product=galactokinase;protein_id=PDP44010.1;transl_table=11 NSLJ01000011.1 Genbank gene 49223 50509 . + . ID=gene-CLI86_05695;Name=CLI86_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05695 NSLJ01000011.1 Protein Homology CDS 49223 50509 . + 0 ID=cds-PDP44045.1;Parent=gene-CLI86_05695;Dbxref=NCBI_GP:PDP44045.1;Name=PDP44045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646468.1;locus_tag=CLI86_05695;product=peptidase M64;protein_id=PDP44045.1;transl_table=11 NSLJ01000011.1 Genbank gene 50515 52404 . - . ID=gene-CLI86_05700;Name=CLI86_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05700 NSLJ01000011.1 Protein Homology CDS 50515 52404 . - 0 ID=cds-PDP44011.1;Parent=gene-CLI86_05700;Dbxref=NCBI_GP:PDP44011.1;Name=PDP44011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225363.1;locus_tag=CLI86_05700;product=ABC transporter;protein_id=PDP44011.1;transl_table=11 NSLJ01000011.1 Genbank gene 52439 53926 . - . ID=gene-CLI86_05705;Name=CLI86_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05705 NSLJ01000011.1 Protein Homology CDS 52439 53926 . - 0 ID=cds-PDP44012.1;Parent=gene-CLI86_05705;Dbxref=NCBI_GP:PDP44012.1;Name=PDP44012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008148952.1;locus_tag=CLI86_05705;product=inosine 5-monophosphate dehydrogenase;protein_id=PDP44012.1;transl_table=11 NSLJ01000011.1 Genbank gene 54146 56536 . - . ID=gene-CLI86_05710;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CLI86_05710 NSLJ01000011.1 Protein Homology CDS 54146 56536 . - 0 ID=cds-PDP44013.1;Parent=gene-CLI86_05710;Dbxref=NCBI_GP:PDP44013.1;Name=PDP44013.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010417606.1;locus_tag=CLI86_05710;product=ferrous iron transport protein B;protein_id=PDP44013.1;transl_table=11 NSLJ01000011.1 Genbank gene 56709 57104 . - . ID=gene-CLI86_05715;Name=CLI86_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05715 NSLJ01000011.1 Protein Homology CDS 56709 57104 . - 0 ID=cds-PDP44046.1;Parent=gene-CLI86_05715;Dbxref=NCBI_GP:PDP44046.1;Name=PDP44046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640785.1;locus_tag=CLI86_05715;product=hypothetical protein;protein_id=PDP44046.1;transl_table=11 NSLJ01000011.1 Genbank gene 57140 57346 . - . ID=gene-CLI86_05720;Name=CLI86_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05720 NSLJ01000011.1 GeneMarkS+ CDS 57140 57346 . - 0 ID=cds-PDP44014.1;Parent=gene-CLI86_05720;Dbxref=NCBI_GP:PDP44014.1;Name=PDP44014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05720;product=hypothetical protein;protein_id=PDP44014.1;transl_table=11 NSLJ01000011.1 Genbank gene 57478 58575 . + . ID=gene-CLI86_05725;Name=CLI86_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05725 NSLJ01000011.1 Protein Homology CDS 57478 58575 . + 0 ID=cds-PDP44015.1;Parent=gene-CLI86_05725;Dbxref=NCBI_GP:PDP44015.1;Name=PDP44015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225367.1;locus_tag=CLI86_05725;product=histidine kinase;protein_id=PDP44015.1;transl_table=11 NSLJ01000011.1 Genbank gene 58594 59343 . + . ID=gene-CLI86_05730;Name=CLI86_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05730 NSLJ01000011.1 Protein Homology CDS 58594 59343 . + 0 ID=cds-PDP44016.1;Parent=gene-CLI86_05730;Dbxref=NCBI_GP:PDP44016.1;Name=PDP44016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225368.1;locus_tag=CLI86_05730;product=DNA-binding response regulator;protein_id=PDP44016.1;transl_table=11 NSLJ01000011.1 Genbank gene 59780 59902 . + . ID=gene-CLI86_05735;Name=CLI86_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05735 NSLJ01000011.1 Protein Homology CDS 59780 59902 . + 0 ID=cds-PDP44047.1;Parent=gene-CLI86_05735;Dbxref=NCBI_GP:PDP44047.1;Name=PDP44047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375892.1;locus_tag=CLI86_05735;product=glycine cleavage system H protein;protein_id=PDP44047.1;transl_table=11 NSLJ01000011.1 Genbank pseudogene 59903 60096 . + . ID=gene-CLI86_05740;Name=CLI86_05740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_05740;pseudo=true NSLJ01000011.1 Protein Homology CDS 59903 60096 . + 0 ID=cds-CLI86_05740;Parent=gene-CLI86_05740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005945450.1;locus_tag=CLI86_05740;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000011.1 Genbank gene 60428 60637 . + . ID=gene-CLI86_05745;Name=CLI86_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05745 NSLJ01000011.1 Protein Homology CDS 60428 60637 . + 0 ID=cds-PDP44017.1;Parent=gene-CLI86_05745;Dbxref=NCBI_GP:PDP44017.1;Name=PDP44017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375890.1;locus_tag=CLI86_05745;product=hypothetical protein;protein_id=PDP44017.1;transl_table=11 NSLJ01000011.1 Genbank gene 60650 60868 . + . ID=gene-CLI86_05750;Name=CLI86_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05750 NSLJ01000011.1 Protein Homology CDS 60650 60868 . + 0 ID=cds-PDP44018.1;Parent=gene-CLI86_05750;Dbxref=NCBI_GP:PDP44018.1;Name=PDP44018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584361.1;locus_tag=CLI86_05750;product=hypothetical protein;protein_id=PDP44018.1;transl_table=11 NSLJ01000011.1 Genbank gene 60880 61161 . + . ID=gene-CLI86_05755;Name=CLI86_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05755 NSLJ01000011.1 Protein Homology CDS 60880 61161 . + 0 ID=cds-PDP44019.1;Parent=gene-CLI86_05755;Dbxref=NCBI_GP:PDP44019.1;Name=PDP44019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847791.1;locus_tag=CLI86_05755;product=hypothetical protein;protein_id=PDP44019.1;transl_table=11 NSLJ01000011.1 Genbank gene 61174 61764 . + . ID=gene-CLI86_05760;Name=CLI86_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05760 NSLJ01000011.1 Protein Homology CDS 61174 61764 . + 0 ID=cds-PDP44020.1;Parent=gene-CLI86_05760;Dbxref=NCBI_GP:PDP44020.1;Name=PDP44020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341685.1;locus_tag=CLI86_05760;product=hypothetical protein;protein_id=PDP44020.1;transl_table=11 NSLJ01000011.1 Genbank pseudogene 61782 62165 . + . ID=gene-CLI86_05765;Name=CLI86_05765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_05765;pseudo=true NSLJ01000011.1 Protein Homology CDS 61782 62165 . + 0 ID=cds-CLI86_05765;Parent=gene-CLI86_05765;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227183.1;locus_tag=CLI86_05765;product=PcfK-like protein;pseudo=true;transl_table=11 NSLJ01000011.1 Genbank pseudogene 62214 62366 . + . ID=gene-CLI86_05770;Name=CLI86_05770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_05770;pseudo=true NSLJ01000011.1 Protein Homology CDS 62214 62366 . + 0 ID=cds-CLI86_05770;Parent=gene-CLI86_05770;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346325.1;locus_tag=CLI86_05770;product=PcfJ-like protein;pseudo=true;transl_table=11 NSLJ01000011.1 Genbank gene 62393 62647 . + . ID=gene-CLI86_05775;Name=CLI86_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05775 NSLJ01000011.1 Protein Homology CDS 62393 62647 . + 0 ID=cds-PDP44021.1;Parent=gene-CLI86_05775;Dbxref=NCBI_GP:PDP44021.1;Name=PDP44021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1;locus_tag=CLI86_05775;product=hypothetical protein;protein_id=PDP44021.1;transl_table=11 NSLJ01000011.1 Genbank gene 62652 62882 . + . ID=gene-CLI86_05780;Name=CLI86_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05780 NSLJ01000011.1 Protein Homology CDS 62652 62882 . + 0 ID=cds-PDP44022.1;Parent=gene-CLI86_05780;Dbxref=NCBI_GP:PDP44022.1;Name=PDP44022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847779.1;locus_tag=CLI86_05780;product=hypothetical protein;protein_id=PDP44022.1;transl_table=11 NSLJ01000011.1 Genbank gene 63509 64405 . - . ID=gene-CLI86_05785;Name=CLI86_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05785 NSLJ01000011.1 Protein Homology CDS 63509 64405 . - 0 ID=cds-PDP44023.1;Parent=gene-CLI86_05785;Dbxref=NCBI_GP:PDP44023.1;Name=PDP44023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584209.1;locus_tag=CLI86_05785;product=carbohydrate kinase;protein_id=PDP44023.1;transl_table=11 NSLJ01000011.1 Genbank gene 64423 65226 . - . ID=gene-CLI86_05790;Name=CLI86_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05790 NSLJ01000011.1 Protein Homology CDS 64423 65226 . - 0 ID=cds-PDP44024.1;Parent=gene-CLI86_05790;Dbxref=NCBI_GP:PDP44024.1;Name=PDP44024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225378.1;locus_tag=CLI86_05790;product=nucleotidyltransferase;protein_id=PDP44024.1;transl_table=11 NSLJ01000011.1 Genbank gene 65223 66029 . - . ID=gene-CLI86_05795;Name=CLI86_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05795 NSLJ01000011.1 Protein Homology CDS 65223 66029 . - 0 ID=cds-PDP44025.1;Parent=gene-CLI86_05795;Dbxref=NCBI_GP:PDP44025.1;Name=PDP44025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584211.1;locus_tag=CLI86_05795;product=hypothetical protein;protein_id=PDP44025.1;transl_table=11 NSLJ01000011.1 Genbank gene 66145 67254 . - . ID=gene-CLI86_05800;Name=CLI86_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05800 NSLJ01000011.1 Protein Homology CDS 66145 67254 . - 0 ID=cds-PDP44026.1;Parent=gene-CLI86_05800;Dbxref=NCBI_GP:PDP44026.1;Name=PDP44026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584212.1;locus_tag=CLI86_05800;product=hypothetical protein;protein_id=PDP44026.1;transl_table=11 NSLJ01000011.1 Genbank gene 67264 69114 . - . ID=gene-CLI86_05805;Name=CLI86_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05805 NSLJ01000011.1 Protein Homology CDS 67264 69114 . - 0 ID=cds-PDP44027.1;Parent=gene-CLI86_05805;Dbxref=NCBI_GP:PDP44027.1;Name=PDP44027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008026123.1;locus_tag=CLI86_05805;product=hypothetical protein;protein_id=PDP44027.1;transl_table=11 NSLJ01000011.1 Genbank gene 69123 70286 . - . ID=gene-CLI86_05810;Name=CLI86_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05810 NSLJ01000011.1 Protein Homology CDS 69123 70286 . - 0 ID=cds-PDP44028.1;Parent=gene-CLI86_05810;Dbxref=NCBI_GP:PDP44028.1;Name=PDP44028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008026122.1;locus_tag=CLI86_05810;product=hypothetical protein;protein_id=PDP44028.1;transl_table=11 NSLJ01000011.1 Genbank gene 70283 72178 . - . ID=gene-CLI86_05815;Name=CLI86_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05815 NSLJ01000011.1 Protein Homology CDS 70283 72178 . - 0 ID=cds-PDP44029.1;Parent=gene-CLI86_05815;Dbxref=NCBI_GP:PDP44029.1;Name=PDP44029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584215.1;locus_tag=CLI86_05815;product=haloacid dehalogenase-like hydrolase;protein_id=PDP44029.1;transl_table=11 NSLJ01000011.1 Genbank gene 72325 73890 . + . ID=gene-CLI86_05820;Name=CLI86_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05820 NSLJ01000011.1 Protein Homology CDS 72325 73890 . + 0 ID=cds-PDP44030.1;Parent=gene-CLI86_05820;Dbxref=NCBI_GP:PDP44030.1;Name=PDP44030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005934183.1;locus_tag=CLI86_05820;product=ferredoxin;protein_id=PDP44030.1;transl_table=11 NSLJ01000011.1 Genbank gene 73911 75053 . + . ID=gene-CLI86_05825;Name=CLI86_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05825 NSLJ01000011.1 Protein Homology CDS 73911 75053 . + 0 ID=cds-PDP44031.1;Parent=gene-CLI86_05825;Dbxref=NCBI_GP:PDP44031.1;Name=PDP44031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225383.1;locus_tag=CLI86_05825;product=aldo/keto reductase;protein_id=PDP44031.1;transl_table=11 NSLJ01000011.1 Genbank gene 75198 76478 . - . ID=gene-CLI86_05830;Name=CLI86_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05830 NSLJ01000011.1 Protein Homology CDS 75198 76478 . - 0 ID=cds-PDP44032.1;Parent=gene-CLI86_05830;Dbxref=NCBI_GP:PDP44032.1;Name=PDP44032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008760327.1;locus_tag=CLI86_05830;product=phosphopyruvate hydratase;protein_id=PDP44032.1;transl_table=11 NSLJ01000011.1 Genbank gene 76575 76943 . - . ID=gene-CLI86_05835;Name=CLI86_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05835 NSLJ01000011.1 Protein Homology CDS 76575 76943 . - 0 ID=cds-PDP44033.1;Parent=gene-CLI86_05835;Dbxref=NCBI_GP:PDP44033.1;Name=PDP44033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225385.1;locus_tag=CLI86_05835;product=DUF2023 domain-containing protein;protein_id=PDP44033.1;transl_table=11 NSLJ01000011.1 Genbank gene 76955 77449 . - . ID=gene-CLI86_05840;Name=CLI86_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05840 NSLJ01000011.1 Protein Homology CDS 76955 77449 . - 0 ID=cds-PDP44034.1;Parent=gene-CLI86_05840;Dbxref=NCBI_GP:PDP44034.1;Name=PDP44034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225386.1;locus_tag=CLI86_05840;product=flavodoxin FldA;protein_id=PDP44034.1;transl_table=11 NSLJ01000011.1 Genbank gene 77727 78053 . - . ID=gene-CLI86_05845;Name=CLI86_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05845 NSLJ01000011.1 Protein Homology CDS 77727 78053 . - 0 ID=cds-PDP44035.1;Parent=gene-CLI86_05845;Dbxref=NCBI_GP:PDP44035.1;Name=PDP44035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005657078.1;locus_tag=CLI86_05845;product=DUF2149 domain-containing protein;protein_id=PDP44035.1;transl_table=11 NSLJ01000011.1 Genbank gene 78050 78652 . - . ID=gene-CLI86_05850;Name=CLI86_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05850 NSLJ01000011.1 Protein Homology CDS 78050 78652 . - 0 ID=cds-PDP44036.1;Parent=gene-CLI86_05850;Dbxref=NCBI_GP:PDP44036.1;Name=PDP44036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225389.1;locus_tag=CLI86_05850;product=hypothetical protein;protein_id=PDP44036.1;transl_table=11 NSLJ01000011.1 Genbank gene 78649 79353 . - . ID=gene-CLI86_05855;Name=CLI86_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05855 NSLJ01000011.1 Protein Homology CDS 78649 79353 . - 0 ID=cds-PDP44037.1;Parent=gene-CLI86_05855;Dbxref=NCBI_GP:PDP44037.1;Name=PDP44037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225390.1;locus_tag=CLI86_05855;product=hypothetical protein;protein_id=PDP44037.1;transl_table=11 NSLJ01000011.1 Genbank gene 79355 83740 . - . ID=gene-CLI86_05860;Name=CLI86_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05860 NSLJ01000011.1 Protein Homology CDS 79355 83740 . - 0 ID=cds-PDP44038.1;Parent=gene-CLI86_05860;Dbxref=NCBI_GP:PDP44038.1;Name=PDP44038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007844758.1;locus_tag=CLI86_05860;product=protoporphyrin IX magnesium chelatase;protein_id=PDP44038.1;transl_table=11 NSLJ01000011.1 Genbank gene 83768 86014 . - . ID=gene-CLI86_05865;Name=CLI86_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05865 NSLJ01000011.1 Protein Homology CDS 83768 86014 . - 0 ID=cds-PDP44048.1;Parent=gene-CLI86_05865;Dbxref=NCBI_GP:PDP44048.1;Name=PDP44048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225392.1;locus_tag=CLI86_05865;product=TonB-dependent receptor;protein_id=PDP44048.1;transl_table=11 NSLJ01000011.1 Genbank gene 86132 88366 . - . ID=gene-CLI86_05870;Name=CLI86_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05870 NSLJ01000011.1 Protein Homology CDS 86132 88366 . - 0 ID=cds-PDP44039.1;Parent=gene-CLI86_05870;Dbxref=NCBI_GP:PDP44039.1;Name=PDP44039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016661761.1;locus_tag=CLI86_05870;product=TonB-dependent receptor;protein_id=PDP44039.1;transl_table=11 NSLJ01000011.1 Genbank gene 88380 89030 . - . ID=gene-CLI86_05875;Name=CLI86_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05875 NSLJ01000011.1 Protein Homology CDS 88380 89030 . - 0 ID=cds-PDP44040.1;Parent=gene-CLI86_05875;Dbxref=NCBI_GP:PDP44040.1;Name=PDP44040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14064.4;locus_tag=CLI86_05875;product=hypothetical protein;protein_id=PDP44040.1;transl_table=11 NSLJ01000011.1 Genbank gene 89076 90617 . - . ID=gene-CLI86_05880;Name=CLI86_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05880 NSLJ01000011.1 GeneMarkS+ CDS 89076 90617 . - 0 ID=cds-PDP44041.1;Parent=gene-CLI86_05880;Dbxref=NCBI_GP:PDP44041.1;Name=PDP44041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05880;product=hypothetical protein;protein_id=PDP44041.1;transl_table=11 NSLJ01000011.1 Genbank gene 91528 94068 . + . ID=gene-CLI86_05885;Name=CLI86_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05885 NSLJ01000011.1 Protein Homology CDS 91528 94068 . + 0 ID=cds-PDP44042.1;Parent=gene-CLI86_05885;Dbxref=NCBI_GP:PDP44042.1;Name=PDP44042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225397.1;locus_tag=CLI86_05885;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=PDP44042.1;transl_table=11 NSLJ01000011.1 Genbank gene 94122 95165 . + . ID=gene-CLI86_05890;Name=CLI86_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05890 NSLJ01000011.1 Protein Homology CDS 94122 95165 . + 0 ID=cds-PDP44049.1;Parent=gene-CLI86_05890;Dbxref=NCBI_GP:PDP44049.1;Name=PDP44049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009608766.1;locus_tag=CLI86_05890;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=PDP44049.1;transl_table=11 NSLJ01000011.1 Genbank gene 95949 97097 . + . ID=gene-CLI86_05895;Name=CLI86_05895;end_range=97097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05895;partial=true NSLJ01000011.1 Protein Homology CDS 95949 97097 . + 0 ID=cds-PDP44050.1;Parent=gene-CLI86_05895;Dbxref=NCBI_GP:PDP44050.1;Name=PDP44050.1;end_range=97097,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225399.1;locus_tag=CLI86_05895;partial=true;product=hypothetical protein;protein_id=PDP44050.1;transl_table=11 ##sequence-region NSLJ01000120.1 1 449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000120.1 Genbank region 1 449 . + . ID=NSLJ01000120.1:1..449;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000120.1 Genbank gene 36 449 . + . ID=gene-CLI86_14015;Name=CLI86_14015;end_range=449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14015;partial=true NSLJ01000120.1 Protein Homology CDS 36 449 . + 0 ID=cds-PDP40430.1;Parent=gene-CLI86_14015;Dbxref=NCBI_GP:PDP40430.1;Name=PDP40430.1;end_range=449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358882.1;locus_tag=CLI86_14015;partial=true;product=ABC transporter ATP-binding protein;protein_id=PDP40430.1;transl_table=11 ##sequence-region NSLJ01000121.1 1 440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000121.1 Genbank region 1 440 . + . ID=NSLJ01000121.1:1..440;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000121.1 Genbank gene 1 440 . - . ID=gene-CLI86_14020;Name=pstB;end_range=440,.;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CLI86_14020;partial=true;start_range=.,1 NSLJ01000121.1 Protein Homology CDS 1 440 . - 0 ID=cds-PDP40425.1;Parent=gene-CLI86_14020;Dbxref=NCBI_GP:PDP40425.1;Name=PDP40425.1;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;end_range=440,.;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003101281.1;locus_tag=CLI86_14020;partial=true;product=phosphate ABC transporter ATP-binding protein;protein_id=PDP40425.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000122.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000122.1 Genbank region 1 431 . + . ID=NSLJ01000122.1:1..431;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000122.1 Genbank pseudogene 1 182 . + . ID=gene-CLI86_14025;Name=CLI86_14025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_14025;pseudo=true NSLJ01000122.1 Protein Homology CDS 1 182 . + 0 ID=cds-CLI86_14025;Parent=gene-CLI86_14025;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359104.1;locus_tag=CLI86_14025;product=cell division protein FtsA;pseudo=true;transl_table=11 NSLJ01000122.1 Genbank gene 199 431 . + . ID=gene-CLI86_14030;Name=CLI86_14030;end_range=431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14030;partial=true NSLJ01000122.1 Protein Homology CDS 199 431 . + 0 ID=cds-PDP40421.1;Parent=gene-CLI86_14030;Dbxref=NCBI_GP:PDP40421.1;Name=PDP40421.1;end_range=431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359103.1;locus_tag=CLI86_14030;partial=true;product=cell division protein FtsZ;protein_id=PDP40421.1;transl_table=11 ##sequence-region NSLJ01000123.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000123.1 Genbank region 1 430 . + . ID=NSLJ01000123.1:1..430;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000123.1 Genbank gene 2 430 . - . ID=gene-CLI86_14035;Name=CLI86_14035;end_range=430,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI86_14035;partial=true NSLJ01000123.1 Genbank rRNA 2 430 . - . ID=rna-CLI86_14035;Parent=gene-CLI86_14035;end_range=430,.;gbkey=rRNA;locus_tag=CLI86_14035;partial=true;product=23S ribosomal RNA NSLJ01000123.1 Genbank exon 2 430 . - . ID=exon-CLI86_14035-1;Parent=rna-CLI86_14035;end_range=430,.;gbkey=rRNA;locus_tag=CLI86_14035;partial=true;product=23S ribosomal RNA ##sequence-region NSLJ01000124.1 1 409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000124.1 Genbank region 1 409 . + . ID=NSLJ01000124.1:1..409;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000125.1 1 386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000125.1 Genbank region 1 386 . + . ID=NSLJ01000125.1:1..386;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000125.1 Genbank gene 112 386 . + . ID=gene-CLI86_14040;Name=CLI86_14040;end_range=386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14040;partial=true NSLJ01000125.1 Protein Homology CDS 112 386 . + 0 ID=cds-PDP40409.1;Parent=gene-CLI86_14040;Dbxref=NCBI_GP:PDP40409.1;Name=PDP40409.1;end_range=386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005652485.1;locus_tag=CLI86_14040;partial=true;product=IS110 family transposase;protein_id=PDP40409.1;transl_table=11 ##sequence-region NSLJ01000126.1 1 353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000126.1 Genbank region 1 353 . + . ID=NSLJ01000126.1:1..353;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000126.1 Genbank gene 1 353 . + . ID=gene-CLI86_14045;Name=CLI86_14045;end_range=353,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14045;partial=true;start_range=.,1 NSLJ01000126.1 Protein Homology CDS 1 353 . + 2 ID=cds-PDP40183.1;Parent=gene-CLI86_14045;Dbxref=NCBI_GP:PDP40183.1;Name=PDP40183.1;end_range=353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_14045;partial=true;product=hypothetical protein;protein_id=PDP40183.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000127.1 1 349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000127.1 Genbank region 1 349 . + . ID=NSLJ01000127.1:1..349;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000127.1 Genbank gene 1 349 . + . ID=gene-CLI86_14050;Name=CLI86_14050;end_range=349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14050;partial=true;start_range=.,1 NSLJ01000127.1 GeneMarkS+ CDS 1 349 . + 0 ID=cds-PDP40177.1;Parent=gene-CLI86_14050;Dbxref=NCBI_GP:PDP40177.1;Name=PDP40177.1;end_range=349,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_14050;partial=true;product=hypothetical protein;protein_id=PDP40177.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000128.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000128.1 Genbank region 1 321 . + . ID=NSLJ01000128.1:1..321;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000128.1 Genbank gene 1 214 . + . ID=gene-CLI86_14055;Name=CLI86_14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14055;partial=true;start_range=.,1 NSLJ01000128.1 Protein Homology CDS 1 214 . + 1 ID=cds-PDP40171.1;Parent=gene-CLI86_14055;Dbxref=NCBI_GP:PDP40171.1;Name=PDP40171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03400.11;locus_tag=CLI86_14055;partial=true;product=IS1 family transposase;protein_id=PDP40171.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000012.1 1 96043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000012.1 Genbank region 1 96043 . + . ID=NSLJ01000012.1:1..96043;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000012.1 Genbank gene 120 302 . + . ID=gene-CLI86_05900;Name=CLI86_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05900 NSLJ01000012.1 GeneMarkS+ CDS 120 302 . + 0 ID=cds-PDP43894.1;Parent=gene-CLI86_05900;Dbxref=NCBI_GP:PDP43894.1;Name=PDP43894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05900;product=hypothetical protein;protein_id=PDP43894.1;transl_table=11 NSLJ01000012.1 Genbank gene 663 1853 . + . ID=gene-CLI86_05905;Name=CLI86_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05905 NSLJ01000012.1 Protein Homology CDS 663 1853 . + 0 ID=cds-PDP43895.1;Parent=gene-CLI86_05905;Dbxref=NCBI_GP:PDP43895.1;Name=PDP43895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05147.11;locus_tag=CLI86_05905;product=hypothetical protein;protein_id=PDP43895.1;transl_table=11 NSLJ01000012.1 Genbank gene 1877 2251 . + . ID=gene-CLI86_05910;Name=CLI86_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05910 NSLJ01000012.1 GeneMarkS+ CDS 1877 2251 . + 0 ID=cds-PDP43896.1;Parent=gene-CLI86_05910;Dbxref=NCBI_GP:PDP43896.1;Name=PDP43896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05910;product=hypothetical protein;protein_id=PDP43896.1;transl_table=11 NSLJ01000012.1 Genbank gene 2490 4760 . + . ID=gene-CLI86_05915;Name=CLI86_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05915 NSLJ01000012.1 Protein Homology CDS 2490 4760 . + 0 ID=cds-PDP43897.1;Parent=gene-CLI86_05915;Dbxref=NCBI_GP:PDP43897.1;Name=PDP43897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03572.16;locus_tag=CLI86_05915;product=peptidase S41;protein_id=PDP43897.1;transl_table=11 NSLJ01000012.1 Genbank gene 6194 8377 . + . ID=gene-CLI86_05920;Name=CLI86_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05920 NSLJ01000012.1 Protein Homology CDS 6194 8377 . + 0 ID=cds-PDP43898.1;Parent=gene-CLI86_05920;Dbxref=NCBI_GP:PDP43898.1;Name=PDP43898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04738.11;locus_tag=CLI86_05920;product=hypothetical protein;protein_id=PDP43898.1;transl_table=11 NSLJ01000012.1 Genbank gene 8374 9246 . + . ID=gene-CLI86_05925;Name=CLI86_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05925 NSLJ01000012.1 Protein Homology CDS 8374 9246 . + 0 ID=cds-PDP43899.1;Parent=gene-CLI86_05925;Dbxref=NCBI_GP:PDP43899.1;Name=PDP43899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03891;locus_tag=CLI86_05925;product=hypothetical protein;protein_id=PDP43899.1;transl_table=11 NSLJ01000012.1 Genbank gene 9243 11453 . + . ID=gene-CLI86_05930;Name=CLI86_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05930 NSLJ01000012.1 Protein Homology CDS 9243 11453 . + 0 ID=cds-PDP43900.1;Parent=gene-CLI86_05930;Dbxref=NCBI_GP:PDP43900.1;Name=PDP43900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101315.1;locus_tag=CLI86_05930;product=ABC transporter ATP-binding protein;protein_id=PDP43900.1;transl_table=11 NSLJ01000012.1 Genbank gene 11464 12777 . + . ID=gene-CLI86_05935;Name=CLI86_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05935 NSLJ01000012.1 Protein Homology CDS 11464 12777 . + 0 ID=cds-PDP43901.1;Parent=gene-CLI86_05935;Dbxref=NCBI_GP:PDP43901.1;Name=PDP43901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224291.1;locus_tag=CLI86_05935;product=HlyD family secretion protein;protein_id=PDP43901.1;transl_table=11 NSLJ01000012.1 Genbank gene 12779 13480 . + . ID=gene-CLI86_05940;Name=CLI86_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05940 NSLJ01000012.1 Protein Homology CDS 12779 13480 . + 0 ID=cds-PDP43902.1;Parent=gene-CLI86_05940;Dbxref=NCBI_GP:PDP43902.1;Name=PDP43902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224292.1;locus_tag=CLI86_05940;product=hypothetical protein;protein_id=PDP43902.1;transl_table=11 NSLJ01000012.1 Genbank gene 13471 14235 . + . ID=gene-CLI86_05945;Name=CLI86_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05945 NSLJ01000012.1 Protein Homology CDS 13471 14235 . + 0 ID=cds-PDP43903.1;Parent=gene-CLI86_05945;Dbxref=NCBI_GP:PDP43903.1;Name=PDP43903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224293.1;locus_tag=CLI86_05945;product=hypothetical protein;protein_id=PDP43903.1;transl_table=11 NSLJ01000012.1 Genbank gene 14235 14795 . + . ID=gene-CLI86_05950;Name=CLI86_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05950 NSLJ01000012.1 Protein Homology CDS 14235 14795 . + 0 ID=cds-PDP43962.1;Parent=gene-CLI86_05950;Dbxref=NCBI_GP:PDP43962.1;Name=PDP43962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223591.1;locus_tag=CLI86_05950;product=hypothetical protein;protein_id=PDP43962.1;transl_table=11 NSLJ01000012.1 Genbank gene 14788 15453 . + . ID=gene-CLI86_05955;Name=CLI86_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05955 NSLJ01000012.1 GeneMarkS+ CDS 14788 15453 . + 0 ID=cds-PDP43904.1;Parent=gene-CLI86_05955;Dbxref=NCBI_GP:PDP43904.1;Name=PDP43904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05955;product=hypothetical protein;protein_id=PDP43904.1;transl_table=11 NSLJ01000012.1 Genbank gene 15490 16170 . + . ID=gene-CLI86_05960;Name=CLI86_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05960 NSLJ01000012.1 Protein Homology CDS 15490 16170 . + 0 ID=cds-PDP43963.1;Parent=gene-CLI86_05960;Dbxref=NCBI_GP:PDP43963.1;Name=PDP43963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223593.1;locus_tag=CLI86_05960;product=glycosyl transferase;protein_id=PDP43963.1;transl_table=11 NSLJ01000012.1 Genbank gene 16275 17672 . - . ID=gene-CLI86_05965;Name=CLI86_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05965 NSLJ01000012.1 Protein Homology CDS 16275 17672 . - 0 ID=cds-PDP43905.1;Parent=gene-CLI86_05965;Dbxref=NCBI_GP:PDP43905.1;Name=PDP43905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812784.1;locus_tag=CLI86_05965;product=asparagine--tRNA ligase;protein_id=PDP43905.1;transl_table=11 NSLJ01000012.1 Genbank gene 17695 18993 . - . ID=gene-CLI86_05970;Name=CLI86_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05970 NSLJ01000012.1 Protein Homology CDS 17695 18993 . - 0 ID=cds-PDP43906.1;Parent=gene-CLI86_05970;Dbxref=NCBI_GP:PDP43906.1;Name=PDP43906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779347.1;locus_tag=CLI86_05970;product=ribosomal large subunit pseudouridine synthase B;protein_id=PDP43906.1;transl_table=11 NSLJ01000012.1 Genbank gene 19079 20422 . - . ID=gene-CLI86_05975;Name=CLI86_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05975 NSLJ01000012.1 Protein Homology CDS 19079 20422 . - 0 ID=cds-PDP43907.1;Parent=gene-CLI86_05975;Dbxref=NCBI_GP:PDP43907.1;Name=PDP43907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005650469.1;locus_tag=CLI86_05975;product=adenylosuccinate lyase;protein_id=PDP43907.1;transl_table=11 NSLJ01000012.1 Genbank gene 20687 21667 . - . ID=gene-CLI86_05980;Name=CLI86_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05980 NSLJ01000012.1 Protein Homology CDS 20687 21667 . - 0 ID=cds-PDP43908.1;Parent=gene-CLI86_05980;Dbxref=NCBI_GP:PDP43908.1;Name=PDP43908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228964.1;locus_tag=CLI86_05980;product=transcriptional regulator;protein_id=PDP43908.1;transl_table=11 NSLJ01000012.1 Genbank gene 21804 23018 . - . ID=gene-CLI86_05985;Name=CLI86_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05985 NSLJ01000012.1 Protein Homology CDS 21804 23018 . - 0 ID=cds-PDP43909.1;Parent=gene-CLI86_05985;Dbxref=NCBI_GP:PDP43909.1;Name=PDP43909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968613.1;locus_tag=CLI86_05985;product=hypothetical protein;protein_id=PDP43909.1;transl_table=11 NSLJ01000012.1 Genbank gene 23039 25414 . - . ID=gene-CLI86_05990;Name=CLI86_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05990 NSLJ01000012.1 Protein Homology CDS 23039 25414 . - 0 ID=cds-PDP43910.1;Parent=gene-CLI86_05990;Dbxref=NCBI_GP:PDP43910.1;Name=PDP43910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968614.1;locus_tag=CLI86_05990;product=TonB-dependent receptor;protein_id=PDP43910.1;transl_table=11 NSLJ01000012.1 Genbank gene 25614 27359 . + . ID=gene-CLI86_05995;Name=CLI86_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05995 NSLJ01000012.1 Protein Homology CDS 25614 27359 . + 0 ID=cds-PDP43911.1;Parent=gene-CLI86_05995;Dbxref=NCBI_GP:PDP43911.1;Name=PDP43911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228967.1;locus_tag=CLI86_05995;product=ABC transporter ATP-binding protein;protein_id=PDP43911.1;transl_table=11 NSLJ01000012.1 Genbank gene 27362 29059 . + . ID=gene-CLI86_06000;Name=CLI86_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06000 NSLJ01000012.1 Protein Homology CDS 27362 29059 . + 0 ID=cds-PDP43912.1;Parent=gene-CLI86_06000;Dbxref=NCBI_GP:PDP43912.1;Name=PDP43912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228968.1;locus_tag=CLI86_06000;product=ABC transporter;protein_id=PDP43912.1;transl_table=11 NSLJ01000012.1 Genbank gene 29260 29332 . - . ID=gene-CLI86_06005;Name=CLI86_06005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06005 NSLJ01000012.1 tRNAscan-SE tRNA 29260 29332 . - . ID=rna-CLI86_06005;Parent=gene-CLI86_06005;anticodon=(pos:complement(29297..29299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06005;product=tRNA-Phe NSLJ01000012.1 tRNAscan-SE exon 29260 29332 . - . ID=exon-CLI86_06005-1;Parent=rna-CLI86_06005;anticodon=(pos:complement(29297..29299));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06005;product=tRNA-Phe NSLJ01000012.1 Genbank gene 29634 30938 . + . ID=gene-CLI86_06010;Name=CLI86_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06010 NSLJ01000012.1 Protein Homology CDS 29634 30938 . + 0 ID=cds-PDP43913.1;Parent=gene-CLI86_06010;Dbxref=NCBI_GP:PDP43913.1;Name=PDP43913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223602.1;locus_tag=CLI86_06010;product=C4-dicarboxylate ABC transporter;protein_id=PDP43913.1;transl_table=11 NSLJ01000012.1 Genbank gene 30994 31392 . - . ID=gene-CLI86_06015;Name=CLI86_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06015 NSLJ01000012.1 Protein Homology CDS 30994 31392 . - 0 ID=cds-PDP43914.1;Parent=gene-CLI86_06015;Dbxref=NCBI_GP:PDP43914.1;Name=PDP43914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007652996.1;locus_tag=CLI86_06015;product=hypothetical protein;protein_id=PDP43914.1;transl_table=11 NSLJ01000012.1 Genbank gene 31405 31995 . - . ID=gene-CLI86_06020;Name=CLI86_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06020 NSLJ01000012.1 Protein Homology CDS 31405 31995 . - 0 ID=cds-PDP43915.1;Parent=gene-CLI86_06020;Dbxref=NCBI_GP:PDP43915.1;Name=PDP43915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223604.1;locus_tag=CLI86_06020;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=PDP43915.1;transl_table=11 NSLJ01000012.1 Genbank gene 32054 33022 . + . ID=gene-CLI86_06025;Name=CLI86_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06025 NSLJ01000012.1 Protein Homology CDS 32054 33022 . + 0 ID=cds-PDP43916.1;Parent=gene-CLI86_06025;Dbxref=NCBI_GP:PDP43916.1;Name=PDP43916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013760872.1;locus_tag=CLI86_06025;product=aminodeoxychorismate synthase component I;protein_id=PDP43916.1;transl_table=11 NSLJ01000012.1 Genbank gene 33050 33682 . + . ID=gene-CLI86_06030;Name=CLI86_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06030 NSLJ01000012.1 Protein Homology CDS 33050 33682 . + 0 ID=cds-PDP43917.1;Parent=gene-CLI86_06030;Dbxref=NCBI_GP:PDP43917.1;Name=PDP43917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01063.17;locus_tag=CLI86_06030;product=hypothetical protein;protein_id=PDP43917.1;transl_table=11 NSLJ01000012.1 Genbank gene 33996 36707 . + . ID=gene-CLI86_06035;Name=CLI86_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06035 NSLJ01000012.1 Protein Homology CDS 33996 36707 . + 0 ID=cds-PDP43918.1;Parent=gene-CLI86_06035;Dbxref=NCBI_GP:PDP43918.1;Name=PDP43918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017352501.1;locus_tag=CLI86_06035;product=MFS transporter;protein_id=PDP43918.1;transl_table=11 NSLJ01000012.1 Genbank gene 36754 37017 . + . ID=gene-CLI86_06040;Name=CLI86_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06040 NSLJ01000012.1 GeneMarkS+ CDS 36754 37017 . + 0 ID=cds-PDP43919.1;Parent=gene-CLI86_06040;Dbxref=NCBI_GP:PDP43919.1;Name=PDP43919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06040;product=hypothetical protein;protein_id=PDP43919.1;transl_table=11 NSLJ01000012.1 Genbank gene 37099 38373 . + . ID=gene-CLI86_06045;Name=CLI86_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06045 NSLJ01000012.1 Protein Homology CDS 37099 38373 . + 0 ID=cds-PDP43920.1;Parent=gene-CLI86_06045;Dbxref=NCBI_GP:PDP43920.1;Name=PDP43920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223610.1;locus_tag=CLI86_06045;product=MFS transporter;protein_id=PDP43920.1;transl_table=11 NSLJ01000012.1 Genbank gene 38475 39428 . + . ID=gene-CLI86_06050;Name=CLI86_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06050 NSLJ01000012.1 Protein Homology CDS 38475 39428 . + 0 ID=cds-PDP43921.1;Parent=gene-CLI86_06050;Dbxref=NCBI_GP:PDP43921.1;Name=PDP43921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02494;locus_tag=CLI86_06050;product=glycyl-radical enzyme activating protein;protein_id=PDP43921.1;transl_table=11 NSLJ01000012.1 Genbank gene 39648 40577 . + . ID=gene-CLI86_06055;Name=CLI86_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06055 NSLJ01000012.1 Protein Homology CDS 39648 40577 . + 0 ID=cds-PDP43922.1;Parent=gene-CLI86_06055;Dbxref=NCBI_GP:PDP43922.1;Name=PDP43922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654625.1;locus_tag=CLI86_06055;product=pseudouridine synthase;protein_id=PDP43922.1;transl_table=11 NSLJ01000012.1 Genbank gene 40636 41019 . + . ID=gene-CLI86_06060;Name=CLI86_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06060 NSLJ01000012.1 Protein Homology CDS 40636 41019 . + 0 ID=cds-PDP43923.1;Parent=gene-CLI86_06060;Dbxref=NCBI_GP:PDP43923.1;Name=PDP43923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654999.1;locus_tag=CLI86_06060;product=co-chaperone GroES;protein_id=PDP43923.1;transl_table=11 NSLJ01000012.1 Genbank gene 41035 41847 . + . ID=gene-CLI86_06065;Name=CLI86_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06065 NSLJ01000012.1 Protein Homology CDS 41035 41847 . + 0 ID=cds-PDP43924.1;Parent=gene-CLI86_06065;Dbxref=NCBI_GP:PDP43924.1;Name=PDP43924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013446312.1;locus_tag=CLI86_06065;product=ferredoxin-NADP reductase;protein_id=PDP43924.1;transl_table=11 NSLJ01000012.1 Genbank gene 41844 43343 . + . ID=gene-CLI86_06070;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=CLI86_06070 NSLJ01000012.1 Protein Homology CDS 41844 43343 . + 0 ID=cds-PDP43925.1;Parent=gene-CLI86_06070;Dbxref=NCBI_GP:PDP43925.1;Name=PDP43925.1;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008860946.1;locus_tag=CLI86_06070;product=glutamate synthase (NADPH)%2C homotetrameric;protein_id=PDP43925.1;transl_table=11 NSLJ01000012.1 Genbank gene 43450 43884 . + . ID=gene-CLI86_06075;Name=CLI86_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06075 NSLJ01000012.1 Protein Homology CDS 43450 43884 . + 0 ID=cds-PDP43926.1;Parent=gene-CLI86_06075;Dbxref=NCBI_GP:PDP43926.1;Name=PDP43926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04170.10;locus_tag=CLI86_06075;product=copper resistance protein NlpE;protein_id=PDP43926.1;transl_table=11 NSLJ01000012.1 Genbank gene 44137 44763 . + . ID=gene-CLI86_06080;Name=CLI86_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06080 NSLJ01000012.1 Protein Homology CDS 44137 44763 . + 0 ID=cds-PDP43927.1;Parent=gene-CLI86_06080;Dbxref=NCBI_GP:PDP43927.1;Name=PDP43927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223616.1;locus_tag=CLI86_06080;product=ADP-ribose pyrophosphatase;protein_id=PDP43927.1;transl_table=11 NSLJ01000012.1 Genbank gene 44760 45176 . - . ID=gene-CLI86_06085;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CLI86_06085 NSLJ01000012.1 Protein Homology CDS 44760 45176 . - 0 ID=cds-PDP43928.1;Parent=gene-CLI86_06085;Dbxref=NCBI_GP:PDP43928.1;Name=PDP43928.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223617.1;locus_tag=CLI86_06085;product=large conductance mechanosensitive channel protein MscL;protein_id=PDP43928.1;transl_table=11 NSLJ01000012.1 Genbank gene 45237 46595 . - . ID=gene-CLI86_06090;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CLI86_06090 NSLJ01000012.1 Protein Homology CDS 45237 46595 . - 0 ID=cds-PDP43929.1;Parent=gene-CLI86_06090;Dbxref=NCBI_GP:PDP43929.1;Name=PDP43929.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223618.1;locus_tag=CLI86_06090;product=Na+/H+ antiporter NhaA;protein_id=PDP43929.1;transl_table=11 NSLJ01000012.1 Genbank gene 46774 47523 . - . ID=gene-CLI86_06095;Name=CLI86_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06095 NSLJ01000012.1 Protein Homology CDS 46774 47523 . - 0 ID=cds-PDP43930.1;Parent=gene-CLI86_06095;Dbxref=NCBI_GP:PDP43930.1;Name=PDP43930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933957.1;locus_tag=CLI86_06095;product=DNA-binding response regulator;protein_id=PDP43930.1;transl_table=11 NSLJ01000012.1 Genbank gene 47511 48530 . - . ID=gene-CLI86_06100;Name=CLI86_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06100 NSLJ01000012.1 Protein Homology CDS 47511 48530 . - 0 ID=cds-PDP43931.1;Parent=gene-CLI86_06100;Dbxref=NCBI_GP:PDP43931.1;Name=PDP43931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06580.11;locus_tag=CLI86_06100;product=histidine kinase;protein_id=PDP43931.1;transl_table=11 NSLJ01000012.1 Genbank gene 48705 49676 . + . ID=gene-CLI86_06105;Name=CLI86_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06105 NSLJ01000012.1 Protein Homology CDS 48705 49676 . + 0 ID=cds-PDP43932.1;Parent=gene-CLI86_06105;Dbxref=NCBI_GP:PDP43932.1;Name=PDP43932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009131951.1;locus_tag=CLI86_06105;product=hypothetical protein;protein_id=PDP43932.1;transl_table=11 NSLJ01000012.1 Genbank gene 49983 52343 . - . ID=gene-CLI86_06110;Name=CLI86_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06110 NSLJ01000012.1 Protein Homology CDS 49983 52343 . - 0 ID=cds-PDP43933.1;Parent=gene-CLI86_06110;Dbxref=NCBI_GP:PDP43933.1;Name=PDP43933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858031.1;locus_tag=CLI86_06110;product=multidrug ABC transporter substrate-binding protein;protein_id=PDP43933.1;transl_table=11 NSLJ01000012.1 Genbank gene 52719 52913 . - . ID=gene-CLI86_06115;Name=CLI86_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06115 NSLJ01000012.1 GeneMarkS+ CDS 52719 52913 . - 0 ID=cds-PDP43934.1;Parent=gene-CLI86_06115;Dbxref=NCBI_GP:PDP43934.1;Name=PDP43934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06115;product=hypothetical protein;protein_id=PDP43934.1;transl_table=11 NSLJ01000012.1 Genbank gene 53003 53677 . - . ID=gene-CLI86_06120;Name=CLI86_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06120 NSLJ01000012.1 Protein Homology CDS 53003 53677 . - 0 ID=cds-PDP43935.1;Parent=gene-CLI86_06120;Dbxref=NCBI_GP:PDP43935.1;Name=PDP43935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223625.1;locus_tag=CLI86_06120;product=ABC transporter ATP-binding protein;protein_id=PDP43935.1;transl_table=11 NSLJ01000012.1 Genbank gene 53948 56287 . - . ID=gene-CLI86_06125;Name=CLI86_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06125 NSLJ01000012.1 Protein Homology CDS 53948 56287 . - 0 ID=cds-PDP43936.1;Parent=gene-CLI86_06125;Dbxref=NCBI_GP:PDP43936.1;Name=PDP43936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007653325.1;locus_tag=CLI86_06125;product=multidrug ABC transporter substrate-binding protein;protein_id=PDP43936.1;transl_table=11 NSLJ01000012.1 Genbank pseudogene 56574 58951 . - . ID=gene-CLI86_06130;Name=CLI86_06130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_06130;pseudo=true NSLJ01000012.1 Protein Homology CDS 56574 58951 . - 0 ID=cds-CLI86_06130;Parent=gene-CLI86_06130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866084.1;locus_tag=CLI86_06130;product=multidrug ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NSLJ01000012.1 Genbank gene 59130 60383 . - . ID=gene-CLI86_06135;Name=CLI86_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06135 NSLJ01000012.1 Protein Homology CDS 59130 60383 . - 0 ID=cds-PDP43937.1;Parent=gene-CLI86_06135;Dbxref=NCBI_GP:PDP43937.1;Name=PDP43937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223627.1;locus_tag=CLI86_06135;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP43937.1;transl_table=11 NSLJ01000012.1 Genbank gene 60545 61888 . - . ID=gene-CLI86_06140;Name=CLI86_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06140 NSLJ01000012.1 Protein Homology CDS 60545 61888 . - 0 ID=cds-PDP43964.1;Parent=gene-CLI86_06140;Dbxref=NCBI_GP:PDP43964.1;Name=PDP43964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008158280.1;locus_tag=CLI86_06140;product=transporter;protein_id=PDP43964.1;transl_table=11 NSLJ01000012.1 Genbank gene 62167 65688 . + . ID=gene-CLI86_06145;Name=CLI86_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06145 NSLJ01000012.1 Protein Homology CDS 62167 65688 . + 0 ID=cds-PDP43938.1;Parent=gene-CLI86_06145;Dbxref=NCBI_GP:PDP43938.1;Name=PDP43938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04326.12;locus_tag=CLI86_06145;product=hypothetical protein;protein_id=PDP43938.1;transl_table=11 NSLJ01000012.1 Genbank gene 65685 67043 . + . ID=gene-CLI86_06150;Name=CLI86_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06150 NSLJ01000012.1 Protein Homology CDS 65685 67043 . + 0 ID=cds-PDP43939.1;Parent=gene-CLI86_06150;Dbxref=NCBI_GP:PDP43939.1;Name=PDP43939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223631.1;locus_tag=CLI86_06150;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP43939.1;transl_table=11 NSLJ01000012.1 Genbank gene 67049 68362 . + . ID=gene-CLI86_06155;Name=CLI86_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06155 NSLJ01000012.1 Protein Homology CDS 67049 68362 . + 0 ID=cds-PDP43940.1;Parent=gene-CLI86_06155;Dbxref=NCBI_GP:PDP43940.1;Name=PDP43940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009276068.1;locus_tag=CLI86_06155;product=ATP-binding protein;protein_id=PDP43940.1;transl_table=11 NSLJ01000012.1 Genbank gene 68413 68907 . + . ID=gene-CLI86_06160;Name=CLI86_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06160 NSLJ01000012.1 Protein Homology CDS 68413 68907 . + 0 ID=cds-PDP43941.1;Parent=gene-CLI86_06160;Dbxref=NCBI_GP:PDP43941.1;Name=PDP43941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011099631.1;locus_tag=CLI86_06160;product=cysteine methyltransferase;protein_id=PDP43941.1;transl_table=11 NSLJ01000012.1 Genbank gene 70496 70897 . + . ID=gene-CLI86_06165;Name=CLI86_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06165 NSLJ01000012.1 Protein Homology CDS 70496 70897 . + 0 ID=cds-PDP43942.1;Parent=gene-CLI86_06165;Dbxref=NCBI_GP:PDP43942.1;Name=PDP43942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005826413.1;locus_tag=CLI86_06165;product=DUF2141 domain-containing protein;protein_id=PDP43942.1;transl_table=11 NSLJ01000012.1 Genbank gene 70926 73316 . + . ID=gene-CLI86_06170;Name=CLI86_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06170 NSLJ01000012.1 Protein Homology CDS 70926 73316 . + 0 ID=cds-PDP43943.1;Parent=gene-CLI86_06170;Dbxref=NCBI_GP:PDP43943.1;Name=PDP43943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4%2CHMM:PF14905.4;locus_tag=CLI86_06170;product=TonB-dependent receptor;protein_id=PDP43943.1;transl_table=11 NSLJ01000012.1 Genbank gene 73358 73969 . + . ID=gene-CLI86_06175;Name=CLI86_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06175 NSLJ01000012.1 Protein Homology CDS 73358 73969 . + 0 ID=cds-PDP43944.1;Parent=gene-CLI86_06175;Dbxref=NCBI_GP:PDP43944.1;Name=PDP43944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005840819.1;locus_tag=CLI86_06175;product=hypothetical protein;protein_id=PDP43944.1;transl_table=11 NSLJ01000012.1 Genbank gene 73954 74241 . + . ID=gene-CLI86_06180;Name=CLI86_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06180 NSLJ01000012.1 Protein Homology CDS 73954 74241 . + 0 ID=cds-PDP43945.1;Parent=gene-CLI86_06180;Dbxref=NCBI_GP:PDP43945.1;Name=PDP43945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654580.1;locus_tag=CLI86_06180;product=transcriptional regulator;protein_id=PDP43945.1;transl_table=11 NSLJ01000012.1 Genbank gene 74343 75665 . - . ID=gene-CLI86_06185;Name=CLI86_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06185 NSLJ01000012.1 Protein Homology CDS 74343 75665 . - 0 ID=cds-PDP43965.1;Parent=gene-CLI86_06185;Dbxref=NCBI_GP:PDP43965.1;Name=PDP43965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007757271.1;locus_tag=CLI86_06185;product=alpha-amylase;protein_id=PDP43965.1;transl_table=11 NSLJ01000012.1 Genbank gene 75679 76947 . - . ID=gene-CLI86_06190;Name=CLI86_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06190 NSLJ01000012.1 Protein Homology CDS 75679 76947 . - 0 ID=cds-PDP43946.1;Parent=gene-CLI86_06190;Dbxref=NCBI_GP:PDP43946.1;Name=PDP43946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223641.1;locus_tag=CLI86_06190;product=4-alpha-glucanotransferase;protein_id=PDP43946.1;transl_table=11 NSLJ01000012.1 Genbank gene 76963 78897 . - . ID=gene-CLI86_06195;Name=CLI86_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06195 NSLJ01000012.1 Protein Homology CDS 76963 78897 . - 0 ID=cds-PDP43947.1;Parent=gene-CLI86_06195;Dbxref=NCBI_GP:PDP43947.1;Name=PDP43947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223642.1;locus_tag=CLI86_06195;product=4-alpha-glucanotransferase;protein_id=PDP43947.1;transl_table=11 NSLJ01000012.1 Genbank gene 79318 80991 . - . ID=gene-CLI86_06200;Name=CLI86_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06200 NSLJ01000012.1 Protein Homology CDS 79318 80991 . - 0 ID=cds-PDP43948.1;Parent=gene-CLI86_06200;Dbxref=NCBI_GP:PDP43948.1;Name=PDP43948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637041.1;locus_tag=CLI86_06200;product=acetyl-CoA synthetase;protein_id=PDP43948.1;transl_table=11 NSLJ01000012.1 Genbank gene 81034 81588 . - . ID=gene-CLI86_06205;Name=CLI86_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06205 NSLJ01000012.1 Protein Homology CDS 81034 81588 . - 0 ID=cds-PDP43949.1;Parent=gene-CLI86_06205;Dbxref=NCBI_GP:PDP43949.1;Name=PDP43949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854235.1;locus_tag=CLI86_06205;product=transcriptional regulator;protein_id=PDP43949.1;transl_table=11 NSLJ01000012.1 Genbank gene 81718 82293 . - . ID=gene-CLI86_06210;Name=CLI86_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06210 NSLJ01000012.1 Protein Homology CDS 81718 82293 . - 0 ID=cds-PDP43950.1;Parent=gene-CLI86_06210;Dbxref=NCBI_GP:PDP43950.1;Name=PDP43950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223649.1;locus_tag=CLI86_06210;product=hypothetical protein;protein_id=PDP43950.1;transl_table=11 NSLJ01000012.1 Genbank gene 82390 82974 . - . ID=gene-CLI86_06215;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CLI86_06215 NSLJ01000012.1 Protein Homology CDS 82390 82974 . - 0 ID=cds-PDP43951.1;Parent=gene-CLI86_06215;Dbxref=NCBI_GP:PDP43951.1;Name=PDP43951.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223650.1;locus_tag=CLI86_06215;product=dephospho-CoA kinase;protein_id=PDP43951.1;transl_table=11 NSLJ01000012.1 Genbank gene 82971 83879 . - . ID=gene-CLI86_06220;Name=CLI86_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06220 NSLJ01000012.1 GeneMarkS+ CDS 82971 83879 . - 0 ID=cds-PDP43952.1;Parent=gene-CLI86_06220;Dbxref=NCBI_GP:PDP43952.1;Name=PDP43952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06220;product=hypothetical protein;protein_id=PDP43952.1;transl_table=11 NSLJ01000012.1 Genbank gene 83986 84324 . - . ID=gene-CLI86_06225;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CLI86_06225 NSLJ01000012.1 Protein Homology CDS 83986 84324 . - 0 ID=cds-PDP43953.1;Parent=gene-CLI86_06225;Dbxref=NCBI_GP:PDP43953.1;Name=PDP43953.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223652.1;locus_tag=CLI86_06225;product=preprotein translocase subunit YajC;protein_id=PDP43953.1;transl_table=11 NSLJ01000012.1 Genbank gene 84406 85332 . - . ID=gene-CLI86_06230;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CLI86_06230 NSLJ01000012.1 Protein Homology CDS 84406 85332 . - 0 ID=cds-PDP43954.1;Parent=gene-CLI86_06230;Dbxref=NCBI_GP:PDP43954.1;Name=PDP43954.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640949.1;locus_tag=CLI86_06230;product=transcription antitermination factor NusB;protein_id=PDP43954.1;transl_table=11 NSLJ01000012.1 Genbank gene 85486 86526 . - . ID=gene-CLI86_06235;Name=CLI86_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06235 NSLJ01000012.1 Protein Homology CDS 85486 86526 . - 0 ID=cds-PDP43955.1;Parent=gene-CLI86_06235;Dbxref=NCBI_GP:PDP43955.1;Name=PDP43955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223655.1;locus_tag=CLI86_06235;product=type I asparaginase;protein_id=PDP43955.1;transl_table=11 NSLJ01000012.1 Genbank gene 86688 87635 . + . ID=gene-CLI86_06240;Name=CLI86_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06240 NSLJ01000012.1 Protein Homology CDS 86688 87635 . + 0 ID=cds-PDP43956.1;Parent=gene-CLI86_06240;Dbxref=NCBI_GP:PDP43956.1;Name=PDP43956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02517.14;locus_tag=CLI86_06240;product=CPBP family intramembrane metalloprotease;protein_id=PDP43956.1;transl_table=11 NSLJ01000012.1 Genbank gene 87804 88679 . - . ID=gene-CLI86_06245;Name=CLI86_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06245 NSLJ01000012.1 Protein Homology CDS 87804 88679 . - 0 ID=cds-PDP43957.1;Parent=gene-CLI86_06245;Dbxref=NCBI_GP:PDP43957.1;Name=PDP43957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223657.1;locus_tag=CLI86_06245;product=glycoside hydrolase;protein_id=PDP43957.1;transl_table=11 NSLJ01000012.1 Genbank gene 88763 90307 . - . ID=gene-CLI86_06250;Name=CLI86_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06250 NSLJ01000012.1 Protein Homology CDS 88763 90307 . - 0 ID=cds-PDP43958.1;Parent=gene-CLI86_06250;Dbxref=NCBI_GP:PDP43958.1;Name=PDP43958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12771.5;locus_tag=CLI86_06250;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP43958.1;transl_table=11 NSLJ01000012.1 Genbank gene 90310 93717 . - . ID=gene-CLI86_06255;Name=CLI86_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06255 NSLJ01000012.1 Protein Homology CDS 90310 93717 . - 0 ID=cds-PDP43959.1;Parent=gene-CLI86_06255;Dbxref=NCBI_GP:PDP43959.1;Name=PDP43959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_06255;product=TonB-dependent receptor;protein_id=PDP43959.1;transl_table=11 NSLJ01000012.1 Genbank gene 93844 94821 . - . ID=gene-CLI86_06260;Name=CLI86_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06260 NSLJ01000012.1 Protein Homology CDS 93844 94821 . - 0 ID=cds-PDP43960.1;Parent=gene-CLI86_06260;Dbxref=NCBI_GP:PDP43960.1;Name=PDP43960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019539448.1;locus_tag=CLI86_06260;product=iron dicitrate transport regulator FecR;protein_id=PDP43960.1;transl_table=11 NSLJ01000012.1 Genbank gene 94888 95550 . - . ID=gene-CLI86_06265;Name=CLI86_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06265 NSLJ01000012.1 Protein Homology CDS 94888 95550 . - 0 ID=cds-PDP43961.1;Parent=gene-CLI86_06265;Dbxref=NCBI_GP:PDP43961.1;Name=PDP43961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223661.1;locus_tag=CLI86_06265;product=RNA polymerase sigma-70 factor;protein_id=PDP43961.1;transl_table=11 ##sequence-region NSLJ01000129.1 1 309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000129.1 Genbank region 1 309 . + . ID=NSLJ01000129.1:1..309;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000130.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000130.1 Genbank region 1 307 . + . ID=NSLJ01000130.1:1..307;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000130.1 Genbank gene 1 307 . + . ID=gene-CLI86_14060;Name=CLI86_14060;end_range=307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14060;partial=true;start_range=.,1 NSLJ01000130.1 GeneMarkS+ CDS 1 307 . + 2 ID=cds-PDP40001.1;Parent=gene-CLI86_14060;Dbxref=NCBI_GP:PDP40001.1;Name=PDP40001.1;end_range=307,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_14060;partial=true;product=hypothetical protein;protein_id=PDP40001.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000131.1 1 298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000131.1 Genbank region 1 298 . + . ID=NSLJ01000131.1:1..298;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000131.1 Genbank gene 1 298 . - . ID=gene-CLI86_14065;Name=CLI86_14065;end_range=298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14065;partial=true;start_range=.,1 NSLJ01000131.1 Protein Homology CDS 1 298 . - 0 ID=cds-PDP39998.1;Parent=gene-CLI86_14065;Dbxref=NCBI_GP:PDP39998.1;Name=PDP39998.1;end_range=298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225403.1;locus_tag=CLI86_14065;partial=true;product=GLPGLI family protein;protein_id=PDP39998.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000132.1 1 295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000132.1 Genbank region 1 295 . + . ID=NSLJ01000132.1:1..295;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000133.1 1 293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000133.1 Genbank region 1 293 . + . ID=NSLJ01000133.1:1..293;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000134.1 1 276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000134.1 Genbank region 1 276 . + . ID=NSLJ01000134.1:1..276;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000134.1 Genbank gene 1 276 . - . ID=gene-CLI86_14070;Name=CLI86_14070;end_range=276,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14070;partial=true;start_range=.,1 NSLJ01000134.1 Protein Homology CDS 1 276 . - 0 ID=cds-PDP39849.1;Parent=gene-CLI86_14070;Dbxref=NCBI_GP:PDP39849.1;Name=PDP39849.1;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223832.1;locus_tag=CLI86_14070;partial=true;product=S26 family signal peptidase;protein_id=PDP39849.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000135.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000135.1 Genbank region 1 273 . + . ID=NSLJ01000135.1:1..273;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000135.1 Genbank gene 1 273 . - . ID=gene-CLI86_14075;Name=CLI86_14075;end_range=273,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14075;partial=true;start_range=.,1 NSLJ01000135.1 Protein Homology CDS 1 273 . - 1 ID=cds-PDP39848.1;Parent=gene-CLI86_14075;Dbxref=NCBI_GP:PDP39848.1;Name=PDP39848.1;end_range=273,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_14075;partial=true;product=hypothetical protein;protein_id=PDP39848.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000136.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000136.1 Genbank region 1 254 . + . ID=NSLJ01000136.1:1..254;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000136.1 Genbank gene 1 110 . - . ID=gene-CLI86_14080;Name=CLI86_14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14080;partial=true;start_range=.,1 NSLJ01000136.1 Protein Homology CDS 1 110 . - 0 ID=cds-PDP39847.1;Parent=gene-CLI86_14080;Dbxref=NCBI_GP:PDP39847.1;Name=PDP39847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224670.1;locus_tag=CLI86_14080;partial=true;product=IS1595 family transposase;protein_id=PDP39847.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000137.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000137.1 Genbank region 1 254 . + . ID=NSLJ01000137.1:1..254;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000137.1 Genbank gene 11 254 . + . ID=gene-CLI86_14085;Name=CLI86_14085;end_range=254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14085;partial=true NSLJ01000137.1 Protein Homology CDS 11 254 . + 0 ID=cds-PDP39843.1;Parent=gene-CLI86_14085;Dbxref=NCBI_GP:PDP39843.1;Name=PDP39843.1;end_range=254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224932.1;locus_tag=CLI86_14085;partial=true;product=IS110 family transposase;protein_id=PDP39843.1;transl_table=11 ##sequence-region NSLJ01000138.1 1 247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000138.1 Genbank region 1 247 . + . ID=NSLJ01000138.1:1..247;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000138.1 Genbank pseudogene 119 247 . - . ID=gene-CLI86_14090;Name=CLI86_14090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_14090;pseudo=true NSLJ01000138.1 Protein Homology CDS 119 247 . - 0 ID=cds-CLI86_14090;Parent=gene-CLI86_14090;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_14090;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000013.1 1 86575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000013.1 Genbank region 1 86575 . + . ID=NSLJ01000013.1:1..86575;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000013.1 Genbank gene 376 693 . + . ID=gene-CLI86_06270;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CLI86_06270 NSLJ01000013.1 Protein Homology CDS 376 693 . + 0 ID=cds-PDP43825.1;Parent=gene-CLI86_06270;Dbxref=NCBI_GP:PDP43825.1;Name=PDP43825.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709329.1;locus_tag=CLI86_06270;product=50S ribosomal protein L21;protein_id=PDP43825.1;transl_table=11 NSLJ01000013.1 Genbank gene 714 992 . + . ID=gene-CLI86_06275;Name=CLI86_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06275 NSLJ01000013.1 Protein Homology CDS 714 992 . + 0 ID=cds-PDP43826.1;Parent=gene-CLI86_06275;Dbxref=NCBI_GP:PDP43826.1;Name=PDP43826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225219.1;locus_tag=CLI86_06275;product=50S ribosomal protein L27;protein_id=PDP43826.1;transl_table=11 NSLJ01000013.1 Genbank gene 1143 1685 . + . ID=gene-CLI86_06280;Name=CLI86_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06280 NSLJ01000013.1 Protein Homology CDS 1143 1685 . + 0 ID=cds-PDP43827.1;Parent=gene-CLI86_06280;Dbxref=NCBI_GP:PDP43827.1;Name=PDP43827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225220.1;locus_tag=CLI86_06280;product=hypothetical protein;protein_id=PDP43827.1;transl_table=11 NSLJ01000013.1 Genbank gene 1759 3030 . + . ID=gene-CLI86_06285;Name=CLI86_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06285 NSLJ01000013.1 Protein Homology CDS 1759 3030 . + 0 ID=cds-PDP43828.1;Parent=gene-CLI86_06285;Dbxref=NCBI_GP:PDP43828.1;Name=PDP43828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842314.1;locus_tag=CLI86_06285;product=serine--tRNA ligase;protein_id=PDP43828.1;transl_table=11 NSLJ01000013.1 Genbank gene 3144 4271 . - . ID=gene-CLI86_06290;Name=CLI86_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06290 NSLJ01000013.1 Protein Homology CDS 3144 4271 . - 0 ID=cds-PDP43829.1;Parent=gene-CLI86_06290;Dbxref=NCBI_GP:PDP43829.1;Name=PDP43829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225222.1;locus_tag=CLI86_06290;product=metallophosphatase;protein_id=PDP43829.1;transl_table=11 NSLJ01000013.1 Genbank gene 4378 4596 . - . ID=gene-CLI86_06295;Name=CLI86_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06295 NSLJ01000013.1 GeneMarkS+ CDS 4378 4596 . - 0 ID=cds-PDP43830.1;Parent=gene-CLI86_06295;Dbxref=NCBI_GP:PDP43830.1;Name=PDP43830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06295;product=hypothetical protein;protein_id=PDP43830.1;transl_table=11 NSLJ01000013.1 Genbank gene 4678 5886 . - . ID=gene-CLI86_06300;Name=CLI86_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06300 NSLJ01000013.1 Protein Homology CDS 4678 5886 . - 0 ID=cds-PDP43831.1;Parent=gene-CLI86_06300;Dbxref=NCBI_GP:PDP43831.1;Name=PDP43831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225224.1;locus_tag=CLI86_06300;product=Fic family protein;protein_id=PDP43831.1;transl_table=11 NSLJ01000013.1 Genbank gene 6312 6491 . - . ID=gene-CLI86_06305;Name=CLI86_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06305 NSLJ01000013.1 GeneMarkS+ CDS 6312 6491 . - 0 ID=cds-PDP43832.1;Parent=gene-CLI86_06305;Dbxref=NCBI_GP:PDP43832.1;Name=PDP43832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06305;product=hypothetical protein;protein_id=PDP43832.1;transl_table=11 NSLJ01000013.1 Genbank gene 6778 7989 . + . ID=gene-CLI86_06310;Name=CLI86_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06310 NSLJ01000013.1 Protein Homology CDS 6778 7989 . + 0 ID=cds-PDP43833.1;Parent=gene-CLI86_06310;Dbxref=NCBI_GP:PDP43833.1;Name=PDP43833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225225.1;locus_tag=CLI86_06310;product=AAA family ATPase;protein_id=PDP43833.1;transl_table=11 NSLJ01000013.1 Genbank gene 8369 9403 . + . ID=gene-CLI86_06315;Name=CLI86_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06315 NSLJ01000013.1 Protein Homology CDS 8369 9403 . + 0 ID=cds-PDP43834.1;Parent=gene-CLI86_06315;Dbxref=NCBI_GP:PDP43834.1;Name=PDP43834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225227.1;locus_tag=CLI86_06315;product=iron ABC transporter permease;protein_id=PDP43834.1;transl_table=11 NSLJ01000013.1 Genbank gene 9442 10650 . - . ID=gene-CLI86_06320;Name=CLI86_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06320 NSLJ01000013.1 GeneMarkS+ CDS 9442 10650 . - 0 ID=cds-PDP43835.1;Parent=gene-CLI86_06320;Dbxref=NCBI_GP:PDP43835.1;Name=PDP43835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06320;product=hypothetical protein;protein_id=PDP43835.1;transl_table=11 NSLJ01000013.1 Genbank gene 10634 12613 . - . ID=gene-CLI86_06325;Name=CLI86_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06325 NSLJ01000013.1 Protein Homology CDS 10634 12613 . - 0 ID=cds-PDP43882.1;Parent=gene-CLI86_06325;Dbxref=NCBI_GP:PDP43882.1;Name=PDP43882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225228.1;locus_tag=CLI86_06325;product=DUF349 domain-containing protein;protein_id=PDP43882.1;transl_table=11 NSLJ01000013.1 Genbank gene 12747 20195 . - . ID=gene-CLI86_06330;Name=sprA;gbkey=Gene;gene=sprA;gene_biotype=protein_coding;locus_tag=CLI86_06330 NSLJ01000013.1 Protein Homology CDS 12747 20195 . - 0 ID=cds-PDP43836.1;Parent=gene-CLI86_06330;Dbxref=NCBI_GP:PDP43836.1;Name=PDP43836.1;gbkey=CDS;gene=sprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225229.1;locus_tag=CLI86_06330;product=cell surface protein SprA;protein_id=PDP43836.1;transl_table=11 NSLJ01000013.1 Genbank gene 20195 20785 . - . ID=gene-CLI86_06335;Name=CLI86_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06335 NSLJ01000013.1 Protein Homology CDS 20195 20785 . - 0 ID=cds-PDP43837.1;Parent=gene-CLI86_06335;Dbxref=NCBI_GP:PDP43837.1;Name=PDP43837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773941.1;locus_tag=CLI86_06335;product=Holliday junction branch migration protein RuvA;protein_id=PDP43837.1;transl_table=11 NSLJ01000013.1 Genbank gene 20958 21293 . + . ID=gene-CLI86_06340;Name=CLI86_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06340 NSLJ01000013.1 Protein Homology CDS 20958 21293 . + 0 ID=cds-PDP43838.1;Parent=gene-CLI86_06340;Dbxref=NCBI_GP:PDP43838.1;Name=PDP43838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225232.1;locus_tag=CLI86_06340;product=translation initiation factor;protein_id=PDP43838.1;transl_table=11 NSLJ01000013.1 Genbank gene 21287 24511 . + . ID=gene-CLI86_06345;Name=CLI86_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06345 NSLJ01000013.1 Protein Homology CDS 21287 24511 . + 0 ID=cds-PDP43839.1;Parent=gene-CLI86_06345;Dbxref=NCBI_GP:PDP43839.1;Name=PDP43839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225233.1;locus_tag=CLI86_06345;product=ATP-dependent helicase;protein_id=PDP43839.1;transl_table=11 NSLJ01000013.1 Genbank gene 24566 25240 . + . ID=gene-CLI86_06350;Name=CLI86_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06350 NSLJ01000013.1 Protein Homology CDS 24566 25240 . + 0 ID=cds-PDP43840.1;Parent=gene-CLI86_06350;Dbxref=NCBI_GP:PDP43840.1;Name=PDP43840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225234.1;locus_tag=CLI86_06350;product=phosphatidylserine decarboxylase family protein;protein_id=PDP43840.1;transl_table=11 NSLJ01000013.1 Genbank gene 25245 25988 . + . ID=gene-CLI86_06355;Name=CLI86_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06355 NSLJ01000013.1 Protein Homology CDS 25245 25988 . + 0 ID=cds-PDP43841.1;Parent=gene-CLI86_06355;Dbxref=NCBI_GP:PDP43841.1;Name=PDP43841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225235.1;locus_tag=CLI86_06355;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=PDP43841.1;transl_table=11 NSLJ01000013.1 Genbank gene 26105 26986 . + . ID=gene-CLI86_06360;Name=CLI86_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06360 NSLJ01000013.1 Protein Homology CDS 26105 26986 . + 0 ID=cds-PDP43842.1;Parent=gene-CLI86_06360;Dbxref=NCBI_GP:PDP43842.1;Name=PDP43842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CLI86_06360;product=AraC family transcriptional regulator;protein_id=PDP43842.1;transl_table=11 NSLJ01000013.1 Genbank gene 27029 28264 . + . ID=gene-CLI86_06365;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CLI86_06365 NSLJ01000013.1 Protein Homology CDS 27029 28264 . + 0 ID=cds-PDP43843.1;Parent=gene-CLI86_06365;Dbxref=NCBI_GP:PDP43843.1;Name=PDP43843.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225237.1;locus_tag=CLI86_06365;product=GTPase HflX;protein_id=PDP43843.1;transl_table=11 NSLJ01000013.1 Genbank gene 28253 29365 . - . ID=gene-CLI86_06370;Name=CLI86_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06370 NSLJ01000013.1 Protein Homology CDS 28253 29365 . - 0 ID=cds-PDP43844.1;Parent=gene-CLI86_06370;Dbxref=NCBI_GP:PDP43844.1;Name=PDP43844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04536.12;locus_tag=CLI86_06370;product=hypothetical protein;protein_id=PDP43844.1;transl_table=11 NSLJ01000013.1 Genbank gene 29371 29964 . - . ID=gene-CLI86_06375;Name=CLI86_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06375 NSLJ01000013.1 Protein Homology CDS 29371 29964 . - 0 ID=cds-PDP43883.1;Parent=gene-CLI86_06375;Dbxref=NCBI_GP:PDP43883.1;Name=PDP43883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007561404.1;locus_tag=CLI86_06375;product=LemA family protein;protein_id=PDP43883.1;transl_table=11 NSLJ01000013.1 Genbank gene 30011 31507 . - . ID=gene-CLI86_06380;Name=CLI86_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06380 NSLJ01000013.1 GeneMarkS+ CDS 30011 31507 . - 0 ID=cds-PDP43845.1;Parent=gene-CLI86_06380;Dbxref=NCBI_GP:PDP43845.1;Name=PDP43845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06380;product=hypothetical protein;protein_id=PDP43845.1;transl_table=11 NSLJ01000013.1 Genbank gene 31494 32624 . - . ID=gene-CLI86_06385;Name=CLI86_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06385 NSLJ01000013.1 Protein Homology CDS 31494 32624 . - 0 ID=cds-PDP43846.1;Parent=gene-CLI86_06385;Dbxref=NCBI_GP:PDP43846.1;Name=PDP43846.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13308.4;locus_tag=CLI86_06385;product=hypothetical protein;protein_id=PDP43846.1;transl_table=11 NSLJ01000013.1 Genbank gene 33966 35027 . - . ID=gene-CLI86_06390;Name=CLI86_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06390 NSLJ01000013.1 Protein Homology CDS 33966 35027 . - 0 ID=cds-PDP43884.1;Parent=gene-CLI86_06390;Dbxref=NCBI_GP:PDP43884.1;Name=PDP43884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299036.1;locus_tag=CLI86_06390;product=hypothetical protein;protein_id=PDP43884.1;transl_table=11 NSLJ01000013.1 Genbank gene 35103 35645 . - . ID=gene-CLI86_06395;Name=CLI86_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06395 NSLJ01000013.1 Protein Homology CDS 35103 35645 . - 0 ID=cds-PDP43847.1;Parent=gene-CLI86_06395;Dbxref=NCBI_GP:PDP43847.1;Name=PDP43847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015944028.1;locus_tag=CLI86_06395;product=LemA family protein;protein_id=PDP43847.1;transl_table=11 NSLJ01000013.1 Genbank gene 35799 37625 . - . ID=gene-CLI86_06400;Name=CLI86_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06400 NSLJ01000013.1 Protein Homology CDS 35799 37625 . - 0 ID=cds-PDP43848.1;Parent=gene-CLI86_06400;Dbxref=NCBI_GP:PDP43848.1;Name=PDP43848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09972.7;locus_tag=CLI86_06400;product=hypothetical protein;protein_id=PDP43848.1;transl_table=11 NSLJ01000013.1 Genbank gene 37625 37846 . - . ID=gene-CLI86_06405;Name=CLI86_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06405 NSLJ01000013.1 GeneMarkS+ CDS 37625 37846 . - 0 ID=cds-PDP43849.1;Parent=gene-CLI86_06405;Dbxref=NCBI_GP:PDP43849.1;Name=PDP43849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06405;product=hypothetical protein;protein_id=PDP43849.1;transl_table=11 NSLJ01000013.1 Genbank gene 37982 39421 . - . ID=gene-CLI86_06410;Name=CLI86_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06410 NSLJ01000013.1 Protein Homology CDS 37982 39421 . - 0 ID=cds-PDP43850.1;Parent=gene-CLI86_06410;Dbxref=NCBI_GP:PDP43850.1;Name=PDP43850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00149.26%2CHMM:PF02872.16;locus_tag=CLI86_06410;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PDP43850.1;transl_table=11 NSLJ01000013.1 Genbank gene 39444 40634 . - . ID=gene-CLI86_06415;Name=CLI86_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06415 NSLJ01000013.1 Protein Homology CDS 39444 40634 . - 0 ID=cds-PDP43851.1;Parent=gene-CLI86_06415;Dbxref=NCBI_GP:PDP43851.1;Name=PDP43851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07787.10;locus_tag=CLI86_06415;product=hypothetical protein;protein_id=PDP43851.1;transl_table=11 NSLJ01000013.1 Genbank gene 40926 41105 . + . ID=gene-CLI86_06420;Name=CLI86_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06420 NSLJ01000013.1 Protein Homology CDS 40926 41105 . + 0 ID=cds-PDP43852.1;Parent=gene-CLI86_06420;Dbxref=NCBI_GP:PDP43852.1;Name=PDP43852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224792.1;locus_tag=CLI86_06420;product=hypothetical protein;protein_id=PDP43852.1;transl_table=11 NSLJ01000013.1 Genbank gene 41417 43705 . - . ID=gene-CLI86_06425;Name=CLI86_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06425 NSLJ01000013.1 Protein Homology CDS 41417 43705 . - 0 ID=cds-PDP43853.1;Parent=gene-CLI86_06425;Dbxref=NCBI_GP:PDP43853.1;Name=PDP43853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13004.5;locus_tag=CLI86_06425;product=hypothetical protein;protein_id=PDP43853.1;transl_table=11 NSLJ01000013.1 Genbank gene 44891 47845 . + . ID=gene-CLI86_06430;Name=CLI86_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06430 NSLJ01000013.1 Protein Homology CDS 44891 47845 . + 0 ID=cds-PDP43854.1;Parent=gene-CLI86_06430;Dbxref=NCBI_GP:PDP43854.1;Name=PDP43854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00512.23%2CHMM:PF02518.24%2CHMM:PF12833.5%2CHMM:PF13424.4;locus_tag=CLI86_06430;product=AraC family transcriptional regulator;protein_id=PDP43854.1;transl_table=11 NSLJ01000013.1 Genbank gene 48001 50334 . - . ID=gene-CLI86_06435;Name=CLI86_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06435 NSLJ01000013.1 Protein Homology CDS 48001 50334 . - 0 ID=cds-PDP43855.1;Parent=gene-CLI86_06435;Dbxref=NCBI_GP:PDP43855.1;Name=PDP43855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225256.1;locus_tag=CLI86_06435;product=beta-hexosaminidase;protein_id=PDP43855.1;transl_table=11 NSLJ01000013.1 Genbank gene 50371 51651 . - . ID=gene-CLI86_06440;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CLI86_06440 NSLJ01000013.1 Protein Homology CDS 50371 51651 . - 0 ID=cds-PDP43856.1;Parent=gene-CLI86_06440;Dbxref=NCBI_GP:PDP43856.1;Name=PDP43856.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007835317.1;locus_tag=CLI86_06440;product=serine hydroxymethyltransferase;protein_id=PDP43856.1;transl_table=11 NSLJ01000013.1 Genbank gene 52064 52135 . - . ID=gene-CLI86_06445;Name=CLI86_06445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06445 NSLJ01000013.1 tRNAscan-SE tRNA 52064 52135 . - . ID=rna-CLI86_06445;Parent=gene-CLI86_06445;anticodon=(pos:complement(52100..52102));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06445;product=tRNA-Arg NSLJ01000013.1 tRNAscan-SE exon 52064 52135 . - . ID=exon-CLI86_06445-1;Parent=rna-CLI86_06445;anticodon=(pos:complement(52100..52102));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06445;product=tRNA-Arg NSLJ01000013.1 Genbank gene 52203 52787 . - . ID=gene-CLI86_06450;Name=CLI86_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06450 NSLJ01000013.1 Protein Homology CDS 52203 52787 . - 0 ID=cds-PDP43885.1;Parent=gene-CLI86_06450;Dbxref=NCBI_GP:PDP43885.1;Name=PDP43885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225258.1;locus_tag=CLI86_06450;product=superoxide dismutase;protein_id=PDP43885.1;transl_table=11 NSLJ01000013.1 Genbank gene 52935 53663 . - . ID=gene-CLI86_06455;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CLI86_06455 NSLJ01000013.1 Protein Homology CDS 52935 53663 . - 0 ID=cds-PDP43857.1;Parent=gene-CLI86_06455;Dbxref=NCBI_GP:PDP43857.1;Name=PDP43857.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225259.1;locus_tag=CLI86_06455;product=DNA repair protein RecO;protein_id=PDP43857.1;transl_table=11 NSLJ01000013.1 Genbank gene 53785 54711 . - . ID=gene-CLI86_06460;Name=CLI86_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06460 NSLJ01000013.1 GeneMarkS+ CDS 53785 54711 . - 0 ID=cds-PDP43858.1;Parent=gene-CLI86_06460;Dbxref=NCBI_GP:PDP43858.1;Name=PDP43858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06460;product=hypothetical protein;protein_id=PDP43858.1;transl_table=11 NSLJ01000013.1 Genbank gene 55063 56583 . + . ID=gene-CLI86_06465;Name=CLI86_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06465 NSLJ01000013.1 Protein Homology CDS 55063 56583 . + 0 ID=cds-PDP43859.1;Parent=gene-CLI86_06465;Dbxref=NCBI_GP:PDP43859.1;Name=PDP43859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101483.1;locus_tag=CLI86_06465;product=glutamate--tRNA ligase;protein_id=PDP43859.1;transl_table=11 NSLJ01000013.1 Genbank gene 56583 57815 . + . ID=gene-CLI86_06470;Name=CLI86_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06470 NSLJ01000013.1 Protein Homology CDS 56583 57815 . + 0 ID=cds-PDP43860.1;Parent=gene-CLI86_06470;Dbxref=NCBI_GP:PDP43860.1;Name=PDP43860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225263.1;locus_tag=CLI86_06470;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=PDP43860.1;transl_table=11 NSLJ01000013.1 Genbank gene 57819 58952 . - . ID=gene-CLI86_06475;Name=CLI86_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06475 NSLJ01000013.1 Protein Homology CDS 57819 58952 . - 0 ID=cds-PDP43886.1;Parent=gene-CLI86_06475;Dbxref=NCBI_GP:PDP43886.1;Name=PDP43886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225264.1;locus_tag=CLI86_06475;product=capsular biosynthesis protein;protein_id=PDP43886.1;transl_table=11 NSLJ01000013.1 Genbank gene 58952 59473 . - . ID=gene-CLI86_06480;Name=CLI86_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06480 NSLJ01000013.1 Protein Homology CDS 58952 59473 . - 0 ID=cds-PDP43887.1;Parent=gene-CLI86_06480;Dbxref=NCBI_GP:PDP43887.1;Name=PDP43887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006799727.1;locus_tag=CLI86_06480;product=gamma carbonic anhydrase family protein;protein_id=PDP43887.1;transl_table=11 NSLJ01000013.1 Genbank gene 59652 59843 . + . ID=gene-CLI86_06485;Name=CLI86_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06485 NSLJ01000013.1 Protein Homology CDS 59652 59843 . + 0 ID=cds-PDP43861.1;Parent=gene-CLI86_06485;Dbxref=NCBI_GP:PDP43861.1;Name=PDP43861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654191.1;locus_tag=CLI86_06485;product=30S ribosomal protein S21;protein_id=PDP43861.1;transl_table=11 NSLJ01000013.1 Genbank gene 59919 60818 . + . ID=gene-CLI86_06490;Name=CLI86_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06490 NSLJ01000013.1 Protein Homology CDS 59919 60818 . + 0 ID=cds-PDP43862.1;Parent=gene-CLI86_06490;Dbxref=NCBI_GP:PDP43862.1;Name=PDP43862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225267.1;locus_tag=CLI86_06490;product=recombinase;protein_id=PDP43862.1;transl_table=11 NSLJ01000013.1 Genbank gene 60830 61129 . + . ID=gene-CLI86_06495;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CLI86_06495 NSLJ01000013.1 Protein Homology CDS 60830 61129 . + 0 ID=cds-PDP43863.1;Parent=gene-CLI86_06495;Dbxref=NCBI_GP:PDP43863.1;Name=PDP43863.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654185.1;locus_tag=CLI86_06495;product=ribosomal subunit interface protein;protein_id=PDP43863.1;transl_table=11 NSLJ01000013.1 Genbank gene 61222 61298 . + . ID=gene-CLI86_06500;Name=CLI86_06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06500 NSLJ01000013.1 tRNAscan-SE tRNA 61222 61298 . + . ID=rna-CLI86_06500;Parent=gene-CLI86_06500;anticodon=(pos:61256..61258);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06500;product=tRNA-Thr NSLJ01000013.1 tRNAscan-SE exon 61222 61298 . + . ID=exon-CLI86_06500-1;Parent=rna-CLI86_06500;anticodon=(pos:61256..61258);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06500;product=tRNA-Thr NSLJ01000013.1 Genbank gene 61415 61486 . + . ID=gene-CLI86_06505;Name=CLI86_06505;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06505 NSLJ01000013.1 tRNAscan-SE tRNA 61415 61486 . + . ID=rna-CLI86_06505;Parent=gene-CLI86_06505;anticodon=(pos:61447..61449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06505;product=tRNA-Thr NSLJ01000013.1 tRNAscan-SE exon 61415 61486 . + . ID=exon-CLI86_06505-1;Parent=rna-CLI86_06505;anticodon=(pos:61447..61449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06505;product=tRNA-Thr NSLJ01000013.1 Genbank gene 61546 62733 . + . ID=gene-CLI86_06510;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CLI86_06510 NSLJ01000013.1 Protein Homology CDS 61546 62733 . + 0 ID=cds-PDP43864.1;Parent=gene-CLI86_06510;Dbxref=NCBI_GP:PDP43864.1;Name=PDP43864.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558087.1;locus_tag=CLI86_06510;product=elongation factor Tu;protein_id=PDP43864.1;transl_table=11 NSLJ01000013.1 Genbank gene 62782 62857 . + . ID=gene-CLI86_06515;Name=CLI86_06515;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06515 NSLJ01000013.1 tRNAscan-SE tRNA 62782 62857 . + . ID=rna-CLI86_06515;Parent=gene-CLI86_06515;anticodon=(pos:62815..62817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06515;product=tRNA-Trp NSLJ01000013.1 tRNAscan-SE exon 62782 62857 . + . ID=exon-CLI86_06515-1;Parent=rna-CLI86_06515;anticodon=(pos:62815..62817);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06515;product=tRNA-Trp NSLJ01000013.1 Genbank gene 62871 63059 . + . ID=gene-CLI86_06520;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CLI86_06520 NSLJ01000013.1 Protein Homology CDS 62871 63059 . + 0 ID=cds-PDP43865.1;Parent=gene-CLI86_06520;Dbxref=NCBI_GP:PDP43865.1;Name=PDP43865.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225270.1;locus_tag=CLI86_06520;product=preprotein translocase subunit SecE;protein_id=PDP43865.1;transl_table=11 NSLJ01000013.1 Genbank gene 63071 63613 . + . ID=gene-CLI86_06525;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CLI86_06525 NSLJ01000013.1 Protein Homology CDS 63071 63613 . + 0 ID=cds-PDP43866.1;Parent=gene-CLI86_06525;Dbxref=NCBI_GP:PDP43866.1;Name=PDP43866.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811651.1;locus_tag=CLI86_06525;product=transcription termination/antitermination factor NusG;protein_id=PDP43866.1;transl_table=11 NSLJ01000013.1 Genbank gene 63675 64121 . + . ID=gene-CLI86_06530;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CLI86_06530 NSLJ01000013.1 Protein Homology CDS 63675 64121 . + 0 ID=cds-PDP43867.1;Parent=gene-CLI86_06530;Dbxref=NCBI_GP:PDP43867.1;Name=PDP43867.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225272.1;locus_tag=CLI86_06530;product=50S ribosomal protein L11;protein_id=PDP43867.1;transl_table=11 NSLJ01000013.1 Genbank gene 64136 64831 . + . ID=gene-CLI86_06535;Name=CLI86_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06535 NSLJ01000013.1 Protein Homology CDS 64136 64831 . + 0 ID=cds-PDP43868.1;Parent=gene-CLI86_06535;Dbxref=NCBI_GP:PDP43868.1;Name=PDP43868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811649.1;locus_tag=CLI86_06535;product=50S ribosomal protein L1;protein_id=PDP43868.1;transl_table=11 NSLJ01000013.1 Genbank gene 64854 65381 . + . ID=gene-CLI86_06540;Name=CLI86_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06540 NSLJ01000013.1 Protein Homology CDS 64854 65381 . + 0 ID=cds-PDP43869.1;Parent=gene-CLI86_06540;Dbxref=NCBI_GP:PDP43869.1;Name=PDP43869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654179.1;locus_tag=CLI86_06540;product=50S ribosomal protein L10;protein_id=PDP43869.1;transl_table=11 NSLJ01000013.1 Genbank gene 65424 65798 . + . ID=gene-CLI86_06545;Name=CLI86_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06545 NSLJ01000013.1 Protein Homology CDS 65424 65798 . + 0 ID=cds-PDP43870.1;Parent=gene-CLI86_06545;Dbxref=NCBI_GP:PDP43870.1;Name=PDP43870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101470.1;locus_tag=CLI86_06545;product=50S ribosomal protein L7/L12;protein_id=PDP43870.1;transl_table=11 NSLJ01000013.1 Genbank gene 65915 69727 . + . ID=gene-CLI86_06550;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CLI86_06550 NSLJ01000013.1 Protein Homology CDS 65915 69727 . + 0 ID=cds-PDP43871.1;Parent=gene-CLI86_06550;Dbxref=NCBI_GP:PDP43871.1;Name=PDP43871.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007564161.1;locus_tag=CLI86_06550;product=DNA-directed RNA polymerase subunit beta;protein_id=PDP43871.1;transl_table=11 NSLJ01000013.1 Genbank gene 69756 74033 . + . ID=gene-CLI86_06555;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CLI86_06555 NSLJ01000013.1 Protein Homology CDS 69756 74033 . + 0 ID=cds-PDP43872.1;Parent=gene-CLI86_06555;Dbxref=NCBI_GP:PDP43872.1;Name=PDP43872.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225277.1;locus_tag=CLI86_06555;product=DNA-directed RNA polymerase subunit beta';protein_id=PDP43872.1;transl_table=11 NSLJ01000013.1 Genbank gene 74058 75593 . + . ID=gene-CLI86_06560;Name=CLI86_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06560 NSLJ01000013.1 Protein Homology CDS 74058 75593 . + 0 ID=cds-PDP43873.1;Parent=gene-CLI86_06560;Dbxref=NCBI_GP:PDP43873.1;Name=PDP43873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225278.1;locus_tag=CLI86_06560;product=DUF853 domain-containing protein;protein_id=PDP43873.1;transl_table=11 NSLJ01000013.1 Genbank gene 76016 77134 . + . ID=gene-CLI86_06565;Name=CLI86_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06565 NSLJ01000013.1 Protein Homology CDS 76016 77134 . + 0 ID=cds-PDP43888.1;Parent=gene-CLI86_06565;Dbxref=NCBI_GP:PDP43888.1;Name=PDP43888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815653.1;locus_tag=CLI86_06565;product=isochorismate synthase;protein_id=PDP43888.1;transl_table=11 NSLJ01000013.1 Genbank gene 77134 78867 . + . ID=gene-CLI86_06570;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CLI86_06570 NSLJ01000013.1 Protein Homology CDS 77134 78867 . + 0 ID=cds-PDP43874.1;Parent=gene-CLI86_06570;Dbxref=NCBI_GP:PDP43874.1;Name=PDP43874.1;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225281.1;locus_tag=CLI86_06570;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=PDP43874.1;transl_table=11 NSLJ01000013.1 Genbank gene 78886 79710 . + . ID=gene-CLI86_06575;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CLI86_06575 NSLJ01000013.1 Protein Homology CDS 78886 79710 . + 0 ID=cds-PDP43875.1;Parent=gene-CLI86_06575;Dbxref=NCBI_GP:PDP43875.1;Name=PDP43875.1;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815655.1;locus_tag=CLI86_06575;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=PDP43875.1;transl_table=11 NSLJ01000013.1 Genbank gene 79710 80780 . + . ID=gene-CLI86_06580;Name=CLI86_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06580 NSLJ01000013.1 Protein Homology CDS 79710 80780 . + 0 ID=cds-PDP43876.1;Parent=gene-CLI86_06580;Dbxref=NCBI_GP:PDP43876.1;Name=PDP43876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815656.1;locus_tag=CLI86_06580;product=o-succinylbenzoate synthase;protein_id=PDP43876.1;transl_table=11 NSLJ01000013.1 Genbank gene 80804 81853 . + . ID=gene-CLI86_06585;Name=CLI86_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06585 NSLJ01000013.1 Protein Homology CDS 80804 81853 . + 0 ID=cds-PDP43877.1;Parent=gene-CLI86_06585;Dbxref=NCBI_GP:PDP43877.1;Name=PDP43877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874674.1;locus_tag=CLI86_06585;product=O-succinylbenzoic acid--CoA ligase;protein_id=PDP43877.1;transl_table=11 NSLJ01000013.1 Genbank pseudogene 82046 82980 . - . ID=gene-CLI86_06590;Name=CLI86_06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_06590;pseudo=true NSLJ01000013.1 Protein Homology CDS 82046 82980 . - 0 ID=cds-CLI86_06590;Parent=gene-CLI86_06590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008675637.1;locus_tag=CLI86_06590;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000013.1 Genbank gene 83388 84611 . + . ID=gene-CLI86_06595;Name=CLI86_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06595 NSLJ01000013.1 Protein Homology CDS 83388 84611 . + 0 ID=cds-PDP43878.1;Parent=gene-CLI86_06595;Dbxref=NCBI_GP:PDP43878.1;Name=PDP43878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009433911.1;locus_tag=CLI86_06595;product=integrase;protein_id=PDP43878.1;transl_table=11 NSLJ01000013.1 Genbank gene 84941 85165 . + . ID=gene-CLI86_06600;Name=CLI86_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06600 NSLJ01000013.1 Protein Homology CDS 84941 85165 . + 0 ID=cds-PDP43879.1;Parent=gene-CLI86_06600;Dbxref=NCBI_GP:PDP43879.1;Name=PDP43879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008450231.1;locus_tag=CLI86_06600;product=XRE family transcriptional regulator;protein_id=PDP43879.1;transl_table=11 NSLJ01000013.1 Genbank gene 85155 86459 . + . ID=gene-CLI86_06605;Name=dndC;gbkey=Gene;gene=dndC;gene_biotype=protein_coding;locus_tag=CLI86_06605 NSLJ01000013.1 Protein Homology CDS 85155 86459 . + 0 ID=cds-PDP43880.1;Parent=gene-CLI86_06605;Dbxref=NCBI_GP:PDP43880.1;Name=PDP43880.1;gbkey=CDS;gene=dndC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007659347.1;locus_tag=CLI86_06605;product=DNA phosphorothioation system sulfurtransferase DndC;protein_id=PDP43880.1;transl_table=11 NSLJ01000013.1 Genbank gene 86456 86575 . - . ID=gene-CLI86_06610;Name=CLI86_06610;end_range=86575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06610;partial=true NSLJ01000013.1 Protein Homology CDS 86456 86575 . - 0 ID=cds-PDP43881.1;Parent=gene-CLI86_06610;Dbxref=NCBI_GP:PDP43881.1;Name=PDP43881.1;end_range=86575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_06610;partial=true;product=IS1 family transposase;protein_id=PDP43881.1;transl_table=11 ##sequence-region NSLJ01000139.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000139.1 Genbank region 1 227 . + . ID=NSLJ01000139.1:1..227;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000140.1 1 222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000140.1 Genbank region 1 222 . + . ID=NSLJ01000140.1:1..222;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000140.1 Genbank gene 1 222 . + . ID=gene-CLI86_14095;Name=CLI86_14095;end_range=222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_14095;partial=true;start_range=.,1 NSLJ01000140.1 GeneMarkS+ CDS 1 222 . + 0 ID=cds-PDP39715.1;Parent=gene-CLI86_14095;Dbxref=NCBI_GP:PDP39715.1;Name=PDP39715.1;end_range=222,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_14095;partial=true;product=hypothetical protein;protein_id=PDP39715.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000014.1 1 79152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000014.1 Genbank region 1 79152 . + . ID=NSLJ01000014.1:1..79152;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000014.1 Genbank gene 1 1179 . - . ID=gene-CLI86_06615;Name=CLI86_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06615;partial=true;start_range=.,1 NSLJ01000014.1 Protein Homology CDS 1 1179 . - 0 ID=cds-PDP43815.1;Parent=gene-CLI86_06615;Dbxref=NCBI_GP:PDP43815.1;Name=PDP43815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223896.1;locus_tag=CLI86_06615;partial=true;product=hypothetical protein;protein_id=PDP43815.1;start_range=.,1;transl_table=11 NSLJ01000014.1 Genbank gene 1955 2899 . - . ID=gene-CLI86_06620;Name=CLI86_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06620 NSLJ01000014.1 Protein Homology CDS 1955 2899 . - 0 ID=cds-PDP43761.1;Parent=gene-CLI86_06620;Dbxref=NCBI_GP:PDP43761.1;Name=PDP43761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223894.1;locus_tag=CLI86_06620;product=YitT family protein;protein_id=PDP43761.1;transl_table=11 NSLJ01000014.1 Genbank gene 2918 4438 . - . ID=gene-CLI86_06625;Name=CLI86_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06625 NSLJ01000014.1 Protein Homology CDS 2918 4438 . - 0 ID=cds-PDP43762.1;Parent=gene-CLI86_06625;Dbxref=NCBI_GP:PDP43762.1;Name=PDP43762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098253.1;locus_tag=CLI86_06625;product=glutamine-hydrolyzing GMP synthase;protein_id=PDP43762.1;transl_table=11 NSLJ01000014.1 Genbank gene 4547 5443 . + . ID=gene-CLI86_06630;Name=CLI86_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06630 NSLJ01000014.1 Protein Homology CDS 4547 5443 . + 0 ID=cds-PDP43763.1;Parent=gene-CLI86_06630;Dbxref=NCBI_GP:PDP43763.1;Name=PDP43763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865736.1;locus_tag=CLI86_06630;product=hypothetical protein;protein_id=PDP43763.1;transl_table=11 NSLJ01000014.1 Genbank gene 5542 6435 . + . ID=gene-CLI86_06635;Name=CLI86_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06635 NSLJ01000014.1 Protein Homology CDS 5542 6435 . + 0 ID=cds-PDP43816.1;Parent=gene-CLI86_06635;Dbxref=NCBI_GP:PDP43816.1;Name=PDP43816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150320.1;locus_tag=CLI86_06635;product=sugar phosphate isomerase;protein_id=PDP43816.1;transl_table=11 NSLJ01000014.1 Genbank gene 6653 8602 . + . ID=gene-CLI86_06640;Name=CLI86_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06640 NSLJ01000014.1 Protein Homology CDS 6653 8602 . + 0 ID=cds-PDP43764.1;Parent=gene-CLI86_06640;Dbxref=NCBI_GP:PDP43764.1;Name=PDP43764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223888.1;locus_tag=CLI86_06640;product=transglutaminase;protein_id=PDP43764.1;transl_table=11 NSLJ01000014.1 Genbank gene 8621 10255 . + . ID=gene-CLI86_06645;Name=CLI86_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06645 NSLJ01000014.1 Protein Homology CDS 8621 10255 . + 0 ID=cds-PDP43765.1;Parent=gene-CLI86_06645;Dbxref=NCBI_GP:PDP43765.1;Name=PDP43765.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12969.5;locus_tag=CLI86_06645;product=hypothetical protein;protein_id=PDP43765.1;transl_table=11 NSLJ01000014.1 Genbank gene 10521 12029 . + . ID=gene-CLI86_06650;Name=CLI86_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06650 NSLJ01000014.1 Protein Homology CDS 10521 12029 . + 0 ID=cds-PDP43766.1;Parent=gene-CLI86_06650;Dbxref=NCBI_GP:PDP43766.1;Name=PDP43766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866098.1;locus_tag=CLI86_06650;product=deoxyribonuclease HsdR;protein_id=PDP43766.1;transl_table=11 NSLJ01000014.1 Genbank gene 12147 13007 . + . ID=gene-CLI86_06655;Name=CLI86_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06655 NSLJ01000014.1 Protein Homology CDS 12147 13007 . + 0 ID=cds-PDP43767.1;Parent=gene-CLI86_06655;Dbxref=NCBI_GP:PDP43767.1;Name=PDP43767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008625412.1;locus_tag=CLI86_06655;product=RNA polymerase subunit sigma;protein_id=PDP43767.1;transl_table=11 NSLJ01000014.1 Genbank gene 13155 14420 . - . ID=gene-CLI86_06660;Name=CLI86_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06660 NSLJ01000014.1 Protein Homology CDS 13155 14420 . - 0 ID=cds-PDP43768.1;Parent=gene-CLI86_06660;Dbxref=NCBI_GP:PDP43768.1;Name=PDP43768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658561.1;locus_tag=CLI86_06660;product=competence protein;protein_id=PDP43768.1;transl_table=11 NSLJ01000014.1 Genbank gene 14444 15094 . - . ID=gene-CLI86_06665;Name=CLI86_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06665 NSLJ01000014.1 Protein Homology CDS 14444 15094 . - 0 ID=cds-PDP43769.1;Parent=gene-CLI86_06665;Dbxref=NCBI_GP:PDP43769.1;Name=PDP43769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858155.1;locus_tag=CLI86_06665;product=ribulose-phosphate 3-epimerase;protein_id=PDP43769.1;transl_table=11 NSLJ01000014.1 Genbank gene 15207 15392 . - . ID=gene-CLI86_06670;Name=CLI86_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06670 NSLJ01000014.1 GeneMarkS+ CDS 15207 15392 . - 0 ID=cds-PDP43770.1;Parent=gene-CLI86_06670;Dbxref=NCBI_GP:PDP43770.1;Name=PDP43770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06670;product=hypothetical protein;protein_id=PDP43770.1;transl_table=11 NSLJ01000014.1 Genbank gene 15490 16083 . - . ID=gene-CLI86_06675;Name=CLI86_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06675 NSLJ01000014.1 Protein Homology CDS 15490 16083 . - 0 ID=cds-PDP43771.1;Parent=gene-CLI86_06675;Dbxref=NCBI_GP:PDP43771.1;Name=PDP43771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658568.1;locus_tag=CLI86_06675;product=RNA polymerase subunit sigma-24;protein_id=PDP43771.1;transl_table=11 NSLJ01000014.1 Genbank gene 16301 17911 . - . ID=gene-CLI86_06680;Name=CLI86_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06680 NSLJ01000014.1 Protein Homology CDS 16301 17911 . - 0 ID=cds-PDP43772.1;Parent=gene-CLI86_06680;Dbxref=NCBI_GP:PDP43772.1;Name=PDP43772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644125.1;locus_tag=CLI86_06680;product=hypothetical protein;protein_id=PDP43772.1;transl_table=11 NSLJ01000014.1 Genbank gene 18008 19360 . - . ID=gene-CLI86_06685;Name=CLI86_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06685 NSLJ01000014.1 Protein Homology CDS 18008 19360 . - 0 ID=cds-PDP43773.1;Parent=gene-CLI86_06685;Dbxref=NCBI_GP:PDP43773.1;Name=PDP43773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779584.1;locus_tag=CLI86_06685;product=hypothetical protein;protein_id=PDP43773.1;transl_table=11 NSLJ01000014.1 Genbank gene 20086 20718 . + . ID=gene-CLI86_06690;Name=CLI86_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06690 NSLJ01000014.1 GeneMarkS+ CDS 20086 20718 . + 0 ID=cds-PDP43774.1;Parent=gene-CLI86_06690;Dbxref=NCBI_GP:PDP43774.1;Name=PDP43774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06690;product=hypothetical protein;protein_id=PDP43774.1;transl_table=11 NSLJ01000014.1 Genbank gene 20703 21686 . + . ID=gene-CLI86_06695;Name=CLI86_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06695 NSLJ01000014.1 Protein Homology CDS 20703 21686 . + 0 ID=cds-PDP43775.1;Parent=gene-CLI86_06695;Dbxref=NCBI_GP:PDP43775.1;Name=PDP43775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14054.4;locus_tag=CLI86_06695;product=DUF4249 domain-containing protein;protein_id=PDP43775.1;transl_table=11 NSLJ01000014.1 Genbank gene 21677 23806 . + . ID=gene-CLI86_06700;Name=CLI86_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06700 NSLJ01000014.1 Protein Homology CDS 21677 23806 . + 0 ID=cds-PDP43776.1;Parent=gene-CLI86_06700;Dbxref=NCBI_GP:PDP43776.1;Name=PDP43776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07715.13;locus_tag=CLI86_06700;product=hypothetical protein;protein_id=PDP43776.1;transl_table=11 NSLJ01000014.1 Genbank gene 24001 24189 . + . ID=gene-CLI86_06705;Name=CLI86_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06705 NSLJ01000014.1 GeneMarkS+ CDS 24001 24189 . + 0 ID=cds-PDP43777.1;Parent=gene-CLI86_06705;Dbxref=NCBI_GP:PDP43777.1;Name=PDP43777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06705;product=hypothetical protein;protein_id=PDP43777.1;transl_table=11 NSLJ01000014.1 Genbank gene 24180 24256 . + . ID=gene-CLI86_06710;Name=CLI86_06710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_06710 NSLJ01000014.1 tRNAscan-SE tRNA 24180 24256 . + . ID=rna-CLI86_06710;Parent=gene-CLI86_06710;anticodon=(pos:24214..24216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06710;product=tRNA-Pro NSLJ01000014.1 tRNAscan-SE exon 24180 24256 . + . ID=exon-CLI86_06710-1;Parent=rna-CLI86_06710;anticodon=(pos:24214..24216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_06710;product=tRNA-Pro NSLJ01000014.1 Genbank gene 24493 25155 . + . ID=gene-CLI86_06715;Name=CLI86_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06715 NSLJ01000014.1 Protein Homology CDS 24493 25155 . + 0 ID=cds-PDP43778.1;Parent=gene-CLI86_06715;Dbxref=NCBI_GP:PDP43778.1;Name=PDP43778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223871.1;locus_tag=CLI86_06715;product=HAD family hydrolase;protein_id=PDP43778.1;transl_table=11 NSLJ01000014.1 Genbank gene 25216 26709 . + . ID=gene-CLI86_06720;Name=CLI86_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06720 NSLJ01000014.1 Protein Homology CDS 25216 26709 . + 0 ID=cds-PDP43779.1;Parent=gene-CLI86_06720;Dbxref=NCBI_GP:PDP43779.1;Name=PDP43779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965508.1;locus_tag=CLI86_06720;product=acetyl-CoA hydrolase;protein_id=PDP43779.1;transl_table=11 NSLJ01000014.1 Genbank gene 26765 28798 . + . ID=gene-CLI86_06725;Name=CLI86_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06725 NSLJ01000014.1 Protein Homology CDS 26765 28798 . + 0 ID=cds-PDP43780.1;Parent=gene-CLI86_06725;Dbxref=NCBI_GP:PDP43780.1;Name=PDP43780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223869.1;locus_tag=CLI86_06725;product=transketolase;protein_id=PDP43780.1;transl_table=11 NSLJ01000014.1 Genbank gene 28809 29252 . + . ID=gene-CLI86_06730;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=CLI86_06730 NSLJ01000014.1 Protein Homology CDS 28809 29252 . + 0 ID=cds-PDP43781.1;Parent=gene-CLI86_06730;Dbxref=NCBI_GP:PDP43781.1;Name=PDP43781.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223868.1;locus_tag=CLI86_06730;product=ribose 5-phosphate isomerase B;protein_id=PDP43781.1;transl_table=11 NSLJ01000014.1 Genbank gene 29368 30345 . - . ID=gene-CLI86_06735;Name=CLI86_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06735 NSLJ01000014.1 Protein Homology CDS 29368 30345 . - 0 ID=cds-PDP43782.1;Parent=gene-CLI86_06735;Dbxref=NCBI_GP:PDP43782.1;Name=PDP43782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861353.1;locus_tag=CLI86_06735;product=GNAT family N-acetyltransferase;protein_id=PDP43782.1;transl_table=11 NSLJ01000014.1 Genbank gene 30350 31177 . - . ID=gene-CLI86_06740;Name=CLI86_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06740 NSLJ01000014.1 Protein Homology CDS 30350 31177 . - 0 ID=cds-PDP43783.1;Parent=gene-CLI86_06740;Dbxref=NCBI_GP:PDP43783.1;Name=PDP43783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223866.1;locus_tag=CLI86_06740;product=glycerol acyltransferase;protein_id=PDP43783.1;transl_table=11 NSLJ01000014.1 Genbank gene 31443 32357 . + . ID=gene-CLI86_06745;Name=CLI86_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06745 NSLJ01000014.1 Protein Homology CDS 31443 32357 . + 0 ID=cds-PDP43784.1;Parent=gene-CLI86_06745;Dbxref=NCBI_GP:PDP43784.1;Name=PDP43784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859919.1;locus_tag=CLI86_06745;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=PDP43784.1;transl_table=11 NSLJ01000014.1 Genbank gene 32371 32718 . + . ID=gene-CLI86_06750;Name=CLI86_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06750 NSLJ01000014.1 Protein Homology CDS 32371 32718 . + 0 ID=cds-PDP43817.1;Parent=gene-CLI86_06750;Dbxref=NCBI_GP:PDP43817.1;Name=PDP43817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223864.1;locus_tag=CLI86_06750;product=hypothetical protein;protein_id=PDP43817.1;transl_table=11 NSLJ01000014.1 Genbank gene 32725 34935 . + . ID=gene-CLI86_06755;Name=CLI86_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06755 NSLJ01000014.1 Protein Homology CDS 32725 34935 . + 0 ID=cds-PDP43785.1;Parent=gene-CLI86_06755;Dbxref=NCBI_GP:PDP43785.1;Name=PDP43785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223863.1;locus_tag=CLI86_06755;product=penicillin-binding protein;protein_id=PDP43785.1;transl_table=11 NSLJ01000014.1 Genbank gene 34948 36411 . + . ID=gene-CLI86_06760;Name=CLI86_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06760 NSLJ01000014.1 Protein Homology CDS 34948 36411 . + 0 ID=cds-PDP43786.1;Parent=gene-CLI86_06760;Dbxref=NCBI_GP:PDP43786.1;Name=PDP43786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223862.1;locus_tag=CLI86_06760;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=PDP43786.1;transl_table=11 NSLJ01000014.1 Genbank gene 36419 37684 . + . ID=gene-CLI86_06765;Name=CLI86_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06765 NSLJ01000014.1 Protein Homology CDS 36419 37684 . + 0 ID=cds-PDP43787.1;Parent=gene-CLI86_06765;Dbxref=NCBI_GP:PDP43787.1;Name=PDP43787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861367.1;locus_tag=CLI86_06765;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=PDP43787.1;transl_table=11 NSLJ01000014.1 Genbank gene 37687 39024 . + . ID=gene-CLI86_06770;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CLI86_06770 NSLJ01000014.1 Protein Homology CDS 37687 39024 . + 0 ID=cds-PDP43788.1;Parent=gene-CLI86_06770;Dbxref=NCBI_GP:PDP43788.1;Name=PDP43788.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780721.1;locus_tag=CLI86_06770;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=PDP43788.1;transl_table=11 NSLJ01000014.1 Genbank gene 39038 40345 . + . ID=gene-CLI86_06775;Name=CLI86_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06775 NSLJ01000014.1 Protein Homology CDS 39038 40345 . + 0 ID=cds-PDP43789.1;Parent=gene-CLI86_06775;Dbxref=NCBI_GP:PDP43789.1;Name=PDP43789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223859.1;locus_tag=CLI86_06775;product=rod shape-determining protein RodA;protein_id=PDP43789.1;transl_table=11 NSLJ01000014.1 Genbank gene 40332 41447 . + . ID=gene-CLI86_06780;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CLI86_06780 NSLJ01000014.1 Protein Homology CDS 40332 41447 . + 0 ID=cds-PDP43790.1;Parent=gene-CLI86_06780;Dbxref=NCBI_GP:PDP43790.1;Name=PDP43790.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634302.1;locus_tag=CLI86_06780;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=PDP43790.1;transl_table=11 NSLJ01000014.1 Genbank gene 41444 42823 . + . ID=gene-CLI86_06785;Name=CLI86_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06785 NSLJ01000014.1 Protein Homology CDS 41444 42823 . + 0 ID=cds-PDP43791.1;Parent=gene-CLI86_06785;Dbxref=NCBI_GP:PDP43791.1;Name=PDP43791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223858.1;locus_tag=CLI86_06785;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=PDP43791.1;transl_table=11 NSLJ01000014.1 Genbank gene 42820 43548 . + . ID=gene-CLI86_06790;Name=CLI86_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06790 NSLJ01000014.1 Protein Homology CDS 42820 43548 . + 0 ID=cds-PDP43792.1;Parent=gene-CLI86_06790;Dbxref=NCBI_GP:PDP43792.1;Name=PDP43792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859910.1;locus_tag=CLI86_06790;product=cell division protein FtsQ;protein_id=PDP43792.1;transl_table=11 NSLJ01000014.1 Genbank gene 43553 44875 . + . ID=gene-CLI86_06795;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CLI86_06795 NSLJ01000014.1 Protein Homology CDS 43553 44875 . + 0 ID=cds-PDP43793.1;Parent=gene-CLI86_06795;Dbxref=NCBI_GP:PDP43793.1;Name=PDP43793.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223856.1;locus_tag=CLI86_06795;product=cell division protein FtsA;protein_id=PDP43793.1;transl_table=11 NSLJ01000014.1 Genbank gene 44888 46261 . + . ID=gene-CLI86_06800;Name=CLI86_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06800 NSLJ01000014.1 Protein Homology CDS 44888 46261 . + 0 ID=cds-PDP43794.1;Parent=gene-CLI86_06800;Dbxref=NCBI_GP:PDP43794.1;Name=PDP43794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223855.1;locus_tag=CLI86_06800;product=cell division protein FtsZ;protein_id=PDP43794.1;transl_table=11 NSLJ01000014.1 Genbank gene 46295 46744 . + . ID=gene-CLI86_06805;Name=CLI86_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06805 NSLJ01000014.1 Protein Homology CDS 46295 46744 . + 0 ID=cds-PDP43795.1;Parent=gene-CLI86_06805;Dbxref=NCBI_GP:PDP43795.1;Name=PDP43795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942510.1;locus_tag=CLI86_06805;product=glutamyl-tRNA amidotransferase;protein_id=PDP43795.1;transl_table=11 NSLJ01000014.1 Genbank gene 46949 48709 . - . ID=gene-CLI86_06810;Name=CLI86_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06810 NSLJ01000014.1 Protein Homology CDS 46949 48709 . - 0 ID=cds-PDP43796.1;Parent=gene-CLI86_06810;Dbxref=NCBI_GP:PDP43796.1;Name=PDP43796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867851.1;locus_tag=CLI86_06810;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43796.1;transl_table=11 NSLJ01000014.1 Genbank gene 48742 52017 . - . ID=gene-CLI86_06815;Name=CLI86_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06815 NSLJ01000014.1 Protein Homology CDS 48742 52017 . - 0 ID=cds-PDP43797.1;Parent=gene-CLI86_06815;Dbxref=NCBI_GP:PDP43797.1;Name=PDP43797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008771785.1;locus_tag=CLI86_06815;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43797.1;transl_table=11 NSLJ01000014.1 Genbank gene 52299 52931 . + . ID=gene-CLI86_06820;Name=CLI86_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06820 NSLJ01000014.1 Protein Homology CDS 52299 52931 . + 0 ID=cds-PDP43798.1;Parent=gene-CLI86_06820;Dbxref=NCBI_GP:PDP43798.1;Name=PDP43798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223850.1;locus_tag=CLI86_06820;product=hypothetical protein;protein_id=PDP43798.1;transl_table=11 NSLJ01000014.1 Genbank gene 53106 55718 . - . ID=gene-CLI86_06825;Name=CLI86_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06825 NSLJ01000014.1 Protein Homology CDS 53106 55718 . - 0 ID=cds-PDP43799.1;Parent=gene-CLI86_06825;Dbxref=NCBI_GP:PDP43799.1;Name=PDP43799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224212.1;locus_tag=CLI86_06825;product=hypothetical protein;protein_id=PDP43799.1;transl_table=11 NSLJ01000014.1 Genbank gene 55729 56574 . - . ID=gene-CLI86_06830;Name=CLI86_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06830 NSLJ01000014.1 Protein Homology CDS 55729 56574 . - 0 ID=cds-PDP43800.1;Parent=gene-CLI86_06830;Dbxref=NCBI_GP:PDP43800.1;Name=PDP43800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01200;locus_tag=CLI86_06830;product=GLPGLI family protein;protein_id=PDP43800.1;transl_table=11 NSLJ01000014.1 Genbank gene 56687 56896 . - . ID=gene-CLI86_06835;Name=CLI86_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06835 NSLJ01000014.1 GeneMarkS+ CDS 56687 56896 . - 0 ID=cds-PDP43801.1;Parent=gene-CLI86_06835;Dbxref=NCBI_GP:PDP43801.1;Name=PDP43801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06835;product=hypothetical protein;protein_id=PDP43801.1;transl_table=11 NSLJ01000014.1 Genbank gene 57027 60215 . - . ID=gene-CLI86_06840;Name=CLI86_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06840 NSLJ01000014.1 Protein Homology CDS 57027 60215 . - 0 ID=cds-PDP43802.1;Parent=gene-CLI86_06840;Dbxref=NCBI_GP:PDP43802.1;Name=PDP43802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223847.1;locus_tag=CLI86_06840;product=multidrug efflux pump protein;protein_id=PDP43802.1;transl_table=11 NSLJ01000014.1 Genbank gene 60216 61739 . - . ID=gene-CLI86_06845;Name=CLI86_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06845 NSLJ01000014.1 Protein Homology CDS 60216 61739 . - 0 ID=cds-PDP43803.1;Parent=gene-CLI86_06845;Dbxref=NCBI_GP:PDP43803.1;Name=PDP43803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223846.1;locus_tag=CLI86_06845;product=hypothetical protein;protein_id=PDP43803.1;transl_table=11 NSLJ01000014.1 Genbank gene 61749 64841 . - . ID=gene-CLI86_06850;Name=CLI86_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06850 NSLJ01000014.1 Protein Homology CDS 61749 64841 . - 0 ID=cds-PDP43804.1;Parent=gene-CLI86_06850;Dbxref=NCBI_GP:PDP43804.1;Name=PDP43804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223845.1;locus_tag=CLI86_06850;product=cation transporter;protein_id=PDP43804.1;transl_table=11 NSLJ01000014.1 Genbank gene 65014 65460 . - . ID=gene-CLI86_06855;Name=CLI86_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06855 NSLJ01000014.1 Protein Homology CDS 65014 65460 . - 0 ID=cds-PDP43805.1;Parent=gene-CLI86_06855;Dbxref=NCBI_GP:PDP43805.1;Name=PDP43805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223843.1;locus_tag=CLI86_06855;product=transposase;protein_id=PDP43805.1;transl_table=11 NSLJ01000014.1 Genbank gene 65581 66048 . + . ID=gene-CLI86_06860;Name=CLI86_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06860 NSLJ01000014.1 GeneMarkS+ CDS 65581 66048 . + 0 ID=cds-PDP43806.1;Parent=gene-CLI86_06860;Dbxref=NCBI_GP:PDP43806.1;Name=PDP43806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06860;product=hypothetical protein;protein_id=PDP43806.1;transl_table=11 NSLJ01000014.1 Genbank gene 66172 67080 . + . ID=gene-CLI86_06865;Name=CLI86_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06865 NSLJ01000014.1 GeneMarkS+ CDS 66172 67080 . + 0 ID=cds-PDP43807.1;Parent=gene-CLI86_06865;Dbxref=NCBI_GP:PDP43807.1;Name=PDP43807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06865;product=hypothetical protein;protein_id=PDP43807.1;transl_table=11 NSLJ01000014.1 Genbank gene 67230 68396 . - . ID=gene-CLI86_06870;Name=CLI86_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06870 NSLJ01000014.1 Protein Homology CDS 67230 68396 . - 0 ID=cds-PDP43808.1;Parent=gene-CLI86_06870;Dbxref=NCBI_GP:PDP43808.1;Name=PDP43808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223841.1;locus_tag=CLI86_06870;product=6-bladed beta-propeller;protein_id=PDP43808.1;transl_table=11 NSLJ01000014.1 Genbank gene 68449 69540 . - . ID=gene-CLI86_06875;Name=CLI86_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06875 NSLJ01000014.1 Protein Homology CDS 68449 69540 . - 0 ID=cds-PDP43818.1;Parent=gene-CLI86_06875;Dbxref=NCBI_GP:PDP43818.1;Name=PDP43818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640616.1;locus_tag=CLI86_06875;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP43818.1;transl_table=11 NSLJ01000014.1 Genbank gene 69877 70908 . + . ID=gene-CLI86_06880;Name=CLI86_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06880 NSLJ01000014.1 Protein Homology CDS 69877 70908 . + 0 ID=cds-PDP43809.1;Parent=gene-CLI86_06880;Dbxref=NCBI_GP:PDP43809.1;Name=PDP43809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223838.1;locus_tag=CLI86_06880;product=Holliday junction branch migration DNA helicase RuvB;protein_id=PDP43809.1;transl_table=11 NSLJ01000014.1 Genbank gene 70914 72428 . + . ID=gene-CLI86_06885;Name=CLI86_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06885 NSLJ01000014.1 Protein Homology CDS 70914 72428 . + 0 ID=cds-PDP43810.1;Parent=gene-CLI86_06885;Dbxref=NCBI_GP:PDP43810.1;Name=PDP43810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223837.1;locus_tag=CLI86_06885;product=polysaccharide biosynthesis protein;protein_id=PDP43810.1;transl_table=11 NSLJ01000014.1 Genbank gene 72428 73789 . + . ID=gene-CLI86_06890;Name=CLI86_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06890 NSLJ01000014.1 Protein Homology CDS 72428 73789 . + 0 ID=cds-PDP43811.1;Parent=gene-CLI86_06890;Dbxref=NCBI_GP:PDP43811.1;Name=PDP43811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223836.1;locus_tag=CLI86_06890;product=TIGR00341 family protein;protein_id=PDP43811.1;transl_table=11 NSLJ01000014.1 Genbank gene 73786 75936 . + . ID=gene-CLI86_06895;Name=CLI86_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06895 NSLJ01000014.1 Protein Homology CDS 73786 75936 . + 0 ID=cds-PDP43812.1;Parent=gene-CLI86_06895;Dbxref=NCBI_GP:PDP43812.1;Name=PDP43812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860555.1;locus_tag=CLI86_06895;product=peptidase S10;protein_id=PDP43812.1;transl_table=11 NSLJ01000014.1 Genbank gene 75953 76945 . + . ID=gene-CLI86_06900;Name=CLI86_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06900 NSLJ01000014.1 Protein Homology CDS 75953 76945 . + 0 ID=cds-PDP43813.1;Parent=gene-CLI86_06900;Dbxref=NCBI_GP:PDP43813.1;Name=PDP43813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005834737.1;locus_tag=CLI86_06900;product=glycosyl transferase family 2;protein_id=PDP43813.1;transl_table=11 NSLJ01000014.1 Genbank gene 77084 78169 . - . ID=gene-CLI86_06905;Name=CLI86_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06905 NSLJ01000014.1 Protein Homology CDS 77084 78169 . - 0 ID=cds-PDP43814.1;Parent=gene-CLI86_06905;Dbxref=NCBI_GP:PDP43814.1;Name=PDP43814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223833.1;locus_tag=CLI86_06905;product=6-bladed beta-propeller;protein_id=PDP43814.1;transl_table=11 NSLJ01000014.1 Genbank gene 78248 79141 . - . ID=gene-CLI86_06910;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_06910 NSLJ01000014.1 Protein Homology CDS 78248 79141 . - 0 ID=cds-PDP43819.1;Parent=gene-CLI86_06910;Dbxref=NCBI_GP:PDP43819.1;Name=PDP43819.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223832.1;locus_tag=CLI86_06910;product=signal peptidase I;protein_id=PDP43819.1;transl_table=11 ##sequence-region NSLJ01000015.1 1 79017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000015.1 Genbank region 1 79017 . + . ID=NSLJ01000015.1:1..79017;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000015.1 Genbank gene 628 1242 . + . ID=gene-CLI86_06915;Name=CLI86_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06915 NSLJ01000015.1 Protein Homology CDS 628 1242 . + 0 ID=cds-PDP43686.1;Parent=gene-CLI86_06915;Dbxref=NCBI_GP:PDP43686.1;Name=PDP43686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224324.1;locus_tag=CLI86_06915;product=DUF4254 domain-containing protein;protein_id=PDP43686.1;transl_table=11 NSLJ01000015.1 Genbank gene 1252 2313 . + . ID=gene-CLI86_06920;Name=CLI86_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06920 NSLJ01000015.1 Protein Homology CDS 1252 2313 . + 0 ID=cds-PDP43687.1;Parent=gene-CLI86_06920;Dbxref=NCBI_GP:PDP43687.1;Name=PDP43687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224325.1;locus_tag=CLI86_06920;product=heptosyltransferase;protein_id=PDP43687.1;transl_table=11 NSLJ01000015.1 Genbank gene 2365 2892 . - . ID=gene-CLI86_06925;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=CLI86_06925 NSLJ01000015.1 Protein Homology CDS 2365 2892 . - 0 ID=cds-PDP43688.1;Parent=gene-CLI86_06925;Dbxref=NCBI_GP:PDP43688.1;Name=PDP43688.1;gbkey=CDS;gene=cobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005653220.1;locus_tag=CLI86_06925;product=alpha-ribazole phosphatase;protein_id=PDP43688.1;transl_table=11 NSLJ01000015.1 Genbank gene 2877 3668 . - . ID=gene-CLI86_06930;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CLI86_06930 NSLJ01000015.1 Protein Homology CDS 2877 3668 . - 0 ID=cds-PDP43689.1;Parent=gene-CLI86_06930;Dbxref=NCBI_GP:PDP43689.1;Name=PDP43689.1;gbkey=CDS;gene=cobS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009038526.1;locus_tag=CLI86_06930;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=PDP43689.1;transl_table=11 NSLJ01000015.1 Genbank gene 3671 4711 . - . ID=gene-CLI86_06935;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CLI86_06935 NSLJ01000015.1 Protein Homology CDS 3671 4711 . - 0 ID=cds-PDP43690.1;Parent=gene-CLI86_06935;Dbxref=NCBI_GP:PDP43690.1;Name=PDP43690.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224328.1;locus_tag=CLI86_06935;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=PDP43690.1;transl_table=11 NSLJ01000015.1 Genbank gene 4813 5496 . - . ID=gene-CLI86_06940;Name=CLI86_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06940 NSLJ01000015.1 GeneMarkS+ CDS 4813 5496 . - 0 ID=cds-PDP43691.1;Parent=gene-CLI86_06940;Dbxref=NCBI_GP:PDP43691.1;Name=PDP43691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06940;product=hypothetical protein;protein_id=PDP43691.1;transl_table=11 NSLJ01000015.1 Genbank gene 5643 6236 . + . ID=gene-CLI86_06945;Name=CLI86_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06945 NSLJ01000015.1 Protein Homology CDS 5643 6236 . + 0 ID=cds-PDP43692.1;Parent=gene-CLI86_06945;Dbxref=NCBI_GP:PDP43692.1;Name=PDP43692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004370348.1;locus_tag=CLI86_06945;product=TetR family transcriptional regulator;protein_id=PDP43692.1;transl_table=11 NSLJ01000015.1 Genbank gene 6272 7252 . + . ID=gene-CLI86_06950;Name=CLI86_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06950 NSLJ01000015.1 Protein Homology CDS 6272 7252 . + 0 ID=cds-PDP43693.1;Parent=gene-CLI86_06950;Dbxref=NCBI_GP:PDP43693.1;Name=PDP43693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965981.1;locus_tag=CLI86_06950;product=nitroreductase;protein_id=PDP43693.1;transl_table=11 NSLJ01000015.1 Genbank gene 7393 8085 . + . ID=gene-CLI86_06955;Name=CLI86_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06955 NSLJ01000015.1 Protein Homology CDS 7393 8085 . + 0 ID=cds-PDP43694.1;Parent=gene-CLI86_06955;Dbxref=NCBI_GP:PDP43694.1;Name=PDP43694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224332.1;locus_tag=CLI86_06955;product=NAD-dependent deacylase;protein_id=PDP43694.1;transl_table=11 NSLJ01000015.1 Genbank gene 8200 9498 . - . ID=gene-CLI86_06960;Name=CLI86_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06960 NSLJ01000015.1 Protein Homology CDS 8200 9498 . - 0 ID=cds-PDP43695.1;Parent=gene-CLI86_06960;Dbxref=NCBI_GP:PDP43695.1;Name=PDP43695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224333.1;locus_tag=CLI86_06960;product=ATPase;protein_id=PDP43695.1;transl_table=11 NSLJ01000015.1 Genbank gene 9992 11587 . - . ID=gene-CLI86_06965;Name=CLI86_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06965 NSLJ01000015.1 GeneMarkS+ CDS 9992 11587 . - 0 ID=cds-PDP43696.1;Parent=gene-CLI86_06965;Dbxref=NCBI_GP:PDP43696.1;Name=PDP43696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06965;product=hypothetical protein;protein_id=PDP43696.1;transl_table=11 NSLJ01000015.1 Genbank gene 11688 11912 . - . ID=gene-CLI86_06970;Name=CLI86_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06970 NSLJ01000015.1 GeneMarkS+ CDS 11688 11912 . - 0 ID=cds-PDP43697.1;Parent=gene-CLI86_06970;Dbxref=NCBI_GP:PDP43697.1;Name=PDP43697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06970;product=hypothetical protein;protein_id=PDP43697.1;transl_table=11 NSLJ01000015.1 Genbank gene 11929 12522 . - . ID=gene-CLI86_06975;Name=CLI86_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06975 NSLJ01000015.1 Protein Homology CDS 11929 12522 . - 0 ID=cds-PDP43698.1;Parent=gene-CLI86_06975;Dbxref=NCBI_GP:PDP43698.1;Name=PDP43698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367646.1;locus_tag=CLI86_06975;product=HAD-IB family hydrolase;protein_id=PDP43698.1;transl_table=11 NSLJ01000015.1 Genbank gene 12527 13420 . - . ID=gene-CLI86_06980;Name=CLI86_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06980 NSLJ01000015.1 Protein Homology CDS 12527 13420 . - 0 ID=cds-PDP43699.1;Parent=gene-CLI86_06980;Dbxref=NCBI_GP:PDP43699.1;Name=PDP43699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224338.1;locus_tag=CLI86_06980;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=PDP43699.1;transl_table=11 NSLJ01000015.1 Genbank gene 14131 14697 . + . ID=gene-CLI86_06985;Name=CLI86_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06985 NSLJ01000015.1 Protein Homology CDS 14131 14697 . + 0 ID=cds-PDP43700.1;Parent=gene-CLI86_06985;Dbxref=NCBI_GP:PDP43700.1;Name=PDP43700.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14060.4;locus_tag=CLI86_06985;product=hypothetical protein;protein_id=PDP43700.1;transl_table=11 NSLJ01000015.1 Genbank gene 14710 15198 . + . ID=gene-CLI86_06990;Name=CLI86_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06990 NSLJ01000015.1 Protein Homology CDS 14710 15198 . + 0 ID=cds-PDP43701.1;Parent=gene-CLI86_06990;Dbxref=NCBI_GP:PDP43701.1;Name=PDP43701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224343.1;locus_tag=CLI86_06990;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP43701.1;transl_table=11 NSLJ01000015.1 Genbank gene 15202 15720 . + . ID=gene-CLI86_06995;Name=CLI86_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_06995 NSLJ01000015.1 GeneMarkS+ CDS 15202 15720 . + 0 ID=cds-PDP43702.1;Parent=gene-CLI86_06995;Dbxref=NCBI_GP:PDP43702.1;Name=PDP43702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_06995;product=hypothetical protein;protein_id=PDP43702.1;transl_table=11 NSLJ01000015.1 Genbank gene 15722 16210 . + . ID=gene-CLI86_07000;Name=CLI86_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07000 NSLJ01000015.1 Protein Homology CDS 15722 16210 . + 0 ID=cds-PDP43703.1;Parent=gene-CLI86_07000;Dbxref=NCBI_GP:PDP43703.1;Name=PDP43703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14060.4;locus_tag=CLI86_07000;product=DUF4252 domain-containing protein;protein_id=PDP43703.1;transl_table=11 NSLJ01000015.1 Genbank gene 16255 17799 . + . ID=gene-CLI86_07005;Name=CLI86_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07005 NSLJ01000015.1 Protein Homology CDS 16255 17799 . + 0 ID=cds-PDP43704.1;Parent=gene-CLI86_07005;Dbxref=NCBI_GP:PDP43704.1;Name=PDP43704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224346.1;locus_tag=CLI86_07005;product=two-component system response regulator;protein_id=PDP43704.1;transl_table=11 NSLJ01000015.1 Genbank gene 17796 18218 . + . ID=gene-CLI86_07010;Name=CLI86_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07010 NSLJ01000015.1 Protein Homology CDS 17796 18218 . + 0 ID=cds-PDP43705.1;Parent=gene-CLI86_07010;Dbxref=NCBI_GP:PDP43705.1;Name=PDP43705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224347.1;locus_tag=CLI86_07010;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=PDP43705.1;transl_table=11 NSLJ01000015.1 Genbank gene 18212 19348 . - . ID=gene-CLI86_07015;Name=CLI86_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07015 NSLJ01000015.1 Protein Homology CDS 18212 19348 . - 0 ID=cds-PDP43706.1;Parent=gene-CLI86_07015;Dbxref=NCBI_GP:PDP43706.1;Name=PDP43706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639980.1;locus_tag=CLI86_07015;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=PDP43706.1;transl_table=11 NSLJ01000015.1 Genbank gene 19345 21405 . - . ID=gene-CLI86_07020;Name=CLI86_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07020 NSLJ01000015.1 Protein Homology CDS 19345 21405 . - 0 ID=cds-PDP43707.1;Parent=gene-CLI86_07020;Dbxref=NCBI_GP:PDP43707.1;Name=PDP43707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811845.1;locus_tag=CLI86_07020;product=methionine--tRNA ligase;protein_id=PDP43707.1;transl_table=11 NSLJ01000015.1 Genbank gene 21413 21607 . - . ID=gene-CLI86_07025;Name=CLI86_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07025 NSLJ01000015.1 Protein Homology CDS 21413 21607 . - 0 ID=cds-PDP43744.1;Parent=gene-CLI86_07025;Dbxref=NCBI_GP:PDP43744.1;Name=PDP43744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_07025;product=hypothetical protein;protein_id=PDP43744.1;transl_table=11 NSLJ01000015.1 Genbank gene 21672 23474 . - . ID=gene-CLI86_07030;Name=CLI86_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07030 NSLJ01000015.1 Protein Homology CDS 21672 23474 . - 0 ID=cds-PDP43708.1;Parent=gene-CLI86_07030;Dbxref=NCBI_GP:PDP43708.1;Name=PDP43708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224350.1;locus_tag=CLI86_07030;product=DEAD/DEAH box helicase;protein_id=PDP43708.1;transl_table=11 NSLJ01000015.1 Genbank gene 23654 24145 . - . ID=gene-CLI86_07035;Name=CLI86_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07035 NSLJ01000015.1 Protein Homology CDS 23654 24145 . - 0 ID=cds-PDP43709.1;Parent=gene-CLI86_07035;Dbxref=NCBI_GP:PDP43709.1;Name=PDP43709.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02481.13;locus_tag=CLI86_07035;product=hypothetical protein;protein_id=PDP43709.1;transl_table=11 NSLJ01000015.1 Genbank gene 24150 25181 . - . ID=gene-CLI86_07040;Name=CLI86_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07040 NSLJ01000015.1 Protein Homology CDS 24150 25181 . - 0 ID=cds-PDP43710.1;Parent=gene-CLI86_07040;Dbxref=NCBI_GP:PDP43710.1;Name=PDP43710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952169.1;locus_tag=CLI86_07040;product=cell filamentation protein Fic;protein_id=PDP43710.1;transl_table=11 NSLJ01000015.1 Genbank gene 25357 27117 . - . ID=gene-CLI86_07045;Name=CLI86_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07045 NSLJ01000015.1 Protein Homology CDS 25357 27117 . - 0 ID=cds-PDP43745.1;Parent=gene-CLI86_07045;Dbxref=NCBI_GP:PDP43745.1;Name=PDP43745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360960.1;locus_tag=CLI86_07045;product=ATP-dependent DNA helicase RecG;protein_id=PDP43745.1;transl_table=11 NSLJ01000015.1 Genbank gene 27451 30723 . - . ID=gene-CLI86_07050;Name=CLI86_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07050 NSLJ01000015.1 Protein Homology CDS 27451 30723 . - 0 ID=cds-PDP43711.1;Parent=gene-CLI86_07050;Dbxref=NCBI_GP:PDP43711.1;Name=PDP43711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952166.1;locus_tag=CLI86_07050;product=SAM-dependent methyltransferase;protein_id=PDP43711.1;transl_table=11 NSLJ01000015.1 Genbank gene 30735 34112 . - . ID=gene-CLI86_07055;Name=CLI86_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07055 NSLJ01000015.1 Protein Homology CDS 30735 34112 . - 0 ID=cds-PDP43746.1;Parent=gene-CLI86_07055;Dbxref=NCBI_GP:PDP43746.1;Name=PDP43746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360957.1;locus_tag=CLI86_07055;product=helicase;protein_id=PDP43746.1;transl_table=11 NSLJ01000015.1 Genbank gene 34281 34823 . - . ID=gene-CLI86_07060;Name=CLI86_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07060 NSLJ01000015.1 GeneMarkS+ CDS 34281 34823 . - 0 ID=cds-PDP43712.1;Parent=gene-CLI86_07060;Dbxref=NCBI_GP:PDP43712.1;Name=PDP43712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07060;product=hypothetical protein;protein_id=PDP43712.1;transl_table=11 NSLJ01000015.1 Genbank gene 34935 36626 . - . ID=gene-CLI86_07065;Name=CLI86_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07065 NSLJ01000015.1 Protein Homology CDS 34935 36626 . - 0 ID=cds-PDP43747.1;Parent=gene-CLI86_07065;Dbxref=NCBI_GP:PDP43747.1;Name=PDP43747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224357.1;locus_tag=CLI86_07065;product=hypothetical protein;protein_id=PDP43747.1;transl_table=11 NSLJ01000015.1 Genbank gene 36859 38091 . + . ID=gene-CLI86_07070;Name=CLI86_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07070 NSLJ01000015.1 Protein Homology CDS 36859 38091 . + 0 ID=cds-PDP43713.1;Parent=gene-CLI86_07070;Dbxref=NCBI_GP:PDP43713.1;Name=PDP43713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224358.1;locus_tag=CLI86_07070;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=PDP43713.1;transl_table=11 NSLJ01000015.1 Genbank gene 38123 38554 . + . ID=gene-CLI86_07075;Name=CLI86_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07075 NSLJ01000015.1 Protein Homology CDS 38123 38554 . + 0 ID=cds-PDP43748.1;Parent=gene-CLI86_07075;Dbxref=NCBI_GP:PDP43748.1;Name=PDP43748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005935479.1;locus_tag=CLI86_07075;product=phospholipase;protein_id=PDP43748.1;transl_table=11 NSLJ01000015.1 Genbank gene 38781 40373 . + . ID=gene-CLI86_07080;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CLI86_07080 NSLJ01000015.1 Protein Homology CDS 38781 40373 . + 0 ID=cds-PDP43714.1;Parent=gene-CLI86_07080;Dbxref=NCBI_GP:PDP43714.1;Name=PDP43714.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224360.1;locus_tag=CLI86_07080;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=PDP43714.1;transl_table=11 NSLJ01000015.1 Genbank gene 40498 41214 . - . ID=gene-CLI86_07085;Name=CLI86_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07085 NSLJ01000015.1 Protein Homology CDS 40498 41214 . - 0 ID=cds-PDP43715.1;Parent=gene-CLI86_07085;Dbxref=NCBI_GP:PDP43715.1;Name=PDP43715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224361.1;locus_tag=CLI86_07085;product=DNA alkylation repair protein;protein_id=PDP43715.1;transl_table=11 NSLJ01000015.1 Genbank gene 41211 42176 . - . ID=gene-CLI86_07090;Name=CLI86_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07090 NSLJ01000015.1 Protein Homology CDS 41211 42176 . - 0 ID=cds-PDP43749.1;Parent=gene-CLI86_07090;Dbxref=NCBI_GP:PDP43749.1;Name=PDP43749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005649732.1;locus_tag=CLI86_07090;product=dihydrofolate reductase;protein_id=PDP43749.1;transl_table=11 NSLJ01000015.1 Genbank gene 42274 43509 . + . ID=gene-CLI86_07095;Name=CLI86_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07095 NSLJ01000015.1 Protein Homology CDS 42274 43509 . + 0 ID=cds-PDP43716.1;Parent=gene-CLI86_07095;Dbxref=NCBI_GP:PDP43716.1;Name=PDP43716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224363.1;locus_tag=CLI86_07095;product=hypothetical protein;protein_id=PDP43716.1;transl_table=11 NSLJ01000015.1 Genbank gene 43506 43931 . + . ID=gene-CLI86_07100;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CLI86_07100 NSLJ01000015.1 Protein Homology CDS 43506 43931 . + 0 ID=cds-PDP43717.1;Parent=gene-CLI86_07100;Dbxref=NCBI_GP:PDP43717.1;Name=PDP43717.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224364.1;locus_tag=CLI86_07100;product=rRNA maturation RNase YbeY;protein_id=PDP43717.1;transl_table=11 NSLJ01000015.1 Genbank gene 43924 44700 . - . ID=gene-CLI86_07105;Name=CLI86_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07105 NSLJ01000015.1 GeneMarkS+ CDS 43924 44700 . - 0 ID=cds-PDP43718.1;Parent=gene-CLI86_07105;Dbxref=NCBI_GP:PDP43718.1;Name=PDP43718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07105;product=hypothetical protein;protein_id=PDP43718.1;transl_table=11 NSLJ01000015.1 Genbank gene 44979 47816 . + . ID=gene-CLI86_07110;Name=CLI86_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07110 NSLJ01000015.1 Protein Homology CDS 44979 47816 . + 0 ID=cds-PDP43750.1;Parent=gene-CLI86_07110;Dbxref=NCBI_GP:PDP43750.1;Name=PDP43750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639621.1;locus_tag=CLI86_07110;product=leucine--tRNA ligase;protein_id=PDP43750.1;transl_table=11 NSLJ01000015.1 Genbank gene 47813 48688 . + . ID=gene-CLI86_07115;Name=CLI86_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07115 NSLJ01000015.1 Protein Homology CDS 47813 48688 . + 0 ID=cds-PDP43719.1;Parent=gene-CLI86_07115;Dbxref=NCBI_GP:PDP43719.1;Name=PDP43719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224367.1;locus_tag=CLI86_07115;product=YitT family protein;protein_id=PDP43719.1;transl_table=11 NSLJ01000015.1 Genbank gene 48777 49355 . + . ID=gene-CLI86_07120;Name=CLI86_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07120 NSLJ01000015.1 Protein Homology CDS 48777 49355 . + 0 ID=cds-PDP43720.1;Parent=gene-CLI86_07120;Dbxref=NCBI_GP:PDP43720.1;Name=PDP43720.1;Note=hydrolyzes non-standard nucleotides such as xanthine and inosine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224368.1;locus_tag=CLI86_07120;product=non-canonical purine NTP diphosphatase;protein_id=PDP43720.1;transl_table=11 NSLJ01000015.1 Genbank gene 49428 51737 . + . ID=gene-CLI86_07125;Name=CLI86_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07125 NSLJ01000015.1 GeneMarkS+ CDS 49428 51737 . + 0 ID=cds-PDP43721.1;Parent=gene-CLI86_07125;Dbxref=NCBI_GP:PDP43721.1;Name=PDP43721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07125;product=T9SS C-terminal target domain-containing protein;protein_id=PDP43721.1;transl_table=11 NSLJ01000015.1 Genbank gene 51788 52777 . - . ID=gene-CLI86_07130;Name=CLI86_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07130 NSLJ01000015.1 Protein Homology CDS 51788 52777 . - 0 ID=cds-PDP43722.1;Parent=gene-CLI86_07130;Dbxref=NCBI_GP:PDP43722.1;Name=PDP43722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01209.16;locus_tag=CLI86_07130;product=class I SAM-dependent methyltransferase;protein_id=PDP43722.1;transl_table=11 NSLJ01000015.1 Genbank gene 53031 54848 . + . ID=gene-CLI86_07135;Name=CLI86_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07135 NSLJ01000015.1 Protein Homology CDS 53031 54848 . + 0 ID=cds-PDP43751.1;Parent=gene-CLI86_07135;Dbxref=NCBI_GP:PDP43751.1;Name=PDP43751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860830.1;locus_tag=CLI86_07135;product=long-chain fatty acid--CoA ligase;protein_id=PDP43751.1;transl_table=11 NSLJ01000015.1 Genbank gene 54937 55557 . + . ID=gene-CLI86_07140;Name=CLI86_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07140 NSLJ01000015.1 Protein Homology CDS 54937 55557 . + 0 ID=cds-PDP43723.1;Parent=gene-CLI86_07140;Dbxref=NCBI_GP:PDP43723.1;Name=PDP43723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224372.1;locus_tag=CLI86_07140;product=lysine transporter LysE;protein_id=PDP43723.1;transl_table=11 NSLJ01000015.1 Genbank gene 55771 56637 . - . ID=gene-CLI86_07145;Name=CLI86_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07145 NSLJ01000015.1 Protein Homology CDS 55771 56637 . - 0 ID=cds-PDP43724.1;Parent=gene-CLI86_07145;Dbxref=NCBI_GP:PDP43724.1;Name=PDP43724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224374.1;locus_tag=CLI86_07145;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=PDP43724.1;transl_table=11 NSLJ01000015.1 Genbank gene 56641 57330 . - . ID=gene-CLI86_07150;Name=CLI86_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07150 NSLJ01000015.1 Protein Homology CDS 56641 57330 . - 0 ID=cds-PDP43725.1;Parent=gene-CLI86_07150;Dbxref=NCBI_GP:PDP43725.1;Name=PDP43725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224375.1;locus_tag=CLI86_07150;product=(d)CMP kinase;protein_id=PDP43725.1;transl_table=11 NSLJ01000015.1 Genbank gene 57359 58372 . - . ID=gene-CLI86_07155;Name=CLI86_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07155 NSLJ01000015.1 Protein Homology CDS 57359 58372 . - 0 ID=cds-PDP43726.1;Parent=gene-CLI86_07155;Dbxref=NCBI_GP:PDP43726.1;Name=PDP43726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858911.1;locus_tag=CLI86_07155;product=DUF3308 domain-containing protein;protein_id=PDP43726.1;transl_table=11 NSLJ01000015.1 Genbank gene 58616 59314 . + . ID=gene-CLI86_07160;Name=CLI86_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07160 NSLJ01000015.1 Protein Homology CDS 58616 59314 . + 0 ID=cds-PDP43727.1;Parent=gene-CLI86_07160;Dbxref=NCBI_GP:PDP43727.1;Name=PDP43727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224377.1;locus_tag=CLI86_07160;product=energy transducer TonB;protein_id=PDP43727.1;transl_table=11 NSLJ01000015.1 Genbank gene 59405 60388 . + . ID=gene-CLI86_07165;Name=CLI86_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07165 NSLJ01000015.1 Protein Homology CDS 59405 60388 . + 0 ID=cds-PDP43728.1;Parent=gene-CLI86_07165;Dbxref=NCBI_GP:PDP43728.1;Name=PDP43728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224378.1;locus_tag=CLI86_07165;product=isoprenyl synthetase;protein_id=PDP43728.1;transl_table=11 NSLJ01000015.1 Genbank gene 60405 61205 . + . ID=gene-CLI86_07170;Name=CLI86_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07170 NSLJ01000015.1 Protein Homology CDS 60405 61205 . + 0 ID=cds-PDP43752.1;Parent=gene-CLI86_07170;Dbxref=NCBI_GP:PDP43752.1;Name=PDP43752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654885.1;locus_tag=CLI86_07170;product=hydrolase TatD;protein_id=PDP43752.1;transl_table=11 NSLJ01000015.1 Genbank gene 61338 61425 . + . ID=gene-CLI86_07175;Name=CLI86_07175;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_07175 NSLJ01000015.1 tRNAscan-SE tRNA 61338 61425 . + . ID=rna-CLI86_07175;Parent=gene-CLI86_07175;anticodon=(pos:61372..61374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_07175;product=tRNA-Ser NSLJ01000015.1 tRNAscan-SE exon 61338 61425 . + . ID=exon-CLI86_07175-1;Parent=rna-CLI86_07175;anticodon=(pos:61372..61374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_07175;product=tRNA-Ser NSLJ01000015.1 Genbank gene 61545 62288 . + . ID=gene-CLI86_07180;Name=CLI86_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07180 NSLJ01000015.1 Protein Homology CDS 61545 62288 . + 0 ID=cds-PDP43729.1;Parent=gene-CLI86_07180;Dbxref=NCBI_GP:PDP43729.1;Name=PDP43729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005648199.1;locus_tag=CLI86_07180;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP43729.1;transl_table=11 NSLJ01000015.1 Genbank gene 62298 62771 . + . ID=gene-CLI86_07185;Name=CLI86_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07185 NSLJ01000015.1 Protein Homology CDS 62298 62771 . + 0 ID=cds-PDP43730.1;Parent=gene-CLI86_07185;Dbxref=NCBI_GP:PDP43730.1;Name=PDP43730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867928.1;locus_tag=CLI86_07185;product=hypothetical protein;protein_id=PDP43730.1;transl_table=11 NSLJ01000015.1 Genbank gene 62792 63385 . + . ID=gene-CLI86_07190;Name=CLI86_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07190 NSLJ01000015.1 Protein Homology CDS 62792 63385 . + 0 ID=cds-PDP43731.1;Parent=gene-CLI86_07190;Dbxref=NCBI_GP:PDP43731.1;Name=PDP43731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858924.1;locus_tag=CLI86_07190;product=biopolymer transporter ExbD;protein_id=PDP43731.1;transl_table=11 NSLJ01000015.1 Genbank gene 63401 63868 . + . ID=gene-CLI86_07195;Name=CLI86_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07195 NSLJ01000015.1 Protein Homology CDS 63401 63868 . + 0 ID=cds-PDP43732.1;Parent=gene-CLI86_07195;Dbxref=NCBI_GP:PDP43732.1;Name=PDP43732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637276.1;locus_tag=CLI86_07195;product=biopolymer transporter ExbD;protein_id=PDP43732.1;transl_table=11 NSLJ01000015.1 Genbank gene 64049 64543 . + . ID=gene-CLI86_07200;Name=CLI86_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07200 NSLJ01000015.1 Protein Homology CDS 64049 64543 . + 0 ID=cds-PDP43753.1;Parent=gene-CLI86_07200;Dbxref=NCBI_GP:PDP43753.1;Name=PDP43753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009317986.1;locus_tag=CLI86_07200;product=transcriptional regulator;protein_id=PDP43753.1;transl_table=11 NSLJ01000015.1 Genbank gene 64787 65950 . - . ID=gene-CLI86_07205;Name=CLI86_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07205 NSLJ01000015.1 Protein Homology CDS 64787 65950 . - 0 ID=cds-PDP43733.1;Parent=gene-CLI86_07205;Dbxref=NCBI_GP:PDP43733.1;Name=PDP43733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224384.1;locus_tag=CLI86_07205;product=sodium ion-translocating decarboxylase subunit beta;protein_id=PDP43733.1;transl_table=11 NSLJ01000015.1 Genbank gene 65959 66390 . - . ID=gene-CLI86_07210;Name=CLI86_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07210 NSLJ01000015.1 Protein Homology CDS 65959 66390 . - 0 ID=cds-PDP43734.1;Parent=gene-CLI86_07210;Dbxref=NCBI_GP:PDP43734.1;Name=PDP43734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224385.1;locus_tag=CLI86_07210;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=PDP43734.1;transl_table=11 NSLJ01000015.1 Genbank gene 66437 67321 . - . ID=gene-CLI86_07215;Name=CLI86_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07215 NSLJ01000015.1 Protein Homology CDS 66437 67321 . - 0 ID=cds-PDP43735.1;Parent=gene-CLI86_07215;Dbxref=NCBI_GP:PDP43735.1;Name=PDP43735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224386.1;locus_tag=CLI86_07215;product=phage tail protein;protein_id=PDP43735.1;transl_table=11 NSLJ01000015.1 Genbank gene 67343 68896 . - . ID=gene-CLI86_07220;Name=CLI86_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07220 NSLJ01000015.1 Protein Homology CDS 67343 68896 . - 0 ID=cds-PDP43736.1;Parent=gene-CLI86_07220;Dbxref=NCBI_GP:PDP43736.1;Name=PDP43736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009128927.1;locus_tag=CLI86_07220;product=methylmalonyl-CoA carboxyltransferase;protein_id=PDP43736.1;transl_table=11 NSLJ01000015.1 Genbank gene 68933 69334 . - . ID=gene-CLI86_07225;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=CLI86_07225 NSLJ01000015.1 Protein Homology CDS 68933 69334 . - 0 ID=cds-PDP43737.1;Parent=gene-CLI86_07225;Dbxref=NCBI_GP:PDP43737.1;Name=PDP43737.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224388.1;locus_tag=CLI86_07225;product=methylmalonyl-CoA epimerase;protein_id=PDP43737.1;transl_table=11 NSLJ01000015.1 Genbank gene 69519 70229 . - . ID=gene-CLI86_07230;Name=CLI86_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07230 NSLJ01000015.1 Protein Homology CDS 69519 70229 . - 0 ID=cds-PDP43754.1;Parent=gene-CLI86_07230;Dbxref=NCBI_GP:PDP43754.1;Name=PDP43754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811155.1;locus_tag=CLI86_07230;product=UMP kinase;protein_id=PDP43754.1;transl_table=11 NSLJ01000015.1 Genbank gene 70506 71042 . + . ID=gene-CLI86_07235;Name=CLI86_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07235 NSLJ01000015.1 Protein Homology CDS 70506 71042 . + 0 ID=cds-PDP43738.1;Parent=gene-CLI86_07235;Dbxref=NCBI_GP:PDP43738.1;Name=PDP43738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224390.1;locus_tag=CLI86_07235;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP43738.1;transl_table=11 NSLJ01000015.1 Genbank gene 71143 72336 . + . ID=gene-CLI86_07240;Name=CLI86_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07240 NSLJ01000015.1 Protein Homology CDS 71143 72336 . + 0 ID=cds-PDP43739.1;Parent=gene-CLI86_07240;Dbxref=NCBI_GP:PDP43739.1;Name=PDP43739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224391.1;locus_tag=CLI86_07240;product=iron dicitrate transport regulator FecR;protein_id=PDP43739.1;transl_table=11 NSLJ01000015.1 Genbank gene 72469 75915 . + . ID=gene-CLI86_07245;Name=CLI86_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07245 NSLJ01000015.1 Protein Homology CDS 72469 75915 . + 0 ID=cds-PDP43740.1;Parent=gene-CLI86_07245;Dbxref=NCBI_GP:PDP43740.1;Name=PDP43740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224392.1;locus_tag=CLI86_07245;product=SusC/RagA family protein;protein_id=PDP43740.1;transl_table=11 NSLJ01000015.1 Genbank gene 75943 77832 . + . ID=gene-CLI86_07250;Name=CLI86_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07250 NSLJ01000015.1 Protein Homology CDS 75943 77832 . + 0 ID=cds-PDP43741.1;Parent=gene-CLI86_07250;Dbxref=NCBI_GP:PDP43741.1;Name=PDP43741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224393.1;locus_tag=CLI86_07250;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43741.1;transl_table=11 NSLJ01000015.1 Genbank gene 77855 78769 . + . ID=gene-CLI86_07255;Name=CLI86_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07255 NSLJ01000015.1 Protein Homology CDS 77855 78769 . + 0 ID=cds-PDP43742.1;Parent=gene-CLI86_07255;Dbxref=NCBI_GP:PDP43742.1;Name=PDP43742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224394.1;locus_tag=CLI86_07255;product=DUF4959 domain-containing protein;protein_id=PDP43742.1;transl_table=11 NSLJ01000015.1 Genbank gene 78878 79017 . - . ID=gene-CLI86_07260;Name=CLI86_07260;end_range=79017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07260;partial=true NSLJ01000015.1 Protein Homology CDS 78878 79017 . - 2 ID=cds-PDP43743.1;Parent=gene-CLI86_07260;Dbxref=NCBI_GP:PDP43743.1;Name=PDP43743.1;end_range=79017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224395.1;locus_tag=CLI86_07260;partial=true;product=mannose-6-phosphate isomerase;protein_id=PDP43743.1;transl_table=11 ##sequence-region NSLJ01000016.1 1 78292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000016.1 Genbank region 1 78292 . + . ID=NSLJ01000016.1:1..78292;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000016.1 Genbank pseudogene 229 1074 . - . ID=gene-CLI86_07265;Name=CLI86_07265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_07265;pseudo=true NSLJ01000016.1 Protein Homology CDS 229 1074 . - 0 ID=cds-CLI86_07265;Parent=gene-CLI86_07265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844267.1;locus_tag=CLI86_07265;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000016.1 Genbank gene 2154 2591 . + . ID=gene-CLI86_07270;Name=CLI86_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07270 NSLJ01000016.1 Protein Homology CDS 2154 2591 . + 0 ID=cds-PDP43671.1;Parent=gene-CLI86_07270;Dbxref=NCBI_GP:PDP43671.1;Name=PDP43671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010423459.1;locus_tag=CLI86_07270;product=DUF4440 domain-containing protein;protein_id=PDP43671.1;transl_table=11 NSLJ01000016.1 Genbank gene 2624 3685 . + . ID=gene-CLI86_07275;Name=CLI86_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07275 NSLJ01000016.1 Protein Homology CDS 2624 3685 . + 0 ID=cds-PDP43612.1;Parent=gene-CLI86_07275;Dbxref=NCBI_GP:PDP43612.1;Name=PDP43612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02627.18;locus_tag=CLI86_07275;product=hypothetical protein;protein_id=PDP43612.1;transl_table=11 NSLJ01000016.1 Genbank gene 3710 4795 . + . ID=gene-CLI86_07280;Name=CLI86_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07280 NSLJ01000016.1 Protein Homology CDS 3710 4795 . + 0 ID=cds-PDP43613.1;Parent=gene-CLI86_07280;Dbxref=NCBI_GP:PDP43613.1;Name=PDP43613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369645.1;locus_tag=CLI86_07280;product=alpha/beta hydrolase;protein_id=PDP43613.1;transl_table=11 NSLJ01000016.1 Genbank gene 4834 5847 . + . ID=gene-CLI86_07285;Name=CLI86_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07285 NSLJ01000016.1 Protein Homology CDS 4834 5847 . + 0 ID=cds-PDP43672.1;Parent=gene-CLI86_07285;Dbxref=NCBI_GP:PDP43672.1;Name=PDP43672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016323351.1;locus_tag=CLI86_07285;product=alpha/beta hydrolase;protein_id=PDP43672.1;transl_table=11 NSLJ01000016.1 Genbank gene 5850 6908 . + . ID=gene-CLI86_07290;Name=CLI86_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07290 NSLJ01000016.1 Protein Homology CDS 5850 6908 . + 0 ID=cds-PDP43614.1;Parent=gene-CLI86_07290;Dbxref=NCBI_GP:PDP43614.1;Name=PDP43614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016145560.1;locus_tag=CLI86_07290;product=alpha/beta hydrolase;protein_id=PDP43614.1;transl_table=11 NSLJ01000016.1 Genbank gene 6930 8066 . + . ID=gene-CLI86_07295;Name=CLI86_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07295 NSLJ01000016.1 Protein Homology CDS 6930 8066 . + 0 ID=cds-PDP43615.1;Parent=gene-CLI86_07295;Dbxref=NCBI_GP:PDP43615.1;Name=PDP43615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867987.1;locus_tag=CLI86_07295;product=aldo/keto reductase;protein_id=PDP43615.1;transl_table=11 NSLJ01000016.1 Genbank gene 8110 8676 . + . ID=gene-CLI86_07300;Name=CLI86_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07300 NSLJ01000016.1 Protein Homology CDS 8110 8676 . + 0 ID=cds-PDP43616.1;Parent=gene-CLI86_07300;Dbxref=NCBI_GP:PDP43616.1;Name=PDP43616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225529.1;locus_tag=CLI86_07300;product=flavodoxin;protein_id=PDP43616.1;transl_table=11 NSLJ01000016.1 Genbank gene 8698 10311 . + . ID=gene-CLI86_07305;Name=CLI86_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07305 NSLJ01000016.1 Protein Homology CDS 8698 10311 . + 0 ID=cds-PDP43617.1;Parent=gene-CLI86_07305;Dbxref=NCBI_GP:PDP43617.1;Name=PDP43617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019669968.1;locus_tag=CLI86_07305;product=carboxylesterase;protein_id=PDP43617.1;transl_table=11 NSLJ01000016.1 Genbank gene 10545 11444 . - . ID=gene-CLI86_07310;Name=CLI86_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07310 NSLJ01000016.1 Protein Homology CDS 10545 11444 . - 0 ID=cds-PDP43618.1;Parent=gene-CLI86_07310;Dbxref=NCBI_GP:PDP43618.1;Name=PDP43618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008157924.1;locus_tag=CLI86_07310;product=AraC family transcriptional regulator;protein_id=PDP43618.1;transl_table=11 NSLJ01000016.1 Genbank gene 11741 12592 . + . ID=gene-CLI86_07315;Name=CLI86_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07315 NSLJ01000016.1 Protein Homology CDS 11741 12592 . + 0 ID=cds-PDP43619.1;Parent=gene-CLI86_07315;Dbxref=NCBI_GP:PDP43619.1;Name=PDP43619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844384.1;locus_tag=CLI86_07315;product=hypothetical protein;protein_id=PDP43619.1;transl_table=11 NSLJ01000016.1 Genbank gene 12775 13134 . + . ID=gene-CLI86_07320;Name=CLI86_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07320 NSLJ01000016.1 Protein Homology CDS 12775 13134 . + 0 ID=cds-PDP43620.1;Parent=gene-CLI86_07320;Dbxref=NCBI_GP:PDP43620.1;Name=PDP43620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844383.1;locus_tag=CLI86_07320;product=DNA-binding protein;protein_id=PDP43620.1;transl_table=11 NSLJ01000016.1 Genbank gene 13097 15145 . + . ID=gene-CLI86_07325;Name=CLI86_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07325 NSLJ01000016.1 Protein Homology CDS 13097 15145 . + 0 ID=cds-PDP43621.1;Parent=gene-CLI86_07325;Dbxref=NCBI_GP:PDP43621.1;Name=PDP43621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844382.1;locus_tag=CLI86_07325;product=topoisomerase;protein_id=PDP43621.1;transl_table=11 NSLJ01000016.1 Genbank gene 15161 15472 . + . ID=gene-CLI86_07330;Name=CLI86_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07330 NSLJ01000016.1 Protein Homology CDS 15161 15472 . + 0 ID=cds-PDP43622.1;Parent=gene-CLI86_07330;Dbxref=NCBI_GP:PDP43622.1;Name=PDP43622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844381.1;locus_tag=CLI86_07330;product=DNA-binding protein;protein_id=PDP43622.1;transl_table=11 NSLJ01000016.1 Genbank gene 15910 17616 . + . ID=gene-CLI86_07335;Name=CLI86_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07335 NSLJ01000016.1 GeneMarkS+ CDS 15910 17616 . + 0 ID=cds-PDP43623.1;Parent=gene-CLI86_07335;Dbxref=NCBI_GP:PDP43623.1;Name=PDP43623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07335;product=hypothetical protein;protein_id=PDP43623.1;transl_table=11 NSLJ01000016.1 Genbank gene 17823 18875 . - . ID=gene-CLI86_07340;Name=CLI86_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07340 NSLJ01000016.1 Protein Homology CDS 17823 18875 . - 0 ID=cds-PDP43624.1;Parent=gene-CLI86_07340;Dbxref=NCBI_GP:PDP43624.1;Name=PDP43624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02661.16;locus_tag=CLI86_07340;product=Fic family protein;protein_id=PDP43624.1;transl_table=11 NSLJ01000016.1 Genbank gene 19098 19316 . - . ID=gene-CLI86_07345;Name=CLI86_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07345 NSLJ01000016.1 Protein Homology CDS 19098 19316 . - 0 ID=cds-PDP43625.1;Parent=gene-CLI86_07345;Dbxref=NCBI_GP:PDP43625.1;Name=PDP43625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362577.1;locus_tag=CLI86_07345;product=hypothetical protein;protein_id=PDP43625.1;transl_table=11 NSLJ01000016.1 Genbank gene 19321 19575 . - . ID=gene-CLI86_07350;Name=CLI86_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07350 NSLJ01000016.1 Protein Homology CDS 19321 19575 . - 0 ID=cds-PDP43626.1;Parent=gene-CLI86_07350;Dbxref=NCBI_GP:PDP43626.1;Name=PDP43626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1;locus_tag=CLI86_07350;product=hypothetical protein;protein_id=PDP43626.1;transl_table=11 NSLJ01000016.1 Genbank gene 19621 20613 . - . ID=gene-CLI86_07355;Name=CLI86_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07355 NSLJ01000016.1 Protein Homology CDS 19621 20613 . - 0 ID=cds-PDP43627.1;Parent=gene-CLI86_07355;Dbxref=NCBI_GP:PDP43627.1;Name=PDP43627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843954.1;locus_tag=CLI86_07355;product=fusion protein;protein_id=PDP43627.1;transl_table=11 NSLJ01000016.1 Genbank gene 20633 20932 . - . ID=gene-CLI86_07360;Name=CLI86_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07360 NSLJ01000016.1 GeneMarkS+ CDS 20633 20932 . - 0 ID=cds-PDP43628.1;Parent=gene-CLI86_07360;Dbxref=NCBI_GP:PDP43628.1;Name=PDP43628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07360;product=hypothetical protein;protein_id=PDP43628.1;transl_table=11 NSLJ01000016.1 Genbank gene 21324 21545 . + . ID=gene-CLI86_07365;Name=CLI86_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07365 NSLJ01000016.1 GeneMarkS+ CDS 21324 21545 . + 0 ID=cds-PDP43629.1;Parent=gene-CLI86_07365;Dbxref=NCBI_GP:PDP43629.1;Name=PDP43629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07365;product=hypothetical protein;protein_id=PDP43629.1;transl_table=11 NSLJ01000016.1 Genbank gene 21586 22113 . + . ID=gene-CLI86_07370;Name=CLI86_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07370 NSLJ01000016.1 Protein Homology CDS 21586 22113 . + 0 ID=cds-PDP43630.1;Parent=gene-CLI86_07370;Dbxref=NCBI_GP:PDP43630.1;Name=PDP43630.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01872.15;locus_tag=CLI86_07370;product=dihydrofolate reductase;protein_id=PDP43630.1;transl_table=11 NSLJ01000016.1 Genbank pseudogene 22181 22639 . - . ID=gene-CLI86_07375;Name=CLI86_07375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_07375;pseudo=true NSLJ01000016.1 Protein Homology CDS 22181 22639 . - 0 ID=cds-CLI86_07375;Parent=gene-CLI86_07375;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018074963.1;locus_tag=CLI86_07375;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000016.1 Genbank pseudogene 22726 23147 . - . ID=gene-CLI86_07380;Name=CLI86_07380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_07380;pseudo=true NSLJ01000016.1 Protein Homology CDS 22726 23147 . - 0 ID=cds-CLI86_07380;Parent=gene-CLI86_07380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843956.1;locus_tag=CLI86_07380;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000016.1 Genbank gene 23168 23686 . - . ID=gene-CLI86_07385;Name=CLI86_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07385 NSLJ01000016.1 Protein Homology CDS 23168 23686 . - 0 ID=cds-PDP43631.1;Parent=gene-CLI86_07385;Dbxref=NCBI_GP:PDP43631.1;Name=PDP43631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842769.1;locus_tag=CLI86_07385;product=DNA-binding protein;protein_id=PDP43631.1;transl_table=11 NSLJ01000016.1 Genbank gene 23699 24931 . - . ID=gene-CLI86_07390;Name=CLI86_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07390 NSLJ01000016.1 Protein Homology CDS 23699 24931 . - 0 ID=cds-PDP43632.1;Parent=gene-CLI86_07390;Dbxref=NCBI_GP:PDP43632.1;Name=PDP43632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842767.1;locus_tag=CLI86_07390;product=recombinase;protein_id=PDP43632.1;transl_table=11 NSLJ01000016.1 Genbank gene 25202 25288 . - . ID=gene-CLI86_07395;Name=CLI86_07395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_07395 NSLJ01000016.1 tRNAscan-SE tRNA 25202 25288 . - . ID=rna-CLI86_07395;Parent=gene-CLI86_07395;anticodon=(pos:complement(25252..25254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_07395;product=tRNA-Ser NSLJ01000016.1 tRNAscan-SE exon 25202 25288 . - . ID=exon-CLI86_07395-1;Parent=rna-CLI86_07395;anticodon=(pos:complement(25252..25254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_07395;product=tRNA-Ser NSLJ01000016.1 Genbank gene 25538 26662 . + . ID=gene-CLI86_07400;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CLI86_07400 NSLJ01000016.1 Protein Homology CDS 25538 26662 . + 0 ID=cds-PDP43633.1;Parent=gene-CLI86_07400;Dbxref=NCBI_GP:PDP43633.1;Name=PDP43633.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149437.1;locus_tag=CLI86_07400;product=DNA polymerase III subunit beta;protein_id=PDP43633.1;transl_table=11 NSLJ01000016.1 Genbank gene 26674 27438 . + . ID=gene-CLI86_07405;Name=CLI86_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07405 NSLJ01000016.1 Protein Homology CDS 26674 27438 . + 0 ID=cds-PDP43634.1;Parent=gene-CLI86_07405;Dbxref=NCBI_GP:PDP43634.1;Name=PDP43634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225676.1;locus_tag=CLI86_07405;product=3'-5' exonuclease;protein_id=PDP43634.1;transl_table=11 NSLJ01000016.1 Genbank gene 27488 28693 . + . ID=gene-CLI86_07410;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CLI86_07410 NSLJ01000016.1 Protein Homology CDS 27488 28693 . + 0 ID=cds-PDP43635.1;Parent=gene-CLI86_07410;Dbxref=NCBI_GP:PDP43635.1;Name=PDP43635.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225677.1;locus_tag=CLI86_07410;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=PDP43635.1;transl_table=11 NSLJ01000016.1 Genbank gene 28690 29595 . + . ID=gene-CLI86_07415;Name=CLI86_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07415 NSLJ01000016.1 Protein Homology CDS 28690 29595 . + 0 ID=cds-PDP43636.1;Parent=gene-CLI86_07415;Dbxref=NCBI_GP:PDP43636.1;Name=PDP43636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225678.1;locus_tag=CLI86_07415;product=DUF4835 domain-containing protein;protein_id=PDP43636.1;transl_table=11 NSLJ01000016.1 Genbank gene 29599 31263 . + . ID=gene-CLI86_07420;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CLI86_07420 NSLJ01000016.1 Protein Homology CDS 29599 31263 . + 0 ID=cds-PDP43637.1;Parent=gene-CLI86_07420;Dbxref=NCBI_GP:PDP43637.1;Name=PDP43637.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225679.1;locus_tag=CLI86_07420;product=DNA repair protein RecN;protein_id=PDP43637.1;transl_table=11 NSLJ01000016.1 Genbank gene 31289 32026 . + . ID=gene-CLI86_07425;Name=CLI86_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07425 NSLJ01000016.1 Protein Homology CDS 31289 32026 . + 0 ID=cds-PDP43673.1;Parent=gene-CLI86_07425;Dbxref=NCBI_GP:PDP43673.1;Name=PDP43673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009275067.1;locus_tag=CLI86_07425;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=PDP43673.1;transl_table=11 NSLJ01000016.1 Genbank gene 32242 32589 . - . ID=gene-CLI86_07430;Name=CLI86_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07430 NSLJ01000016.1 Protein Homology CDS 32242 32589 . - 0 ID=cds-PDP43638.1;Parent=gene-CLI86_07430;Dbxref=NCBI_GP:PDP43638.1;Name=PDP43638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225681.1;locus_tag=CLI86_07430;product=50S ribosomal protein L20;protein_id=PDP43638.1;transl_table=11 NSLJ01000016.1 Genbank gene 32686 32883 . - . ID=gene-CLI86_07435;Name=CLI86_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07435 NSLJ01000016.1 Protein Homology CDS 32686 32883 . - 0 ID=cds-PDP43639.1;Parent=gene-CLI86_07435;Dbxref=NCBI_GP:PDP43639.1;Name=PDP43639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225682.1;locus_tag=CLI86_07435;product=50S ribosomal protein L35;protein_id=PDP43639.1;transl_table=11 NSLJ01000016.1 Genbank gene 32948 33565 . - . ID=gene-CLI86_07440;Name=CLI86_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07440 NSLJ01000016.1 Protein Homology CDS 32948 33565 . - 0 ID=cds-PDP43640.1;Parent=gene-CLI86_07440;Dbxref=NCBI_GP:PDP43640.1;Name=PDP43640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225683.1;locus_tag=CLI86_07440;product=translation initiation factor IF-3;protein_id=PDP43640.1;transl_table=11 NSLJ01000016.1 Genbank gene 33612 35570 . - . ID=gene-CLI86_07445;Name=CLI86_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07445 NSLJ01000016.1 Protein Homology CDS 33612 35570 . - 0 ID=cds-PDP43641.1;Parent=gene-CLI86_07445;Dbxref=NCBI_GP:PDP43641.1;Name=PDP43641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225684.1;locus_tag=CLI86_07445;product=threonine--tRNA ligase;protein_id=PDP43641.1;transl_table=11 NSLJ01000016.1 Genbank gene 35998 37500 . - . ID=gene-CLI86_07450;Name=CLI86_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07450 NSLJ01000016.1 Protein Homology CDS 35998 37500 . - 0 ID=cds-PDP43642.1;Parent=gene-CLI86_07450;Dbxref=NCBI_GP:PDP43642.1;Name=PDP43642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005650999.1;locus_tag=CLI86_07450;product=hypothetical protein;protein_id=PDP43642.1;transl_table=11 NSLJ01000016.1 Genbank gene 37548 39005 . - . ID=gene-CLI86_07455;Name=CLI86_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07455 NSLJ01000016.1 Protein Homology CDS 37548 39005 . - 0 ID=cds-PDP43643.1;Parent=gene-CLI86_07455;Dbxref=NCBI_GP:PDP43643.1;Name=PDP43643.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154611.1;locus_tag=CLI86_07455;product=cytosol nonspecific dipeptidase;protein_id=PDP43643.1;transl_table=11 NSLJ01000016.1 Genbank gene 39149 39376 . + . ID=gene-CLI86_07460;Name=CLI86_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07460 NSLJ01000016.1 Protein Homology CDS 39149 39376 . + 0 ID=cds-PDP43644.1;Parent=gene-CLI86_07460;Dbxref=NCBI_GP:PDP43644.1;Name=PDP43644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635945.1;locus_tag=CLI86_07460;product=hypothetical protein;protein_id=PDP43644.1;transl_table=11 NSLJ01000016.1 Genbank gene 39391 40002 . + . ID=gene-CLI86_07465;Name=CLI86_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07465 NSLJ01000016.1 Protein Homology CDS 39391 40002 . + 0 ID=cds-PDP43645.1;Parent=gene-CLI86_07465;Dbxref=NCBI_GP:PDP43645.1;Name=PDP43645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225689.1;locus_tag=CLI86_07465;product=hypothetical protein;protein_id=PDP43645.1;transl_table=11 NSLJ01000016.1 Genbank gene 40034 41236 . - . ID=gene-CLI86_07470;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CLI86_07470 NSLJ01000016.1 Protein Homology CDS 40034 41236 . - 0 ID=cds-PDP43646.1;Parent=gene-CLI86_07470;Dbxref=NCBI_GP:PDP43646.1;Name=PDP43646.1;gbkey=CDS;gene=nagA;inference=COORDINATES: protein motif:HMM:TIGR00221;locus_tag=CLI86_07470;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=PDP43646.1;transl_table=11 NSLJ01000016.1 Genbank gene 41243 42427 . - . ID=gene-CLI86_07475;Name=CLI86_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07475 NSLJ01000016.1 Protein Homology CDS 41243 42427 . - 0 ID=cds-PDP43647.1;Parent=gene-CLI86_07475;Dbxref=NCBI_GP:PDP43647.1;Name=PDP43647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209902.1;locus_tag=CLI86_07475;product=NADH-dependent alcohol dehydrogenase;protein_id=PDP43647.1;transl_table=11 NSLJ01000016.1 Genbank gene 42586 43287 . - . ID=gene-CLI86_07480;Name=CLI86_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07480 NSLJ01000016.1 Protein Homology CDS 42586 43287 . - 0 ID=cds-PDP43674.1;Parent=gene-CLI86_07480;Dbxref=NCBI_GP:PDP43674.1;Name=PDP43674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007652918.1;locus_tag=CLI86_07480;product=Crp/Fnr family transcriptional regulator;protein_id=PDP43674.1;transl_table=11 NSLJ01000016.1 Genbank gene 43620 44501 . + . ID=gene-CLI86_07485;Name=CLI86_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07485 NSLJ01000016.1 Protein Homology CDS 43620 44501 . + 0 ID=cds-PDP43648.1;Parent=gene-CLI86_07485;Dbxref=NCBI_GP:PDP43648.1;Name=PDP43648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11276.6;locus_tag=CLI86_07485;product=DUF3078 domain-containing protein;protein_id=PDP43648.1;transl_table=11 NSLJ01000016.1 Genbank gene 44623 46629 . - . ID=gene-CLI86_07490;Name=CLI86_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07490 NSLJ01000016.1 Protein Homology CDS 44623 46629 . - 0 ID=cds-PDP43649.1;Parent=gene-CLI86_07490;Dbxref=NCBI_GP:PDP43649.1;Name=PDP43649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004295835.1;locus_tag=CLI86_07490;product=beta-galactosidase;protein_id=PDP43649.1;transl_table=11 NSLJ01000016.1 Genbank gene 46748 47536 . - . ID=gene-CLI86_07495;Name=CLI86_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07495 NSLJ01000016.1 Protein Homology CDS 46748 47536 . - 0 ID=cds-PDP43675.1;Parent=gene-CLI86_07495;Dbxref=NCBI_GP:PDP43675.1;Name=PDP43675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225697.1;locus_tag=CLI86_07495;product=beta-phosphoglucomutase;protein_id=PDP43675.1;transl_table=11 NSLJ01000016.1 Genbank gene 47570 48049 . - . ID=gene-CLI86_07500;Name=CLI86_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07500 NSLJ01000016.1 Protein Homology CDS 47570 48049 . - 0 ID=cds-PDP43650.1;Parent=gene-CLI86_07500;Dbxref=NCBI_GP:PDP43650.1;Name=PDP43650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225698.1;locus_tag=CLI86_07500;product=hypothetical protein;protein_id=PDP43650.1;transl_table=11 NSLJ01000016.1 Genbank gene 48113 49108 . - . ID=gene-CLI86_07505;Name=gldB;gbkey=Gene;gene=gldB;gene_biotype=protein_coding;locus_tag=CLI86_07505 NSLJ01000016.1 Protein Homology CDS 48113 49108 . - 0 ID=cds-PDP43676.1;Parent=gene-CLI86_07505;Dbxref=NCBI_GP:PDP43676.1;Name=PDP43676.1;gbkey=CDS;gene=gldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643842.1;locus_tag=CLI86_07505;product=gliding motility lipoprotein GldB;protein_id=PDP43676.1;transl_table=11 NSLJ01000016.1 Genbank gene 49121 50245 . - . ID=gene-CLI86_07510;Name=CLI86_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07510 NSLJ01000016.1 Protein Homology CDS 49121 50245 . - 0 ID=cds-PDP43651.1;Parent=gene-CLI86_07510;Dbxref=NCBI_GP:PDP43651.1;Name=PDP43651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225700.1;locus_tag=CLI86_07510;product=DNA polymerase III subunit delta;protein_id=PDP43651.1;transl_table=11 NSLJ01000016.1 Genbank gene 50248 51201 . - . ID=gene-CLI86_07515;Name=CLI86_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07515 NSLJ01000016.1 Protein Homology CDS 50248 51201 . - 0 ID=cds-PDP43677.1;Parent=gene-CLI86_07515;Dbxref=NCBI_GP:PDP43677.1;Name=PDP43677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225701.1;locus_tag=CLI86_07515;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=PDP43677.1;transl_table=11 NSLJ01000016.1 Genbank gene 51331 51537 . - . ID=gene-CLI86_07520;Name=CLI86_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07520 NSLJ01000016.1 GeneMarkS+ CDS 51331 51537 . - 0 ID=cds-PDP43652.1;Parent=gene-CLI86_07520;Dbxref=NCBI_GP:PDP43652.1;Name=PDP43652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07520;product=FeoB-associated Cys-rich membrane protein;protein_id=PDP43652.1;transl_table=11 NSLJ01000016.1 Genbank gene 51544 52902 . - . ID=gene-CLI86_07525;Name=CLI86_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07525 NSLJ01000016.1 Protein Homology CDS 51544 52902 . - 0 ID=cds-PDP43653.1;Parent=gene-CLI86_07525;Dbxref=NCBI_GP:PDP43653.1;Name=PDP43653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00797;locus_tag=CLI86_07525;product=MATE family efflux transporter;protein_id=PDP43653.1;transl_table=11 NSLJ01000016.1 Genbank gene 53437 56625 . + . ID=gene-CLI86_07530;Name=CLI86_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07530 NSLJ01000016.1 Protein Homology CDS 53437 56625 . + 0 ID=cds-PDP43654.1;Parent=gene-CLI86_07530;Dbxref=NCBI_GP:PDP43654.1;Name=PDP43654.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_07530;product=TonB-dependent receptor;protein_id=PDP43654.1;transl_table=11 NSLJ01000016.1 Genbank gene 56639 58648 . + . ID=gene-CLI86_07535;Name=CLI86_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07535 NSLJ01000016.1 Protein Homology CDS 56639 58648 . + 0 ID=cds-PDP43655.1;Parent=gene-CLI86_07535;Dbxref=NCBI_GP:PDP43655.1;Name=PDP43655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14322.4;locus_tag=CLI86_07535;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43655.1;transl_table=11 NSLJ01000016.1 Genbank gene 58659 59858 . - . ID=gene-CLI86_07540;Name=CLI86_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07540 NSLJ01000016.1 Protein Homology CDS 58659 59858 . - 0 ID=cds-PDP43656.1;Parent=gene-CLI86_07540;Dbxref=NCBI_GP:PDP43656.1;Name=PDP43656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225707.1;locus_tag=CLI86_07540;product=mannosyltransferase;protein_id=PDP43656.1;transl_table=11 NSLJ01000016.1 Genbank gene 59851 61089 . - . ID=gene-CLI86_07545;Name=CLI86_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07545 NSLJ01000016.1 Protein Homology CDS 59851 61089 . - 0 ID=cds-PDP43657.1;Parent=gene-CLI86_07545;Dbxref=NCBI_GP:PDP43657.1;Name=PDP43657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225708.1;locus_tag=CLI86_07545;product=hypothetical protein;protein_id=PDP43657.1;transl_table=11 NSLJ01000016.1 Genbank gene 61086 62183 . - . ID=gene-CLI86_07550;Name=CLI86_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07550 NSLJ01000016.1 Protein Homology CDS 61086 62183 . - 0 ID=cds-PDP43658.1;Parent=gene-CLI86_07550;Dbxref=NCBI_GP:PDP43658.1;Name=PDP43658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225709.1;locus_tag=CLI86_07550;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=PDP43658.1;transl_table=11 NSLJ01000016.1 Genbank gene 62204 63496 . - . ID=gene-CLI86_07555;Name=CLI86_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07555 NSLJ01000016.1 Protein Homology CDS 62204 63496 . - 0 ID=cds-PDP43678.1;Parent=gene-CLI86_07555;Dbxref=NCBI_GP:PDP43678.1;Name=PDP43678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225710.1;locus_tag=CLI86_07555;product=hypothetical protein;protein_id=PDP43678.1;transl_table=11 NSLJ01000016.1 Genbank gene 63493 64446 . - . ID=gene-CLI86_07560;Name=CLI86_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07560 NSLJ01000016.1 Protein Homology CDS 63493 64446 . - 0 ID=cds-PDP43659.1;Parent=gene-CLI86_07560;Dbxref=NCBI_GP:PDP43659.1;Name=PDP43659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225711.1;locus_tag=CLI86_07560;product=GNAT family N-acetyltransferase;protein_id=PDP43659.1;transl_table=11 NSLJ01000016.1 Genbank gene 64448 65464 . - . ID=gene-CLI86_07565;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CLI86_07565 NSLJ01000016.1 Protein Homology CDS 64448 65464 . - 0 ID=cds-PDP43660.1;Parent=gene-CLI86_07565;Dbxref=NCBI_GP:PDP43660.1;Name=PDP43660.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225712.1;locus_tag=CLI86_07565;product=recombinase RecA;protein_id=PDP43660.1;transl_table=11 NSLJ01000016.1 Genbank gene 65498 65953 . - . ID=gene-CLI86_07570;Name=CLI86_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07570 NSLJ01000016.1 Protein Homology CDS 65498 65953 . - 0 ID=cds-PDP43661.1;Parent=gene-CLI86_07570;Dbxref=NCBI_GP:PDP43661.1;Name=PDP43661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225713.1;locus_tag=CLI86_07570;product=thioredoxin-dependent thiol peroxidase;protein_id=PDP43661.1;transl_table=11 NSLJ01000016.1 Genbank gene 66025 67218 . - . ID=gene-CLI86_07575;Name=CLI86_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07575 NSLJ01000016.1 Protein Homology CDS 66025 67218 . - 0 ID=cds-PDP43662.1;Parent=gene-CLI86_07575;Dbxref=NCBI_GP:PDP43662.1;Name=PDP43662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225714.1;locus_tag=CLI86_07575;product=saccharopine dehydrogenase;protein_id=PDP43662.1;transl_table=11 NSLJ01000016.1 Genbank gene 67346 68038 . + . ID=gene-CLI86_07580;Name=CLI86_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07580 NSLJ01000016.1 Protein Homology CDS 67346 68038 . + 0 ID=cds-PDP43663.1;Parent=gene-CLI86_07580;Dbxref=NCBI_GP:PDP43663.1;Name=PDP43663.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03548.13;locus_tag=CLI86_07580;product=hypothetical protein;protein_id=PDP43663.1;transl_table=11 NSLJ01000016.1 Genbank gene 68016 68585 . + . ID=gene-CLI86_07585;Name=CLI86_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07585 NSLJ01000016.1 GeneMarkS+ CDS 68016 68585 . + 0 ID=cds-PDP43664.1;Parent=gene-CLI86_07585;Dbxref=NCBI_GP:PDP43664.1;Name=PDP43664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07585;product=hypothetical protein;protein_id=PDP43664.1;transl_table=11 NSLJ01000016.1 Genbank gene 68575 68946 . + . ID=gene-CLI86_07590;Name=CLI86_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07590 NSLJ01000016.1 Protein Homology CDS 68575 68946 . + 0 ID=cds-PDP43665.1;Parent=gene-CLI86_07590;Dbxref=NCBI_GP:PDP43665.1;Name=PDP43665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009230614.1;locus_tag=CLI86_07590;product=hypothetical protein;protein_id=PDP43665.1;transl_table=11 NSLJ01000016.1 Genbank gene 68943 69725 . + . ID=gene-CLI86_07595;Name=CLI86_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07595 NSLJ01000016.1 Protein Homology CDS 68943 69725 . + 0 ID=cds-PDP43666.1;Parent=gene-CLI86_07595;Dbxref=NCBI_GP:PDP43666.1;Name=PDP43666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225718.1;locus_tag=CLI86_07595;product=glycosyltransferase;protein_id=PDP43666.1;transl_table=11 NSLJ01000016.1 Genbank gene 69722 73219 . + . ID=gene-CLI86_07600;Name=CLI86_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07600 NSLJ01000016.1 Protein Homology CDS 69722 73219 . + 0 ID=cds-PDP43667.1;Parent=gene-CLI86_07600;Dbxref=NCBI_GP:PDP43667.1;Name=PDP43667.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01553.19%2CHMM:PF03176.13;locus_tag=CLI86_07600;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=PDP43667.1;transl_table=11 NSLJ01000016.1 Genbank pseudogene 73345 73572 . - . ID=gene-CLI86_07605;Name=CLI86_07605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_07605;pseudo=true NSLJ01000016.1 Protein Homology CDS 73345 73572 . - 0 ID=cds-CLI86_07605;Parent=gene-CLI86_07605;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226275.1;locus_tag=CLI86_07605;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000016.1 Genbank gene 73492 75018 . + . ID=gene-CLI86_07610;Name=CLI86_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07610 NSLJ01000016.1 Protein Homology CDS 73492 75018 . + 0 ID=cds-PDP43668.1;Parent=gene-CLI86_07610;Dbxref=NCBI_GP:PDP43668.1;Name=PDP43668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14107.4;locus_tag=CLI86_07610;product=hypothetical protein;protein_id=PDP43668.1;transl_table=11 NSLJ01000016.1 Genbank gene 75030 75914 . + . ID=gene-CLI86_07615;Name=CLI86_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07615 NSLJ01000016.1 Protein Homology CDS 75030 75914 . + 0 ID=cds-PDP43679.1;Parent=gene-CLI86_07615;Dbxref=NCBI_GP:PDP43679.1;Name=PDP43679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013996614.1;locus_tag=CLI86_07615;product=hypothetical protein;protein_id=PDP43679.1;transl_table=11 NSLJ01000016.1 Genbank gene 76206 77633 . + . ID=gene-CLI86_07620;Name=CLI86_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07620 NSLJ01000016.1 Protein Homology CDS 76206 77633 . + 0 ID=cds-PDP43669.1;Parent=gene-CLI86_07620;Dbxref=NCBI_GP:PDP43669.1;Name=PDP43669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14021.4%2CHMM:PF14107.4;locus_tag=CLI86_07620;product=hypothetical protein;protein_id=PDP43669.1;transl_table=11 NSLJ01000016.1 Genbank gene 77630 77977 . + . ID=gene-CLI86_07625;Name=CLI86_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07625 NSLJ01000016.1 Protein Homology CDS 77630 77977 . + 0 ID=cds-PDP43670.1;Parent=gene-CLI86_07625;Dbxref=NCBI_GP:PDP43670.1;Name=PDP43670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225722.1;locus_tag=CLI86_07625;product=hypothetical protein;protein_id=PDP43670.1;transl_table=11 ##sequence-region NSLJ01000017.1 1 76261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000017.1 Genbank region 1 76261 . + . ID=NSLJ01000017.1:1..76261;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000017.1 Genbank gene 52 1575 . - . ID=gene-CLI86_07630;Name=CLI86_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07630 NSLJ01000017.1 Protein Homology CDS 52 1575 . - 0 ID=cds-PDP43604.1;Parent=gene-CLI86_07630;Dbxref=NCBI_GP:PDP43604.1;Name=PDP43604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226423.1;locus_tag=CLI86_07630;product=hypothetical protein;protein_id=PDP43604.1;transl_table=11 NSLJ01000017.1 Genbank gene 1693 2049 . + . ID=gene-CLI86_07635;Name=CLI86_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07635 NSLJ01000017.1 Protein Homology CDS 1693 2049 . + 0 ID=cds-PDP43550.1;Parent=gene-CLI86_07635;Dbxref=NCBI_GP:PDP43550.1;Name=PDP43550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654157.1;locus_tag=CLI86_07635;product=30S ribosomal protein S6;protein_id=PDP43550.1;transl_table=11 NSLJ01000017.1 Genbank gene 2052 2336 . + . ID=gene-CLI86_07640;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CLI86_07640 NSLJ01000017.1 Protein Homology CDS 2052 2336 . + 0 ID=cds-PDP43551.1;Parent=gene-CLI86_07640;Dbxref=NCBI_GP:PDP43551.1;Name=PDP43551.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226425.1;locus_tag=CLI86_07640;product=30S ribosomal protein S18;protein_id=PDP43551.1;transl_table=11 NSLJ01000017.1 Genbank gene 2357 2803 . + . ID=gene-CLI86_07645;Name=CLI86_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07645 NSLJ01000017.1 Protein Homology CDS 2357 2803 . + 0 ID=cds-PDP43552.1;Parent=gene-CLI86_07645;Dbxref=NCBI_GP:PDP43552.1;Name=PDP43552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226426.1;locus_tag=CLI86_07645;product=50S ribosomal protein L9;protein_id=PDP43552.1;transl_table=11 NSLJ01000017.1 Genbank gene 2909 4051 . + . ID=gene-CLI86_07650;Name=CLI86_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07650 NSLJ01000017.1 Protein Homology CDS 2909 4051 . + 0 ID=cds-PDP43553.1;Parent=gene-CLI86_07650;Dbxref=NCBI_GP:PDP43553.1;Name=PDP43553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855080.1;locus_tag=CLI86_07650;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP43553.1;transl_table=11 NSLJ01000017.1 Genbank gene 4073 4957 . + . ID=gene-CLI86_07655;Name=CLI86_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07655 NSLJ01000017.1 Protein Homology CDS 4073 4957 . + 0 ID=cds-PDP43554.1;Parent=gene-CLI86_07655;Dbxref=NCBI_GP:PDP43554.1;Name=PDP43554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637091.1;locus_tag=CLI86_07655;product=MCE family protein;protein_id=PDP43554.1;transl_table=11 NSLJ01000017.1 Genbank gene 5079 5318 . + . ID=gene-CLI86_07660;Name=CLI86_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07660 NSLJ01000017.1 GeneMarkS+ CDS 5079 5318 . + 0 ID=cds-PDP43555.1;Parent=gene-CLI86_07660;Dbxref=NCBI_GP:PDP43555.1;Name=PDP43555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07660;product=hypothetical protein;protein_id=PDP43555.1;transl_table=11 NSLJ01000017.1 Genbank gene 5321 6724 . + . ID=gene-CLI86_07665;Name=CLI86_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07665 NSLJ01000017.1 Protein Homology CDS 5321 6724 . + 0 ID=cds-PDP43556.1;Parent=gene-CLI86_07665;Dbxref=NCBI_GP:PDP43556.1;Name=PDP43556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800474.1;locus_tag=CLI86_07665;product=chromosomal replication initiator protein DnaA;protein_id=PDP43556.1;transl_table=11 NSLJ01000017.1 Genbank gene 6736 9129 . - . ID=gene-CLI86_07670;Name=CLI86_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07670 NSLJ01000017.1 Protein Homology CDS 6736 9129 . - 0 ID=cds-PDP43557.1;Parent=gene-CLI86_07670;Dbxref=NCBI_GP:PDP43557.1;Name=PDP43557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02687.19%2CHMM:PF12704.5;locus_tag=CLI86_07670;product=hypothetical protein;protein_id=PDP43557.1;transl_table=11 NSLJ01000017.1 Genbank gene 9487 9843 . - . ID=gene-CLI86_07675;Name=CLI86_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07675 NSLJ01000017.1 Protein Homology CDS 9487 9843 . - 0 ID=cds-PDP43558.1;Parent=gene-CLI86_07675;Dbxref=NCBI_GP:PDP43558.1;Name=PDP43558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223492.1;locus_tag=CLI86_07675;product=50S ribosomal protein L19;protein_id=PDP43558.1;transl_table=11 NSLJ01000017.1 Genbank gene 10101 13103 . + . ID=gene-CLI86_07680;Name=CLI86_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07680 NSLJ01000017.1 Protein Homology CDS 10101 13103 . + 0 ID=cds-PDP43559.1;Parent=gene-CLI86_07680;Dbxref=NCBI_GP:PDP43559.1;Name=PDP43559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223493.1;locus_tag=CLI86_07680;product=glycoside hydrolase;protein_id=PDP43559.1;transl_table=11 NSLJ01000017.1 Genbank gene 13179 13358 . - . ID=gene-CLI86_07685;Name=CLI86_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07685 NSLJ01000017.1 Protein Homology CDS 13179 13358 . - 0 ID=cds-PDP43560.1;Parent=gene-CLI86_07685;Dbxref=NCBI_GP:PDP43560.1;Name=PDP43560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223494.1;locus_tag=CLI86_07685;product=hypothetical protein;protein_id=PDP43560.1;transl_table=11 NSLJ01000017.1 Genbank gene 13502 14239 . + . ID=gene-CLI86_07690;Name=CLI86_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07690 NSLJ01000017.1 Protein Homology CDS 13502 14239 . + 0 ID=cds-PDP43561.1;Parent=gene-CLI86_07690;Dbxref=NCBI_GP:PDP43561.1;Name=PDP43561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773729.1;locus_tag=CLI86_07690;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=PDP43561.1;transl_table=11 NSLJ01000017.1 Genbank gene 14260 15753 . - . ID=gene-CLI86_07695;Name=CLI86_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07695 NSLJ01000017.1 Protein Homology CDS 14260 15753 . - 0 ID=cds-PDP43562.1;Parent=gene-CLI86_07695;Dbxref=NCBI_GP:PDP43562.1;Name=PDP43562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01593.22;locus_tag=CLI86_07695;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=PDP43562.1;transl_table=11 NSLJ01000017.1 Genbank gene 15767 16993 . - . ID=gene-CLI86_07700;Name=CLI86_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07700 NSLJ01000017.1 Protein Homology CDS 15767 16993 . - 0 ID=cds-PDP43563.1;Parent=gene-CLI86_07700;Dbxref=NCBI_GP:PDP43563.1;Name=PDP43563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223497.1;locus_tag=CLI86_07700;product=beta-ketoacyl synthase;protein_id=PDP43563.1;transl_table=11 NSLJ01000017.1 Genbank gene 17098 18813 . - . ID=gene-CLI86_07705;Name=CLI86_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07705 NSLJ01000017.1 Protein Homology CDS 17098 18813 . - 0 ID=cds-PDP43564.1;Parent=gene-CLI86_07705;Dbxref=NCBI_GP:PDP43564.1;Name=PDP43564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223498.1;locus_tag=CLI86_07705;product=acetylhydrolase;protein_id=PDP43564.1;transl_table=11 NSLJ01000017.1 Genbank gene 18834 20303 . - . ID=gene-CLI86_07710;Name=CLI86_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07710 NSLJ01000017.1 GeneMarkS+ CDS 18834 20303 . - 0 ID=cds-PDP43565.1;Parent=gene-CLI86_07710;Dbxref=NCBI_GP:PDP43565.1;Name=PDP43565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07710;product=hypothetical protein;protein_id=PDP43565.1;transl_table=11 NSLJ01000017.1 Genbank gene 20310 22343 . - . ID=gene-CLI86_07715;Name=CLI86_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07715 NSLJ01000017.1 Protein Homology CDS 20310 22343 . - 0 ID=cds-PDP43566.1;Parent=gene-CLI86_07715;Dbxref=NCBI_GP:PDP43566.1;Name=PDP43566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223500.1;locus_tag=CLI86_07715;product=peptidase M13;protein_id=PDP43566.1;transl_table=11 NSLJ01000017.1 Genbank gene 22340 22600 . - . ID=gene-CLI86_07720;Name=CLI86_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07720 NSLJ01000017.1 GeneMarkS+ CDS 22340 22600 . - 0 ID=cds-PDP43567.1;Parent=gene-CLI86_07720;Dbxref=NCBI_GP:PDP43567.1;Name=PDP43567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07720;product=hypothetical protein;protein_id=PDP43567.1;transl_table=11 NSLJ01000017.1 Genbank gene 22601 23236 . - . ID=gene-CLI86_07725;Name=CLI86_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07725 NSLJ01000017.1 Protein Homology CDS 22601 23236 . - 0 ID=cds-PDP43568.1;Parent=gene-CLI86_07725;Dbxref=NCBI_GP:PDP43568.1;Name=PDP43568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155389.1;locus_tag=CLI86_07725;product=hypothetical protein;protein_id=PDP43568.1;transl_table=11 NSLJ01000017.1 cmsearch riboswitch 23323 23518 . + . ID=id-NSLJ01000017.1:23323..23518;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000017.1 Genbank gene 23529 24704 . + . ID=gene-CLI86_07730;Name=CLI86_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07730 NSLJ01000017.1 Protein Homology CDS 23529 24704 . + 0 ID=cds-PDP43605.1;Parent=gene-CLI86_07730;Dbxref=NCBI_GP:PDP43605.1;Name=PDP43605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223502.1;locus_tag=CLI86_07730;product=iron ABC transporter substrate-binding protein;protein_id=PDP43605.1;transl_table=11 NSLJ01000017.1 Genbank gene 24701 25738 . + . ID=gene-CLI86_07735;Name=CLI86_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07735 NSLJ01000017.1 Protein Homology CDS 24701 25738 . + 0 ID=cds-PDP43569.1;Parent=gene-CLI86_07735;Dbxref=NCBI_GP:PDP43569.1;Name=PDP43569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099474.1;locus_tag=CLI86_07735;product=iron ABC transporter;protein_id=PDP43569.1;transl_table=11 NSLJ01000017.1 Genbank gene 25735 26748 . + . ID=gene-CLI86_07740;Name=CLI86_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07740 NSLJ01000017.1 Protein Homology CDS 25735 26748 . + 0 ID=cds-PDP43570.1;Parent=gene-CLI86_07740;Dbxref=NCBI_GP:PDP43570.1;Name=PDP43570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223504.1;locus_tag=CLI86_07740;product=ABC transporter ATP-binding protein;protein_id=PDP43570.1;transl_table=11 NSLJ01000017.1 Genbank gene 26829 28085 . - . ID=gene-CLI86_07745;Name=CLI86_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07745 NSLJ01000017.1 Protein Homology CDS 26829 28085 . - 0 ID=cds-PDP43606.1;Parent=gene-CLI86_07745;Dbxref=NCBI_GP:PDP43606.1;Name=PDP43606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223505.1;locus_tag=CLI86_07745;product=hypothetical protein;protein_id=PDP43606.1;transl_table=11 NSLJ01000017.1 Genbank gene 28149 28766 . + . ID=gene-CLI86_07750;Name=CLI86_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07750 NSLJ01000017.1 Protein Homology CDS 28149 28766 . + 0 ID=cds-PDP43571.1;Parent=gene-CLI86_07750;Dbxref=NCBI_GP:PDP43571.1;Name=PDP43571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09851.7;locus_tag=CLI86_07750;product=hypothetical protein;protein_id=PDP43571.1;transl_table=11 NSLJ01000017.1 Genbank gene 28803 29582 . + . ID=gene-CLI86_07755;Name=CLI86_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07755 NSLJ01000017.1 Protein Homology CDS 28803 29582 . + 0 ID=cds-PDP43572.1;Parent=gene-CLI86_07755;Dbxref=NCBI_GP:PDP43572.1;Name=PDP43572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099682.1;locus_tag=CLI86_07755;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=PDP43572.1;transl_table=11 NSLJ01000017.1 Genbank gene 29570 30484 . + . ID=gene-CLI86_07760;Name=CLI86_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07760 NSLJ01000017.1 Protein Homology CDS 29570 30484 . + 0 ID=cds-PDP43573.1;Parent=gene-CLI86_07760;Dbxref=NCBI_GP:PDP43573.1;Name=PDP43573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223508.1;locus_tag=CLI86_07760;product=dihydroorotate dehydrogenase B catalytic subunit;protein_id=PDP43573.1;transl_table=11 NSLJ01000017.1 Genbank gene 30498 32759 . + . ID=gene-CLI86_07765;Name=CLI86_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07765 NSLJ01000017.1 GeneMarkS+ CDS 30498 32759 . + 0 ID=cds-PDP43574.1;Parent=gene-CLI86_07765;Dbxref=NCBI_GP:PDP43574.1;Name=PDP43574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07765;product=hypothetical protein;protein_id=PDP43574.1;transl_table=11 NSLJ01000017.1 Genbank gene 32823 34097 . + . ID=gene-CLI86_07770;Name=CLI86_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07770 NSLJ01000017.1 Protein Homology CDS 32823 34097 . + 0 ID=cds-PDP43575.1;Parent=gene-CLI86_07770;Dbxref=NCBI_GP:PDP43575.1;Name=PDP43575.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12697.5;locus_tag=CLI86_07770;product=hypothetical protein;protein_id=PDP43575.1;transl_table=11 NSLJ01000017.1 Genbank gene 34102 34803 . + . ID=gene-CLI86_07775;Name=CLI86_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07775 NSLJ01000017.1 Protein Homology CDS 34102 34803 . + 0 ID=cds-PDP43576.1;Parent=gene-CLI86_07775;Dbxref=NCBI_GP:PDP43576.1;Name=PDP43576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223511.1;locus_tag=CLI86_07775;product=methyltransferase;protein_id=PDP43576.1;transl_table=11 NSLJ01000017.1 Genbank gene 35207 35710 . + . ID=gene-CLI86_07780;Name=CLI86_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07780 NSLJ01000017.1 Protein Homology CDS 35207 35710 . + 0 ID=cds-PDP43577.1;Parent=gene-CLI86_07780;Dbxref=NCBI_GP:PDP43577.1;Name=PDP43577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223512.1;locus_tag=CLI86_07780;product=hypothetical protein;protein_id=PDP43577.1;transl_table=11 NSLJ01000017.1 Genbank gene 36025 36783 . + . ID=gene-CLI86_07785;Name=CLI86_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07785 NSLJ01000017.1 Protein Homology CDS 36025 36783 . + 0 ID=cds-PDP43578.1;Parent=gene-CLI86_07785;Dbxref=NCBI_GP:PDP43578.1;Name=PDP43578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854725.1;locus_tag=CLI86_07785;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=PDP43578.1;transl_table=11 NSLJ01000017.1 Genbank gene 36786 37682 . + . ID=gene-CLI86_07790;Name=CLI86_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07790 NSLJ01000017.1 Protein Homology CDS 36786 37682 . + 0 ID=cds-PDP43579.1;Parent=gene-CLI86_07790;Dbxref=NCBI_GP:PDP43579.1;Name=PDP43579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010802388.1;locus_tag=CLI86_07790;product=EamA family transporter;protein_id=PDP43579.1;transl_table=11 NSLJ01000017.1 Genbank gene 37679 39001 . - . ID=gene-CLI86_07795;Name=CLI86_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07795 NSLJ01000017.1 Protein Homology CDS 37679 39001 . - 0 ID=cds-PDP43580.1;Parent=gene-CLI86_07795;Dbxref=NCBI_GP:PDP43580.1;Name=PDP43580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223515.1;locus_tag=CLI86_07795;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=PDP43580.1;transl_table=11 NSLJ01000017.1 Genbank gene 39529 42012 . - . ID=gene-CLI86_07800;Name=CLI86_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07800 NSLJ01000017.1 Protein Homology CDS 39529 42012 . - 0 ID=cds-PDP43581.1;Parent=gene-CLI86_07800;Dbxref=NCBI_GP:PDP43581.1;Name=PDP43581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008862452.1;locus_tag=CLI86_07800;product=cellulase;protein_id=PDP43581.1;transl_table=11 NSLJ01000017.1 Genbank gene 42083 43885 . - . ID=gene-CLI86_07805;Name=CLI86_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07805 NSLJ01000017.1 Protein Homology CDS 42083 43885 . - 0 ID=cds-PDP43582.1;Parent=gene-CLI86_07805;Dbxref=NCBI_GP:PDP43582.1;Name=PDP43582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223517.1;locus_tag=CLI86_07805;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP43582.1;transl_table=11 NSLJ01000017.1 Genbank gene 43916 47107 . - . ID=gene-CLI86_07810;Name=CLI86_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07810 NSLJ01000017.1 Protein Homology CDS 43916 47107 . - 0 ID=cds-PDP43583.1;Parent=gene-CLI86_07810;Dbxref=NCBI_GP:PDP43583.1;Name=PDP43583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016661350.1;locus_tag=CLI86_07810;product=SusC/RagA family protein;protein_id=PDP43583.1;transl_table=11 NSLJ01000017.1 Genbank gene 47191 48045 . - . ID=gene-CLI86_07815;Name=CLI86_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07815 NSLJ01000017.1 Protein Homology CDS 47191 48045 . - 0 ID=cds-PDP43584.1;Parent=gene-CLI86_07815;Dbxref=NCBI_GP:PDP43584.1;Name=PDP43584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223519.1;locus_tag=CLI86_07815;product=hypothetical protein;protein_id=PDP43584.1;transl_table=11 NSLJ01000017.1 Genbank gene 48072 49952 . - . ID=gene-CLI86_07820;Name=CLI86_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07820 NSLJ01000017.1 Protein Homology CDS 48072 49952 . - 0 ID=cds-PDP43585.1;Parent=gene-CLI86_07820;Dbxref=NCBI_GP:PDP43585.1;Name=PDP43585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223520.1;locus_tag=CLI86_07820;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP43585.1;transl_table=11 NSLJ01000017.1 Genbank gene 49972 53070 . - . ID=gene-CLI86_07825;Name=CLI86_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07825 NSLJ01000017.1 Protein Homology CDS 49972 53070 . - 0 ID=cds-PDP43586.1;Parent=gene-CLI86_07825;Dbxref=NCBI_GP:PDP43586.1;Name=PDP43586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223521.1;locus_tag=CLI86_07825;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43586.1;transl_table=11 NSLJ01000017.1 Genbank gene 53407 54261 . - . ID=gene-CLI86_07830;Name=CLI86_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07830 NSLJ01000017.1 Protein Homology CDS 53407 54261 . - 0 ID=cds-PDP43587.1;Parent=gene-CLI86_07830;Dbxref=NCBI_GP:PDP43587.1;Name=PDP43587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016661132.1;locus_tag=CLI86_07830;product=hypothetical protein;protein_id=PDP43587.1;transl_table=11 NSLJ01000017.1 Genbank gene 54699 57791 . + . ID=gene-CLI86_07835;Name=CLI86_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07835 NSLJ01000017.1 Protein Homology CDS 54699 57791 . + 0 ID=cds-PDP43588.1;Parent=gene-CLI86_07835;Dbxref=NCBI_GP:PDP43588.1;Name=PDP43588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223523.1;locus_tag=CLI86_07835;product=xanthan lyase;protein_id=PDP43588.1;transl_table=11 NSLJ01000017.1 Genbank gene 57815 59281 . + . ID=gene-CLI86_07840;Name=CLI86_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07840 NSLJ01000017.1 Protein Homology CDS 57815 59281 . + 0 ID=cds-PDP43589.1;Parent=gene-CLI86_07840;Dbxref=NCBI_GP:PDP43589.1;Name=PDP43589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223524.1;locus_tag=CLI86_07840;product=glycosyl transferase;protein_id=PDP43589.1;transl_table=11 NSLJ01000017.1 Genbank gene 59281 60213 . + . ID=gene-CLI86_07845;Name=CLI86_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07845 NSLJ01000017.1 Protein Homology CDS 59281 60213 . + 0 ID=cds-PDP43607.1;Parent=gene-CLI86_07845;Dbxref=NCBI_GP:PDP43607.1;Name=PDP43607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007660610.1;locus_tag=CLI86_07845;product=DUF4922 domain-containing protein;protein_id=PDP43607.1;transl_table=11 NSLJ01000017.1 Genbank gene 60222 61538 . + . ID=gene-CLI86_07850;Name=CLI86_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07850 NSLJ01000017.1 Protein Homology CDS 60222 61538 . + 0 ID=cds-PDP43590.1;Parent=gene-CLI86_07850;Dbxref=NCBI_GP:PDP43590.1;Name=PDP43590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009037753.1;locus_tag=CLI86_07850;product=amidase;protein_id=PDP43590.1;transl_table=11 NSLJ01000017.1 Genbank gene 61555 62856 . + . ID=gene-CLI86_07855;Name=CLI86_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07855 NSLJ01000017.1 Protein Homology CDS 61555 62856 . + 0 ID=cds-PDP43591.1;Parent=gene-CLI86_07855;Dbxref=NCBI_GP:PDP43591.1;Name=PDP43591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223527.1;locus_tag=CLI86_07855;product=MFS transporter;protein_id=PDP43591.1;transl_table=11 NSLJ01000017.1 Genbank gene 62864 64102 . + . ID=gene-CLI86_07860;Name=CLI86_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07860 NSLJ01000017.1 Protein Homology CDS 62864 64102 . + 0 ID=cds-PDP43592.1;Parent=gene-CLI86_07860;Dbxref=NCBI_GP:PDP43592.1;Name=PDP43592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223528.1;locus_tag=CLI86_07860;product=hypothetical protein;protein_id=PDP43592.1;transl_table=11 NSLJ01000017.1 Genbank gene 64352 65524 . + . ID=gene-CLI86_07865;Name=CLI86_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07865 NSLJ01000017.1 Protein Homology CDS 64352 65524 . + 0 ID=cds-PDP43593.1;Parent=gene-CLI86_07865;Dbxref=NCBI_GP:PDP43593.1;Name=PDP43593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223529.1;locus_tag=CLI86_07865;product=DUF5009 domain-containing protein;protein_id=PDP43593.1;transl_table=11 NSLJ01000017.1 Genbank gene 65521 66372 . + . ID=gene-CLI86_07870;Name=CLI86_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07870 NSLJ01000017.1 Protein Homology CDS 65521 66372 . + 0 ID=cds-PDP43594.1;Parent=gene-CLI86_07870;Dbxref=NCBI_GP:PDP43594.1;Name=PDP43594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223530.1;locus_tag=CLI86_07870;product=ATPase;protein_id=PDP43594.1;transl_table=11 NSLJ01000017.1 Genbank gene 66369 67202 . + . ID=gene-CLI86_07875;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CLI86_07875 NSLJ01000017.1 Protein Homology CDS 66369 67202 . + 0 ID=cds-PDP43595.1;Parent=gene-CLI86_07875;Dbxref=NCBI_GP:PDP43595.1;Name=PDP43595.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223531.1;locus_tag=CLI86_07875;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=PDP43595.1;transl_table=11 NSLJ01000017.1 Genbank gene 67186 68418 . - . ID=gene-CLI86_07880;Name=CLI86_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07880 NSLJ01000017.1 Protein Homology CDS 67186 68418 . - 0 ID=cds-PDP43596.1;Parent=gene-CLI86_07880;Dbxref=NCBI_GP:PDP43596.1;Name=PDP43596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223532.1;locus_tag=CLI86_07880;product=Cof-type HAD-IIB family hydrolase;protein_id=PDP43596.1;transl_table=11 NSLJ01000017.1 Genbank gene 68451 69092 . - . ID=gene-CLI86_07885;Name=CLI86_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07885 NSLJ01000017.1 GeneMarkS+ CDS 68451 69092 . - 0 ID=cds-PDP43597.1;Parent=gene-CLI86_07885;Dbxref=NCBI_GP:PDP43597.1;Name=PDP43597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07885;product=hypothetical protein;protein_id=PDP43597.1;transl_table=11 NSLJ01000017.1 Genbank gene 69302 69577 . + . ID=gene-CLI86_07890;Name=CLI86_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07890 NSLJ01000017.1 Protein Homology CDS 69302 69577 . + 0 ID=cds-PDP43598.1;Parent=gene-CLI86_07890;Dbxref=NCBI_GP:PDP43598.1;Name=PDP43598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04149;locus_tag=CLI86_07890;product=rSAM-modified peptide;protein_id=PDP43598.1;transl_table=11 NSLJ01000017.1 Genbank gene 69888 71669 . + . ID=gene-CLI86_07895;Name=CLI86_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07895 NSLJ01000017.1 Protein Homology CDS 69888 71669 . + 0 ID=cds-PDP43599.1;Parent=gene-CLI86_07895;Dbxref=NCBI_GP:PDP43599.1;Name=PDP43599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223534.1;locus_tag=CLI86_07895;product=peptidase S41;protein_id=PDP43599.1;transl_table=11 NSLJ01000017.1 Genbank gene 71617 72819 . + . ID=gene-CLI86_07900;Name=CLI86_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07900 NSLJ01000017.1 Protein Homology CDS 71617 72819 . + 0 ID=cds-PDP43600.1;Parent=gene-CLI86_07900;Dbxref=NCBI_GP:PDP43600.1;Name=PDP43600.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05147.11;locus_tag=CLI86_07900;product=hypothetical protein;protein_id=PDP43600.1;transl_table=11 NSLJ01000017.1 Genbank gene 73813 74025 . + . ID=gene-CLI86_07905;Name=CLI86_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07905 NSLJ01000017.1 Protein Homology CDS 73813 74025 . + 0 ID=cds-PDP43601.1;Parent=gene-CLI86_07905;Dbxref=NCBI_GP:PDP43601.1;Name=PDP43601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04149;locus_tag=CLI86_07905;product=rSAM-modified peptide;protein_id=PDP43601.1;transl_table=11 NSLJ01000017.1 Genbank gene 74256 75824 . + . ID=gene-CLI86_07910;Name=CLI86_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07910 NSLJ01000017.1 Protein Homology CDS 74256 75824 . + 0 ID=cds-PDP43602.1;Parent=gene-CLI86_07910;Dbxref=NCBI_GP:PDP43602.1;Name=PDP43602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04055.19;locus_tag=CLI86_07910;product=hypothetical protein;protein_id=PDP43602.1;transl_table=11 NSLJ01000017.1 Genbank gene 75852 76148 . + . ID=gene-CLI86_07915;Name=CLI86_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07915 NSLJ01000017.1 GeneMarkS+ CDS 75852 76148 . + 0 ID=cds-PDP43603.1;Parent=gene-CLI86_07915;Dbxref=NCBI_GP:PDP43603.1;Name=PDP43603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07915;product=hypothetical protein;protein_id=PDP43603.1;transl_table=11 ##sequence-region NSLJ01000018.1 1 58828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000018.1 Genbank region 1 58828 . + . ID=NSLJ01000018.1:1..58828;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000018.1 Genbank gene 248 925 . + . ID=gene-CLI86_07920;Name=CLI86_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07920 NSLJ01000018.1 GeneMarkS+ CDS 248 925 . + 0 ID=cds-PDP43494.1;Parent=gene-CLI86_07920;Dbxref=NCBI_GP:PDP43494.1;Name=PDP43494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07920;product=hypothetical protein;protein_id=PDP43494.1;transl_table=11 NSLJ01000018.1 Genbank gene 1127 2506 . - . ID=gene-CLI86_07925;Name=CLI86_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07925 NSLJ01000018.1 Protein Homology CDS 1127 2506 . - 0 ID=cds-PDP43495.1;Parent=gene-CLI86_07925;Dbxref=NCBI_GP:PDP43495.1;Name=PDP43495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226066.1;locus_tag=CLI86_07925;product=peptidase M24 family protein;protein_id=PDP43495.1;transl_table=11 NSLJ01000018.1 Genbank gene 2595 5258 . + . ID=gene-CLI86_07930;Name=CLI86_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07930 NSLJ01000018.1 GeneMarkS+ CDS 2595 5258 . + 0 ID=cds-PDP43496.1;Parent=gene-CLI86_07930;Dbxref=NCBI_GP:PDP43496.1;Name=PDP43496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07930;product=class I SAM-dependent DNA methyltransferase;protein_id=PDP43496.1;transl_table=11 NSLJ01000018.1 Genbank gene 5415 6389 . + . ID=gene-CLI86_07935;Name=CLI86_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07935 NSLJ01000018.1 Protein Homology CDS 5415 6389 . + 0 ID=cds-PDP43497.1;Parent=gene-CLI86_07935;Dbxref=NCBI_GP:PDP43497.1;Name=PDP43497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226062.1;locus_tag=CLI86_07935;product=PhoH family protein;protein_id=PDP43497.1;transl_table=11 NSLJ01000018.1 Genbank gene 6410 7357 . + . ID=gene-CLI86_07940;Name=CLI86_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07940 NSLJ01000018.1 Protein Homology CDS 6410 7357 . + 0 ID=cds-PDP43498.1;Parent=gene-CLI86_07940;Dbxref=NCBI_GP:PDP43498.1;Name=PDP43498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226061.1;locus_tag=CLI86_07940;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=PDP43498.1;transl_table=11 NSLJ01000018.1 Genbank gene 7364 8125 . + . ID=gene-CLI86_07945;Name=CLI86_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07945 NSLJ01000018.1 Protein Homology CDS 7364 8125 . + 0 ID=cds-PDP43499.1;Parent=gene-CLI86_07945;Dbxref=NCBI_GP:PDP43499.1;Name=PDP43499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226060.1;locus_tag=CLI86_07945;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=PDP43499.1;transl_table=11 NSLJ01000018.1 Genbank gene 8122 8865 . + . ID=gene-CLI86_07950;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CLI86_07950 NSLJ01000018.1 Protein Homology CDS 8122 8865 . + 0 ID=cds-PDP43500.1;Parent=gene-CLI86_07950;Dbxref=NCBI_GP:PDP43500.1;Name=PDP43500.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226059.1;locus_tag=CLI86_07950;product=shikimate dehydrogenase;protein_id=PDP43500.1;transl_table=11 NSLJ01000018.1 Genbank gene 8906 11206 . + . ID=gene-CLI86_07955;Name=CLI86_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07955 NSLJ01000018.1 Protein Homology CDS 8906 11206 . + 0 ID=cds-PDP43501.1;Parent=gene-CLI86_07955;Dbxref=NCBI_GP:PDP43501.1;Name=PDP43501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008148520.1;locus_tag=CLI86_07955;product=alpha-mannosidase;protein_id=PDP43501.1;transl_table=11 NSLJ01000018.1 Genbank gene 11285 11710 . + . ID=gene-CLI86_07960;Name=CLI86_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07960 NSLJ01000018.1 GeneMarkS+ CDS 11285 11710 . + 0 ID=cds-PDP43502.1;Parent=gene-CLI86_07960;Dbxref=NCBI_GP:PDP43502.1;Name=PDP43502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07960;product=hypothetical protein;protein_id=PDP43502.1;transl_table=11 NSLJ01000018.1 Genbank gene 11766 12071 . + . ID=gene-CLI86_07965;Name=CLI86_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07965 NSLJ01000018.1 GeneMarkS+ CDS 11766 12071 . + 0 ID=cds-PDP43503.1;Parent=gene-CLI86_07965;Dbxref=NCBI_GP:PDP43503.1;Name=PDP43503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_07965;product=hypothetical protein;protein_id=PDP43503.1;transl_table=11 NSLJ01000018.1 Genbank gene 12157 13236 . + . ID=gene-CLI86_07970;Name=CLI86_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07970 NSLJ01000018.1 Protein Homology CDS 12157 13236 . + 0 ID=cds-PDP43504.1;Parent=gene-CLI86_07970;Dbxref=NCBI_GP:PDP43504.1;Name=PDP43504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146278.1;locus_tag=CLI86_07970;product=mannose-1-phosphate guanylyltransferase;protein_id=PDP43504.1;transl_table=11 NSLJ01000018.1 Genbank gene 13279 14544 . - . ID=gene-CLI86_07975;Name=CLI86_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07975 NSLJ01000018.1 Protein Homology CDS 13279 14544 . - 0 ID=cds-PDP43505.1;Parent=gene-CLI86_07975;Dbxref=NCBI_GP:PDP43505.1;Name=PDP43505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547719.1;locus_tag=CLI86_07975;product=nucleotide sugar dehydrogenase;protein_id=PDP43505.1;transl_table=11 NSLJ01000018.1 Genbank gene 14724 15998 . + . ID=gene-CLI86_07980;Name=CLI86_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07980 NSLJ01000018.1 Protein Homology CDS 14724 15998 . + 0 ID=cds-PDP43542.1;Parent=gene-CLI86_07980;Dbxref=NCBI_GP:PDP43542.1;Name=PDP43542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856883.1;locus_tag=CLI86_07980;product=DUF5103 domain-containing protein;protein_id=PDP43542.1;transl_table=11 NSLJ01000018.1 Genbank gene 16350 18002 . + . ID=gene-CLI86_07985;Name=CLI86_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07985 NSLJ01000018.1 Protein Homology CDS 16350 18002 . + 0 ID=cds-PDP43543.1;Parent=gene-CLI86_07985;Dbxref=NCBI_GP:PDP43543.1;Name=PDP43543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226053.1;locus_tag=CLI86_07985;product=DUF3352 domain-containing protein;protein_id=PDP43543.1;transl_table=11 NSLJ01000018.1 Genbank gene 18099 18863 . - . ID=gene-CLI86_07990;Name=CLI86_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07990 NSLJ01000018.1 Protein Homology CDS 18099 18863 . - 0 ID=cds-PDP43544.1;Parent=gene-CLI86_07990;Dbxref=NCBI_GP:PDP43544.1;Name=PDP43544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01066.19;locus_tag=CLI86_07990;product=hypothetical protein;protein_id=PDP43544.1;transl_table=11 NSLJ01000018.1 Genbank gene 18782 19318 . + . ID=gene-CLI86_07995;Name=CLI86_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_07995 NSLJ01000018.1 Protein Homology CDS 18782 19318 . + 0 ID=cds-PDP43506.1;Parent=gene-CLI86_07995;Dbxref=NCBI_GP:PDP43506.1;Name=PDP43506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226051.1;locus_tag=CLI86_07995;product=TIGR00730 family Rossman fold protein;protein_id=PDP43506.1;transl_table=11 NSLJ01000018.1 Genbank gene 19329 20399 . - . ID=gene-CLI86_08000;Name=CLI86_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08000 NSLJ01000018.1 Protein Homology CDS 19329 20399 . - 0 ID=cds-PDP43507.1;Parent=gene-CLI86_08000;Dbxref=NCBI_GP:PDP43507.1;Name=PDP43507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02661.16%2CHMM:PF13776.4;locus_tag=CLI86_08000;product=DUF4172 domain-containing protein;protein_id=PDP43507.1;transl_table=11 NSLJ01000018.1 Genbank gene 20727 24179 . + . ID=gene-CLI86_08005;Name=CLI86_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08005 NSLJ01000018.1 Protein Homology CDS 20727 24179 . + 0 ID=cds-PDP43508.1;Parent=gene-CLI86_08005;Dbxref=NCBI_GP:PDP43508.1;Name=PDP43508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226049.1;locus_tag=CLI86_08005;product=isoleucine--tRNA ligase;protein_id=PDP43508.1;transl_table=11 NSLJ01000018.1 Genbank gene 24247 24627 . + . ID=gene-CLI86_08010;Name=CLI86_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08010 NSLJ01000018.1 Protein Homology CDS 24247 24627 . + 0 ID=cds-PDP43509.1;Parent=gene-CLI86_08010;Dbxref=NCBI_GP:PDP43509.1;Name=PDP43509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641525.1;locus_tag=CLI86_08010;product=molecular chaperone DnaK;protein_id=PDP43509.1;transl_table=11 NSLJ01000018.1 Genbank gene 24641 25252 . + . ID=gene-CLI86_08015;Name=CLI86_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08015 NSLJ01000018.1 Protein Homology CDS 24641 25252 . + 0 ID=cds-PDP43510.1;Parent=gene-CLI86_08015;Dbxref=NCBI_GP:PDP43510.1;Name=PDP43510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865261.1;locus_tag=CLI86_08015;product=lipoprotein signal peptidase;protein_id=PDP43510.1;transl_table=11 NSLJ01000018.1 Genbank gene 25262 26017 . + . ID=gene-CLI86_08020;Name=CLI86_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08020 NSLJ01000018.1 Protein Homology CDS 25262 26017 . + 0 ID=cds-PDP43511.1;Parent=gene-CLI86_08020;Dbxref=NCBI_GP:PDP43511.1;Name=PDP43511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14129.4;locus_tag=CLI86_08020;product=DUF4296 domain-containing protein;protein_id=PDP43511.1;transl_table=11 NSLJ01000018.1 Genbank gene 25946 26671 . - . ID=gene-CLI86_08025;Name=CLI86_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08025 NSLJ01000018.1 GeneMarkS+ CDS 25946 26671 . - 0 ID=cds-PDP43512.1;Parent=gene-CLI86_08025;Dbxref=NCBI_GP:PDP43512.1;Name=PDP43512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08025;product=hypothetical protein;protein_id=PDP43512.1;transl_table=11 NSLJ01000018.1 Genbank gene 26860 27144 . - . ID=gene-CLI86_08030;Name=CLI86_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08030 NSLJ01000018.1 GeneMarkS+ CDS 26860 27144 . - 0 ID=cds-PDP43513.1;Parent=gene-CLI86_08030;Dbxref=NCBI_GP:PDP43513.1;Name=PDP43513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08030;product=hypothetical protein;protein_id=PDP43513.1;transl_table=11 NSLJ01000018.1 Genbank gene 27304 28254 . - . ID=gene-CLI86_08035;Name=CLI86_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08035 NSLJ01000018.1 Protein Homology CDS 27304 28254 . - 0 ID=cds-PDP43514.1;Parent=gene-CLI86_08035;Dbxref=NCBI_GP:PDP43514.1;Name=PDP43514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813475.1;locus_tag=CLI86_08035;product=glycosyltransferase;protein_id=PDP43514.1;transl_table=11 NSLJ01000018.1 Genbank gene 28407 28483 . - . ID=gene-CLI86_08040;Name=CLI86_08040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_08040 NSLJ01000018.1 tRNAscan-SE tRNA 28407 28483 . - . ID=rna-CLI86_08040;Parent=gene-CLI86_08040;anticodon=(pos:complement(28447..28449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08040;product=tRNA-Thr NSLJ01000018.1 tRNAscan-SE exon 28407 28483 . - . ID=exon-CLI86_08040-1;Parent=rna-CLI86_08040;anticodon=(pos:complement(28447..28449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08040;product=tRNA-Thr NSLJ01000018.1 Genbank gene 28673 29899 . + . ID=gene-CLI86_08045;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CLI86_08045 NSLJ01000018.1 Protein Homology CDS 28673 29899 . + 0 ID=cds-PDP43515.1;Parent=gene-CLI86_08045;Dbxref=NCBI_GP:PDP43515.1;Name=PDP43515.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226045.1;locus_tag=CLI86_08045;product=peptidase T;protein_id=PDP43515.1;transl_table=11 NSLJ01000018.1 Genbank gene 29902 30987 . + . ID=gene-CLI86_08050;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CLI86_08050 NSLJ01000018.1 Protein Homology CDS 29902 30987 . + 0 ID=cds-PDP43516.1;Parent=gene-CLI86_08050;Dbxref=NCBI_GP:PDP43516.1;Name=PDP43516.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007652881.1;locus_tag=CLI86_08050;product=glycine cleavage system protein T;protein_id=PDP43516.1;transl_table=11 NSLJ01000018.1 Genbank gene 30984 31985 . + . ID=gene-CLI86_08055;Name=CLI86_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08055 NSLJ01000018.1 Protein Homology CDS 30984 31985 . + 0 ID=cds-PDP43517.1;Parent=gene-CLI86_08055;Dbxref=NCBI_GP:PDP43517.1;Name=PDP43517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226043.1;locus_tag=CLI86_08055;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP43517.1;transl_table=11 NSLJ01000018.1 Genbank gene 32012 32230 . - . ID=gene-CLI86_08060;Name=CLI86_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08060 NSLJ01000018.1 GeneMarkS+ CDS 32012 32230 . - 0 ID=cds-PDP43518.1;Parent=gene-CLI86_08060;Dbxref=NCBI_GP:PDP43518.1;Name=PDP43518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08060;product=hypothetical protein;protein_id=PDP43518.1;transl_table=11 NSLJ01000018.1 Genbank gene 32661 32870 . + . ID=gene-CLI86_08065;Name=CLI86_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08065 NSLJ01000018.1 Protein Homology CDS 32661 32870 . + 0 ID=cds-PDP43519.1;Parent=gene-CLI86_08065;Dbxref=NCBI_GP:PDP43519.1;Name=PDP43519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225249.1;locus_tag=CLI86_08065;product=hypothetical protein;protein_id=PDP43519.1;transl_table=11 NSLJ01000018.1 Genbank gene 32904 33269 . - . ID=gene-CLI86_08070;Name=CLI86_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08070 NSLJ01000018.1 GeneMarkS+ CDS 32904 33269 . - 0 ID=cds-PDP43520.1;Parent=gene-CLI86_08070;Dbxref=NCBI_GP:PDP43520.1;Name=PDP43520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08070;product=hypothetical protein;protein_id=PDP43520.1;transl_table=11 NSLJ01000018.1 Genbank gene 33482 34024 . - . ID=gene-CLI86_08075;Name=CLI86_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08075 NSLJ01000018.1 Protein Homology CDS 33482 34024 . - 0 ID=cds-PDP43521.1;Parent=gene-CLI86_08075;Dbxref=NCBI_GP:PDP43521.1;Name=PDP43521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965330.1;locus_tag=CLI86_08075;product=arginine decarboxylase;protein_id=PDP43521.1;transl_table=11 NSLJ01000018.1 Genbank gene 34208 35188 . - . ID=gene-CLI86_08080;Name=CLI86_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08080 NSLJ01000018.1 Protein Homology CDS 34208 35188 . - 0 ID=cds-PDP43522.1;Parent=gene-CLI86_08080;Dbxref=NCBI_GP:PDP43522.1;Name=PDP43522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01569.19;locus_tag=CLI86_08080;product=phosphatase PAP2 family protein;protein_id=PDP43522.1;transl_table=11 NSLJ01000018.1 Genbank gene 35083 35664 . - . ID=gene-CLI86_08085;Name=CLI86_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08085 NSLJ01000018.1 Protein Homology CDS 35083 35664 . - 0 ID=cds-PDP43523.1;Parent=gene-CLI86_08085;Dbxref=NCBI_GP:PDP43523.1;Name=PDP43523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14378.4;locus_tag=CLI86_08085;product=phospholipid phosphatase;protein_id=PDP43523.1;transl_table=11 NSLJ01000018.1 Genbank gene 35683 36639 . - . ID=gene-CLI86_08090;Name=CLI86_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08090 NSLJ01000018.1 Protein Homology CDS 35683 36639 . - 0 ID=cds-PDP43524.1;Parent=gene-CLI86_08090;Dbxref=NCBI_GP:PDP43524.1;Name=PDP43524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226034.1;locus_tag=CLI86_08090;product=UDP-glucose 4-epimerase;protein_id=PDP43524.1;transl_table=11 NSLJ01000018.1 Genbank gene 36913 37482 . + . ID=gene-CLI86_08095;Name=CLI86_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08095 NSLJ01000018.1 Protein Homology CDS 36913 37482 . + 0 ID=cds-PDP43525.1;Parent=gene-CLI86_08095;Dbxref=NCBI_GP:PDP43525.1;Name=PDP43525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226032.1;locus_tag=CLI86_08095;product=RNA polymerase sigma-70 factor;protein_id=PDP43525.1;transl_table=11 NSLJ01000018.1 Genbank gene 37534 38514 . + . ID=gene-CLI86_08100;Name=CLI86_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08100 NSLJ01000018.1 Protein Homology CDS 37534 38514 . + 0 ID=cds-PDP43526.1;Parent=gene-CLI86_08100;Dbxref=NCBI_GP:PDP43526.1;Name=PDP43526.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04773.11;locus_tag=CLI86_08100;product=hypothetical protein;protein_id=PDP43526.1;transl_table=11 NSLJ01000018.1 Genbank gene 38717 42181 . + . ID=gene-CLI86_08105;Name=CLI86_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08105 NSLJ01000018.1 Protein Homology CDS 38717 42181 . + 0 ID=cds-PDP43527.1;Parent=gene-CLI86_08105;Dbxref=NCBI_GP:PDP43527.1;Name=PDP43527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226030.1;locus_tag=CLI86_08105;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43527.1;transl_table=11 NSLJ01000018.1 Genbank gene 42206 43741 . + . ID=gene-CLI86_08110;Name=CLI86_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08110 NSLJ01000018.1 Protein Homology CDS 42206 43741 . + 0 ID=cds-PDP43528.1;Parent=gene-CLI86_08110;Dbxref=NCBI_GP:PDP43528.1;Name=PDP43528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226029.1;locus_tag=CLI86_08110;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43528.1;transl_table=11 NSLJ01000018.1 Genbank gene 43761 44747 . + . ID=gene-CLI86_08115;Name=CLI86_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08115 NSLJ01000018.1 Protein Homology CDS 43761 44747 . + 0 ID=cds-PDP43545.1;Parent=gene-CLI86_08115;Dbxref=NCBI_GP:PDP43545.1;Name=PDP43545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226028.1;locus_tag=CLI86_08115;product=sugar phosphate isomerase/epimerase;protein_id=PDP43545.1;transl_table=11 NSLJ01000018.1 Genbank gene 45005 45334 . - . ID=gene-CLI86_08120;Name=CLI86_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08120 NSLJ01000018.1 Protein Homology CDS 45005 45334 . - 0 ID=cds-PDP43529.1;Parent=gene-CLI86_08120;Dbxref=NCBI_GP:PDP43529.1;Name=PDP43529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224570.1;locus_tag=CLI86_08120;product=hypothetical protein;protein_id=PDP43529.1;transl_table=11 NSLJ01000018.1 Genbank gene 45374 47278 . + . ID=gene-CLI86_08125;Name=CLI86_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08125 NSLJ01000018.1 Protein Homology CDS 45374 47278 . + 0 ID=cds-PDP43530.1;Parent=gene-CLI86_08125;Dbxref=NCBI_GP:PDP43530.1;Name=PDP43530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16;locus_tag=CLI86_08125;product=hypothetical protein;protein_id=PDP43530.1;transl_table=11 NSLJ01000018.1 Genbank gene 47671 48294 . - . ID=gene-CLI86_08130;Name=CLI86_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08130 NSLJ01000018.1 Protein Homology CDS 47671 48294 . - 0 ID=cds-PDP43531.1;Parent=gene-CLI86_08130;Dbxref=NCBI_GP:PDP43531.1;Name=PDP43531.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01648.18;locus_tag=CLI86_08130;product=siderophore biosynthesis protein;protein_id=PDP43531.1;transl_table=11 NSLJ01000018.1 Genbank gene 48297 48860 . - . ID=gene-CLI86_08135;Name=CLI86_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08135 NSLJ01000018.1 Protein Homology CDS 48297 48860 . - 0 ID=cds-PDP43532.1;Parent=gene-CLI86_08135;Dbxref=NCBI_GP:PDP43532.1;Name=PDP43532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226024.1;locus_tag=CLI86_08135;product=gliding motility protein GldD;protein_id=PDP43532.1;transl_table=11 NSLJ01000018.1 Genbank gene 48863 50137 . - . ID=gene-CLI86_08140;Name=CLI86_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08140 NSLJ01000018.1 Protein Homology CDS 48863 50137 . - 0 ID=cds-PDP43533.1;Parent=gene-CLI86_08140;Dbxref=NCBI_GP:PDP43533.1;Name=PDP43533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226023.1;locus_tag=CLI86_08140;product=hemolysin;protein_id=PDP43533.1;transl_table=11 NSLJ01000018.1 Genbank gene 50194 50643 . - . ID=gene-CLI86_08145;Name=CLI86_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08145 NSLJ01000018.1 Protein Homology CDS 50194 50643 . - 0 ID=cds-PDP43534.1;Parent=gene-CLI86_08145;Dbxref=NCBI_GP:PDP43534.1;Name=PDP43534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226022.1;locus_tag=CLI86_08145;product=single-stranded DNA-binding protein;protein_id=PDP43534.1;transl_table=11 NSLJ01000018.1 Genbank gene 50736 51812 . - . ID=gene-CLI86_08150;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CLI86_08150 NSLJ01000018.1 Protein Homology CDS 50736 51812 . - 0 ID=cds-PDP43535.1;Parent=gene-CLI86_08150;Dbxref=NCBI_GP:PDP43535.1;Name=PDP43535.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226021.1;locus_tag=CLI86_08150;product=A/G-specific adenine glycosylase;protein_id=PDP43535.1;transl_table=11 NSLJ01000018.1 Genbank gene 52050 52328 . + . ID=gene-CLI86_08155;Name=CLI86_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08155 NSLJ01000018.1 Protein Homology CDS 52050 52328 . + 0 ID=cds-PDP43536.1;Parent=gene-CLI86_08155;Dbxref=NCBI_GP:PDP43536.1;Name=PDP43536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538449.1;locus_tag=CLI86_08155;product=integration host factor subunit beta;protein_id=PDP43536.1;transl_table=11 NSLJ01000018.1 Genbank gene 52539 54113 . + . ID=gene-CLI86_08160;Name=CLI86_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08160 NSLJ01000018.1 Protein Homology CDS 52539 54113 . + 0 ID=cds-PDP43537.1;Parent=gene-CLI86_08160;Dbxref=NCBI_GP:PDP43537.1;Name=PDP43537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005636200.1;locus_tag=CLI86_08160;product=ribonuclease E/G;protein_id=PDP43537.1;transl_table=11 NSLJ01000018.1 Genbank gene 54193 55077 . + . ID=gene-CLI86_08165;Name=CLI86_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08165 NSLJ01000018.1 Protein Homology CDS 54193 55077 . + 0 ID=cds-PDP43538.1;Parent=gene-CLI86_08165;Dbxref=NCBI_GP:PDP43538.1;Name=PDP43538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226017.1;locus_tag=CLI86_08165;product=alpha/beta hydrolase;protein_id=PDP43538.1;transl_table=11 NSLJ01000018.1 Genbank gene 55193 55930 . + . ID=gene-CLI86_08170;Name=CLI86_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08170 NSLJ01000018.1 Protein Homology CDS 55193 55930 . + 0 ID=cds-PDP43539.1;Parent=gene-CLI86_08170;Dbxref=NCBI_GP:PDP43539.1;Name=PDP43539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06889.9;locus_tag=CLI86_08170;product=hypothetical protein;protein_id=PDP43539.1;transl_table=11 NSLJ01000018.1 Genbank gene 55986 56447 . - . ID=gene-CLI86_08175;Name=CLI86_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08175 NSLJ01000018.1 Protein Homology CDS 55986 56447 . - 0 ID=cds-PDP43540.1;Parent=gene-CLI86_08175;Dbxref=NCBI_GP:PDP43540.1;Name=PDP43540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226015.1;locus_tag=CLI86_08175;product=hypothetical protein;protein_id=PDP43540.1;transl_table=11 NSLJ01000018.1 Genbank gene 56495 57271 . + . ID=gene-CLI86_08180;Name=CLI86_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08180 NSLJ01000018.1 Protein Homology CDS 56495 57271 . + 0 ID=cds-PDP43546.1;Parent=gene-CLI86_08180;Dbxref=NCBI_GP:PDP43546.1;Name=PDP43546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637985.1;locus_tag=CLI86_08180;product=AMP nucleosidase;protein_id=PDP43546.1;transl_table=11 NSLJ01000018.1 Genbank gene 57283 58308 . + . ID=gene-CLI86_08185;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CLI86_08185 NSLJ01000018.1 Protein Homology CDS 57283 58308 . + 0 ID=cds-PDP43541.1;Parent=gene-CLI86_08185;Dbxref=NCBI_GP:PDP43541.1;Name=PDP43541.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226013.1;locus_tag=CLI86_08185;product=DNA polymerase III subunit delta;protein_id=PDP43541.1;transl_table=11 ##sequence-region NSLJ01000019.1 1 53292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000019.1 Genbank region 1 53292 . + . ID=NSLJ01000019.1:1..53292;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000019.1 Genbank gene 31 243 . + . ID=gene-CLI86_08190;Name=CLI86_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08190 NSLJ01000019.1 Protein Homology CDS 31 243 . + 0 ID=cds-PDP43483.1;Parent=gene-CLI86_08190;Dbxref=NCBI_GP:PDP43483.1;Name=PDP43483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224933.1;locus_tag=CLI86_08190;product=hypothetical protein;protein_id=PDP43483.1;transl_table=11 NSLJ01000019.1 Genbank gene 240 1553 . + . ID=gene-CLI86_08195;Name=CLI86_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08195 NSLJ01000019.1 Protein Homology CDS 240 1553 . + 0 ID=cds-PDP43444.1;Parent=gene-CLI86_08195;Dbxref=NCBI_GP:PDP43444.1;Name=PDP43444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637049.1;locus_tag=CLI86_08195;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=PDP43444.1;transl_table=11 NSLJ01000019.1 Genbank gene 1559 2455 . + . ID=gene-CLI86_08200;Name=CLI86_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08200 NSLJ01000019.1 Protein Homology CDS 1559 2455 . + 0 ID=cds-PDP43445.1;Parent=gene-CLI86_08200;Dbxref=NCBI_GP:PDP43445.1;Name=PDP43445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637050.1;locus_tag=CLI86_08200;product=acetyltransferase;protein_id=PDP43445.1;transl_table=11 NSLJ01000019.1 Genbank gene 2632 3669 . + . ID=gene-CLI86_08205;Name=CLI86_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08205 NSLJ01000019.1 Protein Homology CDS 2632 3669 . + 0 ID=cds-PDP43446.1;Parent=gene-CLI86_08205;Dbxref=NCBI_GP:PDP43446.1;Name=PDP43446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224088.1;locus_tag=CLI86_08205;product=glycosyltransferase family 2 protein;protein_id=PDP43446.1;transl_table=11 NSLJ01000019.1 Genbank gene 3876 3953 . - . ID=gene-CLI86_08210;Name=CLI86_08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_08210 NSLJ01000019.1 tRNAscan-SE tRNA 3876 3953 . - . ID=rna-CLI86_08210;Parent=gene-CLI86_08210;anticodon=(pos:complement(3916..3918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08210;product=tRNA-Val NSLJ01000019.1 tRNAscan-SE exon 3876 3953 . - . ID=exon-CLI86_08210-1;Parent=rna-CLI86_08210;anticodon=(pos:complement(3916..3918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08210;product=tRNA-Val NSLJ01000019.1 Genbank gene 3944 4222 . - . ID=gene-CLI86_08215;Name=CLI86_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08215 NSLJ01000019.1 Protein Homology CDS 3944 4222 . - 0 ID=cds-PDP43447.1;Parent=gene-CLI86_08215;Dbxref=NCBI_GP:PDP43447.1;Name=PDP43447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226127.1;locus_tag=CLI86_08215;product=hypothetical protein;protein_id=PDP43447.1;transl_table=11 NSLJ01000019.1 Genbank gene 4680 5816 . - . ID=gene-CLI86_08220;Name=CLI86_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08220 NSLJ01000019.1 Protein Homology CDS 4680 5816 . - 0 ID=cds-PDP43448.1;Parent=gene-CLI86_08220;Dbxref=NCBI_GP:PDP43448.1;Name=PDP43448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224091.1;locus_tag=CLI86_08220;product=PspC family transcriptional regulator;protein_id=PDP43448.1;transl_table=11 NSLJ01000019.1 Genbank gene 5829 6158 . - . ID=gene-CLI86_08225;Name=CLI86_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08225 NSLJ01000019.1 Protein Homology CDS 5829 6158 . - 0 ID=cds-PDP43449.1;Parent=gene-CLI86_08225;Dbxref=NCBI_GP:PDP43449.1;Name=PDP43449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099892.1;locus_tag=CLI86_08225;product=PadR family transcriptional regulator;protein_id=PDP43449.1;transl_table=11 NSLJ01000019.1 Genbank gene 6435 7298 . + . ID=gene-CLI86_08230;Name=CLI86_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08230 NSLJ01000019.1 Protein Homology CDS 6435 7298 . + 0 ID=cds-PDP43484.1;Parent=gene-CLI86_08230;Dbxref=NCBI_GP:PDP43484.1;Name=PDP43484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005863493.1;locus_tag=CLI86_08230;product=zinc ABC transporter permease;protein_id=PDP43484.1;transl_table=11 NSLJ01000019.1 Genbank gene 7381 7749 . + . ID=gene-CLI86_08235;Name=CLI86_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08235 NSLJ01000019.1 Protein Homology CDS 7381 7749 . + 0 ID=cds-PDP43450.1;Parent=gene-CLI86_08235;Dbxref=NCBI_GP:PDP43450.1;Name=PDP43450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224094.1;locus_tag=CLI86_08235;product=YraN family protein;protein_id=PDP43450.1;transl_table=11 NSLJ01000019.1 Genbank gene 7768 8121 . + . ID=gene-CLI86_08240;Name=CLI86_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08240 NSLJ01000019.1 Protein Homology CDS 7768 8121 . + 0 ID=cds-PDP43451.1;Parent=gene-CLI86_08240;Dbxref=NCBI_GP:PDP43451.1;Name=PDP43451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224095.1;locus_tag=CLI86_08240;product=hypothetical protein;protein_id=PDP43451.1;transl_table=11 NSLJ01000019.1 Genbank gene 8111 8854 . + . ID=gene-CLI86_08245;Name=CLI86_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08245 NSLJ01000019.1 Protein Homology CDS 8111 8854 . + 0 ID=cds-PDP43452.1;Parent=gene-CLI86_08245;Dbxref=NCBI_GP:PDP43452.1;Name=PDP43452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224096.1;locus_tag=CLI86_08245;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=PDP43452.1;transl_table=11 NSLJ01000019.1 Genbank gene 8961 12158 . + . ID=gene-CLI86_08250;Name=CLI86_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08250 NSLJ01000019.1 Protein Homology CDS 8961 12158 . + 0 ID=cds-PDP43453.1;Parent=gene-CLI86_08250;Dbxref=NCBI_GP:PDP43453.1;Name=PDP43453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17132.2;locus_tag=CLI86_08250;product=glycoside hydrolase family 2;protein_id=PDP43453.1;transl_table=11 NSLJ01000019.1 Genbank gene 12183 13043 . - . ID=gene-CLI86_08255;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CLI86_08255 NSLJ01000019.1 Protein Homology CDS 12183 13043 . - 0 ID=cds-PDP43454.1;Parent=gene-CLI86_08255;Dbxref=NCBI_GP:PDP43454.1;Name=PDP43454.1;gbkey=CDS;gene=atpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224098.1;locus_tag=CLI86_08255;product=ATP synthase F1 subunit gamma;protein_id=PDP43454.1;transl_table=11 NSLJ01000019.1 Genbank gene 13072 14664 . - . ID=gene-CLI86_08260;Name=CLI86_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08260 NSLJ01000019.1 Protein Homology CDS 13072 14664 . - 0 ID=cds-PDP43485.1;Parent=gene-CLI86_08260;Dbxref=NCBI_GP:PDP43485.1;Name=PDP43485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007838560.1;locus_tag=CLI86_08260;product=F0F1 ATP synthase subunit alpha;protein_id=PDP43485.1;transl_table=11 NSLJ01000019.1 Genbank gene 14697 15275 . - . ID=gene-CLI86_08265;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CLI86_08265 NSLJ01000019.1 Protein Homology CDS 14697 15275 . - 0 ID=cds-PDP43455.1;Parent=gene-CLI86_08265;Dbxref=NCBI_GP:PDP43455.1;Name=PDP43455.1;gbkey=CDS;gene=atpH;inference=COORDINATES: protein motif:HMM:PRK13429.1-3;locus_tag=CLI86_08265;product=ATP synthase F1 subunit delta;protein_id=PDP43455.1;transl_table=11 NSLJ01000019.1 Genbank gene 15344 15838 . - . ID=gene-CLI86_08270;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CLI86_08270 NSLJ01000019.1 Protein Homology CDS 15344 15838 . - 0 ID=cds-PDP43456.1;Parent=gene-CLI86_08270;Dbxref=NCBI_GP:PDP43456.1;Name=PDP43456.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224101.1;locus_tag=CLI86_08270;product=ATP synthase F0 subunit B;protein_id=PDP43456.1;transl_table=11 NSLJ01000019.1 Genbank gene 15856 16107 . - . ID=gene-CLI86_08275;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CLI86_08275 NSLJ01000019.1 Protein Homology CDS 15856 16107 . - 0 ID=cds-PDP43457.1;Parent=gene-CLI86_08275;Dbxref=NCBI_GP:PDP43457.1;Name=PDP43457.1;gbkey=CDS;gene=atpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224102.1;locus_tag=CLI86_08275;product=ATP synthase F0 subunit C;protein_id=PDP43457.1;transl_table=11 NSLJ01000019.1 Genbank gene 16148 17197 . - . ID=gene-CLI86_08280;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CLI86_08280 NSLJ01000019.1 Protein Homology CDS 16148 17197 . - 0 ID=cds-PDP43458.1;Parent=gene-CLI86_08280;Dbxref=NCBI_GP:PDP43458.1;Name=PDP43458.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224103.1;locus_tag=CLI86_08280;product=ATP synthase F0 subunit A;protein_id=PDP43458.1;transl_table=11 NSLJ01000019.1 Genbank gene 17220 17660 . - . ID=gene-CLI86_08285;Name=CLI86_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08285 NSLJ01000019.1 GeneMarkS+ CDS 17220 17660 . - 0 ID=cds-PDP43459.1;Parent=gene-CLI86_08285;Dbxref=NCBI_GP:PDP43459.1;Name=PDP43459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08285;product=hypothetical protein;protein_id=PDP43459.1;transl_table=11 NSLJ01000019.1 Genbank gene 17689 17934 . - . ID=gene-CLI86_08290;Name=CLI86_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08290 NSLJ01000019.1 Protein Homology CDS 17689 17934 . - 0 ID=cds-PDP43460.1;Parent=gene-CLI86_08290;Dbxref=NCBI_GP:PDP43460.1;Name=PDP43460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224105.1;locus_tag=CLI86_08290;product=hypothetical protein;protein_id=PDP43460.1;transl_table=11 NSLJ01000019.1 Genbank gene 17939 19462 . - . ID=gene-CLI86_08295;Name=CLI86_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08295 NSLJ01000019.1 Protein Homology CDS 17939 19462 . - 0 ID=cds-PDP43461.1;Parent=gene-CLI86_08295;Dbxref=NCBI_GP:PDP43461.1;Name=PDP43461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224106.1;locus_tag=CLI86_08295;product=F0F1 ATP synthase subunit beta;protein_id=PDP43461.1;transl_table=11 NSLJ01000019.1 Genbank gene 19500 19745 . + . ID=gene-CLI86_08300;Name=CLI86_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08300 NSLJ01000019.1 GeneMarkS+ CDS 19500 19745 . + 0 ID=cds-PDP43462.1;Parent=gene-CLI86_08300;Dbxref=NCBI_GP:PDP43462.1;Name=PDP43462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08300;product=hypothetical protein;protein_id=PDP43462.1;transl_table=11 NSLJ01000019.1 Genbank gene 19726 21024 . - . ID=gene-CLI86_08305;Name=CLI86_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08305 NSLJ01000019.1 Protein Homology CDS 19726 21024 . - 0 ID=cds-PDP43463.1;Parent=gene-CLI86_08305;Dbxref=NCBI_GP:PDP43463.1;Name=PDP43463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360625.1;locus_tag=CLI86_08305;product=peptidase S41;protein_id=PDP43463.1;transl_table=11 NSLJ01000019.1 Genbank gene 21071 21862 . - . ID=gene-CLI86_08310;Name=CLI86_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08310 NSLJ01000019.1 Protein Homology CDS 21071 21862 . - 0 ID=cds-PDP43464.1;Parent=gene-CLI86_08310;Dbxref=NCBI_GP:PDP43464.1;Name=PDP43464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10988.6;locus_tag=CLI86_08310;product=DUF2807 domain-containing protein;protein_id=PDP43464.1;transl_table=11 NSLJ01000019.1 Genbank gene 21935 23512 . - . ID=gene-CLI86_08315;Name=CLI86_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08315 NSLJ01000019.1 Protein Homology CDS 21935 23512 . - 0 ID=cds-PDP43465.1;Parent=gene-CLI86_08315;Dbxref=NCBI_GP:PDP43465.1;Name=PDP43465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224109.1;locus_tag=CLI86_08315;product=peptide chain release factor 3;protein_id=PDP43465.1;transl_table=11 NSLJ01000019.1 Genbank gene 23525 24388 . - . ID=gene-CLI86_08320;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CLI86_08320 NSLJ01000019.1 Protein Homology CDS 23525 24388 . - 0 ID=cds-PDP43466.1;Parent=gene-CLI86_08320;Dbxref=NCBI_GP:PDP43466.1;Name=PDP43466.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634066.1;locus_tag=CLI86_08320;product=dTDP-4-dehydrorhamnose reductase;protein_id=PDP43466.1;transl_table=11 NSLJ01000019.1 Genbank gene 24407 24940 . - . ID=gene-CLI86_08325;Name=CLI86_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08325 NSLJ01000019.1 Protein Homology CDS 24407 24940 . - 0 ID=cds-PDP43467.1;Parent=gene-CLI86_08325;Dbxref=NCBI_GP:PDP43467.1;Name=PDP43467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842583.1;locus_tag=CLI86_08325;product=DUF4924 domain-containing protein;protein_id=PDP43467.1;transl_table=11 NSLJ01000019.1 Genbank gene 25032 25889 . + . ID=gene-CLI86_08330;Name=CLI86_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08330 NSLJ01000019.1 Protein Homology CDS 25032 25889 . + 0 ID=cds-PDP43468.1;Parent=gene-CLI86_08330;Dbxref=NCBI_GP:PDP43468.1;Name=PDP43468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224112.1;locus_tag=CLI86_08330;product=MBL fold metallo-hydrolase;protein_id=PDP43468.1;transl_table=11 NSLJ01000019.1 Genbank gene 26014 28872 . - . ID=gene-CLI86_08335;Name=CLI86_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08335 NSLJ01000019.1 Protein Homology CDS 26014 28872 . - 0 ID=cds-PDP43469.1;Parent=gene-CLI86_08335;Dbxref=NCBI_GP:PDP43469.1;Name=PDP43469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224113.1;locus_tag=CLI86_08335;product=insulinase family protein;protein_id=PDP43469.1;transl_table=11 NSLJ01000019.1 Genbank gene 29038 30555 . - . ID=gene-CLI86_08340;Name=CLI86_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08340 NSLJ01000019.1 Protein Homology CDS 29038 30555 . - 0 ID=cds-PDP43486.1;Parent=gene-CLI86_08340;Dbxref=NCBI_GP:PDP43486.1;Name=PDP43486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964407.1;locus_tag=CLI86_08340;product=membrane-bound O-acyltransferase family protein;protein_id=PDP43486.1;transl_table=11 NSLJ01000019.1 Genbank gene 30606 31997 . - . ID=gene-CLI86_08345;Name=CLI86_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08345 NSLJ01000019.1 Protein Homology CDS 30606 31997 . - 0 ID=cds-PDP43487.1;Parent=gene-CLI86_08345;Dbxref=NCBI_GP:PDP43487.1;Name=PDP43487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224116.1;locus_tag=CLI86_08345;product=hypothetical protein;protein_id=PDP43487.1;transl_table=11 NSLJ01000019.1 Genbank gene 31972 33390 . - . ID=gene-CLI86_08350;Name=CLI86_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08350 NSLJ01000019.1 Protein Homology CDS 31972 33390 . - 0 ID=cds-PDP43488.1;Parent=gene-CLI86_08350;Dbxref=NCBI_GP:PDP43488.1;Name=PDP43488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224117.1;locus_tag=CLI86_08350;product=hypothetical protein;protein_id=PDP43488.1;transl_table=11 NSLJ01000019.1 Genbank gene 33689 35158 . + . ID=gene-CLI86_08355;Name=CLI86_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08355 NSLJ01000019.1 Protein Homology CDS 33689 35158 . + 0 ID=cds-PDP43470.1;Parent=gene-CLI86_08355;Dbxref=NCBI_GP:PDP43470.1;Name=PDP43470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224118.1;locus_tag=CLI86_08355;product=metal-independent alpha-mannosidase;protein_id=PDP43470.1;transl_table=11 NSLJ01000019.1 Genbank gene 35358 37265 . + . ID=gene-CLI86_08360;Name=CLI86_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08360 NSLJ01000019.1 Protein Homology CDS 35358 37265 . + 0 ID=cds-PDP43471.1;Parent=gene-CLI86_08360;Dbxref=NCBI_GP:PDP43471.1;Name=PDP43471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149022.1;locus_tag=CLI86_08360;product=molecular chaperone DnaK;protein_id=PDP43471.1;transl_table=11 NSLJ01000019.1 Genbank pseudogene 37823 38394 . + . ID=gene-CLI86_08365;Name=CLI86_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08365;pseudo=true NSLJ01000019.1 Protein Homology CDS 37823 38394 . + 0 ID=cds-CLI86_08365;Parent=gene-CLI86_08365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354628.1;locus_tag=CLI86_08365;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000019.1 Genbank pseudogene 38533 38657 . - . ID=gene-CLI86_08370;Name=CLI86_08370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08370;pseudo=true NSLJ01000019.1 Protein Homology CDS 38533 38657 . - 0 ID=cds-CLI86_08370;Parent=gene-CLI86_08370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874998.1;locus_tag=CLI86_08370;product=polyketide cyclase;pseudo=true;transl_table=11 NSLJ01000019.1 Genbank pseudogene 38772 40229 . - . ID=gene-CLI86_08375;Name=CLI86_08375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08375;pseudo=true NSLJ01000019.1 Protein Homology CDS 38772 40229 . - 0 ID=cds-CLI86_08375;Parent=gene-CLI86_08375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019149558.1;locus_tag=CLI86_08375;product=transcriptional regulator;pseudo=true;transl_table=11 NSLJ01000019.1 Genbank gene 40243 40617 . - . ID=gene-CLI86_08380;Name=CLI86_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08380 NSLJ01000019.1 Protein Homology CDS 40243 40617 . - 0 ID=cds-PDP43489.1;Parent=gene-CLI86_08380;Dbxref=NCBI_GP:PDP43489.1;Name=PDP43489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004332127.1;locus_tag=CLI86_08380;product=hypothetical protein;protein_id=PDP43489.1;transl_table=11 NSLJ01000019.1 Genbank gene 40719 41801 . - . ID=gene-CLI86_08385;Name=CLI86_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08385 NSLJ01000019.1 Protein Homology CDS 40719 41801 . - 0 ID=cds-PDP43472.1;Parent=gene-CLI86_08385;Dbxref=NCBI_GP:PDP43472.1;Name=PDP43472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004332010.1;locus_tag=CLI86_08385;product=hypothetical protein;protein_id=PDP43472.1;transl_table=11 NSLJ01000019.1 Genbank gene 41911 43542 . - . ID=gene-CLI86_08390;Name=CLI86_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08390 NSLJ01000019.1 Protein Homology CDS 41911 43542 . - 0 ID=cds-PDP43473.1;Parent=gene-CLI86_08390;Dbxref=NCBI_GP:PDP43473.1;Name=PDP43473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434915.1;locus_tag=CLI86_08390;product=type I restriction-modification system subunit M;protein_id=PDP43473.1;transl_table=11 NSLJ01000019.1 Genbank gene 43557 44627 . - . ID=gene-CLI86_08395;Name=CLI86_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08395 NSLJ01000019.1 Protein Homology CDS 43557 44627 . - 0 ID=cds-PDP43474.1;Parent=gene-CLI86_08395;Dbxref=NCBI_GP:PDP43474.1;Name=PDP43474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601694.1;locus_tag=CLI86_08395;product=anticodon nuclease;protein_id=PDP43474.1;transl_table=11 NSLJ01000019.1 Genbank gene 44628 45887 . - . ID=gene-CLI86_08400;Name=CLI86_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08400 NSLJ01000019.1 Protein Homology CDS 44628 45887 . - 0 ID=cds-PDP43475.1;Parent=gene-CLI86_08400;Dbxref=NCBI_GP:PDP43475.1;Name=PDP43475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=CLI86_08400;product=hypothetical protein;protein_id=PDP43475.1;transl_table=11 NSLJ01000019.1 Genbank gene 45887 46906 . - . ID=gene-CLI86_08405;Name=CLI86_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08405 NSLJ01000019.1 Protein Homology CDS 45887 46906 . - 0 ID=cds-PDP43476.1;Parent=gene-CLI86_08405;Dbxref=NCBI_GP:PDP43476.1;Name=PDP43476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965933.1;locus_tag=CLI86_08405;product=hypothetical protein;protein_id=PDP43476.1;transl_table=11 NSLJ01000019.1 Genbank gene 46906 47322 . - . ID=gene-CLI86_08410;Name=CLI86_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08410 NSLJ01000019.1 Protein Homology CDS 46906 47322 . - 0 ID=cds-PDP43477.1;Parent=gene-CLI86_08410;Dbxref=NCBI_GP:PDP43477.1;Name=PDP43477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06250.9;locus_tag=CLI86_08410;product=hypothetical protein;protein_id=PDP43477.1;transl_table=11 NSLJ01000019.1 Genbank gene 47330 50335 . - . ID=gene-CLI86_08415;Name=CLI86_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08415 NSLJ01000019.1 Protein Homology CDS 47330 50335 . - 0 ID=cds-PDP43478.1;Parent=gene-CLI86_08415;Dbxref=NCBI_GP:PDP43478.1;Name=PDP43478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016200262.1;locus_tag=CLI86_08415;product=DEAD/DEAH box helicase;protein_id=PDP43478.1;transl_table=11 NSLJ01000019.1 Genbank gene 50332 50538 . - . ID=gene-CLI86_08420;Name=CLI86_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08420 NSLJ01000019.1 Protein Homology CDS 50332 50538 . - 0 ID=cds-PDP43479.1;Parent=gene-CLI86_08420;Dbxref=NCBI_GP:PDP43479.1;Name=PDP43479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224132.1;locus_tag=CLI86_08420;product=transcriptional regulator;protein_id=PDP43479.1;transl_table=11 NSLJ01000019.1 Genbank pseudogene 50654 51376 . - . ID=gene-CLI86_08425;Name=CLI86_08425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08425;pseudo=true NSLJ01000019.1 Protein Homology CDS 50654 51376 . - 0 ID=cds-CLI86_08425;Parent=gene-CLI86_08425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457886.1;locus_tag=CLI86_08425;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000019.1 Genbank gene 51402 52343 . - . ID=gene-CLI86_08430;Name=CLI86_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08430 NSLJ01000019.1 Protein Homology CDS 51402 52343 . - 0 ID=cds-PDP43480.1;Parent=gene-CLI86_08430;Dbxref=NCBI_GP:PDP43480.1;Name=PDP43480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224130.1;locus_tag=CLI86_08430;product=mobilization protein;protein_id=PDP43480.1;transl_table=11 NSLJ01000019.1 Genbank gene 52333 52488 . - . ID=gene-CLI86_08435;Name=CLI86_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08435 NSLJ01000019.1 Protein Homology CDS 52333 52488 . - 0 ID=cds-PDP43481.1;Parent=gene-CLI86_08435;Dbxref=NCBI_GP:PDP43481.1;Name=PDP43481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05713.9;locus_tag=CLI86_08435;product=hypothetical protein;protein_id=PDP43481.1;transl_table=11 NSLJ01000019.1 Genbank gene 52977 53183 . + . ID=gene-CLI86_08440;Name=CLI86_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08440 NSLJ01000019.1 Protein Homology CDS 52977 53183 . + 0 ID=cds-PDP43482.1;Parent=gene-CLI86_08440;Dbxref=NCBI_GP:PDP43482.1;Name=PDP43482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03400.11;locus_tag=CLI86_08440;product=hypothetical protein;protein_id=PDP43482.1;transl_table=11 ##sequence-region NSLJ01000001.1 1 186070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000001.1 Genbank region 1 186070 . + . ID=NSLJ01000001.1:1..186070;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000001.1 Genbank gene 1 244 . - . ID=gene-CLI86_00005;Name=CLI86_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00005;partial=true;start_range=.,1 NSLJ01000001.1 Protein Homology CDS 1 244 . - 0 ID=cds-PDP45199.1;Parent=gene-CLI86_00005;Dbxref=NCBI_GP:PDP45199.1;Name=PDP45199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224932.1;locus_tag=CLI86_00005;partial=true;product=IS110 family transposase;protein_id=PDP45199.1;start_range=.,1;transl_table=11 NSLJ01000001.1 Genbank gene 206 394 . + . ID=gene-CLI86_00010;Name=CLI86_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00010 NSLJ01000001.1 Protein Homology CDS 206 394 . + 0 ID=cds-PDP45200.1;Parent=gene-CLI86_00010;Dbxref=NCBI_GP:PDP45200.1;Name=PDP45200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_00010;product=hypothetical protein;protein_id=PDP45200.1;transl_table=11 NSLJ01000001.1 Genbank gene 410 1798 . + . ID=gene-CLI86_00015;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CLI86_00015 NSLJ01000001.1 Protein Homology CDS 410 1798 . + 0 ID=cds-PDP45064.1;Parent=gene-CLI86_00015;Dbxref=NCBI_GP:PDP45064.1;Name=PDP45064.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225217.1;locus_tag=CLI86_00015;product=phosphoglucosamine mutase;protein_id=PDP45064.1;transl_table=11 NSLJ01000001.1 Genbank gene 1932 2474 . + . ID=gene-CLI86_00020;Name=CLI86_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00020 NSLJ01000001.1 Protein Homology CDS 1932 2474 . + 0 ID=cds-PDP45201.1;Parent=gene-CLI86_00020;Dbxref=NCBI_GP:PDP45201.1;Name=PDP45201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156053.1;locus_tag=CLI86_00020;product=TrmH family RNA methyltransferase;protein_id=PDP45201.1;transl_table=11 NSLJ01000001.1 Genbank gene 2451 3065 . - . ID=gene-CLI86_00025;Name=CLI86_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00025 NSLJ01000001.1 Protein Homology CDS 2451 3065 . - 0 ID=cds-PDP45202.1;Parent=gene-CLI86_00025;Dbxref=NCBI_GP:PDP45202.1;Name=PDP45202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225215.1;locus_tag=CLI86_00025;product=DUF4294 domain-containing protein;protein_id=PDP45202.1;transl_table=11 NSLJ01000001.1 Genbank gene 3070 3744 . - . ID=gene-CLI86_00030;Name=CLI86_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00030 NSLJ01000001.1 Protein Homology CDS 3070 3744 . - 0 ID=cds-PDP45065.1;Parent=gene-CLI86_00030;Dbxref=NCBI_GP:PDP45065.1;Name=PDP45065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855801.1;locus_tag=CLI86_00030;product=peptidylprolyl isomerase;protein_id=PDP45065.1;transl_table=11 NSLJ01000001.1 Genbank gene 3798 4703 . - . ID=gene-CLI86_00035;Name=CLI86_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00035 NSLJ01000001.1 Protein Homology CDS 3798 4703 . - 0 ID=cds-PDP45066.1;Parent=gene-CLI86_00035;Dbxref=NCBI_GP:PDP45066.1;Name=PDP45066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225213.1;locus_tag=CLI86_00035;product=nucleotidyltransferase;protein_id=PDP45066.1;transl_table=11 NSLJ01000001.1 Genbank gene 5190 5975 . + . ID=gene-CLI86_00040;Name=CLI86_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00040 NSLJ01000001.1 Protein Homology CDS 5190 5975 . + 0 ID=cds-PDP45067.1;Parent=gene-CLI86_00040;Dbxref=NCBI_GP:PDP45067.1;Name=PDP45067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367323.1;locus_tag=CLI86_00040;product=hypothetical protein;protein_id=PDP45067.1;transl_table=11 NSLJ01000001.1 Genbank gene 6416 7138 . - . ID=gene-CLI86_00045;Name=CLI86_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00045 NSLJ01000001.1 Protein Homology CDS 6416 7138 . - 0 ID=cds-PDP45068.1;Parent=gene-CLI86_00045;Dbxref=NCBI_GP:PDP45068.1;Name=PDP45068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225212.1;locus_tag=CLI86_00045;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=PDP45068.1;transl_table=11 NSLJ01000001.1 Genbank gene 7166 9628 . - . ID=gene-CLI86_00050;Name=CLI86_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00050 NSLJ01000001.1 Protein Homology CDS 7166 9628 . - 0 ID=cds-PDP45069.1;Parent=gene-CLI86_00050;Dbxref=NCBI_GP:PDP45069.1;Name=PDP45069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225211.1;locus_tag=CLI86_00050;product=phenylalanine--tRNA ligase subunit beta;protein_id=PDP45069.1;transl_table=11 NSLJ01000001.1 Genbank gene 9795 10469 . + . ID=gene-CLI86_00055;Name=CLI86_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00055 NSLJ01000001.1 Protein Homology CDS 9795 10469 . + 0 ID=cds-PDP45203.1;Parent=gene-CLI86_00055;Dbxref=NCBI_GP:PDP45203.1;Name=PDP45203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809806.1;locus_tag=CLI86_00055;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=PDP45203.1;transl_table=11 NSLJ01000001.1 Genbank gene 10517 11419 . + . ID=gene-CLI86_00060;Name=CLI86_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00060 NSLJ01000001.1 Protein Homology CDS 10517 11419 . + 0 ID=cds-PDP45070.1;Parent=gene-CLI86_00060;Dbxref=NCBI_GP:PDP45070.1;Name=PDP45070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02517.14;locus_tag=CLI86_00060;product=hypothetical protein;protein_id=PDP45070.1;transl_table=11 NSLJ01000001.1 Genbank gene 11512 13122 . + . ID=gene-CLI86_00065;Name=CLI86_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00065 NSLJ01000001.1 Protein Homology CDS 11512 13122 . + 0 ID=cds-PDP45071.1;Parent=gene-CLI86_00065;Dbxref=NCBI_GP:PDP45071.1;Name=PDP45071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225207.1;locus_tag=CLI86_00065;product=hypothetical protein;protein_id=PDP45071.1;transl_table=11 NSLJ01000001.1 Genbank gene 13133 13573 . - . ID=gene-CLI86_00070;Name=CLI86_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00070 NSLJ01000001.1 Protein Homology CDS 13133 13573 . - 0 ID=cds-PDP45072.1;Parent=gene-CLI86_00070;Dbxref=NCBI_GP:PDP45072.1;Name=PDP45072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866805.1;locus_tag=CLI86_00070;product=nucleoside deaminase;protein_id=PDP45072.1;transl_table=11 NSLJ01000001.1 Genbank gene 13573 13800 . - . ID=gene-CLI86_00075;Name=CLI86_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00075 NSLJ01000001.1 Protein Homology CDS 13573 13800 . - 0 ID=cds-PDP45073.1;Parent=gene-CLI86_00075;Dbxref=NCBI_GP:PDP45073.1;Name=PDP45073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634394.1;locus_tag=CLI86_00075;product=hypothetical protein;protein_id=PDP45073.1;transl_table=11 NSLJ01000001.1 Genbank gene 13831 14412 . - . ID=gene-CLI86_00080;Name=CLI86_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00080 NSLJ01000001.1 Protein Homology CDS 13831 14412 . - 0 ID=cds-PDP45074.1;Parent=gene-CLI86_00080;Dbxref=NCBI_GP:PDP45074.1;Name=PDP45074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225204.1;locus_tag=CLI86_00080;product=hypothetical protein;protein_id=PDP45074.1;transl_table=11 NSLJ01000001.1 Genbank gene 15143 15952 . - . ID=gene-CLI86_00085;Name=CLI86_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00085 NSLJ01000001.1 Protein Homology CDS 15143 15952 . - 0 ID=cds-PDP45075.1;Parent=gene-CLI86_00085;Dbxref=NCBI_GP:PDP45075.1;Name=PDP45075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225202.1;locus_tag=CLI86_00085;product=hypothetical protein;protein_id=PDP45075.1;transl_table=11 NSLJ01000001.1 Genbank gene 16083 16412 . - . ID=gene-CLI86_00090;Name=CLI86_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00090 NSLJ01000001.1 GeneMarkS+ CDS 16083 16412 . - 0 ID=cds-PDP45076.1;Parent=gene-CLI86_00090;Dbxref=NCBI_GP:PDP45076.1;Name=PDP45076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00090;product=hypothetical protein;protein_id=PDP45076.1;transl_table=11 NSLJ01000001.1 Genbank gene 16627 16962 . - . ID=gene-CLI86_00095;Name=CLI86_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00095 NSLJ01000001.1 GeneMarkS+ CDS 16627 16962 . - 0 ID=cds-PDP45077.1;Parent=gene-CLI86_00095;Dbxref=NCBI_GP:PDP45077.1;Name=PDP45077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00095;product=hypothetical protein;protein_id=PDP45077.1;transl_table=11 NSLJ01000001.1 Genbank gene 16971 17720 . - . ID=gene-CLI86_00100;Name=CLI86_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00100 NSLJ01000001.1 GeneMarkS+ CDS 16971 17720 . - 0 ID=cds-PDP45078.1;Parent=gene-CLI86_00100;Dbxref=NCBI_GP:PDP45078.1;Name=PDP45078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00100;product=hypothetical protein;protein_id=PDP45078.1;transl_table=11 NSLJ01000001.1 Genbank gene 17720 19075 . - . ID=gene-CLI86_00105;Name=CLI86_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00105 NSLJ01000001.1 Protein Homology CDS 17720 19075 . - 0 ID=cds-PDP45204.1;Parent=gene-CLI86_00105;Dbxref=NCBI_GP:PDP45204.1;Name=PDP45204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225198.1;locus_tag=CLI86_00105;product=type IV secretion protein Rhs;protein_id=PDP45204.1;transl_table=11 NSLJ01000001.1 Genbank gene 19238 19795 . - . ID=gene-CLI86_00110;Name=CLI86_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00110 NSLJ01000001.1 GeneMarkS+ CDS 19238 19795 . - 0 ID=cds-PDP45079.1;Parent=gene-CLI86_00110;Dbxref=NCBI_GP:PDP45079.1;Name=PDP45079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00110;product=hypothetical protein;protein_id=PDP45079.1;transl_table=11 NSLJ01000001.1 Genbank gene 19895 21781 . - . ID=gene-CLI86_00115;Name=CLI86_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00115 NSLJ01000001.1 Protein Homology CDS 19895 21781 . - 0 ID=cds-PDP45080.1;Parent=gene-CLI86_00115;Dbxref=NCBI_GP:PDP45080.1;Name=PDP45080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225194.1;locus_tag=CLI86_00115;product=type IV secretion protein Rhs;protein_id=PDP45080.1;transl_table=11 NSLJ01000001.1 Genbank gene 21866 22675 . - . ID=gene-CLI86_00120;Name=CLI86_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00120 NSLJ01000001.1 Protein Homology CDS 21866 22675 . - 0 ID=cds-PDP45081.1;Parent=gene-CLI86_00120;Dbxref=NCBI_GP:PDP45081.1;Name=PDP45081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225193.1;locus_tag=CLI86_00120;product=hypothetical protein;protein_id=PDP45081.1;transl_table=11 NSLJ01000001.1 Genbank gene 22677 24611 . - . ID=gene-CLI86_00125;Name=CLI86_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00125 NSLJ01000001.1 Protein Homology CDS 22677 24611 . - 0 ID=cds-PDP45205.1;Parent=gene-CLI86_00125;Dbxref=NCBI_GP:PDP45205.1;Name=PDP45205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225192.1;locus_tag=CLI86_00125;product=type IV secretion protein Rhs;protein_id=PDP45205.1;transl_table=11 NSLJ01000001.1 Genbank gene 24757 25395 . - . ID=gene-CLI86_00130;Name=CLI86_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00130 NSLJ01000001.1 GeneMarkS+ CDS 24757 25395 . - 0 ID=cds-PDP45082.1;Parent=gene-CLI86_00130;Dbxref=NCBI_GP:PDP45082.1;Name=PDP45082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00130;product=hypothetical protein;protein_id=PDP45082.1;transl_table=11 NSLJ01000001.1 Genbank gene 25404 28487 . - . ID=gene-CLI86_00135;Name=CLI86_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00135 NSLJ01000001.1 Protein Homology CDS 25404 28487 . - 0 ID=cds-PDP45083.1;Parent=gene-CLI86_00135;Dbxref=NCBI_GP:PDP45083.1;Name=PDP45083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225192.1;locus_tag=CLI86_00135;product=hypothetical protein;protein_id=PDP45083.1;transl_table=11 NSLJ01000001.1 Genbank gene 28608 31502 . - . ID=gene-CLI86_00140;Name=CLI86_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00140 NSLJ01000001.1 Protein Homology CDS 28608 31502 . - 0 ID=cds-PDP45084.1;Parent=gene-CLI86_00140;Dbxref=NCBI_GP:PDP45084.1;Name=PDP45084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03534.11%2CHMM:PF12256.6%2CHMM:PF13517.4;locus_tag=CLI86_00140;product=hypothetical protein;protein_id=PDP45084.1;transl_table=11 NSLJ01000001.1 Genbank gene 32061 33281 . - . ID=gene-CLI86_00145;Name=CLI86_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00145 NSLJ01000001.1 Protein Homology CDS 32061 33281 . - 0 ID=cds-PDP45085.1;Parent=gene-CLI86_00145;Dbxref=NCBI_GP:PDP45085.1;Name=PDP45085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_00145;product=T9SS C-terminal target domain-containing protein;protein_id=PDP45085.1;transl_table=11 NSLJ01000001.1 Genbank gene 33418 34245 . - . ID=gene-CLI86_00150;Name=CLI86_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00150 NSLJ01000001.1 GeneMarkS+ CDS 33418 34245 . - 0 ID=cds-PDP45086.1;Parent=gene-CLI86_00150;Dbxref=NCBI_GP:PDP45086.1;Name=PDP45086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00150;product=hypothetical protein;protein_id=PDP45086.1;transl_table=11 NSLJ01000001.1 Genbank gene 34432 35709 . + . ID=gene-CLI86_00155;Name=CLI86_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00155 NSLJ01000001.1 Protein Homology CDS 34432 35709 . + 0 ID=cds-PDP45087.1;Parent=gene-CLI86_00155;Dbxref=NCBI_GP:PDP45087.1;Name=PDP45087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225185.1;locus_tag=CLI86_00155;product=AAA family ATPase;protein_id=PDP45087.1;transl_table=11 NSLJ01000001.1 Genbank gene 35715 36191 . - . ID=gene-CLI86_00160;Name=CLI86_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00160 NSLJ01000001.1 Protein Homology CDS 35715 36191 . - 0 ID=cds-PDP45088.1;Parent=gene-CLI86_00160;Dbxref=NCBI_GP:PDP45088.1;Name=PDP45088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225184.1;locus_tag=CLI86_00160;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=PDP45088.1;transl_table=11 NSLJ01000001.1 Genbank gene 36219 37397 . - . ID=gene-CLI86_00165;Name=CLI86_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00165 NSLJ01000001.1 Protein Homology CDS 36219 37397 . - 0 ID=cds-PDP45089.1;Parent=gene-CLI86_00165;Dbxref=NCBI_GP:PDP45089.1;Name=PDP45089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842734.1;locus_tag=CLI86_00165;product=hypothetical protein;protein_id=PDP45089.1;transl_table=11 NSLJ01000001.1 Genbank gene 37569 37946 . - . ID=gene-CLI86_00170;Name=CLI86_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00170 NSLJ01000001.1 Protein Homology CDS 37569 37946 . - 0 ID=cds-PDP45090.1;Parent=gene-CLI86_00170;Dbxref=NCBI_GP:PDP45090.1;Name=PDP45090.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583512.1;locus_tag=CLI86_00170;product=RidA family protein;protein_id=PDP45090.1;transl_table=11 NSLJ01000001.1 Genbank gene 38056 39078 . + . ID=gene-CLI86_00175;Name=CLI86_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00175 NSLJ01000001.1 Protein Homology CDS 38056 39078 . + 0 ID=cds-PDP45091.1;Parent=gene-CLI86_00175;Dbxref=NCBI_GP:PDP45091.1;Name=PDP45091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225181.1;locus_tag=CLI86_00175;product=threonine-phosphate decarboxylase;protein_id=PDP45091.1;transl_table=11 NSLJ01000001.1 Genbank gene 39054 39998 . + . ID=gene-CLI86_00180;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CLI86_00180 NSLJ01000001.1 Protein Homology CDS 39054 39998 . + 0 ID=cds-PDP45092.1;Parent=gene-CLI86_00180;Dbxref=NCBI_GP:PDP45092.1;Name=PDP45092.1;gbkey=CDS;gene=cobD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225180.1;locus_tag=CLI86_00180;product=cobalamin biosynthesis protein CobD;protein_id=PDP45092.1;transl_table=11 NSLJ01000001.1 Genbank gene 39971 41467 . - . ID=gene-CLI86_00185;Name=CLI86_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00185 NSLJ01000001.1 Protein Homology CDS 39971 41467 . - 0 ID=cds-PDP45093.1;Parent=gene-CLI86_00185;Dbxref=NCBI_GP:PDP45093.1;Name=PDP45093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225179.1;locus_tag=CLI86_00185;product=cobyric acid synthase CobQ;protein_id=PDP45093.1;transl_table=11 NSLJ01000001.1 Genbank gene 41985 42683 . - . ID=gene-CLI86_00190;Name=CLI86_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00190 NSLJ01000001.1 Protein Homology CDS 41985 42683 . - 0 ID=cds-PDP45094.1;Parent=gene-CLI86_00190;Dbxref=NCBI_GP:PDP45094.1;Name=PDP45094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225176.1;locus_tag=CLI86_00190;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=PDP45094.1;transl_table=11 NSLJ01000001.1 Genbank gene 42680 43549 . - . ID=gene-CLI86_00195;Name=CLI86_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00195 NSLJ01000001.1 Protein Homology CDS 42680 43549 . - 0 ID=cds-PDP45095.1;Parent=gene-CLI86_00195;Dbxref=NCBI_GP:PDP45095.1;Name=PDP45095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859711.1;locus_tag=CLI86_00195;product=hypothetical protein;protein_id=PDP45095.1;transl_table=11 NSLJ01000001.1 Genbank gene 43568 44269 . - . ID=gene-CLI86_00200;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CLI86_00200 NSLJ01000001.1 Protein Homology CDS 43568 44269 . - 0 ID=cds-PDP45096.1;Parent=gene-CLI86_00200;Dbxref=NCBI_GP:PDP45096.1;Name=PDP45096.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225174.1;locus_tag=CLI86_00200;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=PDP45096.1;transl_table=11 NSLJ01000001.1 Genbank gene 44284 44922 . - . ID=gene-CLI86_00205;Name=CLI86_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00205 NSLJ01000001.1 GeneMarkS+ CDS 44284 44922 . - 0 ID=cds-PDP45097.1;Parent=gene-CLI86_00205;Dbxref=NCBI_GP:PDP45097.1;Name=PDP45097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00205;product=hypothetical protein;protein_id=PDP45097.1;transl_table=11 NSLJ01000001.1 Genbank gene 45405 46829 . - . ID=gene-CLI86_00210;Name=CLI86_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00210 NSLJ01000001.1 Protein Homology CDS 45405 46829 . - 0 ID=cds-PDP45098.1;Parent=gene-CLI86_00210;Dbxref=NCBI_GP:PDP45098.1;Name=PDP45098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225171.1;locus_tag=CLI86_00210;product=ATP-dependent endonuclease;protein_id=PDP45098.1;transl_table=11 NSLJ01000001.1 Genbank gene 46922 47608 . + . ID=gene-CLI86_00215;Name=CLI86_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00215 NSLJ01000001.1 Protein Homology CDS 46922 47608 . + 0 ID=cds-PDP45099.1;Parent=gene-CLI86_00215;Dbxref=NCBI_GP:PDP45099.1;Name=PDP45099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225170.1;locus_tag=CLI86_00215;product=hypothetical protein;protein_id=PDP45099.1;transl_table=11 NSLJ01000001.1 Genbank gene 47615 48427 . + . ID=gene-CLI86_00220;Name=CLI86_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00220 NSLJ01000001.1 Protein Homology CDS 47615 48427 . + 0 ID=cds-PDP45100.1;Parent=gene-CLI86_00220;Dbxref=NCBI_GP:PDP45100.1;Name=PDP45100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12864.5;locus_tag=CLI86_00220;product=DUF3822 domain-containing protein;protein_id=PDP45100.1;transl_table=11 NSLJ01000001.1 Genbank gene 48415 48972 . + . ID=gene-CLI86_00225;Name=CLI86_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00225 NSLJ01000001.1 Protein Homology CDS 48415 48972 . + 0 ID=cds-PDP45101.1;Parent=gene-CLI86_00225;Dbxref=NCBI_GP:PDP45101.1;Name=PDP45101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009276477.1;locus_tag=CLI86_00225;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=PDP45101.1;transl_table=11 NSLJ01000001.1 Genbank gene 48944 50377 . - . ID=gene-CLI86_00230;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CLI86_00230 NSLJ01000001.1 Protein Homology CDS 48944 50377 . - 0 ID=cds-PDP45206.1;Parent=gene-CLI86_00230;Dbxref=NCBI_GP:PDP45206.1;Name=PDP45206.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007484042.1;locus_tag=CLI86_00230;product=cardiolipin synthase;protein_id=PDP45206.1;transl_table=11 NSLJ01000001.1 Genbank gene 50483 51253 . + . ID=gene-CLI86_00235;Name=CLI86_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00235 NSLJ01000001.1 Protein Homology CDS 50483 51253 . + 0 ID=cds-PDP45102.1;Parent=gene-CLI86_00235;Dbxref=NCBI_GP:PDP45102.1;Name=PDP45102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225166.1;locus_tag=CLI86_00235;product=5'/3'-nucleotidase SurE;protein_id=PDP45102.1;transl_table=11 NSLJ01000001.1 Genbank gene 51260 52393 . + . ID=gene-CLI86_00240;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CLI86_00240 NSLJ01000001.1 Protein Homology CDS 51260 52393 . + 0 ID=cds-PDP45103.1;Parent=gene-CLI86_00240;Dbxref=NCBI_GP:PDP45103.1;Name=PDP45103.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225165.1;locus_tag=CLI86_00240;product=lipid-A-disaccharide synthase;protein_id=PDP45103.1;transl_table=11 NSLJ01000001.1 Genbank gene 52501 53703 . - . ID=gene-CLI86_00245;Name=CLI86_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00245 NSLJ01000001.1 Protein Homology CDS 52501 53703 . - 0 ID=cds-PDP45104.1;Parent=gene-CLI86_00245;Dbxref=NCBI_GP:PDP45104.1;Name=PDP45104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225164.1;locus_tag=CLI86_00245;product=dicarboxylate/amino acid:cation symporter;protein_id=PDP45104.1;transl_table=11 NSLJ01000001.1 Genbank gene 53769 55046 . - . ID=gene-CLI86_00250;Name=CLI86_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00250 NSLJ01000001.1 Protein Homology CDS 53769 55046 . - 0 ID=cds-PDP45105.1;Parent=gene-CLI86_00250;Dbxref=NCBI_GP:PDP45105.1;Name=PDP45105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12679.5;locus_tag=CLI86_00250;product=ABC transporter permease;protein_id=PDP45105.1;transl_table=11 NSLJ01000001.1 Genbank gene 55021 55782 . - . ID=gene-CLI86_00255;Name=CLI86_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00255 NSLJ01000001.1 Protein Homology CDS 55021 55782 . - 0 ID=cds-PDP45106.1;Parent=gene-CLI86_00255;Dbxref=NCBI_GP:PDP45106.1;Name=PDP45106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225162.1;locus_tag=CLI86_00255;product=ABC transporter ATP-binding protein;protein_id=PDP45106.1;transl_table=11 NSLJ01000001.1 Genbank gene 55779 56801 . - . ID=gene-CLI86_00260;Name=CLI86_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00260 NSLJ01000001.1 Protein Homology CDS 55779 56801 . - 0 ID=cds-PDP45107.1;Parent=gene-CLI86_00260;Dbxref=NCBI_GP:PDP45107.1;Name=PDP45107.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16169.3;locus_tag=CLI86_00260;product=peptidase;protein_id=PDP45107.1;transl_table=11 NSLJ01000001.1 Genbank gene 56798 57196 . - . ID=gene-CLI86_00265;Name=CLI86_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00265 NSLJ01000001.1 GeneMarkS+ CDS 56798 57196 . - 0 ID=cds-PDP45108.1;Parent=gene-CLI86_00265;Dbxref=NCBI_GP:PDP45108.1;Name=PDP45108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00265;product=hypothetical protein;protein_id=PDP45108.1;transl_table=11 NSLJ01000001.1 Genbank gene 57270 58547 . - . ID=gene-CLI86_00270;Name=CLI86_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00270 NSLJ01000001.1 Protein Homology CDS 57270 58547 . - 0 ID=cds-PDP45109.1;Parent=gene-CLI86_00270;Dbxref=NCBI_GP:PDP45109.1;Name=PDP45109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225159.1;locus_tag=CLI86_00270;product=radical SAM protein;protein_id=PDP45109.1;transl_table=11 NSLJ01000001.1 Genbank gene 58752 60056 . + . ID=gene-CLI86_00275;Name=CLI86_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00275 NSLJ01000001.1 Protein Homology CDS 58752 60056 . + 0 ID=cds-PDP45110.1;Parent=gene-CLI86_00275;Dbxref=NCBI_GP:PDP45110.1;Name=PDP45110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225155.1;locus_tag=CLI86_00275;product=MFS transporter;protein_id=PDP45110.1;transl_table=11 NSLJ01000001.1 Genbank gene 60630 62351 . - . ID=gene-CLI86_00280;Name=CLI86_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00280 NSLJ01000001.1 Protein Homology CDS 60630 62351 . - 0 ID=cds-PDP45111.1;Parent=gene-CLI86_00280;Dbxref=NCBI_GP:PDP45111.1;Name=PDP45111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005868025.1;locus_tag=CLI86_00280;product=serine protease;protein_id=PDP45111.1;transl_table=11 NSLJ01000001.1 Genbank gene 62613 63041 . + . ID=gene-CLI86_00285;Name=CLI86_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00285 NSLJ01000001.1 GeneMarkS+ CDS 62613 63041 . + 0 ID=cds-PDP45112.1;Parent=gene-CLI86_00285;Dbxref=NCBI_GP:PDP45112.1;Name=PDP45112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00285;product=hypothetical protein;protein_id=PDP45112.1;transl_table=11 NSLJ01000001.1 Genbank gene 63267 63716 . + . ID=gene-CLI86_00290;Name=CLI86_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00290 NSLJ01000001.1 Protein Homology CDS 63267 63716 . + 0 ID=cds-PDP45113.1;Parent=gene-CLI86_00290;Dbxref=NCBI_GP:PDP45113.1;Name=PDP45113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008774452.1;locus_tag=CLI86_00290;product=ArgR family transcriptional regulator;protein_id=PDP45113.1;transl_table=11 NSLJ01000001.1 Genbank gene 63713 64363 . + . ID=gene-CLI86_00295;Name=CLI86_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00295 NSLJ01000001.1 Protein Homology CDS 63713 64363 . + 0 ID=cds-PDP45114.1;Parent=gene-CLI86_00295;Dbxref=NCBI_GP:PDP45114.1;Name=PDP45114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225151.1;locus_tag=CLI86_00295;product=GNAT family N-acetyltransferase;protein_id=PDP45114.1;transl_table=11 NSLJ01000001.1 Genbank gene 64386 65633 . + . ID=gene-CLI86_00300;Name=CLI86_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00300 NSLJ01000001.1 Protein Homology CDS 64386 65633 . + 0 ID=cds-PDP45115.1;Parent=gene-CLI86_00300;Dbxref=NCBI_GP:PDP45115.1;Name=PDP45115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225150.1;locus_tag=CLI86_00300;product=argininosuccinate synthase;protein_id=PDP45115.1;transl_table=11 NSLJ01000001.1 Genbank gene 65630 66604 . + . ID=gene-CLI86_00305;Name=CLI86_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00305 NSLJ01000001.1 Protein Homology CDS 65630 66604 . + 0 ID=cds-PDP45116.1;Parent=gene-CLI86_00305;Dbxref=NCBI_GP:PDP45116.1;Name=PDP45116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225149.1;locus_tag=CLI86_00305;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=PDP45116.1;transl_table=11 NSLJ01000001.1 Genbank gene 66637 67770 . + . ID=gene-CLI86_00310;Name=CLI86_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00310 NSLJ01000001.1 Protein Homology CDS 66637 67770 . + 0 ID=cds-PDP45117.1;Parent=gene-CLI86_00310;Dbxref=NCBI_GP:PDP45117.1;Name=PDP45117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225148.1;locus_tag=CLI86_00310;product=aspartate aminotransferase family protein;protein_id=PDP45117.1;transl_table=11 NSLJ01000001.1 Genbank gene 69184 70080 . + . ID=gene-CLI86_00315;Name=CLI86_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00315 NSLJ01000001.1 Protein Homology CDS 69184 70080 . + 0 ID=cds-PDP45118.1;Parent=gene-CLI86_00315;Dbxref=NCBI_GP:PDP45118.1;Name=PDP45118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154282.1;locus_tag=CLI86_00315;product=diaminopimelate dehydrogenase;protein_id=PDP45118.1;transl_table=11 NSLJ01000001.1 Genbank gene 70162 71016 . + . ID=gene-CLI86_00320;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CLI86_00320 NSLJ01000001.1 Protein Homology CDS 70162 71016 . + 0 ID=cds-PDP45119.1;Parent=gene-CLI86_00320;Dbxref=NCBI_GP:PDP45119.1;Name=PDP45119.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225146.1;locus_tag=CLI86_00320;product=prolipoprotein diacylglyceryl transferase;protein_id=PDP45119.1;transl_table=11 NSLJ01000001.1 Genbank gene 71046 72224 . + . ID=gene-CLI86_00325;Name=CLI86_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00325 NSLJ01000001.1 Protein Homology CDS 71046 72224 . + 0 ID=cds-PDP45120.1;Parent=gene-CLI86_00325;Dbxref=NCBI_GP:PDP45120.1;Name=PDP45120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225145.1;locus_tag=CLI86_00325;product=FprA family A-type flavoprotein;protein_id=PDP45120.1;transl_table=11 NSLJ01000001.1 Genbank gene 72238 72783 . + . ID=gene-CLI86_00330;Name=CLI86_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00330 NSLJ01000001.1 GeneMarkS+ CDS 72238 72783 . + 0 ID=cds-PDP45121.1;Parent=gene-CLI86_00330;Dbxref=NCBI_GP:PDP45121.1;Name=PDP45121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00330;product=hypothetical protein;protein_id=PDP45121.1;transl_table=11 NSLJ01000001.1 Genbank gene 72805 73617 . + . ID=gene-CLI86_00335;Name=CLI86_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00335 NSLJ01000001.1 Protein Homology CDS 72805 73617 . + 0 ID=cds-PDP45122.1;Parent=gene-CLI86_00335;Dbxref=NCBI_GP:PDP45122.1;Name=PDP45122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655151.1;locus_tag=CLI86_00335;product=glucosamine-6-phosphate deaminase;protein_id=PDP45122.1;transl_table=11 NSLJ01000001.1 Genbank gene 73688 74926 . + . ID=gene-CLI86_00340;Name=CLI86_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00340 NSLJ01000001.1 Protein Homology CDS 73688 74926 . + 0 ID=cds-PDP45123.1;Parent=gene-CLI86_00340;Dbxref=NCBI_GP:PDP45123.1;Name=PDP45123.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14391.4;locus_tag=CLI86_00340;product=hypothetical protein;protein_id=PDP45123.1;transl_table=11 NSLJ01000001.1 Genbank gene 75114 75677 . + . ID=gene-CLI86_00345;Name=CLI86_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00345 NSLJ01000001.1 Protein Homology CDS 75114 75677 . + 0 ID=cds-PDP45207.1;Parent=gene-CLI86_00345;Dbxref=NCBI_GP:PDP45207.1;Name=PDP45207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538490.1;locus_tag=CLI86_00345;product=threonylcarbamoyl-AMP synthase;protein_id=PDP45207.1;transl_table=11 NSLJ01000001.1 Genbank gene 75677 77077 . + . ID=gene-CLI86_00350;Name=CLI86_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00350 NSLJ01000001.1 Protein Homology CDS 75677 77077 . + 0 ID=cds-PDP45124.1;Parent=gene-CLI86_00350;Dbxref=NCBI_GP:PDP45124.1;Name=PDP45124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866194.1;locus_tag=CLI86_00350;product=sugar transferase;protein_id=PDP45124.1;transl_table=11 NSLJ01000001.1 Genbank gene 77088 78872 . + . ID=gene-CLI86_00355;Name=CLI86_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00355 NSLJ01000001.1 Protein Homology CDS 77088 78872 . + 0 ID=cds-PDP45208.1;Parent=gene-CLI86_00355;Dbxref=NCBI_GP:PDP45208.1;Name=PDP45208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779521.1;locus_tag=CLI86_00355;product=chloride channel protein;protein_id=PDP45208.1;transl_table=11 NSLJ01000001.1 Genbank gene 78918 80156 . - . ID=gene-CLI86_00360;Name=CLI86_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00360 NSLJ01000001.1 Protein Homology CDS 78918 80156 . - 0 ID=cds-PDP45209.1;Parent=gene-CLI86_00360;Dbxref=NCBI_GP:PDP45209.1;Name=PDP45209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860615.1;locus_tag=CLI86_00360;product=peptidase M16;protein_id=PDP45209.1;transl_table=11 NSLJ01000001.1 Genbank gene 80285 81034 . + . ID=gene-CLI86_00365;Name=CLI86_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00365 NSLJ01000001.1 Protein Homology CDS 80285 81034 . + 0 ID=cds-PDP45125.1;Parent=gene-CLI86_00365;Dbxref=NCBI_GP:PDP45125.1;Name=PDP45125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12667.5;locus_tag=CLI86_00365;product=hypothetical protein;protein_id=PDP45125.1;transl_table=11 NSLJ01000001.1 Genbank gene 81134 82012 . - . ID=gene-CLI86_00370;Name=CLI86_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00370 NSLJ01000001.1 Protein Homology CDS 81134 82012 . - 0 ID=cds-PDP45126.1;Parent=gene-CLI86_00370;Dbxref=NCBI_GP:PDP45126.1;Name=PDP45126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634251.1;locus_tag=CLI86_00370;product=glycosyl hydrolase;protein_id=PDP45126.1;transl_table=11 NSLJ01000001.1 Genbank gene 82116 83597 . - . ID=gene-CLI86_00375;Name=CLI86_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00375 NSLJ01000001.1 Protein Homology CDS 82116 83597 . - 0 ID=cds-PDP45127.1;Parent=gene-CLI86_00375;Dbxref=NCBI_GP:PDP45127.1;Name=PDP45127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811071.1;locus_tag=CLI86_00375;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP45127.1;transl_table=11 NSLJ01000001.1 Genbank gene 83769 85664 . - . ID=gene-CLI86_00380;Name=CLI86_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00380 NSLJ01000001.1 Protein Homology CDS 83769 85664 . - 0 ID=cds-PDP45128.1;Parent=gene-CLI86_00380;Dbxref=NCBI_GP:PDP45128.1;Name=PDP45128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655107.1;locus_tag=CLI86_00380;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP45128.1;transl_table=11 NSLJ01000001.1 Genbank gene 85682 89221 . - . ID=gene-CLI86_00385;Name=CLI86_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00385 NSLJ01000001.1 Protein Homology CDS 85682 89221 . - 0 ID=cds-PDP45129.1;Parent=gene-CLI86_00385;Dbxref=NCBI_GP:PDP45129.1;Name=PDP45129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655108.1;locus_tag=CLI86_00385;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP45129.1;transl_table=11 NSLJ01000001.1 Genbank gene 89237 90361 . - . ID=gene-CLI86_00390;Name=CLI86_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00390 NSLJ01000001.1 Protein Homology CDS 89237 90361 . - 0 ID=cds-PDP45130.1;Parent=gene-CLI86_00390;Dbxref=NCBI_GP:PDP45130.1;Name=PDP45130.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16344.3;locus_tag=CLI86_00390;product=hypothetical protein;protein_id=PDP45130.1;transl_table=11 NSLJ01000001.1 Genbank gene 90531 91121 . - . ID=gene-CLI86_00395;Name=CLI86_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00395 NSLJ01000001.1 Protein Homology CDS 90531 91121 . - 0 ID=cds-PDP45131.1;Parent=gene-CLI86_00395;Dbxref=NCBI_GP:PDP45131.1;Name=PDP45131.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02985;locus_tag=CLI86_00395;product=RNA polymerase subunit sigma-70;protein_id=PDP45131.1;transl_table=11 NSLJ01000001.1 Genbank gene 91253 91486 . + . ID=gene-CLI86_00400;Name=CLI86_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00400 NSLJ01000001.1 Protein Homology CDS 91253 91486 . + 0 ID=cds-PDP45132.1;Parent=gene-CLI86_00400;Dbxref=NCBI_GP:PDP45132.1;Name=PDP45132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859856.1;locus_tag=CLI86_00400;product=DUF4492 domain-containing protein;protein_id=PDP45132.1;transl_table=11 NSLJ01000001.1 Genbank gene 91509 93059 . + . ID=gene-CLI86_00405;Name=CLI86_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00405 NSLJ01000001.1 Protein Homology CDS 91509 93059 . + 0 ID=cds-PDP45133.1;Parent=gene-CLI86_00405;Dbxref=NCBI_GP:PDP45133.1;Name=PDP45133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225128.1;locus_tag=CLI86_00405;product=cytochrome ubiquinol oxidase subunit I;protein_id=PDP45133.1;transl_table=11 NSLJ01000001.1 Genbank gene 93086 94240 . + . ID=gene-CLI86_00410;Name=CLI86_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00410 NSLJ01000001.1 Protein Homology CDS 93086 94240 . + 0 ID=cds-PDP45134.1;Parent=gene-CLI86_00410;Dbxref=NCBI_GP:PDP45134.1;Name=PDP45134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225127.1;locus_tag=CLI86_00410;product=cytochrome C oxidase assembly protein;protein_id=PDP45134.1;transl_table=11 NSLJ01000001.1 Genbank gene 94921 95568 . - . ID=gene-CLI86_00415;Name=CLI86_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00415 NSLJ01000001.1 Protein Homology CDS 94921 95568 . - 0 ID=cds-PDP45135.1;Parent=gene-CLI86_00415;Dbxref=NCBI_GP:PDP45135.1;Name=PDP45135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13545.4;locus_tag=CLI86_00415;product=Crp/Fnr family transcriptional regulator;protein_id=PDP45135.1;transl_table=11 NSLJ01000001.1 Genbank gene 95758 97848 . + . ID=gene-CLI86_00420;Name=CLI86_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00420 NSLJ01000001.1 Protein Homology CDS 95758 97848 . + 0 ID=cds-PDP45136.1;Parent=gene-CLI86_00420;Dbxref=NCBI_GP:PDP45136.1;Name=PDP45136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225123.1;locus_tag=CLI86_00420;product=KamA family protein;protein_id=PDP45136.1;transl_table=11 NSLJ01000001.1 Genbank gene 97984 98253 . - . ID=gene-CLI86_00425;Name=CLI86_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00425 NSLJ01000001.1 Protein Homology CDS 97984 98253 . - 0 ID=cds-PDP45137.1;Parent=gene-CLI86_00425;Dbxref=NCBI_GP:PDP45137.1;Name=PDP45137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007763600.1;locus_tag=CLI86_00425;product=30S ribosomal protein S15;protein_id=PDP45137.1;transl_table=11 NSLJ01000001.1 Genbank gene 98403 100211 . + . ID=gene-CLI86_00430;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CLI86_00430 NSLJ01000001.1 Protein Homology CDS 98403 100211 . + 0 ID=cds-PDP45138.1;Parent=gene-CLI86_00430;Dbxref=NCBI_GP:PDP45138.1;Name=PDP45138.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225121.1;locus_tag=CLI86_00430;product=translational GTPase TypA;protein_id=PDP45138.1;transl_table=11 NSLJ01000001.1 Genbank gene 100466 102112 . + . ID=gene-CLI86_00435;Name=CLI86_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00435 NSLJ01000001.1 Protein Homology CDS 100466 102112 . + 0 ID=cds-PDP45210.1;Parent=gene-CLI86_00435;Dbxref=NCBI_GP:PDP45210.1;Name=PDP45210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225119.1;locus_tag=CLI86_00435;product=hydroxylamine reductase;protein_id=PDP45210.1;transl_table=11 NSLJ01000001.1 Genbank gene 102218 103075 . - . ID=gene-CLI86_00440;Name=CLI86_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00440 NSLJ01000001.1 Protein Homology CDS 102218 103075 . - 0 ID=cds-PDP45139.1;Parent=gene-CLI86_00440;Dbxref=NCBI_GP:PDP45139.1;Name=PDP45139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813099.1;locus_tag=CLI86_00440;product=enoyl-ACP reductase;protein_id=PDP45139.1;transl_table=11 NSLJ01000001.1 Genbank gene 103324 105129 . - . ID=gene-CLI86_00445;Name=CLI86_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00445 NSLJ01000001.1 Protein Homology CDS 103324 105129 . - 0 ID=cds-PDP45140.1;Parent=gene-CLI86_00445;Dbxref=NCBI_GP:PDP45140.1;Name=PDP45140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225116.1;locus_tag=CLI86_00445;product=30S ribosomal protein S1;protein_id=PDP45140.1;transl_table=11 NSLJ01000001.1 Genbank gene 105279 105650 . - . ID=gene-CLI86_00450;Name=CLI86_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00450 NSLJ01000001.1 GeneMarkS+ CDS 105279 105650 . - 0 ID=cds-PDP45141.1;Parent=gene-CLI86_00450;Dbxref=NCBI_GP:PDP45141.1;Name=PDP45141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00450;product=hypothetical protein;protein_id=PDP45141.1;transl_table=11 NSLJ01000001.1 Genbank gene 105664 106209 . - . ID=gene-CLI86_00455;Name=CLI86_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00455 NSLJ01000001.1 Protein Homology CDS 105664 106209 . - 0 ID=cds-PDP45211.1;Parent=gene-CLI86_00455;Dbxref=NCBI_GP:PDP45211.1;Name=PDP45211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156663.1;locus_tag=CLI86_00455;product=RNA polymerase sigma factor;protein_id=PDP45211.1;transl_table=11 NSLJ01000001.1 Genbank gene 106284 107465 . - . ID=gene-CLI86_00460;Name=CLI86_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00460 NSLJ01000001.1 Protein Homology CDS 106284 107465 . - 0 ID=cds-PDP45142.1;Parent=gene-CLI86_00460;Dbxref=NCBI_GP:PDP45142.1;Name=PDP45142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225113.1;locus_tag=CLI86_00460;product=cystathionine beta-lyase;protein_id=PDP45142.1;transl_table=11 NSLJ01000001.1 Genbank gene 107589 108224 . + . ID=gene-CLI86_00465;Name=CLI86_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00465 NSLJ01000001.1 GeneMarkS+ CDS 107589 108224 . + 0 ID=cds-PDP45143.1;Parent=gene-CLI86_00465;Dbxref=NCBI_GP:PDP45143.1;Name=PDP45143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00465;product=hypothetical protein;protein_id=PDP45143.1;transl_table=11 NSLJ01000001.1 Genbank gene 108225 108986 . - . ID=gene-CLI86_00470;Name=CLI86_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00470 NSLJ01000001.1 Protein Homology CDS 108225 108986 . - 0 ID=cds-PDP45212.1;Parent=gene-CLI86_00470;Dbxref=NCBI_GP:PDP45212.1;Name=PDP45212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225110.1;locus_tag=CLI86_00470;product=PorT family protein;protein_id=PDP45212.1;transl_table=11 NSLJ01000001.1 Genbank gene 109055 109402 . - . ID=gene-CLI86_00475;Name=CLI86_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00475 NSLJ01000001.1 GeneMarkS+ CDS 109055 109402 . - 0 ID=cds-PDP45144.1;Parent=gene-CLI86_00475;Dbxref=NCBI_GP:PDP45144.1;Name=PDP45144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00475;product=hypothetical protein;protein_id=PDP45144.1;transl_table=11 NSLJ01000001.1 Genbank gene 109649 110899 . - . ID=gene-CLI86_00480;Name=CLI86_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00480 NSLJ01000001.1 Protein Homology CDS 109649 110899 . - 0 ID=cds-PDP45145.1;Parent=gene-CLI86_00480;Dbxref=NCBI_GP:PDP45145.1;Name=PDP45145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225108.1;locus_tag=CLI86_00480;product=glucose/galactose MFS transporter;protein_id=PDP45145.1;transl_table=11 NSLJ01000001.1 Genbank gene 111333 113684 . + . ID=gene-CLI86_00485;Name=CLI86_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00485 NSLJ01000001.1 Protein Homology CDS 111333 113684 . + 0 ID=cds-PDP45146.1;Parent=gene-CLI86_00485;Dbxref=NCBI_GP:PDP45146.1;Name=PDP45146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07715.13;locus_tag=CLI86_00485;product=TonB-dependent receptor;protein_id=PDP45146.1;transl_table=11 NSLJ01000001.1 Genbank gene 114226 115839 . + . ID=gene-CLI86_00490;Name=CLI86_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00490 NSLJ01000001.1 Protein Homology CDS 114226 115839 . + 0 ID=cds-PDP45147.1;Parent=gene-CLI86_00490;Dbxref=NCBI_GP:PDP45147.1;Name=PDP45147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842009.1;locus_tag=CLI86_00490;product=hypothetical protein;protein_id=PDP45147.1;transl_table=11 NSLJ01000001.1 Genbank gene 115862 116341 . - . ID=gene-CLI86_00495;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CLI86_00495 NSLJ01000001.1 Protein Homology CDS 115862 116341 . - 0 ID=cds-PDP45148.1;Parent=gene-CLI86_00495;Dbxref=NCBI_GP:PDP45148.1;Name=PDP45148.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225103.1;locus_tag=CLI86_00495;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=PDP45148.1;transl_table=11 NSLJ01000001.1 Genbank gene 116338 117387 . - . ID=gene-CLI86_00500;Name=CLI86_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00500 NSLJ01000001.1 Protein Homology CDS 116338 117387 . - 0 ID=cds-PDP45149.1;Parent=gene-CLI86_00500;Dbxref=NCBI_GP:PDP45149.1;Name=PDP45149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150013.1;locus_tag=CLI86_00500;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=PDP45149.1;transl_table=11 NSLJ01000001.1 Genbank gene 117384 118121 . - . ID=gene-CLI86_00505;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CLI86_00505 NSLJ01000001.1 Protein Homology CDS 117384 118121 . - 0 ID=cds-PDP45150.1;Parent=gene-CLI86_00505;Dbxref=NCBI_GP:PDP45150.1;Name=PDP45150.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225101.1;locus_tag=CLI86_00505;product=tRNA pseudouridine(55) synthase TruB;protein_id=PDP45150.1;transl_table=11 NSLJ01000001.1 Genbank gene 118133 118945 . - . ID=gene-CLI86_00510;Name=CLI86_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00510 NSLJ01000001.1 Protein Homology CDS 118133 118945 . - 0 ID=cds-PDP45151.1;Parent=gene-CLI86_00510;Dbxref=NCBI_GP:PDP45151.1;Name=PDP45151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225100.1;locus_tag=CLI86_00510;product=undecaprenyl-diphosphate phosphatase;protein_id=PDP45151.1;transl_table=11 NSLJ01000001.1 Genbank gene 118942 119196 . - . ID=gene-CLI86_00515;Name=CLI86_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00515 NSLJ01000001.1 Protein Homology CDS 118942 119196 . - 0 ID=cds-PDP45152.1;Parent=gene-CLI86_00515;Dbxref=NCBI_GP:PDP45152.1;Name=PDP45152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225099.1;locus_tag=CLI86_00515;product=DUF3098 domain-containing protein;protein_id=PDP45152.1;transl_table=11 NSLJ01000001.1 Genbank gene 119221 120099 . - . ID=gene-CLI86_00520;Name=CLI86_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00520 NSLJ01000001.1 Protein Homology CDS 119221 120099 . - 0 ID=cds-PDP45153.1;Parent=gene-CLI86_00520;Dbxref=NCBI_GP:PDP45153.1;Name=PDP45153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150016.1;locus_tag=CLI86_00520;product=ABC transporter permease;protein_id=PDP45153.1;transl_table=11 NSLJ01000001.1 Genbank gene 120412 121428 . - . ID=gene-CLI86_00525;Name=CLI86_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00525 NSLJ01000001.1 Protein Homology CDS 120412 121428 . - 0 ID=cds-PDP45154.1;Parent=gene-CLI86_00525;Dbxref=NCBI_GP:PDP45154.1;Name=PDP45154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639939.1;locus_tag=CLI86_00525;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=PDP45154.1;transl_table=11 NSLJ01000001.1 Genbank gene 121430 123289 . - . ID=gene-CLI86_00530;Name=CLI86_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00530 NSLJ01000001.1 Protein Homology CDS 121430 123289 . - 0 ID=cds-PDP45155.1;Parent=gene-CLI86_00530;Dbxref=NCBI_GP:PDP45155.1;Name=PDP45155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458348.1;locus_tag=CLI86_00530;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=PDP45155.1;transl_table=11 NSLJ01000001.1 Genbank gene 123349 123885 . - . ID=gene-CLI86_00535;Name=CLI86_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00535 NSLJ01000001.1 Protein Homology CDS 123349 123885 . - 0 ID=cds-PDP45156.1;Parent=gene-CLI86_00535;Dbxref=NCBI_GP:PDP45156.1;Name=PDP45156.1;Note=catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225095.1;locus_tag=CLI86_00535;product=shikimate kinase;protein_id=PDP45156.1;transl_table=11 NSLJ01000001.1 Genbank gene 124121 125872 . - . ID=gene-CLI86_00540;Name=CLI86_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00540 NSLJ01000001.1 Protein Homology CDS 124121 125872 . - 0 ID=cds-PDP45157.1;Parent=gene-CLI86_00540;Dbxref=NCBI_GP:PDP45157.1;Name=PDP45157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225093.1;locus_tag=CLI86_00540;product=peptidase S8;protein_id=PDP45157.1;transl_table=11 NSLJ01000001.1 Genbank gene 125869 126732 . - . ID=gene-CLI86_00545;Name=CLI86_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00545 NSLJ01000001.1 Protein Homology CDS 125869 126732 . - 0 ID=cds-PDP45213.1;Parent=gene-CLI86_00545;Dbxref=NCBI_GP:PDP45213.1;Name=PDP45213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225092.1;locus_tag=CLI86_00545;product=hypothetical protein;protein_id=PDP45213.1;transl_table=11 NSLJ01000001.1 Genbank gene 126992 129436 . + . ID=gene-CLI86_00550;Name=CLI86_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00550 NSLJ01000001.1 Protein Homology CDS 126992 129436 . + 0 ID=cds-PDP45158.1;Parent=gene-CLI86_00550;Dbxref=NCBI_GP:PDP45158.1;Name=PDP45158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009121697.1;locus_tag=CLI86_00550;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=PDP45158.1;transl_table=11 NSLJ01000001.1 Genbank gene 129452 129652 . + . ID=gene-CLI86_00555;Name=CLI86_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00555 NSLJ01000001.1 Protein Homology CDS 129452 129652 . + 0 ID=cds-PDP45159.1;Parent=gene-CLI86_00555;Dbxref=NCBI_GP:PDP45159.1;Name=PDP45159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225090.1;locus_tag=CLI86_00555;product=hypothetical protein;protein_id=PDP45159.1;transl_table=11 NSLJ01000001.1 Genbank gene 129661 130119 . + . ID=gene-CLI86_00560;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CLI86_00560 NSLJ01000001.1 Protein Homology CDS 129661 130119 . + 0 ID=cds-PDP45160.1;Parent=gene-CLI86_00560;Dbxref=NCBI_GP:PDP45160.1;Name=PDP45160.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015547515.1;locus_tag=CLI86_00560;product=thioredoxin;protein_id=PDP45160.1;transl_table=11 NSLJ01000001.1 Genbank gene 130137 130490 . + . ID=gene-CLI86_00565;Name=CLI86_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00565 NSLJ01000001.1 Protein Homology CDS 130137 130490 . + 0 ID=cds-PDP45214.1;Parent=gene-CLI86_00565;Dbxref=NCBI_GP:PDP45214.1;Name=PDP45214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007834563.1;locus_tag=CLI86_00565;product=MarR family transcriptional regulator;protein_id=PDP45214.1;transl_table=11 NSLJ01000001.1 Genbank gene 130732 131940 . + . ID=gene-CLI86_00570;Name=CLI86_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00570 NSLJ01000001.1 Protein Homology CDS 130732 131940 . + 0 ID=cds-PDP45161.1;Parent=gene-CLI86_00570;Dbxref=NCBI_GP:PDP45161.1;Name=PDP45161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225086.1;locus_tag=CLI86_00570;product=ROK family transcriptional regulator;protein_id=PDP45161.1;transl_table=11 NSLJ01000001.1 Genbank gene 132112 133110 . - . ID=gene-CLI86_00575;Name=CLI86_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00575 NSLJ01000001.1 GeneMarkS+ CDS 132112 133110 . - 0 ID=cds-PDP45162.1;Parent=gene-CLI86_00575;Dbxref=NCBI_GP:PDP45162.1;Name=PDP45162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00575;product=hypothetical protein;protein_id=PDP45162.1;transl_table=11 NSLJ01000001.1 Genbank pseudogene 133247 133453 . - . ID=gene-CLI86_00580;Name=CLI86_00580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_00580;pseudo=true NSLJ01000001.1 Protein Homology CDS 133247 133453 . - 0 ID=cds-CLI86_00580;Parent=gene-CLI86_00580;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010535963.1;locus_tag=CLI86_00580;product=cell filamentation protein Fic;pseudo=true;transl_table=11 NSLJ01000001.1 Genbank gene 133537 134532 . - . ID=gene-CLI86_00585;Name=CLI86_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00585 NSLJ01000001.1 Protein Homology CDS 133537 134532 . - 0 ID=cds-PDP45163.1;Parent=gene-CLI86_00585;Dbxref=NCBI_GP:PDP45163.1;Name=PDP45163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225084.1;locus_tag=CLI86_00585;product=DUF288 domain-containing protein;protein_id=PDP45163.1;transl_table=11 NSLJ01000001.1 Genbank gene 134529 134720 . - . ID=gene-CLI86_00590;Name=CLI86_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00590 NSLJ01000001.1 GeneMarkS+ CDS 134529 134720 . - 0 ID=cds-PDP45164.1;Parent=gene-CLI86_00590;Dbxref=NCBI_GP:PDP45164.1;Name=PDP45164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00590;product=hypothetical protein;protein_id=PDP45164.1;transl_table=11 NSLJ01000001.1 Genbank gene 134775 134963 . - . ID=gene-CLI86_00595;Name=CLI86_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00595 NSLJ01000001.1 GeneMarkS+ CDS 134775 134963 . - 0 ID=cds-PDP45165.1;Parent=gene-CLI86_00595;Dbxref=NCBI_GP:PDP45165.1;Name=PDP45165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00595;product=hypothetical protein;protein_id=PDP45165.1;transl_table=11 NSLJ01000001.1 Genbank gene 135134 137962 . - . ID=gene-CLI86_00600;Name=CLI86_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00600 NSLJ01000001.1 Protein Homology CDS 135134 137962 . - 0 ID=cds-PDP45166.1;Parent=gene-CLI86_00600;Dbxref=NCBI_GP:PDP45166.1;Name=PDP45166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00675.18%2CHMM:PF05193.19;locus_tag=CLI86_00600;product=peptidase M16;protein_id=PDP45166.1;transl_table=11 NSLJ01000001.1 Genbank gene 138072 138725 . - . ID=gene-CLI86_00605;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CLI86_00605 NSLJ01000001.1 Protein Homology CDS 138072 138725 . - 0 ID=cds-PDP45167.1;Parent=gene-CLI86_00605;Dbxref=NCBI_GP:PDP45167.1;Name=PDP45167.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225080.1;locus_tag=CLI86_00605;product=endonuclease III;protein_id=PDP45167.1;transl_table=11 NSLJ01000001.1 Genbank gene 138768 139790 . - . ID=gene-CLI86_00610;Name=CLI86_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00610 NSLJ01000001.1 Protein Homology CDS 138768 139790 . - 0 ID=cds-PDP45168.1;Parent=gene-CLI86_00610;Dbxref=NCBI_GP:PDP45168.1;Name=PDP45168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225079.1;locus_tag=CLI86_00610;product=phenylalanine--tRNA ligase subunit alpha;protein_id=PDP45168.1;transl_table=11 NSLJ01000001.1 Genbank gene 139869 141077 . + . ID=gene-CLI86_00615;Name=CLI86_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00615 NSLJ01000001.1 Protein Homology CDS 139869 141077 . + 0 ID=cds-PDP45169.1;Parent=gene-CLI86_00615;Dbxref=NCBI_GP:PDP45169.1;Name=PDP45169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225078.1;locus_tag=CLI86_00615;product=L-serine ammonia-lyase;protein_id=PDP45169.1;transl_table=11 NSLJ01000001.1 Genbank gene 141068 142339 . + . ID=gene-CLI86_00620;Name=CLI86_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00620 NSLJ01000001.1 Protein Homology CDS 141068 142339 . + 0 ID=cds-PDP45170.1;Parent=gene-CLI86_00620;Dbxref=NCBI_GP:PDP45170.1;Name=PDP45170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225077.1;locus_tag=CLI86_00620;product=HlyC/CorC family transporter;protein_id=PDP45170.1;transl_table=11 NSLJ01000001.1 Genbank gene 142486 145050 . + . ID=gene-CLI86_00625;Name=CLI86_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00625 NSLJ01000001.1 Protein Homology CDS 142486 145050 . + 0 ID=cds-PDP45171.1;Parent=gene-CLI86_00625;Dbxref=NCBI_GP:PDP45171.1;Name=PDP45171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225076.1;locus_tag=CLI86_00625;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=PDP45171.1;transl_table=11 NSLJ01000001.1 Genbank gene 145170 147230 . + . ID=gene-CLI86_00630;Name=CLI86_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00630 NSLJ01000001.1 Protein Homology CDS 145170 147230 . + 0 ID=cds-PDP45172.1;Parent=gene-CLI86_00630;Dbxref=NCBI_GP:PDP45172.1;Name=PDP45172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225075.1;locus_tag=CLI86_00630;product=molecular chaperone HtpG;protein_id=PDP45172.1;transl_table=11 NSLJ01000001.1 Genbank gene 147337 147516 . - . ID=gene-CLI86_00635;Name=CLI86_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00635 NSLJ01000001.1 GeneMarkS+ CDS 147337 147516 . - 0 ID=cds-PDP45173.1;Parent=gene-CLI86_00635;Dbxref=NCBI_GP:PDP45173.1;Name=PDP45173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00635;product=hypothetical protein;protein_id=PDP45173.1;transl_table=11 NSLJ01000001.1 Genbank gene 147799 148776 . + . ID=gene-CLI86_00640;Name=CLI86_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00640 NSLJ01000001.1 Protein Homology CDS 147799 148776 . + 0 ID=cds-PDP45174.1;Parent=gene-CLI86_00640;Dbxref=NCBI_GP:PDP45174.1;Name=PDP45174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643782.1;locus_tag=CLI86_00640;product=methionyl-tRNA formyltransferase;protein_id=PDP45174.1;transl_table=11 NSLJ01000001.1 Genbank gene 148828 149316 . + . ID=gene-CLI86_00645;Name=CLI86_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00645 NSLJ01000001.1 Protein Homology CDS 148828 149316 . + 0 ID=cds-PDP45175.1;Parent=gene-CLI86_00645;Dbxref=NCBI_GP:PDP45175.1;Name=PDP45175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225071.1;locus_tag=CLI86_00645;product=DUF456 domain-containing protein;protein_id=PDP45175.1;transl_table=11 NSLJ01000001.1 Genbank gene 149547 151271 . + . ID=gene-CLI86_00650;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CLI86_00650 NSLJ01000001.1 Protein Homology CDS 149547 151271 . + 0 ID=cds-PDP45176.1;Parent=gene-CLI86_00650;Dbxref=NCBI_GP:PDP45176.1;Name=PDP45176.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866190.1;locus_tag=CLI86_00650;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=PDP45176.1;transl_table=11 NSLJ01000001.1 Genbank gene 151278 153191 . + . ID=gene-CLI86_00655;Name=CLI86_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00655 NSLJ01000001.1 Protein Homology CDS 151278 153191 . + 0 ID=cds-PDP45177.1;Parent=gene-CLI86_00655;Dbxref=NCBI_GP:PDP45177.1;Name=PDP45177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225068.1;locus_tag=CLI86_00655;product=RecQ family ATP-dependent DNA helicase;protein_id=PDP45177.1;transl_table=11 NSLJ01000001.1 Genbank gene 153175 154374 . - . ID=gene-CLI86_00660;Name=CLI86_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00660 NSLJ01000001.1 Protein Homology CDS 153175 154374 . - 0 ID=cds-PDP45178.1;Parent=gene-CLI86_00660;Dbxref=NCBI_GP:PDP45178.1;Name=PDP45178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005868151.1;locus_tag=CLI86_00660;product=SAM-dependent methyltransferase;protein_id=PDP45178.1;transl_table=11 NSLJ01000001.1 Genbank gene 154492 154947 . + . ID=gene-CLI86_00665;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CLI86_00665 NSLJ01000001.1 Protein Homology CDS 154492 154947 . + 0 ID=cds-PDP45179.1;Parent=gene-CLI86_00665;Dbxref=NCBI_GP:PDP45179.1;Name=PDP45179.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225065.1;locus_tag=CLI86_00665;product=thioredoxin;protein_id=PDP45179.1;transl_table=11 NSLJ01000001.1 Genbank gene 155064 155654 . - . ID=gene-CLI86_00670;Name=CLI86_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00670 NSLJ01000001.1 Protein Homology CDS 155064 155654 . - 0 ID=cds-PDP45215.1;Parent=gene-CLI86_00670;Dbxref=NCBI_GP:PDP45215.1;Name=PDP45215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005468242.1;locus_tag=CLI86_00670;product=30S ribosomal protein S16;protein_id=PDP45215.1;transl_table=11 NSLJ01000001.1 Genbank gene 155853 156677 . + . ID=gene-CLI86_00675;Name=CLI86_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00675 NSLJ01000001.1 Protein Homology CDS 155853 156677 . + 0 ID=cds-PDP45216.1;Parent=gene-CLI86_00675;Dbxref=NCBI_GP:PDP45216.1;Name=PDP45216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634890.1;locus_tag=CLI86_00675;product=hypothetical protein;protein_id=PDP45216.1;transl_table=11 NSLJ01000001.1 Genbank gene 156690 157151 . - . ID=gene-CLI86_00680;Name=CLI86_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00680 NSLJ01000001.1 Protein Homology CDS 156690 157151 . - 0 ID=cds-PDP45217.1;Parent=gene-CLI86_00680;Dbxref=NCBI_GP:PDP45217.1;Name=PDP45217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019540455.1;locus_tag=CLI86_00680;product=methylglyoxal synthase;protein_id=PDP45217.1;transl_table=11 NSLJ01000001.1 Genbank gene 157219 158127 . - . ID=gene-CLI86_00685;Name=CLI86_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00685 NSLJ01000001.1 GeneMarkS+ CDS 157219 158127 . - 0 ID=cds-PDP45180.1;Parent=gene-CLI86_00685;Dbxref=NCBI_GP:PDP45180.1;Name=PDP45180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00685;product=hypothetical protein;protein_id=PDP45180.1;transl_table=11 NSLJ01000001.1 Genbank gene 158409 159008 . - . ID=gene-CLI86_00690;Name=CLI86_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00690 NSLJ01000001.1 Protein Homology CDS 158409 159008 . - 0 ID=cds-PDP45181.1;Parent=gene-CLI86_00690;Dbxref=NCBI_GP:PDP45181.1;Name=PDP45181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13505.4;locus_tag=CLI86_00690;product=PorT family protein;protein_id=PDP45181.1;transl_table=11 NSLJ01000001.1 Genbank gene 159177 162962 . + . ID=gene-CLI86_00695;Name=CLI86_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00695 NSLJ01000001.1 Protein Homology CDS 159177 162962 . + 0 ID=cds-PDP45182.1;Parent=gene-CLI86_00695;Dbxref=NCBI_GP:PDP45182.1;Name=PDP45182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225059.1;locus_tag=CLI86_00695;product=DNA polymerase III subunit alpha;protein_id=PDP45182.1;transl_table=11 NSLJ01000001.1 Genbank gene 162992 163306 . + . ID=gene-CLI86_00700;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CLI86_00700 NSLJ01000001.1 Protein Homology CDS 162992 163306 . + 0 ID=cds-PDP45183.1;Parent=gene-CLI86_00700;Dbxref=NCBI_GP:PDP45183.1;Name=PDP45183.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655346.1;locus_tag=CLI86_00700;product=thioredoxin;protein_id=PDP45183.1;transl_table=11 NSLJ01000001.1 Genbank gene 163464 163877 . + . ID=gene-CLI86_00705;Name=CLI86_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00705 NSLJ01000001.1 Protein Homology CDS 163464 163877 . + 0 ID=cds-PDP45184.1;Parent=gene-CLI86_00705;Dbxref=NCBI_GP:PDP45184.1;Name=PDP45184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225057.1;locus_tag=CLI86_00705;product=transcriptional repressor;protein_id=PDP45184.1;transl_table=11 NSLJ01000001.1 Genbank gene 164201 165343 . - . ID=gene-CLI86_00710;Name=CLI86_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00710 NSLJ01000001.1 Protein Homology CDS 164201 165343 . - 0 ID=cds-PDP45185.1;Parent=gene-CLI86_00710;Dbxref=NCBI_GP:PDP45185.1;Name=PDP45185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225056.1;locus_tag=CLI86_00710;product=AhpC/TSA family antioxidant protein;protein_id=PDP45185.1;transl_table=11 NSLJ01000001.1 Genbank gene 165367 166854 . - . ID=gene-CLI86_00715;Name=CLI86_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00715 NSLJ01000001.1 Protein Homology CDS 165367 166854 . - 0 ID=cds-PDP45186.1;Parent=gene-CLI86_00715;Dbxref=NCBI_GP:PDP45186.1;Name=PDP45186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9;locus_tag=CLI86_00715;product=hypothetical protein;protein_id=PDP45186.1;transl_table=11 NSLJ01000001.1 Genbank gene 166890 170459 . - . ID=gene-CLI86_00720;Name=CLI86_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00720 NSLJ01000001.1 Protein Homology CDS 166890 170459 . - 0 ID=cds-PDP45187.1;Parent=gene-CLI86_00720;Dbxref=NCBI_GP:PDP45187.1;Name=PDP45187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_00720;product=hypothetical protein;protein_id=PDP45187.1;transl_table=11 NSLJ01000001.1 Genbank gene 170610 172334 . - . ID=gene-CLI86_00725;Name=CLI86_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00725 NSLJ01000001.1 Protein Homology CDS 170610 172334 . - 0 ID=cds-PDP45218.1;Parent=gene-CLI86_00725;Dbxref=NCBI_GP:PDP45218.1;Name=PDP45218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005941125.1;locus_tag=CLI86_00725;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP45218.1;transl_table=11 NSLJ01000001.1 Genbank gene 172370 175612 . - . ID=gene-CLI86_00730;Name=CLI86_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00730 NSLJ01000001.1 Protein Homology CDS 172370 175612 . - 0 ID=cds-PDP45219.1;Parent=gene-CLI86_00730;Dbxref=NCBI_GP:PDP45219.1;Name=PDP45219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225053.1;locus_tag=CLI86_00730;product=TonB-dependent receptor;protein_id=PDP45219.1;transl_table=11 NSLJ01000001.1 Genbank gene 175697 176875 . - . ID=gene-CLI86_00735;Name=CLI86_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00735 NSLJ01000001.1 Protein Homology CDS 175697 176875 . - 0 ID=cds-PDP45188.1;Parent=gene-CLI86_00735;Dbxref=NCBI_GP:PDP45188.1;Name=PDP45188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16344.3;locus_tag=CLI86_00735;product=anti-sigma factor;protein_id=PDP45188.1;transl_table=11 NSLJ01000001.1 Genbank gene 177017 177088 . + . ID=gene-CLI86_00740;Name=CLI86_00740;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_00740 NSLJ01000001.1 tRNAscan-SE tRNA 177017 177088 . + . ID=rna-CLI86_00740;Parent=gene-CLI86_00740;anticodon=(pos:177050..177052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00740;product=tRNA-Glu NSLJ01000001.1 tRNAscan-SE exon 177017 177088 . + . ID=exon-CLI86_00740-1;Parent=rna-CLI86_00740;anticodon=(pos:177050..177052);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00740;product=tRNA-Glu NSLJ01000001.1 Genbank gene 177128 177382 . + . ID=gene-CLI86_00745;Name=CLI86_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00745 NSLJ01000001.1 Protein Homology CDS 177128 177382 . + 0 ID=cds-PDP45189.1;Parent=gene-CLI86_00745;Dbxref=NCBI_GP:PDP45189.1;Name=PDP45189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812342.1;locus_tag=CLI86_00745;product=30S ribosomal protein S20;protein_id=PDP45189.1;transl_table=11 NSLJ01000001.1 Genbank gene 177454 177528 . + . ID=gene-CLI86_00750;Name=CLI86_00750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_00750 NSLJ01000001.1 tRNAscan-SE tRNA 177454 177528 . + . ID=rna-CLI86_00750;Parent=gene-CLI86_00750;anticodon=(pos:177487..177489);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00750;product=tRNA-Glu NSLJ01000001.1 tRNAscan-SE exon 177454 177528 . + . ID=exon-CLI86_00750-1;Parent=rna-CLI86_00750;anticodon=(pos:177487..177489);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00750;product=tRNA-Glu NSLJ01000001.1 Genbank gene 177614 178057 . + . ID=gene-CLI86_00755;Name=CLI86_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00755 NSLJ01000001.1 GeneMarkS+ CDS 177614 178057 . + 0 ID=cds-PDP45190.1;Parent=gene-CLI86_00755;Dbxref=NCBI_GP:PDP45190.1;Name=PDP45190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00755;product=hypothetical protein;protein_id=PDP45190.1;transl_table=11 NSLJ01000001.1 Genbank gene 178054 178614 . + . ID=gene-CLI86_00760;Name=CLI86_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00760 NSLJ01000001.1 Protein Homology CDS 178054 178614 . + 0 ID=cds-PDP45191.1;Parent=gene-CLI86_00760;Dbxref=NCBI_GP:PDP45191.1;Name=PDP45191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008769095.1;locus_tag=CLI86_00760;product=hypothetical protein;protein_id=PDP45191.1;transl_table=11 NSLJ01000001.1 Genbank gene 178774 180522 . + . ID=gene-CLI86_00765;Name=CLI86_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00765 NSLJ01000001.1 Protein Homology CDS 178774 180522 . + 0 ID=cds-PDP45192.1;Parent=gene-CLI86_00765;Dbxref=NCBI_GP:PDP45192.1;Name=PDP45192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05139.12;locus_tag=CLI86_00765;product=hypothetical protein;protein_id=PDP45192.1;transl_table=11 NSLJ01000001.1 Genbank gene 180736 180936 . + . ID=gene-CLI86_00770;Name=CLI86_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00770 NSLJ01000001.1 GeneMarkS+ CDS 180736 180936 . + 0 ID=cds-PDP45193.1;Parent=gene-CLI86_00770;Dbxref=NCBI_GP:PDP45193.1;Name=PDP45193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00770;product=hypothetical protein;protein_id=PDP45193.1;transl_table=11 NSLJ01000001.1 Genbank gene 180936 181313 . + . ID=gene-CLI86_00775;Name=CLI86_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00775 NSLJ01000001.1 GeneMarkS+ CDS 180936 181313 . + 0 ID=cds-PDP45194.1;Parent=gene-CLI86_00775;Dbxref=NCBI_GP:PDP45194.1;Name=PDP45194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00775;product=hypothetical protein;protein_id=PDP45194.1;transl_table=11 NSLJ01000001.1 Genbank gene 181426 182394 . + . ID=gene-CLI86_00780;Name=CLI86_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00780 NSLJ01000001.1 Protein Homology CDS 181426 182394 . + 0 ID=cds-PDP45220.1;Parent=gene-CLI86_00780;Dbxref=NCBI_GP:PDP45220.1;Name=PDP45220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097286.1;locus_tag=CLI86_00780;product=hypothetical protein;protein_id=PDP45220.1;transl_table=11 NSLJ01000001.1 Genbank gene 182421 183257 . + . ID=gene-CLI86_00785;Name=CLI86_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00785 NSLJ01000001.1 Protein Homology CDS 182421 183257 . + 0 ID=cds-PDP45195.1;Parent=gene-CLI86_00785;Dbxref=NCBI_GP:PDP45195.1;Name=PDP45195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097287.1;locus_tag=CLI86_00785;product=glycosyl transferase;protein_id=PDP45195.1;transl_table=11 NSLJ01000001.1 Genbank gene 183291 183839 . + . ID=gene-CLI86_00790;Name=CLI86_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00790 NSLJ01000001.1 Protein Homology CDS 183291 183839 . + 0 ID=cds-PDP45196.1;Parent=gene-CLI86_00790;Dbxref=NCBI_GP:PDP45196.1;Name=PDP45196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008769095.1;locus_tag=CLI86_00790;product=hypothetical protein;protein_id=PDP45196.1;transl_table=11 NSLJ01000001.1 Genbank gene 183916 185676 . + . ID=gene-CLI86_00795;Name=CLI86_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00795 NSLJ01000001.1 Protein Homology CDS 183916 185676 . + 0 ID=cds-PDP45197.1;Parent=gene-CLI86_00795;Dbxref=NCBI_GP:PDP45197.1;Name=PDP45197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05139.12;locus_tag=CLI86_00795;product=hypothetical protein;protein_id=PDP45197.1;transl_table=11 NSLJ01000001.1 Genbank gene 185685 185957 . + . ID=gene-CLI86_00800;Name=CLI86_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00800 NSLJ01000001.1 GeneMarkS+ CDS 185685 185957 . + 0 ID=cds-PDP45198.1;Parent=gene-CLI86_00800;Dbxref=NCBI_GP:PDP45198.1;Name=PDP45198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00800;product=hypothetical protein;protein_id=PDP45198.1;transl_table=11 ##sequence-region NSLJ01000020.1 1 52998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000020.1 Genbank region 1 52998 . + . ID=NSLJ01000020.1:1..52998;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000020.1 Genbank gene 1 199 . - . ID=gene-CLI86_08445;Name=CLI86_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08445;partial=true;start_range=.,1 NSLJ01000020.1 GeneMarkS+ CDS 1 199 . - 0 ID=cds-PDP43399.1;Parent=gene-CLI86_08445;Dbxref=NCBI_GP:PDP43399.1;Name=PDP43399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08445;partial=true;product=hypothetical protein;protein_id=PDP43399.1;start_range=.,1;transl_table=11 NSLJ01000020.1 Genbank gene 266 1036 . - . ID=gene-CLI86_08450;Name=CLI86_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08450 NSLJ01000020.1 Protein Homology CDS 266 1036 . - 0 ID=cds-PDP43435.1;Parent=gene-CLI86_08450;Dbxref=NCBI_GP:PDP43435.1;Name=PDP43435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860134.1;locus_tag=CLI86_08450;product=lysophospholipase;protein_id=PDP43435.1;transl_table=11 NSLJ01000020.1 Genbank gene 1105 1602 . - . ID=gene-CLI86_08455;Name=CLI86_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08455 NSLJ01000020.1 Protein Homology CDS 1105 1602 . - 0 ID=cds-PDP43400.1;Parent=gene-CLI86_08455;Dbxref=NCBI_GP:PDP43400.1;Name=PDP43400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223756.1;locus_tag=CLI86_08455;product=prolyl-tRNA synthetase associated domain-containing protein;protein_id=PDP43400.1;transl_table=11 NSLJ01000020.1 Genbank gene 1622 2434 . - . ID=gene-CLI86_08460;Name=CLI86_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08460 NSLJ01000020.1 Protein Homology CDS 1622 2434 . - 0 ID=cds-PDP43401.1;Parent=gene-CLI86_08460;Dbxref=NCBI_GP:PDP43401.1;Name=PDP43401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223757.1;locus_tag=CLI86_08460;product=purine nucleoside phosphorylase I%2C inosine and guanosine-specific;protein_id=PDP43401.1;transl_table=11 NSLJ01000020.1 Genbank gene 2697 2774 . + . ID=gene-CLI86_08465;Name=CLI86_08465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_08465 NSLJ01000020.1 tRNAscan-SE tRNA 2697 2774 . + . ID=rna-CLI86_08465;Parent=gene-CLI86_08465;anticodon=(pos:2732..2734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08465;product=tRNA-Pro NSLJ01000020.1 tRNAscan-SE exon 2697 2774 . + . ID=exon-CLI86_08465-1;Parent=rna-CLI86_08465;anticodon=(pos:2732..2734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_08465;product=tRNA-Pro NSLJ01000020.1 Genbank gene 3123 4808 . + . ID=gene-CLI86_08470;Name=CLI86_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08470 NSLJ01000020.1 Protein Homology CDS 3123 4808 . + 0 ID=cds-PDP43402.1;Parent=gene-CLI86_08470;Dbxref=NCBI_GP:PDP43402.1;Name=PDP43402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13424.4;locus_tag=CLI86_08470;product=LuxR family transcriptional regulator;protein_id=PDP43402.1;transl_table=11 NSLJ01000020.1 Genbank gene 5072 8236 . + . ID=gene-CLI86_08475;Name=CLI86_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08475 NSLJ01000020.1 Protein Homology CDS 5072 8236 . + 0 ID=cds-PDP43403.1;Parent=gene-CLI86_08475;Dbxref=NCBI_GP:PDP43403.1;Name=PDP43403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223760.1;locus_tag=CLI86_08475;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43403.1;transl_table=11 NSLJ01000020.1 Genbank gene 8260 9771 . + . ID=gene-CLI86_08480;Name=CLI86_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08480 NSLJ01000020.1 Protein Homology CDS 8260 9771 . + 0 ID=cds-PDP43404.1;Parent=gene-CLI86_08480;Dbxref=NCBI_GP:PDP43404.1;Name=PDP43404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007411273.1;locus_tag=CLI86_08480;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43404.1;transl_table=11 NSLJ01000020.1 Genbank gene 9802 12936 . + . ID=gene-CLI86_08485;Name=CLI86_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08485 NSLJ01000020.1 Protein Homology CDS 9802 12936 . + 0 ID=cds-PDP43405.1;Parent=gene-CLI86_08485;Dbxref=NCBI_GP:PDP43405.1;Name=PDP43405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223762.1;locus_tag=CLI86_08485;product=glycoside hydrolase family 2;protein_id=PDP43405.1;transl_table=11 NSLJ01000020.1 Genbank gene 12953 13225 . + . ID=gene-CLI86_08490;Name=CLI86_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08490 NSLJ01000020.1 Protein Homology CDS 12953 13225 . + 0 ID=cds-PDP43406.1;Parent=gene-CLI86_08490;Dbxref=NCBI_GP:PDP43406.1;Name=PDP43406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860915.1;locus_tag=CLI86_08490;product=DUF340 domain-containing protein;protein_id=PDP43406.1;transl_table=11 NSLJ01000020.1 Genbank gene 13252 13878 . + . ID=gene-CLI86_08495;Name=CLI86_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08495 NSLJ01000020.1 Protein Homology CDS 13252 13878 . + 0 ID=cds-PDP43407.1;Parent=gene-CLI86_08495;Dbxref=NCBI_GP:PDP43407.1;Name=PDP43407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223764.1;locus_tag=CLI86_08495;product=DUF340 domain-containing protein;protein_id=PDP43407.1;transl_table=11 NSLJ01000020.1 Genbank gene 14038 14844 . + . ID=gene-CLI86_08500;Name=CLI86_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08500 NSLJ01000020.1 Protein Homology CDS 14038 14844 . + 0 ID=cds-PDP43436.1;Parent=gene-CLI86_08500;Dbxref=NCBI_GP:PDP43436.1;Name=PDP43436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223765.1;locus_tag=CLI86_08500;product=MBL fold metallo-hydrolase;protein_id=PDP43436.1;transl_table=11 NSLJ01000020.1 Genbank gene 14847 15227 . - . ID=gene-CLI86_08505;Name=CLI86_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08505 NSLJ01000020.1 Protein Homology CDS 14847 15227 . - 0 ID=cds-PDP43408.1;Parent=gene-CLI86_08505;Dbxref=NCBI_GP:PDP43408.1;Name=PDP43408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223766.1;locus_tag=CLI86_08505;product=DUF1232 domain-containing protein;protein_id=PDP43408.1;transl_table=11 NSLJ01000020.1 Genbank gene 15388 17181 . + . ID=gene-CLI86_08510;Name=CLI86_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08510 NSLJ01000020.1 Protein Homology CDS 15388 17181 . + 0 ID=cds-PDP43409.1;Parent=gene-CLI86_08510;Dbxref=NCBI_GP:PDP43409.1;Name=PDP43409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223768.1;locus_tag=CLI86_08510;product=L-fucose isomerase;protein_id=PDP43409.1;transl_table=11 NSLJ01000020.1 Genbank gene 17196 18506 . + . ID=gene-CLI86_08515;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CLI86_08515 NSLJ01000020.1 Protein Homology CDS 17196 18506 . + 0 ID=cds-PDP43437.1;Parent=gene-CLI86_08515;Dbxref=NCBI_GP:PDP43437.1;Name=PDP43437.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810190.1;locus_tag=CLI86_08515;product=L-fucose:H+ symporter permease;protein_id=PDP43437.1;transl_table=11 NSLJ01000020.1 Genbank gene 18822 19961 . + . ID=gene-CLI86_08520;Name=CLI86_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08520 NSLJ01000020.1 Protein Homology CDS 18822 19961 . + 0 ID=cds-PDP43410.1;Parent=gene-CLI86_08520;Dbxref=NCBI_GP:PDP43410.1;Name=PDP43410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223770.1;locus_tag=CLI86_08520;product=cytidyltransferase;protein_id=PDP43410.1;transl_table=11 NSLJ01000020.1 Genbank gene 19966 20856 . + . ID=gene-CLI86_08525;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CLI86_08525 NSLJ01000020.1 Protein Homology CDS 19966 20856 . + 0 ID=cds-PDP43411.1;Parent=gene-CLI86_08525;Dbxref=NCBI_GP:PDP43411.1;Name=PDP43411.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223771.1;locus_tag=CLI86_08525;product=glucose-1-phosphate thymidylyltransferase;protein_id=PDP43411.1;transl_table=11 NSLJ01000020.1 Genbank gene 21076 22245 . + . ID=gene-CLI86_08530;Name=CLI86_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08530 NSLJ01000020.1 Protein Homology CDS 21076 22245 . + 0 ID=cds-PDP43412.1;Parent=gene-CLI86_08530;Dbxref=NCBI_GP:PDP43412.1;Name=PDP43412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772416.1;locus_tag=CLI86_08530;product=OmpA family protein;protein_id=PDP43412.1;transl_table=11 NSLJ01000020.1 Genbank gene 22344 24791 . + . ID=gene-CLI86_08535;Name=CLI86_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08535 NSLJ01000020.1 Protein Homology CDS 22344 24791 . + 0 ID=cds-PDP43413.1;Parent=gene-CLI86_08535;Dbxref=NCBI_GP:PDP43413.1;Name=PDP43413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223774.1;locus_tag=CLI86_08535;product=cytochrome C biogenesis protein;protein_id=PDP43413.1;transl_table=11 NSLJ01000020.1 Genbank gene 24781 27321 . + . ID=gene-CLI86_08540;Name=CLI86_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08540 NSLJ01000020.1 Protein Homology CDS 24781 27321 . + 0 ID=cds-PDP43414.1;Parent=gene-CLI86_08540;Dbxref=NCBI_GP:PDP43414.1;Name=PDP43414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223775.1;locus_tag=CLI86_08540;product=S9 family peptidase;protein_id=PDP43414.1;transl_table=11 NSLJ01000020.1 Genbank gene 27380 27730 . + . ID=gene-CLI86_08545;Name=CLI86_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08545 NSLJ01000020.1 GeneMarkS+ CDS 27380 27730 . + 0 ID=cds-PDP43415.1;Parent=gene-CLI86_08545;Dbxref=NCBI_GP:PDP43415.1;Name=PDP43415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08545;product=hypothetical protein;protein_id=PDP43415.1;transl_table=11 NSLJ01000020.1 Genbank gene 27723 29984 . + . ID=gene-CLI86_08550;Name=CLI86_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08550 NSLJ01000020.1 Protein Homology CDS 27723 29984 . + 0 ID=cds-PDP43416.1;Parent=gene-CLI86_08550;Dbxref=NCBI_GP:PDP43416.1;Name=PDP43416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223777.1;locus_tag=CLI86_08550;product=alpha-mannosidase;protein_id=PDP43416.1;transl_table=11 NSLJ01000020.1 Genbank gene 30010 30882 . + . ID=gene-CLI86_08555;Name=CLI86_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08555 NSLJ01000020.1 Protein Homology CDS 30010 30882 . + 0 ID=cds-PDP43417.1;Parent=gene-CLI86_08555;Dbxref=NCBI_GP:PDP43417.1;Name=PDP43417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223778.1;locus_tag=CLI86_08555;product=hypothetical protein;protein_id=PDP43417.1;transl_table=11 NSLJ01000020.1 Genbank gene 30894 32216 . - . ID=gene-CLI86_08560;Name=CLI86_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08560 NSLJ01000020.1 Protein Homology CDS 30894 32216 . - 0 ID=cds-PDP43418.1;Parent=gene-CLI86_08560;Dbxref=NCBI_GP:PDP43418.1;Name=PDP43418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223779.1;locus_tag=CLI86_08560;product=MATE family efflux transporter;protein_id=PDP43418.1;transl_table=11 NSLJ01000020.1 Genbank gene 32289 32639 . - . ID=gene-CLI86_08565;Name=CLI86_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08565 NSLJ01000020.1 Protein Homology CDS 32289 32639 . - 0 ID=cds-PDP43419.1;Parent=gene-CLI86_08565;Dbxref=NCBI_GP:PDP43419.1;Name=PDP43419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843338.1;locus_tag=CLI86_08565;product=aspartate 1-decarboxylase;protein_id=PDP43419.1;transl_table=11 NSLJ01000020.1 Genbank gene 32661 33500 . - . ID=gene-CLI86_08570;Name=CLI86_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08570 NSLJ01000020.1 Protein Homology CDS 32661 33500 . - 0 ID=cds-PDP43420.1;Parent=gene-CLI86_08570;Dbxref=NCBI_GP:PDP43420.1;Name=PDP43420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646584.1;locus_tag=CLI86_08570;product=pantoate--beta-alanine ligase;protein_id=PDP43420.1;transl_table=11 NSLJ01000020.1 Genbank gene 33698 34507 . + . ID=gene-CLI86_08575;Name=CLI86_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08575 NSLJ01000020.1 Protein Homology CDS 33698 34507 . + 0 ID=cds-PDP43438.1;Parent=gene-CLI86_08575;Dbxref=NCBI_GP:PDP43438.1;Name=PDP43438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613285.1;locus_tag=CLI86_08575;product=glycogen synthase;protein_id=PDP43438.1;transl_table=11 NSLJ01000020.1 Genbank gene 34509 35927 . + . ID=gene-CLI86_08580;Name=CLI86_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08580 NSLJ01000020.1 Protein Homology CDS 34509 35927 . + 0 ID=cds-PDP43421.1;Parent=gene-CLI86_08580;Dbxref=NCBI_GP:PDP43421.1;Name=PDP43421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008774106.1;locus_tag=CLI86_08580;product=DUF4270 domain-containing protein;protein_id=PDP43421.1;transl_table=11 NSLJ01000020.1 Genbank gene 36636 37238 . + . ID=gene-CLI86_08585;Name=CLI86_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08585 NSLJ01000020.1 Protein Homology CDS 36636 37238 . + 0 ID=cds-PDP43439.1;Parent=gene-CLI86_08585;Dbxref=NCBI_GP:PDP43439.1;Name=PDP43439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223786.1;locus_tag=CLI86_08585;product=hypothetical protein;protein_id=PDP43439.1;transl_table=11 NSLJ01000020.1 Genbank gene 37264 37521 . + . ID=gene-CLI86_08590;Name=CLI86_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08590 NSLJ01000020.1 Protein Homology CDS 37264 37521 . + 0 ID=cds-PDP43422.1;Parent=gene-CLI86_08590;Dbxref=NCBI_GP:PDP43422.1;Name=PDP43422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223787.1;locus_tag=CLI86_08590;product=hypothetical protein;protein_id=PDP43422.1;transl_table=11 NSLJ01000020.1 Genbank gene 37558 39540 . + . ID=gene-CLI86_08595;Name=CLI86_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08595 NSLJ01000020.1 GeneMarkS+ CDS 37558 39540 . + 0 ID=cds-PDP43423.1;Parent=gene-CLI86_08595;Dbxref=NCBI_GP:PDP43423.1;Name=PDP43423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08595;product=hypothetical protein;protein_id=PDP43423.1;transl_table=11 NSLJ01000020.1 Genbank gene 39557 40345 . + . ID=gene-CLI86_08600;Name=CLI86_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08600 NSLJ01000020.1 GeneMarkS+ CDS 39557 40345 . + 0 ID=cds-PDP43424.1;Parent=gene-CLI86_08600;Dbxref=NCBI_GP:PDP43424.1;Name=PDP43424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08600;product=hypothetical protein;protein_id=PDP43424.1;transl_table=11 NSLJ01000020.1 Genbank gene 40439 40993 . + . ID=gene-CLI86_08605;Name=CLI86_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08605 NSLJ01000020.1 Protein Homology CDS 40439 40993 . + 0 ID=cds-PDP43425.1;Parent=gene-CLI86_08605;Dbxref=NCBI_GP:PDP43425.1;Name=PDP43425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223790.1;locus_tag=CLI86_08605;product=hypothetical protein;protein_id=PDP43425.1;transl_table=11 NSLJ01000020.1 Genbank gene 41024 41944 . + . ID=gene-CLI86_08610;Name=CLI86_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08610 NSLJ01000020.1 Protein Homology CDS 41024 41944 . + 0 ID=cds-PDP43426.1;Parent=gene-CLI86_08610;Dbxref=NCBI_GP:PDP43426.1;Name=PDP43426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13280.4;locus_tag=CLI86_08610;product=WYL domain-containing protein;protein_id=PDP43426.1;transl_table=11 NSLJ01000020.1 Genbank gene 42154 43359 . + . ID=gene-CLI86_08615;Name=CLI86_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08615 NSLJ01000020.1 Protein Homology CDS 42154 43359 . + 0 ID=cds-PDP43427.1;Parent=gene-CLI86_08615;Dbxref=NCBI_GP:PDP43427.1;Name=PDP43427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223792.1;locus_tag=CLI86_08615;product=DUF2029 domain-containing protein;protein_id=PDP43427.1;transl_table=11 NSLJ01000020.1 Genbank gene 43392 44171 . + . ID=gene-CLI86_08620;Name=CLI86_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08620 NSLJ01000020.1 Protein Homology CDS 43392 44171 . + 0 ID=cds-PDP43428.1;Parent=gene-CLI86_08620;Dbxref=NCBI_GP:PDP43428.1;Name=PDP43428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223793.1;locus_tag=CLI86_08620;product=polysaccharide deacetylase;protein_id=PDP43428.1;transl_table=11 NSLJ01000020.1 Genbank gene 44294 44653 . + . ID=gene-CLI86_08625;Name=CLI86_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08625 NSLJ01000020.1 Protein Homology CDS 44294 44653 . + 0 ID=cds-PDP43429.1;Parent=gene-CLI86_08625;Dbxref=NCBI_GP:PDP43429.1;Name=PDP43429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223794.1;locus_tag=CLI86_08625;product=transcriptional regulator;protein_id=PDP43429.1;transl_table=11 NSLJ01000020.1 Genbank gene 44660 46525 . + . ID=gene-CLI86_08630;Name=CLI86_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08630 NSLJ01000020.1 Protein Homology CDS 44660 46525 . + 0 ID=cds-PDP43430.1;Parent=gene-CLI86_08630;Dbxref=NCBI_GP:PDP43430.1;Name=PDP43430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538482.1;locus_tag=CLI86_08630;product=energy transducer TonB;protein_id=PDP43430.1;transl_table=11 NSLJ01000020.1 Genbank gene 46812 47948 . + . ID=gene-CLI86_08635;Name=CLI86_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08635 NSLJ01000020.1 Protein Homology CDS 46812 47948 . + 0 ID=cds-PDP43431.1;Parent=gene-CLI86_08635;Dbxref=NCBI_GP:PDP43431.1;Name=PDP43431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13970.4;locus_tag=CLI86_08635;product=hypothetical protein;protein_id=PDP43431.1;transl_table=11 NSLJ01000020.1 Genbank gene 48123 49172 . + . ID=gene-CLI86_08640;Name=CLI86_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08640 NSLJ01000020.1 Protein Homology CDS 48123 49172 . + 0 ID=cds-PDP43432.1;Parent=gene-CLI86_08640;Dbxref=NCBI_GP:PDP43432.1;Name=PDP43432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223802.1;locus_tag=CLI86_08640;product=6-bladed beta-propeller;protein_id=PDP43432.1;transl_table=11 NSLJ01000020.1 Genbank gene 49218 50324 . + . ID=gene-CLI86_08645;Name=CLI86_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08645 NSLJ01000020.1 Protein Homology CDS 49218 50324 . + 0 ID=cds-PDP43433.1;Parent=gene-CLI86_08645;Dbxref=NCBI_GP:PDP43433.1;Name=PDP43433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15869.3;locus_tag=CLI86_08645;product=hypothetical protein;protein_id=PDP43433.1;transl_table=11 NSLJ01000020.1 Genbank gene 50607 52577 . + . ID=gene-CLI86_08650;Name=CLI86_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08650 NSLJ01000020.1 GeneMarkS+ CDS 50607 52577 . + 0 ID=cds-PDP43434.1;Parent=gene-CLI86_08650;Dbxref=NCBI_GP:PDP43434.1;Name=PDP43434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08650;product=hypothetical protein;protein_id=PDP43434.1;transl_table=11 NSLJ01000020.1 Genbank gene 52891 52998 . + . ID=gene-CLI86_08655;Name=CLI86_08655;end_range=52998,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08655;partial=true NSLJ01000020.1 Protein Homology CDS 52891 52998 . + 0 ID=cds-PDP43440.1;Parent=gene-CLI86_08655;Dbxref=NCBI_GP:PDP43440.1;Name=PDP43440.1;end_range=52998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224670.1;locus_tag=CLI86_08655;partial=true;product=IS1595 family transposase;protein_id=PDP43440.1;transl_table=11 ##sequence-region NSLJ01000021.1 1 49481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000021.1 Genbank region 1 49481 . + . ID=NSLJ01000021.1:1..49481;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000021.1 Genbank gene 1 5120 . - . ID=gene-CLI86_08660;Name=CLI86_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08660;partial=true;start_range=.,1 NSLJ01000021.1 GeneMarkS+ CDS 1 5120 . - 0 ID=cds-PDP43353.1;Parent=gene-CLI86_08660;Dbxref=NCBI_GP:PDP43353.1;Name=PDP43353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08660;partial=true;product=hypothetical protein;protein_id=PDP43353.1;start_range=.,1;transl_table=11 NSLJ01000021.1 Genbank gene 5507 5857 . - . ID=gene-CLI86_08665;Name=CLI86_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08665 NSLJ01000021.1 GeneMarkS+ CDS 5507 5857 . - 0 ID=cds-PDP43354.1;Parent=gene-CLI86_08665;Dbxref=NCBI_GP:PDP43354.1;Name=PDP43354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08665;product=hypothetical protein;protein_id=PDP43354.1;transl_table=11 NSLJ01000021.1 Genbank gene 6195 6380 . - . ID=gene-CLI86_08670;Name=CLI86_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08670 NSLJ01000021.1 GeneMarkS+ CDS 6195 6380 . - 0 ID=cds-PDP43355.1;Parent=gene-CLI86_08670;Dbxref=NCBI_GP:PDP43355.1;Name=PDP43355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08670;product=hypothetical protein;protein_id=PDP43355.1;transl_table=11 NSLJ01000021.1 Genbank pseudogene 6475 6573 . - . ID=gene-CLI86_08675;Name=CLI86_08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08675;pseudo=true NSLJ01000021.1 Protein Homology CDS 6475 6573 . - 0 ID=cds-CLI86_08675;Parent=gene-CLI86_08675;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843441.1;locus_tag=CLI86_08675;product=cytochrome C assembly protein;pseudo=true;transl_table=11 NSLJ01000021.1 Genbank gene 6639 8078 . - . ID=gene-CLI86_08680;Name=CLI86_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08680 NSLJ01000021.1 Protein Homology CDS 6639 8078 . - 0 ID=cds-PDP43356.1;Parent=gene-CLI86_08680;Dbxref=NCBI_GP:PDP43356.1;Name=PDP43356.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03544.12;locus_tag=CLI86_08680;product=TonB-dependent receptor;protein_id=PDP43356.1;transl_table=11 NSLJ01000021.1 Genbank gene 8085 8465 . - . ID=gene-CLI86_08685;Name=CLI86_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08685 NSLJ01000021.1 Protein Homology CDS 8085 8465 . - 0 ID=cds-PDP43357.1;Parent=gene-CLI86_08685;Dbxref=NCBI_GP:PDP43357.1;Name=PDP43357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223701.1;locus_tag=CLI86_08685;product=transcriptional regulator;protein_id=PDP43357.1;transl_table=11 NSLJ01000021.1 Genbank gene 8709 10355 . + . ID=gene-CLI86_08690;Name=CLI86_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08690 NSLJ01000021.1 Protein Homology CDS 8709 10355 . + 0 ID=cds-PDP43358.1;Parent=gene-CLI86_08690;Dbxref=NCBI_GP:PDP43358.1;Name=PDP43358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100379.1;locus_tag=CLI86_08690;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=PDP43358.1;transl_table=11 NSLJ01000021.1 Genbank gene 10370 10972 . + . ID=gene-CLI86_08695;Name=CLI86_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08695 NSLJ01000021.1 Protein Homology CDS 10370 10972 . + 0 ID=cds-PDP43359.1;Parent=gene-CLI86_08695;Dbxref=NCBI_GP:PDP43359.1;Name=PDP43359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145854.1;locus_tag=CLI86_08695;product=riboflavin synthase;protein_id=PDP43359.1;transl_table=11 NSLJ01000021.1 Genbank gene 10989 12329 . - . ID=gene-CLI86_08700;Name=CLI86_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08700 NSLJ01000021.1 Protein Homology CDS 10989 12329 . - 0 ID=cds-PDP43360.1;Parent=gene-CLI86_08700;Dbxref=NCBI_GP:PDP43360.1;Name=PDP43360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005862011.1;locus_tag=CLI86_08700;product=MATE family efflux transporter;protein_id=PDP43360.1;transl_table=11 NSLJ01000021.1 Genbank gene 12434 13696 . - . ID=gene-CLI86_08705;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CLI86_08705 NSLJ01000021.1 Protein Homology CDS 12434 13696 . - 0 ID=cds-PDP43361.1;Parent=gene-CLI86_08705;Dbxref=NCBI_GP:PDP43361.1;Name=PDP43361.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223696.1;locus_tag=CLI86_08705;product=phosphoglycerate kinase;protein_id=PDP43361.1;transl_table=11 NSLJ01000021.1 Genbank gene 13862 14326 . - . ID=gene-CLI86_08710;Name=CLI86_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08710 NSLJ01000021.1 Protein Homology CDS 13862 14326 . - 0 ID=cds-PDP43362.1;Parent=gene-CLI86_08710;Dbxref=NCBI_GP:PDP43362.1;Name=PDP43362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223695.1;locus_tag=CLI86_08710;product=hypothetical protein;protein_id=PDP43362.1;transl_table=11 NSLJ01000021.1 Genbank gene 14361 15272 . - . ID=gene-CLI86_08715;Name=CLI86_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08715 NSLJ01000021.1 Protein Homology CDS 14361 15272 . - 0 ID=cds-PDP43394.1;Parent=gene-CLI86_08715;Dbxref=NCBI_GP:PDP43394.1;Name=PDP43394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223694.1;locus_tag=CLI86_08715;product=protease;protein_id=PDP43394.1;transl_table=11 NSLJ01000021.1 Genbank gene 15328 16002 . - . ID=gene-CLI86_08720;Name=CLI86_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08720 NSLJ01000021.1 Protein Homology CDS 15328 16002 . - 0 ID=cds-PDP43363.1;Parent=gene-CLI86_08720;Dbxref=NCBI_GP:PDP43363.1;Name=PDP43363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223693.1;locus_tag=CLI86_08720;product=LemA family protein;protein_id=PDP43363.1;transl_table=11 NSLJ01000021.1 Genbank gene 16202 17473 . + . ID=gene-CLI86_08725;Name=CLI86_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08725 NSLJ01000021.1 Protein Homology CDS 16202 17473 . + 0 ID=cds-PDP43364.1;Parent=gene-CLI86_08725;Dbxref=NCBI_GP:PDP43364.1;Name=PDP43364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03572.16%2CHMM:PF14684.4;locus_tag=CLI86_08725;product=hypothetical protein;protein_id=PDP43364.1;transl_table=11 NSLJ01000021.1 Genbank gene 17679 18500 . + . ID=gene-CLI86_08730;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CLI86_08730 NSLJ01000021.1 Protein Homology CDS 17679 18500 . + 0 ID=cds-PDP43365.1;Parent=gene-CLI86_08730;Dbxref=NCBI_GP:PDP43365.1;Name=PDP43365.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640328.1;locus_tag=CLI86_08730;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=PDP43365.1;transl_table=11 NSLJ01000021.1 Genbank gene 18527 20005 . + . ID=gene-CLI86_08735;Name=CLI86_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08735 NSLJ01000021.1 Protein Homology CDS 18527 20005 . + 0 ID=cds-PDP43366.1;Parent=gene-CLI86_08735;Dbxref=NCBI_GP:PDP43366.1;Name=PDP43366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809842.1;locus_tag=CLI86_08735;product=proline--tRNA ligase;protein_id=PDP43366.1;transl_table=11 NSLJ01000021.1 Genbank gene 20056 20412 . + . ID=gene-CLI86_08740;Name=CLI86_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08740 NSLJ01000021.1 Protein Homology CDS 20056 20412 . + 0 ID=cds-PDP43367.1;Parent=gene-CLI86_08740;Dbxref=NCBI_GP:PDP43367.1;Name=PDP43367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223688.1;locus_tag=CLI86_08740;product=DUF3127 domain-containing protein;protein_id=PDP43367.1;transl_table=11 NSLJ01000021.1 Genbank gene 20573 21136 . + . ID=gene-CLI86_08745;Name=CLI86_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08745 NSLJ01000021.1 Protein Homology CDS 20573 21136 . + 0 ID=cds-PDP43368.1;Parent=gene-CLI86_08745;Dbxref=NCBI_GP:PDP43368.1;Name=PDP43368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223687.1;locus_tag=CLI86_08745;product=RNA polymerase sigma-70 factor;protein_id=PDP43368.1;transl_table=11 NSLJ01000021.1 Genbank gene 21242 22675 . + . ID=gene-CLI86_08750;Name=CLI86_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08750 NSLJ01000021.1 Protein Homology CDS 21242 22675 . + 0 ID=cds-PDP43395.1;Parent=gene-CLI86_08750;Dbxref=NCBI_GP:PDP43395.1;Name=PDP43395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010802880.1;locus_tag=CLI86_08750;product=rhamnulokinase;protein_id=PDP43395.1;transl_table=11 NSLJ01000021.1 Genbank gene 22717 23973 . + . ID=gene-CLI86_08755;Name=CLI86_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08755 NSLJ01000021.1 Protein Homology CDS 22717 23973 . + 0 ID=cds-PDP43369.1;Parent=gene-CLI86_08755;Dbxref=NCBI_GP:PDP43369.1;Name=PDP43369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007478945.1;locus_tag=CLI86_08755;product=L-rhamnose isomerase;protein_id=PDP43369.1;transl_table=11 NSLJ01000021.1 Genbank gene 23998 25008 . + . ID=gene-CLI86_08760;Name=CLI86_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08760 NSLJ01000021.1 Protein Homology CDS 23998 25008 . + 0 ID=cds-PDP43370.1;Parent=gene-CLI86_08760;Dbxref=NCBI_GP:PDP43370.1;Name=PDP43370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340036.1;locus_tag=CLI86_08760;product=rhamnose/proton symporter RhaT;protein_id=PDP43370.1;transl_table=11 NSLJ01000021.1 Genbank gene 25032 25841 . + . ID=gene-CLI86_08765;Name=CLI86_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08765 NSLJ01000021.1 Protein Homology CDS 25032 25841 . + 0 ID=cds-PDP43371.1;Parent=gene-CLI86_08765;Dbxref=NCBI_GP:PDP43371.1;Name=PDP43371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007217107.1;locus_tag=CLI86_08765;product=rhamnulose-1-phosphate aldolase;protein_id=PDP43371.1;transl_table=11 NSLJ01000021.1 Genbank gene 25935 26828 . - . ID=gene-CLI86_08770;Name=CLI86_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08770 NSLJ01000021.1 Protein Homology CDS 25935 26828 . - 0 ID=cds-PDP43372.1;Parent=gene-CLI86_08770;Dbxref=NCBI_GP:PDP43372.1;Name=PDP43372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008148263.1;locus_tag=CLI86_08770;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=PDP43372.1;transl_table=11 NSLJ01000021.1 Genbank gene 26852 27382 . - . ID=gene-CLI86_08775;Name=CLI86_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08775 NSLJ01000021.1 GeneMarkS+ CDS 26852 27382 . - 0 ID=cds-PDP43373.1;Parent=gene-CLI86_08775;Dbxref=NCBI_GP:PDP43373.1;Name=PDP43373.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08775;product=hypothetical protein;protein_id=PDP43373.1;transl_table=11 NSLJ01000021.1 Genbank gene 27379 29382 . - . ID=gene-CLI86_08780;Name=CLI86_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08780 NSLJ01000021.1 Protein Homology CDS 27379 29382 . - 0 ID=cds-PDP43396.1;Parent=gene-CLI86_08780;Dbxref=NCBI_GP:PDP43396.1;Name=PDP43396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010803036.1;locus_tag=CLI86_08780;product=DNA ligase (NAD(+)) LigA;protein_id=PDP43396.1;transl_table=11 NSLJ01000021.1 Genbank pseudogene 29471 29620 . + . ID=gene-CLI86_08785;Name=CLI86_08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_08785;pseudo=true NSLJ01000021.1 Protein Homology CDS 29471 29620 . + 0 ID=cds-CLI86_08785;Parent=gene-CLI86_08785;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641733.1;locus_tag=CLI86_08785;product=flavodoxin;pseudo=true;transl_table=11 NSLJ01000021.1 Genbank gene 29617 29811 . + . ID=gene-CLI86_08790;Name=CLI86_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08790 NSLJ01000021.1 GeneMarkS+ CDS 29617 29811 . + 0 ID=cds-PDP43374.1;Parent=gene-CLI86_08790;Dbxref=NCBI_GP:PDP43374.1;Name=PDP43374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08790;product=hypothetical protein;protein_id=PDP43374.1;transl_table=11 NSLJ01000021.1 Genbank gene 30245 30613 . + . ID=gene-CLI86_08795;Name=CLI86_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08795 NSLJ01000021.1 Protein Homology CDS 30245 30613 . + 0 ID=cds-PDP43375.1;Parent=gene-CLI86_08795;Dbxref=NCBI_GP:PDP43375.1;Name=PDP43375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098584.1;locus_tag=CLI86_08795;product=MarR family transcriptional regulator;protein_id=PDP43375.1;transl_table=11 NSLJ01000021.1 Genbank gene 30559 30966 . - . ID=gene-CLI86_08800;Name=CLI86_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08800 NSLJ01000021.1 GeneMarkS+ CDS 30559 30966 . - 0 ID=cds-PDP43376.1;Parent=gene-CLI86_08800;Dbxref=NCBI_GP:PDP43376.1;Name=PDP43376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08800;product=DUF1887 domain-containing protein;protein_id=PDP43376.1;transl_table=11 NSLJ01000021.1 Genbank gene 31099 33120 . - . ID=gene-CLI86_08805;Name=CLI86_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08805 NSLJ01000021.1 Protein Homology CDS 31099 33120 . - 0 ID=cds-PDP43377.1;Parent=gene-CLI86_08805;Dbxref=NCBI_GP:PDP43377.1;Name=PDP43377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03986;locus_tag=CLI86_08805;product=TIGR03986 family CRISPR-associated RAMP protein;protein_id=PDP43377.1;transl_table=11 NSLJ01000021.1 Genbank gene 33123 33509 . - . ID=gene-CLI86_08810;Name=CLI86_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08810 NSLJ01000021.1 Protein Homology CDS 33123 33509 . - 0 ID=cds-PDP43378.1;Parent=gene-CLI86_08810;Dbxref=NCBI_GP:PDP43378.1;Name=PDP43378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04423;locus_tag=CLI86_08810;product=TIGR04423 family type III CRISPR-associated protein;protein_id=PDP43378.1;transl_table=11 NSLJ01000021.1 Genbank gene 33506 34924 . - . ID=gene-CLI86_08815;Name=CLI86_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08815 NSLJ01000021.1 Protein Homology CDS 33506 34924 . - 0 ID=cds-PDP43379.1;Parent=gene-CLI86_08815;Dbxref=NCBI_GP:PDP43379.1;Name=PDP43379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013672146.1;locus_tag=CLI86_08815;product=CRISPR-associated protein;protein_id=PDP43379.1;transl_table=11 NSLJ01000021.1 Genbank gene 34921 36411 . - . ID=gene-CLI86_08820;Name=CLI86_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08820 NSLJ01000021.1 Protein Homology CDS 34921 36411 . - 0 ID=cds-PDP43380.1;Parent=gene-CLI86_08820;Dbxref=NCBI_GP:PDP43380.1;Name=PDP43380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366461.1;locus_tag=CLI86_08820;product=hypothetical protein;protein_id=PDP43380.1;transl_table=11 NSLJ01000021.1 Genbank gene 36408 36971 . - . ID=gene-CLI86_08825;Name=CLI86_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08825 NSLJ01000021.1 Protein Homology CDS 36408 36971 . - 0 ID=cds-PDP43381.1;Parent=gene-CLI86_08825;Dbxref=NCBI_GP:PDP43381.1;Name=PDP43381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03787.13;locus_tag=CLI86_08825;product=CRISPR-associated protein;protein_id=PDP43381.1;transl_table=11 NSLJ01000021.1 Genbank gene 36974 38539 . - . ID=gene-CLI86_08830;Name=CLI86_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08830 NSLJ01000021.1 Protein Homology CDS 36974 38539 . - 0 ID=cds-PDP43382.1;Parent=gene-CLI86_08830;Dbxref=NCBI_GP:PDP43382.1;Name=PDP43382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366849.1;locus_tag=CLI86_08830;product=CRISPR-associated protein;protein_id=PDP43382.1;transl_table=11 NSLJ01000021.1 Genbank gene 39116 40351 . - . ID=gene-CLI86_08835;Name=CLI86_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08835 NSLJ01000021.1 Protein Homology CDS 39116 40351 . - 0 ID=cds-PDP43383.1;Parent=gene-CLI86_08835;Dbxref=NCBI_GP:PDP43383.1;Name=PDP43383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004344106.1;locus_tag=CLI86_08835;product=hypothetical protein;protein_id=PDP43383.1;transl_table=11 NSLJ01000021.1 Genbank gene 40365 40643 . - . ID=gene-CLI86_08840;Name=CLI86_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08840 NSLJ01000021.1 GeneMarkS+ CDS 40365 40643 . - 0 ID=cds-PDP43384.1;Parent=gene-CLI86_08840;Dbxref=NCBI_GP:PDP43384.1;Name=PDP43384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08840;product=hypothetical protein;protein_id=PDP43384.1;transl_table=11 NSLJ01000021.1 Genbank gene 40739 41020 . - . ID=gene-CLI86_08845;Name=CLI86_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08845 NSLJ01000021.1 Protein Homology CDS 40739 41020 . - 0 ID=cds-PDP43385.1;Parent=gene-CLI86_08845;Dbxref=NCBI_GP:PDP43385.1;Name=PDP43385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359524.1;locus_tag=CLI86_08845;product=hypothetical protein;protein_id=PDP43385.1;transl_table=11 NSLJ01000021.1 Genbank gene 41020 41568 . - . ID=gene-CLI86_08850;Name=CLI86_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08850 NSLJ01000021.1 Protein Homology CDS 41020 41568 . - 0 ID=cds-PDP43386.1;Parent=gene-CLI86_08850;Dbxref=NCBI_GP:PDP43386.1;Name=PDP43386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368022.1;locus_tag=CLI86_08850;product=RNA polymerase subunit sigma;protein_id=PDP43386.1;transl_table=11 NSLJ01000021.1 Genbank gene 41706 42335 . - . ID=gene-CLI86_08855;Name=CLI86_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08855 NSLJ01000021.1 Protein Homology CDS 41706 42335 . - 0 ID=cds-PDP43387.1;Parent=gene-CLI86_08855;Dbxref=NCBI_GP:PDP43387.1;Name=PDP43387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223668.1;locus_tag=CLI86_08855;product=HAD family phosphatase;protein_id=PDP43387.1;transl_table=11 NSLJ01000021.1 Genbank gene 42388 43632 . - . ID=gene-CLI86_08860;Name=CLI86_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08860 NSLJ01000021.1 Protein Homology CDS 42388 43632 . - 0 ID=cds-PDP43388.1;Parent=gene-CLI86_08860;Dbxref=NCBI_GP:PDP43388.1;Name=PDP43388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223667.1;locus_tag=CLI86_08860;product=DUF1015 domain-containing protein;protein_id=PDP43388.1;transl_table=11 NSLJ01000021.1 Genbank gene 43726 44646 . - . ID=gene-CLI86_08865;Name=CLI86_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08865 NSLJ01000021.1 Protein Homology CDS 43726 44646 . - 0 ID=cds-PDP43389.1;Parent=gene-CLI86_08865;Dbxref=NCBI_GP:PDP43389.1;Name=PDP43389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010537837.1;locus_tag=CLI86_08865;product=3-phosphoglycerate dehydrogenase;protein_id=PDP43389.1;transl_table=11 NSLJ01000021.1 Genbank gene 44666 45079 . - . ID=gene-CLI86_08870;Name=CLI86_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08870 NSLJ01000021.1 Protein Homology CDS 44666 45079 . - 0 ID=cds-PDP43390.1;Parent=gene-CLI86_08870;Dbxref=NCBI_GP:PDP43390.1;Name=PDP43390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009217280.1;locus_tag=CLI86_08870;product=four helix bundle protein;protein_id=PDP43390.1;transl_table=11 NSLJ01000021.1 Genbank gene 45126 46193 . - . ID=gene-CLI86_08875;Name=CLI86_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08875 NSLJ01000021.1 Protein Homology CDS 45126 46193 . - 0 ID=cds-PDP43391.1;Parent=gene-CLI86_08875;Dbxref=NCBI_GP:PDP43391.1;Name=PDP43391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855647.1;locus_tag=CLI86_08875;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=PDP43391.1;transl_table=11 NSLJ01000021.1 Genbank gene 46319 49198 . - . ID=gene-CLI86_08880;Name=CLI86_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08880 NSLJ01000021.1 Protein Homology CDS 46319 49198 . - 0 ID=cds-PDP43392.1;Parent=gene-CLI86_08880;Dbxref=NCBI_GP:PDP43392.1;Name=PDP43392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966349.1;locus_tag=CLI86_08880;product=hypothetical protein;protein_id=PDP43392.1;transl_table=11 NSLJ01000021.1 Genbank gene 49362 49481 . - . ID=gene-CLI86_08885;Name=CLI86_08885;end_range=49481,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08885;partial=true NSLJ01000021.1 Protein Homology CDS 49362 49481 . - 0 ID=cds-PDP43393.1;Parent=gene-CLI86_08885;Dbxref=NCBI_GP:PDP43393.1;Name=PDP43393.1;end_range=49481,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_08885;partial=true;product=IS1595 family transposase;protein_id=PDP43393.1;transl_table=11 ##sequence-region NSLJ01000022.1 1 48503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000022.1 Genbank region 1 48503 . + . ID=NSLJ01000022.1:1..48503;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000022.1 Genbank gene 1 572 . + . ID=gene-CLI86_08890;Name=CLI86_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08890;partial=true;start_range=.,1 NSLJ01000022.1 Protein Homology CDS 1 572 . + 2 ID=cds-PDP43307.1;Parent=gene-CLI86_08890;Dbxref=NCBI_GP:PDP43307.1;Name=PDP43307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_08890;partial=true;product=IS1595 family transposase;protein_id=PDP43307.1;start_range=.,1;transl_table=11 NSLJ01000022.1 Genbank gene 573 863 . - . ID=gene-CLI86_08895;Name=CLI86_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08895 NSLJ01000022.1 Protein Homology CDS 573 863 . - 0 ID=cds-PDP43308.1;Parent=gene-CLI86_08895;Dbxref=NCBI_GP:PDP43308.1;Name=PDP43308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00413.22;locus_tag=CLI86_08895;product=hypothetical protein;protein_id=PDP43308.1;transl_table=11 NSLJ01000022.1 Genbank gene 865 1221 . - . ID=gene-CLI86_08900;Name=CLI86_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08900 NSLJ01000022.1 GeneMarkS+ CDS 865 1221 . - 0 ID=cds-PDP43309.1;Parent=gene-CLI86_08900;Dbxref=NCBI_GP:PDP43309.1;Name=PDP43309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08900;product=hypothetical protein;protein_id=PDP43309.1;transl_table=11 NSLJ01000022.1 Genbank gene 1492 1683 . - . ID=gene-CLI86_08905;Name=CLI86_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08905 NSLJ01000022.1 GeneMarkS+ CDS 1492 1683 . - 0 ID=cds-PDP43310.1;Parent=gene-CLI86_08905;Dbxref=NCBI_GP:PDP43310.1;Name=PDP43310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_08905;product=hypothetical protein;protein_id=PDP43310.1;transl_table=11 NSLJ01000022.1 Genbank gene 2227 5856 . - . ID=gene-CLI86_08910;Name=CLI86_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08910 NSLJ01000022.1 Protein Homology CDS 2227 5856 . - 0 ID=cds-PDP43311.1;Parent=gene-CLI86_08910;Dbxref=NCBI_GP:PDP43311.1;Name=PDP43311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639902.1;locus_tag=CLI86_08910;product=beta-glycosidase;protein_id=PDP43311.1;transl_table=11 NSLJ01000022.1 Genbank gene 6000 6503 . - . ID=gene-CLI86_08915;Name=CLI86_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08915 NSLJ01000022.1 Protein Homology CDS 6000 6503 . - 0 ID=cds-PDP43312.1;Parent=gene-CLI86_08915;Dbxref=NCBI_GP:PDP43312.1;Name=PDP43312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225815.1;locus_tag=CLI86_08915;product=antitermination protein NusG;protein_id=PDP43312.1;transl_table=11 NSLJ01000022.1 Genbank gene 6500 7981 . - . ID=gene-CLI86_08920;Name=CLI86_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08920 NSLJ01000022.1 Protein Homology CDS 6500 7981 . - 0 ID=cds-PDP43313.1;Parent=gene-CLI86_08920;Dbxref=NCBI_GP:PDP43313.1;Name=PDP43313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017544.1;locus_tag=CLI86_08920;product=hypothetical protein;protein_id=PDP43313.1;transl_table=11 NSLJ01000022.1 Genbank gene 7989 8783 . - . ID=gene-CLI86_08925;Name=CLI86_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08925 NSLJ01000022.1 Protein Homology CDS 7989 8783 . - 0 ID=cds-PDP43314.1;Parent=gene-CLI86_08925;Dbxref=NCBI_GP:PDP43314.1;Name=PDP43314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225817.1;locus_tag=CLI86_08925;product=glycerophosphodiester phosphodiesterase;protein_id=PDP43314.1;transl_table=11 NSLJ01000022.1 Genbank gene 8785 9723 . - . ID=gene-CLI86_08930;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CLI86_08930 NSLJ01000022.1 Protein Homology CDS 8785 9723 . - 0 ID=cds-PDP43315.1;Parent=gene-CLI86_08930;Dbxref=NCBI_GP:PDP43315.1;Name=PDP43315.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225818.1;locus_tag=CLI86_08930;product=thioredoxin-disulfide reductase;protein_id=PDP43315.1;transl_table=11 NSLJ01000022.1 Genbank gene 9765 10409 . - . ID=gene-CLI86_08935;Name=CLI86_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08935 NSLJ01000022.1 Protein Homology CDS 9765 10409 . - 0 ID=cds-PDP43316.1;Parent=gene-CLI86_08935;Dbxref=NCBI_GP:PDP43316.1;Name=PDP43316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155088.1;locus_tag=CLI86_08935;product=hypothetical protein;protein_id=PDP43316.1;transl_table=11 NSLJ01000022.1 Genbank gene 10406 12853 . - . ID=gene-CLI86_08940;Name=CLI86_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08940 NSLJ01000022.1 Protein Homology CDS 10406 12853 . - 0 ID=cds-PDP43317.1;Parent=gene-CLI86_08940;Dbxref=NCBI_GP:PDP43317.1;Name=PDP43317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225820.1;locus_tag=CLI86_08940;product=cell division protein FtsK;protein_id=PDP43317.1;transl_table=11 NSLJ01000022.1 Genbank gene 13139 14911 . + . ID=gene-CLI86_08945;Name=CLI86_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08945 NSLJ01000022.1 Protein Homology CDS 13139 14911 . + 0 ID=cds-PDP43318.1;Parent=gene-CLI86_08945;Dbxref=NCBI_GP:PDP43318.1;Name=PDP43318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016276655.1;locus_tag=CLI86_08945;product=aspartate--tRNA ligase;protein_id=PDP43318.1;transl_table=11 NSLJ01000022.1 Genbank gene 14926 16023 . + . ID=gene-CLI86_08950;Name=CLI86_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08950 NSLJ01000022.1 Protein Homology CDS 14926 16023 . + 0 ID=cds-PDP43319.1;Parent=gene-CLI86_08950;Dbxref=NCBI_GP:PDP43319.1;Name=PDP43319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225822.1;locus_tag=CLI86_08950;product=Nif3-like dinuclear metal center hexameric protein;protein_id=PDP43319.1;transl_table=11 NSLJ01000022.1 Genbank gene 16035 17024 . + . ID=gene-CLI86_08955;Name=CLI86_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08955 NSLJ01000022.1 Protein Homology CDS 16035 17024 . + 0 ID=cds-PDP43320.1;Parent=gene-CLI86_08955;Dbxref=NCBI_GP:PDP43320.1;Name=PDP43320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225823.1;locus_tag=CLI86_08955;product=hypothetical protein;protein_id=PDP43320.1;transl_table=11 NSLJ01000022.1 Genbank gene 17100 18419 . + . ID=gene-CLI86_08960;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CLI86_08960 NSLJ01000022.1 Protein Homology CDS 17100 18419 . + 0 ID=cds-PDP43321.1;Parent=gene-CLI86_08960;Dbxref=NCBI_GP:PDP43321.1;Name=PDP43321.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856304.1;locus_tag=CLI86_08960;product=tRNA lysidine(34) synthetase TilS;protein_id=PDP43321.1;transl_table=11 NSLJ01000022.1 Genbank gene 18643 20619 . + . ID=gene-CLI86_08965;Name=CLI86_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08965 NSLJ01000022.1 Protein Homology CDS 18643 20619 . + 0 ID=cds-PDP43322.1;Parent=gene-CLI86_08965;Dbxref=NCBI_GP:PDP43322.1;Name=PDP43322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010803566.1;locus_tag=CLI86_08965;product=transcription termination factor Rho;protein_id=PDP43322.1;transl_table=11 NSLJ01000022.1 Genbank gene 20882 21448 . + . ID=gene-CLI86_08970;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CLI86_08970 NSLJ01000022.1 Protein Homology CDS 20882 21448 . + 0 ID=cds-PDP43323.1;Parent=gene-CLI86_08970;Dbxref=NCBI_GP:PDP43323.1;Name=PDP43323.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004291893.1;locus_tag=CLI86_08970;product=peroxiredoxin;protein_id=PDP43323.1;transl_table=11 NSLJ01000022.1 Genbank gene 21680 22372 . + . ID=gene-CLI86_08975;Name=CLI86_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08975 NSLJ01000022.1 Protein Homology CDS 21680 22372 . + 0 ID=cds-PDP43324.1;Parent=gene-CLI86_08975;Dbxref=NCBI_GP:PDP43324.1;Name=PDP43324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01814.21;locus_tag=CLI86_08975;product=hypothetical protein;protein_id=PDP43324.1;transl_table=11 NSLJ01000022.1 Genbank gene 22369 22971 . + . ID=gene-CLI86_08980;Name=CLI86_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08980 NSLJ01000022.1 Protein Homology CDS 22369 22971 . + 0 ID=cds-PDP43325.1;Parent=gene-CLI86_08980;Dbxref=NCBI_GP:PDP43325.1;Name=PDP43325.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=CLI86_08980;product=DNA-binding response regulator;protein_id=PDP43325.1;transl_table=11 NSLJ01000022.1 Genbank gene 23086 24762 . + . ID=gene-CLI86_08985;Name=CLI86_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08985 NSLJ01000022.1 Protein Homology CDS 23086 24762 . + 0 ID=cds-PDP43326.1;Parent=gene-CLI86_08985;Dbxref=NCBI_GP:PDP43326.1;Name=PDP43326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640306.1;locus_tag=CLI86_08985;product=transporter;protein_id=PDP43326.1;transl_table=11 NSLJ01000022.1 Genbank gene 24909 26468 . - . ID=gene-CLI86_08990;Name=CLI86_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08990 NSLJ01000022.1 Protein Homology CDS 24909 26468 . - 0 ID=cds-PDP43327.1;Parent=gene-CLI86_08990;Dbxref=NCBI_GP:PDP43327.1;Name=PDP43327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11551.6;locus_tag=CLI86_08990;product=hypothetical protein;protein_id=PDP43327.1;transl_table=11 NSLJ01000022.1 Genbank gene 26744 27175 . - . ID=gene-CLI86_08995;Name=CLI86_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_08995 NSLJ01000022.1 Protein Homology CDS 26744 27175 . - 0 ID=cds-PDP43328.1;Parent=gene-CLI86_08995;Dbxref=NCBI_GP:PDP43328.1;Name=PDP43328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03724.14;locus_tag=CLI86_08995;product=META domain-containing protein;protein_id=PDP43328.1;transl_table=11 NSLJ01000022.1 Genbank gene 27833 29737 . - . ID=gene-CLI86_09000;Name=CLI86_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09000 NSLJ01000022.1 Protein Homology CDS 27833 29737 . - 0 ID=cds-PDP43329.1;Parent=gene-CLI86_09000;Dbxref=NCBI_GP:PDP43329.1;Name=PDP43329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225839.1;locus_tag=CLI86_09000;product=carboxylase;protein_id=PDP43329.1;transl_table=11 NSLJ01000022.1 Genbank gene 29981 31540 . - . ID=gene-CLI86_09005;Name=CLI86_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09005 NSLJ01000022.1 Protein Homology CDS 29981 31540 . - 0 ID=cds-PDP43330.1;Parent=gene-CLI86_09005;Dbxref=NCBI_GP:PDP43330.1;Name=PDP43330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225840.1;locus_tag=CLI86_09005;product=L-lactate permease;protein_id=PDP43330.1;transl_table=11 NSLJ01000022.1 Genbank gene 31583 32164 . - . ID=gene-CLI86_09010;Name=CLI86_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09010 NSLJ01000022.1 Protein Homology CDS 31583 32164 . - 0 ID=cds-PDP43347.1;Parent=gene-CLI86_09010;Dbxref=NCBI_GP:PDP43347.1;Name=PDP43347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225841.1;locus_tag=CLI86_09010;product=hypothetical protein;protein_id=PDP43347.1;transl_table=11 NSLJ01000022.1 Genbank gene 32161 33552 . - . ID=gene-CLI86_09015;Name=CLI86_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09015 NSLJ01000022.1 Protein Homology CDS 32161 33552 . - 0 ID=cds-PDP43331.1;Parent=gene-CLI86_09015;Dbxref=NCBI_GP:PDP43331.1;Name=PDP43331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225842.1;locus_tag=CLI86_09015;product=4Fe-4S ferredoxin;protein_id=PDP43331.1;transl_table=11 NSLJ01000022.1 Genbank gene 33549 34292 . - . ID=gene-CLI86_09020;Name=CLI86_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09020 NSLJ01000022.1 Protein Homology CDS 33549 34292 . - 0 ID=cds-PDP43332.1;Parent=gene-CLI86_09020;Dbxref=NCBI_GP:PDP43332.1;Name=PDP43332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225843.1;locus_tag=CLI86_09020;product=Fe-S oxidoreductase;protein_id=PDP43332.1;transl_table=11 NSLJ01000022.1 Genbank gene 34341 35696 . - . ID=gene-CLI86_09025;Name=CLI86_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09025 NSLJ01000022.1 Protein Homology CDS 34341 35696 . - 0 ID=cds-PDP43333.1;Parent=gene-CLI86_09025;Dbxref=NCBI_GP:PDP43333.1;Name=PDP43333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13372.4;locus_tag=CLI86_09025;product=hypothetical protein;protein_id=PDP43333.1;transl_table=11 NSLJ01000022.1 Genbank gene 36083 36619 . + . ID=gene-CLI86_09030;Name=CLI86_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09030 NSLJ01000022.1 Protein Homology CDS 36083 36619 . + 0 ID=cds-PDP43334.1;Parent=gene-CLI86_09030;Dbxref=NCBI_GP:PDP43334.1;Name=PDP43334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225846.1;locus_tag=CLI86_09030;product=NUDIX domain-containing protein;protein_id=PDP43334.1;transl_table=11 NSLJ01000022.1 Genbank gene 36675 37100 . + . ID=gene-CLI86_09035;Name=CLI86_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09035 NSLJ01000022.1 Protein Homology CDS 36675 37100 . + 0 ID=cds-PDP43335.1;Parent=gene-CLI86_09035;Dbxref=NCBI_GP:PDP43335.1;Name=PDP43335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856748.1;locus_tag=CLI86_09035;product=amino acid-binding protein;protein_id=PDP43335.1;transl_table=11 NSLJ01000022.1 Genbank gene 37168 37974 . + . ID=gene-CLI86_09040;Name=CLI86_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09040 NSLJ01000022.1 Protein Homology CDS 37168 37974 . + 0 ID=cds-PDP43336.1;Parent=gene-CLI86_09040;Dbxref=NCBI_GP:PDP43336.1;Name=PDP43336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639304.1;locus_tag=CLI86_09040;product=outer membrane protein assembly factor BamD;protein_id=PDP43336.1;transl_table=11 NSLJ01000022.1 Genbank gene 38003 38338 . + . ID=gene-CLI86_09045;Name=CLI86_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09045 NSLJ01000022.1 Protein Homology CDS 38003 38338 . + 0 ID=cds-PDP43337.1;Parent=gene-CLI86_09045;Dbxref=NCBI_GP:PDP43337.1;Name=PDP43337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844092.1;locus_tag=CLI86_09045;product=RNA polymerase Rpb6;protein_id=PDP43337.1;transl_table=11 NSLJ01000022.1 Genbank gene 38338 38799 . + . ID=gene-CLI86_09050;Name=CLI86_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09050 NSLJ01000022.1 Protein Homology CDS 38338 38799 . + 0 ID=cds-PDP43338.1;Parent=gene-CLI86_09050;Dbxref=NCBI_GP:PDP43338.1;Name=PDP43338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149236.1;locus_tag=CLI86_09050;product=DUF4293 domain-containing protein;protein_id=PDP43338.1;transl_table=11 NSLJ01000022.1 Genbank gene 38813 39655 . + . ID=gene-CLI86_09055;Name=CLI86_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09055 NSLJ01000022.1 Protein Homology CDS 38813 39655 . + 0 ID=cds-PDP43339.1;Parent=gene-CLI86_09055;Dbxref=NCBI_GP:PDP43339.1;Name=PDP43339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225851.1;locus_tag=CLI86_09055;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=PDP43339.1;transl_table=11 NSLJ01000022.1 Genbank gene 39652 40335 . + . ID=gene-CLI86_09060;Name=CLI86_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09060 NSLJ01000022.1 Protein Homology CDS 39652 40335 . + 0 ID=cds-PDP43340.1;Parent=gene-CLI86_09060;Dbxref=NCBI_GP:PDP43340.1;Name=PDP43340.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225852.1;locus_tag=CLI86_09060;product=lipoate-protein ligase B;protein_id=PDP43340.1;transl_table=11 NSLJ01000022.1 Genbank gene 40342 40812 . - . ID=gene-CLI86_09065;Name=CLI86_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09065 NSLJ01000022.1 Protein Homology CDS 40342 40812 . - 0 ID=cds-PDP43341.1;Parent=gene-CLI86_09065;Dbxref=NCBI_GP:PDP43341.1;Name=PDP43341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225853.1;locus_tag=CLI86_09065;product=gliding motility lipoprotein GldH;protein_id=PDP43341.1;transl_table=11 NSLJ01000022.1 Genbank gene 40805 42160 . - . ID=gene-CLI86_09070;Name=CLI86_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09070 NSLJ01000022.1 Protein Homology CDS 40805 42160 . - 0 ID=cds-PDP43342.1;Parent=gene-CLI86_09070;Dbxref=NCBI_GP:PDP43342.1;Name=PDP43342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225854.1;locus_tag=CLI86_09070;product=hypothetical protein;protein_id=PDP43342.1;transl_table=11 NSLJ01000022.1 Genbank gene 42170 43357 . - . ID=gene-CLI86_09075;Name=CLI86_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09075 NSLJ01000022.1 Protein Homology CDS 42170 43357 . - 0 ID=cds-PDP43343.1;Parent=gene-CLI86_09075;Dbxref=NCBI_GP:PDP43343.1;Name=PDP43343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225855.1;locus_tag=CLI86_09075;product=8-amino-7-oxononanoate synthase;protein_id=PDP43343.1;transl_table=11 NSLJ01000022.1 Genbank gene 43481 44227 . - . ID=gene-CLI86_09080;Name=CLI86_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09080 NSLJ01000022.1 Protein Homology CDS 43481 44227 . - 0 ID=cds-PDP43348.1;Parent=gene-CLI86_09080;Dbxref=NCBI_GP:PDP43348.1;Name=PDP43348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647778.1;locus_tag=CLI86_09080;product=tRNA (adenine-N6)-methyltransferase;protein_id=PDP43348.1;transl_table=11 NSLJ01000022.1 Genbank gene 44299 44850 . - . ID=gene-CLI86_09085;Name=CLI86_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09085 NSLJ01000022.1 GeneMarkS+ CDS 44299 44850 . - 0 ID=cds-PDP43344.1;Parent=gene-CLI86_09085;Dbxref=NCBI_GP:PDP43344.1;Name=PDP43344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09085;product=hypothetical protein;protein_id=PDP43344.1;transl_table=11 NSLJ01000022.1 Genbank gene 45001 46359 . + . ID=gene-CLI86_09090;Name=CLI86_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09090 NSLJ01000022.1 Protein Homology CDS 45001 46359 . + 0 ID=cds-PDP43349.1;Parent=gene-CLI86_09090;Dbxref=NCBI_GP:PDP43349.1;Name=PDP43349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225858.1;locus_tag=CLI86_09090;product=peptidase M20;protein_id=PDP43349.1;transl_table=11 NSLJ01000022.1 Genbank gene 46356 47618 . + . ID=gene-CLI86_09095;Name=CLI86_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09095 NSLJ01000022.1 Protein Homology CDS 46356 47618 . + 0 ID=cds-PDP43345.1;Parent=gene-CLI86_09095;Dbxref=NCBI_GP:PDP43345.1;Name=PDP43345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225859.1;locus_tag=CLI86_09095;product=chlorohydrolase;protein_id=PDP43345.1;transl_table=11 NSLJ01000022.1 Genbank gene 47697 48278 . - . ID=gene-CLI86_09100;Name=CLI86_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09100 NSLJ01000022.1 Protein Homology CDS 47697 48278 . - 0 ID=cds-PDP43346.1;Parent=gene-CLI86_09100;Dbxref=NCBI_GP:PDP43346.1;Name=PDP43346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006846944.1;locus_tag=CLI86_09100;product=hypothetical protein;protein_id=PDP43346.1;transl_table=11 ##sequence-region NSLJ01000023.1 1 48253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000023.1 Genbank region 1 48253 . + . ID=NSLJ01000023.1:1..48253;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000023.1 Genbank gene 319 3750 . - . ID=gene-CLI86_09105;Name=CLI86_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09105 NSLJ01000023.1 Protein Homology CDS 319 3750 . - 0 ID=cds-PDP43301.1;Parent=gene-CLI86_09105;Dbxref=NCBI_GP:PDP43301.1;Name=PDP43301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866783.1;locus_tag=CLI86_09105;product=hypothetical protein;protein_id=PDP43301.1;transl_table=11 NSLJ01000023.1 Genbank gene 3770 4381 . - . ID=gene-CLI86_09110;Name=CLI86_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09110 NSLJ01000023.1 Protein Homology CDS 3770 4381 . - 0 ID=cds-PDP43266.1;Parent=gene-CLI86_09110;Dbxref=NCBI_GP:PDP43266.1;Name=PDP43266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226363.1;locus_tag=CLI86_09110;product=2-hydroxyhepta-2%2C4-diene-1%2C7-dioate isomerase;protein_id=PDP43266.1;transl_table=11 NSLJ01000023.1 Genbank gene 4386 5036 . - . ID=gene-CLI86_09115;Name=CLI86_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09115 NSLJ01000023.1 Protein Homology CDS 4386 5036 . - 0 ID=cds-PDP43267.1;Parent=gene-CLI86_09115;Dbxref=NCBI_GP:PDP43267.1;Name=PDP43267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226362.1;locus_tag=CLI86_09115;product=redox-sensing transcriptional repressor Rex;protein_id=PDP43267.1;transl_table=11 NSLJ01000023.1 Genbank gene 5033 6199 . - . ID=gene-CLI86_09120;Name=CLI86_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09120 NSLJ01000023.1 Protein Homology CDS 5033 6199 . - 0 ID=cds-PDP43302.1;Parent=gene-CLI86_09120;Dbxref=NCBI_GP:PDP43302.1;Name=PDP43302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226361.1;locus_tag=CLI86_09120;product=acyltransferase;protein_id=PDP43302.1;transl_table=11 NSLJ01000023.1 Genbank gene 6239 7249 . - . ID=gene-CLI86_09125;Name=CLI86_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09125 NSLJ01000023.1 Protein Homology CDS 6239 7249 . - 0 ID=cds-PDP43268.1;Parent=gene-CLI86_09125;Dbxref=NCBI_GP:PDP43268.1;Name=PDP43268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801504.1;locus_tag=CLI86_09125;product=D-alanine--D-alanine ligase;protein_id=PDP43268.1;transl_table=11 NSLJ01000023.1 Genbank gene 7267 8337 . - . ID=gene-CLI86_09130;Name=CLI86_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09130 NSLJ01000023.1 Protein Homology CDS 7267 8337 . - 0 ID=cds-PDP43269.1;Parent=gene-CLI86_09130;Dbxref=NCBI_GP:PDP43269.1;Name=PDP43269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861030.1;locus_tag=CLI86_09130;product=pseudouridine synthase;protein_id=PDP43269.1;transl_table=11 NSLJ01000023.1 Genbank gene 8346 9014 . - . ID=gene-CLI86_09135;Name=CLI86_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09135 NSLJ01000023.1 Protein Homology CDS 8346 9014 . - 0 ID=cds-PDP43270.1;Parent=gene-CLI86_09135;Dbxref=NCBI_GP:PDP43270.1;Name=PDP43270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226358.1;locus_tag=CLI86_09135;product=PASTA domain-containing protein;protein_id=PDP43270.1;transl_table=11 NSLJ01000023.1 Genbank gene 9126 9281 . - . ID=gene-CLI86_09140;Name=CLI86_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09140 NSLJ01000023.1 Protein Homology CDS 9126 9281 . - 0 ID=cds-PDP43271.1;Parent=gene-CLI86_09140;Dbxref=NCBI_GP:PDP43271.1;Name=PDP43271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226357.1;locus_tag=CLI86_09140;product=50S ribosomal protein L34;protein_id=PDP43271.1;transl_table=11 NSLJ01000023.1 Genbank gene 9497 12343 . + . ID=gene-CLI86_09145;Name=CLI86_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09145 NSLJ01000023.1 Protein Homology CDS 9497 12343 . + 0 ID=cds-PDP43272.1;Parent=gene-CLI86_09145;Dbxref=NCBI_GP:PDP43272.1;Name=PDP43272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645179.1;locus_tag=CLI86_09145;product=protease;protein_id=PDP43272.1;transl_table=11 NSLJ01000023.1 Genbank gene 12346 13485 . - . ID=gene-CLI86_09150;Name=CLI86_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09150 NSLJ01000023.1 Protein Homology CDS 12346 13485 . - 0 ID=cds-PDP43273.1;Parent=gene-CLI86_09150;Dbxref=NCBI_GP:PDP43273.1;Name=PDP43273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226355.1;locus_tag=CLI86_09150;product=ABC transporter substrate-binding protein;protein_id=PDP43273.1;transl_table=11 NSLJ01000023.1 Genbank gene 13509 14558 . - . ID=gene-CLI86_09155;Name=CLI86_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09155 NSLJ01000023.1 GeneMarkS+ CDS 13509 14558 . - 0 ID=cds-PDP43274.1;Parent=gene-CLI86_09155;Dbxref=NCBI_GP:PDP43274.1;Name=PDP43274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09155;product=hypothetical protein;protein_id=PDP43274.1;transl_table=11 NSLJ01000023.1 Genbank gene 14646 16655 . - . ID=gene-CLI86_09160;Name=CLI86_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09160 NSLJ01000023.1 Protein Homology CDS 14646 16655 . - 0 ID=cds-PDP43275.1;Parent=gene-CLI86_09160;Dbxref=NCBI_GP:PDP43275.1;Name=PDP43275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226353.1;locus_tag=CLI86_09160;product=TonB-dependent receptor;protein_id=PDP43275.1;transl_table=11 NSLJ01000023.1 cmsearch riboswitch 16696 16901 . - . ID=id-NSLJ01000023.1:16696..16901;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000023.1 Genbank gene 17070 17146 . + . ID=gene-CLI86_09165;Name=CLI86_09165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_09165 NSLJ01000023.1 tRNAscan-SE tRNA 17070 17146 . + . ID=rna-CLI86_09165;Parent=gene-CLI86_09165;anticodon=(pos:17104..17106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09165;product=tRNA-Asp NSLJ01000023.1 tRNAscan-SE exon 17070 17146 . + . ID=exon-CLI86_09165-1;Parent=rna-CLI86_09165;anticodon=(pos:17104..17106);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09165;product=tRNA-Asp NSLJ01000023.1 Genbank gene 17455 18687 . + . ID=gene-CLI86_09170;Name=CLI86_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09170 NSLJ01000023.1 Protein Homology CDS 17455 18687 . + 0 ID=cds-PDP43276.1;Parent=gene-CLI86_09170;Dbxref=NCBI_GP:PDP43276.1;Name=PDP43276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816574.1;locus_tag=CLI86_09170;product=recombinase;protein_id=PDP43276.1;transl_table=11 NSLJ01000023.1 Genbank gene 18723 19256 . + . ID=gene-CLI86_09175;Name=CLI86_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09175 NSLJ01000023.1 Protein Homology CDS 18723 19256 . + 0 ID=cds-PDP43277.1;Parent=gene-CLI86_09175;Dbxref=NCBI_GP:PDP43277.1;Name=PDP43277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226323.1;locus_tag=CLI86_09175;product=DNA-binding protein;protein_id=PDP43277.1;transl_table=11 NSLJ01000023.1 Genbank gene 19283 19741 . + . ID=gene-CLI86_09180;Name=CLI86_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09180 NSLJ01000023.1 Protein Homology CDS 19283 19741 . + 0 ID=cds-PDP43278.1;Parent=gene-CLI86_09180;Dbxref=NCBI_GP:PDP43278.1;Name=PDP43278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585420.1;locus_tag=CLI86_09180;product=DUF1896 domain-containing protein;protein_id=PDP43278.1;transl_table=11 NSLJ01000023.1 Genbank gene 20289 20969 . + . ID=gene-CLI86_09185;Name=CLI86_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09185 NSLJ01000023.1 Protein Homology CDS 20289 20969 . + 0 ID=cds-PDP43279.1;Parent=gene-CLI86_09185;Dbxref=NCBI_GP:PDP43279.1;Name=PDP43279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224957.1;locus_tag=CLI86_09185;product=hypothetical protein;protein_id=PDP43279.1;transl_table=11 NSLJ01000023.1 Genbank gene 20974 21909 . + . ID=gene-CLI86_09190;Name=CLI86_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09190 NSLJ01000023.1 Protein Homology CDS 20974 21909 . + 0 ID=cds-PDP43280.1;Parent=gene-CLI86_09190;Dbxref=NCBI_GP:PDP43280.1;Name=PDP43280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224553.1;locus_tag=CLI86_09190;product=IS1595 family transposase;protein_id=PDP43280.1;transl_table=11 NSLJ01000023.1 Genbank gene 21934 22506 . + . ID=gene-CLI86_09195;Name=CLI86_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09195 NSLJ01000023.1 Protein Homology CDS 21934 22506 . + 0 ID=cds-PDP43281.1;Parent=gene-CLI86_09195;Dbxref=NCBI_GP:PDP43281.1;Name=PDP43281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816566.1;locus_tag=CLI86_09195;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=PDP43281.1;transl_table=11 NSLJ01000023.1 Genbank gene 22521 23135 . + . ID=gene-CLI86_09200;Name=CLI86_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09200 NSLJ01000023.1 Protein Homology CDS 22521 23135 . + 0 ID=cds-PDP43282.1;Parent=gene-CLI86_09200;Dbxref=NCBI_GP:PDP43282.1;Name=PDP43282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226318.1;locus_tag=CLI86_09200;product=SAM-dependent methyltransferase;protein_id=PDP43282.1;transl_table=11 NSLJ01000023.1 Genbank gene 23176 23691 . + . ID=gene-CLI86_09205;Name=CLI86_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09205 NSLJ01000023.1 Protein Homology CDS 23176 23691 . + 0 ID=cds-PDP43283.1;Parent=gene-CLI86_09205;Dbxref=NCBI_GP:PDP43283.1;Name=PDP43283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226317.1;locus_tag=CLI86_09205;product=hypothetical protein;protein_id=PDP43283.1;transl_table=11 NSLJ01000023.1 Genbank gene 24203 24754 . + . ID=gene-CLI86_09210;Name=CLI86_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09210 NSLJ01000023.1 GeneMarkS+ CDS 24203 24754 . + 0 ID=cds-PDP43284.1;Parent=gene-CLI86_09210;Dbxref=NCBI_GP:PDP43284.1;Name=PDP43284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09210;product=hypothetical protein;protein_id=PDP43284.1;transl_table=11 NSLJ01000023.1 Genbank gene 24768 25289 . + . ID=gene-CLI86_09215;Name=CLI86_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09215 NSLJ01000023.1 GeneMarkS+ CDS 24768 25289 . + 0 ID=cds-PDP43285.1;Parent=gene-CLI86_09215;Dbxref=NCBI_GP:PDP43285.1;Name=PDP43285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09215;product=hypothetical protein;protein_id=PDP43285.1;transl_table=11 NSLJ01000023.1 Genbank gene 25404 25724 . - . ID=gene-CLI86_09220;Name=CLI86_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09220 NSLJ01000023.1 GeneMarkS+ CDS 25404 25724 . - 0 ID=cds-PDP43286.1;Parent=gene-CLI86_09220;Dbxref=NCBI_GP:PDP43286.1;Name=PDP43286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09220;product=hypothetical protein;protein_id=PDP43286.1;transl_table=11 NSLJ01000023.1 Genbank gene 26057 26494 . - . ID=gene-CLI86_09225;Name=CLI86_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09225 NSLJ01000023.1 GeneMarkS+ CDS 26057 26494 . - 0 ID=cds-PDP43287.1;Parent=gene-CLI86_09225;Dbxref=NCBI_GP:PDP43287.1;Name=PDP43287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09225;product=hypothetical protein;protein_id=PDP43287.1;transl_table=11 NSLJ01000023.1 Genbank gene 26501 27592 . - . ID=gene-CLI86_09230;Name=CLI86_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09230 NSLJ01000023.1 GeneMarkS+ CDS 26501 27592 . - 0 ID=cds-PDP43288.1;Parent=gene-CLI86_09230;Dbxref=NCBI_GP:PDP43288.1;Name=PDP43288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09230;product=hypothetical protein;protein_id=PDP43288.1;transl_table=11 NSLJ01000023.1 Genbank gene 27603 28007 . - . ID=gene-CLI86_09235;Name=CLI86_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09235 NSLJ01000023.1 GeneMarkS+ CDS 27603 28007 . - 0 ID=cds-PDP43289.1;Parent=gene-CLI86_09235;Dbxref=NCBI_GP:PDP43289.1;Name=PDP43289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09235;product=type VI secretion system needle protein Hcp;protein_id=PDP43289.1;transl_table=11 NSLJ01000023.1 Genbank gene 28020 28445 . - . ID=gene-CLI86_09240;Name=CLI86_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09240 NSLJ01000023.1 Protein Homology CDS 28020 28445 . - 0 ID=cds-PDP43290.1;Parent=gene-CLI86_09240;Dbxref=NCBI_GP:PDP43290.1;Name=PDP43290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226309.1;locus_tag=CLI86_09240;product=type VI secretion system needle protein Hcp;protein_id=PDP43290.1;transl_table=11 NSLJ01000023.1 Genbank gene 28920 29366 . + . ID=gene-CLI86_09245;Name=CLI86_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09245 NSLJ01000023.1 Protein Homology CDS 28920 29366 . + 0 ID=cds-PDP43291.1;Parent=gene-CLI86_09245;Dbxref=NCBI_GP:PDP43291.1;Name=PDP43291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226308.1;locus_tag=CLI86_09245;product=PH domain protein;protein_id=PDP43291.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 29721 30186 . - . ID=gene-CLI86_09250;Name=CLI86_09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09250;pseudo=true NSLJ01000023.1 Protein Homology CDS 29721 30186 . - 0 ID=cds-CLI86_09250;Parent=gene-CLI86_09250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874645.1;locus_tag=CLI86_09250;product=conjugal transfer protein;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 30199 30777 . - . ID=gene-CLI86_09255;Name=CLI86_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09255 NSLJ01000023.1 Protein Homology CDS 30199 30777 . - 0 ID=cds-PDP43292.1;Parent=gene-CLI86_09255;Dbxref=NCBI_GP:PDP43292.1;Name=PDP43292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226304.1;locus_tag=CLI86_09255;product=conjugal transfer protein TraO;protein_id=PDP43292.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 30771 31112 . - . ID=gene-CLI86_09260;Name=CLI86_09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09260;pseudo=true NSLJ01000023.1 Protein Homology CDS 30771 31112 . - 0 ID=cds-CLI86_09260;Parent=gene-CLI86_09260;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911119.1;locus_tag=CLI86_09260;product=conjugative transposon protein TraN;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 31248 31688 . + . ID=gene-CLI86_09265;Name=CLI86_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09265 NSLJ01000023.1 Protein Homology CDS 31248 31688 . + 0 ID=cds-PDP43303.1;Parent=gene-CLI86_09265;Dbxref=NCBI_GP:PDP43303.1;Name=PDP43303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004056026.1;locus_tag=CLI86_09265;product=hypothetical protein;protein_id=PDP43303.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 32423 32926 . - . ID=gene-CLI86_09270;Name=CLI86_09270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09270;pseudo=true NSLJ01000023.1 Protein Homology CDS 32423 32926 . - 0 ID=cds-CLI86_09270;Parent=gene-CLI86_09270;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004299360.1;locus_tag=CLI86_09270;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 32923 33510 . - . ID=gene-CLI86_09275;Name=CLI86_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09275 NSLJ01000023.1 GeneMarkS+ CDS 32923 33510 . - 0 ID=cds-PDP43293.1;Parent=gene-CLI86_09275;Dbxref=NCBI_GP:PDP43293.1;Name=PDP43293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09275;product=hypothetical protein;protein_id=PDP43293.1;transl_table=11 NSLJ01000023.1 Genbank gene 33507 34055 . - . ID=gene-CLI86_09280;Name=CLI86_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09280 NSLJ01000023.1 GeneMarkS+ CDS 33507 34055 . - 0 ID=cds-PDP43294.1;Parent=gene-CLI86_09280;Dbxref=NCBI_GP:PDP43294.1;Name=PDP43294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09280;product=hypothetical protein;protein_id=PDP43294.1;transl_table=11 NSLJ01000023.1 Genbank gene 34058 35515 . - . ID=gene-CLI86_09285;Name=CLI86_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09285 NSLJ01000023.1 Protein Homology CDS 34058 35515 . - 0 ID=cds-PDP43295.1;Parent=gene-CLI86_09285;Dbxref=NCBI_GP:PDP43295.1;Name=PDP43295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11692.6;locus_tag=CLI86_09285;product=hypothetical protein;protein_id=PDP43295.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 35590 35967 . + . ID=gene-CLI86_09290;Name=CLI86_09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09290;pseudo=true NSLJ01000023.1 Protein Homology CDS 35590 35967 . + 0 ID=cds-CLI86_09290;Parent=gene-CLI86_09290;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI86_09290;product=relaxase;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 35969 37954 . + . ID=gene-CLI86_09295;Name=CLI86_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09295 NSLJ01000023.1 Protein Homology CDS 35969 37954 . + 0 ID=cds-PDP43296.1;Parent=gene-CLI86_09295;Dbxref=NCBI_GP:PDP43296.1;Name=PDP43296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226294.1;locus_tag=CLI86_09295;product=conjugal transfer protein TraG;protein_id=PDP43296.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 38039 39081 . - . ID=gene-CLI86_09300;Name=CLI86_09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09300;pseudo=true NSLJ01000023.1 Protein Homology CDS 38039 39081 . - 0 ID=cds-CLI86_09300;Parent=gene-CLI86_09300;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873637.1;locus_tag=CLI86_09300;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 39417 40796 . + . ID=gene-CLI86_09305;Name=CLI86_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09305 NSLJ01000023.1 Protein Homology CDS 39417 40796 . + 0 ID=cds-PDP43297.1;Parent=gene-CLI86_09305;Dbxref=NCBI_GP:PDP43297.1;Name=PDP43297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816529.1;locus_tag=CLI86_09305;product=radical SAM/SPASM domain-containing protein;protein_id=PDP43297.1;transl_table=11 NSLJ01000023.1 Genbank gene 40808 43153 . + . ID=gene-CLI86_09310;Name=CLI86_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09310 NSLJ01000023.1 Protein Homology CDS 40808 43153 . + 0 ID=cds-PDP43298.1;Parent=gene-CLI86_09310;Dbxref=NCBI_GP:PDP43298.1;Name=PDP43298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14905.4;locus_tag=CLI86_09310;product=hypothetical protein;protein_id=PDP43298.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 43404 44418 . - . ID=gene-CLI86_09315;Name=CLI86_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09315;pseudo=true NSLJ01000023.1 Protein Homology CDS 43404 44418 . - 0 ID=cds-CLI86_09315;Parent=gene-CLI86_09315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226350.1;locus_tag=CLI86_09315;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank pseudogene 44561 46018 . + . ID=gene-CLI86_09320;Name=CLI86_09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09320;pseudo=true NSLJ01000023.1 Protein Homology CDS 44561 46018 . + 0 ID=cds-CLI86_09320;Parent=gene-CLI86_09320;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815644.1;locus_tag=CLI86_09320;product=topoisomerase;pseudo=true;transl_table=11 NSLJ01000023.1 Genbank gene 46015 46209 . + . ID=gene-CLI86_09325;Name=CLI86_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09325 NSLJ01000023.1 Protein Homology CDS 46015 46209 . + 0 ID=cds-PDP43299.1;Parent=gene-CLI86_09325;Dbxref=NCBI_GP:PDP43299.1;Name=PDP43299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956331.1;locus_tag=CLI86_09325;product=DNA-binding protein;protein_id=PDP43299.1;transl_table=11 NSLJ01000023.1 Genbank gene 46266 47591 . - . ID=gene-CLI86_09330;Name=CLI86_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09330 NSLJ01000023.1 Protein Homology CDS 46266 47591 . - 0 ID=cds-PDP43300.1;Parent=gene-CLI86_09330;Dbxref=NCBI_GP:PDP43300.1;Name=PDP43300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874550.1;locus_tag=CLI86_09330;product=ATPase;protein_id=PDP43300.1;transl_table=11 NSLJ01000023.1 Genbank gene 47691 47858 . + . ID=gene-CLI86_09335;Name=CLI86_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09335 NSLJ01000023.1 Protein Homology CDS 47691 47858 . + 0 ID=cds-PDP43304.1;Parent=gene-CLI86_09335;Dbxref=NCBI_GP:PDP43304.1;Name=PDP43304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874676.1;locus_tag=CLI86_09335;product=DNA-binding protein;protein_id=PDP43304.1;transl_table=11 NSLJ01000023.1 Genbank pseudogene 47984 48253 . + . ID=gene-CLI86_09340;Name=CLI86_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09340;pseudo=true NSLJ01000023.1 Protein Homology CDS 47984 48253 . + 0 ID=cds-CLI86_09340;Parent=gene-CLI86_09340;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_09340;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000024.1 1 46729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000024.1 Genbank region 1 46729 . + . ID=NSLJ01000024.1:1..46729;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000024.1 Genbank gene 369 1115 . - . ID=gene-CLI86_09345;Name=CLI86_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09345 NSLJ01000024.1 GeneMarkS+ CDS 369 1115 . - 0 ID=cds-PDP43231.1;Parent=gene-CLI86_09345;Dbxref=NCBI_GP:PDP43231.1;Name=PDP43231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09345;product=hypothetical protein;protein_id=PDP43231.1;transl_table=11 NSLJ01000024.1 Genbank gene 1227 2540 . - . ID=gene-CLI86_09350;Name=CLI86_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09350 NSLJ01000024.1 Protein Homology CDS 1227 2540 . - 0 ID=cds-PDP43232.1;Parent=gene-CLI86_09350;Dbxref=NCBI_GP:PDP43232.1;Name=PDP43232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13568.4;locus_tag=CLI86_09350;product=PorT family protein;protein_id=PDP43232.1;transl_table=11 NSLJ01000024.1 Genbank gene 2561 3082 . - . ID=gene-CLI86_09355;Name=CLI86_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09355 NSLJ01000024.1 Protein Homology CDS 2561 3082 . - 0 ID=cds-PDP43261.1;Parent=gene-CLI86_09355;Dbxref=NCBI_GP:PDP43261.1;Name=PDP43261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226100.1;locus_tag=CLI86_09355;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP43261.1;transl_table=11 NSLJ01000024.1 Genbank gene 3450 4640 . + . ID=gene-CLI86_09360;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CLI86_09360 NSLJ01000024.1 Protein Homology CDS 3450 4640 . + 0 ID=cds-PDP43233.1;Parent=gene-CLI86_09360;Dbxref=NCBI_GP:PDP43233.1;Name=PDP43233.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018710485.1;locus_tag=CLI86_09360;product=glycine C-acetyltransferase;protein_id=PDP43233.1;transl_table=11 NSLJ01000024.1 Genbank gene 4748 5659 . + . ID=gene-CLI86_09365;Name=CLI86_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09365 NSLJ01000024.1 Protein Homology CDS 4748 5659 . + 0 ID=cds-PDP43234.1;Parent=gene-CLI86_09365;Dbxref=NCBI_GP:PDP43234.1;Name=PDP43234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226098.1;locus_tag=CLI86_09365;product=DUF2156 domain-containing protein;protein_id=PDP43234.1;transl_table=11 NSLJ01000024.1 Genbank gene 5656 6507 . + . ID=gene-CLI86_09370;Name=CLI86_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09370 NSLJ01000024.1 Protein Homology CDS 5656 6507 . + 0 ID=cds-PDP43235.1;Parent=gene-CLI86_09370;Dbxref=NCBI_GP:PDP43235.1;Name=PDP43235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13527.5;locus_tag=CLI86_09370;product=GNAT family N-acetyltransferase;protein_id=PDP43235.1;transl_table=11 NSLJ01000024.1 Genbank gene 6719 8602 . - . ID=gene-CLI86_09375;Name=CLI86_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09375 NSLJ01000024.1 Protein Homology CDS 6719 8602 . - 0 ID=cds-PDP43236.1;Parent=gene-CLI86_09375;Dbxref=NCBI_GP:PDP43236.1;Name=PDP43236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226096.1;locus_tag=CLI86_09375;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43236.1;transl_table=11 NSLJ01000024.1 Genbank gene 8616 11732 . - . ID=gene-CLI86_09380;Name=CLI86_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09380 NSLJ01000024.1 Protein Homology CDS 8616 11732 . - 0 ID=cds-PDP43237.1;Parent=gene-CLI86_09380;Dbxref=NCBI_GP:PDP43237.1;Name=PDP43237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226095.1;locus_tag=CLI86_09380;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43237.1;transl_table=11 NSLJ01000024.1 Genbank gene 12104 14257 . - . ID=gene-CLI86_09385;Name=CLI86_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09385 NSLJ01000024.1 GeneMarkS+ CDS 12104 14257 . - 0 ID=cds-PDP43238.1;Parent=gene-CLI86_09385;Dbxref=NCBI_GP:PDP43238.1;Name=PDP43238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09385;product=hypothetical protein;protein_id=PDP43238.1;transl_table=11 NSLJ01000024.1 Genbank gene 14273 15199 . - . ID=gene-CLI86_09390;Name=CLI86_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09390 NSLJ01000024.1 Protein Homology CDS 14273 15199 . - 0 ID=cds-PDP43262.1;Parent=gene-CLI86_09390;Dbxref=NCBI_GP:PDP43262.1;Name=PDP43262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643308.1;locus_tag=CLI86_09390;product=hypothetical protein;protein_id=PDP43262.1;transl_table=11 NSLJ01000024.1 Genbank gene 15230 17107 . - . ID=gene-CLI86_09395;Name=CLI86_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09395 NSLJ01000024.1 Protein Homology CDS 15230 17107 . - 0 ID=cds-PDP43239.1;Parent=gene-CLI86_09395;Dbxref=NCBI_GP:PDP43239.1;Name=PDP43239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643309.1;locus_tag=CLI86_09395;product=serine/threonine protein kinase;protein_id=PDP43239.1;transl_table=11 NSLJ01000024.1 Genbank gene 17188 17955 . - . ID=gene-CLI86_09400;Name=CLI86_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09400 NSLJ01000024.1 Protein Homology CDS 17188 17955 . - 0 ID=cds-PDP43240.1;Parent=gene-CLI86_09400;Dbxref=NCBI_GP:PDP43240.1;Name=PDP43240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772193.1;locus_tag=CLI86_09400;product=serine/threonine-protein phosphatase;protein_id=PDP43240.1;transl_table=11 NSLJ01000024.1 Genbank gene 17975 18481 . - . ID=gene-CLI86_09405;Name=CLI86_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09405 NSLJ01000024.1 Protein Homology CDS 17975 18481 . - 0 ID=cds-PDP43241.1;Parent=gene-CLI86_09405;Dbxref=NCBI_GP:PDP43241.1;Name=PDP43241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643311.1;locus_tag=CLI86_09405;product=hypothetical protein;protein_id=PDP43241.1;transl_table=11 NSLJ01000024.1 Genbank gene 18478 18705 . - . ID=gene-CLI86_09410;Name=CLI86_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09410 NSLJ01000024.1 GeneMarkS+ CDS 18478 18705 . - 0 ID=cds-PDP43242.1;Parent=gene-CLI86_09410;Dbxref=NCBI_GP:PDP43242.1;Name=PDP43242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09410;product=hypothetical protein;protein_id=PDP43242.1;transl_table=11 NSLJ01000024.1 Genbank gene 18831 19490 . - . ID=gene-CLI86_09415;Name=CLI86_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09415 NSLJ01000024.1 Protein Homology CDS 18831 19490 . - 0 ID=cds-PDP43243.1;Parent=gene-CLI86_09415;Dbxref=NCBI_GP:PDP43243.1;Name=PDP43243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226088.1;locus_tag=CLI86_09415;product=ABC transporter ATP-binding protein;protein_id=PDP43243.1;transl_table=11 NSLJ01000024.1 Genbank gene 19487 19876 . - . ID=gene-CLI86_09420;Name=CLI86_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09420 NSLJ01000024.1 Protein Homology CDS 19487 19876 . - 0 ID=cds-PDP43244.1;Parent=gene-CLI86_09420;Dbxref=NCBI_GP:PDP43244.1;Name=PDP43244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008148059.1;locus_tag=CLI86_09420;product=LytTR family transcriptional regulator;protein_id=PDP43244.1;transl_table=11 NSLJ01000024.1 Genbank gene 20045 22765 . - . ID=gene-CLI86_09425;Name=CLI86_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09425 NSLJ01000024.1 Protein Homology CDS 20045 22765 . - 0 ID=cds-PDP43245.1;Parent=gene-CLI86_09425;Dbxref=NCBI_GP:PDP43245.1;Name=PDP43245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809557.1;locus_tag=CLI86_09425;product=pyruvate%2C phosphate dikinase;protein_id=PDP43245.1;transl_table=11 NSLJ01000024.1 Genbank gene 22939 24357 . + . ID=gene-CLI86_09430;Name=CLI86_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09430 NSLJ01000024.1 Protein Homology CDS 22939 24357 . + 0 ID=cds-PDP43246.1;Parent=gene-CLI86_09430;Dbxref=NCBI_GP:PDP43246.1;Name=PDP43246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226085.1;locus_tag=CLI86_09430;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=PDP43246.1;transl_table=11 NSLJ01000024.1 Genbank gene 24350 25756 . + . ID=gene-CLI86_09435;Name=CLI86_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09435 NSLJ01000024.1 Protein Homology CDS 24350 25756 . + 0 ID=cds-PDP43247.1;Parent=gene-CLI86_09435;Dbxref=NCBI_GP:PDP43247.1;Name=PDP43247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226084.1;locus_tag=CLI86_09435;product=lytic transglycosylase F;protein_id=PDP43247.1;transl_table=11 NSLJ01000024.1 Genbank gene 25839 27299 . - . ID=gene-CLI86_09440;Name=CLI86_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09440 NSLJ01000024.1 Protein Homology CDS 25839 27299 . - 0 ID=cds-PDP43248.1;Parent=gene-CLI86_09440;Dbxref=NCBI_GP:PDP43248.1;Name=PDP43248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9%2CHMM:PF14322.4;locus_tag=CLI86_09440;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43248.1;transl_table=11 NSLJ01000024.1 Genbank gene 27312 30461 . - . ID=gene-CLI86_09445;Name=CLI86_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09445 NSLJ01000024.1 Protein Homology CDS 27312 30461 . - 0 ID=cds-PDP43249.1;Parent=gene-CLI86_09445;Dbxref=NCBI_GP:PDP43249.1;Name=PDP43249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_09445;product=hypothetical protein;protein_id=PDP43249.1;transl_table=11 NSLJ01000024.1 Genbank gene 31341 33128 . - . ID=gene-CLI86_09450;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CLI86_09450 NSLJ01000024.1 Protein Homology CDS 31341 33128 . - 0 ID=cds-PDP43250.1;Parent=gene-CLI86_09450;Dbxref=NCBI_GP:PDP43250.1;Name=PDP43250.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008862039.1;locus_tag=CLI86_09450;product=elongation factor 4;protein_id=PDP43250.1;transl_table=11 NSLJ01000024.1 Genbank gene 33217 35355 . + . ID=gene-CLI86_09455;Name=CLI86_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09455 NSLJ01000024.1 Protein Homology CDS 33217 35355 . + 0 ID=cds-PDP43251.1;Parent=gene-CLI86_09455;Dbxref=NCBI_GP:PDP43251.1;Name=PDP43251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226079.1;locus_tag=CLI86_09455;product=hypothetical protein;protein_id=PDP43251.1;transl_table=11 NSLJ01000024.1 Genbank gene 35340 37850 . - . ID=gene-CLI86_09460;Name=CLI86_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09460 NSLJ01000024.1 Protein Homology CDS 35340 37850 . - 0 ID=cds-PDP43252.1;Parent=gene-CLI86_09460;Dbxref=NCBI_GP:PDP43252.1;Name=PDP43252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226078.1;locus_tag=CLI86_09460;product=beta-galactosidase;protein_id=PDP43252.1;transl_table=11 NSLJ01000024.1 Genbank gene 37866 39326 . - . ID=gene-CLI86_09465;Name=CLI86_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09465 NSLJ01000024.1 Protein Homology CDS 37866 39326 . - 0 ID=cds-PDP43253.1;Parent=gene-CLI86_09465;Dbxref=NCBI_GP:PDP43253.1;Name=PDP43253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226077.1;locus_tag=CLI86_09465;product=glucosylceramidase;protein_id=PDP43253.1;transl_table=11 NSLJ01000024.1 Genbank gene 39546 40430 . + . ID=gene-CLI86_09470;Name=CLI86_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09470 NSLJ01000024.1 GeneMarkS+ CDS 39546 40430 . + 0 ID=cds-PDP43254.1;Parent=gene-CLI86_09470;Dbxref=NCBI_GP:PDP43254.1;Name=PDP43254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09470;product=hypothetical protein;protein_id=PDP43254.1;transl_table=11 NSLJ01000024.1 Genbank gene 40476 40898 . + . ID=gene-CLI86_09475;Name=CLI86_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09475 NSLJ01000024.1 Protein Homology CDS 40476 40898 . + 0 ID=cds-PDP43263.1;Parent=gene-CLI86_09475;Dbxref=NCBI_GP:PDP43263.1;Name=PDP43263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226075.1;locus_tag=CLI86_09475;product=hypothetical protein;protein_id=PDP43263.1;transl_table=11 NSLJ01000024.1 Genbank gene 41001 41738 . + . ID=gene-CLI86_09480;Name=CLI86_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09480 NSLJ01000024.1 GeneMarkS+ CDS 41001 41738 . + 0 ID=cds-PDP43255.1;Parent=gene-CLI86_09480;Dbxref=NCBI_GP:PDP43255.1;Name=PDP43255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09480;product=hypothetical protein;protein_id=PDP43255.1;transl_table=11 NSLJ01000024.1 Genbank gene 41776 42264 . + . ID=gene-CLI86_09485;Name=CLI86_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09485 NSLJ01000024.1 GeneMarkS+ CDS 41776 42264 . + 0 ID=cds-PDP43256.1;Parent=gene-CLI86_09485;Dbxref=NCBI_GP:PDP43256.1;Name=PDP43256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09485;product=hypothetical protein;protein_id=PDP43256.1;transl_table=11 NSLJ01000024.1 Genbank gene 42353 43321 . + . ID=gene-CLI86_09490;Name=CLI86_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09490 NSLJ01000024.1 GeneMarkS+ CDS 42353 43321 . + 0 ID=cds-PDP43257.1;Parent=gene-CLI86_09490;Dbxref=NCBI_GP:PDP43257.1;Name=PDP43257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09490;product=hypothetical protein;protein_id=PDP43257.1;transl_table=11 NSLJ01000024.1 Genbank gene 43335 44246 . + . ID=gene-CLI86_09495;Name=CLI86_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09495 NSLJ01000024.1 Protein Homology CDS 43335 44246 . + 0 ID=cds-PDP43258.1;Parent=gene-CLI86_09495;Dbxref=NCBI_GP:PDP43258.1;Name=PDP43258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226071.1;locus_tag=CLI86_09495;product=hypothetical protein;protein_id=PDP43258.1;transl_table=11 NSLJ01000024.1 Genbank gene 44324 45808 . + . ID=gene-CLI86_09500;Name=CLI86_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09500 NSLJ01000024.1 Protein Homology CDS 44324 45808 . + 0 ID=cds-PDP43259.1;Parent=gene-CLI86_09500;Dbxref=NCBI_GP:PDP43259.1;Name=PDP43259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226070.1;locus_tag=CLI86_09500;product=hypothetical protein;protein_id=PDP43259.1;transl_table=11 NSLJ01000024.1 Genbank gene 45898 46605 . + . ID=gene-CLI86_09505;Name=CLI86_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09505 NSLJ01000024.1 GeneMarkS+ CDS 45898 46605 . + 0 ID=cds-PDP43260.1;Parent=gene-CLI86_09505;Dbxref=NCBI_GP:PDP43260.1;Name=PDP43260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09505;product=hypothetical protein;protein_id=PDP43260.1;transl_table=11 ##sequence-region NSLJ01000025.1 1 46495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000025.1 Genbank region 1 46495 . + . ID=NSLJ01000025.1:1..46495;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000025.1 Genbank pseudogene 1 274 . + . ID=gene-CLI86_09510;Name=CLI86_09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09510;pseudo=true NSLJ01000025.1 Protein Homology CDS 1 274 . + 2 ID=cds-CLI86_09510;Parent=gene-CLI86_09510;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225861.1;locus_tag=CLI86_09510;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000025.1 Genbank gene 295 1968 . + . ID=gene-CLI86_09515;Name=CLI86_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09515 NSLJ01000025.1 Protein Homology CDS 295 1968 . + 0 ID=cds-PDP43200.1;Parent=gene-CLI86_09515;Dbxref=NCBI_GP:PDP43200.1;Name=PDP43200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007367251.1;locus_tag=CLI86_09515;product=hypothetical protein;protein_id=PDP43200.1;transl_table=11 NSLJ01000025.1 Genbank gene 2095 2532 . + . ID=gene-CLI86_09520;Name=CLI86_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09520 NSLJ01000025.1 GeneMarkS+ CDS 2095 2532 . + 0 ID=cds-PDP43201.1;Parent=gene-CLI86_09520;Dbxref=NCBI_GP:PDP43201.1;Name=PDP43201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09520;product=hypothetical protein;protein_id=PDP43201.1;transl_table=11 NSLJ01000025.1 Genbank gene 2594 2667 . - . ID=gene-CLI86_09525;Name=CLI86_09525;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_09525 NSLJ01000025.1 tRNAscan-SE tRNA 2594 2667 . - . ID=rna-CLI86_09525;Parent=gene-CLI86_09525;anticodon=(pos:complement(2631..2633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09525;product=tRNA-His NSLJ01000025.1 tRNAscan-SE exon 2594 2667 . - . ID=exon-CLI86_09525-1;Parent=rna-CLI86_09525;anticodon=(pos:complement(2631..2633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09525;product=tRNA-His NSLJ01000025.1 Genbank gene 3636 4550 . + . ID=gene-CLI86_09530;Name=CLI86_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09530 NSLJ01000025.1 Protein Homology CDS 3636 4550 . + 0 ID=cds-PDP43202.1;Parent=gene-CLI86_09530;Dbxref=NCBI_GP:PDP43202.1;Name=PDP43202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009126756.1;locus_tag=CLI86_09530;product=N-acetylneuraminate lyase;protein_id=PDP43202.1;transl_table=11 NSLJ01000025.1 Genbank gene 4556 5734 . + . ID=gene-CLI86_09535;Name=CLI86_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09535 NSLJ01000025.1 Protein Homology CDS 4556 5734 . + 0 ID=cds-PDP43221.1;Parent=gene-CLI86_09535;Dbxref=NCBI_GP:PDP43221.1;Name=PDP43221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225506.1;locus_tag=CLI86_09535;product=N-acylglucosamine 2-epimerase;protein_id=PDP43221.1;transl_table=11 NSLJ01000025.1 Genbank gene 5759 7003 . + . ID=gene-CLI86_09540;Name=CLI86_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09540 NSLJ01000025.1 Protein Homology CDS 5759 7003 . + 0 ID=cds-PDP43222.1;Parent=gene-CLI86_09540;Dbxref=NCBI_GP:PDP43222.1;Name=PDP43222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860494.1;locus_tag=CLI86_09540;product=MFS transporter;protein_id=PDP43222.1;transl_table=11 NSLJ01000025.1 Genbank gene 7036 10419 . + . ID=gene-CLI86_09545;Name=CLI86_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09545 NSLJ01000025.1 Protein Homology CDS 7036 10419 . + 0 ID=cds-PDP43203.1;Parent=gene-CLI86_09545;Dbxref=NCBI_GP:PDP43203.1;Name=PDP43203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008143903.1;locus_tag=CLI86_09545;product=SusC/RagA family protein;protein_id=PDP43203.1;transl_table=11 NSLJ01000025.1 Genbank gene 10450 12018 . + . ID=gene-CLI86_09550;Name=CLI86_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09550 NSLJ01000025.1 Protein Homology CDS 10450 12018 . + 0 ID=cds-PDP43223.1;Parent=gene-CLI86_09550;Dbxref=NCBI_GP:PDP43223.1;Name=PDP43223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005676456.1;locus_tag=CLI86_09550;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43223.1;transl_table=11 NSLJ01000025.1 Genbank gene 12099 13718 . + . ID=gene-CLI86_09555;Name=CLI86_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09555 NSLJ01000025.1 Protein Homology CDS 12099 13718 . + 0 ID=cds-PDP43204.1;Parent=gene-CLI86_09555;Dbxref=NCBI_GP:PDP43204.1;Name=PDP43204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225510.1;locus_tag=CLI86_09555;product=sialidase;protein_id=PDP43204.1;transl_table=11 NSLJ01000025.1 Genbank gene 13715 15712 . + . ID=gene-CLI86_09560;Name=CLI86_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09560 NSLJ01000025.1 Protein Homology CDS 13715 15712 . + 0 ID=cds-PDP43205.1;Parent=gene-CLI86_09560;Dbxref=NCBI_GP:PDP43205.1;Name=PDP43205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225511.1;locus_tag=CLI86_09560;product=beta-N-acetylhexosaminidase;protein_id=PDP43205.1;transl_table=11 NSLJ01000025.1 Genbank gene 15730 17808 . + . ID=gene-CLI86_09565;Name=CLI86_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09565 NSLJ01000025.1 Protein Homology CDS 15730 17808 . + 0 ID=cds-PDP43206.1;Parent=gene-CLI86_09565;Dbxref=NCBI_GP:PDP43206.1;Name=PDP43206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225512.1;locus_tag=CLI86_09565;product=sialate O-acetylesterase;protein_id=PDP43206.1;transl_table=11 NSLJ01000025.1 Genbank gene 17816 19030 . + . ID=gene-CLI86_09570;Name=CLI86_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09570 NSLJ01000025.1 Protein Homology CDS 17816 19030 . + 0 ID=cds-PDP43224.1;Parent=gene-CLI86_09570;Dbxref=NCBI_GP:PDP43224.1;Name=PDP43224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225513.1;locus_tag=CLI86_09570;product=cyclically-permuted mutarotase family protein;protein_id=PDP43224.1;transl_table=11 NSLJ01000025.1 Genbank gene 19298 20770 . - . ID=gene-CLI86_09575;Name=CLI86_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09575 NSLJ01000025.1 Protein Homology CDS 19298 20770 . - 0 ID=cds-PDP43207.1;Parent=gene-CLI86_09575;Dbxref=NCBI_GP:PDP43207.1;Name=PDP43207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225514.1;locus_tag=CLI86_09575;product=peptidase;protein_id=PDP43207.1;transl_table=11 NSLJ01000025.1 Genbank gene 20784 21266 . - . ID=gene-CLI86_09580;Name=CLI86_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09580 NSLJ01000025.1 GeneMarkS+ CDS 20784 21266 . - 0 ID=cds-PDP43208.1;Parent=gene-CLI86_09580;Dbxref=NCBI_GP:PDP43208.1;Name=PDP43208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09580;product=hypothetical protein;protein_id=PDP43208.1;transl_table=11 NSLJ01000025.1 Genbank gene 21309 23651 . - . ID=gene-CLI86_09585;Name=CLI86_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09585 NSLJ01000025.1 Protein Homology CDS 21309 23651 . - 0 ID=cds-PDP43209.1;Parent=gene-CLI86_09585;Dbxref=NCBI_GP:PDP43209.1;Name=PDP43209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005777984.1;locus_tag=CLI86_09585;product=TonB-dependent receptor;protein_id=PDP43209.1;transl_table=11 NSLJ01000025.1 Genbank gene 23717 24652 . - . ID=gene-CLI86_09590;Name=CLI86_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09590 NSLJ01000025.1 Protein Homology CDS 23717 24652 . - 0 ID=cds-PDP43210.1;Parent=gene-CLI86_09590;Dbxref=NCBI_GP:PDP43210.1;Name=PDP43210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225517.1;locus_tag=CLI86_09590;product=sirohydrochlorin cobaltochelatase;protein_id=PDP43210.1;transl_table=11 NSLJ01000025.1 Genbank gene 24753 26216 . - . ID=gene-CLI86_09595;Name=CLI86_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09595 NSLJ01000025.1 Protein Homology CDS 24753 26216 . - 0 ID=cds-PDP43211.1;Parent=gene-CLI86_09595;Dbxref=NCBI_GP:PDP43211.1;Name=PDP43211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225518.1;locus_tag=CLI86_09595;product=hypothetical protein;protein_id=PDP43211.1;transl_table=11 NSLJ01000025.1 Genbank gene 26230 27504 . - . ID=gene-CLI86_09600;Name=CLI86_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09600 NSLJ01000025.1 Protein Homology CDS 26230 27504 . - 0 ID=cds-PDP43212.1;Parent=gene-CLI86_09600;Dbxref=NCBI_GP:PDP43212.1;Name=PDP43212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225519.1;locus_tag=CLI86_09600;product=hypothetical protein;protein_id=PDP43212.1;transl_table=11 NSLJ01000025.1 Genbank gene 27522 29882 . - . ID=gene-CLI86_09605;Name=CLI86_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09605 NSLJ01000025.1 Protein Homology CDS 27522 29882 . - 0 ID=cds-PDP43213.1;Parent=gene-CLI86_09605;Dbxref=NCBI_GP:PDP43213.1;Name=PDP43213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225520.1;locus_tag=CLI86_09605;product=TonB-dependent receptor;protein_id=PDP43213.1;transl_table=11 NSLJ01000025.1 cmsearch riboswitch 30008 30204 . - . ID=id-NSLJ01000025.1:30008..30204;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000025.1 Genbank gene 30625 31599 . + . ID=gene-CLI86_09610;Name=CLI86_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09610 NSLJ01000025.1 Protein Homology CDS 30625 31599 . + 0 ID=cds-PDP43225.1;Parent=gene-CLI86_09610;Dbxref=NCBI_GP:PDP43225.1;Name=PDP43225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009276535.1;locus_tag=CLI86_09610;product=thiamine biosynthesis protein ApbE;protein_id=PDP43225.1;transl_table=11 NSLJ01000025.1 Genbank gene 31944 32951 . - . ID=gene-CLI86_09615;Name=CLI86_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09615 NSLJ01000025.1 Protein Homology CDS 31944 32951 . - 0 ID=cds-PDP43214.1;Parent=gene-CLI86_09615;Dbxref=NCBI_GP:PDP43214.1;Name=PDP43214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225524.1;locus_tag=CLI86_09615;product=metallophosphatase;protein_id=PDP43214.1;transl_table=11 NSLJ01000025.1 Genbank gene 33144 35168 . + . ID=gene-CLI86_09620;Name=CLI86_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09620 NSLJ01000025.1 Protein Homology CDS 33144 35168 . + 0 ID=cds-PDP43226.1;Parent=gene-CLI86_09620;Dbxref=NCBI_GP:PDP43226.1;Name=PDP43226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225526.1;locus_tag=CLI86_09620;product=HDIG domain-containing protein;protein_id=PDP43226.1;transl_table=11 NSLJ01000025.1 Genbank gene 35715 36281 . + . ID=gene-CLI86_09625;Name=CLI86_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09625 NSLJ01000025.1 Protein Homology CDS 35715 36281 . + 0 ID=cds-PDP43215.1;Parent=gene-CLI86_09625;Dbxref=NCBI_GP:PDP43215.1;Name=PDP43215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225529.1;locus_tag=CLI86_09625;product=flavodoxin;protein_id=PDP43215.1;transl_table=11 NSLJ01000025.1 Genbank pseudogene 36634 37148 . + . ID=gene-CLI86_09630;Name=CLI86_09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09630;pseudo=true NSLJ01000025.1 Protein Homology CDS 36634 37148 . + 0 ID=cds-CLI86_09630;Parent=gene-CLI86_09630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358726.1;locus_tag=CLI86_09630;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000025.1 Genbank pseudogene 37161 38437 . + . ID=gene-CLI86_09635;Name=CLI86_09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09635;pseudo=true NSLJ01000025.1 Protein Homology CDS 37161 38437 . + 0 ID=cds-CLI86_09635;Parent=gene-CLI86_09635;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358727.1;locus_tag=CLI86_09635;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000025.1 Genbank gene 39233 39544 . + . ID=gene-CLI86_09640;Name=CLI86_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09640 NSLJ01000025.1 Protein Homology CDS 39233 39544 . + 0 ID=cds-PDP43216.1;Parent=gene-CLI86_09640;Dbxref=NCBI_GP:PDP43216.1;Name=PDP43216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14055.4;locus_tag=CLI86_09640;product=hypothetical protein;protein_id=PDP43216.1;transl_table=11 NSLJ01000025.1 Genbank gene 39572 40687 . + . ID=gene-CLI86_09645;Name=CLI86_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09645 NSLJ01000025.1 Protein Homology CDS 39572 40687 . + 0 ID=cds-PDP43217.1;Parent=gene-CLI86_09645;Dbxref=NCBI_GP:PDP43217.1;Name=PDP43217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_09645;product=6-bladed beta-propeller;protein_id=PDP43217.1;transl_table=11 NSLJ01000025.1 Genbank gene 40731 42827 . - . ID=gene-CLI86_09650;Name=CLI86_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09650 NSLJ01000025.1 Protein Homology CDS 40731 42827 . - 0 ID=cds-PDP43218.1;Parent=gene-CLI86_09650;Dbxref=NCBI_GP:PDP43218.1;Name=PDP43218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04932.13;locus_tag=CLI86_09650;product=hypothetical protein;protein_id=PDP43218.1;transl_table=11 NSLJ01000025.1 Genbank gene 42814 44001 . - . ID=gene-CLI86_09655;Name=CLI86_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09655 NSLJ01000025.1 Protein Homology CDS 42814 44001 . - 0 ID=cds-PDP43219.1;Parent=gene-CLI86_09655;Dbxref=NCBI_GP:PDP43219.1;Name=PDP43219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225537.1;locus_tag=CLI86_09655;product=hypothetical protein;protein_id=PDP43219.1;transl_table=11 NSLJ01000025.1 Genbank gene 44008 46311 . - . ID=gene-CLI86_09660;Name=CLI86_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09660 NSLJ01000025.1 Protein Homology CDS 44008 46311 . - 0 ID=cds-PDP43220.1;Parent=gene-CLI86_09660;Dbxref=NCBI_GP:PDP43220.1;Name=PDP43220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_09660;product=hypothetical protein;protein_id=PDP43220.1;transl_table=11 ##sequence-region NSLJ01000026.1 1 44626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000026.1 Genbank region 1 44626 . + . ID=NSLJ01000026.1:1..44626;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000026.1 Genbank gene 214 897 . - . ID=gene-CLI86_09665;Name=CLI86_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09665 NSLJ01000026.1 Protein Homology CDS 214 897 . - 0 ID=cds-PDP43161.1;Parent=gene-CLI86_09665;Dbxref=NCBI_GP:PDP43161.1;Name=PDP43161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224321.1;locus_tag=CLI86_09665;product=two-component system response regulator;protein_id=PDP43161.1;transl_table=11 NSLJ01000026.1 Genbank gene 894 2351 . - . ID=gene-CLI86_09670;Name=CLI86_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09670 NSLJ01000026.1 Protein Homology CDS 894 2351 . - 0 ID=cds-PDP43162.1;Parent=gene-CLI86_09670;Dbxref=NCBI_GP:PDP43162.1;Name=PDP43162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224320.1;locus_tag=CLI86_09670;product=sensor histidine kinase;protein_id=PDP43162.1;transl_table=11 NSLJ01000026.1 Genbank gene 2524 3408 . + . ID=gene-CLI86_09675;Name=CLI86_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09675 NSLJ01000026.1 Protein Homology CDS 2524 3408 . + 0 ID=cds-PDP43163.1;Parent=gene-CLI86_09675;Dbxref=NCBI_GP:PDP43163.1;Name=PDP43163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224318.1;locus_tag=CLI86_09675;product=GLPGLI family protein;protein_id=PDP43163.1;transl_table=11 NSLJ01000026.1 Genbank gene 3420 6008 . + . ID=gene-CLI86_09680;Name=CLI86_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09680 NSLJ01000026.1 Protein Homology CDS 3420 6008 . + 0 ID=cds-PDP43164.1;Parent=gene-CLI86_09680;Dbxref=NCBI_GP:PDP43164.1;Name=PDP43164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224317.1;locus_tag=CLI86_09680;product=hypothetical protein;protein_id=PDP43164.1;transl_table=11 NSLJ01000026.1 Genbank gene 6134 7105 . - . ID=gene-CLI86_09685;Name=CLI86_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09685 NSLJ01000026.1 Protein Homology CDS 6134 7105 . - 0 ID=cds-PDP43165.1;Parent=gene-CLI86_09685;Dbxref=NCBI_GP:PDP43165.1;Name=PDP43165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224315.1;locus_tag=CLI86_09685;product=iron dicitrate transport regulator FecR;protein_id=PDP43165.1;transl_table=11 NSLJ01000026.1 Genbank gene 7179 7757 . - . ID=gene-CLI86_09690;Name=CLI86_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09690 NSLJ01000026.1 Protein Homology CDS 7179 7757 . - 0 ID=cds-PDP43166.1;Parent=gene-CLI86_09690;Dbxref=NCBI_GP:PDP43166.1;Name=PDP43166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224314.1;locus_tag=CLI86_09690;product=RNA polymerase sigma-70 factor;protein_id=PDP43166.1;transl_table=11 NSLJ01000026.1 Genbank gene 7842 10613 . - . ID=gene-CLI86_09695;Name=CLI86_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09695 NSLJ01000026.1 Protein Homology CDS 7842 10613 . - 0 ID=cds-PDP43167.1;Parent=gene-CLI86_09695;Dbxref=NCBI_GP:PDP43167.1;Name=PDP43167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224313.1;locus_tag=CLI86_09695;product=peptidase S9;protein_id=PDP43167.1;transl_table=11 NSLJ01000026.1 Genbank gene 10963 12015 . + . ID=gene-CLI86_09700;Name=CLI86_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09700 NSLJ01000026.1 Protein Homology CDS 10963 12015 . + 0 ID=cds-PDP43168.1;Parent=gene-CLI86_09700;Dbxref=NCBI_GP:PDP43168.1;Name=PDP43168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13884.4;locus_tag=CLI86_09700;product=hypothetical protein;protein_id=PDP43168.1;transl_table=11 NSLJ01000026.1 Genbank gene 12025 12522 . + . ID=gene-CLI86_09705;Name=CLI86_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09705 NSLJ01000026.1 Protein Homology CDS 12025 12522 . + 0 ID=cds-PDP43169.1;Parent=gene-CLI86_09705;Dbxref=NCBI_GP:PDP43169.1;Name=PDP43169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224311.1;locus_tag=CLI86_09705;product=hypothetical protein;protein_id=PDP43169.1;transl_table=11 NSLJ01000026.1 Genbank gene 12637 13134 . + . ID=gene-CLI86_09710;Name=CLI86_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09710 NSLJ01000026.1 Protein Homology CDS 12637 13134 . + 0 ID=cds-PDP43170.1;Parent=gene-CLI86_09710;Dbxref=NCBI_GP:PDP43170.1;Name=PDP43170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224309.1;locus_tag=CLI86_09710;product=hypothetical protein;protein_id=PDP43170.1;transl_table=11 NSLJ01000026.1 Genbank gene 13249 13746 . + . ID=gene-CLI86_09715;Name=CLI86_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09715 NSLJ01000026.1 Protein Homology CDS 13249 13746 . + 0 ID=cds-PDP43171.1;Parent=gene-CLI86_09715;Dbxref=NCBI_GP:PDP43171.1;Name=PDP43171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224309.1;locus_tag=CLI86_09715;product=hypothetical protein;protein_id=PDP43171.1;transl_table=11 NSLJ01000026.1 Genbank gene 13739 15529 . + . ID=gene-CLI86_09720;Name=CLI86_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09720 NSLJ01000026.1 Protein Homology CDS 13739 15529 . + 0 ID=cds-PDP43172.1;Parent=gene-CLI86_09720;Dbxref=NCBI_GP:PDP43172.1;Name=PDP43172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05057.12;locus_tag=CLI86_09720;product=hypothetical protein;protein_id=PDP43172.1;transl_table=11 NSLJ01000026.1 Genbank gene 15559 16119 . + . ID=gene-CLI86_09725;Name=CLI86_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09725 NSLJ01000026.1 GeneMarkS+ CDS 15559 16119 . + 0 ID=cds-PDP43173.1;Parent=gene-CLI86_09725;Dbxref=NCBI_GP:PDP43173.1;Name=PDP43173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09725;product=hypothetical protein;protein_id=PDP43173.1;transl_table=11 NSLJ01000026.1 Genbank gene 16097 17095 . + . ID=gene-CLI86_09730;Name=CLI86_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09730 NSLJ01000026.1 Protein Homology CDS 16097 17095 . + 0 ID=cds-PDP43174.1;Parent=gene-CLI86_09730;Dbxref=NCBI_GP:PDP43174.1;Name=PDP43174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_09730;product=hypothetical protein;protein_id=PDP43174.1;transl_table=11 NSLJ01000026.1 Genbank gene 17319 18290 . - . ID=gene-CLI86_09735;Name=CLI86_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09735 NSLJ01000026.1 GeneMarkS+ CDS 17319 18290 . - 0 ID=cds-PDP43175.1;Parent=gene-CLI86_09735;Dbxref=NCBI_GP:PDP43175.1;Name=PDP43175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09735;product=hypothetical protein;protein_id=PDP43175.1;transl_table=11 NSLJ01000026.1 Genbank gene 18287 18856 . - . ID=gene-CLI86_09740;Name=CLI86_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09740 NSLJ01000026.1 GeneMarkS+ CDS 18287 18856 . - 0 ID=cds-PDP43176.1;Parent=gene-CLI86_09740;Dbxref=NCBI_GP:PDP43176.1;Name=PDP43176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09740;product=hypothetical protein;protein_id=PDP43176.1;transl_table=11 NSLJ01000026.1 Genbank gene 18853 19395 . - . ID=gene-CLI86_09745;Name=CLI86_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09745 NSLJ01000026.1 Protein Homology CDS 18853 19395 . - 0 ID=cds-PDP43177.1;Parent=gene-CLI86_09745;Dbxref=NCBI_GP:PDP43177.1;Name=PDP43177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937;locus_tag=CLI86_09745;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP43177.1;transl_table=11 NSLJ01000026.1 Genbank gene 19615 20037 . + . ID=gene-CLI86_09750;Name=CLI86_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09750 NSLJ01000026.1 GeneMarkS+ CDS 19615 20037 . + 0 ID=cds-PDP43178.1;Parent=gene-CLI86_09750;Dbxref=NCBI_GP:PDP43178.1;Name=PDP43178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09750;product=hypothetical protein;protein_id=PDP43178.1;transl_table=11 NSLJ01000026.1 Genbank gene 20071 21585 . - . ID=gene-CLI86_09755;Name=CLI86_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09755 NSLJ01000026.1 Protein Homology CDS 20071 21585 . - 0 ID=cds-PDP43179.1;Parent=gene-CLI86_09755;Dbxref=NCBI_GP:PDP43179.1;Name=PDP43179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860689.1;locus_tag=CLI86_09755;product=hypothetical protein;protein_id=PDP43179.1;transl_table=11 NSLJ01000026.1 Genbank gene 21661 23001 . - . ID=gene-CLI86_09760;Name=CLI86_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09760 NSLJ01000026.1 Protein Homology CDS 21661 23001 . - 0 ID=cds-PDP43180.1;Parent=gene-CLI86_09760;Dbxref=NCBI_GP:PDP43180.1;Name=PDP43180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224302.1;locus_tag=CLI86_09760;product=hypothetical protein;protein_id=PDP43180.1;transl_table=11 NSLJ01000026.1 Genbank gene 23208 24071 . + . ID=gene-CLI86_09765;Name=CLI86_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09765 NSLJ01000026.1 Protein Homology CDS 23208 24071 . + 0 ID=cds-PDP43181.1;Parent=gene-CLI86_09765;Dbxref=NCBI_GP:PDP43181.1;Name=PDP43181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01694.20;locus_tag=CLI86_09765;product=rhomboid family intramembrane serine protease;protein_id=PDP43181.1;transl_table=11 NSLJ01000026.1 Genbank gene 24065 24997 . + . ID=gene-CLI86_09770;Name=CLI86_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09770 NSLJ01000026.1 Protein Homology CDS 24065 24997 . + 0 ID=cds-PDP43182.1;Parent=gene-CLI86_09770;Dbxref=NCBI_GP:PDP43182.1;Name=PDP43182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224280.1;locus_tag=CLI86_09770;product=aspartate carbamoyltransferase;protein_id=PDP43182.1;transl_table=11 NSLJ01000026.1 Genbank gene 25010 25477 . + . ID=gene-CLI86_09775;Name=CLI86_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09775 NSLJ01000026.1 Protein Homology CDS 25010 25477 . + 0 ID=cds-PDP43183.1;Parent=gene-CLI86_09775;Dbxref=NCBI_GP:PDP43183.1;Name=PDP43183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224279.1;locus_tag=CLI86_09775;product=aspartate carbamoyltransferase regulatory subunit;protein_id=PDP43183.1;transl_table=11 NSLJ01000026.1 Genbank gene 25526 26092 . + . ID=gene-CLI86_09780;Name=CLI86_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09780 NSLJ01000026.1 Protein Homology CDS 25526 26092 . + 0 ID=cds-PDP43184.1;Parent=gene-CLI86_09780;Dbxref=NCBI_GP:PDP43184.1;Name=PDP43184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013616717.1;locus_tag=CLI86_09780;product=flavin reductase family protein;protein_id=PDP43184.1;transl_table=11 NSLJ01000026.1 Genbank gene 26097 26822 . + . ID=gene-CLI86_09785;Name=CLI86_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09785 NSLJ01000026.1 Protein Homology CDS 26097 26822 . + 0 ID=cds-PDP43185.1;Parent=gene-CLI86_09785;Dbxref=NCBI_GP:PDP43185.1;Name=PDP43185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13568.4;locus_tag=CLI86_09785;product=PorT family protein;protein_id=PDP43185.1;transl_table=11 NSLJ01000026.1 Genbank gene 26846 31216 . - . ID=gene-CLI86_09790;Name=CLI86_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09790 NSLJ01000026.1 Protein Homology CDS 26846 31216 . - 0 ID=cds-PDP43186.1;Parent=gene-CLI86_09790;Dbxref=NCBI_GP:PDP43186.1;Name=PDP43186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224276.1;locus_tag=CLI86_09790;product=DUF490 domain-containing protein;protein_id=PDP43186.1;transl_table=11 NSLJ01000026.1 Genbank gene 31408 32436 . + . ID=gene-CLI86_09795;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CLI86_09795 NSLJ01000026.1 Protein Homology CDS 31408 32436 . + 0 ID=cds-PDP43187.1;Parent=gene-CLI86_09795;Dbxref=NCBI_GP:PDP43187.1;Name=PDP43187.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224275.1;locus_tag=CLI86_09795;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=PDP43187.1;transl_table=11 NSLJ01000026.1 Genbank gene 32469 33719 . + . ID=gene-CLI86_09800;Name=CLI86_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09800 NSLJ01000026.1 Protein Homology CDS 32469 33719 . + 0 ID=cds-PDP43188.1;Parent=gene-CLI86_09800;Dbxref=NCBI_GP:PDP43188.1;Name=PDP43188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009319563.1;locus_tag=CLI86_09800;product=competence/damage-inducible protein A;protein_id=PDP43188.1;transl_table=11 NSLJ01000026.1 Genbank gene 33771 34718 . + . ID=gene-CLI86_09805;Name=CLI86_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09805 NSLJ01000026.1 Protein Homology CDS 33771 34718 . + 0 ID=cds-PDP43189.1;Parent=gene-CLI86_09805;Dbxref=NCBI_GP:PDP43189.1;Name=PDP43189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224273.1;locus_tag=CLI86_09805;product=homoserine O-succinyltransferase;protein_id=PDP43189.1;transl_table=11 NSLJ01000026.1 Genbank gene 34722 36545 . + . ID=gene-CLI86_09810;Name=CLI86_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09810 NSLJ01000026.1 Protein Homology CDS 34722 36545 . + 0 ID=cds-PDP43195.1;Parent=gene-CLI86_09810;Dbxref=NCBI_GP:PDP43195.1;Name=PDP43195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780331.1;locus_tag=CLI86_09810;product=collagenase-like protease;protein_id=PDP43195.1;transl_table=11 NSLJ01000026.1 Genbank gene 36581 40270 . - . ID=gene-CLI86_09815;Name=CLI86_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09815 NSLJ01000026.1 Protein Homology CDS 36581 40270 . - 0 ID=cds-PDP43190.1;Parent=gene-CLI86_09815;Dbxref=NCBI_GP:PDP43190.1;Name=PDP43190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224271.1;locus_tag=CLI86_09815;product=methionine synthase;protein_id=PDP43190.1;transl_table=11 NSLJ01000026.1 Genbank gene 40352 42646 . + . ID=gene-CLI86_09820;Name=CLI86_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09820 NSLJ01000026.1 Protein Homology CDS 40352 42646 . + 0 ID=cds-PDP43191.1;Parent=gene-CLI86_09820;Dbxref=NCBI_GP:PDP43191.1;Name=PDP43191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224270.1;locus_tag=CLI86_09820;product=cation/H(+) antiporter;protein_id=PDP43191.1;transl_table=11 NSLJ01000026.1 Genbank gene 42716 43126 . - . ID=gene-CLI86_09825;Name=CLI86_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09825 NSLJ01000026.1 GeneMarkS+ CDS 42716 43126 . - 0 ID=cds-PDP43192.1;Parent=gene-CLI86_09825;Dbxref=NCBI_GP:PDP43192.1;Name=PDP43192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09825;product=hypothetical protein;protein_id=PDP43192.1;transl_table=11 NSLJ01000026.1 Genbank gene 43317 43595 . - . ID=gene-CLI86_09830;Name=CLI86_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09830 NSLJ01000026.1 Protein Homology CDS 43317 43595 . - 0 ID=cds-PDP43193.1;Parent=gene-CLI86_09830;Dbxref=NCBI_GP:PDP43193.1;Name=PDP43193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224269.1;locus_tag=CLI86_09830;product=type II toxin-antitoxin system YafQ family toxin;protein_id=PDP43193.1;transl_table=11 NSLJ01000026.1 Genbank gene 43595 43795 . - . ID=gene-CLI86_09835;Name=CLI86_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09835 NSLJ01000026.1 Protein Homology CDS 43595 43795 . - 0 ID=cds-PDP43194.1;Parent=gene-CLI86_09835;Dbxref=NCBI_GP:PDP43194.1;Name=PDP43194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224268.1;locus_tag=CLI86_09835;product=hypothetical protein;protein_id=PDP43194.1;transl_table=11 ##sequence-region NSLJ01000027.1 1 44225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000027.1 Genbank region 1 44225 . + . ID=NSLJ01000027.1:1..44225;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000027.1 Genbank gene 1 995 . + . ID=gene-CLI86_09840;Name=CLI86_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09840;partial=true;start_range=.,1 NSLJ01000027.1 Protein Homology CDS 1 995 . + 2 ID=cds-PDP43129.1;Parent=gene-CLI86_09840;Dbxref=NCBI_GP:PDP43129.1;Name=PDP43129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01548.15;locus_tag=CLI86_09840;partial=true;product=IS110 family transposase;protein_id=PDP43129.1;start_range=.,1;transl_table=11 NSLJ01000027.1 Genbank gene 1338 1661 . - . ID=gene-CLI86_09845;Name=CLI86_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09845 NSLJ01000027.1 Protein Homology CDS 1338 1661 . - 0 ID=cds-PDP43130.1;Parent=gene-CLI86_09845;Dbxref=NCBI_GP:PDP43130.1;Name=PDP43130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860107.1;locus_tag=CLI86_09845;product=L-rhamnose mutarotase;protein_id=PDP43130.1;transl_table=11 NSLJ01000027.1 Genbank gene 1853 2551 . + . ID=gene-CLI86_09850;Name=CLI86_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09850 NSLJ01000027.1 Protein Homology CDS 1853 2551 . + 0 ID=cds-PDP43131.1;Parent=gene-CLI86_09850;Dbxref=NCBI_GP:PDP43131.1;Name=PDP43131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709565.1;locus_tag=CLI86_09850;product=hypothetical protein;protein_id=PDP43131.1;transl_table=11 NSLJ01000027.1 Genbank gene 2557 3246 . + . ID=gene-CLI86_09855;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CLI86_09855 NSLJ01000027.1 Protein Homology CDS 2557 3246 . + 0 ID=cds-PDP43132.1;Parent=gene-CLI86_09855;Dbxref=NCBI_GP:PDP43132.1;Name=PDP43132.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810479.1;locus_tag=CLI86_09855;product=7-cyano-7-deazaguanine synthase QueC;protein_id=PDP43132.1;transl_table=11 NSLJ01000027.1 Genbank gene 3243 4148 . - . ID=gene-CLI86_09860;Name=CLI86_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09860 NSLJ01000027.1 Protein Homology CDS 3243 4148 . - 0 ID=cds-PDP43133.1;Parent=gene-CLI86_09860;Dbxref=NCBI_GP:PDP43133.1;Name=PDP43133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225670.1;locus_tag=CLI86_09860;product=cation-efflux pump;protein_id=PDP43133.1;transl_table=11 NSLJ01000027.1 Genbank gene 4183 5511 . - . ID=gene-CLI86_09865;Name=CLI86_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09865 NSLJ01000027.1 Protein Homology CDS 4183 5511 . - 0 ID=cds-PDP43134.1;Parent=gene-CLI86_09865;Dbxref=NCBI_GP:PDP43134.1;Name=PDP43134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857480.1;locus_tag=CLI86_09865;product=ribonuclease;protein_id=PDP43134.1;transl_table=11 NSLJ01000027.1 Genbank gene 5742 7052 . + . ID=gene-CLI86_09870;Name=CLI86_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09870 NSLJ01000027.1 Protein Homology CDS 5742 7052 . + 0 ID=cds-PDP43135.1;Parent=gene-CLI86_09870;Dbxref=NCBI_GP:PDP43135.1;Name=PDP43135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225668.1;locus_tag=CLI86_09870;product=dihydrofolate synthase;protein_id=PDP43135.1;transl_table=11 NSLJ01000027.1 Genbank gene 7073 8728 . + . ID=gene-CLI86_09875;Name=CLI86_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09875 NSLJ01000027.1 Protein Homology CDS 7073 8728 . + 0 ID=cds-PDP43136.1;Parent=gene-CLI86_09875;Dbxref=NCBI_GP:PDP43136.1;Name=PDP43136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225667.1;locus_tag=CLI86_09875;product=MFS transporter;protein_id=PDP43136.1;transl_table=11 NSLJ01000027.1 Genbank gene 8764 9708 . + . ID=gene-CLI86_09880;Name=CLI86_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09880 NSLJ01000027.1 Protein Homology CDS 8764 9708 . + 0 ID=cds-PDP43137.1;Parent=gene-CLI86_09880;Dbxref=NCBI_GP:PDP43137.1;Name=PDP43137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225666.1;locus_tag=CLI86_09880;product=nitronate monooxygenase;protein_id=PDP43137.1;transl_table=11 NSLJ01000027.1 Genbank pseudogene 9790 10380 . - . ID=gene-CLI86_09885;Name=CLI86_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_09885;pseudo=true NSLJ01000027.1 Protein Homology CDS 9790 10380 . - 0 ID=cds-CLI86_09885;Parent=gene-CLI86_09885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318180.1;locus_tag=CLI86_09885;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000027.1 Genbank gene 10809 12653 . - . ID=gene-CLI86_09890;Name=CLI86_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09890 NSLJ01000027.1 Protein Homology CDS 10809 12653 . - 0 ID=cds-PDP43138.1;Parent=gene-CLI86_09890;Dbxref=NCBI_GP:PDP43138.1;Name=PDP43138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013546149.1;locus_tag=CLI86_09890;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP43138.1;transl_table=11 NSLJ01000027.1 Genbank gene 12665 16090 . - . ID=gene-CLI86_09895;Name=CLI86_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09895 NSLJ01000027.1 Protein Homology CDS 12665 16090 . - 0 ID=cds-PDP43139.1;Parent=gene-CLI86_09895;Dbxref=NCBI_GP:PDP43139.1;Name=PDP43139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014299558.1;locus_tag=CLI86_09895;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP43139.1;transl_table=11 NSLJ01000027.1 Genbank gene 16142 16330 . - . ID=gene-CLI86_09900;Name=CLI86_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09900 NSLJ01000027.1 GeneMarkS+ CDS 16142 16330 . - 0 ID=cds-PDP43140.1;Parent=gene-CLI86_09900;Dbxref=NCBI_GP:PDP43140.1;Name=PDP43140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09900;product=hypothetical protein;protein_id=PDP43140.1;transl_table=11 NSLJ01000027.1 Genbank gene 16559 23767 . - . ID=gene-CLI86_09905;Name=CLI86_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09905 NSLJ01000027.1 Protein Homology CDS 16559 23767 . - 0 ID=cds-PDP43141.1;Parent=gene-CLI86_09905;Dbxref=NCBI_GP:PDP43141.1;Name=PDP43141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09479.8%2CHMM:TIGR02543;locus_tag=CLI86_09905;product=hypothetical protein;protein_id=PDP43141.1;transl_table=11 NSLJ01000027.1 Genbank gene 23815 24201 . - . ID=gene-CLI86_09910;Name=CLI86_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09910 NSLJ01000027.1 GeneMarkS+ CDS 23815 24201 . - 0 ID=cds-PDP43142.1;Parent=gene-CLI86_09910;Dbxref=NCBI_GP:PDP43142.1;Name=PDP43142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09910;product=hypothetical protein;protein_id=PDP43142.1;transl_table=11 NSLJ01000027.1 Genbank gene 25126 25199 . - . ID=gene-CLI86_09915;Name=CLI86_09915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_09915 NSLJ01000027.1 tRNAscan-SE tRNA 25126 25199 . - . ID=rna-CLI86_09915;Parent=gene-CLI86_09915;anticodon=(pos:complement(25165..25167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09915;product=tRNA-Gln NSLJ01000027.1 tRNAscan-SE exon 25126 25199 . - . ID=exon-CLI86_09915-1;Parent=rna-CLI86_09915;anticodon=(pos:complement(25165..25167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_09915;product=tRNA-Gln NSLJ01000027.1 Genbank gene 25313 25672 . + . ID=gene-CLI86_09920;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CLI86_09920 NSLJ01000027.1 Protein Homology CDS 25313 25672 . + 0 ID=cds-PDP43155.1;Parent=gene-CLI86_09920;Dbxref=NCBI_GP:PDP43155.1;Name=PDP43155.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658988.1;locus_tag=CLI86_09920;product=ribosome silencing factor;protein_id=PDP43155.1;transl_table=11 NSLJ01000027.1 Genbank gene 25696 27696 . + . ID=gene-CLI86_09925;Name=CLI86_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09925 NSLJ01000027.1 Protein Homology CDS 25696 27696 . + 0 ID=cds-PDP43143.1;Parent=gene-CLI86_09925;Dbxref=NCBI_GP:PDP43143.1;Name=PDP43143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225655.1;locus_tag=CLI86_09925;product=cell division protein FtsH;protein_id=PDP43143.1;transl_table=11 NSLJ01000027.1 Genbank gene 27712 28563 . + . ID=gene-CLI86_09930;Name=CLI86_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09930 NSLJ01000027.1 Protein Homology CDS 27712 28563 . + 0 ID=cds-PDP43144.1;Parent=gene-CLI86_09930;Dbxref=NCBI_GP:PDP43144.1;Name=PDP43144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864948.1;locus_tag=CLI86_09930;product=phosphatidate cytidylyltransferase;protein_id=PDP43144.1;transl_table=11 NSLJ01000027.1 Genbank gene 28550 29245 . - . ID=gene-CLI86_09935;Name=CLI86_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09935 NSLJ01000027.1 Protein Homology CDS 28550 29245 . - 0 ID=cds-PDP43145.1;Parent=gene-CLI86_09935;Dbxref=NCBI_GP:PDP43145.1;Name=PDP43145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225653.1;locus_tag=CLI86_09935;product=PorT family protein;protein_id=PDP43145.1;transl_table=11 NSLJ01000027.1 Genbank gene 29404 29574 . + . ID=gene-CLI86_09940;Name=CLI86_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09940 NSLJ01000027.1 Protein Homology CDS 29404 29574 . + 0 ID=cds-PDP43146.1;Parent=gene-CLI86_09940;Dbxref=NCBI_GP:PDP43146.1;Name=PDP43146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658993.1;locus_tag=CLI86_09940;product=4Fe-4S ferredoxin;protein_id=PDP43146.1;transl_table=11 NSLJ01000027.1 Genbank gene 29991 32528 . + . ID=gene-CLI86_09945;Name=CLI86_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09945 NSLJ01000027.1 Protein Homology CDS 29991 32528 . + 0 ID=cds-PDP43147.1;Parent=gene-CLI86_09945;Dbxref=NCBI_GP:PDP43147.1;Name=PDP43147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145408.1;locus_tag=CLI86_09945;product=ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent;protein_id=PDP43147.1;transl_table=11 NSLJ01000027.1 Genbank gene 32547 35240 . + . ID=gene-CLI86_09950;Name=CLI86_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09950 NSLJ01000027.1 Protein Homology CDS 32547 35240 . + 0 ID=cds-PDP43148.1;Parent=gene-CLI86_09950;Dbxref=NCBI_GP:PDP43148.1;Name=PDP43148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865486.1;locus_tag=CLI86_09950;product=4-alpha-glucanotransferase;protein_id=PDP43148.1;transl_table=11 NSLJ01000027.1 Genbank gene 35233 35652 . - . ID=gene-CLI86_09955;Name=CLI86_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09955 NSLJ01000027.1 Protein Homology CDS 35233 35652 . - 0 ID=cds-PDP43149.1;Parent=gene-CLI86_09955;Dbxref=NCBI_GP:PDP43149.1;Name=PDP43149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225649.1;locus_tag=CLI86_09955;product=hypothetical protein;protein_id=PDP43149.1;transl_table=11 NSLJ01000027.1 Genbank gene 35741 36097 . + . ID=gene-CLI86_09960;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CLI86_09960 NSLJ01000027.1 Protein Homology CDS 35741 36097 . + 0 ID=cds-PDP43150.1;Parent=gene-CLI86_09960;Dbxref=NCBI_GP:PDP43150.1;Name=PDP43150.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654144.1;locus_tag=CLI86_09960;product=dihydroneopterin aldolase;protein_id=PDP43150.1;transl_table=11 NSLJ01000027.1 Genbank gene 36272 36544 . - . ID=gene-CLI86_09965;Name=CLI86_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09965 NSLJ01000027.1 Protein Homology CDS 36272 36544 . - 0 ID=cds-PDP43156.1;Parent=gene-CLI86_09965;Dbxref=NCBI_GP:PDP43156.1;Name=PDP43156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154292.1;locus_tag=CLI86_09965;product=HU family DNA-binding protein;protein_id=PDP43156.1;transl_table=11 NSLJ01000027.1 Genbank gene 37023 39317 . + . ID=gene-CLI86_09970;Name=CLI86_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09970 NSLJ01000027.1 Protein Homology CDS 37023 39317 . + 0 ID=cds-PDP43151.1;Parent=gene-CLI86_09970;Dbxref=NCBI_GP:PDP43151.1;Name=PDP43151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225646.1;locus_tag=CLI86_09970;product=ATP-dependent DNA helicase;protein_id=PDP43151.1;transl_table=11 NSLJ01000027.1 Genbank gene 39322 40458 . + . ID=gene-CLI86_09975;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=CLI86_09975 NSLJ01000027.1 Protein Homology CDS 39322 40458 . + 0 ID=cds-PDP43152.1;Parent=gene-CLI86_09975;Dbxref=NCBI_GP:PDP43152.1;Name=PDP43152.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225645.1;locus_tag=CLI86_09975;product=carboxynorspermidine decarboxylase;protein_id=PDP43152.1;transl_table=11 NSLJ01000027.1 Genbank gene 41111 43312 . + . ID=gene-CLI86_09980;Name=CLI86_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09980 NSLJ01000027.1 Protein Homology CDS 41111 43312 . + 0 ID=cds-PDP43153.1;Parent=gene-CLI86_09980;Dbxref=NCBI_GP:PDP43153.1;Name=PDP43153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225643.1;locus_tag=CLI86_09980;product=sodium-translocating pyrophosphatase;protein_id=PDP43153.1;transl_table=11 NSLJ01000027.1 Genbank gene 43577 44101 . - . ID=gene-CLI86_09985;Name=CLI86_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09985 NSLJ01000027.1 Protein Homology CDS 43577 44101 . - 0 ID=cds-PDP43154.1;Parent=gene-CLI86_09985;Dbxref=NCBI_GP:PDP43154.1;Name=PDP43154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225642.1;locus_tag=CLI86_09985;product=ferritin;protein_id=PDP43154.1;transl_table=11 ##sequence-region NSLJ01000028.1 1 43905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000028.1 Genbank region 1 43905 . + . ID=NSLJ01000028.1:1..43905;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000028.1 Genbank gene 1 182 . + . ID=gene-CLI86_09990;Name=CLI86_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_09990;partial=true;start_range=.,1 NSLJ01000028.1 GeneMarkS+ CDS 1 182 . + 2 ID=cds-PDP43078.1;Parent=gene-CLI86_09990;Dbxref=NCBI_GP:PDP43078.1;Name=PDP43078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_09990;partial=true;product=T9SS C-terminal target domain-containing protein;protein_id=PDP43078.1;start_range=.,1;transl_table=11 NSLJ01000028.1 Genbank gene 377 1528 . - . ID=gene-CLI86_09995;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CLI86_09995 NSLJ01000028.1 Protein Homology CDS 377 1528 . - 0 ID=cds-PDP43079.1;Parent=gene-CLI86_09995;Dbxref=NCBI_GP:PDP43079.1;Name=PDP43079.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856657.1;locus_tag=CLI86_09995;product=molecular chaperone DnaJ;protein_id=PDP43079.1;transl_table=11 NSLJ01000028.1 Genbank gene 1556 2167 . - . ID=gene-CLI86_10000;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CLI86_10000 NSLJ01000028.1 Protein Homology CDS 1556 2167 . - 0 ID=cds-PDP43080.1;Parent=gene-CLI86_10000;Dbxref=NCBI_GP:PDP43080.1;Name=PDP43080.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223707.1;locus_tag=CLI86_10000;product=nucleotide exchange factor GrpE;protein_id=PDP43080.1;transl_table=11 NSLJ01000028.1 Genbank gene 2388 3809 . + . ID=gene-CLI86_10005;Name=CLI86_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10005 NSLJ01000028.1 Protein Homology CDS 2388 3809 . + 0 ID=cds-PDP43081.1;Parent=gene-CLI86_10005;Dbxref=NCBI_GP:PDP43081.1;Name=PDP43081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223708.1;locus_tag=CLI86_10005;product=signal protein PDZ;protein_id=PDP43081.1;transl_table=11 NSLJ01000028.1 Genbank gene 3833 6313 . + . ID=gene-CLI86_10010;Name=CLI86_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10010 NSLJ01000028.1 Protein Homology CDS 3833 6313 . + 0 ID=cds-PDP43120.1;Parent=gene-CLI86_10010;Dbxref=NCBI_GP:PDP43120.1;Name=PDP43120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005862081.1;locus_tag=CLI86_10010;product=endonuclease MutS2;protein_id=PDP43120.1;transl_table=11 NSLJ01000028.1 Genbank gene 6412 7389 . - . ID=gene-CLI86_10015;Name=CLI86_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10015 NSLJ01000028.1 Protein Homology CDS 6412 7389 . - 0 ID=cds-PDP43082.1;Parent=gene-CLI86_10015;Dbxref=NCBI_GP:PDP43082.1;Name=PDP43082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223711.1;locus_tag=CLI86_10015;product=diguanylate cyclase;protein_id=PDP43082.1;transl_table=11 NSLJ01000028.1 Genbank gene 7474 8139 . - . ID=gene-CLI86_10020;Name=CLI86_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10020 NSLJ01000028.1 Protein Homology CDS 7474 8139 . - 0 ID=cds-PDP43083.1;Parent=gene-CLI86_10020;Dbxref=NCBI_GP:PDP43083.1;Name=PDP43083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017753.1;locus_tag=CLI86_10020;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=PDP43083.1;transl_table=11 NSLJ01000028.1 Genbank gene 8136 8609 . - . ID=gene-CLI86_10025;Name=CLI86_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10025 NSLJ01000028.1 Protein Homology CDS 8136 8609 . - 0 ID=cds-PDP43084.1;Parent=gene-CLI86_10025;Dbxref=NCBI_GP:PDP43084.1;Name=PDP43084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223713.1;locus_tag=CLI86_10025;product=DUF4494 domain-containing protein;protein_id=PDP43084.1;transl_table=11 NSLJ01000028.1 Genbank gene 8618 9154 . - . ID=gene-CLI86_10030;Name=CLI86_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10030 NSLJ01000028.1 Protein Homology CDS 8618 9154 . - 0 ID=cds-PDP43085.1;Parent=gene-CLI86_10030;Dbxref=NCBI_GP:PDP43085.1;Name=PDP43085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223714.1;locus_tag=CLI86_10030;product=N-acetyltransferase;protein_id=PDP43085.1;transl_table=11 NSLJ01000028.1 Genbank gene 9596 9799 . + . ID=gene-CLI86_10035;Name=CLI86_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10035 NSLJ01000028.1 GeneMarkS+ CDS 9596 9799 . + 0 ID=cds-PDP43086.1;Parent=gene-CLI86_10035;Dbxref=NCBI_GP:PDP43086.1;Name=PDP43086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10035;product=hypothetical protein;protein_id=PDP43086.1;transl_table=11 NSLJ01000028.1 Genbank gene 9811 9883 . + . ID=gene-CLI86_10040;Name=CLI86_10040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10040 NSLJ01000028.1 tRNAscan-SE tRNA 9811 9883 . + . ID=rna-CLI86_10040;Parent=gene-CLI86_10040;anticodon=(pos:9844..9846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10040;product=tRNA-Gly NSLJ01000028.1 tRNAscan-SE exon 9811 9883 . + . ID=exon-CLI86_10040-1;Parent=rna-CLI86_10040;anticodon=(pos:9844..9846);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10040;product=tRNA-Gly NSLJ01000028.1 Genbank gene 9901 9986 . + . ID=gene-CLI86_10045;Name=CLI86_10045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10045 NSLJ01000028.1 tRNAscan-SE tRNA 9901 9986 . + . ID=rna-CLI86_10045;Parent=gene-CLI86_10045;anticodon=(pos:9935..9937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10045;product=tRNA-Leu NSLJ01000028.1 tRNAscan-SE exon 9901 9986 . + . ID=exon-CLI86_10045-1;Parent=rna-CLI86_10045;anticodon=(pos:9935..9937);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10045;product=tRNA-Leu NSLJ01000028.1 Genbank gene 10176 11279 . + . ID=gene-CLI86_10050;Name=CLI86_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10050 NSLJ01000028.1 GeneMarkS+ CDS 10176 11279 . + 0 ID=cds-PDP43087.1;Parent=gene-CLI86_10050;Dbxref=NCBI_GP:PDP43087.1;Name=PDP43087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10050;product=hypothetical protein;protein_id=PDP43087.1;transl_table=11 NSLJ01000028.1 Genbank gene 11782 15129 . - . ID=gene-CLI86_10055;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CLI86_10055 NSLJ01000028.1 Protein Homology CDS 11782 15129 . - 0 ID=cds-PDP43088.1;Parent=gene-CLI86_10055;Dbxref=NCBI_GP:PDP43088.1;Name=PDP43088.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223718.1;locus_tag=CLI86_10055;product=transcription-repair coupling factor;protein_id=PDP43088.1;transl_table=11 NSLJ01000028.1 Genbank gene 15213 16919 . - . ID=gene-CLI86_10060;Name=CLI86_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10060 NSLJ01000028.1 Protein Homology CDS 15213 16919 . - 0 ID=cds-PDP43089.1;Parent=gene-CLI86_10060;Dbxref=NCBI_GP:PDP43089.1;Name=PDP43089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855553.1;locus_tag=CLI86_10060;product=acyl-CoA dehydrogenase;protein_id=PDP43089.1;transl_table=11 NSLJ01000028.1 Genbank gene 16928 17947 . - . ID=gene-CLI86_10065;Name=CLI86_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10065 NSLJ01000028.1 Protein Homology CDS 16928 17947 . - 0 ID=cds-PDP43090.1;Parent=gene-CLI86_10065;Dbxref=NCBI_GP:PDP43090.1;Name=PDP43090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007566960.1;locus_tag=CLI86_10065;product=electron transfer flavoprotein subunit alpha;protein_id=PDP43090.1;transl_table=11 NSLJ01000028.1 Genbank gene 17966 18172 . - . ID=gene-CLI86_10070;Name=CLI86_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10070 NSLJ01000028.1 GeneMarkS+ CDS 17966 18172 . - 0 ID=cds-PDP43091.1;Parent=gene-CLI86_10070;Dbxref=NCBI_GP:PDP43091.1;Name=PDP43091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10070;product=hypothetical protein;protein_id=PDP43091.1;transl_table=11 NSLJ01000028.1 Genbank gene 18215 19102 . - . ID=gene-CLI86_10075;Name=CLI86_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10075 NSLJ01000028.1 Protein Homology CDS 18215 19102 . - 0 ID=cds-PDP43092.1;Parent=gene-CLI86_10075;Dbxref=NCBI_GP:PDP43092.1;Name=PDP43092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145074.1;locus_tag=CLI86_10075;product=electron transfer flavoprotein subunit beta;protein_id=PDP43092.1;transl_table=11 NSLJ01000028.1 Genbank gene 19520 20326 . - . ID=gene-CLI86_10080;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CLI86_10080 NSLJ01000028.1 Protein Homology CDS 19520 20326 . - 0 ID=cds-PDP43093.1;Parent=gene-CLI86_10080;Dbxref=NCBI_GP:PDP43093.1;Name=PDP43093.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223723.1;locus_tag=CLI86_10080;product=3-deoxy-8-phosphooctulonate synthase;protein_id=PDP43093.1;transl_table=11 NSLJ01000028.1 Genbank gene 20353 21270 . - . ID=gene-CLI86_10085;Name=CLI86_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10085 NSLJ01000028.1 Protein Homology CDS 20353 21270 . - 0 ID=cds-PDP43094.1;Parent=gene-CLI86_10085;Dbxref=NCBI_GP:PDP43094.1;Name=PDP43094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223724.1;locus_tag=CLI86_10085;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP43094.1;transl_table=11 NSLJ01000028.1 Genbank gene 21350 21562 . - . ID=gene-CLI86_10090;Name=CLI86_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10090 NSLJ01000028.1 GeneMarkS+ CDS 21350 21562 . - 0 ID=cds-PDP43095.1;Parent=gene-CLI86_10090;Dbxref=NCBI_GP:PDP43095.1;Name=PDP43095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10090;product=hypothetical protein;protein_id=PDP43095.1;transl_table=11 NSLJ01000028.1 Genbank gene 21854 22864 . - . ID=gene-CLI86_10095;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CLI86_10095 NSLJ01000028.1 Protein Homology CDS 21854 22864 . - 0 ID=cds-PDP43096.1;Parent=gene-CLI86_10095;Dbxref=NCBI_GP:PDP43096.1;Name=PDP43096.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223728.1;locus_tag=CLI86_10095;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=PDP43096.1;transl_table=11 NSLJ01000028.1 Genbank gene 23115 23429 . - . ID=gene-CLI86_10100;Name=CLI86_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10100 NSLJ01000028.1 GeneMarkS+ CDS 23115 23429 . - 0 ID=cds-PDP43097.1;Parent=gene-CLI86_10100;Dbxref=NCBI_GP:PDP43097.1;Name=PDP43097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10100;product=hypothetical protein;protein_id=PDP43097.1;transl_table=11 NSLJ01000028.1 Genbank gene 23461 23862 . - . ID=gene-CLI86_10105;Name=CLI86_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10105 NSLJ01000028.1 Protein Homology CDS 23461 23862 . - 0 ID=cds-PDP43098.1;Parent=gene-CLI86_10105;Dbxref=NCBI_GP:PDP43098.1;Name=PDP43098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223731.1;locus_tag=CLI86_10105;product=hypothetical protein;protein_id=PDP43098.1;transl_table=11 NSLJ01000028.1 Genbank gene 23877 24116 . - . ID=gene-CLI86_10110;Name=CLI86_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10110 NSLJ01000028.1 Protein Homology CDS 23877 24116 . - 0 ID=cds-PDP43099.1;Parent=gene-CLI86_10110;Dbxref=NCBI_GP:PDP43099.1;Name=PDP43099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641080.1;locus_tag=CLI86_10110;product=YtxH domain-containing protein;protein_id=PDP43099.1;transl_table=11 NSLJ01000028.1 Genbank gene 24218 25072 . - . ID=gene-CLI86_10115;Name=CLI86_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10115 NSLJ01000028.1 Protein Homology CDS 24218 25072 . - 0 ID=cds-PDP43100.1;Parent=gene-CLI86_10115;Dbxref=NCBI_GP:PDP43100.1;Name=PDP43100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223733.1;locus_tag=CLI86_10115;product=50S ribosomal protein L11 methyltransferase;protein_id=PDP43100.1;transl_table=11 NSLJ01000028.1 Genbank gene 25481 25663 . + . ID=gene-CLI86_10120;Name=CLI86_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10120 NSLJ01000028.1 GeneMarkS+ CDS 25481 25663 . + 0 ID=cds-PDP43101.1;Parent=gene-CLI86_10120;Dbxref=NCBI_GP:PDP43101.1;Name=PDP43101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10120;product=hypothetical protein;protein_id=PDP43101.1;transl_table=11 NSLJ01000028.1 Genbank gene 25693 25887 . - . ID=gene-CLI86_10125;Name=CLI86_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10125 NSLJ01000028.1 Protein Homology CDS 25693 25887 . - 0 ID=cds-PDP43121.1;Parent=gene-CLI86_10125;Dbxref=NCBI_GP:PDP43121.1;Name=PDP43121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364076.1;locus_tag=CLI86_10125;product=hypothetical protein;protein_id=PDP43121.1;transl_table=11 NSLJ01000028.1 Genbank gene 25874 26485 . - . ID=gene-CLI86_10130;Name=CLI86_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10130 NSLJ01000028.1 Protein Homology CDS 25874 26485 . - 0 ID=cds-PDP43102.1;Parent=gene-CLI86_10130;Dbxref=NCBI_GP:PDP43102.1;Name=PDP43102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=CLI86_10130;product=hypothetical protein;protein_id=PDP43102.1;transl_table=11 NSLJ01000028.1 Genbank gene 26482 28392 . - . ID=gene-CLI86_10135;Name=CLI86_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10135 NSLJ01000028.1 Protein Homology CDS 26482 28392 . - 0 ID=cds-PDP43103.1;Parent=gene-CLI86_10135;Dbxref=NCBI_GP:PDP43103.1;Name=PDP43103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02518.24%2CHMM:PF13424.4;locus_tag=CLI86_10135;product=hypothetical protein;protein_id=PDP43103.1;transl_table=11 NSLJ01000028.1 Genbank gene 28495 29763 . - . ID=gene-CLI86_10140;Name=CLI86_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10140 NSLJ01000028.1 Protein Homology CDS 28495 29763 . - 0 ID=cds-PDP43104.1;Parent=gene-CLI86_10140;Dbxref=NCBI_GP:PDP43104.1;Name=PDP43104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272253.1;locus_tag=CLI86_10140;product=AAA family ATPase;protein_id=PDP43104.1;transl_table=11 NSLJ01000028.1 Genbank gene 29770 30846 . - . ID=gene-CLI86_10145;Name=CLI86_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10145 NSLJ01000028.1 Protein Homology CDS 29770 30846 . - 0 ID=cds-PDP43122.1;Parent=gene-CLI86_10145;Dbxref=NCBI_GP:PDP43122.1;Name=PDP43122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009015517.1;locus_tag=CLI86_10145;product=DUF1016 domain-containing protein;protein_id=PDP43122.1;transl_table=11 NSLJ01000028.1 Genbank gene 31069 32544 . + . ID=gene-CLI86_10150;Name=CLI86_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10150 NSLJ01000028.1 Protein Homology CDS 31069 32544 . + 0 ID=cds-PDP43105.1;Parent=gene-CLI86_10150;Dbxref=NCBI_GP:PDP43105.1;Name=PDP43105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09479.8;locus_tag=CLI86_10150;product=hypothetical protein;protein_id=PDP43105.1;transl_table=11 NSLJ01000028.1 Genbank gene 32578 33744 . + . ID=gene-CLI86_10155;Name=CLI86_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10155 NSLJ01000028.1 Protein Homology CDS 32578 33744 . + 0 ID=cds-PDP43106.1;Parent=gene-CLI86_10155;Dbxref=NCBI_GP:PDP43106.1;Name=PDP43106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07603.9%2CHMM:PF09479.8;locus_tag=CLI86_10155;product=hypothetical protein;protein_id=PDP43106.1;transl_table=11 NSLJ01000028.1 Genbank gene 33922 34395 . + . ID=gene-CLI86_10160;Name=CLI86_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10160 NSLJ01000028.1 Protein Homology CDS 33922 34395 . + 0 ID=cds-PDP43107.1;Parent=gene-CLI86_10160;Dbxref=NCBI_GP:PDP43107.1;Name=PDP43107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358139.1;locus_tag=CLI86_10160;product=histidinol phosphate phosphatase;protein_id=PDP43107.1;transl_table=11 NSLJ01000028.1 Genbank gene 34538 34936 . + . ID=gene-CLI86_10165;Name=CLI86_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10165 NSLJ01000028.1 GeneMarkS+ CDS 34538 34936 . + 0 ID=cds-PDP43108.1;Parent=gene-CLI86_10165;Dbxref=NCBI_GP:PDP43108.1;Name=PDP43108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10165;product=hypothetical protein;protein_id=PDP43108.1;transl_table=11 NSLJ01000028.1 Genbank gene 34978 35538 . + . ID=gene-CLI86_10170;Name=CLI86_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10170 NSLJ01000028.1 GeneMarkS+ CDS 34978 35538 . + 0 ID=cds-PDP43109.1;Parent=gene-CLI86_10170;Dbxref=NCBI_GP:PDP43109.1;Name=PDP43109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10170;product=hypothetical protein;protein_id=PDP43109.1;transl_table=11 NSLJ01000028.1 Genbank gene 35595 36605 . + . ID=gene-CLI86_10175;Name=CLI86_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10175 NSLJ01000028.1 Protein Homology CDS 35595 36605 . + 0 ID=cds-PDP43110.1;Parent=gene-CLI86_10175;Dbxref=NCBI_GP:PDP43110.1;Name=PDP43110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223743.1;locus_tag=CLI86_10175;product=DUF805 domain-containing protein;protein_id=PDP43110.1;transl_table=11 NSLJ01000028.1 Genbank gene 36614 37843 . + . ID=gene-CLI86_10180;Name=CLI86_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10180 NSLJ01000028.1 GeneMarkS+ CDS 36614 37843 . + 0 ID=cds-PDP43111.1;Parent=gene-CLI86_10180;Dbxref=NCBI_GP:PDP43111.1;Name=PDP43111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10180;product=hypothetical protein;protein_id=PDP43111.1;transl_table=11 NSLJ01000028.1 Genbank gene 37874 38557 . + . ID=gene-CLI86_10185;Name=CLI86_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10185 NSLJ01000028.1 Protein Homology CDS 37874 38557 . + 0 ID=cds-PDP43112.1;Parent=gene-CLI86_10185;Dbxref=NCBI_GP:PDP43112.1;Name=PDP43112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13505.4;locus_tag=CLI86_10185;product=PorT family protein;protein_id=PDP43112.1;transl_table=11 NSLJ01000028.1 Genbank gene 38629 38895 . + . ID=gene-CLI86_10190;Name=CLI86_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10190 NSLJ01000028.1 Protein Homology CDS 38629 38895 . + 0 ID=cds-PDP43113.1;Parent=gene-CLI86_10190;Dbxref=NCBI_GP:PDP43113.1;Name=PDP43113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347204.1;locus_tag=CLI86_10190;product=ribosome biogenesis protein;protein_id=PDP43113.1;transl_table=11 NSLJ01000028.1 Genbank gene 38918 39244 . + . ID=gene-CLI86_10195;Name=CLI86_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10195 NSLJ01000028.1 Protein Homology CDS 38918 39244 . + 0 ID=cds-PDP43114.1;Parent=gene-CLI86_10195;Dbxref=NCBI_GP:PDP43114.1;Name=PDP43114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366603.1;locus_tag=CLI86_10195;product=RteC protein;protein_id=PDP43114.1;transl_table=11 NSLJ01000028.1 Genbank gene 39351 40022 . - . ID=gene-CLI86_10200;Name=CLI86_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10200 NSLJ01000028.1 Protein Homology CDS 39351 40022 . - 0 ID=cds-PDP43123.1;Parent=gene-CLI86_10200;Dbxref=NCBI_GP:PDP43123.1;Name=PDP43123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347043.1;locus_tag=CLI86_10200;product=NYN domain-containing protein;protein_id=PDP43123.1;transl_table=11 NSLJ01000028.1 Genbank gene 40185 40331 . - . ID=gene-CLI86_10205;Name=CLI86_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10205 NSLJ01000028.1 Protein Homology CDS 40185 40331 . - 0 ID=cds-PDP43115.1;Parent=gene-CLI86_10205;Dbxref=NCBI_GP:PDP43115.1;Name=PDP43115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584322.1;locus_tag=CLI86_10205;product=permease of the drug/metabolite transporter;protein_id=PDP43115.1;transl_table=11 NSLJ01000028.1 Genbank gene 40490 41083 . - . ID=gene-CLI86_10210;Name=CLI86_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10210 NSLJ01000028.1 Protein Homology CDS 40490 41083 . - 0 ID=cds-PDP43116.1;Parent=gene-CLI86_10210;Dbxref=NCBI_GP:PDP43116.1;Name=PDP43116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005852827.1;locus_tag=CLI86_10210;product=hypothetical protein;protein_id=PDP43116.1;transl_table=11 NSLJ01000028.1 Genbank gene 41105 42139 . - . ID=gene-CLI86_10215;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CLI86_10215 NSLJ01000028.1 Protein Homology CDS 41105 42139 . - 0 ID=cds-PDP43124.1;Parent=gene-CLI86_10215;Dbxref=NCBI_GP:PDP43124.1;Name=PDP43124.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584830.1;locus_tag=CLI86_10215;product=UDP-glucose 4-epimerase GalE;protein_id=PDP43124.1;transl_table=11 NSLJ01000028.1 Genbank gene 42312 42467 . - . ID=gene-CLI86_10220;Name=CLI86_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10220 NSLJ01000028.1 Protein Homology CDS 42312 42467 . - 0 ID=cds-PDP43117.1;Parent=gene-CLI86_10220;Dbxref=NCBI_GP:PDP43117.1;Name=PDP43117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005638125.1;locus_tag=CLI86_10220;product=DUF4295 domain-containing protein;protein_id=PDP43117.1;transl_table=11 NSLJ01000028.1 Genbank gene 42493 42681 . - . ID=gene-CLI86_10225;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CLI86_10225 NSLJ01000028.1 Protein Homology CDS 42493 42681 . - 0 ID=cds-PDP43118.1;Parent=gene-CLI86_10225;Dbxref=NCBI_GP:PDP43118.1;Name=PDP43118.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809828.1;locus_tag=CLI86_10225;product=50S ribosomal protein L33;protein_id=PDP43118.1;transl_table=11 NSLJ01000028.1 Genbank gene 42706 42945 . - . ID=gene-CLI86_10230;Name=CLI86_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10230 NSLJ01000028.1 Protein Homology CDS 42706 42945 . - 0 ID=cds-PDP43119.1;Parent=gene-CLI86_10230;Dbxref=NCBI_GP:PDP43119.1;Name=PDP43119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857630.1;locus_tag=CLI86_10230;product=50S ribosomal protein L28;protein_id=PDP43119.1;transl_table=11 NSLJ01000028.1 Genbank gene 43064 43147 . - . ID=gene-CLI86_10235;Name=CLI86_10235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10235 NSLJ01000028.1 tRNAscan-SE tRNA 43064 43147 . - . ID=rna-CLI86_10235;Parent=gene-CLI86_10235;anticodon=(pos:complement(43111..43113));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10235;product=tRNA-Leu NSLJ01000028.1 tRNAscan-SE exon 43064 43147 . - . ID=exon-CLI86_10235-1;Parent=rna-CLI86_10235;anticodon=(pos:complement(43111..43113));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10235;product=tRNA-Leu NSLJ01000028.1 Genbank gene 43157 43241 . - . ID=gene-CLI86_10240;Name=CLI86_10240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10240 NSLJ01000028.1 tRNAscan-SE tRNA 43157 43241 . - . ID=rna-CLI86_10240;Parent=gene-CLI86_10240;anticodon=(pos:complement(43205..43207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10240;product=tRNA-Leu NSLJ01000028.1 tRNAscan-SE exon 43157 43241 . - . ID=exon-CLI86_10240-1;Parent=rna-CLI86_10240;anticodon=(pos:complement(43205..43207));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10240;product=tRNA-Leu NSLJ01000028.1 Genbank gene 43364 43436 . - . ID=gene-CLI86_10245;Name=CLI86_10245;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10245 NSLJ01000028.1 tRNAscan-SE tRNA 43364 43436 . - . ID=rna-CLI86_10245;Parent=gene-CLI86_10245;anticodon=(pos:complement(43401..43403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10245;product=tRNA-Gly NSLJ01000028.1 tRNAscan-SE exon 43364 43436 . - . ID=exon-CLI86_10245-1;Parent=rna-CLI86_10245;anticodon=(pos:complement(43401..43403));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10245;product=tRNA-Gly ##sequence-region NSLJ01000029.1 1 43773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000029.1 Genbank region 1 43773 . + . ID=NSLJ01000029.1:1..43773;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000029.1 Genbank gene 1 140 . + . ID=gene-CLI86_10250;Name=CLI86_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10250;partial=true;start_range=.,1 NSLJ01000029.1 Protein Homology CDS 1 140 . + 2 ID=cds-PDP43044.1;Parent=gene-CLI86_10250;Dbxref=NCBI_GP:PDP43044.1;Name=PDP43044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224395.1;locus_tag=CLI86_10250;partial=true;product=mannose-6-phosphate isomerase;protein_id=PDP43044.1;start_range=.,1;transl_table=11 NSLJ01000029.1 Genbank gene 285 1181 . + . ID=gene-CLI86_10255;Name=CLI86_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10255 NSLJ01000029.1 Protein Homology CDS 285 1181 . + 0 ID=cds-PDP43045.1;Parent=gene-CLI86_10255;Dbxref=NCBI_GP:PDP43045.1;Name=PDP43045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224249.1;locus_tag=CLI86_10255;product=ABC transporter ATP-binding protein;protein_id=PDP43045.1;transl_table=11 NSLJ01000029.1 Genbank gene 1206 4565 . + . ID=gene-CLI86_10260;Name=CLI86_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10260 NSLJ01000029.1 Protein Homology CDS 1206 4565 . + 0 ID=cds-PDP43046.1;Parent=gene-CLI86_10260;Dbxref=NCBI_GP:PDP43046.1;Name=PDP43046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224248.1;locus_tag=CLI86_10260;product=xanthan lyase;protein_id=PDP43046.1;transl_table=11 NSLJ01000029.1 Genbank gene 4608 6119 . + . ID=gene-CLI86_10265;Name=CLI86_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10265 NSLJ01000029.1 Protein Homology CDS 4608 6119 . + 0 ID=cds-PDP43072.1;Parent=gene-CLI86_10265;Dbxref=NCBI_GP:PDP43072.1;Name=PDP43072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224247.1;locus_tag=CLI86_10265;product=TolC family protein;protein_id=PDP43072.1;transl_table=11 NSLJ01000029.1 Genbank gene 6149 7216 . + . ID=gene-CLI86_10270;Name=CLI86_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10270 NSLJ01000029.1 Protein Homology CDS 6149 7216 . + 0 ID=cds-PDP43047.1;Parent=gene-CLI86_10270;Dbxref=NCBI_GP:PDP43047.1;Name=PDP43047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224246.1;locus_tag=CLI86_10270;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP43047.1;transl_table=11 NSLJ01000029.1 Genbank gene 7268 10354 . + . ID=gene-CLI86_10275;Name=CLI86_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10275 NSLJ01000029.1 Protein Homology CDS 7268 10354 . + 0 ID=cds-PDP43048.1;Parent=gene-CLI86_10275;Dbxref=NCBI_GP:PDP43048.1;Name=PDP43048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224245.1;locus_tag=CLI86_10275;product=AcrB/AcrD/AcrF family protein;protein_id=PDP43048.1;transl_table=11 NSLJ01000029.1 Genbank gene 10351 15036 . + . ID=gene-CLI86_10280;Name=CLI86_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10280 NSLJ01000029.1 Protein Homology CDS 10351 15036 . + 0 ID=cds-PDP43049.1;Parent=gene-CLI86_10280;Dbxref=NCBI_GP:PDP43049.1;Name=PDP43049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005649772.1;locus_tag=CLI86_10280;product=ABC transporter ATP-binding protein;protein_id=PDP43049.1;transl_table=11 NSLJ01000029.1 Genbank gene 15040 15750 . + . ID=gene-CLI86_10285;Name=CLI86_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10285 NSLJ01000029.1 Protein Homology CDS 15040 15750 . + 0 ID=cds-PDP43050.1;Parent=gene-CLI86_10285;Dbxref=NCBI_GP:PDP43050.1;Name=PDP43050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224243.1;locus_tag=CLI86_10285;product=hypothetical protein;protein_id=PDP43050.1;transl_table=11 NSLJ01000029.1 Genbank gene 15824 16078 . - . ID=gene-CLI86_10290;Name=CLI86_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10290 NSLJ01000029.1 Protein Homology CDS 15824 16078 . - 0 ID=cds-PDP43051.1;Parent=gene-CLI86_10290;Dbxref=NCBI_GP:PDP43051.1;Name=PDP43051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14903.4;locus_tag=CLI86_10290;product=hypothetical protein;protein_id=PDP43051.1;transl_table=11 NSLJ01000029.1 Genbank gene 16356 17117 . - . ID=gene-CLI86_10295;Name=CLI86_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10295 NSLJ01000029.1 Protein Homology CDS 16356 17117 . - 0 ID=cds-PDP43052.1;Parent=gene-CLI86_10295;Dbxref=NCBI_GP:PDP43052.1;Name=PDP43052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842730.1;locus_tag=CLI86_10295;product=DNA metabolism protein;protein_id=PDP43052.1;transl_table=11 NSLJ01000029.1 Genbank gene 17128 18396 . - . ID=gene-CLI86_10300;Name=CLI86_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10300 NSLJ01000029.1 Protein Homology CDS 17128 18396 . - 0 ID=cds-PDP43053.1;Parent=gene-CLI86_10300;Dbxref=NCBI_GP:PDP43053.1;Name=PDP43053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813393.1;locus_tag=CLI86_10300;product=putative DNA modification/repair radical SAM protein;protein_id=PDP43053.1;transl_table=11 NSLJ01000029.1 Genbank gene 18505 19530 . - . ID=gene-CLI86_10305;Name=CLI86_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10305 NSLJ01000029.1 Protein Homology CDS 18505 19530 . - 0 ID=cds-PDP43073.1;Parent=gene-CLI86_10305;Dbxref=NCBI_GP:PDP43073.1;Name=PDP43073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224238.1;locus_tag=CLI86_10305;product=peptide methionine sulfoxide reductase;protein_id=PDP43073.1;transl_table=11 NSLJ01000029.1 Genbank gene 19664 21025 . - . ID=gene-CLI86_10310;Name=CLI86_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10310 NSLJ01000029.1 Protein Homology CDS 19664 21025 . - 0 ID=cds-PDP43054.1;Parent=gene-CLI86_10310;Dbxref=NCBI_GP:PDP43054.1;Name=PDP43054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859947.1;locus_tag=CLI86_10310;product=TrpB-like pyridoxal phosphate-dependent enzyme;protein_id=PDP43054.1;transl_table=11 NSLJ01000029.1 Genbank pseudogene 21053 21270 . + . ID=gene-CLI86_10315;Name=CLI86_10315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_10315;pseudo=true NSLJ01000029.1 Protein Homology CDS 21053 21270 . + 0 ID=cds-CLI86_10315;Parent=gene-CLI86_10315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779056.1;locus_tag=CLI86_10315;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000029.1 Genbank gene 21491 23230 . - . ID=gene-CLI86_10320;Name=CLI86_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10320 NSLJ01000029.1 Protein Homology CDS 21491 23230 . - 0 ID=cds-PDP43055.1;Parent=gene-CLI86_10320;Dbxref=NCBI_GP:PDP43055.1;Name=PDP43055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00884.21;locus_tag=CLI86_10320;product=hypothetical protein;protein_id=PDP43055.1;transl_table=11 NSLJ01000029.1 Genbank gene 23237 24349 . - . ID=gene-CLI86_10325;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CLI86_10325 NSLJ01000029.1 Protein Homology CDS 23237 24349 . - 0 ID=cds-PDP43056.1;Parent=gene-CLI86_10325;Dbxref=NCBI_GP:PDP43056.1;Name=PDP43056.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224234.1;locus_tag=CLI86_10325;product=DNA-protecting protein DprA;protein_id=PDP43056.1;transl_table=11 NSLJ01000029.1 Genbank gene 24373 24765 . - . ID=gene-CLI86_10330;Name=CLI86_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10330 NSLJ01000029.1 Protein Homology CDS 24373 24765 . - 0 ID=cds-PDP43057.1;Parent=gene-CLI86_10330;Dbxref=NCBI_GP:PDP43057.1;Name=PDP43057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964436.1;locus_tag=CLI86_10330;product=thioesterase;protein_id=PDP43057.1;transl_table=11 NSLJ01000029.1 Genbank gene 25527 25808 . + . ID=gene-CLI86_10335;Name=CLI86_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10335 NSLJ01000029.1 GeneMarkS+ CDS 25527 25808 . + 0 ID=cds-PDP43058.1;Parent=gene-CLI86_10335;Dbxref=NCBI_GP:PDP43058.1;Name=PDP43058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10335;product=hypothetical protein;protein_id=PDP43058.1;transl_table=11 NSLJ01000029.1 Genbank gene 25891 26628 . + . ID=gene-CLI86_10340;Name=CLI86_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10340 NSLJ01000029.1 GeneMarkS+ CDS 25891 26628 . + 0 ID=cds-PDP43059.1;Parent=gene-CLI86_10340;Dbxref=NCBI_GP:PDP43059.1;Name=PDP43059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10340;product=hypothetical protein;protein_id=PDP43059.1;transl_table=11 NSLJ01000029.1 Genbank gene 26683 27399 . - . ID=gene-CLI86_10345;Name=CLI86_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10345 NSLJ01000029.1 GeneMarkS+ CDS 26683 27399 . - 0 ID=cds-PDP43060.1;Parent=gene-CLI86_10345;Dbxref=NCBI_GP:PDP43060.1;Name=PDP43060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10345;product=SAM-dependent methyltransferase;protein_id=PDP43060.1;transl_table=11 NSLJ01000029.1 Genbank gene 27396 28070 . - . ID=gene-CLI86_10350;Name=CLI86_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10350 NSLJ01000029.1 Protein Homology CDS 27396 28070 . - 0 ID=cds-PDP43061.1;Parent=gene-CLI86_10350;Dbxref=NCBI_GP:PDP43061.1;Name=PDP43061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224228.1;locus_tag=CLI86_10350;product=TIGR02453 family protein;protein_id=PDP43061.1;transl_table=11 NSLJ01000029.1 Genbank gene 28134 29543 . - . ID=gene-CLI86_10355;Name=CLI86_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10355 NSLJ01000029.1 GeneMarkS+ CDS 28134 29543 . - 0 ID=cds-PDP43062.1;Parent=gene-CLI86_10355;Dbxref=NCBI_GP:PDP43062.1;Name=PDP43062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10355;product=hypothetical protein;protein_id=PDP43062.1;transl_table=11 NSLJ01000029.1 Genbank gene 29553 32495 . - . ID=gene-CLI86_10360;Name=CLI86_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10360 NSLJ01000029.1 Protein Homology CDS 29553 32495 . - 0 ID=cds-PDP43063.1;Parent=gene-CLI86_10360;Dbxref=NCBI_GP:PDP43063.1;Name=PDP43063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224226.1;locus_tag=CLI86_10360;product=hypothetical protein;protein_id=PDP43063.1;transl_table=11 NSLJ01000029.1 Genbank gene 32510 33442 . - . ID=gene-CLI86_10365;Name=CLI86_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10365 NSLJ01000029.1 Protein Homology CDS 32510 33442 . - 0 ID=cds-PDP43064.1;Parent=gene-CLI86_10365;Dbxref=NCBI_GP:PDP43064.1;Name=PDP43064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224225.1;locus_tag=CLI86_10365;product=quinolinate synthase NadA;protein_id=PDP43064.1;transl_table=11 NSLJ01000029.1 Genbank gene 33785 34915 . + . ID=gene-CLI86_10370;Name=CLI86_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10370 NSLJ01000029.1 Protein Homology CDS 33785 34915 . + 0 ID=cds-PDP43065.1;Parent=gene-CLI86_10370;Dbxref=NCBI_GP:PDP43065.1;Name=PDP43065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842269.1;locus_tag=CLI86_10370;product=galactose-1-epimerase;protein_id=PDP43065.1;transl_table=11 NSLJ01000029.1 Genbank gene 35233 36591 . - . ID=gene-CLI86_10375;Name=CLI86_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10375 NSLJ01000029.1 Protein Homology CDS 35233 36591 . - 0 ID=cds-PDP43066.1;Parent=gene-CLI86_10375;Dbxref=NCBI_GP:PDP43066.1;Name=PDP43066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224222.1;locus_tag=CLI86_10375;product=sodium-dependent transporter;protein_id=PDP43066.1;transl_table=11 NSLJ01000029.1 Genbank gene 36588 37235 . - . ID=gene-CLI86_10380;Name=CLI86_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10380 NSLJ01000029.1 Protein Homology CDS 36588 37235 . - 0 ID=cds-PDP43067.1;Parent=gene-CLI86_10380;Dbxref=NCBI_GP:PDP43067.1;Name=PDP43067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224221.1;locus_tag=CLI86_10380;product=ABC transporter ATP-binding protein;protein_id=PDP43067.1;transl_table=11 NSLJ01000029.1 Genbank gene 37435 37986 . + . ID=gene-CLI86_10385;Name=CLI86_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10385 NSLJ01000029.1 Protein Homology CDS 37435 37986 . + 0 ID=cds-PDP43074.1;Parent=gene-CLI86_10385;Dbxref=NCBI_GP:PDP43074.1;Name=PDP43074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538798.1;locus_tag=CLI86_10385;product=DUF2179 domain-containing protein;protein_id=PDP43074.1;transl_table=11 NSLJ01000029.1 Genbank gene 37990 39276 . - . ID=gene-CLI86_10390;Name=CLI86_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10390 NSLJ01000029.1 Protein Homology CDS 37990 39276 . - 0 ID=cds-PDP43068.1;Parent=gene-CLI86_10390;Dbxref=NCBI_GP:PDP43068.1;Name=PDP43068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224218.1;locus_tag=CLI86_10390;product=histidine-type phosphatase;protein_id=PDP43068.1;transl_table=11 NSLJ01000029.1 Genbank gene 39325 40470 . - . ID=gene-CLI86_10395;Name=CLI86_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10395 NSLJ01000029.1 Protein Homology CDS 39325 40470 . - 0 ID=cds-PDP43075.1;Parent=gene-CLI86_10395;Dbxref=NCBI_GP:PDP43075.1;Name=PDP43075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354290.1;locus_tag=CLI86_10395;product=ATPase;protein_id=PDP43075.1;transl_table=11 NSLJ01000029.1 Genbank gene 40487 41266 . - . ID=gene-CLI86_10400;Name=CLI86_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10400 NSLJ01000029.1 Protein Homology CDS 40487 41266 . - 0 ID=cds-PDP43069.1;Parent=gene-CLI86_10400;Dbxref=NCBI_GP:PDP43069.1;Name=PDP43069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224216.1;locus_tag=CLI86_10400;product=phosphatase PAP2 family protein;protein_id=PDP43069.1;transl_table=11 NSLJ01000029.1 Genbank gene 41565 42557 . + . ID=gene-CLI86_10405;Name=CLI86_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10405 NSLJ01000029.1 GeneMarkS+ CDS 41565 42557 . + 0 ID=cds-PDP43070.1;Parent=gene-CLI86_10405;Dbxref=NCBI_GP:PDP43070.1;Name=PDP43070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10405;product=hypothetical protein;protein_id=PDP43070.1;transl_table=11 NSLJ01000029.1 Genbank gene 42654 43562 . - . ID=gene-CLI86_10410;Name=CLI86_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10410 NSLJ01000029.1 Protein Homology CDS 42654 43562 . - 0 ID=cds-PDP43071.1;Parent=gene-CLI86_10410;Dbxref=NCBI_GP:PDP43071.1;Name=PDP43071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224213.1;locus_tag=CLI86_10410;product=GntR family transcriptional regulator;protein_id=PDP43071.1;transl_table=11 ##sequence-region NSLJ01000002.1 1 173515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000002.1 Genbank region 1 173515 . + . ID=NSLJ01000002.1:1..173515;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000002.1 Genbank gene 181 975 . - . ID=gene-CLI86_00805;Name=CLI86_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00805 NSLJ01000002.1 Protein Homology CDS 181 975 . - 0 ID=cds-PDP45027.1;Parent=gene-CLI86_00805;Dbxref=NCBI_GP:PDP45027.1;Name=PDP45027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637001.1;locus_tag=CLI86_00805;product=peptidase M48 family protein;protein_id=PDP45027.1;transl_table=11 NSLJ01000002.1 Genbank gene 1009 2460 . - . ID=gene-CLI86_00810;Name=CLI86_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00810 NSLJ01000002.1 Protein Homology CDS 1009 2460 . - 0 ID=cds-PDP44922.1;Parent=gene-CLI86_00810;Dbxref=NCBI_GP:PDP44922.1;Name=PDP44922.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223898.1;locus_tag=CLI86_00810;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=PDP44922.1;transl_table=11 NSLJ01000002.1 Genbank gene 2592 3923 . - . ID=gene-CLI86_00815;Name=CLI86_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00815 NSLJ01000002.1 Protein Homology CDS 2592 3923 . - 0 ID=cds-PDP44923.1;Parent=gene-CLI86_00815;Dbxref=NCBI_GP:PDP44923.1;Name=PDP44923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223899.1;locus_tag=CLI86_00815;product=MATE family efflux transporter;protein_id=PDP44923.1;transl_table=11 NSLJ01000002.1 Genbank gene 3931 5109 . - . ID=gene-CLI86_00820;Name=CLI86_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00820 NSLJ01000002.1 Protein Homology CDS 3931 5109 . - 0 ID=cds-PDP44924.1;Parent=gene-CLI86_00820;Dbxref=NCBI_GP:PDP44924.1;Name=PDP44924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223900.1;locus_tag=CLI86_00820;product=DUF3410 domain-containing protein;protein_id=PDP44924.1;transl_table=11 NSLJ01000002.1 Genbank gene 5214 5663 . - . ID=gene-CLI86_00825;Name=CLI86_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00825 NSLJ01000002.1 Protein Homology CDS 5214 5663 . - 0 ID=cds-PDP45028.1;Parent=gene-CLI86_00825;Dbxref=NCBI_GP:PDP45028.1;Name=PDP45028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008157642.1;locus_tag=CLI86_00825;product=YhcH/YjgK/YiaL family protein;protein_id=PDP45028.1;transl_table=11 NSLJ01000002.1 Genbank gene 5681 5908 . + . ID=gene-CLI86_00830;Name=CLI86_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00830 NSLJ01000002.1 GeneMarkS+ CDS 5681 5908 . + 0 ID=cds-PDP44925.1;Parent=gene-CLI86_00830;Dbxref=NCBI_GP:PDP44925.1;Name=PDP44925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00830;product=hypothetical protein;protein_id=PDP44925.1;transl_table=11 NSLJ01000002.1 Genbank gene 5895 7214 . - . ID=gene-CLI86_00835;Name=CLI86_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00835 NSLJ01000002.1 Protein Homology CDS 5895 7214 . - 0 ID=cds-PDP44926.1;Parent=gene-CLI86_00835;Dbxref=NCBI_GP:PDP44926.1;Name=PDP44926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223903.1;locus_tag=CLI86_00835;product=modulator protein;protein_id=PDP44926.1;transl_table=11 NSLJ01000002.1 Genbank gene 7216 8754 . - . ID=gene-CLI86_00840;Name=CLI86_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00840 NSLJ01000002.1 Protein Homology CDS 7216 8754 . - 0 ID=cds-PDP44927.1;Parent=gene-CLI86_00840;Dbxref=NCBI_GP:PDP44927.1;Name=PDP44927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149602.1;locus_tag=CLI86_00840;product=peptidase U62;protein_id=PDP44927.1;transl_table=11 NSLJ01000002.1 Genbank gene 8953 9510 . + . ID=gene-CLI86_00845;Name=CLI86_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00845 NSLJ01000002.1 Protein Homology CDS 8953 9510 . + 0 ID=cds-PDP45029.1;Parent=gene-CLI86_00845;Dbxref=NCBI_GP:PDP45029.1;Name=PDP45029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641250.1;locus_tag=CLI86_00845;product=DUF3332 domain-containing protein;protein_id=PDP45029.1;transl_table=11 NSLJ01000002.1 Genbank gene 9535 12924 . + . ID=gene-CLI86_00850;Name=CLI86_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00850 NSLJ01000002.1 Protein Homology CDS 9535 12924 . + 0 ID=cds-PDP44928.1;Parent=gene-CLI86_00850;Dbxref=NCBI_GP:PDP44928.1;Name=PDP44928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223906.1;locus_tag=CLI86_00850;product=beta-galactosidase;protein_id=PDP44928.1;transl_table=11 NSLJ01000002.1 Genbank gene 13040 14395 . - . ID=gene-CLI86_00855;Name=CLI86_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00855 NSLJ01000002.1 Protein Homology CDS 13040 14395 . - 0 ID=cds-PDP44929.1;Parent=gene-CLI86_00855;Dbxref=NCBI_GP:PDP44929.1;Name=PDP44929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223907.1;locus_tag=CLI86_00855;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=PDP44929.1;transl_table=11 NSLJ01000002.1 Genbank gene 14451 15287 . - . ID=gene-CLI86_00860;Name=CLI86_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00860 NSLJ01000002.1 Protein Homology CDS 14451 15287 . - 0 ID=cds-PDP44930.1;Parent=gene-CLI86_00860;Dbxref=NCBI_GP:PDP44930.1;Name=PDP44930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843947.1;locus_tag=CLI86_00860;product=endonuclease;protein_id=PDP44930.1;transl_table=11 NSLJ01000002.1 Genbank gene 15318 16070 . - . ID=gene-CLI86_00865;Name=CLI86_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00865 NSLJ01000002.1 Protein Homology CDS 15318 16070 . - 0 ID=cds-PDP44931.1;Parent=gene-CLI86_00865;Dbxref=NCBI_GP:PDP44931.1;Name=PDP44931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223910.1;locus_tag=CLI86_00865;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=PDP44931.1;transl_table=11 NSLJ01000002.1 Genbank gene 16184 16732 . - . ID=gene-CLI86_00870;Name=CLI86_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00870 NSLJ01000002.1 GeneMarkS+ CDS 16184 16732 . - 0 ID=cds-PDP44932.1;Parent=gene-CLI86_00870;Dbxref=NCBI_GP:PDP44932.1;Name=PDP44932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00870;product=hypothetical protein;protein_id=PDP44932.1;transl_table=11 NSLJ01000002.1 Genbank pseudogene 16925 17134 . - . ID=gene-CLI86_00875;Name=CLI86_00875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_00875;pseudo=true NSLJ01000002.1 Protein Homology CDS 16925 17134 . - 0 ID=cds-CLI86_00875;Parent=gene-CLI86_00875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225172.1;locus_tag=CLI86_00875;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000002.1 Genbank gene 17185 17877 . - . ID=gene-CLI86_00880;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=CLI86_00880 NSLJ01000002.1 Protein Homology CDS 17185 17877 . - 0 ID=cds-PDP44933.1;Parent=gene-CLI86_00880;Dbxref=NCBI_GP:PDP44933.1;Name=PDP44933.1;gbkey=CDS;gene=pgl;inference=COORDINATES: protein motif:HMM:TIGR01198;locus_tag=CLI86_00880;product=6-phosphogluconolactonase;protein_id=PDP44933.1;transl_table=11 NSLJ01000002.1 Genbank gene 17877 19412 . - . ID=gene-CLI86_00885;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CLI86_00885 NSLJ01000002.1 Protein Homology CDS 17877 19412 . - 0 ID=cds-PDP44934.1;Parent=gene-CLI86_00885;Dbxref=NCBI_GP:PDP44934.1;Name=PDP44934.1;gbkey=CDS;gene=zwf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223914.1;locus_tag=CLI86_00885;product=glucose-6-phosphate dehydrogenase;protein_id=PDP44934.1;transl_table=11 NSLJ01000002.1 Genbank gene 19566 20924 . - . ID=gene-CLI86_00890;Name=CLI86_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00890 NSLJ01000002.1 Protein Homology CDS 19566 20924 . - 0 ID=cds-PDP44935.1;Parent=gene-CLI86_00890;Dbxref=NCBI_GP:PDP44935.1;Name=PDP44935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223916.1;locus_tag=CLI86_00890;product=transporter;protein_id=PDP44935.1;transl_table=11 NSLJ01000002.1 Genbank gene 20944 22062 . - . ID=gene-CLI86_00895;Name=CLI86_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00895 NSLJ01000002.1 Protein Homology CDS 20944 22062 . - 0 ID=cds-PDP44936.1;Parent=gene-CLI86_00895;Dbxref=NCBI_GP:PDP44936.1;Name=PDP44936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223917.1;locus_tag=CLI86_00895;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP44936.1;transl_table=11 NSLJ01000002.1 Genbank gene 22084 23340 . - . ID=gene-CLI86_00900;Name=CLI86_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00900 NSLJ01000002.1 Protein Homology CDS 22084 23340 . - 0 ID=cds-PDP45030.1;Parent=gene-CLI86_00900;Dbxref=NCBI_GP:PDP45030.1;Name=PDP45030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859309.1;locus_tag=CLI86_00900;product=ABC transporter ATP-binding protein;protein_id=PDP45030.1;transl_table=11 NSLJ01000002.1 Genbank gene 23355 24632 . - . ID=gene-CLI86_00905;Name=CLI86_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00905 NSLJ01000002.1 Protein Homology CDS 23355 24632 . - 0 ID=cds-PDP44937.1;Parent=gene-CLI86_00905;Dbxref=NCBI_GP:PDP44937.1;Name=PDP44937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859307.1;locus_tag=CLI86_00905;product=multidrug ABC transporter substrate-binding protein;protein_id=PDP44937.1;transl_table=11 NSLJ01000002.1 Genbank gene 24626 25294 . - . ID=gene-CLI86_00910;Name=CLI86_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00910 NSLJ01000002.1 Protein Homology CDS 24626 25294 . - 0 ID=cds-PDP45031.1;Parent=gene-CLI86_00910;Dbxref=NCBI_GP:PDP45031.1;Name=PDP45031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223920.1;locus_tag=CLI86_00910;product=ABC transporter ATP-binding protein;protein_id=PDP45031.1;transl_table=11 NSLJ01000002.1 Genbank gene 25704 27653 . - . ID=gene-CLI86_00915;Name=CLI86_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00915 NSLJ01000002.1 Protein Homology CDS 25704 27653 . - 0 ID=cds-PDP44938.1;Parent=gene-CLI86_00915;Dbxref=NCBI_GP:PDP44938.1;Name=PDP44938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223922.1;locus_tag=CLI86_00915;product=alpha-amylase;protein_id=PDP44938.1;transl_table=11 NSLJ01000002.1 Genbank gene 27804 28295 . - . ID=gene-CLI86_00920;Name=CLI86_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00920 NSLJ01000002.1 Protein Homology CDS 27804 28295 . - 0 ID=cds-PDP45032.1;Parent=gene-CLI86_00920;Dbxref=NCBI_GP:PDP45032.1;Name=PDP45032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647619.1;locus_tag=CLI86_00920;product=hypothetical protein;protein_id=PDP45032.1;transl_table=11 NSLJ01000002.1 Genbank gene 29461 31776 . - . ID=gene-CLI86_00925;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CLI86_00925 NSLJ01000002.1 Protein Homology CDS 29461 31776 . - 0 ID=cds-PDP44939.1;Parent=gene-CLI86_00925;Dbxref=NCBI_GP:PDP44939.1;Name=PDP44939.1;gbkey=CDS;gene=pbpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223924.1;locus_tag=CLI86_00925;product=penicillin-binding protein 1C;protein_id=PDP44939.1;transl_table=11 NSLJ01000002.1 Genbank gene 31773 37286 . - . ID=gene-CLI86_00930;Name=CLI86_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00930 NSLJ01000002.1 Protein Homology CDS 31773 37286 . - 0 ID=cds-PDP45033.1;Parent=gene-CLI86_00930;Dbxref=NCBI_GP:PDP45033.1;Name=PDP45033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223925.1;locus_tag=CLI86_00930;product=alpha-2-macroglobulin;protein_id=PDP45033.1;transl_table=11 NSLJ01000002.1 Genbank gene 37712 38350 . + . ID=gene-CLI86_00935;Name=CLI86_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00935 NSLJ01000002.1 Protein Homology CDS 37712 38350 . + 0 ID=cds-PDP44940.1;Parent=gene-CLI86_00935;Dbxref=NCBI_GP:PDP44940.1;Name=PDP44940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152633.1;locus_tag=CLI86_00935;product=orotate phosphoribosyltransferase;protein_id=PDP44940.1;transl_table=11 NSLJ01000002.1 Genbank gene 38369 38803 . + . ID=gene-CLI86_00940;Name=CLI86_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00940 NSLJ01000002.1 Protein Homology CDS 38369 38803 . + 0 ID=cds-PDP44941.1;Parent=gene-CLI86_00940;Dbxref=NCBI_GP:PDP44941.1;Name=PDP44941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538383.1;locus_tag=CLI86_00940;product=polyketide cyclase;protein_id=PDP44941.1;transl_table=11 NSLJ01000002.1 Genbank gene 38809 40146 . + . ID=gene-CLI86_00945;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CLI86_00945 NSLJ01000002.1 Protein Homology CDS 38809 40146 . + 0 ID=cds-PDP44942.1;Parent=gene-CLI86_00945;Dbxref=NCBI_GP:PDP44942.1;Name=PDP44942.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637352.1;locus_tag=CLI86_00945;product=argininosuccinate lyase;protein_id=PDP44942.1;transl_table=11 NSLJ01000002.1 Genbank gene 40143 40610 . + . ID=gene-CLI86_00950;Name=CLI86_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00950 NSLJ01000002.1 GeneMarkS+ CDS 40143 40610 . + 0 ID=cds-PDP44943.1;Parent=gene-CLI86_00950;Dbxref=NCBI_GP:PDP44943.1;Name=PDP44943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_00950;product=hypothetical protein;protein_id=PDP44943.1;transl_table=11 NSLJ01000002.1 Genbank gene 40757 41914 . + . ID=gene-CLI86_00955;Name=CLI86_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00955 NSLJ01000002.1 Protein Homology CDS 40757 41914 . + 0 ID=cds-PDP44944.1;Parent=gene-CLI86_00955;Dbxref=NCBI_GP:PDP44944.1;Name=PDP44944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223931.1;locus_tag=CLI86_00955;product=mannosyltransferase;protein_id=PDP44944.1;transl_table=11 NSLJ01000002.1 Genbank gene 41918 42553 . - . ID=gene-CLI86_00960;Name=CLI86_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00960 NSLJ01000002.1 Protein Homology CDS 41918 42553 . - 0 ID=cds-PDP44945.1;Parent=gene-CLI86_00960;Dbxref=NCBI_GP:PDP44945.1;Name=PDP44945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007479300.1;locus_tag=CLI86_00960;product=ribonuclease H;protein_id=PDP44945.1;transl_table=11 NSLJ01000002.1 Genbank gene 42728 43909 . + . ID=gene-CLI86_00965;Name=CLI86_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00965 NSLJ01000002.1 Protein Homology CDS 42728 43909 . + 0 ID=cds-PDP44946.1;Parent=gene-CLI86_00965;Dbxref=NCBI_GP:PDP44946.1;Name=PDP44946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08534.8;locus_tag=CLI86_00965;product=hypothetical protein;protein_id=PDP44946.1;transl_table=11 NSLJ01000002.1 Genbank gene 43937 44446 . + . ID=gene-CLI86_00970;Name=CLI86_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00970 NSLJ01000002.1 Protein Homology CDS 43937 44446 . + 0 ID=cds-PDP44947.1;Parent=gene-CLI86_00970;Dbxref=NCBI_GP:PDP44947.1;Name=PDP44947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223935.1;locus_tag=CLI86_00970;product=adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase;protein_id=PDP44947.1;transl_table=11 NSLJ01000002.1 Genbank gene 44472 44545 . - . ID=gene-CLI86_00975;Name=CLI86_00975;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_00975 NSLJ01000002.1 tRNAscan-SE tRNA 44472 44545 . - . ID=rna-CLI86_00975;Parent=gene-CLI86_00975;anticodon=(pos:complement(44511..44513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00975;product=tRNA-Gln NSLJ01000002.1 tRNAscan-SE exon 44472 44545 . - . ID=exon-CLI86_00975-1;Parent=rna-CLI86_00975;anticodon=(pos:complement(44511..44513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_00975;product=tRNA-Gln NSLJ01000002.1 Genbank gene 44618 45910 . - . ID=gene-CLI86_00980;Name=CLI86_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00980 NSLJ01000002.1 Protein Homology CDS 44618 45910 . - 0 ID=cds-PDP44948.1;Parent=gene-CLI86_00980;Dbxref=NCBI_GP:PDP44948.1;Name=PDP44948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008778966.1;locus_tag=CLI86_00980;product=tyrosine--tRNA ligase;protein_id=PDP44948.1;transl_table=11 NSLJ01000002.1 Genbank gene 46047 47360 . - . ID=gene-CLI86_00985;Name=CLI86_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00985 NSLJ01000002.1 Protein Homology CDS 46047 47360 . - 0 ID=cds-PDP44949.1;Parent=gene-CLI86_00985;Dbxref=NCBI_GP:PDP44949.1;Name=PDP44949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773802.1;locus_tag=CLI86_00985;product=ribosome biogenesis GTPase Der;protein_id=PDP44949.1;transl_table=11 NSLJ01000002.1 Genbank gene 47438 48331 . - . ID=gene-CLI86_00990;Name=CLI86_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00990 NSLJ01000002.1 Protein Homology CDS 47438 48331 . - 0 ID=cds-PDP44950.1;Parent=gene-CLI86_00990;Dbxref=NCBI_GP:PDP44950.1;Name=PDP44950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853837.1;locus_tag=CLI86_00990;product=GTPase Era;protein_id=PDP44950.1;transl_table=11 NSLJ01000002.1 Genbank gene 48312 49316 . - . ID=gene-CLI86_00995;Name=CLI86_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_00995 NSLJ01000002.1 Protein Homology CDS 48312 49316 . - 0 ID=cds-PDP44951.1;Parent=gene-CLI86_00995;Dbxref=NCBI_GP:PDP44951.1;Name=PDP44951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859680.1;locus_tag=CLI86_00995;product=ketoacyl-ACP synthase III;protein_id=PDP44951.1;transl_table=11 NSLJ01000002.1 Genbank gene 49404 49589 . - . ID=gene-CLI86_01000;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CLI86_01000 NSLJ01000002.1 Protein Homology CDS 49404 49589 . - 0 ID=cds-PDP44952.1;Parent=gene-CLI86_01000;Dbxref=NCBI_GP:PDP44952.1;Name=PDP44952.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562387.1;locus_tag=CLI86_01000;product=50S ribosomal protein L32;protein_id=PDP44952.1;transl_table=11 NSLJ01000002.1 Genbank gene 49611 50195 . - . ID=gene-CLI86_01005;Name=CLI86_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01005 NSLJ01000002.1 Protein Homology CDS 49611 50195 . - 0 ID=cds-PDP44953.1;Parent=gene-CLI86_01005;Dbxref=NCBI_GP:PDP44953.1;Name=PDP44953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223942.1;locus_tag=CLI86_01005;product=hypothetical protein;protein_id=PDP44953.1;transl_table=11 NSLJ01000002.1 Genbank gene 50346 52727 . - . ID=gene-CLI86_01010;Name=CLI86_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01010 NSLJ01000002.1 Protein Homology CDS 50346 52727 . - 0 ID=cds-PDP44954.1;Parent=gene-CLI86_01010;Dbxref=NCBI_GP:PDP44954.1;Name=PDP44954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223944.1;locus_tag=CLI86_01010;product=sugar hydrolase;protein_id=PDP44954.1;transl_table=11 NSLJ01000002.1 Genbank gene 52714 54195 . - . ID=gene-CLI86_01015;Name=CLI86_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01015 NSLJ01000002.1 Protein Homology CDS 52714 54195 . - 0 ID=cds-PDP44955.1;Parent=gene-CLI86_01015;Dbxref=NCBI_GP:PDP44955.1;Name=PDP44955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223945.1;locus_tag=CLI86_01015;product=glycoside hydrolase;protein_id=PDP44955.1;transl_table=11 NSLJ01000002.1 Genbank gene 54216 57092 . - . ID=gene-CLI86_01020;Name=CLI86_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01020 NSLJ01000002.1 Protein Homology CDS 54216 57092 . - 0 ID=cds-PDP45034.1;Parent=gene-CLI86_01020;Dbxref=NCBI_GP:PDP45034.1;Name=PDP45034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005651438.1;locus_tag=CLI86_01020;product=glycoside hydrolase family 2;protein_id=PDP45034.1;transl_table=11 NSLJ01000002.1 Genbank gene 57129 60497 . - . ID=gene-CLI86_01025;Name=CLI86_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01025 NSLJ01000002.1 Protein Homology CDS 57129 60497 . - 0 ID=cds-PDP45035.1;Parent=gene-CLI86_01025;Dbxref=NCBI_GP:PDP45035.1;Name=PDP45035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223947.1;locus_tag=CLI86_01025;product=glycosyl hydrolase family 2;protein_id=PDP45035.1;transl_table=11 NSLJ01000002.1 Genbank gene 60691 62304 . - . ID=gene-CLI86_01030;Name=CLI86_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01030 NSLJ01000002.1 Protein Homology CDS 60691 62304 . - 0 ID=cds-PDP44956.1;Parent=gene-CLI86_01030;Dbxref=NCBI_GP:PDP44956.1;Name=PDP44956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223948.1;locus_tag=CLI86_01030;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44956.1;transl_table=11 NSLJ01000002.1 Genbank gene 62325 65744 . - . ID=gene-CLI86_01035;Name=CLI86_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01035 NSLJ01000002.1 Protein Homology CDS 62325 65744 . - 0 ID=cds-PDP45036.1;Parent=gene-CLI86_01035;Dbxref=NCBI_GP:PDP45036.1;Name=PDP45036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009133480.1;locus_tag=CLI86_01035;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP45036.1;transl_table=11 NSLJ01000002.1 Genbank gene 66264 67295 . - . ID=gene-CLI86_01040;Name=CLI86_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01040 NSLJ01000002.1 Protein Homology CDS 66264 67295 . - 0 ID=cds-PDP44957.1;Parent=gene-CLI86_01040;Dbxref=NCBI_GP:PDP44957.1;Name=PDP44957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223950.1;locus_tag=CLI86_01040;product=iron dicitrate transport regulator FecR;protein_id=PDP44957.1;transl_table=11 NSLJ01000002.1 Genbank gene 67457 69454 . - . ID=gene-CLI86_01045;Name=CLI86_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01045 NSLJ01000002.1 Protein Homology CDS 67457 69454 . - 0 ID=cds-PDP44958.1;Parent=gene-CLI86_01045;Dbxref=NCBI_GP:PDP44958.1;Name=PDP44958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223951.1;locus_tag=CLI86_01045;product=S9 family peptidase;protein_id=PDP44958.1;transl_table=11 NSLJ01000002.1 Genbank gene 69470 70960 . - . ID=gene-CLI86_01050;Name=CLI86_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01050 NSLJ01000002.1 Protein Homology CDS 69470 70960 . - 0 ID=cds-PDP44959.1;Parent=gene-CLI86_01050;Dbxref=NCBI_GP:PDP44959.1;Name=PDP44959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9;locus_tag=CLI86_01050;product=hypothetical protein;protein_id=PDP44959.1;transl_table=11 NSLJ01000002.1 Genbank gene 70988 74299 . - . ID=gene-CLI86_01055;Name=CLI86_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01055 NSLJ01000002.1 Protein Homology CDS 70988 74299 . - 0 ID=cds-PDP44960.1;Parent=gene-CLI86_01055;Dbxref=NCBI_GP:PDP44960.1;Name=PDP44960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223953.1;locus_tag=CLI86_01055;product=membrane receptor RagA;protein_id=PDP44960.1;transl_table=11 NSLJ01000002.1 Genbank gene 74794 76263 . + . ID=gene-CLI86_01060;Name=CLI86_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01060 NSLJ01000002.1 Protein Homology CDS 74794 76263 . + 0 ID=cds-PDP44961.1;Parent=gene-CLI86_01060;Dbxref=NCBI_GP:PDP44961.1;Name=PDP44961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01640.15;locus_tag=CLI86_01060;product=hypothetical protein;protein_id=PDP44961.1;transl_table=11 NSLJ01000002.1 Genbank gene 76324 77406 . + . ID=gene-CLI86_01065;Name=CLI86_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01065 NSLJ01000002.1 GeneMarkS+ CDS 76324 77406 . + 0 ID=cds-PDP44962.1;Parent=gene-CLI86_01065;Dbxref=NCBI_GP:PDP44962.1;Name=PDP44962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01065;product=hypothetical protein;protein_id=PDP44962.1;transl_table=11 NSLJ01000002.1 Genbank pseudogene 77904 78177 . - . ID=gene-CLI86_01070;Name=CLI86_01070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01070;pseudo=true NSLJ01000002.1 Protein Homology CDS 77904 78177 . - 0 ID=cds-CLI86_01070;Parent=gene-CLI86_01070;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007567149.1;locus_tag=CLI86_01070;product=IS1380 family transposase;pseudo=true;transl_table=11 NSLJ01000002.1 Genbank gene 78425 79036 . + . ID=gene-CLI86_01075;Name=CLI86_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01075 NSLJ01000002.1 Protein Homology CDS 78425 79036 . + 0 ID=cds-PDP44963.1;Parent=gene-CLI86_01075;Dbxref=NCBI_GP:PDP44963.1;Name=PDP44963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223958.1;locus_tag=CLI86_01075;product=alkyl hydroperoxide reductase;protein_id=PDP44963.1;transl_table=11 NSLJ01000002.1 Genbank gene 79056 79334 . + . ID=gene-CLI86_01080;Name=CLI86_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01080 NSLJ01000002.1 GeneMarkS+ CDS 79056 79334 . + 0 ID=cds-PDP44964.1;Parent=gene-CLI86_01080;Dbxref=NCBI_GP:PDP44964.1;Name=PDP44964.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01080;product=hypothetical protein;protein_id=PDP44964.1;transl_table=11 NSLJ01000002.1 Genbank gene 79540 80196 . + . ID=gene-CLI86_01085;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CLI86_01085 NSLJ01000002.1 Protein Homology CDS 79540 80196 . + 0 ID=cds-PDP44965.1;Parent=gene-CLI86_01085;Dbxref=NCBI_GP:PDP44965.1;Name=PDP44965.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801586.1;locus_tag=CLI86_01085;product=fructose-6-phosphate aldolase;protein_id=PDP44965.1;transl_table=11 NSLJ01000002.1 Genbank gene 80304 80909 . + . ID=gene-CLI86_01090;Name=CLI86_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01090 NSLJ01000002.1 Protein Homology CDS 80304 80909 . + 0 ID=cds-PDP44966.1;Parent=gene-CLI86_01090;Dbxref=NCBI_GP:PDP44966.1;Name=PDP44966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964287.1;locus_tag=CLI86_01090;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=PDP44966.1;transl_table=11 NSLJ01000002.1 Genbank gene 80922 81632 . + . ID=gene-CLI86_01095;Name=CLI86_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01095 NSLJ01000002.1 GeneMarkS+ CDS 80922 81632 . + 0 ID=cds-PDP44967.1;Parent=gene-CLI86_01095;Dbxref=NCBI_GP:PDP44967.1;Name=PDP44967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01095;product=hypothetical protein;protein_id=PDP44967.1;transl_table=11 NSLJ01000002.1 Genbank gene 81664 82332 . + . ID=gene-CLI86_01100;Name=CLI86_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01100 NSLJ01000002.1 GeneMarkS+ CDS 81664 82332 . + 0 ID=cds-PDP44968.1;Parent=gene-CLI86_01100;Dbxref=NCBI_GP:PDP44968.1;Name=PDP44968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01100;product=hypothetical protein;protein_id=PDP44968.1;transl_table=11 NSLJ01000002.1 Genbank gene 82349 83341 . + . ID=gene-CLI86_01105;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CLI86_01105 NSLJ01000002.1 Protein Homology CDS 82349 83341 . + 0 ID=cds-PDP45037.1;Parent=gene-CLI86_01105;Dbxref=NCBI_GP:PDP45037.1;Name=PDP45037.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223965.1;locus_tag=CLI86_01105;product=tryptophan--tRNA ligase;protein_id=PDP45037.1;transl_table=11 NSLJ01000002.1 Genbank gene 83457 83846 . + . ID=gene-CLI86_01110;Name=CLI86_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01110 NSLJ01000002.1 Protein Homology CDS 83457 83846 . + 0 ID=cds-PDP45038.1;Parent=gene-CLI86_01110;Dbxref=NCBI_GP:PDP45038.1;Name=PDP45038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101659.1;locus_tag=CLI86_01110;product=antibiotic biosynthesis monooxygenase;protein_id=PDP45038.1;transl_table=11 NSLJ01000002.1 Genbank gene 84007 84372 . + . ID=gene-CLI86_01115;Name=CLI86_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01115 NSLJ01000002.1 GeneMarkS+ CDS 84007 84372 . + 0 ID=cds-PDP44969.1;Parent=gene-CLI86_01115;Dbxref=NCBI_GP:PDP44969.1;Name=PDP44969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01115;product=hypothetical protein;protein_id=PDP44969.1;transl_table=11 NSLJ01000002.1 Genbank gene 84676 85674 . - . ID=gene-CLI86_01120;Name=CLI86_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01120 NSLJ01000002.1 Protein Homology CDS 84676 85674 . - 0 ID=cds-PDP44970.1;Parent=gene-CLI86_01120;Dbxref=NCBI_GP:PDP44970.1;Name=PDP44970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009237550.1;locus_tag=CLI86_01120;product=malate dehydrogenase;protein_id=PDP44970.1;transl_table=11 NSLJ01000002.1 Genbank gene 86001 87929 . + . ID=gene-CLI86_01125;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CLI86_01125 NSLJ01000002.1 Protein Homology CDS 86001 87929 . + 0 ID=cds-PDP44971.1;Parent=gene-CLI86_01125;Dbxref=NCBI_GP:PDP44971.1;Name=PDP44971.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223970.1;locus_tag=CLI86_01125;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=PDP44971.1;transl_table=11 NSLJ01000002.1 Genbank gene 87926 89266 . + . ID=gene-CLI86_01130;Name=CLI86_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01130 NSLJ01000002.1 Protein Homology CDS 87926 89266 . + 0 ID=cds-PDP44972.1;Parent=gene-CLI86_01130;Dbxref=NCBI_GP:PDP44972.1;Name=PDP44972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223971.1;locus_tag=CLI86_01130;product=Trk system potassium transporter TrkA;protein_id=PDP44972.1;transl_table=11 NSLJ01000002.1 Genbank gene 89273 90730 . + . ID=gene-CLI86_01135;Name=CLI86_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01135 NSLJ01000002.1 Protein Homology CDS 89273 90730 . + 0 ID=cds-PDP44973.1;Parent=gene-CLI86_01135;Dbxref=NCBI_GP:PDP44973.1;Name=PDP44973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223972.1;locus_tag=CLI86_01135;product=potassium transporter;protein_id=PDP44973.1;transl_table=11 NSLJ01000002.1 Genbank gene 90874 91362 . - . ID=gene-CLI86_01140;Name=CLI86_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01140 NSLJ01000002.1 Protein Homology CDS 90874 91362 . - 0 ID=cds-PDP44974.1;Parent=gene-CLI86_01140;Dbxref=NCBI_GP:PDP44974.1;Name=PDP44974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810332.1;locus_tag=CLI86_01140;product=DUF4625 domain-containing protein;protein_id=PDP44974.1;transl_table=11 NSLJ01000002.1 Genbank gene 91359 93521 . - . ID=gene-CLI86_01145;Name=CLI86_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01145 NSLJ01000002.1 Protein Homology CDS 91359 93521 . - 0 ID=cds-PDP44975.1;Parent=gene-CLI86_01145;Dbxref=NCBI_GP:PDP44975.1;Name=PDP44975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223974.1;locus_tag=CLI86_01145;product=TonB-dependent receptor;protein_id=PDP44975.1;transl_table=11 NSLJ01000002.1 Genbank gene 94295 94621 . - . ID=gene-CLI86_01150;Name=CLI86_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01150 NSLJ01000002.1 GeneMarkS+ CDS 94295 94621 . - 0 ID=cds-PDP44976.1;Parent=gene-CLI86_01150;Dbxref=NCBI_GP:PDP44976.1;Name=PDP44976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01150;product=hypothetical protein;protein_id=PDP44976.1;transl_table=11 NSLJ01000002.1 Genbank gene 94929 95447 . + . ID=gene-CLI86_01155;Name=CLI86_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01155 NSLJ01000002.1 Protein Homology CDS 94929 95447 . + 0 ID=cds-PDP44977.1;Parent=gene-CLI86_01155;Dbxref=NCBI_GP:PDP44977.1;Name=PDP44977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223976.1;locus_tag=CLI86_01155;product=hypothetical protein;protein_id=PDP44977.1;transl_table=11 NSLJ01000002.1 Genbank gene 95929 97302 . + . ID=gene-CLI86_01160;Name=CLI86_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01160 NSLJ01000002.1 Protein Homology CDS 95929 97302 . + 0 ID=cds-PDP44978.1;Parent=gene-CLI86_01160;Dbxref=NCBI_GP:PDP44978.1;Name=PDP44978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019246393.1;locus_tag=CLI86_01160;product=ATP-binding protein;protein_id=PDP44978.1;transl_table=11 NSLJ01000002.1 Genbank pseudogene 97982 98116 . + . ID=gene-CLI86_01165;Name=CLI86_01165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01165;pseudo=true NSLJ01000002.1 Protein Homology CDS 97982 98116 . + 0 ID=cds-CLI86_01165;Parent=gene-CLI86_01165;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098433.1;locus_tag=CLI86_01165;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000002.1 Genbank pseudogene 98090 98467 . - . ID=gene-CLI86_01170;Name=CLI86_01170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01170;pseudo=true NSLJ01000002.1 Protein Homology CDS 98090 98467 . - 0 ID=cds-CLI86_01170;Parent=gene-CLI86_01170;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_01170;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000002.1 Genbank gene 98919 99239 . + . ID=gene-CLI86_01175;Name=CLI86_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01175 NSLJ01000002.1 Protein Homology CDS 98919 99239 . + 0 ID=cds-PDP44979.1;Parent=gene-CLI86_01175;Dbxref=NCBI_GP:PDP44979.1;Name=PDP44979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098431.1;locus_tag=CLI86_01175;product=XRE family transcriptional regulator;protein_id=PDP44979.1;transl_table=11 NSLJ01000002.1 Genbank gene 99243 100511 . + . ID=gene-CLI86_01180;Name=CLI86_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01180 NSLJ01000002.1 Protein Homology CDS 99243 100511 . + 0 ID=cds-PDP44980.1;Parent=gene-CLI86_01180;Dbxref=NCBI_GP:PDP44980.1;Name=PDP44980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223982.1;locus_tag=CLI86_01180;product=type II toxin-antitoxin system HipA family toxin;protein_id=PDP44980.1;transl_table=11 NSLJ01000002.1 Genbank gene 100727 100951 . + . ID=gene-CLI86_01185;Name=CLI86_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01185 NSLJ01000002.1 Protein Homology CDS 100727 100951 . + 0 ID=cds-PDP45039.1;Parent=gene-CLI86_01185;Dbxref=NCBI_GP:PDP45039.1;Name=PDP45039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874043.1;locus_tag=CLI86_01185;product=transcriptional regulator;protein_id=PDP45039.1;transl_table=11 NSLJ01000002.1 Genbank gene 100948 101283 . + . ID=gene-CLI86_01190;Name=CLI86_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01190 NSLJ01000002.1 Protein Homology CDS 100948 101283 . + 0 ID=cds-PDP44981.1;Parent=gene-CLI86_01190;Dbxref=NCBI_GP:PDP44981.1;Name=PDP44981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874041.1;locus_tag=CLI86_01190;product=phosphatidylinositol kinase;protein_id=PDP44981.1;transl_table=11 NSLJ01000002.1 Genbank gene 101273 102208 . + . ID=gene-CLI86_01195;Name=CLI86_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01195 NSLJ01000002.1 Protein Homology CDS 101273 102208 . + 0 ID=cds-PDP45040.1;Parent=gene-CLI86_01195;Dbxref=NCBI_GP:PDP45040.1;Name=PDP45040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223986.1;locus_tag=CLI86_01195;product=toxin HipA;protein_id=PDP45040.1;transl_table=11 NSLJ01000002.1 Genbank gene 102312 103721 . - . ID=gene-CLI86_01200;Name=CLI86_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01200 NSLJ01000002.1 Protein Homology CDS 102312 103721 . - 0 ID=cds-PDP44982.1;Parent=gene-CLI86_01200;Dbxref=NCBI_GP:PDP44982.1;Name=PDP44982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223987.1;locus_tag=CLI86_01200;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=PDP44982.1;transl_table=11 NSLJ01000002.1 Genbank gene 103804 104655 . - . ID=gene-CLI86_01205;Name=CLI86_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01205 NSLJ01000002.1 Protein Homology CDS 103804 104655 . - 0 ID=cds-PDP44983.1;Parent=gene-CLI86_01205;Dbxref=NCBI_GP:PDP44983.1;Name=PDP44983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223988.1;locus_tag=CLI86_01205;product=DUF1460 domain-containing protein;protein_id=PDP44983.1;transl_table=11 NSLJ01000002.1 Genbank gene 104652 106685 . - . ID=gene-CLI86_01210;Name=CLI86_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01210 NSLJ01000002.1 Protein Homology CDS 104652 106685 . - 0 ID=cds-PDP44984.1;Parent=gene-CLI86_01210;Dbxref=NCBI_GP:PDP44984.1;Name=PDP44984.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223989.1;locus_tag=CLI86_01210;product=excinuclease ABC subunit UvrB;protein_id=PDP44984.1;transl_table=11 NSLJ01000002.1 Genbank gene 106675 106887 . - . ID=gene-CLI86_01215;Name=CLI86_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01215 NSLJ01000002.1 GeneMarkS+ CDS 106675 106887 . - 0 ID=cds-PDP44985.1;Parent=gene-CLI86_01215;Dbxref=NCBI_GP:PDP44985.1;Name=PDP44985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01215;product=hypothetical protein;protein_id=PDP44985.1;transl_table=11 NSLJ01000002.1 Genbank gene 106911 108563 . + . ID=gene-CLI86_01220;Name=CLI86_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01220 NSLJ01000002.1 Protein Homology CDS 106911 108563 . + 0 ID=cds-PDP44986.1;Parent=gene-CLI86_01220;Dbxref=NCBI_GP:PDP44986.1;Name=PDP44986.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_01220;product=T9SS C-terminal target domain-containing protein;protein_id=PDP44986.1;transl_table=11 NSLJ01000002.1 Genbank gene 108684 109415 . - . ID=gene-CLI86_01225;Name=CLI86_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01225 NSLJ01000002.1 Protein Homology CDS 108684 109415 . - 0 ID=cds-PDP44987.1;Parent=gene-CLI86_01225;Dbxref=NCBI_GP:PDP44987.1;Name=PDP44987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861801.1;locus_tag=CLI86_01225;product=copper homeostasis protein CutC;protein_id=PDP44987.1;transl_table=11 NSLJ01000002.1 Genbank gene 109431 110744 . - . ID=gene-CLI86_01230;Name=CLI86_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01230 NSLJ01000002.1 Protein Homology CDS 109431 110744 . - 0 ID=cds-PDP44988.1;Parent=gene-CLI86_01230;Dbxref=NCBI_GP:PDP44988.1;Name=PDP44988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780420.1;locus_tag=CLI86_01230;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=PDP44988.1;transl_table=11 NSLJ01000002.1 Genbank gene 110872 112203 . + . ID=gene-CLI86_01235;Name=CLI86_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01235 NSLJ01000002.1 GeneMarkS+ CDS 110872 112203 . + 0 ID=cds-PDP44989.1;Parent=gene-CLI86_01235;Dbxref=NCBI_GP:PDP44989.1;Name=PDP44989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01235;product=hypothetical protein;protein_id=PDP44989.1;transl_table=11 NSLJ01000002.1 Genbank gene 112254 113480 . + . ID=gene-CLI86_01240;Name=CLI86_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01240 NSLJ01000002.1 GeneMarkS+ CDS 112254 113480 . + 0 ID=cds-PDP44990.1;Parent=gene-CLI86_01240;Dbxref=NCBI_GP:PDP44990.1;Name=PDP44990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01240;product=hypothetical protein;protein_id=PDP44990.1;transl_table=11 NSLJ01000002.1 Genbank gene 113455 114642 . + . ID=gene-CLI86_01245;Name=CLI86_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01245 NSLJ01000002.1 Protein Homology CDS 113455 114642 . + 0 ID=cds-PDP44991.1;Parent=gene-CLI86_01245;Dbxref=NCBI_GP:PDP44991.1;Name=PDP44991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223997.1;locus_tag=CLI86_01245;product=glycosyl transferase family 1;protein_id=PDP44991.1;transl_table=11 NSLJ01000002.1 Genbank gene 114632 115693 . + . ID=gene-CLI86_01250;Name=CLI86_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01250 NSLJ01000002.1 Protein Homology CDS 114632 115693 . + 0 ID=cds-PDP44992.1;Parent=gene-CLI86_01250;Dbxref=NCBI_GP:PDP44992.1;Name=PDP44992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223998.1;locus_tag=CLI86_01250;product=radical SAM protein;protein_id=PDP44992.1;transl_table=11 NSLJ01000002.1 Genbank gene 115690 116808 . + . ID=gene-CLI86_01255;Name=CLI86_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01255 NSLJ01000002.1 Protein Homology CDS 115690 116808 . + 0 ID=cds-PDP44993.1;Parent=gene-CLI86_01255;Dbxref=NCBI_GP:PDP44993.1;Name=PDP44993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223999.1;locus_tag=CLI86_01255;product=glycosyl transferase family 1;protein_id=PDP44993.1;transl_table=11 NSLJ01000002.1 Genbank gene 116797 117993 . - . ID=gene-CLI86_01260;Name=CLI86_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01260 NSLJ01000002.1 GeneMarkS+ CDS 116797 117993 . - 0 ID=cds-PDP44994.1;Parent=gene-CLI86_01260;Dbxref=NCBI_GP:PDP44994.1;Name=PDP44994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01260;product=hypothetical protein;protein_id=PDP44994.1;transl_table=11 NSLJ01000002.1 Genbank gene 118002 118808 . - . ID=gene-CLI86_01265;Name=CLI86_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01265 NSLJ01000002.1 Protein Homology CDS 118002 118808 . - 0 ID=cds-PDP44995.1;Parent=gene-CLI86_01265;Dbxref=NCBI_GP:PDP44995.1;Name=PDP44995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04991.11;locus_tag=CLI86_01265;product=LicD family protein;protein_id=PDP44995.1;transl_table=11 NSLJ01000002.1 Genbank gene 118792 120198 . - . ID=gene-CLI86_01270;Name=CLI86_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01270 NSLJ01000002.1 Protein Homology CDS 118792 120198 . - 0 ID=cds-PDP45041.1;Parent=gene-CLI86_01270;Dbxref=NCBI_GP:PDP45041.1;Name=PDP45041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224002.1;locus_tag=CLI86_01270;product=hypothetical protein;protein_id=PDP45041.1;transl_table=11 NSLJ01000002.1 Genbank gene 120195 121022 . - . ID=gene-CLI86_01275;Name=CLI86_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01275 NSLJ01000002.1 Protein Homology CDS 120195 121022 . - 0 ID=cds-PDP44996.1;Parent=gene-CLI86_01275;Dbxref=NCBI_GP:PDP44996.1;Name=PDP44996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03009.15;locus_tag=CLI86_01275;product=hypothetical protein;protein_id=PDP44996.1;transl_table=11 NSLJ01000002.1 Genbank gene 121034 122635 . - . ID=gene-CLI86_01280;Name=CLI86_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01280 NSLJ01000002.1 Protein Homology CDS 121034 122635 . - 0 ID=cds-PDP45042.1;Parent=gene-CLI86_01280;Dbxref=NCBI_GP:PDP45042.1;Name=PDP45042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224004.1;locus_tag=CLI86_01280;product=tyrosine protein kinase;protein_id=PDP45042.1;transl_table=11 NSLJ01000002.1 Genbank gene 122644 123453 . - . ID=gene-CLI86_01285;Name=CLI86_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01285 NSLJ01000002.1 Protein Homology CDS 122644 123453 . - 0 ID=cds-PDP44997.1;Parent=gene-CLI86_01285;Dbxref=NCBI_GP:PDP44997.1;Name=PDP44997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224005.1;locus_tag=CLI86_01285;product=sugar transporter;protein_id=PDP44997.1;transl_table=11 NSLJ01000002.1 Genbank gene 123774 124235 . - . ID=gene-CLI86_01290;Name=CLI86_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01290 NSLJ01000002.1 Protein Homology CDS 123774 124235 . - 0 ID=cds-PDP44998.1;Parent=gene-CLI86_01290;Dbxref=NCBI_GP:PDP44998.1;Name=PDP44998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316776.1;locus_tag=CLI86_01290;product=V-type ATP synthase subunit K;protein_id=PDP44998.1;transl_table=11 NSLJ01000002.1 Genbank gene 124286 126160 . - . ID=gene-CLI86_01295;Name=CLI86_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01295 NSLJ01000002.1 Protein Homology CDS 124286 126160 . - 0 ID=cds-PDP44999.1;Parent=gene-CLI86_01295;Dbxref=NCBI_GP:PDP44999.1;Name=PDP44999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224007.1;locus_tag=CLI86_01295;product=V-type ATP synthase subunit I;protein_id=PDP44999.1;transl_table=11 NSLJ01000002.1 Genbank gene 126157 126777 . - . ID=gene-CLI86_01300;Name=CLI86_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01300 NSLJ01000002.1 Protein Homology CDS 126157 126777 . - 0 ID=cds-PDP45000.1;Parent=gene-CLI86_01300;Dbxref=NCBI_GP:PDP45000.1;Name=PDP45000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007761831.1;locus_tag=CLI86_01300;product=V-type ATP synthase subunit D;protein_id=PDP45000.1;transl_table=11 NSLJ01000002.1 Genbank gene 126809 128134 . - . ID=gene-CLI86_01305;Name=CLI86_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01305 NSLJ01000002.1 Protein Homology CDS 126809 128134 . - 0 ID=cds-PDP45001.1;Parent=gene-CLI86_01305;Dbxref=NCBI_GP:PDP45001.1;Name=PDP45001.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224009.1;locus_tag=CLI86_01305;product=V-type ATP synthase subunit B;protein_id=PDP45001.1;transl_table=11 NSLJ01000002.1 Genbank gene 128141 129898 . - . ID=gene-CLI86_01310;Name=CLI86_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01310 NSLJ01000002.1 Protein Homology CDS 128141 129898 . - 0 ID=cds-PDP45002.1;Parent=gene-CLI86_01310;Dbxref=NCBI_GP:PDP45002.1;Name=PDP45002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005638776.1;locus_tag=CLI86_01310;product=V-type ATP synthase subunit A;protein_id=PDP45002.1;transl_table=11 NSLJ01000002.1 Genbank gene 129902 130771 . - . ID=gene-CLI86_01315;Name=CLI86_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01315 NSLJ01000002.1 Protein Homology CDS 129902 130771 . - 0 ID=cds-PDP45003.1;Parent=gene-CLI86_01315;Dbxref=NCBI_GP:PDP45003.1;Name=PDP45003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772321.1;locus_tag=CLI86_01315;product=hypothetical protein;protein_id=PDP45003.1;transl_table=11 NSLJ01000002.1 Genbank gene 130771 131361 . - . ID=gene-CLI86_01320;Name=CLI86_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01320 NSLJ01000002.1 Protein Homology CDS 130771 131361 . - 0 ID=cds-PDP45004.1;Parent=gene-CLI86_01320;Dbxref=NCBI_GP:PDP45004.1;Name=PDP45004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008148526.1;locus_tag=CLI86_01320;product=hypothetical protein;protein_id=PDP45004.1;transl_table=11 NSLJ01000002.1 Genbank gene 131628 134789 . + . ID=gene-CLI86_01325;Name=CLI86_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01325 NSLJ01000002.1 Protein Homology CDS 131628 134789 . + 0 ID=cds-PDP45005.1;Parent=gene-CLI86_01325;Dbxref=NCBI_GP:PDP45005.1;Name=PDP45005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07495.11%2CHMM:PF07730.11;locus_tag=CLI86_01325;product=hypothetical protein;protein_id=PDP45005.1;transl_table=11 NSLJ01000002.1 Genbank gene 134998 135639 . + . ID=gene-CLI86_01330;Name=CLI86_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01330 NSLJ01000002.1 Protein Homology CDS 134998 135639 . + 0 ID=cds-PDP45006.1;Parent=gene-CLI86_01330;Dbxref=NCBI_GP:PDP45006.1;Name=PDP45006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009280665.1;locus_tag=CLI86_01330;product=DNA-binding response regulator;protein_id=PDP45006.1;transl_table=11 NSLJ01000002.1 Genbank gene 136325 138259 . - . ID=gene-CLI86_01335;Name=CLI86_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01335 NSLJ01000002.1 GeneMarkS+ CDS 136325 138259 . - 0 ID=cds-PDP45007.1;Parent=gene-CLI86_01335;Dbxref=NCBI_GP:PDP45007.1;Name=PDP45007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01335;product=hypothetical protein;protein_id=PDP45007.1;transl_table=11 NSLJ01000002.1 Genbank gene 138356 138829 . - . ID=gene-CLI86_01340;Name=CLI86_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01340 NSLJ01000002.1 Protein Homology CDS 138356 138829 . - 0 ID=cds-PDP45008.1;Parent=gene-CLI86_01340;Dbxref=NCBI_GP:PDP45008.1;Name=PDP45008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018278553.1;locus_tag=CLI86_01340;product=DUF559 domain-containing protein;protein_id=PDP45008.1;transl_table=11 NSLJ01000002.1 Genbank gene 139107 148376 . - . ID=gene-CLI86_01345;Name=CLI86_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01345 NSLJ01000002.1 Protein Homology CDS 139107 148376 . - 0 ID=cds-PDP45009.1;Parent=gene-CLI86_01345;Dbxref=NCBI_GP:PDP45009.1;Name=PDP45009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02542;locus_tag=CLI86_01345;product=hypothetical protein;protein_id=PDP45009.1;transl_table=11 NSLJ01000002.1 Genbank gene 148360 150006 . - . ID=gene-CLI86_01350;Name=CLI86_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01350 NSLJ01000002.1 GeneMarkS+ CDS 148360 150006 . - 0 ID=cds-PDP45010.1;Parent=gene-CLI86_01350;Dbxref=NCBI_GP:PDP45010.1;Name=PDP45010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01350;product=hypothetical protein;protein_id=PDP45010.1;transl_table=11 NSLJ01000002.1 Genbank gene 150402 150647 . + . ID=gene-CLI86_01355;Name=CLI86_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01355 NSLJ01000002.1 Protein Homology CDS 150402 150647 . + 0 ID=cds-PDP45011.1;Parent=gene-CLI86_01355;Dbxref=NCBI_GP:PDP45011.1;Name=PDP45011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226127.1;locus_tag=CLI86_01355;product=hypothetical protein;protein_id=PDP45011.1;transl_table=11 NSLJ01000002.1 Genbank gene 150878 153112 . - . ID=gene-CLI86_01360;Name=CLI86_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01360 NSLJ01000002.1 Protein Homology CDS 150878 153112 . - 0 ID=cds-PDP45012.1;Parent=gene-CLI86_01360;Dbxref=NCBI_GP:PDP45012.1;Name=PDP45012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13306.4;locus_tag=CLI86_01360;product=hypothetical protein;protein_id=PDP45012.1;transl_table=11 NSLJ01000002.1 Genbank gene 153705 155507 . - . ID=gene-CLI86_01365;Name=CLI86_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01365 NSLJ01000002.1 Protein Homology CDS 153705 155507 . - 0 ID=cds-PDP45013.1;Parent=gene-CLI86_01365;Dbxref=NCBI_GP:PDP45013.1;Name=PDP45013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13306.4;locus_tag=CLI86_01365;product=hypothetical protein;protein_id=PDP45013.1;transl_table=11 NSLJ01000002.1 Genbank gene 156223 156834 . - . ID=gene-CLI86_01370;Name=CLI86_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01370 NSLJ01000002.1 GeneMarkS+ CDS 156223 156834 . - 0 ID=cds-PDP45014.1;Parent=gene-CLI86_01370;Dbxref=NCBI_GP:PDP45014.1;Name=PDP45014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01370;product=hypothetical protein;protein_id=PDP45014.1;transl_table=11 NSLJ01000002.1 Genbank gene 157268 157525 . - . ID=gene-CLI86_01375;Name=CLI86_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01375 NSLJ01000002.1 Protein Homology CDS 157268 157525 . - 0 ID=cds-PDP45015.1;Parent=gene-CLI86_01375;Dbxref=NCBI_GP:PDP45015.1;Name=PDP45015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224029.1;locus_tag=CLI86_01375;product=outer membrane assembly protein;protein_id=PDP45015.1;transl_table=11 NSLJ01000002.1 Genbank gene 157546 158547 . - . ID=gene-CLI86_01380;Name=CLI86_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01380 NSLJ01000002.1 Protein Homology CDS 157546 158547 . - 0 ID=cds-PDP45016.1;Parent=gene-CLI86_01380;Dbxref=NCBI_GP:PDP45016.1;Name=PDP45016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224030.1;locus_tag=CLI86_01380;product=hypothetical protein;protein_id=PDP45016.1;transl_table=11 NSLJ01000002.1 Genbank gene 158589 159977 . - . ID=gene-CLI86_01385;Name=CLI86_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01385 NSLJ01000002.1 Protein Homology CDS 158589 159977 . - 0 ID=cds-PDP45043.1;Parent=gene-CLI86_01385;Dbxref=NCBI_GP:PDP45043.1;Name=PDP45043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224031.1;locus_tag=CLI86_01385;product=hypothetical protein;protein_id=PDP45043.1;transl_table=11 NSLJ01000002.1 Genbank gene 160064 160702 . - . ID=gene-CLI86_01390;Name=CLI86_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01390 NSLJ01000002.1 Protein Homology CDS 160064 160702 . - 0 ID=cds-PDP45017.1;Parent=gene-CLI86_01390;Dbxref=NCBI_GP:PDP45017.1;Name=PDP45017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01026.19;locus_tag=CLI86_01390;product=hydrolase TatD;protein_id=PDP45017.1;transl_table=11 NSLJ01000002.1 Genbank gene 160722 160946 . - . ID=gene-CLI86_01395;Name=CLI86_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01395 NSLJ01000002.1 Protein Homology CDS 160722 160946 . - 0 ID=cds-PDP45018.1;Parent=gene-CLI86_01395;Dbxref=NCBI_GP:PDP45018.1;Name=PDP45018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146842.1;locus_tag=CLI86_01395;product=membrane protein insertion efficiency factor YidD;protein_id=PDP45018.1;transl_table=11 NSLJ01000002.1 Genbank gene 160928 161341 . - . ID=gene-CLI86_01400;Name=CLI86_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01400 NSLJ01000002.1 Protein Homology CDS 160928 161341 . - 0 ID=cds-PDP45019.1;Parent=gene-CLI86_01400;Dbxref=NCBI_GP:PDP45019.1;Name=PDP45019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00825.16;locus_tag=CLI86_01400;product=ribonuclease P protein component;protein_id=PDP45019.1;transl_table=11 NSLJ01000002.1 Genbank gene 161328 162104 . - . ID=gene-CLI86_01405;Name=CLI86_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01405 NSLJ01000002.1 Protein Homology CDS 161328 162104 . - 0 ID=cds-PDP45020.1;Parent=gene-CLI86_01405;Dbxref=NCBI_GP:PDP45020.1;Name=PDP45020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224035.1;locus_tag=CLI86_01405;product=uroporphyrinogen-III synthase;protein_id=PDP45020.1;transl_table=11 NSLJ01000002.1 Genbank gene 162095 162826 . - . ID=gene-CLI86_01410;Name=CLI86_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01410 NSLJ01000002.1 Protein Homology CDS 162095 162826 . - 0 ID=cds-PDP45021.1;Parent=gene-CLI86_01410;Dbxref=NCBI_GP:PDP45021.1;Name=PDP45021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14093.4;locus_tag=CLI86_01410;product=DUF4271 domain-containing protein;protein_id=PDP45021.1;transl_table=11 NSLJ01000002.1 Genbank gene 162946 164514 . + . ID=gene-CLI86_01415;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CLI86_01415 NSLJ01000002.1 Protein Homology CDS 162946 164514 . + 0 ID=cds-PDP45022.1;Parent=gene-CLI86_01415;Dbxref=NCBI_GP:PDP45022.1;Name=PDP45022.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224037.1;locus_tag=CLI86_01415;product=L-aspartate oxidase;protein_id=PDP45022.1;transl_table=11 NSLJ01000002.1 Genbank gene 164549 165136 . + . ID=gene-CLI86_01420;Name=CLI86_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01420 NSLJ01000002.1 Protein Homology CDS 164549 165136 . + 0 ID=cds-PDP45044.1;Parent=gene-CLI86_01420;Dbxref=NCBI_GP:PDP45044.1;Name=PDP45044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224038.1;locus_tag=CLI86_01420;product=RNA polymerase sigma-70 factor;protein_id=PDP45044.1;transl_table=11 NSLJ01000002.1 Genbank gene 165208 166206 . + . ID=gene-CLI86_01425;Name=CLI86_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01425 NSLJ01000002.1 Protein Homology CDS 165208 166206 . + 0 ID=cds-PDP45023.1;Parent=gene-CLI86_01425;Dbxref=NCBI_GP:PDP45023.1;Name=PDP45023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04773.11;locus_tag=CLI86_01425;product=hypothetical protein;protein_id=PDP45023.1;transl_table=11 NSLJ01000002.1 Genbank gene 166328 169723 . + . ID=gene-CLI86_01430;Name=CLI86_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01430 NSLJ01000002.1 Protein Homology CDS 166328 169723 . + 0 ID=cds-PDP45024.1;Parent=gene-CLI86_01430;Dbxref=NCBI_GP:PDP45024.1;Name=PDP45024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_01430;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP45024.1;transl_table=11 NSLJ01000002.1 Genbank gene 169742 171454 . + . ID=gene-CLI86_01435;Name=CLI86_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01435 NSLJ01000002.1 Protein Homology CDS 169742 171454 . + 0 ID=cds-PDP45025.1;Parent=gene-CLI86_01435;Dbxref=NCBI_GP:PDP45025.1;Name=PDP45025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9%2CHMM:PF14322.4;locus_tag=CLI86_01435;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP45025.1;transl_table=11 NSLJ01000002.1 Genbank gene 171539 173254 . + . ID=gene-CLI86_01440;Name=CLI86_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01440 NSLJ01000002.1 Protein Homology CDS 171539 173254 . + 0 ID=cds-PDP45026.1;Parent=gene-CLI86_01440;Dbxref=NCBI_GP:PDP45026.1;Name=PDP45026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008662177.1;locus_tag=CLI86_01440;product=FAD-dependent oxidoreductase;protein_id=PDP45026.1;transl_table=11 ##sequence-region NSLJ01000030.1 1 41901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000030.1 Genbank region 1 41901 . + . ID=NSLJ01000030.1:1..41901;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000030.1 Genbank gene 1 146 . - . ID=gene-CLI86_10415;Name=CLI86_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10415;partial=true;start_range=.,1 NSLJ01000030.1 Protein Homology CDS 1 146 . - 0 ID=cds-PDP43006.1;Parent=gene-CLI86_10415;Dbxref=NCBI_GP:PDP43006.1;Name=PDP43006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_10415;partial=true;product=IS1595 family transposase;protein_id=PDP43006.1;start_range=.,1;transl_table=11 NSLJ01000030.1 Genbank pseudogene 351 605 . + . ID=gene-CLI86_10420;Name=CLI86_10420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_10420;pseudo=true NSLJ01000030.1 Protein Homology CDS 351 605 . + 0 ID=cds-CLI86_10420;Parent=gene-CLI86_10420;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013243561.1;locus_tag=CLI86_10420;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000030.1 Genbank gene 699 1802 . + . ID=gene-CLI86_10425;Name=CLI86_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10425 NSLJ01000030.1 Protein Homology CDS 699 1802 . + 0 ID=cds-PDP43007.1;Parent=gene-CLI86_10425;Dbxref=NCBI_GP:PDP43007.1;Name=PDP43007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225734.1;locus_tag=CLI86_10425;product=MBL fold metallo-hydrolase;protein_id=PDP43007.1;transl_table=11 NSLJ01000030.1 Genbank gene 1921 2412 . + . ID=gene-CLI86_10430;Name=CLI86_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10430 NSLJ01000030.1 Protein Homology CDS 1921 2412 . + 0 ID=cds-PDP43008.1;Parent=gene-CLI86_10430;Dbxref=NCBI_GP:PDP43008.1;Name=PDP43008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009410017.1;locus_tag=CLI86_10430;product=DNA polymerase III subunit epsilon;protein_id=PDP43008.1;transl_table=11 NSLJ01000030.1 Genbank gene 2835 3014 . - . ID=gene-CLI86_10435;Name=CLI86_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10435 NSLJ01000030.1 GeneMarkS+ CDS 2835 3014 . - 0 ID=cds-PDP43009.1;Parent=gene-CLI86_10435;Dbxref=NCBI_GP:PDP43009.1;Name=PDP43009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10435;product=hypothetical protein;protein_id=PDP43009.1;transl_table=11 NSLJ01000030.1 Genbank gene 3038 6067 . + . ID=gene-CLI86_10440;Name=CLI86_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10440 NSLJ01000030.1 Protein Homology CDS 3038 6067 . + 0 ID=cds-PDP43010.1;Parent=gene-CLI86_10440;Dbxref=NCBI_GP:PDP43010.1;Name=PDP43010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225738.1;locus_tag=CLI86_10440;product=SusC/RagA family protein;protein_id=PDP43010.1;transl_table=11 NSLJ01000030.1 Genbank gene 6090 7724 . + . ID=gene-CLI86_10445;Name=CLI86_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10445 NSLJ01000030.1 Protein Homology CDS 6090 7724 . + 0 ID=cds-PDP43011.1;Parent=gene-CLI86_10445;Dbxref=NCBI_GP:PDP43011.1;Name=PDP43011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225739.1;locus_tag=CLI86_10445;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43011.1;transl_table=11 NSLJ01000030.1 Genbank gene 7724 9271 . + . ID=gene-CLI86_10450;Name=CLI86_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10450 NSLJ01000030.1 Protein Homology CDS 7724 9271 . + 0 ID=cds-PDP43012.1;Parent=gene-CLI86_10450;Dbxref=NCBI_GP:PDP43012.1;Name=PDP43012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225740.1;locus_tag=CLI86_10450;product=hypothetical protein;protein_id=PDP43012.1;transl_table=11 NSLJ01000030.1 Genbank gene 9296 10756 . + . ID=gene-CLI86_10455;Name=CLI86_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10455 NSLJ01000030.1 Protein Homology CDS 9296 10756 . + 0 ID=cds-PDP43013.1;Parent=gene-CLI86_10455;Dbxref=NCBI_GP:PDP43013.1;Name=PDP43013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225741.1;locus_tag=CLI86_10455;product=cytochrome C biosynthesis protein;protein_id=PDP43013.1;transl_table=11 NSLJ01000030.1 cmsearch riboswitch 11146 11241 . + . ID=id-NSLJ01000030.1:11146..11241;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000030.1 Genbank gene 11296 13494 . + . ID=gene-CLI86_10460;Name=CLI86_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10460 NSLJ01000030.1 Protein Homology CDS 11296 13494 . + 0 ID=cds-PDP43014.1;Parent=gene-CLI86_10460;Dbxref=NCBI_GP:PDP43014.1;Name=PDP43014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225742.1;locus_tag=CLI86_10460;product=TonB-dependent receptor;protein_id=PDP43014.1;transl_table=11 NSLJ01000030.1 Genbank gene 13566 14192 . + . ID=gene-CLI86_10465;Name=CLI86_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10465 NSLJ01000030.1 Protein Homology CDS 13566 14192 . + 0 ID=cds-PDP43015.1;Parent=gene-CLI86_10465;Dbxref=NCBI_GP:PDP43015.1;Name=PDP43015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225743.1;locus_tag=CLI86_10465;product=hypothetical protein;protein_id=PDP43015.1;transl_table=11 NSLJ01000030.1 Genbank gene 14180 16654 . - . ID=gene-CLI86_10470;Name=CLI86_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10470 NSLJ01000030.1 Protein Homology CDS 14180 16654 . - 0 ID=cds-PDP43036.1;Parent=gene-CLI86_10470;Dbxref=NCBI_GP:PDP43036.1;Name=PDP43036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005633184.1;locus_tag=CLI86_10470;product=bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase;protein_id=PDP43036.1;transl_table=11 NSLJ01000030.1 Genbank gene 16657 17649 . - . ID=gene-CLI86_10475;Name=CLI86_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10475 NSLJ01000030.1 Protein Homology CDS 16657 17649 . - 0 ID=cds-PDP43016.1;Parent=gene-CLI86_10475;Dbxref=NCBI_GP:PDP43016.1;Name=PDP43016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225745.1;locus_tag=CLI86_10475;product=GSCFA domain protein;protein_id=PDP43016.1;transl_table=11 NSLJ01000030.1 Genbank gene 18170 19585 . + . ID=gene-CLI86_10480;Name=CLI86_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10480 NSLJ01000030.1 Protein Homology CDS 18170 19585 . + 0 ID=cds-PDP43037.1;Parent=gene-CLI86_10480;Dbxref=NCBI_GP:PDP43037.1;Name=PDP43037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225747.1;locus_tag=CLI86_10480;product=peptidoglycan-binding protein;protein_id=PDP43037.1;transl_table=11 NSLJ01000030.1 Genbank gene 19669 20217 . + . ID=gene-CLI86_10485;Name=CLI86_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10485 NSLJ01000030.1 Protein Homology CDS 19669 20217 . + 0 ID=cds-PDP43017.1;Parent=gene-CLI86_10485;Dbxref=NCBI_GP:PDP43017.1;Name=PDP43017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225748.1;locus_tag=CLI86_10485;product=DUF1599 domain-containing protein;protein_id=PDP43017.1;transl_table=11 NSLJ01000030.1 Genbank gene 20210 21481 . + . ID=gene-CLI86_10490;Name=CLI86_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10490 NSLJ01000030.1 Protein Homology CDS 20210 21481 . + 0 ID=cds-PDP43018.1;Parent=gene-CLI86_10490;Dbxref=NCBI_GP:PDP43018.1;Name=PDP43018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860979.1;locus_tag=CLI86_10490;product=DoxX family protein;protein_id=PDP43018.1;transl_table=11 NSLJ01000030.1 Genbank gene 21494 22249 . + . ID=gene-CLI86_10495;Name=CLI86_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10495 NSLJ01000030.1 Protein Homology CDS 21494 22249 . + 0 ID=cds-PDP43019.1;Parent=gene-CLI86_10495;Dbxref=NCBI_GP:PDP43019.1;Name=PDP43019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866575.1;locus_tag=CLI86_10495;product=triose-phosphate isomerase;protein_id=PDP43019.1;transl_table=11 NSLJ01000030.1 Genbank gene 22282 22758 . + . ID=gene-CLI86_10500;Name=CLI86_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10500 NSLJ01000030.1 Protein Homology CDS 22282 22758 . + 0 ID=cds-PDP43020.1;Parent=gene-CLI86_10500;Dbxref=NCBI_GP:PDP43020.1;Name=PDP43020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225751.1;locus_tag=CLI86_10500;product=SPOR domain-containing protein;protein_id=PDP43020.1;transl_table=11 NSLJ01000030.1 Genbank gene 22761 23342 . + . ID=gene-CLI86_10505;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CLI86_10505 NSLJ01000030.1 Protein Homology CDS 22761 23342 . + 0 ID=cds-PDP43021.1;Parent=gene-CLI86_10505;Dbxref=NCBI_GP:PDP43021.1;Name=PDP43021.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225752.1;locus_tag=CLI86_10505;product=GTP cyclohydrolase I FolE;protein_id=PDP43021.1;transl_table=11 NSLJ01000030.1 Genbank gene 23406 24020 . + . ID=gene-CLI86_10510;Name=CLI86_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10510 NSLJ01000030.1 Protein Homology CDS 23406 24020 . + 0 ID=cds-PDP43022.1;Parent=gene-CLI86_10510;Dbxref=NCBI_GP:PDP43022.1;Name=PDP43022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841655.1;locus_tag=CLI86_10510;product=threonylcarbamoyl-AMP synthase;protein_id=PDP43022.1;transl_table=11 NSLJ01000030.1 Genbank gene 24133 24372 . - . ID=gene-CLI86_10515;Name=CLI86_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10515 NSLJ01000030.1 GeneMarkS+ CDS 24133 24372 . - 0 ID=cds-PDP43023.1;Parent=gene-CLI86_10515;Dbxref=NCBI_GP:PDP43023.1;Name=PDP43023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10515;product=hypothetical protein;protein_id=PDP43023.1;transl_table=11 NSLJ01000030.1 Genbank gene 24426 25031 . - . ID=gene-CLI86_10520;Name=CLI86_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10520 NSLJ01000030.1 Protein Homology CDS 24426 25031 . - 0 ID=cds-PDP43024.1;Parent=gene-CLI86_10520;Dbxref=NCBI_GP:PDP43024.1;Name=PDP43024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225755.1;locus_tag=CLI86_10520;product=RNA polymerase sigma-70 factor;protein_id=PDP43024.1;transl_table=11 NSLJ01000030.1 Genbank gene 25346 26986 . + . ID=gene-CLI86_10525;Name=CLI86_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10525 NSLJ01000030.1 Protein Homology CDS 25346 26986 . + 0 ID=cds-PDP43038.1;Parent=gene-CLI86_10525;Dbxref=NCBI_GP:PDP43038.1;Name=PDP43038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010802821.1;locus_tag=CLI86_10525;product=dipeptidase;protein_id=PDP43038.1;transl_table=11 NSLJ01000030.1 Genbank gene 27016 27483 . + . ID=gene-CLI86_10530;Name=CLI86_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10530 NSLJ01000030.1 Protein Homology CDS 27016 27483 . + 0 ID=cds-PDP43025.1;Parent=gene-CLI86_10530;Dbxref=NCBI_GP:PDP43025.1;Name=PDP43025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008158267.1;locus_tag=CLI86_10530;product=hypothetical protein;protein_id=PDP43025.1;transl_table=11 NSLJ01000030.1 Genbank gene 27649 30255 . - . ID=gene-CLI86_10535;Name=CLI86_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10535 NSLJ01000030.1 Protein Homology CDS 27649 30255 . - 0 ID=cds-PDP43026.1;Parent=gene-CLI86_10535;Dbxref=NCBI_GP:PDP43026.1;Name=PDP43026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018967065.1;locus_tag=CLI86_10535;product=TonB-dependent receptor;protein_id=PDP43026.1;transl_table=11 NSLJ01000030.1 Genbank gene 31146 31730 . + . ID=gene-CLI86_10540;Name=CLI86_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10540 NSLJ01000030.1 Protein Homology CDS 31146 31730 . + 0 ID=cds-PDP43027.1;Parent=gene-CLI86_10540;Dbxref=NCBI_GP:PDP43027.1;Name=PDP43027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008153270.1;locus_tag=CLI86_10540;product=peptidylprolyl isomerase;protein_id=PDP43027.1;transl_table=11 NSLJ01000030.1 Genbank gene 31763 32479 . + . ID=gene-CLI86_10545;Name=CLI86_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10545 NSLJ01000030.1 Protein Homology CDS 31763 32479 . + 0 ID=cds-PDP43028.1;Parent=gene-CLI86_10545;Dbxref=NCBI_GP:PDP43028.1;Name=PDP43028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860960.1;locus_tag=CLI86_10545;product=peptidylprolyl isomerase;protein_id=PDP43028.1;transl_table=11 NSLJ01000030.1 Genbank gene 32494 33231 . + . ID=gene-CLI86_10550;Name=CLI86_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10550 NSLJ01000030.1 Protein Homology CDS 32494 33231 . + 0 ID=cds-PDP43039.1;Parent=gene-CLI86_10550;Dbxref=NCBI_GP:PDP43039.1;Name=PDP43039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225763.1;locus_tag=CLI86_10550;product=peptidylprolyl isomerase;protein_id=PDP43039.1;transl_table=11 NSLJ01000030.1 Genbank gene 33429 34868 . + . ID=gene-CLI86_10555;Name=CLI86_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10555 NSLJ01000030.1 Protein Homology CDS 33429 34868 . + 0 ID=cds-PDP43029.1;Parent=gene-CLI86_10555;Dbxref=NCBI_GP:PDP43029.1;Name=PDP43029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225764.1;locus_tag=CLI86_10555;product=transglutaminase;protein_id=PDP43029.1;transl_table=11 NSLJ01000030.1 Genbank gene 34979 35869 . + . ID=gene-CLI86_10560;Name=CLI86_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10560 NSLJ01000030.1 Protein Homology CDS 34979 35869 . + 0 ID=cds-PDP43030.1;Parent=gene-CLI86_10560;Dbxref=NCBI_GP:PDP43030.1;Name=PDP43030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645227.1;locus_tag=CLI86_10560;product=hydroxypyruvate isomerase;protein_id=PDP43030.1;transl_table=11 NSLJ01000030.1 Genbank gene 35975 37345 . + . ID=gene-CLI86_10565;Name=CLI86_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10565 NSLJ01000030.1 Protein Homology CDS 35975 37345 . + 0 ID=cds-PDP43040.1;Parent=gene-CLI86_10565;Dbxref=NCBI_GP:PDP43040.1;Name=PDP43040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010185528.1;locus_tag=CLI86_10565;product=glycosyl hydrolase;protein_id=PDP43040.1;transl_table=11 NSLJ01000030.1 Genbank gene 37354 37614 . + . ID=gene-CLI86_10570;Name=CLI86_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10570 NSLJ01000030.1 Protein Homology CDS 37354 37614 . + 0 ID=cds-PDP43031.1;Parent=gene-CLI86_10570;Dbxref=NCBI_GP:PDP43031.1;Name=PDP43031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225766.1;locus_tag=CLI86_10570;product=thioredoxin;protein_id=PDP43031.1;transl_table=11 NSLJ01000030.1 Genbank gene 37780 38304 . - . ID=gene-CLI86_10575;Name=CLI86_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10575 NSLJ01000030.1 Protein Homology CDS 37780 38304 . - 0 ID=cds-PDP43032.1;Parent=gene-CLI86_10575;Dbxref=NCBI_GP:PDP43032.1;Name=PDP43032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225768.1;locus_tag=CLI86_10575;product=hypothetical protein;protein_id=PDP43032.1;transl_table=11 NSLJ01000030.1 Genbank gene 38291 39526 . - . ID=gene-CLI86_10580;Name=CLI86_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10580 NSLJ01000030.1 Protein Homology CDS 38291 39526 . - 0 ID=cds-PDP43033.1;Parent=gene-CLI86_10580;Dbxref=NCBI_GP:PDP43033.1;Name=PDP43033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225769.1;locus_tag=CLI86_10580;product=hemerythrin;protein_id=PDP43033.1;transl_table=11 NSLJ01000030.1 Genbank gene 39583 39912 . - . ID=gene-CLI86_10585;Name=CLI86_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10585 NSLJ01000030.1 Protein Homology CDS 39583 39912 . - 0 ID=cds-PDP43034.1;Parent=gene-CLI86_10585;Dbxref=NCBI_GP:PDP43034.1;Name=PDP43034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225770.1;locus_tag=CLI86_10585;product=cupin domain-containing protein;protein_id=PDP43034.1;transl_table=11 NSLJ01000030.1 Genbank gene 40076 41764 . - . ID=gene-CLI86_10590;Name=CLI86_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10590 NSLJ01000030.1 Protein Homology CDS 40076 41764 . - 0 ID=cds-PDP43035.1;Parent=gene-CLI86_10590;Dbxref=NCBI_GP:PDP43035.1;Name=PDP43035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866993.1;locus_tag=CLI86_10590;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP43035.1;transl_table=11 NSLJ01000030.1 Genbank gene 41795 41901 . + . ID=gene-CLI86_10595;Name=CLI86_10595;end_range=41901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10595;partial=true NSLJ01000030.1 Protein Homology CDS 41795 41901 . + 0 ID=cds-PDP43041.1;Parent=gene-CLI86_10595;Dbxref=NCBI_GP:PDP43041.1;Name=PDP43041.1;end_range=41901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224670.1;locus_tag=CLI86_10595;partial=true;product=IS1595 family transposase;protein_id=PDP43041.1;transl_table=11 ##sequence-region NSLJ01000031.1 1 39197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000031.1 Genbank region 1 39197 . + . ID=NSLJ01000031.1:1..39197;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000031.1 Genbank gene 355 1752 . + . ID=gene-CLI86_10600;Name=CLI86_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10600 NSLJ01000031.1 Protein Homology CDS 355 1752 . + 0 ID=cds-PDP42976.1;Parent=gene-CLI86_10600;Dbxref=NCBI_GP:PDP42976.1;Name=PDP42976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857699.1;locus_tag=CLI86_10600;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=PDP42976.1;transl_table=11 NSLJ01000031.1 Genbank gene 1756 2178 . + . ID=gene-CLI86_10605;Name=CLI86_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10605 NSLJ01000031.1 Protein Homology CDS 1756 2178 . + 0 ID=cds-PDP42977.1;Parent=gene-CLI86_10605;Dbxref=NCBI_GP:PDP42977.1;Name=PDP42977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654996.1;locus_tag=CLI86_10605;product=Holliday junction resolvase RuvX;protein_id=PDP42977.1;transl_table=11 NSLJ01000031.1 Genbank gene 2190 2747 . + . ID=gene-CLI86_10610;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CLI86_10610 NSLJ01000031.1 Protein Homology CDS 2190 2747 . + 0 ID=cds-PDP43001.1;Parent=gene-CLI86_10610;Dbxref=NCBI_GP:PDP43001.1;Name=PDP43001.1;gbkey=CDS;gene=def;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857695.1;locus_tag=CLI86_10610;product=peptide deformylase;protein_id=PDP43001.1;transl_table=11 NSLJ01000031.1 Genbank gene 2752 4839 . + . ID=gene-CLI86_10615;Name=CLI86_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10615 NSLJ01000031.1 Protein Homology CDS 2752 4839 . + 0 ID=cds-PDP42978.1;Parent=gene-CLI86_10615;Dbxref=NCBI_GP:PDP42978.1;Name=PDP42978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226152.1;locus_tag=CLI86_10615;product=hypothetical protein;protein_id=PDP42978.1;transl_table=11 NSLJ01000031.1 Genbank gene 4876 8934 . - . ID=gene-CLI86_10620;Name=CLI86_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10620 NSLJ01000031.1 Protein Homology CDS 4876 8934 . - 0 ID=cds-PDP42979.1;Parent=gene-CLI86_10620;Dbxref=NCBI_GP:PDP42979.1;Name=PDP42979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00072.22%2CHMM:PF07494.9%2CHMM:PF12833.5;locus_tag=CLI86_10620;product=hybrid sensor histidine kinase/response regulator;protein_id=PDP42979.1;transl_table=11 NSLJ01000031.1 Genbank gene 9020 12358 . - . ID=gene-CLI86_10625;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CLI86_10625 NSLJ01000031.1 Protein Homology CDS 9020 12358 . - 0 ID=cds-PDP42980.1;Parent=gene-CLI86_10625;Dbxref=NCBI_GP:PDP42980.1;Name=PDP42980.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855607.1;locus_tag=CLI86_10625;product=preprotein translocase subunit SecA;protein_id=PDP42980.1;transl_table=11 NSLJ01000031.1 Genbank gene 12425 14011 . - . ID=gene-CLI86_10630;Name=CLI86_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10630 NSLJ01000031.1 Protein Homology CDS 12425 14011 . - 0 ID=cds-PDP42981.1;Parent=gene-CLI86_10630;Dbxref=NCBI_GP:PDP42981.1;Name=PDP42981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226149.1;locus_tag=CLI86_10630;product=alkaline phosphatase family protein;protein_id=PDP42981.1;transl_table=11 NSLJ01000031.1 Genbank gene 14008 15264 . - . ID=gene-CLI86_10635;Name=CLI86_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10635 NSLJ01000031.1 Protein Homology CDS 14008 15264 . - 0 ID=cds-PDP43002.1;Parent=gene-CLI86_10635;Dbxref=NCBI_GP:PDP43002.1;Name=PDP43002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226148.1;locus_tag=CLI86_10635;product=hypothetical protein;protein_id=PDP43002.1;transl_table=11 NSLJ01000031.1 Genbank gene 15645 16883 . + . ID=gene-CLI86_10640;Name=CLI86_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10640 NSLJ01000031.1 Protein Homology CDS 15645 16883 . + 0 ID=cds-PDP42982.1;Parent=gene-CLI86_10640;Dbxref=NCBI_GP:PDP42982.1;Name=PDP42982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865814.1;locus_tag=CLI86_10640;product=hypothetical protein;protein_id=PDP42982.1;transl_table=11 NSLJ01000031.1 Genbank gene 16932 18299 . + . ID=gene-CLI86_10645;Name=CLI86_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10645 NSLJ01000031.1 Protein Homology CDS 16932 18299 . + 0 ID=cds-PDP42983.1;Parent=gene-CLI86_10645;Dbxref=NCBI_GP:PDP42983.1;Name=PDP42983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861558.1;locus_tag=CLI86_10645;product=hypothetical protein;protein_id=PDP42983.1;transl_table=11 NSLJ01000031.1 Genbank gene 18309 18935 . + . ID=gene-CLI86_10650;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CLI86_10650 NSLJ01000031.1 Protein Homology CDS 18309 18935 . + 0 ID=cds-PDP42984.1;Parent=gene-CLI86_10650;Dbxref=NCBI_GP:PDP42984.1;Name=PDP42984.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226145.1;locus_tag=CLI86_10650;product=LPS export ABC transporter periplasmic protein LptC;protein_id=PDP42984.1;transl_table=11 NSLJ01000031.1 Genbank gene 19036 21210 . + . ID=gene-CLI86_10655;Name=CLI86_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10655 NSLJ01000031.1 Protein Homology CDS 19036 21210 . + 0 ID=cds-PDP42985.1;Parent=gene-CLI86_10655;Dbxref=NCBI_GP:PDP42985.1;Name=PDP42985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226144.1;locus_tag=CLI86_10655;product=peptidylprolyl isomerase;protein_id=PDP42985.1;transl_table=11 NSLJ01000031.1 Genbank gene 21342 22388 . + . ID=gene-CLI86_10660;Name=CLI86_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10660 NSLJ01000031.1 Protein Homology CDS 21342 22388 . + 0 ID=cds-PDP42986.1;Parent=gene-CLI86_10660;Dbxref=NCBI_GP:PDP42986.1;Name=PDP42986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226143.1;locus_tag=CLI86_10660;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=PDP42986.1;transl_table=11 NSLJ01000031.1 Genbank gene 22468 23538 . + . ID=gene-CLI86_10665;Name=CLI86_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10665 NSLJ01000031.1 Protein Homology CDS 22468 23538 . + 0 ID=cds-PDP42987.1;Parent=gene-CLI86_10665;Dbxref=NCBI_GP:PDP42987.1;Name=PDP42987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226142.1;locus_tag=CLI86_10665;product=DUF4837 domain-containing protein;protein_id=PDP42987.1;transl_table=11 NSLJ01000031.1 Genbank gene 23531 24631 . + . ID=gene-CLI86_10670;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CLI86_10670 NSLJ01000031.1 Protein Homology CDS 23531 24631 . + 0 ID=cds-PDP42988.1;Parent=gene-CLI86_10670;Dbxref=NCBI_GP:PDP42988.1;Name=PDP42988.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226141.1;locus_tag=CLI86_10670;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=PDP42988.1;transl_table=11 NSLJ01000031.1 Genbank gene 24999 25520 . + . ID=gene-CLI86_10675;Name=CLI86_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10675 NSLJ01000031.1 Protein Homology CDS 24999 25520 . + 0 ID=cds-PDP42989.1;Parent=gene-CLI86_10675;Dbxref=NCBI_GP:PDP42989.1;Name=PDP42989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226139.1;locus_tag=CLI86_10675;product=glycerol-3-phosphate cytidylyltransferase;protein_id=PDP42989.1;transl_table=11 NSLJ01000031.1 Genbank gene 25523 26251 . + . ID=gene-CLI86_10680;Name=CLI86_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10680 NSLJ01000031.1 Protein Homology CDS 25523 26251 . + 0 ID=cds-PDP42990.1;Parent=gene-CLI86_10680;Dbxref=NCBI_GP:PDP42990.1;Name=PDP42990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865829.1;locus_tag=CLI86_10680;product=NAD(P)-dependent oxidoreductase;protein_id=PDP42990.1;transl_table=11 NSLJ01000031.1 Genbank gene 26255 27166 . + . ID=gene-CLI86_10685;Name=CLI86_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10685 NSLJ01000031.1 Protein Homology CDS 26255 27166 . + 0 ID=cds-PDP42991.1;Parent=gene-CLI86_10685;Dbxref=NCBI_GP:PDP42991.1;Name=PDP42991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226137.1;locus_tag=CLI86_10685;product=CDP-alcohol phosphatidyltransferase;protein_id=PDP42991.1;transl_table=11 NSLJ01000031.1 Genbank gene 27163 27990 . + . ID=gene-CLI86_10690;Name=CLI86_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10690 NSLJ01000031.1 Protein Homology CDS 27163 27990 . + 0 ID=cds-PDP42992.1;Parent=gene-CLI86_10690;Dbxref=NCBI_GP:PDP42992.1;Name=PDP42992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226136.1;locus_tag=CLI86_10690;product=hemolysin;protein_id=PDP42992.1;transl_table=11 NSLJ01000031.1 Genbank gene 28104 29285 . + . ID=gene-CLI86_10695;Name=CLI86_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10695 NSLJ01000031.1 Protein Homology CDS 28104 29285 . + 0 ID=cds-PDP42993.1;Parent=gene-CLI86_10695;Dbxref=NCBI_GP:PDP42993.1;Name=PDP42993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646534.1;locus_tag=CLI86_10695;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP42993.1;transl_table=11 NSLJ01000031.1 Genbank gene 29272 29808 . + . ID=gene-CLI86_10700;Name=CLI86_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10700 NSLJ01000031.1 Protein Homology CDS 29272 29808 . + 0 ID=cds-PDP42994.1;Parent=gene-CLI86_10700;Dbxref=NCBI_GP:PDP42994.1;Name=PDP42994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226134.1;locus_tag=CLI86_10700;product=hypothetical protein;protein_id=PDP42994.1;transl_table=11 NSLJ01000031.1 Genbank gene 29812 30576 . + . ID=gene-CLI86_10705;Name=CLI86_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10705 NSLJ01000031.1 GeneMarkS+ CDS 29812 30576 . + 0 ID=cds-PDP42995.1;Parent=gene-CLI86_10705;Dbxref=NCBI_GP:PDP42995.1;Name=PDP42995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10705;product=hypothetical protein;protein_id=PDP42995.1;transl_table=11 NSLJ01000031.1 Genbank gene 30576 30944 . + . ID=gene-CLI86_10710;Name=CLI86_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10710 NSLJ01000031.1 Protein Homology CDS 30576 30944 . + 0 ID=cds-PDP42996.1;Parent=gene-CLI86_10710;Dbxref=NCBI_GP:PDP42996.1;Name=PDP42996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861586.1;locus_tag=CLI86_10710;product=preprotein translocase subunit SecG;protein_id=PDP42996.1;transl_table=11 NSLJ01000031.1 Genbank gene 31109 31765 . + . ID=gene-CLI86_10715;Name=CLI86_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10715 NSLJ01000031.1 Protein Homology CDS 31109 31765 . + 0 ID=cds-PDP42997.1;Parent=gene-CLI86_10715;Dbxref=NCBI_GP:PDP42997.1;Name=PDP42997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226131.1;locus_tag=CLI86_10715;product=hypothetical protein;protein_id=PDP42997.1;transl_table=11 NSLJ01000031.1 Genbank gene 31904 33424 . + . ID=gene-CLI86_10720;Name=CLI86_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10720 NSLJ01000031.1 Protein Homology CDS 31904 33424 . + 0 ID=cds-PDP42998.1;Parent=gene-CLI86_10720;Dbxref=NCBI_GP:PDP42998.1;Name=PDP42998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00884.21;locus_tag=CLI86_10720;product=hypothetical protein;protein_id=PDP42998.1;transl_table=11 NSLJ01000031.1 Genbank gene 33584 33958 . + . ID=gene-CLI86_10725;Name=CLI86_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10725 NSLJ01000031.1 GeneMarkS+ CDS 33584 33958 . + 0 ID=cds-PDP42999.1;Parent=gene-CLI86_10725;Dbxref=NCBI_GP:PDP42999.1;Name=PDP42999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10725;product=hypothetical protein;protein_id=PDP42999.1;transl_table=11 NSLJ01000031.1 Genbank pseudogene 35207 38095 . - . ID=gene-CLI86_10730;Name=CLI86_10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_10730;pseudo=true NSLJ01000031.1 Protein Homology CDS 35207 38095 . - 0 ID=cds-CLI86_10730;Parent=gene-CLI86_10730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226122.1;locus_tag=CLI86_10730;product=TonB-dependent receptor;pseudo=true;transl_table=11 NSLJ01000031.1 Genbank gene 38309 38385 . - . ID=gene-CLI86_10735;Name=CLI86_10735;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_10735 NSLJ01000031.1 tRNAscan-SE tRNA 38309 38385 . - . ID=rna-CLI86_10735;Parent=gene-CLI86_10735;anticodon=(pos:complement(38349..38351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10735;product=tRNA-Asn NSLJ01000031.1 tRNAscan-SE exon 38309 38385 . - . ID=exon-CLI86_10735-1;Parent=rna-CLI86_10735;anticodon=(pos:complement(38349..38351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_10735;product=tRNA-Asn NSLJ01000031.1 Genbank gene 38467 39149 . - . ID=gene-CLI86_10740;Name=CLI86_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10740 NSLJ01000031.1 Protein Homology CDS 38822 39149 . - 0 ID=cds-PDP43000.1;Parent=gene-CLI86_10740;Dbxref=NCBI_GP:PDP43000.1;Name=PDP43000.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_10740;product=IS1 family transposase;protein_id=PDP43000.1;transl_table=11 NSLJ01000031.1 Protein Homology CDS 38467 38822 . - 2 ID=cds-PDP43000.1;Parent=gene-CLI86_10740;Dbxref=NCBI_GP:PDP43000.1;Name=PDP43000.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_10740;product=IS1 family transposase;protein_id=PDP43000.1;transl_table=11 ##sequence-region NSLJ01000032.1 1 37095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000032.1 Genbank region 1 37095 . + . ID=NSLJ01000032.1:1..37095;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000032.1 Genbank gene 64 1410 . - . ID=gene-CLI86_10745;Name=CLI86_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10745 NSLJ01000032.1 Protein Homology CDS 64 1410 . - 0 ID=cds-PDP42941.1;Parent=gene-CLI86_10745;Dbxref=NCBI_GP:PDP42941.1;Name=PDP42941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226422.1;locus_tag=CLI86_10745;product=glucose-6-phosphate isomerase;protein_id=PDP42941.1;transl_table=11 NSLJ01000032.1 Genbank gene 1452 2450 . - . ID=gene-CLI86_10750;Name=CLI86_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10750 NSLJ01000032.1 Protein Homology CDS 1452 2450 . - 0 ID=cds-PDP42942.1;Parent=gene-CLI86_10750;Dbxref=NCBI_GP:PDP42942.1;Name=PDP42942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226421.1;locus_tag=CLI86_10750;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=PDP42942.1;transl_table=11 NSLJ01000032.1 Genbank gene 2482 4218 . - . ID=gene-CLI86_10755;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CLI86_10755 NSLJ01000032.1 Protein Homology CDS 2482 4218 . - 0 ID=cds-PDP42943.1;Parent=gene-CLI86_10755;Dbxref=NCBI_GP:PDP42943.1;Name=PDP42943.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101086.1;locus_tag=CLI86_10755;product=lysine--tRNA ligase;protein_id=PDP42943.1;transl_table=11 NSLJ01000032.1 Genbank gene 4369 5814 . - . ID=gene-CLI86_10760;Name=CLI86_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10760 NSLJ01000032.1 Protein Homology CDS 4369 5814 . - 0 ID=cds-PDP42944.1;Parent=gene-CLI86_10760;Dbxref=NCBI_GP:PDP42944.1;Name=PDP42944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226419.1;locus_tag=CLI86_10760;product=rod shape-determining protein RodA;protein_id=PDP42944.1;transl_table=11 NSLJ01000032.1 Genbank gene 5804 7666 . - . ID=gene-CLI86_10765;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CLI86_10765 NSLJ01000032.1 Protein Homology CDS 5804 7666 . - 0 ID=cds-PDP42945.1;Parent=gene-CLI86_10765;Dbxref=NCBI_GP:PDP42945.1;Name=PDP42945.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226418.1;locus_tag=CLI86_10765;product=penicillin-binding protein 2;protein_id=PDP42945.1;transl_table=11 NSLJ01000032.1 Genbank gene 7653 8171 . - . ID=gene-CLI86_10770;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CLI86_10770 NSLJ01000032.1 Protein Homology CDS 7653 8171 . - 0 ID=cds-PDP42946.1;Parent=gene-CLI86_10770;Dbxref=NCBI_GP:PDP42946.1;Name=PDP42946.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226417.1;locus_tag=CLI86_10770;product=rod shape-determining protein MreD;protein_id=PDP42946.1;transl_table=11 NSLJ01000032.1 Genbank gene 8164 9015 . - . ID=gene-CLI86_10775;Name=CLI86_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10775 NSLJ01000032.1 Protein Homology CDS 8164 9015 . - 0 ID=cds-PDP42947.1;Parent=gene-CLI86_10775;Dbxref=NCBI_GP:PDP42947.1;Name=PDP42947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773377.1;locus_tag=CLI86_10775;product=rod shape-determining protein MreC;protein_id=PDP42947.1;transl_table=11 NSLJ01000032.1 Genbank gene 9088 10107 . - . ID=gene-CLI86_10780;Name=CLI86_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10780 NSLJ01000032.1 Protein Homology CDS 9088 10107 . - 0 ID=cds-PDP42948.1;Parent=gene-CLI86_10780;Dbxref=NCBI_GP:PDP42948.1;Name=PDP42948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101376.1;locus_tag=CLI86_10780;product=rod shape-determining protein;protein_id=PDP42948.1;transl_table=11 NSLJ01000032.1 Genbank gene 10145 11668 . - . ID=gene-CLI86_10785;Name=CLI86_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10785 NSLJ01000032.1 Protein Homology CDS 10145 11668 . - 0 ID=cds-PDP42949.1;Parent=gene-CLI86_10785;Dbxref=NCBI_GP:PDP42949.1;Name=PDP42949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640988.1;locus_tag=CLI86_10785;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=PDP42949.1;transl_table=11 NSLJ01000032.1 Genbank gene 11917 13602 . + . ID=gene-CLI86_10790;Name=CLI86_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10790 NSLJ01000032.1 Protein Homology CDS 11917 13602 . + 0 ID=cds-PDP42950.1;Parent=gene-CLI86_10790;Dbxref=NCBI_GP:PDP42950.1;Name=PDP42950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226412.1;locus_tag=CLI86_10790;product=energy-dependent translational throttle protein EttA;protein_id=PDP42950.1;transl_table=11 NSLJ01000032.1 Genbank gene 13642 14286 . + . ID=gene-CLI86_10795;Name=CLI86_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10795 NSLJ01000032.1 Protein Homology CDS 13642 14286 . + 0 ID=cds-PDP42951.1;Parent=gene-CLI86_10795;Dbxref=NCBI_GP:PDP42951.1;Name=PDP42951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005639429.1;locus_tag=CLI86_10795;product=DUF1080 domain-containing protein;protein_id=PDP42951.1;transl_table=11 NSLJ01000032.1 Genbank gene 14305 15840 . - . ID=gene-CLI86_10800;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CLI86_10800 NSLJ01000032.1 Protein Homology CDS 14305 15840 . - 0 ID=cds-PDP42952.1;Parent=gene-CLI86_10800;Dbxref=NCBI_GP:PDP42952.1;Name=PDP42952.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226410.1;locus_tag=CLI86_10800;product=replicative DNA helicase;protein_id=PDP42952.1;transl_table=11 NSLJ01000032.1 Genbank gene 15937 18363 . - . ID=gene-CLI86_10805;Name=CLI86_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10805 NSLJ01000032.1 Protein Homology CDS 15937 18363 . - 0 ID=cds-PDP42953.1;Parent=gene-CLI86_10805;Dbxref=NCBI_GP:PDP42953.1;Name=PDP42953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226409.1;locus_tag=CLI86_10805;product=penicillin-binding protein;protein_id=PDP42953.1;transl_table=11 NSLJ01000032.1 Genbank gene 18368 19219 . - . ID=gene-CLI86_10810;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CLI86_10810 NSLJ01000032.1 Protein Homology CDS 18368 19219 . - 0 ID=cds-PDP42954.1;Parent=gene-CLI86_10810;Dbxref=NCBI_GP:PDP42954.1;Name=PDP42954.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226408.1;locus_tag=CLI86_10810;product=twin-arginine translocase subunit TatC;protein_id=PDP42954.1;transl_table=11 NSLJ01000032.1 Genbank gene 19235 19432 . - . ID=gene-CLI86_10815;Name=CLI86_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10815 NSLJ01000032.1 Protein Homology CDS 19235 19432 . - 0 ID=cds-PDP42955.1;Parent=gene-CLI86_10815;Dbxref=NCBI_GP:PDP42955.1;Name=PDP42955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226407.1;locus_tag=CLI86_10815;product=twin-arginine translocase TatA/TatE family subunit;protein_id=PDP42955.1;transl_table=11 NSLJ01000032.1 Genbank gene 19563 20444 . + . ID=gene-CLI86_10820;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CLI86_10820 NSLJ01000032.1 Protein Homology CDS 19563 20444 . + 0 ID=cds-PDP42956.1;Parent=gene-CLI86_10820;Dbxref=NCBI_GP:PDP42956.1;Name=PDP42956.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799941.1;locus_tag=CLI86_10820;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=PDP42956.1;transl_table=11 NSLJ01000032.1 Genbank gene 20449 20988 . + . ID=gene-CLI86_10825;Name=CLI86_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10825 NSLJ01000032.1 Protein Homology CDS 20449 20988 . + 0 ID=cds-PDP42957.1;Parent=gene-CLI86_10825;Dbxref=NCBI_GP:PDP42957.1;Name=PDP42957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226405.1;locus_tag=CLI86_10825;product=DUF5063 domain-containing protein;protein_id=PDP42957.1;transl_table=11 NSLJ01000032.1 Genbank gene 20985 21581 . + . ID=gene-CLI86_10830;Name=CLI86_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10830 NSLJ01000032.1 Protein Homology CDS 20985 21581 . + 0 ID=cds-PDP42958.1;Parent=gene-CLI86_10830;Dbxref=NCBI_GP:PDP42958.1;Name=PDP42958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226404.1;locus_tag=CLI86_10830;product=3'-5' exonuclease domain-containing protein 2;protein_id=PDP42958.1;transl_table=11 NSLJ01000032.1 Genbank gene 21578 22768 . + . ID=gene-CLI86_10835;Name=CLI86_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10835 NSLJ01000032.1 Protein Homology CDS 21578 22768 . + 0 ID=cds-PDP42959.1;Parent=gene-CLI86_10835;Dbxref=NCBI_GP:PDP42959.1;Name=PDP42959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150919.1;locus_tag=CLI86_10835;product=RlmI/RlmK family 23S rRNA methyltransferase;protein_id=PDP42959.1;transl_table=11 NSLJ01000032.1 Genbank gene 22758 23336 . + . ID=gene-CLI86_10840;Name=CLI86_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10840 NSLJ01000032.1 Protein Homology CDS 22758 23336 . + 0 ID=cds-PDP42960.1;Parent=gene-CLI86_10840;Dbxref=NCBI_GP:PDP42960.1;Name=PDP42960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226402.1;locus_tag=CLI86_10840;product=sugar O-acetyltransferase;protein_id=PDP42960.1;transl_table=11 NSLJ01000032.1 Genbank gene 23758 24006 . + . ID=gene-CLI86_10845;Name=CLI86_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10845 NSLJ01000032.1 GeneMarkS+ CDS 23758 24006 . + 0 ID=cds-PDP42961.1;Parent=gene-CLI86_10845;Dbxref=NCBI_GP:PDP42961.1;Name=PDP42961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10845;product=hypothetical protein;protein_id=PDP42961.1;transl_table=11 NSLJ01000032.1 Genbank gene 24203 25789 . - . ID=gene-CLI86_10850;Name=CLI86_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10850 NSLJ01000032.1 Protein Homology CDS 24203 25789 . - 0 ID=cds-PDP42962.1;Parent=gene-CLI86_10850;Dbxref=NCBI_GP:PDP42962.1;Name=PDP42962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226399.1;locus_tag=CLI86_10850;product=FAD-binding protein;protein_id=PDP42962.1;transl_table=11 NSLJ01000032.1 Genbank gene 25875 27014 . - . ID=gene-CLI86_10855;Name=CLI86_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10855 NSLJ01000032.1 GeneMarkS+ CDS 25875 27014 . - 0 ID=cds-PDP42963.1;Parent=gene-CLI86_10855;Dbxref=NCBI_GP:PDP42963.1;Name=PDP42963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10855;product=hypothetical protein;protein_id=PDP42963.1;transl_table=11 NSLJ01000032.1 Genbank gene 27310 27654 . - . ID=gene-CLI86_10860;Name=CLI86_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10860 NSLJ01000032.1 Protein Homology CDS 27310 27654 . - 0 ID=cds-PDP42964.1;Parent=gene-CLI86_10860;Dbxref=NCBI_GP:PDP42964.1;Name=PDP42964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226396.1;locus_tag=CLI86_10860;product=DUF86 domain-containing protein;protein_id=PDP42964.1;transl_table=11 NSLJ01000032.1 Genbank gene 27638 27934 . - . ID=gene-CLI86_10865;Name=CLI86_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10865 NSLJ01000032.1 Protein Homology CDS 27638 27934 . - 0 ID=cds-PDP42965.1;Parent=gene-CLI86_10865;Dbxref=NCBI_GP:PDP42965.1;Name=PDP42965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859362.1;locus_tag=CLI86_10865;product=nucleotidyltransferase;protein_id=PDP42965.1;transl_table=11 NSLJ01000032.1 Genbank gene 28000 29370 . - . ID=gene-CLI86_10870;Name=CLI86_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10870 NSLJ01000032.1 Protein Homology CDS 28000 29370 . - 0 ID=cds-PDP42966.1;Parent=gene-CLI86_10870;Dbxref=NCBI_GP:PDP42966.1;Name=PDP42966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866174.1;locus_tag=CLI86_10870;product=DNA repair protein RadA;protein_id=PDP42966.1;transl_table=11 NSLJ01000032.1 Genbank gene 29564 30559 . - . ID=gene-CLI86_10875;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=CLI86_10875 NSLJ01000032.1 Protein Homology CDS 29564 30559 . - 0 ID=cds-PDP42967.1;Parent=gene-CLI86_10875;Dbxref=NCBI_GP:PDP42967.1;Name=PDP42967.1;gbkey=CDS;gene=fba;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013547273.1;locus_tag=CLI86_10875;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=PDP42967.1;transl_table=11 NSLJ01000032.1 Genbank gene 30783 31037 . + . ID=gene-CLI86_10880;Name=CLI86_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10880 NSLJ01000032.1 Protein Homology CDS 30783 31037 . + 0 ID=cds-PDP42968.1;Parent=gene-CLI86_10880;Dbxref=NCBI_GP:PDP42968.1;Name=PDP42968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150452.1;locus_tag=CLI86_10880;product=type B 50S ribosomal protein L31;protein_id=PDP42968.1;transl_table=11 NSLJ01000032.1 Genbank gene 31116 32204 . + . ID=gene-CLI86_10885;Name=CLI86_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10885 NSLJ01000032.1 Protein Homology CDS 31116 32204 . + 0 ID=cds-PDP42969.1;Parent=gene-CLI86_10885;Dbxref=NCBI_GP:PDP42969.1;Name=PDP42969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226391.1;locus_tag=CLI86_10885;product=aminoglycoside phosphotransferase;protein_id=PDP42969.1;transl_table=11 NSLJ01000032.1 Genbank gene 32506 33069 . + . ID=gene-CLI86_10890;Name=CLI86_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10890 NSLJ01000032.1 Protein Homology CDS 32506 33069 . + 0 ID=cds-PDP42970.1;Parent=gene-CLI86_10890;Dbxref=NCBI_GP:PDP42970.1;Name=PDP42970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226390.1;locus_tag=CLI86_10890;product=NAD(P)H nitroreductase;protein_id=PDP42970.1;transl_table=11 NSLJ01000032.1 Genbank gene 33066 33830 . + . ID=gene-CLI86_10895;Name=CLI86_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10895 NSLJ01000032.1 Protein Homology CDS 33066 33830 . + 0 ID=cds-PDP42971.1;Parent=gene-CLI86_10895;Dbxref=NCBI_GP:PDP42971.1;Name=PDP42971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800117.1;locus_tag=CLI86_10895;product=NADP oxidoreductase;protein_id=PDP42971.1;transl_table=11 NSLJ01000032.1 Genbank gene 33836 34351 . + . ID=gene-CLI86_10900;Name=CLI86_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10900 NSLJ01000032.1 Protein Homology CDS 33836 34351 . + 0 ID=cds-PDP42972.1;Parent=gene-CLI86_10900;Dbxref=NCBI_GP:PDP42972.1;Name=PDP42972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226388.1;locus_tag=CLI86_10900;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=PDP42972.1;transl_table=11 NSLJ01000032.1 Genbank gene 34418 36874 . + . ID=gene-CLI86_10905;Name=CLI86_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10905 NSLJ01000032.1 Protein Homology CDS 34418 36874 . + 0 ID=cds-PDP42973.1;Parent=gene-CLI86_10905;Dbxref=NCBI_GP:PDP42973.1;Name=PDP42973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965914.1;locus_tag=CLI86_10905;product=TonB-dependent receptor;protein_id=PDP42973.1;transl_table=11 ##sequence-region NSLJ01000033.1 1 35907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000033.1 Genbank region 1 35907 . + . ID=NSLJ01000033.1:1..35907;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000033.1 Genbank pseudogene 283 474 . + . ID=gene-CLI86_10910;Name=CLI86_10910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_10910;pseudo=true NSLJ01000033.1 Protein Homology CDS 283 474 . + 0 ID=cds-CLI86_10910;Parent=gene-CLI86_10910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004303872.1;locus_tag=CLI86_10910;product=IS110 family transposase;pseudo=true;transl_table=11 NSLJ01000033.1 Genbank gene 537 1592 . - . ID=gene-CLI86_10915;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CLI86_10915 NSLJ01000033.1 Protein Homology CDS 537 1592 . - 0 ID=cds-PDP42914.1;Parent=gene-CLI86_10915;Dbxref=NCBI_GP:PDP42914.1;Name=PDP42914.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224193.1;locus_tag=CLI86_10915;product=3-dehydroquinate synthase;protein_id=PDP42914.1;transl_table=11 NSLJ01000033.1 Genbank gene 1596 4226 . - . ID=gene-CLI86_10920;Name=CLI86_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10920 NSLJ01000033.1 Protein Homology CDS 1596 4226 . - 0 ID=cds-PDP42915.1;Parent=gene-CLI86_10920;Dbxref=NCBI_GP:PDP42915.1;Name=PDP42915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156655.1;locus_tag=CLI86_10920;product=alanine--tRNA ligase;protein_id=PDP42915.1;transl_table=11 NSLJ01000033.1 Genbank gene 4325 5308 . + . ID=gene-CLI86_10925;Name=CLI86_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10925 NSLJ01000033.1 Protein Homology CDS 4325 5308 . + 0 ID=cds-PDP42916.1;Parent=gene-CLI86_10925;Dbxref=NCBI_GP:PDP42916.1;Name=PDP42916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866895.1;locus_tag=CLI86_10925;product=M23 family peptidase;protein_id=PDP42916.1;transl_table=11 NSLJ01000033.1 Genbank gene 5316 5678 . + . ID=gene-CLI86_10930;Name=CLI86_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10930 NSLJ01000033.1 Protein Homology CDS 5316 5678 . + 0 ID=cds-PDP42917.1;Parent=gene-CLI86_10930;Dbxref=NCBI_GP:PDP42917.1;Name=PDP42917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224190.1;locus_tag=CLI86_10930;product=transcriptional regulator;protein_id=PDP42917.1;transl_table=11 NSLJ01000033.1 Genbank gene 5683 6681 . + . ID=gene-CLI86_10935;Name=CLI86_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10935 NSLJ01000033.1 Protein Homology CDS 5683 6681 . + 0 ID=cds-PDP42918.1;Parent=gene-CLI86_10935;Dbxref=NCBI_GP:PDP42918.1;Name=PDP42918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224189.1;locus_tag=CLI86_10935;product=sodium:proton exchanger;protein_id=PDP42918.1;transl_table=11 NSLJ01000033.1 Genbank gene 7662 9917 . - . ID=gene-CLI86_10940;Name=CLI86_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10940 NSLJ01000033.1 Protein Homology CDS 7662 9917 . - 0 ID=cds-PDP42919.1;Parent=gene-CLI86_10940;Dbxref=NCBI_GP:PDP42919.1;Name=PDP42919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224185.1;locus_tag=CLI86_10940;product=GTP pyrophosphokinase;protein_id=PDP42919.1;transl_table=11 NSLJ01000033.1 Genbank gene 9931 11526 . - . ID=gene-CLI86_10945;Name=CLI86_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10945 NSLJ01000033.1 Protein Homology CDS 9931 11526 . - 0 ID=cds-PDP42920.1;Parent=gene-CLI86_10945;Dbxref=NCBI_GP:PDP42920.1;Name=PDP42920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861261.1;locus_tag=CLI86_10945;product=lytic transglycosylase;protein_id=PDP42920.1;transl_table=11 NSLJ01000033.1 Genbank gene 11531 12208 . - . ID=gene-CLI86_10950;Name=CLI86_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10950 NSLJ01000033.1 GeneMarkS+ CDS 11531 12208 . - 0 ID=cds-PDP42921.1;Parent=gene-CLI86_10950;Dbxref=NCBI_GP:PDP42921.1;Name=PDP42921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10950;product=hypothetical protein;protein_id=PDP42921.1;transl_table=11 NSLJ01000033.1 Genbank gene 12250 13152 . - . ID=gene-CLI86_10955;Name=CLI86_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10955 NSLJ01000033.1 Protein Homology CDS 12250 13152 . - 0 ID=cds-PDP42922.1;Parent=gene-CLI86_10955;Dbxref=NCBI_GP:PDP42922.1;Name=PDP42922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224182.1;locus_tag=CLI86_10955;product=chromosome partitioning protein ParB;protein_id=PDP42922.1;transl_table=11 NSLJ01000033.1 Genbank gene 13156 13920 . - . ID=gene-CLI86_10960;Name=CLI86_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10960 NSLJ01000033.1 Protein Homology CDS 13156 13920 . - 0 ID=cds-PDP42923.1;Parent=gene-CLI86_10960;Dbxref=NCBI_GP:PDP42923.1;Name=PDP42923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859843.1;locus_tag=CLI86_10960;product=ParA family protein;protein_id=PDP42923.1;transl_table=11 NSLJ01000033.1 Genbank gene 14209 15225 . - . ID=gene-CLI86_10965;Name=CLI86_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10965 NSLJ01000033.1 Protein Homology CDS 14209 15225 . - 0 ID=cds-PDP42924.1;Parent=gene-CLI86_10965;Dbxref=NCBI_GP:PDP42924.1;Name=PDP42924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224179.1;locus_tag=CLI86_10965;product=peptidase S41;protein_id=PDP42924.1;transl_table=11 NSLJ01000033.1 Genbank gene 15229 16062 . - . ID=gene-CLI86_10970;Name=CLI86_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10970 NSLJ01000033.1 Protein Homology CDS 15229 16062 . - 0 ID=cds-PDP42925.1;Parent=gene-CLI86_10970;Dbxref=NCBI_GP:PDP42925.1;Name=PDP42925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11777.6;locus_tag=CLI86_10970;product=DUF3316 domain-containing protein;protein_id=PDP42925.1;transl_table=11 NSLJ01000033.1 Genbank gene 16083 18767 . - . ID=gene-CLI86_10975;Name=CLI86_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10975 NSLJ01000033.1 Protein Homology CDS 16083 18767 . - 0 ID=cds-PDP42937.1;Parent=gene-CLI86_10975;Dbxref=NCBI_GP:PDP42937.1;Name=PDP42937.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224177.1;locus_tag=CLI86_10975;product=DNA topoisomerase IV;protein_id=PDP42937.1;transl_table=11 NSLJ01000033.1 Genbank gene 18907 19146 . + . ID=gene-CLI86_10980;Name=CLI86_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10980 NSLJ01000033.1 Protein Homology CDS 18907 19146 . + 0 ID=cds-PDP42926.1;Parent=gene-CLI86_10980;Dbxref=NCBI_GP:PDP42926.1;Name=PDP42926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224176.1;locus_tag=CLI86_10980;product=transposase;protein_id=PDP42926.1;transl_table=11 NSLJ01000033.1 Genbank gene 19322 20119 . + . ID=gene-CLI86_10985;Name=CLI86_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10985 NSLJ01000033.1 Protein Homology CDS 19322 20119 . + 0 ID=cds-PDP42927.1;Parent=gene-CLI86_10985;Dbxref=NCBI_GP:PDP42927.1;Name=PDP42927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=CLI86_10985;product=hypothetical protein;protein_id=PDP42927.1;transl_table=11 NSLJ01000033.1 Genbank gene 20490 21254 . + . ID=gene-CLI86_10990;Name=CLI86_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10990 NSLJ01000033.1 GeneMarkS+ CDS 20490 21254 . + 0 ID=cds-PDP42928.1;Parent=gene-CLI86_10990;Dbxref=NCBI_GP:PDP42928.1;Name=PDP42928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_10990;product=hypothetical protein;protein_id=PDP42928.1;transl_table=11 NSLJ01000033.1 Genbank gene 21266 23284 . + . ID=gene-CLI86_10995;Name=CLI86_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_10995 NSLJ01000033.1 Protein Homology CDS 21266 23284 . + 0 ID=cds-PDP42929.1;Parent=gene-CLI86_10995;Dbxref=NCBI_GP:PDP42929.1;Name=PDP42929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07715.13;locus_tag=CLI86_10995;product=hypothetical protein;protein_id=PDP42929.1;transl_table=11 NSLJ01000033.1 Genbank gene 23369 24421 . + . ID=gene-CLI86_11000;Name=CLI86_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11000 NSLJ01000033.1 Protein Homology CDS 23369 24421 . + 0 ID=cds-PDP42930.1;Parent=gene-CLI86_11000;Dbxref=NCBI_GP:PDP42930.1;Name=PDP42930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02624.14;locus_tag=CLI86_11000;product=hypothetical protein;protein_id=PDP42930.1;transl_table=11 NSLJ01000033.1 Genbank gene 24425 24790 . + . ID=gene-CLI86_11005;Name=CLI86_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11005 NSLJ01000033.1 GeneMarkS+ CDS 24425 24790 . + 0 ID=cds-PDP42931.1;Parent=gene-CLI86_11005;Dbxref=NCBI_GP:PDP42931.1;Name=PDP42931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11005;product=hypothetical protein;protein_id=PDP42931.1;transl_table=11 NSLJ01000033.1 Genbank gene 24771 25376 . + . ID=gene-CLI86_11010;Name=CLI86_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11010 NSLJ01000033.1 Protein Homology CDS 24771 25376 . + 0 ID=cds-PDP42932.1;Parent=gene-CLI86_11010;Dbxref=NCBI_GP:PDP42932.1;Name=PDP42932.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12698.5;locus_tag=CLI86_11010;product=hypothetical protein;protein_id=PDP42932.1;transl_table=11 NSLJ01000033.1 Genbank pseudogene 25406 25609 . - . ID=gene-CLI86_11015;Name=CLI86_11015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11015;pseudo=true NSLJ01000033.1 Protein Homology CDS 25406 25609 . - 0 ID=cds-CLI86_11015;Parent=gene-CLI86_11015;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640472.1;locus_tag=CLI86_11015;product=transposase;pseudo=true;transl_table=11 NSLJ01000033.1 Genbank gene 25798 25871 . + . ID=gene-CLI86_11020;Name=CLI86_11020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_11020 NSLJ01000033.1 tRNAscan-SE tRNA 25798 25871 . + . ID=rna-CLI86_11020;Parent=gene-CLI86_11020;anticodon=(pos:25832..25834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11020;product=tRNA-Met NSLJ01000033.1 tRNAscan-SE exon 25798 25871 . + . ID=exon-CLI86_11020-1;Parent=rna-CLI86_11020;anticodon=(pos:25832..25834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11020;product=tRNA-Met NSLJ01000033.1 Genbank gene 25903 27450 . + . ID=gene-CLI86_11025;Name=CLI86_11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11025 NSLJ01000033.1 Protein Homology CDS 25903 27450 . + 0 ID=cds-PDP42933.1;Parent=gene-CLI86_11025;Dbxref=NCBI_GP:PDP42933.1;Name=PDP42933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224171.1;locus_tag=CLI86_11025;product=aromatic amino acid lyase;protein_id=PDP42933.1;transl_table=11 NSLJ01000033.1 Genbank pseudogene 27454 27819 . + . ID=gene-CLI86_11030;Name=CLI86_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11030;pseudo=true NSLJ01000033.1 Protein Homology CDS 27454 27819 . + 0 ID=cds-CLI86_11030;Parent=gene-CLI86_11030;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010260434.1;locus_tag=CLI86_11030;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NSLJ01000033.1 Genbank gene 27838 29157 . + . ID=gene-CLI86_11035;Name=CLI86_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11035 NSLJ01000033.1 Protein Homology CDS 27838 29157 . + 0 ID=cds-PDP42934.1;Parent=gene-CLI86_11035;Dbxref=NCBI_GP:PDP42934.1;Name=PDP42934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224169.1;locus_tag=CLI86_11035;product=phenylacetate--CoA ligase;protein_id=PDP42934.1;transl_table=11 NSLJ01000033.1 Genbank gene 29147 30271 . + . ID=gene-CLI86_11040;Name=CLI86_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11040 NSLJ01000033.1 Protein Homology CDS 29147 30271 . + 0 ID=cds-PDP42935.1;Parent=gene-CLI86_11040;Dbxref=NCBI_GP:PDP42935.1;Name=PDP42935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224168.1;locus_tag=CLI86_11040;product=acyltransferase;protein_id=PDP42935.1;transl_table=11 NSLJ01000033.1 Genbank gene 30368 33850 . + . ID=gene-CLI86_11045;Name=CLI86_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11045 NSLJ01000033.1 Protein Homology CDS 30368 33850 . + 0 ID=cds-PDP42936.1;Parent=gene-CLI86_11045;Dbxref=NCBI_GP:PDP42936.1;Name=PDP42936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224167.1;locus_tag=CLI86_11045;product=hypothetical protein;protein_id=PDP42936.1;transl_table=11 NSLJ01000033.1 Genbank gene 34211 35907 . + . ID=gene-CLI86_11050;Name=CLI86_11050;end_range=35907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11050;partial=true NSLJ01000033.1 Protein Homology CDS 34211 35907 . + 0 ID=cds-PDP42938.1;Parent=gene-CLI86_11050;Dbxref=NCBI_GP:PDP42938.1;Name=PDP42938.1;end_range=35907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224166.1;locus_tag=CLI86_11050;partial=true;product=hypothetical protein;protein_id=PDP42938.1;transl_table=11 ##sequence-region NSLJ01000034.1 1 35778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000034.1 Genbank region 1 35778 . + . ID=NSLJ01000034.1:1..35778;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000034.1 Genbank gene 1 359 . + . ID=gene-CLI86_11055;Name=CLI86_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11055;partial=true;start_range=.,1 NSLJ01000034.1 Protein Homology CDS 1 359 . + 2 ID=cds-PDP42885.1;Parent=gene-CLI86_11055;Dbxref=NCBI_GP:PDP42885.1;Name=PDP42885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225861.1;locus_tag=CLI86_11055;partial=true;product=hypothetical protein;protein_id=PDP42885.1;start_range=.,1;transl_table=11 NSLJ01000034.1 Genbank pseudogene 380 1300 . + . ID=gene-CLI86_11060;Name=CLI86_11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11060;pseudo=true NSLJ01000034.1 Protein Homology CDS 380 1300 . + 0 ID=cds-CLI86_11060;Parent=gene-CLI86_11060;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347039.1;locus_tag=CLI86_11060;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000034.1 Genbank gene 1604 2944 . + . ID=gene-CLI86_11065;Name=CLI86_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11065 NSLJ01000034.1 Protein Homology CDS 1604 2944 . + 0 ID=cds-PDP42886.1;Parent=gene-CLI86_11065;Dbxref=NCBI_GP:PDP42886.1;Name=PDP42886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225862.1;locus_tag=CLI86_11065;product=alpha-L-fucosidase;protein_id=PDP42886.1;transl_table=11 NSLJ01000034.1 Genbank gene 3032 4201 . + . ID=gene-CLI86_11070;Name=CLI86_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11070 NSLJ01000034.1 Protein Homology CDS 3032 4201 . + 0 ID=cds-PDP42887.1;Parent=gene-CLI86_11070;Dbxref=NCBI_GP:PDP42887.1;Name=PDP42887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018024.1;locus_tag=CLI86_11070;product=proline dehydrogenase;protein_id=PDP42887.1;transl_table=11 NSLJ01000034.1 Genbank gene 4203 4787 . + . ID=gene-CLI86_11075;Name=CLI86_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11075 NSLJ01000034.1 Protein Homology CDS 4203 4787 . + 0 ID=cds-PDP42888.1;Parent=gene-CLI86_11075;Dbxref=NCBI_GP:PDP42888.1;Name=PDP42888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225864.1;locus_tag=CLI86_11075;product=DNA glycosylase;protein_id=PDP42888.1;transl_table=11 NSLJ01000034.1 Genbank gene 5085 5174 . + . ID=gene-CLI86_11080;Name=CLI86_11080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_11080 NSLJ01000034.1 tRNAscan-SE tRNA 5085 5174 . + . ID=rna-CLI86_11080;Parent=gene-CLI86_11080;anticodon=(pos:5119..5121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11080;product=tRNA-Ser NSLJ01000034.1 tRNAscan-SE exon 5085 5174 . + . ID=exon-CLI86_11080-1;Parent=rna-CLI86_11080;anticodon=(pos:5119..5121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11080;product=tRNA-Ser NSLJ01000034.1 Genbank gene 5621 8629 . + . ID=gene-CLI86_11085;Name=CLI86_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11085 NSLJ01000034.1 Protein Homology CDS 5621 8629 . + 0 ID=cds-PDP42889.1;Parent=gene-CLI86_11085;Dbxref=NCBI_GP:PDP42889.1;Name=PDP42889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225867.1;locus_tag=CLI86_11085;product=TonB-dependent receptor;protein_id=PDP42889.1;transl_table=11 NSLJ01000034.1 Genbank gene 8653 10212 . + . ID=gene-CLI86_11090;Name=CLI86_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11090 NSLJ01000034.1 Protein Homology CDS 8653 10212 . + 0 ID=cds-PDP42890.1;Parent=gene-CLI86_11090;Dbxref=NCBI_GP:PDP42890.1;Name=PDP42890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867840.1;locus_tag=CLI86_11090;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP42890.1;transl_table=11 NSLJ01000034.1 Genbank gene 10294 11397 . + . ID=gene-CLI86_11095;Name=CLI86_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11095 NSLJ01000034.1 Protein Homology CDS 10294 11397 . + 0 ID=cds-PDP42891.1;Parent=gene-CLI86_11095;Dbxref=NCBI_GP:PDP42891.1;Name=PDP42891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05036.11;locus_tag=CLI86_11095;product=hypothetical protein;protein_id=PDP42891.1;transl_table=11 NSLJ01000034.1 Genbank gene 11468 13375 . + . ID=gene-CLI86_11100;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=CLI86_11100 NSLJ01000034.1 Protein Homology CDS 11468 13375 . + 0 ID=cds-PDP42892.1;Parent=gene-CLI86_11100;Dbxref=NCBI_GP:PDP42892.1;Name=PDP42892.1;gbkey=CDS;gene=mutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562496.1;locus_tag=CLI86_11100;product=methylmalonyl-CoA mutase small subunit;protein_id=PDP42892.1;transl_table=11 NSLJ01000034.1 Genbank gene 13393 15540 . + . ID=gene-CLI86_11105;Name=CLI86_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11105 NSLJ01000034.1 Protein Homology CDS 13393 15540 . + 0 ID=cds-PDP42893.1;Parent=gene-CLI86_11105;Dbxref=NCBI_GP:PDP42893.1;Name=PDP42893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006797728.1;locus_tag=CLI86_11105;product=methylmalonyl-CoA mutase;protein_id=PDP42893.1;transl_table=11 NSLJ01000034.1 Genbank gene 15760 17733 . + . ID=gene-CLI86_11110;Name=CLI86_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11110 NSLJ01000034.1 Protein Homology CDS 15760 17733 . + 0 ID=cds-PDP42894.1;Parent=gene-CLI86_11110;Dbxref=NCBI_GP:PDP42894.1;Name=PDP42894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155246.1;locus_tag=CLI86_11110;product=glycosyl transferase family 2;protein_id=PDP42894.1;transl_table=11 NSLJ01000034.1 Genbank gene 17758 17973 . - . ID=gene-CLI86_11115;Name=CLI86_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11115 NSLJ01000034.1 GeneMarkS+ CDS 17758 17973 . - 0 ID=cds-PDP42895.1;Parent=gene-CLI86_11115;Dbxref=NCBI_GP:PDP42895.1;Name=PDP42895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11115;product=hypothetical protein;protein_id=PDP42895.1;transl_table=11 NSLJ01000034.1 Genbank gene 18111 18869 . - . ID=gene-CLI86_11120;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CLI86_11120 NSLJ01000034.1 Protein Homology CDS 18111 18869 . - 0 ID=cds-PDP42896.1;Parent=gene-CLI86_11120;Dbxref=NCBI_GP:PDP42896.1;Name=PDP42896.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654016.1;locus_tag=CLI86_11120;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=PDP42896.1;transl_table=11 NSLJ01000034.1 Genbank gene 18937 20883 . - . ID=gene-CLI86_11125;Name=CLI86_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11125 NSLJ01000034.1 Protein Homology CDS 18937 20883 . - 0 ID=cds-PDP42909.1;Parent=gene-CLI86_11125;Dbxref=NCBI_GP:PDP42909.1;Name=PDP42909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225876.1;locus_tag=CLI86_11125;product=membrane protein insertase YidC;protein_id=PDP42909.1;transl_table=11 NSLJ01000034.1 Genbank gene 20926 22530 . - . ID=gene-CLI86_11130;Name=CLI86_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11130 NSLJ01000034.1 Protein Homology CDS 20926 22530 . - 0 ID=cds-PDP42897.1;Parent=gene-CLI86_11130;Dbxref=NCBI_GP:PDP42897.1;Name=PDP42897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007657611.1;locus_tag=CLI86_11130;product=CTP synthase;protein_id=PDP42897.1;transl_table=11 NSLJ01000034.1 Genbank gene 22762 24564 . - . ID=gene-CLI86_11135;Name=CLI86_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11135 NSLJ01000034.1 Protein Homology CDS 22762 24564 . - 0 ID=cds-PDP42910.1;Parent=gene-CLI86_11135;Dbxref=NCBI_GP:PDP42910.1;Name=PDP42910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965879.1;locus_tag=CLI86_11135;product=DNA mismatch repair protein MutS;protein_id=PDP42910.1;transl_table=11 NSLJ01000034.1 Genbank gene 24790 26334 . + . ID=gene-CLI86_11140;Name=CLI86_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11140 NSLJ01000034.1 Protein Homology CDS 24790 26334 . + 0 ID=cds-PDP42898.1;Parent=gene-CLI86_11140;Dbxref=NCBI_GP:PDP42898.1;Name=PDP42898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11276.6;locus_tag=CLI86_11140;product=hypothetical protein;protein_id=PDP42898.1;transl_table=11 NSLJ01000034.1 Genbank gene 26504 26950 . + . ID=gene-CLI86_11145;Name=CLI86_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11145 NSLJ01000034.1 Protein Homology CDS 26504 26950 . + 0 ID=cds-PDP42899.1;Parent=gene-CLI86_11145;Dbxref=NCBI_GP:PDP42899.1;Name=PDP42899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225881.1;locus_tag=CLI86_11145;product=Fis family transcriptional regulator;protein_id=PDP42899.1;transl_table=11 NSLJ01000034.1 Genbank gene 26950 27855 . + . ID=gene-CLI86_11150;Name=CLI86_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11150 NSLJ01000034.1 Protein Homology CDS 26950 27855 . + 0 ID=cds-PDP42900.1;Parent=gene-CLI86_11150;Dbxref=NCBI_GP:PDP42900.1;Name=PDP42900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225882.1;locus_tag=CLI86_11150;product=ferredoxin;protein_id=PDP42900.1;transl_table=11 NSLJ01000034.1 Genbank gene 27865 29193 . + . ID=gene-CLI86_11155;Name=CLI86_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11155 NSLJ01000034.1 Protein Homology CDS 27865 29193 . + 0 ID=cds-PDP42901.1;Parent=gene-CLI86_11155;Dbxref=NCBI_GP:PDP42901.1;Name=PDP42901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225883.1;locus_tag=CLI86_11155;product=electron transport complex subunit RsxC;protein_id=PDP42901.1;transl_table=11 NSLJ01000034.1 Genbank gene 29236 30192 . + . ID=gene-CLI86_11160;Name=CLI86_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11160 NSLJ01000034.1 Protein Homology CDS 29236 30192 . + 0 ID=cds-PDP42902.1;Parent=gene-CLI86_11160;Dbxref=NCBI_GP:PDP42902.1;Name=PDP42902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800186.1;locus_tag=CLI86_11160;product=Na+-transporting NADH:ubiquinone oxidoreductase subunit D;protein_id=PDP42902.1;transl_table=11 NSLJ01000034.1 Genbank gene 30195 30818 . + . ID=gene-CLI86_11165;Name=CLI86_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11165 NSLJ01000034.1 Protein Homology CDS 30195 30818 . + 0 ID=cds-PDP42903.1;Parent=gene-CLI86_11165;Dbxref=NCBI_GP:PDP42903.1;Name=PDP42903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225885.1;locus_tag=CLI86_11165;product=electron transporter RnfG;protein_id=PDP42903.1;transl_table=11 NSLJ01000034.1 Genbank gene 30851 31432 . + . ID=gene-CLI86_11170;Name=CLI86_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11170 NSLJ01000034.1 Protein Homology CDS 30851 31432 . + 0 ID=cds-PDP42904.1;Parent=gene-CLI86_11170;Dbxref=NCBI_GP:PDP42904.1;Name=PDP42904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099878.1;locus_tag=CLI86_11170;product=electron transport complex subunit RsxE;protein_id=PDP42904.1;transl_table=11 NSLJ01000034.1 Genbank gene 31450 32022 . + . ID=gene-CLI86_11175;Name=CLI86_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11175 NSLJ01000034.1 Protein Homology CDS 31450 32022 . + 0 ID=cds-PDP42905.1;Parent=gene-CLI86_11175;Dbxref=NCBI_GP:PDP42905.1;Name=PDP42905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874209.1;locus_tag=CLI86_11175;product=electron transport complex subunit RsxA;protein_id=PDP42905.1;transl_table=11 NSLJ01000034.1 Genbank gene 32050 32544 . - . ID=gene-CLI86_11180;Name=CLI86_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11180 NSLJ01000034.1 GeneMarkS+ CDS 32050 32544 . - 0 ID=cds-PDP42906.1;Parent=gene-CLI86_11180;Dbxref=NCBI_GP:PDP42906.1;Name=PDP42906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11180;product=hypothetical protein;protein_id=PDP42906.1;transl_table=11 NSLJ01000034.1 Genbank gene 32780 33079 . - . ID=gene-CLI86_11185;Name=CLI86_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11185 NSLJ01000034.1 Protein Homology CDS 32780 33079 . - 0 ID=cds-PDP42911.1;Parent=gene-CLI86_11185;Dbxref=NCBI_GP:PDP42911.1;Name=PDP42911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225890.1;locus_tag=CLI86_11185;product=hypothetical protein;protein_id=PDP42911.1;transl_table=11 NSLJ01000034.1 Genbank gene 33658 34362 . + . ID=gene-CLI86_11190;Name=CLI86_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11190 NSLJ01000034.1 Protein Homology CDS 33658 34362 . + 0 ID=cds-PDP42907.1;Parent=gene-CLI86_11190;Dbxref=NCBI_GP:PDP42907.1;Name=PDP42907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867662.1;locus_tag=CLI86_11190;product=DUF1751 domain-containing protein;protein_id=PDP42907.1;transl_table=11 NSLJ01000034.1 Genbank gene 34343 35227 . + . ID=gene-CLI86_11195;Name=CLI86_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11195 NSLJ01000034.1 Protein Homology CDS 34343 35227 . + 0 ID=cds-PDP42908.1;Parent=gene-CLI86_11195;Dbxref=NCBI_GP:PDP42908.1;Name=PDP42908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225894.1;locus_tag=CLI86_11195;product=rhomboid family intramembrane serine protease;protein_id=PDP42908.1;transl_table=11 NSLJ01000034.1 Genbank pseudogene 35230 35658 . + . ID=gene-CLI86_11200;Name=CLI86_11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11200;pseudo=true NSLJ01000034.1 Protein Homology CDS 35230 35658 . + 0 ID=cds-CLI86_11200;Parent=gene-CLI86_11200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225895.1;locus_tag=CLI86_11200;product=endonuclease;pseudo=true;transl_table=11 ##sequence-region NSLJ01000035.1 1 34541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000035.1 Genbank region 1 34541 . + . ID=NSLJ01000035.1:1..34541;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000035.1 Genbank gene 1 426 . - . ID=gene-CLI86_11205;Name=CLI86_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11205;partial=true;start_range=.,1 NSLJ01000035.1 Protein Homology CDS 1 426 . - 0 ID=cds-PDP42858.1;Parent=gene-CLI86_11205;Dbxref=NCBI_GP:PDP42858.1;Name=PDP42858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14294.4;locus_tag=CLI86_11205;partial=true;product=hypothetical protein;protein_id=PDP42858.1;start_range=.,1;transl_table=11 NSLJ01000035.1 Genbank gene 543 1388 . + . ID=gene-CLI86_11210;Name=CLI86_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11210 NSLJ01000035.1 Protein Homology CDS 543 1388 . + 0 ID=cds-PDP42881.1;Parent=gene-CLI86_11210;Dbxref=NCBI_GP:PDP42881.1;Name=PDP42881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225299.1;locus_tag=CLI86_11210;product=serine protease;protein_id=PDP42881.1;transl_table=11 NSLJ01000035.1 Genbank gene 1482 1568 . - . ID=gene-CLI86_11215;Name=CLI86_11215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_11215 NSLJ01000035.1 tRNAscan-SE tRNA 1482 1568 . - . ID=rna-CLI86_11215;Parent=gene-CLI86_11215;anticodon=(pos:complement(1532..1534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11215;product=tRNA-Leu NSLJ01000035.1 tRNAscan-SE exon 1482 1568 . - . ID=exon-CLI86_11215-1;Parent=rna-CLI86_11215;anticodon=(pos:complement(1532..1534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11215;product=tRNA-Leu NSLJ01000035.1 Genbank gene 1739 2683 . - . ID=gene-CLI86_11220;Name=CLI86_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11220 NSLJ01000035.1 Protein Homology CDS 1739 2683 . - 0 ID=cds-PDP42859.1;Parent=gene-CLI86_11220;Dbxref=NCBI_GP:PDP42859.1;Name=PDP42859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007666754.1;locus_tag=CLI86_11220;product=alpha/beta hydrolase;protein_id=PDP42859.1;transl_table=11 NSLJ01000035.1 Genbank gene 2715 3548 . - . ID=gene-CLI86_11225;Name=CLI86_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11225 NSLJ01000035.1 Protein Homology CDS 2715 3548 . - 0 ID=cds-PDP42860.1;Parent=gene-CLI86_11225;Dbxref=NCBI_GP:PDP42860.1;Name=PDP42860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003497001.1;locus_tag=CLI86_11225;product=deoxyribonuclease IV;protein_id=PDP42860.1;transl_table=11 NSLJ01000035.1 Genbank gene 3567 5543 . - . ID=gene-CLI86_11230;Name=CLI86_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11230 NSLJ01000035.1 GeneMarkS+ CDS 3567 5543 . - 0 ID=cds-PDP42861.1;Parent=gene-CLI86_11230;Dbxref=NCBI_GP:PDP42861.1;Name=PDP42861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11230;product=hypothetical protein;protein_id=PDP42861.1;transl_table=11 NSLJ01000035.1 Genbank gene 5549 6292 . - . ID=gene-CLI86_11235;Name=CLI86_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11235 NSLJ01000035.1 Protein Homology CDS 5549 6292 . - 0 ID=cds-PDP42862.1;Parent=gene-CLI86_11235;Dbxref=NCBI_GP:PDP42862.1;Name=PDP42862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225303.1;locus_tag=CLI86_11235;product=glycosyltransferase family 2 protein;protein_id=PDP42862.1;transl_table=11 NSLJ01000035.1 Genbank gene 6399 11108 . + . ID=gene-CLI86_11240;Name=CLI86_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11240 NSLJ01000035.1 Protein Homology CDS 6399 11108 . + 0 ID=cds-PDP42863.1;Parent=gene-CLI86_11240;Dbxref=NCBI_GP:PDP42863.1;Name=PDP42863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04357.11;locus_tag=CLI86_11240;product=hypothetical protein;protein_id=PDP42863.1;transl_table=11 NSLJ01000035.1 Genbank gene 11101 13410 . + . ID=gene-CLI86_11245;Name=CLI86_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11245 NSLJ01000035.1 Protein Homology CDS 11101 13410 . + 0 ID=cds-PDP42864.1;Parent=gene-CLI86_11245;Dbxref=NCBI_GP:PDP42864.1;Name=PDP42864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225306.1;locus_tag=CLI86_11245;product=hypothetical protein;protein_id=PDP42864.1;transl_table=11 NSLJ01000035.1 Genbank gene 13499 15994 . - . ID=gene-CLI86_11250;Name=CLI86_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11250 NSLJ01000035.1 Protein Homology CDS 13499 15994 . - 0 ID=cds-PDP42865.1;Parent=gene-CLI86_11250;Dbxref=NCBI_GP:PDP42865.1;Name=PDP42865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00128.22%2CHMM:PF02922.16;locus_tag=CLI86_11250;product=alpha-amylase;protein_id=PDP42865.1;transl_table=11 NSLJ01000035.1 Genbank gene 16298 17146 . + . ID=gene-CLI86_11255;Name=CLI86_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11255 NSLJ01000035.1 Protein Homology CDS 16298 17146 . + 0 ID=cds-PDP42866.1;Parent=gene-CLI86_11255;Dbxref=NCBI_GP:PDP42866.1;Name=PDP42866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07021.10;locus_tag=CLI86_11255;product=class I SAM-dependent methyltransferase;protein_id=PDP42866.1;transl_table=11 NSLJ01000035.1 Genbank gene 17149 18573 . + . ID=gene-CLI86_11260;Name=CLI86_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11260 NSLJ01000035.1 GeneMarkS+ CDS 17149 18573 . + 0 ID=cds-PDP42867.1;Parent=gene-CLI86_11260;Dbxref=NCBI_GP:PDP42867.1;Name=PDP42867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11260;product=polysaccharide biosynthesis protein;protein_id=PDP42867.1;transl_table=11 NSLJ01000035.1 Genbank gene 18566 19828 . + . ID=gene-CLI86_11265;Name=CLI86_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11265 NSLJ01000035.1 GeneMarkS+ CDS 18566 19828 . + 0 ID=cds-PDP42868.1;Parent=gene-CLI86_11265;Dbxref=NCBI_GP:PDP42868.1;Name=PDP42868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11265;product=hypothetical protein;protein_id=PDP42868.1;transl_table=11 NSLJ01000035.1 Genbank gene 19776 20633 . + . ID=gene-CLI86_11270;Name=CLI86_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11270 NSLJ01000035.1 Protein Homology CDS 19776 20633 . + 0 ID=cds-PDP42869.1;Parent=gene-CLI86_11270;Dbxref=NCBI_GP:PDP42869.1;Name=PDP42869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10111.7;locus_tag=CLI86_11270;product=glycosyltransferase family 2 protein;protein_id=PDP42869.1;transl_table=11 NSLJ01000035.1 Genbank gene 20630 21892 . + . ID=gene-CLI86_11275;Name=CLI86_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11275 NSLJ01000035.1 Protein Homology CDS 20630 21892 . + 0 ID=cds-PDP42870.1;Parent=gene-CLI86_11275;Dbxref=NCBI_GP:PDP42870.1;Name=PDP42870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658595.1;locus_tag=CLI86_11275;product=hypothetical protein;protein_id=PDP42870.1;transl_table=11 NSLJ01000035.1 Genbank gene 21914 22264 . + . ID=gene-CLI86_11280;Name=CLI86_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11280 NSLJ01000035.1 Protein Homology CDS 21914 22264 . + 0 ID=cds-PDP42871.1;Parent=gene-CLI86_11280;Dbxref=NCBI_GP:PDP42871.1;Name=PDP42871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019096965.1;locus_tag=CLI86_11280;product=hypothetical protein;protein_id=PDP42871.1;transl_table=11 NSLJ01000035.1 Genbank gene 22240 23577 . + . ID=gene-CLI86_11285;Name=CLI86_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11285 NSLJ01000035.1 Protein Homology CDS 22240 23577 . + 0 ID=cds-PDP42872.1;Parent=gene-CLI86_11285;Dbxref=NCBI_GP:PDP42872.1;Name=PDP42872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00534.18;locus_tag=CLI86_11285;product=hypothetical protein;protein_id=PDP42872.1;transl_table=11 NSLJ01000035.1 Genbank gene 23572 24705 . - . ID=gene-CLI86_11290;Name=CLI86_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11290 NSLJ01000035.1 Protein Homology CDS 23572 24705 . - 0 ID=cds-PDP42873.1;Parent=gene-CLI86_11290;Dbxref=NCBI_GP:PDP42873.1;Name=PDP42873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225313.1;locus_tag=CLI86_11290;product=glycosyl transferase;protein_id=PDP42873.1;transl_table=11 NSLJ01000035.1 Genbank gene 24722 25195 . - . ID=gene-CLI86_11295;Name=CLI86_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11295 NSLJ01000035.1 Protein Homology CDS 24722 25195 . - 0 ID=cds-PDP42874.1;Parent=gene-CLI86_11295;Dbxref=NCBI_GP:PDP42874.1;Name=PDP42874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225314.1;locus_tag=CLI86_11295;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=PDP42874.1;transl_table=11 NSLJ01000035.1 Genbank gene 25392 25763 . + . ID=gene-CLI86_11300;Name=CLI86_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11300 NSLJ01000035.1 Protein Homology CDS 25392 25763 . + 0 ID=cds-PDP42875.1;Parent=gene-CLI86_11300;Dbxref=NCBI_GP:PDP42875.1;Name=PDP42875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654516.1;locus_tag=CLI86_11300;product=DUF4783 domain-containing protein;protein_id=PDP42875.1;transl_table=11 NSLJ01000035.1 Genbank gene 25787 26635 . + . ID=gene-CLI86_11305;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CLI86_11305 NSLJ01000035.1 Protein Homology CDS 25787 26635 . + 0 ID=cds-PDP42876.1;Parent=gene-CLI86_11305;Dbxref=NCBI_GP:PDP42876.1;Name=PDP42876.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225316.1;locus_tag=CLI86_11305;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=PDP42876.1;transl_table=11 NSLJ01000035.1 Genbank gene 26660 29353 . + . ID=gene-CLI86_11310;Name=CLI86_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11310 NSLJ01000035.1 Protein Homology CDS 26660 29353 . + 0 ID=cds-PDP42877.1;Parent=gene-CLI86_11310;Dbxref=NCBI_GP:PDP42877.1;Name=PDP42877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_11310;product=hypothetical protein;protein_id=PDP42877.1;transl_table=11 NSLJ01000035.1 Genbank gene 29362 29934 . - . ID=gene-CLI86_11315;Name=CLI86_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11315 NSLJ01000035.1 Protein Homology CDS 29362 29934 . - 0 ID=cds-PDP42878.1;Parent=gene-CLI86_11315;Dbxref=NCBI_GP:PDP42878.1;Name=PDP42878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225318.1;locus_tag=CLI86_11315;product=N-acetyltransferase;protein_id=PDP42878.1;transl_table=11 NSLJ01000035.1 Genbank gene 29956 30660 . - . ID=gene-CLI86_11320;Name=CLI86_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11320 NSLJ01000035.1 Protein Homology CDS 29956 30660 . - 0 ID=cds-PDP42879.1;Parent=gene-CLI86_11320;Dbxref=NCBI_GP:PDP42879.1;Name=PDP42879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864241.1;locus_tag=CLI86_11320;product=SAM-dependent methyltransferase;protein_id=PDP42879.1;transl_table=11 NSLJ01000035.1 Genbank pseudogene 30909 31092 . + . ID=gene-CLI86_11325;Name=CLI86_11325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11325;pseudo=true NSLJ01000035.1 Protein Homology CDS 30909 31092 . + 0 ID=cds-CLI86_11325;Parent=gene-CLI86_11325;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224267.1;locus_tag=CLI86_11325;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000035.1 Genbank gene 31238 34414 . - . ID=gene-CLI86_11330;Name=CLI86_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11330 NSLJ01000035.1 Protein Homology CDS 31238 34414 . - 0 ID=cds-PDP42880.1;Parent=gene-CLI86_11330;Dbxref=NCBI_GP:PDP42880.1;Name=PDP42880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13306.4;locus_tag=CLI86_11330;product=hypothetical protein;protein_id=PDP42880.1;transl_table=11 ##sequence-region NSLJ01000036.1 1 32994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000036.1 Genbank region 1 32994 . + . ID=NSLJ01000036.1:1..32994;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000036.1 Genbank gene 1 1883 . - . ID=gene-CLI86_11335;Name=CLI86_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11335;partial=true;start_range=.,1 NSLJ01000036.1 Protein Homology CDS 1 1883 . - 0 ID=cds-PDP42851.1;Parent=gene-CLI86_11335;Dbxref=NCBI_GP:PDP42851.1;Name=PDP42851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224934.1;locus_tag=CLI86_11335;partial=true;product=hypothetical protein;protein_id=PDP42851.1;start_range=.,1;transl_table=11 NSLJ01000036.1 Genbank gene 2286 4442 . - . ID=gene-CLI86_11340;Name=CLI86_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11340 NSLJ01000036.1 Protein Homology CDS 2286 4442 . - 0 ID=cds-PDP42813.1;Parent=gene-CLI86_11340;Dbxref=NCBI_GP:PDP42813.1;Name=PDP42813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009276142.1;locus_tag=CLI86_11340;product=elongation factor G;protein_id=PDP42813.1;transl_table=11 NSLJ01000036.1 Genbank gene 4638 5762 . + . ID=gene-CLI86_11345;Name=CLI86_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11345 NSLJ01000036.1 Protein Homology CDS 4638 5762 . + 0 ID=cds-PDP42852.1;Parent=gene-CLI86_11345;Dbxref=NCBI_GP:PDP42852.1;Name=PDP42852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858860.1;locus_tag=CLI86_11345;product=coproporphyrinogen III oxidase;protein_id=PDP42852.1;transl_table=11 NSLJ01000036.1 Genbank gene 5892 6467 . + . ID=gene-CLI86_11350;Name=CLI86_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11350 NSLJ01000036.1 Protein Homology CDS 5892 6467 . + 0 ID=cds-PDP42814.1;Parent=gene-CLI86_11350;Dbxref=NCBI_GP:PDP42814.1;Name=PDP42814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154394.1;locus_tag=CLI86_11350;product=zeta toxin;protein_id=PDP42814.1;transl_table=11 NSLJ01000036.1 Genbank gene 6930 7673 . + . ID=gene-CLI86_11355;Name=CLI86_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11355 NSLJ01000036.1 Protein Homology CDS 6930 7673 . + 0 ID=cds-PDP42815.1;Parent=gene-CLI86_11355;Dbxref=NCBI_GP:PDP42815.1;Name=PDP42815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149992.1;locus_tag=CLI86_11355;product=ABC transporter permease;protein_id=PDP42815.1;transl_table=11 NSLJ01000036.1 Genbank gene 7673 8446 . + . ID=gene-CLI86_11360;Name=CLI86_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11360 NSLJ01000036.1 Protein Homology CDS 7673 8446 . + 0 ID=cds-PDP42816.1;Parent=gene-CLI86_11360;Dbxref=NCBI_GP:PDP42816.1;Name=PDP42816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224925.1;locus_tag=CLI86_11360;product=ABC transporter ATP-binding protein;protein_id=PDP42816.1;transl_table=11 NSLJ01000036.1 Genbank gene 8583 9062 . - . ID=gene-CLI86_11365;Name=CLI86_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11365 NSLJ01000036.1 Protein Homology CDS 8583 9062 . - 0 ID=cds-PDP42817.1;Parent=gene-CLI86_11365;Dbxref=NCBI_GP:PDP42817.1;Name=PDP42817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867127.1;locus_tag=CLI86_11365;product=50S ribosomal protein L17;protein_id=PDP42817.1;transl_table=11 NSLJ01000036.1 Genbank gene 9069 10061 . - . ID=gene-CLI86_11370;Name=CLI86_11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11370 NSLJ01000036.1 Protein Homology CDS 9069 10061 . - 0 ID=cds-PDP42818.1;Parent=gene-CLI86_11370;Dbxref=NCBI_GP:PDP42818.1;Name=PDP42818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318526.1;locus_tag=CLI86_11370;product=DNA-directed RNA polymerase subunit alpha;protein_id=PDP42818.1;transl_table=11 NSLJ01000036.1 Genbank gene 10069 10674 . - . ID=gene-CLI86_11375;Name=CLI86_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11375 NSLJ01000036.1 Protein Homology CDS 10069 10674 . - 0 ID=cds-PDP42819.1;Parent=gene-CLI86_11375;Dbxref=NCBI_GP:PDP42819.1;Name=PDP42819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667875.1;locus_tag=CLI86_11375;product=30S ribosomal protein S4;protein_id=PDP42819.1;transl_table=11 NSLJ01000036.1 Genbank gene 10789 11178 . - . ID=gene-CLI86_11380;Name=CLI86_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11380 NSLJ01000036.1 Protein Homology CDS 10789 11178 . - 0 ID=cds-PDP42820.1;Parent=gene-CLI86_11380;Dbxref=NCBI_GP:PDP42820.1;Name=PDP42820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007567382.1;locus_tag=CLI86_11380;product=30S ribosomal protein S11;protein_id=PDP42820.1;transl_table=11 NSLJ01000036.1 Genbank gene 11188 11568 . - . ID=gene-CLI86_11385;Name=CLI86_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11385 NSLJ01000036.1 Protein Homology CDS 11188 11568 . - 0 ID=cds-PDP42821.1;Parent=gene-CLI86_11385;Dbxref=NCBI_GP:PDP42821.1;Name=PDP42821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1;locus_tag=CLI86_11385;product=30S ribosomal protein S13;protein_id=PDP42821.1;transl_table=11 NSLJ01000036.1 Genbank gene 11604 11720 . - . ID=gene-CLI86_11390;Name=CLI86_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11390 NSLJ01000036.1 Protein Homology CDS 11604 11720 . - 0 ID=cds-PDP42822.1;Parent=gene-CLI86_11390;Dbxref=NCBI_GP:PDP42822.1;Name=PDP42822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009160995.1;locus_tag=CLI86_11390;product=50S ribosomal protein L36;protein_id=PDP42822.1;transl_table=11 NSLJ01000036.1 Genbank gene 11746 11964 . - . ID=gene-CLI86_11395;Name=CLI86_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11395 NSLJ01000036.1 Protein Homology CDS 11746 11964 . - 0 ID=cds-PDP42823.1;Parent=gene-CLI86_11395;Dbxref=NCBI_GP:PDP42823.1;Name=PDP42823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018109212.1;locus_tag=CLI86_11395;product=translation initiation factor IF-1;protein_id=PDP42823.1;transl_table=11 NSLJ01000036.1 Genbank gene 11968 12750 . - . ID=gene-CLI86_11400;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CLI86_11400 NSLJ01000036.1 Protein Homology CDS 11968 12750 . - 0 ID=cds-PDP42824.1;Parent=gene-CLI86_11400;Dbxref=NCBI_GP:PDP42824.1;Name=PDP42824.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318520.1;locus_tag=CLI86_11400;product=type I methionyl aminopeptidase;protein_id=PDP42824.1;transl_table=11 NSLJ01000036.1 Genbank gene 12753 14093 . - . ID=gene-CLI86_11405;Name=CLI86_11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11405 NSLJ01000036.1 Protein Homology CDS 12753 14093 . - 0 ID=cds-PDP42825.1;Parent=gene-CLI86_11405;Dbxref=NCBI_GP:PDP42825.1;Name=PDP42825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854004.1;locus_tag=CLI86_11405;product=preprotein translocase subunit SecY;protein_id=PDP42825.1;transl_table=11 NSLJ01000036.1 Genbank gene 14096 14566 . - . ID=gene-CLI86_11410;Name=CLI86_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11410 NSLJ01000036.1 Protein Homology CDS 14096 14566 . - 0 ID=cds-PDP42826.1;Parent=gene-CLI86_11410;Dbxref=NCBI_GP:PDP42826.1;Name=PDP42826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224915.1;locus_tag=CLI86_11410;product=50S ribosomal protein L15;protein_id=PDP42826.1;transl_table=11 NSLJ01000036.1 Genbank gene 14619 14795 . - . ID=gene-CLI86_11415;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CLI86_11415 NSLJ01000036.1 Protein Homology CDS 14619 14795 . - 0 ID=cds-PDP42827.1;Parent=gene-CLI86_11415;Dbxref=NCBI_GP:PDP42827.1;Name=PDP42827.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859531.1;locus_tag=CLI86_11415;product=50S ribosomal protein L30;protein_id=PDP42827.1;transl_table=11 NSLJ01000036.1 Genbank gene 14813 15328 . - . ID=gene-CLI86_11420;Name=CLI86_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11420 NSLJ01000036.1 Protein Homology CDS 14813 15328 . - 0 ID=cds-PDP42828.1;Parent=gene-CLI86_11420;Dbxref=NCBI_GP:PDP42828.1;Name=PDP42828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844884.1;locus_tag=CLI86_11420;product=30S ribosomal protein S5;protein_id=PDP42828.1;transl_table=11 NSLJ01000036.1 Genbank gene 15334 15678 . - . ID=gene-CLI86_11425;Name=CLI86_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11425 NSLJ01000036.1 Protein Homology CDS 15334 15678 . - 0 ID=cds-PDP42829.1;Parent=gene-CLI86_11425;Dbxref=NCBI_GP:PDP42829.1;Name=PDP42829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634763.1;locus_tag=CLI86_11425;product=50S ribosomal protein L18;protein_id=PDP42829.1;transl_table=11 NSLJ01000036.1 Genbank gene 15703 16254 . - . ID=gene-CLI86_11430;Name=CLI86_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11430 NSLJ01000036.1 Protein Homology CDS 15703 16254 . - 0 ID=cds-PDP42830.1;Parent=gene-CLI86_11430;Dbxref=NCBI_GP:PDP42830.1;Name=PDP42830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859534.1;locus_tag=CLI86_11430;product=50S ribosomal protein L6;protein_id=PDP42830.1;transl_table=11 NSLJ01000036.1 Genbank gene 16274 16669 . - . ID=gene-CLI86_11435;Name=CLI86_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11435 NSLJ01000036.1 Protein Homology CDS 16274 16669 . - 0 ID=cds-PDP42831.1;Parent=gene-CLI86_11435;Dbxref=NCBI_GP:PDP42831.1;Name=PDP42831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782213.1;locus_tag=CLI86_11435;product=30S ribosomal protein S8;protein_id=PDP42831.1;transl_table=11 NSLJ01000036.1 Genbank gene 16740 17009 . - . ID=gene-CLI86_11440;Name=CLI86_11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11440 NSLJ01000036.1 Protein Homology CDS 16740 17009 . - 0 ID=cds-PDP42832.1;Parent=gene-CLI86_11440;Dbxref=NCBI_GP:PDP42832.1;Name=PDP42832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010251725.1;locus_tag=CLI86_11440;product=30S ribosomal protein S14;protein_id=PDP42832.1;transl_table=11 NSLJ01000036.1 Genbank gene 17013 17570 . - . ID=gene-CLI86_11445;Name=CLI86_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11445 NSLJ01000036.1 Protein Homology CDS 17013 17570 . - 0 ID=cds-PDP42853.1;Parent=gene-CLI86_11445;Dbxref=NCBI_GP:PDP42853.1;Name=PDP42853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811627.1;locus_tag=CLI86_11445;product=50S ribosomal protein L5;protein_id=PDP42853.1;transl_table=11 NSLJ01000036.1 Genbank gene 17570 17887 . - . ID=gene-CLI86_11450;Name=CLI86_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11450 NSLJ01000036.1 Protein Homology CDS 17570 17887 . - 0 ID=cds-PDP42833.1;Parent=gene-CLI86_11450;Dbxref=NCBI_GP:PDP42833.1;Name=PDP42833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009132598.1;locus_tag=CLI86_11450;product=50S ribosomal protein L24;protein_id=PDP42833.1;transl_table=11 NSLJ01000036.1 Genbank gene 17907 18272 . - . ID=gene-CLI86_11455;Name=CLI86_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11455 NSLJ01000036.1 Protein Homology CDS 17907 18272 . - 0 ID=cds-PDP42834.1;Parent=gene-CLI86_11455;Dbxref=NCBI_GP:PDP42834.1;Name=PDP42834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318509.1;locus_tag=CLI86_11455;product=50S ribosomal protein L14;protein_id=PDP42834.1;transl_table=11 NSLJ01000036.1 Genbank gene 18274 18543 . - . ID=gene-CLI86_11460;Name=CLI86_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11460 NSLJ01000036.1 Protein Homology CDS 18274 18543 . - 0 ID=cds-PDP42835.1;Parent=gene-CLI86_11460;Dbxref=NCBI_GP:PDP42835.1;Name=PDP42835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101449.1;locus_tag=CLI86_11460;product=30S ribosomal protein S17;protein_id=PDP42835.1;transl_table=11 NSLJ01000036.1 Genbank gene 18546 18743 . - . ID=gene-CLI86_11465;Name=CLI86_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11465 NSLJ01000036.1 Protein Homology CDS 18546 18743 . - 0 ID=cds-PDP42836.1;Parent=gene-CLI86_11465;Dbxref=NCBI_GP:PDP42836.1;Name=PDP42836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224904.1;locus_tag=CLI86_11465;product=50S ribosomal protein L29;protein_id=PDP42836.1;transl_table=11 NSLJ01000036.1 Genbank gene 18749 19183 . - . ID=gene-CLI86_11470;Name=CLI86_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11470 NSLJ01000036.1 Protein Homology CDS 18749 19183 . - 0 ID=cds-PDP42837.1;Parent=gene-CLI86_11470;Dbxref=NCBI_GP:PDP42837.1;Name=PDP42837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432248.1;locus_tag=CLI86_11470;product=50S ribosomal protein L16;protein_id=PDP42837.1;transl_table=11 NSLJ01000036.1 Genbank gene 19206 19979 . - . ID=gene-CLI86_11475;Name=CLI86_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11475 NSLJ01000036.1 Protein Homology CDS 19206 19979 . - 0 ID=cds-PDP42838.1;Parent=gene-CLI86_11475;Dbxref=NCBI_GP:PDP42838.1;Name=PDP42838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224902.1;locus_tag=CLI86_11475;product=30S ribosomal protein S3;protein_id=PDP42838.1;transl_table=11 NSLJ01000036.1 Genbank gene 19986 20417 . - . ID=gene-CLI86_11480;Name=CLI86_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11480 NSLJ01000036.1 Protein Homology CDS 19986 20417 . - 0 ID=cds-PDP42839.1;Parent=gene-CLI86_11480;Dbxref=NCBI_GP:PDP42839.1;Name=PDP42839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224901.1;locus_tag=CLI86_11480;product=50S ribosomal protein L22;protein_id=PDP42839.1;transl_table=11 NSLJ01000036.1 Genbank gene 20440 20706 . - . ID=gene-CLI86_11485;Name=CLI86_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11485 NSLJ01000036.1 Protein Homology CDS 20440 20706 . - 0 ID=cds-PDP42840.1;Parent=gene-CLI86_11485;Dbxref=NCBI_GP:PDP42840.1;Name=PDP42840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1;locus_tag=CLI86_11485;product=30S ribosomal protein S19;protein_id=PDP42840.1;transl_table=11 NSLJ01000036.1 Genbank gene 20726 21550 . - . ID=gene-CLI86_11490;Name=CLI86_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11490 NSLJ01000036.1 Protein Homology CDS 20726 21550 . - 0 ID=cds-PDP42841.1;Parent=gene-CLI86_11490;Dbxref=NCBI_GP:PDP42841.1;Name=PDP42841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853970.1;locus_tag=CLI86_11490;product=50S ribosomal protein L2;protein_id=PDP42841.1;transl_table=11 NSLJ01000036.1 Genbank gene 21557 21850 . - . ID=gene-CLI86_11495;Name=CLI86_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11495 NSLJ01000036.1 Protein Homology CDS 21557 21850 . - 0 ID=cds-PDP42842.1;Parent=gene-CLI86_11495;Dbxref=NCBI_GP:PDP42842.1;Name=PDP42842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224897.1;locus_tag=CLI86_11495;product=50S ribosomal protein L23;protein_id=PDP42842.1;transl_table=11 NSLJ01000036.1 Genbank gene 21867 22496 . - . ID=gene-CLI86_11500;Name=CLI86_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11500 NSLJ01000036.1 Protein Homology CDS 21867 22496 . - 0 ID=cds-PDP42843.1;Parent=gene-CLI86_11500;Dbxref=NCBI_GP:PDP42843.1;Name=PDP42843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859545.1;locus_tag=CLI86_11500;product=50S ribosomal protein L4;protein_id=PDP42843.1;transl_table=11 NSLJ01000036.1 Genbank gene 22501 23118 . - . ID=gene-CLI86_11505;Name=CLI86_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11505 NSLJ01000036.1 Protein Homology CDS 22501 23118 . - 0 ID=cds-PDP42844.1;Parent=gene-CLI86_11505;Dbxref=NCBI_GP:PDP42844.1;Name=PDP42844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275270.1;locus_tag=CLI86_11505;product=50S ribosomal protein L3;protein_id=PDP42844.1;transl_table=11 NSLJ01000036.1 Genbank gene 23138 23443 . - . ID=gene-CLI86_11510;Name=CLI86_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11510 NSLJ01000036.1 Protein Homology CDS 23138 23443 . - 0 ID=cds-PDP42845.1;Parent=gene-CLI86_11510;Dbxref=NCBI_GP:PDP42845.1;Name=PDP42845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782187.1;locus_tag=CLI86_11510;product=30S ribosomal protein S10;protein_id=PDP42845.1;transl_table=11 NSLJ01000036.1 Genbank gene 23461 25587 . - . ID=gene-CLI86_11515;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CLI86_11515 NSLJ01000036.1 Protein Homology CDS 23461 25587 . - 0 ID=cds-PDP42854.1;Parent=gene-CLI86_11515;Dbxref=NCBI_GP:PDP42854.1;Name=PDP42854.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359651.1;locus_tag=CLI86_11515;product=elongation factor G;protein_id=PDP42854.1;transl_table=11 NSLJ01000036.1 Genbank gene 25608 26084 . - . ID=gene-CLI86_11520;Name=CLI86_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11520 NSLJ01000036.1 Protein Homology CDS 25608 26084 . - 0 ID=cds-PDP42855.1;Parent=gene-CLI86_11520;Dbxref=NCBI_GP:PDP42855.1;Name=PDP42855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541343.1;locus_tag=CLI86_11520;product=30S ribosomal protein S7;protein_id=PDP42855.1;transl_table=11 NSLJ01000036.1 Genbank gene 26249 26638 . - . ID=gene-CLI86_11525;Name=CLI86_11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11525 NSLJ01000036.1 Protein Homology CDS 26249 26638 . - 0 ID=cds-PDP42846.1;Parent=gene-CLI86_11525;Dbxref=NCBI_GP:PDP42846.1;Name=PDP42846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224891.1;locus_tag=CLI86_11525;product=30S ribosomal protein S12;protein_id=PDP42846.1;transl_table=11 NSLJ01000036.1 Genbank gene 27350 28639 . - . ID=gene-CLI86_11530;Name=CLI86_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11530 NSLJ01000036.1 Protein Homology CDS 27350 28639 . - 0 ID=cds-PDP42847.1;Parent=gene-CLI86_11530;Dbxref=NCBI_GP:PDP42847.1;Name=PDP42847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853916.1;locus_tag=CLI86_11530;product=methionine adenosyltransferase;protein_id=PDP42847.1;transl_table=11 NSLJ01000036.1 Genbank gene 29063 29557 . + . ID=gene-CLI86_11535;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CLI86_11535 NSLJ01000036.1 Protein Homology CDS 29063 29557 . + 0 ID=cds-PDP42848.1;Parent=gene-CLI86_11535;Dbxref=NCBI_GP:PDP42848.1;Name=PDP42848.1;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224888.1;locus_tag=CLI86_11535;product=cytidine deaminase;protein_id=PDP42848.1;transl_table=11 NSLJ01000036.1 Genbank gene 29696 30202 . + . ID=gene-CLI86_11540;Name=CLI86_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11540 NSLJ01000036.1 Protein Homology CDS 29696 30202 . + 0 ID=cds-PDP42849.1;Parent=gene-CLI86_11540;Dbxref=NCBI_GP:PDP42849.1;Name=PDP42849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150580.1;locus_tag=CLI86_11540;product=RNA polymerase sigma factor;protein_id=PDP42849.1;transl_table=11 NSLJ01000036.1 Genbank gene 30233 32332 . - . ID=gene-CLI86_11545;Name=CLI86_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11545 NSLJ01000036.1 Protein Homology CDS 30233 32332 . - 0 ID=cds-PDP42850.1;Parent=gene-CLI86_11545;Dbxref=NCBI_GP:PDP42850.1;Name=PDP42850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224886.1;locus_tag=CLI86_11545;product=DNA topoisomerase III;protein_id=PDP42850.1;transl_table=11 ##sequence-region NSLJ01000037.1 1 32592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000037.1 Genbank region 1 32592 . + . ID=NSLJ01000037.1:1..32592;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000037.1 Genbank gene 1 224 . + . ID=gene-CLI86_11550;Name=CLI86_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11550;partial=true;start_range=.,1 NSLJ01000037.1 Protein Homology CDS 1 224 . + 2 ID=cds-PDP42790.1;Parent=gene-CLI86_11550;Dbxref=NCBI_GP:PDP42790.1;Name=PDP42790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224166.1;locus_tag=CLI86_11550;partial=true;product=hypothetical protein;protein_id=PDP42790.1;start_range=.,1;transl_table=11 NSLJ01000037.1 Genbank gene 413 883 . + . ID=gene-CLI86_11555;Name=CLI86_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11555 NSLJ01000037.1 Protein Homology CDS 413 883 . + 0 ID=cds-PDP42791.1;Parent=gene-CLI86_11555;Dbxref=NCBI_GP:PDP42791.1;Name=PDP42791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16585.3;locus_tag=CLI86_11555;product=hypothetical protein;protein_id=PDP42791.1;transl_table=11 NSLJ01000037.1 Genbank gene 998 2542 . - . ID=gene-CLI86_11560;Name=CLI86_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11560 NSLJ01000037.1 Protein Homology CDS 998 2542 . - 0 ID=cds-PDP42803.1;Parent=gene-CLI86_11560;Dbxref=NCBI_GP:PDP42803.1;Name=PDP42803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224163.1;locus_tag=CLI86_11560;product=arylsulfatase;protein_id=PDP42803.1;transl_table=11 NSLJ01000037.1 Genbank gene 2656 4287 . - . ID=gene-CLI86_11565;Name=CLI86_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11565 NSLJ01000037.1 Protein Homology CDS 2656 4287 . - 0 ID=cds-PDP42792.1;Parent=gene-CLI86_11565;Dbxref=NCBI_GP:PDP42792.1;Name=PDP42792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224162.1;locus_tag=CLI86_11565;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP42792.1;transl_table=11 NSLJ01000037.1 Genbank gene 4296 7691 . - . ID=gene-CLI86_11570;Name=CLI86_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11570 NSLJ01000037.1 Protein Homology CDS 4296 7691 . - 0 ID=cds-PDP42793.1;Parent=gene-CLI86_11570;Dbxref=NCBI_GP:PDP42793.1;Name=PDP42793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224161.1;locus_tag=CLI86_11570;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP42793.1;transl_table=11 NSLJ01000037.1 Genbank gene 8146 9402 . + . ID=gene-CLI86_11575;Name=CLI86_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11575 NSLJ01000037.1 Protein Homology CDS 8146 9402 . + 0 ID=cds-PDP42794.1;Parent=gene-CLI86_11575;Dbxref=NCBI_GP:PDP42794.1;Name=PDP42794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856828.1;locus_tag=CLI86_11575;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP42794.1;transl_table=11 NSLJ01000037.1 Genbank gene 9497 12973 . + . ID=gene-CLI86_11580;Name=CLI86_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11580 NSLJ01000037.1 Protein Homology CDS 9497 12973 . + 0 ID=cds-PDP42795.1;Parent=gene-CLI86_11580;Dbxref=NCBI_GP:PDP42795.1;Name=PDP42795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966326.1;locus_tag=CLI86_11580;product=hypothetical protein;protein_id=PDP42795.1;transl_table=11 NSLJ01000037.1 Genbank gene 13044 13514 . + . ID=gene-CLI86_11585;Name=CLI86_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11585 NSLJ01000037.1 Protein Homology CDS 13044 13514 . + 0 ID=cds-PDP42796.1;Parent=gene-CLI86_11585;Dbxref=NCBI_GP:PDP42796.1;Name=PDP42796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856008.1;locus_tag=CLI86_11585;product=SPOR domain-containing protein;protein_id=PDP42796.1;transl_table=11 NSLJ01000037.1 Genbank gene 13696 14856 . - . ID=gene-CLI86_11590;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CLI86_11590 NSLJ01000037.1 Protein Homology CDS 13696 14856 . - 0 ID=cds-PDP42797.1;Parent=gene-CLI86_11590;Dbxref=NCBI_GP:PDP42797.1;Name=PDP42797.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224156.1;locus_tag=CLI86_11590;product=diaminopimelate decarboxylase;protein_id=PDP42797.1;transl_table=11 NSLJ01000037.1 Genbank gene 14885 16216 . - . ID=gene-CLI86_11595;Name=CLI86_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11595 NSLJ01000037.1 Protein Homology CDS 14885 16216 . - 0 ID=cds-PDP42798.1;Parent=gene-CLI86_11595;Dbxref=NCBI_GP:PDP42798.1;Name=PDP42798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224155.1;locus_tag=CLI86_11595;product=aspartate kinase;protein_id=PDP42798.1;transl_table=11 NSLJ01000037.1 Genbank gene 16258 16956 . - . ID=gene-CLI86_11600;Name=CLI86_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11600 NSLJ01000037.1 Protein Homology CDS 16258 16956 . - 0 ID=cds-PDP42804.1;Parent=gene-CLI86_11600;Dbxref=NCBI_GP:PDP42804.1;Name=PDP42804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008648599.1;locus_tag=CLI86_11600;product=phosphonate ABC transporter ATP-binding protein;protein_id=PDP42804.1;transl_table=11 NSLJ01000037.1 Genbank gene 17258 17331 . - . ID=gene-CLI86_11605;Name=CLI86_11605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_11605 NSLJ01000037.1 tRNAscan-SE tRNA 17258 17331 . - . ID=rna-CLI86_11605;Parent=gene-CLI86_11605;anticodon=(pos:complement(17295..17297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11605;product=tRNA-Met NSLJ01000037.1 tRNAscan-SE exon 17258 17331 . - . ID=exon-CLI86_11605-1;Parent=rna-CLI86_11605;anticodon=(pos:complement(17295..17297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_11605;product=tRNA-Met NSLJ01000037.1 Genbank gene 17733 18239 . + . ID=gene-CLI86_11610;Name=CLI86_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11610 NSLJ01000037.1 Protein Homology CDS 17733 18239 . + 0 ID=cds-PDP42805.1;Parent=gene-CLI86_11610;Dbxref=NCBI_GP:PDP42805.1;Name=PDP42805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224151.1;locus_tag=CLI86_11610;product=nitroreductase;protein_id=PDP42805.1;transl_table=11 NSLJ01000037.1 Genbank gene 18298 21033 . + . ID=gene-CLI86_11615;Name=CLI86_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11615 NSLJ01000037.1 Protein Homology CDS 18298 21033 . + 0 ID=cds-PDP42806.1;Parent=gene-CLI86_11615;Dbxref=NCBI_GP:PDP42806.1;Name=PDP42806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150515.1;locus_tag=CLI86_11615;product=alpha-rhamnosidase;protein_id=PDP42806.1;transl_table=11 NSLJ01000037.1 Genbank gene 21201 23519 . + . ID=gene-CLI86_11620;Name=CLI86_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11620 NSLJ01000037.1 GeneMarkS+ CDS 21201 23519 . + 0 ID=cds-PDP42799.1;Parent=gene-CLI86_11620;Dbxref=NCBI_GP:PDP42799.1;Name=PDP42799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11620;product=hypothetical protein;protein_id=PDP42799.1;transl_table=11 NSLJ01000037.1 Genbank gene 23623 25155 . + . ID=gene-CLI86_11625;Name=CLI86_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11625 NSLJ01000037.1 Protein Homology CDS 23623 25155 . + 0 ID=cds-PDP42807.1;Parent=gene-CLI86_11625;Dbxref=NCBI_GP:PDP42807.1;Name=PDP42807.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634279.1;locus_tag=CLI86_11625;product=phosphoglycerate mutase (2%2C3-diphosphoglycerate-independent);protein_id=PDP42807.1;transl_table=11 NSLJ01000037.1 Genbank gene 25257 25850 . + . ID=gene-CLI86_11630;Name=CLI86_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11630 NSLJ01000037.1 Protein Homology CDS 25257 25850 . + 0 ID=cds-PDP42800.1;Parent=gene-CLI86_11630;Dbxref=NCBI_GP:PDP42800.1;Name=PDP42800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224147.1;locus_tag=CLI86_11630;product=DUF3109 domain-containing protein;protein_id=PDP42800.1;transl_table=11 NSLJ01000037.1 Genbank gene 25935 28133 . - . ID=gene-CLI86_11635;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CLI86_11635 NSLJ01000037.1 Protein Homology CDS 25935 28133 . - 0 ID=cds-PDP42801.1;Parent=gene-CLI86_11635;Dbxref=NCBI_GP:PDP42801.1;Name=PDP42801.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224146.1;locus_tag=CLI86_11635;product=ribonuclease R;protein_id=PDP42801.1;transl_table=11 NSLJ01000037.1 Genbank gene 28123 29052 . - . ID=gene-CLI86_11640;Name=CLI86_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11640 NSLJ01000037.1 Protein Homology CDS 28123 29052 . - 0 ID=cds-PDP42808.1;Parent=gene-CLI86_11640;Dbxref=NCBI_GP:PDP42808.1;Name=PDP42808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005649686.1;locus_tag=CLI86_11640;product=regucalcin;protein_id=PDP42808.1;transl_table=11 NSLJ01000037.1 Genbank gene 29106 31718 . - . ID=gene-CLI86_11645;Name=CLI86_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11645 NSLJ01000037.1 Protein Homology CDS 29106 31718 . - 0 ID=cds-PDP42802.1;Parent=gene-CLI86_11645;Dbxref=NCBI_GP:PDP42802.1;Name=PDP42802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005863767.1;locus_tag=CLI86_11645;product=DNA mismatch repair protein MutS;protein_id=PDP42802.1;transl_table=11 NSLJ01000037.1 Genbank pseudogene 32314 32514 . - . ID=gene-CLI86_11650;Name=CLI86_11650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_11650;pseudo=true NSLJ01000037.1 Protein Homology CDS 32314 32514 . - 0 ID=cds-CLI86_11650;Parent=gene-CLI86_11650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_11650;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLJ01000038.1 1 32159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000038.1 Genbank region 1 32159 . + . ID=NSLJ01000038.1:1..32159;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000038.1 Genbank gene 885 2903 . - . ID=gene-CLI86_11655;Name=CLI86_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11655 NSLJ01000038.1 Protein Homology CDS 885 2903 . - 0 ID=cds-PDP42758.1;Parent=gene-CLI86_11655;Dbxref=NCBI_GP:PDP42758.1;Name=PDP42758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224862.1;locus_tag=CLI86_11655;product=TonB-dependent receptor;protein_id=PDP42758.1;transl_table=11 NSLJ01000038.1 Genbank gene 3055 3606 . + . ID=gene-CLI86_11660;Name=CLI86_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11660 NSLJ01000038.1 Protein Homology CDS 3055 3606 . + 0 ID=cds-PDP42785.1;Parent=gene-CLI86_11660;Dbxref=NCBI_GP:PDP42785.1;Name=PDP42785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008157139.1;locus_tag=CLI86_11660;product=RNA polymerase sigma factor;protein_id=PDP42785.1;transl_table=11 NSLJ01000038.1 Genbank gene 3659 4045 . + . ID=gene-CLI86_11665;Name=CLI86_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11665 NSLJ01000038.1 Protein Homology CDS 3659 4045 . + 0 ID=cds-PDP42759.1;Parent=gene-CLI86_11665;Dbxref=NCBI_GP:PDP42759.1;Name=PDP42759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017030.1;locus_tag=CLI86_11665;product=hypothetical protein;protein_id=PDP42759.1;transl_table=11 NSLJ01000038.1 Genbank gene 4052 4525 . + . ID=gene-CLI86_11670;Name=CLI86_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11670 NSLJ01000038.1 Protein Homology CDS 4052 4525 . + 0 ID=cds-PDP42760.1;Parent=gene-CLI86_11670;Dbxref=NCBI_GP:PDP42760.1;Name=PDP42760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224859.1;locus_tag=CLI86_11670;product=hypothetical protein;protein_id=PDP42760.1;transl_table=11 NSLJ01000038.1 Genbank gene 4543 4989 . - . ID=gene-CLI86_11675;Name=CLI86_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11675 NSLJ01000038.1 Protein Homology CDS 4543 4989 . - 0 ID=cds-PDP42761.1;Parent=gene-CLI86_11675;Dbxref=NCBI_GP:PDP42761.1;Name=PDP42761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02517.14;locus_tag=CLI86_11675;product=hypothetical protein;protein_id=PDP42761.1;transl_table=11 NSLJ01000038.1 Genbank gene 5017 5421 . - . ID=gene-CLI86_11680;Name=CLI86_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11680 NSLJ01000038.1 GeneMarkS+ CDS 5017 5421 . - 0 ID=cds-PDP42762.1;Parent=gene-CLI86_11680;Dbxref=NCBI_GP:PDP42762.1;Name=PDP42762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11680;product=hypothetical protein;protein_id=PDP42762.1;transl_table=11 NSLJ01000038.1 Genbank gene 5513 5758 . - . ID=gene-CLI86_11685;Name=CLI86_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11685 NSLJ01000038.1 Protein Homology CDS 5513 5758 . - 0 ID=cds-PDP42763.1;Parent=gene-CLI86_11685;Dbxref=NCBI_GP:PDP42763.1;Name=PDP42763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224858.1;locus_tag=CLI86_11685;product=RNA-binding protein;protein_id=PDP42763.1;transl_table=11 NSLJ01000038.1 Genbank gene 6069 7430 . + . ID=gene-CLI86_11690;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CLI86_11690 NSLJ01000038.1 Protein Homology CDS 6069 7430 . + 0 ID=cds-PDP42764.1;Parent=gene-CLI86_11690;Dbxref=NCBI_GP:PDP42764.1;Name=PDP42764.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224856.1;locus_tag=CLI86_11690;product=trigger factor;protein_id=PDP42764.1;transl_table=11 NSLJ01000038.1 Genbank gene 7444 8109 . + . ID=gene-CLI86_11695;Name=CLI86_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11695 NSLJ01000038.1 Protein Homology CDS 7444 8109 . + 0 ID=cds-PDP42786.1;Parent=gene-CLI86_11695;Dbxref=NCBI_GP:PDP42786.1;Name=PDP42786.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224855.1;locus_tag=CLI86_11695;product=ATP-dependent Clp protease proteolytic subunit;protein_id=PDP42786.1;transl_table=11 NSLJ01000038.1 Genbank gene 8127 9356 . + . ID=gene-CLI86_11700;Name=CLI86_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11700 NSLJ01000038.1 Protein Homology CDS 8127 9356 . + 0 ID=cds-PDP42765.1;Parent=gene-CLI86_11700;Dbxref=NCBI_GP:PDP42765.1;Name=PDP42765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017965.1;locus_tag=CLI86_11700;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=PDP42765.1;transl_table=11 NSLJ01000038.1 Genbank gene 9500 11743 . + . ID=gene-CLI86_11705;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CLI86_11705 NSLJ01000038.1 Protein Homology CDS 9500 11743 . + 0 ID=cds-PDP42787.1;Parent=gene-CLI86_11705;Dbxref=NCBI_GP:PDP42787.1;Name=PDP42787.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008143988.1;locus_tag=CLI86_11705;product=DNA helicase RecQ;protein_id=PDP42787.1;transl_table=11 NSLJ01000038.1 Genbank gene 11781 13379 . + . ID=gene-CLI86_11710;Name=CLI86_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11710 NSLJ01000038.1 Protein Homology CDS 11781 13379 . + 0 ID=cds-PDP42766.1;Parent=gene-CLI86_11710;Dbxref=NCBI_GP:PDP42766.1;Name=PDP42766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224852.1;locus_tag=CLI86_11710;product=parvulin peptidyl-prolyl isomerase;protein_id=PDP42766.1;transl_table=11 NSLJ01000038.1 Genbank gene 13396 14265 . + . ID=gene-CLI86_11715;Name=CLI86_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11715 NSLJ01000038.1 Protein Homology CDS 13396 14265 . + 0 ID=cds-PDP42767.1;Parent=gene-CLI86_11715;Dbxref=NCBI_GP:PDP42767.1;Name=PDP42767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224851.1;locus_tag=CLI86_11715;product=hypothetical protein;protein_id=PDP42767.1;transl_table=11 NSLJ01000038.1 Genbank gene 14279 15640 . + . ID=gene-CLI86_11720;Name=CLI86_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11720 NSLJ01000038.1 Protein Homology CDS 14279 15640 . + 0 ID=cds-PDP42768.1;Parent=gene-CLI86_11720;Dbxref=NCBI_GP:PDP42768.1;Name=PDP42768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853944.1;locus_tag=CLI86_11720;product=peptidylprolyl isomerase;protein_id=PDP42768.1;transl_table=11 NSLJ01000038.1 Genbank gene 15637 17241 . + . ID=gene-CLI86_11725;Name=CLI86_11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11725 NSLJ01000038.1 Protein Homology CDS 15637 17241 . + 0 ID=cds-PDP42769.1;Parent=gene-CLI86_11725;Dbxref=NCBI_GP:PDP42769.1;Name=PDP42769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224849.1;locus_tag=CLI86_11725;product=hypothetical protein;protein_id=PDP42769.1;transl_table=11 NSLJ01000038.1 Genbank gene 17257 17568 . + . ID=gene-CLI86_11730;Name=CLI86_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11730 NSLJ01000038.1 Protein Homology CDS 17257 17568 . + 0 ID=cds-PDP42770.1;Parent=gene-CLI86_11730;Dbxref=NCBI_GP:PDP42770.1;Name=PDP42770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224848.1;locus_tag=CLI86_11730;product=hypothetical protein;protein_id=PDP42770.1;transl_table=11 NSLJ01000038.1 Genbank gene 17565 19391 . + . ID=gene-CLI86_11735;Name=CLI86_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11735 NSLJ01000038.1 Protein Homology CDS 17565 19391 . + 0 ID=cds-PDP42771.1;Parent=gene-CLI86_11735;Dbxref=NCBI_GP:PDP42771.1;Name=PDP42771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224847.1;locus_tag=CLI86_11735;product=DNA mismatch repair protein MutL;protein_id=PDP42771.1;transl_table=11 NSLJ01000038.1 Genbank gene 19707 20018 . - . ID=gene-CLI86_11740;Name=CLI86_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11740 NSLJ01000038.1 GeneMarkS+ CDS 19707 20018 . - 0 ID=cds-PDP42772.1;Parent=gene-CLI86_11740;Dbxref=NCBI_GP:PDP42772.1;Name=PDP42772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11740;product=hypothetical protein;protein_id=PDP42772.1;transl_table=11 NSLJ01000038.1 Genbank gene 20484 20687 . - . ID=gene-CLI86_11745;Name=CLI86_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11745 NSLJ01000038.1 GeneMarkS+ CDS 20484 20687 . - 0 ID=cds-PDP42773.1;Parent=gene-CLI86_11745;Dbxref=NCBI_GP:PDP42773.1;Name=PDP42773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11745;product=hypothetical protein;protein_id=PDP42773.1;transl_table=11 NSLJ01000038.1 Genbank gene 20762 21511 . - . ID=gene-CLI86_11750;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CLI86_11750 NSLJ01000038.1 Protein Homology CDS 20762 21511 . - 0 ID=cds-PDP42774.1;Parent=gene-CLI86_11750;Dbxref=NCBI_GP:PDP42774.1;Name=PDP42774.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224846.1;locus_tag=CLI86_11750;product=LPS export ABC transporter ATP-binding protein;protein_id=PDP42774.1;transl_table=11 NSLJ01000038.1 Genbank gene 21612 22088 . + . ID=gene-CLI86_11755;Name=CLI86_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11755 NSLJ01000038.1 Protein Homology CDS 21612 22088 . + 0 ID=cds-PDP42775.1;Parent=gene-CLI86_11755;Dbxref=NCBI_GP:PDP42775.1;Name=PDP42775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224845.1;locus_tag=CLI86_11755;product=thioesterase;protein_id=PDP42775.1;transl_table=11 NSLJ01000038.1 Genbank gene 22180 23187 . - . ID=gene-CLI86_11760;Name=CLI86_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11760 NSLJ01000038.1 Protein Homology CDS 22180 23187 . - 0 ID=cds-PDP42776.1;Parent=gene-CLI86_11760;Dbxref=NCBI_GP:PDP42776.1;Name=PDP42776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224844.1;locus_tag=CLI86_11760;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=PDP42776.1;transl_table=11 NSLJ01000038.1 Genbank gene 23209 23991 . - . ID=gene-CLI86_11765;Name=CLI86_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11765 NSLJ01000038.1 Protein Homology CDS 23209 23991 . - 0 ID=cds-PDP42777.1;Parent=gene-CLI86_11765;Dbxref=NCBI_GP:PDP42777.1;Name=PDP42777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613327.1;locus_tag=CLI86_11765;product=electron transfer flavoprotein subunit beta;protein_id=PDP42777.1;transl_table=11 NSLJ01000038.1 Genbank gene 23998 25146 . - . ID=gene-CLI86_11770;Name=CLI86_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11770 NSLJ01000038.1 Protein Homology CDS 23998 25146 . - 0 ID=cds-PDP42778.1;Parent=gene-CLI86_11770;Dbxref=NCBI_GP:PDP42778.1;Name=PDP42778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224842.1;locus_tag=CLI86_11770;product=acyl-CoA dehydrogenase;protein_id=PDP42778.1;transl_table=11 NSLJ01000038.1 Genbank gene 25172 26530 . - . ID=gene-CLI86_11775;Name=CLI86_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11775 NSLJ01000038.1 Protein Homology CDS 25172 26530 . - 0 ID=cds-PDP42779.1;Parent=gene-CLI86_11775;Dbxref=NCBI_GP:PDP42779.1;Name=PDP42779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224841.1;locus_tag=CLI86_11775;product=succinate-semialdehyde dehydrogenase;protein_id=PDP42779.1;transl_table=11 NSLJ01000038.1 Genbank gene 26543 27658 . - . ID=gene-CLI86_11780;Name=CLI86_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11780 NSLJ01000038.1 Protein Homology CDS 26543 27658 . - 0 ID=cds-PDP42780.1;Parent=gene-CLI86_11780;Dbxref=NCBI_GP:PDP42780.1;Name=PDP42780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018357741.1;locus_tag=CLI86_11780;product=4-hydroxybutyrate dehydrogenase;protein_id=PDP42780.1;transl_table=11 NSLJ01000038.1 Genbank gene 27691 28983 . - . ID=gene-CLI86_11785;Name=CLI86_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11785 NSLJ01000038.1 Protein Homology CDS 27691 28983 . - 0 ID=cds-PDP42781.1;Parent=gene-CLI86_11785;Dbxref=NCBI_GP:PDP42781.1;Name=PDP42781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224839.1;locus_tag=CLI86_11785;product=4-hydroxybutyrate CoA-transferase;protein_id=PDP42781.1;transl_table=11 NSLJ01000038.1 Genbank gene 28986 29303 . - . ID=gene-CLI86_11790;Name=CLI86_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11790 NSLJ01000038.1 Protein Homology CDS 28986 29303 . - 0 ID=cds-PDP42782.1;Parent=gene-CLI86_11790;Dbxref=NCBI_GP:PDP42782.1;Name=PDP42782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224838.1;locus_tag=CLI86_11790;product=NifU family protein;protein_id=PDP42782.1;transl_table=11 NSLJ01000038.1 Genbank gene 29308 30768 . - . ID=gene-CLI86_11795;Name=CLI86_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11795 NSLJ01000038.1 Protein Homology CDS 29308 30768 . - 0 ID=cds-PDP42783.1;Parent=gene-CLI86_11795;Dbxref=NCBI_GP:PDP42783.1;Name=PDP42783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331893.1;locus_tag=CLI86_11795;product=4-hydroxybutyryl-CoA dehydratase;protein_id=PDP42783.1;transl_table=11 NSLJ01000038.1 cmsearch riboswitch 31033 31243 . - . ID=id-NSLJ01000038.1:31033..31243;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000038.1 Genbank gene 31365 31550 . - . ID=gene-CLI86_11800;Name=CLI86_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11800 NSLJ01000038.1 GeneMarkS+ CDS 31365 31550 . - 0 ID=cds-PDP42784.1;Parent=gene-CLI86_11800;Dbxref=NCBI_GP:PDP42784.1;Name=PDP42784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11800;product=hypothetical protein;protein_id=PDP42784.1;transl_table=11 ##sequence-region NSLJ01000039.1 1 29567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000039.1 Genbank region 1 29567 . + . ID=NSLJ01000039.1:1..29567;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000039.1 Genbank gene 1100 3169 . + . ID=gene-CLI86_11805;Name=CLI86_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11805 NSLJ01000039.1 Protein Homology CDS 1100 3169 . + 0 ID=cds-PDP42751.1;Parent=gene-CLI86_11805;Dbxref=NCBI_GP:PDP42751.1;Name=PDP42751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008862586.1;locus_tag=CLI86_11805;product=ATP-dependent DNA helicase RecG;protein_id=PDP42751.1;transl_table=11 NSLJ01000039.1 Genbank gene 3208 4434 . - . ID=gene-CLI86_11810;Name=CLI86_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11810 NSLJ01000039.1 Protein Homology CDS 3208 4434 . - 0 ID=cds-PDP42752.1;Parent=gene-CLI86_11810;Dbxref=NCBI_GP:PDP42752.1;Name=PDP42752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773044.1;locus_tag=CLI86_11810;product=peptidase M24;protein_id=PDP42752.1;transl_table=11 NSLJ01000039.1 Genbank gene 4449 5279 . - . ID=gene-CLI86_11815;Name=CLI86_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11815 NSLJ01000039.1 Protein Homology CDS 4449 5279 . - 0 ID=cds-PDP42733.1;Parent=gene-CLI86_11815;Dbxref=NCBI_GP:PDP42733.1;Name=PDP42733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14125.4;locus_tag=CLI86_11815;product=hypothetical protein;protein_id=PDP42733.1;transl_table=11 NSLJ01000039.1 Genbank gene 5269 7053 . - . ID=gene-CLI86_11820;Name=CLI86_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11820 NSLJ01000039.1 Protein Homology CDS 5269 7053 . - 0 ID=cds-PDP42734.1;Parent=gene-CLI86_11820;Dbxref=NCBI_GP:PDP42734.1;Name=PDP42734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224866.1;locus_tag=CLI86_11820;product=hypothetical protein;protein_id=PDP42734.1;transl_table=11 NSLJ01000039.1 Genbank gene 7087 7521 . - . ID=gene-CLI86_11825;Name=CLI86_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11825 NSLJ01000039.1 Protein Homology CDS 7087 7521 . - 0 ID=cds-PDP42753.1;Parent=gene-CLI86_11825;Dbxref=NCBI_GP:PDP42753.1;Name=PDP42753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860037.1;locus_tag=CLI86_11825;product=dUTP diphosphatase;protein_id=PDP42753.1;transl_table=11 NSLJ01000039.1 Genbank gene 7643 8368 . - . ID=gene-CLI86_11830;Name=CLI86_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11830 NSLJ01000039.1 Protein Homology CDS 7643 8368 . - 0 ID=cds-PDP42735.1;Parent=gene-CLI86_11830;Dbxref=NCBI_GP:PDP42735.1;Name=PDP42735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564342.1;locus_tag=CLI86_11830;product=nitroreductase family protein;protein_id=PDP42735.1;transl_table=11 NSLJ01000039.1 Genbank gene 8439 9542 . - . ID=gene-CLI86_11835;Name=CLI86_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11835 NSLJ01000039.1 Protein Homology CDS 8439 9542 . - 0 ID=cds-PDP42736.1;Parent=gene-CLI86_11835;Dbxref=NCBI_GP:PDP42736.1;Name=PDP42736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224869.1;locus_tag=CLI86_11835;product=endonuclease;protein_id=PDP42736.1;transl_table=11 NSLJ01000039.1 Genbank gene 9559 11067 . - . ID=gene-CLI86_11840;Name=CLI86_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11840 NSLJ01000039.1 Protein Homology CDS 9559 11067 . - 0 ID=cds-PDP42737.1;Parent=gene-CLI86_11840;Dbxref=NCBI_GP:PDP42737.1;Name=PDP42737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864541.1;locus_tag=CLI86_11840;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP42737.1;transl_table=11 NSLJ01000039.1 Genbank gene 11079 14462 . - . ID=gene-CLI86_11845;Name=CLI86_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11845 NSLJ01000039.1 Protein Homology CDS 11079 14462 . - 0 ID=cds-PDP42738.1;Parent=gene-CLI86_11845;Dbxref=NCBI_GP:PDP42738.1;Name=PDP42738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224871.1;locus_tag=CLI86_11845;product=SusC/RagA family protein;protein_id=PDP42738.1;transl_table=11 NSLJ01000039.1 Genbank gene 14493 15509 . - . ID=gene-CLI86_11850;Name=CLI86_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11850 NSLJ01000039.1 Protein Homology CDS 14493 15509 . - 0 ID=cds-PDP42739.1;Parent=gene-CLI86_11850;Dbxref=NCBI_GP:PDP42739.1;Name=PDP42739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16344.3;locus_tag=CLI86_11850;product=anti-sigma factor;protein_id=PDP42739.1;transl_table=11 NSLJ01000039.1 Genbank gene 15632 16207 . + . ID=gene-CLI86_11855;Name=CLI86_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11855 NSLJ01000039.1 Protein Homology CDS 15632 16207 . + 0 ID=cds-PDP42740.1;Parent=gene-CLI86_11855;Dbxref=NCBI_GP:PDP42740.1;Name=PDP42740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224873.1;locus_tag=CLI86_11855;product=RNA polymerase sigma-70 factor;protein_id=PDP42740.1;transl_table=11 NSLJ01000039.1 Genbank gene 16202 16951 . - . ID=gene-CLI86_11860;Name=CLI86_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11860 NSLJ01000039.1 Protein Homology CDS 16202 16951 . - 0 ID=cds-PDP42741.1;Parent=gene-CLI86_11860;Dbxref=NCBI_GP:PDP42741.1;Name=PDP42741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224874.1;locus_tag=CLI86_11860;product=nucleotidyltransferase family protein;protein_id=PDP42741.1;transl_table=11 NSLJ01000039.1 Genbank gene 16948 18381 . - . ID=gene-CLI86_11865;Name=CLI86_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11865 NSLJ01000039.1 Protein Homology CDS 16948 18381 . - 0 ID=cds-PDP42742.1;Parent=gene-CLI86_11865;Dbxref=NCBI_GP:PDP42742.1;Name=PDP42742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224875.1;locus_tag=CLI86_11865;product=phosphotransferase;protein_id=PDP42742.1;transl_table=11 NSLJ01000039.1 Genbank gene 18580 20640 . + . ID=gene-CLI86_11870;Name=CLI86_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11870 NSLJ01000039.1 Protein Homology CDS 18580 20640 . + 0 ID=cds-PDP42743.1;Parent=gene-CLI86_11870;Dbxref=NCBI_GP:PDP42743.1;Name=PDP42743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654660.1;locus_tag=CLI86_11870;product=dihydrofolate reductase;protein_id=PDP42743.1;transl_table=11 NSLJ01000039.1 Genbank gene 20685 21167 . + . ID=gene-CLI86_11875;Name=CLI86_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11875 NSLJ01000039.1 Protein Homology CDS 20685 21167 . + 0 ID=cds-PDP42744.1;Parent=gene-CLI86_11875;Dbxref=NCBI_GP:PDP42744.1;Name=PDP42744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224877.1;locus_tag=CLI86_11875;product=transcriptional repressor;protein_id=PDP42744.1;transl_table=11 NSLJ01000039.1 Genbank gene 21202 22473 . + . ID=gene-CLI86_11880;Name=CLI86_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11880 NSLJ01000039.1 Protein Homology CDS 21202 22473 . + 0 ID=cds-PDP42745.1;Parent=gene-CLI86_11880;Dbxref=NCBI_GP:PDP42745.1;Name=PDP42745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004301093.1;locus_tag=CLI86_11880;product=adenylosuccinate synthase;protein_id=PDP42745.1;transl_table=11 NSLJ01000039.1 Genbank gene 22584 23270 . + . ID=gene-CLI86_11885;Name=CLI86_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11885 NSLJ01000039.1 Protein Homology CDS 22584 23270 . + 0 ID=cds-PDP42754.1;Parent=gene-CLI86_11885;Dbxref=NCBI_GP:PDP42754.1;Name=PDP42754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224879.1;locus_tag=CLI86_11885;product=hypothetical protein;protein_id=PDP42754.1;transl_table=11 NSLJ01000039.1 Genbank gene 23274 24635 . + . ID=gene-CLI86_11890;Name=CLI86_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11890 NSLJ01000039.1 Protein Homology CDS 23274 24635 . + 0 ID=cds-PDP42746.1;Parent=gene-CLI86_11890;Dbxref=NCBI_GP:PDP42746.1;Name=PDP42746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007214868.1;locus_tag=CLI86_11890;product=histidine--tRNA ligase;protein_id=PDP42746.1;transl_table=11 NSLJ01000039.1 Genbank gene 24817 26559 . - . ID=gene-CLI86_11895;Name=CLI86_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11895 NSLJ01000039.1 Protein Homology CDS 24817 26559 . - 0 ID=cds-PDP42747.1;Parent=gene-CLI86_11895;Dbxref=NCBI_GP:PDP42747.1;Name=PDP42747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224881.1;locus_tag=CLI86_11895;product=peptidase S8;protein_id=PDP42747.1;transl_table=11 NSLJ01000039.1 Genbank gene 26575 27366 . - . ID=gene-CLI86_11900;Name=CLI86_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11900 NSLJ01000039.1 GeneMarkS+ CDS 26575 27366 . - 0 ID=cds-PDP42748.1;Parent=gene-CLI86_11900;Dbxref=NCBI_GP:PDP42748.1;Name=PDP42748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_11900;product=hypothetical protein;protein_id=PDP42748.1;transl_table=11 NSLJ01000039.1 Genbank gene 27363 28157 . - . ID=gene-CLI86_11905;Name=CLI86_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11905 NSLJ01000039.1 Protein Homology CDS 27363 28157 . - 0 ID=cds-PDP42749.1;Parent=gene-CLI86_11905;Dbxref=NCBI_GP:PDP42749.1;Name=PDP42749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224883.1;locus_tag=CLI86_11905;product=hypothetical protein;protein_id=PDP42749.1;transl_table=11 NSLJ01000039.1 Genbank gene 28339 29292 . - . ID=gene-CLI86_11910;Name=CLI86_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11910 NSLJ01000039.1 Protein Homology CDS 28339 29292 . - 0 ID=cds-PDP42750.1;Parent=gene-CLI86_11910;Dbxref=NCBI_GP:PDP42750.1;Name=PDP42750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13884.4;locus_tag=CLI86_11910;product=hypothetical protein;protein_id=PDP42750.1;transl_table=11 NSLJ01000039.1 Genbank gene 29433 29567 . + . ID=gene-CLI86_11915;Name=CLI86_11915;end_range=29567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11915;partial=true NSLJ01000039.1 Protein Homology CDS 29433 29567 . + 0 ID=cds-PDP42755.1;Parent=gene-CLI86_11915;Dbxref=NCBI_GP:PDP42755.1;Name=PDP42755.1;end_range=29567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224738.1;locus_tag=CLI86_11915;partial=true;product=IS110 family transposase;protein_id=PDP42755.1;transl_table=11 ##sequence-region NSLJ01000003.1 1 137503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000003.1 Genbank region 1 137503 . + . ID=NSLJ01000003.1:1..137503;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000003.1 Genbank gene 325 1557 . + . ID=gene-CLI86_01445;Name=CLI86_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01445 NSLJ01000003.1 Protein Homology CDS 325 1557 . + 0 ID=cds-PDP44805.1;Parent=gene-CLI86_01445;Dbxref=NCBI_GP:PDP44805.1;Name=PDP44805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346466.1;locus_tag=CLI86_01445;product=integrase;protein_id=PDP44805.1;transl_table=11 NSLJ01000003.1 Genbank gene 1550 2557 . + . ID=gene-CLI86_01450;Name=CLI86_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01450 NSLJ01000003.1 Protein Homology CDS 1550 2557 . + 0 ID=cds-PDP44806.1;Parent=gene-CLI86_01450;Dbxref=NCBI_GP:PDP44806.1;Name=PDP44806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343771.1;locus_tag=CLI86_01450;product=nicotinate-nucleotide pyrophosphorylase;protein_id=PDP44806.1;transl_table=11 NSLJ01000003.1 Genbank gene 2544 3572 . + . ID=gene-CLI86_01455;Name=CLI86_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01455 NSLJ01000003.1 Protein Homology CDS 2544 3572 . + 0 ID=cds-PDP44807.1;Parent=gene-CLI86_01455;Dbxref=NCBI_GP:PDP44807.1;Name=PDP44807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343768.1;locus_tag=CLI86_01455;product=integrase;protein_id=PDP44807.1;transl_table=11 NSLJ01000003.1 Genbank pseudogene 3697 4476 . + . ID=gene-CLI86_01460;Name=CLI86_01460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01460;pseudo=true NSLJ01000003.1 Protein Homology CDS 3697 4476 . + 0 ID=cds-CLI86_01460;Parent=gene-CLI86_01460;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224719.1;locus_tag=CLI86_01460;product=nucleotidyltransferase;pseudo=true;transl_table=11 NSLJ01000003.1 Genbank pseudogene 4854 6172 . + . ID=gene-CLI86_01465;Name=CLI86_01465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01465;pseudo=true NSLJ01000003.1 Protein Homology CDS 4854 6172 . + 0 ID=cds-CLI86_01465;Parent=gene-CLI86_01465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816563.1;locus_tag=CLI86_01465;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLJ01000003.1 Genbank gene 6313 6400 . - . ID=gene-CLI86_01470;Name=CLI86_01470;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_01470 NSLJ01000003.1 tRNAscan-SE tRNA 6313 6400 . - . ID=rna-CLI86_01470;Parent=gene-CLI86_01470;anticodon=(pos:complement(6364..6366));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_01470;product=tRNA-Ser NSLJ01000003.1 tRNAscan-SE exon 6313 6400 . - . ID=exon-CLI86_01470-1;Parent=rna-CLI86_01470;anticodon=(pos:complement(6364..6366));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_01470;product=tRNA-Ser NSLJ01000003.1 Genbank gene 7053 7985 . + . ID=gene-CLI86_01475;Name=CLI86_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01475 NSLJ01000003.1 Protein Homology CDS 7053 7985 . + 0 ID=cds-PDP44808.1;Parent=gene-CLI86_01475;Dbxref=NCBI_GP:PDP44808.1;Name=PDP44808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224718.1;locus_tag=CLI86_01475;product=mechanosensitive ion channel protein MscS;protein_id=PDP44808.1;transl_table=11 NSLJ01000003.1 Genbank gene 7997 9253 . + . ID=gene-CLI86_01480;Name=CLI86_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01480 NSLJ01000003.1 Protein Homology CDS 7997 9253 . + 0 ID=cds-PDP44899.1;Parent=gene-CLI86_01480;Dbxref=NCBI_GP:PDP44899.1;Name=PDP44899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798440.1;locus_tag=CLI86_01480;product=collagenase-like protease;protein_id=PDP44899.1;transl_table=11 NSLJ01000003.1 Genbank gene 9317 9401 . - . ID=gene-CLI86_01485;Name=CLI86_01485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_01485 NSLJ01000003.1 tRNAscan-SE tRNA 9317 9401 . - . ID=rna-CLI86_01485;Parent=gene-CLI86_01485;anticodon=(pos:complement(9365..9367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_01485;product=tRNA-Leu NSLJ01000003.1 tRNAscan-SE exon 9317 9401 . - . ID=exon-CLI86_01485-1;Parent=rna-CLI86_01485;anticodon=(pos:complement(9365..9367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_01485;product=tRNA-Leu NSLJ01000003.1 Genbank gene 9478 10743 . - . ID=gene-CLI86_01490;Name=CLI86_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01490 NSLJ01000003.1 Protein Homology CDS 9478 10743 . - 0 ID=cds-PDP44900.1;Parent=gene-CLI86_01490;Dbxref=NCBI_GP:PDP44900.1;Name=PDP44900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360861.1;locus_tag=CLI86_01490;product=PAP2 family protein;protein_id=PDP44900.1;transl_table=11 NSLJ01000003.1 Genbank gene 11058 12353 . - . ID=gene-CLI86_01495;Name=CLI86_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01495 NSLJ01000003.1 Protein Homology CDS 11058 12353 . - 0 ID=cds-PDP44809.1;Parent=gene-CLI86_01495;Dbxref=NCBI_GP:PDP44809.1;Name=PDP44809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224715.1;locus_tag=CLI86_01495;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=PDP44809.1;transl_table=11 NSLJ01000003.1 Genbank gene 12431 13273 . + . ID=gene-CLI86_01500;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CLI86_01500 NSLJ01000003.1 Protein Homology CDS 12431 13273 . + 0 ID=cds-PDP44901.1;Parent=gene-CLI86_01500;Dbxref=NCBI_GP:PDP44901.1;Name=PDP44901.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224714.1;locus_tag=CLI86_01500;product=dihydropteroate synthase;protein_id=PDP44901.1;transl_table=11 NSLJ01000003.1 Genbank gene 13283 14056 . + . ID=gene-CLI86_01505;Name=CLI86_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01505 NSLJ01000003.1 Protein Homology CDS 13283 14056 . + 0 ID=cds-PDP44810.1;Parent=gene-CLI86_01505;Dbxref=NCBI_GP:PDP44810.1;Name=PDP44810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634496.1;locus_tag=CLI86_01505;product=TIGR00159 family protein;protein_id=PDP44810.1;transl_table=11 NSLJ01000003.1 Genbank gene 14107 15126 . + . ID=gene-CLI86_01510;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CLI86_01510 NSLJ01000003.1 Protein Homology CDS 14107 15126 . + 0 ID=cds-PDP44811.1;Parent=gene-CLI86_01510;Dbxref=NCBI_GP:PDP44811.1;Name=PDP44811.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224712.1;locus_tag=CLI86_01510;product=phosphate acetyltransferase;protein_id=PDP44811.1;transl_table=11 NSLJ01000003.1 Genbank gene 15123 16334 . + . ID=gene-CLI86_01515;Name=CLI86_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01515 NSLJ01000003.1 Protein Homology CDS 15123 16334 . + 0 ID=cds-PDP44812.1;Parent=gene-CLI86_01515;Dbxref=NCBI_GP:PDP44812.1;Name=PDP44812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224711.1;locus_tag=CLI86_01515;product=acetate kinase;protein_id=PDP44812.1;transl_table=11 NSLJ01000003.1 Genbank gene 16409 16654 . - . ID=gene-CLI86_01520;Name=CLI86_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01520 NSLJ01000003.1 Protein Homology CDS 16409 16654 . - 0 ID=cds-PDP44813.1;Parent=gene-CLI86_01520;Dbxref=NCBI_GP:PDP44813.1;Name=PDP44813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225493.1;locus_tag=CLI86_01520;product=hypothetical protein;protein_id=PDP44813.1;transl_table=11 NSLJ01000003.1 Genbank gene 16967 18619 . - . ID=gene-CLI86_01525;Name=CLI86_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01525 NSLJ01000003.1 Protein Homology CDS 16967 18619 . - 0 ID=cds-PDP44814.1;Parent=gene-CLI86_01525;Dbxref=NCBI_GP:PDP44814.1;Name=PDP44814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12741.5;locus_tag=CLI86_01525;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP44814.1;transl_table=11 NSLJ01000003.1 Genbank gene 18636 21656 . - . ID=gene-CLI86_01530;Name=CLI86_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01530 NSLJ01000003.1 Protein Homology CDS 18636 21656 . - 0 ID=cds-PDP44815.1;Parent=gene-CLI86_01530;Dbxref=NCBI_GP:PDP44815.1;Name=PDP44815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_01530;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44815.1;transl_table=11 NSLJ01000003.1 Genbank gene 22117 23442 . + . ID=gene-CLI86_01535;Name=CLI86_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01535 NSLJ01000003.1 Protein Homology CDS 22117 23442 . + 0 ID=cds-PDP44816.1;Parent=gene-CLI86_01535;Dbxref=NCBI_GP:PDP44816.1;Name=PDP44816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772892.1;locus_tag=CLI86_01535;product=dehydrogenase;protein_id=PDP44816.1;transl_table=11 NSLJ01000003.1 Genbank gene 23454 24386 . - . ID=gene-CLI86_01540;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CLI86_01540 NSLJ01000003.1 Protein Homology CDS 23454 24386 . - 0 ID=cds-PDP44817.1;Parent=gene-CLI86_01540;Dbxref=NCBI_GP:PDP44817.1;Name=PDP44817.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005657662.1;locus_tag=CLI86_01540;product=ribosome small subunit-dependent GTPase A;protein_id=PDP44817.1;transl_table=11 NSLJ01000003.1 Genbank gene 24386 24949 . - . ID=gene-CLI86_01545;Name=CLI86_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01545 NSLJ01000003.1 Protein Homology CDS 24386 24949 . - 0 ID=cds-PDP44818.1;Parent=gene-CLI86_01545;Dbxref=NCBI_GP:PDP44818.1;Name=PDP44818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798670.1;locus_tag=CLI86_01545;product=ribosome-recycling factor;protein_id=PDP44818.1;transl_table=11 NSLJ01000003.1 Genbank gene 25249 25848 . - . ID=gene-CLI86_01550;Name=CLI86_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01550 NSLJ01000003.1 Protein Homology CDS 25249 25848 . - 0 ID=cds-PDP44819.1;Parent=gene-CLI86_01550;Dbxref=NCBI_GP:PDP44819.1;Name=PDP44819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362946.1;locus_tag=CLI86_01550;product=glutathione peroxidase;protein_id=PDP44819.1;transl_table=11 NSLJ01000003.1 Genbank gene 26105 31324 . - . ID=gene-CLI86_01555;Name=CLI86_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01555 NSLJ01000003.1 GeneMarkS+ CDS 26105 31324 . - 0 ID=cds-PDP44820.1;Parent=gene-CLI86_01555;Dbxref=NCBI_GP:PDP44820.1;Name=PDP44820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01555;product=hypothetical protein;protein_id=PDP44820.1;transl_table=11 NSLJ01000003.1 Genbank gene 31876 32805 . - . ID=gene-CLI86_01560;Name=CLI86_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01560 NSLJ01000003.1 Protein Homology CDS 31876 32805 . - 0 ID=cds-PDP44821.1;Parent=gene-CLI86_01560;Dbxref=NCBI_GP:PDP44821.1;Name=PDP44821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224702.1;locus_tag=CLI86_01560;product=hypothetical protein;protein_id=PDP44821.1;transl_table=11 NSLJ01000003.1 Genbank gene 32888 33796 . - . ID=gene-CLI86_01565;Name=CLI86_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01565 NSLJ01000003.1 Protein Homology CDS 32888 33796 . - 0 ID=cds-PDP44822.1;Parent=gene-CLI86_01565;Dbxref=NCBI_GP:PDP44822.1;Name=PDP44822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156316.1;locus_tag=CLI86_01565;product=DUF3108 domain-containing protein;protein_id=PDP44822.1;transl_table=11 NSLJ01000003.1 Genbank gene 33711 35624 . - . ID=gene-CLI86_01570;Name=CLI86_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01570 NSLJ01000003.1 Protein Homology CDS 33711 35624 . - 0 ID=cds-PDP44823.1;Parent=gene-CLI86_01570;Dbxref=NCBI_GP:PDP44823.1;Name=PDP44823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224700.1;locus_tag=CLI86_01570;product=hypothetical protein;protein_id=PDP44823.1;transl_table=11 NSLJ01000003.1 Genbank gene 35693 36967 . - . ID=gene-CLI86_01575;Name=CLI86_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01575 NSLJ01000003.1 Protein Homology CDS 35693 36967 . - 0 ID=cds-PDP44824.1;Parent=gene-CLI86_01575;Dbxref=NCBI_GP:PDP44824.1;Name=PDP44824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224699.1;locus_tag=CLI86_01575;product=DUF2851 domain-containing protein;protein_id=PDP44824.1;transl_table=11 NSLJ01000003.1 Genbank gene 37079 37810 . + . ID=gene-CLI86_01580;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CLI86_01580 NSLJ01000003.1 Protein Homology CDS 37079 37810 . + 0 ID=cds-PDP44825.1;Parent=gene-CLI86_01580;Dbxref=NCBI_GP:PDP44825.1;Name=PDP44825.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224698.1;locus_tag=CLI86_01580;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=PDP44825.1;transl_table=11 NSLJ01000003.1 Genbank gene 37827 39236 . + . ID=gene-CLI86_01585;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_01585 NSLJ01000003.1 Protein Homology CDS 37827 39236 . + 0 ID=cds-PDP44826.1;Parent=gene-CLI86_01585;Dbxref=NCBI_GP:PDP44826.1;Name=PDP44826.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011967028.1;locus_tag=CLI86_01585;product=signal peptidase I;protein_id=PDP44826.1;transl_table=11 NSLJ01000003.1 Genbank gene 39260 40102 . + . ID=gene-CLI86_01590;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_01590 NSLJ01000003.1 Protein Homology CDS 39260 40102 . + 0 ID=cds-PDP44827.1;Parent=gene-CLI86_01590;Dbxref=NCBI_GP:PDP44827.1;Name=PDP44827.1;gbkey=CDS;gene=lepB;inference=COORDINATES: protein motif:HMM:TIGR02227;locus_tag=CLI86_01590;product=signal peptidase I;protein_id=PDP44827.1;transl_table=11 NSLJ01000003.1 Genbank gene 40106 40723 . + . ID=gene-CLI86_01595;Name=CLI86_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01595 NSLJ01000003.1 Protein Homology CDS 40106 40723 . + 0 ID=cds-PDP44828.1;Parent=gene-CLI86_01595;Dbxref=NCBI_GP:PDP44828.1;Name=PDP44828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224695.1;locus_tag=CLI86_01595;product=hypothetical protein;protein_id=PDP44828.1;transl_table=11 NSLJ01000003.1 Genbank gene 40761 41873 . - . ID=gene-CLI86_01600;Name=CLI86_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01600 NSLJ01000003.1 Protein Homology CDS 40761 41873 . - 0 ID=cds-PDP44829.1;Parent=gene-CLI86_01600;Dbxref=NCBI_GP:PDP44829.1;Name=PDP44829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005633373.1;locus_tag=CLI86_01600;product=gliding motility protein GldN;protein_id=PDP44829.1;transl_table=11 NSLJ01000003.1 Genbank gene 41904 43469 . - . ID=gene-CLI86_01605;Name=CLI86_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01605 NSLJ01000003.1 Protein Homology CDS 41904 43469 . - 0 ID=cds-PDP44830.1;Parent=gene-CLI86_01605;Dbxref=NCBI_GP:PDP44830.1;Name=PDP44830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224693.1;locus_tag=CLI86_01605;product=gliding motility protein GldM;protein_id=PDP44830.1;transl_table=11 NSLJ01000003.1 Genbank gene 43521 44609 . - . ID=gene-CLI86_01610;Name=CLI86_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01610 NSLJ01000003.1 Protein Homology CDS 43521 44609 . - 0 ID=cds-PDP44831.1;Parent=gene-CLI86_01610;Dbxref=NCBI_GP:PDP44831.1;Name=PDP44831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224692.1;locus_tag=CLI86_01610;product=gliding motility protein GldL;protein_id=PDP44831.1;transl_table=11 NSLJ01000003.1 Genbank gene 44642 46081 . - . ID=gene-CLI86_01615;Name=CLI86_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01615 NSLJ01000003.1 Protein Homology CDS 44642 46081 . - 0 ID=cds-PDP44902.1;Parent=gene-CLI86_01615;Dbxref=NCBI_GP:PDP44902.1;Name=PDP44902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005633367.1;locus_tag=CLI86_01615;product=gliding motility-associated lipoprotein GldK;protein_id=PDP44902.1;transl_table=11 NSLJ01000003.1 Genbank gene 46115 47107 . - . ID=gene-CLI86_01620;Name=CLI86_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01620 NSLJ01000003.1 Protein Homology CDS 46115 47107 . - 0 ID=cds-PDP44832.1;Parent=gene-CLI86_01620;Dbxref=NCBI_GP:PDP44832.1;Name=PDP44832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03519;locus_tag=CLI86_01620;product=hypothetical protein;protein_id=PDP44832.1;transl_table=11 NSLJ01000003.1 Genbank gene 47211 47432 . - . ID=gene-CLI86_01625;Name=CLI86_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01625 NSLJ01000003.1 Protein Homology CDS 47211 47432 . - 0 ID=cds-PDP44833.1;Parent=gene-CLI86_01625;Dbxref=NCBI_GP:PDP44833.1;Name=PDP44833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538324.1;locus_tag=CLI86_01625;product=DUF2795 domain-containing protein;protein_id=PDP44833.1;transl_table=11 NSLJ01000003.1 Genbank gene 47516 48079 . - . ID=gene-CLI86_01630;Name=CLI86_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01630 NSLJ01000003.1 Protein Homology CDS 47516 48079 . - 0 ID=cds-PDP44834.1;Parent=gene-CLI86_01630;Dbxref=NCBI_GP:PDP44834.1;Name=PDP44834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224688.1;locus_tag=CLI86_01630;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP44834.1;transl_table=11 NSLJ01000003.1 Genbank gene 48085 49047 . - . ID=gene-CLI86_01635;Name=CLI86_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01635 NSLJ01000003.1 Protein Homology CDS 48085 49047 . - 0 ID=cds-PDP44835.1;Parent=gene-CLI86_01635;Dbxref=NCBI_GP:PDP44835.1;Name=PDP44835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13905.4;locus_tag=CLI86_01635;product=hypothetical protein;protein_id=PDP44835.1;transl_table=11 NSLJ01000003.1 Genbank gene 49213 49602 . - . ID=gene-CLI86_01640;Name=CLI86_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01640 NSLJ01000003.1 GeneMarkS+ CDS 49213 49602 . - 0 ID=cds-PDP44836.1;Parent=gene-CLI86_01640;Dbxref=NCBI_GP:PDP44836.1;Name=PDP44836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01640;product=hypothetical protein;protein_id=PDP44836.1;transl_table=11 NSLJ01000003.1 Genbank gene 49638 55130 . + . ID=gene-CLI86_01645;Name=CLI86_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01645 NSLJ01000003.1 GeneMarkS+ CDS 49638 55130 . + 0 ID=cds-PDP44837.1;Parent=gene-CLI86_01645;Dbxref=NCBI_GP:PDP44837.1;Name=PDP44837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01645;product=hypothetical protein;protein_id=PDP44837.1;transl_table=11 NSLJ01000003.1 Genbank gene 55270 55527 . - . ID=gene-CLI86_01650;Name=CLI86_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01650 NSLJ01000003.1 Protein Homology CDS 55270 55527 . - 0 ID=cds-PDP44838.1;Parent=gene-CLI86_01650;Dbxref=NCBI_GP:PDP44838.1;Name=PDP44838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002674344.1;locus_tag=CLI86_01650;product=acyl carrier protein;protein_id=PDP44838.1;transl_table=11 NSLJ01000003.1 Genbank gene 55546 56178 . - . ID=gene-CLI86_01655;Name=CLI86_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01655 NSLJ01000003.1 GeneMarkS+ CDS 55546 56178 . - 0 ID=cds-PDP44839.1;Parent=gene-CLI86_01655;Dbxref=NCBI_GP:PDP44839.1;Name=PDP44839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01655;product=3-oxoacyl-ACP synthase;protein_id=PDP44839.1;transl_table=11 NSLJ01000003.1 Genbank gene 56191 57363 . - . ID=gene-CLI86_01660;Name=CLI86_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01660 NSLJ01000003.1 Protein Homology CDS 56191 57363 . - 0 ID=cds-PDP44840.1;Parent=gene-CLI86_01660;Dbxref=NCBI_GP:PDP44840.1;Name=PDP44840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345765.1;locus_tag=CLI86_01660;product=beta-ketoacyl synthase;protein_id=PDP44840.1;transl_table=11 NSLJ01000003.1 Genbank gene 57360 57785 . - . ID=gene-CLI86_01665;Name=CLI86_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01665 NSLJ01000003.1 Protein Homology CDS 57360 57785 . - 0 ID=cds-PDP44841.1;Parent=gene-CLI86_01665;Dbxref=NCBI_GP:PDP44841.1;Name=PDP44841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378540.1;locus_tag=CLI86_01665;product=4-hydroxybenzoyl-CoA thioesterase;protein_id=PDP44841.1;transl_table=11 NSLJ01000003.1 Genbank gene 57814 58251 . - . ID=gene-CLI86_01670;Name=CLI86_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01670 NSLJ01000003.1 GeneMarkS+ CDS 57814 58251 . - 0 ID=cds-PDP44842.1;Parent=gene-CLI86_01670;Dbxref=NCBI_GP:PDP44842.1;Name=PDP44842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01670;product=pseudouridylate synthase;protein_id=PDP44842.1;transl_table=11 NSLJ01000003.1 Genbank gene 58273 59358 . - . ID=gene-CLI86_01675;Name=CLI86_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01675 NSLJ01000003.1 Protein Homology CDS 58273 59358 . - 0 ID=cds-PDP44843.1;Parent=gene-CLI86_01675;Dbxref=NCBI_GP:PDP44843.1;Name=PDP44843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009424972.1;locus_tag=CLI86_01675;product=SAM-dependent methyltransferase;protein_id=PDP44843.1;transl_table=11 NSLJ01000003.1 Genbank gene 59336 60244 . - . ID=gene-CLI86_01680;Name=CLI86_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01680 NSLJ01000003.1 Protein Homology CDS 59336 60244 . - 0 ID=cds-PDP44844.1;Parent=gene-CLI86_01680;Dbxref=NCBI_GP:PDP44844.1;Name=PDP44844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224679.1;locus_tag=CLI86_01680;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=PDP44844.1;transl_table=11 NSLJ01000003.1 Genbank gene 60246 60491 . - . ID=gene-CLI86_01685;Name=CLI86_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01685 NSLJ01000003.1 Protein Homology CDS 60246 60491 . - 0 ID=cds-PDP44845.1;Parent=gene-CLI86_01685;Dbxref=NCBI_GP:PDP44845.1;Name=PDP44845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224678.1;locus_tag=CLI86_01685;product=acyl carrier protein;protein_id=PDP44845.1;transl_table=11 NSLJ01000003.1 Genbank gene 60575 61300 . - . ID=gene-CLI86_01690;Name=CLI86_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01690 NSLJ01000003.1 Protein Homology CDS 60575 61300 . - 0 ID=cds-PDP44846.1;Parent=gene-CLI86_01690;Dbxref=NCBI_GP:PDP44846.1;Name=PDP44846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920766.1;locus_tag=CLI86_01690;product=3-oxoacyl-ACP reductase FabG;protein_id=PDP44846.1;transl_table=11 NSLJ01000003.1 Genbank gene 61420 62892 . + . ID=gene-CLI86_01695;Name=CLI86_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01695 NSLJ01000003.1 Protein Homology CDS 61420 62892 . + 0 ID=cds-PDP44903.1;Parent=gene-CLI86_01695;Dbxref=NCBI_GP:PDP44903.1;Name=PDP44903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007567421.1;locus_tag=CLI86_01695;product=cysteine--tRNA ligase;protein_id=PDP44903.1;transl_table=11 NSLJ01000003.1 Genbank gene 62999 64849 . - . ID=gene-CLI86_01700;Name=CLI86_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01700 NSLJ01000003.1 Protein Homology CDS 62999 64849 . - 0 ID=cds-PDP44847.1;Parent=gene-CLI86_01700;Dbxref=NCBI_GP:PDP44847.1;Name=PDP44847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224675.1;locus_tag=CLI86_01700;product=alpha-1%2C3-galactosidase B;protein_id=PDP44847.1;transl_table=11 NSLJ01000003.1 Genbank gene 65090 69166 . + . ID=gene-CLI86_01705;Name=CLI86_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01705 NSLJ01000003.1 Protein Homology CDS 65090 69166 . + 0 ID=cds-PDP44848.1;Parent=gene-CLI86_01705;Dbxref=NCBI_GP:PDP44848.1;Name=PDP44848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224673.1;locus_tag=CLI86_01705;product=histidine kinase;protein_id=PDP44848.1;transl_table=11 NSLJ01000003.1 Genbank gene 69219 70436 . + . ID=gene-CLI86_01710;Name=CLI86_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01710 NSLJ01000003.1 Protein Homology CDS 69219 70436 . + 0 ID=cds-PDP44904.1;Parent=gene-CLI86_01710;Dbxref=NCBI_GP:PDP44904.1;Name=PDP44904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779359.1;locus_tag=CLI86_01710;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=PDP44904.1;transl_table=11 NSLJ01000003.1 Genbank gene 70446 72464 . + . ID=gene-CLI86_01715;Name=CLI86_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01715 NSLJ01000003.1 Protein Homology CDS 70446 72464 . + 0 ID=cds-PDP44849.1;Parent=gene-CLI86_01715;Dbxref=NCBI_GP:PDP44849.1;Name=PDP44849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224671.1;locus_tag=CLI86_01715;product=hypothetical protein;protein_id=PDP44849.1;transl_table=11 NSLJ01000003.1 Genbank pseudogene 72597 73532 . + . ID=gene-CLI86_01720;Name=CLI86_01720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01720;pseudo=true NSLJ01000003.1 Protein Homology CDS 72597 73532 . + 0 ID=cds-CLI86_01720;Parent=gene-CLI86_01720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_01720;product=IS1595 family transposase;pseudo=true;transl_table=11 NSLJ01000003.1 Genbank gene 73598 73798 . + . ID=gene-CLI86_01725;Name=CLI86_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01725 NSLJ01000003.1 GeneMarkS+ CDS 73598 73798 . + 0 ID=cds-PDP44850.1;Parent=gene-CLI86_01725;Dbxref=NCBI_GP:PDP44850.1;Name=PDP44850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01725;product=hypothetical protein;protein_id=PDP44850.1;transl_table=11 NSLJ01000003.1 Genbank gene 73795 75144 . - . ID=gene-CLI86_01730;Name=CLI86_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01730 NSLJ01000003.1 Protein Homology CDS 73795 75144 . - 0 ID=cds-PDP44905.1;Parent=gene-CLI86_01730;Dbxref=NCBI_GP:PDP44905.1;Name=PDP44905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224668.1;locus_tag=CLI86_01730;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44905.1;transl_table=11 NSLJ01000003.1 Genbank gene 75158 78493 . - . ID=gene-CLI86_01735;Name=CLI86_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01735 NSLJ01000003.1 Protein Homology CDS 75158 78493 . - 0 ID=cds-PDP44851.1;Parent=gene-CLI86_01735;Dbxref=NCBI_GP:PDP44851.1;Name=PDP44851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224667.1;locus_tag=CLI86_01735;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44851.1;transl_table=11 NSLJ01000003.1 Genbank gene 78530 81160 . - . ID=gene-CLI86_01740;Name=CLI86_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01740 NSLJ01000003.1 Protein Homology CDS 78530 81160 . - 0 ID=cds-PDP44852.1;Parent=gene-CLI86_01740;Dbxref=NCBI_GP:PDP44852.1;Name=PDP44852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224666.1;locus_tag=CLI86_01740;product=peptidase M10A/M12B;protein_id=PDP44852.1;transl_table=11 NSLJ01000003.1 Genbank gene 82186 82548 . - . ID=gene-CLI86_01745;Name=CLI86_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01745 NSLJ01000003.1 GeneMarkS+ CDS 82186 82548 . - 0 ID=cds-PDP44853.1;Parent=gene-CLI86_01745;Dbxref=NCBI_GP:PDP44853.1;Name=PDP44853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01745;product=hypothetical protein;protein_id=PDP44853.1;transl_table=11 NSLJ01000003.1 Genbank gene 82560 82958 . - . ID=gene-CLI86_01750;Name=CLI86_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01750 NSLJ01000003.1 Protein Homology CDS 82560 82958 . - 0 ID=cds-PDP44854.1;Parent=gene-CLI86_01750;Dbxref=NCBI_GP:PDP44854.1;Name=PDP44854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_01750;product=hypothetical protein;protein_id=PDP44854.1;transl_table=11 NSLJ01000003.1 Genbank gene 83147 83623 . - . ID=gene-CLI86_01755;Name=CLI86_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01755 NSLJ01000003.1 GeneMarkS+ CDS 83147 83623 . - 0 ID=cds-PDP44855.1;Parent=gene-CLI86_01755;Dbxref=NCBI_GP:PDP44855.1;Name=PDP44855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01755;product=hypothetical protein;protein_id=PDP44855.1;transl_table=11 NSLJ01000003.1 Genbank gene 83781 83954 . - . ID=gene-CLI86_01760;Name=CLI86_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01760 NSLJ01000003.1 Protein Homology CDS 83781 83954 . - 0 ID=cds-PDP44856.1;Parent=gene-CLI86_01760;Dbxref=NCBI_GP:PDP44856.1;Name=PDP44856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03949;locus_tag=CLI86_01760;product=hypothetical protein;protein_id=PDP44856.1;transl_table=11 NSLJ01000003.1 Genbank gene 84022 84405 . - . ID=gene-CLI86_01765;Name=CLI86_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01765 NSLJ01000003.1 GeneMarkS+ CDS 84022 84405 . - 0 ID=cds-PDP44857.1;Parent=gene-CLI86_01765;Dbxref=NCBI_GP:PDP44857.1;Name=PDP44857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01765;product=DNA-binding protein;protein_id=PDP44857.1;transl_table=11 NSLJ01000003.1 Genbank gene 84383 85690 . - . ID=gene-CLI86_01770;Name=CLI86_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01770 NSLJ01000003.1 Protein Homology CDS 84383 85690 . - 0 ID=cds-PDP44858.1;Parent=gene-CLI86_01770;Dbxref=NCBI_GP:PDP44858.1;Name=PDP44858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02321.16;locus_tag=CLI86_01770;product=hypothetical protein;protein_id=PDP44858.1;transl_table=11 NSLJ01000003.1 Genbank gene 85687 87846 . - . ID=gene-CLI86_01775;Name=CLI86_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01775 NSLJ01000003.1 Protein Homology CDS 85687 87846 . - 0 ID=cds-PDP44859.1;Parent=gene-CLI86_01775;Dbxref=NCBI_GP:PDP44859.1;Name=PDP44859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224656.1;locus_tag=CLI86_01775;product=peptidase C39;protein_id=PDP44859.1;transl_table=11 NSLJ01000003.1 Genbank gene 87861 89018 . - . ID=gene-CLI86_01780;Name=CLI86_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01780 NSLJ01000003.1 Protein Homology CDS 87861 89018 . - 0 ID=cds-PDP44860.1;Parent=gene-CLI86_01780;Dbxref=NCBI_GP:PDP44860.1;Name=PDP44860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224655.1;locus_tag=CLI86_01780;product=HlyD family secretion protein;protein_id=PDP44860.1;transl_table=11 NSLJ01000003.1 Genbank gene 89267 89455 . - . ID=gene-CLI86_01785;Name=CLI86_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01785 NSLJ01000003.1 GeneMarkS+ CDS 89267 89455 . - 0 ID=cds-PDP44861.1;Parent=gene-CLI86_01785;Dbxref=NCBI_GP:PDP44861.1;Name=PDP44861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01785;product=hypothetical protein;protein_id=PDP44861.1;transl_table=11 NSLJ01000003.1 Genbank gene 89475 89684 . - . ID=gene-CLI86_01790;Name=CLI86_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01790 NSLJ01000003.1 Protein Homology CDS 89475 89684 . - 0 ID=cds-PDP44862.1;Parent=gene-CLI86_01790;Dbxref=NCBI_GP:PDP44862.1;Name=PDP44862.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13396.4;locus_tag=CLI86_01790;product=hypothetical protein;protein_id=PDP44862.1;transl_table=11 NSLJ01000003.1 Genbank gene 90675 90860 . - . ID=gene-CLI86_01795;Name=CLI86_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01795 NSLJ01000003.1 GeneMarkS+ CDS 90675 90860 . - 0 ID=cds-PDP44863.1;Parent=gene-CLI86_01795;Dbxref=NCBI_GP:PDP44863.1;Name=PDP44863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01795;product=hypothetical protein;protein_id=PDP44863.1;transl_table=11 NSLJ01000003.1 Genbank gene 91340 91522 . - . ID=gene-CLI86_01800;Name=CLI86_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01800 NSLJ01000003.1 GeneMarkS+ CDS 91340 91522 . - 0 ID=cds-PDP44864.1;Parent=gene-CLI86_01800;Dbxref=NCBI_GP:PDP44864.1;Name=PDP44864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01800;product=hypothetical protein;protein_id=PDP44864.1;transl_table=11 NSLJ01000003.1 Genbank gene 91698 93044 . + . ID=gene-CLI86_01805;Name=CLI86_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01805 NSLJ01000003.1 Protein Homology CDS 91698 93044 . + 0 ID=cds-PDP44865.1;Parent=gene-CLI86_01805;Dbxref=NCBI_GP:PDP44865.1;Name=PDP44865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00512.23;locus_tag=CLI86_01805;product=two-component sensor histidine kinase;protein_id=PDP44865.1;transl_table=11 NSLJ01000003.1 Genbank gene 93037 93726 . + . ID=gene-CLI86_01810;Name=CLI86_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01810 NSLJ01000003.1 Protein Homology CDS 93037 93726 . + 0 ID=cds-PDP44866.1;Parent=gene-CLI86_01810;Dbxref=NCBI_GP:PDP44866.1;Name=PDP44866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224626.1;locus_tag=CLI86_01810;product=DNA-binding response regulator;protein_id=PDP44866.1;transl_table=11 NSLJ01000003.1 Genbank gene 93800 93997 . + . ID=gene-CLI86_01815;Name=CLI86_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01815 NSLJ01000003.1 GeneMarkS+ CDS 93800 93997 . + 0 ID=cds-PDP44867.1;Parent=gene-CLI86_01815;Dbxref=NCBI_GP:PDP44867.1;Name=PDP44867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01815;product=hypothetical protein;protein_id=PDP44867.1;transl_table=11 NSLJ01000003.1 Genbank gene 94021 95661 . + . ID=gene-CLI86_01820;Name=CLI86_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01820 NSLJ01000003.1 Protein Homology CDS 94021 95661 . + 0 ID=cds-PDP44868.1;Parent=gene-CLI86_01820;Dbxref=NCBI_GP:PDP44868.1;Name=PDP44868.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224624.1;locus_tag=CLI86_01820;product=fumarate hydratase;protein_id=PDP44868.1;transl_table=11 NSLJ01000003.1 Genbank gene 95746 96387 . + . ID=gene-CLI86_01825;Name=CLI86_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01825 NSLJ01000003.1 Protein Homology CDS 95746 96387 . + 0 ID=cds-PDP44906.1;Parent=gene-CLI86_01825;Dbxref=NCBI_GP:PDP44906.1;Name=PDP44906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634140.1;locus_tag=CLI86_01825;product=hypothetical protein;protein_id=PDP44906.1;transl_table=11 NSLJ01000003.1 Genbank gene 96398 96988 . - . ID=gene-CLI86_01830;Name=CLI86_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01830 NSLJ01000003.1 Protein Homology CDS 96398 96988 . - 0 ID=cds-PDP44869.1;Parent=gene-CLI86_01830;Dbxref=NCBI_GP:PDP44869.1;Name=PDP44869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00254.26;locus_tag=CLI86_01830;product=hypothetical protein;protein_id=PDP44869.1;transl_table=11 NSLJ01000003.1 Genbank gene 97022 98566 . - . ID=gene-CLI86_01835;Name=CLI86_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01835 NSLJ01000003.1 Protein Homology CDS 97022 98566 . - 0 ID=cds-PDP44870.1;Parent=gene-CLI86_01835;Dbxref=NCBI_GP:PDP44870.1;Name=PDP44870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224621.1;locus_tag=CLI86_01835;product=glycine--tRNA ligase;protein_id=PDP44870.1;transl_table=11 NSLJ01000003.1 Genbank gene 98648 99493 . - . ID=gene-CLI86_01840;Name=CLI86_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01840 NSLJ01000003.1 Protein Homology CDS 98648 99493 . - 0 ID=cds-PDP44871.1;Parent=gene-CLI86_01840;Dbxref=NCBI_GP:PDP44871.1;Name=PDP44871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224620.1;locus_tag=CLI86_01840;product=hypothetical protein;protein_id=PDP44871.1;transl_table=11 NSLJ01000003.1 Genbank gene 99526 99777 . + . ID=gene-CLI86_01845;Name=CLI86_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01845 NSLJ01000003.1 GeneMarkS+ CDS 99526 99777 . + 0 ID=cds-PDP44872.1;Parent=gene-CLI86_01845;Dbxref=NCBI_GP:PDP44872.1;Name=PDP44872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01845;product=hypothetical protein;protein_id=PDP44872.1;transl_table=11 NSLJ01000003.1 Genbank gene 99977 101539 . + . ID=gene-CLI86_01850;Name=CLI86_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01850 NSLJ01000003.1 Protein Homology CDS 99977 101539 . + 0 ID=cds-PDP44873.1;Parent=gene-CLI86_01850;Dbxref=NCBI_GP:PDP44873.1;Name=PDP44873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858711.1;locus_tag=CLI86_01850;product=hypothetical protein;protein_id=PDP44873.1;transl_table=11 NSLJ01000003.1 Genbank gene 101581 102981 . + . ID=gene-CLI86_01855;Name=CLI86_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01855 NSLJ01000003.1 Protein Homology CDS 101581 102981 . + 0 ID=cds-PDP44874.1;Parent=gene-CLI86_01855;Dbxref=NCBI_GP:PDP44874.1;Name=PDP44874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224616.1;locus_tag=CLI86_01855;product=oxidoreductase;protein_id=PDP44874.1;transl_table=11 NSLJ01000003.1 Genbank gene 102978 103919 . + . ID=gene-CLI86_01860;Name=CLI86_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01860 NSLJ01000003.1 Protein Homology CDS 102978 103919 . + 0 ID=cds-PDP44875.1;Parent=gene-CLI86_01860;Dbxref=NCBI_GP:PDP44875.1;Name=PDP44875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640742.1;locus_tag=CLI86_01860;product=sugar phosphate isomerase;protein_id=PDP44875.1;transl_table=11 NSLJ01000003.1 Genbank gene 103984 104835 . + . ID=gene-CLI86_01865;Name=CLI86_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01865 NSLJ01000003.1 Protein Homology CDS 103984 104835 . + 0 ID=cds-PDP44876.1;Parent=gene-CLI86_01865;Dbxref=NCBI_GP:PDP44876.1;Name=PDP44876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224614.1;locus_tag=CLI86_01865;product=helix-turn-helix transcriptional regulator;protein_id=PDP44876.1;transl_table=11 NSLJ01000003.1 Genbank gene 104845 105024 . + . ID=gene-CLI86_01870;Name=CLI86_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01870 NSLJ01000003.1 Protein Homology CDS 104845 105024 . + 0 ID=cds-PDP44877.1;Parent=gene-CLI86_01870;Dbxref=NCBI_GP:PDP44877.1;Name=PDP44877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224613.1;locus_tag=CLI86_01870;product=hypothetical protein;protein_id=PDP44877.1;transl_table=11 NSLJ01000003.1 Genbank gene 105665 105928 . - . ID=gene-CLI86_01875;Name=CLI86_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01875 NSLJ01000003.1 GeneMarkS+ CDS 105665 105928 . - 0 ID=cds-PDP44878.1;Parent=gene-CLI86_01875;Dbxref=NCBI_GP:PDP44878.1;Name=PDP44878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01875;product=hypothetical protein;protein_id=PDP44878.1;transl_table=11 NSLJ01000003.1 Genbank gene 105995 109096 . + . ID=gene-CLI86_01880;Name=CLI86_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01880 NSLJ01000003.1 Protein Homology CDS 105995 109096 . + 0 ID=cds-PDP44879.1;Parent=gene-CLI86_01880;Dbxref=NCBI_GP:PDP44879.1;Name=PDP44879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008666988.1;locus_tag=CLI86_01880;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44879.1;transl_table=11 NSLJ01000003.1 Genbank gene 109121 110980 . + . ID=gene-CLI86_01885;Name=CLI86_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01885 NSLJ01000003.1 Protein Homology CDS 109121 110980 . + 0 ID=cds-PDP44880.1;Parent=gene-CLI86_01885;Dbxref=NCBI_GP:PDP44880.1;Name=PDP44880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224610.1;locus_tag=CLI86_01885;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44880.1;transl_table=11 NSLJ01000003.1 Genbank gene 111017 111484 . + . ID=gene-CLI86_01890;Name=CLI86_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01890 NSLJ01000003.1 Protein Homology CDS 111017 111484 . + 0 ID=cds-PDP44881.1;Parent=gene-CLI86_01890;Dbxref=NCBI_GP:PDP44881.1;Name=PDP44881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224609.1;locus_tag=CLI86_01890;product=hypothetical protein;protein_id=PDP44881.1;transl_table=11 NSLJ01000003.1 Genbank gene 111929 112153 . - . ID=gene-CLI86_01895;Name=CLI86_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01895 NSLJ01000003.1 GeneMarkS+ CDS 111929 112153 . - 0 ID=cds-PDP44882.1;Parent=gene-CLI86_01895;Dbxref=NCBI_GP:PDP44882.1;Name=PDP44882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01895;product=hypothetical protein;protein_id=PDP44882.1;transl_table=11 NSLJ01000003.1 Genbank gene 112310 115447 . + . ID=gene-CLI86_01900;Name=CLI86_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01900 NSLJ01000003.1 Protein Homology CDS 112310 115447 . + 0 ID=cds-PDP44907.1;Parent=gene-CLI86_01900;Dbxref=NCBI_GP:PDP44907.1;Name=PDP44907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224606.1;locus_tag=CLI86_01900;product=SusC/RagA family protein;protein_id=PDP44907.1;transl_table=11 NSLJ01000003.1 Genbank gene 115469 117487 . + . ID=gene-CLI86_01905;Name=CLI86_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01905 NSLJ01000003.1 Protein Homology CDS 115469 117487 . + 0 ID=cds-PDP44883.1;Parent=gene-CLI86_01905;Dbxref=NCBI_GP:PDP44883.1;Name=PDP44883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224605.1;locus_tag=CLI86_01905;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44883.1;transl_table=11 NSLJ01000003.1 Genbank gene 117574 117945 . + . ID=gene-CLI86_01910;Name=CLI86_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01910 NSLJ01000003.1 GeneMarkS+ CDS 117574 117945 . + 0 ID=cds-PDP44884.1;Parent=gene-CLI86_01910;Dbxref=NCBI_GP:PDP44884.1;Name=PDP44884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01910;product=hypothetical protein;protein_id=PDP44884.1;transl_table=11 NSLJ01000003.1 Genbank gene 118310 118867 . + . ID=gene-CLI86_01915;Name=CLI86_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01915 NSLJ01000003.1 GeneMarkS+ CDS 118310 118867 . + 0 ID=cds-PDP44885.1;Parent=gene-CLI86_01915;Dbxref=NCBI_GP:PDP44885.1;Name=PDP44885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01915;product=hypothetical protein;protein_id=PDP44885.1;transl_table=11 NSLJ01000003.1 Genbank gene 119072 120424 . - . ID=gene-CLI86_01920;Name=CLI86_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01920 NSLJ01000003.1 Protein Homology CDS 119072 120424 . - 0 ID=cds-PDP44886.1;Parent=gene-CLI86_01920;Dbxref=NCBI_GP:PDP44886.1;Name=PDP44886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224603.1;locus_tag=CLI86_01920;product=beta-glucosidase;protein_id=PDP44886.1;transl_table=11 NSLJ01000003.1 Genbank gene 120421 121227 . - . ID=gene-CLI86_01925;Name=CLI86_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01925 NSLJ01000003.1 Protein Homology CDS 120421 121227 . - 0 ID=cds-PDP44887.1;Parent=gene-CLI86_01925;Dbxref=NCBI_GP:PDP44887.1;Name=PDP44887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224602.1;locus_tag=CLI86_01925;product=phospholipase;protein_id=PDP44887.1;transl_table=11 NSLJ01000003.1 Genbank gene 121236 122153 . - . ID=gene-CLI86_01930;Name=CLI86_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01930 NSLJ01000003.1 Protein Homology CDS 121236 122153 . - 0 ID=cds-PDP44888.1;Parent=gene-CLI86_01930;Dbxref=NCBI_GP:PDP44888.1;Name=PDP44888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13385.4;locus_tag=CLI86_01930;product=hypothetical protein;protein_id=PDP44888.1;transl_table=11 NSLJ01000003.1 Genbank gene 122047 123588 . - . ID=gene-CLI86_01935;Name=CLI86_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01935 NSLJ01000003.1 Protein Homology CDS 122047 123588 . - 0 ID=cds-PDP44889.1;Parent=gene-CLI86_01935;Dbxref=NCBI_GP:PDP44889.1;Name=PDP44889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002677979.1;locus_tag=CLI86_01935;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44889.1;transl_table=11 NSLJ01000003.1 Genbank gene 123600 126617 . - . ID=gene-CLI86_01940;Name=CLI86_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01940 NSLJ01000003.1 Protein Homology CDS 123600 126617 . - 0 ID=cds-PDP44890.1;Parent=gene-CLI86_01940;Dbxref=NCBI_GP:PDP44890.1;Name=PDP44890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009422269.1;locus_tag=CLI86_01940;product=SusC/RagA family protein;protein_id=PDP44890.1;transl_table=11 NSLJ01000003.1 Genbank gene 126913 128301 . - . ID=gene-CLI86_01945;Name=CLI86_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01945 NSLJ01000003.1 Protein Homology CDS 126913 128301 . - 0 ID=cds-PDP44908.1;Parent=gene-CLI86_01945;Dbxref=NCBI_GP:PDP44908.1;Name=PDP44908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004570226.1;locus_tag=CLI86_01945;product=alpha/beta hydrolase;protein_id=PDP44908.1;transl_table=11 NSLJ01000003.1 Genbank gene 128336 128518 . - . ID=gene-CLI86_01950;Name=CLI86_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01950 NSLJ01000003.1 GeneMarkS+ CDS 128336 128518 . - 0 ID=cds-PDP44891.1;Parent=gene-CLI86_01950;Dbxref=NCBI_GP:PDP44891.1;Name=PDP44891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01950;product=hypothetical protein;protein_id=PDP44891.1;transl_table=11 NSLJ01000003.1 Genbank gene 128557 129006 . - . ID=gene-CLI86_01955;Name=CLI86_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01955 NSLJ01000003.1 Protein Homology CDS 128557 129006 . - 0 ID=cds-PDP44892.1;Parent=gene-CLI86_01955;Dbxref=NCBI_GP:PDP44892.1;Name=PDP44892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224595.1;locus_tag=CLI86_01955;product=DedA family protein;protein_id=PDP44892.1;transl_table=11 NSLJ01000003.1 Genbank gene 128994 130010 . - . ID=gene-CLI86_01960;Name=CLI86_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01960 NSLJ01000003.1 GeneMarkS+ CDS 128994 130010 . - 0 ID=cds-PDP44893.1;Parent=gene-CLI86_01960;Dbxref=NCBI_GP:PDP44893.1;Name=PDP44893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01960;product=hypothetical protein;protein_id=PDP44893.1;transl_table=11 NSLJ01000003.1 Genbank gene 130026 131300 . - . ID=gene-CLI86_01965;Name=CLI86_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01965 NSLJ01000003.1 Protein Homology CDS 130026 131300 . - 0 ID=cds-PDP44894.1;Parent=gene-CLI86_01965;Dbxref=NCBI_GP:PDP44894.1;Name=PDP44894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618237.1;locus_tag=CLI86_01965;product=phosphoribosylamine--glycine ligase;protein_id=PDP44894.1;transl_table=11 NSLJ01000003.1 Genbank gene 131588 132253 . - . ID=gene-CLI86_01970;Name=CLI86_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01970 NSLJ01000003.1 Protein Homology CDS 131588 132253 . - 0 ID=cds-PDP44895.1;Parent=gene-CLI86_01970;Dbxref=NCBI_GP:PDP44895.1;Name=PDP44895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224591.1;locus_tag=CLI86_01970;product=antibiotic resistance protein MarC;protein_id=PDP44895.1;transl_table=11 NSLJ01000003.1 Genbank gene 132308 134362 . - . ID=gene-CLI86_01975;Name=CLI86_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01975 NSLJ01000003.1 Protein Homology CDS 132308 134362 . - 0 ID=cds-PDP44896.1;Parent=gene-CLI86_01975;Dbxref=NCBI_GP:PDP44896.1;Name=PDP44896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224590.1;locus_tag=CLI86_01975;product=glycoside hydrolase;protein_id=PDP44896.1;transl_table=11 NSLJ01000003.1 Genbank gene 134774 135199 . + . ID=gene-CLI86_01980;Name=CLI86_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01980 NSLJ01000003.1 GeneMarkS+ CDS 134774 135199 . + 0 ID=cds-PDP44897.1;Parent=gene-CLI86_01980;Dbxref=NCBI_GP:PDP44897.1;Name=PDP44897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01980;product=hypothetical protein;protein_id=PDP44897.1;transl_table=11 NSLJ01000003.1 Genbank gene 135196 137442 . + . ID=gene-CLI86_01985;Name=CLI86_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01985 NSLJ01000003.1 Protein Homology CDS 135196 137442 . + 0 ID=cds-PDP44898.1;Parent=gene-CLI86_01985;Dbxref=NCBI_GP:PDP44898.1;Name=PDP44898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224587.1;locus_tag=CLI86_01985;product=hypothetical protein;protein_id=PDP44898.1;transl_table=11 ##sequence-region NSLJ01000040.1 1 26517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000040.1 Genbank region 1 26517 . + . ID=NSLJ01000040.1:1..26517;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000040.1 Genbank gene 1 572 . + . ID=gene-CLI86_11920;Name=CLI86_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11920;partial=true;start_range=.,1 NSLJ01000040.1 Protein Homology CDS 1 572 . + 2 ID=cds-PDP42711.1;Parent=gene-CLI86_11920;Dbxref=NCBI_GP:PDP42711.1;Name=PDP42711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_11920;partial=true;product=IS1595 family transposase;protein_id=PDP42711.1;start_range=.,1;transl_table=11 NSLJ01000040.1 Genbank gene 593 3547 . - . ID=gene-CLI86_11925;Name=CLI86_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11925 NSLJ01000040.1 Protein Homology CDS 593 3547 . - 0 ID=cds-PDP42712.1;Parent=gene-CLI86_11925;Dbxref=NCBI_GP:PDP42712.1;Name=PDP42712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225772.1;locus_tag=CLI86_11925;product=SusC/RagA family protein;protein_id=PDP42712.1;transl_table=11 NSLJ01000040.1 Genbank gene 3997 4308 . - . ID=gene-CLI86_11930;Name=CLI86_11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11930 NSLJ01000040.1 Protein Homology CDS 3997 4308 . - 0 ID=cds-PDP42713.1;Parent=gene-CLI86_11930;Dbxref=NCBI_GP:PDP42713.1;Name=PDP42713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225775.1;locus_tag=CLI86_11930;product=DUF4491 domain-containing protein;protein_id=PDP42713.1;transl_table=11 NSLJ01000040.1 Genbank gene 4323 6635 . - . ID=gene-CLI86_11935;Name=CLI86_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11935 NSLJ01000040.1 Protein Homology CDS 4323 6635 . - 0 ID=cds-PDP42714.1;Parent=gene-CLI86_11935;Dbxref=NCBI_GP:PDP42714.1;Name=PDP42714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012056203.1;locus_tag=CLI86_11935;product=TonB-dependent receptor;protein_id=PDP42714.1;transl_table=11 NSLJ01000040.1 Genbank gene 6950 8071 . - . ID=gene-CLI86_11940;Name=CLI86_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11940 NSLJ01000040.1 Protein Homology CDS 6950 8071 . - 0 ID=cds-PDP42715.1;Parent=gene-CLI86_11940;Dbxref=NCBI_GP:PDP42715.1;Name=PDP42715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07676.10;locus_tag=CLI86_11940;product=hypothetical protein;protein_id=PDP42715.1;transl_table=11 NSLJ01000040.1 Genbank gene 8473 9855 . - . ID=gene-CLI86_11945;Name=CLI86_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11945 NSLJ01000040.1 Protein Homology CDS 8473 9855 . - 0 ID=cds-PDP42727.1;Parent=gene-CLI86_11945;Dbxref=NCBI_GP:PDP42727.1;Name=PDP42727.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008862698.1;locus_tag=CLI86_11945;product=dihydroorotase;protein_id=PDP42727.1;transl_table=11 NSLJ01000040.1 Genbank gene 9849 10631 . - . ID=gene-CLI86_11950;Name=CLI86_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11950 NSLJ01000040.1 Protein Homology CDS 9849 10631 . - 0 ID=cds-PDP42716.1;Parent=gene-CLI86_11950;Dbxref=NCBI_GP:PDP42716.1;Name=PDP42716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225780.1;locus_tag=CLI86_11950;product=dolichyl-phosphate beta-D-mannosyltransferase;protein_id=PDP42716.1;transl_table=11 NSLJ01000040.1 Genbank gene 10754 12298 . - . ID=gene-CLI86_11955;Name=CLI86_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11955 NSLJ01000040.1 Protein Homology CDS 10754 12298 . - 0 ID=cds-PDP42717.1;Parent=gene-CLI86_11955;Dbxref=NCBI_GP:PDP42717.1;Name=PDP42717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225781.1;locus_tag=CLI86_11955;product=hypothetical protein;protein_id=PDP42717.1;transl_table=11 NSLJ01000040.1 Genbank gene 12342 13385 . - . ID=gene-CLI86_11960;Name=CLI86_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11960 NSLJ01000040.1 Protein Homology CDS 12342 13385 . - 0 ID=cds-PDP42718.1;Parent=gene-CLI86_11960;Dbxref=NCBI_GP:PDP42718.1;Name=PDP42718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225782.1;locus_tag=CLI86_11960;product=NAD-dependent dehydratase;protein_id=PDP42718.1;transl_table=11 NSLJ01000040.1 Genbank gene 13637 14329 . - . ID=gene-CLI86_11965;Name=CLI86_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11965 NSLJ01000040.1 Protein Homology CDS 13637 14329 . - 0 ID=cds-PDP42719.1;Parent=gene-CLI86_11965;Dbxref=NCBI_GP:PDP42719.1;Name=PDP42719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009275097.1;locus_tag=CLI86_11965;product=PorT family protein;protein_id=PDP42719.1;transl_table=11 NSLJ01000040.1 Genbank gene 14326 16116 . - . ID=gene-CLI86_11970;Name=CLI86_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11970 NSLJ01000040.1 Protein Homology CDS 14326 16116 . - 0 ID=cds-PDP42720.1;Parent=gene-CLI86_11970;Dbxref=NCBI_GP:PDP42720.1;Name=PDP42720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005862770.1;locus_tag=CLI86_11970;product=peptidoglycan-binding protein LysM;protein_id=PDP42720.1;transl_table=11 NSLJ01000040.1 Genbank gene 16266 17600 . + . ID=gene-CLI86_11975;Name=CLI86_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11975 NSLJ01000040.1 Protein Homology CDS 16266 17600 . + 0 ID=cds-PDP42721.1;Parent=gene-CLI86_11975;Dbxref=NCBI_GP:PDP42721.1;Name=PDP42721.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13585.4;locus_tag=CLI86_11975;product=T9SS C-terminal target domain-containing protein;protein_id=PDP42721.1;transl_table=11 NSLJ01000040.1 Genbank gene 17600 18574 . + . ID=gene-CLI86_11980;Name=CLI86_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11980 NSLJ01000040.1 Protein Homology CDS 17600 18574 . + 0 ID=cds-PDP42722.1;Parent=gene-CLI86_11980;Dbxref=NCBI_GP:PDP42722.1;Name=PDP42722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225787.1;locus_tag=CLI86_11980;product=lytic transglycosylase;protein_id=PDP42722.1;transl_table=11 NSLJ01000040.1 Genbank gene 18643 21480 . + . ID=gene-CLI86_11985;Name=CLI86_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11985 NSLJ01000040.1 Protein Homology CDS 18643 21480 . + 0 ID=cds-PDP42728.1;Parent=gene-CLI86_11985;Dbxref=NCBI_GP:PDP42728.1;Name=PDP42728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009319425.1;locus_tag=CLI86_11985;product=excinuclease ABC subunit UvrA;protein_id=PDP42728.1;transl_table=11 NSLJ01000040.1 Genbank gene 21485 21703 . + . ID=gene-CLI86_11990;Name=CLI86_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11990 NSLJ01000040.1 Protein Homology CDS 21485 21703 . + 0 ID=cds-PDP42723.1;Parent=gene-CLI86_11990;Dbxref=NCBI_GP:PDP42723.1;Name=PDP42723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658121.1;locus_tag=CLI86_11990;product=hypothetical protein;protein_id=PDP42723.1;transl_table=11 NSLJ01000040.1 Genbank gene 21744 22379 . + . ID=gene-CLI86_11995;Name=CLI86_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_11995 NSLJ01000040.1 Protein Homology CDS 21744 22379 . + 0 ID=cds-PDP42724.1;Parent=gene-CLI86_11995;Dbxref=NCBI_GP:PDP42724.1;Name=PDP42724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225790.1;locus_tag=CLI86_11995;product=YigZ family protein;protein_id=PDP42724.1;transl_table=11 NSLJ01000040.1 Genbank gene 22451 22789 . - . ID=gene-CLI86_12000;Name=CLI86_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12000 NSLJ01000040.1 Protein Homology CDS 22451 22789 . - 0 ID=cds-PDP42725.1;Parent=gene-CLI86_12000;Dbxref=NCBI_GP:PDP42725.1;Name=PDP42725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014182954.1;locus_tag=CLI86_12000;product=hypothetical protein;protein_id=PDP42725.1;transl_table=11 NSLJ01000040.1 Genbank gene 23024 24202 . + . ID=gene-CLI86_12005;Name=CLI86_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12005 NSLJ01000040.1 Protein Homology CDS 23024 24202 . + 0 ID=cds-PDP42726.1;Parent=gene-CLI86_12005;Dbxref=NCBI_GP:PDP42726.1;Name=PDP42726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225793.1;locus_tag=CLI86_12005;product=aminopeptidase P family protein;protein_id=PDP42726.1;transl_table=11 NSLJ01000040.1 Genbank gene 24202 25890 . + . ID=gene-CLI86_12010;Name=CLI86_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12010 NSLJ01000040.1 Protein Homology CDS 24202 25890 . + 0 ID=cds-PDP42729.1;Parent=gene-CLI86_12010;Dbxref=NCBI_GP:PDP42729.1;Name=PDP42729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005862711.1;locus_tag=CLI86_12010;product=alkaline phosphatase;protein_id=PDP42729.1;transl_table=11 NSLJ01000040.1 Genbank pseudogene 26334 26517 . + . ID=gene-CLI86_12015;Name=CLI86_12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12015;pseudo=true NSLJ01000040.1 Protein Homology CDS 26334 26517 . + 0 ID=cds-CLI86_12015;Parent=gene-CLI86_12015;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224580.1;locus_tag=CLI86_12015;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLJ01000041.1 1 26363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000041.1 Genbank region 1 26363 . + . ID=NSLJ01000041.1:1..26363;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000041.1 Genbank gene 721 4326 . + . ID=gene-CLI86_12020;Name=CLI86_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12020 NSLJ01000041.1 Protein Homology CDS 721 4326 . + 0 ID=cds-PDP42692.1;Parent=gene-CLI86_12020;Dbxref=NCBI_GP:PDP42692.1;Name=PDP42692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226275.1;locus_tag=CLI86_12020;product=DNA methylase;protein_id=PDP42692.1;transl_table=11 NSLJ01000041.1 Genbank gene 4481 5101 . + . ID=gene-CLI86_12025;Name=CLI86_12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12025 NSLJ01000041.1 Protein Homology CDS 4481 5101 . + 0 ID=cds-PDP42693.1;Parent=gene-CLI86_12025;Dbxref=NCBI_GP:PDP42693.1;Name=PDP42693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=CLI86_12025;product=TetR/AcrR family transcriptional regulator;protein_id=PDP42693.1;transl_table=11 NSLJ01000041.1 Genbank gene 5221 5733 . + . ID=gene-CLI86_12030;Name=CLI86_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12030 NSLJ01000041.1 GeneMarkS+ CDS 5221 5733 . + 0 ID=cds-PDP42694.1;Parent=gene-CLI86_12030;Dbxref=NCBI_GP:PDP42694.1;Name=PDP42694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12030;product=hypothetical protein;protein_id=PDP42694.1;transl_table=11 NSLJ01000041.1 Genbank gene 5726 5956 . + . ID=gene-CLI86_12035;Name=CLI86_12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12035 NSLJ01000041.1 GeneMarkS+ CDS 5726 5956 . + 0 ID=cds-PDP42695.1;Parent=gene-CLI86_12035;Dbxref=NCBI_GP:PDP42695.1;Name=PDP42695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12035;product=hypothetical protein;protein_id=PDP42695.1;transl_table=11 NSLJ01000041.1 Genbank gene 5949 7079 . + . ID=gene-CLI86_12040;Name=CLI86_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12040 NSLJ01000041.1 Protein Homology CDS 5949 7079 . + 0 ID=cds-PDP42696.1;Parent=gene-CLI86_12040;Dbxref=NCBI_GP:PDP42696.1;Name=PDP42696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226278.1;locus_tag=CLI86_12040;product=hypothetical protein;protein_id=PDP42696.1;transl_table=11 NSLJ01000041.1 Genbank gene 7103 9355 . + . ID=gene-CLI86_12045;Name=CLI86_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12045 NSLJ01000041.1 Protein Homology CDS 7103 9355 . + 0 ID=cds-PDP42697.1;Parent=gene-CLI86_12045;Dbxref=NCBI_GP:PDP42697.1;Name=PDP42697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03176.13;locus_tag=CLI86_12045;product=hypothetical protein;protein_id=PDP42697.1;transl_table=11 NSLJ01000041.1 Genbank gene 9352 10086 . + . ID=gene-CLI86_12050;Name=CLI86_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12050 NSLJ01000041.1 Protein Homology CDS 9352 10086 . + 0 ID=cds-PDP42698.1;Parent=gene-CLI86_12050;Dbxref=NCBI_GP:PDP42698.1;Name=PDP42698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17131.2;locus_tag=CLI86_12050;product=outer membrane lipoprotein-sorting protein;protein_id=PDP42698.1;transl_table=11 NSLJ01000041.1 Genbank gene 10098 11504 . + . ID=gene-CLI86_12055;Name=CLI86_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12055 NSLJ01000041.1 GeneMarkS+ CDS 10098 11504 . + 0 ID=cds-PDP42699.1;Parent=gene-CLI86_12055;Dbxref=NCBI_GP:PDP42699.1;Name=PDP42699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12055;product=hypothetical protein;protein_id=PDP42699.1;transl_table=11 NSLJ01000041.1 Genbank gene 11559 13988 . + . ID=gene-CLI86_12060;Name=CLI86_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12060 NSLJ01000041.1 Protein Homology CDS 11559 13988 . + 0 ID=cds-PDP42700.1;Parent=gene-CLI86_12060;Dbxref=NCBI_GP:PDP42700.1;Name=PDP42700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874555.1;locus_tag=CLI86_12060;product=hypothetical protein;protein_id=PDP42700.1;transl_table=11 NSLJ01000041.1 Genbank gene 13999 14547 . + . ID=gene-CLI86_12065;Name=CLI86_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12065 NSLJ01000041.1 Protein Homology CDS 13999 14547 . + 0 ID=cds-PDP42701.1;Parent=gene-CLI86_12065;Dbxref=NCBI_GP:PDP42701.1;Name=PDP42701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815659.1;locus_tag=CLI86_12065;product=hypothetical protein;protein_id=PDP42701.1;transl_table=11 NSLJ01000041.1 Genbank gene 14632 15279 . + . ID=gene-CLI86_12070;Name=CLI86_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12070 NSLJ01000041.1 Protein Homology CDS 14632 15279 . + 0 ID=cds-PDP42702.1;Parent=gene-CLI86_12070;Dbxref=NCBI_GP:PDP42702.1;Name=PDP42702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874667.1;locus_tag=CLI86_12070;product=HAD family hydrolase;protein_id=PDP42702.1;transl_table=11 NSLJ01000041.1 Genbank gene 15272 16723 . - . ID=gene-CLI86_12075;Name=CLI86_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12075 NSLJ01000041.1 Protein Homology CDS 15272 16723 . - 0 ID=cds-PDP42703.1;Parent=gene-CLI86_12075;Dbxref=NCBI_GP:PDP42703.1;Name=PDP42703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226288.1;locus_tag=CLI86_12075;product=AAA family ATPase;protein_id=PDP42703.1;transl_table=11 NSLJ01000041.1 Genbank pseudogene 16865 17800 . - . ID=gene-CLI86_12080;Name=CLI86_12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12080;pseudo=true NSLJ01000041.1 Protein Homology CDS 16865 17800 . - 0 ID=cds-CLI86_12080;Parent=gene-CLI86_12080;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_12080;product=IS1595 family transposase;pseudo=true;transl_table=11 NSLJ01000041.1 Genbank pseudogene 17786 18142 . + . ID=gene-CLI86_12085;Name=CLI86_12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12085;pseudo=true NSLJ01000041.1 Protein Homology CDS 17786 18142 . + 0 ID=cds-CLI86_12085;Parent=gene-CLI86_12085;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775479.1;locus_tag=CLI86_12085;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000041.1 Genbank gene 19931 20461 . + . ID=gene-CLI86_12090;Name=CLI86_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12090 NSLJ01000041.1 GeneMarkS+ CDS 19931 20461 . + 0 ID=cds-PDP42704.1;Parent=gene-CLI86_12090;Dbxref=NCBI_GP:PDP42704.1;Name=PDP42704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12090;product=hypothetical protein;protein_id=PDP42704.1;transl_table=11 NSLJ01000041.1 Genbank gene 20458 22449 . + . ID=gene-CLI86_12095;Name=CLI86_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12095 NSLJ01000041.1 Protein Homology CDS 20458 22449 . + 0 ID=cds-PDP42705.1;Parent=gene-CLI86_12095;Dbxref=NCBI_GP:PDP42705.1;Name=PDP42705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01650.16;locus_tag=CLI86_12095;product=hypothetical protein;protein_id=PDP42705.1;transl_table=11 NSLJ01000041.1 Genbank gene 23446 23997 . + . ID=gene-CLI86_12100;Name=CLI86_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12100 NSLJ01000041.1 GeneMarkS+ CDS 23446 23997 . + 0 ID=cds-PDP42706.1;Parent=gene-CLI86_12100;Dbxref=NCBI_GP:PDP42706.1;Name=PDP42706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12100;product=hypothetical protein;protein_id=PDP42706.1;transl_table=11 NSLJ01000041.1 Genbank gene 23999 25096 . + . ID=gene-CLI86_12105;Name=CLI86_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12105 NSLJ01000041.1 GeneMarkS+ CDS 23999 25096 . + 0 ID=cds-PDP42707.1;Parent=gene-CLI86_12105;Dbxref=NCBI_GP:PDP42707.1;Name=PDP42707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12105;product=hypothetical protein;protein_id=PDP42707.1;transl_table=11 NSLJ01000041.1 Genbank gene 25157 26170 . + . ID=gene-CLI86_12110;Name=CLI86_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12110 NSLJ01000041.1 Protein Homology CDS 25157 26170 . + 0 ID=cds-PDP42708.1;Parent=gene-CLI86_12110;Dbxref=NCBI_GP:PDP42708.1;Name=PDP42708.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_12110;product=T9SS C-terminal target domain-containing protein;protein_id=PDP42708.1;transl_table=11 ##sequence-region NSLJ01000042.1 1 26087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000042.1 Genbank region 1 26087 . + . ID=NSLJ01000042.1:1..26087;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000042.1 Genbank gene 1 109 . + . ID=gene-CLI86_12115;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI86_12115 NSLJ01000042.1 cmsearch rRNA 1 109 . + . ID=rna-CLI86_12115;Parent=gene-CLI86_12115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_12115;product=5S ribosomal RNA NSLJ01000042.1 cmsearch exon 1 109 . + . ID=exon-CLI86_12115-1;Parent=rna-CLI86_12115;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_12115;product=5S ribosomal RNA NSLJ01000042.1 Genbank gene 378 2018 . - . ID=gene-CLI86_12120;Name=CLI86_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12120 NSLJ01000042.1 Protein Homology CDS 378 2018 . - 0 ID=cds-PDP42672.1;Parent=gene-CLI86_12120;Dbxref=NCBI_GP:PDP42672.1;Name=PDP42672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226385.1;locus_tag=CLI86_12120;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP42672.1;transl_table=11 NSLJ01000042.1 Genbank gene 2052 5255 . - . ID=gene-CLI86_12125;Name=CLI86_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12125 NSLJ01000042.1 Protein Homology CDS 2052 5255 . - 0 ID=cds-PDP42673.1;Parent=gene-CLI86_12125;Dbxref=NCBI_GP:PDP42673.1;Name=PDP42673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226384.1;locus_tag=CLI86_12125;product=SusC/RagA family protein;protein_id=PDP42673.1;transl_table=11 NSLJ01000042.1 Genbank gene 5252 5548 . - . ID=gene-CLI86_12130;Name=CLI86_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12130 NSLJ01000042.1 GeneMarkS+ CDS 5252 5548 . - 0 ID=cds-PDP42674.1;Parent=gene-CLI86_12130;Dbxref=NCBI_GP:PDP42674.1;Name=PDP42674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12130;product=hypothetical protein;protein_id=PDP42674.1;transl_table=11 NSLJ01000042.1 Genbank gene 5696 6457 . + . ID=gene-CLI86_12135;Name=CLI86_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12135 NSLJ01000042.1 Protein Homology CDS 5696 6457 . + 0 ID=cds-PDP42675.1;Parent=gene-CLI86_12135;Dbxref=NCBI_GP:PDP42675.1;Name=PDP42675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226381.1;locus_tag=CLI86_12135;product=peroxide stress protein YaaA;protein_id=PDP42675.1;transl_table=11 NSLJ01000042.1 Genbank gene 6587 6922 . + . ID=gene-CLI86_12140;Name=CLI86_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12140 NSLJ01000042.1 Protein Homology CDS 6587 6922 . + 0 ID=cds-PDP42676.1;Parent=gene-CLI86_12140;Dbxref=NCBI_GP:PDP42676.1;Name=PDP42676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226380.1;locus_tag=CLI86_12140;product=hypothetical protein;protein_id=PDP42676.1;transl_table=11 NSLJ01000042.1 Genbank gene 6944 8215 . - . ID=gene-CLI86_12145;Name=CLI86_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12145 NSLJ01000042.1 Protein Homology CDS 6944 8215 . - 0 ID=cds-PDP42677.1;Parent=gene-CLI86_12145;Dbxref=NCBI_GP:PDP42677.1;Name=PDP42677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226379.1;locus_tag=CLI86_12145;product=DUF2088 domain-containing protein;protein_id=PDP42677.1;transl_table=11 NSLJ01000042.1 Genbank gene 8254 9321 . - . ID=gene-CLI86_12150;Name=CLI86_12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12150 NSLJ01000042.1 Protein Homology CDS 8254 9321 . - 0 ID=cds-PDP42678.1;Parent=gene-CLI86_12150;Dbxref=NCBI_GP:PDP42678.1;Name=PDP42678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015360161.1;locus_tag=CLI86_12150;product=sugar kinase;protein_id=PDP42678.1;transl_table=11 NSLJ01000042.1 Genbank gene 9355 10167 . - . ID=gene-CLI86_12155;Name=CLI86_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12155 NSLJ01000042.1 Protein Homology CDS 9355 10167 . - 0 ID=cds-PDP42679.1;Parent=gene-CLI86_12155;Dbxref=NCBI_GP:PDP42679.1;Name=PDP42679.1;Note=Converts D-mannonate to D-mannuronate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226377.1;locus_tag=CLI86_12155;product=D-mannonate oxidoreductase;protein_id=PDP42679.1;transl_table=11 NSLJ01000042.1 Genbank gene 10186 10809 . - . ID=gene-CLI86_12160;Name=CLI86_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12160 NSLJ01000042.1 Protein Homology CDS 10186 10809 . - 0 ID=cds-PDP42680.1;Parent=gene-CLI86_12160;Dbxref=NCBI_GP:PDP42680.1;Name=PDP42680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226376.1;locus_tag=CLI86_12160;product=hypothetical protein;protein_id=PDP42680.1;transl_table=11 NSLJ01000042.1 Genbank gene 10922 13486 . - . ID=gene-CLI86_12165;Name=CLI86_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12165 NSLJ01000042.1 Protein Homology CDS 10922 13486 . - 0 ID=cds-PDP42681.1;Parent=gene-CLI86_12165;Dbxref=NCBI_GP:PDP42681.1;Name=PDP42681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226375.1;locus_tag=CLI86_12165;product=alpha-glucan phosphorylase;protein_id=PDP42681.1;transl_table=11 NSLJ01000042.1 Genbank gene 13905 14636 . + . ID=gene-CLI86_12170;Name=CLI86_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12170 NSLJ01000042.1 GeneMarkS+ CDS 13905 14636 . + 0 ID=cds-PDP42682.1;Parent=gene-CLI86_12170;Dbxref=NCBI_GP:PDP42682.1;Name=PDP42682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12170;product=hypothetical protein;protein_id=PDP42682.1;transl_table=11 NSLJ01000042.1 Genbank gene 14655 16310 . - . ID=gene-CLI86_12175;Name=CLI86_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12175 NSLJ01000042.1 Protein Homology CDS 14655 16310 . - 0 ID=cds-PDP42683.1;Parent=gene-CLI86_12175;Dbxref=NCBI_GP:PDP42683.1;Name=PDP42683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226373.1;locus_tag=CLI86_12175;product=glycosyl transferase;protein_id=PDP42683.1;transl_table=11 NSLJ01000042.1 Genbank gene 16418 16762 . + . ID=gene-CLI86_12180;Name=CLI86_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12180 NSLJ01000042.1 GeneMarkS+ CDS 16418 16762 . + 0 ID=cds-PDP42684.1;Parent=gene-CLI86_12180;Dbxref=NCBI_GP:PDP42684.1;Name=PDP42684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12180;product=hypothetical protein;protein_id=PDP42684.1;transl_table=11 NSLJ01000042.1 Genbank gene 16759 17343 . + . ID=gene-CLI86_12185;Name=CLI86_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12185 NSLJ01000042.1 Protein Homology CDS 16759 17343 . + 0 ID=cds-PDP42685.1;Parent=gene-CLI86_12185;Dbxref=NCBI_GP:PDP42685.1;Name=PDP42685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226371.1;locus_tag=CLI86_12185;product=acyltransferase;protein_id=PDP42685.1;transl_table=11 NSLJ01000042.1 Genbank gene 17336 18124 . + . ID=gene-CLI86_12190;Name=CLI86_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12190 NSLJ01000042.1 Protein Homology CDS 17336 18124 . + 0 ID=cds-PDP42686.1;Parent=gene-CLI86_12190;Dbxref=NCBI_GP:PDP42686.1;Name=PDP42686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226370.1;locus_tag=CLI86_12190;product=amidohydrolase;protein_id=PDP42686.1;transl_table=11 NSLJ01000042.1 Genbank gene 18121 19272 . + . ID=gene-CLI86_12195;Name=CLI86_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12195 NSLJ01000042.1 Protein Homology CDS 18121 19272 . + 0 ID=cds-PDP42687.1;Parent=gene-CLI86_12195;Dbxref=NCBI_GP:PDP42687.1;Name=PDP42687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01042.19;locus_tag=CLI86_12195;product=hypothetical protein;protein_id=PDP42687.1;transl_table=11 NSLJ01000042.1 Genbank gene 19285 21096 . - . ID=gene-CLI86_12200;Name=CLI86_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12200 NSLJ01000042.1 Protein Homology CDS 19285 21096 . - 0 ID=cds-PDP42690.1;Parent=gene-CLI86_12200;Dbxref=NCBI_GP:PDP42690.1;Name=PDP42690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658976.1;locus_tag=CLI86_12200;product=beta-galactosidase;protein_id=PDP42690.1;transl_table=11 NSLJ01000042.1 Genbank gene 21251 24496 . - . ID=gene-CLI86_12205;Name=CLI86_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12205 NSLJ01000042.1 Protein Homology CDS 21251 24496 . - 0 ID=cds-PDP42688.1;Parent=gene-CLI86_12205;Dbxref=NCBI_GP:PDP42688.1;Name=PDP42688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640524.1;locus_tag=CLI86_12205;product=protease;protein_id=PDP42688.1;transl_table=11 NSLJ01000042.1 Genbank gene 24881 25954 . - . ID=gene-CLI86_12210;Name=CLI86_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12210 NSLJ01000042.1 GeneMarkS+ CDS 24881 25954 . - 0 ID=cds-PDP42689.1;Parent=gene-CLI86_12210;Dbxref=NCBI_GP:PDP42689.1;Name=PDP42689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12210;product=hypothetical protein;protein_id=PDP42689.1;transl_table=11 ##sequence-region NSLJ01000043.1 1 23802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000043.1 Genbank region 1 23802 . + . ID=NSLJ01000043.1:1..23802;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000043.1 Genbank gene 31 216 . + . ID=gene-CLI86_12215;Name=CLI86_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12215 NSLJ01000043.1 Protein Homology CDS 31 216 . + 0 ID=cds-PDP42667.1;Parent=gene-CLI86_12215;Dbxref=NCBI_GP:PDP42667.1;Name=PDP42667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_12215;product=hypothetical protein;protein_id=PDP42667.1;transl_table=11 NSLJ01000043.1 Genbank gene 234 1652 . + . ID=gene-CLI86_12220;Name=CLI86_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12220 NSLJ01000043.1 Protein Homology CDS 234 1652 . + 0 ID=cds-PDP42654.1;Parent=gene-CLI86_12220;Dbxref=NCBI_GP:PDP42654.1;Name=PDP42654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841877.1;locus_tag=CLI86_12220;product=adenosylhomocysteinase;protein_id=PDP42654.1;transl_table=11 NSLJ01000043.1 Genbank gene 1772 2035 . + . ID=gene-CLI86_12225;Name=CLI86_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12225 NSLJ01000043.1 Protein Homology CDS 1772 2035 . + 0 ID=cds-PDP42668.1;Parent=gene-CLI86_12225;Dbxref=NCBI_GP:PDP42668.1;Name=PDP42668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152745.1;locus_tag=CLI86_12225;product=tetratricopeptide repeat protein;protein_id=PDP42668.1;transl_table=11 NSLJ01000043.1 Genbank gene 2037 3842 . - . ID=gene-CLI86_12230;Name=CLI86_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12230 NSLJ01000043.1 Protein Homology CDS 2037 3842 . - 0 ID=cds-PDP42669.1;Parent=gene-CLI86_12230;Dbxref=NCBI_GP:PDP42669.1;Name=PDP42669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154404.1;locus_tag=CLI86_12230;product=TonB-dependent receptor;protein_id=PDP42669.1;transl_table=11 NSLJ01000043.1 Genbank gene 3884 6883 . - . ID=gene-CLI86_12235;Name=CLI86_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12235 NSLJ01000043.1 Protein Homology CDS 3884 6883 . - 0 ID=cds-PDP42655.1;Parent=gene-CLI86_12235;Dbxref=NCBI_GP:PDP42655.1;Name=PDP42655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772739.1;locus_tag=CLI86_12235;product=hypothetical protein;protein_id=PDP42655.1;transl_table=11 NSLJ01000043.1 Genbank gene 7003 9975 . - . ID=gene-CLI86_12240;Name=CLI86_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12240 NSLJ01000043.1 Protein Homology CDS 7003 9975 . - 0 ID=cds-PDP42656.1;Parent=gene-CLI86_12240;Dbxref=NCBI_GP:PDP42656.1;Name=PDP42656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640700.1;locus_tag=CLI86_12240;product=phosphoenolpyruvate synthase;protein_id=PDP42656.1;transl_table=11 NSLJ01000043.1 Genbank gene 10086 11420 . + . ID=gene-CLI86_12245;Name=CLI86_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12245 NSLJ01000043.1 Protein Homology CDS 10086 11420 . + 0 ID=cds-PDP42657.1;Parent=gene-CLI86_12245;Dbxref=NCBI_GP:PDP42657.1;Name=PDP42657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100912.1;locus_tag=CLI86_12245;product=NADP-specific glutamate dehydrogenase;protein_id=PDP42657.1;transl_table=11 NSLJ01000043.1 Genbank gene 11468 12043 . - . ID=gene-CLI86_12250;Name=CLI86_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12250 NSLJ01000043.1 Protein Homology CDS 11468 12043 . - 0 ID=cds-PDP42658.1;Parent=gene-CLI86_12250;Dbxref=NCBI_GP:PDP42658.1;Name=PDP42658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224533.1;locus_tag=CLI86_12250;product=crossover junction endodeoxyribonuclease RuvC;protein_id=PDP42658.1;transl_table=11 NSLJ01000043.1 Genbank gene 12040 12354 . - . ID=gene-CLI86_12255;Name=CLI86_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12255 NSLJ01000043.1 Protein Homology CDS 12040 12354 . - 0 ID=cds-PDP42659.1;Parent=gene-CLI86_12255;Dbxref=NCBI_GP:PDP42659.1;Name=PDP42659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646098.1;locus_tag=CLI86_12255;product=DUF4286 domain-containing protein;protein_id=PDP42659.1;transl_table=11 NSLJ01000043.1 Genbank gene 12428 12504 . + . ID=gene-CLI86_12260;Name=CLI86_12260;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_12260 NSLJ01000043.1 tRNAscan-SE tRNA 12428 12504 . + . ID=rna-CLI86_12260;Parent=gene-CLI86_12260;anticodon=(pos:12462..12464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12260;product=tRNA-Ala NSLJ01000043.1 tRNAscan-SE exon 12428 12504 . + . ID=exon-CLI86_12260-1;Parent=rna-CLI86_12260;anticodon=(pos:12462..12464);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12260;product=tRNA-Ala NSLJ01000043.1 Genbank gene 12535 14190 . - . ID=gene-CLI86_12265;Name=CLI86_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12265 NSLJ01000043.1 Protein Homology CDS 12535 14190 . - 0 ID=cds-PDP42660.1;Parent=gene-CLI86_12265;Dbxref=NCBI_GP:PDP42660.1;Name=PDP42660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224531.1;locus_tag=CLI86_12265;product=hypothetical protein;protein_id=PDP42660.1;transl_table=11 NSLJ01000043.1 Genbank gene 14597 18355 . + . ID=gene-CLI86_12270;Name=CLI86_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12270 NSLJ01000043.1 GeneMarkS+ CDS 14597 18355 . + 0 ID=cds-PDP42661.1;Parent=gene-CLI86_12270;Dbxref=NCBI_GP:PDP42661.1;Name=PDP42661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12270;product=hypothetical protein;protein_id=PDP42661.1;transl_table=11 NSLJ01000043.1 Genbank gene 18460 19368 . + . ID=gene-CLI86_12275;Name=CLI86_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12275 NSLJ01000043.1 GeneMarkS+ CDS 18460 19368 . + 0 ID=cds-PDP42662.1;Parent=gene-CLI86_12275;Dbxref=NCBI_GP:PDP42662.1;Name=PDP42662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12275;product=alpha/beta hydrolase;protein_id=PDP42662.1;transl_table=11 NSLJ01000043.1 Genbank gene 19316 21145 . - . ID=gene-CLI86_12280;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=CLI86_12280 NSLJ01000043.1 Protein Homology CDS 19316 21145 . - 0 ID=cds-PDP42663.1;Parent=gene-CLI86_12280;Dbxref=NCBI_GP:PDP42663.1;Name=PDP42663.1;gbkey=CDS;gene=ispG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224528.1;locus_tag=CLI86_12280;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=PDP42663.1;transl_table=11 NSLJ01000043.1 Genbank gene 21142 21648 . - . ID=gene-CLI86_12285;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CLI86_12285 NSLJ01000043.1 Protein Homology CDS 21142 21648 . - 0 ID=cds-PDP42664.1;Parent=gene-CLI86_12285;Dbxref=NCBI_GP:PDP42664.1;Name=PDP42664.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101636.1;locus_tag=CLI86_12285;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=PDP42664.1;transl_table=11 NSLJ01000043.1 Genbank gene 21655 22032 . - . ID=gene-CLI86_12290;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CLI86_12290 NSLJ01000043.1 Protein Homology CDS 21655 22032 . - 0 ID=cds-PDP42665.1;Parent=gene-CLI86_12290;Dbxref=NCBI_GP:PDP42665.1;Name=PDP42665.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006800830.1;locus_tag=CLI86_12290;product=glycine cleavage system protein H;protein_id=PDP42665.1;transl_table=11 NSLJ01000043.1 Genbank gene 22113 23570 . - . ID=gene-CLI86_12295;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CLI86_12295 NSLJ01000043.1 Protein Homology CDS 22113 23570 . - 0 ID=cds-PDP42666.1;Parent=gene-CLI86_12295;Dbxref=NCBI_GP:PDP42666.1;Name=PDP42666.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860047.1;locus_tag=CLI86_12295;product=RNA polymerase sigma-54 factor;protein_id=PDP42666.1;transl_table=11 NSLJ01000043.1 Genbank pseudogene 23593 23772 . - . ID=gene-CLI86_12300;Name=CLI86_12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12300;pseudo=true NSLJ01000043.1 Protein Homology CDS 23593 23772 . - 0 ID=cds-CLI86_12300;Parent=gene-CLI86_12300;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_12300;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLJ01000044.1 1 21766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000044.1 Genbank region 1 21766 . + . ID=NSLJ01000044.1:1..21766;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000044.1 Genbank pseudogene 223 483 . + . ID=gene-CLI86_12305;Name=CLI86_12305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12305;pseudo=true NSLJ01000044.1 Protein Homology CDS 223 483 . + 0 ID=cds-CLI86_12305;Parent=gene-CLI86_12305;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225808.1;locus_tag=CLI86_12305;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000044.1 Genbank gene 862 2175 . - . ID=gene-CLI86_12310;Name=CLI86_12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12310 NSLJ01000044.1 Protein Homology CDS 862 2175 . - 0 ID=cds-PDP42634.1;Parent=gene-CLI86_12310;Dbxref=NCBI_GP:PDP42634.1;Name=PDP42634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224576.1;locus_tag=CLI86_12310;product=DUF58 domain-containing protein;protein_id=PDP42634.1;transl_table=11 NSLJ01000044.1 Genbank gene 2175 3146 . - . ID=gene-CLI86_12315;Name=CLI86_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12315 NSLJ01000044.1 Protein Homology CDS 2175 3146 . - 0 ID=cds-PDP42635.1;Parent=gene-CLI86_12315;Dbxref=NCBI_GP:PDP42635.1;Name=PDP42635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224575.1;locus_tag=CLI86_12315;product=MoxR family ATPase;protein_id=PDP42635.1;transl_table=11 NSLJ01000044.1 Genbank gene 3148 4611 . - . ID=gene-CLI86_12320;Name=CLI86_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12320 NSLJ01000044.1 GeneMarkS+ CDS 3148 4611 . - 0 ID=cds-PDP42636.1;Parent=gene-CLI86_12320;Dbxref=NCBI_GP:PDP42636.1;Name=PDP42636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12320;product=hypothetical protein;protein_id=PDP42636.1;transl_table=11 NSLJ01000044.1 Genbank gene 4640 5290 . - . ID=gene-CLI86_12325;Name=CLI86_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12325 NSLJ01000044.1 Protein Homology CDS 4640 5290 . - 0 ID=cds-PDP42637.1;Parent=gene-CLI86_12325;Dbxref=NCBI_GP:PDP42637.1;Name=PDP42637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002559245.1;locus_tag=CLI86_12325;product=DUF4129 domain-containing protein;protein_id=PDP42637.1;transl_table=11 NSLJ01000044.1 Genbank gene 5300 6043 . - . ID=gene-CLI86_12330;Name=CLI86_12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12330 NSLJ01000044.1 GeneMarkS+ CDS 5300 6043 . - 0 ID=cds-PDP42638.1;Parent=gene-CLI86_12330;Dbxref=NCBI_GP:PDP42638.1;Name=PDP42638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12330;product=hypothetical protein;protein_id=PDP42638.1;transl_table=11 NSLJ01000044.1 Genbank gene 6219 7202 . - . ID=gene-CLI86_12335;Name=CLI86_12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12335 NSLJ01000044.1 Protein Homology CDS 6219 7202 . - 0 ID=cds-PDP42639.1;Parent=gene-CLI86_12335;Dbxref=NCBI_GP:PDP42639.1;Name=PDP42639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224571.1;locus_tag=CLI86_12335;product=stage II sporulation protein M;protein_id=PDP42639.1;transl_table=11 NSLJ01000044.1 Genbank gene 8227 8526 . - . ID=gene-CLI86_12340;Name=CLI86_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12340 NSLJ01000044.1 GeneMarkS+ CDS 8227 8526 . - 0 ID=cds-PDP42640.1;Parent=gene-CLI86_12340;Dbxref=NCBI_GP:PDP42640.1;Name=PDP42640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12340;product=hypothetical protein;protein_id=PDP42640.1;transl_table=11 NSLJ01000044.1 Genbank gene 8584 9567 . - . ID=gene-CLI86_12345;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CLI86_12345 NSLJ01000044.1 Protein Homology CDS 8584 9567 . - 0 ID=cds-PDP42641.1;Parent=gene-CLI86_12345;Dbxref=NCBI_GP:PDP42641.1;Name=PDP42641.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654871.1;locus_tag=CLI86_12345;product=6-phosphofructokinase;protein_id=PDP42641.1;transl_table=11 NSLJ01000044.1 Genbank gene 9695 11101 . - . ID=gene-CLI86_12350;Name=CLI86_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12350 NSLJ01000044.1 Protein Homology CDS 9695 11101 . - 0 ID=cds-PDP42650.1;Parent=gene-CLI86_12350;Dbxref=NCBI_GP:PDP42650.1;Name=PDP42650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224566.1;locus_tag=CLI86_12350;product=glucuronate isomerase;protein_id=PDP42650.1;transl_table=11 NSLJ01000044.1 Genbank gene 11101 12906 . - . ID=gene-CLI86_12355;Name=CLI86_12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12355 NSLJ01000044.1 Protein Homology CDS 11101 12906 . - 0 ID=cds-PDP42651.1;Parent=gene-CLI86_12355;Dbxref=NCBI_GP:PDP42651.1;Name=PDP42651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860126.1;locus_tag=CLI86_12355;product=Na/Pi cotransporter;protein_id=PDP42651.1;transl_table=11 NSLJ01000044.1 Genbank gene 12970 14649 . + . ID=gene-CLI86_12360;Name=CLI86_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12360 NSLJ01000044.1 Protein Homology CDS 12970 14649 . + 0 ID=cds-PDP42642.1;Parent=gene-CLI86_12360;Dbxref=NCBI_GP:PDP42642.1;Name=PDP42642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224564.1;locus_tag=CLI86_12360;product=nucleoside kinase;protein_id=PDP42642.1;transl_table=11 NSLJ01000044.1 Genbank gene 14646 15560 . - . ID=gene-CLI86_12365;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CLI86_12365 NSLJ01000044.1 Protein Homology CDS 14646 15560 . - 0 ID=cds-PDP42643.1;Parent=gene-CLI86_12365;Dbxref=NCBI_GP:PDP42643.1;Name=PDP42643.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224563.1;locus_tag=CLI86_12365;product=deoxyribose-phosphate aldolase;protein_id=PDP42643.1;transl_table=11 NSLJ01000044.1 Genbank gene 15567 15923 . - . ID=gene-CLI86_12370;Name=CLI86_12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12370 NSLJ01000044.1 Protein Homology CDS 15567 15923 . - 0 ID=cds-PDP42644.1;Parent=gene-CLI86_12370;Dbxref=NCBI_GP:PDP42644.1;Name=PDP42644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224562.1;locus_tag=CLI86_12370;product=pyrophosphatase;protein_id=PDP42644.1;transl_table=11 NSLJ01000044.1 Genbank gene 15898 17451 . - . ID=gene-CLI86_12375;Name=CLI86_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12375 NSLJ01000044.1 Protein Homology CDS 15898 17451 . - 0 ID=cds-PDP42645.1;Parent=gene-CLI86_12375;Dbxref=NCBI_GP:PDP42645.1;Name=PDP42645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224561.1;locus_tag=CLI86_12375;product=sulfatase;protein_id=PDP42645.1;transl_table=11 NSLJ01000044.1 Genbank gene 17529 17918 . + . ID=gene-CLI86_12380;Name=CLI86_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12380 NSLJ01000044.1 Protein Homology CDS 17529 17918 . + 0 ID=cds-PDP42646.1;Parent=gene-CLI86_12380;Dbxref=NCBI_GP:PDP42646.1;Name=PDP42646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00581.18;locus_tag=CLI86_12380;product=rhodanese;protein_id=PDP42646.1;transl_table=11 NSLJ01000044.1 Genbank gene 18052 18348 . - . ID=gene-CLI86_12385;Name=CLI86_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12385 NSLJ01000044.1 GeneMarkS+ CDS 18052 18348 . - 0 ID=cds-PDP42647.1;Parent=gene-CLI86_12385;Dbxref=NCBI_GP:PDP42647.1;Name=PDP42647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12385;product=hypothetical protein;protein_id=PDP42647.1;transl_table=11 NSLJ01000044.1 Genbank gene 18544 19263 . - . ID=gene-CLI86_12390;Name=CLI86_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12390 NSLJ01000044.1 Protein Homology CDS 18544 19263 . - 0 ID=cds-PDP42648.1;Parent=gene-CLI86_12390;Dbxref=NCBI_GP:PDP42648.1;Name=PDP42648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=CLI86_12390;product=hypothetical protein;protein_id=PDP42648.1;transl_table=11 NSLJ01000044.1 Genbank gene 19464 20933 . - . ID=gene-CLI86_12395;Name=CLI86_12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12395 NSLJ01000044.1 Protein Homology CDS 19464 20933 . - 0 ID=cds-PDP42649.1;Parent=gene-CLI86_12395;Dbxref=NCBI_GP:PDP42649.1;Name=PDP42649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02624.14;locus_tag=CLI86_12395;product=hypothetical protein;protein_id=PDP42649.1;transl_table=11 ##sequence-region NSLJ01000045.1 1 21362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000045.1 Genbank region 1 21362 . + . ID=NSLJ01000045.1:1..21362;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000045.1 Genbank gene 42 2819 . + . ID=gene-CLI86_12400;Name=CLI86_12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12400 NSLJ01000045.1 Protein Homology CDS 42 2819 . + 0 ID=cds-PDP42628.1;Parent=gene-CLI86_12400;Dbxref=NCBI_GP:PDP42628.1;Name=PDP42628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014710150.1;locus_tag=CLI86_12400;product=hybrid sensor histidine kinase/response regulator;protein_id=PDP42628.1;transl_table=11 NSLJ01000045.1 Genbank gene 2816 3016 . + . ID=gene-CLI86_12405;Name=CLI86_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12405 NSLJ01000045.1 Protein Homology CDS 2816 3016 . + 0 ID=cds-PDP42616.1;Parent=gene-CLI86_12405;Dbxref=NCBI_GP:PDP42616.1;Name=PDP42616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364076.1;locus_tag=CLI86_12405;product=hypothetical protein;protein_id=PDP42616.1;transl_table=11 NSLJ01000045.1 Genbank gene 3267 4160 . - . ID=gene-CLI86_12410;Name=CLI86_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12410 NSLJ01000045.1 Protein Homology CDS 3267 4160 . - 0 ID=cds-PDP42617.1;Parent=gene-CLI86_12410;Dbxref=NCBI_GP:PDP42617.1;Name=PDP42617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225497.1;locus_tag=CLI86_12410;product=phospholipase;protein_id=PDP42617.1;transl_table=11 NSLJ01000045.1 Genbank gene 4157 4840 . - . ID=gene-CLI86_12415;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CLI86_12415 NSLJ01000045.1 Protein Homology CDS 4157 4840 . - 0 ID=cds-PDP42629.1;Parent=gene-CLI86_12415;Dbxref=NCBI_GP:PDP42629.1;Name=PDP42629.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225496.1;locus_tag=CLI86_12415;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=PDP42629.1;transl_table=11 NSLJ01000045.1 Genbank gene 5074 7662 . + . ID=gene-CLI86_12420;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CLI86_12420 NSLJ01000045.1 Protein Homology CDS 5074 7662 . + 0 ID=cds-PDP42630.1;Parent=gene-CLI86_12420;Dbxref=NCBI_GP:PDP42630.1;Name=PDP42630.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813508.1;locus_tag=CLI86_12420;product=ATP-dependent chaperone ClpB;protein_id=PDP42630.1;transl_table=11 NSLJ01000045.1 Genbank gene 8937 9623 . + . ID=gene-CLI86_12425;Name=CLI86_12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12425 NSLJ01000045.1 Protein Homology CDS 8937 9623 . + 0 ID=cds-PDP42631.1;Parent=gene-CLI86_12425;Dbxref=NCBI_GP:PDP42631.1;Name=PDP42631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007652831.1;locus_tag=CLI86_12425;product=OmpA family protein;protein_id=PDP42631.1;transl_table=11 NSLJ01000045.1 Genbank gene 9753 11945 . + . ID=gene-CLI86_12430;Name=CLI86_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12430 NSLJ01000045.1 Protein Homology CDS 9753 11945 . + 0 ID=cds-PDP42632.1;Parent=gene-CLI86_12430;Dbxref=NCBI_GP:PDP42632.1;Name=PDP42632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225488.1;locus_tag=CLI86_12430;product=beta-glucosidase BglX;protein_id=PDP42632.1;transl_table=11 NSLJ01000045.1 Genbank gene 12036 12374 . + . ID=gene-CLI86_12435;Name=CLI86_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12435 NSLJ01000045.1 GeneMarkS+ CDS 12036 12374 . + 0 ID=cds-PDP42618.1;Parent=gene-CLI86_12435;Dbxref=NCBI_GP:PDP42618.1;Name=PDP42618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12435;product=hypothetical protein;protein_id=PDP42618.1;transl_table=11 NSLJ01000045.1 Genbank gene 12384 13019 . + . ID=gene-CLI86_12440;Name=CLI86_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12440 NSLJ01000045.1 Protein Homology CDS 12384 13019 . + 0 ID=cds-PDP42619.1;Parent=gene-CLI86_12440;Dbxref=NCBI_GP:PDP42619.1;Name=PDP42619.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_12440;product=hypothetical protein;protein_id=PDP42619.1;transl_table=11 NSLJ01000045.1 Genbank gene 12991 13272 . + . ID=gene-CLI86_12445;Name=CLI86_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12445 NSLJ01000045.1 GeneMarkS+ CDS 12991 13272 . + 0 ID=cds-PDP42620.1;Parent=gene-CLI86_12445;Dbxref=NCBI_GP:PDP42620.1;Name=PDP42620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12445;product=hypothetical protein;protein_id=PDP42620.1;transl_table=11 NSLJ01000045.1 Genbank gene 13388 13462 . - . ID=gene-CLI86_12450;Name=CLI86_12450;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_12450 NSLJ01000045.1 tRNAscan-SE tRNA 13388 13462 . - . ID=rna-CLI86_12450;Parent=gene-CLI86_12450;anticodon=(pos:complement(13428..13430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12450;product=tRNA-Met NSLJ01000045.1 tRNAscan-SE exon 13388 13462 . - . ID=exon-CLI86_12450-1;Parent=rna-CLI86_12450;anticodon=(pos:complement(13428..13430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12450;product=tRNA-Met NSLJ01000045.1 Genbank gene 13608 14213 . + . ID=gene-CLI86_12455;Name=CLI86_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12455 NSLJ01000045.1 Protein Homology CDS 13608 14213 . + 0 ID=cds-PDP42621.1;Parent=gene-CLI86_12455;Dbxref=NCBI_GP:PDP42621.1;Name=PDP42621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641117.1;locus_tag=CLI86_12455;product=TetR/AcrR family transcriptional regulator;protein_id=PDP42621.1;transl_table=11 NSLJ01000045.1 Genbank gene 14203 15147 . + . ID=gene-CLI86_12460;Name=CLI86_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12460 NSLJ01000045.1 Protein Homology CDS 14203 15147 . + 0 ID=cds-PDP42622.1;Parent=gene-CLI86_12460;Dbxref=NCBI_GP:PDP42622.1;Name=PDP42622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225485.1;locus_tag=CLI86_12460;product=3-oxoacyl-ACP synthase;protein_id=PDP42622.1;transl_table=11 NSLJ01000045.1 Genbank gene 15201 15947 . + . ID=gene-CLI86_12465;Name=CLI86_12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12465 NSLJ01000045.1 Protein Homology CDS 15201 15947 . + 0 ID=cds-PDP42623.1;Parent=gene-CLI86_12465;Dbxref=NCBI_GP:PDP42623.1;Name=PDP42623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010536417.1;locus_tag=CLI86_12465;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=PDP42623.1;transl_table=11 NSLJ01000045.1 Genbank gene 15992 17104 . + . ID=gene-CLI86_12470;Name=CLI86_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12470 NSLJ01000045.1 Protein Homology CDS 15992 17104 . + 0 ID=cds-PDP42624.1;Parent=gene-CLI86_12470;Dbxref=NCBI_GP:PDP42624.1;Name=PDP42624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272503.1;locus_tag=CLI86_12470;product=hypothetical protein;protein_id=PDP42624.1;transl_table=11 NSLJ01000045.1 Genbank gene 17221 17892 . + . ID=gene-CLI86_12475;Name=CLI86_12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12475 NSLJ01000045.1 Protein Homology CDS 17221 17892 . + 0 ID=cds-PDP42625.1;Parent=gene-CLI86_12475;Dbxref=NCBI_GP:PDP42625.1;Name=PDP42625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641111.1;locus_tag=CLI86_12475;product=RNA pseudouridine synthase;protein_id=PDP42625.1;transl_table=11 NSLJ01000045.1 Genbank gene 17956 19071 . - . ID=gene-CLI86_12480;Name=CLI86_12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12480 NSLJ01000045.1 Protein Homology CDS 17956 19071 . - 0 ID=cds-PDP42626.1;Parent=gene-CLI86_12480;Dbxref=NCBI_GP:PDP42626.1;Name=PDP42626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855913.1;locus_tag=CLI86_12480;product=thiol:disulfide interchange protein;protein_id=PDP42626.1;transl_table=11 NSLJ01000045.1 Genbank gene 19585 21261 . + . ID=gene-CLI86_12485;Name=CLI86_12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12485 NSLJ01000045.1 GeneMarkS+ CDS 19585 21261 . + 0 ID=cds-PDP42627.1;Parent=gene-CLI86_12485;Dbxref=NCBI_GP:PDP42627.1;Name=PDP42627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12485;product=hypothetical protein;protein_id=PDP42627.1;transl_table=11 ##sequence-region NSLJ01000046.1 1 21061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000046.1 Genbank region 1 21061 . + . ID=NSLJ01000046.1:1..21061;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000046.1 Genbank gene 222 2849 . - . ID=gene-CLI86_12490;Name=CLI86_12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12490 NSLJ01000046.1 Protein Homology CDS 222 2849 . - 0 ID=cds-PDP42596.1;Parent=gene-CLI86_12490;Dbxref=NCBI_GP:PDP42596.1;Name=PDP42596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224212.1;locus_tag=CLI86_12490;product=hypothetical protein;protein_id=PDP42596.1;transl_table=11 NSLJ01000046.1 Genbank gene 3036 3887 . - . ID=gene-CLI86_12495;Name=CLI86_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12495 NSLJ01000046.1 Protein Homology CDS 3036 3887 . - 0 ID=cds-PDP42597.1;Parent=gene-CLI86_12495;Dbxref=NCBI_GP:PDP42597.1;Name=PDP42597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01200;locus_tag=CLI86_12495;product=GLPGLI family protein;protein_id=PDP42597.1;transl_table=11 NSLJ01000046.1 Genbank gene 4257 5756 . - . ID=gene-CLI86_12500;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CLI86_12500 NSLJ01000046.1 Protein Homology CDS 4257 5756 . - 0 ID=cds-PDP42598.1;Parent=gene-CLI86_12500;Dbxref=NCBI_GP:PDP42598.1;Name=PDP42598.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224209.1;locus_tag=CLI86_12500;product=histidine ammonia-lyase;protein_id=PDP42598.1;transl_table=11 NSLJ01000046.1 Genbank gene 5771 6400 . - . ID=gene-CLI86_12505;Name=CLI86_12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12505 NSLJ01000046.1 Protein Homology CDS 5771 6400 . - 0 ID=cds-PDP42599.1;Parent=gene-CLI86_12505;Dbxref=NCBI_GP:PDP42599.1;Name=PDP42599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224208.1;locus_tag=CLI86_12505;product=methenyltetrahydrofolate cyclohydrolase;protein_id=PDP42599.1;transl_table=11 NSLJ01000046.1 Genbank gene 6455 6835 . - . ID=gene-CLI86_12510;Name=CLI86_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12510 NSLJ01000046.1 Protein Homology CDS 6455 6835 . - 0 ID=cds-PDP42600.1;Parent=gene-CLI86_12510;Dbxref=NCBI_GP:PDP42600.1;Name=PDP42600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224207.1;locus_tag=CLI86_12510;product=four helix bundle protein;protein_id=PDP42600.1;transl_table=11 NSLJ01000046.1 Genbank gene 6887 8125 . - . ID=gene-CLI86_12515;Name=CLI86_12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12515 NSLJ01000046.1 Protein Homology CDS 6887 8125 . - 0 ID=cds-PDP42601.1;Parent=gene-CLI86_12515;Dbxref=NCBI_GP:PDP42601.1;Name=PDP42601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005365362.1;locus_tag=CLI86_12515;product=imidazolonepropionase;protein_id=PDP42601.1;transl_table=11 NSLJ01000046.1 Genbank gene 8184 9080 . - . ID=gene-CLI86_12520;Name=ftcD;gbkey=Gene;gene=ftcD;gene_biotype=protein_coding;locus_tag=CLI86_12520 NSLJ01000046.1 Protein Homology CDS 8184 9080 . - 0 ID=cds-PDP42602.1;Parent=gene-CLI86_12520;Dbxref=NCBI_GP:PDP42602.1;Name=PDP42602.1;gbkey=CDS;gene=ftcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013546696.1;locus_tag=CLI86_12520;product=glutamate formimidoyltransferase;protein_id=PDP42602.1;transl_table=11 NSLJ01000046.1 Genbank gene 9223 12147 . - . ID=gene-CLI86_12525;Name=CLI86_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12525 NSLJ01000046.1 Protein Homology CDS 9223 12147 . - 0 ID=cds-PDP42603.1;Parent=gene-CLI86_12525;Dbxref=NCBI_GP:PDP42603.1;Name=PDP42603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224204.1;locus_tag=CLI86_12525;product=trypsin;protein_id=PDP42603.1;transl_table=11 NSLJ01000046.1 Genbank gene 12177 12482 . - . ID=gene-CLI86_12530;Name=CLI86_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12530 NSLJ01000046.1 GeneMarkS+ CDS 12177 12482 . - 0 ID=cds-PDP42604.1;Parent=gene-CLI86_12530;Dbxref=NCBI_GP:PDP42604.1;Name=PDP42604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12530;product=hypothetical protein;protein_id=PDP42604.1;transl_table=11 NSLJ01000046.1 Genbank gene 12531 13541 . - . ID=gene-CLI86_12535;Name=CLI86_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12535 NSLJ01000046.1 Protein Homology CDS 12531 13541 . - 0 ID=cds-PDP42605.1;Parent=gene-CLI86_12535;Dbxref=NCBI_GP:PDP42605.1;Name=PDP42605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224202.1;locus_tag=CLI86_12535;product=hypothetical protein;protein_id=PDP42605.1;transl_table=11 NSLJ01000046.1 Genbank gene 13546 15534 . - . ID=gene-CLI86_12540;Name=CLI86_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12540 NSLJ01000046.1 Protein Homology CDS 13546 15534 . - 0 ID=cds-PDP42606.1;Parent=gene-CLI86_12540;Dbxref=NCBI_GP:PDP42606.1;Name=PDP42606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008670733.1;locus_tag=CLI86_12540;product=urocanate hydratase;protein_id=PDP42606.1;transl_table=11 NSLJ01000046.1 Genbank gene 15653 17059 . - . ID=gene-CLI86_12545;Name=CLI86_12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12545 NSLJ01000046.1 Protein Homology CDS 15653 17059 . - 0 ID=cds-PDP42607.1;Parent=gene-CLI86_12545;Dbxref=NCBI_GP:PDP42607.1;Name=PDP42607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856826.1;locus_tag=CLI86_12545;product=glycosyl hydrolase;protein_id=PDP42607.1;transl_table=11 NSLJ01000046.1 Genbank gene 17428 18771 . + . ID=gene-CLI86_12550;Name=CLI86_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12550 NSLJ01000046.1 Protein Homology CDS 17428 18771 . + 0 ID=cds-PDP42610.1;Parent=gene-CLI86_12550;Dbxref=NCBI_GP:PDP42610.1;Name=PDP42610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224197.1;locus_tag=CLI86_12550;product=arylsulfatase;protein_id=PDP42610.1;transl_table=11 NSLJ01000046.1 Genbank gene 18869 19258 . + . ID=gene-CLI86_12555;Name=CLI86_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12555 NSLJ01000046.1 GeneMarkS+ CDS 18869 19258 . + 0 ID=cds-PDP42608.1;Parent=gene-CLI86_12555;Dbxref=NCBI_GP:PDP42608.1;Name=PDP42608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12555;product=hypothetical protein;protein_id=PDP42608.1;transl_table=11 NSLJ01000046.1 Genbank gene 19664 20539 . - . ID=gene-CLI86_12560;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CLI86_12560 NSLJ01000046.1 Protein Homology CDS 19664 20539 . - 0 ID=cds-PDP42611.1;Parent=gene-CLI86_12560;Dbxref=NCBI_GP:PDP42611.1;Name=PDP42611.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224195.1;locus_tag=CLI86_12560;product=prolipoprotein diacylglyceryl transferase;protein_id=PDP42611.1;transl_table=11 NSLJ01000046.1 Genbank gene 20635 21039 . + . ID=gene-CLI86_12565;Name=CLI86_12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12565 NSLJ01000046.1 Protein Homology CDS 20635 21039 . + 0 ID=cds-PDP42609.1;Parent=gene-CLI86_12565;Dbxref=NCBI_GP:PDP42609.1;Name=PDP42609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14294.4;locus_tag=CLI86_12565;product=hypothetical protein;protein_id=PDP42609.1;transl_table=11 ##sequence-region NSLJ01000047.1 1 18929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000047.1 Genbank region 1 18929 . + . ID=NSLJ01000047.1:1..18929;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000047.1 Genbank pseudogene 123 296 . - . ID=gene-CLI86_12570;Name=CLI86_12570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12570;pseudo=true NSLJ01000047.1 Protein Homology CDS 123 296 . - 0 ID=cds-CLI86_12570;Parent=gene-CLI86_12570;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224719.1;locus_tag=CLI86_12570;product=nucleotidyltransferase;pseudo=true;transl_table=11 NSLJ01000047.1 Genbank pseudogene 281 990 . - . ID=gene-CLI86_12575;Name=CLI86_12575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12575;pseudo=true NSLJ01000047.1 Protein Homology CDS 281 990 . - 0 ID=cds-CLI86_12575;Parent=gene-CLI86_12575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874356.1;locus_tag=CLI86_12575;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000047.1 Genbank gene 1234 2166 . - . ID=gene-CLI86_12580;Name=CLI86_12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12580 NSLJ01000047.1 Protein Homology CDS 1234 2166 . - 0 ID=cds-PDP42577.1;Parent=gene-CLI86_12580;Dbxref=NCBI_GP:PDP42577.1;Name=PDP42577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584877.1;locus_tag=CLI86_12580;product=CAAX protease;protein_id=PDP42577.1;transl_table=11 NSLJ01000047.1 Genbank gene 2325 2633 . - . ID=gene-CLI86_12585;Name=CLI86_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12585 NSLJ01000047.1 Protein Homology CDS 2325 2633 . - 0 ID=cds-PDP42578.1;Parent=gene-CLI86_12585;Dbxref=NCBI_GP:PDP42578.1;Name=PDP42578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004380923.1;locus_tag=CLI86_12585;product=DNA-binding protein;protein_id=PDP42578.1;transl_table=11 NSLJ01000047.1 Genbank pseudogene 2621 3130 . - . ID=gene-CLI86_12590;Name=CLI86_12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12590;pseudo=true NSLJ01000047.1 Protein Homology CDS 2621 3130 . - 0 ID=cds-CLI86_12590;Parent=gene-CLI86_12590;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671971.1;locus_tag=CLI86_12590;product=topoisomerase;pseudo=true;transl_table=11 NSLJ01000047.1 Genbank gene 3260 3742 . - . ID=gene-CLI86_12595;Name=CLI86_12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12595 NSLJ01000047.1 GeneMarkS+ CDS 3260 3742 . - 0 ID=cds-PDP42579.1;Parent=gene-CLI86_12595;Dbxref=NCBI_GP:PDP42579.1;Name=PDP42579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12595;product=hypothetical protein;protein_id=PDP42579.1;transl_table=11 NSLJ01000047.1 Genbank gene 3966 5597 . - . ID=gene-CLI86_12600;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CLI86_12600 NSLJ01000047.1 Protein Homology CDS 3966 5597 . - 0 ID=cds-PDP42580.1;Parent=gene-CLI86_12600;Dbxref=NCBI_GP:PDP42580.1;Name=PDP42580.1;gbkey=CDS;gene=pruA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854238.1;locus_tag=CLI86_12600;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=PDP42580.1;transl_table=11 NSLJ01000047.1 Genbank gene 5630 6505 . - . ID=gene-CLI86_12605;Name=CLI86_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12605 NSLJ01000047.1 Protein Homology CDS 5630 6505 . - 0 ID=cds-PDP42581.1;Parent=gene-CLI86_12605;Dbxref=NCBI_GP:PDP42581.1;Name=PDP42581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966697.1;locus_tag=CLI86_12605;product=phosphorylase;protein_id=PDP42581.1;transl_table=11 NSLJ01000047.1 Genbank gene 6518 7990 . - . ID=gene-CLI86_12610;Name=CLI86_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12610 NSLJ01000047.1 Protein Homology CDS 6518 7990 . - 0 ID=cds-PDP42582.1;Parent=gene-CLI86_12610;Dbxref=NCBI_GP:PDP42582.1;Name=PDP42582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224725.1;locus_tag=CLI86_12610;product=hypothetical protein;protein_id=PDP42582.1;transl_table=11 NSLJ01000047.1 Genbank gene 8032 8931 . - . ID=gene-CLI86_12615;Name=CLI86_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12615 NSLJ01000047.1 Protein Homology CDS 8032 8931 . - 0 ID=cds-PDP42583.1;Parent=gene-CLI86_12615;Dbxref=NCBI_GP:PDP42583.1;Name=PDP42583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854367.1;locus_tag=CLI86_12615;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP42583.1;transl_table=11 NSLJ01000047.1 Genbank gene 8938 9501 . - . ID=gene-CLI86_12620;Name=CLI86_12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12620 NSLJ01000047.1 Protein Homology CDS 8938 9501 . - 0 ID=cds-PDP42584.1;Parent=gene-CLI86_12620;Dbxref=NCBI_GP:PDP42584.1;Name=PDP42584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635922.1;locus_tag=CLI86_12620;product=hypothetical protein;protein_id=PDP42584.1;transl_table=11 NSLJ01000047.1 Genbank gene 9522 10304 . - . ID=gene-CLI86_12625;Name=CLI86_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12625 NSLJ01000047.1 Protein Homology CDS 9522 10304 . - 0 ID=cds-PDP42585.1;Parent=gene-CLI86_12625;Dbxref=NCBI_GP:PDP42585.1;Name=PDP42585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224728.1;locus_tag=CLI86_12625;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=PDP42585.1;transl_table=11 NSLJ01000047.1 Genbank gene 10308 11693 . - . ID=gene-CLI86_12630;Name=CLI86_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12630 NSLJ01000047.1 Protein Homology CDS 10308 11693 . - 0 ID=cds-PDP42586.1;Parent=gene-CLI86_12630;Dbxref=NCBI_GP:PDP42586.1;Name=PDP42586.1;Note=catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635929.1;locus_tag=CLI86_12630;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=PDP42586.1;transl_table=11 NSLJ01000047.1 Genbank gene 11706 12743 . - . ID=gene-CLI86_12635;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CLI86_12635 NSLJ01000047.1 Protein Homology CDS 11706 12743 . - 0 ID=cds-PDP42587.1;Parent=gene-CLI86_12635;Dbxref=NCBI_GP:PDP42587.1;Name=PDP42587.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864351.1;locus_tag=CLI86_12635;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=PDP42587.1;transl_table=11 NSLJ01000047.1 Genbank gene 12917 13669 . - . ID=gene-CLI86_12640;Name=CLI86_12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12640 NSLJ01000047.1 GeneMarkS+ CDS 12917 13669 . - 0 ID=cds-PDP42588.1;Parent=gene-CLI86_12640;Dbxref=NCBI_GP:PDP42588.1;Name=PDP42588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12640;product=hypothetical protein;protein_id=PDP42588.1;transl_table=11 NSLJ01000047.1 Genbank gene 13763 14587 . - . ID=gene-CLI86_12645;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CLI86_12645 NSLJ01000047.1 Protein Homology CDS 13763 14587 . - 0 ID=cds-PDP42589.1;Parent=gene-CLI86_12645;Dbxref=NCBI_GP:PDP42589.1;Name=PDP42589.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813120.1;locus_tag=CLI86_12645;product=orotidine-5'-phosphate decarboxylase;protein_id=PDP42589.1;transl_table=11 NSLJ01000047.1 Genbank gene 14644 15756 . - . ID=gene-CLI86_12650;Name=CLI86_12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12650 NSLJ01000047.1 Protein Homology CDS 14644 15756 . - 0 ID=cds-PDP42590.1;Parent=gene-CLI86_12650;Dbxref=NCBI_GP:PDP42590.1;Name=PDP42590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018666224.1;locus_tag=CLI86_12650;product=peptide chain release factor 1;protein_id=PDP42590.1;transl_table=11 NSLJ01000047.1 Genbank gene 15811 16977 . - . ID=gene-CLI86_12655;Name=CLI86_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12655 NSLJ01000047.1 Protein Homology CDS 15811 16977 . - 0 ID=cds-PDP42591.1;Parent=gene-CLI86_12655;Dbxref=NCBI_GP:PDP42591.1;Name=PDP42591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098196.1;locus_tag=CLI86_12655;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=PDP42591.1;transl_table=11 NSLJ01000047.1 Genbank gene 16974 17639 . - . ID=gene-CLI86_12660;Name=CLI86_12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12660 NSLJ01000047.1 Protein Homology CDS 16974 17639 . - 0 ID=cds-PDP42593.1;Parent=gene-CLI86_12660;Dbxref=NCBI_GP:PDP42593.1;Name=PDP42593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007653892.1;locus_tag=CLI86_12660;product=hypothetical protein;protein_id=PDP42593.1;transl_table=11 NSLJ01000047.1 Genbank gene 17719 18690 . - . ID=gene-CLI86_12665;Name=CLI86_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12665 NSLJ01000047.1 Protein Homology CDS 17719 18690 . - 0 ID=cds-PDP42592.1;Parent=gene-CLI86_12665;Dbxref=NCBI_GP:PDP42592.1;Name=PDP42592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224736.1;locus_tag=CLI86_12665;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP42592.1;transl_table=11 NSLJ01000047.1 Genbank gene 18693 18899 . - . ID=gene-CLI86_12670;Name=CLI86_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12670 NSLJ01000047.1 Protein Homology CDS 18693 18899 . - 0 ID=cds-PDP42594.1;Parent=gene-CLI86_12670;Dbxref=NCBI_GP:PDP42594.1;Name=PDP42594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_12670;product=hypothetical protein;protein_id=PDP42594.1;transl_table=11 ##sequence-region NSLJ01000048.1 1 17455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000048.1 Genbank region 1 17455 . + . ID=NSLJ01000048.1:1..17455;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000048.1 Genbank gene 1 251 . + . ID=gene-CLI86_12675;Name=CLI86_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12675;partial=true;start_range=.,1 NSLJ01000048.1 Protein Homology CDS 1 251 . + 2 ID=cds-PDP42558.1;Parent=gene-CLI86_12675;Dbxref=NCBI_GP:PDP42558.1;Name=PDP42558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_12675;partial=true;product=hypothetical protein;protein_id=PDP42558.1;start_range=.,1;transl_table=11 NSLJ01000048.1 Genbank gene 268 1053 . + . ID=gene-CLI86_12680;Name=CLI86_12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12680 NSLJ01000048.1 Protein Homology CDS 268 1053 . + 0 ID=cds-PDP42559.1;Parent=gene-CLI86_12680;Dbxref=NCBI_GP:PDP42559.1;Name=PDP42559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226178.1;locus_tag=CLI86_12680;product=hypothetical protein;protein_id=PDP42559.1;transl_table=11 NSLJ01000048.1 Genbank gene 1071 1484 . + . ID=gene-CLI86_12685;Name=CLI86_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12685 NSLJ01000048.1 GeneMarkS+ CDS 1071 1484 . + 0 ID=cds-PDP42560.1;Parent=gene-CLI86_12685;Dbxref=NCBI_GP:PDP42560.1;Name=PDP42560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12685;product=hypothetical protein;protein_id=PDP42560.1;transl_table=11 NSLJ01000048.1 Genbank gene 1448 2653 . + . ID=gene-CLI86_12690;Name=CLI86_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12690 NSLJ01000048.1 Protein Homology CDS 1448 2653 . + 0 ID=cds-PDP42561.1;Parent=gene-CLI86_12690;Dbxref=NCBI_GP:PDP42561.1;Name=PDP42561.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04932.13;locus_tag=CLI86_12690;product=O-antigen polymerase;protein_id=PDP42561.1;transl_table=11 NSLJ01000048.1 Genbank gene 2699 4795 . + . ID=gene-CLI86_12695;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CLI86_12695 NSLJ01000048.1 Protein Homology CDS 2699 4795 . + 0 ID=cds-PDP42562.1;Parent=gene-CLI86_12695;Dbxref=NCBI_GP:PDP42562.1;Name=PDP42562.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155434.1;locus_tag=CLI86_12695;product=DNA primase;protein_id=PDP42562.1;transl_table=11 NSLJ01000048.1 Genbank gene 4801 5724 . + . ID=gene-CLI86_12700;Name=CLI86_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12700 NSLJ01000048.1 Protein Homology CDS 4801 5724 . + 0 ID=cds-PDP42563.1;Parent=gene-CLI86_12700;Dbxref=NCBI_GP:PDP42563.1;Name=PDP42563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226168.1;locus_tag=CLI86_12700;product=ABC transporter ATP-binding protein;protein_id=PDP42563.1;transl_table=11 NSLJ01000048.1 Genbank gene 5721 7007 . + . ID=gene-CLI86_12705;Name=CLI86_12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12705 NSLJ01000048.1 Protein Homology CDS 5721 7007 . + 0 ID=cds-PDP42564.1;Parent=gene-CLI86_12705;Dbxref=NCBI_GP:PDP42564.1;Name=PDP42564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018235.1;locus_tag=CLI86_12705;product=ABC transporter permease;protein_id=PDP42564.1;transl_table=11 NSLJ01000048.1 Genbank gene 7066 8346 . + . ID=gene-CLI86_12710;Name=CLI86_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12710 NSLJ01000048.1 Protein Homology CDS 7066 8346 . + 0 ID=cds-PDP42565.1;Parent=gene-CLI86_12710;Dbxref=NCBI_GP:PDP42565.1;Name=PDP42565.1;Note=catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226166.1;locus_tag=CLI86_12710;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=PDP42565.1;transl_table=11 NSLJ01000048.1 Genbank gene 8627 9220 . - . ID=gene-CLI86_12715;Name=CLI86_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12715 NSLJ01000048.1 Protein Homology CDS 8627 9220 . - 0 ID=cds-PDP42566.1;Parent=gene-CLI86_12715;Dbxref=NCBI_GP:PDP42566.1;Name=PDP42566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009276766.1;locus_tag=CLI86_12715;product=hypothetical protein;protein_id=PDP42566.1;transl_table=11 NSLJ01000048.1 Genbank gene 9336 10649 . - . ID=gene-CLI86_12720;Name=CLI86_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12720 NSLJ01000048.1 Protein Homology CDS 9336 10649 . - 0 ID=cds-PDP42567.1;Parent=gene-CLI86_12720;Dbxref=NCBI_GP:PDP42567.1;Name=PDP42567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643749.1;locus_tag=CLI86_12720;product=aminotransferase;protein_id=PDP42567.1;transl_table=11 NSLJ01000048.1 Genbank gene 10652 12010 . - . ID=gene-CLI86_12725;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CLI86_12725 NSLJ01000048.1 Protein Homology CDS 10652 12010 . - 0 ID=cds-PDP42568.1;Parent=gene-CLI86_12725;Dbxref=NCBI_GP:PDP42568.1;Name=PDP42568.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226163.1;locus_tag=CLI86_12725;product=dihydrolipoyl dehydrogenase;protein_id=PDP42568.1;transl_table=11 NSLJ01000048.1 Genbank gene 12155 12337 . + . ID=gene-CLI86_12730;Name=CLI86_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12730 NSLJ01000048.1 GeneMarkS+ CDS 12155 12337 . + 0 ID=cds-PDP42569.1;Parent=gene-CLI86_12730;Dbxref=NCBI_GP:PDP42569.1;Name=PDP42569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12730;product=hypothetical protein;protein_id=PDP42569.1;transl_table=11 NSLJ01000048.1 Genbank gene 12328 13533 . + . ID=gene-CLI86_12735;Name=CLI86_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12735 NSLJ01000048.1 Protein Homology CDS 12328 13533 . + 0 ID=cds-PDP42570.1;Parent=gene-CLI86_12735;Dbxref=NCBI_GP:PDP42570.1;Name=PDP42570.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613432.1;locus_tag=CLI86_12735;product=pyridoxal phosphate-dependent aminotransferase;protein_id=PDP42570.1;transl_table=11 NSLJ01000048.1 Genbank gene 13590 14840 . + . ID=gene-CLI86_12740;Name=CLI86_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12740 NSLJ01000048.1 Protein Homology CDS 13590 14840 . + 0 ID=cds-PDP42571.1;Parent=gene-CLI86_12740;Dbxref=NCBI_GP:PDP42571.1;Name=PDP42571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864454.1;locus_tag=CLI86_12740;product=ABC transporter permease;protein_id=PDP42571.1;transl_table=11 NSLJ01000048.1 Genbank gene 14980 15888 . - . ID=gene-CLI86_12745;Name=CLI86_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12745 NSLJ01000048.1 Protein Homology CDS 14980 15888 . - 0 ID=cds-PDP42572.1;Parent=gene-CLI86_12745;Dbxref=NCBI_GP:PDP42572.1;Name=PDP42572.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226159.1;locus_tag=CLI86_12745;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=PDP42572.1;transl_table=11 NSLJ01000048.1 Genbank gene 15901 17229 . - . ID=gene-CLI86_12750;Name=CLI86_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12750 NSLJ01000048.1 Protein Homology CDS 15901 17229 . - 0 ID=cds-PDP42573.1;Parent=gene-CLI86_12750;Dbxref=NCBI_GP:PDP42573.1;Name=PDP42573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654088.1;locus_tag=CLI86_12750;product=signal recognition particle protein;protein_id=PDP42573.1;transl_table=11 NSLJ01000048.1 Genbank gene 17222 17425 . - . ID=gene-CLI86_12755;Name=CLI86_12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12755 NSLJ01000048.1 Protein Homology CDS 17222 17425 . - 0 ID=cds-PDP42574.1;Parent=gene-CLI86_12755;Dbxref=NCBI_GP:PDP42574.1;Name=PDP42574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226157.1;locus_tag=CLI86_12755;product=hypothetical protein;protein_id=PDP42574.1;transl_table=11 ##sequence-region NSLJ01000049.1 1 16897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000049.1 Genbank region 1 16897 . + . ID=NSLJ01000049.1:1..16897;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000049.1 Genbank gene 102 518 . - . ID=gene-CLI86_12760;Name=CLI86_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12760 NSLJ01000049.1 Protein Homology CDS 102 518 . - 0 ID=cds-PDP42356.1;Parent=gene-CLI86_12760;Dbxref=NCBI_GP:PDP42356.1;Name=PDP42356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364958.1;locus_tag=CLI86_12760;product=hypothetical protein;protein_id=PDP42356.1;transl_table=11 NSLJ01000049.1 Genbank gene 879 1304 . - . ID=gene-CLI86_12765;Name=CLI86_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12765 NSLJ01000049.1 Protein Homology CDS 879 1304 . - 0 ID=cds-PDP42357.1;Parent=gene-CLI86_12765;Dbxref=NCBI_GP:PDP42357.1;Name=PDP42357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014709468.1;locus_tag=CLI86_12765;product=hypothetical protein;protein_id=PDP42357.1;transl_table=11 NSLJ01000049.1 Genbank pseudogene 1274 2197 . - . ID=gene-CLI86_12770;Name=CLI86_12770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12770;pseudo=true NSLJ01000049.1 Protein Homology CDS 1274 2197 . - 0 ID=cds-CLI86_12770;Parent=gene-CLI86_12770;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708609.1;locus_tag=CLI86_12770;product=IS982 family transposase;pseudo=true;transl_table=11 NSLJ01000049.1 Genbank gene 2302 3540 . - . ID=gene-CLI86_12775;Name=CLI86_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12775 NSLJ01000049.1 Protein Homology CDS 2302 3540 . - 0 ID=cds-PDP42358.1;Parent=gene-CLI86_12775;Dbxref=NCBI_GP:PDP42358.1;Name=PDP42358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004301358.1;locus_tag=CLI86_12775;product=hypothetical protein;protein_id=PDP42358.1;transl_table=11 NSLJ01000049.1 Genbank gene 3530 5812 . - . ID=gene-CLI86_12780;Name=CLI86_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12780 NSLJ01000049.1 Protein Homology CDS 3530 5812 . - 0 ID=cds-PDP42359.1;Parent=gene-CLI86_12780;Dbxref=NCBI_GP:PDP42359.1;Name=PDP42359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272703.1;locus_tag=CLI86_12780;product=ATP-binding protein;protein_id=PDP42359.1;transl_table=11 NSLJ01000049.1 Genbank gene 5814 7088 . - . ID=gene-CLI86_12785;Name=CLI86_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12785 NSLJ01000049.1 Protein Homology CDS 5814 7088 . - 0 ID=cds-PDP42368.1;Parent=gene-CLI86_12785;Dbxref=NCBI_GP:PDP42368.1;Name=PDP42368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016272702.1;locus_tag=CLI86_12785;product=SAM-dependent methyltransferase;protein_id=PDP42368.1;transl_table=11 NSLJ01000049.1 Genbank gene 7473 8714 . - . ID=gene-CLI86_12790;Name=CLI86_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12790 NSLJ01000049.1 Protein Homology CDS 7473 8714 . - 0 ID=cds-PDP42360.1;Parent=gene-CLI86_12790;Dbxref=NCBI_GP:PDP42360.1;Name=PDP42360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227816.1;locus_tag=CLI86_12790;product=virulence protein;protein_id=PDP42360.1;transl_table=11 NSLJ01000049.1 Genbank pseudogene 9327 9616 . + . ID=gene-CLI86_12795;Name=CLI86_12795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12795;pseudo=true NSLJ01000049.1 Protein Homology CDS 9327 9616 . + 0 ID=cds-CLI86_12795;Parent=gene-CLI86_12795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004342103.1;locus_tag=CLI86_12795;product=multidrug DMT transporter permease;pseudo=true;transl_table=11 NSLJ01000049.1 Genbank gene 9613 9918 . + . ID=gene-CLI86_12800;Name=CLI86_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12800 NSLJ01000049.1 Protein Homology CDS 9613 9918 . + 0 ID=cds-PDP42361.1;Parent=gene-CLI86_12800;Dbxref=NCBI_GP:PDP42361.1;Name=PDP42361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845322.1;locus_tag=CLI86_12800;product=DNA-binding protein;protein_id=PDP42361.1;transl_table=11 NSLJ01000049.1 Genbank gene 10024 10929 . - . ID=gene-CLI86_12805;Name=CLI86_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12805 NSLJ01000049.1 Protein Homology CDS 10024 10929 . - 0 ID=cds-PDP42362.1;Parent=gene-CLI86_12805;Dbxref=NCBI_GP:PDP42362.1;Name=PDP42362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911038.1;locus_tag=CLI86_12805;product=AraC family transcriptional regulator;protein_id=PDP42362.1;transl_table=11 NSLJ01000049.1 Genbank gene 11049 11501 . + . ID=gene-CLI86_12810;Name=CLI86_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12810 NSLJ01000049.1 Protein Homology CDS 11049 11501 . + 0 ID=cds-PDP42363.1;Parent=gene-CLI86_12810;Dbxref=NCBI_GP:PDP42363.1;Name=PDP42363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009388372.1;locus_tag=CLI86_12810;product=cupin domain-containing protein;protein_id=PDP42363.1;transl_table=11 NSLJ01000049.1 Genbank pseudogene 11514 12277 . + . ID=gene-CLI86_12815;Name=CLI86_12815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12815;pseudo=true NSLJ01000049.1 Protein Homology CDS 11514 12277 . + 0 ID=cds-CLI86_12815;Parent=gene-CLI86_12815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911040.1;locus_tag=CLI86_12815;product=Zn-dependent hydrolase;pseudo=true;transl_table=11 NSLJ01000049.1 Genbank gene 12295 13197 . + . ID=gene-CLI86_12820;Name=CLI86_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12820 NSLJ01000049.1 Protein Homology CDS 12295 13197 . + 0 ID=cds-PDP42364.1;Parent=gene-CLI86_12820;Dbxref=NCBI_GP:PDP42364.1;Name=PDP42364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384412.1;locus_tag=CLI86_12820;product=radical SAM mobile pair protein B;protein_id=PDP42364.1;transl_table=11 NSLJ01000049.1 Genbank gene 13416 13820 . - . ID=gene-CLI86_12825;Name=CLI86_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12825 NSLJ01000049.1 Protein Homology CDS 13416 13820 . - 0 ID=cds-PDP42365.1;Parent=gene-CLI86_12825;Dbxref=NCBI_GP:PDP42365.1;Name=PDP42365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354667.1;locus_tag=CLI86_12825;product=hypothetical protein;protein_id=PDP42365.1;transl_table=11 NSLJ01000049.1 Genbank gene 13817 15058 . - . ID=gene-CLI86_12830;Name=CLI86_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12830 NSLJ01000049.1 Protein Homology CDS 13817 15058 . - 0 ID=cds-PDP42366.1;Parent=gene-CLI86_12830;Dbxref=NCBI_GP:PDP42366.1;Name=PDP42366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354655.1;locus_tag=CLI86_12830;product=integrase;protein_id=PDP42366.1;transl_table=11 NSLJ01000049.1 Genbank gene 15071 16300 . - . ID=gene-CLI86_12835;Name=CLI86_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12835 NSLJ01000049.1 Protein Homology CDS 15071 16300 . - 0 ID=cds-PDP42367.1;Parent=gene-CLI86_12835;Dbxref=NCBI_GP:PDP42367.1;Name=PDP42367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911044.1;locus_tag=CLI86_12835;product=integrase;protein_id=PDP42367.1;transl_table=11 NSLJ01000049.1 Genbank gene 16789 16897 . - . ID=gene-CLI86_12840;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI86_12840 NSLJ01000049.1 cmsearch rRNA 16789 16897 . - . ID=rna-CLI86_12840;Parent=gene-CLI86_12840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_12840;product=5S ribosomal RNA NSLJ01000049.1 cmsearch exon 16789 16897 . - . ID=exon-CLI86_12840-1;Parent=rna-CLI86_12840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_12840;product=5S ribosomal RNA ##sequence-region NSLJ01000004.1 1 133743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000004.1 Genbank region 1 133743 . + . ID=NSLJ01000004.1:1..133743;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000004.1 Genbank pseudogene 1 136 . - . ID=gene-CLI86_01990;Name=CLI86_01990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_01990;pseudo=true NSLJ01000004.1 Protein Homology CDS 1 136 . - 0 ID=cds-CLI86_01990;Parent=gene-CLI86_01990;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_01990;product=IS1595 family transposase;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank gene 167 490 . - . ID=gene-CLI86_01995;Name=CLI86_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_01995 NSLJ01000004.1 GeneMarkS+ CDS 167 490 . - 0 ID=cds-PDP44675.1;Parent=gene-CLI86_01995;Dbxref=NCBI_GP:PDP44675.1;Name=PDP44675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_01995;product=hypothetical protein;protein_id=PDP44675.1;transl_table=11 NSLJ01000004.1 Genbank pseudogene 481 1092 . - . ID=gene-CLI86_02000;Name=CLI86_02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02000;pseudo=true NSLJ01000004.1 Protein Homology CDS 481 1092 . - 0 ID=cds-CLI86_02000;Parent=gene-CLI86_02000;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006952086.1;locus_tag=CLI86_02000;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank pseudogene 1079 1597 . - . ID=gene-CLI86_02005;Name=CLI86_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02005;pseudo=true NSLJ01000004.1 Protein Homology CDS 1079 1597 . - 0 ID=cds-CLI86_02005;Parent=gene-CLI86_02005;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002671287.1;locus_tag=CLI86_02005;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank gene 2424 3392 . - . ID=gene-CLI86_02010;Name=CLI86_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02010 NSLJ01000004.1 Protein Homology CDS 2424 3392 . - 0 ID=cds-PDP44676.1;Parent=gene-CLI86_02010;Dbxref=NCBI_GP:PDP44676.1;Name=PDP44676.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01609.19;locus_tag=CLI86_02010;product=IS5/IS1182 family transposase;protein_id=PDP44676.1;transl_table=11 NSLJ01000004.1 Genbank gene 3733 4329 . + . ID=gene-CLI86_02015;Name=CLI86_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02015 NSLJ01000004.1 Protein Homology CDS 3733 4329 . + 0 ID=cds-PDP44780.1;Parent=gene-CLI86_02015;Dbxref=NCBI_GP:PDP44780.1;Name=PDP44780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646011.1;locus_tag=CLI86_02015;product=PorT family protein;protein_id=PDP44780.1;transl_table=11 NSLJ01000004.1 Genbank gene 4356 6818 . + . ID=gene-CLI86_02020;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CLI86_02020 NSLJ01000004.1 Protein Homology CDS 4356 6818 . + 0 ID=cds-PDP44677.1;Parent=gene-CLI86_02020;Dbxref=NCBI_GP:PDP44677.1;Name=PDP44677.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226258.1;locus_tag=CLI86_02020;product=primosomal protein N';protein_id=PDP44677.1;transl_table=11 NSLJ01000004.1 Genbank gene 6981 8969 . + . ID=gene-CLI86_02025;Name=CLI86_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02025 NSLJ01000004.1 Protein Homology CDS 6981 8969 . + 0 ID=cds-PDP44678.1;Parent=gene-CLI86_02025;Dbxref=NCBI_GP:PDP44678.1;Name=PDP44678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865897.1;locus_tag=CLI86_02025;product=glucosamine-6-phosphate deaminase;protein_id=PDP44678.1;transl_table=11 NSLJ01000004.1 Genbank gene 9013 9909 . + . ID=gene-CLI86_02030;Name=CLI86_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02030 NSLJ01000004.1 Protein Homology CDS 9013 9909 . + 0 ID=cds-PDP44679.1;Parent=gene-CLI86_02030;Dbxref=NCBI_GP:PDP44679.1;Name=PDP44679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226255.1;locus_tag=CLI86_02030;product=transporter;protein_id=PDP44679.1;transl_table=11 NSLJ01000004.1 Genbank gene 10554 11222 . - . ID=gene-CLI86_02035;Name=CLI86_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02035 NSLJ01000004.1 Protein Homology CDS 10554 11222 . - 0 ID=cds-PDP44680.1;Parent=gene-CLI86_02035;Dbxref=NCBI_GP:PDP44680.1;Name=PDP44680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00717.21;locus_tag=CLI86_02035;product=hypothetical protein;protein_id=PDP44680.1;transl_table=11 NSLJ01000004.1 Genbank pseudogene 11388 11714 . + . ID=gene-CLI86_02040;Name=CLI86_02040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02040;pseudo=true NSLJ01000004.1 Protein Homology CDS 11388 11714 . + 0 ID=cds-CLI86_02040;Parent=gene-CLI86_02040;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015179981.1;locus_tag=CLI86_02040;product=phage antirepressor protein;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank gene 11992 12291 . + . ID=gene-CLI86_02045;Name=CLI86_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02045 NSLJ01000004.1 GeneMarkS+ CDS 11992 12291 . + 0 ID=cds-PDP44681.1;Parent=gene-CLI86_02045;Dbxref=NCBI_GP:PDP44681.1;Name=PDP44681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02045;product=hypothetical protein;protein_id=PDP44681.1;transl_table=11 NSLJ01000004.1 Genbank gene 12278 12460 . + . ID=gene-CLI86_02050;Name=CLI86_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02050 NSLJ01000004.1 GeneMarkS+ CDS 12278 12460 . + 0 ID=cds-PDP44682.1;Parent=gene-CLI86_02050;Dbxref=NCBI_GP:PDP44682.1;Name=PDP44682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02050;product=hypothetical protein;protein_id=PDP44682.1;transl_table=11 NSLJ01000004.1 Genbank gene 12457 12708 . + . ID=gene-CLI86_02055;Name=CLI86_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02055 NSLJ01000004.1 GeneMarkS+ CDS 12457 12708 . + 0 ID=cds-PDP44683.1;Parent=gene-CLI86_02055;Dbxref=NCBI_GP:PDP44683.1;Name=PDP44683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02055;product=hypothetical protein;protein_id=PDP44683.1;transl_table=11 NSLJ01000004.1 Genbank gene 12705 12911 . + . ID=gene-CLI86_02060;Name=CLI86_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02060 NSLJ01000004.1 GeneMarkS+ CDS 12705 12911 . + 0 ID=cds-PDP44684.1;Parent=gene-CLI86_02060;Dbxref=NCBI_GP:PDP44684.1;Name=PDP44684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02060;product=hypothetical protein;protein_id=PDP44684.1;transl_table=11 NSLJ01000004.1 Genbank gene 12978 13286 . + . ID=gene-CLI86_02065;Name=CLI86_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02065 NSLJ01000004.1 GeneMarkS+ CDS 12978 13286 . + 0 ID=cds-PDP44685.1;Parent=gene-CLI86_02065;Dbxref=NCBI_GP:PDP44685.1;Name=PDP44685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02065;product=hypothetical protein;protein_id=PDP44685.1;transl_table=11 NSLJ01000004.1 Genbank gene 13564 15567 . + . ID=gene-CLI86_02070;Name=CLI86_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02070 NSLJ01000004.1 GeneMarkS+ CDS 13564 15567 . + 0 ID=cds-PDP44686.1;Parent=gene-CLI86_02070;Dbxref=NCBI_GP:PDP44686.1;Name=PDP44686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02070;product=hypothetical protein;protein_id=PDP44686.1;transl_table=11 NSLJ01000004.1 Genbank gene 15584 16462 . + . ID=gene-CLI86_02075;Name=CLI86_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02075 NSLJ01000004.1 Protein Homology CDS 15584 16462 . + 0 ID=cds-PDP44687.1;Parent=gene-CLI86_02075;Dbxref=NCBI_GP:PDP44687.1;Name=PDP44687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005798313.1;locus_tag=CLI86_02075;product=AAA family ATPase;protein_id=PDP44687.1;transl_table=11 NSLJ01000004.1 Genbank gene 16459 17085 . + . ID=gene-CLI86_02080;Name=CLI86_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02080 NSLJ01000004.1 GeneMarkS+ CDS 16459 17085 . + 0 ID=cds-PDP44688.1;Parent=gene-CLI86_02080;Dbxref=NCBI_GP:PDP44688.1;Name=PDP44688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02080;product=hypothetical protein;protein_id=PDP44688.1;transl_table=11 NSLJ01000004.1 Genbank gene 17110 17559 . + . ID=gene-CLI86_02085;Name=CLI86_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02085 NSLJ01000004.1 GeneMarkS+ CDS 17110 17559 . + 0 ID=cds-PDP44689.1;Parent=gene-CLI86_02085;Dbxref=NCBI_GP:PDP44689.1;Name=PDP44689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02085;product=hypothetical protein;protein_id=PDP44689.1;transl_table=11 NSLJ01000004.1 Genbank gene 17585 17872 . + . ID=gene-CLI86_02090;Name=CLI86_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02090 NSLJ01000004.1 GeneMarkS+ CDS 17585 17872 . + 0 ID=cds-PDP44690.1;Parent=gene-CLI86_02090;Dbxref=NCBI_GP:PDP44690.1;Name=PDP44690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02090;product=hypothetical protein;protein_id=PDP44690.1;transl_table=11 NSLJ01000004.1 Genbank gene 17874 18071 . + . ID=gene-CLI86_02095;Name=CLI86_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02095 NSLJ01000004.1 GeneMarkS+ CDS 17874 18071 . + 0 ID=cds-PDP44691.1;Parent=gene-CLI86_02095;Dbxref=NCBI_GP:PDP44691.1;Name=PDP44691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02095;product=hypothetical protein;protein_id=PDP44691.1;transl_table=11 NSLJ01000004.1 Genbank gene 18071 18262 . + . ID=gene-CLI86_02100;Name=CLI86_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02100 NSLJ01000004.1 GeneMarkS+ CDS 18071 18262 . + 0 ID=cds-PDP44692.1;Parent=gene-CLI86_02100;Dbxref=NCBI_GP:PDP44692.1;Name=PDP44692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02100;product=hypothetical protein;protein_id=PDP44692.1;transl_table=11 NSLJ01000004.1 Genbank gene 18375 19025 . + . ID=gene-CLI86_02105;Name=CLI86_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02105 NSLJ01000004.1 Protein Homology CDS 18375 19025 . + 0 ID=cds-PDP44781.1;Parent=gene-CLI86_02105;Dbxref=NCBI_GP:PDP44781.1;Name=PDP44781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007562527.1;locus_tag=CLI86_02105;product=DUF3164 domain-containing protein;protein_id=PDP44781.1;transl_table=11 NSLJ01000004.1 Genbank gene 19027 19371 . + . ID=gene-CLI86_02110;Name=CLI86_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02110 NSLJ01000004.1 Protein Homology CDS 19027 19371 . + 0 ID=cds-PDP44693.1;Parent=gene-CLI86_02110;Dbxref=NCBI_GP:PDP44693.1;Name=PDP44693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08299.9;locus_tag=CLI86_02110;product=hypothetical protein;protein_id=PDP44693.1;transl_table=11 NSLJ01000004.1 Genbank pseudogene 19368 19676 . + . ID=gene-CLI86_02115;Name=CLI86_02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02115;pseudo=true NSLJ01000004.1 Protein Homology CDS 19368 19676 . + 0 ID=cds-CLI86_02115;Parent=gene-CLI86_02115;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099597.1;locus_tag=CLI86_02115;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank gene 20053 20412 . + . ID=gene-CLI86_02120;Name=CLI86_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02120 NSLJ01000004.1 GeneMarkS+ CDS 20053 20412 . + 0 ID=cds-PDP44694.1;Parent=gene-CLI86_02120;Dbxref=NCBI_GP:PDP44694.1;Name=PDP44694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02120;product=hypothetical protein;protein_id=PDP44694.1;transl_table=11 NSLJ01000004.1 Genbank gene 20454 20795 . + . ID=gene-CLI86_02125;Name=CLI86_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02125 NSLJ01000004.1 GeneMarkS+ CDS 20454 20795 . + 0 ID=cds-PDP44695.1;Parent=gene-CLI86_02125;Dbxref=NCBI_GP:PDP44695.1;Name=PDP44695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02125;product=hypothetical protein;protein_id=PDP44695.1;transl_table=11 NSLJ01000004.1 Genbank gene 20810 21256 . - . ID=gene-CLI86_02130;Name=CLI86_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02130 NSLJ01000004.1 GeneMarkS+ CDS 20810 21256 . - 0 ID=cds-PDP44696.1;Parent=gene-CLI86_02130;Dbxref=NCBI_GP:PDP44696.1;Name=PDP44696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02130;product=hypothetical protein;protein_id=PDP44696.1;transl_table=11 NSLJ01000004.1 Genbank gene 21275 21778 . - . ID=gene-CLI86_02135;Name=CLI86_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02135 NSLJ01000004.1 Protein Homology CDS 21275 21778 . - 0 ID=cds-PDP44697.1;Parent=gene-CLI86_02135;Dbxref=NCBI_GP:PDP44697.1;Name=PDP44697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006044839.1;locus_tag=CLI86_02135;product=hypothetical protein;protein_id=PDP44697.1;transl_table=11 NSLJ01000004.1 Genbank gene 21934 24495 . - . ID=gene-CLI86_02140;Name=CLI86_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02140 NSLJ01000004.1 Protein Homology CDS 21934 24495 . - 0 ID=cds-PDP44698.1;Parent=gene-CLI86_02140;Dbxref=NCBI_GP:PDP44698.1;Name=PDP44698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009122604.1;locus_tag=CLI86_02140;product=phage head morphogenesis protein;protein_id=PDP44698.1;transl_table=11 NSLJ01000004.1 Genbank gene 24516 24938 . - . ID=gene-CLI86_02145;Name=CLI86_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02145 NSLJ01000004.1 Protein Homology CDS 24516 24938 . - 0 ID=cds-PDP44699.1;Parent=gene-CLI86_02145;Dbxref=NCBI_GP:PDP44699.1;Name=PDP44699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611120.1;locus_tag=CLI86_02145;product=DUF1320 domain-containing protein;protein_id=PDP44699.1;transl_table=11 NSLJ01000004.1 Genbank gene 24986 26596 . - . ID=gene-CLI86_02150;Name=CLI86_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02150 NSLJ01000004.1 Protein Homology CDS 24986 26596 . - 0 ID=cds-PDP44700.1;Parent=gene-CLI86_02150;Dbxref=NCBI_GP:PDP44700.1;Name=PDP44700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005779449.1;locus_tag=CLI86_02150;product=hypothetical protein;protein_id=PDP44700.1;transl_table=11 NSLJ01000004.1 Genbank gene 26593 27054 . - . ID=gene-CLI86_02155;Name=CLI86_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02155 NSLJ01000004.1 Protein Homology CDS 26593 27054 . - 0 ID=cds-PDP44701.1;Parent=gene-CLI86_02155;Dbxref=NCBI_GP:PDP44701.1;Name=PDP44701.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06056.10;locus_tag=CLI86_02155;product=hypothetical protein;protein_id=PDP44701.1;transl_table=11 NSLJ01000004.1 Genbank gene 27238 28335 . + . ID=gene-CLI86_02160;Name=CLI86_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02160 NSLJ01000004.1 Protein Homology CDS 27238 28335 . + 0 ID=cds-PDP44702.1;Parent=gene-CLI86_02160;Dbxref=NCBI_GP:PDP44702.1;Name=PDP44702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00574.21;locus_tag=CLI86_02160;product=hypothetical protein;protein_id=PDP44702.1;transl_table=11 NSLJ01000004.1 Genbank gene 28375 29397 . + . ID=gene-CLI86_02165;Name=CLI86_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02165 NSLJ01000004.1 Protein Homology CDS 28375 29397 . + 0 ID=cds-PDP44703.1;Parent=gene-CLI86_02165;Dbxref=NCBI_GP:PDP44703.1;Name=PDP44703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009122599.1;locus_tag=CLI86_02165;product=hypothetical protein;protein_id=PDP44703.1;transl_table=11 NSLJ01000004.1 Genbank gene 29406 29900 . + . ID=gene-CLI86_02170;Name=CLI86_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02170 NSLJ01000004.1 GeneMarkS+ CDS 29406 29900 . + 0 ID=cds-PDP44704.1;Parent=gene-CLI86_02170;Dbxref=NCBI_GP:PDP44704.1;Name=PDP44704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02170;product=hypothetical protein;protein_id=PDP44704.1;transl_table=11 NSLJ01000004.1 Genbank gene 29998 30528 . + . ID=gene-CLI86_02175;Name=CLI86_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02175 NSLJ01000004.1 Protein Homology CDS 29998 30528 . + 0 ID=cds-PDP44782.1;Parent=gene-CLI86_02175;Dbxref=NCBI_GP:PDP44782.1;Name=PDP44782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019152254.1;locus_tag=CLI86_02175;product=flagellar biosynthesis protein FlgJ;protein_id=PDP44782.1;transl_table=11 NSLJ01000004.1 Genbank gene 30528 31022 . + . ID=gene-CLI86_02180;Name=CLI86_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02180 NSLJ01000004.1 GeneMarkS+ CDS 30528 31022 . + 0 ID=cds-PDP44705.1;Parent=gene-CLI86_02180;Dbxref=NCBI_GP:PDP44705.1;Name=PDP44705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02180;product=hypothetical protein;protein_id=PDP44705.1;transl_table=11 NSLJ01000004.1 Genbank gene 30997 31251 . + . ID=gene-CLI86_02185;Name=CLI86_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02185 NSLJ01000004.1 GeneMarkS+ CDS 30997 31251 . + 0 ID=cds-PDP44706.1;Parent=gene-CLI86_02185;Dbxref=NCBI_GP:PDP44706.1;Name=PDP44706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02185;product=hypothetical protein;protein_id=PDP44706.1;transl_table=11 NSLJ01000004.1 Genbank gene 31254 31805 . + . ID=gene-CLI86_02190;Name=CLI86_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02190 NSLJ01000004.1 GeneMarkS+ CDS 31254 31805 . + 0 ID=cds-PDP44707.1;Parent=gene-CLI86_02190;Dbxref=NCBI_GP:PDP44707.1;Name=PDP44707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02190;product=hypothetical protein;protein_id=PDP44707.1;transl_table=11 NSLJ01000004.1 Genbank gene 31811 32299 . + . ID=gene-CLI86_02195;Name=CLI86_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02195 NSLJ01000004.1 GeneMarkS+ CDS 31811 32299 . + 0 ID=cds-PDP44708.1;Parent=gene-CLI86_02195;Dbxref=NCBI_GP:PDP44708.1;Name=PDP44708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02195;product=hypothetical protein;protein_id=PDP44708.1;transl_table=11 NSLJ01000004.1 Genbank gene 32531 35776 . + . ID=gene-CLI86_02200;Name=CLI86_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02200 NSLJ01000004.1 GeneMarkS+ CDS 32531 35776 . + 0 ID=cds-PDP44709.1;Parent=gene-CLI86_02200;Dbxref=NCBI_GP:PDP44709.1;Name=PDP44709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02200;product=hypothetical protein;protein_id=PDP44709.1;transl_table=11 NSLJ01000004.1 Genbank gene 35776 36600 . + . ID=gene-CLI86_02205;Name=CLI86_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02205 NSLJ01000004.1 GeneMarkS+ CDS 35776 36600 . + 0 ID=cds-PDP44710.1;Parent=gene-CLI86_02205;Dbxref=NCBI_GP:PDP44710.1;Name=PDP44710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02205;product=hypothetical protein;protein_id=PDP44710.1;transl_table=11 NSLJ01000004.1 Genbank gene 36597 39725 . + . ID=gene-CLI86_02210;Name=CLI86_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02210 NSLJ01000004.1 GeneMarkS+ CDS 36597 39725 . + 0 ID=cds-PDP44711.1;Parent=gene-CLI86_02210;Dbxref=NCBI_GP:PDP44711.1;Name=PDP44711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02210;product=hypothetical protein;protein_id=PDP44711.1;transl_table=11 NSLJ01000004.1 Genbank gene 39735 40016 . + . ID=gene-CLI86_02215;Name=CLI86_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02215 NSLJ01000004.1 GeneMarkS+ CDS 39735 40016 . + 0 ID=cds-PDP44712.1;Parent=gene-CLI86_02215;Dbxref=NCBI_GP:PDP44712.1;Name=PDP44712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02215;product=hypothetical protein;protein_id=PDP44712.1;transl_table=11 NSLJ01000004.1 Genbank gene 40025 40294 . + . ID=gene-CLI86_02220;Name=CLI86_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02220 NSLJ01000004.1 GeneMarkS+ CDS 40025 40294 . + 0 ID=cds-PDP44713.1;Parent=gene-CLI86_02220;Dbxref=NCBI_GP:PDP44713.1;Name=PDP44713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02220;product=hypothetical protein;protein_id=PDP44713.1;transl_table=11 NSLJ01000004.1 Genbank gene 40300 40623 . + . ID=gene-CLI86_02225;Name=CLI86_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02225 NSLJ01000004.1 Protein Homology CDS 40300 40623 . + 0 ID=cds-PDP44714.1;Parent=gene-CLI86_02225;Dbxref=NCBI_GP:PDP44714.1;Name=PDP44714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007365045.1;locus_tag=CLI86_02225;product=hypothetical protein;protein_id=PDP44714.1;transl_table=11 NSLJ01000004.1 Genbank gene 40630 40971 . + . ID=gene-CLI86_02230;Name=CLI86_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02230 NSLJ01000004.1 GeneMarkS+ CDS 40630 40971 . + 0 ID=cds-PDP44715.1;Parent=gene-CLI86_02230;Dbxref=NCBI_GP:PDP44715.1;Name=PDP44715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02230;product=hypothetical protein;protein_id=PDP44715.1;transl_table=11 NSLJ01000004.1 Genbank gene 40982 42175 . + . ID=gene-CLI86_02235;Name=CLI86_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02235 NSLJ01000004.1 Protein Homology CDS 40982 42175 . + 0 ID=cds-PDP44716.1;Parent=gene-CLI86_02235;Dbxref=NCBI_GP:PDP44716.1;Name=PDP44716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016069189.1;locus_tag=CLI86_02235;product=hypothetical protein;protein_id=PDP44716.1;transl_table=11 NSLJ01000004.1 Genbank gene 42360 43181 . + . ID=gene-CLI86_02240;Name=CLI86_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02240 NSLJ01000004.1 Protein Homology CDS 42360 43181 . + 0 ID=cds-PDP44717.1;Parent=gene-CLI86_02240;Dbxref=NCBI_GP:PDP44717.1;Name=PDP44717.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02086.13;locus_tag=CLI86_02240;product=methyltransferase;protein_id=PDP44717.1;transl_table=11 NSLJ01000004.1 Genbank gene 43615 44820 . - . ID=gene-CLI86_02245;Name=CLI86_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02245 NSLJ01000004.1 Protein Homology CDS 43615 44820 . - 0 ID=cds-PDP44718.1;Parent=gene-CLI86_02245;Dbxref=NCBI_GP:PDP44718.1;Name=PDP44718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226254.1;locus_tag=CLI86_02245;product=cofactor-independent phosphoglycerate mutase;protein_id=PDP44718.1;transl_table=11 NSLJ01000004.1 Genbank gene 44827 47265 . - . ID=gene-CLI86_02250;Name=CLI86_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02250 NSLJ01000004.1 Protein Homology CDS 44827 47265 . - 0 ID=cds-PDP44719.1;Parent=gene-CLI86_02250;Dbxref=NCBI_GP:PDP44719.1;Name=PDP44719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861780.1;locus_tag=CLI86_02250;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=PDP44719.1;transl_table=11 NSLJ01000004.1 Genbank gene 47506 48870 . - . ID=gene-CLI86_02255;Name=CLI86_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02255 NSLJ01000004.1 Protein Homology CDS 47506 48870 . - 0 ID=cds-PDP44720.1;Parent=gene-CLI86_02255;Dbxref=NCBI_GP:PDP44720.1;Name=PDP44720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226251.1;locus_tag=CLI86_02255;product=hypothetical protein;protein_id=PDP44720.1;transl_table=11 NSLJ01000004.1 Genbank gene 48900 49273 . - . ID=gene-CLI86_02260;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CLI86_02260 NSLJ01000004.1 cmsearch RNase_P_RNA 48900 49273 . - . ID=rna-CLI86_02260;Parent=gene-CLI86_02260;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_02260;product=RNase P RNA component class A NSLJ01000004.1 cmsearch exon 48900 49273 . - . ID=exon-CLI86_02260-1;Parent=rna-CLI86_02260;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_02260;product=RNase P RNA component class A NSLJ01000004.1 Genbank gene 49370 50068 . - . ID=gene-CLI86_02265;Name=CLI86_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02265 NSLJ01000004.1 Protein Homology CDS 49370 50068 . - 0 ID=cds-PDP44721.1;Parent=gene-CLI86_02265;Dbxref=NCBI_GP:PDP44721.1;Name=PDP44721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226250.1;locus_tag=CLI86_02265;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=PDP44721.1;transl_table=11 NSLJ01000004.1 Genbank gene 50098 50721 . - . ID=gene-CLI86_02270;Name=CLI86_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02270 NSLJ01000004.1 Protein Homology CDS 50098 50721 . - 0 ID=cds-PDP44722.1;Parent=gene-CLI86_02270;Dbxref=NCBI_GP:PDP44722.1;Name=PDP44722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226249.1;locus_tag=CLI86_02270;product=hypothetical protein;protein_id=PDP44722.1;transl_table=11 NSLJ01000004.1 Genbank gene 50737 51237 . - . ID=gene-CLI86_02275;Name=CLI86_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02275 NSLJ01000004.1 Protein Homology CDS 50737 51237 . - 0 ID=cds-PDP44723.1;Parent=gene-CLI86_02275;Dbxref=NCBI_GP:PDP44723.1;Name=PDP44723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13905.4;locus_tag=CLI86_02275;product=hypothetical protein;protein_id=PDP44723.1;transl_table=11 NSLJ01000004.1 Genbank gene 51328 52593 . + . ID=gene-CLI86_02280;Name=CLI86_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02280 NSLJ01000004.1 Protein Homology CDS 51328 52593 . + 0 ID=cds-PDP44783.1;Parent=gene-CLI86_02280;Dbxref=NCBI_GP:PDP44783.1;Name=PDP44783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018074825.1;locus_tag=CLI86_02280;product=DUF1080 domain-containing protein;protein_id=PDP44783.1;transl_table=11 NSLJ01000004.1 Genbank gene 52623 53483 . + . ID=gene-CLI86_02285;Name=CLI86_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02285 NSLJ01000004.1 Protein Homology CDS 52623 53483 . + 0 ID=cds-PDP44724.1;Parent=gene-CLI86_02285;Dbxref=NCBI_GP:PDP44724.1;Name=PDP44724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226246.1;locus_tag=CLI86_02285;product=endonuclease;protein_id=PDP44724.1;transl_table=11 NSLJ01000004.1 Genbank gene 53669 54850 . - . ID=gene-CLI86_02290;Name=CLI86_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02290 NSLJ01000004.1 Protein Homology CDS 53669 54850 . - 0 ID=cds-PDP44725.1;Parent=gene-CLI86_02290;Dbxref=NCBI_GP:PDP44725.1;Name=PDP44725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226245.1;locus_tag=CLI86_02290;product=transporter;protein_id=PDP44725.1;transl_table=11 NSLJ01000004.1 Genbank gene 54847 57930 . - . ID=gene-CLI86_02295;Name=CLI86_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02295 NSLJ01000004.1 Protein Homology CDS 54847 57930 . - 0 ID=cds-PDP44726.1;Parent=gene-CLI86_02295;Dbxref=NCBI_GP:PDP44726.1;Name=PDP44726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226244.1;locus_tag=CLI86_02295;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=PDP44726.1;transl_table=11 NSLJ01000004.1 Genbank gene 57944 59188 . - . ID=gene-CLI86_02300;Name=CLI86_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02300 NSLJ01000004.1 Protein Homology CDS 57944 59188 . - 0 ID=cds-PDP44727.1;Parent=gene-CLI86_02300;Dbxref=NCBI_GP:PDP44727.1;Name=PDP44727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226243.1;locus_tag=CLI86_02300;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP44727.1;transl_table=11 NSLJ01000004.1 Genbank gene 59264 59704 . - . ID=gene-CLI86_02305;Name=CLI86_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02305 NSLJ01000004.1 Protein Homology CDS 59264 59704 . - 0 ID=cds-PDP44728.1;Parent=gene-CLI86_02305;Dbxref=NCBI_GP:PDP44728.1;Name=PDP44728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005644096.1;locus_tag=CLI86_02305;product=hypothetical protein;protein_id=PDP44728.1;transl_table=11 NSLJ01000004.1 Genbank gene 59744 60475 . - . ID=gene-CLI86_02310;Name=CLI86_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02310 NSLJ01000004.1 Protein Homology CDS 59744 60475 . - 0 ID=cds-PDP44729.1;Parent=gene-CLI86_02310;Dbxref=NCBI_GP:PDP44729.1;Name=PDP44729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226241.1;locus_tag=CLI86_02310;product=haloacid dehalogenase;protein_id=PDP44729.1;transl_table=11 NSLJ01000004.1 Genbank gene 60472 61392 . - . ID=gene-CLI86_02315;Name=CLI86_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02315 NSLJ01000004.1 Protein Homology CDS 60472 61392 . - 0 ID=cds-PDP44784.1;Parent=gene-CLI86_02315;Dbxref=NCBI_GP:PDP44784.1;Name=PDP44784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226240.1;locus_tag=CLI86_02315;product=CDP-alcohol phosphatidyltransferase;protein_id=PDP44784.1;transl_table=11 NSLJ01000004.1 Genbank gene 61392 62249 . - . ID=gene-CLI86_02320;Name=CLI86_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02320 NSLJ01000004.1 Protein Homology CDS 61392 62249 . - 0 ID=cds-PDP44730.1;Parent=gene-CLI86_02320;Dbxref=NCBI_GP:PDP44730.1;Name=PDP44730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856714.1;locus_tag=CLI86_02320;product=hypothetical protein;protein_id=PDP44730.1;transl_table=11 NSLJ01000004.1 Genbank gene 62289 62984 . - . ID=gene-CLI86_02325;Name=CLI86_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02325 NSLJ01000004.1 Protein Homology CDS 62289 62984 . - 0 ID=cds-PDP44785.1;Parent=gene-CLI86_02325;Dbxref=NCBI_GP:PDP44785.1;Name=PDP44785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005862127.1;locus_tag=CLI86_02325;product=nucleoside-diphosphate-sugar pyrophosphorylase;protein_id=PDP44785.1;transl_table=11 NSLJ01000004.1 Genbank gene 63044 64708 . - . ID=gene-CLI86_02330;Name=CLI86_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02330 NSLJ01000004.1 Protein Homology CDS 63044 64708 . - 0 ID=cds-PDP44731.1;Parent=gene-CLI86_02330;Dbxref=NCBI_GP:PDP44731.1;Name=PDP44731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810142.1;locus_tag=CLI86_02330;product=transporter;protein_id=PDP44731.1;transl_table=11 NSLJ01000004.1 Genbank gene 64884 67433 . + . ID=gene-CLI86_02335;Name=CLI86_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02335 NSLJ01000004.1 Protein Homology CDS 64884 67433 . + 0 ID=cds-PDP44786.1;Parent=gene-CLI86_02335;Dbxref=NCBI_GP:PDP44786.1;Name=PDP44786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013619170.1;locus_tag=CLI86_02335;product=hypothetical protein;protein_id=PDP44786.1;transl_table=11 NSLJ01000004.1 Genbank gene 67525 68106 . + . ID=gene-CLI86_02340;Name=CLI86_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02340 NSLJ01000004.1 Protein Homology CDS 67525 68106 . + 0 ID=cds-PDP44732.1;Parent=gene-CLI86_02340;Dbxref=NCBI_GP:PDP44732.1;Name=PDP44732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226234.1;locus_tag=CLI86_02340;product=hypothetical protein;protein_id=PDP44732.1;transl_table=11 NSLJ01000004.1 Genbank gene 68139 68486 . + . ID=gene-CLI86_02345;Name=CLI86_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02345 NSLJ01000004.1 Protein Homology CDS 68139 68486 . + 0 ID=cds-PDP44733.1;Parent=gene-CLI86_02345;Dbxref=NCBI_GP:PDP44733.1;Name=PDP44733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002664576.1;locus_tag=CLI86_02345;product=lactoylglutathione lyase;protein_id=PDP44733.1;transl_table=11 NSLJ01000004.1 Genbank gene 68529 69992 . + . ID=gene-CLI86_02350;Name=CLI86_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02350 NSLJ01000004.1 Protein Homology CDS 68529 69992 . + 0 ID=cds-PDP44734.1;Parent=gene-CLI86_02350;Dbxref=NCBI_GP:PDP44734.1;Name=PDP44734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226232.1;locus_tag=CLI86_02350;product=flotillin;protein_id=PDP44734.1;transl_table=11 NSLJ01000004.1 Genbank gene 70302 71321 . + . ID=gene-CLI86_02355;Name=CLI86_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02355 NSLJ01000004.1 Protein Homology CDS 70302 71321 . + 0 ID=cds-PDP44735.1;Parent=gene-CLI86_02355;Dbxref=NCBI_GP:PDP44735.1;Name=PDP44735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858291.1;locus_tag=CLI86_02355;product=branched-chain amino acid aminotransferase;protein_id=PDP44735.1;transl_table=11 NSLJ01000004.1 Genbank gene 71406 71909 . + . ID=gene-CLI86_02360;Name=CLI86_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02360 NSLJ01000004.1 GeneMarkS+ CDS 71406 71909 . + 0 ID=cds-PDP44736.1;Parent=gene-CLI86_02360;Dbxref=NCBI_GP:PDP44736.1;Name=PDP44736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02360;product=hypothetical protein;protein_id=PDP44736.1;transl_table=11 NSLJ01000004.1 Genbank gene 72075 73253 . + . ID=gene-CLI86_02365;Name=CLI86_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02365 NSLJ01000004.1 Protein Homology CDS 72075 73253 . + 0 ID=cds-PDP44737.1;Parent=gene-CLI86_02365;Dbxref=NCBI_GP:PDP44737.1;Name=PDP44737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005643832.1;locus_tag=CLI86_02365;product=AAA family ATPase;protein_id=PDP44737.1;transl_table=11 NSLJ01000004.1 Genbank gene 73293 76835 . + . ID=gene-CLI86_02370;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CLI86_02370 NSLJ01000004.1 Protein Homology CDS 73293 76835 . + 0 ID=cds-PDP44738.1;Parent=gene-CLI86_02370;Dbxref=NCBI_GP:PDP44738.1;Name=PDP44738.1;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226227.1;locus_tag=CLI86_02370;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=PDP44738.1;transl_table=11 NSLJ01000004.1 Genbank gene 77213 77560 . - . ID=gene-CLI86_02375;Name=CLI86_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02375 NSLJ01000004.1 GeneMarkS+ CDS 77213 77560 . - 0 ID=cds-PDP44739.1;Parent=gene-CLI86_02375;Dbxref=NCBI_GP:PDP44739.1;Name=PDP44739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02375;product=hypothetical protein;protein_id=PDP44739.1;transl_table=11 NSLJ01000004.1 Genbank gene 77627 77860 . - . ID=gene-CLI86_02380;Name=CLI86_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02380 NSLJ01000004.1 GeneMarkS+ CDS 77627 77860 . - 0 ID=cds-PDP44740.1;Parent=gene-CLI86_02380;Dbxref=NCBI_GP:PDP44740.1;Name=PDP44740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02380;product=hypothetical protein;protein_id=PDP44740.1;transl_table=11 NSLJ01000004.1 Genbank gene 78398 81430 . - . ID=gene-CLI86_02385;Name=CLI86_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02385 NSLJ01000004.1 Protein Homology CDS 78398 81430 . - 0 ID=cds-PDP44741.1;Parent=gene-CLI86_02385;Dbxref=NCBI_GP:PDP44741.1;Name=PDP44741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318445.1;locus_tag=CLI86_02385;product=protein translocase subunit SecDF;protein_id=PDP44741.1;transl_table=11 NSLJ01000004.1 Genbank gene 81720 82595 . - . ID=gene-CLI86_02390;Name=CLI86_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02390 NSLJ01000004.1 Protein Homology CDS 81720 82595 . - 0 ID=cds-PDP44742.1;Parent=gene-CLI86_02390;Dbxref=NCBI_GP:PDP44742.1;Name=PDP44742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855867.1;locus_tag=CLI86_02390;product=NAD kinase;protein_id=PDP44742.1;transl_table=11 NSLJ01000004.1 Genbank gene 82708 83427 . + . ID=gene-CLI86_02395;Name=CLI86_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02395 NSLJ01000004.1 Protein Homology CDS 82708 83427 . + 0 ID=cds-PDP44743.1;Parent=gene-CLI86_02395;Dbxref=NCBI_GP:PDP44743.1;Name=PDP44743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007658772.1;locus_tag=CLI86_02395;product=pyridoxine 5'-phosphate synthase;protein_id=PDP44743.1;transl_table=11 NSLJ01000004.1 Genbank gene 83468 84181 . + . ID=gene-CLI86_02400;Name=CLI86_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02400 NSLJ01000004.1 Protein Homology CDS 83468 84181 . + 0 ID=cds-PDP44744.1;Parent=gene-CLI86_02400;Dbxref=NCBI_GP:PDP44744.1;Name=PDP44744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855862.1;locus_tag=CLI86_02400;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP44744.1;transl_table=11 NSLJ01000004.1 Genbank gene 84187 84606 . + . ID=gene-CLI86_02405;Name=CLI86_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02405 NSLJ01000004.1 Protein Homology CDS 84187 84606 . + 0 ID=cds-PDP44745.1;Parent=gene-CLI86_02405;Dbxref=NCBI_GP:PDP44745.1;Name=PDP44745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226220.1;locus_tag=CLI86_02405;product=biopolymer transporter ExbD;protein_id=PDP44745.1;transl_table=11 NSLJ01000004.1 Genbank gene 84603 85439 . + . ID=gene-CLI86_02410;Name=CLI86_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02410 NSLJ01000004.1 Protein Homology CDS 84603 85439 . + 0 ID=cds-PDP44746.1;Parent=gene-CLI86_02410;Dbxref=NCBI_GP:PDP44746.1;Name=PDP44746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966501.1;locus_tag=CLI86_02410;product=energy transducer TonB;protein_id=PDP44746.1;transl_table=11 NSLJ01000004.1 Genbank gene 85476 86015 . + . ID=gene-CLI86_02415;Name=CLI86_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02415 NSLJ01000004.1 Protein Homology CDS 85476 86015 . + 0 ID=cds-PDP44747.1;Parent=gene-CLI86_02415;Dbxref=NCBI_GP:PDP44747.1;Name=PDP44747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562587.1;locus_tag=CLI86_02415;product=DJ-1 family protein;protein_id=PDP44747.1;transl_table=11 NSLJ01000004.1 Genbank gene 86061 87509 . - . ID=gene-CLI86_02420;Name=CLI86_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02420 NSLJ01000004.1 Protein Homology CDS 86061 87509 . - 0 ID=cds-PDP44748.1;Parent=gene-CLI86_02420;Dbxref=NCBI_GP:PDP44748.1;Name=PDP44748.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00079.18;locus_tag=CLI86_02420;product=serpin family protein;protein_id=PDP44748.1;transl_table=11 NSLJ01000004.1 Genbank gene 87627 90047 . + . ID=gene-CLI86_02425;Name=CLI86_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02425 NSLJ01000004.1 Protein Homology CDS 87627 90047 . + 0 ID=cds-PDP44749.1;Parent=gene-CLI86_02425;Dbxref=NCBI_GP:PDP44749.1;Name=PDP44749.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02018.15;locus_tag=CLI86_02425;product=glycoside hydrolase;protein_id=PDP44749.1;transl_table=11 NSLJ01000004.1 Genbank gene 90191 91642 . - . ID=gene-CLI86_02430;Name=CLI86_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02430 NSLJ01000004.1 Protein Homology CDS 90191 91642 . - 0 ID=cds-PDP44750.1;Parent=gene-CLI86_02430;Dbxref=NCBI_GP:PDP44750.1;Name=PDP44750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226214.1;locus_tag=CLI86_02430;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44750.1;transl_table=11 NSLJ01000004.1 Genbank gene 91663 94704 . - . ID=gene-CLI86_02435;Name=CLI86_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02435 NSLJ01000004.1 Protein Homology CDS 91663 94704 . - 0 ID=cds-PDP44751.1;Parent=gene-CLI86_02435;Dbxref=NCBI_GP:PDP44751.1;Name=PDP44751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226213.1;locus_tag=CLI86_02435;product=TonB-dependent receptor;protein_id=PDP44751.1;transl_table=11 NSLJ01000004.1 Genbank gene 95012 95890 . - . ID=gene-CLI86_02440;Name=CLI86_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02440 NSLJ01000004.1 Protein Homology CDS 95012 95890 . - 0 ID=cds-PDP44752.1;Parent=gene-CLI86_02440;Dbxref=NCBI_GP:PDP44752.1;Name=PDP44752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009017777.1;locus_tag=CLI86_02440;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=PDP44752.1;transl_table=11 NSLJ01000004.1 Genbank gene 95892 97133 . - . ID=gene-CLI86_02445;Name=CLI86_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02445 NSLJ01000004.1 Protein Homology CDS 95892 97133 . - 0 ID=cds-PDP44753.1;Parent=gene-CLI86_02445;Dbxref=NCBI_GP:PDP44753.1;Name=PDP44753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226211.1;locus_tag=CLI86_02445;product=hypothetical protein;protein_id=PDP44753.1;transl_table=11 NSLJ01000004.1 Genbank gene 97145 98323 . - . ID=gene-CLI86_02450;Name=CLI86_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02450 NSLJ01000004.1 Protein Homology CDS 97145 98323 . - 0 ID=cds-PDP44754.1;Parent=gene-CLI86_02450;Dbxref=NCBI_GP:PDP44754.1;Name=PDP44754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018788.1;locus_tag=CLI86_02450;product=ABC transporter permease;protein_id=PDP44754.1;transl_table=11 NSLJ01000004.1 Genbank gene 98334 99326 . - . ID=gene-CLI86_02455;Name=CLI86_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02455 NSLJ01000004.1 Protein Homology CDS 98334 99326 . - 0 ID=cds-PDP44755.1;Parent=gene-CLI86_02455;Dbxref=NCBI_GP:PDP44755.1;Name=PDP44755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009018789.1;locus_tag=CLI86_02455;product=hemolysin secretion protein D;protein_id=PDP44755.1;transl_table=11 NSLJ01000004.1 Genbank gene 99378 100769 . - . ID=gene-CLI86_02460;Name=CLI86_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02460 NSLJ01000004.1 Protein Homology CDS 99378 100769 . - 0 ID=cds-PDP44756.1;Parent=gene-CLI86_02460;Dbxref=NCBI_GP:PDP44756.1;Name=PDP44756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010800132.1;locus_tag=CLI86_02460;product=alkaline protease;protein_id=PDP44756.1;transl_table=11 NSLJ01000004.1 Genbank gene 100866 103379 . - . ID=gene-CLI86_02465;Name=CLI86_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02465 NSLJ01000004.1 Protein Homology CDS 100866 103379 . - 0 ID=cds-PDP44757.1;Parent=gene-CLI86_02465;Dbxref=NCBI_GP:PDP44757.1;Name=PDP44757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634631.1;locus_tag=CLI86_02465;product=glycoside hydrolase;protein_id=PDP44757.1;transl_table=11 NSLJ01000004.1 Genbank gene 103491 105338 . - . ID=gene-CLI86_02470;Name=CLI86_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02470 NSLJ01000004.1 Protein Homology CDS 103491 105338 . - 0 ID=cds-PDP44758.1;Parent=gene-CLI86_02470;Dbxref=NCBI_GP:PDP44758.1;Name=PDP44758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634625.1;locus_tag=CLI86_02470;product=ABC transporter ATP-binding protein;protein_id=PDP44758.1;transl_table=11 NSLJ01000004.1 Genbank gene 105456 106109 . - . ID=gene-CLI86_02475;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_02475 NSLJ01000004.1 Protein Homology CDS 105456 106109 . - 0 ID=cds-PDP44759.1;Parent=gene-CLI86_02475;Dbxref=NCBI_GP:PDP44759.1;Name=PDP44759.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226205.1;locus_tag=CLI86_02475;product=signal peptidase I;protein_id=PDP44759.1;transl_table=11 NSLJ01000004.1 Genbank gene 106128 107651 . - . ID=gene-CLI86_02480;Name=CLI86_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02480 NSLJ01000004.1 Protein Homology CDS 106128 107651 . - 0 ID=cds-PDP44760.1;Parent=gene-CLI86_02480;Dbxref=NCBI_GP:PDP44760.1;Name=PDP44760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226204.1;locus_tag=CLI86_02480;product=mannosyltransferase;protein_id=PDP44760.1;transl_table=11 NSLJ01000004.1 Genbank gene 107617 108231 . - . ID=gene-CLI86_02485;Name=CLI86_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02485 NSLJ01000004.1 GeneMarkS+ CDS 107617 108231 . - 0 ID=cds-PDP44761.1;Parent=gene-CLI86_02485;Dbxref=NCBI_GP:PDP44761.1;Name=PDP44761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02485;product=hypothetical protein;protein_id=PDP44761.1;transl_table=11 NSLJ01000004.1 Genbank gene 108243 109646 . - . ID=gene-CLI86_02490;Name=CLI86_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02490 NSLJ01000004.1 Protein Homology CDS 108243 109646 . - 0 ID=cds-PDP44762.1;Parent=gene-CLI86_02490;Dbxref=NCBI_GP:PDP44762.1;Name=PDP44762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_02490;product=6-bladed beta-propeller;protein_id=PDP44762.1;transl_table=11 NSLJ01000004.1 Genbank gene 110052 110687 . + . ID=gene-CLI86_02495;Name=CLI86_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02495 NSLJ01000004.1 Protein Homology CDS 110052 110687 . + 0 ID=cds-PDP44763.1;Parent=gene-CLI86_02495;Dbxref=NCBI_GP:PDP44763.1;Name=PDP44763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16109.3;locus_tag=CLI86_02495;product=DUF4827 domain-containing protein;protein_id=PDP44763.1;transl_table=11 NSLJ01000004.1 Genbank gene 110692 111735 . - . ID=gene-CLI86_02500;Name=CLI86_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02500 NSLJ01000004.1 Protein Homology CDS 110692 111735 . - 0 ID=cds-PDP44764.1;Parent=gene-CLI86_02500;Dbxref=NCBI_GP:PDP44764.1;Name=PDP44764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226199.1;locus_tag=CLI86_02500;product=DHH family phosphoesterase;protein_id=PDP44764.1;transl_table=11 NSLJ01000004.1 Genbank gene 111778 112311 . - . ID=gene-CLI86_02505;Name=CLI86_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02505 NSLJ01000004.1 Protein Homology CDS 111778 112311 . - 0 ID=cds-PDP44765.1;Parent=gene-CLI86_02505;Dbxref=NCBI_GP:PDP44765.1;Name=PDP44765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226198.1;locus_tag=CLI86_02505;product=chromate transporter;protein_id=PDP44765.1;transl_table=11 NSLJ01000004.1 Genbank gene 112308 112862 . - . ID=gene-CLI86_02510;Name=CLI86_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02510 NSLJ01000004.1 Protein Homology CDS 112308 112862 . - 0 ID=cds-PDP44766.1;Parent=gene-CLI86_02510;Dbxref=NCBI_GP:PDP44766.1;Name=PDP44766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226197.1;locus_tag=CLI86_02510;product=chromate transporter;protein_id=PDP44766.1;transl_table=11 NSLJ01000004.1 Genbank gene 112986 115577 . + . ID=gene-CLI86_02515;Name=CLI86_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02515 NSLJ01000004.1 Protein Homology CDS 112986 115577 . + 0 ID=cds-PDP44767.1;Parent=gene-CLI86_02515;Dbxref=NCBI_GP:PDP44767.1;Name=PDP44767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010802871.1;locus_tag=CLI86_02515;product=hypothetical protein;protein_id=PDP44767.1;transl_table=11 NSLJ01000004.1 Genbank gene 115697 116110 . - . ID=gene-CLI86_02520;Name=CLI86_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02520 NSLJ01000004.1 Protein Homology CDS 115697 116110 . - 0 ID=cds-PDP44787.1;Parent=gene-CLI86_02520;Dbxref=NCBI_GP:PDP44787.1;Name=PDP44787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641185.1;locus_tag=CLI86_02520;product=heat-shock protein Hsp15;protein_id=PDP44787.1;transl_table=11 NSLJ01000004.1 Genbank gene 116113 116676 . - . ID=gene-CLI86_02525;Name=CLI86_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02525 NSLJ01000004.1 Protein Homology CDS 116113 116676 . - 0 ID=cds-PDP44768.1;Parent=gene-CLI86_02525;Dbxref=NCBI_GP:PDP44768.1;Name=PDP44768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861960.1;locus_tag=CLI86_02525;product=aminoacyl-tRNA hydrolase;protein_id=PDP44768.1;transl_table=11 NSLJ01000004.1 Genbank gene 116770 117432 . - . ID=gene-CLI86_02530;Name=CLI86_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02530 NSLJ01000004.1 Protein Homology CDS 116770 117432 . - 0 ID=cds-PDP44769.1;Parent=gene-CLI86_02530;Dbxref=NCBI_GP:PDP44769.1;Name=PDP44769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226193.1;locus_tag=CLI86_02530;product=50S ribosomal protein L25;protein_id=PDP44769.1;transl_table=11 NSLJ01000004.1 Genbank gene 117739 118818 . + . ID=gene-CLI86_02535;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CLI86_02535 NSLJ01000004.1 Protein Homology CDS 117739 118818 . + 0 ID=cds-PDP44770.1;Parent=gene-CLI86_02535;Dbxref=NCBI_GP:PDP44770.1;Name=PDP44770.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226190.1;locus_tag=CLI86_02535;product=GDP-mannose 4%2C6-dehydratase;protein_id=PDP44770.1;transl_table=11 NSLJ01000004.1 Genbank gene 118849 119226 . + . ID=gene-CLI86_02540;Name=CLI86_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02540 NSLJ01000004.1 Protein Homology CDS 118849 119226 . + 0 ID=cds-PDP44771.1;Parent=gene-CLI86_02540;Dbxref=NCBI_GP:PDP44771.1;Name=PDP44771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006988684.1;locus_tag=CLI86_02540;product=GxxExxY protein;protein_id=PDP44771.1;transl_table=11 NSLJ01000004.1 Genbank gene 119291 120358 . + . ID=gene-CLI86_02545;Name=CLI86_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02545 NSLJ01000004.1 Protein Homology CDS 119291 120358 . + 0 ID=cds-PDP44772.1;Parent=gene-CLI86_02545;Dbxref=NCBI_GP:PDP44772.1;Name=PDP44772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226188.1;locus_tag=CLI86_02545;product=GDP-L-fucose synthase;protein_id=PDP44772.1;transl_table=11 NSLJ01000004.1 Genbank gene 120350 120934 . - . ID=gene-CLI86_02550;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=CLI86_02550 NSLJ01000004.1 Protein Homology CDS 120350 120934 . - 0 ID=cds-PDP44788.1;Parent=gene-CLI86_02550;Dbxref=NCBI_GP:PDP44788.1;Name=PDP44788.1;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009235912.1;locus_tag=CLI86_02550;product=septum formation protein Maf;protein_id=PDP44788.1;transl_table=11 NSLJ01000004.1 Genbank gene 121236 123326 . + . ID=gene-CLI86_02555;Name=CLI86_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02555 NSLJ01000004.1 Protein Homology CDS 121236 123326 . + 0 ID=cds-PDP44773.1;Parent=gene-CLI86_02555;Dbxref=NCBI_GP:PDP44773.1;Name=PDP44773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226186.1;locus_tag=CLI86_02555;product=S9 family peptidase;protein_id=PDP44773.1;transl_table=11 NSLJ01000004.1 Genbank gene 123368 124213 . + . ID=gene-CLI86_02560;Name=CLI86_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02560 NSLJ01000004.1 Protein Homology CDS 123368 124213 . + 0 ID=cds-PDP44774.1;Parent=gene-CLI86_02560;Dbxref=NCBI_GP:PDP44774.1;Name=PDP44774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14257.4;locus_tag=CLI86_02560;product=DUF4349 domain-containing protein;protein_id=PDP44774.1;transl_table=11 NSLJ01000004.1 Genbank gene 124247 126427 . + . ID=gene-CLI86_02565;Name=CLI86_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02565 NSLJ01000004.1 Protein Homology CDS 124247 126427 . + 0 ID=cds-PDP44775.1;Parent=gene-CLI86_02565;Dbxref=NCBI_GP:PDP44775.1;Name=PDP44775.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226184.1;locus_tag=CLI86_02565;product=oligopeptidase B;protein_id=PDP44775.1;transl_table=11 NSLJ01000004.1 Genbank gene 126633 129101 . + . ID=gene-CLI86_02570;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CLI86_02570 NSLJ01000004.1 Protein Homology CDS 126633 129101 . + 0 ID=cds-PDP44776.1;Parent=gene-CLI86_02570;Dbxref=NCBI_GP:PDP44776.1;Name=PDP44776.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005640969.1;locus_tag=CLI86_02570;product=endopeptidase La;protein_id=PDP44776.1;transl_table=11 NSLJ01000004.1 Genbank pseudogene 129162 130900 . - . ID=gene-CLI86_02575;Name=CLI86_02575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02575;pseudo=true NSLJ01000004.1 Protein Homology CDS 129162 130900 . - 0 ID=cds-CLI86_02575;Parent=gene-CLI86_02575;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864366.1;locus_tag=CLI86_02575;product=DNA polymerase III subunit gamma/tau;pseudo=true;transl_table=11 NSLJ01000004.1 Genbank gene 131043 131345 . + . ID=gene-CLI86_02580;Name=CLI86_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02580 NSLJ01000004.1 Protein Homology CDS 131043 131345 . + 0 ID=cds-PDP44777.1;Parent=gene-CLI86_02580;Dbxref=NCBI_GP:PDP44777.1;Name=PDP44777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854418.1;locus_tag=CLI86_02580;product=septum formation initiator;protein_id=PDP44777.1;transl_table=11 NSLJ01000004.1 Genbank gene 131345 131671 . + . ID=gene-CLI86_02585;Name=CLI86_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02585 NSLJ01000004.1 Protein Homology CDS 131345 131671 . + 0 ID=cds-PDP44778.1;Parent=gene-CLI86_02585;Dbxref=NCBI_GP:PDP44778.1;Name=PDP44778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226180.1;locus_tag=CLI86_02585;product=hypothetical protein;protein_id=PDP44778.1;transl_table=11 NSLJ01000004.1 Genbank gene 131852 132550 . + . ID=gene-CLI86_02590;Name=CLI86_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02590 NSLJ01000004.1 Protein Homology CDS 131852 132550 . + 0 ID=cds-PDP44789.1;Parent=gene-CLI86_02590;Dbxref=NCBI_GP:PDP44789.1;Name=PDP44789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_02590;product=hypothetical protein;protein_id=PDP44789.1;transl_table=11 NSLJ01000004.1 Genbank gene 132564 133352 . + . ID=gene-CLI86_02595;Name=CLI86_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02595 NSLJ01000004.1 Protein Homology CDS 132564 133352 . + 0 ID=cds-PDP44779.1;Parent=gene-CLI86_02595;Dbxref=NCBI_GP:PDP44779.1;Name=PDP44779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226178.1;locus_tag=CLI86_02595;product=hypothetical protein;protein_id=PDP44779.1;transl_table=11 NSLJ01000004.1 Genbank pseudogene 133541 133743 . + . ID=gene-CLI86_02600;Name=CLI86_02600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02600;pseudo=true NSLJ01000004.1 Protein Homology CDS 133541 133743 . + 0 ID=cds-CLI86_02600;Parent=gene-CLI86_02600;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_02600;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLJ01000050.1 1 16745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000050.1 Genbank region 1 16745 . + . ID=NSLJ01000050.1:1..16745;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000050.1 Genbank gene 153 1214 . + . ID=gene-CLI86_12845;Name=CLI86_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12845 NSLJ01000050.1 Protein Homology CDS 153 1214 . + 0 ID=cds-PDP42337.1;Parent=gene-CLI86_12845;Dbxref=NCBI_GP:PDP42337.1;Name=PDP42337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009752276.1;locus_tag=CLI86_12845;product=mobilization protein;protein_id=PDP42337.1;transl_table=11 NSLJ01000050.1 Genbank pseudogene 1232 1432 . + . ID=gene-CLI86_12850;Name=CLI86_12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12850;pseudo=true NSLJ01000050.1 Protein Homology CDS 1232 1432 . + 0 ID=cds-CLI86_12850;Parent=gene-CLI86_12850;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007574496.1;locus_tag=CLI86_12850;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000050.1 Genbank gene 1686 2558 . + . ID=gene-CLI86_12855;Name=CLI86_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12855 NSLJ01000050.1 Protein Homology CDS 1686 2558 . + 0 ID=cds-PDP42338.1;Parent=gene-CLI86_12855;Dbxref=NCBI_GP:PDP42338.1;Name=PDP42338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965912.1;locus_tag=CLI86_12855;product=YicC family protein;protein_id=PDP42338.1;transl_table=11 NSLJ01000050.1 Genbank gene 2558 3124 . + . ID=gene-CLI86_12860;Name=CLI86_12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12860 NSLJ01000050.1 Protein Homology CDS 2558 3124 . + 0 ID=cds-PDP42339.1;Parent=gene-CLI86_12860;Dbxref=NCBI_GP:PDP42339.1;Name=PDP42339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224059.1;locus_tag=CLI86_12860;product=guanylate kinase;protein_id=PDP42339.1;transl_table=11 NSLJ01000050.1 Genbank gene 3164 3769 . + . ID=gene-CLI86_12865;Name=CLI86_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12865 NSLJ01000050.1 Protein Homology CDS 3164 3769 . + 0 ID=cds-PDP42340.1;Parent=gene-CLI86_12865;Dbxref=NCBI_GP:PDP42340.1;Name=PDP42340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224058.1;locus_tag=CLI86_12865;product=nicotinate-nucleotide adenylyltransferase;protein_id=PDP42340.1;transl_table=11 NSLJ01000050.1 Genbank gene 3850 4293 . + . ID=gene-CLI86_12870;Name=CLI86_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12870 NSLJ01000050.1 Protein Homology CDS 3850 4293 . + 0 ID=cds-PDP42341.1;Parent=gene-CLI86_12870;Dbxref=NCBI_GP:PDP42341.1;Name=PDP42341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224057.1;locus_tag=CLI86_12870;product=CMP deaminase;protein_id=PDP42341.1;transl_table=11 NSLJ01000050.1 Genbank gene 4320 5933 . + . ID=gene-CLI86_12875;Name=CLI86_12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12875 NSLJ01000050.1 Protein Homology CDS 4320 5933 . + 0 ID=cds-PDP42353.1;Parent=gene-CLI86_12875;Dbxref=NCBI_GP:PDP42353.1;Name=PDP42353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224056.1;locus_tag=CLI86_12875;product=peptidase S41;protein_id=PDP42353.1;transl_table=11 NSLJ01000050.1 Genbank gene 5930 6487 . + . ID=gene-CLI86_12880;Name=CLI86_12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12880 NSLJ01000050.1 Protein Homology CDS 5930 6487 . + 0 ID=cds-PDP42342.1;Parent=gene-CLI86_12880;Dbxref=NCBI_GP:PDP42342.1;Name=PDP42342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224055.1;locus_tag=CLI86_12880;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=PDP42342.1;transl_table=11 NSLJ01000050.1 Genbank gene 6496 6789 . - . ID=gene-CLI86_12885;Name=CLI86_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12885 NSLJ01000050.1 Protein Homology CDS 6496 6789 . - 0 ID=cds-PDP42343.1;Parent=gene-CLI86_12885;Dbxref=NCBI_GP:PDP42343.1;Name=PDP42343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646543.1;locus_tag=CLI86_12885;product=DUF721 domain-containing protein;protein_id=PDP42343.1;transl_table=11 NSLJ01000050.1 Genbank gene 6786 7889 . - . ID=gene-CLI86_12890;Name=CLI86_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12890 NSLJ01000050.1 Protein Homology CDS 6786 7889 . - 0 ID=cds-PDP42344.1;Parent=gene-CLI86_12890;Dbxref=NCBI_GP:PDP42344.1;Name=PDP42344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224053.1;locus_tag=CLI86_12890;product=DNA replication and repair protein RecF;protein_id=PDP42344.1;transl_table=11 NSLJ01000050.1 Genbank gene 8039 8731 . + . ID=gene-CLI86_12895;Name=CLI86_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12895 NSLJ01000050.1 Protein Homology CDS 8039 8731 . + 0 ID=cds-PDP42345.1;Parent=gene-CLI86_12895;Dbxref=NCBI_GP:PDP42345.1;Name=PDP42345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224052.1;locus_tag=CLI86_12895;product=hypothetical protein;protein_id=PDP42345.1;transl_table=11 NSLJ01000050.1 Genbank gene 8734 9237 . + . ID=gene-CLI86_12900;Name=CLI86_12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12900 NSLJ01000050.1 Protein Homology CDS 8734 9237 . + 0 ID=cds-PDP42346.1;Parent=gene-CLI86_12900;Dbxref=NCBI_GP:PDP42346.1;Name=PDP42346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224051.1;locus_tag=CLI86_12900;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=PDP42346.1;transl_table=11 NSLJ01000050.1 Genbank gene 9268 9350 . + . ID=gene-CLI86_12905;Name=CLI86_12905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_12905 NSLJ01000050.1 tRNAscan-SE tRNA 9268 9350 . + . ID=rna-CLI86_12905;Parent=gene-CLI86_12905;anticodon=(pos:9302..9304);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12905;product=tRNA-Tyr NSLJ01000050.1 tRNAscan-SE exon 9268 9350 . + . ID=exon-CLI86_12905-1;Parent=rna-CLI86_12905;anticodon=(pos:9302..9304);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12905;product=tRNA-Tyr NSLJ01000050.1 Genbank gene 9416 9491 . + . ID=gene-CLI86_12910;Name=CLI86_12910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_12910 NSLJ01000050.1 tRNAscan-SE tRNA 9416 9491 . + . ID=rna-CLI86_12910;Parent=gene-CLI86_12910;anticodon=(pos:9449..9451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12910;product=tRNA-Gly NSLJ01000050.1 tRNAscan-SE exon 9416 9491 . + . ID=exon-CLI86_12910-1;Parent=rna-CLI86_12910;anticodon=(pos:9449..9451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12910;product=tRNA-Gly NSLJ01000050.1 Genbank pseudogene 9584 9694 . + . ID=gene-CLI86_12915;Name=CLI86_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12915;pseudo=true NSLJ01000050.1 Protein Homology CDS 9584 9694 . + 0 ID=cds-CLI86_12915;Parent=gene-CLI86_12915;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435585.1;locus_tag=CLI86_12915;product=transcriptional regulator;pseudo=true;transl_table=11 NSLJ01000050.1 Genbank gene 9777 10040 . + . ID=gene-CLI86_12920;Name=CLI86_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12920 NSLJ01000050.1 Protein Homology CDS 9777 10040 . + 0 ID=cds-PDP42347.1;Parent=gene-CLI86_12920;Dbxref=NCBI_GP:PDP42347.1;Name=PDP42347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224049.1;locus_tag=CLI86_12920;product=methyltransferase;protein_id=PDP42347.1;transl_table=11 NSLJ01000050.1 Genbank gene 10403 10699 . + . ID=gene-CLI86_12925;Name=CLI86_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12925 NSLJ01000050.1 Protein Homology CDS 10403 10699 . + 0 ID=cds-PDP42348.1;Parent=gene-CLI86_12925;Dbxref=NCBI_GP:PDP42348.1;Name=PDP42348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009274828.1;locus_tag=CLI86_12925;product=XRE family transcriptional regulator;protein_id=PDP42348.1;transl_table=11 NSLJ01000050.1 Genbank gene 10696 12039 . + . ID=gene-CLI86_12930;Name=CLI86_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12930 NSLJ01000050.1 Protein Homology CDS 10696 12039 . + 0 ID=cds-PDP42349.1;Parent=gene-CLI86_12930;Dbxref=NCBI_GP:PDP42349.1;Name=PDP42349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008777464.1;locus_tag=CLI86_12930;product=phosphatidylinositol kinase;protein_id=PDP42349.1;transl_table=11 NSLJ01000050.1 Genbank pseudogene 12049 12306 . - . ID=gene-CLI86_12935;Name=CLI86_12935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_12935;pseudo=true NSLJ01000050.1 Protein Homology CDS 12049 12306 . - 0 ID=cds-CLI86_12935;Parent=gene-CLI86_12935;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956029.1;locus_tag=CLI86_12935;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLJ01000050.1 Genbank gene 12468 13547 . - . ID=gene-CLI86_12940;Name=CLI86_12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12940 NSLJ01000050.1 Protein Homology CDS 12468 13547 . - 0 ID=cds-PDP42350.1;Parent=gene-CLI86_12940;Dbxref=NCBI_GP:PDP42350.1;Name=PDP42350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224047.1;locus_tag=CLI86_12940;product=hypothetical protein;protein_id=PDP42350.1;transl_table=11 NSLJ01000050.1 Genbank gene 13591 14607 . - . ID=gene-CLI86_12945;Name=CLI86_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12945 NSLJ01000050.1 Protein Homology CDS 13591 14607 . - 0 ID=cds-PDP42351.1;Parent=gene-CLI86_12945;Dbxref=NCBI_GP:PDP42351.1;Name=PDP42351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005779164.1;locus_tag=CLI86_12945;product=peptide chain release factor 2;protein_id=PDP42351.1;transl_table=11 NSLJ01000050.1 Genbank gene 14802 16514 . - . ID=gene-CLI86_12950;Name=CLI86_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12950 NSLJ01000050.1 Protein Homology CDS 14802 16514 . - 0 ID=cds-PDP42352.1;Parent=gene-CLI86_12950;Dbxref=NCBI_GP:PDP42352.1;Name=PDP42352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224045.1;locus_tag=CLI86_12950;product=sodium-independent anion transporter;protein_id=PDP42352.1;transl_table=11 ##sequence-region NSLJ01000051.1 1 12753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000051.1 Genbank region 1 12753 . + . ID=NSLJ01000051.1:1..12753;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000051.1 Genbank gene 817 1581 . - . ID=gene-CLI86_12955;Name=CLI86_12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12955 NSLJ01000051.1 Protein Homology CDS 817 1581 . - 0 ID=cds-PDP42215.1;Parent=gene-CLI86_12955;Dbxref=NCBI_GP:PDP42215.1;Name=PDP42215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224262.1;locus_tag=CLI86_12955;product=RNA methyltransferase;protein_id=PDP42215.1;transl_table=11 NSLJ01000051.1 Genbank gene 1657 4008 . + . ID=gene-CLI86_12960;Name=CLI86_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12960 NSLJ01000051.1 Protein Homology CDS 1657 4008 . + 0 ID=cds-PDP42216.1;Parent=gene-CLI86_12960;Dbxref=NCBI_GP:PDP42216.1;Name=PDP42216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007657531.1;locus_tag=CLI86_12960;product=hypothetical protein;protein_id=PDP42216.1;transl_table=11 NSLJ01000051.1 Genbank gene 4103 4954 . + . ID=gene-CLI86_12965;Name=CLI86_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12965 NSLJ01000051.1 GeneMarkS+ CDS 4103 4954 . + 0 ID=cds-PDP42217.1;Parent=gene-CLI86_12965;Dbxref=NCBI_GP:PDP42217.1;Name=PDP42217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_12965;product=hypothetical protein;protein_id=PDP42217.1;transl_table=11 NSLJ01000051.1 Genbank gene 5041 5114 . + . ID=gene-CLI86_12970;Name=CLI86_12970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_12970 NSLJ01000051.1 tRNAscan-SE tRNA 5041 5114 . + . ID=rna-CLI86_12970;Parent=gene-CLI86_12970;anticodon=(pos:5075..5077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12970;product=tRNA-Arg NSLJ01000051.1 tRNAscan-SE exon 5041 5114 . + . ID=exon-CLI86_12970-1;Parent=rna-CLI86_12970;anticodon=(pos:5075..5077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_12970;product=tRNA-Arg NSLJ01000051.1 Genbank gene 5251 6324 . - . ID=gene-CLI86_12975;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CLI86_12975 NSLJ01000051.1 Protein Homology CDS 5251 6324 . - 0 ID=cds-PDP42218.1;Parent=gene-CLI86_12975;Dbxref=NCBI_GP:PDP42218.1;Name=PDP42218.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224259.1;locus_tag=CLI86_12975;product=3-isopropylmalate dehydrogenase;protein_id=PDP42218.1;transl_table=11 NSLJ01000051.1 Genbank gene 6385 7917 . - . ID=gene-CLI86_12980;Name=CLI86_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12980 NSLJ01000051.1 Protein Homology CDS 6385 7917 . - 0 ID=cds-PDP42224.1;Parent=gene-CLI86_12980;Dbxref=NCBI_GP:PDP42224.1;Name=PDP42224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006797654.1;locus_tag=CLI86_12980;product=2-isopropylmalate synthase;protein_id=PDP42224.1;transl_table=11 NSLJ01000051.1 Genbank gene 8060 8653 . - . ID=gene-CLI86_12985;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CLI86_12985 NSLJ01000051.1 Protein Homology CDS 8060 8653 . - 0 ID=cds-PDP42219.1;Parent=gene-CLI86_12985;Dbxref=NCBI_GP:PDP42219.1;Name=PDP42219.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224257.1;locus_tag=CLI86_12985;product=3-isopropylmalate dehydratase small subunit;protein_id=PDP42219.1;transl_table=11 NSLJ01000051.1 Genbank gene 8659 9120 . - . ID=gene-CLI86_12990;Name=CLI86_12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_12990 NSLJ01000051.1 Protein Homology CDS 8659 9120 . - 0 ID=cds-PDP42220.1;Parent=gene-CLI86_12990;Dbxref=NCBI_GP:PDP42220.1;Name=PDP42220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224256.1;locus_tag=CLI86_12990;product=GxxExxY protein;protein_id=PDP42220.1;transl_table=11 NSLJ01000051.1 Genbank gene 9161 10597 . - . ID=gene-CLI86_12995;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CLI86_12995 NSLJ01000051.1 Protein Homology CDS 9161 10597 . - 0 ID=cds-PDP42221.1;Parent=gene-CLI86_12995;Dbxref=NCBI_GP:PDP42221.1;Name=PDP42221.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224255.1;locus_tag=CLI86_12995;product=3-isopropylmalate dehydratase large subunit;protein_id=PDP42221.1;transl_table=11 NSLJ01000051.1 Genbank gene 10657 12144 . - . ID=gene-CLI86_13000;Name=CLI86_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13000 NSLJ01000051.1 Protein Homology CDS 10657 12144 . - 0 ID=cds-PDP42222.1;Parent=gene-CLI86_13000;Dbxref=NCBI_GP:PDP42222.1;Name=PDP42222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842998.1;locus_tag=CLI86_13000;product=2-isopropylmalate synthase;protein_id=PDP42222.1;transl_table=11 NSLJ01000051.1 Genbank gene 12211 12696 . - . ID=gene-CLI86_13005;Name=CLI86_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13005 NSLJ01000051.1 GeneMarkS+ CDS 12211 12696 . - 0 ID=cds-PDP42223.1;Parent=gene-CLI86_13005;Dbxref=NCBI_GP:PDP42223.1;Name=PDP42223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13005;product=hypothetical protein;protein_id=PDP42223.1;transl_table=11 ##sequence-region NSLJ01000052.1 1 11336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000052.1 Genbank region 1 11336 . + . ID=NSLJ01000052.1:1..11336;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000052.1 Genbank gene 436 1635 . + . ID=gene-CLI86_13010;Name=CLI86_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13010 NSLJ01000052.1 Protein Homology CDS 436 1635 . + 0 ID=cds-PDP42204.1;Parent=gene-CLI86_13010;Dbxref=NCBI_GP:PDP42204.1;Name=PDP42204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224544.1;locus_tag=CLI86_13010;product=3-oxoacyl-ACP synthase;protein_id=PDP42204.1;transl_table=11 NSLJ01000052.1 Genbank gene 1642 2670 . + . ID=gene-CLI86_13015;Name=CLI86_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13015 NSLJ01000052.1 Protein Homology CDS 1642 2670 . + 0 ID=cds-PDP42205.1;Parent=gene-CLI86_13015;Dbxref=NCBI_GP:PDP42205.1;Name=PDP42205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13723.4;locus_tag=CLI86_13015;product=hypothetical protein;protein_id=PDP42205.1;transl_table=11 NSLJ01000052.1 Genbank gene 2700 3017 . + . ID=gene-CLI86_13020;Name=CLI86_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13020 NSLJ01000052.1 Protein Homology CDS 2700 3017 . + 0 ID=cds-PDP42214.1;Parent=gene-CLI86_13020;Dbxref=NCBI_GP:PDP42214.1;Name=PDP42214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224546.1;locus_tag=CLI86_13020;product=hypothetical protein;protein_id=PDP42214.1;transl_table=11 NSLJ01000052.1 Genbank gene 3045 3779 . + . ID=gene-CLI86_13025;Name=CLI86_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13025 NSLJ01000052.1 Protein Homology CDS 3045 3779 . + 0 ID=cds-PDP42206.1;Parent=gene-CLI86_13025;Dbxref=NCBI_GP:PDP42206.1;Name=PDP42206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097996.1;locus_tag=CLI86_13025;product=RDD family protein;protein_id=PDP42206.1;transl_table=11 NSLJ01000052.1 Genbank gene 3866 4870 . + . ID=gene-CLI86_13030;Name=CLI86_13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13030 NSLJ01000052.1 Protein Homology CDS 3866 4870 . + 0 ID=cds-PDP42207.1;Parent=gene-CLI86_13030;Dbxref=NCBI_GP:PDP42207.1;Name=PDP42207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013546433.1;locus_tag=CLI86_13030;product=tRNA dihydrouridine synthase DusB;protein_id=PDP42207.1;transl_table=11 NSLJ01000052.1 Genbank gene 4864 6285 . - . ID=gene-CLI86_13035;Name=CLI86_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13035 NSLJ01000052.1 Protein Homology CDS 4864 6285 . - 0 ID=cds-PDP42208.1;Parent=gene-CLI86_13035;Dbxref=NCBI_GP:PDP42208.1;Name=PDP42208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00932.17;locus_tag=CLI86_13035;product=hypothetical protein;protein_id=PDP42208.1;transl_table=11 NSLJ01000052.1 Genbank gene 6453 7463 . + . ID=gene-CLI86_13040;Name=CLI86_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13040 NSLJ01000052.1 Protein Homology CDS 6453 7463 . + 0 ID=cds-PDP42209.1;Parent=gene-CLI86_13040;Dbxref=NCBI_GP:PDP42209.1;Name=PDP42209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005633219.1;locus_tag=CLI86_13040;product=aspartate-semialdehyde dehydrogenase;protein_id=PDP42209.1;transl_table=11 NSLJ01000052.1 Genbank gene 7492 7725 . - . ID=gene-CLI86_13045;Name=CLI86_13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13045 NSLJ01000052.1 Protein Homology CDS 7492 7725 . - 0 ID=cds-PDP42210.1;Parent=gene-CLI86_13045;Dbxref=NCBI_GP:PDP42210.1;Name=PDP42210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00581.18;locus_tag=CLI86_13045;product=rhodanese-like domain-containing protein;protein_id=PDP42210.1;transl_table=11 NSLJ01000052.1 Genbank gene 7990 10311 . + . ID=gene-CLI86_13050;Name=CLI86_13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13050 NSLJ01000052.1 Protein Homology CDS 7990 10311 . + 0 ID=cds-PDP42211.1;Parent=gene-CLI86_13050;Dbxref=NCBI_GP:PDP42211.1;Name=PDP42211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_13050;product=hypothetical protein;protein_id=PDP42211.1;transl_table=11 NSLJ01000052.1 Genbank gene 10308 10889 . + . ID=gene-CLI86_13055;Name=CLI86_13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13055 NSLJ01000052.1 Protein Homology CDS 10308 10889 . + 0 ID=cds-PDP42212.1;Parent=gene-CLI86_13055;Dbxref=NCBI_GP:PDP42212.1;Name=PDP42212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00535.24;locus_tag=CLI86_13055;product=hypothetical protein;protein_id=PDP42212.1;transl_table=11 NSLJ01000052.1 Genbank gene 10870 11238 . + . ID=gene-CLI86_13060;Name=CLI86_13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13060 NSLJ01000052.1 GeneMarkS+ CDS 10870 11238 . + 0 ID=cds-PDP42213.1;Parent=gene-CLI86_13060;Dbxref=NCBI_GP:PDP42213.1;Name=PDP42213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13060;product=hypothetical protein;protein_id=PDP42213.1;transl_table=11 ##sequence-region NSLJ01000053.1 1 10676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000053.1 Genbank region 1 10676 . + . ID=NSLJ01000053.1:1..10676;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000053.1 Genbank gene 10 939 . - . ID=gene-CLI86_13065;Name=CLI86_13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13065 NSLJ01000053.1 Protein Homology CDS 10 939 . - 0 ID=cds-PDP42081.1;Parent=gene-CLI86_13065;Dbxref=NCBI_GP:PDP42081.1;Name=PDP42081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04397.13;locus_tag=CLI86_13065;product=hypothetical protein;protein_id=PDP42081.1;transl_table=11 NSLJ01000053.1 Genbank gene 977 2221 . - . ID=gene-CLI86_13070;Name=CLI86_13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13070 NSLJ01000053.1 Protein Homology CDS 977 2221 . - 0 ID=cds-PDP42082.1;Parent=gene-CLI86_13070;Dbxref=NCBI_GP:PDP42082.1;Name=PDP42082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04157;locus_tag=CLI86_13070;product=glycosyl transferase;protein_id=PDP42082.1;transl_table=11 NSLJ01000053.1 Genbank gene 2185 2718 . - . ID=gene-CLI86_13075;Name=CLI86_13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13075 NSLJ01000053.1 GeneMarkS+ CDS 2185 2718 . - 0 ID=cds-PDP42083.1;Parent=gene-CLI86_13075;Dbxref=NCBI_GP:PDP42083.1;Name=PDP42083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13075;product=hypothetical protein;protein_id=PDP42083.1;transl_table=11 NSLJ01000053.1 Genbank gene 3024 3995 . - . ID=gene-CLI86_13080;Name=CLI86_13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13080 NSLJ01000053.1 Protein Homology CDS 3024 3995 . - 0 ID=cds-PDP42084.1;Parent=gene-CLI86_13080;Dbxref=NCBI_GP:PDP42084.1;Name=PDP42084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223584.1;locus_tag=CLI86_13080;product=TraB/GumN family protein;protein_id=PDP42084.1;transl_table=11 NSLJ01000053.1 Genbank gene 4180 5142 . - . ID=gene-CLI86_13085;Name=CLI86_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13085 NSLJ01000053.1 Protein Homology CDS 4180 5142 . - 0 ID=cds-PDP42088.1;Parent=gene-CLI86_13085;Dbxref=NCBI_GP:PDP42088.1;Name=PDP42088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223568.1;locus_tag=CLI86_13085;product=TraB/GumN family protein;protein_id=PDP42088.1;transl_table=11 NSLJ01000053.1 Genbank gene 5409 6665 . - . ID=gene-CLI86_13090;Name=CLI86_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13090 NSLJ01000053.1 Protein Homology CDS 5409 6665 . - 0 ID=cds-PDP42085.1;Parent=gene-CLI86_13090;Dbxref=NCBI_GP:PDP42085.1;Name=PDP42085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223567.1;locus_tag=CLI86_13090;product=peptidase C39;protein_id=PDP42085.1;transl_table=11 NSLJ01000053.1 Genbank gene 7208 8791 . - . ID=gene-CLI86_13095;Name=CLI86_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13095 NSLJ01000053.1 Protein Homology CDS 7208 8791 . - 0 ID=cds-PDP42086.1;Parent=gene-CLI86_13095;Dbxref=NCBI_GP:PDP42086.1;Name=PDP42086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03572.16;locus_tag=CLI86_13095;product=hypothetical protein;protein_id=PDP42086.1;transl_table=11 NSLJ01000053.1 Genbank gene 8856 10151 . - . ID=gene-CLI86_13100;Name=CLI86_13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13100 NSLJ01000053.1 Protein Homology CDS 8856 10151 . - 0 ID=cds-PDP42087.1;Parent=gene-CLI86_13100;Dbxref=NCBI_GP:PDP42087.1;Name=PDP42087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085;locus_tag=CLI86_13100;product=hypothetical protein;protein_id=PDP42087.1;transl_table=11 ##sequence-region NSLJ01000054.1 1 9258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000054.1 Genbank region 1 9258 . + . ID=NSLJ01000054.1:1..9258;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000054.1 Genbank pseudogene 130 321 . + . ID=gene-CLI86_13105;Name=CLI86_13105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13105;pseudo=true NSLJ01000054.1 Protein Homology CDS 130 321 . + 0 ID=cds-CLI86_13105;Parent=gene-CLI86_13105;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_13105;product=IS1 family transposase;pseudo=true;transl_table=11 NSLJ01000054.1 Genbank gene 380 817 . + . ID=gene-CLI86_13110;Name=CLI86_13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13110 NSLJ01000054.1 Protein Homology CDS 380 817 . + 0 ID=cds-PDP42077.1;Parent=gene-CLI86_13110;Dbxref=NCBI_GP:PDP42077.1;Name=PDP42077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965522.1;locus_tag=CLI86_13110;product=GNAT family N-acetyltransferase;protein_id=PDP42077.1;transl_table=11 NSLJ01000054.1 Genbank gene 1141 1347 . + . ID=gene-CLI86_13115;Name=CLI86_13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13115 NSLJ01000054.1 Protein Homology CDS 1141 1347 . + 0 ID=cds-PDP42071.1;Parent=gene-CLI86_13115;Dbxref=NCBI_GP:PDP42071.1;Name=PDP42071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005851902.1;locus_tag=CLI86_13115;product=XRE family transcriptional regulator;protein_id=PDP42071.1;transl_table=11 NSLJ01000054.1 Genbank pseudogene 1344 1931 . + . ID=gene-CLI86_13120;Name=CLI86_13120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13120;pseudo=true NSLJ01000054.1 Protein Homology CDS 1344 1931 . + 0 ID=cds-CLI86_13120;Parent=gene-CLI86_13120;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368391.1;locus_tag=CLI86_13120;product=cell filamentation protein Fic;pseudo=true;transl_table=11 NSLJ01000054.1 Genbank gene 1979 4306 . + . ID=gene-CLI86_13125;Name=CLI86_13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13125 NSLJ01000054.1 Protein Homology CDS 1979 4306 . + 0 ID=cds-PDP42072.1;Parent=gene-CLI86_13125;Dbxref=NCBI_GP:PDP42072.1;Name=PDP42072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224138.1;locus_tag=CLI86_13125;product=beta-glucosidase;protein_id=PDP42072.1;transl_table=11 NSLJ01000054.1 Genbank gene 4321 5358 . + . ID=gene-CLI86_13130;Name=CLI86_13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13130 NSLJ01000054.1 Protein Homology CDS 4321 5358 . + 0 ID=cds-PDP42073.1;Parent=gene-CLI86_13130;Dbxref=NCBI_GP:PDP42073.1;Name=PDP42073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008245216.1;locus_tag=CLI86_13130;product=sialidase;protein_id=PDP42073.1;transl_table=11 NSLJ01000054.1 Genbank pseudogene 5336 5544 . - . ID=gene-CLI86_13135;Name=CLI86_13135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13135;pseudo=true NSLJ01000054.1 Protein Homology CDS 5336 5544 . - 0 ID=cds-CLI86_13135;Parent=gene-CLI86_13135;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135622.1;locus_tag=CLI86_13135;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000054.1 Genbank gene 6036 6506 . + . ID=gene-CLI86_13140;Name=CLI86_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13140 NSLJ01000054.1 GeneMarkS+ CDS 6036 6506 . + 0 ID=cds-PDP42074.1;Parent=gene-CLI86_13140;Dbxref=NCBI_GP:PDP42074.1;Name=PDP42074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13140;product=hypothetical protein;protein_id=PDP42074.1;transl_table=11 NSLJ01000054.1 Genbank gene 6535 7002 . + . ID=gene-CLI86_13145;Name=CLI86_13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13145 NSLJ01000054.1 Protein Homology CDS 6535 7002 . + 0 ID=cds-PDP42075.1;Parent=gene-CLI86_13145;Dbxref=NCBI_GP:PDP42075.1;Name=PDP42075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07504.11;locus_tag=CLI86_13145;product=hypothetical protein;protein_id=PDP42075.1;transl_table=11 NSLJ01000054.1 Genbank gene 7045 9036 . + . ID=gene-CLI86_13150;Name=CLI86_13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13150 NSLJ01000054.1 Protein Homology CDS 7045 9036 . + 0 ID=cds-PDP42076.1;Parent=gene-CLI86_13150;Dbxref=NCBI_GP:PDP42076.1;Name=PDP42076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01447.16%2CHMM:TIGR04183;locus_tag=CLI86_13150;product=hypothetical protein;protein_id=PDP42076.1;transl_table=11 NSLJ01000054.1 Genbank gene 9150 9258 . + . ID=gene-CLI86_13155;Name=CLI86_13155;end_range=9258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13155;partial=true NSLJ01000054.1 Protein Homology CDS 9150 9258 . + 0 ID=cds-PDP42078.1;Parent=gene-CLI86_13155;Dbxref=NCBI_GP:PDP42078.1;Name=PDP42078.1;end_range=9258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224670.1;locus_tag=CLI86_13155;partial=true;product=IS1595 family transposase;protein_id=PDP42078.1;transl_table=11 ##sequence-region NSLJ01000055.1 1 8416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000055.1 Genbank region 1 8416 . + . ID=NSLJ01000055.1:1..8416;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000055.1 Genbank gene 78 611 . + . ID=gene-CLI86_13160;Name=CLI86_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13160 NSLJ01000055.1 Protein Homology CDS 78 611 . + 0 ID=cds-PDP41961.1;Parent=gene-CLI86_13160;Dbxref=NCBI_GP:PDP41961.1;Name=PDP41961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226113.1;locus_tag=CLI86_13160;product=RNA polymerase subunit sigma-70;protein_id=PDP41961.1;transl_table=11 NSLJ01000055.1 Genbank gene 634 879 . + . ID=gene-CLI86_13165;Name=CLI86_13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13165 NSLJ01000055.1 Protein Homology CDS 634 879 . + 0 ID=cds-PDP41962.1;Parent=gene-CLI86_13165;Dbxref=NCBI_GP:PDP41962.1;Name=PDP41962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008254219.1;locus_tag=CLI86_13165;product=DUF1508 domain-containing protein;protein_id=PDP41962.1;transl_table=11 NSLJ01000055.1 Genbank gene 1647 2543 . + . ID=gene-CLI86_13170;Name=CLI86_13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13170 NSLJ01000055.1 Protein Homology CDS 1647 2543 . + 0 ID=cds-PDP41963.1;Parent=gene-CLI86_13170;Dbxref=NCBI_GP:PDP41963.1;Name=PDP41963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06889.9;locus_tag=CLI86_13170;product=DUF1266 domain-containing protein;protein_id=PDP41963.1;transl_table=11 NSLJ01000055.1 Genbank gene 2628 3401 . + . ID=gene-CLI86_13175;Name=CLI86_13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13175 NSLJ01000055.1 Protein Homology CDS 2628 3401 . + 0 ID=cds-PDP41964.1;Parent=gene-CLI86_13175;Dbxref=NCBI_GP:PDP41964.1;Name=PDP41964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008863210.1;locus_tag=CLI86_13175;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=PDP41964.1;transl_table=11 NSLJ01000055.1 Genbank gene 3398 4504 . + . ID=gene-CLI86_13180;Name=CLI86_13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13180 NSLJ01000055.1 Protein Homology CDS 3398 4504 . + 0 ID=cds-PDP41965.1;Parent=gene-CLI86_13180;Dbxref=NCBI_GP:PDP41965.1;Name=PDP41965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226117.1;locus_tag=CLI86_13180;product=MRP family ATP-binding protein;protein_id=PDP41965.1;transl_table=11 NSLJ01000055.1 Genbank pseudogene 4848 4979 . + . ID=gene-CLI86_13185;Name=CLI86_13185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13185;pseudo=true NSLJ01000055.1 Protein Homology CDS 4848 4979 . + 0 ID=cds-CLI86_13185;Parent=gene-CLI86_13185;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368361.1;locus_tag=CLI86_13185;product=HXXEE domain-containing protein;pseudo=true;transl_table=11 NSLJ01000055.1 Genbank gene 5155 5442 . + . ID=gene-CLI86_13190;Name=CLI86_13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13190 NSLJ01000055.1 GeneMarkS+ CDS 5155 5442 . + 0 ID=cds-PDP41966.1;Parent=gene-CLI86_13190;Dbxref=NCBI_GP:PDP41966.1;Name=PDP41966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13190;product=hypothetical protein;protein_id=PDP41966.1;transl_table=11 NSLJ01000055.1 Genbank gene 5532 7235 . - . ID=gene-CLI86_13195;Name=CLI86_13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13195 NSLJ01000055.1 Protein Homology CDS 5532 7235 . - 0 ID=cds-PDP41967.1;Parent=gene-CLI86_13195;Dbxref=NCBI_GP:PDP41967.1;Name=PDP41967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226119.1;locus_tag=CLI86_13195;product=peptidase S41;protein_id=PDP41967.1;transl_table=11 NSLJ01000055.1 Genbank gene 7294 8271 . - . ID=gene-CLI86_13200;Name=CLI86_13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13200 NSLJ01000055.1 Protein Homology CDS 7294 8271 . - 0 ID=cds-PDP41968.1;Parent=gene-CLI86_13200;Dbxref=NCBI_GP:PDP41968.1;Name=PDP41968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009016953.1;locus_tag=CLI86_13200;product=adenosine kinase;protein_id=PDP41968.1;transl_table=11 ##sequence-region NSLJ01000056.1 1 8116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000056.1 Genbank region 1 8116 . + . ID=NSLJ01000056.1:1..8116;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000056.1 Genbank gene 303 653 . + . ID=gene-CLI86_13205;Name=CLI86_13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13205 NSLJ01000056.1 Protein Homology CDS 303 653 . + 0 ID=cds-PDP41957.1;Parent=gene-CLI86_13205;Dbxref=NCBI_GP:PDP41957.1;Name=PDP41957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016087093.1;locus_tag=CLI86_13205;product=hypothetical protein;protein_id=PDP41957.1;transl_table=11 NSLJ01000056.1 Genbank gene 733 1200 . + . ID=gene-CLI86_13210;Name=CLI86_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13210 NSLJ01000056.1 Protein Homology CDS 733 1200 . + 0 ID=cds-PDP41950.1;Parent=gene-CLI86_13210;Dbxref=NCBI_GP:PDP41950.1;Name=PDP41950.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15565.4;locus_tag=CLI86_13210;product=hypothetical protein;protein_id=PDP41950.1;transl_table=11 NSLJ01000056.1 Genbank gene 1299 1976 . + . ID=gene-CLI86_13215;Name=CLI86_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13215 NSLJ01000056.1 GeneMarkS+ CDS 1299 1976 . + 0 ID=cds-PDP41951.1;Parent=gene-CLI86_13215;Dbxref=NCBI_GP:PDP41951.1;Name=PDP41951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13215;product=hypothetical protein;protein_id=PDP41951.1;transl_table=11 NSLJ01000056.1 Genbank gene 1879 2127 . + . ID=gene-CLI86_13220;Name=CLI86_13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13220 NSLJ01000056.1 Protein Homology CDS 1879 2127 . + 0 ID=cds-PDP41952.1;Parent=gene-CLI86_13220;Dbxref=NCBI_GP:PDP41952.1;Name=PDP41952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14414.4;locus_tag=CLI86_13220;product=hypothetical protein;protein_id=PDP41952.1;transl_table=11 NSLJ01000056.1 Genbank gene 2124 2588 . + . ID=gene-CLI86_13225;Name=CLI86_13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13225 NSLJ01000056.1 Protein Homology CDS 2124 2588 . + 0 ID=cds-PDP41953.1;Parent=gene-CLI86_13225;Dbxref=NCBI_GP:PDP41953.1;Name=PDP41953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14568.4;locus_tag=CLI86_13225;product=SMI1/KNR4 family protein;protein_id=PDP41953.1;transl_table=11 NSLJ01000056.1 Genbank gene 2855 5080 . + . ID=gene-CLI86_13230;Name=CLI86_13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13230 NSLJ01000056.1 Protein Homology CDS 2855 5080 . + 0 ID=cds-PDP41954.1;Parent=gene-CLI86_13230;Dbxref=NCBI_GP:PDP41954.1;Name=PDP41954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004334837.1;locus_tag=CLI86_13230;product=hypothetical protein;protein_id=PDP41954.1;transl_table=11 NSLJ01000056.1 Genbank gene 5168 5689 . + . ID=gene-CLI86_13235;Name=CLI86_13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13235 NSLJ01000056.1 GeneMarkS+ CDS 5168 5689 . + 0 ID=cds-PDP41955.1;Parent=gene-CLI86_13235;Dbxref=NCBI_GP:PDP41955.1;Name=PDP41955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13235;product=hypothetical protein;protein_id=PDP41955.1;transl_table=11 NSLJ01000056.1 Genbank gene 5897 6424 . + . ID=gene-CLI86_13240;Name=CLI86_13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13240 NSLJ01000056.1 Protein Homology CDS 5897 6424 . + 0 ID=cds-PDP41958.1;Parent=gene-CLI86_13240;Dbxref=NCBI_GP:PDP41958.1;Name=PDP41958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013617079.1;locus_tag=CLI86_13240;product=hypothetical protein;protein_id=PDP41958.1;transl_table=11 NSLJ01000056.1 Genbank gene 6463 6792 . + . ID=gene-CLI86_13245;Name=CLI86_13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13245 NSLJ01000056.1 Protein Homology CDS 6463 6792 . + 0 ID=cds-PDP41959.1;Parent=gene-CLI86_13245;Dbxref=NCBI_GP:PDP41959.1;Name=PDP41959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225732.1;locus_tag=CLI86_13245;product=FKBP12 protein 1;protein_id=PDP41959.1;transl_table=11 NSLJ01000056.1 Genbank gene 6797 7351 . + . ID=gene-CLI86_13250;Name=CLI86_13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13250 NSLJ01000056.1 GeneMarkS+ CDS 6797 7351 . + 0 ID=cds-PDP41956.1;Parent=gene-CLI86_13250;Dbxref=NCBI_GP:PDP41956.1;Name=PDP41956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13250;product=hypothetical protein;protein_id=PDP41956.1;transl_table=11 NSLJ01000056.1 Genbank pseudogene 7453 8116 . - . ID=gene-CLI86_13255;Name=CLI86_13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13255;pseudo=true NSLJ01000056.1 Protein Homology CDS 7453 8116 . - 2 ID=cds-CLI86_13255;Parent=gene-CLI86_13255;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_13255;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000057.1 1 7102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000057.1 Genbank region 1 7102 . + . ID=NSLJ01000057.1:1..7102;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000057.1 Genbank pseudogene 5 139 . + . ID=gene-CLI86_13260;Name=CLI86_13260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13260;pseudo=true NSLJ01000057.1 Protein Homology CDS 5 139 . + 0 ID=cds-CLI86_13260;Parent=gene-CLI86_13260;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655620.1;locus_tag=CLI86_13260;product=S26 family signal peptidase;pseudo=true;transl_table=11 NSLJ01000057.1 Genbank gene 370 657 . + . ID=gene-CLI86_13265;Name=CLI86_13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13265 NSLJ01000057.1 Protein Homology CDS 370 657 . + 0 ID=cds-PDP41854.1;Parent=gene-CLI86_13265;Dbxref=NCBI_GP:PDP41854.1;Name=PDP41854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019539959.1;locus_tag=CLI86_13265;product=hypothetical protein;protein_id=PDP41854.1;transl_table=11 NSLJ01000057.1 Genbank gene 854 2077 . + . ID=gene-CLI86_13270;Name=CLI86_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13270 NSLJ01000057.1 Protein Homology CDS 854 2077 . + 0 ID=cds-PDP41850.1;Parent=gene-CLI86_13270;Dbxref=NCBI_GP:PDP41850.1;Name=PDP41850.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_13270;product=6-bladed beta-propeller;protein_id=PDP41850.1;transl_table=11 NSLJ01000057.1 Genbank pseudogene 2333 2440 . + . ID=gene-CLI86_13275;Name=CLI86_13275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13275;pseudo=true NSLJ01000057.1 Protein Homology CDS 2333 2440 . + 0 ID=cds-CLI86_13275;Parent=gene-CLI86_13275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223832.1;locus_tag=CLI86_13275;product=S26 family signal peptidase;pseudo=true;transl_table=11 NSLJ01000057.1 Genbank gene 2776 3081 . + . ID=gene-CLI86_13280;Name=CLI86_13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13280 NSLJ01000057.1 Protein Homology CDS 2776 3081 . + 0 ID=cds-PDP41855.1;Parent=gene-CLI86_13280;Dbxref=NCBI_GP:PDP41855.1;Name=PDP41855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019539959.1;locus_tag=CLI86_13280;product=hypothetical protein;protein_id=PDP41855.1;transl_table=11 NSLJ01000057.1 Genbank gene 3097 4182 . + . ID=gene-CLI86_13285;Name=CLI86_13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13285 NSLJ01000057.1 Protein Homology CDS 3097 4182 . + 0 ID=cds-PDP41851.1;Parent=gene-CLI86_13285;Dbxref=NCBI_GP:PDP41851.1;Name=PDP41851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223824.1;locus_tag=CLI86_13285;product=6-bladed beta-propeller;protein_id=PDP41851.1;transl_table=11 NSLJ01000057.1 Genbank gene 4455 4703 . + . ID=gene-CLI86_13290;Name=CLI86_13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13290 NSLJ01000057.1 Protein Homology CDS 4455 4703 . + 0 ID=cds-PDP41852.1;Parent=gene-CLI86_13290;Dbxref=NCBI_GP:PDP41852.1;Name=PDP41852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541469.1;locus_tag=CLI86_13290;product=hypothetical protein;protein_id=PDP41852.1;transl_table=11 NSLJ01000057.1 Genbank gene 4781 5833 . + . ID=gene-CLI86_13295;Name=CLI86_13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13295 NSLJ01000057.1 Protein Homology CDS 4781 5833 . + 0 ID=cds-PDP41853.1;Parent=gene-CLI86_13295;Dbxref=NCBI_GP:PDP41853.1;Name=PDP41853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15869.3;locus_tag=CLI86_13295;product=hypothetical protein;protein_id=PDP41853.1;transl_table=11 NSLJ01000057.1 Genbank gene 5991 6788 . + . ID=gene-CLI86_13300;Name=CLI86_13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13300 NSLJ01000057.1 Protein Homology CDS 5991 6788 . + 0 ID=cds-PDP41856.1;Parent=gene-CLI86_13300;Dbxref=NCBI_GP:PDP41856.1;Name=PDP41856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223830.1;locus_tag=CLI86_13300;product=hypothetical protein;protein_id=PDP41856.1;transl_table=11 NSLJ01000057.1 Genbank gene 6795 7102 . + . ID=gene-CLI86_13305;Name=CLI86_13305;end_range=7102,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13305;partial=true NSLJ01000057.1 Protein Homology CDS 6795 7102 . + 0 ID=cds-PDP41857.1;Parent=gene-CLI86_13305;Dbxref=NCBI_GP:PDP41857.1;Name=PDP41857.1;end_range=7102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223831.1;locus_tag=CLI86_13305;partial=true;product=polymerase;protein_id=PDP41857.1;transl_table=11 ##sequence-region NSLJ01000058.1 1 6963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000058.1 Genbank region 1 6963 . + . ID=NSLJ01000058.1:1..6963;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000058.1 Genbank gene 147 713 . + . ID=gene-CLI86_13310;Name=CLI86_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13310 NSLJ01000058.1 Protein Homology CDS 147 713 . + 0 ID=cds-PDP41848.1;Parent=gene-CLI86_13310;Dbxref=NCBI_GP:PDP41848.1;Name=PDP41848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155103.1;locus_tag=CLI86_13310;product=DUF1282 domain-containing protein;protein_id=PDP41848.1;transl_table=11 NSLJ01000058.1 Genbank gene 726 1190 . + . ID=gene-CLI86_13315;Name=CLI86_13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13315 NSLJ01000058.1 Protein Homology CDS 726 1190 . + 0 ID=cds-PDP41842.1;Parent=gene-CLI86_13315;Dbxref=NCBI_GP:PDP41842.1;Name=PDP41842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226105.1;locus_tag=CLI86_13315;product=SsrA-binding protein SmpB;protein_id=PDP41842.1;transl_table=11 NSLJ01000058.1 Genbank gene 1194 2153 . + . ID=gene-CLI86_13320;Name=CLI86_13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13320 NSLJ01000058.1 Protein Homology CDS 1194 2153 . + 0 ID=cds-PDP41843.1;Parent=gene-CLI86_13320;Dbxref=NCBI_GP:PDP41843.1;Name=PDP41843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226106.1;locus_tag=CLI86_13320;product=nucleoside recognition protein;protein_id=PDP41843.1;transl_table=11 NSLJ01000058.1 Genbank gene 2294 3613 . + . ID=gene-CLI86_13325;Name=CLI86_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13325 NSLJ01000058.1 Protein Homology CDS 2294 3613 . + 0 ID=cds-PDP41844.1;Parent=gene-CLI86_13325;Dbxref=NCBI_GP:PDP41844.1;Name=PDP41844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_13325;product=T9SS C-terminal target domain-containing protein;protein_id=PDP41844.1;transl_table=11 NSLJ01000058.1 Genbank gene 3806 4471 . + . ID=gene-CLI86_13330;Name=CLI86_13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13330 NSLJ01000058.1 Protein Homology CDS 3806 4471 . + 0 ID=cds-PDP41845.1;Parent=gene-CLI86_13330;Dbxref=NCBI_GP:PDP41845.1;Name=PDP41845.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226109.1;locus_tag=CLI86_13330;product=inorganic pyrophosphatase;protein_id=PDP41845.1;transl_table=11 NSLJ01000058.1 Genbank gene 4697 5287 . + . ID=gene-CLI86_13335;Name=CLI86_13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13335 NSLJ01000058.1 GeneMarkS+ CDS 4697 5287 . + 0 ID=cds-PDP41846.1;Parent=gene-CLI86_13335;Dbxref=NCBI_GP:PDP41846.1;Name=PDP41846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13335;product=hypothetical protein;protein_id=PDP41846.1;transl_table=11 NSLJ01000058.1 Genbank gene 5411 6574 . + . ID=gene-CLI86_13340;Name=CLI86_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13340 NSLJ01000058.1 Protein Homology CDS 5411 6574 . + 0 ID=cds-PDP41847.1;Parent=gene-CLI86_13340;Dbxref=NCBI_GP:PDP41847.1;Name=PDP41847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226111.1;locus_tag=CLI86_13340;product=sensor histidine kinase;protein_id=PDP41847.1;transl_table=11 NSLJ01000058.1 Genbank pseudogene 6713 6838 . + . ID=gene-CLI86_13345;Name=CLI86_13345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13345;pseudo=true NSLJ01000058.1 Protein Homology CDS 6713 6838 . + 0 ID=cds-CLI86_13345;Parent=gene-CLI86_13345;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226113.1;locus_tag=CLI86_13345;product=RNA polymerase subunit sigma-70;pseudo=true;transl_table=11 ##sequence-region NSLJ01000059.1 1 6942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000059.1 Genbank region 1 6942 . + . ID=NSLJ01000059.1:1..6942;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000059.1 Genbank gene 192 2036 . - . ID=gene-CLI86_13350;Name=CLI86_13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13350 NSLJ01000059.1 Protein Homology CDS 192 2036 . - 0 ID=cds-PDP41744.1;Parent=gene-CLI86_13350;Dbxref=NCBI_GP:PDP41744.1;Name=PDP41744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_13350;product=hypothetical protein;protein_id=PDP41744.1;transl_table=11 NSLJ01000059.1 Genbank gene 2033 2410 . - . ID=gene-CLI86_13355;Name=CLI86_13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13355 NSLJ01000059.1 GeneMarkS+ CDS 2033 2410 . - 0 ID=cds-PDP41745.1;Parent=gene-CLI86_13355;Dbxref=NCBI_GP:PDP41745.1;Name=PDP41745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13355;product=hypothetical protein;protein_id=PDP41745.1;transl_table=11 NSLJ01000059.1 Genbank gene 3374 5749 . - . ID=gene-CLI86_13360;Name=CLI86_13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13360 NSLJ01000059.1 Protein Homology CDS 3374 5749 . - 0 ID=cds-PDP41746.1;Parent=gene-CLI86_13360;Dbxref=NCBI_GP:PDP41746.1;Name=PDP41746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_13360;product=hypothetical protein;protein_id=PDP41746.1;transl_table=11 NSLJ01000059.1 Genbank gene 5746 6204 . - . ID=gene-CLI86_13365;Name=CLI86_13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13365 NSLJ01000059.1 GeneMarkS+ CDS 5746 6204 . - 0 ID=cds-PDP41747.1;Parent=gene-CLI86_13365;Dbxref=NCBI_GP:PDP41747.1;Name=PDP41747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13365;product=hypothetical protein;protein_id=PDP41747.1;transl_table=11 NSLJ01000059.1 Genbank gene 6259 6477 . - . ID=gene-CLI86_13370;Name=CLI86_13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13370 NSLJ01000059.1 Protein Homology CDS 6259 6477 . - 0 ID=cds-PDP41748.1;Parent=gene-CLI86_13370;Dbxref=NCBI_GP:PDP41748.1;Name=PDP41748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225802.1;locus_tag=CLI86_13370;product=hypothetical protein;protein_id=PDP41748.1;transl_table=11 NSLJ01000059.1 Genbank gene 6736 6942 . + . ID=gene-CLI86_13375;Name=CLI86_13375;end_range=6942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13375;partial=true NSLJ01000059.1 Protein Homology CDS 6736 6942 . + 0 ID=cds-PDP41749.1;Parent=gene-CLI86_13375;Dbxref=NCBI_GP:PDP41749.1;Name=PDP41749.1;end_range=6942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224580.1;locus_tag=CLI86_13375;partial=true;product=hypothetical protein;protein_id=PDP41749.1;transl_table=11 ##sequence-region NSLJ01000005.1 1 126324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000005.1 Genbank region 1 126324 . + . ID=NSLJ01000005.1:1..126324;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000005.1 Genbank pseudogene 123 797 . + . ID=gene-CLI86_02605;Name=CLI86_02605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02605;pseudo=true NSLJ01000005.1 Protein Homology CDS 123 797 . + 0 ID=cds-CLI86_02605;Parent=gene-CLI86_02605;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225895.1;locus_tag=CLI86_02605;product=endonuclease;pseudo=true;transl_table=11 NSLJ01000005.1 Genbank gene 815 2104 . - . ID=gene-CLI86_02610;Name=CLI86_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02610 NSLJ01000005.1 Protein Homology CDS 815 2104 . - 0 ID=cds-PDP44563.1;Parent=gene-CLI86_02610;Dbxref=NCBI_GP:PDP44563.1;Name=PDP44563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225896.1;locus_tag=CLI86_02610;product=NCS2 family permease;protein_id=PDP44563.1;transl_table=11 NSLJ01000005.1 Genbank gene 2131 2823 . - . ID=gene-CLI86_02615;Name=CLI86_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02615 NSLJ01000005.1 Protein Homology CDS 2131 2823 . - 0 ID=cds-PDP44564.1;Parent=gene-CLI86_02615;Dbxref=NCBI_GP:PDP44564.1;Name=PDP44564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225897.1;locus_tag=CLI86_02615;product=DUF5020 domain-containing protein;protein_id=PDP44564.1;transl_table=11 NSLJ01000005.1 Genbank gene 2827 3618 . - . ID=gene-CLI86_02620;Name=CLI86_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02620 NSLJ01000005.1 Protein Homology CDS 2827 3618 . - 0 ID=cds-PDP44565.1;Parent=gene-CLI86_02620;Dbxref=NCBI_GP:PDP44565.1;Name=PDP44565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225898.1;locus_tag=CLI86_02620;product=beta-glucanase;protein_id=PDP44565.1;transl_table=11 NSLJ01000005.1 Genbank gene 3630 3857 . - . ID=gene-CLI86_02625;Name=CLI86_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02625 NSLJ01000005.1 Protein Homology CDS 3630 3857 . - 0 ID=cds-PDP44566.1;Parent=gene-CLI86_02625;Dbxref=NCBI_GP:PDP44566.1;Name=PDP44566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225899.1;locus_tag=CLI86_02625;product=hypothetical protein;protein_id=PDP44566.1;transl_table=11 NSLJ01000005.1 Genbank gene 3871 5451 . - . ID=gene-CLI86_02630;Name=CLI86_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02630 NSLJ01000005.1 Protein Homology CDS 3871 5451 . - 0 ID=cds-PDP44567.1;Parent=gene-CLI86_02630;Dbxref=NCBI_GP:PDP44567.1;Name=PDP44567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225900.1;locus_tag=CLI86_02630;product=sulfatase;protein_id=PDP44567.1;transl_table=11 NSLJ01000005.1 Genbank gene 5518 5721 . - . ID=gene-CLI86_02635;Name=CLI86_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02635 NSLJ01000005.1 GeneMarkS+ CDS 5518 5721 . - 0 ID=cds-PDP44568.1;Parent=gene-CLI86_02635;Dbxref=NCBI_GP:PDP44568.1;Name=PDP44568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02635;product=hypothetical protein;protein_id=PDP44568.1;transl_table=11 NSLJ01000005.1 Genbank gene 5721 6296 . + . ID=gene-CLI86_02640;Name=CLI86_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02640 NSLJ01000005.1 Protein Homology CDS 5721 6296 . + 0 ID=cds-PDP44569.1;Parent=gene-CLI86_02640;Dbxref=NCBI_GP:PDP44569.1;Name=PDP44569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225902.1;locus_tag=CLI86_02640;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP44569.1;transl_table=11 NSLJ01000005.1 Genbank gene 6331 7749 . + . ID=gene-CLI86_02645;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=CLI86_02645 NSLJ01000005.1 Protein Homology CDS 6331 7749 . + 0 ID=cds-PDP44570.1;Parent=gene-CLI86_02645;Dbxref=NCBI_GP:PDP44570.1;Name=PDP44570.1;gbkey=CDS;gene=cobJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225903.1;locus_tag=CLI86_02645;product=precorrin-3B C(17)-methyltransferase;protein_id=PDP44570.1;transl_table=11 NSLJ01000005.1 Genbank gene 7764 8945 . + . ID=gene-CLI86_02650;Name=CLI86_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02650 NSLJ01000005.1 Protein Homology CDS 7764 8945 . + 0 ID=cds-PDP44658.1;Parent=gene-CLI86_02650;Dbxref=NCBI_GP:PDP44658.1;Name=PDP44658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016270483.1;locus_tag=CLI86_02650;product=cobalamin biosynthesis bifunctional protein CbiET;protein_id=PDP44658.1;transl_table=11 NSLJ01000005.1 Genbank gene 8942 10762 . + . ID=gene-CLI86_02655;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=CLI86_02655 NSLJ01000005.1 Protein Homology CDS 8942 10762 . + 0 ID=cds-PDP44571.1;Parent=gene-CLI86_02655;Dbxref=NCBI_GP:PDP44571.1;Name=PDP44571.1;gbkey=CDS;gene=cobM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225905.1;locus_tag=CLI86_02655;product=precorrin-4 C(11)-methyltransferase;protein_id=PDP44571.1;transl_table=11 NSLJ01000005.1 Genbank gene 10759 12567 . + . ID=gene-CLI86_02660;Name=CLI86_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02660 NSLJ01000005.1 Protein Homology CDS 10759 12567 . + 0 ID=cds-PDP44572.1;Parent=gene-CLI86_02660;Dbxref=NCBI_GP:PDP44572.1;Name=PDP44572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225906.1;locus_tag=CLI86_02660;product=precorrin-6x reductase;protein_id=PDP44572.1;transl_table=11 NSLJ01000005.1 Genbank gene 12725 14626 . + . ID=gene-CLI86_02665;Name=CLI86_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02665 NSLJ01000005.1 Protein Homology CDS 12725 14626 . + 0 ID=cds-PDP44573.1;Parent=gene-CLI86_02665;Dbxref=NCBI_GP:PDP44573.1;Name=PDP44573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225907.1;locus_tag=CLI86_02665;product=amidophosphoribosyltransferase;protein_id=PDP44573.1;transl_table=11 NSLJ01000005.1 Genbank gene 14667 15197 . + . ID=gene-CLI86_02670;Name=CLI86_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02670 NSLJ01000005.1 Protein Homology CDS 14667 15197 . + 0 ID=cds-PDP44574.1;Parent=gene-CLI86_02670;Dbxref=NCBI_GP:PDP44574.1;Name=PDP44574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225908.1;locus_tag=CLI86_02670;product=N-acetyltransferase;protein_id=PDP44574.1;transl_table=11 NSLJ01000005.1 Genbank gene 16738 17031 . - . ID=gene-CLI86_02675;Name=CLI86_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02675 NSLJ01000005.1 Protein Homology CDS 16738 17031 . - 0 ID=cds-PDP44575.1;Parent=gene-CLI86_02675;Dbxref=NCBI_GP:PDP44575.1;Name=PDP44575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225912.1;locus_tag=CLI86_02675;product=hypothetical protein;protein_id=PDP44575.1;transl_table=11 NSLJ01000005.1 Genbank gene 17035 20202 . - . ID=gene-CLI86_02680;Name=CLI86_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02680 NSLJ01000005.1 Protein Homology CDS 17035 20202 . - 0 ID=cds-PDP44576.1;Parent=gene-CLI86_02680;Dbxref=NCBI_GP:PDP44576.1;Name=PDP44576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225913.1;locus_tag=CLI86_02680;product=multidrug transporter AcrB;protein_id=PDP44576.1;transl_table=11 NSLJ01000005.1 Genbank gene 20269 21303 . - . ID=gene-CLI86_02685;Name=CLI86_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02685 NSLJ01000005.1 Protein Homology CDS 20269 21303 . - 0 ID=cds-PDP44577.1;Parent=gene-CLI86_02685;Dbxref=NCBI_GP:PDP44577.1;Name=PDP44577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225914.1;locus_tag=CLI86_02685;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP44577.1;transl_table=11 NSLJ01000005.1 Genbank gene 21326 22807 . - . ID=gene-CLI86_02690;Name=CLI86_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02690 NSLJ01000005.1 Protein Homology CDS 21326 22807 . - 0 ID=cds-PDP44578.1;Parent=gene-CLI86_02690;Dbxref=NCBI_GP:PDP44578.1;Name=PDP44578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225915.1;locus_tag=CLI86_02690;product=transporter;protein_id=PDP44578.1;transl_table=11 NSLJ01000005.1 Genbank gene 22954 23973 . + . ID=gene-CLI86_02695;Name=CLI86_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02695 NSLJ01000005.1 Protein Homology CDS 22954 23973 . + 0 ID=cds-PDP44579.1;Parent=gene-CLI86_02695;Dbxref=NCBI_GP:PDP44579.1;Name=PDP44579.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CLI86_02695;product=AraC family transcriptional regulator;protein_id=PDP44579.1;transl_table=11 NSLJ01000005.1 Genbank gene 24164 24610 . - . ID=gene-CLI86_02700;Name=CLI86_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02700 NSLJ01000005.1 Protein Homology CDS 24164 24610 . - 0 ID=cds-PDP44580.1;Parent=gene-CLI86_02700;Dbxref=NCBI_GP:PDP44580.1;Name=PDP44580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225917.1;locus_tag=CLI86_02700;product=hypothetical protein;protein_id=PDP44580.1;transl_table=11 NSLJ01000005.1 Genbank gene 24668 26224 . - . ID=gene-CLI86_02705;Name=CLI86_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02705 NSLJ01000005.1 Protein Homology CDS 24668 26224 . - 0 ID=cds-PDP44659.1;Parent=gene-CLI86_02705;Dbxref=NCBI_GP:PDP44659.1;Name=PDP44659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016662741.1;locus_tag=CLI86_02705;product=MFS transporter;protein_id=PDP44659.1;transl_table=11 NSLJ01000005.1 Genbank gene 26282 27352 . - . ID=gene-CLI86_02710;Name=CLI86_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02710 NSLJ01000005.1 Protein Homology CDS 26282 27352 . - 0 ID=cds-PDP44581.1;Parent=gene-CLI86_02710;Dbxref=NCBI_GP:PDP44581.1;Name=PDP44581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005641351.1;locus_tag=CLI86_02710;product=DUF4831 domain-containing protein;protein_id=PDP44581.1;transl_table=11 NSLJ01000005.1 Genbank gene 27455 27772 . + . ID=gene-CLI86_02715;Name=CLI86_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02715 NSLJ01000005.1 Protein Homology CDS 27455 27772 . + 0 ID=cds-PDP44582.1;Parent=gene-CLI86_02715;Dbxref=NCBI_GP:PDP44582.1;Name=PDP44582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637128.1;locus_tag=CLI86_02715;product=DUF3467 domain-containing protein;protein_id=PDP44582.1;transl_table=11 NSLJ01000005.1 Genbank gene 27769 28731 . - . ID=gene-CLI86_02720;Name=CLI86_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02720 NSLJ01000005.1 Protein Homology CDS 27769 28731 . - 0 ID=cds-PDP44583.1;Parent=gene-CLI86_02720;Dbxref=NCBI_GP:PDP44583.1;Name=PDP44583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225921.1;locus_tag=CLI86_02720;product=acetylornithine carbamoyltransferase;protein_id=PDP44583.1;transl_table=11 NSLJ01000005.1 Genbank gene 28956 29903 . + . ID=gene-CLI86_02725;Name=CLI86_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02725 NSLJ01000005.1 Protein Homology CDS 28956 29903 . + 0 ID=cds-PDP44584.1;Parent=gene-CLI86_02725;Dbxref=NCBI_GP:PDP44584.1;Name=PDP44584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225922.1;locus_tag=CLI86_02725;product=RNA polymerase subunit sigma;protein_id=PDP44584.1;transl_table=11 NSLJ01000005.1 Genbank gene 30026 33244 . + . ID=gene-CLI86_02730;Name=CLI86_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02730 NSLJ01000005.1 Protein Homology CDS 30026 33244 . + 0 ID=cds-PDP44585.1;Parent=gene-CLI86_02730;Dbxref=NCBI_GP:PDP44585.1;Name=PDP44585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225924.1;locus_tag=CLI86_02730;product=SusC/RagA family protein;protein_id=PDP44585.1;transl_table=11 NSLJ01000005.1 Genbank gene 33256 35001 . + . ID=gene-CLI86_02735;Name=CLI86_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02735 NSLJ01000005.1 Protein Homology CDS 33256 35001 . + 0 ID=cds-PDP44586.1;Parent=gene-CLI86_02735;Dbxref=NCBI_GP:PDP44586.1;Name=PDP44586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007840827.1;locus_tag=CLI86_02735;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44586.1;transl_table=11 NSLJ01000005.1 Genbank gene 35050 36531 . + . ID=gene-CLI86_02740;Name=CLI86_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02740 NSLJ01000005.1 Protein Homology CDS 35050 36531 . + 0 ID=cds-PDP44660.1;Parent=gene-CLI86_02740;Dbxref=NCBI_GP:PDP44660.1;Name=PDP44660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008627349.1;locus_tag=CLI86_02740;product=beta-glycosidase;protein_id=PDP44660.1;transl_table=11 NSLJ01000005.1 Genbank gene 36572 36766 . - . ID=gene-CLI86_02745;Name=CLI86_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02745 NSLJ01000005.1 Protein Homology CDS 36572 36766 . - 0 ID=cds-PDP44587.1;Parent=gene-CLI86_02745;Dbxref=NCBI_GP:PDP44587.1;Name=PDP44587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225927.1;locus_tag=CLI86_02745;product=hypothetical protein;protein_id=PDP44587.1;transl_table=11 NSLJ01000005.1 Genbank gene 37035 37766 . + . ID=gene-CLI86_02750;Name=CLI86_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02750 NSLJ01000005.1 Protein Homology CDS 37035 37766 . + 0 ID=cds-PDP44588.1;Parent=gene-CLI86_02750;Dbxref=NCBI_GP:PDP44588.1;Name=PDP44588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007218454.1;locus_tag=CLI86_02750;product=DNA mismatch repair protein MutT;protein_id=PDP44588.1;transl_table=11 NSLJ01000005.1 Genbank gene 37819 39306 . + . ID=gene-CLI86_02755;Name=CLI86_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02755 NSLJ01000005.1 Protein Homology CDS 37819 39306 . + 0 ID=cds-PDP44589.1;Parent=gene-CLI86_02755;Dbxref=NCBI_GP:PDP44589.1;Name=PDP44589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225929.1;locus_tag=CLI86_02755;product=carbohydrate kinase;protein_id=PDP44589.1;transl_table=11 NSLJ01000005.1 Genbank gene 39355 40674 . + . ID=gene-CLI86_02760;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CLI86_02760 NSLJ01000005.1 Protein Homology CDS 39355 40674 . + 0 ID=cds-PDP44590.1;Parent=gene-CLI86_02760;Dbxref=NCBI_GP:PDP44590.1;Name=PDP44590.1;gbkey=CDS;gene=xylA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011107447.1;locus_tag=CLI86_02760;product=xylose isomerase;protein_id=PDP44590.1;transl_table=11 NSLJ01000005.1 Genbank gene 40700 42199 . + . ID=gene-CLI86_02765;Name=CLI86_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02765 NSLJ01000005.1 Protein Homology CDS 40700 42199 . + 0 ID=cds-PDP44591.1;Parent=gene-CLI86_02765;Dbxref=NCBI_GP:PDP44591.1;Name=PDP44591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225931.1;locus_tag=CLI86_02765;product=D-xylose transporter XylE;protein_id=PDP44591.1;transl_table=11 NSLJ01000005.1 Genbank gene 42335 42526 . + . ID=gene-CLI86_02770;Name=CLI86_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02770 NSLJ01000005.1 GeneMarkS+ CDS 42335 42526 . + 0 ID=cds-PDP44592.1;Parent=gene-CLI86_02770;Dbxref=NCBI_GP:PDP44592.1;Name=PDP44592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02770;product=hypothetical protein;protein_id=PDP44592.1;transl_table=11 NSLJ01000005.1 Genbank pseudogene 42741 43219 . + . ID=gene-CLI86_02775;Name=CLI86_02775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02775;pseudo=true NSLJ01000005.1 Protein Homology CDS 42741 43219 . + 0 ID=cds-CLI86_02775;Parent=gene-CLI86_02775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225922.1;locus_tag=CLI86_02775;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000005.1 Genbank gene 43267 46731 . + . ID=gene-CLI86_02780;Name=CLI86_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02780 NSLJ01000005.1 Protein Homology CDS 43267 46731 . + 0 ID=cds-PDP44593.1;Parent=gene-CLI86_02780;Dbxref=NCBI_GP:PDP44593.1;Name=PDP44593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_02780;product=hypothetical protein;protein_id=PDP44593.1;transl_table=11 NSLJ01000005.1 Genbank gene 46744 48390 . + . ID=gene-CLI86_02785;Name=CLI86_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02785 NSLJ01000005.1 Protein Homology CDS 46744 48390 . + 0 ID=cds-PDP44594.1;Parent=gene-CLI86_02785;Dbxref=NCBI_GP:PDP44594.1;Name=PDP44594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014775728.1;locus_tag=CLI86_02785;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44594.1;transl_table=11 NSLJ01000005.1 Genbank gene 48381 50036 . + . ID=gene-CLI86_02790;Name=CLI86_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02790 NSLJ01000005.1 Protein Homology CDS 48381 50036 . + 0 ID=cds-PDP44595.1;Parent=gene-CLI86_02790;Dbxref=NCBI_GP:PDP44595.1;Name=PDP44595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16410.3;locus_tag=CLI86_02790;product=hypothetical protein;protein_id=PDP44595.1;transl_table=11 NSLJ01000005.1 Genbank gene 50069 51484 . + . ID=gene-CLI86_02795;Name=CLI86_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02795 NSLJ01000005.1 Protein Homology CDS 50069 51484 . + 0 ID=cds-PDP44596.1;Parent=gene-CLI86_02795;Dbxref=NCBI_GP:PDP44596.1;Name=PDP44596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225935.1;locus_tag=CLI86_02795;product=S-layer protein;protein_id=PDP44596.1;transl_table=11 NSLJ01000005.1 Genbank gene 51539 52999 . + . ID=gene-CLI86_02800;Name=CLI86_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02800 NSLJ01000005.1 Protein Homology CDS 51539 52999 . + 0 ID=cds-PDP44597.1;Parent=gene-CLI86_02800;Dbxref=NCBI_GP:PDP44597.1;Name=PDP44597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225936.1;locus_tag=CLI86_02800;product=serine/threonine protein phosphatase;protein_id=PDP44597.1;transl_table=11 NSLJ01000005.1 Genbank gene 53645 53866 . - . ID=gene-CLI86_02805;Name=CLI86_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02805 NSLJ01000005.1 GeneMarkS+ CDS 53645 53866 . - 0 ID=cds-PDP44598.1;Parent=gene-CLI86_02805;Dbxref=NCBI_GP:PDP44598.1;Name=PDP44598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02805;product=hypothetical protein;protein_id=PDP44598.1;transl_table=11 NSLJ01000005.1 Genbank gene 54263 54478 . + . ID=gene-CLI86_02810;Name=CLI86_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02810 NSLJ01000005.1 GeneMarkS+ CDS 54263 54478 . + 0 ID=cds-PDP44599.1;Parent=gene-CLI86_02810;Dbxref=NCBI_GP:PDP44599.1;Name=PDP44599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02810;product=hypothetical protein;protein_id=PDP44599.1;transl_table=11 NSLJ01000005.1 Genbank gene 54586 54822 . + . ID=gene-CLI86_02815;Name=CLI86_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02815 NSLJ01000005.1 Protein Homology CDS 54586 54822 . + 0 ID=cds-PDP44600.1;Parent=gene-CLI86_02815;Dbxref=NCBI_GP:PDP44600.1;Name=PDP44600.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14055.4;locus_tag=CLI86_02815;product=hypothetical protein;protein_id=PDP44600.1;transl_table=11 NSLJ01000005.1 Genbank gene 54962 56002 . + . ID=gene-CLI86_02820;Name=CLI86_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02820 NSLJ01000005.1 Protein Homology CDS 54962 56002 . + 0 ID=cds-PDP44601.1;Parent=gene-CLI86_02820;Dbxref=NCBI_GP:PDP44601.1;Name=PDP44601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_02820;product=6-bladed beta-propeller;protein_id=PDP44601.1;transl_table=11 NSLJ01000005.1 Genbank gene 56136 56375 . - . ID=gene-CLI86_02825;Name=CLI86_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02825 NSLJ01000005.1 GeneMarkS+ CDS 56136 56375 . - 0 ID=cds-PDP44602.1;Parent=gene-CLI86_02825;Dbxref=NCBI_GP:PDP44602.1;Name=PDP44602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02825;product=hypothetical protein;protein_id=PDP44602.1;transl_table=11 NSLJ01000005.1 Genbank pseudogene 56543 56800 . + . ID=gene-CLI86_02830;Name=CLI86_02830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_02830;pseudo=true NSLJ01000005.1 Protein Homology CDS 56543 56800 . + 0 ID=cds-CLI86_02830;Parent=gene-CLI86_02830;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009416863.1;locus_tag=CLI86_02830;product=hexulose-6-phosphate isomerase;pseudo=true;transl_table=11 NSLJ01000005.1 Genbank gene 56804 57139 . + . ID=gene-CLI86_02835;Name=CLI86_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02835 NSLJ01000005.1 Protein Homology CDS 56804 57139 . + 0 ID=cds-PDP44603.1;Parent=gene-CLI86_02835;Dbxref=NCBI_GP:PDP44603.1;Name=PDP44603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225942.1;locus_tag=CLI86_02835;product=toxin-antitoxin system HicB family antitoxin;protein_id=PDP44603.1;transl_table=11 NSLJ01000005.1 Genbank gene 57326 57401 . - . ID=gene-CLI86_02840;Name=CLI86_02840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_02840 NSLJ01000005.1 tRNAscan-SE tRNA 57326 57401 . - . ID=rna-CLI86_02840;Parent=gene-CLI86_02840;anticodon=(pos:complement(57366..57368));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_02840;product=tRNA-Gly NSLJ01000005.1 tRNAscan-SE exon 57326 57401 . - . ID=exon-CLI86_02840-1;Parent=rna-CLI86_02840;anticodon=(pos:complement(57366..57368));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_02840;product=tRNA-Gly NSLJ01000005.1 Genbank gene 57475 58242 . + . ID=gene-CLI86_02845;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CLI86_02845 NSLJ01000005.1 Protein Homology CDS 57475 58242 . + 0 ID=cds-PDP44604.1;Parent=gene-CLI86_02845;Dbxref=NCBI_GP:PDP44604.1;Name=PDP44604.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225944.1;locus_tag=CLI86_02845;product=acetylglutamate kinase;protein_id=PDP44604.1;transl_table=11 NSLJ01000005.1 Genbank gene 58262 60079 . - . ID=gene-CLI86_02850;Name=CLI86_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02850 NSLJ01000005.1 Protein Homology CDS 58262 60079 . - 0 ID=cds-PDP44605.1;Parent=gene-CLI86_02850;Dbxref=NCBI_GP:PDP44605.1;Name=PDP44605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008772384.1;locus_tag=CLI86_02850;product=YgiQ family radical SAM protein;protein_id=PDP44605.1;transl_table=11 NSLJ01000005.1 Genbank gene 60076 60879 . - . ID=gene-CLI86_02855;Name=CLI86_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02855 NSLJ01000005.1 Protein Homology CDS 60076 60879 . - 0 ID=cds-PDP44606.1;Parent=gene-CLI86_02855;Dbxref=NCBI_GP:PDP44606.1;Name=PDP44606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225945.1;locus_tag=CLI86_02855;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=PDP44606.1;transl_table=11 NSLJ01000005.1 Genbank gene 60884 62197 . - . ID=gene-CLI86_02860;Name=CLI86_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02860 NSLJ01000005.1 Protein Homology CDS 60884 62197 . - 0 ID=cds-PDP44607.1;Parent=gene-CLI86_02860;Dbxref=NCBI_GP:PDP44607.1;Name=PDP44607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225946.1;locus_tag=CLI86_02860;product=ATP-dependent helicase;protein_id=PDP44607.1;transl_table=11 NSLJ01000005.1 Genbank gene 62211 63251 . - . ID=gene-CLI86_02865;Name=CLI86_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02865 NSLJ01000005.1 Protein Homology CDS 62211 63251 . - 0 ID=cds-PDP44608.1;Parent=gene-CLI86_02865;Dbxref=NCBI_GP:PDP44608.1;Name=PDP44608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225947.1;locus_tag=CLI86_02865;product=glutamine ABC transporter substrate-binding protein;protein_id=PDP44608.1;transl_table=11 NSLJ01000005.1 Genbank gene 63255 65387 . - . ID=gene-CLI86_02870;Name=CLI86_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02870 NSLJ01000005.1 Protein Homology CDS 63255 65387 . - 0 ID=cds-PDP44609.1;Parent=gene-CLI86_02870;Dbxref=NCBI_GP:PDP44609.1;Name=PDP44609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147355.1;locus_tag=CLI86_02870;product=hypothetical protein;protein_id=PDP44609.1;transl_table=11 NSLJ01000005.1 Genbank gene 65432 65974 . - . ID=gene-CLI86_02875;Name=CLI86_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02875 NSLJ01000005.1 Protein Homology CDS 65432 65974 . - 0 ID=cds-PDP44610.1;Parent=gene-CLI86_02875;Dbxref=NCBI_GP:PDP44610.1;Name=PDP44610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654927.1;locus_tag=CLI86_02875;product=2-oxoglutarate ferredoxin oxidoreductase subunit gamma;protein_id=PDP44610.1;transl_table=11 NSLJ01000005.1 Genbank gene 65995 66756 . - . ID=gene-CLI86_02880;Name=CLI86_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02880 NSLJ01000005.1 Protein Homology CDS 65995 66756 . - 0 ID=cds-PDP44611.1;Parent=gene-CLI86_02880;Dbxref=NCBI_GP:PDP44611.1;Name=PDP44611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856318.1;locus_tag=CLI86_02880;product=2-oxoglutarate oxidoreductase;protein_id=PDP44611.1;transl_table=11 NSLJ01000005.1 Genbank gene 66964 68040 . - . ID=gene-CLI86_02885;Name=CLI86_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02885 NSLJ01000005.1 Protein Homology CDS 66964 68040 . - 0 ID=cds-PDP44612.1;Parent=gene-CLI86_02885;Dbxref=NCBI_GP:PDP44612.1;Name=PDP44612.1;Note=catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225952.1;locus_tag=CLI86_02885;product=3-methyl-2-oxobutanoate dehydrogenase subunit VorB;protein_id=PDP44612.1;transl_table=11 NSLJ01000005.1 Genbank gene 68045 68275 . - . ID=gene-CLI86_02890;Name=CLI86_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02890 NSLJ01000005.1 Protein Homology CDS 68045 68275 . - 0 ID=cds-PDP44613.1;Parent=gene-CLI86_02890;Dbxref=NCBI_GP:PDP44613.1;Name=PDP44613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842397.1;locus_tag=CLI86_02890;product=ferredoxin;protein_id=PDP44613.1;transl_table=11 NSLJ01000005.1 Genbank gene 68335 68793 . - . ID=gene-CLI86_02895;Name=CLI86_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02895 NSLJ01000005.1 Protein Homology CDS 68335 68793 . - 0 ID=cds-PDP44614.1;Parent=gene-CLI86_02895;Dbxref=NCBI_GP:PDP44614.1;Name=PDP44614.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10825.6;locus_tag=CLI86_02895;product=DUF2752 domain-containing protein;protein_id=PDP44614.1;transl_table=11 NSLJ01000005.1 Genbank gene 68797 69351 . - . ID=gene-CLI86_02900;Name=CLI86_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02900 NSLJ01000005.1 Protein Homology CDS 68797 69351 . - 0 ID=cds-PDP44615.1;Parent=gene-CLI86_02900;Dbxref=NCBI_GP:PDP44615.1;Name=PDP44615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006865366.1;locus_tag=CLI86_02900;product=hypothetical protein;protein_id=PDP44615.1;transl_table=11 NSLJ01000005.1 Genbank gene 69537 70469 . - . ID=gene-CLI86_02905;Name=CLI86_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02905 NSLJ01000005.1 Protein Homology CDS 69537 70469 . - 0 ID=cds-PDP44616.1;Parent=gene-CLI86_02905;Dbxref=NCBI_GP:PDP44616.1;Name=PDP44616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225956.1;locus_tag=CLI86_02905;product=DUF368 domain-containing protein;protein_id=PDP44616.1;transl_table=11 NSLJ01000005.1 Genbank gene 70474 71583 . - . ID=gene-CLI86_02910;Name=CLI86_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02910 NSLJ01000005.1 Protein Homology CDS 70474 71583 . - 0 ID=cds-PDP44617.1;Parent=gene-CLI86_02910;Dbxref=NCBI_GP:PDP44617.1;Name=PDP44617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13432.4;locus_tag=CLI86_02910;product=hypothetical protein;protein_id=PDP44617.1;transl_table=11 NSLJ01000005.1 Genbank gene 71623 73329 . - . ID=gene-CLI86_02915;Name=CLI86_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02915 NSLJ01000005.1 Protein Homology CDS 71623 73329 . - 0 ID=cds-PDP44618.1;Parent=gene-CLI86_02915;Dbxref=NCBI_GP:PDP44618.1;Name=PDP44618.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225958.1;locus_tag=CLI86_02915;product=glutamine--tRNA ligase;protein_id=PDP44618.1;transl_table=11 NSLJ01000005.1 Genbank gene 73547 74587 . - . ID=gene-CLI86_02920;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CLI86_02920 NSLJ01000005.1 Protein Homology CDS 73547 74587 . - 0 ID=cds-PDP44619.1;Parent=gene-CLI86_02920;Dbxref=NCBI_GP:PDP44619.1;Name=PDP44619.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645954.1;locus_tag=CLI86_02920;product=thiamine-phosphate kinase;protein_id=PDP44619.1;transl_table=11 NSLJ01000005.1 Genbank gene 74599 75699 . - . ID=gene-CLI86_02925;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CLI86_02925 NSLJ01000005.1 Protein Homology CDS 74599 75699 . - 0 ID=cds-PDP44620.1;Parent=gene-CLI86_02925;Dbxref=NCBI_GP:PDP44620.1;Name=PDP44620.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225961.1;locus_tag=CLI86_02925;product=tetraacyldisaccharide 4'-kinase;protein_id=PDP44620.1;transl_table=11 NSLJ01000005.1 Genbank gene 75718 77496 . - . ID=gene-CLI86_02930;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CLI86_02930 NSLJ01000005.1 Protein Homology CDS 75718 77496 . - 0 ID=cds-PDP44621.1;Parent=gene-CLI86_02930;Dbxref=NCBI_GP:PDP44621.1;Name=PDP44621.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008778528.1;locus_tag=CLI86_02930;product=signal peptide peptidase SppA;protein_id=PDP44621.1;transl_table=11 NSLJ01000005.1 Genbank gene 77756 79105 . + . ID=gene-CLI86_02935;Name=CLI86_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02935 NSLJ01000005.1 Protein Homology CDS 77756 79105 . + 0 ID=cds-PDP44622.1;Parent=gene-CLI86_02935;Dbxref=NCBI_GP:PDP44622.1;Name=PDP44622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101085.1;locus_tag=CLI86_02935;product=MATE family efflux transporter;protein_id=PDP44622.1;transl_table=11 NSLJ01000005.1 Genbank gene 79112 79354 . - . ID=gene-CLI86_02940;Name=CLI86_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02940 NSLJ01000005.1 GeneMarkS+ CDS 79112 79354 . - 0 ID=cds-PDP44623.1;Parent=gene-CLI86_02940;Dbxref=NCBI_GP:PDP44623.1;Name=PDP44623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02940;product=hypothetical protein;protein_id=PDP44623.1;transl_table=11 NSLJ01000005.1 Genbank gene 79519 81720 . - . ID=gene-CLI86_02945;Name=CLI86_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02945 NSLJ01000005.1 Protein Homology CDS 79519 81720 . - 0 ID=cds-PDP44624.1;Parent=gene-CLI86_02945;Dbxref=NCBI_GP:PDP44624.1;Name=PDP44624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00326.19;locus_tag=CLI86_02945;product=hypothetical protein;protein_id=PDP44624.1;transl_table=11 NSLJ01000005.1 Genbank gene 81795 82194 . + . ID=gene-CLI86_02950;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CLI86_02950 NSLJ01000005.1 cmsearch tmRNA 81795 82194 . + . ID=rna-CLI86_02950;Parent=gene-CLI86_02950;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_02950;product=transfer-messenger RNA NSLJ01000005.1 cmsearch exon 81795 82194 . + . ID=exon-CLI86_02950-1;Parent=rna-CLI86_02950;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_02950;product=transfer-messenger RNA NSLJ01000005.1 Genbank gene 82204 85206 . - . ID=gene-CLI86_02955;Name=CLI86_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02955 NSLJ01000005.1 Protein Homology CDS 82204 85206 . - 0 ID=cds-PDP44625.1;Parent=gene-CLI86_02955;Dbxref=NCBI_GP:PDP44625.1;Name=PDP44625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006951225.1;locus_tag=CLI86_02955;product=AraC family transcriptional regulator;protein_id=PDP44625.1;transl_table=11 NSLJ01000005.1 Genbank gene 85511 85846 . + . ID=gene-CLI86_02960;Name=CLI86_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02960 NSLJ01000005.1 Protein Homology CDS 85511 85846 . + 0 ID=cds-PDP44626.1;Parent=gene-CLI86_02960;Dbxref=NCBI_GP:PDP44626.1;Name=PDP44626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008565761.1;locus_tag=CLI86_02960;product=hypothetical protein;protein_id=PDP44626.1;transl_table=11 NSLJ01000005.1 Genbank gene 85963 86301 . + . ID=gene-CLI86_02965;Name=CLI86_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02965 NSLJ01000005.1 GeneMarkS+ CDS 85963 86301 . + 0 ID=cds-PDP44627.1;Parent=gene-CLI86_02965;Dbxref=NCBI_GP:PDP44627.1;Name=PDP44627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_02965;product=hypothetical protein;protein_id=PDP44627.1;transl_table=11 NSLJ01000005.1 Genbank gene 86391 87860 . + . ID=gene-CLI86_02970;Name=CLI86_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02970 NSLJ01000005.1 Protein Homology CDS 86391 87860 . + 0 ID=cds-PDP44628.1;Parent=gene-CLI86_02970;Dbxref=NCBI_GP:PDP44628.1;Name=PDP44628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225974.1;locus_tag=CLI86_02970;product=hypothetical protein;protein_id=PDP44628.1;transl_table=11 NSLJ01000005.1 Genbank gene 88222 90042 . + . ID=gene-CLI86_02975;Name=CLI86_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02975 NSLJ01000005.1 Protein Homology CDS 88222 90042 . + 0 ID=cds-PDP44629.1;Parent=gene-CLI86_02975;Dbxref=NCBI_GP:PDP44629.1;Name=PDP44629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13004.5;locus_tag=CLI86_02975;product=hypothetical protein;protein_id=PDP44629.1;transl_table=11 NSLJ01000005.1 Genbank gene 90335 91468 . + . ID=gene-CLI86_02980;Name=CLI86_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02980 NSLJ01000005.1 Protein Homology CDS 90335 91468 . + 0 ID=cds-PDP44630.1;Parent=gene-CLI86_02980;Dbxref=NCBI_GP:PDP44630.1;Name=PDP44630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225979.1;locus_tag=CLI86_02980;product=hypothetical protein;protein_id=PDP44630.1;transl_table=11 NSLJ01000005.1 Genbank gene 91522 94830 . + . ID=gene-CLI86_02985;Name=CLI86_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02985 NSLJ01000005.1 Protein Homology CDS 91522 94830 . + 0 ID=cds-PDP44631.1;Parent=gene-CLI86_02985;Dbxref=NCBI_GP:PDP44631.1;Name=PDP44631.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00041.19%2CHMM:PF02368.16;locus_tag=CLI86_02985;product=hypothetical protein;protein_id=PDP44631.1;transl_table=11 NSLJ01000005.1 Genbank gene 94905 95216 . - . ID=gene-CLI86_02990;Name=CLI86_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_02990 NSLJ01000005.1 Protein Homology CDS 94905 95216 . - 0 ID=cds-PDP44632.1;Parent=gene-CLI86_02990;Dbxref=NCBI_GP:PDP44632.1;Name=PDP44632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224792.1;locus_tag=CLI86_02990;product=hypothetical protein;protein_id=PDP44632.1;transl_table=11 NSLJ01000005.1 Genbank gene 95359 98211 . - . ID=gene-CLI86_02995;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CLI86_02995 NSLJ01000005.1 Protein Homology CDS 95359 98211 . - 0 ID=cds-PDP44633.1;Parent=gene-CLI86_02995;Dbxref=NCBI_GP:PDP44633.1;Name=PDP44633.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225982.1;locus_tag=CLI86_02995;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=PDP44633.1;transl_table=11 NSLJ01000005.1 Genbank gene 98229 98867 . - . ID=gene-CLI86_03000;Name=CLI86_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03000 NSLJ01000005.1 Protein Homology CDS 98229 98867 . - 0 ID=cds-PDP44634.1;Parent=gene-CLI86_03000;Dbxref=NCBI_GP:PDP44634.1;Name=PDP44634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008771678.1;locus_tag=CLI86_03000;product=MBL fold hydrolase;protein_id=PDP44634.1;transl_table=11 NSLJ01000005.1 Genbank gene 98864 99484 . - . ID=gene-CLI86_03005;Name=CLI86_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03005 NSLJ01000005.1 Protein Homology CDS 98864 99484 . - 0 ID=cds-PDP44635.1;Parent=gene-CLI86_03005;Dbxref=NCBI_GP:PDP44635.1;Name=PDP44635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007659413.1;locus_tag=CLI86_03005;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=PDP44635.1;transl_table=11 NSLJ01000005.1 Genbank gene 99488 100336 . - . ID=gene-CLI86_03010;Name=CLI86_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03010 NSLJ01000005.1 Protein Homology CDS 99488 100336 . - 0 ID=cds-PDP44636.1;Parent=gene-CLI86_03010;Dbxref=NCBI_GP:PDP44636.1;Name=PDP44636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225985.1;locus_tag=CLI86_03010;product=DUF3298 domain-containing protein;protein_id=PDP44636.1;transl_table=11 NSLJ01000005.1 Genbank gene 100639 103206 . + . ID=gene-CLI86_03015;Name=CLI86_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03015 NSLJ01000005.1 Protein Homology CDS 100639 103206 . + 0 ID=cds-PDP44637.1;Parent=gene-CLI86_03015;Dbxref=NCBI_GP:PDP44637.1;Name=PDP44637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225987.1;locus_tag=CLI86_03015;product=DNA gyrase subunit A;protein_id=PDP44637.1;transl_table=11 NSLJ01000005.1 Genbank gene 103234 104451 . + . ID=gene-CLI86_03020;Name=CLI86_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03020 NSLJ01000005.1 Protein Homology CDS 103234 104451 . + 0 ID=cds-PDP44638.1;Parent=gene-CLI86_03020;Dbxref=NCBI_GP:PDP44638.1;Name=PDP44638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856958.1;locus_tag=CLI86_03020;product=hypothetical protein;protein_id=PDP44638.1;transl_table=11 NSLJ01000005.1 Genbank gene 104562 105689 . - . ID=gene-CLI86_03025;Name=CLI86_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03025 NSLJ01000005.1 Protein Homology CDS 104562 105689 . - 0 ID=cds-PDP44639.1;Parent=gene-CLI86_03025;Dbxref=NCBI_GP:PDP44639.1;Name=PDP44639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225989.1;locus_tag=CLI86_03025;product=universal stress protein;protein_id=PDP44639.1;transl_table=11 NSLJ01000005.1 Genbank gene 105692 105955 . - . ID=gene-CLI86_03030;Name=CLI86_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03030 NSLJ01000005.1 Protein Homology CDS 105692 105955 . - 0 ID=cds-PDP44640.1;Parent=gene-CLI86_03030;Dbxref=NCBI_GP:PDP44640.1;Name=PDP44640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225990.1;locus_tag=CLI86_03030;product=DNA-binding protein;protein_id=PDP44640.1;transl_table=11 NSLJ01000005.1 Genbank gene 106092 106799 . - . ID=gene-CLI86_03035;Name=CLI86_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03035 NSLJ01000005.1 Protein Homology CDS 106092 106799 . - 0 ID=cds-PDP44641.1;Parent=gene-CLI86_03035;Dbxref=NCBI_GP:PDP44641.1;Name=PDP44641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225991.1;locus_tag=CLI86_03035;product=phosphatase PAP2 family protein;protein_id=PDP44641.1;transl_table=11 NSLJ01000005.1 Genbank gene 106806 107570 . - . ID=gene-CLI86_03040;Name=CLI86_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03040 NSLJ01000005.1 Protein Homology CDS 106806 107570 . - 0 ID=cds-PDP44661.1;Parent=gene-CLI86_03040;Dbxref=NCBI_GP:PDP44661.1;Name=PDP44661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225992.1;locus_tag=CLI86_03040;product=hypothetical protein;protein_id=PDP44661.1;transl_table=11 NSLJ01000005.1 Genbank gene 107570 109399 . - . ID=gene-CLI86_03045;Name=CLI86_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03045 NSLJ01000005.1 Protein Homology CDS 107570 109399 . - 0 ID=cds-PDP44642.1;Parent=gene-CLI86_03045;Dbxref=NCBI_GP:PDP44642.1;Name=PDP44642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857231.1;locus_tag=CLI86_03045;product=protein BatD;protein_id=PDP44642.1;transl_table=11 NSLJ01000005.1 Genbank gene 109411 110151 . - . ID=gene-CLI86_03050;Name=CLI86_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03050 NSLJ01000005.1 Protein Homology CDS 109411 110151 . - 0 ID=cds-PDP44643.1;Parent=gene-CLI86_03050;Dbxref=NCBI_GP:PDP44643.1;Name=PDP44643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225994.1;locus_tag=CLI86_03050;product=hypothetical protein;protein_id=PDP44643.1;transl_table=11 NSLJ01000005.1 Genbank gene 110162 111181 . - . ID=gene-CLI86_03055;Name=CLI86_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03055 NSLJ01000005.1 Protein Homology CDS 110162 111181 . - 0 ID=cds-PDP44644.1;Parent=gene-CLI86_03055;Dbxref=NCBI_GP:PDP44644.1;Name=PDP44644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225995.1;locus_tag=CLI86_03055;product=hypothetical protein;protein_id=PDP44644.1;transl_table=11 NSLJ01000005.1 Genbank gene 111197 112186 . - . ID=gene-CLI86_03060;Name=CLI86_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03060 NSLJ01000005.1 Protein Homology CDS 111197 112186 . - 0 ID=cds-PDP44645.1;Parent=gene-CLI86_03060;Dbxref=NCBI_GP:PDP44645.1;Name=PDP44645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007656551.1;locus_tag=CLI86_03060;product=VWA domain-containing protein;protein_id=PDP44645.1;transl_table=11 NSLJ01000005.1 Genbank pseudogene 112306 113151 . - . ID=gene-CLI86_03065;Name=CLI86_03065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_03065;pseudo=true NSLJ01000005.1 Protein Homology CDS 112306 113151 . - 0 ID=cds-CLI86_03065;Parent=gene-CLI86_03065;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779809.1;locus_tag=CLI86_03065;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000005.1 Genbank gene 113230 114099 . - . ID=gene-CLI86_03070;Name=CLI86_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03070 NSLJ01000005.1 Protein Homology CDS 113230 114099 . - 0 ID=cds-PDP44646.1;Parent=gene-CLI86_03070;Dbxref=NCBI_GP:PDP44646.1;Name=PDP44646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225998.1;locus_tag=CLI86_03070;product=DUF58 domain-containing protein;protein_id=PDP44646.1;transl_table=11 NSLJ01000005.1 Genbank gene 114129 115124 . - . ID=gene-CLI86_03075;Name=CLI86_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03075 NSLJ01000005.1 Protein Homology CDS 114129 115124 . - 0 ID=cds-PDP44647.1;Parent=gene-CLI86_03075;Dbxref=NCBI_GP:PDP44647.1;Name=PDP44647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008761573.1;locus_tag=CLI86_03075;product=ATPase;protein_id=PDP44647.1;transl_table=11 NSLJ01000005.1 Genbank gene 115278 116669 . - . ID=gene-CLI86_03080;Name=CLI86_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03080 NSLJ01000005.1 Protein Homology CDS 115278 116669 . - 0 ID=cds-PDP44648.1;Parent=gene-CLI86_03080;Dbxref=NCBI_GP:PDP44648.1;Name=PDP44648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00216.19;locus_tag=CLI86_03080;product=HU family DNA-binding protein;protein_id=PDP44648.1;transl_table=11 NSLJ01000005.1 Genbank gene 116662 116952 . - . ID=gene-CLI86_03085;Name=CLI86_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03085 NSLJ01000005.1 Protein Homology CDS 116662 116952 . - 0 ID=cds-PDP44649.1;Parent=gene-CLI86_03085;Dbxref=NCBI_GP:PDP44649.1;Name=PDP44649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226001.1;locus_tag=CLI86_03085;product=HU family DNA-binding protein;protein_id=PDP44649.1;transl_table=11 NSLJ01000005.1 Genbank gene 117033 118328 . - . ID=gene-CLI86_03090;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CLI86_03090 NSLJ01000005.1 Protein Homology CDS 117033 118328 . - 0 ID=cds-PDP44650.1;Parent=gene-CLI86_03090;Dbxref=NCBI_GP:PDP44650.1;Name=PDP44650.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226002.1;locus_tag=CLI86_03090;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=PDP44650.1;transl_table=11 NSLJ01000005.1 Genbank gene 118309 119280 . - . ID=gene-CLI86_03095;Name=CLI86_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03095 NSLJ01000005.1 Protein Homology CDS 118309 119280 . - 0 ID=cds-PDP44651.1;Parent=gene-CLI86_03095;Dbxref=NCBI_GP:PDP44651.1;Name=PDP44651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226003.1;locus_tag=CLI86_03095;product=signal recognition particle-docking protein FtsY;protein_id=PDP44651.1;transl_table=11 NSLJ01000005.1 Genbank gene 119633 120790 . + . ID=gene-CLI86_03100;Name=CLI86_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03100 NSLJ01000005.1 Protein Homology CDS 119633 120790 . + 0 ID=cds-PDP44652.1;Parent=gene-CLI86_03100;Dbxref=NCBI_GP:PDP44652.1;Name=PDP44652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226004.1;locus_tag=CLI86_03100;product=6-bladed beta-propeller;protein_id=PDP44652.1;transl_table=11 NSLJ01000005.1 Genbank gene 120879 121226 . - . ID=gene-CLI86_03105;Name=CLI86_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03105 NSLJ01000005.1 GeneMarkS+ CDS 120879 121226 . - 0 ID=cds-PDP44653.1;Parent=gene-CLI86_03105;Dbxref=NCBI_GP:PDP44653.1;Name=PDP44653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03105;product=hypothetical protein;protein_id=PDP44653.1;transl_table=11 NSLJ01000005.1 Genbank gene 121320 121895 . - . ID=gene-CLI86_03110;Name=CLI86_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03110 NSLJ01000005.1 GeneMarkS+ CDS 121320 121895 . - 0 ID=cds-PDP44654.1;Parent=gene-CLI86_03110;Dbxref=NCBI_GP:PDP44654.1;Name=PDP44654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03110;product=hypothetical protein;protein_id=PDP44654.1;transl_table=11 NSLJ01000005.1 Genbank gene 122134 123174 . + . ID=gene-CLI86_03115;Name=CLI86_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03115 NSLJ01000005.1 Protein Homology CDS 122134 123174 . + 0 ID=cds-PDP44655.1;Parent=gene-CLI86_03115;Dbxref=NCBI_GP:PDP44655.1;Name=PDP44655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226008.1;locus_tag=CLI86_03115;product=aminodeoxychorismate lyase;protein_id=PDP44655.1;transl_table=11 NSLJ01000005.1 Genbank gene 123246 124838 . + . ID=gene-CLI86_03120;Name=CLI86_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03120 NSLJ01000005.1 Protein Homology CDS 123246 124838 . + 0 ID=cds-PDP44656.1;Parent=gene-CLI86_03120;Dbxref=NCBI_GP:PDP44656.1;Name=PDP44656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226009.1;locus_tag=CLI86_03120;product=indolepyruvate ferredoxin oxidoreductase;protein_id=PDP44656.1;transl_table=11 NSLJ01000005.1 Genbank gene 124840 125418 . + . ID=gene-CLI86_03125;Name=CLI86_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03125 NSLJ01000005.1 Protein Homology CDS 124840 125418 . + 0 ID=cds-PDP44657.1;Parent=gene-CLI86_03125;Dbxref=NCBI_GP:PDP44657.1;Name=PDP44657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809342.1;locus_tag=CLI86_03125;product=indolepyruvate oxidoreductase;protein_id=PDP44657.1;transl_table=11 NSLJ01000005.1 Genbank gene 125597 126034 . - . ID=gene-CLI86_03130;Name=CLI86_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03130 NSLJ01000005.1 Protein Homology CDS 125597 126034 . - 0 ID=cds-PDP44662.1;Parent=gene-CLI86_03130;Dbxref=NCBI_GP:PDP44662.1;Name=PDP44662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856911.1;locus_tag=CLI86_03130;product=XRE family transcriptional regulator;protein_id=PDP44662.1;transl_table=11 ##sequence-region NSLJ01000060.1 1 6732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000060.1 Genbank region 1 6732 . + . ID=NSLJ01000060.1:1..6732;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000060.1 Genbank pseudogene 236 628 . + . ID=gene-CLI86_13380;Name=CLI86_13380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13380;pseudo=true NSLJ01000060.1 Protein Homology CDS 236 628 . + 0 ID=cds-CLI86_13380;Parent=gene-CLI86_13380;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004354628.1;locus_tag=CLI86_13380;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLJ01000060.1 Genbank gene 824 1975 . - . ID=gene-CLI86_13385;Name=CLI86_13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13385 NSLJ01000060.1 Protein Homology CDS 824 1975 . - 0 ID=cds-PDP41736.1;Parent=gene-CLI86_13385;Dbxref=NCBI_GP:PDP41736.1;Name=PDP41736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_13385;product=6-bladed beta-propeller;protein_id=PDP41736.1;transl_table=11 NSLJ01000060.1 Genbank gene 2045 3313 . - . ID=gene-CLI86_13390;Name=CLI86_13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13390 NSLJ01000060.1 Protein Homology CDS 2045 3313 . - 0 ID=cds-PDP41737.1;Parent=gene-CLI86_13390;Dbxref=NCBI_GP:PDP41737.1;Name=PDP41737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04150;locus_tag=CLI86_13390;product=hypothetical protein;protein_id=PDP41737.1;transl_table=11 NSLJ01000060.1 Genbank gene 3294 3635 . - . ID=gene-CLI86_13395;Name=CLI86_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13395 NSLJ01000060.1 GeneMarkS+ CDS 3294 3635 . - 0 ID=cds-PDP41738.1;Parent=gene-CLI86_13395;Dbxref=NCBI_GP:PDP41738.1;Name=PDP41738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13395;product=hypothetical protein;protein_id=PDP41738.1;transl_table=11 NSLJ01000060.1 Genbank gene 3712 4803 . - . ID=gene-CLI86_13400;Name=CLI86_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13400 NSLJ01000060.1 Protein Homology CDS 3712 4803 . - 0 ID=cds-PDP41739.1;Parent=gene-CLI86_13400;Dbxref=NCBI_GP:PDP41739.1;Name=PDP41739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04148;locus_tag=CLI86_13400;product=radical SAM peptide maturase;protein_id=PDP41739.1;transl_table=11 NSLJ01000060.1 Genbank gene 4800 6158 . - . ID=gene-CLI86_13405;Name=CLI86_13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13405 NSLJ01000060.1 GeneMarkS+ CDS 4800 6158 . - 0 ID=cds-PDP41740.1;Parent=gene-CLI86_13405;Dbxref=NCBI_GP:PDP41740.1;Name=PDP41740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13405;product=hypothetical protein;protein_id=PDP41740.1;transl_table=11 NSLJ01000060.1 Genbank gene 6244 6498 . - . ID=gene-CLI86_13410;Name=CLI86_13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13410 NSLJ01000060.1 Protein Homology CDS 6244 6498 . - 0 ID=cds-PDP41741.1;Parent=gene-CLI86_13410;Dbxref=NCBI_GP:PDP41741.1;Name=PDP41741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04149;locus_tag=CLI86_13410;product=rSAM-modified peptide;protein_id=PDP41741.1;transl_table=11 ##sequence-region NSLJ01000061.1 1 6587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000061.1 Genbank region 1 6587 . + . ID=NSLJ01000061.1:1..6587;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000061.1 Genbank gene 23 421 . - . ID=gene-CLI86_13415;Name=CLI86_13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13415 NSLJ01000061.1 Protein Homology CDS 23 421 . - 0 ID=cds-PDP41657.1;Parent=gene-CLI86_13415;Dbxref=NCBI_GP:PDP41657.1;Name=PDP41657.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14294.4;locus_tag=CLI86_13415;product=hypothetical protein;protein_id=PDP41657.1;transl_table=11 NSLJ01000061.1 Genbank gene 527 892 . - . ID=gene-CLI86_13420;Name=CLI86_13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13420 NSLJ01000061.1 GeneMarkS+ CDS 527 892 . - 0 ID=cds-PDP41658.1;Parent=gene-CLI86_13420;Dbxref=NCBI_GP:PDP41658.1;Name=PDP41658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13420;product=hypothetical protein;protein_id=PDP41658.1;transl_table=11 NSLJ01000061.1 Genbank gene 911 2548 . - . ID=gene-CLI86_13425;Name=CLI86_13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13425 NSLJ01000061.1 GeneMarkS+ CDS 911 2548 . - 0 ID=cds-PDP41659.1;Parent=gene-CLI86_13425;Dbxref=NCBI_GP:PDP41659.1;Name=PDP41659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13425;product=hypothetical protein;protein_id=PDP41659.1;transl_table=11 NSLJ01000061.1 cmsearch riboswitch 2668 2878 . - . ID=id-NSLJ01000061.1:2668..2878;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000061.1 Genbank gene 3236 3496 . - . ID=gene-CLI86_13430;Name=CLI86_13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13430 NSLJ01000061.1 GeneMarkS+ CDS 3236 3496 . - 0 ID=cds-PDP41660.1;Parent=gene-CLI86_13430;Dbxref=NCBI_GP:PDP41660.1;Name=PDP41660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13430;product=hypothetical protein;protein_id=PDP41660.1;transl_table=11 NSLJ01000061.1 Genbank gene 4073 4525 . - . ID=gene-CLI86_13435;Name=CLI86_13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13435 NSLJ01000061.1 GeneMarkS+ CDS 4073 4525 . - 0 ID=cds-PDP41661.1;Parent=gene-CLI86_13435;Dbxref=NCBI_GP:PDP41661.1;Name=PDP41661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13435;product=hypothetical protein;protein_id=PDP41661.1;transl_table=11 NSLJ01000061.1 Genbank gene 4675 6087 . - . ID=gene-CLI86_13440;Name=CLI86_13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13440 NSLJ01000061.1 Protein Homology CDS 4675 6087 . - 0 ID=cds-PDP41662.1;Parent=gene-CLI86_13440;Dbxref=NCBI_GP:PDP41662.1;Name=PDP41662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01640.15;locus_tag=CLI86_13440;product=hypothetical protein;protein_id=PDP41662.1;transl_table=11 ##sequence-region NSLJ01000062.1 1 6549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000062.1 Genbank region 1 6549 . + . ID=NSLJ01000062.1:1..6549;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000062.1 Genbank gene 179 2266 . + . ID=gene-CLI86_13445;Name=dndD;gbkey=Gene;gene=dndD;gene_biotype=protein_coding;locus_tag=CLI86_13445 NSLJ01000062.1 Protein Homology CDS 179 2266 . + 0 ID=cds-PDP41579.1;Parent=gene-CLI86_13445;Dbxref=NCBI_GP:PDP41579.1;Name=PDP41579.1;gbkey=CDS;gene=dndD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004335934.1;locus_tag=CLI86_13445;product=DNA sulfur modification protein DndD;protein_id=PDP41579.1;transl_table=11 NSLJ01000062.1 Genbank gene 2268 3851 . + . ID=gene-CLI86_13450;Name=CLI86_13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13450 NSLJ01000062.1 Protein Homology CDS 2268 3851 . + 0 ID=cds-PDP41580.1;Parent=gene-CLI86_13450;Dbxref=NCBI_GP:PDP41580.1;Name=PDP41580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004335936.1;locus_tag=CLI86_13450;product=DUF1832 domain-containing protein;protein_id=PDP41580.1;transl_table=11 NSLJ01000062.1 Genbank gene 3858 4343 . + . ID=gene-CLI86_13455;Name=CLI86_13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13455 NSLJ01000062.1 GeneMarkS+ CDS 3858 4343 . + 0 ID=cds-PDP41581.1;Parent=gene-CLI86_13455;Dbxref=NCBI_GP:PDP41581.1;Name=PDP41581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13455;product=hypothetical protein;protein_id=PDP41581.1;transl_table=11 NSLJ01000062.1 Genbank gene 4300 5124 . + . ID=gene-CLI86_13460;Name=CLI86_13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13460 NSLJ01000062.1 Protein Homology CDS 4300 5124 . + 0 ID=cds-PDP41582.1;Parent=gene-CLI86_13460;Dbxref=NCBI_GP:PDP41582.1;Name=PDP41582.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03187;locus_tag=CLI86_13460;product=hypothetical protein;protein_id=PDP41582.1;transl_table=11 NSLJ01000062.1 Genbank gene 5093 5602 . + . ID=gene-CLI86_13465;Name=CLI86_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13465 NSLJ01000062.1 GeneMarkS+ CDS 5093 5602 . + 0 ID=cds-PDP41583.1;Parent=gene-CLI86_13465;Dbxref=NCBI_GP:PDP41583.1;Name=PDP41583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13465;product=hypothetical protein;protein_id=PDP41583.1;transl_table=11 NSLJ01000062.1 Genbank gene 5617 6402 . + . ID=gene-CLI86_13470;Name=CLI86_13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13470 NSLJ01000062.1 Protein Homology CDS 5617 6402 . + 0 ID=cds-PDP41584.1;Parent=gene-CLI86_13470;Dbxref=NCBI_GP:PDP41584.1;Name=PDP41584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015532022.1;locus_tag=CLI86_13470;product=restriction endonuclease;protein_id=PDP41584.1;transl_table=11 ##sequence-region NSLJ01000063.1 1 5971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000063.1 Genbank region 1 5971 . + . ID=NSLJ01000063.1:1..5971;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000063.1 Genbank gene 113 376 . + . ID=gene-CLI86_13475;Name=CLI86_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13475 NSLJ01000063.1 Protein Homology CDS 113 376 . + 0 ID=cds-PDP41574.1;Parent=gene-CLI86_13475;Dbxref=NCBI_GP:PDP41574.1;Name=PDP41574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541473.1;locus_tag=CLI86_13475;product=hypothetical protein;protein_id=PDP41574.1;transl_table=11 NSLJ01000063.1 Genbank gene 477 1514 . + . ID=gene-CLI86_13480;Name=CLI86_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13480 NSLJ01000063.1 Protein Homology CDS 477 1514 . + 0 ID=cds-PDP41571.1;Parent=gene-CLI86_13480;Dbxref=NCBI_GP:PDP41571.1;Name=PDP41571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223807.1;locus_tag=CLI86_13480;product=6-bladed beta-propeller;protein_id=PDP41571.1;transl_table=11 NSLJ01000063.1 Genbank gene 1654 2472 . + . ID=gene-CLI86_13485;Name=CLI86_13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13485 NSLJ01000063.1 Protein Homology CDS 1654 2472 . + 0 ID=cds-PDP41575.1;Parent=gene-CLI86_13485;Dbxref=NCBI_GP:PDP41575.1;Name=PDP41575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223808.1;locus_tag=CLI86_13485;product=hypothetical protein;protein_id=PDP41575.1;transl_table=11 NSLJ01000063.1 Genbank gene 2469 3356 . + . ID=gene-CLI86_13490;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_13490 NSLJ01000063.1 Protein Homology CDS 2469 3356 . + 0 ID=cds-PDP41572.1;Parent=gene-CLI86_13490;Dbxref=NCBI_GP:PDP41572.1;Name=PDP41572.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223809.1;locus_tag=CLI86_13490;product=signal peptidase I;protein_id=PDP41572.1;transl_table=11 NSLJ01000063.1 Genbank gene 3587 3901 . + . ID=gene-CLI86_13495;Name=CLI86_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13495 NSLJ01000063.1 Protein Homology CDS 3587 3901 . + 0 ID=cds-PDP41576.1;Parent=gene-CLI86_13495;Dbxref=NCBI_GP:PDP41576.1;Name=PDP41576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541473.1;locus_tag=CLI86_13495;product=hypothetical protein;protein_id=PDP41576.1;transl_table=11 NSLJ01000063.1 Genbank gene 4095 5228 . + . ID=gene-CLI86_13500;Name=CLI86_13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13500 NSLJ01000063.1 Protein Homology CDS 4095 5228 . + 0 ID=cds-PDP41573.1;Parent=gene-CLI86_13500;Dbxref=NCBI_GP:PDP41573.1;Name=PDP41573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_13500;product=6-bladed beta-propeller;protein_id=PDP41573.1;transl_table=11 NSLJ01000063.1 Genbank gene 5356 5971 . - . ID=gene-CLI86_13505;Name=CLI86_13505;end_range=5971,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13505;partial=true NSLJ01000063.1 Protein Homology CDS 5356 5971 . - 1 ID=cds-PDP41577.1;Parent=gene-CLI86_13505;Dbxref=NCBI_GP:PDP41577.1;Name=PDP41577.1;end_range=5971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809044.1;locus_tag=CLI86_13505;partial=true;product=IS4 family transposase;protein_id=PDP41577.1;transl_table=11 ##sequence-region NSLJ01000064.1 1 5879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000064.1 Genbank region 1 5879 . + . ID=NSLJ01000064.1:1..5879;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000064.1 Genbank gene 445 1977 . + . ID=gene-CLI86_13510;Name=CLI86_13510;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI86_13510 NSLJ01000064.1 Genbank rRNA 445 1977 . + . ID=rna-CLI86_13510;Parent=gene-CLI86_13510;gbkey=rRNA;locus_tag=CLI86_13510;product=16S ribosomal RNA NSLJ01000064.1 Genbank exon 445 1977 . + . ID=exon-CLI86_13510-1;Parent=rna-CLI86_13510;gbkey=rRNA;locus_tag=CLI86_13510;product=16S ribosomal RNA NSLJ01000064.1 Genbank gene 2192 2265 . + . ID=gene-CLI86_13515;Name=CLI86_13515;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_13515 NSLJ01000064.1 tRNAscan-SE tRNA 2192 2265 . + . ID=rna-CLI86_13515;Parent=gene-CLI86_13515;anticodon=(pos:2226..2228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_13515;product=tRNA-Ile NSLJ01000064.1 tRNAscan-SE exon 2192 2265 . + . ID=exon-CLI86_13515-1;Parent=rna-CLI86_13515;anticodon=(pos:2226..2228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_13515;product=tRNA-Ile NSLJ01000064.1 Genbank gene 2348 2424 . + . ID=gene-CLI86_13520;Name=CLI86_13520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_13520 NSLJ01000064.1 tRNAscan-SE tRNA 2348 2424 . + . ID=rna-CLI86_13520;Parent=gene-CLI86_13520;anticodon=(pos:2382..2384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_13520;product=tRNA-Ala NSLJ01000064.1 tRNAscan-SE exon 2348 2424 . + . ID=exon-CLI86_13520-1;Parent=rna-CLI86_13520;anticodon=(pos:2382..2384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_13520;product=tRNA-Ala NSLJ01000064.1 Genbank gene 2698 5593 . + . ID=gene-CLI86_13525;Name=CLI86_13525;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI86_13525 NSLJ01000064.1 Genbank rRNA 2698 5593 . + . ID=rna-CLI86_13525;Parent=gene-CLI86_13525;gbkey=rRNA;locus_tag=CLI86_13525;product=23S ribosomal RNA NSLJ01000064.1 Genbank exon 2698 5593 . + . ID=exon-CLI86_13525-1;Parent=rna-CLI86_13525;gbkey=rRNA;locus_tag=CLI86_13525;product=23S ribosomal RNA NSLJ01000064.1 Genbank gene 5751 5861 . + . ID=gene-CLI86_13530;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI86_13530 NSLJ01000064.1 cmsearch rRNA 5751 5861 . + . ID=rna-CLI86_13530;Parent=gene-CLI86_13530;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_13530;product=5S ribosomal RNA NSLJ01000064.1 cmsearch exon 5751 5861 . + . ID=exon-CLI86_13530-1;Parent=rna-CLI86_13530;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI86_13530;product=5S ribosomal RNA ##sequence-region NSLJ01000065.1 1 5567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000065.1 Genbank region 1 5567 . + . ID=NSLJ01000065.1:1..5567;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000065.1 Genbank gene 180 1835 . + . ID=gene-CLI86_13535;Name=CLI86_13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13535 NSLJ01000065.1 Protein Homology CDS 180 1835 . + 0 ID=cds-PDP41507.1;Parent=gene-CLI86_13535;Dbxref=NCBI_GP:PDP41507.1;Name=PDP41507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226268.1;locus_tag=CLI86_13535;product=long-chain fatty acid--CoA ligase;protein_id=PDP41507.1;transl_table=11 NSLJ01000065.1 Genbank gene 1914 2600 . - . ID=gene-CLI86_13540;Name=CLI86_13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13540 NSLJ01000065.1 Protein Homology CDS 1914 2600 . - 0 ID=cds-PDP41508.1;Parent=gene-CLI86_13540;Dbxref=NCBI_GP:PDP41508.1;Name=PDP41508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226267.1;locus_tag=CLI86_13540;product=proton-conducting membrane transporter;protein_id=PDP41508.1;transl_table=11 NSLJ01000065.1 Genbank gene 2629 3324 . - . ID=gene-CLI86_13545;Name=CLI86_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13545 NSLJ01000065.1 GeneMarkS+ CDS 2629 3324 . - 0 ID=cds-PDP41509.1;Parent=gene-CLI86_13545;Dbxref=NCBI_GP:PDP41509.1;Name=PDP41509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13545;product=hypothetical protein;protein_id=PDP41509.1;transl_table=11 NSLJ01000065.1 Genbank gene 3433 4443 . - . ID=gene-CLI86_13550;Name=CLI86_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13550 NSLJ01000065.1 Protein Homology CDS 3433 4443 . - 0 ID=cds-PDP41510.1;Parent=gene-CLI86_13550;Dbxref=NCBI_GP:PDP41510.1;Name=PDP41510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226264.1;locus_tag=CLI86_13550;product=aminopeptidase;protein_id=PDP41510.1;transl_table=11 NSLJ01000065.1 Genbank gene 4450 4929 . - . ID=gene-CLI86_13555;Name=CLI86_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13555 NSLJ01000065.1 Protein Homology CDS 4450 4929 . - 0 ID=cds-PDP41511.1;Parent=gene-CLI86_13555;Dbxref=NCBI_GP:PDP41511.1;Name=PDP41511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226263.1;locus_tag=CLI86_13555;product=DUF454 domain-containing protein;protein_id=PDP41511.1;transl_table=11 NSLJ01000065.1 Genbank pseudogene 4904 5567 . - . ID=gene-CLI86_13560;Name=CLI86_13560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13560;pseudo=true NSLJ01000065.1 Protein Homology CDS 4904 5567 . - 2 ID=cds-CLI86_13560;Parent=gene-CLI86_13560;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_13560;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000066.1 1 5028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000066.1 Genbank region 1 5028 . + . ID=NSLJ01000066.1:1..5028;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000066.1 Genbank gene 1 440 . + . ID=gene-CLI86_13565;Name=CLI86_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13565;partial=true;start_range=.,1 NSLJ01000066.1 Protein Homology CDS 1 440 . + 2 ID=cds-PDP41448.1;Parent=gene-CLI86_13565;Dbxref=NCBI_GP:PDP41448.1;Name=PDP41448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225976.1;locus_tag=CLI86_13565;partial=true;product=hypothetical protein;protein_id=PDP41448.1;start_range=.,1;transl_table=11 NSLJ01000066.1 Genbank gene 493 4107 . + . ID=gene-CLI86_13570;Name=CLI86_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13570 NSLJ01000066.1 Protein Homology CDS 493 4107 . + 0 ID=cds-PDP41449.1;Parent=gene-CLI86_13570;Dbxref=NCBI_GP:PDP41449.1;Name=PDP41449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16;locus_tag=CLI86_13570;product=hypothetical protein;protein_id=PDP41449.1;transl_table=11 NSLJ01000066.1 Genbank gene 4628 5028 . + . ID=gene-CLI86_13575;Name=CLI86_13575;end_range=5028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13575;partial=true NSLJ01000066.1 Protein Homology CDS 4628 5028 . + 0 ID=cds-PDP41450.1;Parent=gene-CLI86_13575;Dbxref=NCBI_GP:PDP41450.1;Name=PDP41450.1;end_range=5028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225979.1;locus_tag=CLI86_13575;partial=true;product=hypothetical protein;protein_id=PDP41450.1;transl_table=11 ##sequence-region NSLJ01000067.1 1 4234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000067.1 Genbank region 1 4234 . + . ID=NSLJ01000067.1:1..4234;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000067.1 Genbank gene 127 3456 . + . ID=gene-CLI86_13580;Name=CLI86_13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13580 NSLJ01000067.1 Protein Homology CDS 127 3456 . + 0 ID=cds-PDP41446.1;Parent=gene-CLI86_13580;Dbxref=NCBI_GP:PDP41446.1;Name=PDP41446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16%2CHMM:PF13004.5%2CHMM:PF13306.4;locus_tag=CLI86_13580;product=hypothetical protein;protein_id=PDP41446.1;transl_table=11 ##sequence-region NSLJ01000068.1 1 3703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000068.1 Genbank region 1 3703 . + . ID=NSLJ01000068.1:1..3703;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000068.1 Genbank gene 172 534 . - . ID=gene-CLI86_13585;Name=CLI86_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13585 NSLJ01000068.1 Protein Homology CDS 172 534 . - 0 ID=cds-PDP41379.1;Parent=gene-CLI86_13585;Dbxref=NCBI_GP:PDP41379.1;Name=PDP41379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009228309.1;locus_tag=CLI86_13585;product=hypothetical protein;protein_id=PDP41379.1;transl_table=11 NSLJ01000068.1 Genbank gene 577 1092 . + . ID=gene-CLI86_13590;Name=CLI86_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13590 NSLJ01000068.1 GeneMarkS+ CDS 577 1092 . + 0 ID=cds-PDP41380.1;Parent=gene-CLI86_13590;Dbxref=NCBI_GP:PDP41380.1;Name=PDP41380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13590;product=hypothetical protein;protein_id=PDP41380.1;transl_table=11 NSLJ01000068.1 Genbank gene 1352 1999 . + . ID=gene-CLI86_13595;Name=CLI86_13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13595 NSLJ01000068.1 Protein Homology CDS 1352 1999 . + 0 ID=cds-PDP41381.1;Parent=gene-CLI86_13595;Dbxref=NCBI_GP:PDP41381.1;Name=PDP41381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135089.1;locus_tag=CLI86_13595;product=hypothetical protein;protein_id=PDP41381.1;transl_table=11 NSLJ01000068.1 Genbank pseudogene 2058 3554 . - . ID=gene-CLI86_13600;Name=CLI86_13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13600;pseudo=true NSLJ01000068.1 Protein Homology CDS 2058 3554 . - 0 ID=cds-CLI86_13600;Parent=gene-CLI86_13600;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368870.1;locus_tag=CLI86_13600;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 ##sequence-region NSLJ01000069.1 1 3428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000069.1 Genbank region 1 3428 . + . ID=NSLJ01000069.1:1..3428;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000069.1 Genbank pseudogene 352 856 . + . ID=gene-CLI86_13605;Name=CLI86_13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13605;pseudo=true NSLJ01000069.1 Protein Homology CDS 352 856 . + 0 ID=cds-CLI86_13605;Parent=gene-CLI86_13605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223580.1;locus_tag=CLI86_13605;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000069.1 Genbank gene 945 1643 . + . ID=gene-CLI86_13610;Name=CLI86_13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13610 NSLJ01000069.1 GeneMarkS+ CDS 945 1643 . + 0 ID=cds-PDP41375.1;Parent=gene-CLI86_13610;Dbxref=NCBI_GP:PDP41375.1;Name=PDP41375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13610;product=hypothetical protein;protein_id=PDP41375.1;transl_table=11 NSLJ01000069.1 Genbank gene 1640 2884 . + . ID=gene-CLI86_13615;Name=CLI86_13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13615 NSLJ01000069.1 Protein Homology CDS 1640 2884 . + 0 ID=cds-PDP41376.1;Parent=gene-CLI86_13615;Dbxref=NCBI_GP:PDP41376.1;Name=PDP41376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04157;locus_tag=CLI86_13615;product=hypothetical protein;protein_id=PDP41376.1;transl_table=11 NSLJ01000069.1 Genbank pseudogene 3019 3428 . - . ID=gene-CLI86_13620;Name=CLI86_13620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13620;pseudo=true NSLJ01000069.1 Protein Homology CDS 3019 3428 . - 1 ID=cds-CLI86_13620;Parent=gene-CLI86_13620;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_13620;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000006.1 1 123977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000006.1 Genbank region 1 123977 . + . ID=NSLJ01000006.1:1..123977;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000006.1 Genbank gene 1 224 . + . ID=gene-CLI86_03135;Name=CLI86_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03135;partial=true;start_range=.,1 NSLJ01000006.1 Protein Homology CDS 1 224 . + 2 ID=cds-PDP44453.1;Parent=gene-CLI86_03135;Dbxref=NCBI_GP:PDP44453.1;Name=PDP44453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224166.1;locus_tag=CLI86_03135;partial=true;product=hypothetical protein;protein_id=PDP44453.1;start_range=.,1;transl_table=11 NSLJ01000006.1 Genbank gene 373 1656 . - . ID=gene-CLI86_03140;Name=CLI86_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03140 NSLJ01000006.1 Protein Homology CDS 373 1656 . - 0 ID=cds-PDP44454.1;Parent=gene-CLI86_03140;Dbxref=NCBI_GP:PDP44454.1;Name=PDP44454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224935.1;locus_tag=CLI86_03140;product=amino acid permease;protein_id=PDP44454.1;transl_table=11 NSLJ01000006.1 Genbank gene 1667 2533 . - . ID=gene-CLI86_03145;Name=CLI86_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03145 NSLJ01000006.1 Protein Homology CDS 1667 2533 . - 0 ID=cds-PDP44538.1;Parent=gene-CLI86_03145;Dbxref=NCBI_GP:PDP44538.1;Name=PDP44538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224936.1;locus_tag=CLI86_03145;product=hypothetical protein;protein_id=PDP44538.1;transl_table=11 NSLJ01000006.1 Genbank gene 2575 4131 . - . ID=gene-CLI86_03150;Name=CLI86_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03150 NSLJ01000006.1 GeneMarkS+ CDS 2575 4131 . - 0 ID=cds-PDP44455.1;Parent=gene-CLI86_03150;Dbxref=NCBI_GP:PDP44455.1;Name=PDP44455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03150;product=hypothetical protein;protein_id=PDP44455.1;transl_table=11 NSLJ01000006.1 Genbank gene 4157 5392 . - . ID=gene-CLI86_03155;Name=CLI86_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03155 NSLJ01000006.1 Protein Homology CDS 4157 5392 . - 0 ID=cds-PDP44456.1;Parent=gene-CLI86_03155;Dbxref=NCBI_GP:PDP44456.1;Name=PDP44456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224938.1;locus_tag=CLI86_03155;product=DUF4876 domain-containing protein;protein_id=PDP44456.1;transl_table=11 NSLJ01000006.1 Genbank gene 5406 8264 . - . ID=gene-CLI86_03160;Name=CLI86_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03160 NSLJ01000006.1 Protein Homology CDS 5406 8264 . - 0 ID=cds-PDP44457.1;Parent=gene-CLI86_03160;Dbxref=NCBI_GP:PDP44457.1;Name=PDP44457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224939.1;locus_tag=CLI86_03160;product=TonB-dependent receptor;protein_id=PDP44457.1;transl_table=11 NSLJ01000006.1 Genbank gene 8536 9369 . + . ID=gene-CLI86_03165;Name=CLI86_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03165 NSLJ01000006.1 Protein Homology CDS 8536 9369 . + 0 ID=cds-PDP44458.1;Parent=gene-CLI86_03165;Dbxref=NCBI_GP:PDP44458.1;Name=PDP44458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154439.1;locus_tag=CLI86_03165;product=phospholipase;protein_id=PDP44458.1;transl_table=11 NSLJ01000006.1 Genbank gene 9378 11081 . + . ID=gene-CLI86_03170;Name=CLI86_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03170 NSLJ01000006.1 Protein Homology CDS 9378 11081 . + 0 ID=cds-PDP44459.1;Parent=gene-CLI86_03170;Dbxref=NCBI_GP:PDP44459.1;Name=PDP44459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224941.1;locus_tag=CLI86_03170;product=alpha-amylase;protein_id=PDP44459.1;transl_table=11 NSLJ01000006.1 Genbank gene 11183 12127 . + . ID=gene-CLI86_03175;Name=CLI86_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03175 NSLJ01000006.1 Protein Homology CDS 11183 12127 . + 0 ID=cds-PDP44460.1;Parent=gene-CLI86_03175;Dbxref=NCBI_GP:PDP44460.1;Name=PDP44460.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224942.1;locus_tag=CLI86_03175;product=ribose-phosphate pyrophosphokinase;protein_id=PDP44460.1;transl_table=11 NSLJ01000006.1 Genbank gene 12216 12557 . + . ID=gene-CLI86_03180;Name=CLI86_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03180 NSLJ01000006.1 Protein Homology CDS 12216 12557 . + 0 ID=cds-PDP44461.1;Parent=gene-CLI86_03180;Dbxref=NCBI_GP:PDP44461.1;Name=PDP44461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224943.1;locus_tag=CLI86_03180;product=cupin;protein_id=PDP44461.1;transl_table=11 NSLJ01000006.1 Genbank gene 12578 13642 . - . ID=gene-CLI86_03185;Name=CLI86_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03185 NSLJ01000006.1 Protein Homology CDS 12578 13642 . - 0 ID=cds-PDP44539.1;Parent=gene-CLI86_03185;Dbxref=NCBI_GP:PDP44539.1;Name=PDP44539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005650427.1;locus_tag=CLI86_03185;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=PDP44539.1;transl_table=11 NSLJ01000006.1 Genbank gene 14073 14690 . + . ID=gene-CLI86_03190;Name=CLI86_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03190 NSLJ01000006.1 Protein Homology CDS 14073 14690 . + 0 ID=cds-PDP44462.1;Parent=gene-CLI86_03190;Dbxref=NCBI_GP:PDP44462.1;Name=PDP44462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224945.1;locus_tag=CLI86_03190;product=TetR family transcriptional regulator;protein_id=PDP44462.1;transl_table=11 NSLJ01000006.1 Genbank gene 14902 17250 . + . ID=gene-CLI86_03195;Name=CLI86_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03195 NSLJ01000006.1 Protein Homology CDS 14902 17250 . + 0 ID=cds-PDP44463.1;Parent=gene-CLI86_03195;Dbxref=NCBI_GP:PDP44463.1;Name=PDP44463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366207.1;locus_tag=CLI86_03195;product=hypothetical protein;protein_id=PDP44463.1;transl_table=11 NSLJ01000006.1 Genbank gene 17350 19692 . + . ID=gene-CLI86_03200;Name=CLI86_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03200 NSLJ01000006.1 Protein Homology CDS 17350 19692 . + 0 ID=cds-PDP44464.1;Parent=gene-CLI86_03200;Dbxref=NCBI_GP:PDP44464.1;Name=PDP44464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224947.1;locus_tag=CLI86_03200;product=TonB-dependent receptor;protein_id=PDP44464.1;transl_table=11 NSLJ01000006.1 Genbank gene 19755 20969 . + . ID=gene-CLI86_03205;Name=CLI86_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03205 NSLJ01000006.1 Protein Homology CDS 19755 20969 . + 0 ID=cds-PDP44465.1;Parent=gene-CLI86_03205;Dbxref=NCBI_GP:PDP44465.1;Name=PDP44465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224948.1;locus_tag=CLI86_03205;product=hypothetical protein;protein_id=PDP44465.1;transl_table=11 NSLJ01000006.1 Genbank gene 21321 22052 . + . ID=gene-CLI86_03210;Name=CLI86_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03210 NSLJ01000006.1 Protein Homology CDS 21321 22052 . + 0 ID=cds-PDP44466.1;Parent=gene-CLI86_03210;Dbxref=NCBI_GP:PDP44466.1;Name=PDP44466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224950.1;locus_tag=CLI86_03210;product=hypothetical protein;protein_id=PDP44466.1;transl_table=11 NSLJ01000006.1 Genbank gene 22226 23671 . + . ID=gene-CLI86_03215;Name=CLI86_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03215 NSLJ01000006.1 Protein Homology CDS 22226 23671 . + 0 ID=cds-PDP44467.1;Parent=gene-CLI86_03215;Dbxref=NCBI_GP:PDP44467.1;Name=PDP44467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216856.1;locus_tag=CLI86_03215;product=dipeptidase;protein_id=PDP44467.1;transl_table=11 NSLJ01000006.1 Genbank gene 23921 24649 . + . ID=gene-CLI86_03220;Name=CLI86_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03220 NSLJ01000006.1 Protein Homology CDS 23921 24649 . + 0 ID=cds-PDP44468.1;Parent=gene-CLI86_03220;Dbxref=NCBI_GP:PDP44468.1;Name=PDP44468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216857.1;locus_tag=CLI86_03220;product=nitroreductase family protein;protein_id=PDP44468.1;transl_table=11 NSLJ01000006.1 Genbank gene 24689 25477 . + . ID=gene-CLI86_03225;Name=CLI86_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03225 NSLJ01000006.1 Protein Homology CDS 24689 25477 . + 0 ID=cds-PDP44469.1;Parent=gene-CLI86_03225;Dbxref=NCBI_GP:PDP44469.1;Name=PDP44469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216858.1;locus_tag=CLI86_03225;product=outer membrane lipoprotein-sorting protein;protein_id=PDP44469.1;transl_table=11 NSLJ01000006.1 Genbank gene 25574 26146 . + . ID=gene-CLI86_03230;Name=CLI86_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03230 NSLJ01000006.1 GeneMarkS+ CDS 25574 26146 . + 0 ID=cds-PDP44470.1;Parent=gene-CLI86_03230;Dbxref=NCBI_GP:PDP44470.1;Name=PDP44470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03230;product=transposase;protein_id=PDP44470.1;transl_table=11 NSLJ01000006.1 Genbank gene 26136 27380 . + . ID=gene-CLI86_03235;Name=CLI86_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03235 NSLJ01000006.1 Protein Homology CDS 26136 27380 . + 0 ID=cds-PDP44540.1;Parent=gene-CLI86_03235;Dbxref=NCBI_GP:PDP44540.1;Name=PDP44540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216860.1;locus_tag=CLI86_03235;product=hypothetical protein;protein_id=PDP44540.1;transl_table=11 NSLJ01000006.1 Genbank gene 27578 28216 . + . ID=gene-CLI86_03240;Name=CLI86_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03240 NSLJ01000006.1 Protein Homology CDS 27578 28216 . + 0 ID=cds-PDP44471.1;Parent=gene-CLI86_03240;Dbxref=NCBI_GP:PDP44471.1;Name=PDP44471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224957.1;locus_tag=CLI86_03240;product=hypothetical protein;protein_id=PDP44471.1;transl_table=11 NSLJ01000006.1 Genbank gene 28227 28790 . + . ID=gene-CLI86_03245;Name=CLI86_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03245 NSLJ01000006.1 Protein Homology CDS 28227 28790 . + 0 ID=cds-PDP44472.1;Parent=gene-CLI86_03245;Dbxref=NCBI_GP:PDP44472.1;Name=PDP44472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224958.1;locus_tag=CLI86_03245;product=hypothetical protein;protein_id=PDP44472.1;transl_table=11 NSLJ01000006.1 Genbank gene 28930 29109 . + . ID=gene-CLI86_03250;Name=CLI86_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03250 NSLJ01000006.1 Protein Homology CDS 28930 29109 . + 0 ID=cds-PDP44473.1;Parent=gene-CLI86_03250;Dbxref=NCBI_GP:PDP44473.1;Name=PDP44473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006254158.1;locus_tag=CLI86_03250;product=hypothetical protein;protein_id=PDP44473.1;transl_table=11 NSLJ01000006.1 Genbank gene 29128 31473 . + . ID=gene-CLI86_03255;Name=CLI86_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03255 NSLJ01000006.1 Protein Homology CDS 29128 31473 . + 0 ID=cds-PDP44474.1;Parent=gene-CLI86_03255;Dbxref=NCBI_GP:PDP44474.1;Name=PDP44474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224959.1;locus_tag=CLI86_03255;product=TonB-dependent receptor;protein_id=PDP44474.1;transl_table=11 NSLJ01000006.1 Genbank gene 31470 32753 . + . ID=gene-CLI86_03260;Name=CLI86_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03260 NSLJ01000006.1 GeneMarkS+ CDS 31470 32753 . + 0 ID=cds-PDP44475.1;Parent=gene-CLI86_03260;Dbxref=NCBI_GP:PDP44475.1;Name=PDP44475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03260;product=hypothetical protein;protein_id=PDP44475.1;transl_table=11 NSLJ01000006.1 Genbank gene 32873 33694 . + . ID=gene-CLI86_03265;Name=CLI86_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03265 NSLJ01000006.1 Protein Homology CDS 32873 33694 . + 0 ID=cds-PDP44476.1;Parent=gene-CLI86_03265;Dbxref=NCBI_GP:PDP44476.1;Name=PDP44476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224961.1;locus_tag=CLI86_03265;product=zinc transporter ZupT;protein_id=PDP44476.1;transl_table=11 NSLJ01000006.1 Genbank gene 33812 34387 . + . ID=gene-CLI86_03270;Name=CLI86_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03270 NSLJ01000006.1 Protein Homology CDS 33812 34387 . + 0 ID=cds-PDP44541.1;Parent=gene-CLI86_03270;Dbxref=NCBI_GP:PDP44541.1;Name=PDP44541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224962.1;locus_tag=CLI86_03270;product=SRPBCC family protein;protein_id=PDP44541.1;transl_table=11 NSLJ01000006.1 Genbank gene 34421 35209 . + . ID=gene-CLI86_03275;Name=CLI86_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03275 NSLJ01000006.1 Protein Homology CDS 34421 35209 . + 0 ID=cds-PDP44542.1;Parent=gene-CLI86_03275;Dbxref=NCBI_GP:PDP44542.1;Name=PDP44542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341819.1;locus_tag=CLI86_03275;product=SAM-dependent methyltransferase;protein_id=PDP44542.1;transl_table=11 NSLJ01000006.1 Genbank gene 35225 35845 . + . ID=gene-CLI86_03280;Name=CLI86_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03280 NSLJ01000006.1 Protein Homology CDS 35225 35845 . + 0 ID=cds-PDP44477.1;Parent=gene-CLI86_03280;Dbxref=NCBI_GP:PDP44477.1;Name=PDP44477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224964.1;locus_tag=CLI86_03280;product=SAM-dependent methyltransferase;protein_id=PDP44477.1;transl_table=11 NSLJ01000006.1 Genbank gene 35925 36578 . + . ID=gene-CLI86_03285;Name=CLI86_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03285 NSLJ01000006.1 Protein Homology CDS 35925 36578 . + 0 ID=cds-PDP44478.1;Parent=gene-CLI86_03285;Dbxref=NCBI_GP:PDP44478.1;Name=PDP44478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216831.1;locus_tag=CLI86_03285;product=ubiquinone biosynthesis methyltransferase UbiE;protein_id=PDP44478.1;transl_table=11 NSLJ01000006.1 Genbank gene 36657 37472 . + . ID=gene-CLI86_03290;Name=CLI86_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03290 NSLJ01000006.1 Protein Homology CDS 36657 37472 . + 0 ID=cds-PDP44479.1;Parent=gene-CLI86_03290;Dbxref=NCBI_GP:PDP44479.1;Name=PDP44479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216832.1;locus_tag=CLI86_03290;product=DNA-binding protein;protein_id=PDP44479.1;transl_table=11 NSLJ01000006.1 Genbank gene 37590 38336 . + . ID=gene-CLI86_03295;Name=CLI86_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03295 NSLJ01000006.1 Protein Homology CDS 37590 38336 . + 0 ID=cds-PDP44543.1;Parent=gene-CLI86_03295;Dbxref=NCBI_GP:PDP44543.1;Name=PDP44543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003503898.1;locus_tag=CLI86_03295;product=SAM-dependent methyltransferase;protein_id=PDP44543.1;transl_table=11 NSLJ01000006.1 Genbank gene 38386 38958 . + . ID=gene-CLI86_03300;Name=CLI86_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03300 NSLJ01000006.1 Protein Homology CDS 38386 38958 . + 0 ID=cds-PDP44544.1;Parent=gene-CLI86_03300;Dbxref=NCBI_GP:PDP44544.1;Name=PDP44544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216834.1;locus_tag=CLI86_03300;product=hypothetical protein;protein_id=PDP44544.1;transl_table=11 NSLJ01000006.1 Genbank gene 38955 39350 . + . ID=gene-CLI86_03305;Name=CLI86_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03305 NSLJ01000006.1 Protein Homology CDS 38955 39350 . + 0 ID=cds-PDP44480.1;Parent=gene-CLI86_03305;Dbxref=NCBI_GP:PDP44480.1;Name=PDP44480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224969.1;locus_tag=CLI86_03305;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=PDP44480.1;transl_table=11 NSLJ01000006.1 Genbank pseudogene 39353 39666 . + . ID=gene-CLI86_03310;Name=CLI86_03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_03310;pseudo=true NSLJ01000006.1 Protein Homology CDS 39353 39666 . + 0 ID=cds-CLI86_03310;Parent=gene-CLI86_03310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009216837.1;locus_tag=CLI86_03310;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000006.1 Genbank gene 39672 41423 . + . ID=gene-CLI86_03315;Name=CLI86_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03315 NSLJ01000006.1 Protein Homology CDS 39672 41423 . + 0 ID=cds-PDP44481.1;Parent=gene-CLI86_03315;Dbxref=NCBI_GP:PDP44481.1;Name=PDP44481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224970.1;locus_tag=CLI86_03315;product=ABC transporter ATP-binding protein;protein_id=PDP44481.1;transl_table=11 NSLJ01000006.1 Genbank gene 41500 41865 . - . ID=gene-CLI86_03320;Name=CLI86_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03320 NSLJ01000006.1 Protein Homology CDS 41500 41865 . - 0 ID=cds-PDP44482.1;Parent=gene-CLI86_03320;Dbxref=NCBI_GP:PDP44482.1;Name=PDP44482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224971.1;locus_tag=CLI86_03320;product=four helix bundle protein;protein_id=PDP44482.1;transl_table=11 NSLJ01000006.1 Genbank gene 41953 43683 . + . ID=gene-CLI86_03325;Name=CLI86_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03325 NSLJ01000006.1 Protein Homology CDS 41953 43683 . + 0 ID=cds-PDP44483.1;Parent=gene-CLI86_03325;Dbxref=NCBI_GP:PDP44483.1;Name=PDP44483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224972.1;locus_tag=CLI86_03325;product=ABC transporter ATP-binding protein;protein_id=PDP44483.1;transl_table=11 NSLJ01000006.1 Genbank gene 43755 44681 . + . ID=gene-CLI86_03330;Name=CLI86_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03330 NSLJ01000006.1 Protein Homology CDS 43755 44681 . + 0 ID=cds-PDP44484.1;Parent=gene-CLI86_03330;Dbxref=NCBI_GP:PDP44484.1;Name=PDP44484.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224973.1;locus_tag=CLI86_03330;product=glutaminase;protein_id=PDP44484.1;transl_table=11 NSLJ01000006.1 Genbank gene 44803 45537 . + . ID=gene-CLI86_03335;Name=CLI86_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03335 NSLJ01000006.1 GeneMarkS+ CDS 44803 45537 . + 0 ID=cds-PDP44485.1;Parent=gene-CLI86_03335;Dbxref=NCBI_GP:PDP44485.1;Name=PDP44485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03335;product=hypothetical protein;protein_id=PDP44485.1;transl_table=11 NSLJ01000006.1 Genbank gene 45644 46633 . + . ID=gene-CLI86_03340;Name=CLI86_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03340 NSLJ01000006.1 Protein Homology CDS 45644 46633 . + 0 ID=cds-PDP44486.1;Parent=gene-CLI86_03340;Dbxref=NCBI_GP:PDP44486.1;Name=PDP44486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224975.1;locus_tag=CLI86_03340;product=cation transporter;protein_id=PDP44486.1;transl_table=11 NSLJ01000006.1 Genbank gene 46762 46980 . - . ID=gene-CLI86_03345;Name=CLI86_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03345 NSLJ01000006.1 Protein Homology CDS 46762 46980 . - 0 ID=cds-PDP44487.1;Parent=gene-CLI86_03345;Dbxref=NCBI_GP:PDP44487.1;Name=PDP44487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224999.1;locus_tag=CLI86_03345;product=hypothetical protein;protein_id=PDP44487.1;transl_table=11 NSLJ01000006.1 Genbank gene 47386 48321 . + . ID=gene-CLI86_03350;Name=CLI86_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03350 NSLJ01000006.1 Protein Homology CDS 47386 48321 . + 0 ID=cds-PDP44488.1;Parent=gene-CLI86_03350;Dbxref=NCBI_GP:PDP44488.1;Name=PDP44488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156246.1;locus_tag=CLI86_03350;product=riboflavin biosynthesis protein RibF;protein_id=PDP44488.1;transl_table=11 NSLJ01000006.1 Genbank gene 48343 49416 . + . ID=gene-CLI86_03355;Name=CLI86_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03355 NSLJ01000006.1 Protein Homology CDS 48343 49416 . + 0 ID=cds-PDP44489.1;Parent=gene-CLI86_03355;Dbxref=NCBI_GP:PDP44489.1;Name=PDP44489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224978.1;locus_tag=CLI86_03355;product=acetylornithine deacetylase;protein_id=PDP44489.1;transl_table=11 NSLJ01000006.1 Genbank gene 49410 50660 . + . ID=gene-CLI86_03360;Name=CLI86_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03360 NSLJ01000006.1 Protein Homology CDS 49410 50660 . + 0 ID=cds-PDP44490.1;Parent=gene-CLI86_03360;Dbxref=NCBI_GP:PDP44490.1;Name=PDP44490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224979.1;locus_tag=CLI86_03360;product=polysaccharide biosynthesis protein;protein_id=PDP44490.1;transl_table=11 NSLJ01000006.1 Genbank gene 50721 51341 . - . ID=gene-CLI86_03365;Name=CLI86_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03365 NSLJ01000006.1 Protein Homology CDS 50721 51341 . - 0 ID=cds-PDP44545.1;Parent=gene-CLI86_03365;Dbxref=NCBI_GP:PDP44545.1;Name=PDP44545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224980.1;locus_tag=CLI86_03365;product=thiamine diphosphokinase;protein_id=PDP44545.1;transl_table=11 NSLJ01000006.1 Genbank gene 51483 52595 . + . ID=gene-CLI86_03370;Name=CLI86_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03370 NSLJ01000006.1 GeneMarkS+ CDS 51483 52595 . + 0 ID=cds-PDP44491.1;Parent=gene-CLI86_03370;Dbxref=NCBI_GP:PDP44491.1;Name=PDP44491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03370;product=hypothetical protein;protein_id=PDP44491.1;transl_table=11 NSLJ01000006.1 Genbank gene 52664 54286 . + . ID=gene-CLI86_03375;Name=CLI86_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03375 NSLJ01000006.1 Protein Homology CDS 52664 54286 . + 0 ID=cds-PDP44492.1;Parent=gene-CLI86_03375;Dbxref=NCBI_GP:PDP44492.1;Name=PDP44492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02368.16;locus_tag=CLI86_03375;product=hypothetical protein;protein_id=PDP44492.1;transl_table=11 NSLJ01000006.1 Genbank gene 54459 55694 . - . ID=gene-CLI86_03380;Name=CLI86_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03380 NSLJ01000006.1 Protein Homology CDS 54459 55694 . - 0 ID=cds-PDP44493.1;Parent=gene-CLI86_03380;Dbxref=NCBI_GP:PDP44493.1;Name=PDP44493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224983.1;locus_tag=CLI86_03380;product=anaerobic sulfatase maturase;protein_id=PDP44493.1;transl_table=11 NSLJ01000006.1 Genbank gene 55937 56626 . + . ID=gene-CLI86_03385;Name=CLI86_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03385 NSLJ01000006.1 Protein Homology CDS 55937 56626 . + 0 ID=cds-PDP44494.1;Parent=gene-CLI86_03385;Dbxref=NCBI_GP:PDP44494.1;Name=PDP44494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275010.1;locus_tag=CLI86_03385;product=succinate dehydrogenase/fumarate reductase cytochrome b subunit;protein_id=PDP44494.1;transl_table=11 NSLJ01000006.1 Genbank gene 56668 58608 . + . ID=gene-CLI86_03390;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CLI86_03390 NSLJ01000006.1 Protein Homology CDS 56668 58608 . + 0 ID=cds-PDP44495.1;Parent=gene-CLI86_03390;Dbxref=NCBI_GP:PDP44495.1;Name=PDP44495.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467428.1;locus_tag=CLI86_03390;product=succinate dehydrogenase flavoprotein subunit;protein_id=PDP44495.1;transl_table=11 NSLJ01000006.1 Genbank gene 58640 59395 . + . ID=gene-CLI86_03395;Name=CLI86_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03395 NSLJ01000006.1 Protein Homology CDS 58640 59395 . + 0 ID=cds-PDP44496.1;Parent=gene-CLI86_03395;Dbxref=NCBI_GP:PDP44496.1;Name=PDP44496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467429.1;locus_tag=CLI86_03395;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=PDP44496.1;transl_table=11 NSLJ01000006.1 Genbank pseudogene 59843 60045 . - . ID=gene-CLI86_03400;Name=CLI86_03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_03400;pseudo=true NSLJ01000006.1 Protein Homology CDS 59843 60045 . - 0 ID=cds-CLI86_03400;Parent=gene-CLI86_03400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225242.1;locus_tag=CLI86_03400;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000006.1 Genbank gene 60357 62147 . + . ID=gene-CLI86_03405;Name=CLI86_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03405 NSLJ01000006.1 Protein Homology CDS 60357 62147 . + 0 ID=cds-PDP44497.1;Parent=gene-CLI86_03405;Dbxref=NCBI_GP:PDP44497.1;Name=PDP44497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224988.1;locus_tag=CLI86_03405;product=arginine--tRNA ligase;protein_id=PDP44497.1;transl_table=11 NSLJ01000006.1 Genbank gene 62206 64548 . - . ID=gene-CLI86_03410;Name=CLI86_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03410 NSLJ01000006.1 Protein Homology CDS 62206 64548 . - 0 ID=cds-PDP44546.1;Parent=gene-CLI86_03410;Dbxref=NCBI_GP:PDP44546.1;Name=PDP44546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154288.1;locus_tag=CLI86_03410;product=DNA topoisomerase I;protein_id=PDP44546.1;transl_table=11 NSLJ01000006.1 Genbank gene 64741 67410 . + . ID=gene-CLI86_03415;Name=CLI86_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03415 NSLJ01000006.1 Protein Homology CDS 64741 67410 . + 0 ID=cds-PDP44498.1;Parent=gene-CLI86_03415;Dbxref=NCBI_GP:PDP44498.1;Name=PDP44498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224991.1;locus_tag=CLI86_03415;product=valine--tRNA ligase;protein_id=PDP44498.1;transl_table=11 NSLJ01000006.1 Genbank gene 67472 68461 . + . ID=gene-CLI86_03420;Name=CLI86_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03420 NSLJ01000006.1 GeneMarkS+ CDS 67472 68461 . + 0 ID=cds-PDP44499.1;Parent=gene-CLI86_03420;Dbxref=NCBI_GP:PDP44499.1;Name=PDP44499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03420;product=hypothetical protein;protein_id=PDP44499.1;transl_table=11 NSLJ01000006.1 Genbank gene 68913 69320 . + . ID=gene-CLI86_03425;Name=CLI86_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03425 NSLJ01000006.1 GeneMarkS+ CDS 68913 69320 . + 0 ID=cds-PDP44500.1;Parent=gene-CLI86_03425;Dbxref=NCBI_GP:PDP44500.1;Name=PDP44500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03425;product=hypothetical protein;protein_id=PDP44500.1;transl_table=11 NSLJ01000006.1 Genbank gene 69396 69471 . + . ID=gene-CLI86_03430;Name=CLI86_03430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_03430 NSLJ01000006.1 tRNAscan-SE tRNA 69396 69471 . + . ID=rna-CLI86_03430;Parent=gene-CLI86_03430;anticodon=(pos:69429..69431);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03430;product=tRNA-Thr NSLJ01000006.1 tRNAscan-SE exon 69396 69471 . + . ID=exon-CLI86_03430-1;Parent=rna-CLI86_03430;anticodon=(pos:69429..69431);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03430;product=tRNA-Thr NSLJ01000006.1 Genbank gene 69857 73396 . + . ID=gene-CLI86_03435;Name=CLI86_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03435 NSLJ01000006.1 GeneMarkS+ CDS 69857 73396 . + 0 ID=cds-PDP44501.1;Parent=gene-CLI86_03435;Dbxref=NCBI_GP:PDP44501.1;Name=PDP44501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03435;product=hypothetical protein;protein_id=PDP44501.1;transl_table=11 NSLJ01000006.1 Genbank gene 73545 77588 . + . ID=gene-CLI86_03440;Name=CLI86_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03440 NSLJ01000006.1 GeneMarkS+ CDS 73545 77588 . + 0 ID=cds-PDP44502.1;Parent=gene-CLI86_03440;Dbxref=NCBI_GP:PDP44502.1;Name=PDP44502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03440;product=hypothetical protein;protein_id=PDP44502.1;transl_table=11 NSLJ01000006.1 Genbank gene 78157 78525 . - . ID=gene-CLI86_03445;Name=CLI86_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03445 NSLJ01000006.1 Protein Homology CDS 78157 78525 . - 0 ID=cds-PDP44503.1;Parent=gene-CLI86_03445;Dbxref=NCBI_GP:PDP44503.1;Name=PDP44503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224999.1;locus_tag=CLI86_03445;product=hypothetical protein;protein_id=PDP44503.1;transl_table=11 NSLJ01000006.1 Genbank gene 78655 78837 . - . ID=gene-CLI86_03450;Name=CLI86_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03450 NSLJ01000006.1 Protein Homology CDS 78655 78837 . - 0 ID=cds-PDP44504.1;Parent=gene-CLI86_03450;Dbxref=NCBI_GP:PDP44504.1;Name=PDP44504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224999.1;locus_tag=CLI86_03450;product=hypothetical protein;protein_id=PDP44504.1;transl_table=11 NSLJ01000006.1 Genbank gene 78850 79746 . + . ID=gene-CLI86_03455;Name=CLI86_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03455 NSLJ01000006.1 Protein Homology CDS 78850 79746 . + 0 ID=cds-PDP44505.1;Parent=gene-CLI86_03455;Dbxref=NCBI_GP:PDP44505.1;Name=PDP44505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005940934.1;locus_tag=CLI86_03455;product=TIGR01212 family radical SAM protein;protein_id=PDP44505.1;transl_table=11 NSLJ01000006.1 Genbank gene 79797 81965 . + . ID=gene-CLI86_03460;Name=CLI86_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03460 NSLJ01000006.1 Protein Homology CDS 79797 81965 . + 0 ID=cds-PDP44506.1;Parent=gene-CLI86_03460;Dbxref=NCBI_GP:PDP44506.1;Name=PDP44506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225003.1;locus_tag=CLI86_03460;product=S9 family peptidase;protein_id=PDP44506.1;transl_table=11 NSLJ01000006.1 Genbank gene 81965 82816 . + . ID=gene-CLI86_03465;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CLI86_03465 NSLJ01000006.1 Protein Homology CDS 81965 82816 . + 0 ID=cds-PDP44507.1;Parent=gene-CLI86_03465;Dbxref=NCBI_GP:PDP44507.1;Name=PDP44507.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225004.1;locus_tag=CLI86_03465;product=lipoyl synthase;protein_id=PDP44507.1;transl_table=11 NSLJ01000006.1 Genbank gene 82866 84074 . + . ID=gene-CLI86_03470;Name=CLI86_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03470 NSLJ01000006.1 Protein Homology CDS 82866 84074 . + 0 ID=cds-PDP44508.1;Parent=gene-CLI86_03470;Dbxref=NCBI_GP:PDP44508.1;Name=PDP44508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225005.1;locus_tag=CLI86_03470;product=hypothetical protein;protein_id=PDP44508.1;transl_table=11 NSLJ01000006.1 Genbank gene 84052 84546 . - . ID=gene-CLI86_03475;Name=CLI86_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03475 NSLJ01000006.1 Protein Homology CDS 84052 84546 . - 0 ID=cds-PDP44509.1;Parent=gene-CLI86_03475;Dbxref=NCBI_GP:PDP44509.1;Name=PDP44509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149876.1;locus_tag=CLI86_03475;product=phosphodiesterase;protein_id=PDP44509.1;transl_table=11 NSLJ01000006.1 Genbank gene 84740 85420 . - . ID=gene-CLI86_03480;Name=CLI86_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03480 NSLJ01000006.1 Protein Homology CDS 84740 85420 . - 0 ID=cds-PDP44510.1;Parent=gene-CLI86_03480;Dbxref=NCBI_GP:PDP44510.1;Name=PDP44510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12873.5;locus_tag=CLI86_03480;product=DUF3825 domain-containing protein;protein_id=PDP44510.1;transl_table=11 NSLJ01000006.1 Genbank gene 85521 86603 . - . ID=gene-CLI86_03485;Name=CLI86_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03485 NSLJ01000006.1 Protein Homology CDS 85521 86603 . - 0 ID=cds-PDP44511.1;Parent=gene-CLI86_03485;Dbxref=NCBI_GP:PDP44511.1;Name=PDP44511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773510.1;locus_tag=CLI86_03485;product=hypothetical protein;protein_id=PDP44511.1;transl_table=11 NSLJ01000006.1 Genbank gene 86685 87878 . - . ID=gene-CLI86_03490;Name=CLI86_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03490 NSLJ01000006.1 Protein Homology CDS 86685 87878 . - 0 ID=cds-PDP44512.1;Parent=gene-CLI86_03490;Dbxref=NCBI_GP:PDP44512.1;Name=PDP44512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097878.1;locus_tag=CLI86_03490;product=pyridoxal phosphate-dependent aminotransferase;protein_id=PDP44512.1;transl_table=11 NSLJ01000006.1 Genbank gene 87912 89123 . - . ID=gene-CLI86_03495;Name=CLI86_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03495 NSLJ01000006.1 Protein Homology CDS 87912 89123 . - 0 ID=cds-PDP44513.1;Parent=gene-CLI86_03495;Dbxref=NCBI_GP:PDP44513.1;Name=PDP44513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005859476.1;locus_tag=CLI86_03495;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=PDP44513.1;transl_table=11 NSLJ01000006.1 Genbank gene 89101 90972 . - . ID=gene-CLI86_03500;Name=CLI86_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03500 NSLJ01000006.1 Protein Homology CDS 89101 90972 . - 0 ID=cds-PDP44547.1;Parent=gene-CLI86_03500;Dbxref=NCBI_GP:PDP44547.1;Name=PDP44547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801693.1;locus_tag=CLI86_03500;product=hypothetical protein;protein_id=PDP44547.1;transl_table=11 NSLJ01000006.1 Genbank gene 91072 91455 . - . ID=gene-CLI86_03505;Name=CLI86_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03505 NSLJ01000006.1 Protein Homology CDS 91072 91455 . - 0 ID=cds-PDP44548.1;Parent=gene-CLI86_03505;Dbxref=NCBI_GP:PDP44548.1;Name=PDP44548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867543.1;locus_tag=CLI86_03505;product=hypothetical protein;protein_id=PDP44548.1;transl_table=11 NSLJ01000006.1 Genbank gene 91726 92178 . + . ID=gene-CLI86_03510;Name=CLI86_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03510 NSLJ01000006.1 Protein Homology CDS 91726 92178 . + 0 ID=cds-PDP44549.1;Parent=gene-CLI86_03510;Dbxref=NCBI_GP:PDP44549.1;Name=PDP44549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225014.1;locus_tag=CLI86_03510;product=ribosome assembly cofactor RimP;protein_id=PDP44549.1;transl_table=11 NSLJ01000006.1 Genbank gene 92187 93572 . + . ID=gene-CLI86_03515;Name=CLI86_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03515 NSLJ01000006.1 Protein Homology CDS 92187 93572 . + 0 ID=cds-PDP44514.1;Parent=gene-CLI86_03515;Dbxref=NCBI_GP:PDP44514.1;Name=PDP44514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007216867.1;locus_tag=CLI86_03515;product=transcription termination/antitermination protein NusA;protein_id=PDP44514.1;transl_table=11 NSLJ01000006.1 Genbank gene 93601 96558 . + . ID=gene-CLI86_03520;Name=CLI86_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03520 NSLJ01000006.1 Protein Homology CDS 93601 96558 . + 0 ID=cds-PDP44550.1;Parent=gene-CLI86_03520;Dbxref=NCBI_GP:PDP44550.1;Name=PDP44550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009275402.1;locus_tag=CLI86_03520;product=translation initiation factor IF-2;protein_id=PDP44550.1;transl_table=11 NSLJ01000006.1 Genbank gene 96571 97065 . + . ID=gene-CLI86_03525;Name=CLI86_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03525 NSLJ01000006.1 Protein Homology CDS 96571 97065 . + 0 ID=cds-PDP44515.1;Parent=gene-CLI86_03525;Dbxref=NCBI_GP:PDP44515.1;Name=PDP44515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779221.1;locus_tag=CLI86_03525;product=CvpA family protein;protein_id=PDP44515.1;transl_table=11 NSLJ01000006.1 Genbank gene 97067 98524 . + . ID=gene-CLI86_03530;Name=CLI86_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03530 NSLJ01000006.1 Protein Homology CDS 97067 98524 . + 0 ID=cds-PDP44516.1;Parent=gene-CLI86_03530;Dbxref=NCBI_GP:PDP44516.1;Name=PDP44516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225018.1;locus_tag=CLI86_03530;product=Fe-S cluster assembly protein SufB;protein_id=PDP44516.1;transl_table=11 NSLJ01000006.1 Genbank gene 98629 99375 . + . ID=gene-CLI86_03535;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CLI86_03535 NSLJ01000006.1 Protein Homology CDS 98629 99375 . + 0 ID=cds-PDP44551.1;Parent=gene-CLI86_03535;Dbxref=NCBI_GP:PDP44551.1;Name=PDP44551.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812319.1;locus_tag=CLI86_03535;product=Fe-S cluster assembly ATPase SufC;protein_id=PDP44551.1;transl_table=11 NSLJ01000006.1 Genbank gene 99418 100761 . + . ID=gene-CLI86_03540;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CLI86_03540 NSLJ01000006.1 Protein Homology CDS 99418 100761 . + 0 ID=cds-PDP44517.1;Parent=gene-CLI86_03540;Dbxref=NCBI_GP:PDP44517.1;Name=PDP44517.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646951.1;locus_tag=CLI86_03540;product=Fe-S cluster assembly protein SufD;protein_id=PDP44517.1;transl_table=11 NSLJ01000006.1 Genbank gene 100811 101332 . + . ID=gene-CLI86_03545;Name=CLI86_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03545 NSLJ01000006.1 GeneMarkS+ CDS 100811 101332 . + 0 ID=cds-PDP44518.1;Parent=gene-CLI86_03545;Dbxref=NCBI_GP:PDP44518.1;Name=PDP44518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03545;product=hypothetical protein;protein_id=PDP44518.1;transl_table=11 NSLJ01000006.1 Genbank gene 101339 102358 . - . ID=gene-CLI86_03550;Name=CLI86_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03550 NSLJ01000006.1 Protein Homology CDS 101339 102358 . - 0 ID=cds-PDP44519.1;Parent=gene-CLI86_03550;Dbxref=NCBI_GP:PDP44519.1;Name=PDP44519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008144172.1;locus_tag=CLI86_03550;product=AI-2E family transporter;protein_id=PDP44519.1;transl_table=11 NSLJ01000006.1 Genbank gene 102418 103191 . - . ID=gene-CLI86_03555;Name=CLI86_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03555 NSLJ01000006.1 Protein Homology CDS 102418 103191 . - 0 ID=cds-PDP44520.1;Parent=gene-CLI86_03555;Dbxref=NCBI_GP:PDP44520.1;Name=PDP44520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147592.1;locus_tag=CLI86_03555;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=PDP44520.1;transl_table=11 NSLJ01000006.1 Genbank gene 103204 104274 . - . ID=gene-CLI86_03560;Name=CLI86_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03560 NSLJ01000006.1 Protein Homology CDS 103204 104274 . - 0 ID=cds-PDP44521.1;Parent=gene-CLI86_03560;Dbxref=NCBI_GP:PDP44521.1;Name=PDP44521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225024.1;locus_tag=CLI86_03560;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=PDP44521.1;transl_table=11 NSLJ01000006.1 Genbank gene 104309 105517 . - . ID=gene-CLI86_03565;Name=CLI86_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03565 NSLJ01000006.1 Protein Homology CDS 104309 105517 . - 0 ID=cds-PDP44522.1;Parent=gene-CLI86_03565;Dbxref=NCBI_GP:PDP44522.1;Name=PDP44522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005868247.1;locus_tag=CLI86_03565;product=aminotransferase;protein_id=PDP44522.1;transl_table=11 NSLJ01000006.1 Genbank gene 105492 106334 . - . ID=gene-CLI86_03570;Name=CLI86_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03570 NSLJ01000006.1 Protein Homology CDS 105492 106334 . - 0 ID=cds-PDP44523.1;Parent=gene-CLI86_03570;Dbxref=NCBI_GP:PDP44523.1;Name=PDP44523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225026.1;locus_tag=CLI86_03570;product=prephenate dehydratase;protein_id=PDP44523.1;transl_table=11 NSLJ01000006.1 Genbank gene 106638 107320 . + . ID=gene-CLI86_03575;Name=CLI86_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03575 NSLJ01000006.1 Protein Homology CDS 106638 106965 . + 0 ID=cds-PDP44524.1;Parent=gene-CLI86_03575;Dbxref=NCBI_GP:PDP44524.1;Name=PDP44524.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_03575;product=IS1 family transposase;protein_id=PDP44524.1;transl_table=11 NSLJ01000006.1 Protein Homology CDS 106965 107320 . + 2 ID=cds-PDP44524.1;Parent=gene-CLI86_03575;Dbxref=NCBI_GP:PDP44524.1;Name=PDP44524.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_03575;product=IS1 family transposase;protein_id=PDP44524.1;transl_table=11 NSLJ01000006.1 Genbank gene 107372 108127 . - . ID=gene-CLI86_03580;Name=CLI86_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03580 NSLJ01000006.1 Protein Homology CDS 107372 108127 . - 0 ID=cds-PDP44552.1;Parent=gene-CLI86_03580;Dbxref=NCBI_GP:PDP44552.1;Name=PDP44552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005679728.1;locus_tag=CLI86_03580;product=oxidoreductase;protein_id=PDP44552.1;transl_table=11 NSLJ01000006.1 Genbank gene 108298 108732 . - . ID=gene-CLI86_03585;Name=CLI86_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03585 NSLJ01000006.1 Protein Homology CDS 108298 108732 . - 0 ID=cds-PDP44525.1;Parent=gene-CLI86_03585;Dbxref=NCBI_GP:PDP44525.1;Name=PDP44525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225029.1;locus_tag=CLI86_03585;product=heat-shock protein;protein_id=PDP44525.1;transl_table=11 NSLJ01000006.1 Genbank gene 109109 109315 . - . ID=gene-CLI86_03590;Name=CLI86_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03590 NSLJ01000006.1 Protein Homology CDS 109109 109315 . - 0 ID=cds-PDP44526.1;Parent=gene-CLI86_03590;Dbxref=NCBI_GP:PDP44526.1;Name=PDP44526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004369572.1;locus_tag=CLI86_03590;product=hypothetical protein;protein_id=PDP44526.1;transl_table=11 NSLJ01000006.1 Genbank gene 109477 110679 . + . ID=gene-CLI86_03595;Name=CLI86_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03595 NSLJ01000006.1 Protein Homology CDS 109477 110679 . + 0 ID=cds-PDP44527.1;Parent=gene-CLI86_03595;Dbxref=NCBI_GP:PDP44527.1;Name=PDP44527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005867594.1;locus_tag=CLI86_03595;product=cysteine desulfurase;protein_id=PDP44527.1;transl_table=11 NSLJ01000006.1 Genbank gene 110796 112493 . + . ID=gene-CLI86_03600;Name=CLI86_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03600 NSLJ01000006.1 Protein Homology CDS 110796 112493 . + 0 ID=cds-PDP44528.1;Parent=gene-CLI86_03600;Dbxref=NCBI_GP:PDP44528.1;Name=PDP44528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225032.1;locus_tag=CLI86_03600;product=hypothetical protein;protein_id=PDP44528.1;transl_table=11 NSLJ01000006.1 Genbank gene 112683 113285 . + . ID=gene-CLI86_03605;Name=CLI86_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03605 NSLJ01000006.1 Protein Homology CDS 112683 113285 . + 0 ID=cds-PDP44529.1;Parent=gene-CLI86_03605;Dbxref=NCBI_GP:PDP44529.1;Name=PDP44529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225035.1;locus_tag=CLI86_03605;product=ribonuclease HII;protein_id=PDP44529.1;transl_table=11 NSLJ01000006.1 Genbank gene 113288 113716 . - . ID=gene-CLI86_03610;Name=CLI86_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03610 NSLJ01000006.1 Protein Homology CDS 113288 113716 . - 0 ID=cds-PDP44530.1;Parent=gene-CLI86_03610;Dbxref=NCBI_GP:PDP44530.1;Name=PDP44530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004291365.1;locus_tag=CLI86_03610;product=Fe-S metabolism protein SufE;protein_id=PDP44530.1;transl_table=11 NSLJ01000006.1 Genbank gene 113729 114730 . - . ID=gene-CLI86_03615;Name=CLI86_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03615 NSLJ01000006.1 Protein Homology CDS 113729 114730 . - 0 ID=cds-PDP44531.1;Parent=gene-CLI86_03615;Dbxref=NCBI_GP:PDP44531.1;Name=PDP44531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225037.1;locus_tag=CLI86_03615;product=glutamine cyclotransferase;protein_id=PDP44531.1;transl_table=11 NSLJ01000006.1 Genbank gene 114743 116524 . - . ID=gene-CLI86_03620;Name=CLI86_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03620 NSLJ01000006.1 Protein Homology CDS 114743 116524 . - 0 ID=cds-PDP44532.1;Parent=gene-CLI86_03620;Dbxref=NCBI_GP:PDP44532.1;Name=PDP44532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225038.1;locus_tag=CLI86_03620;product=fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase;protein_id=PDP44532.1;transl_table=11 NSLJ01000006.1 Genbank gene 116602 118560 . - . ID=gene-CLI86_03625;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CLI86_03625 NSLJ01000006.1 Protein Homology CDS 116602 118560 . - 0 ID=cds-PDP44533.1;Parent=gene-CLI86_03625;Dbxref=NCBI_GP:PDP44533.1;Name=PDP44533.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225039.1;locus_tag=CLI86_03625;product=DNA gyrase subunit B;protein_id=PDP44533.1;transl_table=11 NSLJ01000006.1 Genbank gene 118773 120959 . - . ID=gene-CLI86_03630;Name=CLI86_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03630 NSLJ01000006.1 Protein Homology CDS 118773 120959 . - 0 ID=cds-PDP44534.1;Parent=gene-CLI86_03630;Dbxref=NCBI_GP:PDP44534.1;Name=PDP44534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225041.1;locus_tag=CLI86_03630;product=ABC transporter ATP-binding protein;protein_id=PDP44534.1;transl_table=11 NSLJ01000006.1 Genbank gene 120964 122349 . - . ID=gene-CLI86_03635;Name=CLI86_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03635 NSLJ01000006.1 Protein Homology CDS 120964 122349 . - 0 ID=cds-PDP44535.1;Parent=gene-CLI86_03635;Dbxref=NCBI_GP:PDP44535.1;Name=PDP44535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225042.1;locus_tag=CLI86_03635;product=HlyD family secretion protein;protein_id=PDP44535.1;transl_table=11 NSLJ01000006.1 Genbank gene 122339 123013 . - . ID=gene-CLI86_03640;Name=CLI86_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03640 NSLJ01000006.1 Protein Homology CDS 122339 123013 . - 0 ID=cds-PDP44536.1;Parent=gene-CLI86_03640;Dbxref=NCBI_GP:PDP44536.1;Name=PDP44536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225043.1;locus_tag=CLI86_03640;product=glycosyl transferase;protein_id=PDP44536.1;transl_table=11 NSLJ01000006.1 Genbank gene 123003 123941 . - . ID=gene-CLI86_03645;Name=CLI86_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03645 NSLJ01000006.1 Protein Homology CDS 123003 123941 . - 0 ID=cds-PDP44537.1;Parent=gene-CLI86_03645;Dbxref=NCBI_GP:PDP44537.1;Name=PDP44537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225044.1;locus_tag=CLI86_03645;product=glycosyl transferase;protein_id=PDP44537.1;transl_table=11 ##sequence-region NSLJ01000070.1 1 3296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000070.1 Genbank region 1 3296 . + . ID=NSLJ01000070.1:1..3296;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000070.1 Genbank gene 1 962 . - . ID=gene-CLI86_13625;Name=CLI86_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13625;partial=true;start_range=.,1 NSLJ01000070.1 Protein Homology CDS 1 962 . - 0 ID=cds-PDP41326.1;Parent=gene-CLI86_13625;Dbxref=NCBI_GP:PDP41326.1;Name=PDP41326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799839.1;locus_tag=CLI86_13625;partial=true;product=mannose-6-phosphate isomerase;protein_id=PDP41326.1;start_range=.,1;transl_table=11 NSLJ01000070.1 Genbank gene 1053 3146 . - . ID=gene-CLI86_13630;Name=CLI86_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13630 NSLJ01000070.1 Protein Homology CDS 1053 3146 . - 0 ID=cds-PDP41325.1;Parent=gene-CLI86_13630;Dbxref=NCBI_GP:PDP41325.1;Name=PDP41325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224251.1;locus_tag=CLI86_13630;product=1%2C4-alpha-glucan-branching enzyme;protein_id=PDP41325.1;transl_table=11 ##sequence-region NSLJ01000071.1 1 3026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000071.1 Genbank region 1 3026 . + . ID=NSLJ01000071.1:1..3026;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000071.1 Genbank gene 1 187 . - . ID=gene-CLI86_13635;Name=CLI86_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13635;partial=true;start_range=.,1 NSLJ01000071.1 GeneMarkS+ CDS 1 187 . - 0 ID=cds-PDP41320.1;Parent=gene-CLI86_13635;Dbxref=NCBI_GP:PDP41320.1;Name=PDP41320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13635;partial=true;product=hypothetical protein;protein_id=PDP41320.1;start_range=.,1;transl_table=11 NSLJ01000071.1 Genbank gene 585 1268 . + . ID=gene-CLI86_13640;Name=CLI86_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13640 NSLJ01000071.1 GeneMarkS+ CDS 585 1268 . + 0 ID=cds-PDP41321.1;Parent=gene-CLI86_13640;Dbxref=NCBI_GP:PDP41321.1;Name=PDP41321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13640;product=hypothetical protein;protein_id=PDP41321.1;transl_table=11 NSLJ01000071.1 Genbank gene 1273 1635 . + . ID=gene-CLI86_13645;Name=CLI86_13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13645 NSLJ01000071.1 Protein Homology CDS 1273 1635 . + 0 ID=cds-PDP41322.1;Parent=gene-CLI86_13645;Dbxref=NCBI_GP:PDP41322.1;Name=PDP41322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224583.1;locus_tag=CLI86_13645;product=hypothetical protein;protein_id=PDP41322.1;transl_table=11 NSLJ01000071.1 Genbank gene 1649 2965 . + . ID=gene-CLI86_13650;Name=CLI86_13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13650 NSLJ01000071.1 Protein Homology CDS 1649 2965 . + 0 ID=cds-PDP41323.1;Parent=gene-CLI86_13650;Dbxref=NCBI_GP:PDP41323.1;Name=PDP41323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI86_13650;product=T9SS C-terminal target domain-containing protein;protein_id=PDP41323.1;transl_table=11 ##sequence-region NSLJ01000072.1 1 2820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000072.1 Genbank region 1 2820 . + . ID=NSLJ01000072.1:1..2820;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000072.1 Genbank gene 1 2065 . - . ID=gene-CLI86_13655;Name=CLI86_13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13655;partial=true;start_range=.,1 NSLJ01000072.1 Protein Homology CDS 1 2065 . - 0 ID=cds-PDP41275.1;Parent=gene-CLI86_13655;Dbxref=NCBI_GP:PDP41275.1;Name=PDP41275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01447.16%2CHMM:PF02868.13;locus_tag=CLI86_13655;partial=true;product=hypothetical protein;protein_id=PDP41275.1;start_range=.,1;transl_table=11 NSLJ01000072.1 Genbank gene 2071 2454 . - . ID=gene-CLI86_13660;Name=CLI86_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13660 NSLJ01000072.1 GeneMarkS+ CDS 2071 2454 . - 0 ID=cds-PDP41276.1;Parent=gene-CLI86_13660;Dbxref=NCBI_GP:PDP41276.1;Name=PDP41276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13660;product=hypothetical protein;protein_id=PDP41276.1;transl_table=11 ##sequence-region NSLJ01000073.1 1 2634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000073.1 Genbank region 1 2634 . + . ID=NSLJ01000073.1:1..2634;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000073.1 Genbank gene 195 1127 . + . ID=gene-CLI86_13665;Name=CLI86_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13665 NSLJ01000073.1 Protein Homology CDS 195 1127 . + 0 ID=cds-PDP41272.1;Parent=gene-CLI86_13665;Dbxref=NCBI_GP:PDP41272.1;Name=PDP41272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224522.1;locus_tag=CLI86_13665;product=ribonuclease;protein_id=PDP41272.1;transl_table=11 NSLJ01000073.1 Genbank gene 1729 2322 . + . ID=gene-CLI86_13670;Name=CLI86_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13670 NSLJ01000073.1 GeneMarkS+ CDS 1729 2322 . + 0 ID=cds-PDP41273.1;Parent=gene-CLI86_13670;Dbxref=NCBI_GP:PDP41273.1;Name=PDP41273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13670;product=hypothetical protein;protein_id=PDP41273.1;transl_table=11 ##sequence-region NSLJ01000074.1 1 2556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000074.1 Genbank region 1 2556 . + . ID=NSLJ01000074.1:1..2556;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000074.1 Genbank gene 584 2263 . - . ID=gene-CLI86_13675;Name=CLI86_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13675 NSLJ01000074.1 Protein Homology CDS 584 2263 . - 0 ID=cds-PDP41225.1;Parent=gene-CLI86_13675;Dbxref=NCBI_GP:PDP41225.1;Name=PDP41225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005940488.1;locus_tag=CLI86_13675;product=long-chain fatty acid--CoA ligase;protein_id=PDP41225.1;transl_table=11 ##sequence-region NSLJ01000075.1 1 2555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000075.1 Genbank region 1 2555 . + . ID=NSLJ01000075.1:1..2555;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000075.1 Genbank gene 1 167 . + . ID=gene-CLI86_13680;Name=CLI86_13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13680;partial=true;start_range=.,1 NSLJ01000075.1 Protein Homology CDS 1 167 . + 2 ID=cds-PDP41221.1;Parent=gene-CLI86_13680;Dbxref=NCBI_GP:PDP41221.1;Name=PDP41221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223559.1;locus_tag=CLI86_13680;partial=true;product=6-bladed beta-propeller;protein_id=PDP41221.1;start_range=.,1;transl_table=11 NSLJ01000075.1 Genbank gene 181 1677 . + . ID=gene-CLI86_13685;Name=CLI86_13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13685 NSLJ01000075.1 Protein Homology CDS 181 1677 . + 0 ID=cds-PDP41222.1;Parent=gene-CLI86_13685;Dbxref=NCBI_GP:PDP41222.1;Name=PDP41222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223560.1;locus_tag=CLI86_13685;product=radical SAM peptide maturase;protein_id=PDP41222.1;transl_table=11 NSLJ01000075.1 Genbank gene 1680 2555 . + . ID=gene-CLI86_13690;Name=CLI86_13690;end_range=2555,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13690;partial=true NSLJ01000075.1 GeneMarkS+ CDS 1680 2555 . + 0 ID=cds-PDP41223.1;Parent=gene-CLI86_13690;Dbxref=NCBI_GP:PDP41223.1;Name=PDP41223.1;end_range=2555,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13690;partial=true;product=hypothetical protein;protein_id=PDP41223.1;transl_table=11 ##sequence-region NSLJ01000076.1 1 2443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000076.1 Genbank region 1 2443 . + . ID=NSLJ01000076.1:1..2443;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000076.1 Genbank pseudogene 1 128 . + . ID=gene-CLI86_13695;Name=CLI86_13695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13695;pseudo=true NSLJ01000076.1 Protein Homology CDS 1 128 . + 2 ID=cds-CLI86_13695;Parent=gene-CLI86_13695;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007765731.1;locus_tag=CLI86_13695;product=IS110 family transposase;pseudo=true;transl_table=11 NSLJ01000076.1 Genbank gene 185 940 . - . ID=gene-CLI86_13700;Name=CLI86_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13700 NSLJ01000076.1 Protein Homology CDS 185 940 . - 0 ID=cds-PDP41162.1;Parent=gene-CLI86_13700;Dbxref=NCBI_GP:PDP41162.1;Name=PDP41162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=CLI86_13700;product=hypothetical protein;protein_id=PDP41162.1;transl_table=11 NSLJ01000076.1 Genbank gene 945 1199 . - . ID=gene-CLI86_13705;Name=CLI86_13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13705 NSLJ01000076.1 GeneMarkS+ CDS 945 1199 . - 0 ID=cds-PDP41163.1;Parent=gene-CLI86_13705;Dbxref=NCBI_GP:PDP41163.1;Name=PDP41163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13705;product=hypothetical protein;protein_id=PDP41163.1;transl_table=11 NSLJ01000076.1 Genbank pseudogene 1403 1513 . - . ID=gene-CLI86_13710;Name=CLI86_13710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13710;pseudo=true NSLJ01000076.1 Protein Homology CDS 1403 1513 . - 0 ID=cds-CLI86_13710;Parent=gene-CLI86_13710;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009417020.1;locus_tag=CLI86_13710;product=transposase;pseudo=true;transl_table=11 NSLJ01000076.1 Genbank gene 1579 1785 . + . ID=gene-CLI86_13715;Name=CLI86_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13715 NSLJ01000076.1 GeneMarkS+ CDS 1579 1785 . + 0 ID=cds-PDP41164.1;Parent=gene-CLI86_13715;Dbxref=NCBI_GP:PDP41164.1;Name=PDP41164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13715;product=hypothetical protein;protein_id=PDP41164.1;transl_table=11 NSLJ01000076.1 Genbank gene 1788 2144 . - . ID=gene-CLI86_13720;Name=CLI86_13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13720 NSLJ01000076.1 Protein Homology CDS 1788 2144 . - 0 ID=cds-PDP41165.1;Parent=gene-CLI86_13720;Dbxref=NCBI_GP:PDP41165.1;Name=PDP41165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10882.6;locus_tag=CLI86_13720;product=hypothetical protein;protein_id=PDP41165.1;transl_table=11 NSLJ01000076.1 Genbank gene 2217 2443 . - . ID=gene-CLI86_13725;Name=CLI86_13725;end_range=2443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13725;partial=true NSLJ01000076.1 GeneMarkS+ CDS 2217 2443 . - 2 ID=cds-PDP41166.1;Parent=gene-CLI86_13725;Dbxref=NCBI_GP:PDP41166.1;Name=PDP41166.1;end_range=2443,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13725;partial=true;product=hypothetical protein;protein_id=PDP41166.1;transl_table=11 ##sequence-region NSLJ01000077.1 1 2402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000077.1 Genbank region 1 2402 . + . ID=NSLJ01000077.1:1..2402;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000077.1 Genbank gene 1 545 . + . ID=gene-CLI86_13730;Name=CLI86_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13730;partial=true;start_range=.,1 NSLJ01000077.1 Protein Homology CDS 1 545 . + 2 ID=cds-PDP41118.1;Parent=gene-CLI86_13730;Dbxref=NCBI_GP:PDP41118.1;Name=PDP41118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224885.1;locus_tag=CLI86_13730;partial=true;product=ISL3 family transposase;protein_id=PDP41118.1;start_range=.,1;transl_table=11 NSLJ01000077.1 Genbank gene 586 810 . + . ID=gene-CLI86_13735;Name=CLI86_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13735 NSLJ01000077.1 Protein Homology CDS 586 810 . + 0 ID=cds-PDP41119.1;Parent=gene-CLI86_13735;Dbxref=NCBI_GP:PDP41119.1;Name=PDP41119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14055.4;locus_tag=CLI86_13735;product=hypothetical protein;protein_id=PDP41119.1;transl_table=11 NSLJ01000077.1 Genbank gene 815 2056 . + . ID=gene-CLI86_13740;Name=CLI86_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13740 NSLJ01000077.1 Protein Homology CDS 815 2056 . + 0 ID=cds-PDP41120.1;Parent=gene-CLI86_13740;Dbxref=NCBI_GP:PDP41120.1;Name=PDP41120.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_13740;product=hypothetical protein;protein_id=PDP41120.1;transl_table=11 NSLJ01000077.1 Genbank gene 2101 2402 . + . ID=gene-CLI86_13745;Name=CLI86_13745;end_range=2402,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13745;partial=true NSLJ01000077.1 Protein Homology CDS 2101 2402 . + 0 ID=cds-PDP41121.1;Parent=gene-CLI86_13745;Dbxref=NCBI_GP:PDP41121.1;Name=PDP41121.1;end_range=2402,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223817.1;locus_tag=CLI86_13745;partial=true;product=polymerase;protein_id=PDP41121.1;transl_table=11 ##sequence-region NSLJ01000078.1 1 2378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000078.1 Genbank region 1 2378 . + . ID=NSLJ01000078.1:1..2378;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000078.1 Genbank gene 74 2378 . - . ID=gene-CLI86_13750;Name=CLI86_13750;end_range=2378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13750;partial=true NSLJ01000078.1 Protein Homology CDS 74 2378 . - 1 ID=cds-PDP41079.1;Parent=gene-CLI86_13750;Dbxref=NCBI_GP:PDP41079.1;Name=PDP41079.1;end_range=2378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225399.1;locus_tag=CLI86_13750;partial=true;product=hypothetical protein;protein_id=PDP41079.1;transl_table=11 ##sequence-region NSLJ01000079.1 1 2027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000079.1 Genbank region 1 2027 . + . ID=NSLJ01000079.1:1..2027;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000079.1 Genbank pseudogene 506 1672 . + . ID=gene-CLI86_13755;Name=CLI86_13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13755;pseudo=true NSLJ01000079.1 Protein Homology CDS 506 1672 . + 0 ID=cds-CLI86_13755;Parent=gene-CLI86_13755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007564783.1;locus_tag=CLI86_13755;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000007.1 1 118304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000007.1 Genbank region 1 118304 . + . ID=NSLJ01000007.1:1..118304;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000007.1 Genbank gene 87 4286 . + . ID=gene-CLI86_03650;Name=CLI86_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03650 NSLJ01000007.1 GeneMarkS+ CDS 87 4286 . + 0 ID=cds-PDP44353.1;Parent=gene-CLI86_03650;Dbxref=NCBI_GP:PDP44353.1;Name=PDP44353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03650;product=hypothetical protein;protein_id=PDP44353.1;transl_table=11 NSLJ01000007.1 Genbank gene 4542 5192 . + . ID=gene-CLI86_03655;Name=CLI86_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03655 NSLJ01000007.1 Protein Homology CDS 4542 5192 . + 0 ID=cds-PDP44354.1;Parent=gene-CLI86_03655;Dbxref=NCBI_GP:PDP44354.1;Name=PDP44354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013612987.1;locus_tag=CLI86_03655;product=hypothetical protein;protein_id=PDP44354.1;transl_table=11 NSLJ01000007.1 Genbank gene 5189 5503 . + . ID=gene-CLI86_03660;Name=CLI86_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03660 NSLJ01000007.1 Protein Homology CDS 5189 5503 . + 0 ID=cds-PDP44355.1;Parent=gene-CLI86_03660;Dbxref=NCBI_GP:PDP44355.1;Name=PDP44355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225474.1;locus_tag=CLI86_03660;product=transcriptional regulator;protein_id=PDP44355.1;transl_table=11 NSLJ01000007.1 Genbank gene 5594 6994 . + . ID=gene-CLI86_03665;Name=CLI86_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03665 NSLJ01000007.1 Protein Homology CDS 5594 6994 . + 0 ID=cds-PDP44356.1;Parent=gene-CLI86_03665;Dbxref=NCBI_GP:PDP44356.1;Name=PDP44356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225473.1;locus_tag=CLI86_03665;product=cell envelope integrity protein CreD;protein_id=PDP44356.1;transl_table=11 NSLJ01000007.1 Genbank gene 7010 8473 . - . ID=gene-CLI86_03670;Name=CLI86_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03670 NSLJ01000007.1 Protein Homology CDS 7010 8473 . - 0 ID=cds-PDP44357.1;Parent=gene-CLI86_03670;Dbxref=NCBI_GP:PDP44357.1;Name=PDP44357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225472.1;locus_tag=CLI86_03670;product=sodium:solute symporter;protein_id=PDP44357.1;transl_table=11 NSLJ01000007.1 Genbank gene 8598 9359 . + . ID=gene-CLI86_03675;Name=CLI86_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03675 NSLJ01000007.1 Protein Homology CDS 8598 9359 . + 0 ID=cds-PDP44358.1;Parent=gene-CLI86_03675;Dbxref=NCBI_GP:PDP44358.1;Name=PDP44358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225471.1;locus_tag=CLI86_03675;product=hypothetical protein;protein_id=PDP44358.1;transl_table=11 NSLJ01000007.1 Genbank gene 9356 10306 . + . ID=gene-CLI86_03680;Name=CLI86_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03680 NSLJ01000007.1 Protein Homology CDS 9356 10306 . + 0 ID=cds-PDP44359.1;Parent=gene-CLI86_03680;Dbxref=NCBI_GP:PDP44359.1;Name=PDP44359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225470.1;locus_tag=CLI86_03680;product=glycosyltransferase;protein_id=PDP44359.1;transl_table=11 NSLJ01000007.1 Genbank gene 10308 11510 . - . ID=gene-CLI86_03685;Name=CLI86_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03685 NSLJ01000007.1 GeneMarkS+ CDS 10308 11510 . - 0 ID=cds-PDP44360.1;Parent=gene-CLI86_03685;Dbxref=NCBI_GP:PDP44360.1;Name=PDP44360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03685;product=hypothetical protein;protein_id=PDP44360.1;transl_table=11 NSLJ01000007.1 Genbank gene 11473 13848 . - . ID=gene-CLI86_03690;Name=CLI86_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03690 NSLJ01000007.1 Protein Homology CDS 11473 13848 . - 0 ID=cds-PDP44361.1;Parent=gene-CLI86_03690;Dbxref=NCBI_GP:PDP44361.1;Name=PDP44361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10101.7;locus_tag=CLI86_03690;product=hypothetical protein;protein_id=PDP44361.1;transl_table=11 NSLJ01000007.1 Genbank gene 14092 14475 . - . ID=gene-CLI86_03695;Name=CLI86_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03695 NSLJ01000007.1 Protein Homology CDS 14092 14475 . - 0 ID=cds-PDP44429.1;Parent=gene-CLI86_03695;Dbxref=NCBI_GP:PDP44429.1;Name=PDP44429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009746346.1;locus_tag=CLI86_03695;product=glyoxalase;protein_id=PDP44429.1;transl_table=11 NSLJ01000007.1 Genbank gene 14552 15208 . - . ID=gene-CLI86_03700;Name=CLI86_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03700 NSLJ01000007.1 Protein Homology CDS 14552 15208 . - 0 ID=cds-PDP44362.1;Parent=gene-CLI86_03700;Dbxref=NCBI_GP:PDP44362.1;Name=PDP44362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225466.1;locus_tag=CLI86_03700;product=hypothetical protein;protein_id=PDP44362.1;transl_table=11 NSLJ01000007.1 Genbank gene 15205 16296 . - . ID=gene-CLI86_03705;Name=CLI86_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03705 NSLJ01000007.1 Protein Homology CDS 15205 16296 . - 0 ID=cds-PDP44363.1;Parent=gene-CLI86_03705;Dbxref=NCBI_GP:PDP44363.1;Name=PDP44363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225465.1;locus_tag=CLI86_03705;product=ATPase;protein_id=PDP44363.1;transl_table=11 NSLJ01000007.1 Genbank gene 16529 17071 . + . ID=gene-CLI86_03710;Name=CLI86_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03710 NSLJ01000007.1 Protein Homology CDS 16529 17071 . + 0 ID=cds-PDP44364.1;Parent=gene-CLI86_03710;Dbxref=NCBI_GP:PDP44364.1;Name=PDP44364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225464.1;locus_tag=CLI86_03710;product=hypoxanthine phosphoribosyltransferase;protein_id=PDP44364.1;transl_table=11 NSLJ01000007.1 Genbank gene 17096 17674 . + . ID=gene-CLI86_03715;Name=CLI86_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03715 NSLJ01000007.1 Protein Homology CDS 17096 17674 . + 0 ID=cds-PDP44365.1;Parent=gene-CLI86_03715;Dbxref=NCBI_GP:PDP44365.1;Name=PDP44365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225463.1;locus_tag=CLI86_03715;product=adenylate kinase;protein_id=PDP44365.1;transl_table=11 NSLJ01000007.1 Genbank gene 17720 18871 . + . ID=gene-CLI86_03720;Name=CLI86_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03720 NSLJ01000007.1 Protein Homology CDS 17720 18871 . + 0 ID=cds-PDP44366.1;Parent=gene-CLI86_03720;Dbxref=NCBI_GP:PDP44366.1;Name=PDP44366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225462.1;locus_tag=CLI86_03720;product=GTPase ObgE;protein_id=PDP44366.1;transl_table=11 NSLJ01000007.1 Genbank gene 18996 19469 . + . ID=gene-CLI86_03725;Name=CLI86_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03725 NSLJ01000007.1 Protein Homology CDS 18996 19469 . + 0 ID=cds-PDP44367.1;Parent=gene-CLI86_03725;Dbxref=NCBI_GP:PDP44367.1;Name=PDP44367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225461.1;locus_tag=CLI86_03725;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=PDP44367.1;transl_table=11 NSLJ01000007.1 Genbank gene 19613 21364 . - . ID=gene-CLI86_03730;Name=CLI86_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03730 NSLJ01000007.1 Protein Homology CDS 19613 21364 . - 0 ID=cds-PDP44368.1;Parent=gene-CLI86_03730;Dbxref=NCBI_GP:PDP44368.1;Name=PDP44368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008780043.1;locus_tag=CLI86_03730;product=phosphoglucomutase;protein_id=PDP44368.1;transl_table=11 NSLJ01000007.1 Genbank gene 21576 23261 . - . ID=gene-CLI86_03735;Name=CLI86_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03735 NSLJ01000007.1 Protein Homology CDS 21576 23261 . - 0 ID=cds-PDP44369.1;Parent=gene-CLI86_03735;Dbxref=NCBI_GP:PDP44369.1;Name=PDP44369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225459.1;locus_tag=CLI86_03735;product=peptidase M23;protein_id=PDP44369.1;transl_table=11 NSLJ01000007.1 Genbank gene 23293 24312 . - . ID=gene-CLI86_03740;Name=CLI86_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03740 NSLJ01000007.1 Protein Homology CDS 23293 24312 . - 0 ID=cds-PDP44370.1;Parent=gene-CLI86_03740;Dbxref=NCBI_GP:PDP44370.1;Name=PDP44370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225458.1;locus_tag=CLI86_03740;product=endonuclease;protein_id=PDP44370.1;transl_table=11 NSLJ01000007.1 Genbank gene 24716 26062 . + . ID=gene-CLI86_03745;Name=CLI86_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03745 NSLJ01000007.1 Protein Homology CDS 24716 26062 . + 0 ID=cds-PDP44430.1;Parent=gene-CLI86_03745;Dbxref=NCBI_GP:PDP44430.1;Name=PDP44430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149665.1;locus_tag=CLI86_03745;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=PDP44430.1;transl_table=11 NSLJ01000007.1 Genbank gene 26233 27420 . + . ID=gene-CLI86_03750;Name=CLI86_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03750 NSLJ01000007.1 Protein Homology CDS 26233 27420 . + 0 ID=cds-PDP44371.1;Parent=gene-CLI86_03750;Dbxref=NCBI_GP:PDP44371.1;Name=PDP44371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007656844.1;locus_tag=CLI86_03750;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=PDP44371.1;transl_table=11 NSLJ01000007.1 Genbank gene 27417 28148 . + . ID=gene-CLI86_03755;Name=nqrC;gbkey=Gene;gene=nqrC;gene_biotype=protein_coding;locus_tag=CLI86_03755 NSLJ01000007.1 Protein Homology CDS 27417 28148 . + 0 ID=cds-PDP44372.1;Parent=gene-CLI86_03755;Dbxref=NCBI_GP:PDP44372.1;Name=PDP44372.1;gbkey=CDS;gene=nqrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225455.1;locus_tag=CLI86_03755;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit C;protein_id=PDP44372.1;transl_table=11 NSLJ01000007.1 Genbank gene 28152 28781 . + . ID=gene-CLI86_03760;Name=CLI86_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03760 NSLJ01000007.1 Protein Homology CDS 28152 28781 . + 0 ID=cds-PDP44373.1;Parent=gene-CLI86_03760;Dbxref=NCBI_GP:PDP44373.1;Name=PDP44373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225454.1;locus_tag=CLI86_03760;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=PDP44373.1;transl_table=11 NSLJ01000007.1 Genbank gene 28805 29422 . + . ID=gene-CLI86_03765;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=CLI86_03765 NSLJ01000007.1 Protein Homology CDS 28805 29422 . + 0 ID=cds-PDP44374.1;Parent=gene-CLI86_03765;Dbxref=NCBI_GP:PDP44374.1;Name=PDP44374.1;gbkey=CDS;gene=nqrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010664551.1;locus_tag=CLI86_03765;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=PDP44374.1;transl_table=11 NSLJ01000007.1 Genbank gene 29449 30735 . + . ID=gene-CLI86_03770;Name=CLI86_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03770 NSLJ01000007.1 Protein Homology CDS 29449 30735 . + 0 ID=cds-PDP44375.1;Parent=gene-CLI86_03770;Dbxref=NCBI_GP:PDP44375.1;Name=PDP44375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225452.1;locus_tag=CLI86_03770;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=PDP44375.1;transl_table=11 NSLJ01000007.1 Genbank gene 30890 32206 . - . ID=gene-CLI86_03775;Name=CLI86_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03775 NSLJ01000007.1 Protein Homology CDS 30890 32206 . - 0 ID=cds-PDP44376.1;Parent=gene-CLI86_03775;Dbxref=NCBI_GP:PDP44376.1;Name=PDP44376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225450.1;locus_tag=CLI86_03775;product=DUF1343 domain-containing protein;protein_id=PDP44376.1;transl_table=11 NSLJ01000007.1 Genbank gene 32197 32739 . + . ID=gene-CLI86_03780;Name=CLI86_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03780 NSLJ01000007.1 Protein Homology CDS 32197 32739 . + 0 ID=cds-PDP44431.1;Parent=gene-CLI86_03780;Dbxref=NCBI_GP:PDP44431.1;Name=PDP44431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858951.1;locus_tag=CLI86_03780;product=HD domain-containing protein;protein_id=PDP44431.1;transl_table=11 NSLJ01000007.1 Genbank gene 32798 35554 . + . ID=gene-CLI86_03785;Name=CLI86_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03785 NSLJ01000007.1 Protein Homology CDS 32798 35554 . + 0 ID=cds-PDP44377.1;Parent=gene-CLI86_03785;Dbxref=NCBI_GP:PDP44377.1;Name=PDP44377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225448.1;locus_tag=CLI86_03785;product=kinase;protein_id=PDP44377.1;transl_table=11 NSLJ01000007.1 Genbank gene 35555 36217 . - . ID=gene-CLI86_03790;Name=CLI86_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03790 NSLJ01000007.1 Protein Homology CDS 35555 36217 . - 0 ID=cds-PDP44432.1;Parent=gene-CLI86_03790;Dbxref=NCBI_GP:PDP44432.1;Name=PDP44432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152597.1;locus_tag=CLI86_03790;product=uracil-DNA glycosylase;protein_id=PDP44432.1;transl_table=11 NSLJ01000007.1 Genbank gene 36349 36422 . + . ID=gene-CLI86_03795;Name=CLI86_03795;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_03795 NSLJ01000007.1 tRNAscan-SE tRNA 36349 36422 . + . ID=rna-CLI86_03795;Parent=gene-CLI86_03795;anticodon=(pos:36383..36385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03795;product=tRNA-Arg NSLJ01000007.1 tRNAscan-SE exon 36349 36422 . + . ID=exon-CLI86_03795-1;Parent=rna-CLI86_03795;anticodon=(pos:36383..36385);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03795;product=tRNA-Arg NSLJ01000007.1 Genbank gene 36632 37249 . - . ID=gene-CLI86_03800;Name=CLI86_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03800 NSLJ01000007.1 Protein Homology CDS 36632 37249 . - 0 ID=cds-PDP44378.1;Parent=gene-CLI86_03800;Dbxref=NCBI_GP:PDP44378.1;Name=PDP44378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225446.1;locus_tag=CLI86_03800;product=restriction endonuclease;protein_id=PDP44378.1;transl_table=11 NSLJ01000007.1 Genbank gene 37252 38226 . - . ID=gene-CLI86_03805;Name=CLI86_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03805 NSLJ01000007.1 Protein Homology CDS 37252 38226 . - 0 ID=cds-PDP44379.1;Parent=gene-CLI86_03805;Dbxref=NCBI_GP:PDP44379.1;Name=PDP44379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225445.1;locus_tag=CLI86_03805;product=site-specific DNA-methyltransferase;protein_id=PDP44379.1;transl_table=11 NSLJ01000007.1 Genbank gene 38570 39100 . - . ID=gene-CLI86_03810;Name=CLI86_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03810 NSLJ01000007.1 Protein Homology CDS 38570 39100 . - 0 ID=cds-PDP44380.1;Parent=gene-CLI86_03810;Dbxref=NCBI_GP:PDP44380.1;Name=PDP44380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225443.1;locus_tag=CLI86_03810;product=GNAT family N-acetyltransferase;protein_id=PDP44380.1;transl_table=11 NSLJ01000007.1 Genbank gene 39119 40288 . - . ID=gene-CLI86_03815;Name=CLI86_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03815 NSLJ01000007.1 Protein Homology CDS 39119 40288 . - 0 ID=cds-PDP44381.1;Parent=gene-CLI86_03815;Dbxref=NCBI_GP:PDP44381.1;Name=PDP44381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010803328.1;locus_tag=CLI86_03815;product=glycosyltransferase family 2 protein;protein_id=PDP44381.1;transl_table=11 NSLJ01000007.1 Genbank gene 40293 40916 . - . ID=gene-CLI86_03820;Name=CLI86_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03820 NSLJ01000007.1 Protein Homology CDS 40293 40916 . - 0 ID=cds-PDP44433.1;Parent=gene-CLI86_03820;Dbxref=NCBI_GP:PDP44433.1;Name=PDP44433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006843080.1;locus_tag=CLI86_03820;product=recombination protein RecR;protein_id=PDP44433.1;transl_table=11 NSLJ01000007.1 Genbank gene 40921 42069 . - . ID=gene-CLI86_03825;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CLI86_03825 NSLJ01000007.1 Protein Homology CDS 40921 42069 . - 0 ID=cds-PDP44382.1;Parent=gene-CLI86_03825;Dbxref=NCBI_GP:PDP44382.1;Name=PDP44382.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225440.1;locus_tag=CLI86_03825;product=dTDP-glucose 4%2C6-dehydratase;protein_id=PDP44382.1;transl_table=11 NSLJ01000007.1 Genbank gene 42083 42640 . - . ID=gene-CLI86_03830;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CLI86_03830 NSLJ01000007.1 Protein Homology CDS 42083 42640 . - 0 ID=cds-PDP44434.1;Parent=gene-CLI86_03830;Dbxref=NCBI_GP:PDP44434.1;Name=PDP44434.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343464.1;locus_tag=CLI86_03830;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=PDP44434.1;transl_table=11 NSLJ01000007.1 Genbank gene 42768 42838 . + . ID=gene-CLI86_03835;Name=CLI86_03835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_03835 NSLJ01000007.1 tRNAscan-SE tRNA 42768 42838 . + . ID=rna-CLI86_03835;Parent=gene-CLI86_03835;anticodon=(pos:42800..42802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03835;product=tRNA-Cys NSLJ01000007.1 tRNAscan-SE exon 42768 42838 . + . ID=exon-CLI86_03835-1;Parent=rna-CLI86_03835;anticodon=(pos:42800..42802);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_03835;product=tRNA-Cys NSLJ01000007.1 Genbank gene 43064 44683 . + . ID=gene-CLI86_03840;Name=CLI86_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03840 NSLJ01000007.1 Protein Homology CDS 43064 44683 . + 0 ID=cds-PDP44383.1;Parent=gene-CLI86_03840;Dbxref=NCBI_GP:PDP44383.1;Name=PDP44383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225438.1;locus_tag=CLI86_03840;product=ABC-F family ATPase;protein_id=PDP44383.1;transl_table=11 NSLJ01000007.1 Genbank gene 44680 45894 . - . ID=gene-CLI86_03845;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CLI86_03845 NSLJ01000007.1 Protein Homology CDS 44680 45894 . - 0 ID=cds-PDP44435.1;Parent=gene-CLI86_03845;Dbxref=NCBI_GP:PDP44435.1;Name=PDP44435.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225437.1;locus_tag=CLI86_03845;product=nicotinate phosphoribosyltransferase;protein_id=PDP44435.1;transl_table=11 NSLJ01000007.1 Genbank gene 46029 47558 . - . ID=gene-CLI86_03850;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CLI86_03850 NSLJ01000007.1 Protein Homology CDS 46029 47558 . - 0 ID=cds-PDP44384.1;Parent=gene-CLI86_03850;Dbxref=NCBI_GP:PDP44384.1;Name=PDP44384.1;gbkey=CDS;gene=rny;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798620.1;locus_tag=CLI86_03850;product=ribonuclease Y;protein_id=PDP44384.1;transl_table=11 NSLJ01000007.1 Genbank gene 47672 47977 . - . ID=gene-CLI86_03855;Name=CLI86_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03855 NSLJ01000007.1 Protein Homology CDS 47672 47977 . - 0 ID=cds-PDP44385.1;Parent=gene-CLI86_03855;Dbxref=NCBI_GP:PDP44385.1;Name=PDP44385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155234.1;locus_tag=CLI86_03855;product=cell division protein ZapA;protein_id=PDP44385.1;transl_table=11 NSLJ01000007.1 Genbank gene 47980 48255 . - . ID=gene-CLI86_03860;Name=CLI86_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03860 NSLJ01000007.1 Protein Homology CDS 47980 48255 . - 0 ID=cds-PDP44436.1;Parent=gene-CLI86_03860;Dbxref=NCBI_GP:PDP44436.1;Name=PDP44436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864886.1;locus_tag=CLI86_03860;product=hypothetical protein;protein_id=PDP44436.1;transl_table=11 NSLJ01000007.1 Genbank gene 48392 48592 . - . ID=gene-CLI86_03865;Name=CLI86_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03865 NSLJ01000007.1 Protein Homology CDS 48392 48592 . - 0 ID=cds-PDP44386.1;Parent=gene-CLI86_03865;Dbxref=NCBI_GP:PDP44386.1;Name=PDP44386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225433.1;locus_tag=CLI86_03865;product=hypothetical protein;protein_id=PDP44386.1;transl_table=11 NSLJ01000007.1 Genbank gene 48780 50300 . - . ID=gene-CLI86_03870;Name=CLI86_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03870 NSLJ01000007.1 Protein Homology CDS 48780 50300 . - 0 ID=cds-PDP44387.1;Parent=gene-CLI86_03870;Dbxref=NCBI_GP:PDP44387.1;Name=PDP44387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005657963.1;locus_tag=CLI86_03870;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=PDP44387.1;transl_table=11 NSLJ01000007.1 Genbank gene 50470 51597 . + . ID=gene-CLI86_03875;Name=CLI86_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03875 NSLJ01000007.1 GeneMarkS+ CDS 50470 51597 . + 0 ID=cds-PDP44388.1;Parent=gene-CLI86_03875;Dbxref=NCBI_GP:PDP44388.1;Name=PDP44388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03875;product=hypothetical protein;protein_id=PDP44388.1;transl_table=11 NSLJ01000007.1 Genbank gene 51695 53956 . + . ID=gene-CLI86_03880;Name=CLI86_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03880 NSLJ01000007.1 Protein Homology CDS 51695 53956 . + 0 ID=cds-PDP44389.1;Parent=gene-CLI86_03880;Dbxref=NCBI_GP:PDP44389.1;Name=PDP44389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225429.1;locus_tag=CLI86_03880;product=sodium:proton antiporter;protein_id=PDP44389.1;transl_table=11 NSLJ01000007.1 Genbank gene 54172 58017 . + . ID=gene-CLI86_03885;Name=CLI86_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03885 NSLJ01000007.1 GeneMarkS+ CDS 54172 58017 . + 0 ID=cds-PDP44390.1;Parent=gene-CLI86_03885;Dbxref=NCBI_GP:PDP44390.1;Name=PDP44390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03885;product=hypothetical protein;protein_id=PDP44390.1;transl_table=11 NSLJ01000007.1 Genbank gene 58005 58733 . + . ID=gene-CLI86_03890;Name=CLI86_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03890 NSLJ01000007.1 GeneMarkS+ CDS 58005 58733 . + 0 ID=cds-PDP44391.1;Parent=gene-CLI86_03890;Dbxref=NCBI_GP:PDP44391.1;Name=PDP44391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03890;product=hypothetical protein;protein_id=PDP44391.1;transl_table=11 NSLJ01000007.1 Genbank gene 58778 61999 . + . ID=gene-CLI86_03895;Name=CLI86_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03895 NSLJ01000007.1 Protein Homology CDS 58778 61999 . + 0 ID=cds-PDP44392.1;Parent=gene-CLI86_03895;Dbxref=NCBI_GP:PDP44392.1;Name=PDP44392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009016854.1;locus_tag=CLI86_03895;product=carbamoyl phosphate synthase large subunit;protein_id=PDP44392.1;transl_table=11 NSLJ01000007.1 Genbank pseudogene 63463 64878 . + . ID=gene-CLI86_03900;Name=CLI86_03900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_03900;pseudo=true NSLJ01000007.1 Protein Homology CDS 63463 64878 . + 0 ID=cds-CLI86_03900;Parent=gene-CLI86_03900;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_03900;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000007.1 Genbank gene 64960 65642 . + . ID=gene-CLI86_03905;Name=CLI86_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03905 NSLJ01000007.1 Protein Homology CDS 64960 65287 . + 0 ID=cds-PDP44437.1;Parent=gene-CLI86_03905;Dbxref=NCBI_GP:PDP44437.1;Name=PDP44437.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_03905;product=IS1 family transposase;protein_id=PDP44437.1;transl_table=11 NSLJ01000007.1 Protein Homology CDS 65287 65642 . + 2 ID=cds-PDP44437.1;Parent=gene-CLI86_03905;Dbxref=NCBI_GP:PDP44437.1;Name=PDP44437.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_03905;product=IS1 family transposase;protein_id=PDP44437.1;transl_table=11 NSLJ01000007.1 Genbank gene 65633 67216 . + . ID=gene-CLI86_03910;Name=CLI86_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03910 NSLJ01000007.1 Protein Homology CDS 65633 67216 . + 0 ID=cds-PDP44393.1;Parent=gene-CLI86_03910;Dbxref=NCBI_GP:PDP44393.1;Name=PDP44393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017141257.1;locus_tag=CLI86_03910;product=SusD/RagB family nutrient-binding outer membrane lipoprotein;protein_id=PDP44393.1;transl_table=11 NSLJ01000007.1 Genbank pseudogene 67512 67604 . - . ID=gene-CLI86_03915;Name=CLI86_03915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_03915;pseudo=true NSLJ01000007.1 Protein Homology CDS 67512 67604 . - 0 ID=cds-CLI86_03915;Parent=gene-CLI86_03915;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019907754.1;locus_tag=CLI86_03915;product=secondary thiamine-phosphate synthase enzyme;pseudo=true;transl_table=11 NSLJ01000007.1 Genbank gene 67775 68089 . + . ID=gene-CLI86_03920;Name=CLI86_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03920 NSLJ01000007.1 Protein Homology CDS 67775 68089 . + 0 ID=cds-PDP44394.1;Parent=gene-CLI86_03920;Dbxref=NCBI_GP:PDP44394.1;Name=PDP44394.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14055.4;locus_tag=CLI86_03920;product=hypothetical protein;protein_id=PDP44394.1;transl_table=11 NSLJ01000007.1 Genbank gene 68089 68619 . + . ID=gene-CLI86_03925;Name=CLI86_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03925 NSLJ01000007.1 Protein Homology CDS 68089 68619 . + 0 ID=cds-PDP44395.1;Parent=gene-CLI86_03925;Dbxref=NCBI_GP:PDP44395.1;Name=PDP44395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_03925;product=hypothetical protein;protein_id=PDP44395.1;transl_table=11 NSLJ01000007.1 Genbank gene 68620 69555 . - . ID=gene-CLI86_03930;Name=CLI86_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03930 NSLJ01000007.1 Protein Homology CDS 68620 69555 . - 0 ID=cds-PDP44396.1;Parent=gene-CLI86_03930;Dbxref=NCBI_GP:PDP44396.1;Name=PDP44396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_074453637.1;locus_tag=CLI86_03930;product=IS1595 family transposase;protein_id=PDP44396.1;transl_table=11 NSLJ01000007.1 Genbank gene 69658 70164 . + . ID=gene-CLI86_03935;Name=CLI86_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03935 NSLJ01000007.1 GeneMarkS+ CDS 69658 70164 . + 0 ID=cds-PDP44397.1;Parent=gene-CLI86_03935;Dbxref=NCBI_GP:PDP44397.1;Name=PDP44397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03935;product=hypothetical protein;protein_id=PDP44397.1;transl_table=11 NSLJ01000007.1 Genbank gene 70234 70485 . + . ID=gene-CLI86_03940;Name=CLI86_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03940 NSLJ01000007.1 GeneMarkS+ CDS 70234 70485 . + 0 ID=cds-PDP44398.1;Parent=gene-CLI86_03940;Dbxref=NCBI_GP:PDP44398.1;Name=PDP44398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03940;product=hypothetical protein;protein_id=PDP44398.1;transl_table=11 NSLJ01000007.1 Genbank gene 70727 70963 . + . ID=gene-CLI86_03945;Name=CLI86_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03945 NSLJ01000007.1 Protein Homology CDS 70727 70963 . + 0 ID=cds-PDP44399.1;Parent=gene-CLI86_03945;Dbxref=NCBI_GP:PDP44399.1;Name=PDP44399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541471.1;locus_tag=CLI86_03945;product=hypothetical protein;protein_id=PDP44399.1;transl_table=11 NSLJ01000007.1 Genbank gene 71049 72167 . + . ID=gene-CLI86_03950;Name=CLI86_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03950 NSLJ01000007.1 Protein Homology CDS 71049 72167 . + 0 ID=cds-PDP44400.1;Parent=gene-CLI86_03950;Dbxref=NCBI_GP:PDP44400.1;Name=PDP44400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17170.2;locus_tag=CLI86_03950;product=6-bladed beta-propeller;protein_id=PDP44400.1;transl_table=11 NSLJ01000007.1 Genbank gene 72921 73337 . - . ID=gene-CLI86_03955;Name=CLI86_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03955 NSLJ01000007.1 Protein Homology CDS 72921 73337 . - 0 ID=cds-PDP44401.1;Parent=gene-CLI86_03955;Dbxref=NCBI_GP:PDP44401.1;Name=PDP44401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015853196.1;locus_tag=CLI86_03955;product=secondary thiamine-phosphate synthase enzyme;protein_id=PDP44401.1;transl_table=11 NSLJ01000007.1 Genbank gene 73377 74159 . - . ID=gene-CLI86_03960;Name=CLI86_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03960 NSLJ01000007.1 Protein Homology CDS 73377 74159 . - 0 ID=cds-PDP44402.1;Parent=gene-CLI86_03960;Dbxref=NCBI_GP:PDP44402.1;Name=PDP44402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008778938.1;locus_tag=CLI86_03960;product=radical SAM protein;protein_id=PDP44402.1;transl_table=11 NSLJ01000007.1 Genbank gene 74230 76299 . - . ID=gene-CLI86_03965;Name=CLI86_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03965 NSLJ01000007.1 Protein Homology CDS 74230 76299 . - 0 ID=cds-PDP44403.1;Parent=gene-CLI86_03965;Dbxref=NCBI_GP:PDP44403.1;Name=PDP44403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224432.1;locus_tag=CLI86_03965;product=hypothetical protein;protein_id=PDP44403.1;transl_table=11 NSLJ01000007.1 Genbank gene 76312 77121 . - . ID=gene-CLI86_03970;Name=CLI86_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03970 NSLJ01000007.1 GeneMarkS+ CDS 76312 77121 . - 0 ID=cds-PDP44404.1;Parent=gene-CLI86_03970;Dbxref=NCBI_GP:PDP44404.1;Name=PDP44404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03970;product=hypothetical protein;protein_id=PDP44404.1;transl_table=11 NSLJ01000007.1 Genbank gene 77326 78480 . - . ID=gene-CLI86_03975;Name=CLI86_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03975 NSLJ01000007.1 Protein Homology CDS 77326 78480 . - 0 ID=cds-PDP44405.1;Parent=gene-CLI86_03975;Dbxref=NCBI_GP:PDP44405.1;Name=PDP44405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224430.1;locus_tag=CLI86_03975;product=dipeptide epimerase;protein_id=PDP44405.1;transl_table=11 NSLJ01000007.1 Genbank gene 78477 79559 . - . ID=gene-CLI86_03980;Name=CLI86_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03980 NSLJ01000007.1 Protein Homology CDS 78477 79559 . - 0 ID=cds-PDP44406.1;Parent=gene-CLI86_03980;Dbxref=NCBI_GP:PDP44406.1;Name=PDP44406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224429.1;locus_tag=CLI86_03980;product=hypothetical protein;protein_id=PDP44406.1;transl_table=11 NSLJ01000007.1 Genbank gene 79780 81300 . + . ID=gene-CLI86_03985;Name=CLI86_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03985 NSLJ01000007.1 Protein Homology CDS 79780 81300 . + 0 ID=cds-PDP44407.1;Parent=gene-CLI86_03985;Dbxref=NCBI_GP:PDP44407.1;Name=PDP44407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018711600.1;locus_tag=CLI86_03985;product=NAD metabolism ATPase/kinase;protein_id=PDP44407.1;transl_table=11 NSLJ01000007.1 Genbank gene 81390 81857 . + . ID=gene-CLI86_03990;Name=CLI86_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03990 NSLJ01000007.1 GeneMarkS+ CDS 81390 81857 . + 0 ID=cds-PDP44408.1;Parent=gene-CLI86_03990;Dbxref=NCBI_GP:PDP44408.1;Name=PDP44408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_03990;product=hypothetical protein;protein_id=PDP44408.1;transl_table=11 NSLJ01000007.1 Genbank gene 81883 83199 . + . ID=gene-CLI86_03995;Name=CLI86_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_03995 NSLJ01000007.1 Protein Homology CDS 81883 83199 . + 0 ID=cds-PDP44438.1;Parent=gene-CLI86_03995;Dbxref=NCBI_GP:PDP44438.1;Name=PDP44438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008773122.1;locus_tag=CLI86_03995;product=RNA methyltransferase;protein_id=PDP44438.1;transl_table=11 NSLJ01000007.1 Genbank gene 83230 85407 . + . ID=gene-CLI86_04000;Name=CLI86_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04000 NSLJ01000007.1 Protein Homology CDS 83230 85407 . + 0 ID=cds-PDP44409.1;Parent=gene-CLI86_04000;Dbxref=NCBI_GP:PDP44409.1;Name=PDP44409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224425.1;locus_tag=CLI86_04000;product=S9 family peptidase;protein_id=PDP44409.1;transl_table=11 NSLJ01000007.1 Genbank gene 85529 86143 . - . ID=gene-CLI86_04005;Name=CLI86_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04005 NSLJ01000007.1 Protein Homology CDS 85529 86143 . - 0 ID=cds-PDP44410.1;Parent=gene-CLI86_04005;Dbxref=NCBI_GP:PDP44410.1;Name=PDP44410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224424.1;locus_tag=CLI86_04005;product=polysaccharide deacetylase family protein;protein_id=PDP44410.1;transl_table=11 NSLJ01000007.1 Genbank gene 86150 89413 . - . ID=gene-CLI86_04010;Name=CLI86_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04010 NSLJ01000007.1 Protein Homology CDS 86150 89413 . - 0 ID=cds-PDP44411.1;Parent=gene-CLI86_04010;Dbxref=NCBI_GP:PDP44411.1;Name=PDP44411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224423.1;locus_tag=CLI86_04010;product=DUF2723 domain-containing protein;protein_id=PDP44411.1;transl_table=11 NSLJ01000007.1 Genbank gene 89714 90148 . + . ID=gene-CLI86_04015;Name=CLI86_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04015 NSLJ01000007.1 Protein Homology CDS 89714 90148 . + 0 ID=cds-PDP44439.1;Parent=gene-CLI86_04015;Dbxref=NCBI_GP:PDP44439.1;Name=PDP44439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224422.1;locus_tag=CLI86_04015;product=VanZ family protein;protein_id=PDP44439.1;transl_table=11 NSLJ01000007.1 Genbank gene 90222 91196 . - . ID=gene-CLI86_04020;Name=CLI86_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04020 NSLJ01000007.1 Protein Homology CDS 90222 91196 . - 0 ID=cds-PDP44440.1;Parent=gene-CLI86_04020;Dbxref=NCBI_GP:PDP44440.1;Name=PDP44440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156141.1;locus_tag=CLI86_04020;product=polyprenyl synthetase family protein;protein_id=PDP44440.1;transl_table=11 NSLJ01000007.1 Genbank gene 91286 94090 . + . ID=gene-CLI86_04025;Name=CLI86_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04025 NSLJ01000007.1 Protein Homology CDS 91286 94090 . + 0 ID=cds-PDP44412.1;Parent=gene-CLI86_04025;Dbxref=NCBI_GP:PDP44412.1;Name=PDP44412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224420.1;locus_tag=CLI86_04025;product=DNA polymerase I;protein_id=PDP44412.1;transl_table=11 NSLJ01000007.1 Genbank gene 94172 94801 . + . ID=gene-CLI86_04030;Name=CLI86_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04030 NSLJ01000007.1 Protein Homology CDS 94172 94801 . + 0 ID=cds-PDP44413.1;Parent=gene-CLI86_04030;Dbxref=NCBI_GP:PDP44413.1;Name=PDP44413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011971477.1;locus_tag=CLI86_04030;product=uracil phosphoribosyltransferase;protein_id=PDP44413.1;transl_table=11 NSLJ01000007.1 Genbank gene 94827 96113 . + . ID=gene-CLI86_04035;Name=CLI86_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04035 NSLJ01000007.1 Protein Homology CDS 94827 96113 . + 0 ID=cds-PDP44414.1;Parent=gene-CLI86_04035;Dbxref=NCBI_GP:PDP44414.1;Name=PDP44414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224418.1;locus_tag=CLI86_04035;product=uracil permease;protein_id=PDP44414.1;transl_table=11 NSLJ01000007.1 Genbank gene 96227 97021 . + . ID=gene-CLI86_04040;Name=CLI86_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04040 NSLJ01000007.1 Protein Homology CDS 96227 97021 . + 0 ID=cds-PDP44415.1;Parent=gene-CLI86_04040;Dbxref=NCBI_GP:PDP44415.1;Name=PDP44415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965387.1;locus_tag=CLI86_04040;product=thymidylate synthase;protein_id=PDP44415.1;transl_table=11 NSLJ01000007.1 Genbank gene 97043 97534 . + . ID=gene-CLI86_04045;Name=CLI86_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04045 NSLJ01000007.1 Protein Homology CDS 97043 97534 . + 0 ID=cds-PDP44416.1;Parent=gene-CLI86_04045;Dbxref=NCBI_GP:PDP44416.1;Name=PDP44416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224415.1;locus_tag=CLI86_04045;product=diacylglycerol kinase;protein_id=PDP44416.1;transl_table=11 NSLJ01000007.1 Genbank gene 97605 98006 . + . ID=gene-CLI86_04050;Name=CLI86_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04050 NSLJ01000007.1 Protein Homology CDS 97605 98006 . + 0 ID=cds-PDP44417.1;Parent=gene-CLI86_04050;Dbxref=NCBI_GP:PDP44417.1;Name=PDP44417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584804.1;locus_tag=CLI86_04050;product=hypothetical protein;protein_id=PDP44417.1;transl_table=11 NSLJ01000007.1 Genbank gene 97984 99456 . + . ID=gene-CLI86_04055;Name=CLI86_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04055 NSLJ01000007.1 Protein Homology CDS 97984 99456 . + 0 ID=cds-PDP44418.1;Parent=gene-CLI86_04055;Dbxref=NCBI_GP:PDP44418.1;Name=PDP44418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07610.9;locus_tag=CLI86_04055;product=hypothetical protein;protein_id=PDP44418.1;transl_table=11 NSLJ01000007.1 Genbank gene 99530 100618 . + . ID=gene-CLI86_04060;Name=CLI86_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04060 NSLJ01000007.1 Protein Homology CDS 99530 100618 . + 0 ID=cds-PDP44419.1;Parent=gene-CLI86_04060;Dbxref=NCBI_GP:PDP44419.1;Name=PDP44419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007654870.1;locus_tag=CLI86_04060;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=PDP44419.1;transl_table=11 NSLJ01000007.1 Genbank gene 100775 101746 . - . ID=gene-CLI86_04065;Name=CLI86_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04065 NSLJ01000007.1 Protein Homology CDS 100775 101746 . - 0 ID=cds-PDP44420.1;Parent=gene-CLI86_04065;Dbxref=NCBI_GP:PDP44420.1;Name=PDP44420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224410.1;locus_tag=CLI86_04065;product=ROK family protein;protein_id=PDP44420.1;transl_table=11 NSLJ01000007.1 Genbank gene 101870 104965 . - . ID=gene-CLI86_04070;Name=CLI86_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04070 NSLJ01000007.1 Protein Homology CDS 101870 104965 . - 0 ID=cds-PDP44421.1;Parent=gene-CLI86_04070;Dbxref=NCBI_GP:PDP44421.1;Name=PDP44421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13476.4%2CHMM:PF13558.4;locus_tag=CLI86_04070;product=ATP-dependent exonuclease;protein_id=PDP44421.1;transl_table=11 NSLJ01000007.1 Genbank gene 105028 106218 . - . ID=gene-CLI86_04075;Name=CLI86_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04075 NSLJ01000007.1 Protein Homology CDS 105028 106218 . - 0 ID=cds-PDP44441.1;Parent=gene-CLI86_04075;Dbxref=NCBI_GP:PDP44441.1;Name=PDP44441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275459.1;locus_tag=CLI86_04075;product=exonuclease sbcCD subunit D;protein_id=PDP44441.1;transl_table=11 NSLJ01000007.1 Genbank gene 106233 108293 . - . ID=gene-CLI86_04080;Name=CLI86_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04080 NSLJ01000007.1 Protein Homology CDS 106233 108293 . - 0 ID=cds-PDP44422.1;Parent=gene-CLI86_04080;Dbxref=NCBI_GP:PDP44422.1;Name=PDP44422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224407.1;locus_tag=CLI86_04080;product=CoA ligase;protein_id=PDP44422.1;transl_table=11 NSLJ01000007.1 Genbank gene 108685 108909 . + . ID=gene-CLI86_04085;Name=CLI86_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04085 NSLJ01000007.1 GeneMarkS+ CDS 108685 108909 . + 0 ID=cds-PDP44423.1;Parent=gene-CLI86_04085;Dbxref=NCBI_GP:PDP44423.1;Name=PDP44423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04085;product=TonB-dependent receptor;protein_id=PDP44423.1;transl_table=11 NSLJ01000007.1 Genbank gene 108970 109275 . + . ID=gene-CLI86_04090;Name=CLI86_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04090 NSLJ01000007.1 Protein Homology CDS 108970 109275 . + 0 ID=cds-PDP44442.1;Parent=gene-CLI86_04090;Dbxref=NCBI_GP:PDP44442.1;Name=PDP44442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010184748.1;locus_tag=CLI86_04090;product=heavy metal-binding protein;protein_id=PDP44442.1;transl_table=11 NSLJ01000007.1 Genbank gene 109875 110237 . - . ID=gene-CLI86_04095;Name=CLI86_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04095 NSLJ01000007.1 Protein Homology CDS 109875 110237 . - 0 ID=cds-PDP44424.1;Parent=gene-CLI86_04095;Dbxref=NCBI_GP:PDP44424.1;Name=PDP44424.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13004.5;locus_tag=CLI86_04095;product=hypothetical protein;protein_id=PDP44424.1;transl_table=11 NSLJ01000007.1 Genbank gene 110276 112063 . - . ID=gene-CLI86_04100;Name=CLI86_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04100 NSLJ01000007.1 Protein Homology CDS 110276 112063 . - 0 ID=cds-PDP44425.1;Parent=gene-CLI86_04100;Dbxref=NCBI_GP:PDP44425.1;Name=PDP44425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854444.1;locus_tag=CLI86_04100;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44425.1;transl_table=11 NSLJ01000007.1 Genbank gene 112066 115560 . - . ID=gene-CLI86_04105;Name=CLI86_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04105 NSLJ01000007.1 Protein Homology CDS 112066 115560 . - 0 ID=cds-PDP44426.1;Parent=gene-CLI86_04105;Dbxref=NCBI_GP:PDP44426.1;Name=PDP44426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224401.1;locus_tag=CLI86_04105;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44426.1;transl_table=11 NSLJ01000007.1 Genbank gene 116555 117724 . - . ID=gene-CLI86_04110;Name=CLI86_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04110 NSLJ01000007.1 Protein Homology CDS 116555 117724 . - 0 ID=cds-PDP44427.1;Parent=gene-CLI86_04110;Dbxref=NCBI_GP:PDP44427.1;Name=PDP44427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13306.4;locus_tag=CLI86_04110;product=hypothetical protein;protein_id=PDP44427.1;transl_table=11 NSLJ01000007.1 Genbank gene 117884 118108 . + . ID=gene-CLI86_04115;Name=CLI86_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04115 NSLJ01000007.1 GeneMarkS+ CDS 117884 118108 . + 0 ID=cds-PDP44428.1;Parent=gene-CLI86_04115;Dbxref=NCBI_GP:PDP44428.1;Name=PDP44428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04115;product=hypothetical protein;protein_id=PDP44428.1;transl_table=11 ##sequence-region NSLJ01000080.1 1 2027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000080.1 Genbank region 1 2027 . + . ID=NSLJ01000080.1:1..2027;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000080.1 Genbank gene 437 1675 . - . ID=gene-CLI86_13760;Name=CLI86_13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13760 NSLJ01000080.1 GeneMarkS+ CDS 437 1675 . - 0 ID=cds-PDP41042.1;Parent=gene-CLI86_13760;Dbxref=NCBI_GP:PDP41042.1;Name=PDP41042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13760;product=hypothetical protein;protein_id=PDP41042.1;transl_table=11 ##sequence-region NSLJ01000081.1 1 1944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000081.1 Genbank region 1 1944 . + . ID=NSLJ01000081.1:1..1944;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000081.1 Genbank gene 129 1397 . - . ID=gene-CLI86_13765;Name=CLI86_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13765 NSLJ01000081.1 Protein Homology CDS 129 1397 . - 0 ID=cds-PDP41002.1;Parent=gene-CLI86_13765;Dbxref=NCBI_GP:PDP41002.1;Name=PDP41002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007664660.1;locus_tag=CLI86_13765;product=AAA family ATPase;protein_id=PDP41002.1;transl_table=11 ##sequence-region NSLJ01000082.1 1 1800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000082.1 Genbank region 1 1800 . + . ID=NSLJ01000082.1:1..1800;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000082.1 Genbank gene 1 351 . + . ID=gene-CLI86_13770;Name=CLI86_13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13770;partial=true;start_range=.,1 NSLJ01000082.1 GeneMarkS+ CDS 1 351 . + 0 ID=cds-PDP40963.1;Parent=gene-CLI86_13770;Dbxref=NCBI_GP:PDP40963.1;Name=PDP40963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13770;partial=true;product=hypothetical protein;protein_id=PDP40963.1;start_range=.,1;transl_table=11 NSLJ01000082.1 Genbank pseudogene 355 1164 . + . ID=gene-CLI86_13775;Name=CLI86_13775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13775;pseudo=true NSLJ01000082.1 Protein Homology CDS 355 1164 . + 0 ID=cds-CLI86_13775;Parent=gene-CLI86_13775;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224290.1;locus_tag=CLI86_13775;product=ABC transporter;pseudo=true;transl_table=11 NSLJ01000082.1 Genbank gene 1185 1670 . - . ID=gene-CLI86_13780;Name=CLI86_13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13780 NSLJ01000082.1 Protein Homology CDS 1185 1670 . - 0 ID=cds-PDP40964.1;Parent=gene-CLI86_13780;Dbxref=NCBI_GP:PDP40964.1;Name=PDP40964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01609.19;locus_tag=CLI86_13780;product=IS4/IS5 family transposase;protein_id=PDP40964.1;transl_table=11 NSLJ01000082.1 Genbank gene 1671 1800 . - . ID=gene-CLI86_13785;Name=CLI86_13785;end_range=1800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13785;partial=true NSLJ01000082.1 GeneMarkS+ CDS 1671 1800 . - 1 ID=cds-PDP40965.1;Parent=gene-CLI86_13785;Dbxref=NCBI_GP:PDP40965.1;Name=PDP40965.1;end_range=1800,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_13785;partial=true;product=IS4 family transposase;protein_id=PDP40965.1;transl_table=11 ##sequence-region NSLJ01000083.1 1 1798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000083.1 Genbank region 1 1798 . + . ID=NSLJ01000083.1:1..1798;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000083.1 Genbank gene 1 1798 . - . ID=gene-CLI86_13790;Name=CLI86_13790;end_range=1798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13790;partial=true;start_range=.,1 NSLJ01000083.1 Protein Homology CDS 1 1798 . - 2 ID=cds-PDP40961.1;Parent=gene-CLI86_13790;Dbxref=NCBI_GP:PDP40961.1;Name=PDP40961.1;end_range=1798,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224934.1;locus_tag=CLI86_13790;partial=true;product=hypothetical protein;protein_id=PDP40961.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000084.1 1 1562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000084.1 Genbank region 1 1562 . + . ID=NSLJ01000084.1:1..1562;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000084.1 Genbank gene 1 116 . - . ID=gene-CLI86_13795;Name=CLI86_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13795;partial=true;start_range=.,1 NSLJ01000084.1 Protein Homology CDS 1 116 . - 0 ID=cds-PDP40922.1;Parent=gene-CLI86_13795;Dbxref=NCBI_GP:PDP40922.1;Name=PDP40922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223832.1;locus_tag=CLI86_13795;partial=true;product=S26 family signal peptidase;protein_id=PDP40922.1;start_range=.,1;transl_table=11 NSLJ01000084.1 Genbank gene 100 1562 . - . ID=gene-CLI86_13800;Name=CLI86_13800;end_range=1562,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13800;partial=true NSLJ01000084.1 Protein Homology CDS 100 1562 . - 2 ID=cds-PDP40923.1;Parent=gene-CLI86_13800;Dbxref=NCBI_GP:PDP40923.1;Name=PDP40923.1;end_range=1562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223817.1;locus_tag=CLI86_13800;partial=true;product=polymerase;protein_id=PDP40923.1;transl_table=11 ##sequence-region NSLJ01000085.1 1 1475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000085.1 Genbank region 1 1475 . + . ID=NSLJ01000085.1:1..1475;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000085.1 Genbank gene 11 1444 . - . ID=gene-CLI86_13805;Name=CLI86_13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13805 NSLJ01000085.1 Protein Homology CDS 11 1444 . - 0 ID=cds-PDP40920.1;Parent=gene-CLI86_13805;Dbxref=NCBI_GP:PDP40920.1;Name=PDP40920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223980.1;locus_tag=CLI86_13805;product=IS5/IS1182 family transposase;protein_id=PDP40920.1;transl_table=11 ##sequence-region NSLJ01000086.1 1 1253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000086.1 Genbank region 1 1253 . + . ID=NSLJ01000086.1:1..1253;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000086.1 Genbank gene 1 1086 . + . ID=gene-CLI86_13810;Name=CLI86_13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13810;partial=true;start_range=.,1 NSLJ01000086.1 Protein Homology CDS 1 1086 . + 0 ID=cds-PDP40887.1;Parent=gene-CLI86_13810;Dbxref=NCBI_GP:PDP40887.1;Name=PDP40887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224523.1;locus_tag=CLI86_13810;partial=true;product=IS110 family transposase;protein_id=PDP40887.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000087.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000087.1 Genbank region 1 1221 . + . ID=NSLJ01000087.1:1..1221;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000087.1 Genbank gene 61 685 . - . ID=gene-CLI86_13815;Name=CLI86_13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13815 NSLJ01000087.1 Protein Homology CDS 632 685 . - 0 ID=cds-PDP40856.1;Parent=gene-CLI86_13815;Dbxref=NCBI_GP:PDP40856.1;Name=PDP40856.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011416938.1;locus_tag=CLI86_13815;product=IS630 family transposase;protein_id=PDP40856.1;transl_table=11 NSLJ01000087.1 Protein Homology CDS 61 630 . - 0 ID=cds-PDP40856.1;Parent=gene-CLI86_13815;Dbxref=NCBI_GP:PDP40856.1;Name=PDP40856.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011416938.1;locus_tag=CLI86_13815;product=IS630 family transposase;protein_id=PDP40856.1;transl_table=11 NSLJ01000087.1 Genbank gene 733 1191 . - . ID=gene-CLI86_13820;Name=CLI86_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13820 NSLJ01000087.1 Protein Homology CDS 733 1191 . - 0 ID=cds-PDP40857.1;Parent=gene-CLI86_13820;Dbxref=NCBI_GP:PDP40857.1;Name=PDP40857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13565.4;locus_tag=CLI86_13820;product=helix-turn-helix domain-containing protein;protein_id=PDP40857.1;transl_table=11 ##sequence-region NSLJ01000088.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000088.1 Genbank region 1 1121 . + . ID=NSLJ01000088.1:1..1121;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000088.1 Genbank gene 1 448 . - . ID=gene-CLI86_13825;Name=CLI86_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13825;partial=true;start_range=.,1 NSLJ01000088.1 Protein Homology CDS 1 448 . - 0 ID=cds-PDP40854.1;Parent=gene-CLI86_13825;Dbxref=NCBI_GP:PDP40854.1;Name=PDP40854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223556.1;locus_tag=CLI86_13825;partial=true;product=6-bladed beta-propeller;protein_id=PDP40854.1;start_range=.,1;transl_table=11 NSLJ01000088.1 Genbank gene 706 957 . - . ID=gene-CLI86_13830;Name=CLI86_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13830 NSLJ01000088.1 Protein Homology CDS 706 957 . - 0 ID=cds-PDP40853.1;Parent=gene-CLI86_13830;Dbxref=NCBI_GP:PDP40853.1;Name=PDP40853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005791817.1;locus_tag=CLI86_13830;product=rSAM-modified peptide;protein_id=PDP40853.1;transl_table=11 ##sequence-region NSLJ01000089.1 1 1034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000089.1 Genbank region 1 1034 . + . ID=NSLJ01000089.1:1..1034;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000089.1 Genbank pseudogene 2 385 . + . ID=gene-CLI86_13835;Name=CLI86_13835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13835;pseudo=true NSLJ01000089.1 Protein Homology CDS 2 385 . + 0 ID=cds-CLI86_13835;Parent=gene-CLI86_13835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226176.1;locus_tag=CLI86_13835;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000089.1 Genbank gene 403 1034 . + . ID=gene-CLI86_13840;Name=CLI86_13840;end_range=1034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13840;partial=true NSLJ01000089.1 Protein Homology CDS 403 1034 . + 0 ID=cds-PDP40827.1;Parent=gene-CLI86_13840;Dbxref=NCBI_GP:PDP40827.1;Name=PDP40827.1;end_range=1034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226175.1;locus_tag=CLI86_13840;partial=true;product=hypothetical protein;protein_id=PDP40827.1;transl_table=11 ##sequence-region NSLJ01000008.1 1 118066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000008.1 Genbank region 1 118066 . + . ID=NSLJ01000008.1:1..118066;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000008.1 Genbank gene 1 572 . + . ID=gene-CLI86_04120;Name=CLI86_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04120;partial=true;start_range=.,1 NSLJ01000008.1 Protein Homology CDS 1 572 . + 2 ID=cds-PDP44243.1;Parent=gene-CLI86_04120;Dbxref=NCBI_GP:PDP44243.1;Name=PDP44243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_04120;partial=true;product=IS1595 family transposase;protein_id=PDP44243.1;start_range=.,1;transl_table=11 NSLJ01000008.1 Genbank pseudogene 775 997 . + . ID=gene-CLI86_04125;Name=CLI86_04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04125;pseudo=true NSLJ01000008.1 Protein Homology CDS 775 997 . + 0 ID=cds-CLI86_04125;Parent=gene-CLI86_04125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006260894.1;locus_tag=CLI86_04125;product=transposase;pseudo=true;transl_table=11 NSLJ01000008.1 Genbank gene 1161 1343 . - . ID=gene-CLI86_04130;Name=CLI86_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04130 NSLJ01000008.1 GeneMarkS+ CDS 1161 1343 . - 0 ID=cds-PDP44244.1;Parent=gene-CLI86_04130;Dbxref=NCBI_GP:PDP44244.1;Name=PDP44244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04130;product=hypothetical protein;protein_id=PDP44244.1;transl_table=11 NSLJ01000008.1 Genbank gene 1363 1554 . + . ID=gene-CLI86_04135;Name=CLI86_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04135 NSLJ01000008.1 GeneMarkS+ CDS 1363 1554 . + 0 ID=cds-PDP44245.1;Parent=gene-CLI86_04135;Dbxref=NCBI_GP:PDP44245.1;Name=PDP44245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04135;product=hypothetical protein;protein_id=PDP44245.1;transl_table=11 NSLJ01000008.1 Genbank direct_repeat 2991 6025 . + . ID=id-NSLJ01000008.1:2991..6025;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=3057..3086;rpt_unit_seq=gtttcaattctatgatagtccgattaaaag NSLJ01000008.1 Genbank gene 6238 6501 . - . ID=gene-CLI86_04140;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CLI86_04140 NSLJ01000008.1 Protein Homology CDS 6238 6501 . - 0 ID=cds-PDP44246.1;Parent=gene-CLI86_04140;Dbxref=NCBI_GP:PDP44246.1;Name=PDP44246.1;gbkey=CDS;gene=cas2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964772.1;locus_tag=CLI86_04140;product=CRISPR-associated endonuclease Cas2;protein_id=PDP44246.1;transl_table=11 NSLJ01000008.1 Genbank gene 6501 7517 . - . ID=gene-CLI86_04145;Name=CLI86_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04145 NSLJ01000008.1 Protein Homology CDS 6501 7517 . - 0 ID=cds-PDP44247.1;Parent=gene-CLI86_04145;Dbxref=NCBI_GP:PDP44247.1;Name=PDP44247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007481201.1;locus_tag=CLI86_04145;product=subtype I-B CRISPR-associated endonuclease Cas1;protein_id=PDP44247.1;transl_table=11 NSLJ01000008.1 Genbank gene 7514 8314 . - . ID=gene-CLI86_04150;Name=CLI86_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04150 NSLJ01000008.1 GeneMarkS+ CDS 7514 8314 . - 0 ID=cds-PDP44248.1;Parent=gene-CLI86_04150;Dbxref=NCBI_GP:PDP44248.1;Name=PDP44248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04150;product=hypothetical protein;protein_id=PDP44248.1;transl_table=11 NSLJ01000008.1 Genbank gene 8311 10011 . - . ID=gene-CLI86_04155;Name=csm5;gbkey=Gene;gene=csm5;gene_biotype=protein_coding;locus_tag=CLI86_04155 NSLJ01000008.1 Protein Homology CDS 8311 10011 . - 0 ID=cds-PDP44249.1;Parent=gene-CLI86_04155;Dbxref=NCBI_GP:PDP44249.1;Name=PDP44249.1;gbkey=CDS;gene=csm5;inference=COORDINATES: protein motif:HMM:PF03787.13;locus_tag=CLI86_04155;product=type III-A CRISPR-associated RAMP protein Csm5;protein_id=PDP44249.1;transl_table=11 NSLJ01000008.1 Genbank gene 9950 10963 . - . ID=gene-CLI86_04160;Name=csm4;gbkey=Gene;gene=csm4;gene_biotype=protein_coding;locus_tag=CLI86_04160 NSLJ01000008.1 Protein Homology CDS 9950 10963 . - 0 ID=cds-PDP44250.1;Parent=gene-CLI86_04160;Dbxref=NCBI_GP:PDP44250.1;Name=PDP44250.1;gbkey=CDS;gene=csm4;inference=COORDINATES: protein motif:HMM:TIGR01903;locus_tag=CLI86_04160;product=type III-A CRISPR-associated RAMP protein Csm4;protein_id=PDP44250.1;transl_table=11 NSLJ01000008.1 Genbank gene 10960 11661 . - . ID=gene-CLI86_04165;Name=csm3;gbkey=Gene;gene=csm3;gene_biotype=protein_coding;locus_tag=CLI86_04165 NSLJ01000008.1 Protein Homology CDS 10960 11661 . - 0 ID=cds-PDP44251.1;Parent=gene-CLI86_04165;Dbxref=NCBI_GP:PDP44251.1;Name=PDP44251.1;gbkey=CDS;gene=csm3;inference=COORDINATES: protein motif:HMM:TIGR02582;locus_tag=CLI86_04165;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=PDP44251.1;transl_table=11 NSLJ01000008.1 Genbank gene 11658 12083 . - . ID=gene-CLI86_04170;Name=CLI86_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04170 NSLJ01000008.1 Protein Homology CDS 11658 12083 . - 0 ID=cds-PDP44252.1;Parent=gene-CLI86_04170;Dbxref=NCBI_GP:PDP44252.1;Name=PDP44252.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03750.11;locus_tag=CLI86_04170;product=hypothetical protein;protein_id=PDP44252.1;transl_table=11 NSLJ01000008.1 Genbank gene 12064 13659 . - . ID=gene-CLI86_04175;Name=CLI86_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04175 NSLJ01000008.1 GeneMarkS+ CDS 12064 13659 . - 0 ID=cds-PDP44253.1;Parent=gene-CLI86_04175;Dbxref=NCBI_GP:PDP44253.1;Name=PDP44253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04175;product=hypothetical protein;protein_id=PDP44253.1;transl_table=11 NSLJ01000008.1 Genbank gene 13706 14236 . - . ID=gene-CLI86_04180;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=CLI86_04180 NSLJ01000008.1 Protein Homology CDS 13706 14236 . - 0 ID=cds-PDP44254.1;Parent=gene-CLI86_04180;Dbxref=NCBI_GP:PDP44254.1;Name=PDP44254.1;gbkey=CDS;gene=cas4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931452.1;locus_tag=CLI86_04180;product=CRISPR-associated protein Cas4;protein_id=PDP44254.1;transl_table=11 NSLJ01000008.1 Genbank gene 14241 14477 . - . ID=gene-CLI86_04185;Name=CLI86_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04185 NSLJ01000008.1 GeneMarkS+ CDS 14241 14477 . - 0 ID=cds-PDP44255.1;Parent=gene-CLI86_04185;Dbxref=NCBI_GP:PDP44255.1;Name=PDP44255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04185;product=hypothetical protein;protein_id=PDP44255.1;transl_table=11 NSLJ01000008.1 Genbank gene 14511 15509 . - . ID=gene-CLI86_04190;Name=CLI86_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04190 NSLJ01000008.1 Protein Homology CDS 14511 15509 . - 0 ID=cds-PDP44256.1;Parent=gene-CLI86_04190;Dbxref=NCBI_GP:PDP44256.1;Name=PDP44256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225628.1;locus_tag=CLI86_04190;product=cell filamentation protein Fic;protein_id=PDP44256.1;transl_table=11 NSLJ01000008.1 Genbank gene 15532 16086 . - . ID=gene-CLI86_04195;Name=CLI86_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04195 NSLJ01000008.1 GeneMarkS+ CDS 15532 16086 . - 0 ID=cds-PDP44257.1;Parent=gene-CLI86_04195;Dbxref=NCBI_GP:PDP44257.1;Name=PDP44257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04195;product=hypothetical protein;protein_id=PDP44257.1;transl_table=11 NSLJ01000008.1 Genbank gene 16093 18576 . - . ID=gene-CLI86_04200;Name=CLI86_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04200 NSLJ01000008.1 Protein Homology CDS 16093 18576 . - 0 ID=cds-PDP44258.1;Parent=gene-CLI86_04200;Dbxref=NCBI_GP:PDP44258.1;Name=PDP44258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019540684.1;locus_tag=CLI86_04200;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=PDP44258.1;transl_table=11 NSLJ01000008.1 Genbank gene 18561 19271 . - . ID=gene-CLI86_04205;Name=CLI86_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04205 NSLJ01000008.1 Protein Homology CDS 18561 19271 . - 0 ID=cds-PDP44259.1;Parent=gene-CLI86_04205;Dbxref=NCBI_GP:PDP44259.1;Name=PDP44259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016779144.1;locus_tag=CLI86_04205;product=CRISPR-associated protein Cas5;protein_id=PDP44259.1;transl_table=11 NSLJ01000008.1 Genbank gene 19268 20221 . - . ID=gene-CLI86_04210;Name=CLI86_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04210 NSLJ01000008.1 Protein Homology CDS 19268 20221 . - 0 ID=cds-PDP44260.1;Parent=gene-CLI86_04210;Dbxref=NCBI_GP:PDP44260.1;Name=PDP44260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019540682.1;locus_tag=CLI86_04210;product=type I-B CRISPR-associated protein Cas7/Csh2;protein_id=PDP44260.1;transl_table=11 NSLJ01000008.1 Genbank gene 20234 22213 . - . ID=gene-CLI86_04215;Name=CLI86_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04215 NSLJ01000008.1 GeneMarkS+ CDS 20234 22213 . - 0 ID=cds-PDP44261.1;Parent=gene-CLI86_04215;Dbxref=NCBI_GP:PDP44261.1;Name=PDP44261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04215;product=hypothetical protein;protein_id=PDP44261.1;transl_table=11 NSLJ01000008.1 Genbank gene 22575 23198 . - . ID=gene-CLI86_04220;Name=CLI86_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04220 NSLJ01000008.1 Protein Homology CDS 22575 23198 . - 0 ID=cds-PDP44262.1;Parent=gene-CLI86_04220;Dbxref=NCBI_GP:PDP44262.1;Name=PDP44262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07929.9;locus_tag=CLI86_04220;product=plasmid pRiA4b ORF-3 family protein;protein_id=PDP44262.1;transl_table=11 NSLJ01000008.1 Genbank gene 23225 24025 . - . ID=gene-CLI86_04225;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=CLI86_04225 NSLJ01000008.1 Protein Homology CDS 23225 24025 . - 0 ID=cds-PDP44263.1;Parent=gene-CLI86_04225;Dbxref=NCBI_GP:PDP44263.1;Name=PDP44263.1;gbkey=CDS;gene=cas6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225621.1;locus_tag=CLI86_04225;product=CRISPR-associated endoribonuclease Cas6;protein_id=PDP44263.1;transl_table=11 NSLJ01000008.1 Genbank gene 24158 24742 . - . ID=gene-CLI86_04230;Name=CLI86_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04230 NSLJ01000008.1 Protein Homology CDS 24158 24742 . - 0 ID=cds-PDP44328.1;Parent=gene-CLI86_04230;Dbxref=NCBI_GP:PDP44328.1;Name=PDP44328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225619.1;locus_tag=CLI86_04230;product=RNA polymerase sigma-70 factor;protein_id=PDP44328.1;transl_table=11 NSLJ01000008.1 Genbank gene 24768 25646 . - . ID=gene-CLI86_04235;Name=CLI86_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04235 NSLJ01000008.1 Protein Homology CDS 24768 25646 . - 0 ID=cds-PDP44264.1;Parent=gene-CLI86_04235;Dbxref=NCBI_GP:PDP44264.1;Name=PDP44264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225618.1;locus_tag=CLI86_04235;product=acyltransferase;protein_id=PDP44264.1;transl_table=11 NSLJ01000008.1 Genbank gene 25652 26686 . - . ID=gene-CLI86_04240;Name=CLI86_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04240 NSLJ01000008.1 Protein Homology CDS 25652 26686 . - 0 ID=cds-PDP44265.1;Parent=gene-CLI86_04240;Dbxref=NCBI_GP:PDP44265.1;Name=PDP44265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225617.1;locus_tag=CLI86_04240;product=agmatine deiminase;protein_id=PDP44265.1;transl_table=11 NSLJ01000008.1 Genbank gene 26683 27315 . - . ID=gene-CLI86_04245;Name=CLI86_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04245 NSLJ01000008.1 Protein Homology CDS 26683 27315 . - 0 ID=cds-PDP44329.1;Parent=gene-CLI86_04245;Dbxref=NCBI_GP:PDP44329.1;Name=PDP44329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004326834.1;locus_tag=CLI86_04245;product=diacylglucosamine hydrolase;protein_id=PDP44329.1;transl_table=11 NSLJ01000008.1 Genbank gene 27513 27586 . - . ID=gene-CLI86_04250;Name=CLI86_04250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_04250 NSLJ01000008.1 tRNAscan-SE tRNA 27513 27586 . - . ID=rna-CLI86_04250;Parent=gene-CLI86_04250;anticodon=(pos:complement(27550..27552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_04250;product=tRNA-Arg NSLJ01000008.1 tRNAscan-SE exon 27513 27586 . - . ID=exon-CLI86_04250-1;Parent=rna-CLI86_04250;anticodon=(pos:complement(27550..27552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_04250;product=tRNA-Arg NSLJ01000008.1 Genbank gene 27659 29962 . - . ID=gene-CLI86_04255;Name=CLI86_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04255 NSLJ01000008.1 Protein Homology CDS 27659 29962 . - 0 ID=cds-PDP44330.1;Parent=gene-CLI86_04255;Dbxref=NCBI_GP:PDP44330.1;Name=PDP44330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857656.1;locus_tag=CLI86_04255;product=patatin;protein_id=PDP44330.1;transl_table=11 NSLJ01000008.1 Genbank gene 29977 31905 . - . ID=gene-CLI86_04260;Name=CLI86_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04260 NSLJ01000008.1 Protein Homology CDS 29977 31905 . - 0 ID=cds-PDP44331.1;Parent=gene-CLI86_04260;Dbxref=NCBI_GP:PDP44331.1;Name=PDP44331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011965965.1;locus_tag=CLI86_04260;product=NAD(+) synthase;protein_id=PDP44331.1;transl_table=11 NSLJ01000008.1 Genbank gene 32122 34317 . - . ID=gene-CLI86_04265;Name=CLI86_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04265 NSLJ01000008.1 Protein Homology CDS 32122 34317 . - 0 ID=cds-PDP44266.1;Parent=gene-CLI86_04265;Dbxref=NCBI_GP:PDP44266.1;Name=PDP44266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225613.1;locus_tag=CLI86_04265;product=glutamine synthetase type III;protein_id=PDP44266.1;transl_table=11 NSLJ01000008.1 Genbank gene 34339 35373 . - . ID=gene-CLI86_04270;Name=CLI86_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04270 NSLJ01000008.1 Protein Homology CDS 34339 35373 . - 0 ID=cds-PDP44267.1;Parent=gene-CLI86_04270;Dbxref=NCBI_GP:PDP44267.1;Name=PDP44267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225612.1;locus_tag=CLI86_04270;product=aspartate--ammonia ligase;protein_id=PDP44267.1;transl_table=11 NSLJ01000008.1 Genbank gene 35578 37026 . + . ID=gene-CLI86_04275;Name=CLI86_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04275 NSLJ01000008.1 Protein Homology CDS 35578 37026 . + 0 ID=cds-PDP44268.1;Parent=gene-CLI86_04275;Dbxref=NCBI_GP:PDP44268.1;Name=PDP44268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225610.1;locus_tag=CLI86_04275;product=peptidase S8;protein_id=PDP44268.1;transl_table=11 NSLJ01000008.1 Genbank gene 37013 38344 . + . ID=gene-CLI86_04280;Name=CLI86_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04280 NSLJ01000008.1 Protein Homology CDS 37013 38344 . + 0 ID=cds-PDP44269.1;Parent=gene-CLI86_04280;Dbxref=NCBI_GP:PDP44269.1;Name=PDP44269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225609.1;locus_tag=CLI86_04280;product=exodeoxyribonuclease VII large subunit;protein_id=PDP44269.1;transl_table=11 NSLJ01000008.1 Genbank gene 38360 38563 . + . ID=gene-CLI86_04285;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CLI86_04285 NSLJ01000008.1 Protein Homology CDS 38360 38563 . + 0 ID=cds-PDP44270.1;Parent=gene-CLI86_04285;Dbxref=NCBI_GP:PDP44270.1;Name=PDP44270.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225608.1;locus_tag=CLI86_04285;product=exodeoxyribonuclease VII small subunit;protein_id=PDP44270.1;transl_table=11 NSLJ01000008.1 Genbank gene 38574 39239 . + . ID=gene-CLI86_04290;Name=CLI86_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04290 NSLJ01000008.1 Protein Homology CDS 38574 39239 . + 0 ID=cds-PDP44271.1;Parent=gene-CLI86_04290;Dbxref=NCBI_GP:PDP44271.1;Name=PDP44271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225607.1;locus_tag=CLI86_04290;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=PDP44271.1;transl_table=11 NSLJ01000008.1 Genbank gene 39603 40181 . + . ID=gene-CLI86_04295;Name=CLI86_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04295 NSLJ01000008.1 Protein Homology CDS 39603 40181 . + 0 ID=cds-PDP44272.1;Parent=gene-CLI86_04295;Dbxref=NCBI_GP:PDP44272.1;Name=PDP44272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225605.1;locus_tag=CLI86_04295;product=hypothetical protein;protein_id=PDP44272.1;transl_table=11 NSLJ01000008.1 Genbank pseudogene 40429 41592 . + . ID=gene-CLI86_04300;Name=CLI86_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04300;pseudo=true NSLJ01000008.1 Protein Homology CDS 40429 41592 . + 0 ID=cds-CLI86_04300;Parent=gene-CLI86_04300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007564783.1;locus_tag=CLI86_04300;product=IS4 family transposase;pseudo=true;transl_table=11 NSLJ01000008.1 Genbank gene 41841 43793 . - . ID=gene-CLI86_04305;Name=CLI86_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04305 NSLJ01000008.1 GeneMarkS+ CDS 41841 43793 . - 0 ID=cds-PDP44273.1;Parent=gene-CLI86_04305;Dbxref=NCBI_GP:PDP44273.1;Name=PDP44273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04305;product=hypothetical protein;protein_id=PDP44273.1;transl_table=11 NSLJ01000008.1 Genbank gene 43802 44368 . - . ID=gene-CLI86_04310;Name=CLI86_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04310 NSLJ01000008.1 Protein Homology CDS 43802 44368 . - 0 ID=cds-PDP44274.1;Parent=gene-CLI86_04310;Dbxref=NCBI_GP:PDP44274.1;Name=PDP44274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225602.1;locus_tag=CLI86_04310;product=hypothetical protein;protein_id=PDP44274.1;transl_table=11 NSLJ01000008.1 Genbank gene 44368 44898 . - . ID=gene-CLI86_04315;Name=CLI86_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04315 NSLJ01000008.1 Protein Homology CDS 44368 44898 . - 0 ID=cds-PDP44332.1;Parent=gene-CLI86_04315;Dbxref=NCBI_GP:PDP44332.1;Name=PDP44332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225601.1;locus_tag=CLI86_04315;product=stage II sporulation protein M;protein_id=PDP44332.1;transl_table=11 NSLJ01000008.1 Genbank gene 44947 45180 . - . ID=gene-CLI86_04320;Name=CLI86_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04320 NSLJ01000008.1 GeneMarkS+ CDS 44947 45180 . - 0 ID=cds-PDP44275.1;Parent=gene-CLI86_04320;Dbxref=NCBI_GP:PDP44275.1;Name=PDP44275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04320;product=hypothetical protein;protein_id=PDP44275.1;transl_table=11 NSLJ01000008.1 Genbank gene 45247 45897 . - . ID=gene-CLI86_04325;Name=CLI86_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04325 NSLJ01000008.1 GeneMarkS+ CDS 45247 45897 . - 0 ID=cds-PDP44276.1;Parent=gene-CLI86_04325;Dbxref=NCBI_GP:PDP44276.1;Name=PDP44276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04325;product=hypothetical protein;protein_id=PDP44276.1;transl_table=11 NSLJ01000008.1 Genbank gene 45968 46261 . - . ID=gene-CLI86_04330;Name=CLI86_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04330 NSLJ01000008.1 GeneMarkS+ CDS 45968 46261 . - 0 ID=cds-PDP44277.1;Parent=gene-CLI86_04330;Dbxref=NCBI_GP:PDP44277.1;Name=PDP44277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04330;product=hypothetical protein;protein_id=PDP44277.1;transl_table=11 NSLJ01000008.1 Genbank gene 46284 46571 . - . ID=gene-CLI86_04335;Name=CLI86_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04335 NSLJ01000008.1 Protein Homology CDS 46284 46571 . - 0 ID=cds-PDP44278.1;Parent=gene-CLI86_04335;Dbxref=NCBI_GP:PDP44278.1;Name=PDP44278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005775404.1;locus_tag=CLI86_04335;product=hypothetical protein;protein_id=PDP44278.1;transl_table=11 NSLJ01000008.1 Genbank gene 46977 48734 . - . ID=gene-CLI86_04340;Name=CLI86_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04340 NSLJ01000008.1 Protein Homology CDS 46977 48734 . - 0 ID=cds-PDP44279.1;Parent=gene-CLI86_04340;Dbxref=NCBI_GP:PDP44279.1;Name=PDP44279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225598.1;locus_tag=CLI86_04340;product=hypothetical protein;protein_id=PDP44279.1;transl_table=11 NSLJ01000008.1 Genbank gene 48731 49372 . - . ID=gene-CLI86_04345;Name=CLI86_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04345 NSLJ01000008.1 GeneMarkS+ CDS 48731 49372 . - 0 ID=cds-PDP44280.1;Parent=gene-CLI86_04345;Dbxref=NCBI_GP:PDP44280.1;Name=PDP44280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04345;product=hypothetical protein;protein_id=PDP44280.1;transl_table=11 NSLJ01000008.1 Genbank gene 49424 50500 . - . ID=gene-CLI86_04350;Name=CLI86_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04350 NSLJ01000008.1 Protein Homology CDS 49424 50500 . - 0 ID=cds-PDP44281.1;Parent=gene-CLI86_04350;Dbxref=NCBI_GP:PDP44281.1;Name=PDP44281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225596.1;locus_tag=CLI86_04350;product=RND transporter;protein_id=PDP44281.1;transl_table=11 NSLJ01000008.1 Genbank gene 50504 51730 . - . ID=gene-CLI86_04355;Name=CLI86_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04355 NSLJ01000008.1 Protein Homology CDS 50504 51730 . - 0 ID=cds-PDP44282.1;Parent=gene-CLI86_04355;Dbxref=NCBI_GP:PDP44282.1;Name=PDP44282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02687.19;locus_tag=CLI86_04355;product=ABC transporter permease;protein_id=PDP44282.1;transl_table=11 NSLJ01000008.1 Genbank gene 51894 53099 . + . ID=gene-CLI86_04360;Name=CLI86_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04360 NSLJ01000008.1 Protein Homology CDS 51894 53099 . + 0 ID=cds-PDP44283.1;Parent=gene-CLI86_04360;Dbxref=NCBI_GP:PDP44283.1;Name=PDP44283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225594.1;locus_tag=CLI86_04360;product=N-glycanase;protein_id=PDP44283.1;transl_table=11 NSLJ01000008.1 Genbank gene 53141 53479 . - . ID=gene-CLI86_04365;Name=CLI86_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04365 NSLJ01000008.1 GeneMarkS+ CDS 53141 53479 . - 0 ID=cds-PDP44284.1;Parent=gene-CLI86_04365;Dbxref=NCBI_GP:PDP44284.1;Name=PDP44284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04365;product=transcriptional regulator;protein_id=PDP44284.1;transl_table=11 NSLJ01000008.1 Genbank gene 54027 55454 . - . ID=gene-CLI86_04370;Name=CLI86_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04370 NSLJ01000008.1 Protein Homology CDS 54027 55454 . - 0 ID=cds-PDP44285.1;Parent=gene-CLI86_04370;Dbxref=NCBI_GP:PDP44285.1;Name=PDP44285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225591.1;locus_tag=CLI86_04370;product=MFS transporter;protein_id=PDP44285.1;transl_table=11 NSLJ01000008.1 Genbank gene 55503 56174 . - . ID=gene-CLI86_04375;Name=CLI86_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04375 NSLJ01000008.1 Protein Homology CDS 55503 56174 . - 0 ID=cds-PDP44286.1;Parent=gene-CLI86_04375;Dbxref=NCBI_GP:PDP44286.1;Name=PDP44286.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008144839.1;locus_tag=CLI86_04375;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=PDP44286.1;transl_table=11 NSLJ01000008.1 Genbank gene 56201 56992 . - . ID=gene-CLI86_04380;Name=CLI86_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04380 NSLJ01000008.1 Protein Homology CDS 56201 56992 . - 0 ID=cds-PDP44287.1;Parent=gene-CLI86_04380;Dbxref=NCBI_GP:PDP44287.1;Name=PDP44287.1;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618397.1;locus_tag=CLI86_04380;product=gluconate 5-dehydrogenase;protein_id=PDP44287.1;transl_table=11 NSLJ01000008.1 Genbank gene 57029 58069 . - . ID=gene-CLI86_04385;Name=CLI86_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04385 NSLJ01000008.1 Protein Homology CDS 57029 58069 . - 0 ID=cds-PDP44288.1;Parent=gene-CLI86_04385;Dbxref=NCBI_GP:PDP44288.1;Name=PDP44288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225588.1;locus_tag=CLI86_04385;product=sugar kinase;protein_id=PDP44288.1;transl_table=11 NSLJ01000008.1 Genbank gene 58103 60028 . - . ID=gene-CLI86_04390;Name=CLI86_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04390 NSLJ01000008.1 Protein Homology CDS 58103 60028 . - 0 ID=cds-PDP44289.1;Parent=gene-CLI86_04390;Dbxref=NCBI_GP:PDP44289.1;Name=PDP44289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225587.1;locus_tag=CLI86_04390;product=heparinase;protein_id=PDP44289.1;transl_table=11 NSLJ01000008.1 Genbank gene 60065 61615 . - . ID=gene-CLI86_04395;Name=CLI86_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04395 NSLJ01000008.1 Protein Homology CDS 60065 61615 . - 0 ID=cds-PDP44290.1;Parent=gene-CLI86_04395;Dbxref=NCBI_GP:PDP44290.1;Name=PDP44290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225586.1;locus_tag=CLI86_04395;product=arylsulfatase;protein_id=PDP44290.1;transl_table=11 NSLJ01000008.1 Genbank gene 61612 62754 . - . ID=gene-CLI86_04400;Name=CLI86_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04400 NSLJ01000008.1 Protein Homology CDS 61612 62754 . - 0 ID=cds-PDP44333.1;Parent=gene-CLI86_04400;Dbxref=NCBI_GP:PDP44333.1;Name=PDP44333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225585.1;locus_tag=CLI86_04400;product=DUF4861 domain-containing protein;protein_id=PDP44333.1;transl_table=11 NSLJ01000008.1 Genbank gene 62768 63610 . - . ID=gene-CLI86_04405;Name=CLI86_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04405 NSLJ01000008.1 Protein Homology CDS 62768 63610 . - 0 ID=cds-PDP44291.1;Parent=gene-CLI86_04405;Dbxref=NCBI_GP:PDP44291.1;Name=PDP44291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018665715.1;locus_tag=CLI86_04405;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=PDP44291.1;transl_table=11 NSLJ01000008.1 Genbank gene 63809 65515 . - . ID=gene-CLI86_04410;Name=CLI86_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04410 NSLJ01000008.1 Protein Homology CDS 63809 65515 . - 0 ID=cds-PDP44292.1;Parent=gene-CLI86_04410;Dbxref=NCBI_GP:PDP44292.1;Name=PDP44292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019968354.1;locus_tag=CLI86_04410;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44292.1;transl_table=11 NSLJ01000008.1 Genbank gene 65527 68652 . - . ID=gene-CLI86_04415;Name=CLI86_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04415 NSLJ01000008.1 Protein Homology CDS 65527 68652 . - 0 ID=cds-PDP44293.1;Parent=gene-CLI86_04415;Dbxref=NCBI_GP:PDP44293.1;Name=PDP44293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225582.1;locus_tag=CLI86_04415;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44293.1;transl_table=11 NSLJ01000008.1 Genbank gene 68710 69927 . - . ID=gene-CLI86_04420;Name=CLI86_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04420 NSLJ01000008.1 Protein Homology CDS 68710 69927 . - 0 ID=cds-PDP44294.1;Parent=gene-CLI86_04420;Dbxref=NCBI_GP:PDP44294.1;Name=PDP44294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225581.1;locus_tag=CLI86_04420;product=glucuronyl hydrolase;protein_id=PDP44294.1;transl_table=11 NSLJ01000008.1 Genbank gene 70303 70689 . + . ID=gene-CLI86_04425;Name=CLI86_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04425 NSLJ01000008.1 Protein Homology CDS 70303 70689 . + 0 ID=cds-PDP44295.1;Parent=gene-CLI86_04425;Dbxref=NCBI_GP:PDP44295.1;Name=PDP44295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225580.1;locus_tag=CLI86_04425;product=diacylglycerol kinase;protein_id=PDP44295.1;transl_table=11 NSLJ01000008.1 Genbank gene 70839 71594 . + . ID=gene-CLI86_04430;Name=CLI86_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04430 NSLJ01000008.1 Protein Homology CDS 70839 71594 . + 0 ID=cds-PDP44296.1;Parent=gene-CLI86_04430;Dbxref=NCBI_GP:PDP44296.1;Name=PDP44296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225579.1;locus_tag=CLI86_04430;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=PDP44296.1;transl_table=11 NSLJ01000008.1 Genbank gene 71747 72850 . + . ID=gene-CLI86_04435;Name=CLI86_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04435 NSLJ01000008.1 Protein Homology CDS 71747 72850 . + 0 ID=cds-PDP44297.1;Parent=gene-CLI86_04435;Dbxref=NCBI_GP:PDP44297.1;Name=PDP44297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225578.1;locus_tag=CLI86_04435;product=transporter;protein_id=PDP44297.1;transl_table=11 NSLJ01000008.1 Genbank gene 72930 73406 . - . ID=gene-CLI86_04440;Name=CLI86_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04440 NSLJ01000008.1 Protein Homology CDS 72930 73406 . - 0 ID=cds-PDP44298.1;Parent=gene-CLI86_04440;Dbxref=NCBI_GP:PDP44298.1;Name=PDP44298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00210.22;locus_tag=CLI86_04440;product=DNA starvation/stationary phase protection protein;protein_id=PDP44298.1;transl_table=11 NSLJ01000008.1 Genbank gene 73535 74479 . + . ID=gene-CLI86_04445;Name=CLI86_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04445 NSLJ01000008.1 Protein Homology CDS 73535 74479 . + 0 ID=cds-PDP44299.1;Parent=gene-CLI86_04445;Dbxref=NCBI_GP:PDP44299.1;Name=PDP44299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225576.1;locus_tag=CLI86_04445;product=DNA-binding transcriptional regulator OxyR;protein_id=PDP44299.1;transl_table=11 NSLJ01000008.1 Genbank gene 74755 74916 . + . ID=gene-CLI86_04450;Name=CLI86_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04450 NSLJ01000008.1 Protein Homology CDS 74755 74916 . + 0 ID=cds-PDP44300.1;Parent=gene-CLI86_04450;Dbxref=NCBI_GP:PDP44300.1;Name=PDP44300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353445.1;locus_tag=CLI86_04450;product=rubredoxin;protein_id=PDP44300.1;transl_table=11 NSLJ01000008.1 Genbank gene 75146 75610 . - . ID=gene-CLI86_04455;Name=CLI86_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04455 NSLJ01000008.1 Protein Homology CDS 75146 75610 . - 0 ID=cds-PDP44334.1;Parent=gene-CLI86_04455;Dbxref=NCBI_GP:PDP44334.1;Name=PDP44334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008157711.1;locus_tag=CLI86_04455;product=hypothetical protein;protein_id=PDP44334.1;transl_table=11 NSLJ01000008.1 Genbank gene 75725 77485 . - . ID=gene-CLI86_04460;Name=CLI86_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04460 NSLJ01000008.1 Protein Homology CDS 75725 77485 . - 0 ID=cds-PDP44301.1;Parent=gene-CLI86_04460;Dbxref=NCBI_GP:PDP44301.1;Name=PDP44301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857300.1;locus_tag=CLI86_04460;product=dolichyl-phosphate-mannose--protein mannosyltransferase;protein_id=PDP44301.1;transl_table=11 NSLJ01000008.1 Genbank gene 77569 78669 . - . ID=gene-CLI86_04465;Name=CLI86_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04465 NSLJ01000008.1 Protein Homology CDS 77569 78669 . - 0 ID=cds-PDP44302.1;Parent=gene-CLI86_04465;Dbxref=NCBI_GP:PDP44302.1;Name=PDP44302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225571.1;locus_tag=CLI86_04465;product=YjgP/YjgQ family permease;protein_id=PDP44302.1;transl_table=11 NSLJ01000008.1 Genbank gene 78671 79801 . - . ID=gene-CLI86_04470;Name=CLI86_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04470 NSLJ01000008.1 Protein Homology CDS 78671 79801 . - 0 ID=cds-PDP44303.1;Parent=gene-CLI86_04470;Dbxref=NCBI_GP:PDP44303.1;Name=PDP44303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013616618.1;locus_tag=CLI86_04470;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=PDP44303.1;transl_table=11 NSLJ01000008.1 Genbank gene 80043 80882 . + . ID=gene-CLI86_04475;Name=CLI86_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04475 NSLJ01000008.1 Protein Homology CDS 80043 80882 . + 0 ID=cds-PDP44304.1;Parent=gene-CLI86_04475;Dbxref=NCBI_GP:PDP44304.1;Name=PDP44304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13847.4;locus_tag=CLI86_04475;product=class I SAM-dependent methyltransferase;protein_id=PDP44304.1;transl_table=11 NSLJ01000008.1 Genbank gene 81088 83214 . + . ID=gene-CLI86_04480;Name=CLI86_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04480 NSLJ01000008.1 Protein Homology CDS 81088 83214 . + 0 ID=cds-PDP44305.1;Parent=gene-CLI86_04480;Dbxref=NCBI_GP:PDP44305.1;Name=PDP44305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225568.1;locus_tag=CLI86_04480;product=alpha-glucosidase;protein_id=PDP44305.1;transl_table=11 NSLJ01000008.1 Genbank gene 83234 86278 . + . ID=gene-CLI86_04485;Name=CLI86_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04485 NSLJ01000008.1 Protein Homology CDS 83234 86278 . + 0 ID=cds-PDP44306.1;Parent=gene-CLI86_04485;Dbxref=NCBI_GP:PDP44306.1;Name=PDP44306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225567.1;locus_tag=CLI86_04485;product=SusC/RagA family protein;protein_id=PDP44306.1;transl_table=11 NSLJ01000008.1 Genbank gene 86303 87886 . + . ID=gene-CLI86_04490;Name=CLI86_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04490 NSLJ01000008.1 Protein Homology CDS 86303 87886 . + 0 ID=cds-PDP44307.1;Parent=gene-CLI86_04490;Dbxref=NCBI_GP:PDP44307.1;Name=PDP44307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225566.1;locus_tag=CLI86_04490;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP44307.1;transl_table=11 NSLJ01000008.1 Genbank gene 87936 89075 . + . ID=gene-CLI86_04495;Name=CLI86_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04495 NSLJ01000008.1 Protein Homology CDS 87936 89075 . + 0 ID=cds-PDP44308.1;Parent=gene-CLI86_04495;Dbxref=NCBI_GP:PDP44308.1;Name=PDP44308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14292.4;locus_tag=CLI86_04495;product=hypothetical protein;protein_id=PDP44308.1;transl_table=11 NSLJ01000008.1 Genbank gene 89106 90491 . + . ID=gene-CLI86_04500;Name=CLI86_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04500 NSLJ01000008.1 Protein Homology CDS 89106 90491 . + 0 ID=cds-PDP44309.1;Parent=gene-CLI86_04500;Dbxref=NCBI_GP:PDP44309.1;Name=PDP44309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17142.2;locus_tag=CLI86_04500;product=DUF5115 domain-containing protein;protein_id=PDP44309.1;transl_table=11 NSLJ01000008.1 Genbank gene 90804 90914 . + . ID=gene-CLI86_04505;Name=CLI86_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04505 NSLJ01000008.1 Protein Homology CDS 90804 90914 . + 0 ID=cds-PDP44335.1;Parent=gene-CLI86_04505;Dbxref=NCBI_GP:PDP44335.1;Name=PDP44335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013998331.1;locus_tag=CLI86_04505;product=HXXEE domain-containing protein;protein_id=PDP44335.1;transl_table=11 NSLJ01000008.1 Genbank pseudogene 91064 91432 . - . ID=gene-CLI86_04510;Name=CLI86_04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04510;pseudo=true NSLJ01000008.1 Protein Homology CDS 91064 91432 . - 0 ID=cds-CLI86_04510;Parent=gene-CLI86_04510;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014195069.1;locus_tag=CLI86_04510;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000008.1 Genbank gene 91356 92474 . - . ID=gene-CLI86_04515;Name=CLI86_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04515 NSLJ01000008.1 Protein Homology CDS 91356 92474 . - 0 ID=cds-PDP44310.1;Parent=gene-CLI86_04515;Dbxref=NCBI_GP:PDP44310.1;Name=PDP44310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225562.1;locus_tag=CLI86_04515;product=ABC transporter permease;protein_id=PDP44310.1;transl_table=11 NSLJ01000008.1 Genbank gene 92482 93588 . - . ID=gene-CLI86_04520;Name=CLI86_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04520 NSLJ01000008.1 Protein Homology CDS 92482 93588 . - 0 ID=cds-PDP44311.1;Parent=gene-CLI86_04520;Dbxref=NCBI_GP:PDP44311.1;Name=PDP44311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225561.1;locus_tag=CLI86_04520;product=ABC transporter permease;protein_id=PDP44311.1;transl_table=11 NSLJ01000008.1 Genbank gene 93596 94339 . - . ID=gene-CLI86_04525;Name=CLI86_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04525 NSLJ01000008.1 Protein Homology CDS 93596 94339 . - 0 ID=cds-PDP44312.1;Parent=gene-CLI86_04525;Dbxref=NCBI_GP:PDP44312.1;Name=PDP44312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009133498.1;locus_tag=CLI86_04525;product=ABC transporter ATP-binding protein;protein_id=PDP44312.1;transl_table=11 NSLJ01000008.1 Genbank gene 94336 95256 . - . ID=gene-CLI86_04530;Name=CLI86_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04530 NSLJ01000008.1 Protein Homology CDS 94336 95256 . - 0 ID=cds-PDP44313.1;Parent=gene-CLI86_04530;Dbxref=NCBI_GP:PDP44313.1;Name=PDP44313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225559.1;locus_tag=CLI86_04530;product=ABC transporter ATP-binding protein;protein_id=PDP44313.1;transl_table=11 NSLJ01000008.1 Genbank gene 95253 96188 . - . ID=gene-CLI86_04535;Name=CLI86_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04535 NSLJ01000008.1 Protein Homology CDS 95253 96188 . - 0 ID=cds-PDP44314.1;Parent=gene-CLI86_04535;Dbxref=NCBI_GP:PDP44314.1;Name=PDP44314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842498.1;locus_tag=CLI86_04535;product=hypothetical protein;protein_id=PDP44314.1;transl_table=11 NSLJ01000008.1 Genbank gene 96207 97469 . - . ID=gene-CLI86_04540;Name=CLI86_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04540 NSLJ01000008.1 Protein Homology CDS 96207 97469 . - 0 ID=cds-PDP44336.1;Parent=gene-CLI86_04540;Dbxref=NCBI_GP:PDP44336.1;Name=PDP44336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225557.1;locus_tag=CLI86_04540;product=TolC family protein;protein_id=PDP44336.1;transl_table=11 NSLJ01000008.1 Genbank gene 97586 98209 . - . ID=gene-CLI86_04545;Name=CLI86_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04545 NSLJ01000008.1 Protein Homology CDS 97586 98209 . - 0 ID=cds-PDP44315.1;Parent=gene-CLI86_04545;Dbxref=NCBI_GP:PDP44315.1;Name=PDP44315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=CLI86_04545;product=TetR/AcrR family transcriptional regulator;protein_id=PDP44315.1;transl_table=11 NSLJ01000008.1 Genbank gene 98360 99313 . - . ID=gene-CLI86_04550;Name=CLI86_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04550 NSLJ01000008.1 Protein Homology CDS 98360 99313 . - 0 ID=cds-PDP44316.1;Parent=gene-CLI86_04550;Dbxref=NCBI_GP:PDP44316.1;Name=PDP44316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225555.1;locus_tag=CLI86_04550;product=type I pantothenate kinase;protein_id=PDP44316.1;transl_table=11 NSLJ01000008.1 Genbank gene 99496 100455 . + . ID=gene-CLI86_04555;Name=CLI86_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04555 NSLJ01000008.1 Protein Homology CDS 99496 100455 . + 0 ID=cds-PDP44317.1;Parent=gene-CLI86_04555;Dbxref=NCBI_GP:PDP44317.1;Name=PDP44317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12849.5;locus_tag=CLI86_04555;product=phosphate ABC transporter substrate-binding protein;protein_id=PDP44317.1;transl_table=11 NSLJ01000008.1 Genbank gene 100581 101045 . - . ID=gene-CLI86_04560;Name=CLI86_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04560 NSLJ01000008.1 Protein Homology CDS 100581 101045 . - 0 ID=cds-PDP44318.1;Parent=gene-CLI86_04560;Dbxref=NCBI_GP:PDP44318.1;Name=PDP44318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225553.1;locus_tag=CLI86_04560;product=hypothetical protein;protein_id=PDP44318.1;transl_table=11 NSLJ01000008.1 Genbank gene 101052 102248 . - . ID=gene-CLI86_04565;Name=CLI86_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04565 NSLJ01000008.1 Protein Homology CDS 101052 102248 . - 0 ID=cds-PDP44319.1;Parent=gene-CLI86_04565;Dbxref=NCBI_GP:PDP44319.1;Name=PDP44319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654489.1;locus_tag=CLI86_04565;product=aminopeptidase;protein_id=PDP44319.1;transl_table=11 NSLJ01000008.1 Genbank pseudogene 102366 102506 . + . ID=gene-CLI86_04570;Name=CLI86_04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04570;pseudo=true NSLJ01000008.1 Protein Homology CDS 102366 102506 . + 0 ID=cds-CLI86_04570;Parent=gene-CLI86_04570;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358386.1;locus_tag=CLI86_04570;product=neutral zinc metallopeptidase;pseudo=true;transl_table=11 NSLJ01000008.1 Genbank gene 102581 103501 . + . ID=gene-CLI86_04575;Name=CLI86_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04575 NSLJ01000008.1 Protein Homology CDS 102581 103501 . + 0 ID=cds-PDP44320.1;Parent=gene-CLI86_04575;Dbxref=NCBI_GP:PDP44320.1;Name=PDP44320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225550.1;locus_tag=CLI86_04575;product=ribokinase;protein_id=PDP44320.1;transl_table=11 NSLJ01000008.1 Genbank gene 103731 104093 . - . ID=gene-CLI86_04580;Name=CLI86_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04580 NSLJ01000008.1 Protein Homology CDS 103731 104093 . - 0 ID=cds-PDP44337.1;Parent=gene-CLI86_04580;Dbxref=NCBI_GP:PDP44337.1;Name=PDP44337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008656505.1;locus_tag=CLI86_04580;product=XRE family transcriptional regulator;protein_id=PDP44337.1;transl_table=11 NSLJ01000008.1 Genbank pseudogene 104108 104406 . - . ID=gene-CLI86_04585;Name=CLI86_04585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04585;pseudo=true NSLJ01000008.1 Protein Homology CDS 104108 104406 . - 0 ID=cds-CLI86_04585;Parent=gene-CLI86_04585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008666890.1;locus_tag=CLI86_04585;product=addiction module toxin RelE;pseudo=true;transl_table=11 NSLJ01000008.1 Genbank gene 104674 104751 . - . ID=gene-CLI86_04590;Name=CLI86_04590;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_04590 NSLJ01000008.1 tRNAscan-SE tRNA 104674 104751 . - . ID=rna-CLI86_04590;Parent=gene-CLI86_04590;anticodon=(pos:complement(104714..104716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_04590;product=tRNA-Pro NSLJ01000008.1 tRNAscan-SE exon 104674 104751 . - . ID=exon-CLI86_04590-1;Parent=rna-CLI86_04590;anticodon=(pos:complement(104714..104716));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_04590;product=tRNA-Pro NSLJ01000008.1 Genbank gene 104881 105828 . + . ID=gene-CLI86_04595;Name=CLI86_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04595 NSLJ01000008.1 Protein Homology CDS 104881 105828 . + 0 ID=cds-PDP44338.1;Parent=gene-CLI86_04595;Dbxref=NCBI_GP:PDP44338.1;Name=PDP44338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225545.1;locus_tag=CLI86_04595;product=NAD-dependent epimerase/dehydratase family protein;protein_id=PDP44338.1;transl_table=11 NSLJ01000008.1 Genbank gene 105977 108763 . - . ID=gene-CLI86_04600;Name=CLI86_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04600 NSLJ01000008.1 Protein Homology CDS 105977 108763 . - 0 ID=cds-PDP44321.1;Parent=gene-CLI86_04600;Dbxref=NCBI_GP:PDP44321.1;Name=PDP44321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225544.1;locus_tag=CLI86_04600;product=TonB-dependent receptor;protein_id=PDP44321.1;transl_table=11 NSLJ01000008.1 Genbank gene 109114 109830 . + . ID=gene-CLI86_04605;Name=CLI86_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04605 NSLJ01000008.1 Protein Homology CDS 109114 109830 . + 0 ID=cds-PDP44322.1;Parent=gene-CLI86_04605;Dbxref=NCBI_GP:PDP44322.1;Name=PDP44322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=CLI86_04605;product=DNA-binding response regulator;protein_id=PDP44322.1;transl_table=11 NSLJ01000008.1 Genbank gene 109968 111920 . + . ID=gene-CLI86_04610;Name=CLI86_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04610 NSLJ01000008.1 Protein Homology CDS 109968 111920 . + 0 ID=cds-PDP44323.1;Parent=gene-CLI86_04610;Dbxref=NCBI_GP:PDP44323.1;Name=PDP44323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225542.1;locus_tag=CLI86_04610;product=hypothetical protein;protein_id=PDP44323.1;transl_table=11 NSLJ01000008.1 Genbank gene 111925 113286 . + . ID=gene-CLI86_04615;Name=CLI86_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04615 NSLJ01000008.1 Protein Homology CDS 111925 113286 . + 0 ID=cds-PDP44324.1;Parent=gene-CLI86_04615;Dbxref=NCBI_GP:PDP44324.1;Name=PDP44324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277163.1;locus_tag=CLI86_04615;product=radical SAM protein;protein_id=PDP44324.1;transl_table=11 NSLJ01000008.1 Genbank gene 113304 113519 . + . ID=gene-CLI86_04620;Name=CLI86_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04620 NSLJ01000008.1 GeneMarkS+ CDS 113304 113519 . + 0 ID=cds-PDP44325.1;Parent=gene-CLI86_04620;Dbxref=NCBI_GP:PDP44325.1;Name=PDP44325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04620;product=hypothetical protein;protein_id=PDP44325.1;transl_table=11 NSLJ01000008.1 Genbank gene 113698 115992 . + . ID=gene-CLI86_04625;Name=CLI86_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04625 NSLJ01000008.1 Protein Homology CDS 113698 115992 . + 0 ID=cds-PDP44326.1;Parent=gene-CLI86_04625;Dbxref=NCBI_GP:PDP44326.1;Name=PDP44326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13715.4;locus_tag=CLI86_04625;product=hypothetical protein;protein_id=PDP44326.1;transl_table=11 NSLJ01000008.1 Genbank gene 116040 118066 . + . ID=gene-CLI86_04630;Name=CLI86_04630;end_range=118066,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04630;partial=true NSLJ01000008.1 Protein Homology CDS 116040 118066 . + 0 ID=cds-PDP44327.1;Parent=gene-CLI86_04630;Dbxref=NCBI_GP:PDP44327.1;Name=PDP44327.1;end_range=118066,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13620.4;locus_tag=CLI86_04630;partial=true;product=hypothetical protein;protein_id=PDP44327.1;transl_table=11 ##sequence-region NSLJ01000090.1 1 1029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000090.1 Genbank region 1 1029 . + . ID=NSLJ01000090.1:1..1029;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 ##sequence-region NSLJ01000091.1 1 982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000091.1 Genbank region 1 982 . + . ID=NSLJ01000091.1:1..982;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000091.1 Genbank gene 1 466 . - . ID=gene-CLI86_13845;Name=CLI86_13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13845;partial=true;start_range=.,1 NSLJ01000091.1 Protein Homology CDS 1 466 . - 0 ID=cds-PDP40794.1;Parent=gene-CLI86_13845;Dbxref=NCBI_GP:PDP40794.1;Name=PDP40794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223559.1;locus_tag=CLI86_13845;partial=true;product=6-bladed beta-propeller;protein_id=PDP40794.1;start_range=.,1;transl_table=11 NSLJ01000091.1 Genbank gene 570 818 . - . ID=gene-CLI86_13850;Name=CLI86_13850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13850 NSLJ01000091.1 Protein Homology CDS 570 818 . - 0 ID=cds-PDP40795.1;Parent=gene-CLI86_13850;Dbxref=NCBI_GP:PDP40795.1;Name=PDP40795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005791817.1;locus_tag=CLI86_13850;product=rSAM-modified peptide;protein_id=PDP40795.1;transl_table=11 ##sequence-region NSLJ01000092.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000092.1 Genbank region 1 968 . + . ID=NSLJ01000092.1:1..968;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000092.1 Genbank gene 1 251 . + . ID=gene-CLI86_13855;Name=CLI86_13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13855;partial=true;start_range=.,1 NSLJ01000092.1 Protein Homology CDS 1 251 . + 2 ID=cds-PDP40764.1;Parent=gene-CLI86_13855;Dbxref=NCBI_GP:PDP40764.1;Name=PDP40764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226179.1;locus_tag=CLI86_13855;partial=true;product=hypothetical protein;protein_id=PDP40764.1;start_range=.,1;transl_table=11 NSLJ01000092.1 Genbank gene 268 968 . + . ID=gene-CLI86_13860;Name=CLI86_13860;end_range=968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13860;partial=true NSLJ01000092.1 Protein Homology CDS 268 968 . + 0 ID=cds-PDP40765.1;Parent=gene-CLI86_13860;Dbxref=NCBI_GP:PDP40765.1;Name=PDP40765.1;end_range=968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226173.1;locus_tag=CLI86_13860;partial=true;product=hypothetical protein;protein_id=PDP40765.1;transl_table=11 ##sequence-region NSLJ01000093.1 1 903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000093.1 Genbank region 1 903 . + . ID=NSLJ01000093.1:1..903;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000093.1 Genbank pseudogene 1 653 . + . ID=gene-CLI86_13865;Name=CLI86_13865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_13865;pseudo=true NSLJ01000093.1 Protein Homology CDS 1 653 . + 0 ID=cds-CLI86_13865;Parent=gene-CLI86_13865;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223815.1;locus_tag=CLI86_13865;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLJ01000094.1 1 900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000094.1 Genbank region 1 900 . + . ID=NSLJ01000094.1:1..900;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000094.1 Genbank gene 75 887 . - . ID=gene-CLI86_13870;Name=CLI86_13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13870 NSLJ01000094.1 Protein Homology CDS 75 887 . - 0 ID=cds-PDP40736.1;Parent=gene-CLI86_13870;Dbxref=NCBI_GP:PDP40736.1;Name=PDP40736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01609.19;locus_tag=CLI86_13870;product=hypothetical protein;protein_id=PDP40736.1;transl_table=11 ##sequence-region NSLJ01000095.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000095.1 Genbank region 1 892 . + . ID=NSLJ01000095.1:1..892;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000095.1 Genbank gene 69 892 . + . ID=gene-CLI86_13875;Name=CLI86_13875;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13875;partial=true NSLJ01000095.1 Protein Homology CDS 69 892 . + 0 ID=cds-PDP40713.1;Parent=gene-CLI86_13875;Dbxref=NCBI_GP:PDP40713.1;Name=PDP40713.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224885.1;locus_tag=CLI86_13875;partial=true;product=ISL3 family transposase;protein_id=PDP40713.1;transl_table=11 ##sequence-region NSLJ01000096.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000096.1 Genbank region 1 821 . + . ID=NSLJ01000096.1:1..821;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000096.1 Genbank gene 219 821 . + . ID=gene-CLI86_13880;Name=CLI86_13880;end_range=821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13880;partial=true NSLJ01000096.1 Protein Homology CDS 219 821 . + 0 ID=cds-PDP40688.1;Parent=gene-CLI86_13880;Dbxref=NCBI_GP:PDP40688.1;Name=PDP40688.1;end_range=821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956459.1;locus_tag=CLI86_13880;partial=true;product=hemagglutinin;protein_id=PDP40688.1;transl_table=11 ##sequence-region NSLJ01000097.1 1 800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000097.1 Genbank region 1 800 . + . ID=NSLJ01000097.1:1..800;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000097.1 Genbank gene 1 800 . - . ID=gene-CLI86_13885;Name=CLI86_13885;end_range=800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13885;partial=true;start_range=.,1 NSLJ01000097.1 Protein Homology CDS 1 800 . - 0 ID=cds-PDP40667.1;Parent=gene-CLI86_13885;Dbxref=NCBI_GP:PDP40667.1;Name=PDP40667.1;end_range=800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223556.1;locus_tag=CLI86_13885;partial=true;product=6-bladed beta-propeller;protein_id=PDP40667.1;start_range=.,1;transl_table=11 ##sequence-region NSLJ01000098.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000098.1 Genbank region 1 744 . + . ID=NSLJ01000098.1:1..744;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000098.1 Genbank gene 12 744 . + . ID=gene-CLI86_13890;Name=lepB;end_range=744,.;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI86_13890;partial=true NSLJ01000098.1 Protein Homology CDS 12 744 . + 0 ID=cds-PDP40666.1;Parent=gene-CLI86_13890;Dbxref=NCBI_GP:PDP40666.1;Name=PDP40666.1;end_range=744,.;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223832.1;locus_tag=CLI86_13890;partial=true;product=signal peptidase I;protein_id=PDP40666.1;transl_table=11 ##sequence-region NSLJ01000099.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000099.1 Genbank region 1 737 . + . ID=NSLJ01000099.1:1..737;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000099.1 Genbank gene 55 737 . + . ID=gene-CLI86_13895;Name=CLI86_13895;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_13895;partial=true NSLJ01000099.1 Protein Homology CDS 55 737 . + 0 ID=cds-PDP40647.1;Parent=gene-CLI86_13895;Dbxref=NCBI_GP:PDP40647.1;Name=PDP40647.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225861.1;locus_tag=CLI86_13895;partial=true;product=hypothetical protein;protein_id=PDP40647.1;transl_table=11 ##sequence-region NSLJ01000009.1 1 113904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=28112 NSLJ01000009.1 Genbank region 1 113904 . + . ID=NSLJ01000009.1:1..113904;Dbxref=taxon:28112;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW11663 NSLJ01000009.1 Genbank gene 122 307 . - . ID=gene-CLI86_04635;Name=CLI86_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04635 NSLJ01000009.1 Protein Homology CDS 122 307 . - 0 ID=cds-PDP44144.1;Parent=gene-CLI86_04635;Dbxref=NCBI_GP:PDP44144.1;Name=PDP44144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225172.1;locus_tag=CLI86_04635;product=hypothetical protein;protein_id=PDP44144.1;transl_table=11 NSLJ01000009.1 Genbank gene 529 1359 . + . ID=gene-CLI86_04640;Name=CLI86_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04640 NSLJ01000009.1 Protein Homology CDS 529 1359 . + 0 ID=cds-PDP44145.1;Parent=gene-CLI86_04640;Dbxref=NCBI_GP:PDP44145.1;Name=PDP44145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225401.1;locus_tag=CLI86_04640;product=GLPGLI family protein;protein_id=PDP44145.1;transl_table=11 NSLJ01000009.1 Genbank gene 1359 1721 . + . ID=gene-CLI86_04645;Name=CLI86_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04645 NSLJ01000009.1 Protein Homology CDS 1359 1721 . + 0 ID=cds-PDP44146.1;Parent=gene-CLI86_04645;Dbxref=NCBI_GP:PDP44146.1;Name=PDP44146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225402.1;locus_tag=CLI86_04645;product=hypothetical protein;protein_id=PDP44146.1;transl_table=11 NSLJ01000009.1 Genbank gene 1810 2667 . + . ID=gene-CLI86_04650;Name=CLI86_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04650 NSLJ01000009.1 Protein Homology CDS 1810 2667 . + 0 ID=cds-PDP44147.1;Parent=gene-CLI86_04650;Dbxref=NCBI_GP:PDP44147.1;Name=PDP44147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225403.1;locus_tag=CLI86_04650;product=GLPGLI family protein;protein_id=PDP44147.1;transl_table=11 NSLJ01000009.1 Genbank gene 2673 5300 . + . ID=gene-CLI86_04655;Name=CLI86_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04655 NSLJ01000009.1 Protein Homology CDS 2673 5300 . + 0 ID=cds-PDP44148.1;Parent=gene-CLI86_04655;Dbxref=NCBI_GP:PDP44148.1;Name=PDP44148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13620.4;locus_tag=CLI86_04655;product=hypothetical protein;protein_id=PDP44148.1;transl_table=11 NSLJ01000009.1 Genbank gene 5304 6578 . - . ID=gene-CLI86_04660;Name=CLI86_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04660 NSLJ01000009.1 Protein Homology CDS 5304 6578 . - 0 ID=cds-PDP44149.1;Parent=gene-CLI86_04660;Dbxref=NCBI_GP:PDP44149.1;Name=PDP44149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225406.1;locus_tag=CLI86_04660;product=DUF1343 domain-containing protein;protein_id=PDP44149.1;transl_table=11 NSLJ01000009.1 Genbank gene 6604 6858 . + . ID=gene-CLI86_04665;Name=CLI86_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04665 NSLJ01000009.1 GeneMarkS+ CDS 6604 6858 . + 0 ID=cds-PDP44150.1;Parent=gene-CLI86_04665;Dbxref=NCBI_GP:PDP44150.1;Name=PDP44150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04665;product=hypothetical protein;protein_id=PDP44150.1;transl_table=11 NSLJ01000009.1 Genbank gene 7050 7505 . + . ID=gene-CLI86_04670;Name=CLI86_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04670 NSLJ01000009.1 Protein Homology CDS 7050 7505 . + 0 ID=cds-PDP44151.1;Parent=gene-CLI86_04670;Dbxref=NCBI_GP:PDP44151.1;Name=PDP44151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101289.1;locus_tag=CLI86_04670;product=50S ribosomal protein L13;protein_id=PDP44151.1;transl_table=11 NSLJ01000009.1 Genbank gene 7511 7897 . + . ID=gene-CLI86_04675;Name=CLI86_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04675 NSLJ01000009.1 Protein Homology CDS 7511 7897 . + 0 ID=cds-PDP44152.1;Parent=gene-CLI86_04675;Dbxref=NCBI_GP:PDP44152.1;Name=PDP44152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101288.1;locus_tag=CLI86_04675;product=30S ribosomal protein S9;protein_id=PDP44152.1;transl_table=11 NSLJ01000009.1 Genbank gene 8039 8899 . + . ID=gene-CLI86_04680;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CLI86_04680 NSLJ01000009.1 Protein Homology CDS 8039 8899 . + 0 ID=cds-PDP44153.1;Parent=gene-CLI86_04680;Dbxref=NCBI_GP:PDP44153.1;Name=PDP44153.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225409.1;locus_tag=CLI86_04680;product=30S ribosomal protein S2;protein_id=PDP44153.1;transl_table=11 NSLJ01000009.1 Genbank gene 8921 9745 . + . ID=gene-CLI86_04685;Name=CLI86_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04685 NSLJ01000009.1 Protein Homology CDS 8921 9745 . + 0 ID=cds-PDP44154.1;Parent=gene-CLI86_04685;Dbxref=NCBI_GP:PDP44154.1;Name=PDP44154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006801471.1;locus_tag=CLI86_04685;product=elongation factor Ts;protein_id=PDP44154.1;transl_table=11 NSLJ01000009.1 Genbank gene 9880 10755 . + . ID=gene-CLI86_04690;Name=CLI86_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04690 NSLJ01000009.1 Protein Homology CDS 9880 10755 . + 0 ID=cds-PDP44155.1;Parent=gene-CLI86_04690;Dbxref=NCBI_GP:PDP44155.1;Name=PDP44155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844013.1;locus_tag=CLI86_04690;product=ABC transporter ATP-binding protein;protein_id=PDP44155.1;transl_table=11 NSLJ01000009.1 Genbank gene 10762 11436 . + . ID=gene-CLI86_04695;Name=CLI86_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04695 NSLJ01000009.1 Protein Homology CDS 10762 11436 . + 0 ID=cds-PDP44156.1;Parent=gene-CLI86_04695;Dbxref=NCBI_GP:PDP44156.1;Name=PDP44156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225412.1;locus_tag=CLI86_04695;product=hypothetical protein;protein_id=PDP44156.1;transl_table=11 NSLJ01000009.1 Genbank gene 11460 12683 . + . ID=gene-CLI86_04700;Name=CLI86_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04700 NSLJ01000009.1 Protein Homology CDS 11460 12683 . + 0 ID=cds-PDP44157.1;Parent=gene-CLI86_04700;Dbxref=NCBI_GP:PDP44157.1;Name=PDP44157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225413.1;locus_tag=CLI86_04700;product=DUF4857 domain-containing protein;protein_id=PDP44157.1;transl_table=11 NSLJ01000009.1 Genbank gene 12712 13257 . + . ID=gene-CLI86_04705;Name=CLI86_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04705 NSLJ01000009.1 Protein Homology CDS 12712 13257 . + 0 ID=cds-PDP44158.1;Parent=gene-CLI86_04705;Dbxref=NCBI_GP:PDP44158.1;Name=PDP44158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844010.1;locus_tag=CLI86_04705;product=hypothetical protein;protein_id=PDP44158.1;transl_table=11 NSLJ01000009.1 Genbank gene 13260 13829 . + . ID=gene-CLI86_04710;Name=CLI86_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04710 NSLJ01000009.1 Protein Homology CDS 13260 13829 . + 0 ID=cds-PDP44159.1;Parent=gene-CLI86_04710;Dbxref=NCBI_GP:PDP44159.1;Name=PDP44159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225415.1;locus_tag=CLI86_04710;product=peptidase;protein_id=PDP44159.1;transl_table=11 NSLJ01000009.1 Genbank pseudogene 13981 14453 . - . ID=gene-CLI86_04715;Name=CLI86_04715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_04715;pseudo=true NSLJ01000009.1 Protein Homology CDS 13981 14453 . - 0 ID=cds-CLI86_04715;Parent=gene-CLI86_04715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225416.1;locus_tag=CLI86_04715;product=hypothetical protein;pseudo=true;transl_table=11 NSLJ01000009.1 Genbank gene 14481 15377 . - . ID=gene-CLI86_04720;Name=CLI86_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04720 NSLJ01000009.1 Protein Homology CDS 14481 15377 . - 0 ID=cds-PDP44160.1;Parent=gene-CLI86_04720;Dbxref=NCBI_GP:PDP44160.1;Name=PDP44160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225417.1;locus_tag=CLI86_04720;product=hypothetical protein;protein_id=PDP44160.1;transl_table=11 NSLJ01000009.1 Genbank gene 15777 16967 . - . ID=gene-CLI86_04725;Name=CLI86_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04725 NSLJ01000009.1 Protein Homology CDS 15777 16967 . - 0 ID=cds-PDP44161.1;Parent=gene-CLI86_04725;Dbxref=NCBI_GP:PDP44161.1;Name=PDP44161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14322.4;locus_tag=CLI86_04725;product=hypothetical protein;protein_id=PDP44161.1;transl_table=11 NSLJ01000009.1 Genbank gene 16980 18620 . - . ID=gene-CLI86_04730;Name=CLI86_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04730 NSLJ01000009.1 Protein Homology CDS 16980 18620 . - 0 ID=cds-PDP44162.1;Parent=gene-CLI86_04730;Dbxref=NCBI_GP:PDP44162.1;Name=PDP44162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04056;locus_tag=CLI86_04730;product=hypothetical protein;protein_id=PDP44162.1;transl_table=11 NSLJ01000009.1 Genbank gene 18613 19295 . - . ID=gene-CLI86_04735;Name=CLI86_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04735 NSLJ01000009.1 Protein Homology CDS 18968 19295 . - 0 ID=cds-PDP44227.1;Parent=gene-CLI86_04735;Dbxref=NCBI_GP:PDP44227.1;Name=PDP44227.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_04735;product=IS1 family transposase;protein_id=PDP44227.1;transl_table=11 NSLJ01000009.1 Protein Homology CDS 18613 18968 . - 2 ID=cds-PDP44227.1;Parent=gene-CLI86_04735;Dbxref=NCBI_GP:PDP44227.1;Name=PDP44227.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611661.1;locus_tag=CLI86_04735;product=IS1 family transposase;protein_id=PDP44227.1;transl_table=11 NSLJ01000009.1 Genbank gene 19450 22518 . - . ID=gene-CLI86_04740;Name=CLI86_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04740 NSLJ01000009.1 Protein Homology CDS 19450 22518 . - 0 ID=cds-PDP44163.1;Parent=gene-CLI86_04740;Dbxref=NCBI_GP:PDP44163.1;Name=PDP44163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224442.1;locus_tag=CLI86_04740;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP44163.1;transl_table=11 NSLJ01000009.1 Genbank gene 22710 24428 . - . ID=gene-CLI86_04745;Name=CLI86_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04745 NSLJ01000009.1 Protein Homology CDS 22710 24428 . - 0 ID=cds-PDP44164.1;Parent=gene-CLI86_04745;Dbxref=NCBI_GP:PDP44164.1;Name=PDP44164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005855072.1;locus_tag=CLI86_04745;product=FAD-dependent oxidoreductase;protein_id=PDP44164.1;transl_table=11 NSLJ01000009.1 Genbank gene 24442 25845 . - . ID=gene-CLI86_04750;Name=CLI86_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04750 NSLJ01000009.1 Protein Homology CDS 24442 25845 . - 0 ID=cds-PDP44165.1;Parent=gene-CLI86_04750;Dbxref=NCBI_GP:PDP44165.1;Name=PDP44165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809349.1;locus_tag=CLI86_04750;product=MFS transporter;protein_id=PDP44165.1;transl_table=11 NSLJ01000009.1 Genbank gene 25849 26958 . - . ID=gene-CLI86_04755;Name=CLI86_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04755 NSLJ01000009.1 Protein Homology CDS 25849 26958 . - 0 ID=cds-PDP44166.1;Parent=gene-CLI86_04755;Dbxref=NCBI_GP:PDP44166.1;Name=PDP44166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224445.1;locus_tag=CLI86_04755;product=DUF4434 domain-containing protein;protein_id=PDP44166.1;transl_table=11 NSLJ01000009.1 Genbank gene 27486 27944 . - . ID=gene-CLI86_04760;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CLI86_04760 NSLJ01000009.1 Protein Homology CDS 27486 27944 . - 0 ID=cds-PDP44167.1;Parent=gene-CLI86_04760;Dbxref=NCBI_GP:PDP44167.1;Name=PDP44167.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224446.1;locus_tag=CLI86_04760;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=PDP44167.1;transl_table=11 NSLJ01000009.1 Genbank gene 27938 30073 . - . ID=gene-CLI86_04765;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CLI86_04765 NSLJ01000009.1 Protein Homology CDS 27938 30073 . - 0 ID=cds-PDP44168.1;Parent=gene-CLI86_04765;Dbxref=NCBI_GP:PDP44168.1;Name=PDP44168.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224447.1;locus_tag=CLI86_04765;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=PDP44168.1;transl_table=11 NSLJ01000009.1 cmsearch riboswitch 30148 30357 . - . ID=id-NSLJ01000009.1:30148..30357;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLJ01000009.1 Genbank gene 30502 30903 . - . ID=gene-CLI86_04770;Name=CLI86_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04770 NSLJ01000009.1 Protein Homology CDS 30502 30903 . - 0 ID=cds-PDP44169.1;Parent=gene-CLI86_04770;Dbxref=NCBI_GP:PDP44169.1;Name=PDP44169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224448.1;locus_tag=CLI86_04770;product=HIT family protein;protein_id=PDP44169.1;transl_table=11 NSLJ01000009.1 Genbank gene 30917 31387 . - . ID=gene-CLI86_04775;Name=CLI86_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04775 NSLJ01000009.1 Protein Homology CDS 30917 31387 . - 0 ID=cds-PDP44170.1;Parent=gene-CLI86_04775;Dbxref=NCBI_GP:PDP44170.1;Name=PDP44170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147156.1;locus_tag=CLI86_04775;product=transcription elongation factor GreA;protein_id=PDP44170.1;transl_table=11 NSLJ01000009.1 Genbank gene 31579 32739 . - . ID=gene-CLI86_04780;Name=CLI86_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04780 NSLJ01000009.1 Protein Homology CDS 31579 32739 . - 0 ID=cds-PDP44228.1;Parent=gene-CLI86_04780;Dbxref=NCBI_GP:PDP44228.1;Name=PDP44228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224450.1;locus_tag=CLI86_04780;product=hypothetical protein;protein_id=PDP44228.1;transl_table=11 NSLJ01000009.1 Genbank gene 32834 33466 . + . ID=gene-CLI86_04785;Name=CLI86_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04785 NSLJ01000009.1 Protein Homology CDS 32834 33466 . + 0 ID=cds-PDP44171.1;Parent=gene-CLI86_04785;Dbxref=NCBI_GP:PDP44171.1;Name=PDP44171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016778575.1;locus_tag=CLI86_04785;product=SIS domain-containing protein;protein_id=PDP44171.1;transl_table=11 NSLJ01000009.1 Genbank gene 33454 34380 . + . ID=gene-CLI86_04790;Name=CLI86_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04790 NSLJ01000009.1 Protein Homology CDS 33454 34380 . + 0 ID=cds-PDP44172.1;Parent=gene-CLI86_04790;Dbxref=NCBI_GP:PDP44172.1;Name=PDP44172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224452.1;locus_tag=CLI86_04790;product=carbohydrate kinase;protein_id=PDP44172.1;transl_table=11 NSLJ01000009.1 Genbank gene 34412 37228 . - . ID=gene-CLI86_04795;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CLI86_04795 NSLJ01000009.1 Protein Homology CDS 34412 37228 . - 0 ID=cds-PDP44173.1;Parent=gene-CLI86_04795;Dbxref=NCBI_GP:PDP44173.1;Name=PDP44173.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224453.1;locus_tag=CLI86_04795;product=excinuclease ABC subunit A;protein_id=PDP44173.1;transl_table=11 NSLJ01000009.1 Genbank gene 37298 38767 . - . ID=gene-CLI86_04800;Name=CLI86_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04800 NSLJ01000009.1 Protein Homology CDS 37298 38767 . - 0 ID=cds-PDP44174.1;Parent=gene-CLI86_04800;Dbxref=NCBI_GP:PDP44174.1;Name=PDP44174.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966905.1;locus_tag=CLI86_04800;product=cytosol nonspecific dipeptidase;protein_id=PDP44174.1;transl_table=11 NSLJ01000009.1 Genbank gene 39037 41262 . + . ID=gene-CLI86_04805;Name=CLI86_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04805 NSLJ01000009.1 Protein Homology CDS 39037 41262 . + 0 ID=cds-PDP44229.1;Parent=gene-CLI86_04805;Dbxref=NCBI_GP:PDP44229.1;Name=PDP44229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860748.1;locus_tag=CLI86_04805;product=polyribonucleotide nucleotidyltransferase;protein_id=PDP44229.1;transl_table=11 NSLJ01000009.1 Genbank gene 41426 43888 . - . ID=gene-CLI86_04810;Name=CLI86_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04810 NSLJ01000009.1 Protein Homology CDS 41426 43888 . - 0 ID=cds-PDP44175.1;Parent=gene-CLI86_04810;Dbxref=NCBI_GP:PDP44175.1;Name=PDP44175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224457.1;locus_tag=CLI86_04810;product=hypothetical protein;protein_id=PDP44175.1;transl_table=11 NSLJ01000009.1 Genbank gene 43931 44698 . - . ID=gene-CLI86_04815;Name=CLI86_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04815 NSLJ01000009.1 Protein Homology CDS 43931 44698 . - 0 ID=cds-PDP44176.1;Parent=gene-CLI86_04815;Dbxref=NCBI_GP:PDP44176.1;Name=PDP44176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224458.1;locus_tag=CLI86_04815;product=glycosyltransferase;protein_id=PDP44176.1;transl_table=11 NSLJ01000009.1 Genbank gene 44702 45964 . - . ID=gene-CLI86_04820;Name=CLI86_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04820 NSLJ01000009.1 Protein Homology CDS 44702 45964 . - 0 ID=cds-PDP44177.1;Parent=gene-CLI86_04820;Dbxref=NCBI_GP:PDP44177.1;Name=PDP44177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224459.1;locus_tag=CLI86_04820;product=glycosyl transferase;protein_id=PDP44177.1;transl_table=11 NSLJ01000009.1 Genbank gene 45966 46685 . - . ID=gene-CLI86_04825;Name=CLI86_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04825 NSLJ01000009.1 Protein Homology CDS 45966 46685 . - 0 ID=cds-PDP44178.1;Parent=gene-CLI86_04825;Dbxref=NCBI_GP:PDP44178.1;Name=PDP44178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13489.4;locus_tag=CLI86_04825;product=class I SAM-dependent methyltransferase;protein_id=PDP44178.1;transl_table=11 NSLJ01000009.1 Genbank gene 46682 47890 . - . ID=gene-CLI86_04830;Name=CLI86_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04830 NSLJ01000009.1 Protein Homology CDS 46682 47890 . - 0 ID=cds-PDP44179.1;Parent=gene-CLI86_04830;Dbxref=NCBI_GP:PDP44179.1;Name=PDP44179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010535745.1;locus_tag=CLI86_04830;product=glycosyl transferase;protein_id=PDP44179.1;transl_table=11 NSLJ01000009.1 Genbank gene 47894 49051 . - . ID=gene-CLI86_04835;Name=CLI86_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04835 NSLJ01000009.1 Protein Homology CDS 47894 49051 . - 0 ID=cds-PDP44230.1;Parent=gene-CLI86_04835;Dbxref=NCBI_GP:PDP44230.1;Name=PDP44230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931023.1;locus_tag=CLI86_04835;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=PDP44230.1;transl_table=11 NSLJ01000009.1 Genbank gene 49056 50261 . - . ID=gene-CLI86_04840;Name=CLI86_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04840 NSLJ01000009.1 Protein Homology CDS 49056 50261 . - 0 ID=cds-PDP44180.1;Parent=gene-CLI86_04840;Dbxref=NCBI_GP:PDP44180.1;Name=PDP44180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224466.1;locus_tag=CLI86_04840;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=PDP44180.1;transl_table=11 NSLJ01000009.1 Genbank gene 50465 51586 . - . ID=gene-CLI86_04845;Name=CLI86_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04845 NSLJ01000009.1 Protein Homology CDS 50465 51586 . - 0 ID=cds-PDP44181.1;Parent=gene-CLI86_04845;Dbxref=NCBI_GP:PDP44181.1;Name=PDP44181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224467.1;locus_tag=CLI86_04845;product=Fic family protein;protein_id=PDP44181.1;transl_table=11 NSLJ01000009.1 Genbank gene 51965 53314 . - . ID=gene-CLI86_04850;Name=CLI86_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04850 NSLJ01000009.1 Protein Homology CDS 51965 53314 . - 0 ID=cds-PDP44182.1;Parent=gene-CLI86_04850;Dbxref=NCBI_GP:PDP44182.1;Name=PDP44182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224470.1;locus_tag=CLI86_04850;product=AAA family ATPase;protein_id=PDP44182.1;transl_table=11 NSLJ01000009.1 Genbank gene 53518 55335 . - . ID=gene-CLI86_04855;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CLI86_04855 NSLJ01000009.1 Protein Homology CDS 53518 55335 . - 0 ID=cds-PDP44183.1;Parent=gene-CLI86_04855;Dbxref=NCBI_GP:PDP44183.1;Name=PDP44183.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007939078.1;locus_tag=CLI86_04855;product=asparagine synthase (glutamine-hydrolyzing);protein_id=PDP44183.1;transl_table=11 NSLJ01000009.1 Genbank gene 55340 56434 . - . ID=gene-CLI86_04860;Name=CLI86_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04860 NSLJ01000009.1 GeneMarkS+ CDS 55340 56434 . - 0 ID=cds-PDP44184.1;Parent=gene-CLI86_04860;Dbxref=NCBI_GP:PDP44184.1;Name=PDP44184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04860;product=hypothetical protein;protein_id=PDP44184.1;transl_table=11 NSLJ01000009.1 Genbank gene 56502 57005 . - . ID=gene-CLI86_04865;Name=CLI86_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04865 NSLJ01000009.1 Protein Homology CDS 56502 57005 . - 0 ID=cds-PDP44185.1;Parent=gene-CLI86_04865;Dbxref=NCBI_GP:PDP44185.1;Name=PDP44185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13489.4;locus_tag=CLI86_04865;product=hypothetical protein;protein_id=PDP44185.1;transl_table=11 NSLJ01000009.1 Genbank gene 56992 57264 . - . ID=gene-CLI86_04870;Name=CLI86_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04870 NSLJ01000009.1 GeneMarkS+ CDS 56992 57264 . - 0 ID=cds-PDP44186.1;Parent=gene-CLI86_04870;Dbxref=NCBI_GP:PDP44186.1;Name=PDP44186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04870;product=class I SAM-dependent methyltransferase;protein_id=PDP44186.1;transl_table=11 NSLJ01000009.1 Genbank gene 57278 58543 . - . ID=gene-CLI86_04875;Name=CLI86_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04875 NSLJ01000009.1 GeneMarkS+ CDS 57278 58543 . - 0 ID=cds-PDP44187.1;Parent=gene-CLI86_04875;Dbxref=NCBI_GP:PDP44187.1;Name=PDP44187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_04875;product=hypothetical protein;protein_id=PDP44187.1;transl_table=11 NSLJ01000009.1 Genbank gene 58630 59367 . - . ID=gene-CLI86_04880;Name=CLI86_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04880 NSLJ01000009.1 Protein Homology CDS 58630 59367 . - 0 ID=cds-PDP44188.1;Parent=gene-CLI86_04880;Dbxref=NCBI_GP:PDP44188.1;Name=PDP44188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005798400.1;locus_tag=CLI86_04880;product=short-chain dehydrogenase;protein_id=PDP44188.1;transl_table=11 NSLJ01000009.1 Genbank gene 59370 60155 . - . ID=gene-CLI86_04885;Name=CLI86_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04885 NSLJ01000009.1 Protein Homology CDS 59370 60155 . - 0 ID=cds-PDP44189.1;Parent=gene-CLI86_04885;Dbxref=NCBI_GP:PDP44189.1;Name=PDP44189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016478171.1;locus_tag=CLI86_04885;product=hydrolase;protein_id=PDP44189.1;transl_table=11 NSLJ01000009.1 Genbank gene 60157 61449 . - . ID=gene-CLI86_04890;Name=CLI86_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04890 NSLJ01000009.1 Protein Homology CDS 60157 61449 . - 0 ID=cds-PDP44190.1;Parent=gene-CLI86_04890;Dbxref=NCBI_GP:PDP44190.1;Name=PDP44190.1;Note=catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009750610.1;locus_tag=CLI86_04890;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=PDP44190.1;transl_table=11 NSLJ01000009.1 Genbank gene 61451 62434 . - . ID=gene-CLI86_04895;Name=CLI86_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04895 NSLJ01000009.1 Protein Homology CDS 61451 62434 . - 0 ID=cds-PDP44191.1;Parent=gene-CLI86_04895;Dbxref=NCBI_GP:PDP44191.1;Name=PDP44191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01408.20;locus_tag=CLI86_04895;product=3-chlorobenzoate-3%2C4-dioxygenase;protein_id=PDP44191.1;transl_table=11 NSLJ01000009.1 Genbank gene 62431 63147 . - . ID=gene-CLI86_04900;Name=CLI86_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04900 NSLJ01000009.1 Protein Homology CDS 62431 63147 . - 0 ID=cds-PDP44192.1;Parent=gene-CLI86_04900;Dbxref=NCBI_GP:PDP44192.1;Name=PDP44192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016478173.1;locus_tag=CLI86_04900;product=acylneuraminate cytidylyltransferase;protein_id=PDP44192.1;transl_table=11 NSLJ01000009.1 Genbank gene 63242 64357 . - . ID=gene-CLI86_04905;Name=CLI86_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04905 NSLJ01000009.1 Protein Homology CDS 63242 64357 . - 0 ID=cds-PDP44193.1;Parent=gene-CLI86_04905;Dbxref=NCBI_GP:PDP44193.1;Name=PDP44193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017817221.1;locus_tag=CLI86_04905;product=legionaminic acid biosynthesis protein PtmG;protein_id=PDP44193.1;transl_table=11 NSLJ01000009.1 Genbank gene 64364 64909 . - . ID=gene-CLI86_04910;Name=CLI86_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04910 NSLJ01000009.1 Protein Homology CDS 64364 64909 . - 0 ID=cds-PDP44194.1;Parent=gene-CLI86_04910;Dbxref=NCBI_GP:PDP44194.1;Name=PDP44194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13302.5;locus_tag=CLI86_04910;product=hypothetical protein;protein_id=PDP44194.1;transl_table=11 NSLJ01000009.1 Genbank gene 64969 66015 . - . ID=gene-CLI86_04915;Name=CLI86_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04915 NSLJ01000009.1 Protein Homology CDS 64969 66015 . - 0 ID=cds-PDP44195.1;Parent=gene-CLI86_04915;Dbxref=NCBI_GP:PDP44195.1;Name=PDP44195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005798406.1;locus_tag=CLI86_04915;product=nucleotidyltransferase;protein_id=PDP44195.1;transl_table=11 NSLJ01000009.1 Genbank gene 66008 67168 . - . ID=gene-CLI86_04920;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=CLI86_04920 NSLJ01000009.1 Protein Homology CDS 66008 67168 . - 0 ID=cds-PDP44196.1;Parent=gene-CLI86_04920;Dbxref=NCBI_GP:PDP44196.1;Name=PDP44196.1;gbkey=CDS;gene=neuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014468371.1;locus_tag=CLI86_04920;product=UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);protein_id=PDP44196.1;transl_table=11 NSLJ01000009.1 Genbank gene 67165 68175 . - . ID=gene-CLI86_04925;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=CLI86_04925 NSLJ01000009.1 Protein Homology CDS 67165 68175 . - 0 ID=cds-PDP44197.1;Parent=gene-CLI86_04925;Dbxref=NCBI_GP:PDP44197.1;Name=PDP44197.1;gbkey=CDS;gene=neuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004292714.1;locus_tag=CLI86_04925;product=N-acetylneuraminate synthase;protein_id=PDP44197.1;transl_table=11 NSLJ01000009.1 Genbank gene 68172 68792 . - . ID=gene-CLI86_04930;Name=CLI86_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04930 NSLJ01000009.1 Protein Homology CDS 68172 68792 . - 0 ID=cds-PDP44198.1;Parent=gene-CLI86_04930;Dbxref=NCBI_GP:PDP44198.1;Name=PDP44198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00132.22;locus_tag=CLI86_04930;product=transferase;protein_id=PDP44198.1;transl_table=11 NSLJ01000009.1 Genbank gene 68789 69646 . - . ID=gene-CLI86_04935;Name=CLI86_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04935 NSLJ01000009.1 Protein Homology CDS 68789 69646 . - 0 ID=cds-PDP44199.1;Parent=gene-CLI86_04935;Dbxref=NCBI_GP:PDP44199.1;Name=PDP44199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005865697.1;locus_tag=CLI86_04935;product=formyl transferase;protein_id=PDP44199.1;transl_table=11 NSLJ01000009.1 Genbank gene 69647 70285 . - . ID=gene-CLI86_04940;Name=CLI86_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04940 NSLJ01000009.1 Protein Homology CDS 69647 70285 . - 0 ID=cds-PDP44200.1;Parent=gene-CLI86_04940;Dbxref=NCBI_GP:PDP44200.1;Name=PDP44200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013007118.1;locus_tag=CLI86_04940;product=PIG-L domain-containing protein;protein_id=PDP44200.1;transl_table=11 NSLJ01000009.1 Genbank gene 70282 71445 . - . ID=gene-CLI86_04945;Name=CLI86_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04945 NSLJ01000009.1 Protein Homology CDS 70282 71445 . - 0 ID=cds-PDP44201.1;Parent=gene-CLI86_04945;Dbxref=NCBI_GP:PDP44201.1;Name=PDP44201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224488.1;locus_tag=CLI86_04945;product=aminotransferase DegT;protein_id=PDP44201.1;transl_table=11 NSLJ01000009.1 Genbank gene 71451 72431 . - . ID=gene-CLI86_04950;Name=CLI86_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04950 NSLJ01000009.1 Protein Homology CDS 71451 72431 . - 0 ID=cds-PDP44202.1;Parent=gene-CLI86_04950;Dbxref=NCBI_GP:PDP44202.1;Name=PDP44202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016778730.1;locus_tag=CLI86_04950;product=NAD-dependent dehydratase;protein_id=PDP44202.1;transl_table=11 NSLJ01000009.1 Genbank gene 72428 73879 . - . ID=gene-CLI86_04955;Name=CLI86_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04955 NSLJ01000009.1 Protein Homology CDS 72428 73879 . - 0 ID=cds-PDP44203.1;Parent=gene-CLI86_04955;Dbxref=NCBI_GP:PDP44203.1;Name=PDP44203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224490.1;locus_tag=CLI86_04955;product=flippase;protein_id=PDP44203.1;transl_table=11 NSLJ01000009.1 Genbank gene 73887 74861 . - . ID=gene-CLI86_04960;Name=CLI86_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04960 NSLJ01000009.1 Protein Homology CDS 73887 74861 . - 0 ID=cds-PDP44204.1;Parent=gene-CLI86_04960;Dbxref=NCBI_GP:PDP44204.1;Name=PDP44204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224491.1;locus_tag=CLI86_04960;product=hypothetical protein;protein_id=PDP44204.1;transl_table=11 NSLJ01000009.1 Genbank gene 74881 75924 . - . ID=gene-CLI86_04965;Name=CLI86_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04965 NSLJ01000009.1 Protein Homology CDS 74881 75924 . - 0 ID=cds-PDP44231.1;Parent=gene-CLI86_04965;Dbxref=NCBI_GP:PDP44231.1;Name=PDP44231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864088.1;locus_tag=CLI86_04965;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP44231.1;transl_table=11 NSLJ01000009.1 Genbank gene 76160 77416 . - . ID=gene-CLI86_04970;Name=CLI86_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04970 NSLJ01000009.1 Protein Homology CDS 76160 77416 . - 0 ID=cds-PDP44205.1;Parent=gene-CLI86_04970;Dbxref=NCBI_GP:PDP44205.1;Name=PDP44205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224494.1;locus_tag=CLI86_04970;product=heavy metal-associated domain-containing protein;protein_id=PDP44205.1;transl_table=11 NSLJ01000009.1 Genbank gene 77455 79053 . - . ID=gene-CLI86_04975;Name=CLI86_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04975 NSLJ01000009.1 Protein Homology CDS 77455 79053 . - 0 ID=cds-PDP44206.1;Parent=gene-CLI86_04975;Dbxref=NCBI_GP:PDP44206.1;Name=PDP44206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224495.1;locus_tag=CLI86_04975;product=peptidase S41;protein_id=PDP44206.1;transl_table=11 NSLJ01000009.1 Genbank gene 79050 79529 . - . ID=gene-CLI86_04980;Name=CLI86_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04980 NSLJ01000009.1 Protein Homology CDS 79050 79529 . - 0 ID=cds-PDP44207.1;Parent=gene-CLI86_04980;Dbxref=NCBI_GP:PDP44207.1;Name=PDP44207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224496.1;locus_tag=CLI86_04980;product=pantetheine-phosphate adenylyltransferase;protein_id=PDP44207.1;transl_table=11 NSLJ01000009.1 Genbank gene 79540 81405 . - . ID=gene-CLI86_04985;Name=CLI86_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04985 NSLJ01000009.1 Protein Homology CDS 79540 81405 . - 0 ID=cds-PDP44208.1;Parent=gene-CLI86_04985;Dbxref=NCBI_GP:PDP44208.1;Name=PDP44208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224497.1;locus_tag=CLI86_04985;product=type IIA DNA topoisomerase subunit B;protein_id=PDP44208.1;transl_table=11 NSLJ01000009.1 Genbank gene 81409 82539 . - . ID=gene-CLI86_04990;Name=CLI86_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_04990 NSLJ01000009.1 Protein Homology CDS 81409 82539 . - 0 ID=cds-PDP44209.1;Parent=gene-CLI86_04990;Dbxref=NCBI_GP:PDP44209.1;Name=PDP44209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224498.1;locus_tag=CLI86_04990;product=hypothetical protein;protein_id=PDP44209.1;transl_table=11 NSLJ01000009.1 Genbank gene 82619 84082 . - . ID=gene-CLI86_04995;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CLI86_04995 NSLJ01000009.1 Protein Homology CDS 82619 84082 . - 0 ID=cds-PDP44232.1;Parent=gene-CLI86_04995;Dbxref=NCBI_GP:PDP44232.1;Name=PDP44232.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224499.1;locus_tag=CLI86_04995;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=PDP44232.1;transl_table=11 NSLJ01000009.1 Genbank gene 84241 84313 . + . ID=gene-CLI86_05000;Name=CLI86_05000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI86_05000 NSLJ01000009.1 tRNAscan-SE tRNA 84241 84313 . + . ID=rna-CLI86_05000;Parent=gene-CLI86_05000;anticodon=(pos:84274..84276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_05000;product=tRNA-Lys NSLJ01000009.1 tRNAscan-SE exon 84241 84313 . + . ID=exon-CLI86_05000-1;Parent=rna-CLI86_05000;anticodon=(pos:84274..84276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI86_05000;product=tRNA-Lys NSLJ01000009.1 Genbank gene 84511 87270 . - . ID=gene-CLI86_05005;Name=CLI86_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05005 NSLJ01000009.1 Protein Homology CDS 84511 87270 . - 0 ID=cds-PDP44210.1;Parent=gene-CLI86_05005;Dbxref=NCBI_GP:PDP44210.1;Name=PDP44210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224500.1;locus_tag=CLI86_05005;product=transglutaminase;protein_id=PDP44210.1;transl_table=11 NSLJ01000009.1 Genbank gene 87436 88197 . - . ID=gene-CLI86_05010;Name=CLI86_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05010 NSLJ01000009.1 Protein Homology CDS 87436 88197 . - 0 ID=cds-PDP44211.1;Parent=gene-CLI86_05010;Dbxref=NCBI_GP:PDP44211.1;Name=PDP44211.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06293.12;locus_tag=CLI86_05010;product=hypothetical protein;protein_id=PDP44211.1;transl_table=11 NSLJ01000009.1 Genbank gene 88194 89228 . - . ID=gene-CLI86_05015;Name=CLI86_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05015 NSLJ01000009.1 Protein Homology CDS 88194 89228 . - 0 ID=cds-PDP44212.1;Parent=gene-CLI86_05015;Dbxref=NCBI_GP:PDP44212.1;Name=PDP44212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224502.1;locus_tag=CLI86_05015;product=glycosyltransferase family 9 protein;protein_id=PDP44212.1;transl_table=11 NSLJ01000009.1 Genbank gene 89272 89859 . - . ID=gene-CLI86_05020;Name=CLI86_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05020 NSLJ01000009.1 Protein Homology CDS 89272 89859 . - 0 ID=cds-PDP44233.1;Parent=gene-CLI86_05020;Dbxref=NCBI_GP:PDP44233.1;Name=PDP44233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005864028.1;locus_tag=CLI86_05020;product=phosphoribosylglycinamide formyltransferase;protein_id=PDP44233.1;transl_table=11 NSLJ01000009.1 Genbank gene 90019 90255 . + . ID=gene-CLI86_05025;Name=CLI86_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05025 NSLJ01000009.1 Protein Homology CDS 90019 90255 . + 0 ID=cds-PDP44234.1;Parent=gene-CLI86_05025;Dbxref=NCBI_GP:PDP44234.1;Name=PDP44234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005844276.1;locus_tag=CLI86_05025;product=acyl carrier protein;protein_id=PDP44234.1;transl_table=11 NSLJ01000009.1 Genbank gene 90273 91529 . + . ID=gene-CLI86_05030;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CLI86_05030 NSLJ01000009.1 Protein Homology CDS 90273 91529 . + 0 ID=cds-PDP44213.1;Parent=gene-CLI86_05030;Dbxref=NCBI_GP:PDP44213.1;Name=PDP44213.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097502.1;locus_tag=CLI86_05030;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=PDP44213.1;transl_table=11 NSLJ01000009.1 Genbank gene 91538 92329 . + . ID=gene-CLI86_05035;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CLI86_05035 NSLJ01000009.1 Protein Homology CDS 91538 92329 . + 0 ID=cds-PDP44235.1;Parent=gene-CLI86_05035;Dbxref=NCBI_GP:PDP44235.1;Name=PDP44235.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224506.1;locus_tag=CLI86_05035;product=ribonuclease III;protein_id=PDP44235.1;transl_table=11 NSLJ01000009.1 Genbank gene 92552 92905 . - . ID=gene-CLI86_05040;Name=CLI86_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05040 NSLJ01000009.1 Protein Homology CDS 92552 92905 . - 0 ID=cds-PDP44214.1;Parent=gene-CLI86_05040;Dbxref=NCBI_GP:PDP44214.1;Name=PDP44214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224507.1;locus_tag=CLI86_05040;product=hypothetical protein;protein_id=PDP44214.1;transl_table=11 NSLJ01000009.1 Genbank gene 93017 94027 . - . ID=gene-CLI86_05045;Name=CLI86_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05045 NSLJ01000009.1 Protein Homology CDS 93017 94027 . - 0 ID=cds-PDP44215.1;Parent=gene-CLI86_05045;Dbxref=NCBI_GP:PDP44215.1;Name=PDP44215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224509.1;locus_tag=CLI86_05045;product=6-phosphofructokinase;protein_id=PDP44215.1;transl_table=11 NSLJ01000009.1 Genbank gene 94174 95610 . + . ID=gene-CLI86_05050;Name=CLI86_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05050 NSLJ01000009.1 Protein Homology CDS 94174 95610 . + 0 ID=cds-PDP44216.1;Parent=gene-CLI86_05050;Dbxref=NCBI_GP:PDP44216.1;Name=PDP44216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224510.1;locus_tag=CLI86_05050;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PDP44216.1;transl_table=11 NSLJ01000009.1 Genbank gene 95704 98961 . + . ID=gene-CLI86_05055;Name=CLI86_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05055 NSLJ01000009.1 Protein Homology CDS 95704 98961 . + 0 ID=cds-PDP44217.1;Parent=gene-CLI86_05055;Dbxref=NCBI_GP:PDP44217.1;Name=PDP44217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013408426.1;locus_tag=CLI86_05055;product=TonB-dependent receptor;protein_id=PDP44217.1;transl_table=11 NSLJ01000009.1 Genbank gene 99720 101597 . + . ID=gene-CLI86_05060;Name=CLI86_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05060 NSLJ01000009.1 Protein Homology CDS 99720 101597 . + 0 ID=cds-PDP44218.1;Parent=gene-CLI86_05060;Dbxref=NCBI_GP:PDP44218.1;Name=PDP44218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008156150.1;locus_tag=CLI86_05060;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=PDP44218.1;transl_table=11 NSLJ01000009.1 Genbank gene 101643 103448 . + . ID=gene-CLI86_05065;Name=CLI86_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05065 NSLJ01000009.1 Protein Homology CDS 101643 103448 . + 0 ID=cds-PDP44219.1;Parent=gene-CLI86_05065;Dbxref=NCBI_GP:PDP44219.1;Name=PDP44219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224514.1;locus_tag=CLI86_05065;product=excinuclease ABC subunit C;protein_id=PDP44219.1;transl_table=11 NSLJ01000009.1 Genbank gene 103479 103925 . + . ID=gene-CLI86_05070;Name=CLI86_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05070 NSLJ01000009.1 Protein Homology CDS 103479 103925 . + 0 ID=cds-PDP44220.1;Parent=gene-CLI86_05070;Dbxref=NCBI_GP:PDP44220.1;Name=PDP44220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005860440.1;locus_tag=CLI86_05070;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=PDP44220.1;transl_table=11 NSLJ01000009.1 Genbank gene 104274 106745 . - . ID=gene-CLI86_05075;Name=CLI86_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05075 NSLJ01000009.1 Protein Homology CDS 104274 106745 . - 0 ID=cds-PDP44221.1;Parent=gene-CLI86_05075;Dbxref=NCBI_GP:PDP44221.1;Name=PDP44221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225808.1;locus_tag=CLI86_05075;product=hypothetical protein;protein_id=PDP44221.1;transl_table=11 NSLJ01000009.1 Genbank gene 106760 107497 . - . ID=gene-CLI86_05080;Name=CLI86_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05080 NSLJ01000009.1 GeneMarkS+ CDS 106760 107497 . - 0 ID=cds-PDP44222.1;Parent=gene-CLI86_05080;Dbxref=NCBI_GP:PDP44222.1;Name=PDP44222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05080;product=hypothetical protein;protein_id=PDP44222.1;transl_table=11 NSLJ01000009.1 Genbank gene 107945 109771 . - . ID=gene-CLI86_05085;Name=CLI86_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05085 NSLJ01000009.1 Protein Homology CDS 107945 109771 . - 0 ID=cds-PDP44223.1;Parent=gene-CLI86_05085;Dbxref=NCBI_GP:PDP44223.1;Name=PDP44223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05572.11;locus_tag=CLI86_05085;product=hypothetical protein;protein_id=PDP44223.1;transl_table=11 NSLJ01000009.1 Genbank gene 109774 110163 . - . ID=gene-CLI86_05090;Name=CLI86_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05090 NSLJ01000009.1 GeneMarkS+ CDS 109774 110163 . - 0 ID=cds-PDP44224.1;Parent=gene-CLI86_05090;Dbxref=NCBI_GP:PDP44224.1;Name=PDP44224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05090;product=hypothetical protein;protein_id=PDP44224.1;transl_table=11 NSLJ01000009.1 Genbank gene 110664 112298 . - . ID=gene-CLI86_05095;Name=CLI86_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05095 NSLJ01000009.1 Protein Homology CDS 110664 112298 . - 0 ID=cds-PDP44225.1;Parent=gene-CLI86_05095;Dbxref=NCBI_GP:PDP44225.1;Name=PDP44225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224587.1;locus_tag=CLI86_05095;product=hypothetical protein;protein_id=PDP44225.1;transl_table=11 NSLJ01000009.1 Genbank gene 112310 112723 . - . ID=gene-CLI86_05100;Name=CLI86_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI86_05100 NSLJ01000009.1 GeneMarkS+ CDS 112310 112723 . - 0 ID=cds-PDP44226.1;Parent=gene-CLI86_05100;Dbxref=NCBI_GP:PDP44226.1;Name=PDP44226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI86_05100;product=hypothetical protein;protein_id=PDP44226.1;transl_table=11 NSLJ01000009.1 Genbank pseudogene 113422 113682 . - . ID=gene-CLI86_05105;Name=CLI86_05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI86_05105;pseudo=true NSLJ01000009.1 Protein Homology CDS 113422 113682 . - 0 ID=cds-CLI86_05105;Parent=gene-CLI86_05105;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225808.1;locus_tag=CLI86_05105;product=hypothetical protein;pseudo=true;transl_table=11 ###