##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM252915v1 #!genome-build-accession NCBI_Assembly:GCA_002529155.1 #!annotation-date 09/05/2017 11:39:35 #!annotation-source NCBI ##sequence-region NSLS01000100.1 1 478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000100.1 Genbank region 1 478 . + . ID=NSLS01000100.1:1..478;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000100.1 Genbank gene 1 478 . + . ID=gene-CLI77_10640;Name=CLI77_10640;end_range=478,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10640;partial=true;start_range=.,1 NSLS01000100.1 Protein Homology CDS 1 478 . + 2 ID=cds-PDP46255.1;Parent=gene-CLI77_10640;Dbxref=NCBI_GP:PDP46255.1;Name=PDP46255.1;end_range=478,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003664791.1;locus_tag=CLI77_10640;partial=true;product=cysteine synthase A;protein_id=PDP46255.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000101.1 1 473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000101.1 Genbank region 1 473 . + . ID=NSLS01000101.1:1..473;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000102.1 1 449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000102.1 Genbank region 1 449 . + . ID=NSLS01000102.1:1..449;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000102.1 Genbank gene 140 449 . - . ID=gene-CLI77_10645;Name=CLI77_10645;end_range=449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10645;partial=true NSLS01000102.1 Protein Homology CDS 140 449 . - 1 ID=cds-PDP46215.1;Parent=gene-CLI77_10645;Dbxref=NCBI_GP:PDP46215.1;Name=PDP46215.1;end_range=449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_10645;partial=true;product=IS982 family transposase;protein_id=PDP46215.1;transl_table=11 ##sequence-region NSLS01000103.1 1 445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000103.1 Genbank region 1 445 . + . ID=NSLS01000103.1:1..445;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000103.1 Genbank gene 1 445 . - . ID=gene-CLI77_10650;Name=CLI77_10650;end_range=445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10650;partial=true;start_range=.,1 NSLS01000103.1 Protein Homology CDS 1 445 . - 2 ID=cds-PDP46179.1;Parent=gene-CLI77_10650;Dbxref=NCBI_GP:PDP46179.1;Name=PDP46179.1;end_range=445,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004142371.1;locus_tag=CLI77_10650;partial=true;product=EamA family transporter;protein_id=PDP46179.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000104.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000104.1 Genbank region 1 410 . + . ID=NSLS01000104.1:1..410;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000104.1 Genbank gene 126 338 . + . ID=gene-CLI77_10655;Name=CLI77_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10655 NSLS01000104.1 Protein Homology CDS 126 338 . + 0 ID=cds-PDP46175.1;Parent=gene-CLI77_10655;Dbxref=NCBI_GP:PDP46175.1;Name=PDP46175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815181.1;locus_tag=CLI77_10655;product=hypothetical protein;protein_id=PDP46175.1;transl_table=11 ##sequence-region NSLS01000105.1 1 391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000105.1 Genbank region 1 391 . + . ID=NSLS01000105.1:1..391;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000105.1 Genbank pseudogene 7 391 . + . ID=gene-CLI77_10660;Name=CLI77_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10660;pseudo=true NSLS01000105.1 Protein Homology CDS 7 391 . + 0 ID=cds-CLI77_10660;Parent=gene-CLI77_10660;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10660;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000106.1 1 383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000106.1 Genbank region 1 383 . + . ID=NSLS01000106.1:1..383;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000106.1 Genbank gene 1 274 . + . ID=gene-CLI77_10665;Name=CLI77_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10665;partial=true;start_range=.,1 NSLS01000106.1 Protein Homology CDS 1 274 . + 1 ID=cds-PDP46118.1;Parent=gene-CLI77_10665;Dbxref=NCBI_GP:PDP46118.1;Name=PDP46118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708609.1;locus_tag=CLI77_10665;partial=true;product=IS982 family transposase;protein_id=PDP46118.1;start_range=.,1;transl_table=11 NSLS01000106.1 Genbank gene 271 383 . - . ID=gene-CLI77_10670;Name=CLI77_10670;end_range=383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10670;partial=true NSLS01000106.1 Protein Homology CDS 271 383 . - 2 ID=cds-PDP46119.1;Parent=gene-CLI77_10670;Dbxref=NCBI_GP:PDP46119.1;Name=PDP46119.1;end_range=383,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI77_10670;partial=true;product=ISAs1 family transposase;protein_id=PDP46119.1;transl_table=11 ##sequence-region NSLS01000107.1 1 382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000107.1 Genbank region 1 382 . + . ID=NSLS01000107.1:1..382;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000107.1 Genbank gene 145 336 . + . ID=gene-CLI77_10675;Name=CLI77_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10675 NSLS01000107.1 Protein Homology CDS 145 336 . + 0 ID=cds-PDP46091.1;Parent=gene-CLI77_10675;Dbxref=NCBI_GP:PDP46091.1;Name=PDP46091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816082.1;locus_tag=CLI77_10675;product=hypothetical protein;protein_id=PDP46091.1;transl_table=11 ##sequence-region NSLS01000108.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000108.1 Genbank region 1 373 . + . ID=NSLS01000108.1:1..373;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000108.1 Genbank gene 54 248 . - . ID=gene-CLI77_10680;Name=CLI77_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10680 NSLS01000108.1 Protein Homology CDS 54 248 . - 0 ID=cds-PDP46057.1;Parent=gene-CLI77_10680;Dbxref=NCBI_GP:PDP46057.1;Name=PDP46057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815165.1;locus_tag=CLI77_10680;product=hypothetical protein;protein_id=PDP46057.1;transl_table=11 ##sequence-region NSLS01000109.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000109.1 Genbank region 1 305 . + . ID=NSLS01000109.1:1..305;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000109.1 Genbank gene 1 305 . - . ID=gene-CLI77_10685;Name=CLI77_10685;end_range=305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10685;partial=true;start_range=.,1 NSLS01000109.1 Protein Homology CDS 1 305 . - 1 ID=cds-PDP46028.1;Parent=gene-CLI77_10685;Dbxref=NCBI_GP:PDP46028.1;Name=PDP46028.1;end_range=305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10685;partial=true;product=IS3 family transposase;protein_id=PDP46028.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000010.1 1 69434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000010.1 Genbank region 1 69434 . + . ID=NSLS01000010.1:1..69434;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000010.1 Genbank pseudogene 1 385 . - . ID=gene-CLI77_04180;Name=CLI77_04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04180;pseudo=true NSLS01000010.1 Protein Homology CDS 1 385 . - 0 ID=cds-CLI77_04180;Parent=gene-CLI77_04180;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_04180;product=IS3 family transposase;pseudo=true;transl_table=11 NSLS01000010.1 Genbank gene 397 720 . - . ID=gene-CLI77_04185;Name=CLI77_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04185 NSLS01000010.1 Protein Homology CDS 397 720 . - 0 ID=cds-PDP49634.1;Parent=gene-CLI77_04185;Dbxref=NCBI_GP:PDP49634.1;Name=PDP49634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956114.1;locus_tag=CLI77_04185;product=hypothetical protein;protein_id=PDP49634.1;transl_table=11 NSLS01000010.1 Genbank gene 715 1371 . + . ID=gene-CLI77_04190;Name=CLI77_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04190 NSLS01000010.1 Protein Homology CDS 715 1371 . + 0 ID=cds-PDP49635.1;Parent=gene-CLI77_04190;Dbxref=NCBI_GP:PDP49635.1;Name=PDP49635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873546.1;locus_tag=CLI77_04190;product=PASTA domain-containing protein;protein_id=PDP49635.1;transl_table=11 NSLS01000010.1 Genbank gene 1421 2506 . + . ID=gene-CLI77_04195;Name=CLI77_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04195 NSLS01000010.1 Protein Homology CDS 1421 2506 . + 0 ID=cds-PDP49685.1;Parent=gene-CLI77_04195;Dbxref=NCBI_GP:PDP49685.1;Name=PDP49685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861030.1;locus_tag=CLI77_04195;product=pseudouridine synthase;protein_id=PDP49685.1;transl_table=11 NSLS01000010.1 Genbank gene 2573 3565 . + . ID=gene-CLI77_04200;Name=CLI77_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04200 NSLS01000010.1 Protein Homology CDS 2573 3565 . + 0 ID=cds-PDP49686.1;Parent=gene-CLI77_04200;Dbxref=NCBI_GP:PDP49686.1;Name=PDP49686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457758.1;locus_tag=CLI77_04200;product=D-alanine--D-alanine ligase;protein_id=PDP49686.1;transl_table=11 NSLS01000010.1 Genbank gene 3584 4750 . + . ID=gene-CLI77_04205;Name=CLI77_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04205 NSLS01000010.1 Protein Homology CDS 3584 4750 . + 0 ID=cds-PDP49636.1;Parent=gene-CLI77_04205;Dbxref=NCBI_GP:PDP49636.1;Name=PDP49636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585281.1;locus_tag=CLI77_04205;product=acyltransferase;protein_id=PDP49636.1;transl_table=11 NSLS01000010.1 Genbank gene 4984 5373 . + . ID=gene-CLI77_04210;Name=CLI77_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04210 NSLS01000010.1 Protein Homology CDS 4984 5373 . + 0 ID=cds-PDP49637.1;Parent=gene-CLI77_04210;Dbxref=NCBI_GP:PDP49637.1;Name=PDP49637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585280.1;locus_tag=CLI77_04210;product=PEGA domain-containing protein;protein_id=PDP49637.1;transl_table=11 NSLS01000010.1 Genbank gene 5438 6064 . - . ID=gene-CLI77_04215;Name=CLI77_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04215 NSLS01000010.1 Protein Homology CDS 5438 6064 . - 0 ID=cds-PDP49638.1;Parent=gene-CLI77_04215;Dbxref=NCBI_GP:PDP49638.1;Name=PDP49638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873545.1;locus_tag=CLI77_04215;product=haloacid dehalogenase;protein_id=PDP49638.1;transl_table=11 NSLS01000010.1 Genbank gene 6149 8203 . - . ID=gene-CLI77_04220;Name=CLI77_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04220 NSLS01000010.1 Protein Homology CDS 6149 8203 . - 0 ID=cds-PDP49639.1;Parent=gene-CLI77_04220;Dbxref=NCBI_GP:PDP49639.1;Name=PDP49639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585278.1;locus_tag=CLI77_04220;product=peptidase S9;protein_id=PDP49639.1;transl_table=11 NSLS01000010.1 Genbank gene 8868 9476 . - . ID=gene-CLI77_04225;Name=CLI77_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04225 NSLS01000010.1 Protein Homology CDS 8868 9476 . - 0 ID=cds-PDP49640.1;Parent=gene-CLI77_04225;Dbxref=NCBI_GP:PDP49640.1;Name=PDP49640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873568.1;locus_tag=CLI77_04225;product=hydrolase Nlp/P60;protein_id=PDP49640.1;transl_table=11 NSLS01000010.1 Genbank gene 9708 10445 . + . ID=gene-CLI77_04230;Name=CLI77_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04230 NSLS01000010.1 Protein Homology CDS 9708 10445 . + 0 ID=cds-PDP49641.1;Parent=gene-CLI77_04230;Dbxref=NCBI_GP:PDP49641.1;Name=PDP49641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457753.1;locus_tag=CLI77_04230;product=DNA-binding response regulator;protein_id=PDP49641.1;transl_table=11 NSLS01000010.1 Genbank pseudogene 10376 10525 . + . ID=gene-CLI77_04235;Name=CLI77_04235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04235;pseudo=true NSLS01000010.1 Protein Homology CDS 10376 10525 . + 0 ID=cds-CLI77_04235;Parent=gene-CLI77_04235;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585273.1;locus_tag=CLI77_04235;product=histidine kinase;pseudo=true;transl_table=11 NSLS01000010.1 Genbank gene 10578 10967 . - . ID=gene-CLI77_04240;Name=CLI77_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04240 NSLS01000010.1 Protein Homology CDS 10578 10967 . - 0 ID=cds-PDP49642.1;Parent=gene-CLI77_04240;Dbxref=NCBI_GP:PDP49642.1;Name=PDP49642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873577.1;locus_tag=CLI77_04240;product=hypothetical protein;protein_id=PDP49642.1;transl_table=11 NSLS01000010.1 Genbank gene 11001 11921 . + . ID=gene-CLI77_04245;Name=CLI77_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04245 NSLS01000010.1 Protein Homology CDS 11001 11921 . + 0 ID=cds-PDP49643.1;Parent=gene-CLI77_04245;Dbxref=NCBI_GP:PDP49643.1;Name=PDP49643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873610.1;locus_tag=CLI77_04245;product=magnesium transporter CorA;protein_id=PDP49643.1;transl_table=11 NSLS01000010.1 Genbank gene 11926 12672 . + . ID=gene-CLI77_04250;Name=CLI77_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04250 NSLS01000010.1 Protein Homology CDS 11926 12672 . + 0 ID=cds-PDP49644.1;Parent=gene-CLI77_04250;Dbxref=NCBI_GP:PDP49644.1;Name=PDP49644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816427.1;locus_tag=CLI77_04250;product=copper homeostasis protein CutC;protein_id=PDP49644.1;transl_table=11 NSLS01000010.1 Genbank gene 12848 13444 . + . ID=gene-CLI77_04255;Name=CLI77_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04255 NSLS01000010.1 Protein Homology CDS 12848 13444 . + 0 ID=cds-PDP49645.1;Parent=gene-CLI77_04255;Dbxref=NCBI_GP:PDP49645.1;Name=PDP49645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965571.1;locus_tag=CLI77_04255;product=type 1 glutamine amidotransferase;protein_id=PDP49645.1;transl_table=11 NSLS01000010.1 Genbank gene 13466 13813 . + . ID=gene-CLI77_04260;Name=CLI77_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04260 NSLS01000010.1 Protein Homology CDS 13466 13813 . + 0 ID=cds-PDP49646.1;Parent=gene-CLI77_04260;Dbxref=NCBI_GP:PDP49646.1;Name=PDP49646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585261.1;locus_tag=CLI77_04260;product=diguanylate cyclase;protein_id=PDP49646.1;transl_table=11 NSLS01000010.1 Genbank gene 13939 16194 . - . ID=gene-CLI77_04265;Name=CLI77_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04265 NSLS01000010.1 Protein Homology CDS 13939 16194 . - 0 ID=cds-PDP49647.1;Parent=gene-CLI77_04265;Dbxref=NCBI_GP:PDP49647.1;Name=PDP49647.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04183;locus_tag=CLI77_04265;product=hypothetical protein;protein_id=PDP49647.1;transl_table=11 NSLS01000010.1 Genbank gene 17116 17703 . + . ID=gene-CLI77_04270;Name=CLI77_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04270 NSLS01000010.1 Protein Homology CDS 17116 17703 . + 0 ID=cds-PDP49648.1;Parent=gene-CLI77_04270;Dbxref=NCBI_GP:PDP49648.1;Name=PDP49648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585258.1;locus_tag=CLI77_04270;product=peptidylprolyl isomerase;protein_id=PDP49648.1;transl_table=11 NSLS01000010.1 Genbank gene 17733 18494 . + . ID=gene-CLI77_04275;Name=CLI77_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04275 NSLS01000010.1 Protein Homology CDS 17733 18494 . + 0 ID=cds-PDP49649.1;Parent=gene-CLI77_04275;Dbxref=NCBI_GP:PDP49649.1;Name=PDP49649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585257.1;locus_tag=CLI77_04275;product=peptidylprolyl isomerase;protein_id=PDP49649.1;transl_table=11 NSLS01000010.1 Genbank gene 18522 19352 . + . ID=gene-CLI77_04280;Name=CLI77_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04280 NSLS01000010.1 Protein Homology CDS 18522 19352 . + 0 ID=cds-PDP49650.1;Parent=gene-CLI77_04280;Dbxref=NCBI_GP:PDP49650.1;Name=PDP49650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585256.1;locus_tag=CLI77_04280;product=peptidylprolyl isomerase;protein_id=PDP49650.1;transl_table=11 NSLS01000010.1 Genbank gene 19518 22064 . + . ID=gene-CLI77_04285;Name=CLI77_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04285 NSLS01000010.1 Protein Homology CDS 19518 22064 . + 0 ID=cds-PDP49651.1;Parent=gene-CLI77_04285;Dbxref=NCBI_GP:PDP49651.1;Name=PDP49651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585254.1;locus_tag=CLI77_04285;product=TonB-dependent receptor;protein_id=PDP49651.1;transl_table=11 NSLS01000010.1 Genbank gene 22301 22732 . - . ID=gene-CLI77_04290;Name=CLI77_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04290 NSLS01000010.1 Protein Homology CDS 22301 22732 . - 0 ID=cds-PDP49687.1;Parent=gene-CLI77_04290;Dbxref=NCBI_GP:PDP49687.1;Name=PDP49687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457744.1;locus_tag=CLI77_04290;product=META domain-containing protein;protein_id=PDP49687.1;transl_table=11 NSLS01000010.1 Genbank gene 22750 23574 . - . ID=gene-CLI77_04295;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CLI77_04295 NSLS01000010.1 Protein Homology CDS 22750 23574 . - 0 ID=cds-PDP49652.1;Parent=gene-CLI77_04295;Dbxref=NCBI_GP:PDP49652.1;Name=PDP49652.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585251.1;locus_tag=CLI77_04295;product=glutamate racemase;protein_id=PDP49652.1;transl_table=11 NSLS01000010.1 Genbank gene 23636 24175 . - . ID=gene-CLI77_04300;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=CLI77_04300 NSLS01000010.1 Protein Homology CDS 23636 24175 . - 0 ID=cds-PDP49653.1;Parent=gene-CLI77_04300;Dbxref=NCBI_GP:PDP49653.1;Name=PDP49653.1;gbkey=CDS;gene=cobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457742.1;locus_tag=CLI77_04300;product=alpha-ribazole phosphatase;protein_id=PDP49653.1;transl_table=11 NSLS01000010.1 Genbank gene 24177 24959 . - . ID=gene-CLI77_04305;Name=CLI77_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04305 NSLS01000010.1 Protein Homology CDS 24177 24959 . - 0 ID=cds-PDP49654.1;Parent=gene-CLI77_04305;Dbxref=NCBI_GP:PDP49654.1;Name=PDP49654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585249.1;locus_tag=CLI77_04305;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=PDP49654.1;transl_table=11 NSLS01000010.1 Genbank gene 24966 26003 . - . ID=gene-CLI77_04310;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CLI77_04310 NSLS01000010.1 Protein Homology CDS 24966 26003 . - 0 ID=cds-PDP49655.1;Parent=gene-CLI77_04310;Dbxref=NCBI_GP:PDP49655.1;Name=PDP49655.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965583.1;locus_tag=CLI77_04310;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=PDP49655.1;transl_table=11 NSLS01000010.1 Genbank gene 26056 26592 . - . ID=gene-CLI77_04315;Name=CLI77_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04315 NSLS01000010.1 Protein Homology CDS 26056 26592 . - 0 ID=cds-PDP49656.1;Parent=gene-CLI77_04315;Dbxref=NCBI_GP:PDP49656.1;Name=PDP49656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585247.1;locus_tag=CLI77_04315;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=PDP49656.1;transl_table=11 NSLS01000010.1 Genbank pseudogene 26528 26987 . + . ID=gene-CLI77_04320;Name=CLI77_04320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04320;pseudo=true NSLS01000010.1 Protein Homology CDS 26528 26987 . + 0 ID=cds-CLI77_04320;Parent=gene-CLI77_04320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816420.1;locus_tag=CLI77_04320;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000010.1 Genbank gene 27197 29767 . + . ID=gene-CLI77_04325;Name=CLI77_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04325 NSLS01000010.1 Protein Homology CDS 27197 29767 . + 0 ID=cds-PDP49657.1;Parent=gene-CLI77_04325;Dbxref=NCBI_GP:PDP49657.1;Name=PDP49657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585243.1;locus_tag=CLI77_04325;product=alpha-glucan phosphorylase;protein_id=PDP49657.1;transl_table=11 NSLS01000010.1 Genbank gene 29799 30782 . + . ID=gene-CLI77_04330;Name=CLI77_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04330 NSLS01000010.1 Protein Homology CDS 29799 30782 . + 0 ID=cds-PDP49658.1;Parent=gene-CLI77_04330;Dbxref=NCBI_GP:PDP49658.1;Name=PDP49658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956106.1;locus_tag=CLI77_04330;product=DUF5106 domain-containing protein;protein_id=PDP49658.1;transl_table=11 NSLS01000010.1 Genbank gene 31088 32263 . + . ID=gene-CLI77_04335;Name=CLI77_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04335 NSLS01000010.1 Protein Homology CDS 31088 32263 . + 0 ID=cds-PDP49659.1;Parent=gene-CLI77_04335;Dbxref=NCBI_GP:PDP49659.1;Name=PDP49659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457733.1;locus_tag=CLI77_04335;product=outer membrane protein 41;protein_id=PDP49659.1;transl_table=11 NSLS01000010.1 Genbank gene 32310 33452 . + . ID=gene-CLI77_04340;Name=CLI77_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04340 NSLS01000010.1 Protein Homology CDS 32310 33452 . + 0 ID=cds-PDP49660.1;Parent=gene-CLI77_04340;Dbxref=NCBI_GP:PDP49660.1;Name=PDP49660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873620.1;locus_tag=CLI77_04340;product=outer membrane protein 40;protein_id=PDP49660.1;transl_table=11 NSLS01000010.1 cmsearch riboswitch 33650 33853 . + . ID=id-NSLS01000010.1:33650..33853;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000010.1 Genbank gene 34153 35613 . + . ID=gene-CLI77_04345;Name=CLI77_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04345 NSLS01000010.1 Protein Homology CDS 34153 35613 . + 0 ID=cds-PDP49661.1;Parent=gene-CLI77_04345;Dbxref=NCBI_GP:PDP49661.1;Name=PDP49661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331893.1;locus_tag=CLI77_04345;product=4-hydroxybutyryl-CoA dehydratase;protein_id=PDP49661.1;transl_table=11 NSLS01000010.1 Genbank gene 35686 35970 . + . ID=gene-CLI77_04350;Name=CLI77_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04350 NSLS01000010.1 Protein Homology CDS 35686 35970 . + 0 ID=cds-PDP49662.1;Parent=gene-CLI77_04350;Dbxref=NCBI_GP:PDP49662.1;Name=PDP49662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816413.1;locus_tag=CLI77_04350;product=NifU family protein;protein_id=PDP49662.1;transl_table=11 NSLS01000010.1 Genbank gene 35976 37271 . + . ID=gene-CLI77_04355;Name=CLI77_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04355 NSLS01000010.1 Protein Homology CDS 35976 37271 . + 0 ID=cds-PDP49663.1;Parent=gene-CLI77_04355;Dbxref=NCBI_GP:PDP49663.1;Name=PDP49663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965552.1;locus_tag=CLI77_04355;product=4-hydroxybutyrate CoA-transferase;protein_id=PDP49663.1;transl_table=11 NSLS01000010.1 Genbank gene 37322 38437 . + . ID=gene-CLI77_04360;Name=CLI77_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04360 NSLS01000010.1 Protein Homology CDS 37322 38437 . + 0 ID=cds-PDP49664.1;Parent=gene-CLI77_04360;Dbxref=NCBI_GP:PDP49664.1;Name=PDP49664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018357741.1;locus_tag=CLI77_04360;product=NAD-dependent alcohol dehydrogenase;protein_id=PDP49664.1;transl_table=11 NSLS01000010.1 Genbank gene 38633 39988 . + . ID=gene-CLI77_04365;Name=CLI77_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04365 NSLS01000010.1 Protein Homology CDS 38633 39988 . + 0 ID=cds-PDP49665.1;Parent=gene-CLI77_04365;Dbxref=NCBI_GP:PDP49665.1;Name=PDP49665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457729.1;locus_tag=CLI77_04365;product=succinate-semialdehyde dehydrogenase;protein_id=PDP49665.1;transl_table=11 NSLS01000010.1 Genbank gene 40472 42025 . + . ID=gene-CLI77_04370;Name=CLI77_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04370 NSLS01000010.1 Protein Homology CDS 40472 42025 . + 0 ID=cds-PDP49666.1;Parent=gene-CLI77_04370;Dbxref=NCBI_GP:PDP49666.1;Name=PDP49666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873549.1;locus_tag=CLI77_04370;product=diguanylate cyclase;protein_id=PDP49666.1;transl_table=11 NSLS01000010.1 Genbank gene 42354 43013 . - . ID=gene-CLI77_04375;Name=CLI77_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04375 NSLS01000010.1 Protein Homology CDS 42354 43013 . - 0 ID=cds-PDP49667.1;Parent=gene-CLI77_04375;Dbxref=NCBI_GP:PDP49667.1;Name=PDP49667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585231.1;locus_tag=CLI77_04375;product=ABC transporter ATP-binding protein;protein_id=PDP49667.1;transl_table=11 NSLS01000010.1 Genbank gene 43106 45481 . - . ID=gene-CLI77_04380;Name=CLI77_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04380 NSLS01000010.1 Protein Homology CDS 43106 45481 . - 0 ID=cds-PDP49668.1;Parent=gene-CLI77_04380;Dbxref=NCBI_GP:PDP49668.1;Name=PDP49668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585230.1;locus_tag=CLI77_04380;product=ABC transporter permease;protein_id=PDP49668.1;transl_table=11 NSLS01000010.1 Genbank gene 45508 47877 . - . ID=gene-CLI77_04385;Name=CLI77_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04385 NSLS01000010.1 Protein Homology CDS 45508 47877 . - 0 ID=cds-PDP49669.1;Parent=gene-CLI77_04385;Dbxref=NCBI_GP:PDP49669.1;Name=PDP49669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457726.1;locus_tag=CLI77_04385;product=ABC transporter permease;protein_id=PDP49669.1;transl_table=11 NSLS01000010.1 Genbank gene 47916 50267 . - . ID=gene-CLI77_04390;Name=CLI77_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04390 NSLS01000010.1 Protein Homology CDS 47916 50267 . - 0 ID=cds-PDP49670.1;Parent=gene-CLI77_04390;Dbxref=NCBI_GP:PDP49670.1;Name=PDP49670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457725.1;locus_tag=CLI77_04390;product=ABC transporter permease;protein_id=PDP49670.1;transl_table=11 NSLS01000010.1 Genbank pseudogene 50405 50608 . + . ID=gene-CLI77_04395;Name=CLI77_04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04395;pseudo=true NSLS01000010.1 Protein Homology CDS 50405 50608 . + 0 ID=cds-CLI77_04395;Parent=gene-CLI77_04395;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956105.1;locus_tag=CLI77_04395;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000010.1 Genbank gene 50790 52043 . - . ID=gene-CLI77_04400;Name=CLI77_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04400 NSLS01000010.1 Protein Homology CDS 50790 52043 . - 0 ID=cds-PDP49671.1;Parent=gene-CLI77_04400;Dbxref=NCBI_GP:PDP49671.1;Name=PDP49671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457723.1;locus_tag=CLI77_04400;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP49671.1;transl_table=11 NSLS01000010.1 Genbank gene 52083 53417 . - . ID=gene-CLI77_04405;Name=CLI77_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04405 NSLS01000010.1 Protein Homology CDS 52083 53417 . - 0 ID=cds-PDP49672.1;Parent=gene-CLI77_04405;Dbxref=NCBI_GP:PDP49672.1;Name=PDP49672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965565.1;locus_tag=CLI77_04405;product=transporter;protein_id=PDP49672.1;transl_table=11 NSLS01000010.1 Genbank gene 53620 54132 . - . ID=gene-CLI77_04410;Name=CLI77_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04410 NSLS01000010.1 Protein Homology CDS 53620 54132 . - 0 ID=cds-PDP49673.1;Parent=gene-CLI77_04410;Dbxref=NCBI_GP:PDP49673.1;Name=PDP49673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965566.1;locus_tag=CLI77_04410;product=pyrazinamidase;protein_id=PDP49673.1;transl_table=11 NSLS01000010.1 Genbank gene 54169 55362 . - . ID=gene-CLI77_04415;Name=CLI77_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04415 NSLS01000010.1 Protein Homology CDS 54169 55362 . - 0 ID=cds-PDP49674.1;Parent=gene-CLI77_04415;Dbxref=NCBI_GP:PDP49674.1;Name=PDP49674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225714.1;locus_tag=CLI77_04415;product=saccharopine dehydrogenase;protein_id=PDP49674.1;transl_table=11 NSLS01000010.1 Genbank gene 55790 56551 . + . ID=gene-CLI77_04420;Name=CLI77_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04420 NSLS01000010.1 Protein Homology CDS 55790 56551 . + 0 ID=cds-PDP49675.1;Parent=gene-CLI77_04420;Dbxref=NCBI_GP:PDP49675.1;Name=PDP49675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816400.1;locus_tag=CLI77_04420;product=NAD(P)-dependent oxidoreductase;protein_id=PDP49675.1;transl_table=11 NSLS01000010.1 Genbank gene 56629 58236 . + . ID=gene-CLI77_04425;Name=CLI77_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04425 NSLS01000010.1 Protein Homology CDS 56629 58236 . + 0 ID=cds-PDP49676.1;Parent=gene-CLI77_04425;Dbxref=NCBI_GP:PDP49676.1;Name=PDP49676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816399.1;locus_tag=CLI77_04425;product=indolepyruvate ferredoxin oxidoreductase;protein_id=PDP49676.1;transl_table=11 NSLS01000010.1 Genbank gene 58263 58856 . + . ID=gene-CLI77_04430;Name=CLI77_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04430 NSLS01000010.1 Protein Homology CDS 58263 58856 . + 0 ID=cds-PDP49677.1;Parent=gene-CLI77_04430;Dbxref=NCBI_GP:PDP49677.1;Name=PDP49677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585221.1;locus_tag=CLI77_04430;product=indolepyruvate oxidoreductase;protein_id=PDP49677.1;transl_table=11 NSLS01000010.1 Genbank gene 59977 60735 . - . ID=gene-CLI77_04435;Name=CLI77_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04435 NSLS01000010.1 Protein Homology CDS 59977 60735 . - 0 ID=cds-PDP49678.1;Parent=gene-CLI77_04435;Dbxref=NCBI_GP:PDP49678.1;Name=PDP49678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585220.1;locus_tag=CLI77_04435;product=ABC transporter ATP-binding protein;protein_id=PDP49678.1;transl_table=11 NSLS01000010.1 Genbank gene 60779 61849 . - . ID=gene-CLI77_04440;Name=CLI77_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04440 NSLS01000010.1 Protein Homology CDS 60779 61849 . - 0 ID=cds-PDP49679.1;Parent=gene-CLI77_04440;Dbxref=NCBI_GP:PDP49679.1;Name=PDP49679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816397.1;locus_tag=CLI77_04440;product=iron ABC transporter;protein_id=PDP49679.1;transl_table=11 NSLS01000010.1 Genbank gene 61846 62985 . - . ID=gene-CLI77_04445;Name=CLI77_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04445 NSLS01000010.1 Protein Homology CDS 61846 62985 . - 0 ID=cds-PDP49680.1;Parent=gene-CLI77_04445;Dbxref=NCBI_GP:PDP49680.1;Name=PDP49680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457715.1;locus_tag=CLI77_04445;product=iron ABC transporter substrate-binding protein;protein_id=PDP49680.1;transl_table=11 NSLS01000010.1 Genbank gene 63103 63984 . - . ID=gene-CLI77_04450;Name=CLI77_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04450 NSLS01000010.1 Protein Homology CDS 63103 63984 . - 0 ID=cds-PDP49681.1;Parent=gene-CLI77_04450;Dbxref=NCBI_GP:PDP49681.1;Name=PDP49681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585217.1;locus_tag=CLI77_04450;product=heme-binding protein;protein_id=PDP49681.1;transl_table=11 NSLS01000010.1 Genbank gene 64013 66286 . - . ID=gene-CLI77_04455;Name=CLI77_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04455 NSLS01000010.1 Protein Homology CDS 64013 66286 . - 0 ID=cds-PDP49682.1;Parent=gene-CLI77_04455;Dbxref=NCBI_GP:PDP49682.1;Name=PDP49682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873547.1;locus_tag=CLI77_04455;product=TonB-dependent receptor;protein_id=PDP49682.1;transl_table=11 NSLS01000010.1 cmsearch riboswitch 66483 66720 . - . ID=id-NSLS01000010.1:66483..66720;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000010.1 Genbank gene 66741 69011 . - . ID=gene-CLI77_04460;Name=CLI77_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04460 NSLS01000010.1 GeneMarkS+ CDS 66741 69011 . - 0 ID=cds-PDP49683.1;Parent=gene-CLI77_04460;Dbxref=NCBI_GP:PDP49683.1;Name=PDP49683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04460;product=hypothetical protein;protein_id=PDP49683.1;transl_table=11 NSLS01000010.1 Genbank gene 69019 69201 . - . ID=gene-CLI77_04465;Name=CLI77_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04465 NSLS01000010.1 GeneMarkS+ CDS 69019 69201 . - 0 ID=cds-PDP49684.1;Parent=gene-CLI77_04465;Dbxref=NCBI_GP:PDP49684.1;Name=PDP49684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04465;product=hypothetical protein;protein_id=PDP49684.1;transl_table=11 ##sequence-region NSLS01000110.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000110.1 Genbank region 1 263 . + . ID=NSLS01000110.1:1..263;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000111.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000111.1 Genbank region 1 258 . + . ID=NSLS01000111.1:1..258;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000112.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000112.1 Genbank region 1 252 . + . ID=NSLS01000112.1:1..252;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000113.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000113.1 Genbank region 1 250 . + . ID=NSLS01000113.1:1..250;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000114.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000114.1 Genbank region 1 243 . + . ID=NSLS01000114.1:1..243;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000114.1 Genbank gene 1 243 . + . ID=gene-CLI77_10690;Name=CLI77_10690;end_range=243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10690;partial=true;start_range=.,1 NSLS01000114.1 Protein Homology CDS 1 243 . + 2 ID=cds-PDP45924.1;Parent=gene-CLI77_10690;Dbxref=NCBI_GP:PDP45924.1;Name=PDP45924.1;end_range=243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10690;partial=true;product=IS3 family transposase;protein_id=PDP45924.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000115.1 1 26378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000115.1 Genbank region 1 26378 . + . ID=NSLS01000115.1:1..26378;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000115.1 Genbank gene 1 302 . - . ID=gene-CLI77_10695;Name=CLI77_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10695;partial=true;start_range=.,1 NSLS01000115.1 Protein Homology CDS 1 302 . - 0 ID=cds-PDP45874.1;Parent=gene-CLI77_10695;Dbxref=NCBI_GP:PDP45874.1;Name=PDP45874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008625412.1;locus_tag=CLI77_10695;partial=true;product=RNA polymerase subunit sigma;protein_id=PDP45874.1;start_range=.,1;transl_table=11 NSLS01000115.1 Genbank gene 492 1988 . - . ID=gene-CLI77_10700;Name=CLI77_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10700 NSLS01000115.1 Protein Homology CDS 492 1988 . - 0 ID=cds-PDP45875.1;Parent=gene-CLI77_10700;Dbxref=NCBI_GP:PDP45875.1;Name=PDP45875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585130.1;locus_tag=CLI77_10700;product=deoxyribonuclease HsdR;protein_id=PDP45875.1;transl_table=11 NSLS01000115.1 Genbank gene 2205 2462 . - . ID=gene-CLI77_10705;Name=CLI77_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10705 NSLS01000115.1 Protein Homology CDS 2205 2462 . - 0 ID=cds-PDP45876.1;Parent=gene-CLI77_10705;Dbxref=NCBI_GP:PDP45876.1;Name=PDP45876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585129.1;locus_tag=CLI77_10705;product=50S ribosomal protein L31 type B;protein_id=PDP45876.1;transl_table=11 NSLS01000115.1 Genbank gene 3179 4699 . + . ID=gene-CLI77_10710;Name=CLI77_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10710 NSLS01000115.1 Protein Homology CDS 3179 4699 . + 0 ID=cds-PDP45877.1;Parent=gene-CLI77_10710;Dbxref=NCBI_GP:PDP45877.1;Name=PDP45877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009433080.1;locus_tag=CLI77_10710;product=GMP synthase (glutamine-hydrolyzing);protein_id=PDP45877.1;transl_table=11 NSLS01000115.1 Genbank gene 4770 5591 . + . ID=gene-CLI77_10715;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CLI77_10715 NSLS01000115.1 Protein Homology CDS 4770 5591 . + 0 ID=cds-PDP45878.1;Parent=gene-CLI77_10715;Dbxref=NCBI_GP:PDP45878.1;Name=PDP45878.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005820112.1;locus_tag=CLI77_10715;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=PDP45878.1;transl_table=11 NSLS01000115.1 Genbank gene 5643 6275 . + . ID=gene-CLI77_10720;Name=CLI77_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10720 NSLS01000115.1 Protein Homology CDS 5643 6275 . + 0 ID=cds-PDP45879.1;Parent=gene-CLI77_10720;Dbxref=NCBI_GP:PDP45879.1;Name=PDP45879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585126.1;locus_tag=CLI77_10720;product=hypothetical protein;protein_id=PDP45879.1;transl_table=11 NSLS01000115.1 Genbank gene 6864 7085 . + . ID=gene-CLI77_10725;Name=CLI77_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10725 NSLS01000115.1 Protein Homology CDS 6864 7085 . + 0 ID=cds-PDP45880.1;Parent=gene-CLI77_10725;Dbxref=NCBI_GP:PDP45880.1;Name=PDP45880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816674.1;locus_tag=CLI77_10725;product=hypothetical protein;protein_id=PDP45880.1;transl_table=11 NSLS01000115.1 Genbank gene 7054 7503 . - . ID=gene-CLI77_10730;Name=CLI77_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10730 NSLS01000115.1 Protein Homology CDS 7054 7503 . - 0 ID=cds-PDP45881.1;Parent=gene-CLI77_10730;Dbxref=NCBI_GP:PDP45881.1;Name=PDP45881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585125.1;locus_tag=CLI77_10730;product=glutamyl-tRNA amidotransferase;protein_id=PDP45881.1;transl_table=11 NSLS01000115.1 Genbank gene 7535 8908 . - . ID=gene-CLI77_10735;Name=CLI77_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10735 NSLS01000115.1 Protein Homology CDS 7535 8908 . - 0 ID=cds-PDP45882.1;Parent=gene-CLI77_10735;Dbxref=NCBI_GP:PDP45882.1;Name=PDP45882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585124.1;locus_tag=CLI77_10735;product=cell division protein FtsZ;protein_id=PDP45882.1;transl_table=11 NSLS01000115.1 Genbank gene 8911 10341 . - . ID=gene-CLI77_10740;Name=CLI77_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10740 NSLS01000115.1 Protein Homology CDS 8911 10341 . - 0 ID=cds-PDP45883.1;Parent=gene-CLI77_10740;Dbxref=NCBI_GP:PDP45883.1;Name=PDP45883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457662.1;locus_tag=CLI77_10740;product=cell division protein FtsA;protein_id=PDP45883.1;transl_table=11 NSLS01000115.1 Genbank gene 10399 11175 . - . ID=gene-CLI77_10745;Name=CLI77_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10745 NSLS01000115.1 Protein Homology CDS 10399 11175 . - 0 ID=cds-PDP45884.1;Parent=gene-CLI77_10745;Dbxref=NCBI_GP:PDP45884.1;Name=PDP45884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873944.1;locus_tag=CLI77_10745;product=cell division protein FtsQ;protein_id=PDP45884.1;transl_table=11 NSLS01000115.1 Genbank gene 11169 12539 . - . ID=gene-CLI77_10750;Name=CLI77_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10750 NSLS01000115.1 Protein Homology CDS 11169 12539 . - 0 ID=cds-PDP45885.1;Parent=gene-CLI77_10750;Dbxref=NCBI_GP:PDP45885.1;Name=PDP45885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873943.1;locus_tag=CLI77_10750;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=PDP45885.1;transl_table=11 NSLS01000115.1 Genbank gene 12539 13678 . - . ID=gene-CLI77_10755;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CLI77_10755 NSLS01000115.1 Protein Homology CDS 12539 13678 . - 0 ID=cds-PDP45886.1;Parent=gene-CLI77_10755;Dbxref=NCBI_GP:PDP45886.1;Name=PDP45886.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585120.1;locus_tag=CLI77_10755;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=PDP45886.1;transl_table=11 NSLS01000115.1 Genbank gene 13675 14931 . - . ID=gene-CLI77_10760;Name=CLI77_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10760 NSLS01000115.1 Protein Homology CDS 13675 14931 . - 0 ID=cds-PDP45887.1;Parent=gene-CLI77_10760;Dbxref=NCBI_GP:PDP45887.1;Name=PDP45887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457658.1;locus_tag=CLI77_10760;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=PDP45887.1;transl_table=11 NSLS01000115.1 Genbank gene 14943 16295 . - . ID=gene-CLI77_10765;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CLI77_10765 NSLS01000115.1 Protein Homology CDS 14943 16295 . - 0 ID=cds-PDP45888.1;Parent=gene-CLI77_10765;Dbxref=NCBI_GP:PDP45888.1;Name=PDP45888.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816334.1;locus_tag=CLI77_10765;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=PDP45888.1;transl_table=11 NSLS01000115.1 Genbank gene 16319 17578 . - . ID=gene-CLI77_10770;Name=CLI77_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10770 NSLS01000115.1 Protein Homology CDS 16319 17578 . - 0 ID=cds-PDP45889.1;Parent=gene-CLI77_10770;Dbxref=NCBI_GP:PDP45889.1;Name=PDP45889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585117.1;locus_tag=CLI77_10770;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=PDP45889.1;transl_table=11 NSLS01000115.1 Genbank gene 17593 19056 . - . ID=gene-CLI77_10775;Name=CLI77_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10775 NSLS01000115.1 Protein Homology CDS 17593 19056 . - 0 ID=cds-PDP45896.1;Parent=gene-CLI77_10775;Dbxref=NCBI_GP:PDP45896.1;Name=PDP45896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964990.1;locus_tag=CLI77_10775;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=PDP45896.1;transl_table=11 NSLS01000115.1 Genbank gene 19073 21274 . - . ID=gene-CLI77_10780;Name=CLI77_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10780 NSLS01000115.1 Protein Homology CDS 19073 21274 . - 0 ID=cds-PDP45890.1;Parent=gene-CLI77_10780;Dbxref=NCBI_GP:PDP45890.1;Name=PDP45890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964989.1;locus_tag=CLI77_10780;product=penicillin-binding protein;protein_id=PDP45890.1;transl_table=11 NSLS01000115.1 Genbank gene 21284 21757 . - . ID=gene-CLI77_10785;Name=CLI77_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10785 NSLS01000115.1 Protein Homology CDS 21284 21757 . - 0 ID=cds-PDP45891.1;Parent=gene-CLI77_10785;Dbxref=NCBI_GP:PDP45891.1;Name=PDP45891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816331.1;locus_tag=CLI77_10785;product=hypothetical protein;protein_id=PDP45891.1;transl_table=11 NSLS01000115.1 Genbank gene 21757 22692 . - . ID=gene-CLI77_10790;Name=CLI77_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10790 NSLS01000115.1 Protein Homology CDS 21757 22692 . - 0 ID=cds-PDP45892.1;Parent=gene-CLI77_10790;Dbxref=NCBI_GP:PDP45892.1;Name=PDP45892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457652.1;locus_tag=CLI77_10790;product=ribosomal RNA small subunit methyltransferase H;protein_id=PDP45892.1;transl_table=11 NSLS01000115.1 Genbank gene 23374 24387 . - . ID=gene-CLI77_10795;Name=CLI77_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10795 NSLS01000115.1 Protein Homology CDS 23374 24387 . - 0 ID=cds-PDP45893.1;Parent=gene-CLI77_10795;Dbxref=NCBI_GP:PDP45893.1;Name=PDP45893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457650.1;locus_tag=CLI77_10795;product=aspartate-semialdehyde dehydrogenase;protein_id=PDP45893.1;transl_table=11 NSLS01000115.1 Genbank gene 24583 26139 . + . ID=gene-CLI77_10800;Name=CLI77_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10800 NSLS01000115.1 Protein Homology CDS 24583 26139 . + 0 ID=cds-PDP45894.1;Parent=gene-CLI77_10800;Dbxref=NCBI_GP:PDP45894.1;Name=PDP45894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585110.1;locus_tag=CLI77_10800;product=hypothetical protein;protein_id=PDP45894.1;transl_table=11 NSLS01000115.1 Genbank gene 26272 26378 . + . ID=gene-CLI77_10805;Name=CLI77_10805;end_range=26378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10805;partial=true NSLS01000115.1 Protein Homology CDS 26272 26378 . + 0 ID=cds-PDP45895.1;Parent=gene-CLI77_10805;Dbxref=NCBI_GP:PDP45895.1;Name=PDP45895.1;end_range=26378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004330866.1;locus_tag=CLI77_10805;partial=true;product=elongation factor P;protein_id=PDP45895.1;transl_table=11 ##sequence-region NSLS01000011.1 1 67229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000011.1 Genbank region 1 67229 . + . ID=NSLS01000011.1:1..67229;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000011.1 Genbank gene 1 310 . + . ID=gene-CLI77_04470;Name=CLI77_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04470;partial=true;start_range=.,1 NSLS01000011.1 Protein Homology CDS 1 310 . + 1 ID=cds-PDP49555.1;Parent=gene-CLI77_04470;Dbxref=NCBI_GP:PDP49555.1;Name=PDP49555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_04470;partial=true;product=IS982 family transposase;protein_id=PDP49555.1;start_range=.,1;transl_table=11 NSLS01000011.1 Genbank gene 363 1022 . + . ID=gene-CLI77_04475;Name=CLI77_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04475 NSLS01000011.1 Protein Homology CDS 363 1022 . + 0 ID=cds-PDP49556.1;Parent=gene-CLI77_04475;Dbxref=NCBI_GP:PDP49556.1;Name=PDP49556.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05598.9;locus_tag=CLI77_04475;product=hypothetical protein;protein_id=PDP49556.1;transl_table=11 NSLS01000011.1 Genbank gene 938 1510 . + . ID=gene-CLI77_04480;Name=CLI77_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04480 NSLS01000011.1 Protein Homology CDS 938 1510 . + 0 ID=cds-PDP49557.1;Parent=gene-CLI77_04480;Dbxref=NCBI_GP:PDP49557.1;Name=PDP49557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01609.19;locus_tag=CLI77_04480;product=hypothetical protein;protein_id=PDP49557.1;transl_table=11 NSLS01000011.1 Genbank gene 1946 2554 . + . ID=gene-CLI77_04485;Name=CLI77_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04485 NSLS01000011.1 Protein Homology CDS 1946 2554 . + 0 ID=cds-PDP49558.1;Parent=gene-CLI77_04485;Dbxref=NCBI_GP:PDP49558.1;Name=PDP49558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457812.1;locus_tag=CLI77_04485;product=Holliday junction branch migration protein RuvA;protein_id=PDP49558.1;transl_table=11 NSLS01000011.1 Genbank gene 2594 10093 . + . ID=gene-CLI77_04490;Name=sprA;gbkey=Gene;gene=sprA;gene_biotype=protein_coding;locus_tag=CLI77_04490 NSLS01000011.1 Protein Homology CDS 2594 10093 . + 0 ID=cds-PDP49559.1;Parent=gene-CLI77_04490;Dbxref=NCBI_GP:PDP49559.1;Name=PDP49559.1;gbkey=CDS;gene=sprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457811.1;locus_tag=CLI77_04490;product=cell surface protein SprA;protein_id=PDP49559.1;transl_table=11 NSLS01000011.1 Genbank gene 10480 11526 . + . ID=gene-CLI77_04495;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CLI77_04495 NSLS01000011.1 Protein Homology CDS 10480 11526 . + 0 ID=cds-PDP49560.1;Parent=gene-CLI77_04495;Dbxref=NCBI_GP:PDP49560.1;Name=PDP49560.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964385.1;locus_tag=CLI77_04495;product=transcription antitermination factor NusB;protein_id=PDP49560.1;transl_table=11 NSLS01000011.1 Genbank gene 11564 12469 . + . ID=gene-CLI77_04500;Name=CLI77_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04500 NSLS01000011.1 Protein Homology CDS 11564 12469 . + 0 ID=cds-PDP49561.1;Parent=gene-CLI77_04500;Dbxref=NCBI_GP:PDP49561.1;Name=PDP49561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816485.1;locus_tag=CLI77_04500;product=diaminopimelate dehydrogenase;protein_id=PDP49561.1;transl_table=11 NSLS01000011.1 Genbank gene 12506 13357 . + . ID=gene-CLI77_04505;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CLI77_04505 NSLS01000011.1 Protein Homology CDS 12506 13357 . + 0 ID=cds-PDP49562.1;Parent=gene-CLI77_04505;Dbxref=NCBI_GP:PDP49562.1;Name=PDP49562.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816484.1;locus_tag=CLI77_04505;product=prolipoprotein diacylglyceryl transferase;protein_id=PDP49562.1;transl_table=11 NSLS01000011.1 Genbank gene 13388 14599 . + . ID=gene-CLI77_04510;Name=CLI77_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04510 NSLS01000011.1 Protein Homology CDS 13388 14599 . + 0 ID=cds-PDP49563.1;Parent=gene-CLI77_04510;Dbxref=NCBI_GP:PDP49563.1;Name=PDP49563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585341.1;locus_tag=CLI77_04510;product=FprA family A-type flavoprotein;protein_id=PDP49563.1;transl_table=11 NSLS01000011.1 Genbank gene 14638 15429 . + . ID=gene-CLI77_04515;Name=CLI77_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04515 NSLS01000011.1 Protein Homology CDS 14638 15429 . + 0 ID=cds-PDP49564.1;Parent=gene-CLI77_04515;Dbxref=NCBI_GP:PDP49564.1;Name=PDP49564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655151.1;locus_tag=CLI77_04515;product=glucosamine-6-phosphate deaminase;protein_id=PDP49564.1;transl_table=11 NSLS01000011.1 Genbank gene 15434 16783 . + . ID=gene-CLI77_04520;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CLI77_04520 NSLS01000011.1 Protein Homology CDS 15434 16783 . + 0 ID=cds-PDP49565.1;Parent=gene-CLI77_04520;Dbxref=NCBI_GP:PDP49565.1;Name=PDP49565.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585339.1;locus_tag=CLI77_04520;product=dihydrolipoyl dehydrogenase;protein_id=PDP49565.1;transl_table=11 NSLS01000011.1 Genbank gene 17018 17212 . + . ID=gene-CLI77_04525;Name=CLI77_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04525 NSLS01000011.1 Protein Homology CDS 17018 17212 . + 0 ID=cds-PDP49566.1;Parent=gene-CLI77_04525;Dbxref=NCBI_GP:PDP49566.1;Name=PDP49566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457247.1;locus_tag=CLI77_04525;product=hypothetical protein;protein_id=PDP49566.1;transl_table=11 NSLS01000011.1 Genbank gene 17488 18939 . + . ID=gene-CLI77_04530;Name=CLI77_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04530 NSLS01000011.1 Protein Homology CDS 17488 18939 . + 0 ID=cds-PDP49567.1;Parent=gene-CLI77_04530;Dbxref=NCBI_GP:PDP49567.1;Name=PDP49567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964392.1;locus_tag=CLI77_04530;product=tRNA nucleotidyltransferase;protein_id=PDP49567.1;transl_table=11 NSLS01000011.1 Genbank gene 18924 20483 . + . ID=gene-CLI77_04535;Name=CLI77_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04535 NSLS01000011.1 Protein Homology CDS 18924 20483 . + 0 ID=cds-PDP49568.1;Parent=gene-CLI77_04535;Dbxref=NCBI_GP:PDP49568.1;Name=PDP49568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457804.1;locus_tag=CLI77_04535;product=FAD-binding protein;protein_id=PDP49568.1;transl_table=11 NSLS01000011.1 Genbank gene 20549 20621 . + . ID=gene-CLI77_04540;Name=CLI77_04540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_04540 NSLS01000011.1 tRNAscan-SE tRNA 20549 20621 . + . ID=rna-CLI77_04540;Parent=gene-CLI77_04540;anticodon=(pos:20582..20584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04540;product=tRNA-Gly NSLS01000011.1 tRNAscan-SE exon 20549 20621 . + . ID=exon-CLI77_04540-1;Parent=rna-CLI77_04540;anticodon=(pos:20582..20584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04540;product=tRNA-Gly NSLS01000011.1 Genbank gene 20633 20818 . - . ID=gene-CLI77_04545;Name=CLI77_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04545 NSLS01000011.1 Protein Homology CDS 20633 20818 . - 0 ID=cds-PDP49569.1;Parent=gene-CLI77_04545;Dbxref=NCBI_GP:PDP49569.1;Name=PDP49569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875023.1;locus_tag=CLI77_04545;product=hypothetical protein;protein_id=PDP49569.1;transl_table=11 NSLS01000011.1 Genbank gene 21030 21227 . - . ID=gene-CLI77_04550;Name=CLI77_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04550 NSLS01000011.1 Protein Homology CDS 21030 21227 . - 0 ID=cds-PDP49570.1;Parent=gene-CLI77_04550;Dbxref=NCBI_GP:PDP49570.1;Name=PDP49570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI77_04550;product=hypothetical protein;protein_id=PDP49570.1;transl_table=11 NSLS01000011.1 Genbank gene 21880 24657 . + . ID=gene-CLI77_04555;Name=CLI77_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04555 NSLS01000011.1 Protein Homology CDS 21880 24657 . + 0 ID=cds-PDP49571.1;Parent=gene-CLI77_04555;Dbxref=NCBI_GP:PDP49571.1;Name=PDP49571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585334.1;locus_tag=CLI77_04555;product=leucine--tRNA ligase;protein_id=PDP49571.1;transl_table=11 NSLS01000011.1 Genbank gene 24756 25466 . - . ID=gene-CLI77_04560;Name=CLI77_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04560 NSLS01000011.1 Protein Homology CDS 24756 25466 . - 0 ID=cds-PDP49572.1;Parent=gene-CLI77_04560;Dbxref=NCBI_GP:PDP49572.1;Name=PDP49572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585333.1;locus_tag=CLI77_04560;product=BAX inhibitor (BI)-1/YccA family protein;protein_id=PDP49572.1;transl_table=11 NSLS01000011.1 Genbank gene 25514 27868 . - . ID=gene-CLI77_04565;Name=CLI77_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04565 NSLS01000011.1 Protein Homology CDS 25514 27868 . - 0 ID=cds-PDP49573.1;Parent=gene-CLI77_04565;Dbxref=NCBI_GP:PDP49573.1;Name=PDP49573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457798.1;locus_tag=CLI77_04565;product=penicillin-binding protein;protein_id=PDP49573.1;transl_table=11 NSLS01000011.1 Genbank gene 28024 30021 . - . ID=gene-CLI77_04570;Name=CLI77_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04570 NSLS01000011.1 Protein Homology CDS 28024 30021 . - 0 ID=cds-PDP49574.1;Parent=gene-CLI77_04570;Dbxref=NCBI_GP:PDP49574.1;Name=PDP49574.1;Note=class 3%3B catalyzes the formation of fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457797.1;locus_tag=CLI77_04570;product=fructose-bisphosphatase class III;protein_id=PDP49574.1;transl_table=11 NSLS01000011.1 Genbank gene 30615 31151 . + . ID=gene-CLI77_04575;Name=CLI77_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04575 NSLS01000011.1 Protein Homology CDS 30615 31151 . + 0 ID=cds-PDP49575.1;Parent=gene-CLI77_04575;Dbxref=NCBI_GP:PDP49575.1;Name=PDP49575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964399.1;locus_tag=CLI77_04575;product=hypoxanthine phosphoribosyltransferase;protein_id=PDP49575.1;transl_table=11 NSLS01000011.1 Genbank gene 31152 31736 . + . ID=gene-CLI77_04580;Name=CLI77_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04580 NSLS01000011.1 Protein Homology CDS 31152 31736 . + 0 ID=cds-PDP49576.1;Parent=gene-CLI77_04580;Dbxref=NCBI_GP:PDP49576.1;Name=PDP49576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816474.1;locus_tag=CLI77_04580;product=adenylate kinase;protein_id=PDP49576.1;transl_table=11 NSLS01000011.1 Genbank gene 31746 32930 . + . ID=gene-CLI77_04585;Name=CLI77_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04585 NSLS01000011.1 Protein Homology CDS 31746 32930 . + 0 ID=cds-PDP49577.1;Parent=gene-CLI77_04585;Dbxref=NCBI_GP:PDP49577.1;Name=PDP49577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964401.1;locus_tag=CLI77_04585;product=GTPase ObgE;protein_id=PDP49577.1;transl_table=11 NSLS01000011.1 Genbank gene 32911 33627 . + . ID=gene-CLI77_04590;Name=CLI77_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04590 NSLS01000011.1 Protein Homology CDS 32911 33627 . + 0 ID=cds-PDP49578.1;Parent=gene-CLI77_04590;Dbxref=NCBI_GP:PDP49578.1;Name=PDP49578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585323.1;locus_tag=CLI77_04590;product=hypothetical protein;protein_id=PDP49578.1;transl_table=11 NSLS01000011.1 Genbank gene 33668 36286 . + . ID=gene-CLI77_04595;Name=CLI77_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04595 NSLS01000011.1 Protein Homology CDS 33668 36286 . + 0 ID=cds-PDP49579.1;Parent=gene-CLI77_04595;Dbxref=NCBI_GP:PDP49579.1;Name=PDP49579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585322.1;locus_tag=CLI77_04595;product=hypothetical protein;protein_id=PDP49579.1;transl_table=11 NSLS01000011.1 Genbank pseudogene 36362 36605 . - . ID=gene-CLI77_04600;Name=CLI77_04600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04600;pseudo=true NSLS01000011.1 Protein Homology CDS 36362 36605 . - 0 ID=cds-CLI77_04600;Parent=gene-CLI77_04600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873930.1;locus_tag=CLI77_04600;product=T9SS C-terminal target domain-containing protein;pseudo=true;transl_table=11 NSLS01000011.1 Genbank gene 36738 37430 . + . ID=gene-CLI77_04605;Name=CLI77_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04605 NSLS01000011.1 Protein Homology CDS 36738 37430 . + 0 ID=cds-PDP49580.1;Parent=gene-CLI77_04605;Dbxref=NCBI_GP:PDP49580.1;Name=PDP49580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457793.1;locus_tag=CLI77_04605;product=energy transducer TonB;protein_id=PDP49580.1;transl_table=11 NSLS01000011.1 Genbank gene 37602 38579 . + . ID=gene-CLI77_04610;Name=CLI77_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04610 NSLS01000011.1 Protein Homology CDS 37602 38579 . + 0 ID=cds-PDP49581.1;Parent=gene-CLI77_04610;Dbxref=NCBI_GP:PDP49581.1;Name=PDP49581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585319.1;locus_tag=CLI77_04610;product=polyprenyl synthetase family protein;protein_id=PDP49581.1;transl_table=11 NSLS01000011.1 Genbank gene 38650 39453 . + . ID=gene-CLI77_04615;Name=CLI77_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04615 NSLS01000011.1 Protein Homology CDS 38650 39453 . + 0 ID=cds-PDP49582.1;Parent=gene-CLI77_04615;Dbxref=NCBI_GP:PDP49582.1;Name=PDP49582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585318.1;locus_tag=CLI77_04615;product=TatD family deoxyribonuclease;protein_id=PDP49582.1;transl_table=11 NSLS01000011.1 Genbank gene 39646 39733 . + . ID=gene-CLI77_04620;Name=CLI77_04620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_04620 NSLS01000011.1 tRNAscan-SE tRNA 39646 39733 . + . ID=rna-CLI77_04620;Parent=gene-CLI77_04620;anticodon=(pos:39680..39682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04620;product=tRNA-Ser NSLS01000011.1 tRNAscan-SE exon 39646 39733 . + . ID=exon-CLI77_04620-1;Parent=rna-CLI77_04620;anticodon=(pos:39680..39682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04620;product=tRNA-Ser NSLS01000011.1 Genbank gene 39801 40613 . + . ID=gene-CLI77_04625;Name=CLI77_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04625 NSLS01000011.1 Protein Homology CDS 39801 40613 . + 0 ID=cds-PDP49583.1;Parent=gene-CLI77_04625;Dbxref=NCBI_GP:PDP49583.1;Name=PDP49583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005648199.1;locus_tag=CLI77_04625;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP49583.1;transl_table=11 NSLS01000011.1 Genbank gene 40622 41092 . + . ID=gene-CLI77_04630;Name=CLI77_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04630 NSLS01000011.1 Protein Homology CDS 40622 41092 . + 0 ID=cds-PDP49584.1;Parent=gene-CLI77_04630;Dbxref=NCBI_GP:PDP49584.1;Name=PDP49584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965598.1;locus_tag=CLI77_04630;product=hypothetical protein;protein_id=PDP49584.1;transl_table=11 NSLS01000011.1 Genbank gene 41128 41742 . + . ID=gene-CLI77_04635;Name=CLI77_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04635 NSLS01000011.1 Protein Homology CDS 41128 41742 . + 0 ID=cds-PDP49585.1;Parent=gene-CLI77_04635;Dbxref=NCBI_GP:PDP49585.1;Name=PDP49585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585315.1;locus_tag=CLI77_04635;product=biopolymer transporter ExbD;protein_id=PDP49585.1;transl_table=11 NSLS01000011.1 Genbank gene 41758 42231 . + . ID=gene-CLI77_04640;Name=CLI77_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04640 NSLS01000011.1 Protein Homology CDS 41758 42231 . + 0 ID=cds-PDP49586.1;Parent=gene-CLI77_04640;Dbxref=NCBI_GP:PDP49586.1;Name=PDP49586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585314.1;locus_tag=CLI77_04640;product=biopolymer transporter ExbD;protein_id=PDP49586.1;transl_table=11 NSLS01000011.1 Genbank gene 42462 43181 . + . ID=gene-CLI77_04645;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CLI77_04645 NSLS01000011.1 Protein Homology CDS 42462 43181 . + 0 ID=cds-PDP49587.1;Parent=gene-CLI77_04645;Dbxref=NCBI_GP:PDP49587.1;Name=PDP49587.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457790.1;locus_tag=CLI77_04645;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=PDP49587.1;transl_table=11 NSLS01000011.1 Genbank gene 43272 44138 . + . ID=gene-CLI77_04650;Name=CLI77_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04650 NSLS01000011.1 Protein Homology CDS 43272 44138 . + 0 ID=cds-PDP49588.1;Parent=gene-CLI77_04650;Dbxref=NCBI_GP:PDP49588.1;Name=PDP49588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965602.1;locus_tag=CLI77_04650;product=electron transfer flavoprotein subunit beta;protein_id=PDP49588.1;transl_table=11 NSLS01000011.1 Genbank gene 44147 45166 . + . ID=gene-CLI77_04655;Name=CLI77_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04655 NSLS01000011.1 Protein Homology CDS 44147 45166 . + 0 ID=cds-PDP49589.1;Parent=gene-CLI77_04655;Dbxref=NCBI_GP:PDP49589.1;Name=PDP49589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100651.1;locus_tag=CLI77_04655;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=PDP49589.1;transl_table=11 NSLS01000011.1 Genbank gene 45178 46899 . + . ID=gene-CLI77_04660;Name=CLI77_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04660 NSLS01000011.1 Protein Homology CDS 45178 46899 . + 0 ID=cds-PDP49590.1;Parent=gene-CLI77_04660;Dbxref=NCBI_GP:PDP49590.1;Name=PDP49590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965604.1;locus_tag=CLI77_04660;product=acyl-CoA dehydrogenase;protein_id=PDP49590.1;transl_table=11 NSLS01000011.1 Genbank gene 47044 47121 . - . ID=gene-CLI77_04665;Name=CLI77_04665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_04665 NSLS01000011.1 tRNAscan-SE tRNA 47044 47121 . - . ID=rna-CLI77_04665;Parent=gene-CLI77_04665;anticodon=(pos:complement(47084..47086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04665;product=tRNA-Pro NSLS01000011.1 tRNAscan-SE exon 47044 47121 . - . ID=exon-CLI77_04665-1;Parent=rna-CLI77_04665;anticodon=(pos:complement(47084..47086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_04665;product=tRNA-Pro NSLS01000011.1 Genbank gene 47390 48634 . + . ID=gene-CLI77_04670;Name=CLI77_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04670 NSLS01000011.1 Protein Homology CDS 47390 48634 . + 0 ID=cds-PDP49591.1;Parent=gene-CLI77_04670;Dbxref=NCBI_GP:PDP49591.1;Name=PDP49591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585308.1;locus_tag=CLI77_04670;product=hypothetical protein;protein_id=PDP49591.1;transl_table=11 NSLS01000011.1 Genbank gene 49277 49516 . + . ID=gene-CLI77_04675;Name=CLI77_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04675 NSLS01000011.1 GeneMarkS+ CDS 49277 49516 . + 0 ID=cds-PDP49592.1;Parent=gene-CLI77_04675;Dbxref=NCBI_GP:PDP49592.1;Name=PDP49592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04675;product=hypothetical protein;protein_id=PDP49592.1;transl_table=11 NSLS01000011.1 Genbank gene 49910 50863 . + . ID=gene-CLI77_04680;Name=CLI77_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04680 NSLS01000011.1 Protein Homology CDS 49910 50863 . + 0 ID=cds-PDP49593.1;Parent=gene-CLI77_04680;Dbxref=NCBI_GP:PDP49593.1;Name=PDP49593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003009418.1;locus_tag=CLI77_04680;product=ATP-binding protein;protein_id=PDP49593.1;transl_table=11 NSLS01000011.1 Genbank gene 50872 53571 . + . ID=gene-CLI77_04685;Name=CLI77_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04685 NSLS01000011.1 Protein Homology CDS 50872 53571 . + 0 ID=cds-PDP49594.1;Parent=gene-CLI77_04685;Dbxref=NCBI_GP:PDP49594.1;Name=PDP49594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00082.20;locus_tag=CLI77_04685;product=hypothetical protein;protein_id=PDP49594.1;transl_table=11 NSLS01000011.1 Genbank gene 53602 53937 . + . ID=gene-CLI77_04690;Name=CLI77_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04690 NSLS01000011.1 GeneMarkS+ CDS 53602 53937 . + 0 ID=cds-PDP49595.1;Parent=gene-CLI77_04690;Dbxref=NCBI_GP:PDP49595.1;Name=PDP49595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04690;product=hypothetical protein;protein_id=PDP49595.1;transl_table=11 NSLS01000011.1 Genbank gene 54120 56261 . + . ID=gene-CLI77_04695;Name=CLI77_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04695 NSLS01000011.1 Protein Homology CDS 54120 56261 . + 0 ID=cds-PDP49596.1;Parent=gene-CLI77_04695;Dbxref=NCBI_GP:PDP49596.1;Name=PDP49596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816461.1;locus_tag=CLI77_04695;product=hypothetical protein;protein_id=PDP49596.1;transl_table=11 NSLS01000011.1 Genbank gene 56439 57545 . + . ID=gene-CLI77_04700;Name=CLI77_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04700 NSLS01000011.1 Protein Homology CDS 56439 57545 . + 0 ID=cds-PDP49597.1;Parent=gene-CLI77_04700;Dbxref=NCBI_GP:PDP49597.1;Name=PDP49597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457784.1;locus_tag=CLI77_04700;product=DUF2891 domain-containing protein;protein_id=PDP49597.1;transl_table=11 NSLS01000011.1 Genbank gene 57570 60263 . + . ID=gene-CLI77_04705;Name=CLI77_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04705 NSLS01000011.1 Protein Homology CDS 57570 60263 . + 0 ID=cds-PDP49598.1;Parent=gene-CLI77_04705;Dbxref=NCBI_GP:PDP49598.1;Name=PDP49598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585304.1;locus_tag=CLI77_04705;product=4-alpha-glucanotransferase;protein_id=PDP49598.1;transl_table=11 NSLS01000011.1 Genbank gene 60415 62646 . + . ID=gene-CLI77_04710;Name=CLI77_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04710 NSLS01000011.1 Protein Homology CDS 60415 62646 . + 0 ID=cds-PDP49599.1;Parent=gene-CLI77_04710;Dbxref=NCBI_GP:PDP49599.1;Name=PDP49599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965182.1;locus_tag=CLI77_04710;product=polyribonucleotide nucleotidyltransferase;protein_id=PDP49599.1;transl_table=11 NSLS01000011.1 Genbank gene 63991 65367 . - . ID=gene-CLI77_04715;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CLI77_04715 NSLS01000011.1 Protein Homology CDS 63991 65367 . - 0 ID=cds-PDP49602.1;Parent=gene-CLI77_04715;Dbxref=NCBI_GP:PDP49602.1;Name=PDP49602.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873932.1;locus_tag=CLI77_04715;product=trigger factor;protein_id=PDP49602.1;transl_table=11 NSLS01000011.1 Genbank gene 65893 66087 . - . ID=gene-CLI77_04720;Name=CLI77_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04720 NSLS01000011.1 Protein Homology CDS 65893 66087 . - 0 ID=cds-PDP49600.1;Parent=gene-CLI77_04720;Dbxref=NCBI_GP:PDP49600.1;Name=PDP49600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816080.1;locus_tag=CLI77_04720;product=hypothetical protein;protein_id=PDP49600.1;transl_table=11 NSLS01000011.1 Genbank gene 66100 67185 . - . ID=gene-CLI77_04725;Name=CLI77_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04725 NSLS01000011.1 Protein Homology CDS 66100 67185 . - 0 ID=cds-PDP49601.1;Parent=gene-CLI77_04725;Dbxref=NCBI_GP:PDP49601.1;Name=PDP49601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_04725;product=IS5/IS1182 family transposase;protein_id=PDP49601.1;transl_table=11 ##sequence-region NSLS01000012.1 1 60756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000012.1 Genbank region 1 60756 . + . ID=NSLS01000012.1:1..60756;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000012.1 Genbank pseudogene 40 129 . + . ID=gene-CLI77_04730;Name=CLI77_04730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04730;pseudo=true NSLS01000012.1 Protein Homology CDS 40 129 . + 0 ID=cds-CLI77_04730;Parent=gene-CLI77_04730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004294387.1;locus_tag=CLI77_04730;product=conjugative transposon protein TraN;pseudo=true;transl_table=11 NSLS01000012.1 Genbank pseudogene 129 1832 . + . ID=gene-CLI77_04735;Name=CLI77_04735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04735;pseudo=true NSLS01000012.1 Protein Homology CDS 129 1832 . + 0 ID=cds-CLI77_04735;Parent=gene-CLI77_04735;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584872.1;locus_tag=CLI77_04735;product=DNA topoisomerase III;pseudo=true;transl_table=11 NSLS01000012.1 Genbank gene 1865 8098 . + . ID=gene-CLI77_04740;Name=CLI77_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04740 NSLS01000012.1 Protein Homology CDS 1865 8098 . + 0 ID=cds-PDP49492.1;Parent=gene-CLI77_04740;Dbxref=NCBI_GP:PDP49492.1;Name=PDP49492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584873.1;locus_tag=CLI77_04740;product=helicase;protein_id=PDP49492.1;transl_table=11 NSLS01000012.1 Genbank gene 8208 9206 . - . ID=gene-CLI77_04745;Name=CLI77_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04745 NSLS01000012.1 Protein Homology CDS 8208 9206 . - 0 ID=cds-PDP49493.1;Parent=gene-CLI77_04745;Dbxref=NCBI_GP:PDP49493.1;Name=PDP49493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224719.1;locus_tag=CLI77_04745;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=PDP49493.1;transl_table=11 NSLS01000012.1 Genbank gene 9191 9898 . - . ID=gene-CLI77_04750;Name=CLI77_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04750 NSLS01000012.1 Protein Homology CDS 9191 9898 . - 0 ID=cds-PDP49494.1;Parent=gene-CLI77_04750;Dbxref=NCBI_GP:PDP49494.1;Name=PDP49494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874356.1;locus_tag=CLI77_04750;product=hypothetical protein;protein_id=PDP49494.1;transl_table=11 NSLS01000012.1 Genbank gene 10142 11074 . - . ID=gene-CLI77_04755;Name=CLI77_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04755 NSLS01000012.1 Protein Homology CDS 10142 11074 . - 0 ID=cds-PDP49495.1;Parent=gene-CLI77_04755;Dbxref=NCBI_GP:PDP49495.1;Name=PDP49495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584877.1;locus_tag=CLI77_04755;product=CAAX protease;protein_id=PDP49495.1;transl_table=11 NSLS01000012.1 Genbank gene 11233 11541 . - . ID=gene-CLI77_04760;Name=CLI77_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04760 NSLS01000012.1 Protein Homology CDS 11233 11541 . - 0 ID=cds-PDP49496.1;Parent=gene-CLI77_04760;Dbxref=NCBI_GP:PDP49496.1;Name=PDP49496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584878.1;locus_tag=CLI77_04760;product=DNA-binding protein;protein_id=PDP49496.1;transl_table=11 NSLS01000012.1 Genbank gene 11529 13589 . - . ID=gene-CLI77_04765;Name=CLI77_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04765 NSLS01000012.1 Protein Homology CDS 11529 13589 . - 0 ID=cds-PDP49497.1;Parent=gene-CLI77_04765;Dbxref=NCBI_GP:PDP49497.1;Name=PDP49497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671971.1;locus_tag=CLI77_04765;product=bifunctional DNA primase/helicase;protein_id=PDP49497.1;transl_table=11 NSLS01000012.1 Genbank gene 13592 13966 . - . ID=gene-CLI77_04770;Name=CLI77_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04770 NSLS01000012.1 Protein Homology CDS 13592 13966 . - 0 ID=cds-PDP49540.1;Parent=gene-CLI77_04770;Dbxref=NCBI_GP:PDP49540.1;Name=PDP49540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364333.1;locus_tag=CLI77_04770;product=DNA-binding protein;protein_id=PDP49540.1;transl_table=11 NSLS01000012.1 Genbank gene 13969 14304 . - . ID=gene-CLI77_04775;Name=CLI77_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04775 NSLS01000012.1 Protein Homology CDS 13969 14304 . - 0 ID=cds-PDP49498.1;Parent=gene-CLI77_04775;Dbxref=NCBI_GP:PDP49498.1;Name=PDP49498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004384066.1;locus_tag=CLI77_04775;product=XRE family transcriptional regulator;protein_id=PDP49498.1;transl_table=11 NSLS01000012.1 Genbank gene 14899 15594 . - . ID=gene-CLI77_04780;Name=CLI77_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04780 NSLS01000012.1 Protein Homology CDS 14899 15594 . - 0 ID=cds-PDP49499.1;Parent=gene-CLI77_04780;Dbxref=NCBI_GP:PDP49499.1;Name=PDP49499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005815637.1;locus_tag=CLI77_04780;product=Appr-1-p processing protein;protein_id=PDP49499.1;transl_table=11 NSLS01000012.1 Genbank gene 15591 20975 . - . ID=gene-CLI77_04785;Name=CLI77_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04785 NSLS01000012.1 Protein Homology CDS 15591 20975 . - 0 ID=cds-PDP49500.1;Parent=gene-CLI77_04785;Dbxref=NCBI_GP:PDP49500.1;Name=PDP49500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007215916.1;locus_tag=CLI77_04785;product=hypothetical protein;protein_id=PDP49500.1;transl_table=11 NSLS01000012.1 Genbank gene 20965 25275 . - . ID=gene-CLI77_04790;Name=CLI77_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04790 NSLS01000012.1 Protein Homology CDS 20965 25275 . - 0 ID=cds-PDP49501.1;Parent=gene-CLI77_04790;Dbxref=NCBI_GP:PDP49501.1;Name=PDP49501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008021397.1;locus_tag=CLI77_04790;product=hypothetical protein;protein_id=PDP49501.1;transl_table=11 NSLS01000012.1 Genbank gene 25383 25586 . - . ID=gene-CLI77_04795;Name=CLI77_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04795 NSLS01000012.1 Protein Homology CDS 25383 25586 . - 0 ID=cds-PDP49502.1;Parent=gene-CLI77_04795;Dbxref=NCBI_GP:PDP49502.1;Name=PDP49502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845940.1;locus_tag=CLI77_04795;product=transcriptional regulator;protein_id=PDP49502.1;transl_table=11 NSLS01000012.1 Genbank gene 25943 26251 . + . ID=gene-CLI77_04800;Name=CLI77_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04800 NSLS01000012.1 Protein Homology CDS 25943 26251 . + 0 ID=cds-PDP49503.1;Parent=gene-CLI77_04800;Dbxref=NCBI_GP:PDP49503.1;Name=PDP49503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352487.1;locus_tag=CLI77_04800;product=hypothetical protein;protein_id=PDP49503.1;transl_table=11 NSLS01000012.1 Genbank gene 26248 27300 . + . ID=gene-CLI77_04805;Name=CLI77_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04805 NSLS01000012.1 Protein Homology CDS 26248 27300 . + 0 ID=cds-PDP49504.1;Parent=gene-CLI77_04805;Dbxref=NCBI_GP:PDP49504.1;Name=PDP49504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009011822.1;locus_tag=CLI77_04805;product=mobilization protein;protein_id=PDP49504.1;transl_table=11 NSLS01000012.1 Genbank gene 27483 28373 . + . ID=gene-CLI77_04810;Name=CLI77_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04810 NSLS01000012.1 Protein Homology CDS 27483 28373 . + 0 ID=cds-PDP49505.1;Parent=gene-CLI77_04810;Dbxref=NCBI_GP:PDP49505.1;Name=PDP49505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005845937.1;locus_tag=CLI77_04810;product=mobilization protein;protein_id=PDP49505.1;transl_table=11 NSLS01000012.1 Genbank gene 28479 28826 . + . ID=gene-CLI77_04815;Name=CLI77_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04815 NSLS01000012.1 Protein Homology CDS 28479 28826 . + 0 ID=cds-PDP49506.1;Parent=gene-CLI77_04815;Dbxref=NCBI_GP:PDP49506.1;Name=PDP49506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336065.1;locus_tag=CLI77_04815;product=plasmid mobilization relaxosome protein MobC;protein_id=PDP49506.1;transl_table=11 NSLS01000012.1 Genbank gene 28823 29749 . + . ID=gene-CLI77_04820;Name=CLI77_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04820 NSLS01000012.1 Protein Homology CDS 28823 29749 . + 0 ID=cds-PDP49507.1;Parent=gene-CLI77_04820;Dbxref=NCBI_GP:PDP49507.1;Name=PDP49507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435689.1;locus_tag=CLI77_04820;product=mobilization protein;protein_id=PDP49507.1;transl_table=11 NSLS01000012.1 Genbank gene 29771 30430 . + . ID=gene-CLI77_04825;Name=CLI77_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04825 NSLS01000012.1 Protein Homology CDS 29771 30430 . + 0 ID=cds-PDP49508.1;Parent=gene-CLI77_04825;Dbxref=NCBI_GP:PDP49508.1;Name=PDP49508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007410943.1;locus_tag=CLI77_04825;product=hypothetical protein;protein_id=PDP49508.1;transl_table=11 NSLS01000012.1 Genbank gene 30605 31966 . - . ID=gene-CLI77_04830;Name=CLI77_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04830 NSLS01000012.1 GeneMarkS+ CDS 30605 31966 . - 0 ID=cds-PDP49509.1;Parent=gene-CLI77_04830;Dbxref=NCBI_GP:PDP49509.1;Name=PDP49509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04830;product=hypothetical protein;protein_id=PDP49509.1;transl_table=11 NSLS01000012.1 Genbank gene 32079 33353 . - . ID=gene-CLI77_04835;Name=CLI77_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04835 NSLS01000012.1 Protein Homology CDS 32079 33353 . - 0 ID=cds-PDP49510.1;Parent=gene-CLI77_04835;Dbxref=NCBI_GP:PDP49510.1;Name=PDP49510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008451407.1;locus_tag=CLI77_04835;product=hypothetical protein;protein_id=PDP49510.1;transl_table=11 NSLS01000012.1 Genbank gene 33366 34652 . - . ID=gene-CLI77_04840;Name=CLI77_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04840 NSLS01000012.1 Protein Homology CDS 33366 34652 . - 0 ID=cds-PDP49511.1;Parent=gene-CLI77_04840;Dbxref=NCBI_GP:PDP49511.1;Name=PDP49511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358726.1;locus_tag=CLI77_04840;product=integrase;protein_id=PDP49511.1;transl_table=11 NSLS01000012.1 Genbank pseudogene 35134 36306 . + . ID=gene-CLI77_04845;Name=CLI77_04845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04845;pseudo=true NSLS01000012.1 Protein Homology CDS 35134 36306 . + 0 ID=cds-CLI77_04845;Parent=gene-CLI77_04845;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911220.1;locus_tag=CLI77_04845;product=recombinase;pseudo=true;transl_table=11 NSLS01000012.1 Genbank gene 36452 36910 . + . ID=gene-CLI77_04850;Name=CLI77_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04850 NSLS01000012.1 Protein Homology CDS 36452 36910 . + 0 ID=cds-PDP49541.1;Parent=gene-CLI77_04850;Dbxref=NCBI_GP:PDP49541.1;Name=PDP49541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585420.1;locus_tag=CLI77_04850;product=DUF1896 domain-containing protein;protein_id=PDP49541.1;transl_table=11 NSLS01000012.1 Genbank gene 37268 37627 . + . ID=gene-CLI77_04855;Name=CLI77_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04855 NSLS01000012.1 Protein Homology CDS 37268 37627 . + 0 ID=cds-PDP49512.1;Parent=gene-CLI77_04855;Dbxref=NCBI_GP:PDP49512.1;Name=PDP49512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956319.1;locus_tag=CLI77_04855;product=hypothetical protein;protein_id=PDP49512.1;transl_table=11 NSLS01000012.1 Genbank gene 37634 38155 . + . ID=gene-CLI77_04860;Name=CLI77_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04860 NSLS01000012.1 Protein Homology CDS 37634 38155 . + 0 ID=cds-PDP49513.1;Parent=gene-CLI77_04860;Dbxref=NCBI_GP:PDP49513.1;Name=PDP49513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874665.1;locus_tag=CLI77_04860;product=hypothetical protein;protein_id=PDP49513.1;transl_table=11 NSLS01000012.1 Genbank gene 38168 38395 . + . ID=gene-CLI77_04865;Name=CLI77_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04865 NSLS01000012.1 Protein Homology CDS 38168 38395 . + 0 ID=cds-PDP49542.1;Parent=gene-CLI77_04865;Dbxref=NCBI_GP:PDP49542.1;Name=PDP49542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874553.1;locus_tag=CLI77_04865;product=hypothetical protein;protein_id=PDP49542.1;transl_table=11 NSLS01000012.1 Genbank gene 38418 38699 . + . ID=gene-CLI77_04870;Name=CLI77_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04870 NSLS01000012.1 Protein Homology CDS 38418 38699 . + 0 ID=cds-PDP49514.1;Parent=gene-CLI77_04870;Dbxref=NCBI_GP:PDP49514.1;Name=PDP49514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585415.1;locus_tag=CLI77_04870;product=hypothetical protein;protein_id=PDP49514.1;transl_table=11 NSLS01000012.1 Genbank gene 38712 39014 . + . ID=gene-CLI77_04875;Name=CLI77_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04875 NSLS01000012.1 Protein Homology CDS 38712 39014 . + 0 ID=cds-PDP49515.1;Parent=gene-CLI77_04875;Dbxref=NCBI_GP:PDP49515.1;Name=PDP49515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457825.1;locus_tag=CLI77_04875;product=hypothetical protein;protein_id=PDP49515.1;transl_table=11 NSLS01000012.1 Genbank gene 39027 39449 . + . ID=gene-CLI77_04880;Name=CLI77_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04880 NSLS01000012.1 Protein Homology CDS 39027 39449 . + 0 ID=cds-PDP49543.1;Parent=gene-CLI77_04880;Dbxref=NCBI_GP:PDP49543.1;Name=PDP49543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010801810.1;locus_tag=CLI77_04880;product=PcfK-like protein;protein_id=PDP49543.1;transl_table=11 NSLS01000012.1 Genbank gene 39461 40732 . + . ID=gene-CLI77_04885;Name=CLI77_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04885 NSLS01000012.1 Protein Homology CDS 39461 40732 . + 0 ID=cds-PDP49516.1;Parent=gene-CLI77_04885;Dbxref=NCBI_GP:PDP49516.1;Name=PDP49516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004360066.1;locus_tag=CLI77_04885;product=PcfJ-like protein;protein_id=PDP49516.1;transl_table=11 NSLS01000012.1 Genbank pseudogene 40757 41012 . + . ID=gene-CLI77_04890;Name=CLI77_04890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_04890;pseudo=true NSLS01000012.1 Protein Homology CDS 40757 41012 . + 0 ID=cds-CLI77_04890;Parent=gene-CLI77_04890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1;locus_tag=CLI77_04890;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000012.1 Genbank gene 41017 41235 . + . ID=gene-CLI77_04895;Name=CLI77_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04895 NSLS01000012.1 Protein Homology CDS 41017 41235 . + 0 ID=cds-PDP49517.1;Parent=gene-CLI77_04895;Dbxref=NCBI_GP:PDP49517.1;Name=PDP49517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847779.1;locus_tag=CLI77_04895;product=hypothetical protein;protein_id=PDP49517.1;transl_table=11 NSLS01000012.1 Genbank gene 41474 42118 . + . ID=gene-CLI77_04900;Name=CLI77_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04900 NSLS01000012.1 Protein Homology CDS 41474 42118 . + 0 ID=cds-PDP49518.1;Parent=gene-CLI77_04900;Dbxref=NCBI_GP:PDP49518.1;Name=PDP49518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816567.1;locus_tag=CLI77_04900;product=hypothetical protein;protein_id=PDP49518.1;transl_table=11 NSLS01000012.1 Genbank gene 42115 42687 . + . ID=gene-CLI77_04905;Name=CLI77_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04905 NSLS01000012.1 Protein Homology CDS 42115 42687 . + 0 ID=cds-PDP49519.1;Parent=gene-CLI77_04905;Dbxref=NCBI_GP:PDP49519.1;Name=PDP49519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816566.1;locus_tag=CLI77_04905;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=PDP49519.1;transl_table=11 NSLS01000012.1 Genbank gene 42702 43316 . + . ID=gene-CLI77_04910;Name=CLI77_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04910 NSLS01000012.1 Protein Homology CDS 42702 43316 . + 0 ID=cds-PDP49520.1;Parent=gene-CLI77_04910;Dbxref=NCBI_GP:PDP49520.1;Name=PDP49520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226318.1;locus_tag=CLI77_04910;product=SAM-dependent methyltransferase;protein_id=PDP49520.1;transl_table=11 NSLS01000012.1 Genbank gene 43357 43872 . + . ID=gene-CLI77_04915;Name=CLI77_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04915 NSLS01000012.1 Protein Homology CDS 43357 43872 . + 0 ID=cds-PDP49544.1;Parent=gene-CLI77_04915;Dbxref=NCBI_GP:PDP49544.1;Name=PDP49544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226317.1;locus_tag=CLI77_04915;product=hypothetical protein;protein_id=PDP49544.1;transl_table=11 NSLS01000012.1 Genbank gene 43966 44433 . + . ID=gene-CLI77_04920;Name=CLI77_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04920 NSLS01000012.1 Protein Homology CDS 43966 44433 . + 0 ID=cds-PDP49521.1;Parent=gene-CLI77_04920;Dbxref=NCBI_GP:PDP49521.1;Name=PDP49521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874616.1;locus_tag=CLI77_04920;product=PH domain protein;protein_id=PDP49521.1;transl_table=11 NSLS01000012.1 Genbank gene 44632 45096 . - . ID=gene-CLI77_04925;Name=CLI77_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04925 NSLS01000012.1 Protein Homology CDS 44632 45096 . - 0 ID=cds-PDP49522.1;Parent=gene-CLI77_04925;Dbxref=NCBI_GP:PDP49522.1;Name=PDP49522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874645.1;locus_tag=CLI77_04925;product=conjugal transfer protein;protein_id=PDP49522.1;transl_table=11 NSLS01000012.1 Genbank gene 45109 45687 . - . ID=gene-CLI77_04930;Name=CLI77_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04930 NSLS01000012.1 Protein Homology CDS 45109 45687 . - 0 ID=cds-PDP49523.1;Parent=gene-CLI77_04930;Dbxref=NCBI_GP:PDP49523.1;Name=PDP49523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226304.1;locus_tag=CLI77_04930;product=conjugal transfer protein TraO;protein_id=PDP49523.1;transl_table=11 NSLS01000012.1 Genbank gene 45681 46706 . - . ID=gene-CLI77_04935;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI77_04935 NSLS01000012.1 Protein Homology CDS 45681 46706 . - 0 ID=cds-PDP49524.1;Parent=gene-CLI77_04935;Dbxref=NCBI_GP:PDP49524.1;Name=PDP49524.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1;locus_tag=CLI77_04935;product=conjugative transposon protein TraN;protein_id=PDP49524.1;transl_table=11 NSLS01000012.1 Genbank gene 46729 48090 . - . ID=gene-CLI77_04940;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI77_04940 NSLS01000012.1 Protein Homology CDS 46729 48090 . - 0 ID=cds-PDP49525.1;Parent=gene-CLI77_04940;Dbxref=NCBI_GP:PDP49525.1;Name=PDP49525.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816546.1;locus_tag=CLI77_04940;product=conjugative transposon protein TraM;protein_id=PDP49525.1;transl_table=11 NSLS01000012.1 Genbank gene 48080 48367 . - . ID=gene-CLI77_04945;Name=CLI77_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04945 NSLS01000012.1 Protein Homology CDS 48080 48367 . - 0 ID=cds-PDP49526.1;Parent=gene-CLI77_04945;Dbxref=NCBI_GP:PDP49526.1;Name=PDP49526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585400.1;locus_tag=CLI77_04945;product=hypothetical protein;protein_id=PDP49526.1;transl_table=11 NSLS01000012.1 Genbank gene 48364 48987 . - . ID=gene-CLI77_04950;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CLI77_04950 NSLS01000012.1 Protein Homology CDS 48364 48987 . - 0 ID=cds-PDP49527.1;Parent=gene-CLI77_04950;Dbxref=NCBI_GP:PDP49527.1;Name=PDP49527.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816544.1;locus_tag=CLI77_04950;product=conjugative transposon protein TraK;protein_id=PDP49527.1;transl_table=11 NSLS01000012.1 Genbank gene 48999 50105 . - . ID=gene-CLI77_04955;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CLI77_04955 NSLS01000012.1 Protein Homology CDS 48999 50105 . - 0 ID=cds-PDP49528.1;Parent=gene-CLI77_04955;Dbxref=NCBI_GP:PDP49528.1;Name=PDP49528.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874544.1;locus_tag=CLI77_04955;product=conjugative transposon protein TraJ;protein_id=PDP49528.1;transl_table=11 NSLS01000012.1 Genbank gene 50137 50766 . - . ID=gene-CLI77_04960;Name=CLI77_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04960 NSLS01000012.1 Protein Homology CDS 50137 50766 . - 0 ID=cds-PDP49529.1;Parent=gene-CLI77_04960;Dbxref=NCBI_GP:PDP49529.1;Name=PDP49529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367641.1;locus_tag=CLI77_04960;product=DUF4141 domain-containing protein;protein_id=PDP49529.1;transl_table=11 NSLS01000012.1 Genbank gene 50793 53318 . - . ID=gene-CLI77_04965;Name=CLI77_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04965 NSLS01000012.1 Protein Homology CDS 50793 53318 . - 0 ID=cds-PDP49530.1;Parent=gene-CLI77_04965;Dbxref=NCBI_GP:PDP49530.1;Name=PDP49530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874655.1;locus_tag=CLI77_04965;product=TraG family conjugative transposon ATPase;protein_id=PDP49530.1;transl_table=11 NSLS01000012.1 Genbank gene 53315 53650 . - . ID=gene-CLI77_04970;Name=CLI77_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04970 NSLS01000012.1 Protein Homology CDS 53315 53650 . - 0 ID=cds-PDP49531.1;Parent=gene-CLI77_04970;Dbxref=NCBI_GP:PDP49531.1;Name=PDP49531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816540.1;locus_tag=CLI77_04970;product=DUF4133 domain-containing protein;protein_id=PDP49531.1;transl_table=11 NSLS01000012.1 Genbank gene 53654 53956 . - . ID=gene-CLI77_04975;Name=CLI77_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04975 NSLS01000012.1 Protein Homology CDS 53654 53956 . - 0 ID=cds-PDP49532.1;Parent=gene-CLI77_04975;Dbxref=NCBI_GP:PDP49532.1;Name=PDP49532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585394.1;locus_tag=CLI77_04975;product=DUF4134 domain-containing protein;protein_id=PDP49532.1;transl_table=11 NSLS01000012.1 Genbank gene 54146 54850 . - . ID=gene-CLI77_04980;Name=CLI77_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04980 NSLS01000012.1 Protein Homology CDS 54146 54850 . - 0 ID=cds-PDP49533.1;Parent=gene-CLI77_04980;Dbxref=NCBI_GP:PDP49533.1;Name=PDP49533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816538.1;locus_tag=CLI77_04980;product=hypothetical protein;protein_id=PDP49533.1;transl_table=11 NSLS01000012.1 Genbank gene 54855 55241 . - . ID=gene-CLI77_04985;Name=CLI77_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04985 NSLS01000012.1 Protein Homology CDS 54855 55241 . - 0 ID=cds-PDP49534.1;Parent=gene-CLI77_04985;Dbxref=NCBI_GP:PDP49534.1;Name=PDP49534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816537.1;locus_tag=CLI77_04985;product=DUF3408 domain-containing protein;protein_id=PDP49534.1;transl_table=11 NSLS01000012.1 Genbank gene 55228 56037 . - . ID=gene-CLI77_04990;Name=CLI77_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04990 NSLS01000012.1 Protein Homology CDS 55228 56037 . - 0 ID=cds-PDP49535.1;Parent=gene-CLI77_04990;Dbxref=NCBI_GP:PDP49535.1;Name=PDP49535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585391.1;locus_tag=CLI77_04990;product=ParA family protein;protein_id=PDP49535.1;transl_table=11 NSLS01000012.1 Genbank gene 56392 56640 . + . ID=gene-CLI77_04995;Name=CLI77_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04995 NSLS01000012.1 Protein Homology CDS 56392 56640 . + 0 ID=cds-PDP49536.1;Parent=gene-CLI77_04995;Dbxref=NCBI_GP:PDP49536.1;Name=PDP49536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816535.1;locus_tag=CLI77_04995;product=hypothetical protein;protein_id=PDP49536.1;transl_table=11 NSLS01000012.1 Genbank gene 56668 57069 . + . ID=gene-CLI77_05000;Name=CLI77_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05000 NSLS01000012.1 Protein Homology CDS 56668 57069 . + 0 ID=cds-PDP49537.1;Parent=gene-CLI77_05000;Dbxref=NCBI_GP:PDP49537.1;Name=PDP49537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874554.1;locus_tag=CLI77_05000;product=hypothetical protein;protein_id=PDP49537.1;transl_table=11 NSLS01000012.1 Genbank gene 57054 58334 . + . ID=gene-CLI77_05005;Name=CLI77_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05005 NSLS01000012.1 Protein Homology CDS 57054 58334 . + 0 ID=cds-PDP49538.1;Parent=gene-CLI77_05005;Dbxref=NCBI_GP:PDP49538.1;Name=PDP49538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI77_05005;product=relaxase;protein_id=PDP49538.1;transl_table=11 NSLS01000012.1 Genbank gene 58336 60345 . + . ID=gene-CLI77_05010;Name=CLI77_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05010 NSLS01000012.1 Protein Homology CDS 58336 60345 . + 0 ID=cds-PDP49539.1;Parent=gene-CLI77_05010;Dbxref=NCBI_GP:PDP49539.1;Name=PDP49539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874569.1;locus_tag=CLI77_05010;product=conjugal transfer protein TraG;protein_id=PDP49539.1;transl_table=11 ##sequence-region NSLS01000013.1 1 60575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000013.1 Genbank region 1 60575 . + . ID=NSLS01000013.1:1..60575;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000013.1 Genbank gene 45 1130 . + . ID=gene-CLI77_05015;Name=CLI77_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05015 NSLS01000013.1 Protein Homology CDS 45 1130 . + 0 ID=cds-PDP49428.1;Parent=gene-CLI77_05015;Dbxref=NCBI_GP:PDP49428.1;Name=PDP49428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_05015;product=IS5/IS1182 family transposase;protein_id=PDP49428.1;transl_table=11 NSLS01000013.1 Genbank gene 1144 1395 . + . ID=gene-CLI77_05020;Name=CLI77_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05020 NSLS01000013.1 Protein Homology CDS 1144 1395 . + 0 ID=cds-PDP49429.1;Parent=gene-CLI77_05020;Dbxref=NCBI_GP:PDP49429.1;Name=PDP49429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_05020;product=hypothetical protein;protein_id=PDP49429.1;transl_table=11 NSLS01000013.1 Genbank pseudogene 1408 1611 . + . ID=gene-CLI77_05025;Name=CLI77_05025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05025;pseudo=true NSLS01000013.1 Protein Homology CDS 1408 1611 . + 0 ID=cds-CLI77_05025;Parent=gene-CLI77_05025;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI77_05025;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000013.1 Genbank gene 1909 3900 . + . ID=gene-CLI77_05030;Name=CLI77_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05030 NSLS01000013.1 Protein Homology CDS 1909 3900 . + 0 ID=cds-PDP49430.1;Parent=gene-CLI77_05030;Dbxref=NCBI_GP:PDP49430.1;Name=PDP49430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874003.1;locus_tag=CLI77_05030;product=DUF4954 domain-containing protein;protein_id=PDP49430.1;transl_table=11 NSLS01000013.1 Genbank gene 3983 4702 . + . ID=gene-CLI77_05035;Name=CLI77_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05035 NSLS01000013.1 Protein Homology CDS 3983 4702 . + 0 ID=cds-PDP49431.1;Parent=gene-CLI77_05035;Dbxref=NCBI_GP:PDP49431.1;Name=PDP49431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583568.1;locus_tag=CLI77_05035;product=UMP kinase;protein_id=PDP49431.1;transl_table=11 NSLS01000013.1 Genbank gene 4739 5299 . + . ID=gene-CLI77_05040;Name=CLI77_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05040 NSLS01000013.1 Protein Homology CDS 4739 5299 . + 0 ID=cds-PDP49432.1;Parent=gene-CLI77_05040;Dbxref=NCBI_GP:PDP49432.1;Name=PDP49432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583567.1;locus_tag=CLI77_05040;product=ribosome-recycling factor;protein_id=PDP49432.1;transl_table=11 NSLS01000013.1 Genbank gene 5384 6331 . + . ID=gene-CLI77_05045;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CLI77_05045 NSLS01000013.1 Protein Homology CDS 5384 6331 . + 0 ID=cds-PDP49433.1;Parent=gene-CLI77_05045;Dbxref=NCBI_GP:PDP49433.1;Name=PDP49433.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874007.1;locus_tag=CLI77_05045;product=ribosome small subunit-dependent GTPase A;protein_id=PDP49433.1;transl_table=11 NSLS01000013.1 cmsearch riboswitch 6364 6477 . + . ID=id-NSLS01000013.1:6364..6477;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000013.1 Genbank gene 6554 8791 . + . ID=gene-CLI77_05050;Name=CLI77_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05050 NSLS01000013.1 Protein Homology CDS 6554 8791 . + 0 ID=cds-PDP49434.1;Parent=gene-CLI77_05050;Dbxref=NCBI_GP:PDP49434.1;Name=PDP49434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874008.1;locus_tag=CLI77_05050;product=TonB-dependent receptor;protein_id=PDP49434.1;transl_table=11 NSLS01000013.1 Genbank gene 8796 9404 . + . ID=gene-CLI77_05055;Name=CLI77_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05055 NSLS01000013.1 Protein Homology CDS 8796 9404 . + 0 ID=cds-PDP49435.1;Parent=gene-CLI77_05055;Dbxref=NCBI_GP:PDP49435.1;Name=PDP49435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965727.1;locus_tag=CLI77_05055;product=transporter;protein_id=PDP49435.1;transl_table=11 NSLS01000013.1 Genbank gene 9401 10078 . + . ID=gene-CLI77_05060;Name=CLI77_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05060 NSLS01000013.1 Protein Homology CDS 9401 10078 . + 0 ID=cds-PDP49436.1;Parent=gene-CLI77_05060;Dbxref=NCBI_GP:PDP49436.1;Name=PDP49436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583563.1;locus_tag=CLI77_05060;product=thiamine diphosphokinase;protein_id=PDP49436.1;transl_table=11 NSLS01000013.1 Genbank gene 10207 11496 . - . ID=gene-CLI77_05065;Name=CLI77_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05065 NSLS01000013.1 Protein Homology CDS 10207 11496 . - 0 ID=cds-PDP49437.1;Parent=gene-CLI77_05065;Dbxref=NCBI_GP:PDP49437.1;Name=PDP49437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815220.1;locus_tag=CLI77_05065;product=methionine adenosyltransferase;protein_id=PDP49437.1;transl_table=11 NSLS01000013.1 Genbank gene 11919 12620 . - . ID=gene-CLI77_05070;Name=CLI77_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05070 NSLS01000013.1 Protein Homology CDS 11919 12620 . - 0 ID=cds-PDP49438.1;Parent=gene-CLI77_05070;Dbxref=NCBI_GP:PDP49438.1;Name=PDP49438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873997.1;locus_tag=CLI77_05070;product=hypothetical protein;protein_id=PDP49438.1;transl_table=11 NSLS01000013.1 Genbank gene 12741 13220 . - . ID=gene-CLI77_05075;Name=CLI77_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05075 NSLS01000013.1 Protein Homology CDS 12741 13220 . - 0 ID=cds-PDP49439.1;Parent=gene-CLI77_05075;Dbxref=NCBI_GP:PDP49439.1;Name=PDP49439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583560.1;locus_tag=CLI77_05075;product=hypothetical protein;protein_id=PDP49439.1;transl_table=11 NSLS01000013.1 Genbank gene 13316 13858 . - . ID=gene-CLI77_05080;Name=CLI77_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05080 NSLS01000013.1 Protein Homology CDS 13316 13858 . - 0 ID=cds-PDP49477.1;Parent=gene-CLI77_05080;Dbxref=NCBI_GP:PDP49477.1;Name=PDP49477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966129.1;locus_tag=CLI77_05080;product=hypothetical protein;protein_id=PDP49477.1;transl_table=11 NSLS01000013.1 Genbank gene 13915 14358 . - . ID=gene-CLI77_05085;Name=CLI77_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05085 NSLS01000013.1 Protein Homology CDS 13915 14358 . - 0 ID=cds-PDP49478.1;Parent=gene-CLI77_05085;Dbxref=NCBI_GP:PDP49478.1;Name=PDP49478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873991.1;locus_tag=CLI77_05085;product=hypothetical protein;protein_id=PDP49478.1;transl_table=11 NSLS01000013.1 Genbank gene 14612 15091 . - . ID=gene-CLI77_05090;Name=CLI77_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05090 NSLS01000013.1 Protein Homology CDS 14612 15091 . - 0 ID=cds-PDP49440.1;Parent=gene-CLI77_05090;Dbxref=NCBI_GP:PDP49440.1;Name=PDP49440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815208.1;locus_tag=CLI77_05090;product=hypothetical protein;protein_id=PDP49440.1;transl_table=11 NSLS01000013.1 Genbank gene 15096 16460 . - . ID=gene-CLI77_05095;Name=CLI77_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05095 NSLS01000013.1 Protein Homology CDS 15096 16460 . - 0 ID=cds-PDP49441.1;Parent=gene-CLI77_05095;Dbxref=NCBI_GP:PDP49441.1;Name=PDP49441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458559.1;locus_tag=CLI77_05095;product=hypothetical protein;protein_id=PDP49441.1;transl_table=11 NSLS01000013.1 Genbank pseudogene 16564 17338 . - . ID=gene-CLI77_05100;Name=CLI77_05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05100;pseudo=true NSLS01000013.1 Protein Homology CDS 16564 17338 . - 0 ID=cds-CLI77_05100;Parent=gene-CLI77_05100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458561.1;locus_tag=CLI77_05100;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000013.1 Genbank gene 17650 17841 . - . ID=gene-CLI77_05105;Name=CLI77_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05105 NSLS01000013.1 GeneMarkS+ CDS 17650 17841 . - 0 ID=cds-PDP49442.1;Parent=gene-CLI77_05105;Dbxref=NCBI_GP:PDP49442.1;Name=PDP49442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05105;product=hypothetical protein;protein_id=PDP49442.1;transl_table=11 NSLS01000013.1 Genbank gene 17891 18469 . - . ID=gene-CLI77_05110;Name=CLI77_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05110 NSLS01000013.1 GeneMarkS+ CDS 17891 18469 . - 0 ID=cds-PDP49443.1;Parent=gene-CLI77_05110;Dbxref=NCBI_GP:PDP49443.1;Name=PDP49443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05110;product=hypothetical protein;protein_id=PDP49443.1;transl_table=11 NSLS01000013.1 Genbank pseudogene 18486 19040 . - . ID=gene-CLI77_05115;Name=CLI77_05115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05115;pseudo=true NSLS01000013.1 Protein Homology CDS 18486 19040 . - 0 ID=cds-CLI77_05115;Parent=gene-CLI77_05115;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458559.1;locus_tag=CLI77_05115;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NSLS01000013.1 Genbank gene 19256 19477 . - . ID=gene-CLI77_05120;Name=CLI77_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05120 NSLS01000013.1 Protein Homology CDS 19256 19477 . - 0 ID=cds-PDP49444.1;Parent=gene-CLI77_05120;Dbxref=NCBI_GP:PDP49444.1;Name=PDP49444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583553.1;locus_tag=CLI77_05120;product=hypothetical protein;protein_id=PDP49444.1;transl_table=11 NSLS01000013.1 Genbank gene 20079 20741 . - . ID=gene-CLI77_05125;Name=CLI77_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05125 NSLS01000013.1 Protein Homology CDS 20079 20741 . - 0 ID=cds-PDP49445.1;Parent=gene-CLI77_05125;Dbxref=NCBI_GP:PDP49445.1;Name=PDP49445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964733.1;locus_tag=CLI77_05125;product=hypothetical protein;protein_id=PDP49445.1;transl_table=11 NSLS01000013.1 Genbank gene 20882 21496 . - . ID=gene-CLI77_05130;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CLI77_05130 NSLS01000013.1 Protein Homology CDS 20882 21496 . - 0 ID=cds-PDP49446.1;Parent=gene-CLI77_05130;Dbxref=NCBI_GP:PDP49446.1;Name=PDP49446.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815202.1;locus_tag=CLI77_05130;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=PDP49446.1;transl_table=11 NSLS01000013.1 Genbank gene 21493 22527 . - . ID=gene-CLI77_05135;Name=CLI77_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05135 NSLS01000013.1 Protein Homology CDS 21493 22527 . - 0 ID=cds-PDP49447.1;Parent=gene-CLI77_05135;Dbxref=NCBI_GP:PDP49447.1;Name=PDP49447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815201.1;locus_tag=CLI77_05135;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=PDP49447.1;transl_table=11 NSLS01000013.1 Genbank gene 22606 23826 . + . ID=gene-CLI77_05140;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CLI77_05140 NSLS01000013.1 Protein Homology CDS 22606 23826 . + 0 ID=cds-PDP49448.1;Parent=gene-CLI77_05140;Dbxref=NCBI_GP:PDP49448.1;Name=PDP49448.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583549.1;locus_tag=CLI77_05140;product=GTPase HflX;protein_id=PDP49448.1;transl_table=11 NSLS01000013.1 Genbank gene 23989 26076 . + . ID=gene-CLI77_05145;Name=CLI77_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05145 NSLS01000013.1 Protein Homology CDS 23989 26076 . + 0 ID=cds-PDP49449.1;Parent=gene-CLI77_05145;Dbxref=NCBI_GP:PDP49449.1;Name=PDP49449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964737.1;locus_tag=CLI77_05145;product=RNA degradosome polyphosphate kinase;protein_id=PDP49449.1;transl_table=11 NSLS01000013.1 Genbank gene 26080 28188 . + . ID=gene-CLI77_05150;Name=CLI77_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05150 NSLS01000013.1 Protein Homology CDS 26080 28188 . + 0 ID=cds-PDP49479.1;Parent=gene-CLI77_05150;Dbxref=NCBI_GP:PDP49479.1;Name=PDP49479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583547.1;locus_tag=CLI77_05150;product=alpha-L-fucosidase;protein_id=PDP49479.1;transl_table=11 NSLS01000013.1 Genbank gene 28428 29870 . - . ID=gene-CLI77_05155;Name=CLI77_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05155 NSLS01000013.1 Protein Homology CDS 28428 29870 . - 0 ID=cds-PDP49450.1;Parent=gene-CLI77_05155;Dbxref=NCBI_GP:PDP49450.1;Name=PDP49450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583544.1;locus_tag=CLI77_05155;product=hypothetical protein;protein_id=PDP49450.1;transl_table=11 NSLS01000013.1 Genbank gene 29903 30913 . - . ID=gene-CLI77_05160;Name=CLI77_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05160 NSLS01000013.1 Protein Homology CDS 29903 30913 . - 0 ID=cds-PDP49451.1;Parent=gene-CLI77_05160;Dbxref=NCBI_GP:PDP49451.1;Name=PDP49451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874832.1;locus_tag=CLI77_05160;product=glycosyl transferase family 2;protein_id=PDP49451.1;transl_table=11 NSLS01000013.1 Genbank gene 30924 31943 . - . ID=gene-CLI77_05165;Name=CLI77_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05165 NSLS01000013.1 Protein Homology CDS 30924 31943 . - 0 ID=cds-PDP49452.1;Parent=gene-CLI77_05165;Dbxref=NCBI_GP:PDP49452.1;Name=PDP49452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874830.1;locus_tag=CLI77_05165;product=patatin;protein_id=PDP49452.1;transl_table=11 NSLS01000013.1 Genbank gene 31994 33466 . - . ID=gene-CLI77_05170;Name=CLI77_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05170 NSLS01000013.1 Protein Homology CDS 31994 33466 . - 0 ID=cds-PDP49453.1;Parent=gene-CLI77_05170;Dbxref=NCBI_GP:PDP49453.1;Name=PDP49453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009129741.1;locus_tag=CLI77_05170;product=cysteine--tRNA ligase;protein_id=PDP49453.1;transl_table=11 NSLS01000013.1 Genbank gene 33597 34955 . + . ID=gene-CLI77_05175;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CLI77_05175 NSLS01000013.1 Protein Homology CDS 33597 34955 . + 0 ID=cds-PDP49454.1;Parent=gene-CLI77_05175;Dbxref=NCBI_GP:PDP49454.1;Name=PDP49454.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458544.1;locus_tag=CLI77_05175;product=Na+/H+ antiporter NhaA;protein_id=PDP49454.1;transl_table=11 NSLS01000013.1 Genbank gene 34984 35811 . + . ID=gene-CLI77_05180;Name=CLI77_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05180 NSLS01000013.1 Protein Homology CDS 34984 35811 . + 0 ID=cds-PDP49455.1;Parent=gene-CLI77_05180;Dbxref=NCBI_GP:PDP49455.1;Name=PDP49455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458543.1;locus_tag=CLI77_05180;product=glycerol acyltransferase;protein_id=PDP49455.1;transl_table=11 NSLS01000013.1 Genbank gene 35823 36797 . + . ID=gene-CLI77_05185;Name=CLI77_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05185 NSLS01000013.1 Protein Homology CDS 35823 36797 . + 0 ID=cds-PDP49456.1;Parent=gene-CLI77_05185;Dbxref=NCBI_GP:PDP49456.1;Name=PDP49456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583538.1;locus_tag=CLI77_05185;product=GNAT family N-acetyltransferase;protein_id=PDP49456.1;transl_table=11 NSLS01000013.1 Genbank gene 36784 37191 . + . ID=gene-CLI77_05190;Name=CLI77_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05190 NSLS01000013.1 Protein Homology CDS 36784 37191 . + 0 ID=cds-PDP49457.1;Parent=gene-CLI77_05190;Dbxref=NCBI_GP:PDP49457.1;Name=PDP49457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964518.1;locus_tag=CLI77_05190;product=hypothetical protein;protein_id=PDP49457.1;transl_table=11 NSLS01000013.1 Genbank gene 37533 39512 . + . ID=gene-CLI77_05195;Name=CLI77_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05195 NSLS01000013.1 Protein Homology CDS 37533 39512 . + 0 ID=cds-PDP49458.1;Parent=gene-CLI77_05195;Dbxref=NCBI_GP:PDP49458.1;Name=PDP49458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874825.1;locus_tag=CLI77_05195;product=urocanate hydratase;protein_id=PDP49458.1;transl_table=11 NSLS01000013.1 Genbank gene 39911 40576 . + . ID=gene-CLI77_05200;Name=CLI77_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05200 NSLS01000013.1 Protein Homology CDS 39911 40576 . + 0 ID=cds-PDP49459.1;Parent=gene-CLI77_05200;Dbxref=NCBI_GP:PDP49459.1;Name=PDP49459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815189.1;locus_tag=CLI77_05200;product=class I SAM-dependent methyltransferase;protein_id=PDP49459.1;transl_table=11 NSLS01000013.1 Genbank gene 40826 41347 . + . ID=gene-CLI77_05205;Name=CLI77_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05205 NSLS01000013.1 Protein Homology CDS 40826 41347 . + 0 ID=cds-PDP49460.1;Parent=gene-CLI77_05205;Dbxref=NCBI_GP:PDP49460.1;Name=PDP49460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874835.1;locus_tag=CLI77_05205;product=hypothetical protein;protein_id=PDP49460.1;transl_table=11 NSLS01000013.1 Genbank gene 42135 45791 . + . ID=gene-CLI77_05210;Name=CLI77_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05210 NSLS01000013.1 Protein Homology CDS 42135 45791 . + 0 ID=cds-PDP49461.1;Parent=gene-CLI77_05210;Dbxref=NCBI_GP:PDP49461.1;Name=PDP49461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956428.1;locus_tag=CLI77_05210;product=hypothetical protein;protein_id=PDP49461.1;transl_table=11 NSLS01000013.1 Genbank gene 45784 46230 . + . ID=gene-CLI77_05215;Name=CLI77_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05215 NSLS01000013.1 Protein Homology CDS 45784 46230 . + 0 ID=cds-PDP49462.1;Parent=gene-CLI77_05215;Dbxref=NCBI_GP:PDP49462.1;Name=PDP49462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583528.1;locus_tag=CLI77_05215;product=hypothetical protein;protein_id=PDP49462.1;transl_table=11 NSLS01000013.1 Genbank gene 46542 47726 . + . ID=gene-CLI77_05220;Name=CLI77_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05220 NSLS01000013.1 Protein Homology CDS 46542 47726 . + 0 ID=cds-PDP49463.1;Parent=gene-CLI77_05220;Dbxref=NCBI_GP:PDP49463.1;Name=PDP49463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583526.1;locus_tag=CLI77_05220;product=AAA family ATPase;protein_id=PDP49463.1;transl_table=11 NSLS01000013.1 Genbank gene 47680 47988 . - . ID=gene-CLI77_05225;Name=CLI77_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05225 NSLS01000013.1 Protein Homology CDS 47680 47988 . - 0 ID=cds-PDP49464.1;Parent=gene-CLI77_05225;Dbxref=NCBI_GP:PDP49464.1;Name=PDP49464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583525.1;locus_tag=CLI77_05225;product=hypothetical protein;protein_id=PDP49464.1;transl_table=11 NSLS01000013.1 Genbank pseudogene 47966 49127 . + . ID=gene-CLI77_05230;Name=CLI77_05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05230;pseudo=true NSLS01000013.1 Protein Homology CDS 47966 49127 . + 0 ID=cds-CLI77_05230;Parent=gene-CLI77_05230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964525.1;locus_tag=CLI77_05230;product=glycerate kinase;pseudo=true;transl_table=11 NSLS01000013.1 Genbank gene 49266 49763 . + . ID=gene-CLI77_05235;Name=CLI77_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05235 NSLS01000013.1 Protein Homology CDS 49266 49763 . + 0 ID=cds-PDP49465.1;Parent=gene-CLI77_05235;Dbxref=NCBI_GP:PDP49465.1;Name=PDP49465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583523.1;locus_tag=CLI77_05235;product=flavodoxin;protein_id=PDP49465.1;transl_table=11 NSLS01000013.1 Genbank gene 49928 50281 . + . ID=gene-CLI77_05240;Name=CLI77_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05240 NSLS01000013.1 Protein Homology CDS 49928 50281 . + 0 ID=cds-PDP49466.1;Parent=gene-CLI77_05240;Dbxref=NCBI_GP:PDP49466.1;Name=PDP49466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964527.1;locus_tag=CLI77_05240;product=DUF2023 domain-containing protein;protein_id=PDP49466.1;transl_table=11 NSLS01000013.1 Genbank gene 50362 50817 . + . ID=gene-CLI77_05245;Name=CLI77_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05245 NSLS01000013.1 Protein Homology CDS 50362 50817 . + 0 ID=cds-PDP49467.1;Parent=gene-CLI77_05245;Dbxref=NCBI_GP:PDP49467.1;Name=PDP49467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956425.1;locus_tag=CLI77_05245;product=CMP deaminase;protein_id=PDP49467.1;transl_table=11 NSLS01000013.1 Genbank gene 50825 52459 . + . ID=gene-CLI77_05250;Name=CLI77_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05250 NSLS01000013.1 Protein Homology CDS 50825 52459 . + 0 ID=cds-PDP49468.1;Parent=gene-CLI77_05250;Dbxref=NCBI_GP:PDP49468.1;Name=PDP49468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815183.1;locus_tag=CLI77_05250;product=peptidase S41;protein_id=PDP49468.1;transl_table=11 NSLS01000013.1 Genbank gene 52419 52976 . + . ID=gene-CLI77_05255;Name=CLI77_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05255 NSLS01000013.1 Protein Homology CDS 52419 52976 . + 0 ID=cds-PDP49469.1;Parent=gene-CLI77_05255;Dbxref=NCBI_GP:PDP49469.1;Name=PDP49469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815182.1;locus_tag=CLI77_05255;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=PDP49469.1;transl_table=11 NSLS01000013.1 Genbank gene 53182 54315 . + . ID=gene-CLI77_05260;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CLI77_05260 NSLS01000013.1 Protein Homology CDS 53182 54315 . + 0 ID=cds-PDP49470.1;Parent=gene-CLI77_05260;Dbxref=NCBI_GP:PDP49470.1;Name=PDP49470.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874340.1;locus_tag=CLI77_05260;product=DNA polymerase III subunit beta;protein_id=PDP49470.1;transl_table=11 NSLS01000013.1 Genbank gene 54328 55107 . + . ID=gene-CLI77_05265;Name=CLI77_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05265 NSLS01000013.1 Protein Homology CDS 54328 55107 . + 0 ID=cds-PDP49471.1;Parent=gene-CLI77_05265;Dbxref=NCBI_GP:PDP49471.1;Name=PDP49471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583517.1;locus_tag=CLI77_05265;product=3'-5' exonuclease;protein_id=PDP49471.1;transl_table=11 NSLS01000013.1 Genbank gene 55133 56347 . + . ID=gene-CLI77_05270;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CLI77_05270 NSLS01000013.1 Protein Homology CDS 55133 56347 . + 0 ID=cds-PDP49472.1;Parent=gene-CLI77_05270;Dbxref=NCBI_GP:PDP49472.1;Name=PDP49472.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583516.1;locus_tag=CLI77_05270;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=PDP49472.1;transl_table=11 NSLS01000013.1 Genbank gene 56344 57252 . + . ID=gene-CLI77_05275;Name=CLI77_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05275 NSLS01000013.1 Protein Homology CDS 56344 57252 . + 0 ID=cds-PDP49473.1;Parent=gene-CLI77_05275;Dbxref=NCBI_GP:PDP49473.1;Name=PDP49473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583515.1;locus_tag=CLI77_05275;product=DUF4835 domain-containing protein;protein_id=PDP49473.1;transl_table=11 NSLS01000013.1 Genbank gene 57267 58922 . + . ID=gene-CLI77_05280;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CLI77_05280 NSLS01000013.1 Protein Homology CDS 57267 58922 . + 0 ID=cds-PDP49474.1;Parent=gene-CLI77_05280;Dbxref=NCBI_GP:PDP49474.1;Name=PDP49474.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964535.1;locus_tag=CLI77_05280;product=DNA repair protein RecN;protein_id=PDP49474.1;transl_table=11 NSLS01000013.1 Genbank gene 58919 59668 . + . ID=gene-CLI77_05285;Name=CLI77_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05285 NSLS01000013.1 Protein Homology CDS 58919 59668 . + 0 ID=cds-PDP49475.1;Parent=gene-CLI77_05285;Dbxref=NCBI_GP:PDP49475.1;Name=PDP49475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815176.1;locus_tag=CLI77_05285;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=PDP49475.1;transl_table=11 NSLS01000013.1 Genbank gene 59694 60074 . + . ID=gene-CLI77_05290;Name=CLI77_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05290 NSLS01000013.1 Protein Homology CDS 59694 60074 . + 0 ID=cds-PDP49476.1;Parent=gene-CLI77_05290;Dbxref=NCBI_GP:PDP49476.1;Name=PDP49476.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149461.1;locus_tag=CLI77_05290;product=RidA family protein;protein_id=PDP49476.1;transl_table=11 ##sequence-region NSLS01000014.1 1 59779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000014.1 Genbank region 1 59779 . + . ID=NSLS01000014.1:1..59779;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000014.1 Genbank gene 317 1726 . + . ID=gene-CLI77_05295;Name=CLI77_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05295 NSLS01000014.1 Protein Homology CDS 317 1726 . + 0 ID=cds-PDP49363.1;Parent=gene-CLI77_05295;Dbxref=NCBI_GP:PDP49363.1;Name=PDP49363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874649.1;locus_tag=CLI77_05295;product=hypothetical protein;protein_id=PDP49363.1;transl_table=11 NSLS01000014.1 Genbank gene 1815 3908 . + . ID=gene-CLI77_05300;Name=CLI77_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05300 NSLS01000014.1 Protein Homology CDS 1815 3908 . + 0 ID=cds-PDP49364.1;Parent=gene-CLI77_05300;Dbxref=NCBI_GP:PDP49364.1;Name=PDP49364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816520.1;locus_tag=CLI77_05300;product=type IA DNA topoisomerase;protein_id=PDP49364.1;transl_table=11 NSLS01000014.1 Genbank gene 3914 11101 . + . ID=gene-CLI77_05305;Name=CLI77_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05305 NSLS01000014.1 Protein Homology CDS 3914 11101 . + 0 ID=cds-PDP49365.1;Parent=gene-CLI77_05305;Dbxref=NCBI_GP:PDP49365.1;Name=PDP49365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585379.1;locus_tag=CLI77_05305;product=helicase;protein_id=PDP49365.1;transl_table=11 NSLS01000014.1 Genbank gene 11478 12182 . - . ID=gene-CLI77_05310;Name=CLI77_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05310 NSLS01000014.1 GeneMarkS+ CDS 11478 12182 . - 0 ID=cds-PDP49366.1;Parent=gene-CLI77_05310;Dbxref=NCBI_GP:PDP49366.1;Name=PDP49366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05310;product=TetR/AcrR family transcriptional regulator;protein_id=PDP49366.1;transl_table=11 NSLS01000014.1 Genbank gene 12193 13422 . - . ID=gene-CLI77_05315;Name=CLI77_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05315 NSLS01000014.1 Protein Homology CDS 12193 13422 . - 0 ID=cds-PDP49367.1;Parent=gene-CLI77_05315;Dbxref=NCBI_GP:PDP49367.1;Name=PDP49367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00155.19;locus_tag=CLI77_05315;product=aminotransferase;protein_id=PDP49367.1;transl_table=11 NSLS01000014.1 Genbank gene 13715 16144 . + . ID=gene-CLI77_05320;Name=CLI77_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05320 NSLS01000014.1 Protein Homology CDS 13715 16144 . + 0 ID=cds-PDP49368.1;Parent=gene-CLI77_05320;Dbxref=NCBI_GP:PDP49368.1;Name=PDP49368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874555.1;locus_tag=CLI77_05320;product=hypothetical protein;protein_id=PDP49368.1;transl_table=11 NSLS01000014.1 Genbank gene 16155 16682 . + . ID=gene-CLI77_05325;Name=CLI77_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05325 NSLS01000014.1 Protein Homology CDS 16155 16682 . + 0 ID=cds-PDP49369.1;Parent=gene-CLI77_05325;Dbxref=NCBI_GP:PDP49369.1;Name=PDP49369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815659.1;locus_tag=CLI77_05325;product=hypothetical protein;protein_id=PDP49369.1;transl_table=11 NSLS01000014.1 Genbank gene 16767 17435 . + . ID=gene-CLI77_05330;Name=CLI77_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05330 NSLS01000014.1 Protein Homology CDS 16767 17435 . + 0 ID=cds-PDP49370.1;Parent=gene-CLI77_05330;Dbxref=NCBI_GP:PDP49370.1;Name=PDP49370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874667.1;locus_tag=CLI77_05330;product=HAD family hydrolase;protein_id=PDP49370.1;transl_table=11 NSLS01000014.1 Genbank gene 17455 18468 . - . ID=gene-CLI77_05335;Name=CLI77_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05335 NSLS01000014.1 Protein Homology CDS 17455 18468 . - 0 ID=cds-PDP49371.1;Parent=gene-CLI77_05335;Dbxref=NCBI_GP:PDP49371.1;Name=PDP49371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359201.1;locus_tag=CLI77_05335;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=PDP49371.1;transl_table=11 NSLS01000014.1 Genbank gene 18462 19073 . - . ID=gene-CLI77_05340;Name=CLI77_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05340 NSLS01000014.1 Protein Homology CDS 18462 19073 . - 0 ID=cds-PDP49413.1;Parent=gene-CLI77_05340;Dbxref=NCBI_GP:PDP49413.1;Name=PDP49413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004357820.1;locus_tag=CLI77_05340;product=hypothetical protein;protein_id=PDP49413.1;transl_table=11 NSLS01000014.1 Genbank gene 19139 19333 . - . ID=gene-CLI77_05345;Name=CLI77_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05345 NSLS01000014.1 Protein Homology CDS 19139 19333 . - 0 ID=cds-PDP49372.1;Parent=gene-CLI77_05345;Dbxref=NCBI_GP:PDP49372.1;Name=PDP49372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956331.1;locus_tag=CLI77_05345;product=DNA-binding protein;protein_id=PDP49372.1;transl_table=11 NSLS01000014.1 Genbank gene 19330 21378 . - . ID=gene-CLI77_05350;Name=CLI77_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05350 NSLS01000014.1 Protein Homology CDS 19330 21378 . - 0 ID=cds-PDP49373.1;Parent=gene-CLI77_05350;Dbxref=NCBI_GP:PDP49373.1;Name=PDP49373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815644.1;locus_tag=CLI77_05350;product=topoisomerase;protein_id=PDP49373.1;transl_table=11 NSLS01000014.1 Genbank gene 21375 21764 . - . ID=gene-CLI77_05355;Name=CLI77_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05355 NSLS01000014.1 Protein Homology CDS 21375 21764 . - 0 ID=cds-PDP49374.1;Parent=gene-CLI77_05355;Dbxref=NCBI_GP:PDP49374.1;Name=PDP49374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585374.1;locus_tag=CLI77_05355;product=DNA-binding protein;protein_id=PDP49374.1;transl_table=11 NSLS01000014.1 Genbank gene 21767 22108 . - . ID=gene-CLI77_05360;Name=CLI77_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05360 NSLS01000014.1 Protein Homology CDS 21767 22108 . - 0 ID=cds-PDP49375.1;Parent=gene-CLI77_05360;Dbxref=NCBI_GP:PDP49375.1;Name=PDP49375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457610.1;locus_tag=CLI77_05360;product=transcriptional regulator;protein_id=PDP49375.1;transl_table=11 NSLS01000014.1 Genbank gene 22499 23656 . - . ID=gene-CLI77_05365;Name=CLI77_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05365 NSLS01000014.1 Protein Homology CDS 22499 23656 . - 0 ID=cds-PDP49376.1;Parent=gene-CLI77_05365;Dbxref=NCBI_GP:PDP49376.1;Name=PDP49376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955941.1;locus_tag=CLI77_05365;product=IS4 family transposase;protein_id=PDP49376.1;transl_table=11 NSLS01000014.1 Genbank pseudogene 24474 25044 . + . ID=gene-CLI77_05370;Name=CLI77_05370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05370;pseudo=true NSLS01000014.1 Protein Homology CDS 24474 25044 . + 0 ID=cds-CLI77_05370;Parent=gene-CLI77_05370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1;locus_tag=CLI77_05370;product=tyrosine recombinase;pseudo=true;transl_table=11 NSLS01000014.1 Genbank pseudogene 25045 25144 . - . ID=gene-CLI77_05375;Name=CLI77_05375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05375;pseudo=true NSLS01000014.1 Protein Homology CDS 25045 25144 . - 0 ID=cds-CLI77_05375;Parent=gene-CLI77_05375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816080.1;locus_tag=CLI77_05375;product=DNA methylase;pseudo=true;transl_table=11 NSLS01000014.1 Genbank gene 25194 26279 . - . ID=gene-CLI77_05380;Name=CLI77_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05380 NSLS01000014.1 Protein Homology CDS 25194 26279 . - 0 ID=cds-PDP49377.1;Parent=gene-CLI77_05380;Dbxref=NCBI_GP:PDP49377.1;Name=PDP49377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_05380;product=IS5/IS1182 family transposase;protein_id=PDP49377.1;transl_table=11 NSLS01000014.1 Genbank gene 26500 26584 . + . ID=gene-CLI77_05385;Name=CLI77_05385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_05385 NSLS01000014.1 tRNAscan-SE tRNA 26500 26584 . + . ID=rna-CLI77_05385;Parent=gene-CLI77_05385;anticodon=(pos:26534..26536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_05385;product=tRNA-Ser NSLS01000014.1 tRNAscan-SE exon 26500 26584 . + . ID=exon-CLI77_05385-1;Parent=rna-CLI77_05385;anticodon=(pos:26534..26536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_05385;product=tRNA-Ser NSLS01000014.1 Genbank gene 26896 28119 . + . ID=gene-CLI77_05390;Name=CLI77_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05390 NSLS01000014.1 Protein Homology CDS 26896 28119 . + 0 ID=cds-PDP49378.1;Parent=gene-CLI77_05390;Dbxref=NCBI_GP:PDP49378.1;Name=PDP49378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1;locus_tag=CLI77_05390;product=integrase;protein_id=PDP49378.1;transl_table=11 NSLS01000014.1 Genbank gene 28153 28626 . + . ID=gene-CLI77_05395;Name=CLI77_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05395 NSLS01000014.1 Protein Homology CDS 28153 28626 . + 0 ID=cds-PDP49379.1;Parent=gene-CLI77_05395;Dbxref=NCBI_GP:PDP49379.1;Name=PDP49379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006255425.1;locus_tag=CLI77_05395;product=hypothetical protein;protein_id=PDP49379.1;transl_table=11 NSLS01000014.1 Genbank gene 28761 29108 . + . ID=gene-CLI77_05400;Name=CLI77_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05400 NSLS01000014.1 Protein Homology CDS 28761 29108 . + 0 ID=cds-PDP49380.1;Parent=gene-CLI77_05400;Dbxref=NCBI_GP:PDP49380.1;Name=PDP49380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006255427.1;locus_tag=CLI77_05400;product=hypothetical protein;protein_id=PDP49380.1;transl_table=11 NSLS01000014.1 Genbank gene 29457 29888 . + . ID=gene-CLI77_05405;Name=CLI77_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05405 NSLS01000014.1 Protein Homology CDS 29457 29888 . + 0 ID=cds-PDP49381.1;Parent=gene-CLI77_05405;Dbxref=NCBI_GP:PDP49381.1;Name=PDP49381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006255428.1;locus_tag=CLI77_05405;product=hypothetical protein;protein_id=PDP49381.1;transl_table=11 NSLS01000014.1 Genbank gene 29895 30314 . + . ID=gene-CLI77_05410;Name=CLI77_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05410 NSLS01000014.1 Protein Homology CDS 29895 30314 . + 0 ID=cds-PDP49382.1;Parent=gene-CLI77_05410;Dbxref=NCBI_GP:PDP49382.1;Name=PDP49382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584841.1;locus_tag=CLI77_05410;product=PcfK-like protein;protein_id=PDP49382.1;transl_table=11 NSLS01000014.1 Genbank gene 30318 31592 . + . ID=gene-CLI77_05415;Name=CLI77_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05415 NSLS01000014.1 Protein Homology CDS 30318 31592 . + 0 ID=cds-PDP49383.1;Parent=gene-CLI77_05415;Dbxref=NCBI_GP:PDP49383.1;Name=PDP49383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564054.1;locus_tag=CLI77_05415;product=PcfJ-like protein;protein_id=PDP49383.1;transl_table=11 NSLS01000014.1 Genbank gene 31620 31874 . + . ID=gene-CLI77_05420;Name=CLI77_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05420 NSLS01000014.1 Protein Homology CDS 31620 31874 . + 0 ID=cds-PDP49384.1;Parent=gene-CLI77_05420;Dbxref=NCBI_GP:PDP49384.1;Name=PDP49384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1;locus_tag=CLI77_05420;product=hypothetical protein;protein_id=PDP49384.1;transl_table=11 NSLS01000014.1 Genbank gene 32043 32549 . - . ID=gene-CLI77_05425;Name=CLI77_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05425 NSLS01000014.1 Protein Homology CDS 32043 32549 . - 0 ID=cds-PDP49385.1;Parent=gene-CLI77_05425;Dbxref=NCBI_GP:PDP49385.1;Name=PDP49385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348175.1;locus_tag=CLI77_05425;product=lysozyme;protein_id=PDP49385.1;transl_table=11 NSLS01000014.1 Genbank gene 32536 33012 . - . ID=gene-CLI77_05430;Name=CLI77_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05430 NSLS01000014.1 Protein Homology CDS 32536 33012 . - 0 ID=cds-PDP49386.1;Parent=gene-CLI77_05430;Dbxref=NCBI_GP:PDP49386.1;Name=PDP49386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584845.1;locus_tag=CLI77_05430;product=DUF3872 domain-containing protein;protein_id=PDP49386.1;transl_table=11 NSLS01000014.1 Genbank gene 33025 33606 . - . ID=gene-CLI77_05435;Name=CLI77_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05435 NSLS01000014.1 Protein Homology CDS 33025 33606 . - 0 ID=cds-PDP49387.1;Parent=gene-CLI77_05435;Dbxref=NCBI_GP:PDP49387.1;Name=PDP49387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009229086.1;locus_tag=CLI77_05435;product=conjugal transfer protein TraO;protein_id=PDP49387.1;transl_table=11 NSLS01000014.1 Genbank gene 33606 34562 . - . ID=gene-CLI77_05440;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI77_05440 NSLS01000014.1 Protein Homology CDS 33606 34562 . - 0 ID=cds-PDP49388.1;Parent=gene-CLI77_05440;Dbxref=NCBI_GP:PDP49388.1;Name=PDP49388.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1;locus_tag=CLI77_05440;product=conjugative transposon protein TraN;protein_id=PDP49388.1;transl_table=11 NSLS01000014.1 Genbank gene 34592 35848 . - . ID=gene-CLI77_05445;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI77_05445 NSLS01000014.1 Protein Homology CDS 34592 35848 . - 0 ID=cds-PDP49389.1;Parent=gene-CLI77_05445;Dbxref=NCBI_GP:PDP49389.1;Name=PDP49389.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353754.1;locus_tag=CLI77_05445;product=conjugative transposon protein TraM;protein_id=PDP49389.1;transl_table=11 NSLS01000014.1 Genbank gene 35838 36131 . - . ID=gene-CLI77_05450;Name=CLI77_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05450 NSLS01000014.1 Protein Homology CDS 35838 36131 . - 0 ID=cds-PDP49390.1;Parent=gene-CLI77_05450;Dbxref=NCBI_GP:PDP49390.1;Name=PDP49390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004335136.1;locus_tag=CLI77_05450;product=hypothetical protein;protein_id=PDP49390.1;transl_table=11 NSLS01000014.1 Genbank gene 36136 36759 . - . ID=gene-CLI77_05455;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CLI77_05455 NSLS01000014.1 Protein Homology CDS 36136 36759 . - 0 ID=cds-PDP49391.1;Parent=gene-CLI77_05455;Dbxref=NCBI_GP:PDP49391.1;Name=PDP49391.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1;locus_tag=CLI77_05455;product=conjugative transposon protein TraK;protein_id=PDP49391.1;transl_table=11 NSLS01000014.1 Genbank gene 36779 37816 . - . ID=gene-CLI77_05460;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CLI77_05460 NSLS01000014.1 Protein Homology CDS 36779 37816 . - 0 ID=cds-PDP49392.1;Parent=gene-CLI77_05460;Dbxref=NCBI_GP:PDP49392.1;Name=PDP49392.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434717.1;locus_tag=CLI77_05460;product=conjugative transposon protein TraJ;protein_id=PDP49392.1;transl_table=11 NSLS01000014.1 Genbank gene 37829 38458 . - . ID=gene-CLI77_05465;Name=CLI77_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05465 NSLS01000014.1 Protein Homology CDS 37829 38458 . - 0 ID=cds-PDP49393.1;Parent=gene-CLI77_05465;Dbxref=NCBI_GP:PDP49393.1;Name=PDP49393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008449143.1;locus_tag=CLI77_05465;product=hypothetical protein;protein_id=PDP49393.1;transl_table=11 NSLS01000014.1 Genbank gene 38485 40995 . - . ID=gene-CLI77_05470;Name=CLI77_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05470 NSLS01000014.1 Protein Homology CDS 38485 40995 . - 0 ID=cds-PDP49394.1;Parent=gene-CLI77_05470;Dbxref=NCBI_GP:PDP49394.1;Name=PDP49394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348188.1;locus_tag=CLI77_05470;product=conjugal transfer protein TraG;protein_id=PDP49394.1;transl_table=11 NSLS01000014.1 Genbank gene 40979 41320 . - . ID=gene-CLI77_05475;Name=CLI77_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05475 NSLS01000014.1 Protein Homology CDS 40979 41320 . - 0 ID=cds-PDP49395.1;Parent=gene-CLI77_05475;Dbxref=NCBI_GP:PDP49395.1;Name=PDP49395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584854.1;locus_tag=CLI77_05475;product=conjugal transfer protein TraF;protein_id=PDP49395.1;transl_table=11 NSLS01000014.1 Genbank gene 41323 41625 . - . ID=gene-CLI77_05480;Name=CLI77_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05480 NSLS01000014.1 Protein Homology CDS 41323 41625 . - 0 ID=cds-PDP49396.1;Parent=gene-CLI77_05480;Dbxref=NCBI_GP:PDP49396.1;Name=PDP49396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004378854.1;locus_tag=CLI77_05480;product=DUF4134 domain-containing protein;protein_id=PDP49396.1;transl_table=11 NSLS01000014.1 Genbank gene 41752 42519 . - . ID=gene-CLI77_05485;Name=CLI77_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05485 NSLS01000014.1 Protein Homology CDS 41752 42519 . - 0 ID=cds-PDP49414.1;Parent=gene-CLI77_05485;Dbxref=NCBI_GP:PDP49414.1;Name=PDP49414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004365153.1;locus_tag=CLI77_05485;product=hypothetical protein;protein_id=PDP49414.1;transl_table=11 NSLS01000014.1 Genbank gene 42519 43043 . - . ID=gene-CLI77_05490;Name=CLI77_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05490 NSLS01000014.1 Protein Homology CDS 42519 43043 . - 0 ID=cds-PDP49397.1;Parent=gene-CLI77_05490;Dbxref=NCBI_GP:PDP49397.1;Name=PDP49397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353767.1;locus_tag=CLI77_05490;product=DUF3408 domain-containing protein;protein_id=PDP49397.1;transl_table=11 NSLS01000014.1 Genbank gene 43040 43831 . - . ID=gene-CLI77_05495;Name=CLI77_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05495 NSLS01000014.1 Protein Homology CDS 43040 43831 . - 0 ID=cds-PDP49398.1;Parent=gene-CLI77_05495;Dbxref=NCBI_GP:PDP49398.1;Name=PDP49398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347076.1;locus_tag=CLI77_05495;product=conjugal transfer protein TraA;protein_id=PDP49398.1;transl_table=11 NSLS01000014.1 Genbank gene 44384 44797 . + . ID=gene-CLI77_05500;Name=CLI77_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05500 NSLS01000014.1 Protein Homology CDS 44384 44797 . + 0 ID=cds-PDP49399.1;Parent=gene-CLI77_05500;Dbxref=NCBI_GP:PDP49399.1;Name=PDP49399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008824343.1;locus_tag=CLI77_05500;product=hypothetical protein;protein_id=PDP49399.1;transl_table=11 NSLS01000014.1 Genbank gene 44794 46074 . + . ID=gene-CLI77_05505;Name=CLI77_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05505 NSLS01000014.1 Protein Homology CDS 44794 46074 . + 0 ID=cds-PDP49400.1;Parent=gene-CLI77_05505;Dbxref=NCBI_GP:PDP49400.1;Name=PDP49400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584860.1;locus_tag=CLI77_05505;product=relaxase;protein_id=PDP49400.1;transl_table=11 NSLS01000014.1 Genbank gene 46115 48118 . + . ID=gene-CLI77_05510;Name=CLI77_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05510 NSLS01000014.1 Protein Homology CDS 46115 48118 . + 0 ID=cds-PDP49401.1;Parent=gene-CLI77_05510;Dbxref=NCBI_GP:PDP49401.1;Name=PDP49401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671957.1;locus_tag=CLI77_05510;product=conjugal transfer protein TraG;protein_id=PDP49401.1;transl_table=11 NSLS01000014.1 Genbank gene 48416 48673 . + . ID=gene-CLI77_05515;Name=CLI77_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05515 NSLS01000014.1 GeneMarkS+ CDS 48416 48673 . + 0 ID=cds-PDP49402.1;Parent=gene-CLI77_05515;Dbxref=NCBI_GP:PDP49402.1;Name=PDP49402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05515;product=hypothetical protein;protein_id=PDP49402.1;transl_table=11 NSLS01000014.1 Genbank gene 48776 49105 . - . ID=gene-CLI77_05520;Name=CLI77_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05520 NSLS01000014.1 Protein Homology CDS 48776 49105 . - 0 ID=cds-PDP49403.1;Parent=gene-CLI77_05520;Dbxref=NCBI_GP:PDP49403.1;Name=PDP49403.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03965.14;locus_tag=CLI77_05520;product=hypothetical protein;protein_id=PDP49403.1;transl_table=11 NSLS01000014.1 Genbank gene 49119 49718 . - . ID=gene-CLI77_05525;Name=CLI77_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05525 NSLS01000014.1 GeneMarkS+ CDS 49119 49718 . - 0 ID=cds-PDP49404.1;Parent=gene-CLI77_05525;Dbxref=NCBI_GP:PDP49404.1;Name=PDP49404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05525;product=hypothetical protein;protein_id=PDP49404.1;transl_table=11 NSLS01000014.1 Genbank gene 49756 51972 . - . ID=gene-CLI77_05530;Name=CLI77_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05530 NSLS01000014.1 Protein Homology CDS 49756 51972 . - 0 ID=cds-PDP49405.1;Parent=gene-CLI77_05530;Dbxref=NCBI_GP:PDP49405.1;Name=PDP49405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584864.1;locus_tag=CLI77_05530;product=ABC transporter ATP-binding protein;protein_id=PDP49405.1;transl_table=11 NSLS01000014.1 Genbank gene 51953 54274 . - . ID=gene-CLI77_05535;Name=CLI77_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05535 NSLS01000014.1 Protein Homology CDS 51953 54274 . - 0 ID=cds-PDP49406.1;Parent=gene-CLI77_05535;Dbxref=NCBI_GP:PDP49406.1;Name=PDP49406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584865.1;locus_tag=CLI77_05535;product=hypothetical protein;protein_id=PDP49406.1;transl_table=11 NSLS01000014.1 Genbank gene 54302 54964 . - . ID=gene-CLI77_05540;Name=CLI77_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05540 NSLS01000014.1 GeneMarkS+ CDS 54302 54964 . - 0 ID=cds-PDP49407.1;Parent=gene-CLI77_05540;Dbxref=NCBI_GP:PDP49407.1;Name=PDP49407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05540;product=hypothetical protein;protein_id=PDP49407.1;transl_table=11 NSLS01000014.1 Genbank gene 54972 55964 . - . ID=gene-CLI77_05545;Name=gwsS;gbkey=Gene;gene=gwsS;gene_biotype=protein_coding;locus_tag=CLI77_05545 NSLS01000014.1 Protein Homology CDS 54972 55964 . - 0 ID=cds-PDP49408.1;Parent=gene-CLI77_05545;Dbxref=NCBI_GP:PDP49408.1;Name=PDP49408.1;gbkey=CDS;gene=gwsS;inference=COORDINATES: protein motif:HMM:TIGR04193;locus_tag=CLI77_05545;product=grasp-with-spasm system SPASM domain peptide maturase;protein_id=PDP49408.1;transl_table=11 NSLS01000014.1 Genbank gene 56042 56251 . - . ID=gene-CLI77_05550;Name=CLI77_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05550 NSLS01000014.1 GeneMarkS+ CDS 56042 56251 . - 0 ID=cds-PDP49409.1;Parent=gene-CLI77_05550;Dbxref=NCBI_GP:PDP49409.1;Name=PDP49409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05550;product=hypothetical protein;protein_id=PDP49409.1;transl_table=11 NSLS01000014.1 Genbank gene 56235 57221 . - . ID=gene-CLI77_05555;Name=gwsG;gbkey=Gene;gene=gwsG;gene_biotype=protein_coding;locus_tag=CLI77_05555 NSLS01000014.1 Protein Homology CDS 56235 57221 . - 0 ID=cds-PDP49410.1;Parent=gene-CLI77_05555;Dbxref=NCBI_GP:PDP49410.1;Name=PDP49410.1;gbkey=CDS;gene=gwsG;inference=COORDINATES: protein motif:HMM:TIGR04192;locus_tag=CLI77_05555;product=grasp-with-spasm system ATP-grasp peptide maturase;protein_id=PDP49410.1;transl_table=11 NSLS01000014.1 Genbank gene 57333 57518 . - . ID=gene-CLI77_05560;Name=CLI77_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05560 NSLS01000014.1 GeneMarkS+ CDS 57333 57518 . - 0 ID=cds-PDP49411.1;Parent=gene-CLI77_05560;Dbxref=NCBI_GP:PDP49411.1;Name=PDP49411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05560;product=hypothetical protein;protein_id=PDP49411.1;transl_table=11 NSLS01000014.1 Genbank gene 57878 59266 . + . ID=gene-CLI77_05565;Name=CLI77_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05565 NSLS01000014.1 Protein Homology CDS 57878 59266 . + 0 ID=cds-PDP49412.1;Parent=gene-CLI77_05565;Dbxref=NCBI_GP:PDP49412.1;Name=PDP49412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353640.1;locus_tag=CLI77_05565;product=hypothetical protein;protein_id=PDP49412.1;transl_table=11 NSLS01000014.1 Genbank pseudogene 59288 59650 . + . ID=gene-CLI77_05570;Name=CLI77_05570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05570;pseudo=true NSLS01000014.1 Protein Homology CDS 59288 59650 . + 0 ID=cds-CLI77_05570;Parent=gene-CLI77_05570;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362612.1;locus_tag=CLI77_05570;product=DNA topoisomerase III;pseudo=true;transl_table=11 ##sequence-region NSLS01000015.1 1 55282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000015.1 Genbank region 1 55282 . + . ID=NSLS01000015.1:1..55282;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000015.1 Genbank gene 453 1640 . + . ID=gene-CLI77_05575;Name=CLI77_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05575 NSLS01000015.1 Protein Homology CDS 453 1640 . + 0 ID=cds-PDP49302.1;Parent=gene-CLI77_05575;Dbxref=NCBI_GP:PDP49302.1;Name=PDP49302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873974.1;locus_tag=CLI77_05575;product=ATP-binding protein;protein_id=PDP49302.1;transl_table=11 NSLS01000015.1 Genbank gene 1786 2070 . - . ID=gene-CLI77_05580;Name=CLI77_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05580 NSLS01000015.1 Protein Homology CDS 1786 2070 . - 0 ID=cds-PDP49303.1;Parent=gene-CLI77_05580;Dbxref=NCBI_GP:PDP49303.1;Name=PDP49303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458676.1;locus_tag=CLI77_05580;product=hypothetical protein;protein_id=PDP49303.1;transl_table=11 NSLS01000015.1 Genbank gene 2099 3853 . + . ID=gene-CLI77_05585;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CLI77_05585 NSLS01000015.1 Protein Homology CDS 2099 3853 . + 0 ID=cds-PDP49304.1;Parent=gene-CLI77_05585;Dbxref=NCBI_GP:PDP49304.1;Name=PDP49304.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458677.1;locus_tag=CLI77_05585;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=PDP49304.1;transl_table=11 NSLS01000015.1 Genbank gene 3850 4905 . + . ID=gene-CLI77_05590;Name=CLI77_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05590 NSLS01000015.1 Protein Homology CDS 3850 4905 . + 0 ID=cds-PDP49305.1;Parent=gene-CLI77_05590;Dbxref=NCBI_GP:PDP49305.1;Name=PDP49305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955907.1;locus_tag=CLI77_05590;product=PspC family transcriptional regulator;protein_id=PDP49305.1;transl_table=11 NSLS01000015.1 Genbank gene 5036 6736 . + . ID=gene-CLI77_05595;Name=CLI77_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05595 NSLS01000015.1 Protein Homology CDS 5036 6736 . + 0 ID=cds-PDP49306.1;Parent=gene-CLI77_05595;Dbxref=NCBI_GP:PDP49306.1;Name=PDP49306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873955.1;locus_tag=CLI77_05595;product=hypothetical protein;protein_id=PDP49306.1;transl_table=11 NSLS01000015.1 Genbank gene 6769 7953 . + . ID=gene-CLI77_05600;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CLI77_05600 NSLS01000015.1 Protein Homology CDS 6769 7953 . + 0 ID=cds-PDP49307.1;Parent=gene-CLI77_05600;Dbxref=NCBI_GP:PDP49307.1;Name=PDP49307.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583719.1;locus_tag=CLI77_05600;product=nicotinate phosphoribosyltransferase;protein_id=PDP49307.1;transl_table=11 NSLS01000015.1 Genbank gene 7953 8546 . + . ID=gene-CLI77_05605;Name=CLI77_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05605 NSLS01000015.1 Protein Homology CDS 7953 8546 . + 0 ID=cds-PDP49308.1;Parent=gene-CLI77_05605;Dbxref=NCBI_GP:PDP49308.1;Name=PDP49308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815332.1;locus_tag=CLI77_05605;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=PDP49308.1;transl_table=11 NSLS01000015.1 Genbank gene 8560 8943 . + . ID=gene-CLI77_05610;Name=CLI77_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05610 NSLS01000015.1 Protein Homology CDS 8560 8943 . + 0 ID=cds-PDP49309.1;Parent=gene-CLI77_05610;Dbxref=NCBI_GP:PDP49309.1;Name=PDP49309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583721.1;locus_tag=CLI77_05610;product=DUF2007 domain-containing protein;protein_id=PDP49309.1;transl_table=11 NSLS01000015.1 Genbank gene 8950 9132 . + . ID=gene-CLI77_05615;Name=CLI77_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05615 NSLS01000015.1 Protein Homology CDS 8950 9132 . + 0 ID=cds-PDP49310.1;Parent=gene-CLI77_05615;Dbxref=NCBI_GP:PDP49310.1;Name=PDP49310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964468.1;locus_tag=CLI77_05615;product=hypothetical protein;protein_id=PDP49310.1;transl_table=11 NSLS01000015.1 Genbank gene 9236 10717 . + . ID=gene-CLI77_05620;Name=CLI77_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05620 NSLS01000015.1 Protein Homology CDS 9236 10717 . + 0 ID=cds-PDP49311.1;Parent=gene-CLI77_05620;Dbxref=NCBI_GP:PDP49311.1;Name=PDP49311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583723.1;locus_tag=CLI77_05620;product=hypothetical protein;protein_id=PDP49311.1;transl_table=11 NSLS01000015.1 Genbank gene 10722 12764 . + . ID=gene-CLI77_05625;Name=CLI77_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05625 NSLS01000015.1 Protein Homology CDS 10722 12764 . + 0 ID=cds-PDP49312.1;Parent=gene-CLI77_05625;Dbxref=NCBI_GP:PDP49312.1;Name=PDP49312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815334.1;locus_tag=CLI77_05625;product=helicase;protein_id=PDP49312.1;transl_table=11 NSLS01000015.1 Genbank gene 12862 14040 . - . ID=gene-CLI77_05630;Name=CLI77_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05630 NSLS01000015.1 Protein Homology CDS 12862 14040 . - 0 ID=cds-PDP49313.1;Parent=gene-CLI77_05630;Dbxref=NCBI_GP:PDP49313.1;Name=PDP49313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815335.1;locus_tag=CLI77_05630;product=transporter;protein_id=PDP49313.1;transl_table=11 NSLS01000015.1 Genbank gene 14057 17176 . - . ID=gene-CLI77_05635;Name=CLI77_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05635 NSLS01000015.1 Protein Homology CDS 14057 17176 . - 0 ID=cds-PDP49314.1;Parent=gene-CLI77_05635;Dbxref=NCBI_GP:PDP49314.1;Name=PDP49314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583726.1;locus_tag=CLI77_05635;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=PDP49314.1;transl_table=11 NSLS01000015.1 Genbank gene 17196 18374 . - . ID=gene-CLI77_05640;Name=CLI77_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05640 NSLS01000015.1 Protein Homology CDS 17196 18374 . - 0 ID=cds-PDP49315.1;Parent=gene-CLI77_05640;Dbxref=NCBI_GP:PDP49315.1;Name=PDP49315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458686.1;locus_tag=CLI77_05640;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP49315.1;transl_table=11 NSLS01000015.1 Genbank gene 18909 19328 . - . ID=gene-CLI77_05645;Name=CLI77_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05645 NSLS01000015.1 Protein Homology CDS 18909 19328 . - 0 ID=cds-PDP49316.1;Parent=gene-CLI77_05645;Dbxref=NCBI_GP:PDP49316.1;Name=PDP49316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583728.1;locus_tag=CLI77_05645;product=hypothetical protein;protein_id=PDP49316.1;transl_table=11 NSLS01000015.1 Genbank gene 19400 20914 . - . ID=gene-CLI77_05650;Name=CLI77_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05650 NSLS01000015.1 Protein Homology CDS 19400 20914 . - 0 ID=cds-PDP49317.1;Parent=gene-CLI77_05650;Dbxref=NCBI_GP:PDP49317.1;Name=PDP49317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873960.1;locus_tag=CLI77_05650;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=PDP49317.1;transl_table=11 NSLS01000015.1 Genbank gene 20919 21710 . - . ID=gene-CLI77_05655;Name=CLI77_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05655 NSLS01000015.1 Protein Homology CDS 20919 21710 . - 0 ID=cds-PDP49318.1;Parent=gene-CLI77_05655;Dbxref=NCBI_GP:PDP49318.1;Name=PDP49318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432919.1;locus_tag=CLI77_05655;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=PDP49318.1;transl_table=11 NSLS01000015.1 Genbank gene 21710 23098 . - . ID=gene-CLI77_05660;Name=CLI77_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05660 NSLS01000015.1 Protein Homology CDS 21710 23098 . - 0 ID=cds-PDP49319.1;Parent=gene-CLI77_05660;Dbxref=NCBI_GP:PDP49319.1;Name=PDP49319.1;Note=catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964782.1;locus_tag=CLI77_05660;product=bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase;protein_id=PDP49319.1;transl_table=11 NSLS01000015.1 Genbank gene 23077 24126 . - . ID=gene-CLI77_05665;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CLI77_05665 NSLS01000015.1 Protein Homology CDS 23077 24126 . - 0 ID=cds-PDP49320.1;Parent=gene-CLI77_05665;Dbxref=NCBI_GP:PDP49320.1;Name=PDP49320.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583732.1;locus_tag=CLI77_05665;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=PDP49320.1;transl_table=11 NSLS01000015.1 Genbank gene 24219 25049 . - . ID=gene-CLI77_05670;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CLI77_05670 NSLS01000015.1 Protein Homology CDS 24219 25049 . - 0 ID=cds-PDP49321.1;Parent=gene-CLI77_05670;Dbxref=NCBI_GP:PDP49321.1;Name=PDP49321.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709623.1;locus_tag=CLI77_05670;product=orotidine-5'-phosphate decarboxylase;protein_id=PDP49321.1;transl_table=11 NSLS01000015.1 Genbank gene 25066 26151 . - . ID=gene-CLI77_05675;Name=CLI77_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05675 NSLS01000015.1 Protein Homology CDS 25066 26151 . - 0 ID=cds-PDP49322.1;Parent=gene-CLI77_05675;Dbxref=NCBI_GP:PDP49322.1;Name=PDP49322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844127.1;locus_tag=CLI77_05675;product=peptide chain release factor 1;protein_id=PDP49322.1;transl_table=11 NSLS01000015.1 Genbank gene 26176 27342 . - . ID=gene-CLI77_05680;Name=CLI77_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05680 NSLS01000015.1 Protein Homology CDS 26176 27342 . - 0 ID=cds-PDP49323.1;Parent=gene-CLI77_05680;Dbxref=NCBI_GP:PDP49323.1;Name=PDP49323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098196.1;locus_tag=CLI77_05680;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=PDP49323.1;transl_table=11 NSLS01000015.1 Genbank gene 27371 28312 . - . ID=gene-CLI77_05685;Name=CLI77_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05685 NSLS01000015.1 Protein Homology CDS 27371 28312 . - 0 ID=cds-PDP49324.1;Parent=gene-CLI77_05685;Dbxref=NCBI_GP:PDP49324.1;Name=PDP49324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583736.1;locus_tag=CLI77_05685;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP49324.1;transl_table=11 NSLS01000015.1 Genbank pseudogene 28405 28994 . - . ID=gene-CLI77_05690;Name=CLI77_05690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05690;pseudo=true NSLS01000015.1 Protein Homology CDS 28405 28994 . - 0 ID=cds-CLI77_05690;Parent=gene-CLI77_05690;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458694.1;locus_tag=CLI77_05690;product=RloB-like protein;pseudo=true;transl_table=11 NSLS01000015.1 Genbank gene 28967 30268 . - . ID=gene-CLI77_05695;Name=CLI77_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05695 NSLS01000015.1 Protein Homology CDS 28967 30268 . - 0 ID=cds-PDP49325.1;Parent=gene-CLI77_05695;Dbxref=NCBI_GP:PDP49325.1;Name=PDP49325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955913.1;locus_tag=CLI77_05695;product=abortive infection protein;protein_id=PDP49325.1;transl_table=11 NSLS01000015.1 Genbank gene 30299 30562 . - . ID=gene-CLI77_05700;Name=CLI77_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05700 NSLS01000015.1 Protein Homology CDS 30299 30562 . - 0 ID=cds-PDP49326.1;Parent=gene-CLI77_05700;Dbxref=NCBI_GP:PDP49326.1;Name=PDP49326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583739.1;locus_tag=CLI77_05700;product=DUF1661 domain-containing protein;protein_id=PDP49326.1;transl_table=11 NSLS01000015.1 Genbank gene 30585 32762 . + . ID=gene-CLI77_05705;Name=CLI77_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05705 NSLS01000015.1 Protein Homology CDS 30585 32762 . + 0 ID=cds-PDP49327.1;Parent=gene-CLI77_05705;Dbxref=NCBI_GP:PDP49327.1;Name=PDP49327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873951.1;locus_tag=CLI77_05705;product=Ig-like protein;protein_id=PDP49327.1;transl_table=11 NSLS01000015.1 Genbank gene 32824 33726 . + . ID=gene-CLI77_05710;Name=CLI77_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05710 NSLS01000015.1 Protein Homology CDS 32824 33726 . + 0 ID=cds-PDP49328.1;Parent=gene-CLI77_05710;Dbxref=NCBI_GP:PDP49328.1;Name=PDP49328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458698.1;locus_tag=CLI77_05710;product=glycoside hydrolase xylanase;protein_id=PDP49328.1;transl_table=11 NSLS01000015.1 Genbank gene 33732 34517 . + . ID=gene-CLI77_05715;Name=CLI77_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05715 NSLS01000015.1 Protein Homology CDS 33732 34517 . + 0 ID=cds-PDP49329.1;Parent=gene-CLI77_05715;Dbxref=NCBI_GP:PDP49329.1;Name=PDP49329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458699.1;locus_tag=CLI77_05715;product=hypothetical protein;protein_id=PDP49329.1;transl_table=11 NSLS01000015.1 Genbank gene 34612 35811 . + . ID=gene-CLI77_05720;Name=CLI77_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05720 NSLS01000015.1 Protein Homology CDS 34612 35811 . + 0 ID=cds-PDP49330.1;Parent=gene-CLI77_05720;Dbxref=NCBI_GP:PDP49330.1;Name=PDP49330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583743.1;locus_tag=CLI77_05720;product=L-serine ammonia-lyase;protein_id=PDP49330.1;transl_table=11 NSLS01000015.1 Genbank gene 35811 37256 . + . ID=gene-CLI77_05725;Name=CLI77_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05725 NSLS01000015.1 Protein Homology CDS 35811 37256 . + 0 ID=cds-PDP49331.1;Parent=gene-CLI77_05725;Dbxref=NCBI_GP:PDP49331.1;Name=PDP49331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458701.1;locus_tag=CLI77_05725;product=alpha-galactosidase;protein_id=PDP49331.1;transl_table=11 NSLS01000015.1 Genbank gene 37275 39089 . - . ID=gene-CLI77_05730;Name=CLI77_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05730 NSLS01000015.1 Protein Homology CDS 37275 39089 . - 0 ID=cds-PDP49332.1;Parent=gene-CLI77_05730;Dbxref=NCBI_GP:PDP49332.1;Name=PDP49332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583745.1;locus_tag=CLI77_05730;product=DEAD/DEAH box helicase;protein_id=PDP49332.1;transl_table=11 NSLS01000015.1 Genbank gene 39235 39855 . - . ID=gene-CLI77_05735;Name=CLI77_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05735 NSLS01000015.1 Protein Homology CDS 39235 39855 . - 0 ID=cds-PDP49333.1;Parent=gene-CLI77_05735;Dbxref=NCBI_GP:PDP49333.1;Name=PDP49333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955917.1;locus_tag=CLI77_05735;product=SIS domain-containing protein;protein_id=PDP49333.1;transl_table=11 NSLS01000015.1 Genbank gene 40055 41272 . + . ID=gene-CLI77_05740;Name=CLI77_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05740 NSLS01000015.1 Protein Homology CDS 40055 41272 . + 0 ID=cds-PDP49334.1;Parent=gene-CLI77_05740;Dbxref=NCBI_GP:PDP49334.1;Name=PDP49334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815352.1;locus_tag=CLI77_05740;product=insulinase family protein;protein_id=PDP49334.1;transl_table=11 NSLS01000015.1 Genbank gene 41424 41708 . + . ID=gene-CLI77_05745;Name=CLI77_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05745 NSLS01000015.1 Protein Homology CDS 41424 41708 . + 0 ID=cds-PDP49335.1;Parent=gene-CLI77_05745;Dbxref=NCBI_GP:PDP49335.1;Name=PDP49335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815353.1;locus_tag=CLI77_05745;product=hypothetical protein;protein_id=PDP49335.1;transl_table=11 NSLS01000015.1 Genbank gene 42143 42622 . + . ID=gene-CLI77_05750;Name=CLI77_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05750 NSLS01000015.1 Protein Homology CDS 42143 42622 . + 0 ID=cds-PDP49336.1;Parent=gene-CLI77_05750;Dbxref=NCBI_GP:PDP49336.1;Name=PDP49336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583748.1;locus_tag=CLI77_05750;product=DNA starvation/stationary phase protection protein;protein_id=PDP49336.1;transl_table=11 NSLS01000015.1 Genbank gene 42752 44026 . - . ID=gene-CLI77_05755;Name=CLI77_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05755 NSLS01000015.1 Protein Homology CDS 42752 44026 . - 0 ID=cds-PDP49337.1;Parent=gene-CLI77_05755;Dbxref=NCBI_GP:PDP49337.1;Name=PDP49337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964455.1;locus_tag=CLI77_05755;product=ABC transporter permease;protein_id=PDP49337.1;transl_table=11 NSLS01000015.1 Genbank gene 44028 45209 . - . ID=gene-CLI77_05760;Name=CLI77_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05760 NSLS01000015.1 Protein Homology CDS 44028 45209 . - 0 ID=cds-PDP49338.1;Parent=gene-CLI77_05760;Dbxref=NCBI_GP:PDP49338.1;Name=PDP49338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815357.1;locus_tag=CLI77_05760;product=ABC transporter permease;protein_id=PDP49338.1;transl_table=11 NSLS01000015.1 Genbank gene 45212 46207 . - . ID=gene-CLI77_05765;Name=CLI77_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05765 NSLS01000015.1 Protein Homology CDS 45212 46207 . - 0 ID=cds-PDP49339.1;Parent=gene-CLI77_05765;Dbxref=NCBI_GP:PDP49339.1;Name=PDP49339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873973.1;locus_tag=CLI77_05765;product=hemolysin secretion protein D;protein_id=PDP49339.1;transl_table=11 NSLS01000015.1 Genbank gene 46256 47761 . - . ID=gene-CLI77_05770;Name=CLI77_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05770 NSLS01000015.1 Protein Homology CDS 46256 47761 . - 0 ID=cds-PDP49340.1;Parent=gene-CLI77_05770;Dbxref=NCBI_GP:PDP49340.1;Name=PDP49340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583752.1;locus_tag=CLI77_05770;product=alkaline protease;protein_id=PDP49340.1;transl_table=11 NSLS01000015.1 Genbank gene 48680 51355 . - . ID=gene-CLI77_05775;Name=CLI77_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05775 NSLS01000015.1 Protein Homology CDS 48680 51355 . - 0 ID=cds-PDP49341.1;Parent=gene-CLI77_05775;Dbxref=NCBI_GP:PDP49341.1;Name=PDP49341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873956.1;locus_tag=CLI77_05775;product=DNA mismatch repair protein MutS;protein_id=PDP49341.1;transl_table=11 NSLS01000015.1 Genbank gene 51656 52384 . - . ID=gene-CLI77_05780;Name=CLI77_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05780 NSLS01000015.1 Protein Homology CDS 51656 52384 . - 0 ID=cds-PDP49342.1;Parent=gene-CLI77_05780;Dbxref=NCBI_GP:PDP49342.1;Name=PDP49342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856672.1;locus_tag=CLI77_05780;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=PDP49342.1;transl_table=11 NSLS01000015.1 Genbank gene 52427 54886 . - . ID=gene-CLI77_05785;Name=CLI77_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05785 NSLS01000015.1 Protein Homology CDS 52427 54886 . - 0 ID=cds-PDP49343.1;Parent=gene-CLI77_05785;Dbxref=NCBI_GP:PDP49343.1;Name=PDP49343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873967.1;locus_tag=CLI77_05785;product=phenylalanine--tRNA ligase subunit beta;protein_id=PDP49343.1;transl_table=11 ##sequence-region NSLS01000016.1 1 47200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000016.1 Genbank region 1 47200 . + . ID=NSLS01000016.1:1..47200;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000016.1 Genbank gene 29 133 . + . ID=gene-CLI77_05790;Name=CLI77_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05790 NSLS01000016.1 Protein Homology CDS 29 133 . + 0 ID=cds-PDP49287.1;Parent=gene-CLI77_05790;Dbxref=NCBI_GP:PDP49287.1;Name=PDP49287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874574.1;locus_tag=CLI77_05790;product=DNA methylase;protein_id=PDP49287.1;transl_table=11 NSLS01000016.1 Genbank gene 355 2067 . + . ID=gene-CLI77_05795;Name=CLI77_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05795 NSLS01000016.1 Protein Homology CDS 355 2067 . + 0 ID=cds-PDP49247.1;Parent=gene-CLI77_05795;Dbxref=NCBI_GP:PDP49247.1;Name=PDP49247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816619.1;locus_tag=CLI77_05795;product=site-specific DNA-methyltransferase;protein_id=PDP49247.1;transl_table=11 NSLS01000016.1 Genbank gene 2060 4801 . + . ID=gene-CLI77_05800;Name=CLI77_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05800 NSLS01000016.1 Protein Homology CDS 2060 4801 . + 0 ID=cds-PDP49248.1;Parent=gene-CLI77_05800;Dbxref=NCBI_GP:PDP49248.1;Name=PDP49248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457835.1;locus_tag=CLI77_05800;product=restriction endonuclease subunit R;protein_id=PDP49248.1;transl_table=11 NSLS01000016.1 Genbank gene 4878 5516 . - . ID=gene-CLI77_05805;Name=CLI77_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05805 NSLS01000016.1 Protein Homology CDS 4878 5516 . - 0 ID=cds-PDP49249.1;Parent=gene-CLI77_05805;Dbxref=NCBI_GP:PDP49249.1;Name=PDP49249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956297.1;locus_tag=CLI77_05805;product=threonine transporter RhtB;protein_id=PDP49249.1;transl_table=11 NSLS01000016.1 Genbank gene 5714 6853 . - . ID=gene-CLI77_05810;Name=CLI77_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05810 NSLS01000016.1 Protein Homology CDS 5714 6853 . - 0 ID=cds-PDP49250.1;Parent=gene-CLI77_05810;Dbxref=NCBI_GP:PDP49250.1;Name=PDP49250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816622.1;locus_tag=CLI77_05810;product=porin;protein_id=PDP49250.1;transl_table=11 NSLS01000016.1 Genbank gene 6813 7562 . - . ID=gene-CLI77_05815;Name=CLI77_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05815 NSLS01000016.1 Protein Homology CDS 6813 7562 . - 0 ID=cds-PDP49251.1;Parent=gene-CLI77_05815;Dbxref=NCBI_GP:PDP49251.1;Name=PDP49251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965378.1;locus_tag=CLI77_05815;product=ABC transporter permease;protein_id=PDP49251.1;transl_table=11 NSLS01000016.1 Genbank gene 7559 8257 . - . ID=gene-CLI77_05820;Name=CLI77_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05820 NSLS01000016.1 Protein Homology CDS 7559 8257 . - 0 ID=cds-PDP49252.1;Parent=gene-CLI77_05820;Dbxref=NCBI_GP:PDP49252.1;Name=PDP49252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457832.1;locus_tag=CLI77_05820;product=ABC transporter ATP-binding protein;protein_id=PDP49252.1;transl_table=11 NSLS01000016.1 Genbank gene 8309 9247 . - . ID=gene-CLI77_05825;Name=CLI77_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05825 NSLS01000016.1 Protein Homology CDS 8309 9247 . - 0 ID=cds-PDP49253.1;Parent=gene-CLI77_05825;Dbxref=NCBI_GP:PDP49253.1;Name=PDP49253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585466.1;locus_tag=CLI77_05825;product=ABC transporter substrate-binding protein;protein_id=PDP49253.1;transl_table=11 NSLS01000016.1 Genbank gene 9374 10519 . + . ID=gene-CLI77_05830;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CLI77_05830 NSLS01000016.1 Protein Homology CDS 9374 10519 . + 0 ID=cds-PDP49254.1;Parent=gene-CLI77_05830;Dbxref=NCBI_GP:PDP49254.1;Name=PDP49254.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816624.1;locus_tag=CLI77_05830;product=A/G-specific adenine glycosylase;protein_id=PDP49254.1;transl_table=11 NSLS01000016.1 Genbank gene 10838 11608 . + . ID=gene-CLI77_05835;Name=CLI77_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05835 NSLS01000016.1 GeneMarkS+ CDS 10838 11608 . + 0 ID=cds-PDP49255.1;Parent=gene-CLI77_05835;Dbxref=NCBI_GP:PDP49255.1;Name=PDP49255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_05835;product=hypothetical protein;protein_id=PDP49255.1;transl_table=11 NSLS01000016.1 Genbank gene 12759 14045 . + . ID=gene-CLI77_05840;Name=CLI77_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05840 NSLS01000016.1 Protein Homology CDS 12759 14045 . + 0 ID=cds-PDP49256.1;Parent=gene-CLI77_05840;Dbxref=NCBI_GP:PDP49256.1;Name=PDP49256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816627.1;locus_tag=CLI77_05840;product=hypothetical protein;protein_id=PDP49256.1;transl_table=11 NSLS01000016.1 Genbank gene 14574 15995 . + . ID=gene-CLI77_05845;Name=CLI77_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05845 NSLS01000016.1 Protein Homology CDS 14574 15995 . + 0 ID=cds-PDP49257.1;Parent=gene-CLI77_05845;Dbxref=NCBI_GP:PDP49257.1;Name=PDP49257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816629.1;locus_tag=CLI77_05845;product=anaphase-promoting protein;protein_id=PDP49257.1;transl_table=11 NSLS01000016.1 Genbank gene 16066 16944 . + . ID=gene-CLI77_05850;Name=CLI77_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05850 NSLS01000016.1 Protein Homology CDS 16066 16944 . + 0 ID=cds-PDP49258.1;Parent=gene-CLI77_05850;Dbxref=NCBI_GP:PDP49258.1;Name=PDP49258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467178.1;locus_tag=CLI77_05850;product=phosphorylase;protein_id=PDP49258.1;transl_table=11 NSLS01000016.1 Genbank gene 17067 18803 . + . ID=gene-CLI77_05855;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CLI77_05855 NSLS01000016.1 Protein Homology CDS 17067 18803 . + 0 ID=cds-PDP49259.1;Parent=gene-CLI77_05855;Dbxref=NCBI_GP:PDP49259.1;Name=PDP49259.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458069.1;locus_tag=CLI77_05855;product=lysine--tRNA ligase;protein_id=PDP49259.1;transl_table=11 NSLS01000016.1 Genbank gene 18889 19893 . + . ID=gene-CLI77_05860;Name=CLI77_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05860 NSLS01000016.1 Protein Homology CDS 18889 19893 . + 0 ID=cds-PDP49260.1;Parent=gene-CLI77_05860;Dbxref=NCBI_GP:PDP49260.1;Name=PDP49260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458068.1;locus_tag=CLI77_05860;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=PDP49260.1;transl_table=11 NSLS01000016.1 Genbank gene 19926 21263 . + . ID=gene-CLI77_05865;Name=CLI77_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05865 NSLS01000016.1 Protein Homology CDS 19926 21263 . + 0 ID=cds-PDP49261.1;Parent=gene-CLI77_05865;Dbxref=NCBI_GP:PDP49261.1;Name=PDP49261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874325.1;locus_tag=CLI77_05865;product=glucose-6-phosphate isomerase;protein_id=PDP49261.1;transl_table=11 NSLS01000016.1 Genbank gene 21283 21885 . + . ID=gene-CLI77_05870;Name=CLI77_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05870 NSLS01000016.1 Protein Homology CDS 21283 21885 . + 0 ID=cds-PDP49262.1;Parent=gene-CLI77_05870;Dbxref=NCBI_GP:PDP49262.1;Name=PDP49262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874327.1;locus_tag=CLI77_05870;product=DUF4290 domain-containing protein;protein_id=PDP49262.1;transl_table=11 NSLS01000016.1 Genbank gene 21916 23220 . + . ID=gene-CLI77_05875;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CLI77_05875 NSLS01000016.1 Protein Homology CDS 21916 23220 . + 0 ID=cds-PDP49263.1;Parent=gene-CLI77_05875;Dbxref=NCBI_GP:PDP49263.1;Name=PDP49263.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005469204.1;locus_tag=CLI77_05875;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=PDP49263.1;transl_table=11 NSLS01000016.1 Genbank gene 23227 23754 . + . ID=gene-CLI77_05880;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CLI77_05880 NSLS01000016.1 Protein Homology CDS 23227 23754 . + 0 ID=cds-PDP49264.1;Parent=gene-CLI77_05880;Dbxref=NCBI_GP:PDP49264.1;Name=PDP49264.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874311.1;locus_tag=CLI77_05880;product=16S rRNA processing protein RimM;protein_id=PDP49264.1;transl_table=11 NSLS01000016.1 Genbank gene 23751 24908 . + . ID=gene-CLI77_05885;Name=CLI77_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05885 NSLS01000016.1 Protein Homology CDS 23751 24908 . + 0 ID=cds-PDP49265.1;Parent=gene-CLI77_05885;Dbxref=NCBI_GP:PDP49265.1;Name=PDP49265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874315.1;locus_tag=CLI77_05885;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=PDP49265.1;transl_table=11 NSLS01000016.1 Genbank pseudogene 25166 25442 . - . ID=gene-CLI77_05890;Name=CLI77_05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05890;pseudo=true NSLS01000016.1 Protein Homology CDS 25166 25442 . - 0 ID=cds-CLI77_05890;Parent=gene-CLI77_05890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI77_05890;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000016.1 Genbank gene 25702 27156 . + . ID=gene-CLI77_05895;Name=CLI77_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05895 NSLS01000016.1 Protein Homology CDS 25702 27156 . + 0 ID=cds-PDP49266.1;Parent=gene-CLI77_05895;Dbxref=NCBI_GP:PDP49266.1;Name=PDP49266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816636.1;locus_tag=CLI77_05895;product=RNA methyltransferase;protein_id=PDP49266.1;transl_table=11 NSLS01000016.1 Genbank gene 27188 29386 . + . ID=gene-CLI77_05900;Name=CLI77_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05900 NSLS01000016.1 Protein Homology CDS 27188 29386 . + 0 ID=cds-PDP49267.1;Parent=gene-CLI77_05900;Dbxref=NCBI_GP:PDP49267.1;Name=PDP49267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873421.1;locus_tag=CLI77_05900;product=S9 family peptidase;protein_id=PDP49267.1;transl_table=11 NSLS01000016.1 Genbank gene 29383 30678 . + . ID=gene-CLI77_05905;Name=CLI77_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05905 NSLS01000016.1 Protein Homology CDS 29383 30678 . + 0 ID=cds-PDP49268.1;Parent=gene-CLI77_05905;Dbxref=NCBI_GP:PDP49268.1;Name=PDP49268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458061.1;locus_tag=CLI77_05905;product=phosphoribosylamine--glycine ligase;protein_id=PDP49268.1;transl_table=11 NSLS01000016.1 Genbank gene 30681 31652 . + . ID=gene-CLI77_05910;Name=CLI77_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05910 NSLS01000016.1 Protein Homology CDS 30681 31652 . + 0 ID=cds-PDP49269.1;Parent=gene-CLI77_05910;Dbxref=NCBI_GP:PDP49269.1;Name=PDP49269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458060.1;locus_tag=CLI77_05910;product=hypothetical protein;protein_id=PDP49269.1;transl_table=11 NSLS01000016.1 Genbank gene 31963 32643 . + . ID=gene-CLI77_05915;Name=CLI77_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05915 NSLS01000016.1 Protein Homology CDS 31963 32643 . + 0 ID=cds-PDP49270.1;Parent=gene-CLI77_05915;Dbxref=NCBI_GP:PDP49270.1;Name=PDP49270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873419.1;locus_tag=CLI77_05915;product=RimJ/RimL family protein N-acetyltransferase;protein_id=PDP49270.1;transl_table=11 NSLS01000016.1 Genbank gene 32966 33145 . - . ID=gene-CLI77_05920;Name=CLI77_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05920 NSLS01000016.1 Protein Homology CDS 32966 33145 . - 0 ID=cds-PDP49271.1;Parent=gene-CLI77_05920;Dbxref=NCBI_GP:PDP49271.1;Name=PDP49271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873428.1;locus_tag=CLI77_05920;product=hypothetical protein;protein_id=PDP49271.1;transl_table=11 NSLS01000016.1 Genbank gene 33510 33935 . + . ID=gene-CLI77_05925;Name=CLI77_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05925 NSLS01000016.1 Protein Homology CDS 33510 33935 . + 0 ID=cds-PDP49272.1;Parent=gene-CLI77_05925;Dbxref=NCBI_GP:PDP49272.1;Name=PDP49272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873418.1;locus_tag=CLI77_05925;product=hypothetical protein;protein_id=PDP49272.1;transl_table=11 NSLS01000016.1 Genbank gene 33877 34068 . - . ID=gene-CLI77_05930;Name=CLI77_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05930 NSLS01000016.1 Protein Homology CDS 33877 34068 . - 0 ID=cds-PDP49273.1;Parent=gene-CLI77_05930;Dbxref=NCBI_GP:PDP49273.1;Name=PDP49273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585497.1;locus_tag=CLI77_05930;product=hypothetical protein;protein_id=PDP49273.1;transl_table=11 NSLS01000016.1 Genbank gene 34073 34534 . + . ID=gene-CLI77_05935;Name=CLI77_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05935 NSLS01000016.1 Protein Homology CDS 34073 34534 . + 0 ID=cds-PDP49274.1;Parent=gene-CLI77_05935;Dbxref=NCBI_GP:PDP49274.1;Name=PDP49274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873420.1;locus_tag=CLI77_05935;product=acyltransferase;protein_id=PDP49274.1;transl_table=11 NSLS01000016.1 Genbank gene 34531 35352 . + . ID=gene-CLI77_05940;Name=CLI77_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05940 NSLS01000016.1 Protein Homology CDS 34531 35352 . + 0 ID=cds-PDP49275.1;Parent=gene-CLI77_05940;Dbxref=NCBI_GP:PDP49275.1;Name=PDP49275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816643.1;locus_tag=CLI77_05940;product=nitrilase family protein;protein_id=PDP49275.1;transl_table=11 NSLS01000016.1 Genbank gene 35463 36095 . + . ID=gene-CLI77_05945;Name=CLI77_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05945 NSLS01000016.1 Protein Homology CDS 35463 36095 . + 0 ID=cds-PDP49276.1;Parent=gene-CLI77_05945;Dbxref=NCBI_GP:PDP49276.1;Name=PDP49276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458056.1;locus_tag=CLI77_05945;product=orotate phosphoribosyltransferase;protein_id=PDP49276.1;transl_table=11 NSLS01000016.1 Genbank gene 36148 36561 . + . ID=gene-CLI77_05950;Name=CLI77_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05950 NSLS01000016.1 Protein Homology CDS 36148 36561 . + 0 ID=cds-PDP49277.1;Parent=gene-CLI77_05950;Dbxref=NCBI_GP:PDP49277.1;Name=PDP49277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873427.1;locus_tag=CLI77_05950;product=polyketide cyclase;protein_id=PDP49277.1;transl_table=11 NSLS01000016.1 Genbank gene 36596 37060 . + . ID=gene-CLI77_05955;Name=CLI77_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05955 NSLS01000016.1 Protein Homology CDS 36596 37060 . + 0 ID=cds-PDP49278.1;Parent=gene-CLI77_05955;Dbxref=NCBI_GP:PDP49278.1;Name=PDP49278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585505.1;locus_tag=CLI77_05955;product=hypothetical protein;protein_id=PDP49278.1;transl_table=11 NSLS01000016.1 Genbank gene 37202 38083 . - . ID=gene-CLI77_05960;Name=CLI77_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05960 NSLS01000016.1 Protein Homology CDS 37202 38083 . - 0 ID=cds-PDP49279.1;Parent=gene-CLI77_05960;Dbxref=NCBI_GP:PDP49279.1;Name=PDP49279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874063.1;locus_tag=CLI77_05960;product=lipid kinase;protein_id=PDP49279.1;transl_table=11 NSLS01000016.1 Genbank gene 38111 38575 . - . ID=gene-CLI77_05965;Name=CLI77_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05965 NSLS01000016.1 Protein Homology CDS 38111 38575 . - 0 ID=cds-PDP49280.1;Parent=gene-CLI77_05965;Dbxref=NCBI_GP:PDP49280.1;Name=PDP49280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816646.1;locus_tag=CLI77_05965;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=PDP49280.1;transl_table=11 NSLS01000016.1 Genbank gene 38712 39983 . - . ID=gene-CLI77_05970;Name=CLI77_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05970 NSLS01000016.1 Protein Homology CDS 38712 39983 . - 0 ID=cds-PDP49281.1;Parent=gene-CLI77_05970;Dbxref=NCBI_GP:PDP49281.1;Name=PDP49281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874067.1;locus_tag=CLI77_05970;product=glycosyl transferase;protein_id=PDP49281.1;transl_table=11 NSLS01000016.1 Genbank gene 39980 41101 . - . ID=gene-CLI77_05975;Name=CLI77_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05975 NSLS01000016.1 Protein Homology CDS 39980 41101 . - 0 ID=cds-PDP49282.1;Parent=gene-CLI77_05975;Dbxref=NCBI_GP:PDP49282.1;Name=PDP49282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874068.1;locus_tag=CLI77_05975;product=glycosyl transferase;protein_id=PDP49282.1;transl_table=11 NSLS01000016.1 Genbank pseudogene 41226 41464 . + . ID=gene-CLI77_05980;Name=CLI77_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_05980;pseudo=true NSLS01000016.1 Protein Homology CDS 41226 41464 . + 0 ID=cds-CLI77_05980;Parent=gene-CLI77_05980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815831.1;locus_tag=CLI77_05980;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000016.1 Genbank gene 41585 43063 . - . ID=gene-CLI77_05985;Name=CLI77_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05985 NSLS01000016.1 Protein Homology CDS 41585 43063 . - 0 ID=cds-PDP49283.1;Parent=gene-CLI77_05985;Dbxref=NCBI_GP:PDP49283.1;Name=PDP49283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965395.1;locus_tag=CLI77_05985;product=hydrolase;protein_id=PDP49283.1;transl_table=11 NSLS01000016.1 Genbank gene 43090 44106 . - . ID=gene-CLI77_05990;Name=CLI77_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05990 NSLS01000016.1 Protein Homology CDS 43090 44106 . - 0 ID=cds-PDP49284.1;Parent=gene-CLI77_05990;Dbxref=NCBI_GP:PDP49284.1;Name=PDP49284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874070.1;locus_tag=CLI77_05990;product=UDP-N-acetylmuramate dehydrogenase;protein_id=PDP49284.1;transl_table=11 NSLS01000016.1 Genbank gene 44106 44576 . - . ID=gene-CLI77_05995;Name=CLI77_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_05995 NSLS01000016.1 Protein Homology CDS 44106 44576 . - 0 ID=cds-PDP49285.1;Parent=gene-CLI77_05995;Dbxref=NCBI_GP:PDP49285.1;Name=PDP49285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816653.1;locus_tag=CLI77_05995;product=SPOR domain-containing protein;protein_id=PDP49285.1;transl_table=11 NSLS01000016.1 Genbank gene 44893 46443 . + . ID=gene-CLI77_06000;Name=CLI77_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06000 NSLS01000016.1 Protein Homology CDS 44893 46443 . + 0 ID=cds-PDP49286.1;Parent=gene-CLI77_06000;Dbxref=NCBI_GP:PDP49286.1;Name=PDP49286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816654.1;locus_tag=CLI77_06000;product=lactate permease;protein_id=PDP49286.1;transl_table=11 ##sequence-region NSLS01000017.1 1 46607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000017.1 Genbank region 1 46607 . + . ID=NSLS01000017.1:1..46607;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000017.1 Genbank pseudogene 184 885 . - . ID=gene-CLI77_06005;Name=CLI77_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06005;pseudo=true NSLS01000017.1 Protein Homology CDS 184 885 . - 0 ID=cds-CLI77_06005;Parent=gene-CLI77_06005;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019149555.1;locus_tag=CLI77_06005;product=virulence protein;pseudo=true;transl_table=11 NSLS01000017.1 Genbank gene 954 1310 . - . ID=gene-CLI77_06010;Name=CLI77_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06010 NSLS01000017.1 Protein Homology CDS 954 1310 . - 0 ID=cds-PDP49197.1;Parent=gene-CLI77_06010;Dbxref=NCBI_GP:PDP49197.1;Name=PDP49197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224125.1;locus_tag=CLI77_06010;product=DNA-binding protein;protein_id=PDP49197.1;transl_table=11 NSLS01000017.1 Genbank gene 1633 2283 . + . ID=gene-CLI77_06015;Name=CLI77_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06015 NSLS01000017.1 Protein Homology CDS 1633 2283 . + 0 ID=cds-PDP49231.1;Parent=gene-CLI77_06015;Dbxref=NCBI_GP:PDP49231.1;Name=PDP49231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230746.1;locus_tag=CLI77_06015;product=DUF4263 domain-containing protein;protein_id=PDP49231.1;transl_table=11 NSLS01000017.1 Genbank gene 2437 2670 . - . ID=gene-CLI77_06020;Name=CLI77_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06020 NSLS01000017.1 Protein Homology CDS 2437 2670 . - 0 ID=cds-PDP49232.1;Parent=gene-CLI77_06020;Dbxref=NCBI_GP:PDP49232.1;Name=PDP49232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956247.1;locus_tag=CLI77_06020;product=hypothetical protein;protein_id=PDP49232.1;transl_table=11 NSLS01000017.1 Genbank gene 2847 3143 . - . ID=gene-CLI77_06025;Name=CLI77_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06025 NSLS01000017.1 GeneMarkS+ CDS 2847 3143 . - 0 ID=cds-PDP49198.1;Parent=gene-CLI77_06025;Dbxref=NCBI_GP:PDP49198.1;Name=PDP49198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_06025;product=hypothetical protein;protein_id=PDP49198.1;transl_table=11 NSLS01000017.1 Genbank pseudogene 3164 4426 . - . ID=gene-CLI77_06030;Name=CLI77_06030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06030;pseudo=true NSLS01000017.1 Protein Homology CDS 3164 4426 . - 0 ID=cds-CLI77_06030;Parent=gene-CLI77_06030;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457877.1;locus_tag=CLI77_06030;product=recombinase;pseudo=true;transl_table=11 NSLS01000017.1 Genbank gene 4439 4993 . - . ID=gene-CLI77_06035;Name=CLI77_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06035 NSLS01000017.1 Protein Homology CDS 4439 4993 . - 0 ID=cds-PDP49199.1;Parent=gene-CLI77_06035;Dbxref=NCBI_GP:PDP49199.1;Name=PDP49199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345233.1;locus_tag=CLI77_06035;product=DNA-binding protein;protein_id=PDP49199.1;transl_table=11 NSLS01000017.1 Genbank gene 5204 7126 . - . ID=gene-CLI77_06040;Name=CLI77_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06040 NSLS01000017.1 Protein Homology CDS 5204 7126 . - 0 ID=cds-PDP49200.1;Parent=gene-CLI77_06040;Dbxref=NCBI_GP:PDP49200.1;Name=PDP49200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149022.1;locus_tag=CLI77_06040;product=molecular chaperone DnaK;protein_id=PDP49200.1;transl_table=11 NSLS01000017.1 Genbank pseudogene 7343 7576 . + . ID=gene-CLI77_06045;Name=CLI77_06045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06045;pseudo=true NSLS01000017.1 Protein Homology CDS 7343 7576 . + 0 ID=cds-CLI77_06045;Parent=gene-CLI77_06045;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815494.1;locus_tag=CLI77_06045;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000017.1 Genbank gene 7715 9262 . + . ID=gene-CLI77_06050;Name=CLI77_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06050 NSLS01000017.1 Protein Homology CDS 7715 9262 . + 0 ID=cds-PDP49201.1;Parent=gene-CLI77_06050;Dbxref=NCBI_GP:PDP49201.1;Name=PDP49201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457875.1;locus_tag=CLI77_06050;product=NAD metabolism ATPase/kinase;protein_id=PDP49201.1;transl_table=11 NSLS01000017.1 Genbank gene 9311 11098 . + . ID=gene-CLI77_06055;Name=CLI77_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06055 NSLS01000017.1 Protein Homology CDS 9311 11098 . + 0 ID=cds-PDP49202.1;Parent=gene-CLI77_06055;Dbxref=NCBI_GP:PDP49202.1;Name=PDP49202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584481.1;locus_tag=CLI77_06055;product=peptidase M24;protein_id=PDP49202.1;transl_table=11 NSLS01000017.1 Genbank gene 11107 11646 . + . ID=gene-CLI77_06060;Name=CLI77_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06060 NSLS01000017.1 Protein Homology CDS 11107 11646 . + 0 ID=cds-PDP49203.1;Parent=gene-CLI77_06060;Dbxref=NCBI_GP:PDP49203.1;Name=PDP49203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584482.1;locus_tag=CLI77_06060;product=gamma carbonic anhydrase family protein;protein_id=PDP49203.1;transl_table=11 NSLS01000017.1 Genbank gene 11659 12672 . + . ID=gene-CLI77_06065;Name=CLI77_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06065 NSLS01000017.1 Protein Homology CDS 11659 12672 . + 0 ID=cds-PDP49204.1;Parent=gene-CLI77_06065;Dbxref=NCBI_GP:PDP49204.1;Name=PDP49204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875017.1;locus_tag=CLI77_06065;product=hypothetical protein;protein_id=PDP49204.1;transl_table=11 NSLS01000017.1 Genbank gene 12700 13350 . + . ID=gene-CLI77_06070;Name=CLI77_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06070 NSLS01000017.1 Protein Homology CDS 12700 13350 . + 0 ID=cds-PDP49205.1;Parent=gene-CLI77_06070;Dbxref=NCBI_GP:PDP49205.1;Name=PDP49205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815961.1;locus_tag=CLI77_06070;product=ribonuclease H;protein_id=PDP49205.1;transl_table=11 NSLS01000017.1 Genbank gene 13365 14537 . + . ID=gene-CLI77_06075;Name=CLI77_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06075 NSLS01000017.1 Protein Homology CDS 13365 14537 . + 0 ID=cds-PDP49206.1;Parent=gene-CLI77_06075;Dbxref=NCBI_GP:PDP49206.1;Name=PDP49206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457870.1;locus_tag=CLI77_06075;product=hypothetical protein;protein_id=PDP49206.1;transl_table=11 NSLS01000017.1 Genbank gene 14888 15700 . + . ID=gene-CLI77_06080;Name=CLI77_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06080 NSLS01000017.1 Protein Homology CDS 14888 15700 . + 0 ID=cds-PDP49207.1;Parent=gene-CLI77_06080;Dbxref=NCBI_GP:PDP49207.1;Name=PDP49207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584486.1;locus_tag=CLI77_06080;product=outer membrane protein assembly factor BamD;protein_id=PDP49207.1;transl_table=11 NSLS01000017.1 Genbank gene 15842 16174 . + . ID=gene-CLI77_06085;Name=CLI77_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06085 NSLS01000017.1 Protein Homology CDS 15842 16174 . + 0 ID=cds-PDP49208.1;Parent=gene-CLI77_06085;Dbxref=NCBI_GP:PDP49208.1;Name=PDP49208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584487.1;locus_tag=CLI77_06085;product=RNA polymerase Rpb6;protein_id=PDP49208.1;transl_table=11 NSLS01000017.1 Genbank gene 16204 16662 . + . ID=gene-CLI77_06090;Name=CLI77_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06090 NSLS01000017.1 Protein Homology CDS 16204 16662 . + 0 ID=cds-PDP49209.1;Parent=gene-CLI77_06090;Dbxref=NCBI_GP:PDP49209.1;Name=PDP49209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584488.1;locus_tag=CLI77_06090;product=DUF4293 domain-containing protein;protein_id=PDP49209.1;transl_table=11 NSLS01000017.1 Genbank gene 16938 17249 . + . ID=gene-CLI77_06095;Name=CLI77_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06095 NSLS01000017.1 Protein Homology CDS 16938 17249 . + 0 ID=cds-PDP49210.1;Parent=gene-CLI77_06095;Dbxref=NCBI_GP:PDP49210.1;Name=PDP49210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966099.1;locus_tag=CLI77_06095;product=DUF3467 domain-containing protein;protein_id=PDP49210.1;transl_table=11 NSLS01000017.1 Genbank gene 17253 18386 . + . ID=gene-CLI77_06100;Name=CLI77_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06100 NSLS01000017.1 Protein Homology CDS 17253 18386 . + 0 ID=cds-PDP49211.1;Parent=gene-CLI77_06100;Dbxref=NCBI_GP:PDP49211.1;Name=PDP49211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584491.1;locus_tag=CLI77_06100;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=PDP49211.1;transl_table=11 NSLS01000017.1 Genbank gene 18396 19121 . + . ID=gene-CLI77_06105;Name=CLI77_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06105 NSLS01000017.1 Protein Homology CDS 18396 19121 . + 0 ID=cds-PDP49212.1;Parent=gene-CLI77_06105;Dbxref=NCBI_GP:PDP49212.1;Name=PDP49212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584492.1;locus_tag=CLI77_06105;product=oxidoreductase;protein_id=PDP49212.1;transl_table=11 NSLS01000017.1 Genbank gene 19292 19498 . - . ID=gene-CLI77_06110;Name=CLI77_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06110 NSLS01000017.1 Protein Homology CDS 19292 19498 . - 0 ID=cds-PDP49213.1;Parent=gene-CLI77_06110;Dbxref=NCBI_GP:PDP49213.1;Name=PDP49213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875006.1;locus_tag=CLI77_06110;product=hypothetical protein;protein_id=PDP49213.1;transl_table=11 NSLS01000017.1 Genbank gene 19728 19931 . + . ID=gene-CLI77_06115;Name=CLI77_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06115 NSLS01000017.1 Protein Homology CDS 19728 19931 . + 0 ID=cds-PDP49214.1;Parent=gene-CLI77_06115;Dbxref=NCBI_GP:PDP49214.1;Name=PDP49214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458217.1;locus_tag=CLI77_06115;product=hypothetical protein;protein_id=PDP49214.1;transl_table=11 NSLS01000017.1 Genbank gene 20062 21627 . + . ID=gene-CLI77_06120;Name=CLI77_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06120 NSLS01000017.1 Protein Homology CDS 20062 21627 . + 0 ID=cds-PDP49215.1;Parent=gene-CLI77_06120;Dbxref=NCBI_GP:PDP49215.1;Name=PDP49215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458218.1;locus_tag=CLI77_06120;product=lytic transglycosylase F;protein_id=PDP49215.1;transl_table=11 NSLS01000017.1 Genbank gene 21653 23524 . + . ID=gene-CLI77_06125;Name=CLI77_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06125 NSLS01000017.1 Protein Homology CDS 21653 23524 . + 0 ID=cds-PDP49216.1;Parent=gene-CLI77_06125;Dbxref=NCBI_GP:PDP49216.1;Name=PDP49216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965618.1;locus_tag=CLI77_06125;product=ABC transporter;protein_id=PDP49216.1;transl_table=11 NSLS01000017.1 Genbank gene 23532 24236 . + . ID=gene-CLI77_06130;Name=CLI77_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06130 NSLS01000017.1 Protein Homology CDS 23532 24236 . + 0 ID=cds-PDP49217.1;Parent=gene-CLI77_06130;Dbxref=NCBI_GP:PDP49217.1;Name=PDP49217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584497.1;locus_tag=CLI77_06130;product=peptidylprolyl isomerase;protein_id=PDP49217.1;transl_table=11 NSLS01000017.1 Genbank pseudogene 24345 24731 . - . ID=gene-CLI77_06135;Name=CLI77_06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06135;pseudo=true NSLS01000017.1 Protein Homology CDS 24345 24731 . - 0 ID=cds-CLI77_06135;Parent=gene-CLI77_06135;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815970.1;locus_tag=CLI77_06135;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000017.1 Genbank gene 24839 26947 . - . ID=gene-CLI77_06140;Name=CLI77_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06140 NSLS01000017.1 Protein Homology CDS 24839 26947 . - 0 ID=cds-PDP49218.1;Parent=gene-CLI77_06140;Dbxref=NCBI_GP:PDP49218.1;Name=PDP49218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584501.1;locus_tag=CLI77_06140;product=hypothetical protein;protein_id=PDP49218.1;transl_table=11 NSLS01000017.1 Genbank gene 27152 28489 . - . ID=gene-CLI77_06145;Name=CLI77_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06145 NSLS01000017.1 Protein Homology CDS 27152 28489 . - 0 ID=cds-PDP49219.1;Parent=gene-CLI77_06145;Dbxref=NCBI_GP:PDP49219.1;Name=PDP49219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956255.1;locus_tag=CLI77_06145;product=NADP-specific glutamate dehydrogenase;protein_id=PDP49219.1;transl_table=11 NSLS01000017.1 Genbank gene 29178 30134 . - . ID=gene-CLI77_06150;Name=CLI77_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06150 NSLS01000017.1 Protein Homology CDS 29178 30134 . - 0 ID=cds-PDP49220.1;Parent=gene-CLI77_06150;Dbxref=NCBI_GP:PDP49220.1;Name=PDP49220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366250.1;locus_tag=CLI77_06150;product=UDP-glucose 4-epimerase;protein_id=PDP49220.1;transl_table=11 NSLS01000017.1 Genbank gene 30450 31160 . + . ID=gene-CLI77_06155;Name=CLI77_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06155 NSLS01000017.1 Protein Homology CDS 30450 31160 . + 0 ID=cds-PDP49221.1;Parent=gene-CLI77_06155;Dbxref=NCBI_GP:PDP49221.1;Name=PDP49221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458223.1;locus_tag=CLI77_06155;product=cation-binding protein;protein_id=PDP49221.1;transl_table=11 NSLS01000017.1 Genbank gene 31157 31756 . + . ID=gene-CLI77_06160;Name=CLI77_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06160 NSLS01000017.1 Protein Homology CDS 31157 31756 . + 0 ID=cds-PDP49222.1;Parent=gene-CLI77_06160;Dbxref=NCBI_GP:PDP49222.1;Name=PDP49222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458224.1;locus_tag=CLI77_06160;product=DNA-binding response regulator;protein_id=PDP49222.1;transl_table=11 NSLS01000017.1 Genbank gene 31774 32457 . - . ID=gene-CLI77_06165;Name=CLI77_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06165 NSLS01000017.1 Protein Homology CDS 31774 32457 . - 0 ID=cds-PDP49223.1;Parent=gene-CLI77_06165;Dbxref=NCBI_GP:PDP49223.1;Name=PDP49223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874405.1;locus_tag=CLI77_06165;product=pseudouridine synthase;protein_id=PDP49223.1;transl_table=11 NSLS01000017.1 Genbank gene 32501 33247 . - . ID=gene-CLI77_06170;Name=CLI77_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06170 NSLS01000017.1 Protein Homology CDS 32501 33247 . - 0 ID=cds-PDP49224.1;Parent=gene-CLI77_06170;Dbxref=NCBI_GP:PDP49224.1;Name=PDP49224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101394.1;locus_tag=CLI77_06170;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=PDP49224.1;transl_table=11 NSLS01000017.1 Genbank gene 33331 33966 . - . ID=gene-CLI77_06175;Name=CLI77_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06175 NSLS01000017.1 Protein Homology CDS 33331 33966 . - 0 ID=cds-PDP49225.1;Parent=gene-CLI77_06175;Dbxref=NCBI_GP:PDP49225.1;Name=PDP49225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815979.1;locus_tag=CLI77_06175;product=TetR/AcrR family transcriptional regulator;protein_id=PDP49225.1;transl_table=11 NSLS01000017.1 Genbank gene 34190 34263 . - . ID=gene-CLI77_06180;Name=CLI77_06180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06180 NSLS01000017.1 tRNAscan-SE tRNA 34190 34263 . - . ID=rna-CLI77_06180;Parent=gene-CLI77_06180;anticodon=(pos:complement(34229..34231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06180;product=tRNA-Gln NSLS01000017.1 tRNAscan-SE exon 34190 34263 . - . ID=exon-CLI77_06180-1;Parent=rna-CLI77_06180;anticodon=(pos:complement(34229..34231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06180;product=tRNA-Gln NSLS01000017.1 Genbank gene 34542 36329 . + . ID=gene-CLI77_06185;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CLI77_06185 NSLS01000017.1 Protein Homology CDS 34542 36329 . + 0 ID=cds-PDP49226.1;Parent=gene-CLI77_06185;Dbxref=NCBI_GP:PDP49226.1;Name=PDP49226.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004325757.1;locus_tag=CLI77_06185;product=elongation factor 4;protein_id=PDP49226.1;transl_table=11 NSLS01000017.1 Genbank gene 36364 37950 . + . ID=gene-CLI77_06190;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CLI77_06190 NSLS01000017.1 Protein Homology CDS 36364 37950 . + 0 ID=cds-PDP49227.1;Parent=gene-CLI77_06190;Dbxref=NCBI_GP:PDP49227.1;Name=PDP49227.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584511.1;locus_tag=CLI77_06190;product=replicative DNA helicase;protein_id=PDP49227.1;transl_table=11 NSLS01000017.1 Genbank gene 38507 39184 . - . ID=gene-CLI77_06195;Name=CLI77_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06195 NSLS01000017.1 Protein Homology CDS 38507 39184 . - 0 ID=cds-PDP49228.1;Parent=gene-CLI77_06195;Dbxref=NCBI_GP:PDP49228.1;Name=PDP49228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012593984.1;locus_tag=CLI77_06195;product=hypothetical protein;protein_id=PDP49228.1;transl_table=11 NSLS01000017.1 Genbank gene 39181 40302 . - . ID=gene-CLI77_06200;Name=CLI77_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06200 NSLS01000017.1 Protein Homology CDS 39181 40302 . - 0 ID=cds-PDP49233.1;Parent=gene-CLI77_06200;Dbxref=NCBI_GP:PDP49233.1;Name=PDP49233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008174235.1;locus_tag=CLI77_06200;product=hypothetical protein;protein_id=PDP49233.1;transl_table=11 NSLS01000017.1 Genbank gene 42573 45203 . + . ID=gene-CLI77_06205;Name=CLI77_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06205 NSLS01000017.1 Protein Homology CDS 42573 45203 . + 0 ID=cds-PDP49229.1;Parent=gene-CLI77_06205;Dbxref=NCBI_GP:PDP49229.1;Name=PDP49229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874783.1;locus_tag=CLI77_06205;product=alanine--tRNA ligase;protein_id=PDP49229.1;transl_table=11 NSLS01000017.1 Genbank gene 45218 46279 . + . ID=gene-CLI77_06210;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CLI77_06210 NSLS01000017.1 Protein Homology CDS 45218 46279 . + 0 ID=cds-PDP49230.1;Parent=gene-CLI77_06210;Dbxref=NCBI_GP:PDP49230.1;Name=PDP49230.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584514.1;locus_tag=CLI77_06210;product=3-dehydroquinate synthase;protein_id=PDP49230.1;transl_table=11 NSLS01000017.1 Genbank gene 46315 46389 . + . ID=gene-CLI77_06215;Name=CLI77_06215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06215 NSLS01000017.1 tRNAscan-SE tRNA 46315 46389 . + . ID=rna-CLI77_06215;Parent=gene-CLI77_06215;anticodon=(pos:46350..46352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06215;product=tRNA-Pro NSLS01000017.1 tRNAscan-SE exon 46315 46389 . + . ID=exon-CLI77_06215-1;Parent=rna-CLI77_06215;anticodon=(pos:46350..46352);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06215;product=tRNA-Pro ##sequence-region NSLS01000018.1 1 45331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000018.1 Genbank region 1 45331 . + . ID=NSLS01000018.1:1..45331;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000018.1 Genbank gene 153 392 . - . ID=gene-CLI77_06220;Name=CLI77_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06220 NSLS01000018.1 Protein Homology CDS 153 392 . - 0 ID=cds-PDP49149.1;Parent=gene-CLI77_06220;Dbxref=NCBI_GP:PDP49149.1;Name=PDP49149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458234.1;locus_tag=CLI77_06220;product=hypothetical protein;protein_id=PDP49149.1;transl_table=11 NSLS01000018.1 Genbank gene 677 1132 . + . ID=gene-CLI77_06225;Name=CLI77_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06225 NSLS01000018.1 Protein Homology CDS 677 1132 . + 0 ID=cds-PDP49150.1;Parent=gene-CLI77_06225;Dbxref=NCBI_GP:PDP49150.1;Name=PDP49150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874193.1;locus_tag=CLI77_06225;product=thioredoxin-dependent thiol peroxidase;protein_id=PDP49150.1;transl_table=11 NSLS01000018.1 Genbank gene 1153 2175 . + . ID=gene-CLI77_06230;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CLI77_06230 NSLS01000018.1 Protein Homology CDS 1153 2175 . + 0 ID=cds-PDP49151.1;Parent=gene-CLI77_06230;Dbxref=NCBI_GP:PDP49151.1;Name=PDP49151.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584116.1;locus_tag=CLI77_06230;product=DNA recombination/repair protein RecA;protein_id=PDP49151.1;transl_table=11 NSLS01000018.1 Genbank gene 2249 3214 . + . ID=gene-CLI77_06235;Name=CLI77_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06235 NSLS01000018.1 Protein Homology CDS 2249 3214 . + 0 ID=cds-PDP49152.1;Parent=gene-CLI77_06235;Dbxref=NCBI_GP:PDP49152.1;Name=PDP49152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965636.1;locus_tag=CLI77_06235;product=GNAT family N-acetyltransferase;protein_id=PDP49152.1;transl_table=11 NSLS01000018.1 Genbank gene 3211 4572 . + . ID=gene-CLI77_06240;Name=CLI77_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06240 NSLS01000018.1 Protein Homology CDS 3211 4572 . + 0 ID=cds-PDP49153.1;Parent=gene-CLI77_06240;Dbxref=NCBI_GP:PDP49153.1;Name=PDP49153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584118.1;locus_tag=CLI77_06240;product=hypothetical protein;protein_id=PDP49153.1;transl_table=11 NSLS01000018.1 Genbank gene 4569 5819 . + . ID=gene-CLI77_06245;Name=CLI77_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06245 NSLS01000018.1 Protein Homology CDS 4569 5819 . + 0 ID=cds-PDP49154.1;Parent=gene-CLI77_06245;Dbxref=NCBI_GP:PDP49154.1;Name=PDP49154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584119.1;locus_tag=CLI77_06245;product=glycosyl transferase family 1;protein_id=PDP49154.1;transl_table=11 NSLS01000018.1 Genbank gene 5835 6935 . + . ID=gene-CLI77_06250;Name=CLI77_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06250 NSLS01000018.1 Protein Homology CDS 5835 6935 . + 0 ID=cds-PDP49155.1;Parent=gene-CLI77_06250;Dbxref=NCBI_GP:PDP49155.1;Name=PDP49155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584120.1;locus_tag=CLI77_06250;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=PDP49155.1;transl_table=11 NSLS01000018.1 Genbank gene 6932 7696 . + . ID=gene-CLI77_06255;Name=CLI77_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06255 NSLS01000018.1 Protein Homology CDS 6932 7696 . + 0 ID=cds-PDP49156.1;Parent=gene-CLI77_06255;Dbxref=NCBI_GP:PDP49156.1;Name=PDP49156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457988.1;locus_tag=CLI77_06255;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=PDP49156.1;transl_table=11 NSLS01000018.1 Genbank gene 8190 9386 . + . ID=gene-CLI77_06260;Name=CLI77_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06260 NSLS01000018.1 Protein Homology CDS 8190 9386 . + 0 ID=cds-PDP49157.1;Parent=gene-CLI77_06260;Dbxref=NCBI_GP:PDP49157.1;Name=PDP49157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584123.1;locus_tag=CLI77_06260;product=aminopeptidase P family protein;protein_id=PDP49157.1;transl_table=11 NSLS01000018.1 Genbank gene 9422 11113 . + . ID=gene-CLI77_06265;Name=CLI77_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06265 NSLS01000018.1 Protein Homology CDS 9422 11113 . + 0 ID=cds-PDP49158.1;Parent=gene-CLI77_06265;Dbxref=NCBI_GP:PDP49158.1;Name=PDP49158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874233.1;locus_tag=CLI77_06265;product=alkaline phosphatase;protein_id=PDP49158.1;transl_table=11 NSLS01000018.1 Genbank gene 12242 13894 . - . ID=gene-CLI77_06270;Name=CLI77_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06270 NSLS01000018.1 Protein Homology CDS 12242 13894 . - 0 ID=cds-PDP49159.1;Parent=gene-CLI77_06270;Dbxref=NCBI_GP:PDP49159.1;Name=PDP49159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875197.1;locus_tag=CLI77_06270;product=hydroxylamine reductase;protein_id=PDP49159.1;transl_table=11 NSLS01000018.1 Genbank gene 14118 14810 . - . ID=gene-CLI77_06275;Name=CLI77_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06275 NSLS01000018.1 Protein Homology CDS 14118 14810 . - 0 ID=cds-PDP49160.1;Parent=gene-CLI77_06275;Dbxref=NCBI_GP:PDP49160.1;Name=PDP49160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584127.1;locus_tag=CLI77_06275;product=hypothetical protein;protein_id=PDP49160.1;transl_table=11 NSLS01000018.1 Genbank gene 14986 15062 . + . ID=gene-CLI77_06280;Name=CLI77_06280;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06280 NSLS01000018.1 tRNAscan-SE tRNA 14986 15062 . + . ID=rna-CLI77_06280;Parent=gene-CLI77_06280;anticodon=(pos:15020..15022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06280;product=tRNA-Met NSLS01000018.1 tRNAscan-SE exon 14986 15062 . + . ID=exon-CLI77_06280-1;Parent=rna-CLI77_06280;anticodon=(pos:15020..15022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06280;product=tRNA-Met NSLS01000018.1 Genbank gene 15186 18392 . + . ID=gene-CLI77_06285;Name=CLI77_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06285 NSLS01000018.1 Protein Homology CDS 15186 18392 . + 0 ID=cds-PDP49161.1;Parent=gene-CLI77_06285;Dbxref=NCBI_GP:PDP49161.1;Name=PDP49161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584128.1;locus_tag=CLI77_06285;product=beta-galactosidase;protein_id=PDP49161.1;transl_table=11 NSLS01000018.1 Genbank gene 18857 20551 . - . ID=gene-CLI77_06290;Name=CLI77_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06290 NSLS01000018.1 Protein Homology CDS 18857 20551 . - 0 ID=cds-PDP49162.1;Parent=gene-CLI77_06290;Dbxref=NCBI_GP:PDP49162.1;Name=PDP49162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584129.1;locus_tag=CLI77_06290;product=alpha-amylase;protein_id=PDP49162.1;transl_table=11 NSLS01000018.1 Genbank gene 20548 21339 . - . ID=gene-CLI77_06295;Name=CLI77_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06295 NSLS01000018.1 Protein Homology CDS 20548 21339 . - 0 ID=cds-PDP49163.1;Parent=gene-CLI77_06295;Dbxref=NCBI_GP:PDP49163.1;Name=PDP49163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875170.1;locus_tag=CLI77_06295;product=phospholipase;protein_id=PDP49163.1;transl_table=11 NSLS01000018.1 Genbank gene 21486 22649 . - . ID=gene-CLI77_06300;Name=CLI77_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06300 NSLS01000018.1 Protein Homology CDS 21486 22649 . - 0 ID=cds-PDP49164.1;Parent=gene-CLI77_06300;Dbxref=NCBI_GP:PDP49164.1;Name=PDP49164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875221.1;locus_tag=CLI77_06300;product=cytochrome C oxidase assembly protein;protein_id=PDP49164.1;transl_table=11 NSLS01000018.1 Genbank gene 22695 24284 . - . ID=gene-CLI77_06305;Name=CLI77_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06305 NSLS01000018.1 Protein Homology CDS 22695 24284 . - 0 ID=cds-PDP49165.1;Parent=gene-CLI77_06305;Dbxref=NCBI_GP:PDP49165.1;Name=PDP49165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584132.1;locus_tag=CLI77_06305;product=cytochrome ubiquinol oxidase subunit I;protein_id=PDP49165.1;transl_table=11 NSLS01000018.1 Genbank gene 24304 24552 . - . ID=gene-CLI77_06310;Name=CLI77_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06310 NSLS01000018.1 Protein Homology CDS 24304 24552 . - 0 ID=cds-PDP49166.1;Parent=gene-CLI77_06310;Dbxref=NCBI_GP:PDP49166.1;Name=PDP49166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584133.1;locus_tag=CLI77_06310;product=DUF4492 domain-containing protein;protein_id=PDP49166.1;transl_table=11 NSLS01000018.1 Genbank gene 24732 26957 . - . ID=gene-CLI77_06315;Name=CLI77_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06315 NSLS01000018.1 Protein Homology CDS 24732 26957 . - 0 ID=cds-PDP49167.1;Parent=gene-CLI77_06315;Dbxref=NCBI_GP:PDP49167.1;Name=PDP49167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965329.1;locus_tag=CLI77_06315;product=alpha-mannosidase;protein_id=PDP49167.1;transl_table=11 NSLS01000018.1 Genbank gene 27077 27619 . - . ID=gene-CLI77_06320;Name=CLI77_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06320 NSLS01000018.1 Protein Homology CDS 27077 27619 . - 0 ID=cds-PDP49168.1;Parent=gene-CLI77_06320;Dbxref=NCBI_GP:PDP49168.1;Name=PDP49168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965330.1;locus_tag=CLI77_06320;product=arginine decarboxylase;protein_id=PDP49168.1;transl_table=11 NSLS01000018.1 Genbank pseudogene 28000 28191 . - . ID=gene-CLI77_06325;Name=CLI77_06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06325;pseudo=true NSLS01000018.1 Protein Homology CDS 28000 28191 . - 0 ID=cds-CLI77_06325;Parent=gene-CLI77_06325;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873428.1;locus_tag=CLI77_06325;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000018.1 Genbank gene 28645 29097 . + . ID=gene-CLI77_06330;Name=CLI77_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06330 NSLS01000018.1 Protein Homology CDS 28645 29097 . + 0 ID=cds-PDP49169.1;Parent=gene-CLI77_06330;Dbxref=NCBI_GP:PDP49169.1;Name=PDP49169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875225.1;locus_tag=CLI77_06330;product=hypothetical protein;protein_id=PDP49169.1;transl_table=11 NSLS01000018.1 Genbank gene 29209 29700 . - . ID=gene-CLI77_06335;Name=CLI77_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06335 NSLS01000018.1 Protein Homology CDS 29209 29700 . - 0 ID=cds-PDP49170.1;Parent=gene-CLI77_06335;Dbxref=NCBI_GP:PDP49170.1;Name=PDP49170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815693.1;locus_tag=CLI77_06335;product=DNA-deoxyinosine glycosylase;protein_id=PDP49170.1;transl_table=11 NSLS01000018.1 Genbank gene 29717 31018 . - . ID=gene-CLI77_06340;Name=CLI77_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06340 NSLS01000018.1 Protein Homology CDS 29717 31018 . - 0 ID=cds-PDP49171.1;Parent=gene-CLI77_06340;Dbxref=NCBI_GP:PDP49171.1;Name=PDP49171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584141.1;locus_tag=CLI77_06340;product=serine dehydratase subunit alpha family protein;protein_id=PDP49171.1;transl_table=11 NSLS01000018.1 Genbank gene 31073 31645 . - . ID=gene-CLI77_06345;Name=CLI77_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06345 NSLS01000018.1 Protein Homology CDS 31073 31645 . - 0 ID=cds-PDP49172.1;Parent=gene-CLI77_06345;Dbxref=NCBI_GP:PDP49172.1;Name=PDP49172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875195.1;locus_tag=CLI77_06345;product=hypothetical protein;protein_id=PDP49172.1;transl_table=11 NSLS01000018.1 Genbank gene 31770 33335 . - . ID=gene-CLI77_06350;Name=CLI77_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06350 NSLS01000018.1 Protein Homology CDS 31770 33335 . - 0 ID=cds-PDP49173.1;Parent=gene-CLI77_06350;Dbxref=NCBI_GP:PDP49173.1;Name=PDP49173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815696.1;locus_tag=CLI77_06350;product=sugar transporter;protein_id=PDP49173.1;transl_table=11 NSLS01000018.1 Genbank pseudogene 33364 33666 . - . ID=gene-CLI77_06355;Name=CLI77_06355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06355;pseudo=true NSLS01000018.1 Protein Homology CDS 33364 33666 . - 0 ID=cds-CLI77_06355;Parent=gene-CLI77_06355;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584144.1;locus_tag=CLI77_06355;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000018.1 Genbank gene 33683 34396 . - . ID=gene-CLI77_06360;Name=CLI77_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06360 NSLS01000018.1 Protein Homology CDS 33683 34396 . - 0 ID=cds-PDP49174.1;Parent=gene-CLI77_06360;Dbxref=NCBI_GP:PDP49174.1;Name=PDP49174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964571.1;locus_tag=CLI77_06360;product=hypothetical protein;protein_id=PDP49174.1;transl_table=11 NSLS01000018.1 Genbank gene 34614 35006 . + . ID=gene-CLI77_06365;Name=CLI77_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06365 NSLS01000018.1 Protein Homology CDS 34614 35006 . + 0 ID=cds-PDP49175.1;Parent=gene-CLI77_06365;Dbxref=NCBI_GP:PDP49175.1;Name=PDP49175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875191.1;locus_tag=CLI77_06365;product=hypothetical protein;protein_id=PDP49175.1;transl_table=11 NSLS01000018.1 Genbank gene 35549 35625 . - . ID=gene-CLI77_06370;Name=CLI77_06370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06370 NSLS01000018.1 tRNAscan-SE tRNA 35549 35625 . - . ID=rna-CLI77_06370;Parent=gene-CLI77_06370;anticodon=(pos:complement(35589..35591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06370;product=tRNA-Ala NSLS01000018.1 tRNAscan-SE exon 35549 35625 . - . ID=exon-CLI77_06370-1;Parent=rna-CLI77_06370;anticodon=(pos:complement(35589..35591));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06370;product=tRNA-Ala NSLS01000018.1 Genbank gene 35681 36076 . - . ID=gene-CLI77_06375;Name=CLI77_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06375 NSLS01000018.1 Protein Homology CDS 35681 36076 . - 0 ID=cds-PDP49176.1;Parent=gene-CLI77_06375;Dbxref=NCBI_GP:PDP49176.1;Name=PDP49176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964577.1;locus_tag=CLI77_06375;product=GtrA family protein;protein_id=PDP49176.1;transl_table=11 NSLS01000018.1 Genbank gene 36042 36797 . - . ID=gene-CLI77_06380;Name=CLI77_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06380 NSLS01000018.1 Protein Homology CDS 36042 36797 . - 0 ID=cds-PDP49177.1;Parent=gene-CLI77_06380;Dbxref=NCBI_GP:PDP49177.1;Name=PDP49177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584150.1;locus_tag=CLI77_06380;product=hypothetical protein;protein_id=PDP49177.1;transl_table=11 NSLS01000018.1 Genbank gene 36964 38313 . - . ID=gene-CLI77_06385;Name=CLI77_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06385 NSLS01000018.1 Protein Homology CDS 36964 38313 . - 0 ID=cds-PDP49178.1;Parent=gene-CLI77_06385;Dbxref=NCBI_GP:PDP49178.1;Name=PDP49178.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875196.1;locus_tag=CLI77_06385;product=dihydroorotase;protein_id=PDP49178.1;transl_table=11 NSLS01000018.1 Genbank gene 38324 39061 . - . ID=gene-CLI77_06390;Name=CLI77_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06390 NSLS01000018.1 Protein Homology CDS 38324 39061 . - 0 ID=cds-PDP49179.1;Parent=gene-CLI77_06390;Dbxref=NCBI_GP:PDP49179.1;Name=PDP49179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457968.1;locus_tag=CLI77_06390;product=polyprenol monophosphomannose synthase;protein_id=PDP49179.1;transl_table=11 NSLS01000018.1 Genbank gene 39207 40430 . - . ID=gene-CLI77_06395;Name=CLI77_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06395 NSLS01000018.1 Protein Homology CDS 39207 40430 . - 0 ID=cds-PDP49180.1;Parent=gene-CLI77_06395;Dbxref=NCBI_GP:PDP49180.1;Name=PDP49180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815701.1;locus_tag=CLI77_06395;product=ABC transporter permease;protein_id=PDP49180.1;transl_table=11 NSLS01000018.1 Genbank gene 40458 40793 . - . ID=gene-CLI77_06400;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CLI77_06400 NSLS01000018.1 Protein Homology CDS 40458 40793 . - 0 ID=cds-PDP49181.1;Parent=gene-CLI77_06400;Dbxref=NCBI_GP:PDP49181.1;Name=PDP49181.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875201.1;locus_tag=CLI77_06400;product=ribosome-binding factor A;protein_id=PDP49181.1;transl_table=11 NSLS01000018.1 Genbank gene 40832 41647 . - . ID=gene-CLI77_06405;Name=CLI77_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06405 NSLS01000018.1 Protein Homology CDS 40832 41647 . - 0 ID=cds-PDP49182.1;Parent=gene-CLI77_06405;Dbxref=NCBI_GP:PDP49182.1;Name=PDP49182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815702.1;locus_tag=CLI77_06405;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=PDP49182.1;transl_table=11 NSLS01000018.1 Genbank gene 41644 42258 . - . ID=gene-CLI77_06410;Name=CLI77_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06410 NSLS01000018.1 Protein Homology CDS 41644 42258 . - 0 ID=cds-PDP49183.1;Parent=gene-CLI77_06410;Dbxref=NCBI_GP:PDP49183.1;Name=PDP49183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584156.1;locus_tag=CLI77_06410;product=thymidine kinase;protein_id=PDP49183.1;transl_table=11 NSLS01000018.1 Genbank gene 42386 42613 . - . ID=gene-CLI77_06415;Name=CLI77_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06415 NSLS01000018.1 Protein Homology CDS 42386 42613 . - 0 ID=cds-PDP49184.1;Parent=gene-CLI77_06415;Dbxref=NCBI_GP:PDP49184.1;Name=PDP49184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584157.1;locus_tag=CLI77_06415;product=hypothetical protein;protein_id=PDP49184.1;transl_table=11 NSLS01000018.1 Genbank gene 42613 43029 . - . ID=gene-CLI77_06420;Name=CLI77_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06420 NSLS01000018.1 Protein Homology CDS 42613 43029 . - 0 ID=cds-PDP49185.1;Parent=gene-CLI77_06420;Dbxref=NCBI_GP:PDP49185.1;Name=PDP49185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584158.1;locus_tag=CLI77_06420;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=PDP49185.1;transl_table=11 NSLS01000018.1 Genbank gene 43041 44597 . - . ID=gene-CLI77_06425;Name=CLI77_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06425 NSLS01000018.1 Protein Homology CDS 43041 44597 . - 0 ID=cds-PDP49186.1;Parent=gene-CLI77_06425;Dbxref=NCBI_GP:PDP49186.1;Name=PDP49186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584159.1;locus_tag=CLI77_06425;product=two-component system response regulator;protein_id=PDP49186.1;transl_table=11 NSLS01000018.1 Genbank gene 44646 45074 . - . ID=gene-CLI77_06430;Name=CLI77_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06430 NSLS01000018.1 Protein Homology CDS 44646 45074 . - 0 ID=cds-PDP49187.1;Parent=gene-CLI77_06430;Dbxref=NCBI_GP:PDP49187.1;Name=PDP49187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875231.1;locus_tag=CLI77_06430;product=hypothetical protein;protein_id=PDP49187.1;transl_table=11 ##sequence-region NSLS01000019.1 1 45029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000019.1 Genbank region 1 45029 . + . ID=NSLS01000019.1:1..45029;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000019.1 Genbank gene 29 133 . + . ID=gene-CLI77_06435;Name=CLI77_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06435 NSLS01000019.1 Protein Homology CDS 29 133 . + 0 ID=cds-PDP49131.1;Parent=gene-CLI77_06435;Dbxref=NCBI_GP:PDP49131.1;Name=PDP49131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_06435;product=DNA methylase;protein_id=PDP49131.1;transl_table=11 NSLS01000019.1 Genbank gene 578 1144 . + . ID=gene-CLI77_06440;Name=CLI77_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06440 NSLS01000019.1 Protein Homology CDS 578 1144 . + 0 ID=cds-PDP49132.1;Parent=gene-CLI77_06440;Dbxref=NCBI_GP:PDP49132.1;Name=PDP49132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873412.1;locus_tag=CLI77_06440;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP49132.1;transl_table=11 NSLS01000019.1 Genbank gene 1192 1602 . + . ID=gene-CLI77_06445;Name=CLI77_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06445 NSLS01000019.1 Protein Homology CDS 1192 1602 . + 0 ID=cds-PDP49133.1;Parent=gene-CLI77_06445;Dbxref=NCBI_GP:PDP49133.1;Name=PDP49133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873417.1;locus_tag=CLI77_06445;product=hypothetical protein;protein_id=PDP49133.1;transl_table=11 NSLS01000019.1 Genbank gene 1575 2105 . + . ID=gene-CLI77_06450;Name=CLI77_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06450 NSLS01000019.1 Protein Homology CDS 1575 2105 . + 0 ID=cds-PDP49098.1;Parent=gene-CLI77_06450;Dbxref=NCBI_GP:PDP49098.1;Name=PDP49098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873416.1;locus_tag=CLI77_06450;product=hypothetical protein;protein_id=PDP49098.1;transl_table=11 NSLS01000019.1 Genbank gene 2156 2728 . + . ID=gene-CLI77_06455;Name=CLI77_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06455 NSLS01000019.1 Protein Homology CDS 2156 2728 . + 0 ID=cds-PDP49099.1;Parent=gene-CLI77_06455;Dbxref=NCBI_GP:PDP49099.1;Name=PDP49099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816670.1;locus_tag=CLI77_06455;product=peptidylprolyl isomerase;protein_id=PDP49099.1;transl_table=11 NSLS01000019.1 Genbank gene 2878 3984 . + . ID=gene-CLI77_06460;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CLI77_06460 NSLS01000019.1 Protein Homology CDS 2878 3984 . + 0 ID=cds-PDP49100.1;Parent=gene-CLI77_06460;Dbxref=NCBI_GP:PDP49100.1;Name=PDP49100.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458031.1;locus_tag=CLI77_06460;product=chorismate synthase;protein_id=PDP49100.1;transl_table=11 NSLS01000019.1 Genbank gene 4210 4284 . - . ID=gene-CLI77_06465;Name=CLI77_06465;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06465 NSLS01000019.1 tRNAscan-SE tRNA 4210 4284 . - . ID=rna-CLI77_06465;Parent=gene-CLI77_06465;anticodon=(pos:complement(4249..4251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06465;product=tRNA-Arg NSLS01000019.1 tRNAscan-SE exon 4210 4284 . - . ID=exon-CLI77_06465-1;Parent=rna-CLI77_06465;anticodon=(pos:complement(4249..4251));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06465;product=tRNA-Arg NSLS01000019.1 Genbank gene 4357 6015 . - . ID=gene-CLI77_06470;Name=CLI77_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06470 NSLS01000019.1 Protein Homology CDS 4357 6015 . - 0 ID=cds-PDP49101.1;Parent=gene-CLI77_06470;Dbxref=NCBI_GP:PDP49101.1;Name=PDP49101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965690.1;locus_tag=CLI77_06470;product=dipeptidase;protein_id=PDP49101.1;transl_table=11 NSLS01000019.1 Genbank gene 6948 7127 . + . ID=gene-CLI77_06475;Name=CLI77_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06475 NSLS01000019.1 Protein Homology CDS 6948 7127 . + 0 ID=cds-PDP49102.1;Parent=gene-CLI77_06475;Dbxref=NCBI_GP:PDP49102.1;Name=PDP49102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458029.1;locus_tag=CLI77_06475;product=hypothetical protein;protein_id=PDP49102.1;transl_table=11 NSLS01000019.1 Genbank gene 7112 8299 . - . ID=gene-CLI77_06480;Name=CLI77_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06480 NSLS01000019.1 Protein Homology CDS 7112 8299 . - 0 ID=cds-PDP49103.1;Parent=gene-CLI77_06480;Dbxref=NCBI_GP:PDP49103.1;Name=PDP49103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585548.1;locus_tag=CLI77_06480;product=capsule biosynthesis protein CapA;protein_id=PDP49103.1;transl_table=11 NSLS01000019.1 Genbank gene 8309 8803 . - . ID=gene-CLI77_06485;Name=CLI77_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06485 NSLS01000019.1 Protein Homology CDS 8309 8803 . - 0 ID=cds-PDP49104.1;Parent=gene-CLI77_06485;Dbxref=NCBI_GP:PDP49104.1;Name=PDP49104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458027.1;locus_tag=CLI77_06485;product=phosphodiesterase;protein_id=PDP49104.1;transl_table=11 NSLS01000019.1 Genbank gene 8838 9500 . - . ID=gene-CLI77_06490;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CLI77_06490 NSLS01000019.1 Protein Homology CDS 8838 9500 . - 0 ID=cds-PDP49105.1;Parent=gene-CLI77_06490;Dbxref=NCBI_GP:PDP49105.1;Name=PDP49105.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956277.1;locus_tag=CLI77_06490;product=7-cyano-7-deazaguanine synthase QueC;protein_id=PDP49105.1;transl_table=11 NSLS01000019.1 Genbank gene 9904 10749 . + . ID=gene-CLI77_06495;Name=CLI77_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06495 NSLS01000019.1 Protein Homology CDS 9904 10749 . + 0 ID=cds-PDP49106.1;Parent=gene-CLI77_06495;Dbxref=NCBI_GP:PDP49106.1;Name=PDP49106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956276.1;locus_tag=CLI77_06495;product=DUF3298 domain-containing protein;protein_id=PDP49106.1;transl_table=11 NSLS01000019.1 Genbank gene 10774 11448 . + . ID=gene-CLI77_06500;Name=CLI77_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06500 NSLS01000019.1 Protein Homology CDS 10774 11448 . + 0 ID=cds-PDP49107.1;Parent=gene-CLI77_06500;Dbxref=NCBI_GP:PDP49107.1;Name=PDP49107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964420.1;locus_tag=CLI77_06500;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=PDP49107.1;transl_table=11 NSLS01000019.1 Genbank gene 11445 12089 . + . ID=gene-CLI77_06505;Name=CLI77_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06505 NSLS01000019.1 Protein Homology CDS 11445 12089 . + 0 ID=cds-PDP49108.1;Parent=gene-CLI77_06505;Dbxref=NCBI_GP:PDP49108.1;Name=PDP49108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964421.1;locus_tag=CLI77_06505;product=MBL fold hydrolase;protein_id=PDP49108.1;transl_table=11 NSLS01000019.1 Genbank gene 12094 14961 . + . ID=gene-CLI77_06510;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CLI77_06510 NSLS01000019.1 Protein Homology CDS 12094 14961 . + 0 ID=cds-PDP49109.1;Parent=gene-CLI77_06510;Dbxref=NCBI_GP:PDP49109.1;Name=PDP49109.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816680.1;locus_tag=CLI77_06510;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=PDP49109.1;transl_table=11 NSLS01000019.1 Genbank gene 15164 16495 . + . ID=gene-CLI77_06515;Name=CLI77_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06515 NSLS01000019.1 Protein Homology CDS 15164 16495 . + 0 ID=cds-PDP49110.1;Parent=gene-CLI77_06515;Dbxref=NCBI_GP:PDP49110.1;Name=PDP49110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458021.1;locus_tag=CLI77_06515;product=DUF3078 domain-containing protein;protein_id=PDP49110.1;transl_table=11 NSLS01000019.1 Genbank gene 16512 17927 . - . ID=gene-CLI77_06520;Name=CLI77_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06520 NSLS01000019.1 Protein Homology CDS 16512 17927 . - 0 ID=cds-PDP49111.1;Parent=gene-CLI77_06520;Dbxref=NCBI_GP:PDP49111.1;Name=PDP49111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585557.1;locus_tag=CLI77_06520;product=helicase;protein_id=PDP49111.1;transl_table=11 NSLS01000019.1 Genbank gene 18059 18691 . + . ID=gene-CLI77_06525;Name=CLI77_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06525 NSLS01000019.1 Protein Homology CDS 18059 18691 . + 0 ID=cds-PDP49112.1;Parent=gene-CLI77_06525;Dbxref=NCBI_GP:PDP49112.1;Name=PDP49112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964425.1;locus_tag=CLI77_06525;product=hypothetical protein;protein_id=PDP49112.1;transl_table=11 NSLS01000019.1 Genbank gene 18709 19524 . + . ID=gene-CLI77_06530;Name=CLI77_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06530 NSLS01000019.1 Protein Homology CDS 18709 19524 . + 0 ID=cds-PDP49113.1;Parent=gene-CLI77_06530;Dbxref=NCBI_GP:PDP49113.1;Name=PDP49113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874850.1;locus_tag=CLI77_06530;product=DUF3822 domain-containing protein;protein_id=PDP49113.1;transl_table=11 NSLS01000019.1 Genbank gene 19561 20100 . + . ID=gene-CLI77_06535;Name=CLI77_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06535 NSLS01000019.1 Protein Homology CDS 19561 20100 . + 0 ID=cds-PDP49114.1;Parent=gene-CLI77_06535;Dbxref=NCBI_GP:PDP49114.1;Name=PDP49114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458018.1;locus_tag=CLI77_06535;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=PDP49114.1;transl_table=11 NSLS01000019.1 Genbank gene 20950 22749 . - . ID=gene-CLI77_06540;Name=CLI77_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06540 NSLS01000019.1 Protein Homology CDS 20950 22749 . - 0 ID=cds-PDP49115.1;Parent=gene-CLI77_06540;Dbxref=NCBI_GP:PDP49115.1;Name=PDP49115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964428.1;locus_tag=CLI77_06540;product=30S ribosomal protein S1;protein_id=PDP49115.1;transl_table=11 NSLS01000019.1 Genbank gene 23334 23792 . - . ID=gene-CLI77_06545;Name=CLI77_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06545 NSLS01000019.1 Protein Homology CDS 23334 23792 . - 0 ID=cds-PDP49116.1;Parent=gene-CLI77_06545;Dbxref=NCBI_GP:PDP49116.1;Name=PDP49116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585565.1;locus_tag=CLI77_06545;product=hypothetical protein;protein_id=PDP49116.1;transl_table=11 NSLS01000019.1 Genbank gene 23800 23985 . - . ID=gene-CLI77_06550;Name=CLI77_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06550 NSLS01000019.1 Protein Homology CDS 23800 23985 . - 0 ID=cds-PDP49117.1;Parent=gene-CLI77_06550;Dbxref=NCBI_GP:PDP49117.1;Name=PDP49117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964877.1;locus_tag=CLI77_06550;product=FeoB-associated Cys-rich membrane protein;protein_id=PDP49117.1;transl_table=11 NSLS01000019.1 Genbank gene 24005 26539 . - . ID=gene-CLI77_06555;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CLI77_06555 NSLS01000019.1 Protein Homology CDS 24005 26539 . - 0 ID=cds-PDP49118.1;Parent=gene-CLI77_06555;Dbxref=NCBI_GP:PDP49118.1;Name=PDP49118.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816689.1;locus_tag=CLI77_06555;product=ferrous iron transport protein B;protein_id=PDP49118.1;transl_table=11 NSLS01000019.1 Genbank gene 26876 27058 . - . ID=gene-CLI77_06560;Name=CLI77_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06560 NSLS01000019.1 Protein Homology CDS 26876 27058 . - 0 ID=cds-PDP49134.1;Parent=gene-CLI77_06560;Dbxref=NCBI_GP:PDP49134.1;Name=PDP49134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815535.1;locus_tag=CLI77_06560;product=hypothetical protein;protein_id=PDP49134.1;transl_table=11 NSLS01000019.1 Genbank gene 27136 28857 . + . ID=gene-CLI77_06565;Name=CLI77_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06565 NSLS01000019.1 Protein Homology CDS 27136 28857 . + 0 ID=cds-PDP49135.1;Parent=gene-CLI77_06565;Dbxref=NCBI_GP:PDP49135.1;Name=PDP49135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458012.1;locus_tag=CLI77_06565;product=phospholipase;protein_id=PDP49135.1;transl_table=11 NSLS01000019.1 Genbank gene 28985 30004 . - . ID=gene-CLI77_06570;Name=CLI77_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06570 NSLS01000019.1 Protein Homology CDS 28985 30004 . - 0 ID=cds-PDP49119.1;Parent=gene-CLI77_06570;Dbxref=NCBI_GP:PDP49119.1;Name=PDP49119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458011.1;locus_tag=CLI77_06570;product=branched-chain amino acid aminotransferase;protein_id=PDP49119.1;transl_table=11 NSLS01000019.1 Genbank gene 30143 31216 . - . ID=gene-CLI77_06575;Name=CLI77_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06575 NSLS01000019.1 Protein Homology CDS 30143 31216 . - 0 ID=cds-PDP49120.1;Parent=gene-CLI77_06575;Dbxref=NCBI_GP:PDP49120.1;Name=PDP49120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964872.1;locus_tag=CLI77_06575;product=GDP-L-fucose synthase;protein_id=PDP49120.1;transl_table=11 NSLS01000019.1 Genbank gene 31209 32306 . - . ID=gene-CLI77_06580;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CLI77_06580 NSLS01000019.1 Protein Homology CDS 31209 32306 . - 0 ID=cds-PDP49121.1;Parent=gene-CLI77_06580;Dbxref=NCBI_GP:PDP49121.1;Name=PDP49121.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458009.1;locus_tag=CLI77_06580;product=GDP-mannose 4%2C6-dehydratase;protein_id=PDP49121.1;transl_table=11 NSLS01000019.1 Genbank gene 32830 33312 . + . ID=gene-CLI77_06585;Name=CLI77_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06585 NSLS01000019.1 Protein Homology CDS 32830 33312 . + 0 ID=cds-PDP49122.1;Parent=gene-CLI77_06585;Dbxref=NCBI_GP:PDP49122.1;Name=PDP49122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585574.1;locus_tag=CLI77_06585;product=ferritin;protein_id=PDP49122.1;transl_table=11 NSLS01000019.1 Genbank gene 33420 35408 . - . ID=gene-CLI77_06590;Name=CLI77_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06590 NSLS01000019.1 Protein Homology CDS 33420 35408 . - 0 ID=cds-PDP49123.1;Parent=gene-CLI77_06590;Dbxref=NCBI_GP:PDP49123.1;Name=PDP49123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585575.1;locus_tag=CLI77_06590;product=glucosamine-6-phosphate deaminase;protein_id=PDP49123.1;transl_table=11 NSLS01000019.1 Genbank gene 35566 37728 . - . ID=gene-CLI77_06595;Name=CLI77_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06595 NSLS01000019.1 Protein Homology CDS 35566 37728 . - 0 ID=cds-PDP49124.1;Parent=gene-CLI77_06595;Dbxref=NCBI_GP:PDP49124.1;Name=PDP49124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585576.1;locus_tag=CLI77_06595;product=serine protease;protein_id=PDP49124.1;transl_table=11 NSLS01000019.1 Genbank gene 37791 38246 . - . ID=gene-CLI77_06600;Name=CLI77_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06600 NSLS01000019.1 Protein Homology CDS 37791 38246 . - 0 ID=cds-PDP49125.1;Parent=gene-CLI77_06600;Dbxref=NCBI_GP:PDP49125.1;Name=PDP49125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964865.1;locus_tag=CLI77_06600;product=CYTH domain-containing protein;protein_id=PDP49125.1;transl_table=11 NSLS01000019.1 Genbank gene 38270 39394 . - . ID=gene-CLI77_06605;Name=CLI77_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06605 NSLS01000019.1 Protein Homology CDS 38270 39394 . - 0 ID=cds-PDP49126.1;Parent=gene-CLI77_06605;Dbxref=NCBI_GP:PDP49126.1;Name=PDP49126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457643.1;locus_tag=CLI77_06605;product=DUF2027 domain-containing protein;protein_id=PDP49126.1;transl_table=11 NSLS01000019.1 Genbank gene 39560 40807 . - . ID=gene-CLI77_06610;Name=CLI77_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06610 NSLS01000019.1 Protein Homology CDS 39560 40807 . - 0 ID=cds-PDP49127.1;Parent=gene-CLI77_06610;Dbxref=NCBI_GP:PDP49127.1;Name=PDP49127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277481.1;locus_tag=CLI77_06610;product=DUF1015 domain-containing protein;protein_id=PDP49127.1;transl_table=11 NSLS01000019.1 Genbank gene 40826 41746 . - . ID=gene-CLI77_06615;Name=CLI77_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06615 NSLS01000019.1 Protein Homology CDS 40826 41746 . - 0 ID=cds-PDP49128.1;Parent=gene-CLI77_06615;Dbxref=NCBI_GP:PDP49128.1;Name=PDP49128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457645.1;locus_tag=CLI77_06615;product=3-phosphoglycerate dehydrogenase;protein_id=PDP49128.1;transl_table=11 NSLS01000019.1 Genbank gene 41847 42929 . - . ID=gene-CLI77_06620;Name=CLI77_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06620 NSLS01000019.1 Protein Homology CDS 41847 42929 . - 0 ID=cds-PDP49129.1;Parent=gene-CLI77_06620;Dbxref=NCBI_GP:PDP49129.1;Name=PDP49129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874020.1;locus_tag=CLI77_06620;product=phosphoserine transaminase;protein_id=PDP49129.1;transl_table=11 NSLS01000019.1 Genbank gene 43263 44528 . - . ID=gene-CLI77_06625;Name=CLI77_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06625 NSLS01000019.1 Protein Homology CDS 43263 44528 . - 0 ID=cds-PDP49136.1;Parent=gene-CLI77_06625;Dbxref=NCBI_GP:PDP49136.1;Name=PDP49136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956267.1;locus_tag=CLI77_06625;product=nucleotide sugar dehydrogenase;protein_id=PDP49136.1;transl_table=11 NSLS01000019.1 Genbank gene 44830 45029 . - . ID=gene-CLI77_06630;Name=CLI77_06630;end_range=45029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06630;partial=true NSLS01000019.1 Protein Homology CDS 44830 45029 . - 2 ID=cds-PDP49130.1;Parent=gene-CLI77_06630;Dbxref=NCBI_GP:PDP49130.1;Name=PDP49130.1;end_range=45029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457647.1;locus_tag=CLI77_06630;partial=true;product=histidinol phosphate aminotransferase;protein_id=PDP49130.1;transl_table=11 ##sequence-region NSLS01000001.1 1 293379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000001.1 Genbank region 1 293379 . + . ID=NSLS01000001.1:1..293379;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000001.1 Genbank gene 19 816 . + . ID=gene-CLI77_00005;Name=CLI77_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00005 NSLS01000001.1 Protein Homology CDS 19 816 . + 0 ID=cds-PDP50642.1;Parent=gene-CLI77_00005;Dbxref=NCBI_GP:PDP50642.1;Name=PDP50642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815122.1;locus_tag=CLI77_00005;product=hypothetical protein;protein_id=PDP50642.1;transl_table=11 NSLS01000001.1 Genbank gene 994 1203 . - . ID=gene-CLI77_00010;Name=CLI77_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00010 NSLS01000001.1 Protein Homology CDS 994 1203 . - 0 ID=cds-PDP50418.1;Parent=gene-CLI77_00010;Dbxref=NCBI_GP:PDP50418.1;Name=PDP50418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965474.1;locus_tag=CLI77_00010;product=hypothetical protein;protein_id=PDP50418.1;transl_table=11 NSLS01000001.1 Genbank gene 1469 2350 . + . ID=gene-CLI77_00015;Name=CLI77_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00015 NSLS01000001.1 Protein Homology CDS 1469 2350 . + 0 ID=cds-PDP50419.1;Parent=gene-CLI77_00015;Dbxref=NCBI_GP:PDP50419.1;Name=PDP50419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004330958.1;locus_tag=CLI77_00015;product=class I fructose-bisphosphate aldolase;protein_id=PDP50419.1;transl_table=11 NSLS01000001.1 Genbank gene 2493 5018 . - . ID=gene-CLI77_00020;Name=CLI77_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00020 NSLS01000001.1 Protein Homology CDS 2493 5018 . - 0 ID=cds-PDP50420.1;Parent=gene-CLI77_00020;Dbxref=NCBI_GP:PDP50420.1;Name=PDP50420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458464.1;locus_tag=CLI77_00020;product=S9 family peptidase;protein_id=PDP50420.1;transl_table=11 NSLS01000001.1 Genbank gene 5036 6082 . - . ID=gene-CLI77_00025;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CLI77_00025 NSLS01000001.1 Protein Homology CDS 5036 6082 . - 0 ID=cds-PDP50421.1;Parent=gene-CLI77_00025;Dbxref=NCBI_GP:PDP50421.1;Name=PDP50421.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816104.1;locus_tag=CLI77_00025;product=selenide%2C water dikinase SelD;protein_id=PDP50421.1;transl_table=11 NSLS01000001.1 Genbank gene 6079 6303 . - . ID=gene-CLI77_00030;Name=CLI77_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00030 NSLS01000001.1 Protein Homology CDS 6079 6303 . - 0 ID=cds-PDP50422.1;Parent=gene-CLI77_00030;Dbxref=NCBI_GP:PDP50422.1;Name=PDP50422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965470.1;locus_tag=CLI77_00030;product=DUF3343 domain-containing protein;protein_id=PDP50422.1;transl_table=11 NSLS01000001.1 Genbank gene 6287 7417 . - . ID=gene-CLI77_00035;Name=CLI77_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00035 NSLS01000001.1 Protein Homology CDS 6287 7417 . - 0 ID=cds-PDP50643.1;Parent=gene-CLI77_00035;Dbxref=NCBI_GP:PDP50643.1;Name=PDP50643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965469.1;locus_tag=CLI77_00035;product=aminotransferase;protein_id=PDP50643.1;transl_table=11 NSLS01000001.1 Genbank gene 7554 9374 . - . ID=gene-CLI77_00040;Name=CLI77_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00040 NSLS01000001.1 Protein Homology CDS 7554 9374 . - 0 ID=cds-PDP50423.1;Parent=gene-CLI77_00040;Dbxref=NCBI_GP:PDP50423.1;Name=PDP50423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875390.1;locus_tag=CLI77_00040;product=alpha-1%2C3/4-fucosidase;protein_id=PDP50423.1;transl_table=11 NSLS01000001.1 Genbank gene 9818 11845 . + . ID=gene-CLI77_00045;Name=CLI77_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00045 NSLS01000001.1 Protein Homology CDS 9818 11845 . + 0 ID=cds-PDP50424.1;Parent=gene-CLI77_00045;Dbxref=NCBI_GP:PDP50424.1;Name=PDP50424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584752.1;locus_tag=CLI77_00045;product=transketolase;protein_id=PDP50424.1;transl_table=11 NSLS01000001.1 Genbank gene 11932 12369 . + . ID=gene-CLI77_00050;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=CLI77_00050 NSLS01000001.1 Protein Homology CDS 11932 12369 . + 0 ID=cds-PDP50425.1;Parent=gene-CLI77_00050;Dbxref=NCBI_GP:PDP50425.1;Name=PDP50425.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964259.1;locus_tag=CLI77_00050;product=ribose 5-phosphate isomerase B;protein_id=PDP50425.1;transl_table=11 NSLS01000001.1 Genbank gene 12404 12841 . + . ID=gene-CLI77_00055;Name=CLI77_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00055 NSLS01000001.1 Protein Homology CDS 12404 12841 . + 0 ID=cds-PDP50426.1;Parent=gene-CLI77_00055;Dbxref=NCBI_GP:PDP50426.1;Name=PDP50426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816108.1;locus_tag=CLI77_00055;product=hypothetical protein;protein_id=PDP50426.1;transl_table=11 NSLS01000001.1 Genbank gene 13069 15348 . - . ID=gene-CLI77_00060;Name=CLI77_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00060 NSLS01000001.1 Protein Homology CDS 13069 15348 . - 0 ID=cds-PDP50644.1;Parent=gene-CLI77_00060;Dbxref=NCBI_GP:PDP50644.1;Name=PDP50644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366217.1;locus_tag=CLI77_00060;product=NADP-dependent malic enzyme;protein_id=PDP50644.1;transl_table=11 NSLS01000001.1 Genbank gene 15692 17020 . - . ID=gene-CLI77_00065;Name=CLI77_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00065 NSLS01000001.1 Protein Homology CDS 15692 17020 . - 0 ID=cds-PDP50427.1;Parent=gene-CLI77_00065;Dbxref=NCBI_GP:PDP50427.1;Name=PDP50427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964256.1;locus_tag=CLI77_00065;product=ABC transporter permease;protein_id=PDP50427.1;transl_table=11 NSLS01000001.1 Genbank gene 17042 18418 . - . ID=gene-CLI77_00070;Name=CLI77_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00070 NSLS01000001.1 Protein Homology CDS 17042 18418 . - 0 ID=cds-PDP50428.1;Parent=gene-CLI77_00070;Dbxref=NCBI_GP:PDP50428.1;Name=PDP50428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816113.1;locus_tag=CLI77_00070;product=ABC transporter permease;protein_id=PDP50428.1;transl_table=11 NSLS01000001.1 Genbank gene 18639 19310 . - . ID=gene-CLI77_00075;Name=CLI77_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00075 NSLS01000001.1 Protein Homology CDS 18639 19310 . - 0 ID=cds-PDP50429.1;Parent=gene-CLI77_00075;Dbxref=NCBI_GP:PDP50429.1;Name=PDP50429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584758.1;locus_tag=CLI77_00075;product=ABC transporter ATP-binding protein;protein_id=PDP50429.1;transl_table=11 NSLS01000001.1 Genbank gene 19390 20640 . - . ID=gene-CLI77_00080;Name=CLI77_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00080 NSLS01000001.1 Protein Homology CDS 19390 20640 . - 0 ID=cds-PDP50645.1;Parent=gene-CLI77_00080;Dbxref=NCBI_GP:PDP50645.1;Name=PDP50645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874197.1;locus_tag=CLI77_00080;product=RND transporter;protein_id=PDP50645.1;transl_table=11 NSLS01000001.1 Genbank gene 20903 22408 . + . ID=gene-CLI77_00085;Name=CLI77_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00085 NSLS01000001.1 Protein Homology CDS 20903 22408 . + 0 ID=cds-PDP50430.1;Parent=gene-CLI77_00085;Dbxref=NCBI_GP:PDP50430.1;Name=PDP50430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964253.1;locus_tag=CLI77_00085;product=transporter;protein_id=PDP50430.1;transl_table=11 NSLS01000001.1 Genbank gene 22597 22818 . + . ID=gene-CLI77_00090;Name=CLI77_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00090 NSLS01000001.1 Protein Homology CDS 22597 22818 . + 0 ID=cds-PDP50431.1;Parent=gene-CLI77_00090;Dbxref=NCBI_GP:PDP50431.1;Name=PDP50431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538324.1;locus_tag=CLI77_00090;product=DUF2795 domain-containing protein;protein_id=PDP50431.1;transl_table=11 NSLS01000001.1 Genbank gene 22901 23842 . + . ID=gene-CLI77_00095;Name=CLI77_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00095 NSLS01000001.1 Protein Homology CDS 22901 23842 . + 0 ID=cds-PDP50646.1;Parent=gene-CLI77_00095;Dbxref=NCBI_GP:PDP50646.1;Name=PDP50646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964252.1;locus_tag=CLI77_00095;product=hypothetical protein;protein_id=PDP50646.1;transl_table=11 NSLS01000001.1 Genbank gene 23899 25374 . + . ID=gene-CLI77_00100;Name=CLI77_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00100 NSLS01000001.1 Protein Homology CDS 23899 25374 . + 0 ID=cds-PDP50432.1;Parent=gene-CLI77_00100;Dbxref=NCBI_GP:PDP50432.1;Name=PDP50432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584764.1;locus_tag=CLI77_00100;product=gliding motility-associated lipoprotein GldK;protein_id=PDP50432.1;transl_table=11 NSLS01000001.1 Genbank gene 25415 26344 . + . ID=gene-CLI77_00105;Name=CLI77_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00105 NSLS01000001.1 Protein Homology CDS 25415 26344 . + 0 ID=cds-PDP50433.1;Parent=gene-CLI77_00105;Dbxref=NCBI_GP:PDP50433.1;Name=PDP50433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584765.1;locus_tag=CLI77_00105;product=gliding motility protein GldL;protein_id=PDP50433.1;transl_table=11 NSLS01000001.1 Genbank gene 26348 27898 . + . ID=gene-CLI77_00110;Name=CLI77_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00110 NSLS01000001.1 Protein Homology CDS 26348 27898 . + 0 ID=cds-PDP50434.1;Parent=gene-CLI77_00110;Dbxref=NCBI_GP:PDP50434.1;Name=PDP50434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964249.1;locus_tag=CLI77_00110;product=gliding motility protein GldM;protein_id=PDP50434.1;transl_table=11 NSLS01000001.1 Genbank gene 27907 28986 . + . ID=gene-CLI77_00115;Name=CLI77_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00115 NSLS01000001.1 Protein Homology CDS 27907 28986 . + 0 ID=cds-PDP50435.1;Parent=gene-CLI77_00115;Dbxref=NCBI_GP:PDP50435.1;Name=PDP50435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584767.1;locus_tag=CLI77_00115;product=gliding motility protein GldN;protein_id=PDP50435.1;transl_table=11 NSLS01000001.1 Genbank gene 29180 29737 . + . ID=gene-CLI77_00120;Name=CLI77_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00120 NSLS01000001.1 Protein Homology CDS 29180 29737 . + 0 ID=cds-PDP50436.1;Parent=gene-CLI77_00120;Dbxref=NCBI_GP:PDP50436.1;Name=PDP50436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874188.1;locus_tag=CLI77_00120;product=chromate transporter;protein_id=PDP50436.1;transl_table=11 NSLS01000001.1 Genbank gene 29756 30349 . + . ID=gene-CLI77_00125;Name=CLI77_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00125 NSLS01000001.1 Protein Homology CDS 29756 30349 . + 0 ID=cds-PDP50437.1;Parent=gene-CLI77_00125;Dbxref=NCBI_GP:PDP50437.1;Name=PDP50437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964246.1;locus_tag=CLI77_00125;product=chromate transporter;protein_id=PDP50437.1;transl_table=11 NSLS01000001.1 Genbank gene 30487 31065 . - . ID=gene-CLI77_00130;Name=CLI77_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00130 NSLS01000001.1 Protein Homology CDS 30487 31065 . - 0 ID=cds-PDP50438.1;Parent=gene-CLI77_00130;Dbxref=NCBI_GP:PDP50438.1;Name=PDP50438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874170.1;locus_tag=CLI77_00130;product=peptidoglycan domain protein;protein_id=PDP50438.1;transl_table=11 NSLS01000001.1 Genbank gene 31323 31619 . - . ID=gene-CLI77_00135;Name=CLI77_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00135 NSLS01000001.1 Protein Homology CDS 31323 31619 . - 0 ID=cds-PDP50439.1;Parent=gene-CLI77_00135;Dbxref=NCBI_GP:PDP50439.1;Name=PDP50439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI77_00135;product=hypothetical protein;protein_id=PDP50439.1;transl_table=11 NSLS01000001.1 Genbank gene 31662 32552 . - . ID=gene-CLI77_00140;Name=CLI77_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00140 NSLS01000001.1 Protein Homology CDS 31662 32552 . - 0 ID=cds-PDP50440.1;Parent=gene-CLI77_00140;Dbxref=NCBI_GP:PDP50440.1;Name=PDP50440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874157.1;locus_tag=CLI77_00140;product=glycosyl transferase family 2;protein_id=PDP50440.1;transl_table=11 NSLS01000001.1 Genbank gene 32568 33692 . - . ID=gene-CLI77_00145;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CLI77_00145 NSLS01000001.1 Protein Homology CDS 32568 33692 . - 0 ID=cds-PDP50441.1;Parent=gene-CLI77_00145;Dbxref=NCBI_GP:PDP50441.1;Name=PDP50441.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965810.1;locus_tag=CLI77_00145;product=DNA-protecting protein DprA;protein_id=PDP50441.1;transl_table=11 NSLS01000001.1 Genbank gene 33685 37389 . - . ID=gene-CLI77_00150;Name=CLI77_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00150 NSLS01000001.1 Protein Homology CDS 33685 37389 . - 0 ID=cds-PDP50442.1;Parent=gene-CLI77_00150;Dbxref=NCBI_GP:PDP50442.1;Name=PDP50442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458443.1;locus_tag=CLI77_00150;product=phosphoribosylformylglycinamidine synthase;protein_id=PDP50442.1;transl_table=11 NSLS01000001.1 Genbank gene 38087 38305 . + . ID=gene-CLI77_00155;Name=CLI77_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00155 NSLS01000001.1 Protein Homology CDS 38087 38305 . + 0 ID=cds-PDP50647.1;Parent=gene-CLI77_00155;Dbxref=NCBI_GP:PDP50647.1;Name=PDP50647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816225.1;locus_tag=CLI77_00155;product=hypothetical protein;protein_id=PDP50647.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 38565 38831 . - . ID=gene-CLI77_00160;Name=CLI77_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_00160;pseudo=true NSLS01000001.1 Protein Homology CDS 38565 38831 . - 0 ID=cds-CLI77_00160;Parent=gene-CLI77_00160;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_00160;product=IS982 family transposase;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 39005 40297 . + . ID=gene-CLI77_00165;Name=CLI77_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00165 NSLS01000001.1 Protein Homology CDS 39005 40297 . + 0 ID=cds-PDP50443.1;Parent=gene-CLI77_00165;Dbxref=NCBI_GP:PDP50443.1;Name=PDP50443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458438.1;locus_tag=CLI77_00165;product=hypothetical protein;protein_id=PDP50443.1;transl_table=11 NSLS01000001.1 Genbank gene 40347 40592 . - . ID=gene-CLI77_00170;Name=CLI77_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00170 NSLS01000001.1 GeneMarkS+ CDS 40347 40592 . - 0 ID=cds-PDP50444.1;Parent=gene-CLI77_00170;Dbxref=NCBI_GP:PDP50444.1;Name=PDP50444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_00170;product=hypothetical protein;protein_id=PDP50444.1;transl_table=11 NSLS01000001.1 Genbank gene 40654 41076 . + . ID=gene-CLI77_00175;Name=CLI77_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00175 NSLS01000001.1 Protein Homology CDS 40654 41076 . + 0 ID=cds-PDP50445.1;Parent=gene-CLI77_00175;Dbxref=NCBI_GP:PDP50445.1;Name=PDP50445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584786.1;locus_tag=CLI77_00175;product=Fis family transcriptional regulator;protein_id=PDP50445.1;transl_table=11 NSLS01000001.1 Genbank gene 41086 41958 . + . ID=gene-CLI77_00180;Name=CLI77_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00180 NSLS01000001.1 Protein Homology CDS 41086 41958 . + 0 ID=cds-PDP50446.1;Parent=gene-CLI77_00180;Dbxref=NCBI_GP:PDP50446.1;Name=PDP50446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964241.1;locus_tag=CLI77_00180;product=ferredoxin;protein_id=PDP50446.1;transl_table=11 NSLS01000001.1 Genbank gene 41994 43325 . + . ID=gene-CLI77_00185;Name=CLI77_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00185 NSLS01000001.1 Protein Homology CDS 41994 43325 . + 0 ID=cds-PDP50447.1;Parent=gene-CLI77_00185;Dbxref=NCBI_GP:PDP50447.1;Name=PDP50447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584788.1;locus_tag=CLI77_00185;product=electron transport complex subunit RsxC;protein_id=PDP50447.1;transl_table=11 NSLS01000001.1 Genbank gene 43341 44324 . + . ID=gene-CLI77_00190;Name=CLI77_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00190 NSLS01000001.1 Protein Homology CDS 43341 44324 . + 0 ID=cds-PDP50448.1;Parent=gene-CLI77_00190;Dbxref=NCBI_GP:PDP50448.1;Name=PDP50448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964239.1;locus_tag=CLI77_00190;product=Na+-transporting NADH:ubiquinone oxidoreductase subunit D;protein_id=PDP50448.1;transl_table=11 NSLS01000001.1 Genbank gene 44321 44998 . + . ID=gene-CLI77_00195;Name=CLI77_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00195 NSLS01000001.1 Protein Homology CDS 44321 44998 . + 0 ID=cds-PDP50449.1;Parent=gene-CLI77_00195;Dbxref=NCBI_GP:PDP50449.1;Name=PDP50449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874238.1;locus_tag=CLI77_00195;product=electron transporter RnfG;protein_id=PDP50449.1;transl_table=11 NSLS01000001.1 Genbank gene 44995 45585 . + . ID=gene-CLI77_00200;Name=CLI77_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00200 NSLS01000001.1 Protein Homology CDS 44995 45585 . + 0 ID=cds-PDP50450.1;Parent=gene-CLI77_00200;Dbxref=NCBI_GP:PDP50450.1;Name=PDP50450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584791.1;locus_tag=CLI77_00200;product=electron transport complex subunit RsxE;protein_id=PDP50450.1;transl_table=11 NSLS01000001.1 Genbank gene 45610 46182 . + . ID=gene-CLI77_00205;Name=CLI77_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00205 NSLS01000001.1 Protein Homology CDS 45610 46182 . + 0 ID=cds-PDP50451.1;Parent=gene-CLI77_00205;Dbxref=NCBI_GP:PDP50451.1;Name=PDP50451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874209.1;locus_tag=CLI77_00205;product=electron transport complex protein RnfA;protein_id=PDP50451.1;transl_table=11 NSLS01000001.1 Genbank gene 46395 47408 . - . ID=gene-CLI77_00210;Name=CLI77_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00210 NSLS01000001.1 Protein Homology CDS 46395 47408 . - 0 ID=cds-PDP50452.1;Parent=gene-CLI77_00210;Dbxref=NCBI_GP:PDP50452.1;Name=PDP50452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964237.1;locus_tag=CLI77_00210;product=FAD:protein FMN transferase;protein_id=PDP50452.1;transl_table=11 NSLS01000001.1 Genbank gene 47405 47944 . - . ID=gene-CLI77_00215;Name=CLI77_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00215 NSLS01000001.1 Protein Homology CDS 47405 47944 . - 0 ID=cds-PDP50453.1;Parent=gene-CLI77_00215;Dbxref=NCBI_GP:PDP50453.1;Name=PDP50453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816138.1;locus_tag=CLI77_00215;product=nitroreductase;protein_id=PDP50453.1;transl_table=11 NSLS01000001.1 Genbank gene 47944 48897 . - . ID=gene-CLI77_00220;Name=CLI77_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00220 NSLS01000001.1 Protein Homology CDS 47944 48897 . - 0 ID=cds-PDP50454.1;Parent=gene-CLI77_00220;Dbxref=NCBI_GP:PDP50454.1;Name=PDP50454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874175.1;locus_tag=CLI77_00220;product=glycosyltransferase;protein_id=PDP50454.1;transl_table=11 NSLS01000001.1 Genbank gene 48894 49433 . - . ID=gene-CLI77_00225;Name=CLI77_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00225 NSLS01000001.1 Protein Homology CDS 48894 49433 . - 0 ID=cds-PDP50455.1;Parent=gene-CLI77_00225;Dbxref=NCBI_GP:PDP50455.1;Name=PDP50455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874183.1;locus_tag=CLI77_00225;product=DUF4199 domain-containing protein;protein_id=PDP50455.1;transl_table=11 NSLS01000001.1 Genbank gene 49792 50100 . + . ID=gene-CLI77_00230;Name=CLI77_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00230 NSLS01000001.1 Protein Homology CDS 49792 50100 . + 0 ID=cds-PDP50456.1;Parent=gene-CLI77_00230;Dbxref=NCBI_GP:PDP50456.1;Name=PDP50456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955975.1;locus_tag=CLI77_00230;product=hypothetical protein;protein_id=PDP50456.1;transl_table=11 NSLS01000001.1 Genbank gene 50161 50478 . + . ID=gene-CLI77_00235;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CLI77_00235 NSLS01000001.1 Protein Homology CDS 50161 50478 . + 0 ID=cds-PDP50457.1;Parent=gene-CLI77_00235;Dbxref=NCBI_GP:PDP50457.1;Name=PDP50457.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709329.1;locus_tag=CLI77_00235;product=50S ribosomal protein L21;protein_id=PDP50457.1;transl_table=11 NSLS01000001.1 Genbank gene 50506 50763 . + . ID=gene-CLI77_00240;Name=CLI77_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00240 NSLS01000001.1 Protein Homology CDS 50506 50763 . + 0 ID=cds-PDP50458.1;Parent=gene-CLI77_00240;Dbxref=NCBI_GP:PDP50458.1;Name=PDP50458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842455.1;locus_tag=CLI77_00240;product=50S ribosomal protein L27;protein_id=PDP50458.1;transl_table=11 NSLS01000001.1 Genbank gene 50864 52135 . + . ID=gene-CLI77_00245;Name=CLI77_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00245 NSLS01000001.1 Protein Homology CDS 50864 52135 . + 0 ID=cds-PDP50459.1;Parent=gene-CLI77_00245;Dbxref=NCBI_GP:PDP50459.1;Name=PDP50459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874225.1;locus_tag=CLI77_00245;product=serine--tRNA ligase;protein_id=PDP50459.1;transl_table=11 NSLS01000001.1 Genbank gene 52148 54808 . - . ID=gene-CLI77_00250;Name=CLI77_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00250 NSLS01000001.1 Protein Homology CDS 52148 54808 . - 0 ID=cds-PDP50460.1;Parent=gene-CLI77_00250;Dbxref=NCBI_GP:PDP50460.1;Name=PDP50460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816143.1;locus_tag=CLI77_00250;product=peptidase M49;protein_id=PDP50460.1;transl_table=11 NSLS01000001.1 Genbank gene 54805 55131 . - . ID=gene-CLI77_00255;Name=CLI77_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00255 NSLS01000001.1 Protein Homology CDS 54805 55131 . - 0 ID=cds-PDP50461.1;Parent=gene-CLI77_00255;Dbxref=NCBI_GP:PDP50461.1;Name=PDP50461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816245.1;locus_tag=CLI77_00255;product=hypothetical protein;protein_id=PDP50461.1;transl_table=11 NSLS01000001.1 Genbank gene 55419 55802 . + . ID=gene-CLI77_00260;Name=CLI77_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00260 NSLS01000001.1 Protein Homology CDS 55419 55802 . + 0 ID=cds-PDP50462.1;Parent=gene-CLI77_00260;Dbxref=NCBI_GP:PDP50462.1;Name=PDP50462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584804.1;locus_tag=CLI77_00260;product=DUF1573 domain-containing protein;protein_id=PDP50462.1;transl_table=11 NSLS01000001.1 Genbank gene 55834 56922 . + . ID=gene-CLI77_00265;Name=CLI77_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00265 NSLS01000001.1 Protein Homology CDS 55834 56922 . + 0 ID=cds-PDP50463.1;Parent=gene-CLI77_00265;Dbxref=NCBI_GP:PDP50463.1;Name=PDP50463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458429.1;locus_tag=CLI77_00265;product=DUF1573 domain-containing protein;protein_id=PDP50463.1;transl_table=11 NSLS01000001.1 Genbank gene 56998 58104 . + . ID=gene-CLI77_00270;Name=CLI77_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00270 NSLS01000001.1 Protein Homology CDS 56998 58104 . + 0 ID=cds-PDP50464.1;Parent=gene-CLI77_00270;Dbxref=NCBI_GP:PDP50464.1;Name=PDP50464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584806.1;locus_tag=CLI77_00270;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=PDP50464.1;transl_table=11 NSLS01000001.1 Genbank gene 58133 59311 . + . ID=gene-CLI77_00275;Name=CLI77_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00275 NSLS01000001.1 Protein Homology CDS 58133 59311 . + 0 ID=cds-PDP50465.1;Parent=gene-CLI77_00275;Dbxref=NCBI_GP:PDP50465.1;Name=PDP50465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584807.1;locus_tag=CLI77_00275;product=dicarboxylate/amino acid:cation symporter;protein_id=PDP50465.1;transl_table=11 NSLS01000001.1 Genbank gene 59434 59763 . - . ID=gene-CLI77_00280;Name=CLI77_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00280 NSLS01000001.1 Protein Homology CDS 59434 59763 . - 0 ID=cds-PDP50466.1;Parent=gene-CLI77_00280;Dbxref=NCBI_GP:PDP50466.1;Name=PDP50466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816145.1;locus_tag=CLI77_00280;product=cupin domain-containing protein;protein_id=PDP50466.1;transl_table=11 NSLS01000001.1 Genbank gene 59964 61457 . - . ID=gene-CLI77_00285;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CLI77_00285 NSLS01000001.1 Protein Homology CDS 59964 61457 . - 0 ID=cds-PDP50467.1;Parent=gene-CLI77_00285;Dbxref=NCBI_GP:PDP50467.1;Name=PDP50467.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964268.1;locus_tag=CLI77_00285;product=histidine ammonia-lyase;protein_id=PDP50467.1;transl_table=11 NSLS01000001.1 Genbank gene 61460 62089 . - . ID=gene-CLI77_00290;Name=CLI77_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00290 NSLS01000001.1 Protein Homology CDS 61460 62089 . - 0 ID=cds-PDP50468.1;Parent=gene-CLI77_00290;Dbxref=NCBI_GP:PDP50468.1;Name=PDP50468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584810.1;locus_tag=CLI77_00290;product=methenyltetrahydrofolate cyclohydrolase;protein_id=PDP50468.1;transl_table=11 NSLS01000001.1 Genbank gene 62114 63262 . - . ID=gene-CLI77_00295;Name=CLI77_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00295 NSLS01000001.1 Protein Homology CDS 62114 63262 . - 0 ID=cds-PDP50469.1;Parent=gene-CLI77_00295;Dbxref=NCBI_GP:PDP50469.1;Name=PDP50469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458425.1;locus_tag=CLI77_00295;product=porin;protein_id=PDP50469.1;transl_table=11 NSLS01000001.1 Genbank gene 63282 64436 . - . ID=gene-CLI77_00300;Name=CLI77_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00300 NSLS01000001.1 Protein Homology CDS 63282 64436 . - 0 ID=cds-PDP50470.1;Parent=gene-CLI77_00300;Dbxref=NCBI_GP:PDP50470.1;Name=PDP50470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584812.1;locus_tag=CLI77_00300;product=hypothetical protein;protein_id=PDP50470.1;transl_table=11 NSLS01000001.1 Genbank gene 64530 65801 . - . ID=gene-CLI77_00305;Name=CLI77_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00305 NSLS01000001.1 Protein Homology CDS 64530 65801 . - 0 ID=cds-PDP50471.1;Parent=gene-CLI77_00305;Dbxref=NCBI_GP:PDP50471.1;Name=PDP50471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458424.1;locus_tag=CLI77_00305;product=imidazolonepropionase;protein_id=PDP50471.1;transl_table=11 NSLS01000001.1 Genbank gene 65902 66804 . - . ID=gene-CLI77_00310;Name=ftcD;gbkey=Gene;gene=ftcD;gene_biotype=protein_coding;locus_tag=CLI77_00310 NSLS01000001.1 Protein Homology CDS 65902 66804 . - 0 ID=cds-PDP50472.1;Parent=gene-CLI77_00310;Dbxref=NCBI_GP:PDP50472.1;Name=PDP50472.1;gbkey=CDS;gene=ftcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874204.1;locus_tag=CLI77_00310;product=glutamate formimidoyltransferase;protein_id=PDP50472.1;transl_table=11 NSLS01000001.1 Genbank gene 66853 67368 . - . ID=gene-CLI77_00315;Name=CLI77_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00315 NSLS01000001.1 Protein Homology CDS 66853 67368 . - 0 ID=cds-PDP50473.1;Parent=gene-CLI77_00315;Dbxref=NCBI_GP:PDP50473.1;Name=PDP50473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964274.1;locus_tag=CLI77_00315;product=histidinol phosphate phosphatase;protein_id=PDP50473.1;transl_table=11 NSLS01000001.1 Genbank gene 68044 70020 . + . ID=gene-CLI77_00320;Name=CLI77_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00320 NSLS01000001.1 Protein Homology CDS 68044 70020 . + 0 ID=cds-PDP50474.1;Parent=gene-CLI77_00320;Dbxref=NCBI_GP:PDP50474.1;Name=PDP50474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874185.1;locus_tag=CLI77_00320;product=transcription termination factor Rho;protein_id=PDP50474.1;transl_table=11 NSLS01000001.1 Genbank gene 70248 71156 . + . ID=gene-CLI77_00325;Name=CLI77_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00325 NSLS01000001.1 Protein Homology CDS 70248 71156 . + 0 ID=cds-PDP50475.1;Parent=gene-CLI77_00325;Dbxref=NCBI_GP:PDP50475.1;Name=PDP50475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874161.1;locus_tag=CLI77_00325;product=EamA/RhaT family transporter;protein_id=PDP50475.1;transl_table=11 NSLS01000001.1 Genbank gene 71167 72126 . - . ID=gene-CLI77_00330;Name=CLI77_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00330 NSLS01000001.1 Protein Homology CDS 71167 72126 . - 0 ID=cds-PDP50476.1;Parent=gene-CLI77_00330;Dbxref=NCBI_GP:PDP50476.1;Name=PDP50476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816153.1;locus_tag=CLI77_00330;product=glycosyltransferase;protein_id=PDP50476.1;transl_table=11 NSLS01000001.1 Genbank gene 72179 73081 . - . ID=gene-CLI77_00335;Name=CLI77_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00335 NSLS01000001.1 Protein Homology CDS 72179 73081 . - 0 ID=cds-PDP50477.1;Parent=gene-CLI77_00335;Dbxref=NCBI_GP:PDP50477.1;Name=PDP50477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584820.1;locus_tag=CLI77_00335;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP50477.1;transl_table=11 NSLS01000001.1 Genbank gene 73101 73670 . - . ID=gene-CLI77_00340;Name=CLI77_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00340 NSLS01000001.1 Protein Homology CDS 73101 73670 . - 0 ID=cds-PDP50478.1;Parent=gene-CLI77_00340;Dbxref=NCBI_GP:PDP50478.1;Name=PDP50478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584821.1;locus_tag=CLI77_00340;product=hypothetical protein;protein_id=PDP50478.1;transl_table=11 NSLS01000001.1 Genbank gene 73959 77318 . + . ID=gene-CLI77_00345;Name=CLI77_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00345 NSLS01000001.1 Protein Homology CDS 73959 77318 . + 0 ID=cds-PDP50479.1;Parent=gene-CLI77_00345;Dbxref=NCBI_GP:PDP50479.1;Name=PDP50479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584823.1;locus_tag=CLI77_00345;product=hypothetical protein;protein_id=PDP50479.1;transl_table=11 NSLS01000001.1 Genbank gene 77323 77868 . + . ID=gene-CLI77_00350;Name=CLI77_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00350 NSLS01000001.1 Protein Homology CDS 77323 77868 . + 0 ID=cds-PDP50480.1;Parent=gene-CLI77_00350;Dbxref=NCBI_GP:PDP50480.1;Name=PDP50480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955981.1;locus_tag=CLI77_00350;product=hypothetical protein;protein_id=PDP50480.1;transl_table=11 NSLS01000001.1 Genbank direct_repeat 78077 78575 . + . ID=id-NSLS01000001.1:78077..78575;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=78077..78112;rpt_unit_seq=gttggatctaccctctattcgaagggtacacacaac NSLS01000001.1 Genbank gene 79388 80587 . - . ID=gene-CLI77_00355;Name=megL;gbkey=Gene;gene=megL;gene_biotype=protein_coding;locus_tag=CLI77_00355 NSLS01000001.1 Protein Homology CDS 79388 80587 . - 0 ID=cds-PDP50481.1;Parent=gene-CLI77_00355;Dbxref=NCBI_GP:PDP50481.1;Name=PDP50481.1;gbkey=CDS;gene=megL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816157.1;locus_tag=CLI77_00355;product=methionine gamma-lyase;protein_id=PDP50481.1;transl_table=11 NSLS01000001.1 Genbank gene 80750 82219 . - . ID=gene-CLI77_00360;Name=CLI77_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00360 NSLS01000001.1 Protein Homology CDS 80750 82219 . - 0 ID=cds-PDP50482.1;Parent=gene-CLI77_00360;Dbxref=NCBI_GP:PDP50482.1;Name=PDP50482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964285.1;locus_tag=CLI77_00360;product=calcineurin;protein_id=PDP50482.1;transl_table=11 NSLS01000001.1 Genbank gene 82222 82815 . - . ID=gene-CLI77_00365;Name=CLI77_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00365 NSLS01000001.1 Protein Homology CDS 82222 82815 . - 0 ID=cds-PDP50483.1;Parent=gene-CLI77_00365;Dbxref=NCBI_GP:PDP50483.1;Name=PDP50483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964286.1;locus_tag=CLI77_00365;product=hypothetical protein;protein_id=PDP50483.1;transl_table=11 NSLS01000001.1 Genbank gene 82916 83521 . + . ID=gene-CLI77_00370;Name=CLI77_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00370 NSLS01000001.1 Protein Homology CDS 82916 83521 . + 0 ID=cds-PDP50484.1;Parent=gene-CLI77_00370;Dbxref=NCBI_GP:PDP50484.1;Name=PDP50484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964287.1;locus_tag=CLI77_00370;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=PDP50484.1;transl_table=11 NSLS01000001.1 Genbank gene 83531 84559 . + . ID=gene-CLI77_00375;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CLI77_00375 NSLS01000001.1 Protein Homology CDS 83531 84559 . + 0 ID=cds-PDP50485.1;Parent=gene-CLI77_00375;Dbxref=NCBI_GP:PDP50485.1;Name=PDP50485.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584830.1;locus_tag=CLI77_00375;product=UDP-glucose 4-epimerase GalE;protein_id=PDP50485.1;transl_table=11 NSLS01000001.1 Genbank gene 84602 86698 . + . ID=gene-CLI77_00380;Name=CLI77_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00380 NSLS01000001.1 Protein Homology CDS 84602 86698 . + 0 ID=cds-PDP50486.1;Parent=gene-CLI77_00380;Dbxref=NCBI_GP:PDP50486.1;Name=PDP50486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816160.1;locus_tag=CLI77_00380;product=ATP-dependent DNA helicase RecG;protein_id=PDP50486.1;transl_table=11 NSLS01000001.1 Genbank gene 86698 87468 . + . ID=gene-CLI77_00385;Name=CLI77_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00385 NSLS01000001.1 Protein Homology CDS 86698 87468 . + 0 ID=cds-PDP50487.1;Parent=gene-CLI77_00385;Dbxref=NCBI_GP:PDP50487.1;Name=PDP50487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873802.1;locus_tag=CLI77_00385;product=HAD family hydrolase;protein_id=PDP50487.1;transl_table=11 NSLS01000001.1 Genbank gene 87563 89020 . - . ID=gene-CLI77_00390;Name=CLI77_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00390 NSLS01000001.1 Protein Homology CDS 87563 89020 . - 0 ID=cds-PDP50488.1;Parent=gene-CLI77_00390;Dbxref=NCBI_GP:PDP50488.1;Name=PDP50488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816162.1;locus_tag=CLI77_00390;product=internalin;protein_id=PDP50488.1;transl_table=11 NSLS01000001.1 Genbank gene 89034 89294 . + . ID=gene-CLI77_00395;Name=CLI77_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00395 NSLS01000001.1 Protein Homology CDS 89034 89294 . + 0 ID=cds-PDP50489.1;Parent=gene-CLI77_00395;Dbxref=NCBI_GP:PDP50489.1;Name=PDP50489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955985.1;locus_tag=CLI77_00395;product=hypothetical protein;protein_id=PDP50489.1;transl_table=11 NSLS01000001.1 Genbank gene 89585 91027 . + . ID=gene-CLI77_00400;Name=CLI77_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00400 NSLS01000001.1 Protein Homology CDS 89585 91027 . + 0 ID=cds-PDP50648.1;Parent=gene-CLI77_00400;Dbxref=NCBI_GP:PDP50648.1;Name=PDP50648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584834.1;locus_tag=CLI77_00400;product=sialidase;protein_id=PDP50648.1;transl_table=11 NSLS01000001.1 Genbank gene 91092 91277 . - . ID=gene-CLI77_00405;Name=CLI77_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00405 NSLS01000001.1 Protein Homology CDS 91092 91277 . - 0 ID=cds-PDP50490.1;Parent=gene-CLI77_00405;Dbxref=NCBI_GP:PDP50490.1;Name=PDP50490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584835.1;locus_tag=CLI77_00405;product=hypothetical protein;protein_id=PDP50490.1;transl_table=11 NSLS01000001.1 Genbank gene 91673 91921 . + . ID=gene-CLI77_00410;Name=CLI77_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00410 NSLS01000001.1 Protein Homology CDS 91673 91921 . + 0 ID=cds-PDP50491.1;Parent=gene-CLI77_00410;Dbxref=NCBI_GP:PDP50491.1;Name=PDP50491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585569.1;locus_tag=CLI77_00410;product=hypothetical protein;protein_id=PDP50491.1;transl_table=11 NSLS01000001.1 Genbank gene 91903 92886 . + . ID=gene-CLI77_00415;Name=CLI77_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00415 NSLS01000001.1 Protein Homology CDS 91903 92886 . + 0 ID=cds-PDP50492.1;Parent=gene-CLI77_00415;Dbxref=NCBI_GP:PDP50492.1;Name=PDP50492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458401.1;locus_tag=CLI77_00415;product=hypothetical protein;protein_id=PDP50492.1;transl_table=11 NSLS01000001.1 Genbank gene 92915 93652 . + . ID=gene-CLI77_00420;Name=CLI77_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00420 NSLS01000001.1 Protein Homology CDS 92915 93652 . + 0 ID=cds-PDP50493.1;Parent=gene-CLI77_00420;Dbxref=NCBI_GP:PDP50493.1;Name=PDP50493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816166.1;locus_tag=CLI77_00420;product=SIMPL domain-containing protein;protein_id=PDP50493.1;transl_table=11 NSLS01000001.1 Genbank gene 93699 94613 . + . ID=gene-CLI77_00425;Name=CLI77_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00425 NSLS01000001.1 Protein Homology CDS 93699 94613 . + 0 ID=cds-PDP50494.1;Parent=gene-CLI77_00425;Dbxref=NCBI_GP:PDP50494.1;Name=PDP50494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964295.1;locus_tag=CLI77_00425;product=aspartate carbamoyltransferase;protein_id=PDP50494.1;transl_table=11 NSLS01000001.1 Genbank gene 94626 95081 . + . ID=gene-CLI77_00430;Name=CLI77_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00430 NSLS01000001.1 Protein Homology CDS 94626 95081 . + 0 ID=cds-PDP50495.1;Parent=gene-CLI77_00430;Dbxref=NCBI_GP:PDP50495.1;Name=PDP50495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964296.1;locus_tag=CLI77_00430;product=aspartate carbamoyltransferase regulatory subunit;protein_id=PDP50495.1;transl_table=11 NSLS01000001.1 Genbank gene 95110 95697 . + . ID=gene-CLI77_00435;Name=CLI77_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00435 NSLS01000001.1 Protein Homology CDS 95110 95697 . + 0 ID=cds-PDP50496.1;Parent=gene-CLI77_00435;Dbxref=NCBI_GP:PDP50496.1;Name=PDP50496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458398.1;locus_tag=CLI77_00435;product=flavin reductase family protein;protein_id=PDP50496.1;transl_table=11 NSLS01000001.1 Genbank gene 95735 96331 . + . ID=gene-CLI77_00440;Name=CLI77_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00440 NSLS01000001.1 Protein Homology CDS 95735 96331 . + 0 ID=cds-PDP50497.1;Parent=gene-CLI77_00440;Dbxref=NCBI_GP:PDP50497.1;Name=PDP50497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584889.1;locus_tag=CLI77_00440;product=LemA family protein;protein_id=PDP50497.1;transl_table=11 NSLS01000001.1 Genbank gene 96392 97660 . + . ID=gene-CLI77_00445;Name=CLI77_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00445 NSLS01000001.1 Protein Homology CDS 96392 97660 . + 0 ID=cds-PDP50649.1;Parent=gene-CLI77_00445;Dbxref=NCBI_GP:PDP50649.1;Name=PDP50649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458397.1;locus_tag=CLI77_00445;product=hypothetical protein;protein_id=PDP50649.1;transl_table=11 NSLS01000001.1 Genbank gene 97668 99728 . + . ID=gene-CLI77_00450;Name=CLI77_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00450 NSLS01000001.1 Protein Homology CDS 97668 99728 . + 0 ID=cds-PDP50498.1;Parent=gene-CLI77_00450;Dbxref=NCBI_GP:PDP50498.1;Name=PDP50498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964300.1;locus_tag=CLI77_00450;product=hypothetical protein;protein_id=PDP50498.1;transl_table=11 NSLS01000001.1 Genbank gene 99729 100556 . + . ID=gene-CLI77_00455;Name=CLI77_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00455 NSLS01000001.1 Protein Homology CDS 99729 100556 . + 0 ID=cds-PDP50499.1;Parent=gene-CLI77_00455;Dbxref=NCBI_GP:PDP50499.1;Name=PDP50499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458395.1;locus_tag=CLI77_00455;product=glutamine ABC transporter;protein_id=PDP50499.1;transl_table=11 NSLS01000001.1 Genbank gene 100619 101824 . - . ID=gene-CLI77_00460;Name=CLI77_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00460 NSLS01000001.1 Protein Homology CDS 100619 101824 . - 0 ID=cds-PDP50500.1;Parent=gene-CLI77_00460;Dbxref=NCBI_GP:PDP50500.1;Name=PDP50500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816172.1;locus_tag=CLI77_00460;product=RlmI/RlmK family 23S rRNA methyltransferase;protein_id=PDP50500.1;transl_table=11 NSLS01000001.1 Genbank gene 101821 102423 . - . ID=gene-CLI77_00465;Name=CLI77_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00465 NSLS01000001.1 Protein Homology CDS 101821 102423 . - 0 ID=cds-PDP50501.1;Parent=gene-CLI77_00465;Dbxref=NCBI_GP:PDP50501.1;Name=PDP50501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964303.1;locus_tag=CLI77_00465;product=3'-5' exonuclease domain-containing protein 2;protein_id=PDP50501.1;transl_table=11 NSLS01000001.1 Genbank gene 102464 103024 . - . ID=gene-CLI77_00470;Name=CLI77_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00470 NSLS01000001.1 Protein Homology CDS 102464 103024 . - 0 ID=cds-PDP50502.1;Parent=gene-CLI77_00470;Dbxref=NCBI_GP:PDP50502.1;Name=PDP50502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458393.1;locus_tag=CLI77_00470;product=DUF5063 domain-containing protein;protein_id=PDP50502.1;transl_table=11 NSLS01000001.1 Genbank gene 103503 105437 . + . ID=gene-CLI77_00475;Name=CLI77_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00475 NSLS01000001.1 Protein Homology CDS 103503 105437 . + 0 ID=cds-PDP50503.1;Parent=gene-CLI77_00475;Dbxref=NCBI_GP:PDP50503.1;Name=PDP50503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873796.1;locus_tag=CLI77_00475;product=type IIA DNA topoisomerase subunit B;protein_id=PDP50503.1;transl_table=11 NSLS01000001.1 Genbank gene 105468 105929 . + . ID=gene-CLI77_00480;Name=CLI77_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00480 NSLS01000001.1 Protein Homology CDS 105468 105929 . + 0 ID=cds-PDP50504.1;Parent=gene-CLI77_00480;Dbxref=NCBI_GP:PDP50504.1;Name=PDP50504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873821.1;locus_tag=CLI77_00480;product=pantetheine-phosphate adenylyltransferase;protein_id=PDP50504.1;transl_table=11 NSLS01000001.1 Genbank gene 106879 107547 . + . ID=gene-CLI77_00485;Name=CLI77_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00485 NSLS01000001.1 Protein Homology CDS 106879 107547 . + 0 ID=cds-PDP50505.1;Parent=gene-CLI77_00485;Dbxref=NCBI_GP:PDP50505.1;Name=PDP50505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816175.1;locus_tag=CLI77_00485;product=hypothetical protein;protein_id=PDP50505.1;transl_table=11 NSLS01000001.1 Genbank gene 108108 108563 . + . ID=gene-CLI77_00490;Name=CLI77_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00490 NSLS01000001.1 Protein Homology CDS 108108 108563 . + 0 ID=cds-PDP50506.1;Parent=gene-CLI77_00490;Dbxref=NCBI_GP:PDP50506.1;Name=PDP50506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812786.1;locus_tag=CLI77_00490;product=50S ribosomal protein L13;protein_id=PDP50506.1;transl_table=11 NSLS01000001.1 Genbank gene 108573 108959 . + . ID=gene-CLI77_00495;Name=CLI77_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00495 NSLS01000001.1 Protein Homology CDS 108573 108959 . + 0 ID=cds-PDP50507.1;Parent=gene-CLI77_00495;Dbxref=NCBI_GP:PDP50507.1;Name=PDP50507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360966.1;locus_tag=CLI77_00495;product=30S ribosomal protein S9;protein_id=PDP50507.1;transl_table=11 NSLS01000001.1 Genbank gene 109094 109939 . + . ID=gene-CLI77_00500;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CLI77_00500 NSLS01000001.1 Protein Homology CDS 109094 109939 . + 0 ID=cds-PDP50508.1;Parent=gene-CLI77_00500;Dbxref=NCBI_GP:PDP50508.1;Name=PDP50508.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584904.1;locus_tag=CLI77_00500;product=30S ribosomal protein S2;protein_id=PDP50508.1;transl_table=11 NSLS01000001.1 Genbank gene 110080 110904 . + . ID=gene-CLI77_00505;Name=CLI77_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00505 NSLS01000001.1 Protein Homology CDS 110080 110904 . + 0 ID=cds-PDP50509.1;Parent=gene-CLI77_00505;Dbxref=NCBI_GP:PDP50509.1;Name=PDP50509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584905.1;locus_tag=CLI77_00505;product=elongation factor Ts;protein_id=PDP50509.1;transl_table=11 NSLS01000001.1 Genbank gene 111278 113314 . + . ID=gene-CLI77_00510;Name=CLI77_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00510 NSLS01000001.1 Protein Homology CDS 111278 113314 . + 0 ID=cds-PDP50510.1;Parent=gene-CLI77_00510;Dbxref=NCBI_GP:PDP50510.1;Name=PDP50510.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816178.1;locus_tag=CLI77_00510;product=excinuclease ABC subunit B;protein_id=PDP50510.1;transl_table=11 NSLS01000001.1 Genbank gene 113311 114831 . - . ID=gene-CLI77_00515;Name=CLI77_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00515 NSLS01000001.1 Protein Homology CDS 113311 114831 . - 0 ID=cds-PDP50511.1;Parent=gene-CLI77_00515;Dbxref=NCBI_GP:PDP50511.1;Name=PDP50511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458388.1;locus_tag=CLI77_00515;product=potassium/proton antiporter;protein_id=PDP50511.1;transl_table=11 NSLS01000001.1 Genbank gene 115308 116627 . + . ID=gene-CLI77_00520;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CLI77_00520 NSLS01000001.1 Protein Homology CDS 115308 116627 . + 0 ID=cds-PDP50512.1;Parent=gene-CLI77_00520;Dbxref=NCBI_GP:PDP50512.1;Name=PDP50512.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816181.1;locus_tag=CLI77_00520;product=RIP metalloprotease RseP;protein_id=PDP50512.1;transl_table=11 NSLS01000001.1 Genbank gene 116637 119159 . + . ID=gene-CLI77_00525;Name=CLI77_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00525 NSLS01000001.1 Protein Homology CDS 116637 119159 . + 0 ID=cds-PDP50513.1;Parent=gene-CLI77_00525;Dbxref=NCBI_GP:PDP50513.1;Name=PDP50513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873834.1;locus_tag=CLI77_00525;product=endonuclease MutS2;protein_id=PDP50513.1;transl_table=11 NSLS01000001.1 Genbank gene 119321 119512 . + . ID=gene-CLI77_00530;Name=CLI77_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00530 NSLS01000001.1 Protein Homology CDS 119321 119512 . + 0 ID=cds-PDP50514.1;Parent=gene-CLI77_00530;Dbxref=NCBI_GP:PDP50514.1;Name=PDP50514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964318.1;locus_tag=CLI77_00530;product=30S ribosomal protein S21;protein_id=PDP50514.1;transl_table=11 NSLS01000001.1 Genbank gene 119589 120794 . + . ID=gene-CLI77_00535;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CLI77_00535 NSLS01000001.1 Protein Homology CDS 119589 120794 . + 0 ID=cds-PDP50515.1;Parent=gene-CLI77_00535;Dbxref=NCBI_GP:PDP50515.1;Name=PDP50515.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816183.1;locus_tag=CLI77_00535;product=ribosomal subunit interface protein;protein_id=PDP50515.1;transl_table=11 NSLS01000001.1 Genbank gene 120934 121019 . + . ID=gene-CLI77_00540;Name=CLI77_00540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_00540 NSLS01000001.1 tRNAscan-SE tRNA 120934 121019 . + . ID=rna-CLI77_00540;Parent=gene-CLI77_00540;anticodon=(pos:120968..120970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00540;product=tRNA-Tyr NSLS01000001.1 tRNAscan-SE exon 120934 121019 . + . ID=exon-CLI77_00540-1;Parent=rna-CLI77_00540;anticodon=(pos:120968..120970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00540;product=tRNA-Tyr NSLS01000001.1 Genbank gene 121049 121120 . + . ID=gene-CLI77_00545;Name=CLI77_00545;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_00545 NSLS01000001.1 tRNAscan-SE tRNA 121049 121120 . + . ID=rna-CLI77_00545;Parent=gene-CLI77_00545;anticodon=(pos:121081..121083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00545;product=tRNA-Thr NSLS01000001.1 tRNAscan-SE exon 121049 121120 . + . ID=exon-CLI77_00545-1;Parent=rna-CLI77_00545;anticodon=(pos:121081..121083);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00545;product=tRNA-Thr NSLS01000001.1 Genbank gene 121188 122375 . + . ID=gene-CLI77_00550;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CLI77_00550 NSLS01000001.1 Protein Homology CDS 121188 122375 . + 0 ID=cds-PDP50516.1;Parent=gene-CLI77_00550;Dbxref=NCBI_GP:PDP50516.1;Name=PDP50516.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558087.1;locus_tag=CLI77_00550;product=elongation factor Tu;protein_id=PDP50516.1;transl_table=11 NSLS01000001.1 Genbank gene 122446 122521 . + . ID=gene-CLI77_00555;Name=CLI77_00555;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_00555 NSLS01000001.1 tRNAscan-SE tRNA 122446 122521 . + . ID=rna-CLI77_00555;Parent=gene-CLI77_00555;anticodon=(pos:122479..122481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00555;product=tRNA-Trp NSLS01000001.1 tRNAscan-SE exon 122446 122521 . + . ID=exon-CLI77_00555-1;Parent=rna-CLI77_00555;anticodon=(pos:122479..122481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_00555;product=tRNA-Trp NSLS01000001.1 Genbank gene 122534 122737 . + . ID=gene-CLI77_00560;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CLI77_00560 NSLS01000001.1 Protein Homology CDS 122534 122737 . + 0 ID=cds-PDP50517.1;Parent=gene-CLI77_00560;Dbxref=NCBI_GP:PDP50517.1;Name=PDP50517.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584915.1;locus_tag=CLI77_00560;product=preprotein translocase subunit SecE;protein_id=PDP50517.1;transl_table=11 NSLS01000001.1 Genbank gene 122759 123298 . + . ID=gene-CLI77_00565;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CLI77_00565 NSLS01000001.1 Protein Homology CDS 122759 123298 . + 0 ID=cds-PDP50518.1;Parent=gene-CLI77_00565;Dbxref=NCBI_GP:PDP50518.1;Name=PDP50518.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964321.1;locus_tag=CLI77_00565;product=transcription termination/antitermination factor NusG;protein_id=PDP50518.1;transl_table=11 NSLS01000001.1 Genbank gene 123367 123804 . + . ID=gene-CLI77_00570;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CLI77_00570 NSLS01000001.1 Protein Homology CDS 123367 123804 . + 0 ID=cds-PDP50519.1;Parent=gene-CLI77_00570;Dbxref=NCBI_GP:PDP50519.1;Name=PDP50519.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841944.1;locus_tag=CLI77_00570;product=50S ribosomal protein L11;protein_id=PDP50519.1;transl_table=11 NSLS01000001.1 Genbank gene 123825 124523 . + . ID=gene-CLI77_00575;Name=CLI77_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00575 NSLS01000001.1 Protein Homology CDS 123825 124523 . + 0 ID=cds-PDP50520.1;Parent=gene-CLI77_00575;Dbxref=NCBI_GP:PDP50520.1;Name=PDP50520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854218.1;locus_tag=CLI77_00575;product=50S ribosomal protein L1;protein_id=PDP50520.1;transl_table=11 NSLS01000001.1 Genbank gene 124539 125063 . + . ID=gene-CLI77_00580;Name=CLI77_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00580 NSLS01000001.1 Protein Homology CDS 124539 125063 . + 0 ID=cds-PDP50521.1;Parent=gene-CLI77_00580;Dbxref=NCBI_GP:PDP50521.1;Name=PDP50521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956000.1;locus_tag=CLI77_00580;product=50S ribosomal protein L10;protein_id=PDP50521.1;transl_table=11 NSLS01000001.1 Genbank gene 125105 125482 . + . ID=gene-CLI77_00585;Name=CLI77_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00585 NSLS01000001.1 Protein Homology CDS 125105 125482 . + 0 ID=cds-PDP50522.1;Parent=gene-CLI77_00585;Dbxref=NCBI_GP:PDP50522.1;Name=PDP50522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359876.1;locus_tag=CLI77_00585;product=50S ribosomal protein L7/L12;protein_id=PDP50522.1;transl_table=11 NSLS01000001.1 Genbank gene 125594 129403 . + . ID=gene-CLI77_00590;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CLI77_00590 NSLS01000001.1 Protein Homology CDS 125594 129403 . + 0 ID=cds-PDP50523.1;Parent=gene-CLI77_00590;Dbxref=NCBI_GP:PDP50523.1;Name=PDP50523.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101469.1;locus_tag=CLI77_00590;product=DNA-directed RNA polymerase subunit beta;protein_id=PDP50523.1;transl_table=11 NSLS01000001.1 Genbank gene 129469 133770 . + . ID=gene-CLI77_00595;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CLI77_00595 NSLS01000001.1 Protein Homology CDS 129469 133770 . + 0 ID=cds-PDP50524.1;Parent=gene-CLI77_00595;Dbxref=NCBI_GP:PDP50524.1;Name=PDP50524.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964326.1;locus_tag=CLI77_00595;product=DNA-directed RNA polymerase subunit beta';protein_id=PDP50524.1;transl_table=11 NSLS01000001.1 Genbank gene 134058 134756 . + . ID=gene-CLI77_00600;Name=CLI77_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00600 NSLS01000001.1 Protein Homology CDS 134058 134756 . + 0 ID=cds-PDP50525.1;Parent=gene-CLI77_00600;Dbxref=NCBI_GP:PDP50525.1;Name=PDP50525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873831.1;locus_tag=CLI77_00600;product=Crp/Fnr family transcriptional regulator;protein_id=PDP50525.1;transl_table=11 NSLS01000001.1 Genbank gene 134804 135094 . - . ID=gene-CLI77_00605;Name=CLI77_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00605 NSLS01000001.1 Protein Homology CDS 134804 135094 . - 0 ID=cds-PDP50526.1;Parent=gene-CLI77_00605;Dbxref=NCBI_GP:PDP50526.1;Name=PDP50526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584925.1;locus_tag=CLI77_00605;product=hypothetical protein;protein_id=PDP50526.1;transl_table=11 NSLS01000001.1 Genbank gene 135108 136202 . - . ID=gene-CLI77_00610;Name=CLI77_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00610 NSLS01000001.1 Protein Homology CDS 135108 136202 . - 0 ID=cds-PDP50527.1;Parent=gene-CLI77_00610;Dbxref=NCBI_GP:PDP50527.1;Name=PDP50527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584926.1;locus_tag=CLI77_00610;product=DNA replication and repair protein RecF;protein_id=PDP50527.1;transl_table=11 NSLS01000001.1 Genbank gene 136199 136729 . - . ID=gene-CLI77_00615;Name=CLI77_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00615 NSLS01000001.1 Protein Homology CDS 136199 136729 . - 0 ID=cds-PDP50528.1;Parent=gene-CLI77_00615;Dbxref=NCBI_GP:PDP50528.1;Name=PDP50528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873801.1;locus_tag=CLI77_00615;product=gliding motility lipoprotein GldH;protein_id=PDP50528.1;transl_table=11 NSLS01000001.1 Genbank gene 136737 138149 . - . ID=gene-CLI77_00620;Name=CLI77_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00620 NSLS01000001.1 Protein Homology CDS 136737 138149 . - 0 ID=cds-PDP50529.1;Parent=gene-CLI77_00620;Dbxref=NCBI_GP:PDP50529.1;Name=PDP50529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816187.1;locus_tag=CLI77_00620;product=hypothetical protein;protein_id=PDP50529.1;transl_table=11 NSLS01000001.1 Genbank gene 138257 139798 . - . ID=gene-CLI77_00625;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CLI77_00625 NSLS01000001.1 Protein Homology CDS 138257 139798 . - 0 ID=cds-PDP50530.1;Parent=gene-CLI77_00625;Dbxref=NCBI_GP:PDP50530.1;Name=PDP50530.1;gbkey=CDS;gene=rny;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432587.1;locus_tag=CLI77_00625;product=ribonuclease Y;protein_id=PDP50530.1;transl_table=11 NSLS01000001.1 Genbank gene 139945 140253 . - . ID=gene-CLI77_00630;Name=CLI77_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00630 NSLS01000001.1 Protein Homology CDS 139945 140253 . - 0 ID=cds-PDP50531.1;Parent=gene-CLI77_00630;Dbxref=NCBI_GP:PDP50531.1;Name=PDP50531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584930.1;locus_tag=CLI77_00630;product=cell division protein ZapA;protein_id=PDP50531.1;transl_table=11 NSLS01000001.1 Genbank gene 140260 140556 . - . ID=gene-CLI77_00635;Name=CLI77_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00635 NSLS01000001.1 Protein Homology CDS 140260 140556 . - 0 ID=cds-PDP50532.1;Parent=gene-CLI77_00635;Dbxref=NCBI_GP:PDP50532.1;Name=PDP50532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964334.1;locus_tag=CLI77_00635;product=hypothetical protein;protein_id=PDP50532.1;transl_table=11 NSLS01000001.1 Genbank gene 141202 141384 . + . ID=gene-CLI77_00640;Name=CLI77_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00640 NSLS01000001.1 Protein Homology CDS 141202 141384 . + 0 ID=cds-PDP50533.1;Parent=gene-CLI77_00640;Dbxref=NCBI_GP:PDP50533.1;Name=PDP50533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584933.1;locus_tag=CLI77_00640;product=hypothetical protein;protein_id=PDP50533.1;transl_table=11 NSLS01000001.1 Genbank gene 141634 141948 . + . ID=gene-CLI77_00645;Name=CLI77_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00645 NSLS01000001.1 Protein Homology CDS 141634 141948 . + 0 ID=cds-PDP50534.1;Parent=gene-CLI77_00645;Dbxref=NCBI_GP:PDP50534.1;Name=PDP50534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873807.1;locus_tag=CLI77_00645;product=hypothetical protein;protein_id=PDP50534.1;transl_table=11 NSLS01000001.1 Genbank gene 141992 142813 . + . ID=gene-CLI77_00650;Name=CLI77_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00650 NSLS01000001.1 Protein Homology CDS 141992 142813 . + 0 ID=cds-PDP50535.1;Parent=gene-CLI77_00650;Dbxref=NCBI_GP:PDP50535.1;Name=PDP50535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359903.1;locus_tag=CLI77_00650;product=hypothetical protein;protein_id=PDP50535.1;transl_table=11 NSLS01000001.1 Genbank gene 143172 145949 . + . ID=gene-CLI77_00655;Name=CLI77_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00655 NSLS01000001.1 Protein Homology CDS 143172 145949 . + 0 ID=cds-PDP50536.1;Parent=gene-CLI77_00655;Dbxref=NCBI_GP:PDP50536.1;Name=PDP50536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956006.1;locus_tag=CLI77_00655;product=hemagglutinin;protein_id=PDP50536.1;transl_table=11 NSLS01000001.1 Genbank gene 146209 148065 . - . ID=gene-CLI77_00660;Name=CLI77_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00660 NSLS01000001.1 Protein Homology CDS 146209 148065 . - 0 ID=cds-PDP50537.1;Parent=gene-CLI77_00660;Dbxref=NCBI_GP:PDP50537.1;Name=PDP50537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458371.1;locus_tag=CLI77_00660;product=DNA mismatch repair protein MutL;protein_id=PDP50537.1;transl_table=11 NSLS01000001.1 Genbank gene 148062 148406 . - . ID=gene-CLI77_00665;Name=CLI77_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00665 NSLS01000001.1 Protein Homology CDS 148062 148406 . - 0 ID=cds-PDP50538.1;Parent=gene-CLI77_00665;Dbxref=NCBI_GP:PDP50538.1;Name=PDP50538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873824.1;locus_tag=CLI77_00665;product=hypothetical protein;protein_id=PDP50538.1;transl_table=11 NSLS01000001.1 Genbank gene 148397 150277 . - . ID=gene-CLI77_00670;Name=CLI77_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00670 NSLS01000001.1 Protein Homology CDS 148397 150277 . - 0 ID=cds-PDP50539.1;Parent=gene-CLI77_00670;Dbxref=NCBI_GP:PDP50539.1;Name=PDP50539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816194.1;locus_tag=CLI77_00670;product=OstA-like protein;protein_id=PDP50539.1;transl_table=11 NSLS01000001.1 Genbank gene 150339 151706 . - . ID=gene-CLI77_00675;Name=CLI77_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00675 NSLS01000001.1 Protein Homology CDS 150339 151706 . - 0 ID=cds-PDP50540.1;Parent=gene-CLI77_00675;Dbxref=NCBI_GP:PDP50540.1;Name=PDP50540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584940.1;locus_tag=CLI77_00675;product=peptidylprolyl isomerase;protein_id=PDP50540.1;transl_table=11 NSLS01000001.1 Genbank gene 151758 153935 . - . ID=gene-CLI77_00680;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CLI77_00680 NSLS01000001.1 Protein Homology CDS 151758 153935 . - 0 ID=cds-PDP50541.1;Parent=gene-CLI77_00680;Dbxref=NCBI_GP:PDP50541.1;Name=PDP50541.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966059.1;locus_tag=CLI77_00680;product=DNA helicase RecQ;protein_id=PDP50541.1;transl_table=11 NSLS01000001.1 Genbank gene 154014 155249 . - . ID=gene-CLI77_00685;Name=CLI77_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00685 NSLS01000001.1 Protein Homology CDS 154014 155249 . - 0 ID=cds-PDP50542.1;Parent=gene-CLI77_00685;Dbxref=NCBI_GP:PDP50542.1;Name=PDP50542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816197.1;locus_tag=CLI77_00685;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=PDP50542.1;transl_table=11 NSLS01000001.1 Genbank gene 155286 155954 . - . ID=gene-CLI77_00690;Name=CLI77_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00690 NSLS01000001.1 Protein Homology CDS 155286 155954 . - 0 ID=cds-PDP50650.1;Parent=gene-CLI77_00690;Dbxref=NCBI_GP:PDP50650.1;Name=PDP50650.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859577.1;locus_tag=CLI77_00690;product=ATP-dependent Clp protease proteolytic subunit;protein_id=PDP50650.1;transl_table=11 NSLS01000001.1 Genbank gene 156327 157187 . - . ID=gene-CLI77_00695;Name=CLI77_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00695 NSLS01000001.1 Protein Homology CDS 156327 157187 . - 0 ID=cds-PDP50543.1;Parent=gene-CLI77_00695;Dbxref=NCBI_GP:PDP50543.1;Name=PDP50543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584944.1;locus_tag=CLI77_00695;product=hypothetical protein;protein_id=PDP50543.1;transl_table=11 NSLS01000001.1 Genbank gene 157459 158316 . - . ID=gene-CLI77_00700;Name=CLI77_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00700 NSLS01000001.1 Protein Homology CDS 157459 158316 . - 0 ID=cds-PDP50544.1;Parent=gene-CLI77_00700;Dbxref=NCBI_GP:PDP50544.1;Name=PDP50544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584946.1;locus_tag=CLI77_00700;product=DUF2807 domain-containing protein;protein_id=PDP50544.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 158553 158925 . - . ID=gene-CLI77_00705;Name=CLI77_00705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_00705;pseudo=true NSLS01000001.1 Protein Homology CDS 158553 158925 . - 0 ID=cds-CLI77_00705;Parent=gene-CLI77_00705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873800.1;locus_tag=CLI77_00705;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 158822 159166 . + . ID=gene-CLI77_00710;Name=CLI77_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00710 NSLS01000001.1 Protein Homology CDS 158822 159166 . + 0 ID=cds-PDP50545.1;Parent=gene-CLI77_00710;Dbxref=NCBI_GP:PDP50545.1;Name=PDP50545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584948.1;locus_tag=CLI77_00710;product=hypothetical protein;protein_id=PDP50545.1;transl_table=11 NSLS01000001.1 Genbank gene 159147 159806 . + . ID=gene-CLI77_00715;Name=CLI77_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00715 NSLS01000001.1 Protein Homology CDS 159147 159806 . + 0 ID=cds-PDP50546.1;Parent=gene-CLI77_00715;Dbxref=NCBI_GP:PDP50546.1;Name=PDP50546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584949.1;locus_tag=CLI77_00715;product=hypothetical protein;protein_id=PDP50546.1;transl_table=11 NSLS01000001.1 Genbank gene 159842 160681 . - . ID=gene-CLI77_00720;Name=CLI77_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00720 NSLS01000001.1 Protein Homology CDS 159842 160681 . - 0 ID=cds-PDP50547.1;Parent=gene-CLI77_00720;Dbxref=NCBI_GP:PDP50547.1;Name=PDP50547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584950.1;locus_tag=CLI77_00720;product=XynC protein;protein_id=PDP50547.1;transl_table=11 NSLS01000001.1 Genbank gene 161014 164181 . - . ID=gene-CLI77_00725;Name=CLI77_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00725 NSLS01000001.1 Protein Homology CDS 161014 164181 . - 0 ID=cds-PDP50548.1;Parent=gene-CLI77_00725;Dbxref=NCBI_GP:PDP50548.1;Name=PDP50548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584952.1;locus_tag=CLI77_00725;product=ABC transporter permease;protein_id=PDP50548.1;transl_table=11 NSLS01000001.1 Genbank gene 164221 165594 . - . ID=gene-CLI77_00730;Name=CLI77_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00730 NSLS01000001.1 Protein Homology CDS 164221 165594 . - 0 ID=cds-PDP50549.1;Parent=gene-CLI77_00730;Dbxref=NCBI_GP:PDP50549.1;Name=PDP50549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816205.1;locus_tag=CLI77_00730;product=ABC transporter;protein_id=PDP50549.1;transl_table=11 NSLS01000001.1 Genbank gene 165689 168760 . - . ID=gene-CLI77_00735;Name=CLI77_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00735 NSLS01000001.1 Protein Homology CDS 165689 168760 . - 0 ID=cds-PDP50550.1;Parent=gene-CLI77_00735;Dbxref=NCBI_GP:PDP50550.1;Name=PDP50550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458356.1;locus_tag=CLI77_00735;product=cation transporter;protein_id=PDP50550.1;transl_table=11 NSLS01000001.1 Genbank gene 168795 169895 . - . ID=gene-CLI77_00740;Name=CLI77_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00740 NSLS01000001.1 Protein Homology CDS 168795 169895 . - 0 ID=cds-PDP50551.1;Parent=gene-CLI77_00740;Dbxref=NCBI_GP:PDP50551.1;Name=PDP50551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584955.1;locus_tag=CLI77_00740;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP50551.1;transl_table=11 NSLS01000001.1 Genbank gene 169914 170954 . - . ID=gene-CLI77_00745;Name=CLI77_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00745 NSLS01000001.1 Protein Homology CDS 169914 170954 . - 0 ID=cds-PDP50552.1;Parent=gene-CLI77_00745;Dbxref=NCBI_GP:PDP50552.1;Name=PDP50552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458354.1;locus_tag=CLI77_00745;product=hypothetical protein;protein_id=PDP50552.1;transl_table=11 NSLS01000001.1 Genbank gene 171108 172160 . - . ID=gene-CLI77_00750;Name=CLI77_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00750 NSLS01000001.1 Protein Homology CDS 171108 172160 . - 0 ID=cds-PDP50553.1;Parent=gene-CLI77_00750;Dbxref=NCBI_GP:PDP50553.1;Name=PDP50553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458353.1;locus_tag=CLI77_00750;product=hypothetical protein;protein_id=PDP50553.1;transl_table=11 NSLS01000001.1 Genbank gene 172249 173316 . - . ID=gene-CLI77_00755;Name=CLI77_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00755 NSLS01000001.1 Protein Homology CDS 172249 173316 . - 0 ID=cds-PDP50554.1;Parent=gene-CLI77_00755;Dbxref=NCBI_GP:PDP50554.1;Name=PDP50554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584958.1;locus_tag=CLI77_00755;product=hypothetical protein;protein_id=PDP50554.1;transl_table=11 NSLS01000001.1 Genbank gene 173619 174347 . + . ID=gene-CLI77_00760;Name=CLI77_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00760 NSLS01000001.1 Protein Homology CDS 173619 174347 . + 0 ID=cds-PDP50555.1;Parent=gene-CLI77_00760;Dbxref=NCBI_GP:PDP50555.1;Name=PDP50555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584959.1;locus_tag=CLI77_00760;product=carbonic anhydrase;protein_id=PDP50555.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 174664 174846 . - . ID=gene-CLI77_00765;Name=CLI77_00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_00765;pseudo=true NSLS01000001.1 Protein Homology CDS 174664 174846 . - 0 ID=cds-CLI77_00765;Parent=gene-CLI77_00765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584862.1;locus_tag=CLI77_00765;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 175340 177199 . + . ID=gene-CLI77_00770;Name=CLI77_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00770 NSLS01000001.1 Protein Homology CDS 175340 177199 . + 0 ID=cds-PDP50556.1;Parent=gene-CLI77_00770;Dbxref=NCBI_GP:PDP50556.1;Name=PDP50556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458348.1;locus_tag=CLI77_00770;product=MFS transporter;protein_id=PDP50556.1;transl_table=11 NSLS01000001.1 Genbank gene 177226 178233 . + . ID=gene-CLI77_00775;Name=CLI77_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00775 NSLS01000001.1 Protein Homology CDS 177226 178233 . + 0 ID=cds-PDP50557.1;Parent=gene-CLI77_00775;Dbxref=NCBI_GP:PDP50557.1;Name=PDP50557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584963.1;locus_tag=CLI77_00775;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=PDP50557.1;transl_table=11 NSLS01000001.1 Genbank gene 178463 179869 . - . ID=gene-CLI77_00780;Name=CLI77_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00780 NSLS01000001.1 Protein Homology CDS 178463 179869 . - 0 ID=cds-PDP50558.1;Parent=gene-CLI77_00780;Dbxref=NCBI_GP:PDP50558.1;Name=PDP50558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816215.1;locus_tag=CLI77_00780;product=SAM-dependent methyltransferase;protein_id=PDP50558.1;transl_table=11 NSLS01000001.1 Genbank gene 179873 180586 . - . ID=gene-CLI77_00785;Name=CLI77_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00785 NSLS01000001.1 Protein Homology CDS 179873 180586 . - 0 ID=cds-PDP50559.1;Parent=gene-CLI77_00785;Dbxref=NCBI_GP:PDP50559.1;Name=PDP50559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965935.1;locus_tag=CLI77_00785;product=SAM-dependent methyltransferase;protein_id=PDP50559.1;transl_table=11 NSLS01000001.1 Genbank gene 180623 181738 . - . ID=gene-CLI77_00790;Name=CLI77_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00790 NSLS01000001.1 Protein Homology CDS 180623 181738 . - 0 ID=cds-PDP50560.1;Parent=gene-CLI77_00790;Dbxref=NCBI_GP:PDP50560.1;Name=PDP50560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584966.1;locus_tag=CLI77_00790;product=hypothetical protein;protein_id=PDP50560.1;transl_table=11 NSLS01000001.1 Genbank gene 181897 182640 . - . ID=gene-CLI77_00795;Name=CLI77_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00795 NSLS01000001.1 Protein Homology CDS 181897 182640 . - 0 ID=cds-PDP50561.1;Parent=gene-CLI77_00795;Dbxref=NCBI_GP:PDP50561.1;Name=PDP50561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584968.1;locus_tag=CLI77_00795;product=capsular biosynthesis protein;protein_id=PDP50561.1;transl_table=11 NSLS01000001.1 Genbank gene 182650 185118 . - . ID=gene-CLI77_00800;Name=CLI77_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00800 NSLS01000001.1 Protein Homology CDS 182650 185118 . - 0 ID=cds-PDP50562.1;Parent=gene-CLI77_00800;Dbxref=NCBI_GP:PDP50562.1;Name=PDP50562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875156.1;locus_tag=CLI77_00800;product=capsule biosynthesis protein CapM;protein_id=PDP50562.1;transl_table=11 NSLS01000001.1 Genbank gene 185143 185946 . - . ID=gene-CLI77_00805;Name=CLI77_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00805 NSLS01000001.1 Protein Homology CDS 185143 185946 . - 0 ID=cds-PDP50563.1;Parent=gene-CLI77_00805;Dbxref=NCBI_GP:PDP50563.1;Name=PDP50563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584970.1;locus_tag=CLI77_00805;product=BexD/CtrA/VexA family polysaccharide export protein;protein_id=PDP50563.1;transl_table=11 NSLS01000001.1 Genbank gene 186123 187073 . + . ID=gene-CLI77_00810;Name=CLI77_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00810 NSLS01000001.1 Protein Homology CDS 186123 187073 . + 0 ID=cds-PDP50564.1;Parent=gene-CLI77_00810;Dbxref=NCBI_GP:PDP50564.1;Name=PDP50564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956019.1;locus_tag=CLI77_00810;product=GLPGLI family protein;protein_id=PDP50564.1;transl_table=11 NSLS01000001.1 Genbank gene 187153 187443 . + . ID=gene-CLI77_00815;Name=CLI77_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00815 NSLS01000001.1 GeneMarkS+ CDS 187153 187443 . + 0 ID=cds-PDP50565.1;Parent=gene-CLI77_00815;Dbxref=NCBI_GP:PDP50565.1;Name=PDP50565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_00815;product=hypothetical protein;protein_id=PDP50565.1;transl_table=11 NSLS01000001.1 Genbank gene 187507 188376 . + . ID=gene-CLI77_00820;Name=CLI77_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00820 NSLS01000001.1 Protein Homology CDS 187507 188376 . + 0 ID=cds-PDP50566.1;Parent=gene-CLI77_00820;Dbxref=NCBI_GP:PDP50566.1;Name=PDP50566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965831.1;locus_tag=CLI77_00820;product=GLPGLI family protein;protein_id=PDP50566.1;transl_table=11 NSLS01000001.1 Genbank gene 188380 191013 . + . ID=gene-CLI77_00825;Name=CLI77_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00825 NSLS01000001.1 Protein Homology CDS 188380 191013 . + 0 ID=cds-PDP50567.1;Parent=gene-CLI77_00825;Dbxref=NCBI_GP:PDP50567.1;Name=PDP50567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816224.1;locus_tag=CLI77_00825;product=hypothetical protein;protein_id=PDP50567.1;transl_table=11 NSLS01000001.1 Genbank gene 191125 191487 . + . ID=gene-CLI77_00830;Name=CLI77_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00830 NSLS01000001.1 Protein Homology CDS 191125 191487 . + 0 ID=cds-PDP50568.1;Parent=gene-CLI77_00830;Dbxref=NCBI_GP:PDP50568.1;Name=PDP50568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584975.1;locus_tag=CLI77_00830;product=hypothetical protein;protein_id=PDP50568.1;transl_table=11 NSLS01000001.1 Genbank gene 191694 192713 . + . ID=gene-CLI77_00835;Name=CLI77_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00835 NSLS01000001.1 Protein Homology CDS 191694 192713 . + 0 ID=cds-PDP50569.1;Parent=gene-CLI77_00835;Dbxref=NCBI_GP:PDP50569.1;Name=PDP50569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816226.1;locus_tag=CLI77_00835;product=hemagglutinin;protein_id=PDP50569.1;transl_table=11 NSLS01000001.1 Genbank gene 192902 194881 . + . ID=gene-CLI77_00840;Name=CLI77_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00840 NSLS01000001.1 Protein Homology CDS 192902 194881 . + 0 ID=cds-PDP50570.1;Parent=gene-CLI77_00840;Dbxref=NCBI_GP:PDP50570.1;Name=PDP50570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458338.1;locus_tag=CLI77_00840;product=oligopeptide transporter%2C OPT family;protein_id=PDP50570.1;transl_table=11 NSLS01000001.1 Genbank gene 194898 196115 . + . ID=gene-CLI77_00845;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CLI77_00845 NSLS01000001.1 Protein Homology CDS 194898 196115 . + 0 ID=cds-PDP50571.1;Parent=gene-CLI77_00845;Dbxref=NCBI_GP:PDP50571.1;Name=PDP50571.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873392.1;locus_tag=CLI77_00845;product=peptidase T;protein_id=PDP50571.1;transl_table=11 NSLS01000001.1 Genbank gene 196245 196952 . + . ID=gene-CLI77_00850;Name=CLI77_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00850 NSLS01000001.1 Protein Homology CDS 196245 196952 . + 0 ID=cds-PDP50651.1;Parent=gene-CLI77_00850;Dbxref=NCBI_GP:PDP50651.1;Name=PDP50651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873390.1;locus_tag=CLI77_00850;product=thiamine biosynthesis protein ThiF;protein_id=PDP50651.1;transl_table=11 NSLS01000001.1 Genbank gene 197008 197742 . + . ID=gene-CLI77_00855;Name=CLI77_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00855 NSLS01000001.1 Protein Homology CDS 197008 197742 . + 0 ID=cds-PDP50572.1;Parent=gene-CLI77_00855;Dbxref=NCBI_GP:PDP50572.1;Name=PDP50572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816230.1;locus_tag=CLI77_00855;product=pantothenate kinase;protein_id=PDP50572.1;transl_table=11 NSLS01000001.1 Genbank gene 197735 199039 . + . ID=gene-CLI77_00860;Name=CLI77_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00860 NSLS01000001.1 Protein Homology CDS 197735 199039 . + 0 ID=cds-PDP50573.1;Parent=gene-CLI77_00860;Dbxref=NCBI_GP:PDP50573.1;Name=PDP50573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816231.1;locus_tag=CLI77_00860;product=hypothetical protein;protein_id=PDP50573.1;transl_table=11 NSLS01000001.1 Genbank gene 199081 200433 . + . ID=gene-CLI77_00865;Name=CLI77_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00865 NSLS01000001.1 Protein Homology CDS 199081 200433 . + 0 ID=cds-PDP50574.1;Parent=gene-CLI77_00865;Dbxref=NCBI_GP:PDP50574.1;Name=PDP50574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458333.1;locus_tag=CLI77_00865;product=hypothetical protein;protein_id=PDP50574.1;transl_table=11 NSLS01000001.1 Genbank gene 200464 201168 . + . ID=gene-CLI77_00870;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CLI77_00870 NSLS01000001.1 Protein Homology CDS 200464 201168 . + 0 ID=cds-PDP50575.1;Parent=gene-CLI77_00870;Dbxref=NCBI_GP:PDP50575.1;Name=PDP50575.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873389.1;locus_tag=CLI77_00870;product=LPS export ABC transporter periplasmic protein LptC;protein_id=PDP50575.1;transl_table=11 NSLS01000001.1 Genbank gene 201165 202418 . + . ID=gene-CLI77_00875;Name=CLI77_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00875 NSLS01000001.1 Protein Homology CDS 201165 202418 . + 0 ID=cds-PDP50576.1;Parent=gene-CLI77_00875;Dbxref=NCBI_GP:PDP50576.1;Name=PDP50576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584985.1;locus_tag=CLI77_00875;product=hemolysin;protein_id=PDP50576.1;transl_table=11 NSLS01000001.1 Genbank gene 202525 204672 . + . ID=gene-CLI77_00880;Name=CLI77_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00880 NSLS01000001.1 Protein Homology CDS 202525 204672 . + 0 ID=cds-PDP50577.1;Parent=gene-CLI77_00880;Dbxref=NCBI_GP:PDP50577.1;Name=PDP50577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584986.1;locus_tag=CLI77_00880;product=peptidylprolyl isomerase;protein_id=PDP50577.1;transl_table=11 NSLS01000001.1 Genbank gene 204961 206235 . + . ID=gene-CLI77_00885;Name=CLI77_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00885 NSLS01000001.1 Protein Homology CDS 204961 206235 . + 0 ID=cds-PDP50578.1;Parent=gene-CLI77_00885;Dbxref=NCBI_GP:PDP50578.1;Name=PDP50578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584987.1;locus_tag=CLI77_00885;product=hypothetical protein;protein_id=PDP50578.1;transl_table=11 NSLS01000001.1 Genbank gene 206880 208193 . + . ID=gene-CLI77_00890;Name=CLI77_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00890 NSLS01000001.1 Protein Homology CDS 206880 208193 . + 0 ID=cds-PDP50579.1;Parent=gene-CLI77_00890;Dbxref=NCBI_GP:PDP50579.1;Name=PDP50579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584988.1;locus_tag=CLI77_00890;product=hypothetical protein;protein_id=PDP50579.1;transl_table=11 NSLS01000001.1 Genbank gene 208168 209262 . + . ID=gene-CLI77_00895;Name=CLI77_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00895 NSLS01000001.1 Protein Homology CDS 208168 209262 . + 0 ID=cds-PDP50580.1;Parent=gene-CLI77_00895;Dbxref=NCBI_GP:PDP50580.1;Name=PDP50580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16872.3;locus_tag=CLI77_00895;product=hypothetical protein;protein_id=PDP50580.1;transl_table=11 NSLS01000001.1 Genbank gene 209939 211342 . - . ID=gene-CLI77_00900;Name=CLI77_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00900 NSLS01000001.1 Protein Homology CDS 209939 211342 . - 0 ID=cds-PDP50581.1;Parent=gene-CLI77_00900;Dbxref=NCBI_GP:PDP50581.1;Name=PDP50581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956030.1;locus_tag=CLI77_00900;product=MFS transporter;protein_id=PDP50581.1;transl_table=11 NSLS01000001.1 Genbank gene 211380 212669 . - . ID=gene-CLI77_00905;Name=CLI77_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00905 NSLS01000001.1 Protein Homology CDS 211380 212669 . - 0 ID=cds-PDP50582.1;Parent=gene-CLI77_00905;Dbxref=NCBI_GP:PDP50582.1;Name=PDP50582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816241.1;locus_tag=CLI77_00905;product=dihydrofolate synthase;protein_id=PDP50582.1;transl_table=11 NSLS01000001.1 Genbank gene 212666 213937 . - . ID=gene-CLI77_00910;Name=CLI77_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00910 NSLS01000001.1 Protein Homology CDS 212666 213937 . - 0 ID=cds-PDP50583.1;Parent=gene-CLI77_00910;Dbxref=NCBI_GP:PDP50583.1;Name=PDP50583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873852.1;locus_tag=CLI77_00910;product=adenylosuccinate synthase;protein_id=PDP50583.1;transl_table=11 NSLS01000001.1 Genbank gene 213966 214466 . - . ID=gene-CLI77_00915;Name=CLI77_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00915 NSLS01000001.1 Protein Homology CDS 213966 214466 . - 0 ID=cds-PDP50652.1;Parent=gene-CLI77_00915;Dbxref=NCBI_GP:PDP50652.1;Name=PDP50652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458324.1;locus_tag=CLI77_00915;product=Fur family transcriptional regulator;protein_id=PDP50652.1;transl_table=11 NSLS01000001.1 Genbank gene 214552 215424 . - . ID=gene-CLI77_00920;Name=CLI77_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00920 NSLS01000001.1 Protein Homology CDS 214552 215424 . - 0 ID=cds-PDP50584.1;Parent=gene-CLI77_00920;Dbxref=NCBI_GP:PDP50584.1;Name=PDP50584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584995.1;locus_tag=CLI77_00920;product=DUF3298 domain-containing protein;protein_id=PDP50584.1;transl_table=11 NSLS01000001.1 Genbank gene 215437 216447 . - . ID=gene-CLI77_00925;Name=CLI77_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00925 NSLS01000001.1 Protein Homology CDS 215437 216447 . - 0 ID=cds-PDP50585.1;Parent=gene-CLI77_00925;Dbxref=NCBI_GP:PDP50585.1;Name=PDP50585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458323.1;locus_tag=CLI77_00925;product=mannose-6-phosphate isomerase;protein_id=PDP50585.1;transl_table=11 NSLS01000001.1 Genbank gene 216470 216721 . - . ID=gene-CLI77_00930;Name=CLI77_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00930 NSLS01000001.1 Protein Homology CDS 216470 216721 . - 0 ID=cds-PDP50586.1;Parent=gene-CLI77_00930;Dbxref=NCBI_GP:PDP50586.1;Name=PDP50586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584997.1;locus_tag=CLI77_00930;product=hypothetical protein;protein_id=PDP50586.1;transl_table=11 NSLS01000001.1 Genbank gene 217407 218465 . + . ID=gene-CLI77_00935;Name=CLI77_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00935 NSLS01000001.1 Protein Homology CDS 217407 218465 . + 0 ID=cds-PDP50587.1;Parent=gene-CLI77_00935;Dbxref=NCBI_GP:PDP50587.1;Name=PDP50587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458320.1;locus_tag=CLI77_00935;product=hypothetical protein;protein_id=PDP50587.1;transl_table=11 NSLS01000001.1 Genbank gene 218452 219447 . + . ID=gene-CLI77_00940;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CLI77_00940 NSLS01000001.1 Protein Homology CDS 218452 219447 . + 0 ID=cds-PDP50588.1;Parent=gene-CLI77_00940;Dbxref=NCBI_GP:PDP50588.1;Name=PDP50588.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964417.1;locus_tag=CLI77_00940;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=PDP50588.1;transl_table=11 NSLS01000001.1 Genbank gene 219577 219978 . + . ID=gene-CLI77_00945;Name=CLI77_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00945 NSLS01000001.1 Protein Homology CDS 219577 219978 . + 0 ID=cds-PDP50589.1;Parent=gene-CLI77_00945;Dbxref=NCBI_GP:PDP50589.1;Name=PDP50589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816246.1;locus_tag=CLI77_00945;product=DUF4248 domain-containing protein;protein_id=PDP50589.1;transl_table=11 NSLS01000001.1 Genbank gene 220074 221108 . - . ID=gene-CLI77_00950;Name=CLI77_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00950 NSLS01000001.1 Protein Homology CDS 220074 221108 . - 0 ID=cds-PDP50590.1;Parent=gene-CLI77_00950;Dbxref=NCBI_GP:PDP50590.1;Name=PDP50590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873862.1;locus_tag=CLI77_00950;product=threonine aldolase;protein_id=PDP50590.1;transl_table=11 NSLS01000001.1 Genbank gene 221148 222278 . - . ID=gene-CLI77_00955;Name=CLI77_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00955 NSLS01000001.1 Protein Homology CDS 221148 222278 . - 0 ID=cds-PDP50591.1;Parent=gene-CLI77_00955;Dbxref=NCBI_GP:PDP50591.1;Name=PDP50591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816248.1;locus_tag=CLI77_00955;product=coproporphyrinogen III oxidase;protein_id=PDP50591.1;transl_table=11 NSLS01000001.1 Genbank gene 222275 223822 . - . ID=gene-CLI77_00960;Name=CLI77_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00960 NSLS01000001.1 Protein Homology CDS 222275 223822 . - 0 ID=cds-PDP50592.1;Parent=gene-CLI77_00960;Dbxref=NCBI_GP:PDP50592.1;Name=PDP50592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585006.1;locus_tag=CLI77_00960;product=hypothetical protein;protein_id=PDP50592.1;transl_table=11 NSLS01000001.1 Genbank gene 223812 224657 . - . ID=gene-CLI77_00965;Name=CLI77_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00965 NSLS01000001.1 Protein Homology CDS 223812 224657 . - 0 ID=cds-PDP50593.1;Parent=gene-CLI77_00965;Dbxref=NCBI_GP:PDP50593.1;Name=PDP50593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873851.1;locus_tag=CLI77_00965;product=pantoate--beta-alanine ligase;protein_id=PDP50593.1;transl_table=11 NSLS01000001.1 Genbank gene 224818 225576 . + . ID=gene-CLI77_00970;Name=CLI77_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00970 NSLS01000001.1 Protein Homology CDS 224818 225576 . + 0 ID=cds-PDP50594.1;Parent=gene-CLI77_00970;Dbxref=NCBI_GP:PDP50594.1;Name=PDP50594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458313.1;locus_tag=CLI77_00970;product=hypothetical protein;protein_id=PDP50594.1;transl_table=11 NSLS01000001.1 Genbank gene 225667 226380 . - . ID=gene-CLI77_00975;Name=CLI77_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00975 NSLS01000001.1 Protein Homology CDS 225667 226380 . - 0 ID=cds-PDP50595.1;Parent=gene-CLI77_00975;Dbxref=NCBI_GP:PDP50595.1;Name=PDP50595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585009.1;locus_tag=CLI77_00975;product=precorrin-2 C(20)-methyltransferase;protein_id=PDP50595.1;transl_table=11 NSLS01000001.1 Genbank gene 226491 227681 . - . ID=gene-CLI77_00980;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CLI77_00980 NSLS01000001.1 Protein Homology CDS 226491 227681 . - 0 ID=cds-PDP50596.1;Parent=gene-CLI77_00980;Dbxref=NCBI_GP:PDP50596.1;Name=PDP50596.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018710485.1;locus_tag=CLI77_00980;product=glycine C-acetyltransferase;protein_id=PDP50596.1;transl_table=11 NSLS01000001.1 Genbank gene 227757 228188 . - . ID=gene-CLI77_00985;Name=CLI77_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00985 NSLS01000001.1 Protein Homology CDS 227757 228188 . - 0 ID=cds-PDP50597.1;Parent=gene-CLI77_00985;Dbxref=NCBI_GP:PDP50597.1;Name=PDP50597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816254.1;locus_tag=CLI77_00985;product=hypothetical protein;protein_id=PDP50597.1;transl_table=11 NSLS01000001.1 Genbank gene 228295 228903 . - . ID=gene-CLI77_00990;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CLI77_00990 NSLS01000001.1 Protein Homology CDS 228295 228903 . - 0 ID=cds-PDP50598.1;Parent=gene-CLI77_00990;Dbxref=NCBI_GP:PDP50598.1;Name=PDP50598.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585012.1;locus_tag=CLI77_00990;product=dephospho-CoA kinase;protein_id=PDP50598.1;transl_table=11 NSLS01000001.1 Genbank gene 228910 229917 . - . ID=gene-CLI77_00995;Name=CLI77_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_00995 NSLS01000001.1 Protein Homology CDS 228910 229917 . - 0 ID=cds-PDP50599.1;Parent=gene-CLI77_00995;Dbxref=NCBI_GP:PDP50599.1;Name=PDP50599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458309.1;locus_tag=CLI77_00995;product=hypothetical protein;protein_id=PDP50599.1;transl_table=11 NSLS01000001.1 Genbank gene 230055 230393 . - . ID=gene-CLI77_01000;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CLI77_01000 NSLS01000001.1 Protein Homology CDS 230055 230393 . - 0 ID=cds-PDP50600.1;Parent=gene-CLI77_01000;Dbxref=NCBI_GP:PDP50600.1;Name=PDP50600.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585014.1;locus_tag=CLI77_01000;product=preprotein translocase subunit YajC;protein_id=PDP50600.1;transl_table=11 NSLS01000001.1 Genbank gene 230476 230910 . - . ID=gene-CLI77_01005;Name=CLI77_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01005 NSLS01000001.1 Protein Homology CDS 230476 230910 . - 0 ID=cds-PDP50653.1;Parent=gene-CLI77_01005;Dbxref=NCBI_GP:PDP50653.1;Name=PDP50653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585015.1;locus_tag=CLI77_01005;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=PDP50653.1;transl_table=11 NSLS01000001.1 Genbank gene 230987 231220 . + . ID=gene-CLI77_01010;Name=CLI77_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01010 NSLS01000001.1 GeneMarkS+ CDS 230987 231220 . + 0 ID=cds-PDP50601.1;Parent=gene-CLI77_01010;Dbxref=NCBI_GP:PDP50601.1;Name=PDP50601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_01010;product=hypothetical protein;protein_id=PDP50601.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 231230 231440 . + . ID=gene-CLI77_01015;Name=CLI77_01015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01015;pseudo=true NSLS01000001.1 Protein Homology CDS 231230 231440 . + 0 ID=cds-CLI77_01015;Parent=gene-CLI77_01015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956103.1;locus_tag=CLI77_01015;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 231886 232917 . + . ID=gene-CLI77_01020;Name=CLI77_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01020 NSLS01000001.1 Protein Homology CDS 231886 232917 . + 0 ID=cds-PDP50602.1;Parent=gene-CLI77_01020;Dbxref=NCBI_GP:PDP50602.1;Name=PDP50602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956038.1;locus_tag=CLI77_01020;product=Holliday junction branch migration DNA helicase RuvB;protein_id=PDP50602.1;transl_table=11 NSLS01000001.1 Genbank gene 232964 234445 . + . ID=gene-CLI77_01025;Name=CLI77_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01025 NSLS01000001.1 Protein Homology CDS 232964 234445 . + 0 ID=cds-PDP50654.1;Parent=gene-CLI77_01025;Dbxref=NCBI_GP:PDP50654.1;Name=PDP50654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816258.1;locus_tag=CLI77_01025;product=polysaccharide biosynthesis protein;protein_id=PDP50654.1;transl_table=11 NSLS01000001.1 Genbank gene 234467 235885 . + . ID=gene-CLI77_01030;Name=CLI77_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01030 NSLS01000001.1 Protein Homology CDS 234467 235885 . + 0 ID=cds-PDP50603.1;Parent=gene-CLI77_01030;Dbxref=NCBI_GP:PDP50603.1;Name=PDP50603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585020.1;locus_tag=CLI77_01030;product=DUF389 domain-containing protein;protein_id=PDP50603.1;transl_table=11 NSLS01000001.1 Genbank gene 235907 238039 . + . ID=gene-CLI77_01035;Name=CLI77_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01035 NSLS01000001.1 Protein Homology CDS 235907 238039 . + 0 ID=cds-PDP50604.1;Parent=gene-CLI77_01035;Dbxref=NCBI_GP:PDP50604.1;Name=PDP50604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874121.1;locus_tag=CLI77_01035;product=peptidase S10;protein_id=PDP50604.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 238075 238334 . - . ID=gene-CLI77_01040;Name=CLI77_01040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01040;pseudo=true NSLS01000001.1 Protein Homology CDS 238075 238334 . - 0 ID=cds-CLI77_01040;Parent=gene-CLI77_01040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874117.1;locus_tag=CLI77_01040;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 238806 239003 . - . ID=gene-CLI77_01045;Name=CLI77_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01045 NSLS01000001.1 Protein Homology CDS 238806 239003 . - 0 ID=cds-PDP50605.1;Parent=gene-CLI77_01045;Dbxref=NCBI_GP:PDP50605.1;Name=PDP50605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815125.1;locus_tag=CLI77_01045;product=hypothetical protein;protein_id=PDP50605.1;transl_table=11 NSLS01000001.1 Genbank gene 239210 240619 . + . ID=gene-CLI77_01050;Name=CLI77_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01050 NSLS01000001.1 Protein Homology CDS 239210 240619 . + 0 ID=cds-PDP50606.1;Parent=gene-CLI77_01050;Dbxref=NCBI_GP:PDP50606.1;Name=PDP50606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585025.1;locus_tag=CLI77_01050;product=T9SS C-terminal target domain-containing protein;protein_id=PDP50606.1;transl_table=11 NSLS01000001.1 Genbank gene 241019 241705 . + . ID=gene-CLI77_01055;Name=CLI77_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01055 NSLS01000001.1 Protein Homology CDS 241019 241705 . + 0 ID=cds-PDP50607.1;Parent=gene-CLI77_01055;Dbxref=NCBI_GP:PDP50607.1;Name=PDP50607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873902.1;locus_tag=CLI77_01055;product=5'-methylthioadenosine nucleosidase;protein_id=PDP50607.1;transl_table=11 NSLS01000001.1 Genbank gene 241730 242209 . + . ID=gene-CLI77_01060;Name=CLI77_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01060 NSLS01000001.1 Protein Homology CDS 241730 242209 . + 0 ID=cds-PDP50655.1;Parent=gene-CLI77_01060;Dbxref=NCBI_GP:PDP50655.1;Name=PDP50655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458299.1;locus_tag=CLI77_01060;product=S-ribosylhomocysteine lyase;protein_id=PDP50655.1;transl_table=11 NSLS01000001.1 Genbank pseudogene 242469 242864 . + . ID=gene-CLI77_01065;Name=CLI77_01065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01065;pseudo=true NSLS01000001.1 Protein Homology CDS 242469 242864 . + 0 ID=cds-CLI77_01065;Parent=gene-CLI77_01065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815929.1;locus_tag=CLI77_01065;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000001.1 Genbank gene 242996 244126 . + . ID=gene-CLI77_01070;Name=CLI77_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01070 NSLS01000001.1 Protein Homology CDS 242996 244126 . + 0 ID=cds-PDP50608.1;Parent=gene-CLI77_01070;Dbxref=NCBI_GP:PDP50608.1;Name=PDP50608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585039.1;locus_tag=CLI77_01070;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=PDP50608.1;transl_table=11 NSLS01000001.1 Genbank gene 244143 245225 . + . ID=gene-CLI77_01075;Name=CLI77_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01075 NSLS01000001.1 Protein Homology CDS 244143 245225 . + 0 ID=cds-PDP50609.1;Parent=gene-CLI77_01075;Dbxref=NCBI_GP:PDP50609.1;Name=PDP50609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956046.1;locus_tag=CLI77_01075;product=YjgP/YjgQ family permease;protein_id=PDP50609.1;transl_table=11 NSLS01000001.1 Genbank gene 245258 245719 . + . ID=gene-CLI77_01080;Name=CLI77_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01080 NSLS01000001.1 Protein Homology CDS 245258 245719 . + 0 ID=cds-PDP50610.1;Parent=gene-CLI77_01080;Dbxref=NCBI_GP:PDP50610.1;Name=PDP50610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007657455.1;locus_tag=CLI77_01080;product=SsrA-binding protein;protein_id=PDP50610.1;transl_table=11 NSLS01000001.1 Genbank gene 245759 247930 . + . ID=gene-CLI77_01085;Name=CLI77_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01085 NSLS01000001.1 Protein Homology CDS 245759 247930 . + 0 ID=cds-PDP50611.1;Parent=gene-CLI77_01085;Dbxref=NCBI_GP:PDP50611.1;Name=PDP50611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585042.1;locus_tag=CLI77_01085;product=S9 family peptidase;protein_id=PDP50611.1;transl_table=11 NSLS01000001.1 Genbank gene 248033 248881 . + . ID=gene-CLI77_01090;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CLI77_01090 NSLS01000001.1 Protein Homology CDS 248033 248881 . + 0 ID=cds-PDP50612.1;Parent=gene-CLI77_01090;Dbxref=NCBI_GP:PDP50612.1;Name=PDP50612.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965023.1;locus_tag=CLI77_01090;product=lipoyl synthase;protein_id=PDP50612.1;transl_table=11 NSLS01000001.1 Genbank gene 249134 251344 . + . ID=gene-CLI77_01095;Name=CLI77_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01095 NSLS01000001.1 Protein Homology CDS 249134 251344 . + 0 ID=cds-PDP50613.1;Parent=gene-CLI77_01095;Dbxref=NCBI_GP:PDP50613.1;Name=PDP50613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458292.1;locus_tag=CLI77_01095;product=peptidase C25;protein_id=PDP50613.1;transl_table=11 NSLS01000001.1 Genbank gene 251885 252487 . - . ID=gene-CLI77_01100;Name=CLI77_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01100 NSLS01000001.1 Protein Homology CDS 251885 252487 . - 0 ID=cds-PDP50614.1;Parent=gene-CLI77_01100;Dbxref=NCBI_GP:PDP50614.1;Name=PDP50614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458290.1;locus_tag=CLI77_01100;product=HAD-IB family hydrolase;protein_id=PDP50614.1;transl_table=11 NSLS01000001.1 Genbank gene 252477 253337 . - . ID=gene-CLI77_01105;Name=CLI77_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01105 NSLS01000001.1 Protein Homology CDS 252477 253337 . - 0 ID=cds-PDP50615.1;Parent=gene-CLI77_01105;Dbxref=NCBI_GP:PDP50615.1;Name=PDP50615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965019.1;locus_tag=CLI77_01105;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=PDP50615.1;transl_table=11 NSLS01000001.1 Genbank gene 253354 253809 . - . ID=gene-CLI77_01110;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CLI77_01110 NSLS01000001.1 Protein Homology CDS 253354 253809 . - 0 ID=cds-PDP50616.1;Parent=gene-CLI77_01110;Dbxref=NCBI_GP:PDP50616.1;Name=PDP50616.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585050.1;locus_tag=CLI77_01110;product=rRNA maturation RNase YbeY;protein_id=PDP50616.1;transl_table=11 NSLS01000001.1 Genbank gene 253845 255077 . - . ID=gene-CLI77_01115;Name=CLI77_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01115 NSLS01000001.1 Protein Homology CDS 253845 255077 . - 0 ID=cds-PDP50617.1;Parent=gene-CLI77_01115;Dbxref=NCBI_GP:PDP50617.1;Name=PDP50617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965017.1;locus_tag=CLI77_01115;product=hypothetical protein;protein_id=PDP50617.1;transl_table=11 NSLS01000001.1 Genbank gene 255097 255663 . - . ID=gene-CLI77_01120;Name=CLI77_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01120 NSLS01000001.1 Protein Homology CDS 255097 255663 . - 0 ID=cds-PDP50618.1;Parent=gene-CLI77_01120;Dbxref=NCBI_GP:PDP50618.1;Name=PDP50618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585052.1;locus_tag=CLI77_01120;product=guanylate kinase;protein_id=PDP50618.1;transl_table=11 NSLS01000001.1 Genbank gene 255694 256584 . - . ID=gene-CLI77_01125;Name=CLI77_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01125 NSLS01000001.1 Protein Homology CDS 255694 256584 . - 0 ID=cds-PDP50619.1;Parent=gene-CLI77_01125;Dbxref=NCBI_GP:PDP50619.1;Name=PDP50619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965015.1;locus_tag=CLI77_01125;product=YicC family protein;protein_id=PDP50619.1;transl_table=11 NSLS01000001.1 Genbank gene 256676 260017 . - . ID=gene-CLI77_01130;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CLI77_01130 NSLS01000001.1 Protein Homology CDS 256676 260017 . - 0 ID=cds-PDP50620.1;Parent=gene-CLI77_01130;Dbxref=NCBI_GP:PDP50620.1;Name=PDP50620.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965014.1;locus_tag=CLI77_01130;product=protein translocase subunit SecA;protein_id=PDP50620.1;transl_table=11 NSLS01000001.1 Genbank gene 260111 261706 . - . ID=gene-CLI77_01135;Name=CLI77_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01135 NSLS01000001.1 Protein Homology CDS 260111 261706 . - 0 ID=cds-PDP50621.1;Parent=gene-CLI77_01135;Dbxref=NCBI_GP:PDP50621.1;Name=PDP50621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965013.1;locus_tag=CLI77_01135;product=alkaline phosphatase family protein;protein_id=PDP50621.1;transl_table=11 NSLS01000001.1 Genbank gene 261685 262932 . - . ID=gene-CLI77_01140;Name=CLI77_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01140 NSLS01000001.1 Protein Homology CDS 261685 262932 . - 0 ID=cds-PDP50622.1;Parent=gene-CLI77_01140;Dbxref=NCBI_GP:PDP50622.1;Name=PDP50622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816281.1;locus_tag=CLI77_01140;product=DUF4105 domain-containing protein;protein_id=PDP50622.1;transl_table=11 NSLS01000001.1 Genbank gene 262963 265986 . - . ID=gene-CLI77_01145;Name=CLI77_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01145 NSLS01000001.1 Protein Homology CDS 262963 265986 . - 0 ID=cds-PDP50623.1;Parent=gene-CLI77_01145;Dbxref=NCBI_GP:PDP50623.1;Name=PDP50623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965011.1;locus_tag=CLI77_01145;product=PD-(D/E)XK nuclease family protein;protein_id=PDP50623.1;transl_table=11 NSLS01000001.1 Genbank gene 265962 266687 . - . ID=gene-CLI77_01150;Name=CLI77_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01150 NSLS01000001.1 Protein Homology CDS 265962 266687 . - 0 ID=cds-PDP50624.1;Parent=gene-CLI77_01150;Dbxref=NCBI_GP:PDP50624.1;Name=PDP50624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875091.1;locus_tag=CLI77_01150;product=CPBP family intramembrane metalloprotease;protein_id=PDP50624.1;transl_table=11 NSLS01000001.1 Genbank gene 266895 266981 . - . ID=gene-CLI77_01155;Name=CLI77_01155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01155 NSLS01000001.1 tRNAscan-SE tRNA 266895 266981 . - . ID=rna-CLI77_01155;Parent=gene-CLI77_01155;anticodon=(pos:complement(266945..266947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01155;product=tRNA-Ser NSLS01000001.1 tRNAscan-SE exon 266895 266981 . - . ID=exon-CLI77_01155-1;Parent=rna-CLI77_01155;anticodon=(pos:complement(266945..266947));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01155;product=tRNA-Ser NSLS01000001.1 Genbank gene 267366 269003 . - . ID=gene-CLI77_01160;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CLI77_01160 NSLS01000001.1 Protein Homology CDS 267366 269003 . - 0 ID=cds-PDP50625.1;Parent=gene-CLI77_01160;Dbxref=NCBI_GP:PDP50625.1;Name=PDP50625.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585059.1;locus_tag=CLI77_01160;product=chaperonin GroEL;protein_id=PDP50625.1;transl_table=11 NSLS01000001.1 Genbank gene 269135 269404 . - . ID=gene-CLI77_01165;Name=CLI77_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01165 NSLS01000001.1 Protein Homology CDS 269135 269404 . - 0 ID=cds-PDP50626.1;Parent=gene-CLI77_01165;Dbxref=NCBI_GP:PDP50626.1;Name=PDP50626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005858788.1;locus_tag=CLI77_01165;product=co-chaperone GroES;protein_id=PDP50626.1;transl_table=11 NSLS01000001.1 Genbank gene 269622 270530 . - . ID=gene-CLI77_01170;Name=CLI77_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01170 NSLS01000001.1 Protein Homology CDS 269622 270530 . - 0 ID=cds-PDP50627.1;Parent=gene-CLI77_01170;Dbxref=NCBI_GP:PDP50627.1;Name=PDP50627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816285.1;locus_tag=CLI77_01170;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP50627.1;transl_table=11 NSLS01000001.1 Genbank gene 270527 272023 . - . ID=gene-CLI77_01175;Name=CLI77_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01175 NSLS01000001.1 Protein Homology CDS 270527 272023 . - 0 ID=cds-PDP50656.1;Parent=gene-CLI77_01175;Dbxref=NCBI_GP:PDP50656.1;Name=PDP50656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100813.1;locus_tag=CLI77_01175;product=inosine 5-monophosphate dehydrogenase;protein_id=PDP50656.1;transl_table=11 NSLS01000001.1 Genbank gene 272278 272562 . + . ID=gene-CLI77_01180;Name=CLI77_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01180 NSLS01000001.1 Protein Homology CDS 272278 272562 . + 0 ID=cds-PDP50628.1;Parent=gene-CLI77_01180;Dbxref=NCBI_GP:PDP50628.1;Name=PDP50628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816287.1;locus_tag=CLI77_01180;product=DUF1661 domain-containing protein;protein_id=PDP50628.1;transl_table=11 NSLS01000001.1 Genbank gene 272678 274297 . + . ID=gene-CLI77_01185;Name=CLI77_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01185 NSLS01000001.1 Protein Homology CDS 272678 274297 . + 0 ID=cds-PDP50629.1;Parent=gene-CLI77_01185;Dbxref=NCBI_GP:PDP50629.1;Name=PDP50629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585065.1;locus_tag=CLI77_01185;product=CTP synthetase;protein_id=PDP50629.1;transl_table=11 NSLS01000001.1 Genbank gene 274424 276307 . + . ID=gene-CLI77_01190;Name=CLI77_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01190 NSLS01000001.1 Protein Homology CDS 274424 276307 . + 0 ID=cds-PDP50630.1;Parent=gene-CLI77_01190;Dbxref=NCBI_GP:PDP50630.1;Name=PDP50630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875081.1;locus_tag=CLI77_01190;product=membrane protein insertase YidC;protein_id=PDP50630.1;transl_table=11 NSLS01000001.1 Genbank gene 276398 278281 . + . ID=gene-CLI77_01195;Name=CLI77_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01195 NSLS01000001.1 Protein Homology CDS 276398 278281 . + 0 ID=cds-PDP50631.1;Parent=gene-CLI77_01195;Dbxref=NCBI_GP:PDP50631.1;Name=PDP50631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875082.1;locus_tag=CLI77_01195;product=amidophosphoribosyltransferase;protein_id=PDP50631.1;transl_table=11 NSLS01000001.1 Genbank gene 278315 279388 . + . ID=gene-CLI77_01200;Name=CLI77_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01200 NSLS01000001.1 Protein Homology CDS 278315 279388 . + 0 ID=cds-PDP50632.1;Parent=gene-CLI77_01200;Dbxref=NCBI_GP:PDP50632.1;Name=PDP50632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458274.1;locus_tag=CLI77_01200;product=carbamoyl phosphate synthase small subunit;protein_id=PDP50632.1;transl_table=11 NSLS01000001.1 Genbank gene 279407 282634 . + . ID=gene-CLI77_01205;Name=CLI77_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01205 NSLS01000001.1 Protein Homology CDS 279407 282634 . + 0 ID=cds-PDP50633.1;Parent=gene-CLI77_01205;Dbxref=NCBI_GP:PDP50633.1;Name=PDP50633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875074.1;locus_tag=CLI77_01205;product=carbamoyl phosphate synthase large subunit;protein_id=PDP50633.1;transl_table=11 NSLS01000001.1 Genbank gene 282827 284770 . - . ID=gene-CLI77_01210;Name=CLI77_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01210 NSLS01000001.1 Protein Homology CDS 282827 284770 . - 0 ID=cds-PDP50634.1;Parent=gene-CLI77_01210;Dbxref=NCBI_GP:PDP50634.1;Name=PDP50634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956057.1;locus_tag=CLI77_01210;product=NAD(+) synthase;protein_id=PDP50634.1;transl_table=11 NSLS01000001.1 Genbank gene 284880 285728 . - . ID=gene-CLI77_01215;Name=CLI77_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01215 NSLS01000001.1 Protein Homology CDS 284880 285728 . - 0 ID=cds-PDP50635.1;Parent=gene-CLI77_01215;Dbxref=NCBI_GP:PDP50635.1;Name=PDP50635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585071.1;locus_tag=CLI77_01215;product=vancomycin resistance protein;protein_id=PDP50635.1;transl_table=11 NSLS01000001.1 Genbank gene 286097 286179 . + . ID=gene-CLI77_01220;Name=CLI77_01220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01220 NSLS01000001.1 tRNAscan-SE tRNA 286097 286179 . + . ID=rna-CLI77_01220;Parent=gene-CLI77_01220;anticodon=(pos:286131..286133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01220;product=tRNA-Tyr NSLS01000001.1 tRNAscan-SE exon 286097 286179 . + . ID=exon-CLI77_01220-1;Parent=rna-CLI77_01220;anticodon=(pos:286131..286133);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01220;product=tRNA-Tyr NSLS01000001.1 Genbank gene 286213 286285 . + . ID=gene-CLI77_01225;Name=CLI77_01225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01225 NSLS01000001.1 tRNAscan-SE tRNA 286213 286285 . + . ID=rna-CLI77_01225;Parent=gene-CLI77_01225;anticodon=(pos:286246..286248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01225;product=tRNA-Gly NSLS01000001.1 tRNAscan-SE exon 286213 286285 . + . ID=exon-CLI77_01225-1;Parent=rna-CLI77_01225;anticodon=(pos:286246..286248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01225;product=tRNA-Gly NSLS01000001.1 Genbank gene 286302 286386 . + . ID=gene-CLI77_01230;Name=CLI77_01230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01230 NSLS01000001.1 tRNAscan-SE tRNA 286302 286386 . + . ID=rna-CLI77_01230;Parent=gene-CLI77_01230;anticodon=(pos:286335..286337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01230;product=tRNA-Leu NSLS01000001.1 tRNAscan-SE exon 286302 286386 . + . ID=exon-CLI77_01230-1;Parent=rna-CLI77_01230;anticodon=(pos:286335..286337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01230;product=tRNA-Leu NSLS01000001.1 Genbank gene 286435 286510 . + . ID=gene-CLI77_01235;Name=CLI77_01235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01235 NSLS01000001.1 tRNAscan-SE tRNA 286435 286510 . + . ID=rna-CLI77_01235;Parent=gene-CLI77_01235;anticodon=(pos:286468..286470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01235;product=tRNA-Gly NSLS01000001.1 tRNAscan-SE exon 286435 286510 . + . ID=exon-CLI77_01235-1;Parent=rna-CLI77_01235;anticodon=(pos:286468..286470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01235;product=tRNA-Gly NSLS01000001.1 Genbank gene 286928 289411 . + . ID=gene-CLI77_01240;Name=CLI77_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01240 NSLS01000001.1 Protein Homology CDS 286928 289411 . + 0 ID=cds-PDP50636.1;Parent=gene-CLI77_01240;Dbxref=NCBI_GP:PDP50636.1;Name=PDP50636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875072.1;locus_tag=CLI77_01240;product=TonB-dependent receptor;protein_id=PDP50636.1;transl_table=11 NSLS01000001.1 Genbank gene 289591 290211 . - . ID=gene-CLI77_01245;Name=CLI77_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01245 NSLS01000001.1 Protein Homology CDS 289591 290211 . - 0 ID=cds-PDP50637.1;Parent=gene-CLI77_01245;Dbxref=NCBI_GP:PDP50637.1;Name=PDP50637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585075.1;locus_tag=CLI77_01245;product=hypothetical protein;protein_id=PDP50637.1;transl_table=11 NSLS01000001.1 Genbank gene 290243 290458 . - . ID=gene-CLI77_01250;Name=CLI77_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01250 NSLS01000001.1 Protein Homology CDS 290243 290458 . - 0 ID=cds-PDP50638.1;Parent=gene-CLI77_01250;Dbxref=NCBI_GP:PDP50638.1;Name=PDP50638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966091.1;locus_tag=CLI77_01250;product=hypothetical protein;protein_id=PDP50638.1;transl_table=11 NSLS01000001.1 Genbank gene 290539 291999 . + . ID=gene-CLI77_01255;Name=CLI77_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01255 NSLS01000001.1 Protein Homology CDS 290539 291999 . + 0 ID=cds-PDP50639.1;Parent=gene-CLI77_01255;Dbxref=NCBI_GP:PDP50639.1;Name=PDP50639.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585077.1;locus_tag=CLI77_01255;product=cytosol nonspecific dipeptidase;protein_id=PDP50639.1;transl_table=11 NSLS01000001.1 Genbank gene 291932 292237 . - . ID=gene-CLI77_01260;Name=CLI77_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01260 NSLS01000001.1 Protein Homology CDS 291932 292237 . - 0 ID=cds-PDP50640.1;Parent=gene-CLI77_01260;Dbxref=NCBI_GP:PDP50640.1;Name=PDP50640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874092.1;locus_tag=CLI77_01260;product=hypothetical protein;protein_id=PDP50640.1;transl_table=11 NSLS01000001.1 Genbank gene 292250 293335 . - . ID=gene-CLI77_01265;Name=CLI77_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01265 NSLS01000001.1 Protein Homology CDS 292250 293335 . - 0 ID=cds-PDP50641.1;Parent=gene-CLI77_01265;Dbxref=NCBI_GP:PDP50641.1;Name=PDP50641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_01265;product=IS5/IS1182 family transposase;protein_id=PDP50641.1;transl_table=11 ##sequence-region NSLS01000020.1 1 43005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000020.1 Genbank region 1 43005 . + . ID=NSLS01000020.1:1..43005;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000020.1 Genbank gene 356 628 . - . ID=gene-CLI77_06635;Name=CLI77_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06635 NSLS01000020.1 Protein Homology CDS 356 628 . - 0 ID=cds-PDP49051.1;Parent=gene-CLI77_06635;Dbxref=NCBI_GP:PDP49051.1;Name=PDP49051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584397.1;locus_tag=CLI77_06635;product=hypothetical protein;protein_id=PDP49051.1;transl_table=11 NSLS01000020.1 Genbank gene 660 3290 . + . ID=gene-CLI77_06640;Name=CLI77_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06640 NSLS01000020.1 Protein Homology CDS 660 3290 . + 0 ID=cds-PDP49052.1;Parent=gene-CLI77_06640;Dbxref=NCBI_GP:PDP49052.1;Name=PDP49052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815878.1;locus_tag=CLI77_06640;product=valine--tRNA ligase;protein_id=PDP49052.1;transl_table=11 NSLS01000020.1 Genbank gene 3319 3771 . + . ID=gene-CLI77_06645;Name=CLI77_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06645 NSLS01000020.1 Protein Homology CDS 3319 3771 . + 0 ID=cds-PDP49053.1;Parent=gene-CLI77_06645;Dbxref=NCBI_GP:PDP49053.1;Name=PDP49053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584395.1;locus_tag=CLI77_06645;product=hypothetical protein;protein_id=PDP49053.1;transl_table=11 NSLS01000020.1 Genbank gene 3832 3904 . + . ID=gene-CLI77_06650;Name=CLI77_06650;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_06650 NSLS01000020.1 tRNAscan-SE tRNA 3832 3904 . + . ID=rna-CLI77_06650;Parent=gene-CLI77_06650;anticodon=(pos:3865..3867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06650;product=tRNA-Thr NSLS01000020.1 tRNAscan-SE exon 3832 3904 . + . ID=exon-CLI77_06650-1;Parent=rna-CLI77_06650;anticodon=(pos:3865..3867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_06650;product=tRNA-Thr NSLS01000020.1 Genbank gene 4097 5038 . + . ID=gene-CLI77_06655;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CLI77_06655 NSLS01000020.1 Protein Homology CDS 4097 5038 . + 0 ID=cds-PDP49054.1;Parent=gene-CLI77_06655;Dbxref=NCBI_GP:PDP49054.1;Name=PDP49054.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815877.1;locus_tag=CLI77_06655;product=thioredoxin-disulfide reductase;protein_id=PDP49054.1;transl_table=11 NSLS01000020.1 Genbank gene 5604 6218 . + . ID=gene-CLI77_06660;Name=CLI77_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06660 NSLS01000020.1 Protein Homology CDS 5604 6218 . + 0 ID=cds-PDP49055.1;Parent=gene-CLI77_06660;Dbxref=NCBI_GP:PDP49055.1;Name=PDP49055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815876.1;locus_tag=CLI77_06660;product=sugar transferase;protein_id=PDP49055.1;transl_table=11 NSLS01000020.1 Genbank gene 6393 8021 . - . ID=gene-CLI77_06665;Name=CLI77_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06665 NSLS01000020.1 Protein Homology CDS 6393 8021 . - 0 ID=cds-PDP49056.1;Parent=gene-CLI77_06665;Dbxref=NCBI_GP:PDP49056.1;Name=PDP49056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873629.1;locus_tag=CLI77_06665;product=asparagine synthase;protein_id=PDP49056.1;transl_table=11 NSLS01000020.1 Genbank gene 7984 9291 . - . ID=gene-CLI77_06670;Name=CLI77_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06670 NSLS01000020.1 Protein Homology CDS 7984 9291 . - 0 ID=cds-PDP49057.1;Parent=gene-CLI77_06670;Dbxref=NCBI_GP:PDP49057.1;Name=PDP49057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584391.1;locus_tag=CLI77_06670;product=polysaccharide biosynthesis protein;protein_id=PDP49057.1;transl_table=11 NSLS01000020.1 Genbank gene 9288 10412 . - . ID=gene-CLI77_06675;Name=CLI77_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06675 NSLS01000020.1 Protein Homology CDS 9288 10412 . - 0 ID=cds-PDP49079.1;Parent=gene-CLI77_06675;Dbxref=NCBI_GP:PDP49079.1;Name=PDP49079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584390.1;locus_tag=CLI77_06675;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=PDP49079.1;transl_table=11 NSLS01000020.1 Genbank gene 10622 11758 . - . ID=gene-CLI77_06680;Name=CLI77_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06680 NSLS01000020.1 Protein Homology CDS 10622 11758 . - 0 ID=cds-PDP49058.1;Parent=gene-CLI77_06680;Dbxref=NCBI_GP:PDP49058.1;Name=PDP49058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458128.1;locus_tag=CLI77_06680;product=DUF4369 domain-containing protein;protein_id=PDP49058.1;transl_table=11 NSLS01000020.1 Genbank gene 11869 12729 . - . ID=gene-CLI77_06685;Name=CLI77_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06685 NSLS01000020.1 Protein Homology CDS 11869 12729 . - 0 ID=cds-PDP49080.1;Parent=gene-CLI77_06685;Dbxref=NCBI_GP:PDP49080.1;Name=PDP49080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458129.1;locus_tag=CLI77_06685;product=glycosyl transferase family 2;protein_id=PDP49080.1;transl_table=11 NSLS01000020.1 Genbank gene 12735 13886 . - . ID=gene-CLI77_06690;Name=CLI77_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06690 NSLS01000020.1 Protein Homology CDS 12735 13886 . - 0 ID=cds-PDP49059.1;Parent=gene-CLI77_06690;Dbxref=NCBI_GP:PDP49059.1;Name=PDP49059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458130.1;locus_tag=CLI77_06690;product=glycosyl transferase;protein_id=PDP49059.1;transl_table=11 NSLS01000020.1 Genbank gene 14078 15121 . - . ID=gene-CLI77_06695;Name=CLI77_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06695 NSLS01000020.1 Protein Homology CDS 14078 15121 . - 0 ID=cds-PDP49060.1;Parent=gene-CLI77_06695;Dbxref=NCBI_GP:PDP49060.1;Name=PDP49060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584386.1;locus_tag=CLI77_06695;product=EpsG family protein;protein_id=PDP49060.1;transl_table=11 NSLS01000020.1 Genbank gene 15128 16462 . - . ID=gene-CLI77_06700;Name=CLI77_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06700 NSLS01000020.1 Protein Homology CDS 15128 16462 . - 0 ID=cds-PDP49081.1;Parent=gene-CLI77_06700;Dbxref=NCBI_GP:PDP49081.1;Name=PDP49081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965657.1;locus_tag=CLI77_06700;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=PDP49081.1;transl_table=11 NSLS01000020.1 Genbank pseudogene 16735 17851 . - . ID=gene-CLI77_06705;Name=CLI77_06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06705;pseudo=true NSLS01000020.1 Protein Homology CDS 16735 17851 . - 0 ID=cds-CLI77_06705;Parent=gene-CLI77_06705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007559958.1;locus_tag=CLI77_06705;product=peptide chain release factor 2;pseudo=true;transl_table=11 NSLS01000020.1 Genbank gene 17975 19798 . - . ID=gene-CLI77_06710;Name=CLI77_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06710 NSLS01000020.1 Protein Homology CDS 17975 19798 . - 0 ID=cds-PDP49061.1;Parent=gene-CLI77_06710;Dbxref=NCBI_GP:PDP49061.1;Name=PDP49061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965655.1;locus_tag=CLI77_06710;product=long-chain fatty acid--CoA ligase;protein_id=PDP49061.1;transl_table=11 NSLS01000020.1 Genbank gene 20844 21062 . + . ID=gene-CLI77_06715;Name=CLI77_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06715 NSLS01000020.1 Protein Homology CDS 20844 21062 . + 0 ID=cds-PDP49062.1;Parent=gene-CLI77_06715;Dbxref=NCBI_GP:PDP49062.1;Name=PDP49062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815859.1;locus_tag=CLI77_06715;product=hypothetical protein;protein_id=PDP49062.1;transl_table=11 NSLS01000020.1 Genbank gene 21222 22310 . + . ID=gene-CLI77_06720;Name=CLI77_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06720 NSLS01000020.1 Protein Homology CDS 21222 22310 . + 0 ID=cds-PDP49063.1;Parent=gene-CLI77_06720;Dbxref=NCBI_GP:PDP49063.1;Name=PDP49063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815860.1;locus_tag=CLI77_06720;product=glycosyltransferase family 4 protein;protein_id=PDP49063.1;transl_table=11 NSLS01000020.1 Genbank gene 22535 23683 . + . ID=gene-CLI77_06725;Name=CLI77_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06725 NSLS01000020.1 Protein Homology CDS 22535 23683 . + 0 ID=cds-PDP49064.1;Parent=gene-CLI77_06725;Dbxref=NCBI_GP:PDP49064.1;Name=PDP49064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965649.1;locus_tag=CLI77_06725;product=NADH-dependent alcohol dehydrogenase;protein_id=PDP49064.1;transl_table=11 NSLS01000020.1 Genbank gene 23822 24238 . + . ID=gene-CLI77_06730;Name=CLI77_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06730 NSLS01000020.1 Protein Homology CDS 23822 24238 . + 0 ID=cds-PDP49065.1;Parent=gene-CLI77_06730;Dbxref=NCBI_GP:PDP49065.1;Name=PDP49065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584375.1;locus_tag=CLI77_06730;product=hypothetical protein;protein_id=PDP49065.1;transl_table=11 NSLS01000020.1 Genbank gene 24398 25003 . + . ID=gene-CLI77_06735;Name=CLI77_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06735 NSLS01000020.1 Protein Homology CDS 24398 25003 . + 0 ID=cds-PDP49066.1;Parent=gene-CLI77_06735;Dbxref=NCBI_GP:PDP49066.1;Name=PDP49066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007756356.1;locus_tag=CLI77_06735;product=DUF4254 domain-containing protein;protein_id=PDP49066.1;transl_table=11 NSLS01000020.1 Genbank gene 25087 26142 . + . ID=gene-CLI77_06740;Name=CLI77_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06740 NSLS01000020.1 Protein Homology CDS 25087 26142 . + 0 ID=cds-PDP49067.1;Parent=gene-CLI77_06740;Dbxref=NCBI_GP:PDP49067.1;Name=PDP49067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584373.1;locus_tag=CLI77_06740;product=glycosyltransferase family 9 protein;protein_id=PDP49067.1;transl_table=11 NSLS01000020.1 Genbank gene 26126 26578 . + . ID=gene-CLI77_06745;Name=CLI77_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06745 NSLS01000020.1 Protein Homology CDS 26126 26578 . + 0 ID=cds-PDP49068.1;Parent=gene-CLI77_06745;Dbxref=NCBI_GP:PDP49068.1;Name=PDP49068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458144.1;locus_tag=CLI77_06745;product=hypothetical protein;protein_id=PDP49068.1;transl_table=11 NSLS01000020.1 Genbank gene 27135 28145 . - . ID=gene-CLI77_06750;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CLI77_06750 NSLS01000020.1 Protein Homology CDS 27135 28145 . - 0 ID=cds-PDP49082.1;Parent=gene-CLI77_06750;Dbxref=NCBI_GP:PDP49082.1;Name=PDP49082.1;gbkey=CDS;gene=cobD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956235.1;locus_tag=CLI77_06750;product=cobalamin biosynthesis protein CobD;protein_id=PDP49082.1;transl_table=11 NSLS01000020.1 Genbank gene 28159 29166 . - . ID=gene-CLI77_06755;Name=CLI77_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06755 NSLS01000020.1 Protein Homology CDS 28159 29166 . - 0 ID=cds-PDP49069.1;Parent=gene-CLI77_06755;Dbxref=NCBI_GP:PDP49069.1;Name=PDP49069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873516.1;locus_tag=CLI77_06755;product=threonine-phosphate decarboxylase;protein_id=PDP49069.1;transl_table=11 NSLS01000020.1 Genbank gene 29159 30655 . - . ID=gene-CLI77_06760;Name=CLI77_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06760 NSLS01000020.1 Protein Homology CDS 29159 30655 . - 0 ID=cds-PDP49070.1;Parent=gene-CLI77_06760;Dbxref=NCBI_GP:PDP49070.1;Name=PDP49070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815854.1;locus_tag=CLI77_06760;product=cobyric acid synthase;protein_id=PDP49070.1;transl_table=11 NSLS01000020.1 Genbank gene 30652 31218 . - . ID=gene-CLI77_06765;Name=CLI77_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06765 NSLS01000020.1 Protein Homology CDS 30652 31218 . - 0 ID=cds-PDP49071.1;Parent=gene-CLI77_06765;Dbxref=NCBI_GP:PDP49071.1;Name=PDP49071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458149.1;locus_tag=CLI77_06765;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP49071.1;transl_table=11 NSLS01000020.1 Genbank gene 31241 32560 . - . ID=gene-CLI77_06770;Name=CLI77_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06770 NSLS01000020.1 Protein Homology CDS 31241 32560 . - 0 ID=cds-PDP49072.1;Parent=gene-CLI77_06770;Dbxref=NCBI_GP:PDP49072.1;Name=PDP49072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815852.1;locus_tag=CLI77_06770;product=cobyrinate a%2Cc-diamide synthase;protein_id=PDP49072.1;transl_table=11 NSLS01000020.1 Genbank direct_repeat 32781 33146 . + . ID=id-NSLS01000020.1:32781..33146;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=32781..32816;rpt_unit_seq=gttgtctccacccttctaactaagggtattcccaac NSLS01000020.1 Genbank gene 33155 36562 . - . ID=gene-CLI77_06775;Name=CLI77_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06775 NSLS01000020.1 Protein Homology CDS 33155 36562 . - 0 ID=cds-PDP49073.1;Parent=gene-CLI77_06775;Dbxref=NCBI_GP:PDP49073.1;Name=PDP49073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458151.1;locus_tag=CLI77_06775;product=hypothetical protein;protein_id=PDP49073.1;transl_table=11 NSLS01000020.1 Genbank gene 36559 37275 . - . ID=gene-CLI77_06780;Name=CLI77_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06780 NSLS01000020.1 Protein Homology CDS 36559 37275 . - 0 ID=cds-PDP49074.1;Parent=gene-CLI77_06780;Dbxref=NCBI_GP:PDP49074.1;Name=PDP49074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458152.1;locus_tag=CLI77_06780;product=hypothetical protein;protein_id=PDP49074.1;transl_table=11 NSLS01000020.1 Genbank gene 38266 39138 . + . ID=gene-CLI77_06785;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CLI77_06785 NSLS01000020.1 Protein Homology CDS 38266 39138 . + 0 ID=cds-PDP49075.1;Parent=gene-CLI77_06785;Dbxref=NCBI_GP:PDP49075.1;Name=PDP49075.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458155.1;locus_tag=CLI77_06785;product=phosphoserine phosphatase SerB;protein_id=PDP49075.1;transl_table=11 NSLS01000020.1 Genbank gene 39378 40199 . + . ID=gene-CLI77_06790;Name=CLI77_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06790 NSLS01000020.1 Protein Homology CDS 39378 40199 . + 0 ID=cds-PDP49076.1;Parent=gene-CLI77_06790;Dbxref=NCBI_GP:PDP49076.1;Name=PDP49076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815803.1;locus_tag=CLI77_06790;product=Fe-S oxidoreductase;protein_id=PDP49076.1;transl_table=11 NSLS01000020.1 Genbank gene 40196 41563 . + . ID=gene-CLI77_06795;Name=CLI77_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06795 NSLS01000020.1 Protein Homology CDS 40196 41563 . + 0 ID=cds-PDP49077.1;Parent=gene-CLI77_06795;Dbxref=NCBI_GP:PDP49077.1;Name=PDP49077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458157.1;locus_tag=CLI77_06795;product=4Fe-4S ferredoxin;protein_id=PDP49077.1;transl_table=11 NSLS01000020.1 Genbank gene 41569 42153 . + . ID=gene-CLI77_06800;Name=CLI77_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06800 NSLS01000020.1 Protein Homology CDS 41569 42153 . + 0 ID=cds-PDP49083.1;Parent=gene-CLI77_06800;Dbxref=NCBI_GP:PDP49083.1;Name=PDP49083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815801.1;locus_tag=CLI77_06800;product=hypothetical protein;protein_id=PDP49083.1;transl_table=11 NSLS01000020.1 Genbank gene 42264 42737 . - . ID=gene-CLI77_06805;Name=CLI77_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06805 NSLS01000020.1 Protein Homology CDS 42264 42737 . - 0 ID=cds-PDP49078.1;Parent=gene-CLI77_06805;Dbxref=NCBI_GP:PDP49078.1;Name=PDP49078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964351.1;locus_tag=CLI77_06805;product=PaaI family thioesterase;protein_id=PDP49078.1;transl_table=11 ##sequence-region NSLS01000021.1 1 42982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000021.1 Genbank region 1 42982 . + . ID=NSLS01000021.1:1..42982;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000021.1 Genbank gene 1 628 . + . ID=gene-CLI77_06810;Name=CLI77_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06810;partial=true;start_range=.,1 NSLS01000021.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP49007.1;Parent=gene-CLI77_06810;Dbxref=NCBI_GP:PDP49007.1;Name=PDP49007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_06810;partial=true;product=IS3 family transposase;protein_id=PDP49007.1;start_range=.,1;transl_table=11 NSLS01000021.1 Genbank gene 915 2723 . - . ID=gene-CLI77_06815;Name=CLI77_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06815 NSLS01000021.1 Protein Homology CDS 915 2723 . - 0 ID=cds-PDP49008.1;Parent=gene-CLI77_06815;Dbxref=NCBI_GP:PDP49008.1;Name=PDP49008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816583.1;locus_tag=CLI77_06815;product=DNA polymerase III subunit gamma/tau;protein_id=PDP49008.1;transl_table=11 NSLS01000021.1 Genbank gene 2846 4492 . - . ID=gene-CLI77_06820;Name=CLI77_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06820 NSLS01000021.1 Protein Homology CDS 2846 4492 . - 0 ID=cds-PDP49009.1;Parent=gene-CLI77_06820;Dbxref=NCBI_GP:PDP49009.1;Name=PDP49009.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873410.1;locus_tag=CLI77_06820;product=fumarate hydratase;protein_id=PDP49009.1;transl_table=11 NSLS01000021.1 Genbank gene 4565 4795 . - . ID=gene-CLI77_06825;Name=CLI77_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06825 NSLS01000021.1 Protein Homology CDS 4565 4795 . - 0 ID=cds-PDP49010.1;Parent=gene-CLI77_06825;Dbxref=NCBI_GP:PDP49010.1;Name=PDP49010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14375.4;locus_tag=CLI77_06825;product=hypothetical protein;protein_id=PDP49010.1;transl_table=11 NSLS01000021.1 Genbank gene 4792 5733 . - . ID=gene-CLI77_06830;Name=CLI77_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06830 NSLS01000021.1 Protein Homology CDS 4792 5733 . - 0 ID=cds-PDP49011.1;Parent=gene-CLI77_06830;Dbxref=NCBI_GP:PDP49011.1;Name=PDP49011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816585.1;locus_tag=CLI77_06830;product=nitronate monooxygenase;protein_id=PDP49011.1;transl_table=11 NSLS01000021.1 Genbank gene 6168 8771 . - . ID=gene-CLI77_06835;Name=CLI77_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06835 NSLS01000021.1 Protein Homology CDS 6168 8771 . - 0 ID=cds-PDP49012.1;Parent=gene-CLI77_06835;Dbxref=NCBI_GP:PDP49012.1;Name=PDP49012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457856.1;locus_tag=CLI77_06835;product=TonB-dependent receptor;protein_id=PDP49012.1;transl_table=11 NSLS01000021.1 Genbank gene 9310 9489 . + . ID=gene-CLI77_06840;Name=CLI77_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06840 NSLS01000021.1 Protein Homology CDS 9310 9489 . + 0 ID=cds-PDP49037.1;Parent=gene-CLI77_06840;Dbxref=NCBI_GP:PDP49037.1;Name=PDP49037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815497.1;locus_tag=CLI77_06840;product=hypothetical protein;protein_id=PDP49037.1;transl_table=11 NSLS01000021.1 cmsearch riboswitch 9943 10155 . + . ID=id-NSLS01000021.1:9943..10155;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000021.1 Genbank gene 10675 12360 . + . ID=gene-CLI77_06845;Name=CLI77_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06845 NSLS01000021.1 Protein Homology CDS 10675 12360 . + 0 ID=cds-PDP49013.1;Parent=gene-CLI77_06845;Dbxref=NCBI_GP:PDP49013.1;Name=PDP49013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873387.1;locus_tag=CLI77_06845;product=transporter;protein_id=PDP49013.1;transl_table=11 NSLS01000021.1 Genbank gene 12576 12968 . + . ID=gene-CLI77_06850;Name=CLI77_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06850 NSLS01000021.1 Protein Homology CDS 12576 12968 . + 0 ID=cds-PDP49014.1;Parent=gene-CLI77_06850;Dbxref=NCBI_GP:PDP49014.1;Name=PDP49014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873383.1;locus_tag=CLI77_06850;product=hypothetical protein;protein_id=PDP49014.1;transl_table=11 NSLS01000021.1 Genbank gene 12965 13930 . - . ID=gene-CLI77_06855;Name=CLI77_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06855 NSLS01000021.1 Protein Homology CDS 12965 13930 . - 0 ID=cds-PDP49015.1;Parent=gene-CLI77_06855;Dbxref=NCBI_GP:PDP49015.1;Name=PDP49015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873381.1;locus_tag=CLI77_06855;product=cation transporter;protein_id=PDP49015.1;transl_table=11 NSLS01000021.1 Genbank gene 14193 14729 . + . ID=gene-CLI77_06860;Name=CLI77_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06860 NSLS01000021.1 Protein Homology CDS 14193 14729 . + 0 ID=cds-PDP49016.1;Parent=gene-CLI77_06860;Dbxref=NCBI_GP:PDP49016.1;Name=PDP49016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956306.1;locus_tag=CLI77_06860;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=PDP49016.1;transl_table=11 NSLS01000021.1 Genbank pseudogene 14804 15022 . - . ID=gene-CLI77_06865;Name=CLI77_06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06865;pseudo=true NSLS01000021.1 Protein Homology CDS 14804 15022 . - 0 ID=cds-CLI77_06865;Parent=gene-CLI77_06865;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815676.1;locus_tag=CLI77_06865;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000021.1 Genbank gene 15225 18080 . + . ID=gene-CLI77_06870;Name=CLI77_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06870 NSLS01000021.1 Protein Homology CDS 15225 18080 . + 0 ID=cds-PDP49017.1;Parent=gene-CLI77_06870;Dbxref=NCBI_GP:PDP49017.1;Name=PDP49017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457851.1;locus_tag=CLI77_06870;product=kinase;protein_id=PDP49017.1;transl_table=11 NSLS01000021.1 Genbank gene 18107 18823 . + . ID=gene-CLI77_06875;Name=CLI77_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06875 NSLS01000021.1 Protein Homology CDS 18107 18823 . + 0 ID=cds-PDP49018.1;Parent=gene-CLI77_06875;Dbxref=NCBI_GP:PDP49018.1;Name=PDP49018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585445.1;locus_tag=CLI77_06875;product=DUF1751 domain-containing protein;protein_id=PDP49018.1;transl_table=11 NSLS01000021.1 Genbank gene 18807 19721 . + . ID=gene-CLI77_06880;Name=CLI77_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06880 NSLS01000021.1 Protein Homology CDS 18807 19721 . + 0 ID=cds-PDP49019.1;Parent=gene-CLI77_06880;Dbxref=NCBI_GP:PDP49019.1;Name=PDP49019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585446.1;locus_tag=CLI77_06880;product=rhomboid family intramembrane serine protease;protein_id=PDP49019.1;transl_table=11 NSLS01000021.1 Genbank gene 19718 20863 . + . ID=gene-CLI77_06885;Name=CLI77_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06885 NSLS01000021.1 Protein Homology CDS 19718 20863 . + 0 ID=cds-PDP49020.1;Parent=gene-CLI77_06885;Dbxref=NCBI_GP:PDP49020.1;Name=PDP49020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585447.1;locus_tag=CLI77_06885;product=AP endonuclease;protein_id=PDP49020.1;transl_table=11 NSLS01000021.1 Genbank gene 21116 22495 . + . ID=gene-CLI77_06890;Name=CLI77_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06890 NSLS01000021.1 Protein Homology CDS 21116 22495 . + 0 ID=cds-PDP49021.1;Parent=gene-CLI77_06890;Dbxref=NCBI_GP:PDP49021.1;Name=PDP49021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013612047.1;locus_tag=CLI77_06890;product=tyrosine phenol-lyase;protein_id=PDP49021.1;transl_table=11 NSLS01000021.1 Genbank gene 22757 23191 . - . ID=gene-CLI77_06895;Name=CLI77_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06895 NSLS01000021.1 Protein Homology CDS 22757 23191 . - 0 ID=cds-PDP49022.1;Parent=gene-CLI77_06895;Dbxref=NCBI_GP:PDP49022.1;Name=PDP49022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956260.1;locus_tag=CLI77_06895;product=hypothetical protein;protein_id=PDP49022.1;transl_table=11 NSLS01000021.1 Genbank gene 23455 24981 . + . ID=gene-CLI77_06900;Name=CLI77_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06900 NSLS01000021.1 Protein Homology CDS 23455 24981 . + 0 ID=cds-PDP49023.1;Parent=gene-CLI77_06900;Dbxref=NCBI_GP:PDP49023.1;Name=PDP49023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585449.1;locus_tag=CLI77_06900;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=PDP49023.1;transl_table=11 NSLS01000021.1 Genbank gene 25084 26103 . + . ID=gene-CLI77_06905;Name=CLI77_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06905 NSLS01000021.1 Protein Homology CDS 25084 26103 . + 0 ID=cds-PDP49024.1;Parent=gene-CLI77_06905;Dbxref=NCBI_GP:PDP49024.1;Name=PDP49024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585450.1;locus_tag=CLI77_06905;product=rod shape-determining protein;protein_id=PDP49024.1;transl_table=11 NSLS01000021.1 Genbank gene 26141 27028 . + . ID=gene-CLI77_06910;Name=CLI77_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06910 NSLS01000021.1 Protein Homology CDS 26141 27028 . + 0 ID=cds-PDP49025.1;Parent=gene-CLI77_06910;Dbxref=NCBI_GP:PDP49025.1;Name=PDP49025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965536.1;locus_tag=CLI77_06910;product=rod shape-determining protein MreC;protein_id=PDP49025.1;transl_table=11 NSLS01000021.1 Genbank gene 27028 27546 . + . ID=gene-CLI77_06915;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CLI77_06915 NSLS01000021.1 Protein Homology CDS 27028 27546 . + 0 ID=cds-PDP49026.1;Parent=gene-CLI77_06915;Dbxref=NCBI_GP:PDP49026.1;Name=PDP49026.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965537.1;locus_tag=CLI77_06915;product=rod shape-determining protein MreD;protein_id=PDP49026.1;transl_table=11 NSLS01000021.1 Genbank gene 27539 29404 . + . ID=gene-CLI77_06920;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CLI77_06920 NSLS01000021.1 Protein Homology CDS 27539 29404 . + 0 ID=cds-PDP49027.1;Parent=gene-CLI77_06920;Dbxref=NCBI_GP:PDP49027.1;Name=PDP49027.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965538.1;locus_tag=CLI77_06920;product=penicillin-binding protein 2;protein_id=PDP49027.1;transl_table=11 NSLS01000021.1 Genbank gene 29394 30851 . + . ID=gene-CLI77_06925;Name=CLI77_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06925 NSLS01000021.1 Protein Homology CDS 29394 30851 . + 0 ID=cds-PDP49028.1;Parent=gene-CLI77_06925;Dbxref=NCBI_GP:PDP49028.1;Name=PDP49028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457839.1;locus_tag=CLI77_06925;product=rod shape-determining protein RodA;protein_id=PDP49028.1;transl_table=11 NSLS01000021.1 Genbank gene 30879 32090 . - . ID=gene-CLI77_06930;Name=CLI77_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06930 NSLS01000021.1 Protein Homology CDS 30879 32090 . - 0 ID=cds-PDP49029.1;Parent=gene-CLI77_06930;Dbxref=NCBI_GP:PDP49029.1;Name=PDP49029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873527.1;locus_tag=CLI77_06930;product=hypothetical protein;protein_id=PDP49029.1;transl_table=11 NSLS01000021.1 Genbank pseudogene 32451 32669 . + . ID=gene-CLI77_06935;Name=CLI77_06935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06935;pseudo=true NSLS01000021.1 Protein Homology CDS 32451 32669 . + 0 ID=cds-CLI77_06935;Parent=gene-CLI77_06935;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI77_06935;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000021.1 Genbank gene 32666 33124 . + . ID=gene-CLI77_06940;Name=CLI77_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06940 NSLS01000021.1 Protein Homology CDS 32666 33124 . + 0 ID=cds-PDP49030.1;Parent=gene-CLI77_06940;Dbxref=NCBI_GP:PDP49030.1;Name=PDP49030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816610.1;locus_tag=CLI77_06940;product=histidinol phosphate aminotransferase;protein_id=PDP49030.1;transl_table=11 NSLS01000021.1 Genbank gene 33189 33899 . + . ID=gene-CLI77_06945;Name=CLI77_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06945 NSLS01000021.1 Protein Homology CDS 33189 33899 . + 0 ID=cds-PDP49031.1;Parent=gene-CLI77_06945;Dbxref=NCBI_GP:PDP49031.1;Name=PDP49031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457842.1;locus_tag=CLI77_06945;product=DUF3256 domain-containing protein;protein_id=PDP49031.1;transl_table=11 NSLS01000021.1 Genbank gene 33936 34862 . + . ID=gene-CLI77_06950;Name=CLI77_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06950 NSLS01000021.1 Protein Homology CDS 33936 34862 . + 0 ID=cds-PDP49032.1;Parent=gene-CLI77_06950;Dbxref=NCBI_GP:PDP49032.1;Name=PDP49032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965543.1;locus_tag=CLI77_06950;product=hypothetical protein;protein_id=PDP49032.1;transl_table=11 NSLS01000021.1 Genbank gene 35046 37625 . + . ID=gene-CLI77_06955;Name=CLI77_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06955 NSLS01000021.1 Protein Homology CDS 35046 37625 . + 0 ID=cds-PDP49033.1;Parent=gene-CLI77_06955;Dbxref=NCBI_GP:PDP49033.1;Name=PDP49033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585460.1;locus_tag=CLI77_06955;product=DNA gyrase subunit A;protein_id=PDP49033.1;transl_table=11 NSLS01000021.1 Genbank gene 37659 38861 . + . ID=gene-CLI77_06960;Name=CLI77_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06960 NSLS01000021.1 Protein Homology CDS 37659 38861 . + 0 ID=cds-PDP49034.1;Parent=gene-CLI77_06960;Dbxref=NCBI_GP:PDP49034.1;Name=PDP49034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965545.1;locus_tag=CLI77_06960;product=hypothetical protein;protein_id=PDP49034.1;transl_table=11 NSLS01000021.1 Genbank gene 39219 39428 . + . ID=gene-CLI77_06965;Name=CLI77_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06965 NSLS01000021.1 Protein Homology CDS 39219 39428 . + 0 ID=cds-PDP49035.1;Parent=gene-CLI77_06965;Dbxref=NCBI_GP:PDP49035.1;Name=PDP49035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019036496.1;locus_tag=CLI77_06965;product=XRE family transcriptional regulator;protein_id=PDP49035.1;transl_table=11 NSLS01000021.1 Genbank gene 39453 42350 . + . ID=gene-CLI77_06970;Name=CLI77_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06970 NSLS01000021.1 Protein Homology CDS 39453 42350 . + 0 ID=cds-PDP49036.1;Parent=gene-CLI77_06970;Dbxref=NCBI_GP:PDP49036.1;Name=PDP49036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816616.1;locus_tag=CLI77_06970;product=helicase SNF2;protein_id=PDP49036.1;transl_table=11 NSLS01000021.1 Genbank pseudogene 42446 42793 . + . ID=gene-CLI77_06975;Name=CLI77_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_06975;pseudo=true NSLS01000021.1 Protein Homology CDS 42446 42793 . + 0 ID=cds-CLI77_06975;Parent=gene-CLI77_06975;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457847.1;locus_tag=CLI77_06975;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000022.1 1 36197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000022.1 Genbank region 1 36197 . + . ID=NSLS01000022.1:1..36197;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000022.1 Genbank gene 1 628 . + . ID=gene-CLI77_06980;Name=CLI77_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06980;partial=true;start_range=.,1 NSLS01000022.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48968.1;Parent=gene-CLI77_06980;Dbxref=NCBI_GP:PDP48968.1;Name=PDP48968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_06980;partial=true;product=IS3 family transposase;protein_id=PDP48968.1;start_range=.,1;transl_table=11 NSLS01000022.1 Genbank gene 958 2976 . - . ID=gene-CLI77_06985;Name=CLI77_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06985 NSLS01000022.1 Protein Homology CDS 958 2976 . - 0 ID=cds-PDP48969.1;Parent=gene-CLI77_06985;Dbxref=NCBI_GP:PDP48969.1;Name=PDP48969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873448.1;locus_tag=CLI77_06985;product=hypothetical protein;protein_id=PDP48969.1;transl_table=11 NSLS01000022.1 Genbank gene 2998 3591 . - . ID=gene-CLI77_06990;Name=CLI77_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06990 NSLS01000022.1 Protein Homology CDS 2998 3591 . - 0 ID=cds-PDP48970.1;Parent=gene-CLI77_06990;Dbxref=NCBI_GP:PDP48970.1;Name=PDP48970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584291.1;locus_tag=CLI77_06990;product=radical SAM protein;protein_id=PDP48970.1;transl_table=11 NSLS01000022.1 Genbank gene 3611 4030 . - . ID=gene-CLI77_06995;Name=CLI77_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_06995 NSLS01000022.1 Protein Homology CDS 3611 4030 . - 0 ID=cds-PDP48971.1;Parent=gene-CLI77_06995;Dbxref=NCBI_GP:PDP48971.1;Name=PDP48971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364760.1;locus_tag=CLI77_06995;product=6-carboxytetrahydropterin synthase;protein_id=PDP48971.1;transl_table=11 NSLS01000022.1 Genbank gene 4413 5858 . + . ID=gene-CLI77_07000;Name=CLI77_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07000 NSLS01000022.1 Protein Homology CDS 4413 5858 . + 0 ID=cds-PDP48972.1;Parent=gene-CLI77_07000;Dbxref=NCBI_GP:PDP48972.1;Name=PDP48972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873455.1;locus_tag=CLI77_07000;product=thiol protease;protein_id=PDP48972.1;transl_table=11 NSLS01000022.1 Genbank gene 6325 7011 . - . ID=gene-CLI77_07005;Name=CLI77_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07005 NSLS01000022.1 Protein Homology CDS 6325 7011 . - 0 ID=cds-PDP48973.1;Parent=gene-CLI77_07005;Dbxref=NCBI_GP:PDP48973.1;Name=PDP48973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815796.1;locus_tag=CLI77_07005;product=Crp/Fnr family transcriptional regulator;protein_id=PDP48973.1;transl_table=11 NSLS01000022.1 Genbank gene 7028 7384 . - . ID=gene-CLI77_07010;Name=CLI77_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07010 NSLS01000022.1 Protein Homology CDS 7028 7384 . - 0 ID=cds-PDP48974.1;Parent=gene-CLI77_07010;Dbxref=NCBI_GP:PDP48974.1;Name=PDP48974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815795.1;locus_tag=CLI77_07010;product=transcriptional regulator;protein_id=PDP48974.1;transl_table=11 NSLS01000022.1 Genbank gene 7449 8864 . - . ID=gene-CLI77_07015;Name=CLI77_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07015 NSLS01000022.1 Protein Homology CDS 7449 8864 . - 0 ID=cds-PDP48975.1;Parent=gene-CLI77_07015;Dbxref=NCBI_GP:PDP48975.1;Name=PDP48975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584285.1;locus_tag=CLI77_07015;product=ligase;protein_id=PDP48975.1;transl_table=11 NSLS01000022.1 Genbank gene 8906 9793 . - . ID=gene-CLI77_07020;Name=CLI77_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07020 NSLS01000022.1 Protein Homology CDS 8906 9793 . - 0 ID=cds-PDP48976.1;Parent=gene-CLI77_07020;Dbxref=NCBI_GP:PDP48976.1;Name=PDP48976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458166.1;locus_tag=CLI77_07020;product=hypothetical protein;protein_id=PDP48976.1;transl_table=11 NSLS01000022.1 Genbank gene 9809 10687 . - . ID=gene-CLI77_07025;Name=CLI77_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07025 NSLS01000022.1 Protein Homology CDS 9809 10687 . - 0 ID=cds-PDP48977.1;Parent=gene-CLI77_07025;Dbxref=NCBI_GP:PDP48977.1;Name=PDP48977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584283.1;locus_tag=CLI77_07025;product=MCE family protein;protein_id=PDP48977.1;transl_table=11 NSLS01000022.1 Genbank gene 10728 11918 . - . ID=gene-CLI77_07030;Name=CLI77_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07030 NSLS01000022.1 Protein Homology CDS 10728 11918 . - 0 ID=cds-PDP48978.1;Parent=gene-CLI77_07030;Dbxref=NCBI_GP:PDP48978.1;Name=PDP48978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956195.1;locus_tag=CLI77_07030;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP48978.1;transl_table=11 NSLS01000022.1 Genbank gene 12111 12187 . - . ID=gene-CLI77_07035;Name=CLI77_07035;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_07035 NSLS01000022.1 tRNAscan-SE tRNA 12111 12187 . - . ID=rna-CLI77_07035;Parent=gene-CLI77_07035;anticodon=(pos:complement(12151..12153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07035;product=tRNA-Thr NSLS01000022.1 tRNAscan-SE exon 12111 12187 . - . ID=exon-CLI77_07035-1;Parent=rna-CLI77_07035;anticodon=(pos:complement(12151..12153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07035;product=tRNA-Thr NSLS01000022.1 Genbank gene 12506 12709 . - . ID=gene-CLI77_07040;Name=CLI77_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07040 NSLS01000022.1 Protein Homology CDS 12506 12709 . - 0 ID=cds-PDP48979.1;Parent=gene-CLI77_07040;Dbxref=NCBI_GP:PDP48979.1;Name=PDP48979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815790.1;locus_tag=CLI77_07040;product=hypothetical protein;protein_id=PDP48979.1;transl_table=11 NSLS01000022.1 Genbank gene 13011 13217 . - . ID=gene-CLI77_07045;Name=CLI77_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07045 NSLS01000022.1 Protein Homology CDS 13011 13217 . - 0 ID=cds-PDP48980.1;Parent=gene-CLI77_07045;Dbxref=NCBI_GP:PDP48980.1;Name=PDP48980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815789.1;locus_tag=CLI77_07045;product=hypothetical protein;protein_id=PDP48980.1;transl_table=11 NSLS01000022.1 Genbank gene 13264 14196 . + . ID=gene-CLI77_07050;Name=CLI77_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07050 NSLS01000022.1 Protein Homology CDS 13264 14196 . + 0 ID=cds-PDP48981.1;Parent=gene-CLI77_07050;Dbxref=NCBI_GP:PDP48981.1;Name=PDP48981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584281.1;locus_tag=CLI77_07050;product=DNA-binding protein;protein_id=PDP48981.1;transl_table=11 NSLS01000022.1 Genbank gene 14233 16407 . + . ID=gene-CLI77_07055;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CLI77_07055 NSLS01000022.1 Protein Homology CDS 14233 16407 . + 0 ID=cds-PDP48995.1;Parent=gene-CLI77_07055;Dbxref=NCBI_GP:PDP48995.1;Name=PDP48995.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458171.1;locus_tag=CLI77_07055;product=ferrous iron transport protein B;protein_id=PDP48995.1;transl_table=11 NSLS01000022.1 Genbank gene 16444 18090 . + . ID=gene-CLI77_07060;Name=CLI77_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07060 NSLS01000022.1 Protein Homology CDS 16444 18090 . + 0 ID=cds-PDP48982.1;Parent=gene-CLI77_07060;Dbxref=NCBI_GP:PDP48982.1;Name=PDP48982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584279.1;locus_tag=CLI77_07060;product=glycogen synthase;protein_id=PDP48982.1;transl_table=11 NSLS01000022.1 Genbank gene 18159 19112 . + . ID=gene-CLI77_07065;Name=CLI77_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07065 NSLS01000022.1 Protein Homology CDS 18159 19112 . + 0 ID=cds-PDP48983.1;Parent=gene-CLI77_07065;Dbxref=NCBI_GP:PDP48983.1;Name=PDP48983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584278.1;locus_tag=CLI77_07065;product=sodium:proton exchanger;protein_id=PDP48983.1;transl_table=11 NSLS01000022.1 Genbank gene 19133 19597 . + . ID=gene-CLI77_07070;Name=CLI77_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07070 NSLS01000022.1 Protein Homology CDS 19133 19597 . + 0 ID=cds-PDP48984.1;Parent=gene-CLI77_07070;Dbxref=NCBI_GP:PDP48984.1;Name=PDP48984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584277.1;locus_tag=CLI77_07070;product=transcriptional regulator;protein_id=PDP48984.1;transl_table=11 NSLS01000022.1 Genbank gene 20031 21758 . + . ID=gene-CLI77_07075;Name=CLI77_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07075 NSLS01000022.1 Protein Homology CDS 20031 21758 . + 0 ID=cds-PDP48985.1;Parent=gene-CLI77_07075;Dbxref=NCBI_GP:PDP48985.1;Name=PDP48985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458174.1;locus_tag=CLI77_07075;product=arylsulfatase;protein_id=PDP48985.1;transl_table=11 NSLS01000022.1 Genbank gene 21992 24289 . - . ID=gene-CLI77_07080;Name=CLI77_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07080 NSLS01000022.1 Protein Homology CDS 21992 24289 . - 0 ID=cds-PDP48986.1;Parent=gene-CLI77_07080;Dbxref=NCBI_GP:PDP48986.1;Name=PDP48986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873452.1;locus_tag=CLI77_07080;product=ATP-dependent DNA helicase;protein_id=PDP48986.1;transl_table=11 NSLS01000022.1 Genbank gene 24289 25668 . - . ID=gene-CLI77_07085;Name=CLI77_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07085 NSLS01000022.1 Protein Homology CDS 24289 25668 . - 0 ID=cds-PDP48987.1;Parent=gene-CLI77_07085;Dbxref=NCBI_GP:PDP48987.1;Name=PDP48987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584273.1;locus_tag=CLI77_07085;product=SWIM zinc finger family protein;protein_id=PDP48987.1;transl_table=11 NSLS01000022.1 Genbank gene 25694 28597 . - . ID=gene-CLI77_07090;Name=CLI77_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07090 NSLS01000022.1 Protein Homology CDS 25694 28597 . - 0 ID=cds-PDP48988.1;Parent=gene-CLI77_07090;Dbxref=NCBI_GP:PDP48988.1;Name=PDP48988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815782.1;locus_tag=CLI77_07090;product=excinuclease ABC subunit A;protein_id=PDP48988.1;transl_table=11 NSLS01000022.1 Genbank gene 28668 30053 . - . ID=gene-CLI77_07095;Name=CLI77_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07095 NSLS01000022.1 Protein Homology CDS 28668 30053 . - 0 ID=cds-PDP48989.1;Parent=gene-CLI77_07095;Dbxref=NCBI_GP:PDP48989.1;Name=PDP48989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873451.1;locus_tag=CLI77_07095;product=gliding motility protein;protein_id=PDP48989.1;transl_table=11 NSLS01000022.1 Genbank gene 30148 30882 . - . ID=gene-CLI77_07100;Name=CLI77_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07100 NSLS01000022.1 Protein Homology CDS 30148 30882 . - 0 ID=cds-PDP48990.1;Parent=gene-CLI77_07100;Dbxref=NCBI_GP:PDP48990.1;Name=PDP48990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815780.1;locus_tag=CLI77_07100;product=ABC transporter ATP-binding protein;protein_id=PDP48990.1;transl_table=11 NSLS01000022.1 Genbank gene 30901 31647 . - . ID=gene-CLI77_07105;Name=CLI77_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07105 NSLS01000022.1 Protein Homology CDS 30901 31647 . - 0 ID=cds-PDP48991.1;Parent=gene-CLI77_07105;Dbxref=NCBI_GP:PDP48991.1;Name=PDP48991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965389.1;locus_tag=CLI77_07105;product=permease;protein_id=PDP48991.1;transl_table=11 NSLS01000022.1 Genbank gene 31885 33225 . - . ID=gene-CLI77_07110;Name=CLI77_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07110 NSLS01000022.1 Protein Homology CDS 31885 33225 . - 0 ID=cds-PDP48992.1;Parent=gene-CLI77_07110;Dbxref=NCBI_GP:PDP48992.1;Name=PDP48992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874101.1;locus_tag=CLI77_07110;product=secretion protein;protein_id=PDP48992.1;transl_table=11 NSLS01000022.1 Genbank gene 33609 35306 . - . ID=gene-CLI77_07115;Name=CLI77_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07115 NSLS01000022.1 Protein Homology CDS 33609 35306 . - 0 ID=cds-PDP48993.1;Parent=gene-CLI77_07115;Dbxref=NCBI_GP:PDP48993.1;Name=PDP48993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815778.1;locus_tag=CLI77_07115;product=hypothetical protein;protein_id=PDP48993.1;transl_table=11 NSLS01000022.1 Genbank pseudogene 35715 36068 . - . ID=gene-CLI77_07120;Name=CLI77_07120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07120;pseudo=true NSLS01000022.1 Protein Homology CDS 35715 36068 . - 0 ID=cds-CLI77_07120;Parent=gene-CLI77_07120;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584264.1;locus_tag=CLI77_07120;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000022.1 Genbank gene 36084 36197 . - . ID=gene-CLI77_07125;Name=CLI77_07125;end_range=36197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07125;partial=true NSLS01000022.1 Protein Homology CDS 36084 36197 . - 0 ID=cds-PDP48994.1;Parent=gene-CLI77_07125;Dbxref=NCBI_GP:PDP48994.1;Name=PDP48994.1;end_range=36197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI77_07125;partial=true;product=ISAs1 family transposase;protein_id=PDP48994.1;transl_table=11 ##sequence-region NSLS01000023.1 1 32547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000023.1 Genbank region 1 32547 . + . ID=NSLS01000023.1:1..32547;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000023.1 Genbank gene 1 628 . + . ID=gene-CLI77_07130;Name=CLI77_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07130;partial=true;start_range=.,1 NSLS01000023.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48922.1;Parent=gene-CLI77_07130;Dbxref=NCBI_GP:PDP48922.1;Name=PDP48922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_07130;partial=true;product=IS3 family transposase;protein_id=PDP48922.1;start_range=.,1;transl_table=11 NSLS01000023.1 Genbank gene 927 2363 . - . ID=gene-CLI77_07135;Name=CLI77_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07135 NSLS01000023.1 Protein Homology CDS 927 2363 . - 0 ID=cds-PDP48923.1;Parent=gene-CLI77_07135;Dbxref=NCBI_GP:PDP48923.1;Name=PDP48923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458090.1;locus_tag=CLI77_07135;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=PDP48923.1;transl_table=11 NSLS01000023.1 Genbank gene 2408 3796 . - . ID=gene-CLI77_07140;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CLI77_07140 NSLS01000023.1 Protein Homology CDS 2408 3796 . - 0 ID=cds-PDP48924.1;Parent=gene-CLI77_07140;Dbxref=NCBI_GP:PDP48924.1;Name=PDP48924.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815906.1;locus_tag=CLI77_07140;product=phosphoglucosamine mutase;protein_id=PDP48924.1;transl_table=11 NSLS01000023.1 Genbank gene 3850 4446 . - . ID=gene-CLI77_07145;Name=CLI77_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07145 NSLS01000023.1 Protein Homology CDS 3850 4446 . - 0 ID=cds-PDP48925.1;Parent=gene-CLI77_07145;Dbxref=NCBI_GP:PDP48925.1;Name=PDP48925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964366.1;locus_tag=CLI77_07145;product=DUF4827 domain-containing protein;protein_id=PDP48925.1;transl_table=11 NSLS01000023.1 Genbank gene 4539 5582 . - . ID=gene-CLI77_07150;Name=CLI77_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07150 NSLS01000023.1 Protein Homology CDS 4539 5582 . - 0 ID=cds-PDP48926.1;Parent=gene-CLI77_07150;Dbxref=NCBI_GP:PDP48926.1;Name=PDP48926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815908.1;locus_tag=CLI77_07150;product=phosphoesterase;protein_id=PDP48926.1;transl_table=11 NSLS01000023.1 Genbank gene 5536 5772 . - . ID=gene-CLI77_07155;Name=CLI77_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07155 NSLS01000023.1 Protein Homology CDS 5536 5772 . - 0 ID=cds-PDP48927.1;Parent=gene-CLI77_07155;Dbxref=NCBI_GP:PDP48927.1;Name=PDP48927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584436.1;locus_tag=CLI77_07155;product=hypothetical protein;protein_id=PDP48927.1;transl_table=11 NSLS01000023.1 Genbank gene 6341 7078 . + . ID=gene-CLI77_07160;Name=CLI77_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07160 NSLS01000023.1 Protein Homology CDS 6341 7078 . + 0 ID=cds-PDP48928.1;Parent=gene-CLI77_07160;Dbxref=NCBI_GP:PDP48928.1;Name=PDP48928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584437.1;locus_tag=CLI77_07160;product=DNA-binding response regulator;protein_id=PDP48928.1;transl_table=11 NSLS01000023.1 Genbank gene 7195 7758 . + . ID=gene-CLI77_07165;Name=CLI77_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07165 NSLS01000023.1 Protein Homology CDS 7195 7758 . + 0 ID=cds-PDP48929.1;Parent=gene-CLI77_07165;Dbxref=NCBI_GP:PDP48929.1;Name=PDP48929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584438.1;locus_tag=CLI77_07165;product=GNAT family N-acetyltransferase;protein_id=PDP48929.1;transl_table=11 NSLS01000023.1 Genbank gene 7810 8745 . - . ID=gene-CLI77_07170;Name=CLI77_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07170 NSLS01000023.1 Protein Homology CDS 7810 8745 . - 0 ID=cds-PDP48930.1;Parent=gene-CLI77_07170;Dbxref=NCBI_GP:PDP48930.1;Name=PDP48930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873665.1;locus_tag=CLI77_07170;product=TIGR01212 family radical SAM protein;protein_id=PDP48930.1;transl_table=11 NSLS01000023.1 Genbank gene 9099 9347 . - . ID=gene-CLI77_07175;Name=CLI77_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07175 NSLS01000023.1 Protein Homology CDS 9099 9347 . - 0 ID=cds-PDP48931.1;Parent=gene-CLI77_07175;Dbxref=NCBI_GP:PDP48931.1;Name=PDP48931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964892.1;locus_tag=CLI77_07175;product=hypothetical protein;protein_id=PDP48931.1;transl_table=11 NSLS01000023.1 Genbank gene 9616 10719 . + . ID=gene-CLI77_07180;Name=CLI77_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07180 NSLS01000023.1 Protein Homology CDS 9616 10719 . + 0 ID=cds-PDP48932.1;Parent=gene-CLI77_07180;Dbxref=NCBI_GP:PDP48932.1;Name=PDP48932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873697.1;locus_tag=CLI77_07180;product=thioredoxin;protein_id=PDP48932.1;transl_table=11 NSLS01000023.1 Genbank gene 10860 11708 . + . ID=gene-CLI77_07185;Name=CLI77_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07185 NSLS01000023.1 Protein Homology CDS 10860 11708 . + 0 ID=cds-PDP48933.1;Parent=gene-CLI77_07185;Dbxref=NCBI_GP:PDP48933.1;Name=PDP48933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584442.1;locus_tag=CLI77_07185;product=DUF3108 domain-containing protein;protein_id=PDP48933.1;transl_table=11 NSLS01000023.1 Genbank gene 11919 12929 . + . ID=gene-CLI77_07190;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CLI77_07190 NSLS01000023.1 Protein Homology CDS 11919 12929 . + 0 ID=cds-PDP48934.1;Parent=gene-CLI77_07190;Dbxref=NCBI_GP:PDP48934.1;Name=PDP48934.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964889.1;locus_tag=CLI77_07190;product=phosphate acetyltransferase;protein_id=PDP48934.1;transl_table=11 NSLS01000023.1 Genbank gene 12975 14171 . + . ID=gene-CLI77_07195;Name=CLI77_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07195 NSLS01000023.1 Protein Homology CDS 12975 14171 . + 0 ID=cds-PDP48935.1;Parent=gene-CLI77_07195;Dbxref=NCBI_GP:PDP48935.1;Name=PDP48935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458083.1;locus_tag=CLI77_07195;product=acetate kinase;protein_id=PDP48935.1;transl_table=11 NSLS01000023.1 Genbank gene 14341 15186 . - . ID=gene-CLI77_07200;Name=CLI77_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07200 NSLS01000023.1 Protein Homology CDS 14341 15186 . - 0 ID=cds-PDP48936.1;Parent=gene-CLI77_07200;Dbxref=NCBI_GP:PDP48936.1;Name=PDP48936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873698.1;locus_tag=CLI77_07200;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=PDP48936.1;transl_table=11 NSLS01000023.1 Genbank gene 15233 16003 . - . ID=gene-CLI77_07205;Name=CLI77_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07205 NSLS01000023.1 Protein Homology CDS 15233 16003 . - 0 ID=cds-PDP48937.1;Parent=gene-CLI77_07205;Dbxref=NCBI_GP:PDP48937.1;Name=PDP48937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613329.1;locus_tag=CLI77_07205;product=enoyl-CoA hydratase;protein_id=PDP48937.1;transl_table=11 NSLS01000023.1 Genbank gene 16107 17114 . - . ID=gene-CLI77_07210;Name=CLI77_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07210 NSLS01000023.1 Protein Homology CDS 16107 17114 . - 0 ID=cds-PDP48938.1;Parent=gene-CLI77_07210;Dbxref=NCBI_GP:PDP48938.1;Name=PDP48938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964623.1;locus_tag=CLI77_07210;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=PDP48938.1;transl_table=11 NSLS01000023.1 Genbank gene 17128 17913 . - . ID=gene-CLI77_07215;Name=CLI77_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07215 NSLS01000023.1 Protein Homology CDS 17128 17913 . - 0 ID=cds-PDP48939.1;Parent=gene-CLI77_07215;Dbxref=NCBI_GP:PDP48939.1;Name=PDP48939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364458.1;locus_tag=CLI77_07215;product=electron transfer flavoprotein subunit beta;protein_id=PDP48939.1;transl_table=11 NSLS01000023.1 Genbank gene 17928 19067 . - . ID=gene-CLI77_07220;Name=CLI77_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07220 NSLS01000023.1 Protein Homology CDS 17928 19067 . - 0 ID=cds-PDP48940.1;Parent=gene-CLI77_07220;Dbxref=NCBI_GP:PDP48940.1;Name=PDP48940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360059.1;locus_tag=CLI77_07220;product=acyl-CoA dehydrogenase;protein_id=PDP48940.1;transl_table=11 NSLS01000023.1 Genbank gene 19113 19775 . - . ID=gene-CLI77_07225;Name=CLI77_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07225 NSLS01000023.1 Protein Homology CDS 19113 19775 . - 0 ID=cds-PDP48941.1;Parent=gene-CLI77_07225;Dbxref=NCBI_GP:PDP48941.1;Name=PDP48941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360058.1;locus_tag=CLI77_07225;product=CoA transferase subunit B;protein_id=PDP48941.1;transl_table=11 NSLS01000023.1 Genbank gene 19798 20589 . - . ID=gene-CLI77_07230;Name=CLI77_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07230 NSLS01000023.1 Protein Homology CDS 19798 20589 . - 0 ID=cds-PDP48942.1;Parent=gene-CLI77_07230;Dbxref=NCBI_GP:PDP48942.1;Name=PDP48942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458078.1;locus_tag=CLI77_07230;product=hypothetical protein;protein_id=PDP48942.1;transl_table=11 NSLS01000023.1 Genbank gene 20586 22157 . - . ID=gene-CLI77_07235;Name=CLI77_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07235 NSLS01000023.1 Protein Homology CDS 20586 22157 . - 0 ID=cds-PDP48943.1;Parent=gene-CLI77_07235;Dbxref=NCBI_GP:PDP48943.1;Name=PDP48943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013760116.1;locus_tag=CLI77_07235;product=D-lysine 5%2C6-aminomutase subunit alpha;protein_id=PDP48943.1;transl_table=11 NSLS01000023.1 Genbank gene 22185 23582 . - . ID=gene-CLI77_07240;Name=CLI77_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07240 NSLS01000023.1 Protein Homology CDS 22185 23582 . - 0 ID=cds-PDP48944.1;Parent=gene-CLI77_07240;Dbxref=NCBI_GP:PDP48944.1;Name=PDP48944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964628.1;locus_tag=CLI77_07240;product=DNA mismatch repair protein MutS;protein_id=PDP48944.1;transl_table=11 NSLS01000023.1 Genbank gene 23576 24544 . - . ID=gene-CLI77_07245;Name=CLI77_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07245 NSLS01000023.1 Protein Homology CDS 23576 24544 . - 0 ID=cds-PDP48953.1;Parent=gene-CLI77_07245;Dbxref=NCBI_GP:PDP48953.1;Name=PDP48953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956201.1;locus_tag=CLI77_07245;product=hypothetical protein;protein_id=PDP48953.1;transl_table=11 NSLS01000023.1 Genbank gene 24674 25924 . - . ID=gene-CLI77_07250;Name=ablA;gbkey=Gene;gene=ablA;gene_biotype=protein_coding;locus_tag=CLI77_07250 NSLS01000023.1 Protein Homology CDS 24674 25924 . - 0 ID=cds-PDP48945.1;Parent=gene-CLI77_07250;Dbxref=NCBI_GP:PDP48945.1;Name=PDP48945.1;gbkey=CDS;gene=ablA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584456.1;locus_tag=CLI77_07250;product=lysine 2%2C3-aminomutase;protein_id=PDP48945.1;transl_table=11 NSLS01000023.1 Genbank gene 26011 27054 . - . ID=gene-CLI77_07255;Name=CLI77_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07255 NSLS01000023.1 Protein Homology CDS 26011 27054 . - 0 ID=cds-PDP48946.1;Parent=gene-CLI77_07255;Dbxref=NCBI_GP:PDP48946.1;Name=PDP48946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364489.1;locus_tag=CLI77_07255;product=L-erythro-3%2C5-diaminohexanoate dehydrogenase;protein_id=PDP48946.1;transl_table=11 NSLS01000023.1 Genbank gene 27096 27917 . - . ID=gene-CLI77_07260;Name=CLI77_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07260 NSLS01000023.1 Protein Homology CDS 27096 27917 . - 0 ID=cds-PDP48947.1;Parent=gene-CLI77_07260;Dbxref=NCBI_GP:PDP48947.1;Name=PDP48947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964631.1;locus_tag=CLI77_07260;product=3-keto-5-aminohexanoate cleavage protein;protein_id=PDP48947.1;transl_table=11 NSLS01000023.1 Genbank gene 27944 28333 . - . ID=gene-CLI77_07265;Name=CLI77_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07265 NSLS01000023.1 Protein Homology CDS 27944 28333 . - 0 ID=cds-PDP48948.1;Parent=gene-CLI77_07265;Dbxref=NCBI_GP:PDP48948.1;Name=PDP48948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956200.1;locus_tag=CLI77_07265;product=3-aminobutyryl-CoA ammonia lyase;protein_id=PDP48948.1;transl_table=11 NSLS01000023.1 Genbank gene 28387 29031 . - . ID=gene-CLI77_07270;Name=CLI77_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07270 NSLS01000023.1 Protein Homology CDS 28387 29031 . - 0 ID=cds-PDP48949.1;Parent=gene-CLI77_07270;Dbxref=NCBI_GP:PDP48949.1;Name=PDP48949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584460.1;locus_tag=CLI77_07270;product=CoA transferase subunit A;protein_id=PDP48949.1;transl_table=11 NSLS01000023.1 Genbank gene 29302 30225 . - . ID=gene-CLI77_07275;Name=CLI77_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07275 NSLS01000023.1 Protein Homology CDS 29302 30225 . - 0 ID=cds-PDP48950.1;Parent=gene-CLI77_07275;Dbxref=NCBI_GP:PDP48950.1;Name=PDP48950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956199.1;locus_tag=CLI77_07275;product=dihydroorotate dehydrogenase B catalytic subunit;protein_id=PDP48950.1;transl_table=11 NSLS01000023.1 Genbank gene 30207 31004 . - . ID=gene-CLI77_07280;Name=CLI77_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07280 NSLS01000023.1 Protein Homology CDS 30207 31004 . - 0 ID=cds-PDP48951.1;Parent=gene-CLI77_07280;Dbxref=NCBI_GP:PDP48951.1;Name=PDP48951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873635.1;locus_tag=CLI77_07280;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=PDP48951.1;transl_table=11 NSLS01000023.1 Genbank gene 31056 31496 . - . ID=gene-CLI77_07285;Name=CLI77_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07285 NSLS01000023.1 Protein Homology CDS 31056 31496 . - 0 ID=cds-PDP48952.1;Parent=gene-CLI77_07285;Dbxref=NCBI_GP:PDP48952.1;Name=PDP48952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964636.1;locus_tag=CLI77_07285;product=XRE family transcriptional regulator;protein_id=PDP48952.1;transl_table=11 ##sequence-region NSLS01000024.1 1 31429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000024.1 Genbank region 1 31429 . + . ID=NSLS01000024.1:1..31429;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000024.1 Genbank gene 187 420 . + . ID=gene-CLI77_07290;Name=CLI77_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07290 NSLS01000024.1 Protein Homology CDS 187 420 . + 0 ID=cds-PDP48906.1;Parent=gene-CLI77_07290;Dbxref=NCBI_GP:PDP48906.1;Name=PDP48906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457247.1;locus_tag=CLI77_07290;product=hypothetical protein;protein_id=PDP48906.1;transl_table=11 NSLS01000024.1 Genbank gene 758 1642 . - . ID=gene-CLI77_07295;Name=CLI77_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07295 NSLS01000024.1 Protein Homology CDS 758 1642 . - 0 ID=cds-PDP48878.1;Parent=gene-CLI77_07295;Dbxref=NCBI_GP:PDP48878.1;Name=PDP48878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964739.1;locus_tag=CLI77_07295;product=DUF3078 domain-containing protein;protein_id=PDP48878.1;transl_table=11 NSLS01000024.1 Genbank gene 1719 1796 . - . ID=gene-CLI77_07300;Name=CLI77_07300;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_07300 NSLS01000024.1 tRNAscan-SE tRNA 1719 1796 . - . ID=rna-CLI77_07300;Parent=gene-CLI77_07300;anticodon=(pos:complement(1759..1761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07300;product=tRNA-Val NSLS01000024.1 tRNAscan-SE exon 1719 1796 . - . ID=exon-CLI77_07300-1;Parent=rna-CLI77_07300;anticodon=(pos:complement(1759..1761));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07300;product=tRNA-Val NSLS01000024.1 Genbank gene 1839 1913 . - . ID=gene-CLI77_07305;Name=CLI77_07305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_07305 NSLS01000024.1 tRNAscan-SE tRNA 1839 1913 . - . ID=rna-CLI77_07305;Parent=gene-CLI77_07305;anticodon=(pos:complement(1876..1878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07305;product=tRNA-Val NSLS01000024.1 tRNAscan-SE exon 1839 1913 . - . ID=exon-CLI77_07305-1;Parent=rna-CLI77_07305;anticodon=(pos:complement(1876..1878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07305;product=tRNA-Val NSLS01000024.1 Genbank pseudogene 2201 2397 . + . ID=gene-CLI77_07310;Name=CLI77_07310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07310;pseudo=true NSLS01000024.1 Protein Homology CDS 2201 2397 . + 0 ID=cds-CLI77_07310;Parent=gene-CLI77_07310;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955941.1;locus_tag=CLI77_07310;product=IS4 family transposase;pseudo=true;transl_table=11 NSLS01000024.1 Genbank gene 2639 3433 . - . ID=gene-CLI77_07315;Name=CLI77_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07315 NSLS01000024.1 Protein Homology CDS 2639 3433 . - 0 ID=cds-PDP48879.1;Parent=gene-CLI77_07315;Dbxref=NCBI_GP:PDP48879.1;Name=PDP48879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873735.1;locus_tag=CLI77_07315;product=hypothetical protein;protein_id=PDP48879.1;transl_table=11 NSLS01000024.1 Genbank gene 3421 4131 . - . ID=gene-CLI77_07320;Name=CLI77_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07320 NSLS01000024.1 Protein Homology CDS 3421 4131 . - 0 ID=cds-PDP48880.1;Parent=gene-CLI77_07320;Dbxref=NCBI_GP:PDP48880.1;Name=PDP48880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956403.1;locus_tag=CLI77_07320;product=glycosyl transferase family 2;protein_id=PDP48880.1;transl_table=11 NSLS01000024.1 Genbank gene 4118 5305 . - . ID=gene-CLI77_07325;Name=CLI77_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07325 NSLS01000024.1 Protein Homology CDS 4118 5305 . - 0 ID=cds-PDP48881.1;Parent=gene-CLI77_07325;Dbxref=NCBI_GP:PDP48881.1;Name=PDP48881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816087.1;locus_tag=CLI77_07325;product=hypothetical protein;protein_id=PDP48881.1;transl_table=11 NSLS01000024.1 Genbank gene 5347 5970 . - . ID=gene-CLI77_07330;Name=CLI77_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07330 NSLS01000024.1 Protein Homology CDS 5347 5970 . - 0 ID=cds-PDP48882.1;Parent=gene-CLI77_07330;Dbxref=NCBI_GP:PDP48882.1;Name=PDP48882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873721.1;locus_tag=CLI77_07330;product=uridine kinase;protein_id=PDP48882.1;transl_table=11 NSLS01000024.1 Genbank gene 6025 7212 . - . ID=gene-CLI77_07335;Name=CLI77_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07335 NSLS01000024.1 Protein Homology CDS 6025 7212 . - 0 ID=cds-PDP48883.1;Parent=gene-CLI77_07335;Dbxref=NCBI_GP:PDP48883.1;Name=PDP48883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816088.1;locus_tag=CLI77_07335;product=8-amino-7-oxononanoate synthase;protein_id=PDP48883.1;transl_table=11 NSLS01000024.1 Genbank gene 7581 8075 . - . ID=gene-CLI77_07340;Name=CLI77_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07340 NSLS01000024.1 Protein Homology CDS 7581 8075 . - 0 ID=cds-PDP48884.1;Parent=gene-CLI77_07340;Dbxref=NCBI_GP:PDP48884.1;Name=PDP48884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873740.1;locus_tag=CLI77_07340;product=O-acetyl-ADP-ribose deacetylase;protein_id=PDP48884.1;transl_table=11 NSLS01000024.1 Genbank gene 8157 8945 . - . ID=gene-CLI77_07345;Name=CLI77_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07345 NSLS01000024.1 Protein Homology CDS 8157 8945 . - 0 ID=cds-PDP48885.1;Parent=gene-CLI77_07345;Dbxref=NCBI_GP:PDP48885.1;Name=PDP48885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458482.1;locus_tag=CLI77_07345;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=PDP48885.1;transl_table=11 NSLS01000024.1 Genbank gene 8974 9291 . - . ID=gene-CLI77_07350;Name=CLI77_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07350 NSLS01000024.1 Protein Homology CDS 8974 9291 . - 0 ID=cds-PDP48886.1;Parent=gene-CLI77_07350;Dbxref=NCBI_GP:PDP48886.1;Name=PDP48886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146258.1;locus_tag=CLI77_07350;product=DUF59 domain-containing protein;protein_id=PDP48886.1;transl_table=11 NSLS01000024.1 Genbank gene 9377 10528 . - . ID=gene-CLI77_07355;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CLI77_07355 NSLS01000024.1 Protein Homology CDS 9377 10528 . - 0 ID=cds-PDP48887.1;Parent=gene-CLI77_07355;Dbxref=NCBI_GP:PDP48887.1;Name=PDP48887.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584720.1;locus_tag=CLI77_07355;product=molecular chaperone DnaJ;protein_id=PDP48887.1;transl_table=11 NSLS01000024.1 Genbank gene 10571 11155 . - . ID=gene-CLI77_07360;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CLI77_07360 NSLS01000024.1 Protein Homology CDS 10571 11155 . - 0 ID=cds-PDP48888.1;Parent=gene-CLI77_07360;Dbxref=NCBI_GP:PDP48888.1;Name=PDP48888.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458479.1;locus_tag=CLI77_07360;product=nucleotide exchange factor GrpE;protein_id=PDP48888.1;transl_table=11 NSLS01000024.1 Genbank gene 11502 14870 . + . ID=gene-CLI77_07365;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CLI77_07365 NSLS01000024.1 Protein Homology CDS 11502 14870 . + 0 ID=cds-PDP48889.1;Parent=gene-CLI77_07365;Dbxref=NCBI_GP:PDP48889.1;Name=PDP48889.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584722.1;locus_tag=CLI77_07365;product=transcription-repair coupling factor;protein_id=PDP48889.1;transl_table=11 NSLS01000024.1 Genbank gene 14847 16184 . - . ID=gene-CLI77_07370;Name=CLI77_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07370 NSLS01000024.1 Protein Homology CDS 14847 16184 . - 0 ID=cds-PDP48890.1;Parent=gene-CLI77_07370;Dbxref=NCBI_GP:PDP48890.1;Name=PDP48890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584723.1;locus_tag=CLI77_07370;product=phosphoesterase;protein_id=PDP48890.1;transl_table=11 NSLS01000024.1 Genbank gene 16246 16920 . - . ID=gene-CLI77_07375;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CLI77_07375 NSLS01000024.1 Protein Homology CDS 16246 16920 . - 0 ID=cds-PDP48891.1;Parent=gene-CLI77_07375;Dbxref=NCBI_GP:PDP48891.1;Name=PDP48891.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964231.1;locus_tag=CLI77_07375;product=endonuclease III;protein_id=PDP48891.1;transl_table=11 NSLS01000024.1 Genbank gene 16939 17961 . - . ID=gene-CLI77_07380;Name=CLI77_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07380 NSLS01000024.1 Protein Homology CDS 16939 17961 . - 0 ID=cds-PDP48892.1;Parent=gene-CLI77_07380;Dbxref=NCBI_GP:PDP48892.1;Name=PDP48892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964230.1;locus_tag=CLI77_07380;product=phenylalanine--tRNA ligase subunit alpha;protein_id=PDP48892.1;transl_table=11 NSLS01000024.1 Genbank gene 18038 18715 . - . ID=gene-CLI77_07385;Name=CLI77_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07385 NSLS01000024.1 Protein Homology CDS 18038 18715 . - 0 ID=cds-PDP48893.1;Parent=gene-CLI77_07385;Dbxref=NCBI_GP:PDP48893.1;Name=PDP48893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458475.1;locus_tag=CLI77_07385;product=hypothetical protein;protein_id=PDP48893.1;transl_table=11 NSLS01000024.1 Genbank gene 19069 19392 . - . ID=gene-CLI77_07390;Name=CLI77_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07390 NSLS01000024.1 Protein Homology CDS 19069 19392 . - 0 ID=cds-PDP48894.1;Parent=gene-CLI77_07390;Dbxref=NCBI_GP:PDP48894.1;Name=PDP48894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873723.1;locus_tag=CLI77_07390;product=hypothetical protein;protein_id=PDP48894.1;transl_table=11 NSLS01000024.1 Genbank gene 19397 20938 . - . ID=gene-CLI77_07395;Name=CLI77_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07395 NSLS01000024.1 Protein Homology CDS 19397 20938 . - 0 ID=cds-PDP48895.1;Parent=gene-CLI77_07395;Dbxref=NCBI_GP:PDP48895.1;Name=PDP48895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584730.1;locus_tag=CLI77_07395;product=magnesium chelatase;protein_id=PDP48895.1;transl_table=11 NSLS01000024.1 Genbank gene 20964 21986 . - . ID=gene-CLI77_07400;Name=CLI77_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07400 NSLS01000024.1 Protein Homology CDS 20964 21986 . - 0 ID=cds-PDP48896.1;Parent=gene-CLI77_07400;Dbxref=NCBI_GP:PDP48896.1;Name=PDP48896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584731.1;locus_tag=CLI77_07400;product=antioxidant%2C AhpC/TSA family protein;protein_id=PDP48896.1;transl_table=11 NSLS01000024.1 Genbank gene 22001 22582 . - . ID=gene-CLI77_07405;Name=CLI77_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07405 NSLS01000024.1 Protein Homology CDS 22001 22582 . - 0 ID=cds-PDP48897.1;Parent=gene-CLI77_07405;Dbxref=NCBI_GP:PDP48897.1;Name=PDP48897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873718.1;locus_tag=CLI77_07405;product=phosphoribosylglycinamide formyltransferase;protein_id=PDP48897.1;transl_table=11 NSLS01000024.1 Genbank gene 22751 22987 . + . ID=gene-CLI77_07410;Name=CLI77_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07410 NSLS01000024.1 Protein Homology CDS 22751 22987 . + 0 ID=cds-PDP48898.1;Parent=gene-CLI77_07410;Dbxref=NCBI_GP:PDP48898.1;Name=PDP48898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010855324.1;locus_tag=CLI77_07410;product=acyl carrier protein;protein_id=PDP48898.1;transl_table=11 NSLS01000024.1 Genbank gene 22997 24253 . + . ID=gene-CLI77_07415;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CLI77_07415 NSLS01000024.1 Protein Homology CDS 22997 24253 . + 0 ID=cds-PDP48899.1;Parent=gene-CLI77_07415;Dbxref=NCBI_GP:PDP48899.1;Name=PDP48899.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645359.1;locus_tag=CLI77_07415;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=PDP48899.1;transl_table=11 NSLS01000024.1 Genbank gene 24265 25050 . + . ID=gene-CLI77_07420;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CLI77_07420 NSLS01000024.1 Protein Homology CDS 24265 25050 . + 0 ID=cds-PDP48900.1;Parent=gene-CLI77_07420;Dbxref=NCBI_GP:PDP48900.1;Name=PDP48900.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584735.1;locus_tag=CLI77_07420;product=ribonuclease III;protein_id=PDP48900.1;transl_table=11 NSLS01000024.1 Genbank gene 25177 28122 . - . ID=gene-CLI77_07425;Name=CLI77_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07425 NSLS01000024.1 Protein Homology CDS 25177 28122 . - 0 ID=cds-PDP48901.1;Parent=gene-CLI77_07425;Dbxref=NCBI_GP:PDP48901.1;Name=PDP48901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816099.1;locus_tag=CLI77_07425;product=protein translocase subunit SecDF;protein_id=PDP48901.1;transl_table=11 NSLS01000024.1 Genbank gene 28340 28786 . - . ID=gene-CLI77_07430;Name=CLI77_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07430 NSLS01000024.1 Protein Homology CDS 28340 28786 . - 0 ID=cds-PDP48907.1;Parent=gene-CLI77_07430;Dbxref=NCBI_GP:PDP48907.1;Name=PDP48907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873722.1;locus_tag=CLI77_07430;product=N-acetyltransferase;protein_id=PDP48907.1;transl_table=11 NSLS01000024.1 Genbank gene 28863 29492 . - . ID=gene-CLI77_07435;Name=CLI77_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07435 NSLS01000024.1 Protein Homology CDS 28863 29492 . - 0 ID=cds-PDP48902.1;Parent=gene-CLI77_07435;Dbxref=NCBI_GP:PDP48902.1;Name=PDP48902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956397.1;locus_tag=CLI77_07435;product=ABC transporter ATP-binding protein;protein_id=PDP48902.1;transl_table=11 NSLS01000024.1 Genbank gene 29482 30429 . - . ID=gene-CLI77_07440;Name=CLI77_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07440 NSLS01000024.1 Protein Homology CDS 29482 30429 . - 0 ID=cds-PDP48903.1;Parent=gene-CLI77_07440;Dbxref=NCBI_GP:PDP48903.1;Name=PDP48903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956396.1;locus_tag=CLI77_07440;product=adhesin;protein_id=PDP48903.1;transl_table=11 NSLS01000024.1 Genbank gene 30341 30529 . + . ID=gene-CLI77_07445;Name=CLI77_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07445 NSLS01000024.1 Protein Homology CDS 30341 30529 . + 0 ID=cds-PDP48908.1;Parent=gene-CLI77_07445;Dbxref=NCBI_GP:PDP48908.1;Name=PDP48908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584740.1;locus_tag=CLI77_07445;product=hypothetical protein;protein_id=PDP48908.1;transl_table=11 NSLS01000024.1 Genbank gene 30545 30814 . - . ID=gene-CLI77_07450;Name=CLI77_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07450 NSLS01000024.1 Protein Homology CDS 30545 30814 . - 0 ID=cds-PDP48904.1;Parent=gene-CLI77_07450;Dbxref=NCBI_GP:PDP48904.1;Name=PDP48904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467430.1;locus_tag=CLI77_07450;product=30S ribosomal protein S15;protein_id=PDP48904.1;transl_table=11 NSLS01000024.1 Genbank gene 31087 31429 . + . ID=gene-CLI77_07455;Name=CLI77_07455;end_range=31429,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07455;partial=true NSLS01000024.1 Protein Homology CDS 31087 31429 . + 0 ID=cds-PDP48905.1;Parent=gene-CLI77_07455;Dbxref=NCBI_GP:PDP48905.1;Name=PDP48905.1;end_range=31429,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965475.1;locus_tag=CLI77_07455;partial=true;product=hypothetical protein;protein_id=PDP48905.1;transl_table=11 ##sequence-region NSLS01000025.1 1 31333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000025.1 Genbank region 1 31333 . + . ID=NSLS01000025.1:1..31333;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000025.1 Genbank gene 1 628 . + . ID=gene-CLI77_07460;Name=CLI77_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07460;partial=true;start_range=.,1 NSLS01000025.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48836.1;Parent=gene-CLI77_07460;Dbxref=NCBI_GP:PDP48836.1;Name=PDP48836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_07460;partial=true;product=IS3 family transposase;protein_id=PDP48836.1;start_range=.,1;transl_table=11 NSLS01000025.1 Genbank gene 924 1526 . + . ID=gene-CLI77_07465;Name=CLI77_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07465 NSLS01000025.1 Protein Homology CDS 924 1526 . + 0 ID=cds-PDP48837.1;Parent=gene-CLI77_07465;Dbxref=NCBI_GP:PDP48837.1;Name=PDP48837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145854.1;locus_tag=CLI77_07465;product=riboflavin synthase;protein_id=PDP48837.1;transl_table=11 NSLS01000025.1 Genbank gene 1523 2074 . + . ID=gene-CLI77_07470;Name=CLI77_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07470 NSLS01000025.1 Protein Homology CDS 1523 2074 . + 0 ID=cds-PDP48838.1;Parent=gene-CLI77_07470;Dbxref=NCBI_GP:PDP48838.1;Name=PDP48838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457762.1;locus_tag=CLI77_07470;product=nitroreductase;protein_id=PDP48838.1;transl_table=11 NSLS01000025.1 Genbank gene 2133 3347 . + . ID=gene-CLI77_07475;Name=CLI77_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07475 NSLS01000025.1 Protein Homology CDS 2133 3347 . + 0 ID=cds-PDP48839.1;Parent=gene-CLI77_07475;Dbxref=NCBI_GP:PDP48839.1;Name=PDP48839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873581.1;locus_tag=CLI77_07475;product=cysteine desulfurase CsdA;protein_id=PDP48839.1;transl_table=11 NSLS01000025.1 Genbank gene 3358 3963 . + . ID=gene-CLI77_07480;Name=CLI77_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07480 NSLS01000025.1 Protein Homology CDS 3358 3963 . + 0 ID=cds-PDP48840.1;Parent=gene-CLI77_07480;Dbxref=NCBI_GP:PDP48840.1;Name=PDP48840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457764.1;locus_tag=CLI77_07480;product=ribonuclease HII;protein_id=PDP48840.1;transl_table=11 NSLS01000025.1 Genbank gene 4031 4216 . + . ID=gene-CLI77_07485;Name=CLI77_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07485 NSLS01000025.1 Protein Homology CDS 4031 4216 . + 0 ID=cds-PDP48859.1;Parent=gene-CLI77_07485;Dbxref=NCBI_GP:PDP48859.1;Name=PDP48859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584691.1;locus_tag=CLI77_07485;product=hypothetical protein;protein_id=PDP48859.1;transl_table=11 NSLS01000025.1 Genbank gene 4213 4665 . + . ID=gene-CLI77_07490;Name=CLI77_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07490 NSLS01000025.1 Protein Homology CDS 4213 4665 . + 0 ID=cds-PDP48841.1;Parent=gene-CLI77_07490;Dbxref=NCBI_GP:PDP48841.1;Name=PDP48841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965879.1;locus_tag=CLI77_07490;product=nucleoside deaminase;protein_id=PDP48841.1;transl_table=11 NSLS01000025.1 Genbank gene 4697 5611 . + . ID=gene-CLI77_07495;Name=CLI77_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07495 NSLS01000025.1 Protein Homology CDS 4697 5611 . + 0 ID=cds-PDP48842.1;Parent=gene-CLI77_07495;Dbxref=NCBI_GP:PDP48842.1;Name=PDP48842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965880.1;locus_tag=CLI77_07495;product=ribonuclease Z;protein_id=PDP48842.1;transl_table=11 NSLS01000025.1 Genbank gene 5586 6155 . + . ID=gene-CLI77_07500;Name=CLI77_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07500 NSLS01000025.1 Protein Homology CDS 5586 6155 . + 0 ID=cds-PDP48843.1;Parent=gene-CLI77_07500;Dbxref=NCBI_GP:PDP48843.1;Name=PDP48843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965881.1;locus_tag=CLI77_07500;product=hydrolase Nlp/P60;protein_id=PDP48843.1;transl_table=11 NSLS01000025.1 Genbank gene 7023 7787 . - . ID=gene-CLI77_07505;Name=CLI77_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07505 NSLS01000025.1 Protein Homology CDS 7023 7787 . - 0 ID=cds-PDP48844.1;Parent=gene-CLI77_07505;Dbxref=NCBI_GP:PDP48844.1;Name=PDP48844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457768.1;locus_tag=CLI77_07505;product=RNA methyltransferase;protein_id=PDP48844.1;transl_table=11 NSLS01000025.1 Genbank gene 7872 8270 . - . ID=gene-CLI77_07510;Name=CLI77_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07510 NSLS01000025.1 Protein Homology CDS 7872 8270 . - 0 ID=cds-PDP48845.1;Parent=gene-CLI77_07510;Dbxref=NCBI_GP:PDP48845.1;Name=PDP48845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585287.1;locus_tag=CLI77_07510;product=lactoylglutathione lyase;protein_id=PDP48845.1;transl_table=11 NSLS01000025.1 Genbank gene 8426 9763 . - . ID=gene-CLI77_07515;Name=CLI77_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07515 NSLS01000025.1 Protein Homology CDS 8426 9763 . - 0 ID=cds-PDP48846.1;Parent=gene-CLI77_07515;Dbxref=NCBI_GP:PDP48846.1;Name=PDP48846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873552.1;locus_tag=CLI77_07515;product=ATP-binding protein;protein_id=PDP48846.1;transl_table=11 NSLS01000025.1 Genbank gene 9789 11183 . - . ID=gene-CLI77_07520;Name=CLI77_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07520 NSLS01000025.1 Protein Homology CDS 9789 11183 . - 0 ID=cds-PDP48860.1;Parent=gene-CLI77_07520;Dbxref=NCBI_GP:PDP48860.1;Name=PDP48860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585289.1;locus_tag=CLI77_07520;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP48860.1;transl_table=11 NSLS01000025.1 Genbank gene 11698 11774 . - . ID=gene-CLI77_07525;Name=CLI77_07525;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_07525 NSLS01000025.1 tRNAscan-SE tRNA 11698 11774 . - . ID=rna-CLI77_07525;Parent=gene-CLI77_07525;anticodon=(pos:complement(11738..11740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07525;product=tRNA-Arg NSLS01000025.1 tRNAscan-SE exon 11698 11774 . - . ID=exon-CLI77_07525-1;Parent=rna-CLI77_07525;anticodon=(pos:complement(11738..11740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07525;product=tRNA-Arg NSLS01000025.1 Genbank gene 11835 12581 . - . ID=gene-CLI77_07530;Name=CLI77_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07530 NSLS01000025.1 Protein Homology CDS 11835 12581 . - 0 ID=cds-PDP48847.1;Parent=gene-CLI77_07530;Dbxref=NCBI_GP:PDP48847.1;Name=PDP48847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457771.1;locus_tag=CLI77_07530;product=glycosyltransferase;protein_id=PDP48847.1;transl_table=11 NSLS01000025.1 Genbank gene 12733 13467 . - . ID=gene-CLI77_07535;Name=CLI77_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07535 NSLS01000025.1 Protein Homology CDS 12733 13467 . - 0 ID=cds-PDP48848.1;Parent=gene-CLI77_07535;Dbxref=NCBI_GP:PDP48848.1;Name=PDP48848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873603.1;locus_tag=CLI77_07535;product=PorT family protein;protein_id=PDP48848.1;transl_table=11 NSLS01000025.1 Genbank gene 13606 14256 . + . ID=gene-CLI77_07540;Name=CLI77_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07540 NSLS01000025.1 Protein Homology CDS 13606 14256 . + 0 ID=cds-PDP48849.1;Parent=gene-CLI77_07540;Dbxref=NCBI_GP:PDP48849.1;Name=PDP48849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585294.1;locus_tag=CLI77_07540;product=uracil phosphoribosyltransferase;protein_id=PDP48849.1;transl_table=11 NSLS01000025.1 Genbank gene 14240 16147 . + . ID=gene-CLI77_07545;Name=CLI77_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07545 NSLS01000025.1 Protein Homology CDS 14240 16147 . + 0 ID=cds-PDP48850.1;Parent=gene-CLI77_07545;Dbxref=NCBI_GP:PDP48850.1;Name=PDP48850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816447.1;locus_tag=CLI77_07545;product=collagenase;protein_id=PDP48850.1;transl_table=11 NSLS01000025.1 Genbank gene 16432 16653 . + . ID=gene-CLI77_07550;Name=CLI77_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07550 NSLS01000025.1 Protein Homology CDS 16432 16653 . + 0 ID=cds-PDP48851.1;Parent=gene-CLI77_07550;Dbxref=NCBI_GP:PDP48851.1;Name=PDP48851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI77_07550;product=hypothetical protein;protein_id=PDP48851.1;transl_table=11 NSLS01000025.1 Genbank gene 16884 19250 . + . ID=gene-CLI77_07555;Name=CLI77_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07555 NSLS01000025.1 Protein Homology CDS 16884 19250 . + 0 ID=cds-PDP48852.1;Parent=gene-CLI77_07555;Dbxref=NCBI_GP:PDP48852.1;Name=PDP48852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457773.1;locus_tag=CLI77_07555;product=DNA topoisomerase I;protein_id=PDP48852.1;transl_table=11 NSLS01000025.1 Genbank gene 19254 20012 . + . ID=gene-CLI77_07560;Name=CLI77_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07560 NSLS01000025.1 Protein Homology CDS 19254 20012 . + 0 ID=cds-PDP48853.1;Parent=gene-CLI77_07560;Dbxref=NCBI_GP:PDP48853.1;Name=PDP48853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585297.1;locus_tag=CLI77_07560;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=PDP48853.1;transl_table=11 NSLS01000025.1 Genbank gene 20739 21221 . + . ID=gene-CLI77_07565;Name=CLI77_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07565 NSLS01000025.1 Protein Homology CDS 20739 21221 . + 0 ID=cds-PDP48854.1;Parent=gene-CLI77_07565;Dbxref=NCBI_GP:PDP48854.1;Name=PDP48854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457775.1;locus_tag=CLI77_07565;product=DNA-binding protein;protein_id=PDP48854.1;transl_table=11 NSLS01000025.1 Genbank gene 21380 22690 . + . ID=gene-CLI77_07570;Name=CLI77_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07570 NSLS01000025.1 Protein Homology CDS 21380 22690 . + 0 ID=cds-PDP48861.1;Parent=gene-CLI77_07570;Dbxref=NCBI_GP:PDP48861.1;Name=PDP48861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964791.1;locus_tag=CLI77_07570;product=hypothetical protein;protein_id=PDP48861.1;transl_table=11 NSLS01000025.1 Genbank gene 22929 23258 . + . ID=gene-CLI77_07575;Name=CLI77_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07575 NSLS01000025.1 Protein Homology CDS 22929 23258 . + 0 ID=cds-PDP48862.1;Parent=gene-CLI77_07575;Dbxref=NCBI_GP:PDP48862.1;Name=PDP48862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816453.1;locus_tag=CLI77_07575;product=hypothetical protein;protein_id=PDP48862.1;transl_table=11 NSLS01000025.1 Genbank gene 23372 24724 . - . ID=gene-CLI77_07580;Name=CLI77_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07580 NSLS01000025.1 Protein Homology CDS 23372 24724 . - 0 ID=cds-PDP48855.1;Parent=gene-CLI77_07580;Dbxref=NCBI_GP:PDP48855.1;Name=PDP48855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875044.1;locus_tag=CLI77_07580;product=hypothetical protein;protein_id=PDP48855.1;transl_table=11 NSLS01000025.1 Genbank gene 24774 25421 . - . ID=gene-CLI77_07585;Name=CLI77_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07585 NSLS01000025.1 Protein Homology CDS 24774 25421 . - 0 ID=cds-PDP48856.1;Parent=gene-CLI77_07585;Dbxref=NCBI_GP:PDP48856.1;Name=PDP48856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816455.1;locus_tag=CLI77_07585;product=hypothetical protein;protein_id=PDP48856.1;transl_table=11 NSLS01000025.1 Genbank gene 25518 27605 . - . ID=gene-CLI77_07590;Name=CLI77_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07590 NSLS01000025.1 Protein Homology CDS 25518 27605 . - 0 ID=cds-PDP48863.1;Parent=gene-CLI77_07590;Dbxref=NCBI_GP:PDP48863.1;Name=PDP48863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956118.1;locus_tag=CLI77_07590;product=dipeptidyl carboxypeptidase II;protein_id=PDP48863.1;transl_table=11 NSLS01000025.1 Genbank gene 27683 29821 . - . ID=gene-CLI77_07595;Name=CLI77_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07595 NSLS01000025.1 Protein Homology CDS 27683 29821 . - 0 ID=cds-PDP48857.1;Parent=gene-CLI77_07595;Dbxref=NCBI_GP:PDP48857.1;Name=PDP48857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585301.1;locus_tag=CLI77_07595;product=hypothetical protein;protein_id=PDP48857.1;transl_table=11 NSLS01000025.1 Genbank gene 30100 31185 . + . ID=gene-CLI77_07600;Name=CLI77_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07600 NSLS01000025.1 Protein Homology CDS 30100 31185 . + 0 ID=cds-PDP48858.1;Parent=gene-CLI77_07600;Dbxref=NCBI_GP:PDP48858.1;Name=PDP48858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_07600;product=IS5/IS1182 family transposase;protein_id=PDP48858.1;transl_table=11 ##sequence-region NSLS01000026.1 1 30810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000026.1 Genbank region 1 30810 . + . ID=NSLS01000026.1:1..30810;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000026.1 Genbank pseudogene 34 132 . - . ID=gene-CLI77_07605;Name=CLI77_07605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07605;pseudo=true NSLS01000026.1 Protein Homology CDS 34 132 . - 0 ID=cds-CLI77_07605;Parent=gene-CLI77_07605;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI77_07605;product=integrase;pseudo=true;transl_table=11 NSLS01000026.1 Genbank pseudogene 125 877 . + . ID=gene-CLI77_07610;Name=CLI77_07610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07610;pseudo=true NSLS01000026.1 Protein Homology CDS 125 877 . + 0 ID=cds-CLI77_07610;Parent=gene-CLI77_07610;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965803.1;locus_tag=CLI77_07610;product=secretion protein;pseudo=true;transl_table=11 NSLS01000026.1 Genbank gene 1471 2754 . + . ID=gene-CLI77_07615;Name=CLI77_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07615 NSLS01000026.1 Protein Homology CDS 1471 2754 . + 0 ID=cds-PDP48805.1;Parent=gene-CLI77_07615;Dbxref=NCBI_GP:PDP48805.1;Name=PDP48805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457281.1;locus_tag=CLI77_07615;product=ATP-dependent helicase;protein_id=PDP48805.1;transl_table=11 NSLS01000026.1 Genbank gene 2941 3882 . + . ID=gene-CLI77_07620;Name=CLI77_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07620 NSLS01000026.1 Protein Homology CDS 2941 3882 . + 0 ID=cds-PDP48806.1;Parent=gene-CLI77_07620;Dbxref=NCBI_GP:PDP48806.1;Name=PDP48806.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873771.1;locus_tag=CLI77_07620;product=ribose-phosphate pyrophosphokinase;protein_id=PDP48806.1;transl_table=11 NSLS01000026.1 Genbank gene 3988 8778 . + . ID=gene-CLI77_07625;Name=CLI77_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07625 NSLS01000026.1 Protein Homology CDS 3988 8778 . + 0 ID=cds-PDP48807.1;Parent=gene-CLI77_07625;Dbxref=NCBI_GP:PDP48807.1;Name=PDP48807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873764.1;locus_tag=CLI77_07625;product=hypothetical protein;protein_id=PDP48807.1;transl_table=11 NSLS01000026.1 Genbank gene 8786 11113 . + . ID=gene-CLI77_07630;Name=CLI77_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07630 NSLS01000026.1 Protein Homology CDS 8786 11113 . + 0 ID=cds-PDP48808.1;Parent=gene-CLI77_07630;Dbxref=NCBI_GP:PDP48808.1;Name=PDP48808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965799.1;locus_tag=CLI77_07630;product=hypothetical protein;protein_id=PDP48808.1;transl_table=11 NSLS01000026.1 Genbank gene 11535 16082 . + . ID=gene-CLI77_07635;Name=CLI77_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07635 NSLS01000026.1 Protein Homology CDS 11535 16082 . + 0 ID=cds-PDP48809.1;Parent=gene-CLI77_07635;Dbxref=NCBI_GP:PDP48809.1;Name=PDP48809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457277.1;locus_tag=CLI77_07635;product=hypothetical protein;protein_id=PDP48809.1;transl_table=11 NSLS01000026.1 Genbank gene 16493 17752 . + . ID=gene-CLI77_07640;Name=CLI77_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07640 NSLS01000026.1 Protein Homology CDS 16493 17752 . + 0 ID=cds-PDP48810.1;Parent=gene-CLI77_07640;Dbxref=NCBI_GP:PDP48810.1;Name=PDP48810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873744.1;locus_tag=CLI77_07640;product=DUF5103 domain-containing protein;protein_id=PDP48810.1;transl_table=11 NSLS01000026.1 Genbank gene 17823 18176 . - . ID=gene-CLI77_07645;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CLI77_07645 NSLS01000026.1 Protein Homology CDS 17823 18176 . - 0 ID=cds-PDP48811.1;Parent=gene-CLI77_07645;Dbxref=NCBI_GP:PDP48811.1;Name=PDP48811.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965795.1;locus_tag=CLI77_07645;product=dihydroneopterin aldolase;protein_id=PDP48811.1;transl_table=11 NSLS01000026.1 Genbank gene 18219 19127 . - . ID=gene-CLI77_07650;Name=CLI77_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07650 NSLS01000026.1 Protein Homology CDS 18219 19127 . - 0 ID=cds-PDP48823.1;Parent=gene-CLI77_07650;Dbxref=NCBI_GP:PDP48823.1;Name=PDP48823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584697.1;locus_tag=CLI77_07650;product=cation transporter;protein_id=PDP48823.1;transl_table=11 NSLS01000026.1 Genbank gene 19534 20718 . - . ID=gene-CLI77_07655;Name=CLI77_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07655 NSLS01000026.1 Protein Homology CDS 19534 20718 . - 0 ID=cds-PDP48812.1;Parent=gene-CLI77_07655;Dbxref=NCBI_GP:PDP48812.1;Name=PDP48812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584698.1;locus_tag=CLI77_07655;product=hypothetical protein;protein_id=PDP48812.1;transl_table=11 NSLS01000026.1 Genbank gene 20775 21833 . - . ID=gene-CLI77_07660;Name=CLI77_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07660 NSLS01000026.1 Protein Homology CDS 20775 21833 . - 0 ID=cds-PDP48813.1;Parent=gene-CLI77_07660;Dbxref=NCBI_GP:PDP48813.1;Name=PDP48813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816071.1;locus_tag=CLI77_07660;product=peptide-methionine (R)-S-oxide reductase;protein_id=PDP48813.1;transl_table=11 NSLS01000026.1 Genbank gene 21895 22368 . - . ID=gene-CLI77_07665;Name=CLI77_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07665 NSLS01000026.1 Protein Homology CDS 21895 22368 . - 0 ID=cds-PDP48814.1;Parent=gene-CLI77_07665;Dbxref=NCBI_GP:PDP48814.1;Name=PDP48814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584700.1;locus_tag=CLI77_07665;product=ribosomal RNA large subunit methyltransferase H;protein_id=PDP48814.1;transl_table=11 NSLS01000026.1 Genbank gene 22368 22787 . - . ID=gene-CLI77_07670;Name=CLI77_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07670 NSLS01000026.1 Protein Homology CDS 22368 22787 . - 0 ID=cds-PDP48815.1;Parent=gene-CLI77_07670;Dbxref=NCBI_GP:PDP48815.1;Name=PDP48815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584701.1;locus_tag=CLI77_07670;product=DUF3127 domain-containing protein;protein_id=PDP48815.1;transl_table=11 NSLS01000026.1 Genbank gene 22842 23825 . - . ID=gene-CLI77_07675;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CLI77_07675 NSLS01000026.1 Protein Homology CDS 22842 23825 . - 0 ID=cds-PDP48816.1;Parent=gene-CLI77_07675;Dbxref=NCBI_GP:PDP48816.1;Name=PDP48816.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965789.1;locus_tag=CLI77_07675;product=tryptophan--tRNA ligase;protein_id=PDP48816.1;transl_table=11 NSLS01000026.1 Genbank gene 24033 24431 . - . ID=gene-CLI77_07680;Name=CLI77_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07680 NSLS01000026.1 Protein Homology CDS 24033 24431 . - 0 ID=cds-PDP48817.1;Parent=gene-CLI77_07680;Dbxref=NCBI_GP:PDP48817.1;Name=PDP48817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873428.1;locus_tag=CLI77_07680;product=hypothetical protein;protein_id=PDP48817.1;transl_table=11 NSLS01000026.1 Genbank gene 24908 25999 . + . ID=gene-CLI77_07685;Name=CLI77_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07685 NSLS01000026.1 Protein Homology CDS 24908 25999 . + 0 ID=cds-PDP48818.1;Parent=gene-CLI77_07685;Dbxref=NCBI_GP:PDP48818.1;Name=PDP48818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584704.1;locus_tag=CLI77_07685;product=DUF4831 domain-containing protein;protein_id=PDP48818.1;transl_table=11 NSLS01000026.1 Genbank gene 26025 27557 . + . ID=gene-CLI77_07690;Name=CLI77_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07690 NSLS01000026.1 Protein Homology CDS 26025 27557 . + 0 ID=cds-PDP48819.1;Parent=gene-CLI77_07690;Dbxref=NCBI_GP:PDP48819.1;Name=PDP48819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965208.1;locus_tag=CLI77_07690;product=MFS transporter;protein_id=PDP48819.1;transl_table=11 NSLS01000026.1 Genbank gene 27738 28730 . + . ID=gene-CLI77_07695;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CLI77_07695 NSLS01000026.1 Protein Homology CDS 27738 28730 . + 0 ID=cds-PDP48820.1;Parent=gene-CLI77_07695;Dbxref=NCBI_GP:PDP48820.1;Name=PDP48820.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956492.1;locus_tag=CLI77_07695;product=biotin synthase BioB;protein_id=PDP48820.1;transl_table=11 NSLS01000026.1 Genbank gene 28720 30021 . + . ID=gene-CLI77_07700;Name=CLI77_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07700 NSLS01000026.1 Protein Homology CDS 28720 30021 . + 0 ID=cds-PDP48821.1;Parent=gene-CLI77_07700;Dbxref=NCBI_GP:PDP48821.1;Name=PDP48821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873749.1;locus_tag=CLI77_07700;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=PDP48821.1;transl_table=11 NSLS01000026.1 Genbank gene 30033 30509 . + . ID=gene-CLI77_07705;Name=CLI77_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07705 NSLS01000026.1 Protein Homology CDS 30033 30509 . + 0 ID=cds-PDP48822.1;Parent=gene-CLI77_07705;Dbxref=NCBI_GP:PDP48822.1;Name=PDP48822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816077.1;locus_tag=CLI77_07705;product=hypothetical protein;protein_id=PDP48822.1;transl_table=11 ##sequence-region NSLS01000027.1 1 30262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000027.1 Genbank region 1 30262 . + . ID=NSLS01000027.1:1..30262;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000027.1 Genbank gene 1 628 . + . ID=gene-CLI77_07710;Name=CLI77_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07710;partial=true;start_range=.,1 NSLS01000027.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48763.1;Parent=gene-CLI77_07710;Dbxref=NCBI_GP:PDP48763.1;Name=PDP48763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_07710;partial=true;product=IS3 family transposase;protein_id=PDP48763.1;start_range=.,1;transl_table=11 NSLS01000027.1 Genbank gene 1002 1535 . + . ID=gene-CLI77_07715;Name=CLI77_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07715 NSLS01000027.1 Protein Homology CDS 1002 1535 . + 0 ID=cds-PDP48789.1;Parent=gene-CLI77_07715;Dbxref=NCBI_GP:PDP48789.1;Name=PDP48789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956477.1;locus_tag=CLI77_07715;product=phosphoglycerate kinase;protein_id=PDP48789.1;transl_table=11 NSLS01000027.1 Genbank gene 1627 2088 . + . ID=gene-CLI77_07720;Name=CLI77_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07720 NSLS01000027.1 Protein Homology CDS 1627 2088 . + 0 ID=cds-PDP48764.1;Parent=gene-CLI77_07720;Dbxref=NCBI_GP:PDP48764.1;Name=PDP48764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815308.1;locus_tag=CLI77_07720;product=hypothetical protein;protein_id=PDP48764.1;transl_table=11 NSLS01000027.1 Genbank gene 2097 2606 . + . ID=gene-CLI77_07725;Name=CLI77_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07725 NSLS01000027.1 Protein Homology CDS 2097 2606 . + 0 ID=cds-PDP48790.1;Parent=gene-CLI77_07725;Dbxref=NCBI_GP:PDP48790.1;Name=PDP48790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583671.1;locus_tag=CLI77_07725;product=Cys-tRNA(Pro) deacylase;protein_id=PDP48790.1;transl_table=11 NSLS01000027.1 Genbank gene 2640 5192 . + . ID=gene-CLI77_07730;Name=CLI77_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07730 NSLS01000027.1 Protein Homology CDS 2640 5192 . + 0 ID=cds-PDP48765.1;Parent=gene-CLI77_07730;Dbxref=NCBI_GP:PDP48765.1;Name=PDP48765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874426.1;locus_tag=CLI77_07730;product=hypothetical protein;protein_id=PDP48765.1;transl_table=11 NSLS01000027.1 Genbank gene 5761 6396 . + . ID=gene-CLI77_07735;Name=CLI77_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07735 NSLS01000027.1 Protein Homology CDS 5761 6396 . + 0 ID=cds-PDP48766.1;Parent=gene-CLI77_07735;Dbxref=NCBI_GP:PDP48766.1;Name=PDP48766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458659.1;locus_tag=CLI77_07735;product=DUF4294 domain-containing protein;protein_id=PDP48766.1;transl_table=11 NSLS01000027.1 Genbank gene 6464 6859 . + . ID=gene-CLI77_07740;Name=CLI77_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07740 NSLS01000027.1 Protein Homology CDS 6464 6859 . + 0 ID=cds-PDP48791.1;Parent=gene-CLI77_07740;Dbxref=NCBI_GP:PDP48791.1;Name=PDP48791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583674.1;locus_tag=CLI77_07740;product=hypothetical protein;protein_id=PDP48791.1;transl_table=11 NSLS01000027.1 Genbank gene 6886 9399 . - . ID=gene-CLI77_07745;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CLI77_07745 NSLS01000027.1 Protein Homology CDS 6886 9399 . - 0 ID=cds-PDP48767.1;Parent=gene-CLI77_07745;Dbxref=NCBI_GP:PDP48767.1;Name=PDP48767.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964490.1;locus_tag=CLI77_07745;product=primosomal protein N';protein_id=PDP48767.1;transl_table=11 NSLS01000027.1 Genbank gene 9433 10905 . - . ID=gene-CLI77_07750;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=CLI77_07750 NSLS01000027.1 Protein Homology CDS 9433 10905 . - 0 ID=cds-PDP48768.1;Parent=gene-CLI77_07750;Dbxref=NCBI_GP:PDP48768.1;Name=PDP48768.1;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583676.1;locus_tag=CLI77_07750;product=glutamate synthase (NADPH)%2C homotetrameric;protein_id=PDP48768.1;transl_table=11 NSLS01000027.1 Genbank gene 10928 11719 . - . ID=gene-CLI77_07755;Name=CLI77_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07755 NSLS01000027.1 Protein Homology CDS 10928 11719 . - 0 ID=cds-PDP48769.1;Parent=gene-CLI77_07755;Dbxref=NCBI_GP:PDP48769.1;Name=PDP48769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152648.1;locus_tag=CLI77_07755;product=ferredoxin-NADP reductase;protein_id=PDP48769.1;transl_table=11 NSLS01000027.1 Genbank gene 11921 12598 . + . ID=gene-CLI77_07760;Name=CLI77_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07760 NSLS01000027.1 Protein Homology CDS 11921 12598 . + 0 ID=cds-PDP48770.1;Parent=gene-CLI77_07760;Dbxref=NCBI_GP:PDP48770.1;Name=PDP48770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809806.1;locus_tag=CLI77_07760;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=PDP48770.1;transl_table=11 NSLS01000027.1 Genbank pseudogene 12630 13540 . + . ID=gene-CLI77_07765;Name=CLI77_07765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07765;pseudo=true NSLS01000027.1 Protein Homology CDS 12630 13540 . + 0 ID=cds-CLI77_07765;Parent=gene-CLI77_07765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874430.1;locus_tag=CLI77_07765;product=ion transporter;pseudo=true;transl_table=11 NSLS01000027.1 Genbank gene 13610 13831 . - . ID=gene-CLI77_07770;Name=CLI77_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07770 NSLS01000027.1 Protein Homology CDS 13610 13831 . - 0 ID=cds-PDP48771.1;Parent=gene-CLI77_07770;Dbxref=NCBI_GP:PDP48771.1;Name=PDP48771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874429.1;locus_tag=CLI77_07770;product=hypothetical protein;protein_id=PDP48771.1;transl_table=11 NSLS01000027.1 Genbank gene 13828 14277 . - . ID=gene-CLI77_07775;Name=CLI77_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07775 NSLS01000027.1 Protein Homology CDS 13828 14277 . - 0 ID=cds-PDP48772.1;Parent=gene-CLI77_07775;Dbxref=NCBI_GP:PDP48772.1;Name=PDP48772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458663.1;locus_tag=CLI77_07775;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP48772.1;transl_table=11 NSLS01000027.1 Genbank gene 14415 14891 . - . ID=gene-CLI77_07780;Name=CLI77_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07780 NSLS01000027.1 Protein Homology CDS 14415 14891 . - 0 ID=cds-PDP48773.1;Parent=gene-CLI77_07780;Dbxref=NCBI_GP:PDP48773.1;Name=PDP48773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583683.1;locus_tag=CLI77_07780;product=histidinol phosphate phosphatase;protein_id=PDP48773.1;transl_table=11 NSLS01000027.1 Genbank gene 15252 15986 . - . ID=gene-CLI77_07785;Name=CLI77_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07785 NSLS01000027.1 Protein Homology CDS 15252 15986 . - 0 ID=cds-PDP48774.1;Parent=gene-CLI77_07785;Dbxref=NCBI_GP:PDP48774.1;Name=PDP48774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583685.1;locus_tag=CLI77_07785;product=hypothetical protein;protein_id=PDP48774.1;transl_table=11 NSLS01000027.1 Genbank gene 16118 17635 . - . ID=gene-CLI77_07790;Name=CLI77_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07790 NSLS01000027.1 Protein Homology CDS 16118 17635 . - 0 ID=cds-PDP48775.1;Parent=gene-CLI77_07790;Dbxref=NCBI_GP:PDP48775.1;Name=PDP48775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583686.1;locus_tag=CLI77_07790;product=thioredoxin family protein;protein_id=PDP48775.1;transl_table=11 NSLS01000027.1 Genbank gene 18016 18156 . + . ID=gene-CLI77_07795;Name=CLI77_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07795 NSLS01000027.1 Protein Homology CDS 18016 18156 . + 0 ID=cds-PDP48776.1;Parent=gene-CLI77_07795;Dbxref=NCBI_GP:PDP48776.1;Name=PDP48776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI77_07795;product=DUF1661 domain-containing protein;protein_id=PDP48776.1;transl_table=11 NSLS01000027.1 Genbank gene 18289 19383 . + . ID=gene-CLI77_07800;Name=CLI77_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07800 NSLS01000027.1 Protein Homology CDS 18289 19383 . + 0 ID=cds-PDP48777.1;Parent=gene-CLI77_07800;Dbxref=NCBI_GP:PDP48777.1;Name=PDP48777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815321.1;locus_tag=CLI77_07800;product=Nif3-like dinuclear metal center hexameric protein;protein_id=PDP48777.1;transl_table=11 NSLS01000027.1 Genbank gene 19401 20156 . + . ID=gene-CLI77_07805;Name=CLI77_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07805 NSLS01000027.1 Protein Homology CDS 19401 20156 . + 0 ID=cds-PDP48778.1;Parent=gene-CLI77_07805;Dbxref=NCBI_GP:PDP48778.1;Name=PDP48778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964486.1;locus_tag=CLI77_07805;product=hypothetical protein;protein_id=PDP48778.1;transl_table=11 NSLS01000027.1 Genbank gene 20420 21784 . + . ID=gene-CLI77_07810;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CLI77_07810 NSLS01000027.1 Protein Homology CDS 20420 21784 . + 0 ID=cds-PDP48779.1;Parent=gene-CLI77_07810;Dbxref=NCBI_GP:PDP48779.1;Name=PDP48779.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874428.1;locus_tag=CLI77_07810;product=tRNA(Ile)-lysidine synthetase;protein_id=PDP48779.1;transl_table=11 NSLS01000027.1 Genbank gene 21779 24064 . - . ID=gene-CLI77_07815;Name=CLI77_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07815 NSLS01000027.1 Protein Homology CDS 21779 24064 . - 0 ID=cds-PDP48780.1;Parent=gene-CLI77_07815;Dbxref=NCBI_GP:PDP48780.1;Name=PDP48780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874431.1;locus_tag=CLI77_07815;product=helicase;protein_id=PDP48780.1;transl_table=11 NSLS01000027.1 Genbank gene 24155 24535 . - . ID=gene-CLI77_07820;Name=CLI77_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07820 NSLS01000027.1 Protein Homology CDS 24155 24535 . - 0 ID=cds-PDP48781.1;Parent=gene-CLI77_07820;Dbxref=NCBI_GP:PDP48781.1;Name=PDP48781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874417.1;locus_tag=CLI77_07820;product=hypothetical protein;protein_id=PDP48781.1;transl_table=11 NSLS01000027.1 Genbank gene 24548 24925 . - . ID=gene-CLI77_07825;Name=CLI77_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07825 NSLS01000027.1 Protein Homology CDS 24548 24925 . - 0 ID=cds-PDP48782.1;Parent=gene-CLI77_07825;Dbxref=NCBI_GP:PDP48782.1;Name=PDP48782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874424.1;locus_tag=CLI77_07825;product=hypothetical protein;protein_id=PDP48782.1;transl_table=11 NSLS01000027.1 Genbank gene 25181 25456 . - . ID=gene-CLI77_07830;Name=CLI77_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07830 NSLS01000027.1 Protein Homology CDS 25181 25456 . - 0 ID=cds-PDP48783.1;Parent=gene-CLI77_07830;Dbxref=NCBI_GP:PDP48783.1;Name=PDP48783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964481.1;locus_tag=CLI77_07830;product=hypothetical protein;protein_id=PDP48783.1;transl_table=11 NSLS01000027.1 Genbank gene 25684 26577 . + . ID=gene-CLI77_07835;Name=CLI77_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07835 NSLS01000027.1 Protein Homology CDS 25684 26577 . + 0 ID=cds-PDP48784.1;Parent=gene-CLI77_07835;Dbxref=NCBI_GP:PDP48784.1;Name=PDP48784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815324.1;locus_tag=CLI77_07835;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=PDP48784.1;transl_table=11 NSLS01000027.1 Genbank gene 26606 27259 . + . ID=gene-CLI77_07840;Name=CLI77_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07840 NSLS01000027.1 Protein Homology CDS 26606 27259 . + 0 ID=cds-PDP48785.1;Parent=gene-CLI77_07840;Dbxref=NCBI_GP:PDP48785.1;Name=PDP48785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874413.1;locus_tag=CLI77_07840;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=PDP48785.1;transl_table=11 NSLS01000027.1 Genbank gene 27365 28036 . - . ID=gene-CLI77_07845;Name=CLI77_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07845 NSLS01000027.1 Protein Homology CDS 27365 28036 . - 0 ID=cds-PDP48786.1;Parent=gene-CLI77_07845;Dbxref=NCBI_GP:PDP48786.1;Name=PDP48786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964478.1;locus_tag=CLI77_07845;product=OmpA family protein;protein_id=PDP48786.1;transl_table=11 NSLS01000027.1 Genbank gene 28102 29082 . - . ID=gene-CLI77_07850;Name=CLI77_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07850 NSLS01000027.1 Protein Homology CDS 28102 29082 . - 0 ID=cds-PDP48787.1;Parent=gene-CLI77_07850;Dbxref=NCBI_GP:PDP48787.1;Name=PDP48787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964477.1;locus_tag=CLI77_07850;product=diguanylate cyclase;protein_id=PDP48787.1;transl_table=11 NSLS01000027.1 Genbank gene 29611 29686 . - . ID=gene-CLI77_07855;Name=CLI77_07855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_07855 NSLS01000027.1 tRNAscan-SE tRNA 29611 29686 . - . ID=rna-CLI77_07855;Parent=gene-CLI77_07855;anticodon=(pos:complement(29651..29653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07855;product=tRNA-Lys NSLS01000027.1 tRNAscan-SE exon 29611 29686 . - . ID=exon-CLI77_07855-1;Parent=rna-CLI77_07855;anticodon=(pos:complement(29651..29653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_07855;product=tRNA-Lys NSLS01000027.1 Genbank gene 29814 30053 . - . ID=gene-CLI77_07860;Name=CLI77_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07860 NSLS01000027.1 Protein Homology CDS 29814 30053 . - 0 ID=cds-PDP48788.1;Parent=gene-CLI77_07860;Dbxref=NCBI_GP:PDP48788.1;Name=PDP48788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965474.1;locus_tag=CLI77_07860;product=hypothetical protein;protein_id=PDP48788.1;transl_table=11 ##sequence-region NSLS01000028.1 1 29625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000028.1 Genbank region 1 29625 . + . ID=NSLS01000028.1:1..29625;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000028.1 Genbank gene 328 1332 . + . ID=gene-CLI77_07865;Name=CLI77_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07865 NSLS01000028.1 Protein Homology CDS 328 1332 . + 0 ID=cds-PDP48715.1;Parent=gene-CLI77_07865;Dbxref=NCBI_GP:PDP48715.1;Name=PDP48715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467514.1;locus_tag=CLI77_07865;product=malate dehydrogenase;protein_id=PDP48715.1;transl_table=11 NSLS01000028.1 Genbank gene 1610 3031 . - . ID=gene-CLI77_07870;Name=CLI77_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07870 NSLS01000028.1 Protein Homology CDS 1610 3031 . - 0 ID=cds-PDP48716.1;Parent=gene-CLI77_07870;Dbxref=NCBI_GP:PDP48716.1;Name=PDP48716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964706.1;locus_tag=CLI77_07870;product=alpha/beta hydrolase;protein_id=PDP48716.1;transl_table=11 NSLS01000028.1 Genbank gene 3056 6526 . - . ID=gene-CLI77_07875;Name=CLI77_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07875 NSLS01000028.1 Protein Homology CDS 3056 6526 . - 0 ID=cds-PDP48717.1;Parent=gene-CLI77_07875;Dbxref=NCBI_GP:PDP48717.1;Name=PDP48717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458585.1;locus_tag=CLI77_07875;product=hypothetical protein;protein_id=PDP48717.1;transl_table=11 NSLS01000028.1 Genbank gene 6519 7325 . - . ID=gene-CLI77_07880;Name=CLI77_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07880 NSLS01000028.1 Protein Homology CDS 6519 7325 . - 0 ID=cds-PDP48718.1;Parent=gene-CLI77_07880;Dbxref=NCBI_GP:PDP48718.1;Name=PDP48718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964708.1;locus_tag=CLI77_07880;product=zinc ABC transporter permease;protein_id=PDP48718.1;transl_table=11 NSLS01000028.1 Genbank gene 7318 7761 . - . ID=gene-CLI77_07885;Name=CLI77_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07885 NSLS01000028.1 Protein Homology CDS 7318 7761 . - 0 ID=cds-PDP48719.1;Parent=gene-CLI77_07885;Dbxref=NCBI_GP:PDP48719.1;Name=PDP48719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583605.1;locus_tag=CLI77_07885;product=phospholipase;protein_id=PDP48719.1;transl_table=11 NSLS01000028.1 Genbank gene 7783 9042 . - . ID=gene-CLI77_07890;Name=CLI77_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07890 NSLS01000028.1 Protein Homology CDS 7783 9042 . - 0 ID=cds-PDP48720.1;Parent=gene-CLI77_07890;Dbxref=NCBI_GP:PDP48720.1;Name=PDP48720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458583.1;locus_tag=CLI77_07890;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=PDP48720.1;transl_table=11 NSLS01000028.1 Genbank gene 9248 10534 . + . ID=gene-CLI77_07895;Name=CLI77_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07895 NSLS01000028.1 Protein Homology CDS 9248 10534 . + 0 ID=cds-PDP48721.1;Parent=gene-CLI77_07895;Dbxref=NCBI_GP:PDP48721.1;Name=PDP48721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815237.1;locus_tag=CLI77_07895;product=hypothetical protein;protein_id=PDP48721.1;transl_table=11 NSLS01000028.1 Genbank pseudogene 10596 10712 . - . ID=gene-CLI77_07900;Name=CLI77_07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_07900;pseudo=true NSLS01000028.1 Protein Homology CDS 10596 10712 . - 0 ID=cds-CLI77_07900;Parent=gene-CLI77_07900;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI77_07900;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000028.1 Genbank gene 11158 11562 . + . ID=gene-CLI77_07905;Name=CLI77_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07905 NSLS01000028.1 Protein Homology CDS 11158 11562 . + 0 ID=cds-PDP48722.1;Parent=gene-CLI77_07905;Dbxref=NCBI_GP:PDP48722.1;Name=PDP48722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853956.1;locus_tag=CLI77_07905;product=30S ribosomal protein S12;protein_id=PDP48722.1;transl_table=11 NSLS01000028.1 Genbank gene 11799 12275 . + . ID=gene-CLI77_07910;Name=CLI77_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07910 NSLS01000028.1 Protein Homology CDS 11799 12275 . + 0 ID=cds-PDP48723.1;Parent=gene-CLI77_07910;Dbxref=NCBI_GP:PDP48723.1;Name=PDP48723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541343.1;locus_tag=CLI77_07910;product=30S ribosomal protein S7;protein_id=PDP48723.1;transl_table=11 NSLS01000028.1 Genbank gene 12288 14411 . + . ID=gene-CLI77_07915;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CLI77_07915 NSLS01000028.1 Protein Homology CDS 12288 14411 . + 0 ID=cds-PDP48724.1;Parent=gene-CLI77_07915;Dbxref=NCBI_GP:PDP48724.1;Name=PDP48724.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149959.1;locus_tag=CLI77_07915;product=elongation factor G;protein_id=PDP48724.1;transl_table=11 NSLS01000028.1 Genbank gene 14427 14732 . + . ID=gene-CLI77_07920;Name=CLI77_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07920 NSLS01000028.1 Protein Homology CDS 14427 14732 . + 0 ID=cds-PDP48725.1;Parent=gene-CLI77_07920;Dbxref=NCBI_GP:PDP48725.1;Name=PDP48725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782187.1;locus_tag=CLI77_07920;product=30S ribosomal protein S10;protein_id=PDP48725.1;transl_table=11 NSLS01000028.1 Genbank gene 14755 15372 . + . ID=gene-CLI77_07925;Name=CLI77_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07925 NSLS01000028.1 Protein Homology CDS 14755 15372 . + 0 ID=cds-PDP48726.1;Parent=gene-CLI77_07925;Dbxref=NCBI_GP:PDP48726.1;Name=PDP48726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224895.1;locus_tag=CLI77_07925;product=50S ribosomal protein L3;protein_id=PDP48726.1;transl_table=11 NSLS01000028.1 Genbank gene 15372 16001 . + . ID=gene-CLI77_07930;Name=CLI77_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07930 NSLS01000028.1 Protein Homology CDS 15372 16001 . + 0 ID=cds-PDP48727.1;Parent=gene-CLI77_07930;Dbxref=NCBI_GP:PDP48727.1;Name=PDP48727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815235.1;locus_tag=CLI77_07930;product=50S ribosomal protein L4;protein_id=PDP48727.1;transl_table=11 NSLS01000028.1 Genbank gene 16016 16309 . + . ID=gene-CLI77_07935;Name=CLI77_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07935 NSLS01000028.1 Protein Homology CDS 16016 16309 . + 0 ID=cds-PDP48728.1;Parent=gene-CLI77_07935;Dbxref=NCBI_GP:PDP48728.1;Name=PDP48728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224897.1;locus_tag=CLI77_07935;product=50S ribosomal protein L23;protein_id=PDP48728.1;transl_table=11 NSLS01000028.1 Genbank gene 16316 17140 . + . ID=gene-CLI77_07940;Name=CLI77_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07940 NSLS01000028.1 Protein Homology CDS 16316 17140 . + 0 ID=cds-PDP48729.1;Parent=gene-CLI77_07940;Dbxref=NCBI_GP:PDP48729.1;Name=PDP48729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853970.1;locus_tag=CLI77_07940;product=50S ribosomal protein L2;protein_id=PDP48729.1;transl_table=11 NSLS01000028.1 Genbank gene 17163 17432 . + . ID=gene-CLI77_07945;Name=CLI77_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07945 NSLS01000028.1 Protein Homology CDS 17163 17432 . + 0 ID=cds-PDP48730.1;Parent=gene-CLI77_07945;Dbxref=NCBI_GP:PDP48730.1;Name=PDP48730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1;locus_tag=CLI77_07945;product=30S ribosomal protein S19;protein_id=PDP48730.1;transl_table=11 NSLS01000028.1 Genbank gene 17487 17891 . + . ID=gene-CLI77_07950;Name=CLI77_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07950 NSLS01000028.1 Protein Homology CDS 17487 17891 . + 0 ID=cds-PDP48731.1;Parent=gene-CLI77_07950;Dbxref=NCBI_GP:PDP48731.1;Name=PDP48731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007559383.1;locus_tag=CLI77_07950;product=50S ribosomal protein L22;protein_id=PDP48731.1;transl_table=11 NSLS01000028.1 Genbank gene 17898 18638 . + . ID=gene-CLI77_07955;Name=CLI77_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07955 NSLS01000028.1 Protein Homology CDS 17898 18638 . + 0 ID=cds-PDP48732.1;Parent=gene-CLI77_07955;Dbxref=NCBI_GP:PDP48732.1;Name=PDP48732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005656540.1;locus_tag=CLI77_07955;product=30S ribosomal protein S3;protein_id=PDP48732.1;transl_table=11 NSLS01000028.1 Genbank gene 18659 19093 . + . ID=gene-CLI77_07960;Name=CLI77_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07960 NSLS01000028.1 Protein Homology CDS 18659 19093 . + 0 ID=cds-PDP48733.1;Parent=gene-CLI77_07960;Dbxref=NCBI_GP:PDP48733.1;Name=PDP48733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275273.1;locus_tag=CLI77_07960;product=50S ribosomal protein L16;protein_id=PDP48733.1;transl_table=11 NSLS01000028.1 Genbank gene 19099 19293 . + . ID=gene-CLI77_07965;Name=CLI77_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07965 NSLS01000028.1 Protein Homology CDS 19099 19293 . + 0 ID=cds-PDP48734.1;Parent=gene-CLI77_07965;Dbxref=NCBI_GP:PDP48734.1;Name=PDP48734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583590.1;locus_tag=CLI77_07965;product=50S ribosomal protein L29;protein_id=PDP48734.1;transl_table=11 NSLS01000028.1 Genbank gene 19307 19561 . + . ID=gene-CLI77_07970;Name=CLI77_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07970 NSLS01000028.1 Protein Homology CDS 19307 19561 . + 0 ID=cds-PDP48735.1;Parent=gene-CLI77_07970;Dbxref=NCBI_GP:PDP48735.1;Name=PDP48735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016660790.1;locus_tag=CLI77_07970;product=30S ribosomal protein S17;protein_id=PDP48735.1;transl_table=11 NSLS01000028.1 Genbank gene 19563 19928 . + . ID=gene-CLI77_07975;Name=CLI77_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07975 NSLS01000028.1 Protein Homology CDS 19563 19928 . + 0 ID=cds-PDP48736.1;Parent=gene-CLI77_07975;Dbxref=NCBI_GP:PDP48736.1;Name=PDP48736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318509.1;locus_tag=CLI77_07975;product=50S ribosomal protein L14;protein_id=PDP48736.1;transl_table=11 NSLS01000028.1 Genbank gene 19951 20271 . + . ID=gene-CLI77_07980;Name=CLI77_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07980 NSLS01000028.1 Protein Homology CDS 19951 20271 . + 0 ID=cds-PDP48737.1;Parent=gene-CLI77_07980;Dbxref=NCBI_GP:PDP48737.1;Name=PDP48737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101447.1;locus_tag=CLI77_07980;product=50S ribosomal protein L24;protein_id=PDP48737.1;transl_table=11 NSLS01000028.1 Genbank gene 20271 20831 . + . ID=gene-CLI77_07985;Name=CLI77_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07985 NSLS01000028.1 Protein Homology CDS 20271 20831 . + 0 ID=cds-PDP48738.1;Parent=gene-CLI77_07985;Dbxref=NCBI_GP:PDP48738.1;Name=PDP48738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432221.1;locus_tag=CLI77_07985;product=50S ribosomal protein L5;protein_id=PDP48738.1;transl_table=11 NSLS01000028.1 Genbank gene 20833 21102 . + . ID=gene-CLI77_07990;Name=CLI77_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07990 NSLS01000028.1 Protein Homology CDS 20833 21102 . + 0 ID=cds-PDP48739.1;Parent=gene-CLI77_07990;Dbxref=NCBI_GP:PDP48739.1;Name=PDP48739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010251725.1;locus_tag=CLI77_07990;product=30S ribosomal protein S14;protein_id=PDP48739.1;transl_table=11 NSLS01000028.1 Genbank gene 21153 21548 . + . ID=gene-CLI77_07995;Name=CLI77_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_07995 NSLS01000028.1 Protein Homology CDS 21153 21548 . + 0 ID=cds-PDP48740.1;Parent=gene-CLI77_07995;Dbxref=NCBI_GP:PDP48740.1;Name=PDP48740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782213.1;locus_tag=CLI77_07995;product=30S ribosomal protein S8;protein_id=PDP48740.1;transl_table=11 NSLS01000028.1 Genbank gene 21567 22118 . + . ID=gene-CLI77_08000;Name=CLI77_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08000 NSLS01000028.1 Protein Homology CDS 21567 22118 . + 0 ID=cds-PDP48741.1;Parent=gene-CLI77_08000;Dbxref=NCBI_GP:PDP48741.1;Name=PDP48741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859534.1;locus_tag=CLI77_08000;product=50S ribosomal protein L6;protein_id=PDP48741.1;transl_table=11 NSLS01000028.1 Genbank gene 22137 22481 . + . ID=gene-CLI77_08005;Name=CLI77_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08005 NSLS01000028.1 Protein Homology CDS 22137 22481 . + 0 ID=cds-PDP48742.1;Parent=gene-CLI77_08005;Dbxref=NCBI_GP:PDP48742.1;Name=PDP48742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634763.1;locus_tag=CLI77_08005;product=50S ribosomal protein L18;protein_id=PDP48742.1;transl_table=11 NSLS01000028.1 Genbank gene 22487 23005 . + . ID=gene-CLI77_08010;Name=CLI77_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08010 NSLS01000028.1 Protein Homology CDS 22487 23005 . + 0 ID=cds-PDP48743.1;Parent=gene-CLI77_08010;Dbxref=NCBI_GP:PDP48743.1;Name=PDP48743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811622.1;locus_tag=CLI77_08010;product=30S ribosomal protein S5;protein_id=PDP48743.1;transl_table=11 NSLS01000028.1 Genbank gene 23025 23201 . + . ID=gene-CLI77_08015;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CLI77_08015 NSLS01000028.1 Protein Homology CDS 23025 23201 . + 0 ID=cds-PDP48744.1;Parent=gene-CLI77_08015;Dbxref=NCBI_GP:PDP48744.1;Name=PDP48744.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101440.1;locus_tag=CLI77_08015;product=50S ribosomal protein L30;protein_id=PDP48744.1;transl_table=11 NSLS01000028.1 Genbank gene 23227 23673 . + . ID=gene-CLI77_08020;Name=CLI77_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08020 NSLS01000028.1 Protein Homology CDS 23227 23673 . + 0 ID=cds-PDP48745.1;Parent=gene-CLI77_08020;Dbxref=NCBI_GP:PDP48745.1;Name=PDP48745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667878.1;locus_tag=CLI77_08020;product=50S ribosomal protein L15;protein_id=PDP48745.1;transl_table=11 NSLS01000028.1 Genbank gene 23678 25018 . + . ID=gene-CLI77_08025;Name=CLI77_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08025 NSLS01000028.1 Protein Homology CDS 23678 25018 . + 0 ID=cds-PDP48746.1;Parent=gene-CLI77_08025;Dbxref=NCBI_GP:PDP48746.1;Name=PDP48746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007365553.1;locus_tag=CLI77_08025;product=preprotein translocase subunit SecY;protein_id=PDP48746.1;transl_table=11 NSLS01000028.1 Genbank gene 25018 25803 . + . ID=gene-CLI77_08030;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CLI77_08030 NSLS01000028.1 Protein Homology CDS 25018 25803 . + 0 ID=cds-PDP48747.1;Parent=gene-CLI77_08030;Dbxref=NCBI_GP:PDP48747.1;Name=PDP48747.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956440.1;locus_tag=CLI77_08030;product=type I methionyl aminopeptidase;protein_id=PDP48747.1;transl_table=11 NSLS01000028.1 Genbank gene 25806 26024 . + . ID=gene-CLI77_08035;Name=CLI77_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08035 NSLS01000028.1 Protein Homology CDS 25806 26024 . + 0 ID=cds-PDP48748.1;Parent=gene-CLI77_08035;Dbxref=NCBI_GP:PDP48748.1;Name=PDP48748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018109212.1;locus_tag=CLI77_08035;product=translation initiation factor IF-1;protein_id=PDP48748.1;transl_table=11 NSLS01000028.1 Genbank gene 26041 26157 . + . ID=gene-CLI77_08040;Name=CLI77_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08040 NSLS01000028.1 Protein Homology CDS 26041 26157 . + 0 ID=cds-PDP48749.1;Parent=gene-CLI77_08040;Dbxref=NCBI_GP:PDP48749.1;Name=PDP48749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=CLI77_08040;product=50S ribosomal protein L36;protein_id=PDP48749.1;transl_table=11 NSLS01000028.1 Genbank gene 26190 26570 . + . ID=gene-CLI77_08045;Name=CLI77_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08045 NSLS01000028.1 Protein Homology CDS 26190 26570 . + 0 ID=cds-PDP48750.1;Parent=gene-CLI77_08045;Dbxref=NCBI_GP:PDP48750.1;Name=PDP48750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1;locus_tag=CLI77_08045;product=30S ribosomal protein S13;protein_id=PDP48750.1;transl_table=11 NSLS01000028.1 Genbank gene 26582 26968 . + . ID=gene-CLI77_08050;Name=CLI77_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08050 NSLS01000028.1 Protein Homology CDS 26582 26968 . + 0 ID=cds-PDP48751.1;Parent=gene-CLI77_08050;Dbxref=NCBI_GP:PDP48751.1;Name=PDP48751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007567382.1;locus_tag=CLI77_08050;product=30S ribosomal protein S11;protein_id=PDP48751.1;transl_table=11 NSLS01000028.1 Genbank gene 27127 27732 . + . ID=gene-CLI77_08055;Name=CLI77_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08055 NSLS01000028.1 Protein Homology CDS 27127 27732 . + 0 ID=cds-PDP48752.1;Parent=gene-CLI77_08055;Dbxref=NCBI_GP:PDP48752.1;Name=PDP48752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667875.1;locus_tag=CLI77_08055;product=30S ribosomal protein S4;protein_id=PDP48752.1;transl_table=11 NSLS01000028.1 Genbank gene 27745 28737 . + . ID=gene-CLI77_08060;Name=CLI77_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08060 NSLS01000028.1 Protein Homology CDS 27745 28737 . + 0 ID=cds-PDP48753.1;Parent=gene-CLI77_08060;Dbxref=NCBI_GP:PDP48753.1;Name=PDP48753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964728.1;locus_tag=CLI77_08060;product=DNA-directed RNA polymerase subunit alpha;protein_id=PDP48753.1;transl_table=11 NSLS01000028.1 Genbank gene 28743 29225 . + . ID=gene-CLI77_08065;Name=CLI77_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08065 NSLS01000028.1 Protein Homology CDS 28743 29225 . + 0 ID=cds-PDP48754.1;Parent=gene-CLI77_08065;Dbxref=NCBI_GP:PDP48754.1;Name=PDP48754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873882.1;locus_tag=CLI77_08065;product=50S ribosomal protein L17;protein_id=PDP48754.1;transl_table=11 NSLS01000028.1 Genbank gene 29277 29579 . + . ID=gene-CLI77_08070;Name=CLI77_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08070 NSLS01000028.1 Protein Homology CDS 29277 29579 . + 0 ID=cds-PDP48755.1;Parent=gene-CLI77_08070;Dbxref=NCBI_GP:PDP48755.1;Name=PDP48755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815745.1;locus_tag=CLI77_08070;product=hypothetical protein;protein_id=PDP48755.1;transl_table=11 ##sequence-region NSLS01000029.1 1 28857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000029.1 Genbank region 1 28857 . + . ID=NSLS01000029.1:1..28857;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000029.1 Genbank gene 456 932 . - . ID=gene-CLI77_08075;Name=CLI77_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08075 NSLS01000029.1 Protein Homology CDS 456 932 . - 0 ID=cds-PDP48683.1;Parent=gene-CLI77_08075;Dbxref=NCBI_GP:PDP48683.1;Name=PDP48683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583476.1;locus_tag=CLI77_08075;product=ATPase;protein_id=PDP48683.1;transl_table=11 NSLS01000029.1 Genbank gene 987 2801 . - . ID=gene-CLI77_08080;Name=CLI77_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08080 NSLS01000029.1 Protein Homology CDS 987 2801 . - 0 ID=cds-PDP48684.1;Parent=gene-CLI77_08080;Dbxref=NCBI_GP:PDP48684.1;Name=PDP48684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815157.1;locus_tag=CLI77_08080;product=ATPase;protein_id=PDP48684.1;transl_table=11 NSLS01000029.1 Genbank gene 2798 3412 . - . ID=gene-CLI77_08085;Name=CLI77_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08085 NSLS01000029.1 Protein Homology CDS 2798 3412 . - 0 ID=cds-PDP48685.1;Parent=gene-CLI77_08085;Dbxref=NCBI_GP:PDP48685.1;Name=PDP48685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583478.1;locus_tag=CLI77_08085;product=V-type ATP synthase subunit D;protein_id=PDP48685.1;transl_table=11 NSLS01000029.1 Genbank gene 3428 4747 . - . ID=gene-CLI77_08090;Name=CLI77_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08090 NSLS01000029.1 Protein Homology CDS 3428 4747 . - 0 ID=cds-PDP48686.1;Parent=gene-CLI77_08090;Dbxref=NCBI_GP:PDP48686.1;Name=PDP48686.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007560284.1;locus_tag=CLI77_08090;product=V-type ATP synthase subunit B;protein_id=PDP48686.1;transl_table=11 NSLS01000029.1 Genbank gene 4759 6513 . - . ID=gene-CLI77_08095;Name=CLI77_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08095 NSLS01000029.1 Protein Homology CDS 4759 6513 . - 0 ID=cds-PDP48687.1;Parent=gene-CLI77_08095;Dbxref=NCBI_GP:PDP48687.1;Name=PDP48687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857371.1;locus_tag=CLI77_08095;product=ATP synthase subunit A;protein_id=PDP48687.1;transl_table=11 NSLS01000029.1 Genbank gene 6523 7461 . - . ID=gene-CLI77_08100;Name=CLI77_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08100 NSLS01000029.1 Protein Homology CDS 6523 7461 . - 0 ID=cds-PDP48688.1;Parent=gene-CLI77_08100;Dbxref=NCBI_GP:PDP48688.1;Name=PDP48688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965749.1;locus_tag=CLI77_08100;product=DUF2764 domain-containing protein;protein_id=PDP48688.1;transl_table=11 NSLS01000029.1 Genbank gene 7465 8055 . - . ID=gene-CLI77_08105;Name=CLI77_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08105 NSLS01000029.1 Protein Homology CDS 7465 8055 . - 0 ID=cds-PDP48689.1;Parent=gene-CLI77_08105;Dbxref=NCBI_GP:PDP48689.1;Name=PDP48689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815158.1;locus_tag=CLI77_08105;product=hypothetical protein;protein_id=PDP48689.1;transl_table=11 NSLS01000029.1 Genbank pseudogene 8246 8481 . - . ID=gene-CLI77_08110;Name=CLI77_08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08110;pseudo=true NSLS01000029.1 Protein Homology CDS 8246 8481 . - 0 ID=cds-CLI77_08110;Parent=gene-CLI77_08110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458514.1;locus_tag=CLI77_08110;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000029.1 Genbank gene 8785 10002 . + . ID=gene-CLI77_08115;Name=CLI77_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08115 NSLS01000029.1 Protein Homology CDS 8785 10002 . + 0 ID=cds-PDP48690.1;Parent=gene-CLI77_08115;Dbxref=NCBI_GP:PDP48690.1;Name=PDP48690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815161.1;locus_tag=CLI77_08115;product=secretion protein;protein_id=PDP48690.1;transl_table=11 NSLS01000029.1 Genbank gene 10082 12967 . - . ID=gene-CLI77_08120;Name=CLI77_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08120 NSLS01000029.1 Protein Homology CDS 10082 12967 . - 0 ID=cds-PDP48691.1;Parent=gene-CLI77_08120;Dbxref=NCBI_GP:PDP48691.1;Name=PDP48691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956408.1;locus_tag=CLI77_08120;product=ATPase;protein_id=PDP48691.1;transl_table=11 NSLS01000029.1 Genbank gene 13253 14074 . + . ID=gene-CLI77_08125;Name=CLI77_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08125 NSLS01000029.1 Protein Homology CDS 13253 14074 . + 0 ID=cds-PDP48692.1;Parent=gene-CLI77_08125;Dbxref=NCBI_GP:PDP48692.1;Name=PDP48692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874140.1;locus_tag=CLI77_08125;product=hypothetical protein;protein_id=PDP48692.1;transl_table=11 NSLS01000029.1 Genbank gene 14221 17001 . - . ID=gene-CLI77_08130;Name=CLI77_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08130 NSLS01000029.1 Protein Homology CDS 14221 17001 . - 0 ID=cds-PDP48693.1;Parent=gene-CLI77_08130;Dbxref=NCBI_GP:PDP48693.1;Name=PDP48693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964742.1;locus_tag=CLI77_08130;product=DNA polymerase I;protein_id=PDP48693.1;transl_table=11 NSLS01000029.1 Genbank gene 17051 19057 . - . ID=gene-CLI77_08135;Name=CLI77_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08135 NSLS01000029.1 Protein Homology CDS 17051 19057 . - 0 ID=cds-PDP48694.1;Parent=gene-CLI77_08135;Dbxref=NCBI_GP:PDP48694.1;Name=PDP48694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874136.1;locus_tag=CLI77_08135;product=1%2C4-alpha-glucan-branching enzyme;protein_id=PDP48694.1;transl_table=11 NSLS01000029.1 Genbank gene 19054 21357 . - . ID=gene-CLI77_08140;Name=CLI77_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08140 NSLS01000029.1 Protein Homology CDS 19054 21357 . - 0 ID=cds-PDP48695.1;Parent=gene-CLI77_08140;Dbxref=NCBI_GP:PDP48695.1;Name=PDP48695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874137.1;locus_tag=CLI77_08140;product=sodium:proton antiporter;protein_id=PDP48695.1;transl_table=11 NSLS01000029.1 Genbank gene 21910 22125 . + . ID=gene-CLI77_08145;Name=CLI77_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08145 NSLS01000029.1 Protein Homology CDS 21910 22125 . + 0 ID=cds-PDP48696.1;Parent=gene-CLI77_08145;Dbxref=NCBI_GP:PDP48696.1;Name=PDP48696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458522.1;locus_tag=CLI77_08145;product=hypothetical protein;protein_id=PDP48696.1;transl_table=11 NSLS01000029.1 Genbank gene 22122 23606 . + . ID=gene-CLI77_08150;Name=CLI77_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08150 NSLS01000029.1 Protein Homology CDS 22122 23606 . + 0 ID=cds-PDP48697.1;Parent=gene-CLI77_08150;Dbxref=NCBI_GP:PDP48697.1;Name=PDP48697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583508.1;locus_tag=CLI77_08150;product=DUF3943 domain-containing protein;protein_id=PDP48697.1;transl_table=11 NSLS01000029.1 Genbank gene 23623 25659 . + . ID=gene-CLI77_08155;Name=CLI77_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08155 NSLS01000029.1 Protein Homology CDS 23623 25659 . + 0 ID=cds-PDP48698.1;Parent=gene-CLI77_08155;Dbxref=NCBI_GP:PDP48698.1;Name=PDP48698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815171.1;locus_tag=CLI77_08155;product=dipeptidyl carboxypeptidase II;protein_id=PDP48698.1;transl_table=11 NSLS01000029.1 Genbank gene 25779 26981 . - . ID=gene-CLI77_08160;Name=CLI77_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08160 NSLS01000029.1 Protein Homology CDS 25779 26981 . - 0 ID=cds-PDP48699.1;Parent=gene-CLI77_08160;Dbxref=NCBI_GP:PDP48699.1;Name=PDP48699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964538.1;locus_tag=CLI77_08160;product=aminopeptidase;protein_id=PDP48699.1;transl_table=11 NSLS01000029.1 Genbank gene 27155 27364 . - . ID=gene-CLI77_08165;Name=CLI77_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08165 NSLS01000029.1 Protein Homology CDS 27155 27364 . - 0 ID=cds-PDP48700.1;Parent=gene-CLI77_08165;Dbxref=NCBI_GP:PDP48700.1;Name=PDP48700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457450.1;locus_tag=CLI77_08165;product=hypothetical protein;protein_id=PDP48700.1;transl_table=11 NSLS01000029.1 Genbank gene 27361 27567 . - . ID=gene-CLI77_08170;Name=CLI77_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08170 NSLS01000029.1 Protein Homology CDS 27361 27567 . - 0 ID=cds-PDP48701.1;Parent=gene-CLI77_08170;Dbxref=NCBI_GP:PDP48701.1;Name=PDP48701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585023.1;locus_tag=CLI77_08170;product=hypothetical protein;protein_id=PDP48701.1;transl_table=11 NSLS01000029.1 Genbank gene 27554 27715 . - . ID=gene-CLI77_08175;Name=CLI77_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08175 NSLS01000029.1 Protein Homology CDS 27554 27715 . - 0 ID=cds-PDP48702.1;Parent=gene-CLI77_08175;Dbxref=NCBI_GP:PDP48702.1;Name=PDP48702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_08175;product=DNA methylase;protein_id=PDP48702.1;transl_table=11 NSLS01000029.1 Genbank gene 27728 28813 . - . ID=gene-CLI77_08180;Name=CLI77_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08180 NSLS01000029.1 Protein Homology CDS 27728 28813 . - 0 ID=cds-PDP48703.1;Parent=gene-CLI77_08180;Dbxref=NCBI_GP:PDP48703.1;Name=PDP48703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_08180;product=IS5/IS1182 family transposase;protein_id=PDP48703.1;transl_table=11 ##sequence-region NSLS01000002.1 1 110876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000002.1 Genbank region 1 110876 . + . ID=NSLS01000002.1:1..110876;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000002.1 Genbank gene 190 372 . - . ID=gene-CLI77_01270;Name=CLI77_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01270 NSLS01000002.1 Protein Homology CDS 190 372 . - 0 ID=cds-PDP50278.1;Parent=gene-CLI77_01270;Dbxref=NCBI_GP:PDP50278.1;Name=PDP50278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815535.1;locus_tag=CLI77_01270;product=hypothetical protein;protein_id=PDP50278.1;transl_table=11 NSLS01000002.1 Genbank gene 711 2291 . + . ID=gene-CLI77_01275;Name=CLI77_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01275 NSLS01000002.1 Protein Homology CDS 711 2291 . + 0 ID=cds-PDP50279.1;Parent=gene-CLI77_01275;Dbxref=NCBI_GP:PDP50279.1;Name=PDP50279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866938.1;locus_tag=CLI77_01275;product=peptide chain release factor 3;protein_id=PDP50279.1;transl_table=11 NSLS01000002.1 Genbank gene 2324 2542 . + . ID=gene-CLI77_01280;Name=CLI77_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01280 NSLS01000002.1 Protein Homology CDS 2324 2542 . + 0 ID=cds-PDP50280.1;Parent=gene-CLI77_01280;Dbxref=NCBI_GP:PDP50280.1;Name=PDP50280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583844.1;locus_tag=CLI77_01280;product=hypothetical protein;protein_id=PDP50280.1;transl_table=11 NSLS01000002.1 Genbank gene 2593 3300 . + . ID=gene-CLI77_01285;Name=CLI77_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01285 NSLS01000002.1 Protein Homology CDS 2593 3300 . + 0 ID=cds-PDP50281.1;Parent=gene-CLI77_01285;Dbxref=NCBI_GP:PDP50281.1;Name=PDP50281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815438.1;locus_tag=CLI77_01285;product=DUF4271 domain-containing protein;protein_id=PDP50281.1;transl_table=11 NSLS01000002.1 Genbank gene 3291 4037 . + . ID=gene-CLI77_01290;Name=CLI77_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01290 NSLS01000002.1 Protein Homology CDS 3291 4037 . + 0 ID=cds-PDP50282.1;Parent=gene-CLI77_01290;Dbxref=NCBI_GP:PDP50282.1;Name=PDP50282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583842.1;locus_tag=CLI77_01290;product=uroporphyrinogen-III synthase;protein_id=PDP50282.1;transl_table=11 NSLS01000002.1 Genbank gene 4034 4447 . + . ID=gene-CLI77_01295;Name=CLI77_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01295 NSLS01000002.1 Protein Homology CDS 4034 4447 . + 0 ID=cds-PDP50283.1;Parent=gene-CLI77_01295;Dbxref=NCBI_GP:PDP50283.1;Name=PDP50283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457414.1;locus_tag=CLI77_01295;product=ribonuclease P protein component;protein_id=PDP50283.1;transl_table=11 NSLS01000002.1 Genbank gene 4453 4683 . + . ID=gene-CLI77_01300;Name=CLI77_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01300 NSLS01000002.1 Protein Homology CDS 4453 4683 . + 0 ID=cds-PDP50284.1;Parent=gene-CLI77_01300;Dbxref=NCBI_GP:PDP50284.1;Name=PDP50284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583840.1;locus_tag=CLI77_01300;product=membrane protein insertion efficiency factor YidD;protein_id=PDP50284.1;transl_table=11 NSLS01000002.1 Genbank gene 4667 5380 . + . ID=gene-CLI77_01305;Name=CLI77_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01305 NSLS01000002.1 Protein Homology CDS 4667 5380 . + 0 ID=cds-PDP50285.1;Parent=gene-CLI77_01305;Dbxref=NCBI_GP:PDP50285.1;Name=PDP50285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815436.1;locus_tag=CLI77_01305;product=hydrolase TatD;protein_id=PDP50285.1;transl_table=11 NSLS01000002.1 Genbank gene 5333 5872 . - . ID=gene-CLI77_01310;Name=CLI77_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01310 NSLS01000002.1 Protein Homology CDS 5333 5872 . - 0 ID=cds-PDP50286.1;Parent=gene-CLI77_01310;Dbxref=NCBI_GP:PDP50286.1;Name=PDP50286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955950.1;locus_tag=CLI77_01310;product=DUF805 domain-containing protein;protein_id=PDP50286.1;transl_table=11 NSLS01000002.1 Genbank gene 6200 6475 . - . ID=gene-CLI77_01315;Name=CLI77_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01315 NSLS01000002.1 Protein Homology CDS 6200 6475 . - 0 ID=cds-PDP50287.1;Parent=gene-CLI77_01315;Dbxref=NCBI_GP:PDP50287.1;Name=PDP50287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585023.1;locus_tag=CLI77_01315;product=hypothetical protein;protein_id=PDP50287.1;transl_table=11 NSLS01000002.1 Genbank gene 6715 6897 . - . ID=gene-CLI77_01320;Name=CLI77_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01320 NSLS01000002.1 Protein Homology CDS 6715 6897 . - 0 ID=cds-PDP50288.1;Parent=gene-CLI77_01320;Dbxref=NCBI_GP:PDP50288.1;Name=PDP50288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815489.1;locus_tag=CLI77_01320;product=hypothetical protein;protein_id=PDP50288.1;transl_table=11 NSLS01000002.1 Genbank gene 7142 9967 . - . ID=gene-CLI77_01325;Name=CLI77_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01325 NSLS01000002.1 Protein Homology CDS 7142 9967 . - 0 ID=cds-PDP50289.1;Parent=gene-CLI77_01325;Dbxref=NCBI_GP:PDP50289.1;Name=PDP50289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815430.1;locus_tag=CLI77_01325;product=peptidase M16;protein_id=PDP50289.1;transl_table=11 NSLS01000002.1 Genbank gene 10245 10823 . - . ID=gene-CLI77_01330;Name=CLI77_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01330 NSLS01000002.1 Protein Homology CDS 10245 10823 . - 0 ID=cds-PDP50290.1;Parent=gene-CLI77_01330;Dbxref=NCBI_GP:PDP50290.1;Name=PDP50290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146779.1;locus_tag=CLI77_01330;product=rubrerythrin family protein;protein_id=PDP50290.1;transl_table=11 NSLS01000002.1 Genbank gene 10816 11082 . - . ID=gene-CLI77_01335;Name=CLI77_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01335 NSLS01000002.1 GeneMarkS+ CDS 10816 11082 . - 0 ID=cds-PDP50291.1;Parent=gene-CLI77_01335;Dbxref=NCBI_GP:PDP50291.1;Name=PDP50291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_01335;product=hypothetical protein;protein_id=PDP50291.1;transl_table=11 NSLS01000002.1 Genbank gene 11152 11643 . - . ID=gene-CLI77_01340;Name=CLI77_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01340 NSLS01000002.1 Protein Homology CDS 11152 11643 . - 0 ID=cds-PDP50292.1;Parent=gene-CLI77_01340;Dbxref=NCBI_GP:PDP50292.1;Name=PDP50292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583835.1;locus_tag=CLI77_01340;product=hypothetical protein;protein_id=PDP50292.1;transl_table=11 NSLS01000002.1 Genbank gene 11678 12202 . - . ID=gene-CLI77_01345;Name=CLI77_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01345 NSLS01000002.1 Protein Homology CDS 11678 12202 . - 0 ID=cds-PDP50293.1;Parent=gene-CLI77_01345;Dbxref=NCBI_GP:PDP50293.1;Name=PDP50293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457407.1;locus_tag=CLI77_01345;product=hypothetical protein;protein_id=PDP50293.1;transl_table=11 NSLS01000002.1 Genbank gene 12259 14934 . - . ID=gene-CLI77_01350;Name=CLI77_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01350 NSLS01000002.1 Protein Homology CDS 12259 14934 . - 0 ID=cds-PDP50294.1;Parent=gene-CLI77_01350;Dbxref=NCBI_GP:PDP50294.1;Name=PDP50294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457406.1;locus_tag=CLI77_01350;product=outer membrane protein assembly factor BamA;protein_id=PDP50294.1;transl_table=11 NSLS01000002.1 Genbank gene 14952 15716 . - . ID=gene-CLI77_01355;Name=CLI77_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01355 NSLS01000002.1 Protein Homology CDS 14952 15716 . - 0 ID=cds-PDP50295.1;Parent=gene-CLI77_01355;Dbxref=NCBI_GP:PDP50295.1;Name=PDP50295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815429.1;locus_tag=CLI77_01355;product=isoprenyl transferase;protein_id=PDP50295.1;transl_table=11 NSLS01000002.1 Genbank gene 15794 16501 . - . ID=gene-CLI77_01360;Name=CLI77_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01360 NSLS01000002.1 Protein Homology CDS 15794 16501 . - 0 ID=cds-PDP50296.1;Parent=gene-CLI77_01360;Dbxref=NCBI_GP:PDP50296.1;Name=PDP50296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815428.1;locus_tag=CLI77_01360;product=hypothetical protein;protein_id=PDP50296.1;transl_table=11 NSLS01000002.1 Genbank gene 16488 17858 . - . ID=gene-CLI77_01365;Name=CLI77_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01365 NSLS01000002.1 Protein Homology CDS 16488 17858 . - 0 ID=cds-PDP50297.1;Parent=gene-CLI77_01365;Dbxref=NCBI_GP:PDP50297.1;Name=PDP50297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965925.1;locus_tag=CLI77_01365;product=hypothetical protein;protein_id=PDP50297.1;transl_table=11 NSLS01000002.1 Genbank gene 18075 19580 . - . ID=gene-CLI77_01370;Name=CLI77_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01370 NSLS01000002.1 Protein Homology CDS 18075 19580 . - 0 ID=cds-PDP50298.1;Parent=gene-CLI77_01370;Dbxref=NCBI_GP:PDP50298.1;Name=PDP50298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9;locus_tag=CLI77_01370;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP50298.1;transl_table=11 NSLS01000002.1 Genbank gene 19605 22745 . - . ID=gene-CLI77_01375;Name=CLI77_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01375 NSLS01000002.1 Protein Homology CDS 19605 22745 . - 0 ID=cds-PDP50299.1;Parent=gene-CLI77_01375;Dbxref=NCBI_GP:PDP50299.1;Name=PDP50299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874718.1;locus_tag=CLI77_01375;product=SusC/RagA family TonB-linked outer membrane protein;protein_id=PDP50299.1;transl_table=11 NSLS01000002.1 Genbank gene 23693 30307 . - . ID=gene-CLI77_01380;Name=CLI77_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01380 NSLS01000002.1 Protein Homology CDS 23693 30307 . - 0 ID=cds-PDP50300.1;Parent=gene-CLI77_01380;Dbxref=NCBI_GP:PDP50300.1;Name=PDP50300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457399.1;locus_tag=CLI77_01380;product=hypothetical protein;protein_id=PDP50300.1;transl_table=11 NSLS01000002.1 Genbank gene 30504 34184 . - . ID=gene-CLI77_01385;Name=CLI77_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01385 NSLS01000002.1 Protein Homology CDS 30504 34184 . - 0 ID=cds-PDP50366.1;Parent=gene-CLI77_01385;Dbxref=NCBI_GP:PDP50366.1;Name=PDP50366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955943.1;locus_tag=CLI77_01385;product=VWA domain-containing protein;protein_id=PDP50366.1;transl_table=11 NSLS01000002.1 Genbank gene 34334 35341 . - . ID=gene-CLI77_01390;Name=CLI77_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01390 NSLS01000002.1 Protein Homology CDS 34334 35341 . - 0 ID=cds-PDP50301.1;Parent=gene-CLI77_01390;Dbxref=NCBI_GP:PDP50301.1;Name=PDP50301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875055.1;locus_tag=CLI77_01390;product=fimbrial assembly protein;protein_id=PDP50301.1;transl_table=11 NSLS01000002.1 Genbank gene 35351 36688 . - . ID=gene-CLI77_01395;Name=CLI77_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01395 NSLS01000002.1 Protein Homology CDS 35351 36688 . - 0 ID=cds-PDP50302.1;Parent=gene-CLI77_01395;Dbxref=NCBI_GP:PDP50302.1;Name=PDP50302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875053.1;locus_tag=CLI77_01395;product=fimbrial assembly protein;protein_id=PDP50302.1;transl_table=11 NSLS01000002.1 Genbank gene 36875 37831 . - . ID=gene-CLI77_01400;Name=CLI77_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01400 NSLS01000002.1 Protein Homology CDS 36875 37831 . - 0 ID=cds-PDP50303.1;Parent=gene-CLI77_01400;Dbxref=NCBI_GP:PDP50303.1;Name=PDP50303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583821.1;locus_tag=CLI77_01400;product=fimbrial protein;protein_id=PDP50303.1;transl_table=11 NSLS01000002.1 Genbank gene 37946 39421 . - . ID=gene-CLI77_01405;Name=CLI77_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01405 NSLS01000002.1 Protein Homology CDS 37946 39421 . - 0 ID=cds-PDP50367.1;Parent=gene-CLI77_01405;Dbxref=NCBI_GP:PDP50367.1;Name=PDP50367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583820.1;locus_tag=CLI77_01405;product=fimbrial assembly protein;protein_id=PDP50367.1;transl_table=11 NSLS01000002.1 Genbank gene 40471 43287 . + . ID=gene-CLI77_01410;Name=CLI77_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01410 NSLS01000002.1 Protein Homology CDS 40471 43287 . + 0 ID=cds-PDP50304.1;Parent=gene-CLI77_01410;Dbxref=NCBI_GP:PDP50304.1;Name=PDP50304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955940.1;locus_tag=CLI77_01410;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=PDP50304.1;transl_table=11 NSLS01000002.1 Genbank gene 43358 43711 . + . ID=gene-CLI77_01415;Name=CLI77_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01415 NSLS01000002.1 Protein Homology CDS 43358 43711 . + 0 ID=cds-PDP50368.1;Parent=gene-CLI77_01415;Dbxref=NCBI_GP:PDP50368.1;Name=PDP50368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457393.1;locus_tag=CLI77_01415;product=DNA-binding protein;protein_id=PDP50368.1;transl_table=11 NSLS01000002.1 Genbank gene 43774 44556 . - . ID=gene-CLI77_01420;Name=CLI77_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01420 NSLS01000002.1 Protein Homology CDS 43774 44556 . - 0 ID=cds-PDP50305.1;Parent=gene-CLI77_01420;Dbxref=NCBI_GP:PDP50305.1;Name=PDP50305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965260.1;locus_tag=CLI77_01420;product=DNA polymerase III subunit epsilon;protein_id=PDP50305.1;transl_table=11 NSLS01000002.1 Genbank gene 44553 46325 . - . ID=gene-CLI77_01425;Name=CLI77_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01425 NSLS01000002.1 Protein Homology CDS 44553 46325 . - 0 ID=cds-PDP50306.1;Parent=gene-CLI77_01425;Dbxref=NCBI_GP:PDP50306.1;Name=PDP50306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875290.1;locus_tag=CLI77_01425;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PDP50306.1;transl_table=11 NSLS01000002.1 Genbank gene 46355 48397 . - . ID=gene-CLI77_01430;Name=CLI77_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01430 NSLS01000002.1 Protein Homology CDS 46355 48397 . - 0 ID=cds-PDP50307.1;Parent=gene-CLI77_01430;Dbxref=NCBI_GP:PDP50307.1;Name=PDP50307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811845.1;locus_tag=CLI77_01430;product=methionine--tRNA ligase;protein_id=PDP50307.1;transl_table=11 NSLS01000002.1 Genbank gene 48532 48837 . + . ID=gene-CLI77_01435;Name=CLI77_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01435 NSLS01000002.1 Protein Homology CDS 48532 48837 . + 0 ID=cds-PDP50308.1;Parent=gene-CLI77_01435;Dbxref=NCBI_GP:PDP50308.1;Name=PDP50308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815414.1;locus_tag=CLI77_01435;product=hypothetical protein;protein_id=PDP50308.1;transl_table=11 NSLS01000002.1 Genbank gene 49006 49584 . + . ID=gene-CLI77_01440;Name=CLI77_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01440 NSLS01000002.1 Protein Homology CDS 49006 49584 . + 0 ID=cds-PDP50309.1;Parent=gene-CLI77_01440;Dbxref=NCBI_GP:PDP50309.1;Name=PDP50309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875353.1;locus_tag=CLI77_01440;product=50S ribosomal protein L25;protein_id=PDP50309.1;transl_table=11 NSLS01000002.1 Genbank gene 49727 50284 . + . ID=gene-CLI77_01445;Name=CLI77_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01445 NSLS01000002.1 Protein Homology CDS 49727 50284 . + 0 ID=cds-PDP50310.1;Parent=gene-CLI77_01445;Dbxref=NCBI_GP:PDP50310.1;Name=PDP50310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583810.1;locus_tag=CLI77_01445;product=aminoacyl-tRNA hydrolase;protein_id=PDP50310.1;transl_table=11 NSLS01000002.1 Genbank gene 50290 50727 . + . ID=gene-CLI77_01450;Name=CLI77_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01450 NSLS01000002.1 Protein Homology CDS 50290 50727 . + 0 ID=cds-PDP50311.1;Parent=gene-CLI77_01450;Dbxref=NCBI_GP:PDP50311.1;Name=PDP50311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815412.1;locus_tag=CLI77_01450;product=heat-shock protein Hsp15;protein_id=PDP50311.1;transl_table=11 NSLS01000002.1 Genbank gene 50702 51016 . + . ID=gene-CLI77_01455;Name=CLI77_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01455 NSLS01000002.1 Protein Homology CDS 50702 51016 . + 0 ID=cds-PDP50312.1;Parent=gene-CLI77_01455;Dbxref=NCBI_GP:PDP50312.1;Name=PDP50312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457386.1;locus_tag=CLI77_01455;product=DUF1905 domain-containing protein;protein_id=PDP50312.1;transl_table=11 NSLS01000002.1 Genbank gene 51212 52861 . + . ID=gene-CLI77_01460;Name=CLI77_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01460 NSLS01000002.1 Protein Homology CDS 51212 52861 . + 0 ID=cds-PDP50313.1;Parent=gene-CLI77_01460;Dbxref=NCBI_GP:PDP50313.1;Name=PDP50313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815410.1;locus_tag=CLI77_01460;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=PDP50313.1;transl_table=11 NSLS01000002.1 Genbank gene 53010 53591 . + . ID=gene-CLI77_01465;Name=CLI77_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01465 NSLS01000002.1 Protein Homology CDS 53010 53591 . + 0 ID=cds-PDP50314.1;Parent=gene-CLI77_01465;Dbxref=NCBI_GP:PDP50314.1;Name=PDP50314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583806.1;locus_tag=CLI77_01465;product=RNA polymerase subunit sigma-24;protein_id=PDP50314.1;transl_table=11 NSLS01000002.1 Genbank gene 54011 54913 . + . ID=gene-CLI77_01470;Name=CLI77_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01470 NSLS01000002.1 Protein Homology CDS 54011 54913 . + 0 ID=cds-PDP50315.1;Parent=gene-CLI77_01470;Dbxref=NCBI_GP:PDP50315.1;Name=PDP50315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583804.1;locus_tag=CLI77_01470;product=nucleotidyltransferase;protein_id=PDP50315.1;transl_table=11 NSLS01000002.1 Genbank gene 54932 57001 . + . ID=gene-CLI77_01475;Name=CLI77_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01475 NSLS01000002.1 Protein Homology CDS 54932 57001 . + 0 ID=cds-PDP50316.1;Parent=gene-CLI77_01475;Dbxref=NCBI_GP:PDP50316.1;Name=PDP50316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875347.1;locus_tag=CLI77_01475;product=peptidase M13;protein_id=PDP50316.1;transl_table=11 NSLS01000002.1 Genbank gene 57131 57871 . - . ID=gene-CLI77_01480;Name=CLI77_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01480 NSLS01000002.1 Protein Homology CDS 57131 57871 . - 0 ID=cds-PDP50317.1;Parent=gene-CLI77_01480;Dbxref=NCBI_GP:PDP50317.1;Name=PDP50317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875257.1;locus_tag=CLI77_01480;product=amidophosphoribosyltransferase;protein_id=PDP50317.1;transl_table=11 NSLS01000002.1 Genbank gene 57855 58340 . - . ID=gene-CLI77_01485;Name=CLI77_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01485 NSLS01000002.1 Protein Homology CDS 57855 58340 . - 0 ID=cds-PDP50318.1;Parent=gene-CLI77_01485;Dbxref=NCBI_GP:PDP50318.1;Name=PDP50318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583801.1;locus_tag=CLI77_01485;product=recombinase RecX;protein_id=PDP50318.1;transl_table=11 NSLS01000002.1 Genbank gene 58337 59218 . - . ID=gene-CLI77_01490;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CLI77_01490 NSLS01000002.1 Protein Homology CDS 58337 59218 . - 0 ID=cds-PDP50319.1;Parent=gene-CLI77_01490;Dbxref=NCBI_GP:PDP50319.1;Name=PDP50319.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875312.1;locus_tag=CLI77_01490;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=PDP50319.1;transl_table=11 NSLS01000002.1 Genbank gene 59243 60235 . + . ID=gene-CLI77_01495;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CLI77_01495 NSLS01000002.1 Protein Homology CDS 59243 60235 . + 0 ID=cds-PDP50320.1;Parent=gene-CLI77_01495;Dbxref=NCBI_GP:PDP50320.1;Name=PDP50320.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875259.1;locus_tag=CLI77_01495;product=riboflavin biosynthesis protein RibD;protein_id=PDP50320.1;transl_table=11 NSLS01000002.1 Genbank gene 60666 62429 . + . ID=gene-CLI77_01500;Name=CLI77_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01500 NSLS01000002.1 Protein Homology CDS 60666 62429 . + 0 ID=cds-PDP50321.1;Parent=gene-CLI77_01500;Dbxref=NCBI_GP:PDP50321.1;Name=PDP50321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457378.1;locus_tag=CLI77_01500;product=aspartate--tRNA ligase;protein_id=PDP50321.1;transl_table=11 NSLS01000002.1 Genbank gene 62439 63575 . + . ID=gene-CLI77_01505;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=CLI77_01505 NSLS01000002.1 Protein Homology CDS 62439 63575 . + 0 ID=cds-PDP50322.1;Parent=gene-CLI77_01505;Dbxref=NCBI_GP:PDP50322.1;Name=PDP50322.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965227.1;locus_tag=CLI77_01505;product=carboxynorspermidine decarboxylase;protein_id=PDP50322.1;transl_table=11 NSLS01000002.1 Genbank gene 63602 64555 . + . ID=gene-CLI77_01510;Name=CLI77_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01510 NSLS01000002.1 Protein Homology CDS 63602 64555 . + 0 ID=cds-PDP50323.1;Parent=gene-CLI77_01510;Dbxref=NCBI_GP:PDP50323.1;Name=PDP50323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857252.1;locus_tag=CLI77_01510;product=signal recognition particle-docking protein FtsY;protein_id=PDP50323.1;transl_table=11 NSLS01000002.1 Genbank gene 64552 65856 . + . ID=gene-CLI77_01515;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CLI77_01515 NSLS01000002.1 Protein Homology CDS 64552 65856 . + 0 ID=cds-PDP50324.1;Parent=gene-CLI77_01515;Dbxref=NCBI_GP:PDP50324.1;Name=PDP50324.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457376.1;locus_tag=CLI77_01515;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=PDP50324.1;transl_table=11 NSLS01000002.1 Genbank gene 65893 67161 . + . ID=gene-CLI77_01520;Name=CLI77_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01520 NSLS01000002.1 Protein Homology CDS 65893 67161 . + 0 ID=cds-PDP50325.1;Parent=gene-CLI77_01520;Dbxref=NCBI_GP:PDP50325.1;Name=PDP50325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815403.1;locus_tag=CLI77_01520;product=hypothetical protein;protein_id=PDP50325.1;transl_table=11 NSLS01000002.1 Genbank gene 67189 68442 . + . ID=gene-CLI77_01525;Name=CLI77_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01525 NSLS01000002.1 Protein Homology CDS 67189 68442 . + 0 ID=cds-PDP50326.1;Parent=gene-CLI77_01525;Dbxref=NCBI_GP:PDP50326.1;Name=PDP50326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457374.1;locus_tag=CLI77_01525;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP50326.1;transl_table=11 NSLS01000002.1 Genbank gene 68429 68968 . + . ID=gene-CLI77_01530;Name=CLI77_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01530 NSLS01000002.1 Protein Homology CDS 68429 68968 . + 0 ID=cds-PDP50327.1;Parent=gene-CLI77_01530;Dbxref=NCBI_GP:PDP50327.1;Name=PDP50327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965232.1;locus_tag=CLI77_01530;product=hypothetical protein;protein_id=PDP50327.1;transl_table=11 NSLS01000002.1 Genbank gene 68981 69688 . + . ID=gene-CLI77_01535;Name=CLI77_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01535 NSLS01000002.1 Protein Homology CDS 68981 69688 . + 0 ID=cds-PDP50328.1;Parent=gene-CLI77_01535;Dbxref=NCBI_GP:PDP50328.1;Name=PDP50328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815401.1;locus_tag=CLI77_01535;product=hypothetical protein;protein_id=PDP50328.1;transl_table=11 NSLS01000002.1 Genbank gene 69691 70077 . + . ID=gene-CLI77_01540;Name=CLI77_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01540 NSLS01000002.1 Protein Homology CDS 69691 70077 . + 0 ID=cds-PDP50329.1;Parent=gene-CLI77_01540;Dbxref=NCBI_GP:PDP50329.1;Name=PDP50329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583789.1;locus_tag=CLI77_01540;product=preprotein translocase subunit SecG;protein_id=PDP50329.1;transl_table=11 NSLS01000002.1 Genbank gene 70385 71410 . + . ID=gene-CLI77_01545;Name=CLI77_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01545 NSLS01000002.1 Protein Homology CDS 70385 71410 . + 0 ID=cds-PDP50330.1;Parent=gene-CLI77_01545;Dbxref=NCBI_GP:PDP50330.1;Name=PDP50330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875332.1;locus_tag=CLI77_01545;product=agmatine deiminase;protein_id=PDP50330.1;transl_table=11 NSLS01000002.1 Genbank gene 71428 72306 . + . ID=gene-CLI77_01550;Name=CLI77_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01550 NSLS01000002.1 Protein Homology CDS 71428 72306 . + 0 ID=cds-PDP50331.1;Parent=gene-CLI77_01550;Dbxref=NCBI_GP:PDP50331.1;Name=PDP50331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583787.1;locus_tag=CLI77_01550;product=acyltransferase;protein_id=PDP50331.1;transl_table=11 NSLS01000002.1 Genbank gene 72522 73298 . + . ID=gene-CLI77_01555;Name=CLI77_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01555 NSLS01000002.1 Protein Homology CDS 72522 73298 . + 0 ID=cds-PDP50332.1;Parent=gene-CLI77_01555;Dbxref=NCBI_GP:PDP50332.1;Name=PDP50332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815398.1;locus_tag=CLI77_01555;product=chromosome partitioning protein ParA;protein_id=PDP50332.1;transl_table=11 NSLS01000002.1 Genbank gene 73306 74175 . + . ID=gene-CLI77_01560;Name=CLI77_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01560 NSLS01000002.1 Protein Homology CDS 73306 74175 . + 0 ID=cds-PDP50333.1;Parent=gene-CLI77_01560;Dbxref=NCBI_GP:PDP50333.1;Name=PDP50333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583785.1;locus_tag=CLI77_01560;product=chromosome partitioning protein ParB;protein_id=PDP50333.1;transl_table=11 NSLS01000002.1 Genbank gene 74195 74902 . + . ID=gene-CLI77_01565;Name=CLI77_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01565 NSLS01000002.1 Protein Homology CDS 74195 74902 . + 0 ID=cds-PDP50334.1;Parent=gene-CLI77_01565;Dbxref=NCBI_GP:PDP50334.1;Name=PDP50334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815397.1;locus_tag=CLI77_01565;product=hypothetical protein;protein_id=PDP50334.1;transl_table=11 NSLS01000002.1 Genbank gene 74912 76267 . + . ID=gene-CLI77_01570;Name=CLI77_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01570 NSLS01000002.1 Protein Homology CDS 74912 76267 . + 0 ID=cds-PDP50335.1;Parent=gene-CLI77_01570;Dbxref=NCBI_GP:PDP50335.1;Name=PDP50335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583783.1;locus_tag=CLI77_01570;product=lytic transglycosylase;protein_id=PDP50335.1;transl_table=11 NSLS01000002.1 Genbank gene 76449 77330 . - . ID=gene-CLI77_01575;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CLI77_01575 NSLS01000002.1 Protein Homology CDS 76449 77330 . - 0 ID=cds-PDP50336.1;Parent=gene-CLI77_01575;Dbxref=NCBI_GP:PDP50336.1;Name=PDP50336.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799941.1;locus_tag=CLI77_01575;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=PDP50336.1;transl_table=11 NSLS01000002.1 Genbank gene 77445 78899 . - . ID=gene-CLI77_01580;Name=CLI77_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01580 NSLS01000002.1 Protein Homology CDS 77445 78899 . - 0 ID=cds-PDP50337.1;Parent=gene-CLI77_01580;Dbxref=NCBI_GP:PDP50337.1;Name=PDP50337.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815394.1;locus_tag=CLI77_01580;product=aminoacyl-histidine dipeptidase;protein_id=PDP50337.1;transl_table=11 NSLS01000002.1 Genbank gene 78930 79979 . - . ID=gene-CLI77_01585;Name=CLI77_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01585 NSLS01000002.1 Protein Homology CDS 78930 79979 . - 0 ID=cds-PDP50338.1;Parent=gene-CLI77_01585;Dbxref=NCBI_GP:PDP50338.1;Name=PDP50338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965244.1;locus_tag=CLI77_01585;product=lysylphosphatidylglycerol synthetase family protein;protein_id=PDP50338.1;transl_table=11 NSLS01000002.1 Genbank gene 80110 80886 . + . ID=gene-CLI77_01590;Name=CLI77_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01590 NSLS01000002.1 Protein Homology CDS 80110 80886 . + 0 ID=cds-PDP50339.1;Parent=gene-CLI77_01590;Dbxref=NCBI_GP:PDP50339.1;Name=PDP50339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815393.1;locus_tag=CLI77_01590;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=PDP50339.1;transl_table=11 NSLS01000002.1 Genbank gene 80918 82270 . + . ID=gene-CLI77_01595;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CLI77_01595 NSLS01000002.1 Protein Homology CDS 80918 82270 . + 0 ID=cds-PDP50340.1;Parent=gene-CLI77_01595;Dbxref=NCBI_GP:PDP50340.1;Name=PDP50340.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815392.1;locus_tag=CLI77_01595;product=magnesium transporter;protein_id=PDP50340.1;transl_table=11 NSLS01000002.1 Genbank gene 82289 83794 . + . ID=gene-CLI77_01600;Name=CLI77_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01600 NSLS01000002.1 Protein Homology CDS 82289 83794 . + 0 ID=cds-PDP50341.1;Parent=gene-CLI77_01600;Dbxref=NCBI_GP:PDP50341.1;Name=PDP50341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965247.1;locus_tag=CLI77_01600;product=polysaccharide biosynthesis protein;protein_id=PDP50341.1;transl_table=11 NSLS01000002.1 Genbank gene 83791 85101 . + . ID=gene-CLI77_01605;Name=CLI77_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01605 NSLS01000002.1 Protein Homology CDS 83791 85101 . + 0 ID=cds-PDP50342.1;Parent=gene-CLI77_01605;Dbxref=NCBI_GP:PDP50342.1;Name=PDP50342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457362.1;locus_tag=CLI77_01605;product=hypothetical protein;protein_id=PDP50342.1;transl_table=11 NSLS01000002.1 Genbank gene 85162 85371 . + . ID=gene-CLI77_01610;Name=CLI77_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01610 NSLS01000002.1 Protein Homology CDS 85162 85371 . + 0 ID=cds-PDP50343.1;Parent=gene-CLI77_01610;Dbxref=NCBI_GP:PDP50343.1;Name=PDP50343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965249.1;locus_tag=CLI77_01610;product=hypothetical protein;protein_id=PDP50343.1;transl_table=11 NSLS01000002.1 Genbank gene 85385 86131 . + . ID=gene-CLI77_01615;Name=CLI77_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01615 NSLS01000002.1 Protein Homology CDS 85385 86131 . + 0 ID=cds-PDP50344.1;Parent=gene-CLI77_01615;Dbxref=NCBI_GP:PDP50344.1;Name=PDP50344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842966.1;locus_tag=CLI77_01615;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=PDP50344.1;transl_table=11 NSLS01000002.1 Genbank gene 86267 87415 . - . ID=gene-CLI77_01620;Name=CLI77_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01620 NSLS01000002.1 Protein Homology CDS 86267 87415 . - 0 ID=cds-PDP50345.1;Parent=gene-CLI77_01620;Dbxref=NCBI_GP:PDP50345.1;Name=PDP50345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457360.1;locus_tag=CLI77_01620;product=mannosyltransferase;protein_id=PDP50345.1;transl_table=11 NSLS01000002.1 Genbank gene 87432 88406 . - . ID=gene-CLI77_01625;Name=CLI77_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01625 NSLS01000002.1 Protein Homology CDS 87432 88406 . - 0 ID=cds-PDP50346.1;Parent=gene-CLI77_01625;Dbxref=NCBI_GP:PDP50346.1;Name=PDP50346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583772.1;locus_tag=CLI77_01625;product=lipopolysaccharide kinase;protein_id=PDP50346.1;transl_table=11 NSLS01000002.1 Genbank gene 88413 89450 . - . ID=gene-CLI77_01630;Name=CLI77_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01630 NSLS01000002.1 Protein Homology CDS 88413 89450 . - 0 ID=cds-PDP50347.1;Parent=gene-CLI77_01630;Dbxref=NCBI_GP:PDP50347.1;Name=PDP50347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457358.1;locus_tag=CLI77_01630;product=ferrochelatase;protein_id=PDP50347.1;transl_table=11 NSLS01000002.1 Genbank gene 89530 89886 . - . ID=gene-CLI77_01635;Name=CLI77_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01635 NSLS01000002.1 GeneMarkS+ CDS 89530 89886 . - 0 ID=cds-PDP50348.1;Parent=gene-CLI77_01635;Dbxref=NCBI_GP:PDP50348.1;Name=PDP50348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_01635;product=hypothetical protein;protein_id=PDP50348.1;transl_table=11 NSLS01000002.1 Genbank gene 90030 91265 . + . ID=gene-CLI77_01640;Name=CLI77_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01640 NSLS01000002.1 Protein Homology CDS 90030 91265 . + 0 ID=cds-PDP50349.1;Parent=gene-CLI77_01640;Dbxref=NCBI_GP:PDP50349.1;Name=PDP50349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457357.1;locus_tag=CLI77_01640;product=alkaline phosphatase family protein;protein_id=PDP50349.1;transl_table=11 NSLS01000002.1 Genbank gene 91262 91810 . + . ID=gene-CLI77_01645;Name=CLI77_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01645 NSLS01000002.1 Protein Homology CDS 91262 91810 . + 0 ID=cds-PDP50350.1;Parent=gene-CLI77_01645;Dbxref=NCBI_GP:PDP50350.1;Name=PDP50350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583769.1;locus_tag=CLI77_01645;product=DUF4924 domain-containing protein;protein_id=PDP50350.1;transl_table=11 NSLS01000002.1 Genbank gene 91814 92434 . + . ID=gene-CLI77_01650;Name=CLI77_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01650 NSLS01000002.1 Protein Homology CDS 91814 92434 . + 0 ID=cds-PDP50351.1;Parent=gene-CLI77_01650;Dbxref=NCBI_GP:PDP50351.1;Name=PDP50351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815381.1;locus_tag=CLI77_01650;product=YigZ family protein;protein_id=PDP50351.1;transl_table=11 NSLS01000002.1 Genbank gene 92494 93069 . - . ID=gene-CLI77_01655;Name=CLI77_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01655 NSLS01000002.1 Protein Homology CDS 92494 93069 . - 0 ID=cds-PDP50352.1;Parent=gene-CLI77_01655;Dbxref=NCBI_GP:PDP50352.1;Name=PDP50352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583767.1;locus_tag=CLI77_01655;product=hypothetical protein;protein_id=PDP50352.1;transl_table=11 NSLS01000002.1 Genbank gene 93264 93530 . - . ID=gene-CLI77_01660;Name=CLI77_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01660 NSLS01000002.1 Protein Homology CDS 93264 93530 . - 0 ID=cds-PDP50353.1;Parent=gene-CLI77_01660;Dbxref=NCBI_GP:PDP50353.1;Name=PDP50353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583766.1;locus_tag=CLI77_01660;product=HU family DNA-binding protein;protein_id=PDP50353.1;transl_table=11 NSLS01000002.1 Genbank gene 93836 94996 . - . ID=gene-CLI77_01665;Name=CLI77_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01665 NSLS01000002.1 Protein Homology CDS 93836 94996 . - 0 ID=cds-PDP50354.1;Parent=gene-CLI77_01665;Dbxref=NCBI_GP:PDP50354.1;Name=PDP50354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815379.1;locus_tag=CLI77_01665;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=PDP50354.1;transl_table=11 NSLS01000002.1 Genbank gene 95002 95700 . - . ID=gene-CLI77_01670;Name=CLI77_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01670 NSLS01000002.1 Protein Homology CDS 95002 95700 . - 0 ID=cds-PDP50355.1;Parent=gene-CLI77_01670;Dbxref=NCBI_GP:PDP50355.1;Name=PDP50355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457352.1;locus_tag=CLI77_01670;product=glycosyltransferase;protein_id=PDP50355.1;transl_table=11 NSLS01000002.1 Genbank gene 95742 96782 . - . ID=gene-CLI77_01675;Name=CLI77_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01675 NSLS01000002.1 Protein Homology CDS 95742 96782 . - 0 ID=cds-PDP50356.1;Parent=gene-CLI77_01675;Dbxref=NCBI_GP:PDP50356.1;Name=PDP50356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457351.1;locus_tag=CLI77_01675;product=glycosyltransferase family 2 protein;protein_id=PDP50356.1;transl_table=11 NSLS01000002.1 Genbank gene 96803 97987 . - . ID=gene-CLI77_01680;Name=CLI77_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01680 NSLS01000002.1 Protein Homology CDS 96803 97987 . - 0 ID=cds-PDP50357.1;Parent=gene-CLI77_01680;Dbxref=NCBI_GP:PDP50357.1;Name=PDP50357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875344.1;locus_tag=CLI77_01680;product=delta-aminolevulinic acid dehydratase;protein_id=PDP50357.1;transl_table=11 NSLS01000002.1 Genbank gene 97981 98418 . - . ID=gene-CLI77_01685;Name=CLI77_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01685 NSLS01000002.1 Protein Homology CDS 97981 98418 . - 0 ID=cds-PDP50358.1;Parent=gene-CLI77_01685;Dbxref=NCBI_GP:PDP50358.1;Name=PDP50358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815376.1;locus_tag=CLI77_01685;product=serine acetyltransferase;protein_id=PDP50358.1;transl_table=11 NSLS01000002.1 Genbank gene 98546 99025 . - . ID=gene-CLI77_01690;Name=CLI77_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01690 NSLS01000002.1 Protein Homology CDS 98546 99025 . - 0 ID=cds-PDP50359.1;Parent=gene-CLI77_01690;Dbxref=NCBI_GP:PDP50359.1;Name=PDP50359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815375.1;locus_tag=CLI77_01690;product=histidinol phosphate phosphatase;protein_id=PDP50359.1;transl_table=11 NSLS01000002.1 Genbank gene 99320 100654 . - . ID=gene-CLI77_01695;Name=CLI77_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01695 NSLS01000002.1 Protein Homology CDS 99320 100654 . - 0 ID=cds-PDP50360.1;Parent=gene-CLI77_01695;Dbxref=NCBI_GP:PDP50360.1;Name=PDP50360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815374.1;locus_tag=CLI77_01695;product=CoF synthetase;protein_id=PDP50360.1;transl_table=11 NSLS01000002.1 Genbank gene 100667 101725 . - . ID=gene-CLI77_01700;Name=CLI77_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01700 NSLS01000002.1 Protein Homology CDS 100667 101725 . - 0 ID=cds-PDP50361.1;Parent=gene-CLI77_01700;Dbxref=NCBI_GP:PDP50361.1;Name=PDP50361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457346.1;locus_tag=CLI77_01700;product=glycosyl transferase family 1;protein_id=PDP50361.1;transl_table=11 NSLS01000002.1 Genbank gene 101735 102940 . - . ID=gene-CLI77_01705;Name=CLI77_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01705 NSLS01000002.1 Protein Homology CDS 101735 102940 . - 0 ID=cds-PDP50362.1;Parent=gene-CLI77_01705;Dbxref=NCBI_GP:PDP50362.1;Name=PDP50362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815372.1;locus_tag=CLI77_01705;product=hypothetical protein;protein_id=PDP50362.1;transl_table=11 NSLS01000002.1 Genbank gene 102910 103896 . - . ID=gene-CLI77_01710;Name=CLI77_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01710 NSLS01000002.1 Protein Homology CDS 102910 103896 . - 0 ID=cds-PDP50363.1;Parent=gene-CLI77_01710;Dbxref=NCBI_GP:PDP50363.1;Name=PDP50363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457344.1;locus_tag=CLI77_01710;product=glycosyl transferase;protein_id=PDP50363.1;transl_table=11 NSLS01000002.1 Genbank gene 104182 105390 . - . ID=gene-CLI77_01715;Name=CLI77_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01715 NSLS01000002.1 Protein Homology CDS 104182 105390 . - 0 ID=cds-PDP50364.1;Parent=gene-CLI77_01715;Dbxref=NCBI_GP:PDP50364.1;Name=PDP50364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815370.1;locus_tag=CLI77_01715;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=PDP50364.1;transl_table=11 NSLS01000002.1 Genbank gene 105638 106744 . - . ID=gene-CLI77_01720;Name=CLI77_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01720 NSLS01000002.1 Protein Homology CDS 105638 106744 . - 0 ID=cds-PDP50365.1;Parent=gene-CLI77_01720;Dbxref=NCBI_GP:PDP50365.1;Name=PDP50365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457342.1;locus_tag=CLI77_01720;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=PDP50365.1;transl_table=11 NSLS01000002.1 Genbank pseudogene 107152 107566 . + . ID=gene-CLI77_01725;Name=CLI77_01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01725;pseudo=true NSLS01000002.1 Protein Homology CDS 107152 107566 . + 0 ID=cds-CLI77_01725;Parent=gene-CLI77_01725;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956526.1;locus_tag=CLI77_01725;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000002.1 Genbank gene 108119 110146 . - . ID=gene-CLI77_01730;Name=CLI77_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01730 NSLS01000002.1 Protein Homology CDS 108119 110146 . - 0 ID=cds-PDP50369.1;Parent=gene-CLI77_01730;Dbxref=NCBI_GP:PDP50369.1;Name=PDP50369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583756.1;locus_tag=CLI77_01730;product=DNA topoisomerase III;protein_id=PDP50369.1;transl_table=11 NSLS01000002.1 Genbank gene 110768 110876 . - . ID=gene-CLI77_01735;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI77_01735 NSLS01000002.1 cmsearch rRNA 110768 110876 . - . ID=rna-CLI77_01735;Parent=gene-CLI77_01735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_01735;product=5S ribosomal RNA NSLS01000002.1 cmsearch exon 110768 110876 . - . ID=exon-CLI77_01735-1;Parent=rna-CLI77_01735;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_01735;product=5S ribosomal RNA ##sequence-region NSLS01000030.1 1 27743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000030.1 Genbank region 1 27743 . + . ID=NSLS01000030.1:1..27743;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000030.1 Genbank gene 45 1130 . + . ID=gene-CLI77_08185;Name=CLI77_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08185 NSLS01000030.1 Protein Homology CDS 45 1130 . + 0 ID=cds-PDP48635.1;Parent=gene-CLI77_08185;Dbxref=NCBI_GP:PDP48635.1;Name=PDP48635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_08185;product=IS5/IS1182 family transposase;protein_id=PDP48635.1;transl_table=11 NSLS01000030.1 Genbank gene 1144 1344 . + . ID=gene-CLI77_08190;Name=CLI77_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08190 NSLS01000030.1 Protein Homology CDS 1144 1344 . + 0 ID=cds-PDP48636.1;Parent=gene-CLI77_08190;Dbxref=NCBI_GP:PDP48636.1;Name=PDP48636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815747.1;locus_tag=CLI77_08190;product=hypothetical protein;protein_id=PDP48636.1;transl_table=11 NSLS01000030.1 Genbank pseudogene 1277 2794 . - . ID=gene-CLI77_08195;Name=CLI77_08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08195;pseudo=true NSLS01000030.1 Protein Homology CDS 1277 2794 . - 0 ID=cds-CLI77_08195;Parent=gene-CLI77_08195;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583455.1;locus_tag=CLI77_08195;product=long-chain fatty acid--CoA ligase;pseudo=true;transl_table=11 NSLS01000030.1 Genbank gene 2797 3090 . + . ID=gene-CLI77_08200;Name=CLI77_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08200 NSLS01000030.1 GeneMarkS+ CDS 2797 3090 . + 0 ID=cds-PDP48637.1;Parent=gene-CLI77_08200;Dbxref=NCBI_GP:PDP48637.1;Name=PDP48637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_08200;product=hypothetical protein;protein_id=PDP48637.1;transl_table=11 NSLS01000030.1 Genbank gene 3515 5638 . - . ID=gene-CLI77_08205;Name=CLI77_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08205 NSLS01000030.1 Protein Homology CDS 3515 5638 . - 0 ID=cds-PDP48638.1;Parent=gene-CLI77_08205;Dbxref=NCBI_GP:PDP48638.1;Name=PDP48638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815147.1;locus_tag=CLI77_08205;product=recombinase RecQ;protein_id=PDP48638.1;transl_table=11 NSLS01000030.1 Genbank gene 5684 5926 . - . ID=gene-CLI77_08210;Name=CLI77_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08210 NSLS01000030.1 Protein Homology CDS 5684 5926 . - 0 ID=cds-PDP48639.1;Parent=gene-CLI77_08210;Dbxref=NCBI_GP:PDP48639.1;Name=PDP48639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07877.9;locus_tag=CLI77_08210;product=DUF1661 domain-containing protein;protein_id=PDP48639.1;transl_table=11 NSLS01000030.1 Genbank gene 6046 6297 . - . ID=gene-CLI77_08215;Name=CLI77_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08215 NSLS01000030.1 Protein Homology CDS 6046 6297 . - 0 ID=cds-PDP48666.1;Parent=gene-CLI77_08215;Dbxref=NCBI_GP:PDP48666.1;Name=PDP48666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583453.1;locus_tag=CLI77_08215;product=hypothetical protein;protein_id=PDP48666.1;transl_table=11 NSLS01000030.1 Genbank gene 6265 7080 . + . ID=gene-CLI77_08220;Name=CLI77_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08220 NSLS01000030.1 Protein Homology CDS 6265 7080 . + 0 ID=cds-PDP48640.1;Parent=gene-CLI77_08220;Dbxref=NCBI_GP:PDP48640.1;Name=PDP48640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874138.1;locus_tag=CLI77_08220;product=glycogen synthase;protein_id=PDP48640.1;transl_table=11 NSLS01000030.1 Genbank gene 7183 8550 . + . ID=gene-CLI77_08225;Name=CLI77_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08225 NSLS01000030.1 Protein Homology CDS 7183 8550 . + 0 ID=cds-PDP48641.1;Parent=gene-CLI77_08225;Dbxref=NCBI_GP:PDP48641.1;Name=PDP48641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458494.1;locus_tag=CLI77_08225;product=hypothetical protein;protein_id=PDP48641.1;transl_table=11 NSLS01000030.1 Genbank gene 8653 9888 . + . ID=gene-CLI77_08230;Name=CLI77_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08230 NSLS01000030.1 Protein Homology CDS 8653 9888 . + 0 ID=cds-PDP48642.1;Parent=gene-CLI77_08230;Dbxref=NCBI_GP:PDP48642.1;Name=PDP48642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874124.1;locus_tag=CLI77_08230;product=MFS transporter;protein_id=PDP48642.1;transl_table=11 NSLS01000030.1 Genbank gene 10513 10635 . + . ID=gene-CLI77_08235;Name=CLI77_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08235 NSLS01000030.1 Protein Homology CDS 10513 10635 . + 0 ID=cds-PDP48667.1;Parent=gene-CLI77_08235;Dbxref=NCBI_GP:PDP48667.1;Name=PDP48667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004375892.1;locus_tag=CLI77_08235;product=glycine cleavage system H protein;protein_id=PDP48667.1;transl_table=11 NSLS01000030.1 Genbank gene 10808 11017 . + . ID=gene-CLI77_08240;Name=CLI77_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08240 NSLS01000030.1 Protein Homology CDS 10808 11017 . + 0 ID=cds-PDP48643.1;Parent=gene-CLI77_08240;Dbxref=NCBI_GP:PDP48643.1;Name=PDP48643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014298174.1;locus_tag=CLI77_08240;product=hypothetical protein;protein_id=PDP48643.1;transl_table=11 NSLS01000030.1 Genbank gene 11030 11248 . + . ID=gene-CLI77_08245;Name=CLI77_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08245 NSLS01000030.1 Protein Homology CDS 11030 11248 . + 0 ID=cds-PDP48644.1;Parent=gene-CLI77_08245;Dbxref=NCBI_GP:PDP48644.1;Name=PDP48644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584361.1;locus_tag=CLI77_08245;product=hypothetical protein;protein_id=PDP48644.1;transl_table=11 NSLS01000030.1 Genbank gene 11260 11541 . + . ID=gene-CLI77_08250;Name=CLI77_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08250 NSLS01000030.1 Protein Homology CDS 11260 11541 . + 0 ID=cds-PDP48645.1;Parent=gene-CLI77_08250;Dbxref=NCBI_GP:PDP48645.1;Name=PDP48645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584360.1;locus_tag=CLI77_08250;product=hypothetical protein;protein_id=PDP48645.1;transl_table=11 NSLS01000030.1 Genbank gene 11554 12144 . + . ID=gene-CLI77_08255;Name=CLI77_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08255 NSLS01000030.1 Protein Homology CDS 11554 12144 . + 0 ID=cds-PDP48646.1;Parent=gene-CLI77_08255;Dbxref=NCBI_GP:PDP48646.1;Name=PDP48646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341685.1;locus_tag=CLI77_08255;product=hypothetical protein;protein_id=PDP48646.1;transl_table=11 NSLS01000030.1 Genbank gene 12162 12575 . + . ID=gene-CLI77_08260;Name=CLI77_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08260 NSLS01000030.1 Protein Homology CDS 12162 12575 . + 0 ID=cds-PDP48647.1;Parent=gene-CLI77_08260;Dbxref=NCBI_GP:PDP48647.1;Name=PDP48647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457194.1;locus_tag=CLI77_08260;product=PcfK-like protein;protein_id=PDP48647.1;transl_table=11 NSLS01000030.1 Genbank gene 12594 13124 . + . ID=gene-CLI77_08265;Name=CLI77_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08265 NSLS01000030.1 Protein Homology CDS 12594 13124 . + 0 ID=cds-PDP48648.1;Parent=gene-CLI77_08265;Dbxref=NCBI_GP:PDP48648.1;Name=PDP48648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353689.1;locus_tag=CLI77_08265;product=antirestriction protein ArdA;protein_id=PDP48648.1;transl_table=11 NSLS01000030.1 Genbank gene 13142 14416 . + . ID=gene-CLI77_08270;Name=CLI77_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08270 NSLS01000030.1 Protein Homology CDS 13142 14416 . + 0 ID=cds-PDP48649.1;Parent=gene-CLI77_08270;Dbxref=NCBI_GP:PDP48649.1;Name=PDP48649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346325.1;locus_tag=CLI77_08270;product=PcfJ-like protein;protein_id=PDP48649.1;transl_table=11 NSLS01000030.1 Genbank gene 14432 14662 . + . ID=gene-CLI77_08275;Name=CLI77_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08275 NSLS01000030.1 Protein Homology CDS 14432 14662 . + 0 ID=cds-PDP48668.1;Parent=gene-CLI77_08275;Dbxref=NCBI_GP:PDP48668.1;Name=PDP48668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847779.1;locus_tag=CLI77_08275;product=hypothetical protein;protein_id=PDP48668.1;transl_table=11 NSLS01000030.1 Genbank gene 14829 15398 . - . ID=gene-CLI77_08280;Name=CLI77_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08280 NSLS01000030.1 Protein Homology CDS 14829 15398 . - 0 ID=cds-PDP48650.1;Parent=gene-CLI77_08280;Dbxref=NCBI_GP:PDP48650.1;Name=PDP48650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942818.1;locus_tag=CLI77_08280;product=hypothetical protein;protein_id=PDP48650.1;transl_table=11 NSLS01000030.1 Genbank gene 15514 16029 . - . ID=gene-CLI77_08285;Name=CLI77_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08285 NSLS01000030.1 Protein Homology CDS 15514 16029 . - 0 ID=cds-PDP48651.1;Parent=gene-CLI77_08285;Dbxref=NCBI_GP:PDP48651.1;Name=PDP48651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457201.1;locus_tag=CLI77_08285;product=lysozyme;protein_id=PDP48651.1;transl_table=11 NSLS01000030.1 Genbank gene 16013 16474 . - . ID=gene-CLI77_08290;Name=CLI77_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08290 NSLS01000030.1 Protein Homology CDS 16013 16474 . - 0 ID=cds-PDP48652.1;Parent=gene-CLI77_08290;Dbxref=NCBI_GP:PDP48652.1;Name=PDP48652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564063.1;locus_tag=CLI77_08290;product=DUF3872 domain-containing protein;protein_id=PDP48652.1;transl_table=11 NSLS01000030.1 Genbank gene 16502 17347 . - . ID=gene-CLI77_08295;Name=CLI77_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08295 NSLS01000030.1 Protein Homology CDS 16502 17347 . - 0 ID=cds-PDP48653.1;Parent=gene-CLI77_08295;Dbxref=NCBI_GP:PDP48653.1;Name=PDP48653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815831.1;locus_tag=CLI77_08295;product=DNA primase;protein_id=PDP48653.1;transl_table=11 NSLS01000030.1 Genbank gene 17347 17931 . - . ID=gene-CLI77_08300;Name=CLI77_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08300 NSLS01000030.1 Protein Homology CDS 17347 17931 . - 0 ID=cds-PDP48654.1;Parent=gene-CLI77_08300;Dbxref=NCBI_GP:PDP48654.1;Name=PDP48654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457204.1;locus_tag=CLI77_08300;product=conjugal transfer protein TraO;protein_id=PDP48654.1;transl_table=11 NSLS01000030.1 Genbank gene 17933 18853 . - . ID=gene-CLI77_08305;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI77_08305 NSLS01000030.1 Protein Homology CDS 17933 18853 . - 0 ID=cds-PDP48655.1;Parent=gene-CLI77_08305;Dbxref=NCBI_GP:PDP48655.1;Name=PDP48655.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920025.1;locus_tag=CLI77_08305;product=conjugative transposon protein TraN;protein_id=PDP48655.1;transl_table=11 NSLS01000030.1 Genbank gene 18892 20253 . - . ID=gene-CLI77_08310;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI77_08310 NSLS01000030.1 Protein Homology CDS 18892 20253 . - 0 ID=cds-PDP48656.1;Parent=gene-CLI77_08310;Dbxref=NCBI_GP:PDP48656.1;Name=PDP48656.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564067.1;locus_tag=CLI77_08310;product=conjugative transposon protein TraM;protein_id=PDP48656.1;transl_table=11 NSLS01000030.1 Genbank gene 20204 20536 . - . ID=gene-CLI77_08315;Name=CLI77_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08315 NSLS01000030.1 Protein Homology CDS 20204 20536 . - 0 ID=cds-PDP48657.1;Parent=gene-CLI77_08315;Dbxref=NCBI_GP:PDP48657.1;Name=PDP48657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341671.1;locus_tag=CLI77_08315;product=DUF3989 domain-containing protein;protein_id=PDP48657.1;transl_table=11 NSLS01000030.1 Genbank gene 20533 21156 . - . ID=gene-CLI77_08320;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CLI77_08320 NSLS01000030.1 Protein Homology CDS 20533 21156 . - 0 ID=cds-PDP48658.1;Parent=gene-CLI77_08320;Dbxref=NCBI_GP:PDP48658.1;Name=PDP48658.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667416.1;locus_tag=CLI77_08320;product=conjugative transposon protein TraK;protein_id=PDP48658.1;transl_table=11 NSLS01000030.1 Genbank gene 21163 22254 . - . ID=gene-CLI77_08325;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CLI77_08325 NSLS01000030.1 Protein Homology CDS 21163 22254 . - 0 ID=cds-PDP48659.1;Parent=gene-CLI77_08325;Dbxref=NCBI_GP:PDP48659.1;Name=PDP48659.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584342.1;locus_tag=CLI77_08325;product=conjugative transposon protein TraJ;protein_id=PDP48659.1;transl_table=11 NSLS01000030.1 Genbank gene 22257 22868 . - . ID=gene-CLI77_08330;Name=CLI77_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08330 NSLS01000030.1 Protein Homology CDS 22257 22868 . - 0 ID=cds-PDP48660.1;Parent=gene-CLI77_08330;Dbxref=NCBI_GP:PDP48660.1;Name=PDP48660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004332888.1;locus_tag=CLI77_08330;product=DUF4141 domain-containing protein;protein_id=PDP48660.1;transl_table=11 NSLS01000030.1 Genbank gene 22919 25405 . - . ID=gene-CLI77_08335;Name=CLI77_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08335 NSLS01000030.1 Protein Homology CDS 22919 25405 . - 0 ID=cds-PDP48661.1;Parent=gene-CLI77_08335;Dbxref=NCBI_GP:PDP48661.1;Name=PDP48661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809006.1;locus_tag=CLI77_08335;product=conjugal transfer protein TraG;protein_id=PDP48661.1;transl_table=11 NSLS01000030.1 Genbank gene 25402 25779 . - . ID=gene-CLI77_08340;Name=CLI77_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08340 NSLS01000030.1 Protein Homology CDS 25402 25779 . - 0 ID=cds-PDP48662.1;Parent=gene-CLI77_08340;Dbxref=NCBI_GP:PDP48662.1;Name=PDP48662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362402.1;locus_tag=CLI77_08340;product=DUF4133 domain-containing protein;protein_id=PDP48662.1;transl_table=11 NSLS01000030.1 Genbank gene 25784 26083 . - . ID=gene-CLI77_08345;Name=CLI77_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08345 NSLS01000030.1 Protein Homology CDS 25784 26083 . - 0 ID=cds-PDP48663.1;Parent=gene-CLI77_08345;Dbxref=NCBI_GP:PDP48663.1;Name=PDP48663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341665.1;locus_tag=CLI77_08345;product=DUF4134 domain-containing protein;protein_id=PDP48663.1;transl_table=11 NSLS01000030.1 Genbank gene 26259 26846 . - . ID=gene-CLI77_08350;Name=CLI77_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08350 NSLS01000030.1 Protein Homology CDS 26259 26846 . - 0 ID=cds-PDP48664.1;Parent=gene-CLI77_08350;Dbxref=NCBI_GP:PDP48664.1;Name=PDP48664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815823.1;locus_tag=CLI77_08350;product=conjugal transfer protein;protein_id=PDP48664.1;transl_table=11 NSLS01000030.1 Genbank gene 26834 27574 . - . ID=gene-CLI77_08355;Name=CLI77_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08355 NSLS01000030.1 Protein Homology CDS 26834 27574 . - 0 ID=cds-PDP48665.1;Parent=gene-CLI77_08355;Dbxref=NCBI_GP:PDP48665.1;Name=PDP48665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815822.1;locus_tag=CLI77_08355;product=conjugal transfer protein TraA;protein_id=PDP48665.1;transl_table=11 ##sequence-region NSLS01000031.1 1 27659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000031.1 Genbank region 1 27659 . + . ID=NSLS01000031.1:1..27659;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000031.1 Genbank gene 29 139 . + . ID=gene-CLI77_08360;Name=CLI77_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08360 NSLS01000031.1 Protein Homology CDS 29 139 . + 0 ID=cds-PDP48617.1;Parent=gene-CLI77_08360;Dbxref=NCBI_GP:PDP48617.1;Name=PDP48617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_08360;product=DNA methylase;protein_id=PDP48617.1;transl_table=11 NSLS01000031.1 Genbank gene 663 1223 . - . ID=gene-CLI77_08365;Name=CLI77_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08365 NSLS01000031.1 Protein Homology CDS 663 1223 . - 0 ID=cds-PDP48602.1;Parent=gene-CLI77_08365;Dbxref=NCBI_GP:PDP48602.1;Name=PDP48602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964910.1;locus_tag=CLI77_08365;product=flavodoxin;protein_id=PDP48602.1;transl_table=11 NSLS01000031.1 Genbank gene 1442 4033 . + . ID=gene-CLI77_08370;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CLI77_08370 NSLS01000031.1 Protein Homology CDS 1442 4033 . + 0 ID=cds-PDP48603.1;Parent=gene-CLI77_08370;Dbxref=NCBI_GP:PDP48603.1;Name=PDP48603.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964909.1;locus_tag=CLI77_08370;product=chaperone protein ClpB;protein_id=PDP48603.1;transl_table=11 NSLS01000031.1 Genbank gene 4629 5975 . - . ID=gene-CLI77_08375;Name=CLI77_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08375 NSLS01000031.1 Protein Homology CDS 4629 5975 . - 0 ID=cds-PDP48604.1;Parent=gene-CLI77_08375;Dbxref=NCBI_GP:PDP48604.1;Name=PDP48604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584416.1;locus_tag=CLI77_08375;product=MATE family efflux transporter;protein_id=PDP48604.1;transl_table=11 NSLS01000031.1 Genbank gene 6269 7159 . - . ID=gene-CLI77_08380;Name=CLI77_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08380 NSLS01000031.1 Protein Homology CDS 6269 7159 . - 0 ID=cds-PDP48605.1;Parent=gene-CLI77_08380;Dbxref=NCBI_GP:PDP48605.1;Name=PDP48605.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584417.1;locus_tag=CLI77_08380;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=PDP48605.1;transl_table=11 NSLS01000031.1 Genbank gene 7280 8617 . - . ID=gene-CLI77_08385;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CLI77_08385 NSLS01000031.1 Protein Homology CDS 7280 8617 . - 0 ID=cds-PDP48606.1;Parent=gene-CLI77_08385;Dbxref=NCBI_GP:PDP48606.1;Name=PDP48606.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005652735.1;locus_tag=CLI77_08385;product=signal recognition particle protein;protein_id=PDP48606.1;transl_table=11 NSLS01000031.1 Genbank gene 8693 9049 . - . ID=gene-CLI77_08390;Name=CLI77_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08390 NSLS01000031.1 Protein Homology CDS 8693 9049 . - 0 ID=cds-PDP48607.1;Parent=gene-CLI77_08390;Dbxref=NCBI_GP:PDP48607.1;Name=PDP48607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956218.1;locus_tag=CLI77_08390;product=aspartate 1-decarboxylase;protein_id=PDP48607.1;transl_table=11 NSLS01000031.1 Genbank gene 9325 9621 . + . ID=gene-CLI77_08395;Name=CLI77_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08395 NSLS01000031.1 Protein Homology CDS 9325 9621 . + 0 ID=cds-PDP48618.1;Parent=gene-CLI77_08395;Dbxref=NCBI_GP:PDP48618.1;Name=PDP48618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI77_08395;product=hypothetical protein;protein_id=PDP48618.1;transl_table=11 NSLS01000031.1 Genbank gene 9941 11245 . + . ID=gene-CLI77_08400;Name=CLI77_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08400 NSLS01000031.1 Protein Homology CDS 9941 11245 . + 0 ID=cds-PDP48619.1;Parent=gene-CLI77_08400;Dbxref=NCBI_GP:PDP48619.1;Name=PDP48619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873680.1;locus_tag=CLI77_08400;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=PDP48619.1;transl_table=11 NSLS01000031.1 Genbank gene 11239 12696 . + . ID=gene-CLI77_08405;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CLI77_08405 NSLS01000031.1 Protein Homology CDS 11239 12696 . + 0 ID=cds-PDP48608.1;Parent=gene-CLI77_08405;Dbxref=NCBI_GP:PDP48608.1;Name=PDP48608.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458100.1;locus_tag=CLI77_08405;product=RNA polymerase sigma-54 factor;protein_id=PDP48608.1;transl_table=11 NSLS01000031.1 Genbank gene 12660 13427 . - . ID=gene-CLI77_08410;Name=CLI77_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08410 NSLS01000031.1 Protein Homology CDS 12660 13427 . - 0 ID=cds-PDP48609.1;Parent=gene-CLI77_08410;Dbxref=NCBI_GP:PDP48609.1;Name=PDP48609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873692.1;locus_tag=CLI77_08410;product=tRNA (adenosine(37)-N6)-methyltransferase TrmM;protein_id=PDP48609.1;transl_table=11 NSLS01000031.1 Genbank gene 13453 14757 . - . ID=gene-CLI77_08415;Name=CLI77_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08415 NSLS01000031.1 Protein Homology CDS 13453 14757 . - 0 ID=cds-PDP48620.1;Parent=gene-CLI77_08415;Dbxref=NCBI_GP:PDP48620.1;Name=PDP48620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956212.1;locus_tag=CLI77_08415;product=replication-associated recombination protein A;protein_id=PDP48620.1;transl_table=11 NSLS01000031.1 Genbank gene 15015 17552 . + . ID=gene-CLI77_08420;Name=CLI77_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08420 NSLS01000031.1 Protein Homology CDS 15015 17552 . + 0 ID=cds-PDP48621.1;Parent=gene-CLI77_08420;Dbxref=NCBI_GP:PDP48621.1;Name=PDP48621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873695.1;locus_tag=CLI77_08420;product=hypothetical protein;protein_id=PDP48621.1;transl_table=11 NSLS01000031.1 Genbank gene 17944 19404 . + . ID=gene-CLI77_08425;Name=CLI77_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08425 NSLS01000031.1 Protein Homology CDS 17944 19404 . + 0 ID=cds-PDP48610.1;Parent=gene-CLI77_08425;Dbxref=NCBI_GP:PDP48610.1;Name=PDP48610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815898.1;locus_tag=CLI77_08425;product=sodium:solute symporter;protein_id=PDP48610.1;transl_table=11 NSLS01000031.1 Genbank gene 19401 20252 . + . ID=gene-CLI77_08430;Name=CLI77_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08430 NSLS01000031.1 Protein Homology CDS 19401 20252 . + 0 ID=cds-PDP48611.1;Parent=gene-CLI77_08430;Dbxref=NCBI_GP:PDP48611.1;Name=PDP48611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815899.1;locus_tag=CLI77_08430;product=ATPase;protein_id=PDP48611.1;transl_table=11 NSLS01000031.1 Genbank gene 20245 21069 . + . ID=gene-CLI77_08435;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CLI77_08435 NSLS01000031.1 Protein Homology CDS 20245 21069 . + 0 ID=cds-PDP48612.1;Parent=gene-CLI77_08435;Dbxref=NCBI_GP:PDP48612.1;Name=PDP48612.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815900.1;locus_tag=CLI77_08435;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=PDP48612.1;transl_table=11 NSLS01000031.1 Genbank gene 21164 21237 . + . ID=gene-CLI77_08440;Name=CLI77_08440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_08440 NSLS01000031.1 tRNAscan-SE tRNA 21164 21237 . + . ID=rna-CLI77_08440;Parent=gene-CLI77_08440;anticodon=(pos:21198..21200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08440;product=tRNA-Arg NSLS01000031.1 tRNAscan-SE exon 21164 21237 . + . ID=exon-CLI77_08440-1;Parent=rna-CLI77_08440;anticodon=(pos:21198..21200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08440;product=tRNA-Arg NSLS01000031.1 Genbank gene 21273 21346 . + . ID=gene-CLI77_08445;Name=CLI77_08445;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_08445 NSLS01000031.1 tRNAscan-SE tRNA 21273 21346 . + . ID=rna-CLI77_08445;Parent=gene-CLI77_08445;anticodon=(pos:21307..21309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08445;product=tRNA-Arg NSLS01000031.1 tRNAscan-SE exon 21273 21346 . + . ID=exon-CLI77_08445-1;Parent=rna-CLI77_08445;anticodon=(pos:21307..21309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08445;product=tRNA-Arg NSLS01000031.1 Genbank gene 21405 22628 . + . ID=gene-CLI77_08450;Name=CLI77_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08450 NSLS01000031.1 Protein Homology CDS 21405 22628 . + 0 ID=cds-PDP48613.1;Parent=gene-CLI77_08450;Dbxref=NCBI_GP:PDP48613.1;Name=PDP48613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584428.1;locus_tag=CLI77_08450;product=hypothetical protein;protein_id=PDP48613.1;transl_table=11 NSLS01000031.1 Genbank gene 22936 25407 . - . ID=gene-CLI77_08455;Name=CLI77_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08455 NSLS01000031.1 Protein Homology CDS 22936 25407 . - 0 ID=cds-PDP48614.1;Parent=gene-CLI77_08455;Dbxref=NCBI_GP:PDP48614.1;Name=PDP48614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458093.1;locus_tag=CLI77_08455;product=bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase;protein_id=PDP48614.1;transl_table=11 NSLS01000031.1 Genbank gene 25443 26549 . - . ID=gene-CLI77_08460;Name=CLI77_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08460 NSLS01000031.1 Protein Homology CDS 25443 26549 . - 0 ID=cds-PDP48615.1;Parent=gene-CLI77_08460;Dbxref=NCBI_GP:PDP48615.1;Name=PDP48615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458092.1;locus_tag=CLI77_08460;product=GSCFA family protein;protein_id=PDP48615.1;transl_table=11 NSLS01000031.1 Genbank gene 26687 27172 . - . ID=gene-CLI77_08465;Name=CLI77_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08465 NSLS01000031.1 Protein Homology CDS 26687 27172 . - 0 ID=cds-PDP48616.1;Parent=gene-CLI77_08465;Dbxref=NCBI_GP:PDP48616.1;Name=PDP48616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815904.1;locus_tag=CLI77_08465;product=histidinol phosphate phosphatase;protein_id=PDP48616.1;transl_table=11 NSLS01000031.1 Genbank pseudogene 27275 27659 . + . ID=gene-CLI77_08470;Name=CLI77_08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08470;pseudo=true NSLS01000031.1 Protein Homology CDS 27275 27659 . + 0 ID=cds-CLI77_08470;Parent=gene-CLI77_08470;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_08470;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000032.1 1 23591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000032.1 Genbank region 1 23591 . + . ID=NSLS01000032.1:1..23591;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000032.1 Genbank gene 271 498 . - . ID=gene-CLI77_08475;Name=CLI77_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08475 NSLS01000032.1 Protein Homology CDS 271 498 . - 0 ID=cds-PDP48572.1;Parent=gene-CLI77_08475;Dbxref=NCBI_GP:PDP48572.1;Name=PDP48572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458015.1;locus_tag=CLI77_08475;product=hypothetical protein;protein_id=PDP48572.1;transl_table=11 NSLS01000032.1 Genbank gene 804 4757 . - . ID=gene-CLI77_08480;Name=CLI77_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08480 NSLS01000032.1 Protein Homology CDS 804 4757 . - 0 ID=cds-PDP48573.1;Parent=gene-CLI77_08480;Dbxref=NCBI_GP:PDP48573.1;Name=PDP48573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815528.1;locus_tag=CLI77_08480;product=DEAD/DEAH box helicase;protein_id=PDP48573.1;transl_table=11 NSLS01000032.1 Genbank gene 4767 5780 . - . ID=gene-CLI77_08485;Name=CLI77_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08485 NSLS01000032.1 Protein Homology CDS 4767 5780 . - 0 ID=cds-PDP48574.1;Parent=gene-CLI77_08485;Dbxref=NCBI_GP:PDP48574.1;Name=PDP48574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873496.1;locus_tag=CLI77_08485;product=restriction endonuclease subunit M;protein_id=PDP48574.1;transl_table=11 NSLS01000032.1 Genbank gene 6838 7932 . + . ID=gene-CLI77_08490;Name=CLI77_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08490 NSLS01000032.1 Protein Homology CDS 6838 7932 . + 0 ID=cds-PDP48575.1;Parent=gene-CLI77_08490;Dbxref=NCBI_GP:PDP48575.1;Name=PDP48575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956372.1;locus_tag=CLI77_08490;product=aminodeoxychorismate lyase;protein_id=PDP48575.1;transl_table=11 NSLS01000032.1 Genbank gene 7929 8678 . + . ID=gene-CLI77_08495;Name=CLI77_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08495 NSLS01000032.1 Protein Homology CDS 7929 8678 . + 0 ID=cds-PDP48576.1;Parent=gene-CLI77_08495;Dbxref=NCBI_GP:PDP48576.1;Name=PDP48576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965996.1;locus_tag=CLI77_08495;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=PDP48576.1;transl_table=11 NSLS01000032.1 Genbank gene 8675 9334 . + . ID=gene-CLI77_08500;Name=CLI77_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08500 NSLS01000032.1 Protein Homology CDS 8675 9334 . + 0 ID=cds-PDP48577.1;Parent=gene-CLI77_08500;Dbxref=NCBI_GP:PDP48577.1;Name=PDP48577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873487.1;locus_tag=CLI77_08500;product=lipoprotein-releasing system ATP-binding protein LolD;protein_id=PDP48577.1;transl_table=11 NSLS01000032.1 Genbank gene 9364 10068 . + . ID=gene-CLI77_08505;Name=CLI77_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08505 NSLS01000032.1 Protein Homology CDS 9364 10068 . + 0 ID=cds-PDP48578.1;Parent=gene-CLI77_08505;Dbxref=NCBI_GP:PDP48578.1;Name=PDP48578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965998.1;locus_tag=CLI77_08505;product=DNA-binding protein;protein_id=PDP48578.1;transl_table=11 NSLS01000032.1 Genbank gene 10075 10677 . + . ID=gene-CLI77_08510;Name=CLI77_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08510 NSLS01000032.1 Protein Homology CDS 10075 10677 . + 0 ID=cds-PDP48579.1;Parent=gene-CLI77_08510;Dbxref=NCBI_GP:PDP48579.1;Name=PDP48579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583963.1;locus_tag=CLI77_08510;product=threonylcarbamoyl-AMP synthase;protein_id=PDP48579.1;transl_table=11 NSLS01000032.1 Genbank gene 11156 11626 . + . ID=gene-CLI77_08515;Name=CLI77_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08515 NSLS01000032.1 Protein Homology CDS 11156 11626 . + 0 ID=cds-PDP48580.1;Parent=gene-CLI77_08515;Dbxref=NCBI_GP:PDP48580.1;Name=PDP48580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147156.1;locus_tag=CLI77_08515;product=transcription elongation factor GreA;protein_id=PDP48580.1;transl_table=11 NSLS01000032.1 Genbank gene 11641 12030 . + . ID=gene-CLI77_08520;Name=CLI77_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08520 NSLS01000032.1 Protein Homology CDS 11641 12030 . + 0 ID=cds-PDP48581.1;Parent=gene-CLI77_08520;Dbxref=NCBI_GP:PDP48581.1;Name=PDP48581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873501.1;locus_tag=CLI77_08520;product=HIT family protein;protein_id=PDP48581.1;transl_table=11 NSLS01000032.1 Genbank gene 12344 12604 . + . ID=gene-CLI77_08525;Name=CLI77_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08525 NSLS01000032.1 Protein Homology CDS 12344 12604 . + 0 ID=cds-PDP48582.1;Parent=gene-CLI77_08525;Dbxref=NCBI_GP:PDP48582.1;Name=PDP48582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004332192.1;locus_tag=CLI77_08525;product=hypothetical protein;protein_id=PDP48582.1;transl_table=11 NSLS01000032.1 Genbank gene 12844 13626 . + . ID=gene-CLI77_08530;Name=CLI77_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08530 NSLS01000032.1 Protein Homology CDS 12844 13626 . + 0 ID=cds-PDP48583.1;Parent=gene-CLI77_08530;Dbxref=NCBI_GP:PDP48583.1;Name=PDP48583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873492.1;locus_tag=CLI77_08530;product=DUF481 domain-containing protein;protein_id=PDP48583.1;transl_table=11 NSLS01000032.1 Genbank gene 14389 14865 . - . ID=gene-CLI77_08535;Name=CLI77_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08535 NSLS01000032.1 Protein Homology CDS 14389 14865 . - 0 ID=cds-PDP48584.1;Parent=gene-CLI77_08535;Dbxref=NCBI_GP:PDP48584.1;Name=PDP48584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583970.1;locus_tag=CLI77_08535;product=hypothetical protein;protein_id=PDP48584.1;transl_table=11 NSLS01000032.1 Genbank gene 14862 16148 . - . ID=gene-CLI77_08540;Name=CLI77_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08540 NSLS01000032.1 Protein Homology CDS 14862 16148 . - 0 ID=cds-PDP48585.1;Parent=gene-CLI77_08540;Dbxref=NCBI_GP:PDP48585.1;Name=PDP48585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583971.1;locus_tag=CLI77_08540;product=alpha-amylase;protein_id=PDP48585.1;transl_table=11 NSLS01000032.1 Genbank gene 16145 17407 . - . ID=gene-CLI77_08545;Name=CLI77_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08545 NSLS01000032.1 Protein Homology CDS 16145 17407 . - 0 ID=cds-PDP48586.1;Parent=gene-CLI77_08545;Dbxref=NCBI_GP:PDP48586.1;Name=PDP48586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457499.1;locus_tag=CLI77_08545;product=4-alpha-glucanotransferase;protein_id=PDP48586.1;transl_table=11 NSLS01000032.1 Genbank gene 17404 19380 . - . ID=gene-CLI77_08550;Name=CLI77_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08550 NSLS01000032.1 Protein Homology CDS 17404 19380 . - 0 ID=cds-PDP48587.1;Parent=gene-CLI77_08550;Dbxref=NCBI_GP:PDP48587.1;Name=PDP48587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873494.1;locus_tag=CLI77_08550;product=4-alpha-glucanotransferase;protein_id=PDP48587.1;transl_table=11 NSLS01000032.1 Genbank gene 19842 21872 . - . ID=gene-CLI77_08555;Name=CLI77_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08555 NSLS01000032.1 Protein Homology CDS 19842 21872 . - 0 ID=cds-PDP48588.1;Parent=gene-CLI77_08555;Dbxref=NCBI_GP:PDP48588.1;Name=PDP48588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347187.1;locus_tag=CLI77_08555;product=DUF87 domain-containing protein;protein_id=PDP48588.1;transl_table=11 NSLS01000032.1 Genbank gene 21901 23313 . - . ID=gene-CLI77_08560;Name=CLI77_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08560 NSLS01000032.1 Protein Homology CDS 21901 23313 . - 0 ID=cds-PDP48589.1;Parent=gene-CLI77_08560;Dbxref=NCBI_GP:PDP48589.1;Name=PDP48589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006951625.1;locus_tag=CLI77_08560;product=fibronectin-binding protein (FBP);protein_id=PDP48589.1;transl_table=11 NSLS01000032.1 Genbank gene 23426 23563 . - . ID=gene-CLI77_08565;Name=CLI77_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08565 NSLS01000032.1 Protein Homology CDS 23426 23563 . - 0 ID=cds-PDP48590.1;Parent=gene-CLI77_08565;Dbxref=NCBI_GP:PDP48590.1;Name=PDP48590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_08565;product=DNA methylase;protein_id=PDP48590.1;transl_table=11 ##sequence-region NSLS01000033.1 1 22665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000033.1 Genbank region 1 22665 . + . ID=NSLS01000033.1:1..22665;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000033.1 Genbank pseudogene 242 458 . - . ID=gene-CLI77_08570;Name=CLI77_08570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08570;pseudo=true NSLS01000033.1 Protein Homology CDS 242 458 . - 0 ID=cds-CLI77_08570;Parent=gene-CLI77_08570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815526.1;locus_tag=CLI77_08570;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000033.1 Genbank gene 782 2902 . - . ID=gene-CLI77_08575;Name=CLI77_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08575 NSLS01000033.1 Protein Homology CDS 782 2902 . - 0 ID=cds-PDP48543.1;Parent=gene-CLI77_08575;Dbxref=NCBI_GP:PDP48543.1;Name=PDP48543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965035.1;locus_tag=CLI77_08575;product=energy transducer TonB;protein_id=PDP48543.1;transl_table=11 NSLS01000033.1 Genbank gene 2916 4079 . - . ID=gene-CLI77_08580;Name=CLI77_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08580 NSLS01000033.1 Protein Homology CDS 2916 4079 . - 0 ID=cds-PDP48560.1;Parent=gene-CLI77_08580;Dbxref=NCBI_GP:PDP48560.1;Name=PDP48560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457697.1;locus_tag=CLI77_08580;product=adenosylcobinamide amidohydrolase;protein_id=PDP48560.1;transl_table=11 NSLS01000033.1 Genbank gene 4103 5104 . - . ID=gene-CLI77_08585;Name=CLI77_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08585 NSLS01000033.1 Protein Homology CDS 4103 5104 . - 0 ID=cds-PDP48544.1;Parent=gene-CLI77_08585;Dbxref=NCBI_GP:PDP48544.1;Name=PDP48544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965033.1;locus_tag=CLI77_08585;product=ABC transporter ATP-binding protein;protein_id=PDP48544.1;transl_table=11 NSLS01000033.1 Genbank gene 5112 6146 . - . ID=gene-CLI77_08590;Name=CLI77_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08590 NSLS01000033.1 Protein Homology CDS 5112 6146 . - 0 ID=cds-PDP48545.1;Parent=gene-CLI77_08590;Dbxref=NCBI_GP:PDP48545.1;Name=PDP48545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457699.1;locus_tag=CLI77_08590;product=iron ABC transporter permease;protein_id=PDP48545.1;transl_table=11 NSLS01000033.1 Genbank gene 6143 7318 . - . ID=gene-CLI77_08595;Name=CLI77_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08595 NSLS01000033.1 Protein Homology CDS 6143 7318 . - 0 ID=cds-PDP48546.1;Parent=gene-CLI77_08595;Dbxref=NCBI_GP:PDP48546.1;Name=PDP48546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965031.1;locus_tag=CLI77_08595;product=iron ABC transporter substrate-binding protein;protein_id=PDP48546.1;transl_table=11 NSLS01000033.1 cmsearch riboswitch 7465 7645 . - . ID=id-NSLS01000033.1:7465..7645;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000033.1 Genbank gene 7901 8485 . + . ID=gene-CLI77_08600;Name=CLI77_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08600 NSLS01000033.1 Protein Homology CDS 7901 8485 . + 0 ID=cds-PDP48547.1;Parent=gene-CLI77_08600;Dbxref=NCBI_GP:PDP48547.1;Name=PDP48547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873586.1;locus_tag=CLI77_08600;product=DUF3109 domain-containing protein;protein_id=PDP48547.1;transl_table=11 NSLS01000033.1 Genbank gene 8611 8994 . - . ID=gene-CLI77_08605;Name=CLI77_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08605 NSLS01000033.1 Protein Homology CDS 8611 8994 . - 0 ID=cds-PDP48548.1;Parent=gene-CLI77_08605;Dbxref=NCBI_GP:PDP48548.1;Name=PDP48548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965183.1;locus_tag=CLI77_08605;product=DUF3276 domain-containing protein;protein_id=PDP48548.1;transl_table=11 NSLS01000033.1 Genbank gene 9101 9652 . - . ID=gene-CLI77_08610;Name=CLI77_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08610 NSLS01000033.1 Protein Homology CDS 9101 9652 . - 0 ID=cds-PDP48549.1;Parent=gene-CLI77_08610;Dbxref=NCBI_GP:PDP48549.1;Name=PDP48549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873548.1;locus_tag=CLI77_08610;product=phosphohydrolase;protein_id=PDP48549.1;transl_table=11 NSLS01000033.1 Genbank gene 9679 9762 . - . ID=gene-CLI77_08615;Name=CLI77_08615;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_08615 NSLS01000033.1 tRNAscan-SE tRNA 9679 9762 . - . ID=rna-CLI77_08615;Parent=gene-CLI77_08615;anticodon=(pos:complement(9726..9728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08615;product=tRNA-Leu NSLS01000033.1 tRNAscan-SE exon 9679 9762 . - . ID=exon-CLI77_08615-1;Parent=rna-CLI77_08615;anticodon=(pos:complement(9726..9728));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08615;product=tRNA-Leu NSLS01000033.1 Genbank gene 9929 10231 . - . ID=gene-CLI77_08620;Name=CLI77_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08620 NSLS01000033.1 Protein Homology CDS 9929 10231 . - 0 ID=cds-PDP48550.1;Parent=gene-CLI77_08620;Dbxref=NCBI_GP:PDP48550.1;Name=PDP48550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457703.1;locus_tag=CLI77_08620;product=stress responsive protein;protein_id=PDP48550.1;transl_table=11 NSLS01000033.1 Genbank gene 10243 11484 . - . ID=gene-CLI77_08625;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CLI77_08625 NSLS01000033.1 Protein Homology CDS 10243 11484 . - 0 ID=cds-PDP48551.1;Parent=gene-CLI77_08625;Dbxref=NCBI_GP:PDP48551.1;Name=PDP48551.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585202.1;locus_tag=CLI77_08625;product=phosphoserine phosphatase SerB;protein_id=PDP48551.1;transl_table=11 NSLS01000033.1 Genbank gene 11543 12715 . - . ID=gene-CLI77_08630;Name=CLI77_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08630 NSLS01000033.1 Protein Homology CDS 11543 12715 . - 0 ID=cds-PDP48552.1;Parent=gene-CLI77_08630;Dbxref=NCBI_GP:PDP48552.1;Name=PDP48552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873571.1;locus_tag=CLI77_08630;product=T9SS C-terminal target domain-containing protein;protein_id=PDP48552.1;transl_table=11 NSLS01000033.1 Genbank gene 12968 13120 . - . ID=gene-CLI77_08635;Name=CLI77_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08635 NSLS01000033.1 Protein Homology CDS 12968 13120 . - 0 ID=cds-PDP48553.1;Parent=gene-CLI77_08635;Dbxref=NCBI_GP:PDP48553.1;Name=PDP48553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558970.1;locus_tag=CLI77_08635;product=50S ribosomal protein L34;protein_id=PDP48553.1;transl_table=11 NSLS01000033.1 Genbank gene 13182 13781 . - . ID=gene-CLI77_08640;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=CLI77_08640 NSLS01000033.1 Protein Homology CDS 13182 13781 . - 0 ID=cds-PDP48554.1;Parent=gene-CLI77_08640;Dbxref=NCBI_GP:PDP48554.1;Name=PDP48554.1;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964846.1;locus_tag=CLI77_08640;product=maf-like protein;protein_id=PDP48554.1;transl_table=11 NSLS01000033.1 Genbank gene 13821 14342 . - . ID=gene-CLI77_08645;Name=CLI77_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08645 NSLS01000033.1 Protein Homology CDS 13821 14342 . - 0 ID=cds-PDP48555.1;Parent=gene-CLI77_08645;Dbxref=NCBI_GP:PDP48555.1;Name=PDP48555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457706.1;locus_tag=CLI77_08645;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=PDP48555.1;transl_table=11 NSLS01000033.1 Genbank gene 14359 15171 . - . ID=gene-CLI77_08650;Name=CLI77_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08650 NSLS01000033.1 Protein Homology CDS 14359 15171 . - 0 ID=cds-PDP48556.1;Parent=gene-CLI77_08650;Dbxref=NCBI_GP:PDP48556.1;Name=PDP48556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964845.1;locus_tag=CLI77_08650;product=DUF2520 domain-containing protein;protein_id=PDP48556.1;transl_table=11 NSLS01000033.1 Genbank gene 15164 15718 . - . ID=gene-CLI77_08655;Name=CLI77_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08655 NSLS01000033.1 Protein Homology CDS 15164 15718 . - 0 ID=cds-PDP48557.1;Parent=gene-CLI77_08655;Dbxref=NCBI_GP:PDP48557.1;Name=PDP48557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585209.1;locus_tag=CLI77_08655;product=NAD(P)H nitroreductase;protein_id=PDP48557.1;transl_table=11 NSLS01000033.1 Genbank pseudogene 16068 16376 . - . ID=gene-CLI77_08660;Name=CLI77_08660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08660;pseudo=true NSLS01000033.1 Protein Homology CDS 16068 16376 . - 0 ID=cds-CLI77_08660;Parent=gene-CLI77_08660;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585276.1;locus_tag=CLI77_08660;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000033.1 Genbank gene 16455 17858 . + . ID=gene-CLI77_08665;Name=CLI77_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08665 NSLS01000033.1 Protein Homology CDS 16455 17858 . + 0 ID=cds-PDP48561.1;Parent=gene-CLI77_08665;Dbxref=NCBI_GP:PDP48561.1;Name=PDP48561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813154.1;locus_tag=CLI77_08665;product=glycosyl hydrolase;protein_id=PDP48561.1;transl_table=11 NSLS01000033.1 Genbank gene 17872 21243 . + . ID=gene-CLI77_08670;Name=CLI77_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08670 NSLS01000033.1 Protein Homology CDS 17872 21243 . + 0 ID=cds-PDP48558.1;Parent=gene-CLI77_08670;Dbxref=NCBI_GP:PDP48558.1;Name=PDP48558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457710.1;locus_tag=CLI77_08670;product=beta-galactosidase;protein_id=PDP48558.1;transl_table=11 NSLS01000033.1 Genbank gene 21326 22414 . + . ID=gene-CLI77_08675;Name=CLI77_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08675 NSLS01000033.1 Protein Homology CDS 21326 22414 . + 0 ID=cds-PDP48559.1;Parent=gene-CLI77_08675;Dbxref=NCBI_GP:PDP48559.1;Name=PDP48559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873569.1;locus_tag=CLI77_08675;product=aminoglycoside phosphotransferase;protein_id=PDP48559.1;transl_table=11 NSLS01000033.1 Genbank gene 22533 22637 . - . ID=gene-CLI77_08680;Name=CLI77_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08680 NSLS01000033.1 Protein Homology CDS 22533 22637 . - 0 ID=cds-PDP48562.1;Parent=gene-CLI77_08680;Dbxref=NCBI_GP:PDP48562.1;Name=PDP48562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_08680;product=DNA methylase;protein_id=PDP48562.1;transl_table=11 ##sequence-region NSLS01000034.1 1 21931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000034.1 Genbank region 1 21931 . + . ID=NSLS01000034.1:1..21931;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000034.1 Genbank gene 640 960 . + . ID=gene-CLI77_08685;Name=CLI77_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08685 NSLS01000034.1 Protein Homology CDS 640 960 . + 0 ID=cds-PDP48508.1;Parent=gene-CLI77_08685;Dbxref=NCBI_GP:PDP48508.1;Name=PDP48508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098431.1;locus_tag=CLI77_08685;product=transcriptional regulator;protein_id=PDP48508.1;transl_table=11 NSLS01000034.1 Genbank gene 964 2223 . + . ID=gene-CLI77_08690;Name=CLI77_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08690 NSLS01000034.1 Protein Homology CDS 964 2223 . + 0 ID=cds-PDP48509.1;Parent=gene-CLI77_08690;Dbxref=NCBI_GP:PDP48509.1;Name=PDP48509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965527.1;locus_tag=CLI77_08690;product=toxin HipA;protein_id=PDP48509.1;transl_table=11 NSLS01000034.1 Genbank gene 2558 2782 . + . ID=gene-CLI77_08695;Name=CLI77_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08695 NSLS01000034.1 Protein Homology CDS 2558 2782 . + 0 ID=cds-PDP48510.1;Parent=gene-CLI77_08695;Dbxref=NCBI_GP:PDP48510.1;Name=PDP48510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874043.1;locus_tag=CLI77_08695;product=transcriptional regulator;protein_id=PDP48510.1;transl_table=11 NSLS01000034.1 Genbank gene 2779 3114 . + . ID=gene-CLI77_08700;Name=CLI77_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08700 NSLS01000034.1 Protein Homology CDS 2779 3114 . + 0 ID=cds-PDP48511.1;Parent=gene-CLI77_08700;Dbxref=NCBI_GP:PDP48511.1;Name=PDP48511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874041.1;locus_tag=CLI77_08700;product=phosphatidylinositol kinase;protein_id=PDP48511.1;transl_table=11 NSLS01000034.1 Genbank gene 3104 4039 . + . ID=gene-CLI77_08705;Name=CLI77_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08705 NSLS01000034.1 Protein Homology CDS 3104 4039 . + 0 ID=cds-PDP48512.1;Parent=gene-CLI77_08705;Dbxref=NCBI_GP:PDP48512.1;Name=PDP48512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014223986.1;locus_tag=CLI77_08705;product=toxin HipA;protein_id=PDP48512.1;transl_table=11 NSLS01000034.1 Genbank pseudogene 4152 4497 . + . ID=gene-CLI77_08710;Name=CLI77_08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08710;pseudo=true NSLS01000034.1 Protein Homology CDS 4152 4497 . + 0 ID=cds-CLI77_08710;Parent=gene-CLI77_08710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098431.1;locus_tag=CLI77_08710;product=transcriptional regulator;pseudo=true;transl_table=11 NSLS01000034.1 Genbank gene 4500 5744 . + . ID=gene-CLI77_08715;Name=CLI77_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08715 NSLS01000034.1 GeneMarkS+ CDS 4500 5744 . + 0 ID=cds-PDP48513.1;Parent=gene-CLI77_08715;Dbxref=NCBI_GP:PDP48513.1;Name=PDP48513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_08715;product=hypothetical protein;protein_id=PDP48513.1;transl_table=11 NSLS01000034.1 Genbank gene 5725 6390 . + . ID=gene-CLI77_08720;Name=CLI77_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08720 NSLS01000034.1 GeneMarkS+ CDS 5725 6390 . + 0 ID=cds-PDP48514.1;Parent=gene-CLI77_08720;Dbxref=NCBI_GP:PDP48514.1;Name=PDP48514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_08720;product=hypothetical protein;protein_id=PDP48514.1;transl_table=11 NSLS01000034.1 Genbank gene 6377 8644 . + . ID=gene-CLI77_08725;Name=CLI77_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08725 NSLS01000034.1 Protein Homology CDS 6377 8644 . + 0 ID=cds-PDP48515.1;Parent=gene-CLI77_08725;Dbxref=NCBI_GP:PDP48515.1;Name=PDP48515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13476.4;locus_tag=CLI77_08725;product=hypothetical protein;protein_id=PDP48515.1;transl_table=11 NSLS01000034.1 Genbank gene 8740 9435 . - . ID=gene-CLI77_08730;Name=CLI77_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08730 NSLS01000034.1 Protein Homology CDS 8740 9435 . - 0 ID=cds-PDP48516.1;Parent=gene-CLI77_08730;Dbxref=NCBI_GP:PDP48516.1;Name=PDP48516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874182.1;locus_tag=CLI77_08730;product=hypothetical protein;protein_id=PDP48516.1;transl_table=11 NSLS01000034.1 Genbank gene 9432 10355 . - . ID=gene-CLI77_08735;Name=CLI77_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08735 NSLS01000034.1 Protein Homology CDS 9432 10355 . - 0 ID=cds-PDP48517.1;Parent=gene-CLI77_08735;Dbxref=NCBI_GP:PDP48517.1;Name=PDP48517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874212.1;locus_tag=CLI77_08735;product=mobilization protein;protein_id=PDP48517.1;transl_table=11 NSLS01000034.1 Genbank gene 10352 10699 . - . ID=gene-CLI77_08740;Name=CLI77_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08740 NSLS01000034.1 Protein Homology CDS 10352 10699 . - 0 ID=cds-PDP48529.1;Parent=gene-CLI77_08740;Dbxref=NCBI_GP:PDP48529.1;Name=PDP48529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336065.1;locus_tag=CLI77_08740;product=plasmid mobilization relaxosome protein MobC;protein_id=PDP48529.1;transl_table=11 NSLS01000034.1 Genbank gene 10821 11879 . - . ID=gene-CLI77_08745;Name=CLI77_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08745 NSLS01000034.1 Protein Homology CDS 10821 11879 . - 0 ID=cds-PDP48518.1;Parent=gene-CLI77_08745;Dbxref=NCBI_GP:PDP48518.1;Name=PDP48518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874198.1;locus_tag=CLI77_08745;product=hypothetical protein;protein_id=PDP48518.1;transl_table=11 NSLS01000034.1 Genbank gene 11977 13353 . - . ID=gene-CLI77_08750;Name=CLI77_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08750 NSLS01000034.1 Protein Homology CDS 11977 13353 . - 0 ID=cds-PDP48519.1;Parent=gene-CLI77_08750;Dbxref=NCBI_GP:PDP48519.1;Name=PDP48519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874156.1;locus_tag=CLI77_08750;product=hypothetical protein;protein_id=PDP48519.1;transl_table=11 NSLS01000034.1 Genbank gene 13363 13722 . - . ID=gene-CLI77_08755;Name=CLI77_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08755 NSLS01000034.1 Protein Homology CDS 13363 13722 . - 0 ID=cds-PDP48520.1;Parent=gene-CLI77_08755;Dbxref=NCBI_GP:PDP48520.1;Name=PDP48520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874216.1;locus_tag=CLI77_08755;product=DNA-binding protein;protein_id=PDP48520.1;transl_table=11 NSLS01000034.1 Genbank gene 13839 14537 . - . ID=gene-CLI77_08760;Name=CLI77_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08760 NSLS01000034.1 Protein Homology CDS 13839 14537 . - 0 ID=cds-PDP48521.1;Parent=gene-CLI77_08760;Dbxref=NCBI_GP:PDP48521.1;Name=PDP48521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874206.1;locus_tag=CLI77_08760;product=mobilization protein;protein_id=PDP48521.1;transl_table=11 NSLS01000034.1 Genbank gene 14642 15367 . - . ID=gene-CLI77_08765;Name=CLI77_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08765 NSLS01000034.1 GeneMarkS+ CDS 14642 15367 . - 0 ID=cds-PDP48522.1;Parent=gene-CLI77_08765;Dbxref=NCBI_GP:PDP48522.1;Name=PDP48522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_08765;product=hypothetical protein;protein_id=PDP48522.1;transl_table=11 NSLS01000034.1 Genbank gene 15339 15959 . - . ID=gene-CLI77_08770;Name=CLI77_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08770 NSLS01000034.1 GeneMarkS+ CDS 15339 15959 . - 0 ID=cds-PDP48523.1;Parent=gene-CLI77_08770;Dbxref=NCBI_GP:PDP48523.1;Name=PDP48523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_08770;product=hypothetical protein;protein_id=PDP48523.1;transl_table=11 NSLS01000034.1 Genbank gene 15992 17095 . - . ID=gene-CLI77_08775;Name=CLI77_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08775 NSLS01000034.1 Protein Homology CDS 15992 17095 . - 0 ID=cds-PDP48524.1;Parent=gene-CLI77_08775;Dbxref=NCBI_GP:PDP48524.1;Name=PDP48524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316495.1;locus_tag=CLI77_08775;product=integrase;protein_id=PDP48524.1;transl_table=11 NSLS01000034.1 Genbank gene 17184 18086 . - . ID=gene-CLI77_08780;Name=CLI77_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08780 NSLS01000034.1 Protein Homology CDS 17184 18086 . - 0 ID=cds-PDP48525.1;Parent=gene-CLI77_08780;Dbxref=NCBI_GP:PDP48525.1;Name=PDP48525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956146.1;locus_tag=CLI77_08780;product=MerR family transcriptional regulator;protein_id=PDP48525.1;transl_table=11 NSLS01000034.1 Genbank gene 18344 19768 . - . ID=gene-CLI77_08785;Name=CLI77_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08785 NSLS01000034.1 Protein Homology CDS 18344 19768 . - 0 ID=cds-PDP48526.1;Parent=gene-CLI77_08785;Dbxref=NCBI_GP:PDP48526.1;Name=PDP48526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815672.1;locus_tag=CLI77_08785;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=PDP48526.1;transl_table=11 NSLS01000034.1 Genbank gene 19932 20843 . - . ID=gene-CLI77_08790;Name=CLI77_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08790 NSLS01000034.1 Protein Homology CDS 19932 20843 . - 0 ID=cds-PDP48527.1;Parent=gene-CLI77_08790;Dbxref=NCBI_GP:PDP48527.1;Name=PDP48527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874194.1;locus_tag=CLI77_08790;product=hypothetical protein;protein_id=PDP48527.1;transl_table=11 NSLS01000034.1 Genbank pseudogene 21013 21198 . - . ID=gene-CLI77_08795;Name=CLI77_08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08795;pseudo=true NSLS01000034.1 Protein Homology CDS 21013 21198 . - 0 ID=cds-CLI77_08795;Parent=gene-CLI77_08795;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815676.1;locus_tag=CLI77_08795;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000034.1 Genbank gene 21304 21931 . - . ID=gene-CLI77_08800;Name=CLI77_08800;end_range=21931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08800;partial=true NSLS01000034.1 Protein Homology CDS 21304 21931 . - 1 ID=cds-PDP48528.1;Parent=gene-CLI77_08800;Dbxref=NCBI_GP:PDP48528.1;Name=PDP48528.1;end_range=21931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_08800;partial=true;product=IS3 family transposase;protein_id=PDP48528.1;transl_table=11 ##sequence-region NSLS01000035.1 1 20610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000035.1 Genbank region 1 20610 . + . ID=NSLS01000035.1:1..20610;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000035.1 Genbank pseudogene 45 679 . + . ID=gene-CLI77_08805;Name=CLI77_08805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08805;pseudo=true NSLS01000035.1 Protein Homology CDS 45 679 . + 0 ID=cds-CLI77_08805;Parent=gene-CLI77_08805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_08805;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000035.1 Genbank pseudogene 727 831 . + . ID=gene-CLI77_08810;Name=CLI77_08810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08810;pseudo=true NSLS01000035.1 Protein Homology CDS 727 831 . + 0 ID=cds-CLI77_08810;Parent=gene-CLI77_08810;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956163.1;locus_tag=CLI77_08810;product=DNA methylase;pseudo=true;transl_table=11 NSLS01000035.1 Genbank gene 897 2564 . - . ID=gene-CLI77_08815;Name=CLI77_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08815 NSLS01000035.1 Protein Homology CDS 897 2564 . - 0 ID=cds-PDP48478.1;Parent=gene-CLI77_08815;Dbxref=NCBI_GP:PDP48478.1;Name=PDP48478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585540.1;locus_tag=CLI77_08815;product=formate--tetrahydrofolate ligase;protein_id=PDP48478.1;transl_table=11 NSLS01000035.1 Genbank gene 2721 4055 . + . ID=gene-CLI77_08820;Name=CLI77_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08820 NSLS01000035.1 Protein Homology CDS 2721 4055 . + 0 ID=cds-PDP48479.1;Parent=gene-CLI77_08820;Dbxref=NCBI_GP:PDP48479.1;Name=PDP48479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965524.1;locus_tag=CLI77_08820;product=ribonuclease;protein_id=PDP48479.1;transl_table=11 NSLS01000035.1 Genbank gene 4103 4672 . - . ID=gene-CLI77_08825;Name=CLI77_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08825 NSLS01000035.1 Protein Homology CDS 4103 4672 . - 0 ID=cds-PDP48480.1;Parent=gene-CLI77_08825;Dbxref=NCBI_GP:PDP48480.1;Name=PDP48480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458038.1;locus_tag=CLI77_08825;product=crossover junction endodeoxyribonuclease RuvC;protein_id=PDP48480.1;transl_table=11 NSLS01000035.1 Genbank gene 4680 4988 . - . ID=gene-CLI77_08830;Name=CLI77_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08830 NSLS01000035.1 Protein Homology CDS 4680 4988 . - 0 ID=cds-PDP48481.1;Parent=gene-CLI77_08830;Dbxref=NCBI_GP:PDP48481.1;Name=PDP48481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458039.1;locus_tag=CLI77_08830;product=hypothetical protein;protein_id=PDP48481.1;transl_table=11 NSLS01000035.1 Genbank pseudogene 5077 5211 . + . ID=gene-CLI77_08835;Name=CLI77_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08835;pseudo=true NSLS01000035.1 Protein Homology CDS 5077 5211 . + 0 ID=cds-CLI77_08835;Parent=gene-CLI77_08835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875446.1;locus_tag=CLI77_08835;product=hemagglutinin;pseudo=true;transl_table=11 NSLS01000035.1 Genbank gene 5340 6650 . - . ID=gene-CLI77_08840;Name=CLI77_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08840 NSLS01000035.1 Protein Homology CDS 5340 6650 . - 0 ID=cds-PDP48482.1;Parent=gene-CLI77_08840;Dbxref=NCBI_GP:PDP48482.1;Name=PDP48482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458041.1;locus_tag=CLI77_08840;product=aminotransferase;protein_id=PDP48482.1;transl_table=11 NSLS01000035.1 Genbank gene 6693 8750 . - . ID=gene-CLI77_08845;Name=CLI77_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08845 NSLS01000035.1 Protein Homology CDS 6693 8750 . - 0 ID=cds-PDP48483.1;Parent=gene-CLI77_08845;Dbxref=NCBI_GP:PDP48483.1;Name=PDP48483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816662.1;locus_tag=CLI77_08845;product=CoA-binding protein;protein_id=PDP48483.1;transl_table=11 NSLS01000035.1 Genbank pseudogene 8917 9086 . + . ID=gene-CLI77_08850;Name=CLI77_08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08850;pseudo=true NSLS01000035.1 Protein Homology CDS 8917 9086 . + 0 ID=cds-CLI77_08850;Parent=gene-CLI77_08850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_08850;product=IS3 family transposase;pseudo=true;transl_table=11 NSLS01000035.1 Genbank gene 9112 9342 . - . ID=gene-CLI77_08855;Name=CLI77_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08855 NSLS01000035.1 Protein Homology CDS 9112 9342 . - 0 ID=cds-PDP48484.1;Parent=gene-CLI77_08855;Dbxref=NCBI_GP:PDP48484.1;Name=PDP48484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956523.1;locus_tag=CLI77_08855;product=hypothetical protein;protein_id=PDP48484.1;transl_table=11 NSLS01000035.1 Genbank gene 9788 10207 . + . ID=gene-CLI77_08860;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CLI77_08860 NSLS01000035.1 Protein Homology CDS 9788 10207 . + 0 ID=cds-PDP48485.1;Parent=gene-CLI77_08860;Dbxref=NCBI_GP:PDP48485.1;Name=PDP48485.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585532.1;locus_tag=CLI77_08860;product=large conductance mechanosensitive channel protein MscL;protein_id=PDP48485.1;transl_table=11 NSLS01000035.1 Genbank gene 10585 11742 . + . ID=gene-CLI77_08865;Name=CLI77_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08865 NSLS01000035.1 Protein Homology CDS 10585 11742 . + 0 ID=cds-PDP48486.1;Parent=gene-CLI77_08865;Dbxref=NCBI_GP:PDP48486.1;Name=PDP48486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331031.1;locus_tag=CLI77_08865;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;protein_id=PDP48486.1;transl_table=11 NSLS01000035.1 Genbank gene 11852 12166 . + . ID=gene-CLI77_08870;Name=CLI77_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08870 NSLS01000035.1 Protein Homology CDS 11852 12166 . + 0 ID=cds-PDP48487.1;Parent=gene-CLI77_08870;Dbxref=NCBI_GP:PDP48487.1;Name=PDP48487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965970.1;locus_tag=CLI77_08870;product=pyridine nucleotide transhydrogenase;protein_id=PDP48487.1;transl_table=11 NSLS01000035.1 Genbank gene 12163 14703 . + . ID=gene-CLI77_08875;Name=CLI77_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08875 NSLS01000035.1 Protein Homology CDS 12163 14703 . + 0 ID=cds-PDP48488.1;Parent=gene-CLI77_08875;Dbxref=NCBI_GP:PDP48488.1;Name=PDP48488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458043.1;locus_tag=CLI77_08875;product=NADP transhydrogenase subunit beta;protein_id=PDP48488.1;transl_table=11 NSLS01000035.1 Genbank gene 14850 16049 . - . ID=gene-CLI77_08880;Name=CLI77_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08880 NSLS01000035.1 Protein Homology CDS 14850 16049 . - 0 ID=cds-PDP48489.1;Parent=gene-CLI77_08880;Dbxref=NCBI_GP:PDP48489.1;Name=PDP48489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875239.1;locus_tag=CLI77_08880;product=hypothetical protein;protein_id=PDP48489.1;transl_table=11 NSLS01000035.1 Genbank gene 16046 17026 . - . ID=gene-CLI77_08885;Name=CLI77_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08885 NSLS01000035.1 Protein Homology CDS 16046 17026 . - 0 ID=cds-PDP48490.1;Parent=gene-CLI77_08885;Dbxref=NCBI_GP:PDP48490.1;Name=PDP48490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965643.1;locus_tag=CLI77_08885;product=SPFH/Band 7/PHB domain protein;protein_id=PDP48490.1;transl_table=11 NSLS01000035.1 Genbank gene 17054 17518 . - . ID=gene-CLI77_08890;Name=CLI77_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08890 NSLS01000035.1 Protein Homology CDS 17054 17518 . - 0 ID=cds-PDP48491.1;Parent=gene-CLI77_08890;Dbxref=NCBI_GP:PDP48491.1;Name=PDP48491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585524.1;locus_tag=CLI77_08890;product=NfeD family protein;protein_id=PDP48491.1;transl_table=11 NSLS01000035.1 Genbank gene 18057 18239 . + . ID=gene-CLI77_08895;Name=CLI77_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08895 NSLS01000035.1 Protein Homology CDS 18057 18239 . + 0 ID=cds-PDP48492.1;Parent=gene-CLI77_08895;Dbxref=NCBI_GP:PDP48492.1;Name=PDP48492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875236.1;locus_tag=CLI77_08895;product=hypothetical protein;protein_id=PDP48492.1;transl_table=11 NSLS01000035.1 Genbank gene 18552 18977 . + . ID=gene-CLI77_08900;Name=CLI77_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08900 NSLS01000035.1 Protein Homology CDS 18552 18977 . + 0 ID=cds-PDP48493.1;Parent=gene-CLI77_08900;Dbxref=NCBI_GP:PDP48493.1;Name=PDP48493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956286.1;locus_tag=CLI77_08900;product=umuD protein;protein_id=PDP48493.1;transl_table=11 NSLS01000035.1 Genbank gene 18985 20283 . + . ID=gene-CLI77_08905;Name=CLI77_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08905 NSLS01000035.1 Protein Homology CDS 18985 20283 . + 0 ID=cds-PDP48494.1;Parent=gene-CLI77_08905;Dbxref=NCBI_GP:PDP48494.1;Name=PDP48494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816656.1;locus_tag=CLI77_08905;product=ImpB/MucB/SamB family protein;protein_id=PDP48494.1;transl_table=11 NSLS01000035.1 Genbank pseudogene 20294 20508 . + . ID=gene-CLI77_08910;Name=CLI77_08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_08910;pseudo=true NSLS01000035.1 Protein Homology CDS 20294 20508 . + 0 ID=cds-CLI77_08910;Parent=gene-CLI77_08910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873891.1;locus_tag=CLI77_08910;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000036.1 1 19561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000036.1 Genbank region 1 19561 . + . ID=NSLS01000036.1:1..19561;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000036.1 Genbank gene 160 351 . + . ID=gene-CLI77_08915;Name=CLI77_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08915 NSLS01000036.1 Protein Homology CDS 160 351 . + 0 ID=cds-PDP48449.1;Parent=gene-CLI77_08915;Dbxref=NCBI_GP:PDP48449.1;Name=PDP48449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583455.1;locus_tag=CLI77_08915;product=hypothetical protein;protein_id=PDP48449.1;transl_table=11 NSLS01000036.1 Genbank gene 522 734 . + . ID=gene-CLI77_08920;Name=CLI77_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08920 NSLS01000036.1 Protein Homology CDS 522 734 . + 0 ID=cds-PDP48450.1;Parent=gene-CLI77_08920;Dbxref=NCBI_GP:PDP48450.1;Name=PDP48450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583456.1;locus_tag=CLI77_08920;product=hypothetical protein;protein_id=PDP48450.1;transl_table=11 NSLS01000036.1 Genbank gene 953 1456 . - . ID=gene-CLI77_08925;Name=CLI77_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08925 NSLS01000036.1 Protein Homology CDS 953 1456 . - 0 ID=cds-PDP48451.1;Parent=gene-CLI77_08925;Dbxref=NCBI_GP:PDP48451.1;Name=PDP48451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583457.1;locus_tag=CLI77_08925;product=RNA polymerase sigma factor;protein_id=PDP48451.1;transl_table=11 NSLS01000036.1 Genbank gene 1593 2012 . + . ID=gene-CLI77_08930;Name=CLI77_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08930 NSLS01000036.1 Protein Homology CDS 1593 2012 . + 0 ID=cds-PDP48452.1;Parent=gene-CLI77_08930;Dbxref=NCBI_GP:PDP48452.1;Name=PDP48452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815149.1;locus_tag=CLI77_08930;product=DUF1232 domain-containing protein;protein_id=PDP48452.1;transl_table=11 NSLS01000036.1 Genbank gene 2228 3505 . + . ID=gene-CLI77_08935;Name=CLI77_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08935 NSLS01000036.1 Protein Homology CDS 2228 3505 . + 0 ID=cds-PDP48453.1;Parent=gene-CLI77_08935;Dbxref=NCBI_GP:PDP48453.1;Name=PDP48453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005468802.1;locus_tag=CLI77_08935;product=enolase;protein_id=PDP48453.1;transl_table=11 NSLS01000036.1 Genbank gene 3637 4251 . - . ID=gene-CLI77_08940;Name=CLI77_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08940 NSLS01000036.1 Protein Homology CDS 3637 4251 . - 0 ID=cds-PDP48454.1;Parent=gene-CLI77_08940;Dbxref=NCBI_GP:PDP48454.1;Name=PDP48454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583460.1;locus_tag=CLI77_08940;product=PorT family protein;protein_id=PDP48454.1;transl_table=11 NSLS01000036.1 Genbank gene 4498 4573 . + . ID=gene-CLI77_08945;Name=CLI77_08945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_08945 NSLS01000036.1 tRNAscan-SE tRNA 4498 4573 . + . ID=rna-CLI77_08945;Parent=gene-CLI77_08945;anticodon=(pos:4531..4533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08945;product=tRNA-Lys NSLS01000036.1 tRNAscan-SE exon 4498 4573 . + . ID=exon-CLI77_08945-1;Parent=rna-CLI77_08945;anticodon=(pos:4531..4533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_08945;product=tRNA-Lys NSLS01000036.1 Genbank gene 5137 5748 . + . ID=gene-CLI77_08950;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=CLI77_08950 NSLS01000036.1 Protein Homology CDS 5137 5748 . + 0 ID=cds-PDP48455.1;Parent=gene-CLI77_08950;Dbxref=NCBI_GP:PDP48455.1;Name=PDP48455.1;gbkey=CDS;gene=nrfH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956414.1;locus_tag=CLI77_08950;product=cytochrome c nitrite reductase small subunit;protein_id=PDP48455.1;transl_table=11 NSLS01000036.1 Genbank gene 5770 7266 . + . ID=gene-CLI77_08955;Name=CLI77_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08955 NSLS01000036.1 Protein Homology CDS 5770 7266 . + 0 ID=cds-PDP48456.1;Parent=gene-CLI77_08955;Dbxref=NCBI_GP:PDP48456.1;Name=PDP48456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583462.1;locus_tag=CLI77_08955;product=ammonia-forming cytochrome c nitrite reductase;protein_id=PDP48456.1;transl_table=11 NSLS01000036.1 Genbank gene 7337 8632 . + . ID=gene-CLI77_08960;Name=CLI77_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08960 NSLS01000036.1 Protein Homology CDS 7337 8632 . + 0 ID=cds-PDP48457.1;Parent=gene-CLI77_08960;Dbxref=NCBI_GP:PDP48457.1;Name=PDP48457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458503.1;locus_tag=CLI77_08960;product=hypothetical protein;protein_id=PDP48457.1;transl_table=11 NSLS01000036.1 Genbank gene 8625 9440 . + . ID=gene-CLI77_08965;Name=CLI77_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08965 NSLS01000036.1 Protein Homology CDS 8625 9440 . + 0 ID=cds-PDP48458.1;Parent=gene-CLI77_08965;Dbxref=NCBI_GP:PDP48458.1;Name=PDP48458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458504.1;locus_tag=CLI77_08965;product=cytochrome C assembly protein;protein_id=PDP48458.1;transl_table=11 NSLS01000036.1 Genbank gene 9709 10230 . + . ID=gene-CLI77_08970;Name=CLI77_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08970 NSLS01000036.1 Protein Homology CDS 9709 10230 . + 0 ID=cds-PDP48459.1;Parent=gene-CLI77_08970;Dbxref=NCBI_GP:PDP48459.1;Name=PDP48459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965263.1;locus_tag=CLI77_08970;product=flavodoxin family protein;protein_id=PDP48459.1;transl_table=11 NSLS01000036.1 Genbank gene 10227 10991 . + . ID=gene-CLI77_08975;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CLI77_08975 NSLS01000036.1 Protein Homology CDS 10227 10991 . + 0 ID=cds-PDP48460.1;Parent=gene-CLI77_08975;Dbxref=NCBI_GP:PDP48460.1;Name=PDP48460.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458505.1;locus_tag=CLI77_08975;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=PDP48460.1;transl_table=11 NSLS01000036.1 Genbank gene 11033 13054 . + . ID=gene-CLI77_08980;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CLI77_08980 NSLS01000036.1 Protein Homology CDS 11033 13054 . + 0 ID=cds-PDP48461.1;Parent=gene-CLI77_08980;Dbxref=NCBI_GP:PDP48461.1;Name=PDP48461.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965265.1;locus_tag=CLI77_08980;product=DNA primase;protein_id=PDP48461.1;transl_table=11 NSLS01000036.1 Genbank gene 13286 13513 . + . ID=gene-CLI77_08985;Name=CLI77_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08985 NSLS01000036.1 Protein Homology CDS 13286 13513 . + 0 ID=cds-PDP48462.1;Parent=gene-CLI77_08985;Dbxref=NCBI_GP:PDP48462.1;Name=PDP48462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583469.1;locus_tag=CLI77_08985;product=ferredoxin;protein_id=PDP48462.1;transl_table=11 NSLS01000036.1 Genbank gene 13532 14614 . + . ID=gene-CLI77_08990;Name=CLI77_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08990 NSLS01000036.1 Protein Homology CDS 13532 14614 . + 0 ID=cds-PDP48463.1;Parent=gene-CLI77_08990;Dbxref=NCBI_GP:PDP48463.1;Name=PDP48463.1;Note=catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815154.1;locus_tag=CLI77_08990;product=3-methyl-2-oxobutanoate dehydrogenase subunit VorB;protein_id=PDP48463.1;transl_table=11 NSLS01000036.1 Genbank gene 14635 14814 . + . ID=gene-CLI77_08995;Name=CLI77_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_08995 NSLS01000036.1 Protein Homology CDS 14635 14814 . + 0 ID=cds-PDP48464.1;Parent=gene-CLI77_08995;Dbxref=NCBI_GP:PDP48464.1;Name=PDP48464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965267.1;locus_tag=CLI77_08995;product=hypothetical protein;protein_id=PDP48464.1;transl_table=11 NSLS01000036.1 Genbank gene 14831 15595 . + . ID=gene-CLI77_09000;Name=CLI77_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09000 NSLS01000036.1 Protein Homology CDS 14831 15595 . + 0 ID=cds-PDP48465.1;Parent=gene-CLI77_09000;Dbxref=NCBI_GP:PDP48465.1;Name=PDP48465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147357.1;locus_tag=CLI77_09000;product=2-oxoglutarate oxidoreductase;protein_id=PDP48465.1;transl_table=11 NSLS01000036.1 Genbank gene 15624 16169 . + . ID=gene-CLI77_09005;Name=CLI77_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09005 NSLS01000036.1 Protein Homology CDS 15624 16169 . + 0 ID=cds-PDP48466.1;Parent=gene-CLI77_09005;Dbxref=NCBI_GP:PDP48466.1;Name=PDP48466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458509.1;locus_tag=CLI77_09005;product=2-oxoglutarate ferredoxin oxidoreductase subunit gamma;protein_id=PDP48466.1;transl_table=11 NSLS01000036.1 Genbank gene 16420 18708 . + . ID=gene-CLI77_09010;Name=CLI77_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09010 NSLS01000036.1 Protein Homology CDS 16420 18708 . + 0 ID=cds-PDP48467.1;Parent=gene-CLI77_09010;Dbxref=NCBI_GP:PDP48467.1;Name=PDP48467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815156.1;locus_tag=CLI77_09010;product=GTP pyrophosphokinase;protein_id=PDP48467.1;transl_table=11 NSLS01000036.1 Genbank gene 18934 19561 . - . ID=gene-CLI77_09015;Name=CLI77_09015;end_range=19561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09015;partial=true NSLS01000036.1 Protein Homology CDS 18934 19561 . - 1 ID=cds-PDP48468.1;Parent=gene-CLI77_09015;Dbxref=NCBI_GP:PDP48468.1;Name=PDP48468.1;end_range=19561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_09015;partial=true;product=IS3 family transposase;protein_id=PDP48468.1;transl_table=11 ##sequence-region NSLS01000037.1 1 18851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000037.1 Genbank region 1 18851 . + . ID=NSLS01000037.1:1..18851;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000037.1 Genbank gene 148 774 . - . ID=gene-CLI77_09020;Name=CLI77_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09020 NSLS01000037.1 Protein Homology CDS 148 774 . - 0 ID=cds-PDP48418.1;Parent=gene-CLI77_09020;Dbxref=NCBI_GP:PDP48418.1;Name=PDP48418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341658.1;locus_tag=CLI77_09020;product=hypothetical protein;protein_id=PDP48418.1;transl_table=11 NSLS01000037.1 Genbank gene 771 1124 . - . ID=gene-CLI77_09025;Name=CLI77_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09025 NSLS01000037.1 Protein Homology CDS 771 1124 . - 0 ID=cds-PDP48434.1;Parent=gene-CLI77_09025;Dbxref=NCBI_GP:PDP48434.1;Name=PDP48434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341656.1;locus_tag=CLI77_09025;product=DUF3408 domain-containing protein;protein_id=PDP48434.1;transl_table=11 NSLS01000037.1 Genbank gene 1150 1578 . - . ID=gene-CLI77_09030;Name=CLI77_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09030 NSLS01000037.1 Protein Homology CDS 1150 1578 . - 0 ID=cds-PDP48419.1;Parent=gene-CLI77_09030;Dbxref=NCBI_GP:PDP48419.1;Name=PDP48419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920036.1;locus_tag=CLI77_09030;product=DUF3408 domain-containing protein;protein_id=PDP48419.1;transl_table=11 NSLS01000037.1 Genbank gene 1562 2344 . - . ID=gene-CLI77_09035;Name=CLI77_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09035 NSLS01000037.1 Protein Homology CDS 1562 2344 . - 0 ID=cds-PDP48420.1;Parent=gene-CLI77_09035;Dbxref=NCBI_GP:PDP48420.1;Name=PDP48420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018920037.1;locus_tag=CLI77_09035;product=conjugal transfer protein TraA;protein_id=PDP48420.1;transl_table=11 NSLS01000037.1 Genbank pseudogene 2833 3086 . - . ID=gene-CLI77_09040;Name=CLI77_09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09040;pseudo=true NSLS01000037.1 Protein Homology CDS 2833 3086 . - 0 ID=cds-CLI77_09040;Parent=gene-CLI77_09040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371350.1;locus_tag=CLI77_09040;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000037.1 Genbank gene 3139 3552 . + . ID=gene-CLI77_09045;Name=CLI77_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09045 NSLS01000037.1 Protein Homology CDS 3139 3552 . + 0 ID=cds-PDP48421.1;Parent=gene-CLI77_09045;Dbxref=NCBI_GP:PDP48421.1;Name=PDP48421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347045.1;locus_tag=CLI77_09045;product=hypothetical protein;protein_id=PDP48421.1;transl_table=11 NSLS01000037.1 Genbank gene 3537 4766 . + . ID=gene-CLI77_09050;Name=CLI77_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09050 NSLS01000037.1 Protein Homology CDS 3537 4766 . + 0 ID=cds-PDP48422.1;Parent=gene-CLI77_09050;Dbxref=NCBI_GP:PDP48422.1;Name=PDP48422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004366599.1;locus_tag=CLI77_09050;product=mobilization protein;protein_id=PDP48422.1;transl_table=11 NSLS01000037.1 Genbank gene 4782 6794 . + . ID=gene-CLI77_09055;Name=CLI77_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09055 NSLS01000037.1 Protein Homology CDS 4782 6794 . + 0 ID=cds-PDP48423.1;Parent=gene-CLI77_09055;Dbxref=NCBI_GP:PDP48423.1;Name=PDP48423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815814.1;locus_tag=CLI77_09055;product=conjugal transfer protein TraG;protein_id=PDP48423.1;transl_table=11 NSLS01000037.1 Genbank gene 6860 7303 . + . ID=gene-CLI77_09060;Name=CLI77_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09060 NSLS01000037.1 Protein Homology CDS 6860 7303 . + 0 ID=cds-PDP48424.1;Parent=gene-CLI77_09060;Dbxref=NCBI_GP:PDP48424.1;Name=PDP48424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362412.1;locus_tag=CLI77_09060;product=hypothetical protein;protein_id=PDP48424.1;transl_table=11 NSLS01000037.1 Genbank gene 7360 7749 . - . ID=gene-CLI77_09065;Name=CLI77_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09065 NSLS01000037.1 Protein Homology CDS 7360 7749 . - 0 ID=cds-PDP48425.1;Parent=gene-CLI77_09065;Dbxref=NCBI_GP:PDP48425.1;Name=PDP48425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847493.1;locus_tag=CLI77_09065;product=RteC domain protein;protein_id=PDP48425.1;transl_table=11 NSLS01000037.1 Genbank gene 7706 7960 . - . ID=gene-CLI77_09070;Name=CLI77_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09070 NSLS01000037.1 GeneMarkS+ CDS 7706 7960 . - 0 ID=cds-PDP48426.1;Parent=gene-CLI77_09070;Dbxref=NCBI_GP:PDP48426.1;Name=PDP48426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_09070;product=hypothetical protein;protein_id=PDP48426.1;transl_table=11 NSLS01000037.1 Genbank gene 8010 8504 . - . ID=gene-CLI77_09075;Name=CLI77_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09075 NSLS01000037.1 Protein Homology CDS 8010 8504 . - 0 ID=cds-PDP48427.1;Parent=gene-CLI77_09075;Dbxref=NCBI_GP:PDP48427.1;Name=PDP48427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584320.1;locus_tag=CLI77_09075;product=hypothetical protein;protein_id=PDP48427.1;transl_table=11 NSLS01000037.1 Genbank gene 8506 10725 . - . ID=gene-CLI77_09080;Name=CLI77_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09080 NSLS01000037.1 Protein Homology CDS 8506 10725 . - 0 ID=cds-PDP48428.1;Parent=gene-CLI77_09080;Dbxref=NCBI_GP:PDP48428.1;Name=PDP48428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364871.1;locus_tag=CLI77_09080;product=ABC transporter ATP-binding protein;protein_id=PDP48428.1;transl_table=11 NSLS01000037.1 Genbank gene 10846 13131 . - . ID=gene-CLI77_09085;Name=CLI77_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09085 NSLS01000037.1 Protein Homology CDS 10846 13131 . - 0 ID=cds-PDP48429.1;Parent=gene-CLI77_09085;Dbxref=NCBI_GP:PDP48429.1;Name=PDP48429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584318.1;locus_tag=CLI77_09085;product=hypothetical protein;protein_id=PDP48429.1;transl_table=11 NSLS01000037.1 Genbank gene 13128 14426 . - . ID=gene-CLI77_09090;Name=CLI77_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09090 NSLS01000037.1 Protein Homology CDS 13128 14426 . - 0 ID=cds-PDP48430.1;Parent=gene-CLI77_09090;Dbxref=NCBI_GP:PDP48430.1;Name=PDP48430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584317.1;locus_tag=CLI77_09090;product=radical SAM protein;protein_id=PDP48430.1;transl_table=11 NSLS01000037.1 Genbank gene 14933 16090 . - . ID=gene-CLI77_09095;Name=CLI77_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09095 NSLS01000037.1 Protein Homology CDS 14933 16090 . - 0 ID=cds-PDP48431.1;Parent=gene-CLI77_09095;Dbxref=NCBI_GP:PDP48431.1;Name=PDP48431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584316.1;locus_tag=CLI77_09095;product=hypothetical protein;protein_id=PDP48431.1;transl_table=11 NSLS01000037.1 Genbank gene 16103 16711 . - . ID=gene-CLI77_09100;Name=CLI77_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09100 NSLS01000037.1 Protein Homology CDS 16103 16711 . - 0 ID=cds-PDP48432.1;Parent=gene-CLI77_09100;Dbxref=NCBI_GP:PDP48432.1;Name=PDP48432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584315.1;locus_tag=CLI77_09100;product=TetR/AcrR family transcriptional regulator;protein_id=PDP48432.1;transl_table=11 NSLS01000037.1 Genbank gene 16934 18328 . + . ID=gene-CLI77_09105;Name=CLI77_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09105 NSLS01000037.1 Protein Homology CDS 16934 18328 . + 0 ID=cds-PDP48433.1;Parent=gene-CLI77_09105;Dbxref=NCBI_GP:PDP48433.1;Name=PDP48433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014298130.1;locus_tag=CLI77_09105;product=hypothetical protein;protein_id=PDP48433.1;transl_table=11 NSLS01000037.1 Genbank pseudogene 18363 18722 . + . ID=gene-CLI77_09110;Name=CLI77_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09110;pseudo=true NSLS01000037.1 Protein Homology CDS 18363 18722 . + 0 ID=cds-CLI77_09110;Parent=gene-CLI77_09110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457228.1;locus_tag=CLI77_09110;product=DNA topoisomerase I;pseudo=true;transl_table=11 ##sequence-region NSLS01000038.1 1 16600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000038.1 Genbank region 1 16600 . + . ID=NSLS01000038.1:1..16600;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000038.1 Genbank gene 45 1130 . + . ID=gene-CLI77_09115;Name=CLI77_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09115 NSLS01000038.1 Protein Homology CDS 45 1130 . + 0 ID=cds-PDP48395.1;Parent=gene-CLI77_09115;Dbxref=NCBI_GP:PDP48395.1;Name=PDP48395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_09115;product=IS5/IS1182 family transposase;protein_id=PDP48395.1;transl_table=11 NSLS01000038.1 Genbank gene 1143 1295 . + . ID=gene-CLI77_09120;Name=CLI77_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09120 NSLS01000038.1 Protein Homology CDS 1143 1295 . + 0 ID=cds-PDP48396.1;Parent=gene-CLI77_09120;Dbxref=NCBI_GP:PDP48396.1;Name=PDP48396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_09120;product=DNA methylase;protein_id=PDP48396.1;transl_table=11 NSLS01000038.1 Genbank pseudogene 1280 1750 . - . ID=gene-CLI77_09125;Name=CLI77_09125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09125;pseudo=true NSLS01000038.1 Protein Homology CDS 1280 1750 . - 0 ID=cds-CLI77_09125;Parent=gene-CLI77_09125;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815122.1;locus_tag=CLI77_09125;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000038.1 Genbank gene 1798 4383 . - . ID=gene-CLI77_09130;Name=CLI77_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09130 NSLS01000038.1 Protein Homology CDS 1798 4383 . - 0 ID=cds-PDP48397.1;Parent=gene-CLI77_09130;Dbxref=NCBI_GP:PDP48397.1;Name=PDP48397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965126.1;locus_tag=CLI77_09130;product=beta-mannosidase;protein_id=PDP48397.1;transl_table=11 NSLS01000038.1 Genbank gene 4413 5711 . - . ID=gene-CLI77_09135;Name=CLI77_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09135 NSLS01000038.1 Protein Homology CDS 4413 5711 . - 0 ID=cds-PDP48398.1;Parent=gene-CLI77_09135;Dbxref=NCBI_GP:PDP48398.1;Name=PDP48398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815124.1;locus_tag=CLI77_09135;product=DNA recombination protein RmuC;protein_id=PDP48398.1;transl_table=11 NSLS01000038.1 Genbank pseudogene 5807 6074 . + . ID=gene-CLI77_09140;Name=CLI77_09140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09140;pseudo=true NSLS01000038.1 Protein Homology CDS 5807 6074 . + 0 ID=cds-CLI77_09140;Parent=gene-CLI77_09140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816263.1;locus_tag=CLI77_09140;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000038.1 Genbank gene 6406 6720 . - . ID=gene-CLI77_09145;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CLI77_09145 NSLS01000038.1 Protein Homology CDS 6406 6720 . - 0 ID=cds-PDP48399.1;Parent=gene-CLI77_09145;Dbxref=NCBI_GP:PDP48399.1;Name=PDP48399.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583434.1;locus_tag=CLI77_09145;product=thioredoxin;protein_id=PDP48399.1;transl_table=11 NSLS01000038.1 Genbank gene 6769 10455 . - . ID=gene-CLI77_09150;Name=CLI77_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09150 NSLS01000038.1 Protein Homology CDS 6769 10455 . - 0 ID=cds-PDP48400.1;Parent=gene-CLI77_09150;Dbxref=NCBI_GP:PDP48400.1;Name=PDP48400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457185.1;locus_tag=CLI77_09150;product=DNA polymerase III subunit alpha;protein_id=PDP48400.1;transl_table=11 NSLS01000038.1 Genbank gene 10734 11099 . + . ID=gene-CLI77_09155;Name=CLI77_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09155 NSLS01000038.1 Protein Homology CDS 10734 11099 . + 0 ID=cds-PDP48401.1;Parent=gene-CLI77_09155;Dbxref=NCBI_GP:PDP48401.1;Name=PDP48401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583436.1;locus_tag=CLI77_09155;product=50S ribosomal protein L19;protein_id=PDP48401.1;transl_table=11 NSLS01000038.1 Genbank gene 11506 11760 . + . ID=gene-CLI77_09160;Name=CLI77_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09160 NSLS01000038.1 Protein Homology CDS 11506 11760 . + 0 ID=cds-PDP48402.1;Parent=gene-CLI77_09160;Dbxref=NCBI_GP:PDP48402.1;Name=PDP48402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583437.1;locus_tag=CLI77_09160;product=transposase;protein_id=PDP48402.1;transl_table=11 NSLS01000038.1 Genbank gene 12331 13611 . + . ID=gene-CLI77_09165;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CLI77_09165 NSLS01000038.1 Protein Homology CDS 12331 13611 . + 0 ID=cds-PDP48403.1;Parent=gene-CLI77_09165;Dbxref=NCBI_GP:PDP48403.1;Name=PDP48403.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007835317.1;locus_tag=CLI77_09165;product=serine hydroxymethyltransferase;protein_id=PDP48403.1;transl_table=11 NSLS01000038.1 Genbank gene 13768 16101 . + . ID=gene-CLI77_09170;Name=CLI77_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09170 NSLS01000038.1 Protein Homology CDS 13768 16101 . + 0 ID=cds-PDP48404.1;Parent=gene-CLI77_09170;Dbxref=NCBI_GP:PDP48404.1;Name=PDP48404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873538.1;locus_tag=CLI77_09170;product=beta-hexosaminidase;protein_id=PDP48404.1;transl_table=11 ##sequence-region NSLS01000039.1 1 16516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000039.1 Genbank region 1 16516 . + . ID=NSLS01000039.1:1..16516;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000039.1 Genbank gene 506 1654 . + . ID=gene-CLI77_09175;Name=CLI77_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09175 NSLS01000039.1 Protein Homology CDS 506 1654 . + 0 ID=cds-PDP48370.1;Parent=gene-CLI77_09175;Dbxref=NCBI_GP:PDP48370.1;Name=PDP48370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583492.1;locus_tag=CLI77_09175;product=8-amino-7-oxononanoate synthase;protein_id=PDP48370.1;transl_table=11 NSLS01000039.1 Genbank gene 1654 2073 . + . ID=gene-CLI77_09180;Name=CLI77_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09180 NSLS01000039.1 Protein Homology CDS 1654 2073 . + 0 ID=cds-PDP48371.1;Parent=gene-CLI77_09180;Dbxref=NCBI_GP:PDP48371.1;Name=PDP48371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815945.1;locus_tag=CLI77_09180;product=hypothetical protein;protein_id=PDP48371.1;transl_table=11 NSLS01000039.1 Genbank gene 2077 2502 . + . ID=gene-CLI77_09185;Name=CLI77_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09185 NSLS01000039.1 Protein Homology CDS 2077 2502 . + 0 ID=cds-PDP48372.1;Parent=gene-CLI77_09185;Dbxref=NCBI_GP:PDP48372.1;Name=PDP48372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874996.1;locus_tag=CLI77_09185;product=hypothetical protein;protein_id=PDP48372.1;transl_table=11 NSLS01000039.1 Genbank gene 2615 3016 . - . ID=gene-CLI77_09190;Name=CLI77_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09190 NSLS01000039.1 Protein Homology CDS 2615 3016 . - 0 ID=cds-PDP48382.1;Parent=gene-CLI77_09190;Dbxref=NCBI_GP:PDP48382.1;Name=PDP48382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874998.1;locus_tag=CLI77_09190;product=polyketide cyclase;protein_id=PDP48382.1;transl_table=11 NSLS01000039.1 Genbank pseudogene 3131 4643 . - . ID=gene-CLI77_09195;Name=CLI77_09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09195;pseudo=true NSLS01000039.1 Protein Homology CDS 3131 4643 . - 0 ID=cds-CLI77_09195;Parent=gene-CLI77_09195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019149558.1;locus_tag=CLI77_09195;product=transcriptional regulator;pseudo=true;transl_table=11 NSLS01000039.1 Genbank pseudogene 4697 5153 . - . ID=gene-CLI77_09200;Name=CLI77_09200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09200;pseudo=true NSLS01000039.1 Protein Homology CDS 4697 5153 . - 0 ID=cds-CLI77_09200;Parent=gene-CLI77_09200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457892.1;locus_tag=CLI77_09200;product=N-acetyltransferase;pseudo=true;transl_table=11 NSLS01000039.1 Genbank gene 5268 6614 . - . ID=gene-CLI77_09205;Name=CLI77_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09205 NSLS01000039.1 Protein Homology CDS 5268 6614 . - 0 ID=cds-PDP48373.1;Parent=gene-CLI77_09205;Dbxref=NCBI_GP:PDP48373.1;Name=PDP48373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360121.1;locus_tag=CLI77_09205;product=transcriptional regulator;protein_id=PDP48373.1;transl_table=11 NSLS01000039.1 Genbank gene 6673 7719 . - . ID=gene-CLI77_09210;Name=CLI77_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09210 NSLS01000039.1 Protein Homology CDS 6673 7719 . - 0 ID=cds-PDP48374.1;Parent=gene-CLI77_09210;Dbxref=NCBI_GP:PDP48374.1;Name=PDP48374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457890.1;locus_tag=CLI77_09210;product=hypothetical protein;protein_id=PDP48374.1;transl_table=11 NSLS01000039.1 Genbank gene 7774 7986 . - . ID=gene-CLI77_09215;Name=CLI77_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09215 NSLS01000039.1 Protein Homology CDS 7774 7986 . - 0 ID=cds-PDP48375.1;Parent=gene-CLI77_09215;Dbxref=NCBI_GP:PDP48375.1;Name=PDP48375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016749018.1;locus_tag=CLI77_09215;product=KTSC domain-containing protein;protein_id=PDP48375.1;transl_table=11 NSLS01000039.1 Genbank gene 8004 9881 . - . ID=gene-CLI77_09220;Name=CLI77_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09220 NSLS01000039.1 Protein Homology CDS 8004 9881 . - 0 ID=cds-PDP48376.1;Parent=gene-CLI77_09220;Dbxref=NCBI_GP:PDP48376.1;Name=PDP48376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233210.1;locus_tag=CLI77_09220;product=DUF853 domain-containing protein;protein_id=PDP48376.1;transl_table=11 NSLS01000039.1 Genbank gene 9871 11082 . - . ID=gene-CLI77_09225;Name=CLI77_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09225 NSLS01000039.1 Protein Homology CDS 9871 11082 . - 0 ID=cds-PDP48383.1;Parent=gene-CLI77_09225;Dbxref=NCBI_GP:PDP48383.1;Name=PDP48383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457888.1;locus_tag=CLI77_09225;product=SIR2 family protein;protein_id=PDP48383.1;transl_table=11 NSLS01000039.1 Genbank gene 11157 11372 . - . ID=gene-CLI77_09230;Name=CLI77_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09230 NSLS01000039.1 Protein Homology CDS 11157 11372 . - 0 ID=cds-PDP48377.1;Parent=gene-CLI77_09230;Dbxref=NCBI_GP:PDP48377.1;Name=PDP48377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004332174.1;locus_tag=CLI77_09230;product=XRE family transcriptional regulator;protein_id=PDP48377.1;transl_table=11 NSLS01000039.1 Genbank gene 11490 12197 . - . ID=gene-CLI77_09235;Name=CLI77_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09235 NSLS01000039.1 Protein Homology CDS 11490 12197 . - 0 ID=cds-PDP48384.1;Parent=gene-CLI77_09235;Dbxref=NCBI_GP:PDP48384.1;Name=PDP48384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224131.1;locus_tag=CLI77_09235;product=hypothetical protein;protein_id=PDP48384.1;transl_table=11 NSLS01000039.1 Genbank pseudogene 12238 13179 . - . ID=gene-CLI77_09240;Name=CLI77_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09240;pseudo=true NSLS01000039.1 Protein Homology CDS 12238 13179 . - 0 ID=cds-CLI77_09240;Parent=gene-CLI77_09240;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224130.1;locus_tag=CLI77_09240;product=mobilization protein;pseudo=true;transl_table=11 NSLS01000039.1 Genbank gene 13169 13531 . - . ID=gene-CLI77_09245;Name=CLI77_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09245 NSLS01000039.1 Protein Homology CDS 13169 13531 . - 0 ID=cds-PDP48378.1;Parent=gene-CLI77_09245;Dbxref=NCBI_GP:PDP48378.1;Name=PDP48378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457884.1;locus_tag=CLI77_09245;product=plasmid mobilization relaxosome protein MobC;protein_id=PDP48378.1;transl_table=11 NSLS01000039.1 Genbank gene 13661 14548 . - . ID=gene-CLI77_09250;Name=CLI77_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09250 NSLS01000039.1 Protein Homology CDS 13661 14548 . - 0 ID=cds-PDP48379.1;Parent=gene-CLI77_09250;Dbxref=NCBI_GP:PDP48379.1;Name=PDP48379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224127.1;locus_tag=CLI77_09250;product=DNA primase;protein_id=PDP48379.1;transl_table=11 NSLS01000039.1 Genbank pseudogene 14779 15237 . - . ID=gene-CLI77_09255;Name=CLI77_09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09255;pseudo=true NSLS01000039.1 Protein Homology CDS 14779 15237 . - 0 ID=cds-CLI77_09255;Parent=gene-CLI77_09255;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368397.1;locus_tag=CLI77_09255;product=virulence protein;pseudo=true;transl_table=11 NSLS01000039.1 Genbank gene 15230 15373 . - . ID=gene-CLI77_09260;Name=CLI77_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09260 NSLS01000039.1 Protein Homology CDS 15230 15373 . - 0 ID=cds-PDP48380.1;Parent=gene-CLI77_09260;Dbxref=NCBI_GP:PDP48380.1;Name=PDP48380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874956.1;locus_tag=CLI77_09260;product=DNA methylase;protein_id=PDP48380.1;transl_table=11 NSLS01000039.1 Genbank gene 15387 16472 . - . ID=gene-CLI77_09265;Name=CLI77_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09265 NSLS01000039.1 Protein Homology CDS 15387 16472 . - 0 ID=cds-PDP48381.1;Parent=gene-CLI77_09265;Dbxref=NCBI_GP:PDP48381.1;Name=PDP48381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_09265;product=IS5/IS1182 family transposase;protein_id=PDP48381.1;transl_table=11 ##sequence-region NSLS01000003.1 1 86036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000003.1 Genbank region 1 86036 . + . ID=NSLS01000003.1:1..86036;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000003.1 Genbank gene 1 310 . + . ID=gene-CLI77_01740;Name=CLI77_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01740;partial=true;start_range=.,1 NSLS01000003.1 Protein Homology CDS 1 310 . + 1 ID=cds-PDP50179.1;Parent=gene-CLI77_01740;Dbxref=NCBI_GP:PDP50179.1;Name=PDP50179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_01740;partial=true;product=IS982 family transposase;protein_id=PDP50179.1;start_range=.,1;transl_table=11 NSLS01000003.1 Genbank pseudogene 325 831 . + . ID=gene-CLI77_01745;Name=CLI77_01745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01745;pseudo=true NSLS01000003.1 Protein Homology CDS 325 831 . + 0 ID=cds-CLI77_01745;Parent=gene-CLI77_01745;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_01745;product=IS3 family transposase;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 961 1191 . + . ID=gene-CLI77_01750;Name=CLI77_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01750 NSLS01000003.1 Protein Homology CDS 961 1191 . + 0 ID=cds-PDP50180.1;Parent=gene-CLI77_01750;Dbxref=NCBI_GP:PDP50180.1;Name=PDP50180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874236.1;locus_tag=CLI77_01750;product=hypothetical protein;protein_id=PDP50180.1;transl_table=11 NSLS01000003.1 Genbank gene 1138 3441 . - . ID=gene-CLI77_01755;Name=CLI77_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01755 NSLS01000003.1 Protein Homology CDS 1138 3441 . - 0 ID=cds-PDP50181.1;Parent=gene-CLI77_01755;Dbxref=NCBI_GP:PDP50181.1;Name=PDP50181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457487.1;locus_tag=CLI77_01755;product=alpha-mannosidase;protein_id=PDP50181.1;transl_table=11 NSLS01000003.1 Genbank gene 3466 5811 . - . ID=gene-CLI77_01760;Name=CLI77_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01760 NSLS01000003.1 Protein Homology CDS 3466 5811 . - 0 ID=cds-PDP50182.1;Parent=gene-CLI77_01760;Dbxref=NCBI_GP:PDP50182.1;Name=PDP50182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457486.1;locus_tag=CLI77_01760;product=alpha-mannosidase;protein_id=PDP50182.1;transl_table=11 NSLS01000003.1 Genbank gene 5901 6305 . - . ID=gene-CLI77_01765;Name=CLI77_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01765 NSLS01000003.1 Protein Homology CDS 5901 6305 . - 0 ID=cds-PDP50183.1;Parent=gene-CLI77_01765;Dbxref=NCBI_GP:PDP50183.1;Name=PDP50183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956378.1;locus_tag=CLI77_01765;product=rhodanese-like domain-containing protein;protein_id=PDP50183.1;transl_table=11 NSLS01000003.1 Genbank gene 6342 6986 . - . ID=gene-CLI77_01770;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CLI77_01770 NSLS01000003.1 Protein Homology CDS 6342 6986 . - 0 ID=cds-PDP50184.1;Parent=gene-CLI77_01770;Dbxref=NCBI_GP:PDP50184.1;Name=PDP50184.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013760864.1;locus_tag=CLI77_01770;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=PDP50184.1;transl_table=11 NSLS01000003.1 Genbank pseudogene 7297 7494 . + . ID=gene-CLI77_01775;Name=CLI77_01775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01775;pseudo=true NSLS01000003.1 Protein Homology CDS 7297 7494 . + 0 ID=cds-CLI77_01775;Parent=gene-CLI77_01775;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI77_01775;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank pseudogene 7481 7675 . + . ID=gene-CLI77_01780;Name=CLI77_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01780;pseudo=true NSLS01000003.1 Protein Homology CDS 7481 7675 . + 0 ID=cds-CLI77_01780;Parent=gene-CLI77_01780;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816478.1;locus_tag=CLI77_01780;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 7977 10757 . - . ID=gene-CLI77_01785;Name=CLI77_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01785 NSLS01000003.1 Protein Homology CDS 7977 10757 . - 0 ID=cds-PDP50185.1;Parent=gene-CLI77_01785;Dbxref=NCBI_GP:PDP50185.1;Name=PDP50185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457482.1;locus_tag=CLI77_01785;product=hypothetical protein;protein_id=PDP50185.1;transl_table=11 NSLS01000003.1 Genbank pseudogene 11119 11390 . - . ID=gene-CLI77_01790;Name=CLI77_01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01790;pseudo=true NSLS01000003.1 Protein Homology CDS 11119 11390 . - 0 ID=cds-CLI77_01790;Parent=gene-CLI77_01790;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956380.1;locus_tag=CLI77_01790;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 11382 13232 . + . ID=gene-CLI77_01795;Name=CLI77_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01795 NSLS01000003.1 Protein Homology CDS 11382 13232 . + 0 ID=cds-PDP50186.1;Parent=gene-CLI77_01795;Dbxref=NCBI_GP:PDP50186.1;Name=PDP50186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964824.1;locus_tag=CLI77_01795;product=antibiotic ABC transporter ATP-binding protein;protein_id=PDP50186.1;transl_table=11 NSLS01000003.1 Genbank gene 13266 14777 . + . ID=gene-CLI77_01800;Name=CLI77_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01800 NSLS01000003.1 Protein Homology CDS 13266 14777 . + 0 ID=cds-PDP50187.1;Parent=gene-CLI77_01800;Dbxref=NCBI_GP:PDP50187.1;Name=PDP50187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874476.1;locus_tag=CLI77_01800;product=hypothetical protein;protein_id=PDP50187.1;transl_table=11 NSLS01000003.1 Genbank gene 14830 17025 . + . ID=gene-CLI77_01805;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CLI77_01805 NSLS01000003.1 Protein Homology CDS 14830 17025 . + 0 ID=cds-PDP50188.1;Parent=gene-CLI77_01805;Dbxref=NCBI_GP:PDP50188.1;Name=PDP50188.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583941.1;locus_tag=CLI77_01805;product=ribonuclease R;protein_id=PDP50188.1;transl_table=11 NSLS01000003.1 Genbank gene 17216 17521 . - . ID=gene-CLI77_01810;Name=CLI77_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01810 NSLS01000003.1 Protein Homology CDS 17216 17521 . - 0 ID=cds-PDP50189.1;Parent=gene-CLI77_01810;Dbxref=NCBI_GP:PDP50189.1;Name=PDP50189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583940.1;locus_tag=CLI77_01810;product=hypothetical protein;protein_id=PDP50189.1;transl_table=11 NSLS01000003.1 Genbank gene 17601 17672 . + . ID=gene-CLI77_01815;Name=CLI77_01815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01815 NSLS01000003.1 tRNAscan-SE tRNA 17601 17672 . + . ID=rna-CLI77_01815;Parent=gene-CLI77_01815;anticodon=(pos:17634..17636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01815;product=tRNA-Glu NSLS01000003.1 tRNAscan-SE exon 17601 17672 . + . ID=exon-CLI77_01815-1;Parent=rna-CLI77_01815;anticodon=(pos:17634..17636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01815;product=tRNA-Glu NSLS01000003.1 Genbank gene 17702 17956 . + . ID=gene-CLI77_01820;Name=CLI77_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01820 NSLS01000003.1 Protein Homology CDS 17702 17956 . + 0 ID=cds-PDP50190.1;Parent=gene-CLI77_01820;Dbxref=NCBI_GP:PDP50190.1;Name=PDP50190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874497.1;locus_tag=CLI77_01820;product=30S ribosomal protein S20;protein_id=PDP50190.1;transl_table=11 NSLS01000003.1 Genbank gene 18021 18092 . + . ID=gene-CLI77_01825;Name=CLI77_01825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_01825 NSLS01000003.1 tRNAscan-SE tRNA 18021 18092 . + . ID=rna-CLI77_01825;Parent=gene-CLI77_01825;anticodon=(pos:18054..18056);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01825;product=tRNA-Glu NSLS01000003.1 tRNAscan-SE exon 18021 18092 . + . ID=exon-CLI77_01825-1;Parent=rna-CLI77_01825;anticodon=(pos:18054..18056);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_01825;product=tRNA-Glu NSLS01000003.1 Genbank gene 18373 19398 . + . ID=gene-CLI77_01830;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CLI77_01830 NSLS01000003.1 Protein Homology CDS 18373 19398 . + 0 ID=cds-PDP50191.1;Parent=gene-CLI77_01830;Dbxref=NCBI_GP:PDP50191.1;Name=PDP50191.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583938.1;locus_tag=CLI77_01830;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=PDP50191.1;transl_table=11 NSLS01000003.1 Genbank gene 19398 19880 . + . ID=gene-CLI77_01835;Name=CLI77_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01835 NSLS01000003.1 Protein Homology CDS 19398 19880 . + 0 ID=cds-PDP50192.1;Parent=gene-CLI77_01835;Dbxref=NCBI_GP:PDP50192.1;Name=PDP50192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457475.1;locus_tag=CLI77_01835;product=CinA family protein;protein_id=PDP50192.1;transl_table=11 NSLS01000003.1 Genbank gene 19913 21331 . + . ID=gene-CLI77_01840;Name=CLI77_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01840 NSLS01000003.1 Protein Homology CDS 19913 21331 . + 0 ID=cds-PDP50193.1;Parent=gene-CLI77_01840;Dbxref=NCBI_GP:PDP50193.1;Name=PDP50193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815509.1;locus_tag=CLI77_01840;product=signal protein PDZ;protein_id=PDP50193.1;transl_table=11 NSLS01000003.1 Genbank gene 21341 22204 . + . ID=gene-CLI77_01845;Name=CLI77_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01845 NSLS01000003.1 Protein Homology CDS 21341 22204 . + 0 ID=cds-PDP50194.1;Parent=gene-CLI77_01845;Dbxref=NCBI_GP:PDP50194.1;Name=PDP50194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815508.1;locus_tag=CLI77_01845;product=hypothetical protein;protein_id=PDP50194.1;transl_table=11 NSLS01000003.1 Genbank gene 22237 22728 . + . ID=gene-CLI77_01850;Name=CLI77_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01850 NSLS01000003.1 Protein Homology CDS 22237 22728 . + 0 ID=cds-PDP50195.1;Parent=gene-CLI77_01850;Dbxref=NCBI_GP:PDP50195.1;Name=PDP50195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583934.1;locus_tag=CLI77_01850;product=nucleoside deaminase;protein_id=PDP50195.1;transl_table=11 NSLS01000003.1 Genbank gene 22924 23427 . - . ID=gene-CLI77_01855;Name=CLI77_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01855 NSLS01000003.1 Protein Homology CDS 22924 23427 . - 0 ID=cds-PDP50196.1;Parent=gene-CLI77_01855;Dbxref=NCBI_GP:PDP50196.1;Name=PDP50196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964814.1;locus_tag=CLI77_01855;product=lipid hydroperoxide peroxidase;protein_id=PDP50196.1;transl_table=11 NSLS01000003.1 Genbank gene 23509 24159 . - . ID=gene-CLI77_01860;Name=CLI77_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01860 NSLS01000003.1 Protein Homology CDS 23509 24159 . - 0 ID=cds-PDP50197.1;Parent=gene-CLI77_01860;Dbxref=NCBI_GP:PDP50197.1;Name=PDP50197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874474.1;locus_tag=CLI77_01860;product=O-methyltransferase;protein_id=PDP50197.1;transl_table=11 NSLS01000003.1 Genbank gene 24260 24685 . - . ID=gene-CLI77_01865;Name=CLI77_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01865 NSLS01000003.1 Protein Homology CDS 24260 24685 . - 0 ID=cds-PDP50198.1;Parent=gene-CLI77_01865;Dbxref=NCBI_GP:PDP50198.1;Name=PDP50198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583931.1;locus_tag=CLI77_01865;product=3-dehydroquinate dehydratase;protein_id=PDP50198.1;transl_table=11 NSLS01000003.1 Genbank gene 24803 25729 . + . ID=gene-CLI77_01870;Name=CLI77_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01870 NSLS01000003.1 Protein Homology CDS 24803 25729 . + 0 ID=cds-PDP50199.1;Parent=gene-CLI77_01870;Dbxref=NCBI_GP:PDP50199.1;Name=PDP50199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964809.1;locus_tag=CLI77_01870;product=tyrosine recombinase XerD;protein_id=PDP50199.1;transl_table=11 NSLS01000003.1 Genbank gene 25769 26206 . - . ID=gene-CLI77_01875;Name=CLI77_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01875 NSLS01000003.1 Protein Homology CDS 25769 26206 . - 0 ID=cds-PDP50200.1;Parent=gene-CLI77_01875;Dbxref=NCBI_GP:PDP50200.1;Name=PDP50200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583929.1;locus_tag=CLI77_01875;product=DUF695 domain-containing protein;protein_id=PDP50200.1;transl_table=11 NSLS01000003.1 Genbank gene 26203 27114 . - . ID=gene-CLI77_01880;Name=CLI77_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01880 NSLS01000003.1 Protein Homology CDS 26203 27114 . - 0 ID=cds-PDP50201.1;Parent=gene-CLI77_01880;Dbxref=NCBI_GP:PDP50201.1;Name=PDP50201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815502.1;locus_tag=CLI77_01880;product=transporter;protein_id=PDP50201.1;transl_table=11 NSLS01000003.1 Genbank gene 27111 27665 . - . ID=gene-CLI77_01885;Name=CLI77_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01885 NSLS01000003.1 Protein Homology CDS 27111 27665 . - 0 ID=cds-PDP50202.1;Parent=gene-CLI77_01885;Dbxref=NCBI_GP:PDP50202.1;Name=PDP50202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956388.1;locus_tag=CLI77_01885;product=NUDIX domain-containing protein;protein_id=PDP50202.1;transl_table=11 NSLS01000003.1 Genbank gene 27650 28609 . - . ID=gene-CLI77_01890;Name=CLI77_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01890 NSLS01000003.1 Protein Homology CDS 27650 28609 . - 0 ID=cds-PDP50203.1;Parent=gene-CLI77_01890;Dbxref=NCBI_GP:PDP50203.1;Name=PDP50203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798199.1;locus_tag=CLI77_01890;product=glucokinase;protein_id=PDP50203.1;transl_table=11 NSLS01000003.1 Genbank gene 28680 29714 . - . ID=gene-CLI77_01895;Name=CLI77_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01895 NSLS01000003.1 Protein Homology CDS 28680 29714 . - 0 ID=cds-PDP50204.1;Parent=gene-CLI77_01895;Dbxref=NCBI_GP:PDP50204.1;Name=PDP50204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956389.1;locus_tag=CLI77_01895;product=hypothetical protein;protein_id=PDP50204.1;transl_table=11 NSLS01000003.1 Genbank gene 29711 30619 . - . ID=gene-CLI77_01900;Name=CLI77_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01900 NSLS01000003.1 Protein Homology CDS 29711 30619 . - 0 ID=cds-PDP50205.1;Parent=gene-CLI77_01900;Dbxref=NCBI_GP:PDP50205.1;Name=PDP50205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583924.1;locus_tag=CLI77_01900;product=exopolyphosphatase;protein_id=PDP50205.1;transl_table=11 NSLS01000003.1 Genbank gene 30767 32194 . - . ID=gene-CLI77_01905;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CLI77_01905 NSLS01000003.1 Protein Homology CDS 30767 32194 . - 0 ID=cds-PDP50206.1;Parent=gene-CLI77_01905;Dbxref=NCBI_GP:PDP50206.1;Name=PDP50206.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583923.1;locus_tag=CLI77_01905;product=aspartate ammonia-lyase;protein_id=PDP50206.1;transl_table=11 NSLS01000003.1 Genbank gene 32440 33258 . - . ID=gene-CLI77_01910;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CLI77_01910 NSLS01000003.1 Protein Homology CDS 32440 33258 . - 0 ID=cds-PDP50207.1;Parent=gene-CLI77_01910;Dbxref=NCBI_GP:PDP50207.1;Name=PDP50207.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815498.1;locus_tag=CLI77_01910;product=3-deoxy-8-phosphooctulonate synthase;protein_id=PDP50207.1;transl_table=11 NSLS01000003.1 Genbank gene 34500 36164 . - . ID=gene-CLI77_01915;Name=CLI77_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01915 NSLS01000003.1 Protein Homology CDS 34500 36164 . - 0 ID=cds-PDP50208.1;Parent=gene-CLI77_01915;Dbxref=NCBI_GP:PDP50208.1;Name=PDP50208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583920.1;locus_tag=CLI77_01915;product=AAA family ATPase;protein_id=PDP50208.1;transl_table=11 NSLS01000003.1 Genbank gene 36255 37382 . + . ID=gene-CLI77_01920;Name=CLI77_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01920 NSLS01000003.1 Protein Homology CDS 36255 37382 . + 0 ID=cds-PDP50209.1;Parent=gene-CLI77_01920;Dbxref=NCBI_GP:PDP50209.1;Name=PDP50209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432990.1;locus_tag=CLI77_01920;product=hypothetical protein;protein_id=PDP50209.1;transl_table=11 NSLS01000003.1 Genbank gene 37520 38029 . + . ID=gene-CLI77_01925;Name=CLI77_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01925 NSLS01000003.1 Protein Homology CDS 37520 38029 . + 0 ID=cds-PDP50210.1;Parent=gene-CLI77_01925;Dbxref=NCBI_GP:PDP50210.1;Name=PDP50210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874471.1;locus_tag=CLI77_01925;product=thiol reductase thioredoxin;protein_id=PDP50210.1;transl_table=11 NSLS01000003.1 Genbank pseudogene 38233 38603 . - . ID=gene-CLI77_01930;Name=CLI77_01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01930;pseudo=true NSLS01000003.1 Protein Homology CDS 38233 38603 . - 0 ID=cds-CLI77_01930;Parent=gene-CLI77_01930;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955967.1;locus_tag=CLI77_01930;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 38645 39241 . - . ID=gene-CLI77_01935;Name=CLI77_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01935 NSLS01000003.1 Protein Homology CDS 38645 39241 . - 0 ID=cds-PDP50211.1;Parent=gene-CLI77_01935;Dbxref=NCBI_GP:PDP50211.1;Name=PDP50211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815493.1;locus_tag=CLI77_01935;product=4'-phosphopantetheinyl transferase;protein_id=PDP50211.1;transl_table=11 NSLS01000003.1 Genbank gene 39277 40605 . - . ID=gene-CLI77_01940;Name=CLI77_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01940 NSLS01000003.1 Protein Homology CDS 39277 40605 . - 0 ID=cds-PDP50212.1;Parent=gene-CLI77_01940;Dbxref=NCBI_GP:PDP50212.1;Name=PDP50212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583916.1;locus_tag=CLI77_01940;product=gliding motility-associated protein GldE;protein_id=PDP50212.1;transl_table=11 NSLS01000003.1 Genbank gene 40623 41093 . - . ID=gene-CLI77_01945;Name=CLI77_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01945 NSLS01000003.1 Protein Homology CDS 40623 41093 . - 0 ID=cds-PDP50213.1;Parent=gene-CLI77_01945;Dbxref=NCBI_GP:PDP50213.1;Name=PDP50213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964806.1;locus_tag=CLI77_01945;product=single-stranded DNA-binding protein;protein_id=PDP50213.1;transl_table=11 NSLS01000003.1 Genbank gene 41144 42070 . - . ID=gene-CLI77_01950;Name=CLI77_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01950 NSLS01000003.1 Protein Homology CDS 41144 42070 . - 0 ID=cds-PDP50214.1;Parent=gene-CLI77_01950;Dbxref=NCBI_GP:PDP50214.1;Name=PDP50214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964805.1;locus_tag=CLI77_01950;product=hydrogen peroxide-inducible genes activator;protein_id=PDP50214.1;transl_table=11 NSLS01000003.1 Genbank gene 42143 42907 . - . ID=gene-CLI77_01955;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=CLI77_01955 NSLS01000003.1 Protein Homology CDS 42143 42907 . - 0 ID=cds-PDP50215.1;Parent=gene-CLI77_01955;Dbxref=NCBI_GP:PDP50215.1;Name=PDP50215.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874493.1;locus_tag=CLI77_01955;product=exodeoxyribonuclease III;protein_id=PDP50215.1;transl_table=11 NSLS01000003.1 Genbank gene 42952 44037 . - . ID=gene-CLI77_01960;Name=CLI77_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01960 NSLS01000003.1 Protein Homology CDS 42952 44037 . - 0 ID=cds-PDP50216.1;Parent=gene-CLI77_01960;Dbxref=NCBI_GP:PDP50216.1;Name=PDP50216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457454.1;locus_tag=CLI77_01960;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=PDP50216.1;transl_table=11 NSLS01000003.1 Genbank gene 44042 45835 . - . ID=gene-CLI77_01965;Name=CLI77_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01965 NSLS01000003.1 Protein Homology CDS 44042 45835 . - 0 ID=cds-PDP50217.1;Parent=gene-CLI77_01965;Dbxref=NCBI_GP:PDP50217.1;Name=PDP50217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964802.1;locus_tag=CLI77_01965;product=arginine--tRNA ligase;protein_id=PDP50217.1;transl_table=11 NSLS01000003.1 Genbank pseudogene 46457 46660 . + . ID=gene-CLI77_01970;Name=CLI77_01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_01970;pseudo=true NSLS01000003.1 Protein Homology CDS 46457 46660 . + 0 ID=cds-CLI77_01970;Parent=gene-CLI77_01970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816302.1;locus_tag=CLI77_01970;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 47007 48074 . - . ID=gene-CLI77_01975;Name=CLI77_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01975 NSLS01000003.1 Protein Homology CDS 47007 48074 . - 0 ID=cds-PDP50218.1;Parent=gene-CLI77_01975;Dbxref=NCBI_GP:PDP50218.1;Name=PDP50218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815486.1;locus_tag=CLI77_01975;product=glycosyltransferase family 2 protein;protein_id=PDP50218.1;transl_table=11 NSLS01000003.1 Genbank gene 48094 49386 . - . ID=gene-CLI77_01980;Name=CLI77_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01980 NSLS01000003.1 Protein Homology CDS 48094 49386 . - 0 ID=cds-PDP50219.1;Parent=gene-CLI77_01980;Dbxref=NCBI_GP:PDP50219.1;Name=PDP50219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008778966.1;locus_tag=CLI77_01980;product=tyrosine--tRNA ligase;protein_id=PDP50219.1;transl_table=11 NSLS01000003.1 Genbank gene 50328 51671 . - . ID=gene-CLI77_01985;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CLI77_01985 NSLS01000003.1 Protein Homology CDS 50328 51671 . - 0 ID=cds-PDP50220.1;Parent=gene-CLI77_01985;Dbxref=NCBI_GP:PDP50220.1;Name=PDP50220.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964799.1;locus_tag=CLI77_01985;product=Fe-S cluster assembly protein SufD;protein_id=PDP50220.1;transl_table=11 NSLS01000003.1 Genbank gene 51678 52430 . - . ID=gene-CLI77_01990;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CLI77_01990 NSLS01000003.1 Protein Homology CDS 51678 52430 . - 0 ID=cds-PDP50221.1;Parent=gene-CLI77_01990;Dbxref=NCBI_GP:PDP50221.1;Name=PDP50221.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812319.1;locus_tag=CLI77_01990;product=Fe-S cluster assembly ATPase SufC;protein_id=PDP50221.1;transl_table=11 NSLS01000003.1 Genbank gene 52470 53921 . - . ID=gene-CLI77_01995;Name=CLI77_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_01995 NSLS01000003.1 Protein Homology CDS 52470 53921 . - 0 ID=cds-PDP50222.1;Parent=gene-CLI77_01995;Dbxref=NCBI_GP:PDP50222.1;Name=PDP50222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005468047.1;locus_tag=CLI77_01995;product=Fe-S cluster assembly protein SufB;protein_id=PDP50222.1;transl_table=11 NSLS01000003.1 Genbank gene 53955 54446 . - . ID=gene-CLI77_02000;Name=CLI77_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02000 NSLS01000003.1 Protein Homology CDS 53955 54446 . - 0 ID=cds-PDP50223.1;Parent=gene-CLI77_02000;Dbxref=NCBI_GP:PDP50223.1;Name=PDP50223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964797.1;locus_tag=CLI77_02000;product=colicin V production CvpA;protein_id=PDP50223.1;transl_table=11 NSLS01000003.1 Genbank gene 54474 57413 . - . ID=gene-CLI77_02005;Name=CLI77_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02005 NSLS01000003.1 Protein Homology CDS 54474 57413 . - 0 ID=cds-PDP50224.1;Parent=gene-CLI77_02005;Dbxref=NCBI_GP:PDP50224.1;Name=PDP50224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457447.1;locus_tag=CLI77_02005;product=translation initiation factor IF-2;protein_id=PDP50224.1;transl_table=11 NSLS01000003.1 Genbank gene 57509 58843 . - . ID=gene-CLI77_02010;Name=CLI77_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02010 NSLS01000003.1 Protein Homology CDS 57509 58843 . - 0 ID=cds-PDP50225.1;Parent=gene-CLI77_02010;Dbxref=NCBI_GP:PDP50225.1;Name=PDP50225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583902.1;locus_tag=CLI77_02010;product=transcription termination/antitermination protein NusA;protein_id=PDP50225.1;transl_table=11 NSLS01000003.1 Genbank gene 58890 59348 . - . ID=gene-CLI77_02015;Name=CLI77_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02015 NSLS01000003.1 Protein Homology CDS 58890 59348 . - 0 ID=cds-PDP50226.1;Parent=gene-CLI77_02015;Dbxref=NCBI_GP:PDP50226.1;Name=PDP50226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874179.1;locus_tag=CLI77_02015;product=ribosome assembly cofactor RimP;protein_id=PDP50226.1;transl_table=11 NSLS01000003.1 Genbank gene 60214 62073 . + . ID=gene-CLI77_02020;Name=CLI77_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02020 NSLS01000003.1 Protein Homology CDS 60214 62073 . + 0 ID=cds-PDP50227.1;Parent=gene-CLI77_02020;Dbxref=NCBI_GP:PDP50227.1;Name=PDP50227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815474.1;locus_tag=CLI77_02020;product=oxaloacetate decarboxylase;protein_id=PDP50227.1;transl_table=11 NSLS01000003.1 Genbank gene 62170 62502 . + . ID=gene-CLI77_02025;Name=CLI77_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02025 NSLS01000003.1 Protein Homology CDS 62170 62502 . + 0 ID=cds-PDP50228.1;Parent=gene-CLI77_02025;Dbxref=NCBI_GP:PDP50228.1;Name=PDP50228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966051.1;locus_tag=CLI77_02025;product=translation initiation factor;protein_id=PDP50228.1;transl_table=11 NSLS01000003.1 Genbank gene 62708 62962 . + . ID=gene-CLI77_02030;Name=CLI77_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02030 NSLS01000003.1 Protein Homology CDS 62708 62962 . + 0 ID=cds-PDP50229.1;Parent=gene-CLI77_02030;Dbxref=NCBI_GP:PDP50229.1;Name=PDP50229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583895.1;locus_tag=CLI77_02030;product=DNA-binding protein;protein_id=PDP50229.1;transl_table=11 NSLS01000003.1 Genbank gene 63127 64239 . + . ID=gene-CLI77_02035;Name=CLI77_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02035 NSLS01000003.1 Protein Homology CDS 63127 64239 . + 0 ID=cds-PDP50230.1;Parent=gene-CLI77_02035;Dbxref=NCBI_GP:PDP50230.1;Name=PDP50230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966050.1;locus_tag=CLI77_02035;product=universal stress protein;protein_id=PDP50230.1;transl_table=11 NSLS01000003.1 Genbank gene 64558 65034 . + . ID=gene-CLI77_02040;Name=CLI77_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02040 NSLS01000003.1 Protein Homology CDS 64558 65034 . + 0 ID=cds-PDP50231.1;Parent=gene-CLI77_02040;Dbxref=NCBI_GP:PDP50231.1;Name=PDP50231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583892.1;locus_tag=CLI77_02040;product=hypothetical protein;protein_id=PDP50231.1;transl_table=11 NSLS01000003.1 Genbank gene 65050 65751 . + . ID=gene-CLI77_02045;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CLI77_02045 NSLS01000003.1 Protein Homology CDS 65050 65751 . + 0 ID=cds-PDP50232.1;Parent=gene-CLI77_02045;Dbxref=NCBI_GP:PDP50232.1;Name=PDP50232.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874163.1;locus_tag=CLI77_02045;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=PDP50232.1;transl_table=11 NSLS01000003.1 Genbank gene 65796 66650 . + . ID=gene-CLI77_02050;Name=CLI77_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02050 NSLS01000003.1 Protein Homology CDS 65796 66650 . + 0 ID=cds-PDP50233.1;Parent=gene-CLI77_02050;Dbxref=NCBI_GP:PDP50233.1;Name=PDP50233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966047.1;locus_tag=CLI77_02050;product=hypothetical protein;protein_id=PDP50233.1;transl_table=11 NSLS01000003.1 Genbank gene 66800 67615 . + . ID=gene-CLI77_02055;Name=CLI77_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02055 NSLS01000003.1 Protein Homology CDS 66800 67615 . + 0 ID=cds-PDP50234.1;Parent=gene-CLI77_02055;Dbxref=NCBI_GP:PDP50234.1;Name=PDP50234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815472.1;locus_tag=CLI77_02055;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=PDP50234.1;transl_table=11 NSLS01000003.1 Genbank gene 68555 69223 . - . ID=gene-CLI77_02060;Name=CLI77_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02060 NSLS01000003.1 Protein Homology CDS 68555 69223 . - 0 ID=cds-PDP50235.1;Parent=gene-CLI77_02060;Dbxref=NCBI_GP:PDP50235.1;Name=PDP50235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457441.1;locus_tag=CLI77_02060;product=uracil-DNA glycosylase;protein_id=PDP50235.1;transl_table=11 NSLS01000003.1 Genbank gene 69257 70777 . - . ID=gene-CLI77_02065;Name=CLI77_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02065 NSLS01000003.1 Protein Homology CDS 69257 70777 . - 0 ID=cds-PDP50236.1;Parent=gene-CLI77_02065;Dbxref=NCBI_GP:PDP50236.1;Name=PDP50236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457440.1;locus_tag=CLI77_02065;product=hypothetical protein;protein_id=PDP50236.1;transl_table=11 NSLS01000003.1 Genbank gene 70849 72450 . - . ID=gene-CLI77_02070;Name=CLI77_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02070 NSLS01000003.1 Protein Homology CDS 70849 72450 . - 0 ID=cds-PDP50237.1;Parent=gene-CLI77_02070;Dbxref=NCBI_GP:PDP50237.1;Name=PDP50237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874888.1;locus_tag=CLI77_02070;product=peptidase S41;protein_id=PDP50237.1;transl_table=11 NSLS01000003.1 Genbank gene 72667 73290 . + . ID=gene-CLI77_02075;Name=CLI77_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02075 NSLS01000003.1 Protein Homology CDS 72667 73290 . + 0 ID=cds-PDP50238.1;Parent=gene-CLI77_02075;Dbxref=NCBI_GP:PDP50238.1;Name=PDP50238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583881.1;locus_tag=CLI77_02075;product=hypothetical protein;protein_id=PDP50238.1;transl_table=11 NSLS01000003.1 Genbank pseudogene 73749 74084 . - . ID=gene-CLI77_02080;Name=CLI77_02080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02080;pseudo=true NSLS01000003.1 Protein Homology CDS 73749 74084 . - 0 ID=cds-CLI77_02080;Parent=gene-CLI77_02080;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458255.1;locus_tag=CLI77_02080;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000003.1 Genbank gene 74315 76780 . + . ID=gene-CLI77_02085;Name=CLI77_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02085 NSLS01000003.1 Protein Homology CDS 74315 76780 . + 0 ID=cds-PDP50239.1;Parent=gene-CLI77_02085;Dbxref=NCBI_GP:PDP50239.1;Name=PDP50239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873522.1;locus_tag=CLI77_02085;product=zinc carboxypeptidase;protein_id=PDP50239.1;transl_table=11 NSLS01000003.1 Genbank gene 76859 78157 . - . ID=gene-CLI77_02090;Name=CLI77_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02090 NSLS01000003.1 Protein Homology CDS 76859 78157 . - 0 ID=cds-PDP50240.1;Parent=gene-CLI77_02090;Dbxref=NCBI_GP:PDP50240.1;Name=PDP50240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457435.1;locus_tag=CLI77_02090;product=DUF1343 domain-containing protein;protein_id=PDP50240.1;transl_table=11 NSLS01000003.1 Genbank gene 78154 78816 . - . ID=gene-CLI77_02095;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CLI77_02095 NSLS01000003.1 Protein Homology CDS 78154 78816 . - 0 ID=cds-PDP50241.1;Parent=gene-CLI77_02095;Dbxref=NCBI_GP:PDP50241.1;Name=PDP50241.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965075.1;locus_tag=CLI77_02095;product=transaldolase;protein_id=PDP50241.1;transl_table=11 NSLS01000003.1 Genbank gene 78919 79317 . - . ID=gene-CLI77_02100;Name=CLI77_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02100 NSLS01000003.1 Protein Homology CDS 78919 79317 . - 0 ID=cds-PDP50248.1;Parent=gene-CLI77_02100;Dbxref=NCBI_GP:PDP50248.1;Name=PDP50248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873523.1;locus_tag=CLI77_02100;product=hypothetical protein;protein_id=PDP50248.1;transl_table=11 NSLS01000003.1 Genbank gene 79289 80215 . + . ID=gene-CLI77_02105;Name=CLI77_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02105 NSLS01000003.1 Protein Homology CDS 79289 80215 . + 0 ID=cds-PDP50242.1;Parent=gene-CLI77_02105;Dbxref=NCBI_GP:PDP50242.1;Name=PDP50242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815460.1;locus_tag=CLI77_02105;product=amidinotransferase;protein_id=PDP50242.1;transl_table=11 NSLS01000003.1 Genbank gene 80261 81646 . + . ID=gene-CLI77_02110;Name=CLI77_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02110 NSLS01000003.1 Protein Homology CDS 80261 81646 . + 0 ID=cds-PDP50243.1;Parent=gene-CLI77_02110;Dbxref=NCBI_GP:PDP50243.1;Name=PDP50243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457433.1;locus_tag=CLI77_02110;product=DNA repair protein RadA;protein_id=PDP50243.1;transl_table=11 NSLS01000003.1 Genbank gene 81708 84401 . + . ID=gene-CLI77_02115;Name=CLI77_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02115 NSLS01000003.1 Protein Homology CDS 81708 84401 . + 0 ID=cds-PDP50244.1;Parent=gene-CLI77_02115;Dbxref=NCBI_GP:PDP50244.1;Name=PDP50244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583871.1;locus_tag=CLI77_02115;product=transglutaminase;protein_id=PDP50244.1;transl_table=11 NSLS01000003.1 Genbank gene 84583 85221 . + . ID=gene-CLI77_02120;Name=CLI77_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02120 NSLS01000003.1 Protein Homology CDS 84583 85221 . + 0 ID=cds-PDP50245.1;Parent=gene-CLI77_02120;Dbxref=NCBI_GP:PDP50245.1;Name=PDP50245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965079.1;locus_tag=CLI77_02120;product=MarC family protein;protein_id=PDP50245.1;transl_table=11 NSLS01000003.1 Genbank gene 85225 85716 . + . ID=gene-CLI77_02125;Name=CLI77_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02125 NSLS01000003.1 Protein Homology CDS 85225 85716 . + 0 ID=cds-PDP50246.1;Parent=gene-CLI77_02125;Dbxref=NCBI_GP:PDP50246.1;Name=PDP50246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874253.1;locus_tag=CLI77_02125;product=DNA polymerase III subunit epsilon;protein_id=PDP50246.1;transl_table=11 NSLS01000003.1 Genbank gene 85722 85988 . + . ID=gene-CLI77_02130;Name=CLI77_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02130 NSLS01000003.1 Protein Homology CDS 85722 85988 . + 0 ID=cds-PDP50247.1;Parent=gene-CLI77_02130;Dbxref=NCBI_GP:PDP50247.1;Name=PDP50247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874264.1;locus_tag=CLI77_02130;product=hypothetical protein;protein_id=PDP50247.1;transl_table=11 ##sequence-region NSLS01000040.1 1 16061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000040.1 Genbank region 1 16061 . + . ID=NSLS01000040.1:1..16061;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000040.1 Genbank gene 1 628 . + . ID=gene-CLI77_09270;Name=CLI77_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09270;partial=true;start_range=.,1 NSLS01000040.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48346.1;Parent=gene-CLI77_09270;Dbxref=NCBI_GP:PDP48346.1;Name=PDP48346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_09270;partial=true;product=IS3 family transposase;protein_id=PDP48346.1;start_range=.,1;transl_table=11 NSLS01000040.1 Genbank gene 1335 1982 . - . ID=gene-CLI77_09275;Name=CLI77_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09275 NSLS01000040.1 Protein Homology CDS 1335 1982 . - 0 ID=cds-PDP48347.1;Parent=gene-CLI77_09275;Dbxref=NCBI_GP:PDP48347.1;Name=PDP48347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584663.1;locus_tag=CLI77_09275;product=hypothetical protein;protein_id=PDP48347.1;transl_table=11 NSLS01000040.1 Genbank pseudogene 2019 2325 . - . ID=gene-CLI77_09280;Name=CLI77_09280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09280;pseudo=true NSLS01000040.1 Protein Homology CDS 2019 2325 . - 0 ID=cds-CLI77_09280;Parent=gene-CLI77_09280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457293.1;locus_tag=CLI77_09280;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000040.1 Genbank gene 2584 3354 . - . ID=gene-CLI77_09285;Name=CLI77_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09285 NSLS01000040.1 Protein Homology CDS 2584 3354 . - 0 ID=cds-PDP48348.1;Parent=gene-CLI77_09285;Dbxref=NCBI_GP:PDP48348.1;Name=PDP48348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584665.1;locus_tag=CLI77_09285;product=hypothetical protein;protein_id=PDP48348.1;transl_table=11 NSLS01000040.1 cmsearch riboswitch 3522 3632 . + . ID=id-NSLS01000040.1:3522..3632;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000040.1 Genbank gene 3724 3924 . + . ID=gene-CLI77_09290;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CLI77_09290 NSLS01000040.1 Protein Homology CDS 3724 3924 . + 0 ID=cds-PDP48349.1;Parent=gene-CLI77_09290;Dbxref=NCBI_GP:PDP48349.1;Name=PDP48349.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584666.1;locus_tag=CLI77_09290;product=thiamine biosynthesis protein ThiS;protein_id=PDP48349.1;transl_table=11 NSLS01000040.1 Genbank gene 3994 5757 . + . ID=gene-CLI77_09295;Name=CLI77_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09295 NSLS01000040.1 Protein Homology CDS 3994 5757 . + 0 ID=cds-PDP48350.1;Parent=gene-CLI77_09295;Dbxref=NCBI_GP:PDP48350.1;Name=PDP48350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457290.1;locus_tag=CLI77_09295;product=phosphomethylpyrimidine synthase ThiC;protein_id=PDP48350.1;transl_table=11 NSLS01000040.1 Genbank gene 5754 7697 . + . ID=gene-CLI77_09300;Name=CLI77_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09300 NSLS01000040.1 Protein Homology CDS 5754 7697 . + 0 ID=cds-PDP48351.1;Parent=gene-CLI77_09300;Dbxref=NCBI_GP:PDP48351.1;Name=PDP48351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873748.1;locus_tag=CLI77_09300;product=thiamine phosphate synthase;protein_id=PDP48351.1;transl_table=11 NSLS01000040.1 Genbank gene 7756 8535 . + . ID=gene-CLI77_09305;Name=CLI77_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09305 NSLS01000040.1 Protein Homology CDS 7756 8535 . + 0 ID=cds-PDP48352.1;Parent=gene-CLI77_09305;Dbxref=NCBI_GP:PDP48352.1;Name=PDP48352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873775.1;locus_tag=CLI77_09305;product=thiazole synthase;protein_id=PDP48352.1;transl_table=11 NSLS01000040.1 Genbank gene 8548 9660 . + . ID=gene-CLI77_09310;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CLI77_09310 NSLS01000040.1 Protein Homology CDS 8548 9660 . + 0 ID=cds-PDP48353.1;Parent=gene-CLI77_09310;Dbxref=NCBI_GP:PDP48353.1;Name=PDP48353.1;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965944.1;locus_tag=CLI77_09310;product=2-iminoacetate synthase ThiH;protein_id=PDP48353.1;transl_table=11 NSLS01000040.1 Genbank gene 9780 10463 . - . ID=gene-CLI77_09315;Name=CLI77_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09315 NSLS01000040.1 Protein Homology CDS 9780 10463 . - 0 ID=cds-PDP48354.1;Parent=gene-CLI77_09315;Dbxref=NCBI_GP:PDP48354.1;Name=PDP48354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816056.1;locus_tag=CLI77_09315;product=PorT family protein;protein_id=PDP48354.1;transl_table=11 NSLS01000040.1 Genbank gene 10658 11218 . - . ID=gene-CLI77_09320;Name=CLI77_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09320 NSLS01000040.1 Protein Homology CDS 10658 11218 . - 0 ID=cds-PDP48355.1;Parent=gene-CLI77_09320;Dbxref=NCBI_GP:PDP48355.1;Name=PDP48355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457284.1;locus_tag=CLI77_09320;product=hypothetical protein;protein_id=PDP48355.1;transl_table=11 NSLS01000040.1 Genbank gene 11439 11515 . - . ID=gene-CLI77_09325;Name=CLI77_09325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_09325 NSLS01000040.1 tRNAscan-SE tRNA 11439 11515 . - . ID=rna-CLI77_09325;Parent=gene-CLI77_09325;anticodon=(pos:complement(11479..11481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_09325;product=tRNA-Met NSLS01000040.1 tRNAscan-SE exon 11439 11515 . - . ID=exon-CLI77_09325-1;Parent=rna-CLI77_09325;anticodon=(pos:complement(11479..11481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_09325;product=tRNA-Met NSLS01000040.1 Genbank gene 12159 13781 . + . ID=gene-CLI77_09330;Name=CLI77_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09330 NSLS01000040.1 Protein Homology CDS 12159 13781 . + 0 ID=cds-PDP48356.1;Parent=gene-CLI77_09330;Dbxref=NCBI_GP:PDP48356.1;Name=PDP48356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816061.1;locus_tag=CLI77_09330;product=secretion protein;protein_id=PDP48356.1;transl_table=11 NSLS01000040.1 Genbank gene 13957 14931 . + . ID=gene-CLI77_09335;Name=CLI77_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09335 NSLS01000040.1 Protein Homology CDS 13957 14931 . + 0 ID=cds-PDP48357.1;Parent=gene-CLI77_09335;Dbxref=NCBI_GP:PDP48357.1;Name=PDP48357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457282.1;locus_tag=CLI77_09335;product=hypothetical protein;protein_id=PDP48357.1;transl_table=11 NSLS01000040.1 Genbank pseudogene 15030 15935 . + . ID=gene-CLI77_09340;Name=CLI77_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09340;pseudo=true NSLS01000040.1 Protein Homology CDS 15030 15935 . + 0 ID=cds-CLI77_09340;Parent=gene-CLI77_09340;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965803.1;locus_tag=CLI77_09340;product=secretion protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000041.1 1 16040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000041.1 Genbank region 1 16040 . + . ID=NSLS01000041.1:1..16040;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000041.1 Genbank gene 20 280 . - . ID=gene-CLI77_09345;Name=CLI77_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09345 NSLS01000041.1 Protein Homology CDS 20 280 . - 0 ID=cds-PDP48321.1;Parent=gene-CLI77_09345;Dbxref=NCBI_GP:PDP48321.1;Name=PDP48321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815745.1;locus_tag=CLI77_09345;product=hypothetical protein;protein_id=PDP48321.1;transl_table=11 NSLS01000041.1 Genbank gene 301 1710 . - . ID=gene-CLI77_09350;Name=CLI77_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09350 NSLS01000041.1 Protein Homology CDS 301 1710 . - 0 ID=cds-PDP48322.1;Parent=gene-CLI77_09350;Dbxref=NCBI_GP:PDP48322.1;Name=PDP48322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364796.1;locus_tag=CLI77_09350;product=asparagine--tRNA ligase;protein_id=PDP48322.1;transl_table=11 NSLS01000041.1 Genbank gene 1742 3061 . - . ID=gene-CLI77_09355;Name=CLI77_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09355 NSLS01000041.1 Protein Homology CDS 1742 3061 . - 0 ID=cds-PDP48323.1;Parent=gene-CLI77_09355;Dbxref=NCBI_GP:PDP48323.1;Name=PDP48323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815888.1;locus_tag=CLI77_09355;product=pseudouridine synthase;protein_id=PDP48323.1;transl_table=11 NSLS01000041.1 Genbank gene 3162 4505 . - . ID=gene-CLI77_09360;Name=CLI77_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09360 NSLS01000041.1 Protein Homology CDS 3162 4505 . - 0 ID=cds-PDP48324.1;Parent=gene-CLI77_09360;Dbxref=NCBI_GP:PDP48324.1;Name=PDP48324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815887.1;locus_tag=CLI77_09360;product=adenylosuccinate lyase;protein_id=PDP48324.1;transl_table=11 NSLS01000041.1 Genbank gene 4641 5204 . - . ID=gene-CLI77_09365;Name=CLI77_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09365 NSLS01000041.1 Protein Homology CDS 4641 5204 . - 0 ID=cds-PDP48325.1;Parent=gene-CLI77_09365;Dbxref=NCBI_GP:PDP48325.1;Name=PDP48325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965675.1;locus_tag=CLI77_09365;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP48325.1;transl_table=11 NSLS01000041.1 Genbank gene 5227 5877 . - . ID=gene-CLI77_09370;Name=CLI77_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09370 NSLS01000041.1 Protein Homology CDS 5227 5877 . - 0 ID=cds-PDP48326.1;Parent=gene-CLI77_09370;Dbxref=NCBI_GP:PDP48326.1;Name=PDP48326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965674.1;locus_tag=CLI77_09370;product=hypothetical protein;protein_id=PDP48326.1;transl_table=11 NSLS01000041.1 Genbank gene 5902 7089 . - . ID=gene-CLI77_09375;Name=CLI77_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09375 NSLS01000041.1 Protein Homology CDS 5902 7089 . - 0 ID=cds-PDP48327.1;Parent=gene-CLI77_09375;Dbxref=NCBI_GP:PDP48327.1;Name=PDP48327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815885.1;locus_tag=CLI77_09375;product=uracil permease;protein_id=PDP48327.1;transl_table=11 NSLS01000041.1 Genbank gene 7429 7896 . + . ID=gene-CLI77_09380;Name=CLI77_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09380 NSLS01000041.1 Protein Homology CDS 7429 7896 . + 0 ID=cds-PDP48328.1;Parent=gene-CLI77_09380;Dbxref=NCBI_GP:PDP48328.1;Name=PDP48328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815884.1;locus_tag=CLI77_09380;product=transcriptional regulator;protein_id=PDP48328.1;transl_table=11 NSLS01000041.1 Genbank gene 7943 9325 . + . ID=gene-CLI77_09385;Name=CLI77_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09385 NSLS01000041.1 Protein Homology CDS 7943 9325 . + 0 ID=cds-PDP48329.1;Parent=gene-CLI77_09385;Dbxref=NCBI_GP:PDP48329.1;Name=PDP48329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873634.1;locus_tag=CLI77_09385;product=exodeoxyribonuclease VII large subunit;protein_id=PDP48329.1;transl_table=11 NSLS01000041.1 Genbank gene 9604 12156 . + . ID=gene-CLI77_09390;Name=CLI77_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09390 NSLS01000041.1 Protein Homology CDS 9604 12156 . + 0 ID=cds-PDP48330.1;Parent=gene-CLI77_09390;Dbxref=NCBI_GP:PDP48330.1;Name=PDP48330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331646.1;locus_tag=CLI77_09390;product=ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent;protein_id=PDP48330.1;transl_table=11 NSLS01000041.1 Genbank gene 12347 14389 . + . ID=gene-CLI77_09395;Name=CLI77_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09395 NSLS01000041.1 Protein Homology CDS 12347 14389 . + 0 ID=cds-PDP48331.1;Parent=gene-CLI77_09395;Dbxref=NCBI_GP:PDP48331.1;Name=PDP48331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965669.1;locus_tag=CLI77_09395;product=hypothetical protein;protein_id=PDP48331.1;transl_table=11 NSLS01000041.1 Genbank gene 14757 14897 . - . ID=gene-CLI77_09400;Name=CLI77_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09400 NSLS01000041.1 Protein Homology CDS 14757 14897 . - 0 ID=cds-PDP48332.1;Parent=gene-CLI77_09400;Dbxref=NCBI_GP:PDP48332.1;Name=PDP48332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_09400;product=DNA methylase;protein_id=PDP48332.1;transl_table=11 NSLS01000041.1 Genbank gene 14911 15996 . - . ID=gene-CLI77_09405;Name=CLI77_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09405 NSLS01000041.1 Protein Homology CDS 14911 15996 . - 0 ID=cds-PDP48333.1;Parent=gene-CLI77_09405;Dbxref=NCBI_GP:PDP48333.1;Name=PDP48333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_09405;product=IS5/IS1182 family transposase;protein_id=PDP48333.1;transl_table=11 ##sequence-region NSLS01000042.1 1 16013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000042.1 Genbank region 1 16013 . + . ID=NSLS01000042.1:1..16013;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000042.1 Genbank gene 1 109 . + . ID=gene-CLI77_09410;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI77_09410 NSLS01000042.1 cmsearch rRNA 1 109 . + . ID=rna-CLI77_09410;Parent=gene-CLI77_09410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_09410;product=5S ribosomal RNA NSLS01000042.1 cmsearch exon 1 109 . + . ID=exon-CLI77_09410-1;Parent=rna-CLI77_09410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_09410;product=5S ribosomal RNA NSLS01000042.1 Genbank gene 1291 2658 . - . ID=gene-CLI77_09415;Name=CLI77_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09415 NSLS01000042.1 Protein Homology CDS 1291 2658 . - 0 ID=cds-PDP48298.1;Parent=gene-CLI77_09415;Dbxref=NCBI_GP:PDP48298.1;Name=PDP48298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815549.1;locus_tag=CLI77_09415;product=transporter;protein_id=PDP48298.1;transl_table=11 NSLS01000042.1 Genbank gene 2655 3761 . - . ID=gene-CLI77_09420;Name=CLI77_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09420 NSLS01000042.1 Protein Homology CDS 2655 3761 . - 0 ID=cds-PDP48299.1;Parent=gene-CLI77_09420;Dbxref=NCBI_GP:PDP48299.1;Name=PDP48299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583983.1;locus_tag=CLI77_09420;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP48299.1;transl_table=11 NSLS01000042.1 Genbank gene 3831 5093 . - . ID=gene-CLI77_09425;Name=CLI77_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09425 NSLS01000042.1 Protein Homology CDS 3831 5093 . - 0 ID=cds-PDP48300.1;Parent=gene-CLI77_09425;Dbxref=NCBI_GP:PDP48300.1;Name=PDP48300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875125.1;locus_tag=CLI77_09425;product=ABC transporter permease;protein_id=PDP48300.1;transl_table=11 NSLS01000042.1 Genbank gene 5116 6390 . - . ID=gene-CLI77_09430;Name=CLI77_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09430 NSLS01000042.1 Protein Homology CDS 5116 6390 . - 0 ID=cds-PDP48301.1;Parent=gene-CLI77_09430;Dbxref=NCBI_GP:PDP48301.1;Name=PDP48301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457513.1;locus_tag=CLI77_09430;product=ABC transporter permease;protein_id=PDP48301.1;transl_table=11 NSLS01000042.1 Genbank gene 6415 7074 . - . ID=gene-CLI77_09435;Name=CLI77_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09435 NSLS01000042.1 Protein Homology CDS 6415 7074 . - 0 ID=cds-PDP48302.1;Parent=gene-CLI77_09435;Dbxref=NCBI_GP:PDP48302.1;Name=PDP48302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875129.1;locus_tag=CLI77_09435;product=ABC transporter ATP-binding protein;protein_id=PDP48302.1;transl_table=11 NSLS01000042.1 Genbank gene 7093 7500 . - . ID=gene-CLI77_09440;Name=CLI77_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09440 NSLS01000042.1 Protein Homology CDS 7093 7500 . - 0 ID=cds-PDP48303.1;Parent=gene-CLI77_09440;Dbxref=NCBI_GP:PDP48303.1;Name=PDP48303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815551.1;locus_tag=CLI77_09440;product=hypothetical protein;protein_id=PDP48303.1;transl_table=11 NSLS01000042.1 Genbank gene 7983 8507 . + . ID=gene-CLI77_09445;Name=CLI77_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09445 NSLS01000042.1 Protein Homology CDS 7983 8507 . + 0 ID=cds-PDP48304.1;Parent=gene-CLI77_09445;Dbxref=NCBI_GP:PDP48304.1;Name=PDP48304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457515.1;locus_tag=CLI77_09445;product=RNA polymerase subunit sigma-70;protein_id=PDP48304.1;transl_table=11 NSLS01000042.1 Genbank gene 8504 8896 . + . ID=gene-CLI77_09450;Name=CLI77_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09450 NSLS01000042.1 Protein Homology CDS 8504 8896 . + 0 ID=cds-PDP48305.1;Parent=gene-CLI77_09450;Dbxref=NCBI_GP:PDP48305.1;Name=PDP48305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583989.1;locus_tag=CLI77_09450;product=hypothetical protein;protein_id=PDP48305.1;transl_table=11 NSLS01000042.1 Genbank gene 9094 9348 . - . ID=gene-CLI77_09455;Name=CLI77_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09455 NSLS01000042.1 GeneMarkS+ CDS 9094 9348 . - 0 ID=cds-PDP48306.1;Parent=gene-CLI77_09455;Dbxref=NCBI_GP:PDP48306.1;Name=PDP48306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_09455;product=hypothetical protein;protein_id=PDP48306.1;transl_table=11 NSLS01000042.1 Genbank gene 9472 9669 . + . ID=gene-CLI77_09460;Name=CLI77_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09460 NSLS01000042.1 Protein Homology CDS 9472 9669 . + 0 ID=cds-PDP48311.1;Parent=gene-CLI77_09460;Dbxref=NCBI_GP:PDP48311.1;Name=PDP48311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816371.1;locus_tag=CLI77_09460;product=hypothetical protein;protein_id=PDP48311.1;transl_table=11 NSLS01000042.1 Genbank gene 9774 11921 . - . ID=gene-CLI77_09465;Name=CLI77_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09465 NSLS01000042.1 Protein Homology CDS 9774 11921 . - 0 ID=cds-PDP48307.1;Parent=gene-CLI77_09465;Dbxref=NCBI_GP:PDP48307.1;Name=PDP48307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006797728.1;locus_tag=CLI77_09465;product=methylmalonyl-CoA mutase;protein_id=PDP48307.1;transl_table=11 NSLS01000042.1 Genbank gene 11950 13806 . - . ID=gene-CLI77_09470;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=CLI77_09470 NSLS01000042.1 Protein Homology CDS 11950 13806 . - 0 ID=cds-PDP48308.1;Parent=gene-CLI77_09470;Dbxref=NCBI_GP:PDP48308.1;Name=PDP48308.1;gbkey=CDS;gene=mutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965140.1;locus_tag=CLI77_09470;product=methylmalonyl-CoA mutase small subunit;protein_id=PDP48308.1;transl_table=11 NSLS01000042.1 Genbank gene 14053 15579 . + . ID=gene-CLI77_09475;Name=CLI77_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09475 NSLS01000042.1 Protein Homology CDS 14053 15579 . + 0 ID=cds-PDP48309.1;Parent=gene-CLI77_09475;Dbxref=NCBI_GP:PDP48309.1;Name=PDP48309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585639.1;locus_tag=CLI77_09475;product=T9SS C-terminal target domain-containing protein;protein_id=PDP48309.1;transl_table=11 NSLS01000042.1 Genbank gene 15654 15965 . + . ID=gene-CLI77_09480;Name=CLI77_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09480 NSLS01000042.1 Protein Homology CDS 15654 15965 . + 0 ID=cds-PDP48310.1;Parent=gene-CLI77_09480;Dbxref=NCBI_GP:PDP48310.1;Name=PDP48310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874264.1;locus_tag=CLI77_09480;product=hypothetical protein;protein_id=PDP48310.1;transl_table=11 ##sequence-region NSLS01000043.1 1 15434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000043.1 Genbank region 1 15434 . + . ID=NSLS01000043.1:1..15434;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000043.1 Genbank pseudogene 1 1115 . + . ID=gene-CLI77_09485;Name=CLI77_09485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09485;pseudo=true NSLS01000043.1 Protein Homology CDS 1 1115 . + 0 ID=cds-CLI77_09485;Parent=gene-CLI77_09485;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_09485;product=IS3 family transposase;pseudo=true;transl_table=11 NSLS01000043.1 Genbank gene 1570 2199 . + . ID=gene-CLI77_09490;Name=CLI77_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09490 NSLS01000043.1 Protein Homology CDS 1570 2199 . + 0 ID=cds-PDP48273.1;Parent=gene-CLI77_09490;Dbxref=NCBI_GP:PDP48273.1;Name=PDP48273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457544.1;locus_tag=CLI77_09490;product=hypothetical protein;protein_id=PDP48273.1;transl_table=11 NSLS01000043.1 Genbank gene 2412 3479 . + . ID=gene-CLI77_09495;Name=CLI77_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09495 NSLS01000043.1 Protein Homology CDS 2412 3479 . + 0 ID=cds-PDP48274.1;Parent=gene-CLI77_09495;Dbxref=NCBI_GP:PDP48274.1;Name=PDP48274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815579.1;locus_tag=CLI77_09495;product=galactose-1-epimerase;protein_id=PDP48274.1;transl_table=11 NSLS01000043.1 Genbank gene 3529 4683 . + . ID=gene-CLI77_09500;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CLI77_09500 NSLS01000043.1 Protein Homology CDS 3529 4683 . + 0 ID=cds-PDP48275.1;Parent=gene-CLI77_09500;Dbxref=NCBI_GP:PDP48275.1;Name=PDP48275.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809283.1;locus_tag=CLI77_09500;product=galactokinase;protein_id=PDP48275.1;transl_table=11 NSLS01000043.1 Genbank gene 4816 5241 . - . ID=gene-CLI77_09505;Name=CLI77_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09505 NSLS01000043.1 Protein Homology CDS 4816 5241 . - 0 ID=cds-PDP48276.1;Parent=gene-CLI77_09505;Dbxref=NCBI_GP:PDP48276.1;Name=PDP48276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457547.1;locus_tag=CLI77_09505;product=hypothetical protein;protein_id=PDP48276.1;transl_table=11 NSLS01000043.1 Genbank gene 5307 5954 . - . ID=gene-CLI77_09510;Name=CLI77_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09510 NSLS01000043.1 Protein Homology CDS 5307 5954 . - 0 ID=cds-PDP48277.1;Parent=gene-CLI77_09510;Dbxref=NCBI_GP:PDP48277.1;Name=PDP48277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584022.1;locus_tag=CLI77_09510;product=hypothetical protein;protein_id=PDP48277.1;transl_table=11 NSLS01000043.1 Genbank gene 5968 8553 . - . ID=gene-CLI77_09515;Name=CLI77_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09515 NSLS01000043.1 Protein Homology CDS 5968 8553 . - 0 ID=cds-PDP48278.1;Parent=gene-CLI77_09515;Dbxref=NCBI_GP:PDP48278.1;Name=PDP48278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457549.1;locus_tag=CLI77_09515;product=cell division protein FtsK;protein_id=PDP48278.1;transl_table=11 NSLS01000043.1 Genbank gene 8757 9872 . - . ID=gene-CLI77_09520;Name=CLI77_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09520 NSLS01000043.1 Protein Homology CDS 8757 9872 . - 0 ID=cds-PDP48279.1;Parent=gene-CLI77_09520;Dbxref=NCBI_GP:PDP48279.1;Name=PDP48279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584024.1;locus_tag=CLI77_09520;product=thiol:disulfide interchange protein;protein_id=PDP48279.1;transl_table=11 NSLS01000043.1 Genbank gene 10028 11362 . - . ID=gene-CLI77_09525;Name=CLI77_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09525 NSLS01000043.1 Protein Homology CDS 10028 11362 . - 0 ID=cds-PDP48280.1;Parent=gene-CLI77_09525;Dbxref=NCBI_GP:PDP48280.1;Name=PDP48280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874446.1;locus_tag=CLI77_09525;product=MATE family efflux transporter;protein_id=PDP48280.1;transl_table=11 NSLS01000043.1 Genbank gene 11353 11856 . - . ID=gene-CLI77_09530;Name=CLI77_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09530 NSLS01000043.1 Protein Homology CDS 11353 11856 . - 0 ID=cds-PDP48281.1;Parent=gene-CLI77_09530;Dbxref=NCBI_GP:PDP48281.1;Name=PDP48281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457551.1;locus_tag=CLI77_09530;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=PDP48281.1;transl_table=11 NSLS01000043.1 Genbank gene 11864 14071 . - . ID=gene-CLI77_09535;Name=CLI77_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09535 NSLS01000043.1 Protein Homology CDS 11864 14071 . - 0 ID=cds-PDP48282.1;Parent=gene-CLI77_09535;Dbxref=NCBI_GP:PDP48282.1;Name=PDP48282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874448.1;locus_tag=CLI77_09535;product=ATPase;protein_id=PDP48282.1;transl_table=11 NSLS01000043.1 Genbank gene 14107 14370 . - . ID=gene-CLI77_09540;Name=CLI77_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09540 NSLS01000043.1 Protein Homology CDS 14107 14370 . - 0 ID=cds-PDP48283.1;Parent=gene-CLI77_09540;Dbxref=NCBI_GP:PDP48283.1;Name=PDP48283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874447.1;locus_tag=CLI77_09540;product=cation transporter;protein_id=PDP48283.1;transl_table=11 NSLS01000043.1 Genbank gene 14807 15434 . - . ID=gene-CLI77_09545;Name=CLI77_09545;end_range=15434,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09545;partial=true NSLS01000043.1 Protein Homology CDS 14807 15434 . - 1 ID=cds-PDP48284.1;Parent=gene-CLI77_09545;Dbxref=NCBI_GP:PDP48284.1;Name=PDP48284.1;end_range=15434,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_09545;partial=true;product=IS3 family transposase;protein_id=PDP48284.1;transl_table=11 ##sequence-region NSLS01000044.1 1 13991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000044.1 Genbank region 1 13991 . + . ID=NSLS01000044.1:1..13991;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000044.1 Genbank gene 78 512 . - . ID=gene-CLI77_09550;Name=CLI77_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09550 NSLS01000044.1 Protein Homology CDS 78 512 . - 0 ID=cds-PDP48253.1;Parent=gene-CLI77_09550;Dbxref=NCBI_GP:PDP48253.1;Name=PDP48253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584161.1;locus_tag=CLI77_09550;product=hypothetical protein;protein_id=PDP48253.1;transl_table=11 NSLS01000044.1 Genbank gene 520 1161 . - . ID=gene-CLI77_09555;Name=CLI77_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09555 NSLS01000044.1 Protein Homology CDS 520 1161 . - 0 ID=cds-PDP48254.1;Parent=gene-CLI77_09555;Dbxref=NCBI_GP:PDP48254.1;Name=PDP48254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584162.1;locus_tag=CLI77_09555;product=DNA-binding protein;protein_id=PDP48254.1;transl_table=11 NSLS01000044.1 Genbank gene 1628 2773 . + . ID=gene-CLI77_09560;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CLI77_09560 NSLS01000044.1 Protein Homology CDS 1628 2773 . + 0 ID=cds-PDP48255.1;Parent=gene-CLI77_09560;Dbxref=NCBI_GP:PDP48255.1;Name=PDP48255.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964590.1;locus_tag=CLI77_09560;product=DNA polymerase III subunit delta';protein_id=PDP48255.1;transl_table=11 NSLS01000044.1 Genbank gene 3017 5176 . + . ID=gene-CLI77_09565;Name=CLI77_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09565 NSLS01000044.1 Protein Homology CDS 3017 5176 . + 0 ID=cds-PDP48256.1;Parent=gene-CLI77_09565;Dbxref=NCBI_GP:PDP48256.1;Name=PDP48256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815707.1;locus_tag=CLI77_09565;product=elongation factor G;protein_id=PDP48256.1;transl_table=11 NSLS01000044.1 Genbank gene 5384 7288 . - . ID=gene-CLI77_09570;Name=CLI77_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09570 NSLS01000044.1 Protein Homology CDS 5384 7288 . - 0 ID=cds-PDP48257.1;Parent=gene-CLI77_09570;Dbxref=NCBI_GP:PDP48257.1;Name=PDP48257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457957.1;locus_tag=CLI77_09570;product=YgiQ family radical SAM protein;protein_id=PDP48257.1;transl_table=11 NSLS01000044.1 Genbank gene 7267 8091 . - . ID=gene-CLI77_09575;Name=CLI77_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09575 NSLS01000044.1 Protein Homology CDS 7267 8091 . - 0 ID=cds-PDP48258.1;Parent=gene-CLI77_09575;Dbxref=NCBI_GP:PDP48258.1;Name=PDP48258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875189.1;locus_tag=CLI77_09575;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=PDP48258.1;transl_table=11 NSLS01000044.1 Genbank gene 8120 9421 . - . ID=gene-CLI77_09580;Name=CLI77_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09580 NSLS01000044.1 Protein Homology CDS 8120 9421 . - 0 ID=cds-PDP48259.1;Parent=gene-CLI77_09580;Dbxref=NCBI_GP:PDP48259.1;Name=PDP48259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964594.1;locus_tag=CLI77_09580;product=guanine permease;protein_id=PDP48259.1;transl_table=11 NSLS01000044.1 Genbank gene 9442 10164 . - . ID=gene-CLI77_09585;Name=CLI77_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09585 NSLS01000044.1 Protein Homology CDS 9442 10164 . - 0 ID=cds-PDP48260.1;Parent=gene-CLI77_09585;Dbxref=NCBI_GP:PDP48260.1;Name=PDP48260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815711.1;locus_tag=CLI77_09585;product=DUF5020 domain-containing protein;protein_id=PDP48260.1;transl_table=11 NSLS01000044.1 Genbank gene 10164 12920 . - . ID=gene-CLI77_09590;Name=CLI77_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09590 NSLS01000044.1 Protein Homology CDS 10164 12920 . - 0 ID=cds-PDP48261.1;Parent=gene-CLI77_09590;Dbxref=NCBI_GP:PDP48261.1;Name=PDP48261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584169.1;locus_tag=CLI77_09590;product=calcium-translocating P-type ATPase%2C PMCA-type;protein_id=PDP48261.1;transl_table=11 NSLS01000044.1 Genbank pseudogene 13249 13794 . - . ID=gene-CLI77_09595;Name=CLI77_09595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09595;pseudo=true NSLS01000044.1 Protein Homology CDS 13249 13794 . - 0 ID=cds-CLI77_09595;Parent=gene-CLI77_09595;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_09595;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000045.1 1 13975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000045.1 Genbank region 1 13975 . + . ID=NSLS01000045.1:1..13975;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000045.1 Genbank pseudogene 40 126 . + . ID=gene-CLI77_09600;Name=CLI77_09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09600;pseudo=true NSLS01000045.1 Protein Homology CDS 40 126 . + 0 ID=cds-CLI77_09600;Parent=gene-CLI77_09600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007479796.1;locus_tag=CLI77_09600;product=conjugative transposon protein TraN;pseudo=true;transl_table=11 NSLS01000045.1 Genbank pseudogene 129 1895 . + . ID=gene-CLI77_09605;Name=CLI77_09605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09605;pseudo=true NSLS01000045.1 Protein Homology CDS 129 1895 . + 0 ID=cds-CLI77_09605;Parent=gene-CLI77_09605;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457228.1;locus_tag=CLI77_09605;product=DNA topoisomerase I;pseudo=true;transl_table=11 NSLS01000045.1 Genbank gene 2170 2601 . + . ID=gene-CLI77_09610;Name=CLI77_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09610 NSLS01000045.1 Protein Homology CDS 2170 2601 . + 0 ID=cds-PDP48234.1;Parent=gene-CLI77_09610;Dbxref=NCBI_GP:PDP48234.1;Name=PDP48234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004341620.1;locus_tag=CLI77_09610;product=DUF1896 domain-containing protein;protein_id=PDP48234.1;transl_table=11 NSLS01000045.1 Genbank gene 2588 8080 . + . ID=gene-CLI77_09615;Name=CLI77_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09615 NSLS01000045.1 Protein Homology CDS 2588 8080 . + 0 ID=cds-PDP48235.1;Parent=gene-CLI77_09615;Dbxref=NCBI_GP:PDP48235.1;Name=PDP48235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362425.1;locus_tag=CLI77_09615;product=DNA methylase;protein_id=PDP48235.1;transl_table=11 NSLS01000045.1 Genbank gene 8185 8502 . - . ID=gene-CLI77_09620;Name=CLI77_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09620 NSLS01000045.1 Protein Homology CDS 8185 8502 . - 0 ID=cds-PDP48236.1;Parent=gene-CLI77_09620;Dbxref=NCBI_GP:PDP48236.1;Name=PDP48236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815805.1;locus_tag=CLI77_09620;product=DNA-binding protein;protein_id=PDP48236.1;transl_table=11 NSLS01000045.1 Genbank gene 8486 8839 . - . ID=gene-CLI77_09625;Name=CLI77_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09625 NSLS01000045.1 Protein Homology CDS 8486 8839 . - 0 ID=cds-PDP48237.1;Parent=gene-CLI77_09625;Dbxref=NCBI_GP:PDP48237.1;Name=PDP48237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457233.1;locus_tag=CLI77_09625;product=DNA-binding protein;protein_id=PDP48237.1;transl_table=11 NSLS01000045.1 Genbank gene 9061 9339 . + . ID=gene-CLI77_09630;Name=CLI77_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09630 NSLS01000045.1 Protein Homology CDS 9061 9339 . + 0 ID=cds-PDP48238.1;Parent=gene-CLI77_09630;Dbxref=NCBI_GP:PDP48238.1;Name=PDP48238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564112.1;locus_tag=CLI77_09630;product=DNA-binding protein;protein_id=PDP48238.1;transl_table=11 NSLS01000045.1 Genbank gene 9376 9678 . + . ID=gene-CLI77_09635;Name=CLI77_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09635 NSLS01000045.1 Protein Homology CDS 9376 9678 . + 0 ID=cds-PDP48239.1;Parent=gene-CLI77_09635;Dbxref=NCBI_GP:PDP48239.1;Name=PDP48239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564113.1;locus_tag=CLI77_09635;product=DNA-binding protein;protein_id=PDP48239.1;transl_table=11 NSLS01000045.1 Genbank gene 9728 10090 . - . ID=gene-CLI77_09640;Name=CLI77_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09640 NSLS01000045.1 Protein Homology CDS 9728 10090 . - 0 ID=cds-PDP48240.1;Parent=gene-CLI77_09640;Dbxref=NCBI_GP:PDP48240.1;Name=PDP48240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008564114.1;locus_tag=CLI77_09640;product=hypothetical protein;protein_id=PDP48240.1;transl_table=11 NSLS01000045.1 Genbank gene 10108 11343 . - . ID=gene-CLI77_09645;Name=CLI77_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09645 NSLS01000045.1 Protein Homology CDS 10108 11343 . - 0 ID=cds-PDP48241.1;Parent=gene-CLI77_09645;Dbxref=NCBI_GP:PDP48241.1;Name=PDP48241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364383.1;locus_tag=CLI77_09645;product=integrase;protein_id=PDP48241.1;transl_table=11 NSLS01000045.1 Genbank gene 11806 13975 . + . ID=gene-CLI77_09650;Name=CLI77_09650;end_range=13975,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09650;partial=true NSLS01000045.1 Protein Homology CDS 11806 13975 . + 0 ID=cds-PDP48242.1;Parent=gene-CLI77_09650;Dbxref=NCBI_GP:PDP48242.1;Name=PDP48242.1;end_range=13975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_09650;partial=true;product=hemagglutinin;protein_id=PDP48242.1;transl_table=11 ##sequence-region NSLS01000046.1 1 13938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000046.1 Genbank region 1 13938 . + . ID=NSLS01000046.1:1..13938;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000046.1 Genbank gene 359 1780 . + . ID=gene-CLI77_09655;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CLI77_09655 NSLS01000046.1 Protein Homology CDS 359 1780 . + 0 ID=cds-PDP48213.1;Parent=gene-CLI77_09655;Dbxref=NCBI_GP:PDP48213.1;Name=PDP48213.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965134.1;locus_tag=CLI77_09655;product=cardiolipin synthase;protein_id=PDP48213.1;transl_table=11 NSLS01000046.1 Genbank gene 1848 4088 . + . ID=gene-CLI77_09660;Name=CLI77_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09660 NSLS01000046.1 Protein Homology CDS 1848 4088 . + 0 ID=cds-PDP48214.1;Parent=gene-CLI77_09660;Dbxref=NCBI_GP:PDP48214.1;Name=PDP48214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457527.1;locus_tag=CLI77_09660;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=PDP48214.1;transl_table=11 NSLS01000046.1 Genbank gene 4346 7333 . + . ID=gene-CLI77_09665;Name=CLI77_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09665 NSLS01000046.1 Protein Homology CDS 4346 7333 . + 0 ID=cds-PDP48215.1;Parent=gene-CLI77_09665;Dbxref=NCBI_GP:PDP48215.1;Name=PDP48215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815561.1;locus_tag=CLI77_09665;product=hypothetical protein;protein_id=PDP48215.1;transl_table=11 NSLS01000046.1 Genbank gene 7369 9150 . + . ID=gene-CLI77_09670;Name=CLI77_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09670 NSLS01000046.1 Protein Homology CDS 7369 9150 . + 0 ID=cds-PDP48216.1;Parent=gene-CLI77_09670;Dbxref=NCBI_GP:PDP48216.1;Name=PDP48216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457525.1;locus_tag=CLI77_09670;product=hypothetical protein;protein_id=PDP48216.1;transl_table=11 NSLS01000046.1 Genbank gene 9175 10398 . + . ID=gene-CLI77_09675;Name=CLI77_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09675 NSLS01000046.1 Protein Homology CDS 9175 10398 . + 0 ID=cds-PDP48217.1;Parent=gene-CLI77_09675;Dbxref=NCBI_GP:PDP48217.1;Name=PDP48217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583996.1;locus_tag=CLI77_09675;product=haloacid dehalogenase;protein_id=PDP48217.1;transl_table=11 NSLS01000046.1 Genbank gene 10430 11101 . + . ID=gene-CLI77_09680;Name=CLI77_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09680 NSLS01000046.1 Protein Homology CDS 10430 11101 . + 0 ID=cds-PDP48218.1;Parent=gene-CLI77_09680;Dbxref=NCBI_GP:PDP48218.1;Name=PDP48218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583995.1;locus_tag=CLI77_09680;product=peptidase M15;protein_id=PDP48218.1;transl_table=11 NSLS01000046.1 Genbank gene 11231 11896 . - . ID=gene-CLI77_09685;Name=CLI77_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09685 NSLS01000046.1 Protein Homology CDS 11231 11896 . - 0 ID=cds-PDP48219.1;Parent=gene-CLI77_09685;Dbxref=NCBI_GP:PDP48219.1;Name=PDP48219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01926.21;locus_tag=CLI77_09685;product=hypothetical protein;protein_id=PDP48219.1;transl_table=11 NSLS01000046.1 Genbank gene 11909 12691 . - . ID=gene-CLI77_09690;Name=CLI77_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09690 NSLS01000046.1 GeneMarkS+ CDS 11909 12691 . - 0 ID=cds-PDP48220.1;Parent=gene-CLI77_09690;Dbxref=NCBI_GP:PDP48220.1;Name=PDP48220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_09690;product=hypothetical protein;protein_id=PDP48220.1;transl_table=11 NSLS01000046.1 Genbank gene 12709 13161 . - . ID=gene-CLI77_09695;Name=CLI77_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09695 NSLS01000046.1 GeneMarkS+ CDS 12709 13161 . - 0 ID=cds-PDP48221.1;Parent=gene-CLI77_09695;Dbxref=NCBI_GP:PDP48221.1;Name=PDP48221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_09695;product=hypothetical protein;protein_id=PDP48221.1;transl_table=11 NSLS01000046.1 Genbank gene 13164 13391 . - . ID=gene-CLI77_09700;Name=CLI77_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09700 NSLS01000046.1 Protein Homology CDS 13164 13391 . - 0 ID=cds-PDP48222.1;Parent=gene-CLI77_09700;Dbxref=NCBI_GP:PDP48222.1;Name=PDP48222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965082.1;locus_tag=CLI77_09700;product=hypothetical protein;protein_id=PDP48222.1;transl_table=11 NSLS01000046.1 Genbank gene 13469 13936 . - . ID=gene-CLI77_09705;Name=CLI77_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09705 NSLS01000046.1 Protein Homology CDS 13469 13936 . - 0 ID=cds-PDP48223.1;Parent=gene-CLI77_09705;Dbxref=NCBI_GP:PDP48223.1;Name=PDP48223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583867.1;locus_tag=CLI77_09705;product=histidinol phosphate aminotransferase;protein_id=PDP48223.1;transl_table=11 ##sequence-region NSLS01000047.1 1 13609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000047.1 Genbank region 1 13609 . + . ID=NSLS01000047.1:1..13609;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000047.1 Genbank gene 1 194 . + . ID=gene-CLI77_09710;Name=CLI77_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09710;partial=true;start_range=.,1 NSLS01000047.1 Protein Homology CDS 1 194 . + 2 ID=cds-PDP48194.1;Parent=gene-CLI77_09710;Dbxref=NCBI_GP:PDP48194.1;Name=PDP48194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457647.1;locus_tag=CLI77_09710;partial=true;product=histidinol phosphate aminotransferase;protein_id=PDP48194.1;start_range=.,1;transl_table=11 NSLS01000047.1 Genbank gene 336 2012 . - . ID=gene-CLI77_09715;Name=CLI77_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09715 NSLS01000047.1 Protein Homology CDS 336 2012 . - 0 ID=cds-PDP48195.1;Parent=gene-CLI77_09715;Dbxref=NCBI_GP:PDP48195.1;Name=PDP48195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585108.1;locus_tag=CLI77_09715;product=transporter;protein_id=PDP48195.1;transl_table=11 NSLS01000047.1 Genbank gene 2229 3584 . + . ID=gene-CLI77_09720;Name=CLI77_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09720 NSLS01000047.1 Protein Homology CDS 2229 3584 . + 0 ID=cds-PDP48196.1;Parent=gene-CLI77_09720;Dbxref=NCBI_GP:PDP48196.1;Name=PDP48196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458249.1;locus_tag=CLI77_09720;product=peptidase M20;protein_id=PDP48196.1;transl_table=11 NSLS01000047.1 Genbank gene 3659 4933 . + . ID=gene-CLI77_09725;Name=CLI77_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09725 NSLS01000047.1 Protein Homology CDS 3659 4933 . + 0 ID=cds-PDP48197.1;Parent=gene-CLI77_09725;Dbxref=NCBI_GP:PDP48197.1;Name=PDP48197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874032.1;locus_tag=CLI77_09725;product=chlorohydrolase;protein_id=PDP48197.1;transl_table=11 NSLS01000047.1 Genbank gene 4953 5774 . + . ID=gene-CLI77_09730;Name=CLI77_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09730 NSLS01000047.1 Protein Homology CDS 4953 5774 . + 0 ID=cds-PDP48198.1;Parent=gene-CLI77_09730;Dbxref=NCBI_GP:PDP48198.1;Name=PDP48198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965906.1;locus_tag=CLI77_09730;product=purine nucleoside phosphorylase I%2C inosine and guanosine-specific;protein_id=PDP48198.1;transl_table=11 NSLS01000047.1 Genbank pseudogene 6307 6980 . - . ID=gene-CLI77_09735;Name=CLI77_09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09735;pseudo=true NSLS01000047.1 Protein Homology CDS 6307 6980 . - 0 ID=cds-CLI77_09735;Parent=gene-CLI77_09735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874037.1;locus_tag=CLI77_09735;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000047.1 Genbank gene 7146 8285 . - . ID=gene-CLI77_09740;Name=CLI77_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09740 NSLS01000047.1 Protein Homology CDS 7146 8285 . - 0 ID=cds-PDP48199.1;Parent=gene-CLI77_09740;Dbxref=NCBI_GP:PDP48199.1;Name=PDP48199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00753.25;locus_tag=CLI77_09740;product=hypothetical protein;protein_id=PDP48199.1;transl_table=11 NSLS01000047.1 Genbank gene 9084 9602 . + . ID=gene-CLI77_09745;Name=CLI77_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09745 NSLS01000047.1 Protein Homology CDS 9084 9602 . + 0 ID=cds-PDP48200.1;Parent=gene-CLI77_09745;Dbxref=NCBI_GP:PDP48200.1;Name=PDP48200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816316.1;locus_tag=CLI77_09745;product=histidinol phosphate phosphatase;protein_id=PDP48200.1;transl_table=11 NSLS01000047.1 Genbank gene 9814 9996 . - . ID=gene-CLI77_09750;Name=CLI77_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09750 NSLS01000047.1 GeneMarkS+ CDS 9814 9996 . - 0 ID=cds-PDP48201.1;Parent=gene-CLI77_09750;Dbxref=NCBI_GP:PDP48201.1;Name=PDP48201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_09750;product=hypothetical protein;protein_id=PDP48201.1;transl_table=11 NSLS01000047.1 Genbank gene 10128 12950 . + . ID=gene-CLI77_09755;Name=CLI77_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09755 NSLS01000047.1 Protein Homology CDS 10128 12950 . + 0 ID=cds-PDP48202.1;Parent=gene-CLI77_09755;Dbxref=NCBI_GP:PDP48202.1;Name=PDP48202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956068.1;locus_tag=CLI77_09755;product=peptidase;protein_id=PDP48202.1;transl_table=11 NSLS01000047.1 Genbank gene 13034 13216 . - . ID=gene-CLI77_09760;Name=CLI77_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09760 NSLS01000047.1 Protein Homology CDS 13034 13216 . - 0 ID=cds-PDP48203.1;Parent=gene-CLI77_09760;Dbxref=NCBI_GP:PDP48203.1;Name=PDP48203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815466.1;locus_tag=CLI77_09760;product=hypothetical protein;protein_id=PDP48203.1;transl_table=11 ##sequence-region NSLS01000048.1 1 13597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000048.1 Genbank region 1 13597 . + . ID=NSLS01000048.1:1..13597;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000048.1 Genbank pseudogene 358 1446 . + . ID=gene-CLI77_09765;Name=CLI77_09765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09765;pseudo=true NSLS01000048.1 Protein Homology CDS 358 1446 . + 0 ID=cds-CLI77_09765;Parent=gene-CLI77_09765;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873637.1;locus_tag=CLI77_09765;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLS01000048.1 Genbank gene 1760 3469 . - . ID=gene-CLI77_09770;Name=CLI77_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09770 NSLS01000048.1 Protein Homology CDS 1760 3469 . - 0 ID=cds-PDP48172.1;Parent=gene-CLI77_09770;Dbxref=NCBI_GP:PDP48172.1;Name=PDP48172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815928.1;locus_tag=CLI77_09770;product=peptidase S41;protein_id=PDP48172.1;transl_table=11 NSLS01000048.1 Genbank pseudogene 3681 3972 . + . ID=gene-CLI77_09775;Name=CLI77_09775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09775;pseudo=true NSLS01000048.1 Protein Homology CDS 3681 3972 . + 0 ID=cds-CLI77_09775;Parent=gene-CLI77_09775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI77_09775;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000048.1 Genbank gene 4265 5971 . - . ID=gene-CLI77_09780;Name=CLI77_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09780 NSLS01000048.1 Protein Homology CDS 4265 5971 . - 0 ID=cds-PDP48173.1;Parent=gene-CLI77_09780;Dbxref=NCBI_GP:PDP48173.1;Name=PDP48173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873508.1;locus_tag=CLI77_09780;product=ABC transporter ATP-binding protein;protein_id=PDP48173.1;transl_table=11 NSLS01000048.1 Genbank gene 6018 7772 . - . ID=gene-CLI77_09785;Name=CLI77_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09785 NSLS01000048.1 Protein Homology CDS 6018 7772 . - 0 ID=cds-PDP48174.1;Parent=gene-CLI77_09785;Dbxref=NCBI_GP:PDP48174.1;Name=PDP48174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584470.1;locus_tag=CLI77_09785;product=ABC transporter ATP-binding protein;protein_id=PDP48174.1;transl_table=11 NSLS01000048.1 Genbank gene 7797 9074 . - . ID=gene-CLI77_09790;Name=CLI77_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09790 NSLS01000048.1 Protein Homology CDS 7797 9074 . - 0 ID=cds-PDP48175.1;Parent=gene-CLI77_09790;Dbxref=NCBI_GP:PDP48175.1;Name=PDP48175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815932.1;locus_tag=CLI77_09790;product=hypothetical protein;protein_id=PDP48175.1;transl_table=11 NSLS01000048.1 Genbank gene 9078 9842 . - . ID=gene-CLI77_09795;Name=CLI77_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09795 NSLS01000048.1 Protein Homology CDS 9078 9842 . - 0 ID=cds-PDP48178.1;Parent=gene-CLI77_09795;Dbxref=NCBI_GP:PDP48178.1;Name=PDP48178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965372.1;locus_tag=CLI77_09795;product=outer membrane lipoprotein-sorting protein;protein_id=PDP48178.1;transl_table=11 NSLS01000048.1 Genbank gene 9947 12352 . - . ID=gene-CLI77_09800;Name=CLI77_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09800 NSLS01000048.1 Protein Homology CDS 9947 12352 . - 0 ID=cds-PDP48176.1;Parent=gene-CLI77_09800;Dbxref=NCBI_GP:PDP48176.1;Name=PDP48176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457904.1;locus_tag=CLI77_09800;product=hypothetical protein;protein_id=PDP48176.1;transl_table=11 NSLS01000048.1 Genbank gene 12393 12992 . - . ID=gene-CLI77_09805;Name=CLI77_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09805 NSLS01000048.1 Protein Homology CDS 12393 12992 . - 0 ID=cds-PDP48177.1;Parent=gene-CLI77_09805;Dbxref=NCBI_GP:PDP48177.1;Name=PDP48177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815934.1;locus_tag=CLI77_09805;product=TetR/AcrR family transcriptional regulator;protein_id=PDP48177.1;transl_table=11 ##sequence-region NSLS01000049.1 1 13182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000049.1 Genbank region 1 13182 . + . ID=NSLS01000049.1:1..13182;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000049.1 Genbank gene 272 1003 . - . ID=gene-CLI77_09810;Name=CLI77_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09810 NSLS01000049.1 Protein Homology CDS 272 1003 . - 0 ID=cds-PDP48151.1;Parent=gene-CLI77_09810;Dbxref=NCBI_GP:PDP48151.1;Name=PDP48151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965356.1;locus_tag=CLI77_09810;product=DNA alkylation repair protein;protein_id=PDP48151.1;transl_table=11 NSLS01000049.1 Genbank gene 1018 1779 . - . ID=gene-CLI77_09815;Name=CLI77_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09815 NSLS01000049.1 Protein Homology CDS 1018 1779 . - 0 ID=cds-PDP48152.1;Parent=gene-CLI77_09815;Dbxref=NCBI_GP:PDP48152.1;Name=PDP48152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584577.1;locus_tag=CLI77_09815;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=PDP48152.1;transl_table=11 NSLS01000049.1 Genbank gene 1809 2075 . + . ID=gene-CLI77_09820;Name=CLI77_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09820 NSLS01000049.1 Protein Homology CDS 1809 2075 . + 0 ID=cds-PDP48153.1;Parent=gene-CLI77_09820;Dbxref=NCBI_GP:PDP48153.1;Name=PDP48153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584578.1;locus_tag=CLI77_09820;product=hypothetical protein;protein_id=PDP48153.1;transl_table=11 NSLS01000049.1 Genbank gene 2312 2731 . + . ID=gene-CLI77_09825;Name=CLI77_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09825 NSLS01000049.1 Protein Homology CDS 2312 2731 . + 0 ID=cds-PDP48154.1;Parent=gene-CLI77_09825;Dbxref=NCBI_GP:PDP48154.1;Name=PDP48154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956260.1;locus_tag=CLI77_09825;product=hypothetical protein;protein_id=PDP48154.1;transl_table=11 NSLS01000049.1 Genbank gene 2894 4129 . - . ID=gene-CLI77_09830;Name=CLI77_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09830 NSLS01000049.1 Protein Homology CDS 2894 4129 . - 0 ID=cds-PDP48155.1;Parent=gene-CLI77_09830;Dbxref=NCBI_GP:PDP48155.1;Name=PDP48155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965353.1;locus_tag=CLI77_09830;product=ABC transporter permease;protein_id=PDP48155.1;transl_table=11 NSLS01000049.1 Genbank gene 4142 6151 . - . ID=gene-CLI77_09835;Name=CLI77_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09835 NSLS01000049.1 Protein Homology CDS 4142 6151 . - 0 ID=cds-PDP48156.1;Parent=gene-CLI77_09835;Dbxref=NCBI_GP:PDP48156.1;Name=PDP48156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965352.1;locus_tag=CLI77_09835;product=DNA ligase (NAD(+)) LigA;protein_id=PDP48156.1;transl_table=11 NSLS01000049.1 Genbank gene 6139 6666 . - . ID=gene-CLI77_09840;Name=CLI77_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09840 NSLS01000049.1 Protein Homology CDS 6139 6666 . - 0 ID=cds-PDP48157.1;Parent=gene-CLI77_09840;Dbxref=NCBI_GP:PDP48157.1;Name=PDP48157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874739.1;locus_tag=CLI77_09840;product=N-acetyltransferase;protein_id=PDP48157.1;transl_table=11 NSLS01000049.1 Genbank gene 6673 7296 . - . ID=gene-CLI77_09845;Name=CLI77_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09845 NSLS01000049.1 Protein Homology CDS 6673 7296 . - 0 ID=cds-PDP48158.1;Parent=gene-CLI77_09845;Dbxref=NCBI_GP:PDP48158.1;Name=PDP48158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458238.1;locus_tag=CLI77_09845;product=recombination protein RecR;protein_id=PDP48158.1;transl_table=11 NSLS01000049.1 Genbank gene 7293 8807 . - . ID=gene-CLI77_09850;Name=CLI77_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09850 NSLS01000049.1 Protein Homology CDS 7293 8807 . - 0 ID=cds-PDP48159.1;Parent=gene-CLI77_09850;Dbxref=NCBI_GP:PDP48159.1;Name=PDP48159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815994.1;locus_tag=CLI77_09850;product=ribonuclease E/G;protein_id=PDP48159.1;transl_table=11 NSLS01000049.1 Genbank gene 9128 9406 . - . ID=gene-CLI77_09855;Name=CLI77_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09855 NSLS01000049.1 Protein Homology CDS 9128 9406 . - 0 ID=cds-PDP48160.1;Parent=gene-CLI77_09855;Dbxref=NCBI_GP:PDP48160.1;Name=PDP48160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584585.1;locus_tag=CLI77_09855;product=integration host factor subunit beta;protein_id=PDP48160.1;transl_table=11 NSLS01000049.1 Genbank gene 9518 10009 . - . ID=gene-CLI77_09860;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CLI77_09860 NSLS01000049.1 Protein Homology CDS 9518 10009 . - 0 ID=cds-PDP48161.1;Parent=gene-CLI77_09860;Dbxref=NCBI_GP:PDP48161.1;Name=PDP48161.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965348.1;locus_tag=CLI77_09860;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=PDP48161.1;transl_table=11 NSLS01000049.1 Genbank gene 10042 12438 . - . ID=gene-CLI77_09865;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CLI77_09865 NSLS01000049.1 Protein Homology CDS 10042 12438 . - 0 ID=cds-PDP48162.1;Parent=gene-CLI77_09865;Dbxref=NCBI_GP:PDP48162.1;Name=PDP48162.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815995.1;locus_tag=CLI77_09865;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=PDP48162.1;transl_table=11 NSLS01000049.1 cmsearch riboswitch 12528 12787 . - . ID=id-NSLS01000049.1:12528..12787;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLS01000049.1 Genbank gene 12873 13182 . - . ID=gene-CLI77_09870;Name=CLI77_09870;end_range=13182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09870;partial=true NSLS01000049.1 Protein Homology CDS 12873 13182 . - 1 ID=cds-PDP48163.1;Parent=gene-CLI77_09870;Dbxref=NCBI_GP:PDP48163.1;Name=PDP48163.1;end_range=13182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_09870;partial=true;product=IS982 family transposase;protein_id=PDP48163.1;transl_table=11 ##sequence-region NSLS01000004.1 1 80642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000004.1 Genbank region 1 80642 . + . ID=NSLS01000004.1:1..80642;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000004.1 Genbank pseudogene 29 127 . + . ID=gene-CLI77_02135;Name=CLI77_02135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02135;pseudo=true NSLS01000004.1 Protein Homology CDS 29 127 . + 0 ID=cds-CLI77_02135;Parent=gene-CLI77_02135;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874092.1;locus_tag=CLI77_02135;product=DNA methylase;pseudo=true;transl_table=11 NSLS01000004.1 Genbank gene 830 1069 . + . ID=gene-CLI77_02140;Name=CLI77_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02140 NSLS01000004.1 Protein Homology CDS 830 1069 . + 0 ID=cds-PDP50098.1;Parent=gene-CLI77_02140;Dbxref=NCBI_GP:PDP50098.1;Name=PDP50098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815534.1;locus_tag=CLI77_02140;product=hypothetical protein;protein_id=PDP50098.1;transl_table=11 NSLS01000004.1 Genbank gene 1066 3597 . - . ID=gene-CLI77_02145;Name=CLI77_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02145 NSLS01000004.1 Protein Homology CDS 1066 3597 . - 0 ID=cds-PDP50099.1;Parent=gene-CLI77_02145;Dbxref=NCBI_GP:PDP50099.1;Name=PDP50099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816578.1;locus_tag=CLI77_02145;product=peptidase C10;protein_id=PDP50099.1;transl_table=11 NSLS01000004.1 Genbank gene 3737 4222 . - . ID=gene-CLI77_02150;Name=CLI77_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02150 NSLS01000004.1 Protein Homology CDS 3737 4222 . - 0 ID=cds-PDP50100.1;Parent=gene-CLI77_02150;Dbxref=NCBI_GP:PDP50100.1;Name=PDP50100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873785.1;locus_tag=CLI77_02150;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=PDP50100.1;transl_table=11 NSLS01000004.1 Genbank gene 4314 5000 . - . ID=gene-CLI77_02155;Name=CLI77_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02155 NSLS01000004.1 Protein Homology CDS 4314 5000 . - 0 ID=cds-PDP50101.1;Parent=gene-CLI77_02155;Dbxref=NCBI_GP:PDP50101.1;Name=PDP50101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585427.1;locus_tag=CLI77_02155;product=anaphase-promoting protein;protein_id=PDP50101.1;transl_table=11 NSLS01000004.1 Genbank gene 5186 5869 . - . ID=gene-CLI77_02160;Name=CLI77_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02160 NSLS01000004.1 Protein Homology CDS 5186 5869 . - 0 ID=cds-PDP50102.1;Parent=gene-CLI77_02160;Dbxref=NCBI_GP:PDP50102.1;Name=PDP50102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457866.1;locus_tag=CLI77_02160;product=DNA-binding response regulator;protein_id=PDP50102.1;transl_table=11 NSLS01000004.1 Genbank gene 5882 7690 . - . ID=gene-CLI77_02165;Name=CLI77_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02165 NSLS01000004.1 Protein Homology CDS 5882 7690 . - 0 ID=cds-PDP50165.1;Parent=gene-CLI77_02165;Dbxref=NCBI_GP:PDP50165.1;Name=PDP50165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585425.1;locus_tag=CLI77_02165;product=histidine kinase;protein_id=PDP50165.1;transl_table=11 NSLS01000004.1 Genbank gene 8080 8274 . + . ID=gene-CLI77_02170;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CLI77_02170 NSLS01000004.1 Protein Homology CDS 8080 8274 . + 0 ID=cds-PDP50103.1;Parent=gene-CLI77_02170;Dbxref=NCBI_GP:PDP50103.1;Name=PDP50103.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585424.1;locus_tag=CLI77_02170;product=exodeoxyribonuclease VII small subunit;protein_id=PDP50103.1;transl_table=11 NSLS01000004.1 Genbank gene 8271 8939 . + . ID=gene-CLI77_02175;Name=CLI77_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02175 NSLS01000004.1 Protein Homology CDS 8271 8939 . + 0 ID=cds-PDP50104.1;Parent=gene-CLI77_02175;Dbxref=NCBI_GP:PDP50104.1;Name=PDP50104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585423.1;locus_tag=CLI77_02175;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=PDP50104.1;transl_table=11 NSLS01000004.1 Genbank gene 9168 9244 . + . ID=gene-CLI77_02180;Name=CLI77_02180;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_02180 NSLS01000004.1 tRNAscan-SE tRNA 9168 9244 . + . ID=rna-CLI77_02180;Parent=gene-CLI77_02180;anticodon=(pos:9202..9204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02180;product=tRNA-Asp NSLS01000004.1 tRNAscan-SE exon 9168 9244 . + . ID=exon-CLI77_02180-1;Parent=rna-CLI77_02180;anticodon=(pos:9202..9204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02180;product=tRNA-Asp NSLS01000004.1 Genbank gene 10359 11186 . + . ID=gene-CLI77_02185;Name=CLI77_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02185 NSLS01000004.1 Protein Homology CDS 10359 11186 . + 0 ID=cds-PDP50166.1;Parent=gene-CLI77_02185;Dbxref=NCBI_GP:PDP50166.1;Name=PDP50166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874648.1;locus_tag=CLI77_02185;product=cell division protein FtsX;protein_id=PDP50166.1;transl_table=11 NSLS01000004.1 Genbank gene 11233 11460 . + . ID=gene-CLI77_02190;Name=CLI77_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02190 NSLS01000004.1 Protein Homology CDS 11233 11460 . + 0 ID=cds-PDP50105.1;Parent=gene-CLI77_02190;Dbxref=NCBI_GP:PDP50105.1;Name=PDP50105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815640.1;locus_tag=CLI77_02190;product=DUF3098 domain-containing protein;protein_id=PDP50105.1;transl_table=11 NSLS01000004.1 Genbank gene 11568 12410 . + . ID=gene-CLI77_02195;Name=CLI77_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02195 NSLS01000004.1 Protein Homology CDS 11568 12410 . + 0 ID=cds-PDP50106.1;Parent=gene-CLI77_02195;Dbxref=NCBI_GP:PDP50106.1;Name=PDP50106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457608.1;locus_tag=CLI77_02195;product=undecaprenyl-diphosphate phosphatase;protein_id=PDP50106.1;transl_table=11 NSLS01000004.1 Genbank gene 12420 13196 . + . ID=gene-CLI77_02200;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CLI77_02200 NSLS01000004.1 Protein Homology CDS 12420 13196 . + 0 ID=cds-PDP50107.1;Parent=gene-CLI77_02200;Dbxref=NCBI_GP:PDP50107.1;Name=PDP50107.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585367.1;locus_tag=CLI77_02200;product=tRNA pseudouridine(55) synthase TruB;protein_id=PDP50107.1;transl_table=11 NSLS01000004.1 Genbank gene 13214 14266 . + . ID=gene-CLI77_02205;Name=CLI77_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02205 NSLS01000004.1 Protein Homology CDS 13214 14266 . + 0 ID=cds-PDP50108.1;Parent=gene-CLI77_02205;Dbxref=NCBI_GP:PDP50108.1;Name=PDP50108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815637.1;locus_tag=CLI77_02205;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=PDP50108.1;transl_table=11 NSLS01000004.1 Genbank gene 14269 14712 . + . ID=gene-CLI77_02210;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CLI77_02210 NSLS01000004.1 Protein Homology CDS 14269 14712 . + 0 ID=cds-PDP50109.1;Parent=gene-CLI77_02210;Dbxref=NCBI_GP:PDP50109.1;Name=PDP50109.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585365.1;locus_tag=CLI77_02210;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=PDP50109.1;transl_table=11 NSLS01000004.1 Genbank gene 14725 15969 . + . ID=gene-CLI77_02215;Name=CLI77_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02215 NSLS01000004.1 Protein Homology CDS 14725 15969 . + 0 ID=cds-PDP50110.1;Parent=gene-CLI77_02215;Dbxref=NCBI_GP:PDP50110.1;Name=PDP50110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964435.1;locus_tag=CLI77_02215;product=collagenase-like protease;protein_id=PDP50110.1;transl_table=11 NSLS01000004.1 Genbank gene 16025 16444 . + . ID=gene-CLI77_02220;Name=CLI77_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02220 NSLS01000004.1 Protein Homology CDS 16025 16444 . + 0 ID=cds-PDP50111.1;Parent=gene-CLI77_02220;Dbxref=NCBI_GP:PDP50111.1;Name=PDP50111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585363.1;locus_tag=CLI77_02220;product=thioesterase;protein_id=PDP50111.1;transl_table=11 NSLS01000004.1 Genbank gene 16529 17299 . + . ID=gene-CLI77_02225;Name=CLI77_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02225 NSLS01000004.1 Protein Homology CDS 16529 17299 . + 0 ID=cds-PDP50112.1;Parent=gene-CLI77_02225;Dbxref=NCBI_GP:PDP50112.1;Name=PDP50112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585362.1;locus_tag=CLI77_02225;product=peroxide stress protein YaaA;protein_id=PDP50112.1;transl_table=11 NSLS01000004.1 Genbank gene 17437 18012 . + . ID=gene-CLI77_02230;Name=CLI77_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02230 NSLS01000004.1 Protein Homology CDS 17437 18012 . + 0 ID=cds-PDP50113.1;Parent=gene-CLI77_02230;Dbxref=NCBI_GP:PDP50113.1;Name=PDP50113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585361.1;locus_tag=CLI77_02230;product=superoxide dismutase [Mn/Fe];protein_id=PDP50113.1;transl_table=11 NSLS01000004.1 Genbank gene 18245 18391 . + . ID=gene-CLI77_02235;Name=CLI77_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02235 NSLS01000004.1 Protein Homology CDS 18245 18391 . + 0 ID=cds-PDP50114.1;Parent=gene-CLI77_02235;Dbxref=NCBI_GP:PDP50114.1;Name=PDP50114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI77_02235;product=DUF1661 domain-containing protein;protein_id=PDP50114.1;transl_table=11 NSLS01000004.1 Genbank gene 18557 18633 . + . ID=gene-CLI77_02240;Name=CLI77_02240;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_02240 NSLS01000004.1 tRNAscan-SE tRNA 18557 18633 . + . ID=rna-CLI77_02240;Parent=gene-CLI77_02240;anticodon=(pos:18591..18593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02240;product=tRNA-Arg NSLS01000004.1 tRNAscan-SE exon 18557 18633 . + . ID=exon-CLI77_02240-1;Parent=rna-CLI77_02240;anticodon=(pos:18591..18593);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02240;product=tRNA-Arg NSLS01000004.1 Genbank gene 18826 21300 . + . ID=gene-CLI77_02245;Name=CLI77_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02245 NSLS01000004.1 Protein Homology CDS 18826 21300 . + 0 ID=cds-PDP50115.1;Parent=gene-CLI77_02245;Dbxref=NCBI_GP:PDP50115.1;Name=PDP50115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964858.1;locus_tag=CLI77_02245;product=serine protease;protein_id=PDP50115.1;transl_table=11 NSLS01000004.1 Genbank gene 21784 21963 . - . ID=gene-CLI77_02250;Name=CLI77_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02250 NSLS01000004.1 Protein Homology CDS 21784 21963 . - 0 ID=cds-PDP50116.1;Parent=gene-CLI77_02250;Dbxref=NCBI_GP:PDP50116.1;Name=PDP50116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873904.1;locus_tag=CLI77_02250;product=hypothetical protein;protein_id=PDP50116.1;transl_table=11 NSLS01000004.1 Genbank gene 22149 22799 . + . ID=gene-CLI77_02255;Name=CLI77_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02255 NSLS01000004.1 Protein Homology CDS 22149 22799 . + 0 ID=cds-PDP50117.1;Parent=gene-CLI77_02255;Dbxref=NCBI_GP:PDP50117.1;Name=PDP50117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964857.1;locus_tag=CLI77_02255;product=heme-binding protein HmuY;protein_id=PDP50117.1;transl_table=11 NSLS01000004.1 Genbank gene 22814 24754 . + . ID=gene-CLI77_02260;Name=CLI77_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02260 NSLS01000004.1 Protein Homology CDS 22814 24754 . + 0 ID=cds-PDP50118.1;Parent=gene-CLI77_02260;Dbxref=NCBI_GP:PDP50118.1;Name=PDP50118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874678.1;locus_tag=CLI77_02260;product=TonB-dependent receptor;protein_id=PDP50118.1;transl_table=11 NSLS01000004.1 Genbank gene 24791 29200 . + . ID=gene-CLI77_02265;Name=CLI77_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02265 NSLS01000004.1 Protein Homology CDS 24791 29200 . + 0 ID=cds-PDP50119.1;Parent=gene-CLI77_02265;Dbxref=NCBI_GP:PDP50119.1;Name=PDP50119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815631.1;locus_tag=CLI77_02265;product=cobalt chelatase;protein_id=PDP50119.1;transl_table=11 NSLS01000004.1 Genbank gene 29197 29874 . + . ID=gene-CLI77_02270;Name=CLI77_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02270 NSLS01000004.1 Protein Homology CDS 29197 29874 . + 0 ID=cds-PDP50120.1;Parent=gene-CLI77_02270;Dbxref=NCBI_GP:PDP50120.1;Name=PDP50120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874682.1;locus_tag=CLI77_02270;product=hypothetical protein;protein_id=PDP50120.1;transl_table=11 NSLS01000004.1 Genbank gene 29945 30523 . + . ID=gene-CLI77_02275;Name=CLI77_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02275 NSLS01000004.1 Protein Homology CDS 29945 30523 . + 0 ID=cds-PDP50121.1;Parent=gene-CLI77_02275;Dbxref=NCBI_GP:PDP50121.1;Name=PDP50121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956341.1;locus_tag=CLI77_02275;product=flagellar motor protein MotA;protein_id=PDP50121.1;transl_table=11 NSLS01000004.1 Genbank gene 30529 30855 . + . ID=gene-CLI77_02280;Name=CLI77_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02280 NSLS01000004.1 Protein Homology CDS 30529 30855 . + 0 ID=cds-PDP50122.1;Parent=gene-CLI77_02280;Dbxref=NCBI_GP:PDP50122.1;Name=PDP50122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585349.1;locus_tag=CLI77_02280;product=hypothetical protein;protein_id=PDP50122.1;transl_table=11 NSLS01000004.1 Genbank gene 31313 31507 . + . ID=gene-CLI77_02285;Name=CLI77_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02285 NSLS01000004.1 Protein Homology CDS 31313 31507 . + 0 ID=cds-PDP50123.1;Parent=gene-CLI77_02285;Dbxref=NCBI_GP:PDP50123.1;Name=PDP50123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816302.1;locus_tag=CLI77_02285;product=hypothetical protein;protein_id=PDP50123.1;transl_table=11 NSLS01000004.1 Genbank gene 31790 32878 . - . ID=gene-CLI77_02290;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CLI77_02290 NSLS01000004.1 Protein Homology CDS 31790 32878 . - 0 ID=cds-PDP50124.1;Parent=gene-CLI77_02290;Dbxref=NCBI_GP:PDP50124.1;Name=PDP50124.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874565.1;locus_tag=CLI77_02290;product=aminomethyltransferase;protein_id=PDP50124.1;transl_table=11 NSLS01000004.1 Genbank gene 32953 34017 . - . ID=gene-CLI77_02295;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CLI77_02295 NSLS01000004.1 Protein Homology CDS 32953 34017 . - 0 ID=cds-PDP50125.1;Parent=gene-CLI77_02295;Dbxref=NCBI_GP:PDP50125.1;Name=PDP50125.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584097.1;locus_tag=CLI77_02295;product=dTDP-glucose 4%2C6-dehydratase;protein_id=PDP50125.1;transl_table=11 NSLS01000004.1 Genbank gene 34024 34881 . - . ID=gene-CLI77_02300;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CLI77_02300 NSLS01000004.1 Protein Homology CDS 34024 34881 . - 0 ID=cds-PDP50126.1;Parent=gene-CLI77_02300;Dbxref=NCBI_GP:PDP50126.1;Name=PDP50126.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584096.1;locus_tag=CLI77_02300;product=dTDP-4-dehydrorhamnose reductase;protein_id=PDP50126.1;transl_table=11 NSLS01000004.1 Genbank gene 34878 35468 . - . ID=gene-CLI77_02305;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CLI77_02305 NSLS01000004.1 Protein Homology CDS 34878 35468 . - 0 ID=cds-PDP50127.1;Parent=gene-CLI77_02305;Dbxref=NCBI_GP:PDP50127.1;Name=PDP50127.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457591.1;locus_tag=CLI77_02305;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=PDP50127.1;transl_table=11 NSLS01000004.1 Genbank gene 35483 36352 . - . ID=gene-CLI77_02310;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CLI77_02310 NSLS01000004.1 Protein Homology CDS 35483 36352 . - 0 ID=cds-PDP50128.1;Parent=gene-CLI77_02310;Dbxref=NCBI_GP:PDP50128.1;Name=PDP50128.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584094.1;locus_tag=CLI77_02310;product=glucose-1-phosphate thymidylyltransferase;protein_id=PDP50128.1;transl_table=11 NSLS01000004.1 Genbank gene 36467 38422 . - . ID=gene-CLI77_02315;Name=CLI77_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02315 NSLS01000004.1 Protein Homology CDS 36467 38422 . - 0 ID=cds-PDP50129.1;Parent=gene-CLI77_02315;Dbxref=NCBI_GP:PDP50129.1;Name=PDP50129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584093.1;locus_tag=CLI77_02315;product=sulfatase;protein_id=PDP50129.1;transl_table=11 NSLS01000004.1 Genbank gene 38507 39745 . - . ID=gene-CLI77_02320;Name=CLI77_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02320 NSLS01000004.1 Protein Homology CDS 38507 39745 . - 0 ID=cds-PDP50130.1;Parent=gene-CLI77_02320;Dbxref=NCBI_GP:PDP50130.1;Name=PDP50130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815623.1;locus_tag=CLI77_02320;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=PDP50130.1;transl_table=11 NSLS01000004.1 Genbank gene 39770 41293 . - . ID=gene-CLI77_02325;Name=CLI77_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02325 NSLS01000004.1 Protein Homology CDS 39770 41293 . - 0 ID=cds-PDP50131.1;Parent=gene-CLI77_02325;Dbxref=NCBI_GP:PDP50131.1;Name=PDP50131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457588.1;locus_tag=CLI77_02325;product=glutamate--tRNA ligase;protein_id=PDP50131.1;transl_table=11 NSLS01000004.1 Genbank pseudogene 41613 41815 . + . ID=gene-CLI77_02330;Name=CLI77_02330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02330;pseudo=true NSLS01000004.1 Protein Homology CDS 41613 41815 . + 0 ID=cds-CLI77_02330;Parent=gene-CLI77_02330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584862.1;locus_tag=CLI77_02330;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000004.1 Genbank gene 42444 42827 . - . ID=gene-CLI77_02335;Name=CLI77_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02335 NSLS01000004.1 Protein Homology CDS 42444 42827 . - 0 ID=cds-PDP50132.1;Parent=gene-CLI77_02335;Dbxref=NCBI_GP:PDP50132.1;Name=PDP50132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457586.1;locus_tag=CLI77_02335;product=rhodanese-like domain-containing protein;protein_id=PDP50132.1;transl_table=11 NSLS01000004.1 Genbank gene 42800 44215 . - . ID=gene-CLI77_02340;Name=CLI77_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02340 NSLS01000004.1 Protein Homology CDS 42800 44215 . - 0 ID=cds-PDP50133.1;Parent=gene-CLI77_02340;Dbxref=NCBI_GP:PDP50133.1;Name=PDP50133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457585.1;locus_tag=CLI77_02340;product=MBL fold hydrolase;protein_id=PDP50133.1;transl_table=11 NSLS01000004.1 Genbank gene 44308 45114 . - . ID=gene-CLI77_02345;Name=CLI77_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02345 NSLS01000004.1 Protein Homology CDS 44308 45114 . - 0 ID=cds-PDP50134.1;Parent=gene-CLI77_02345;Dbxref=NCBI_GP:PDP50134.1;Name=PDP50134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457584.1;locus_tag=CLI77_02345;product=sulfite exporter TauE/SafE family protein;protein_id=PDP50134.1;transl_table=11 NSLS01000004.1 Genbank gene 45179 45802 . - . ID=gene-CLI77_02350;Name=CLI77_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02350 NSLS01000004.1 Protein Homology CDS 45179 45802 . - 0 ID=cds-PDP50135.1;Parent=gene-CLI77_02350;Dbxref=NCBI_GP:PDP50135.1;Name=PDP50135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002661599.1;locus_tag=CLI77_02350;product=Crp/Fnr family transcriptional regulator;protein_id=PDP50135.1;transl_table=11 NSLS01000004.1 Genbank gene 46925 48481 . + . ID=gene-CLI77_02355;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CLI77_02355 NSLS01000004.1 Protein Homology CDS 46925 48481 . + 0 ID=cds-PDP50136.1;Parent=gene-CLI77_02355;Dbxref=NCBI_GP:PDP50136.1;Name=PDP50136.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584081.1;locus_tag=CLI77_02355;product=L-aspartate oxidase;protein_id=PDP50136.1;transl_table=11 NSLS01000004.1 Genbank gene 48513 49355 . + . ID=gene-CLI77_02360;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CLI77_02360 NSLS01000004.1 Protein Homology CDS 48513 49355 . + 0 ID=cds-PDP50137.1;Parent=gene-CLI77_02360;Dbxref=NCBI_GP:PDP50137.1;Name=PDP50137.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874560.1;locus_tag=CLI77_02360;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=PDP50137.1;transl_table=11 NSLS01000004.1 Genbank gene 49375 50301 . + . ID=gene-CLI77_02365;Name=CLI77_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02365 NSLS01000004.1 Protein Homology CDS 49375 50301 . + 0 ID=cds-PDP50138.1;Parent=gene-CLI77_02365;Dbxref=NCBI_GP:PDP50138.1;Name=PDP50138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874622.1;locus_tag=CLI77_02365;product=quinolinate synthase NadA;protein_id=PDP50138.1;transl_table=11 NSLS01000004.1 Genbank gene 50401 51396 . + . ID=gene-CLI77_02370;Name=CLI77_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02370 NSLS01000004.1 Protein Homology CDS 50401 51396 . + 0 ID=cds-PDP50139.1;Parent=gene-CLI77_02370;Dbxref=NCBI_GP:PDP50139.1;Name=PDP50139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008761573.1;locus_tag=CLI77_02370;product=MoxR family ATPase;protein_id=PDP50139.1;transl_table=11 NSLS01000004.1 Genbank gene 51407 52279 . + . ID=gene-CLI77_02375;Name=CLI77_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02375 NSLS01000004.1 Protein Homology CDS 51407 52279 . + 0 ID=cds-PDP50140.1;Parent=gene-CLI77_02375;Dbxref=NCBI_GP:PDP50140.1;Name=PDP50140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874688.1;locus_tag=CLI77_02375;product=DUF58 domain-containing protein;protein_id=PDP50140.1;transl_table=11 NSLS01000004.1 Genbank gene 52276 53232 . + . ID=gene-CLI77_02380;Name=CLI77_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02380 NSLS01000004.1 Protein Homology CDS 52276 53232 . + 0 ID=cds-PDP50141.1;Parent=gene-CLI77_02380;Dbxref=NCBI_GP:PDP50141.1;Name=PDP50141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584076.1;locus_tag=CLI77_02380;product=hypothetical protein;protein_id=PDP50141.1;transl_table=11 NSLS01000004.1 Genbank gene 53229 54212 . + . ID=gene-CLI77_02385;Name=CLI77_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02385 NSLS01000004.1 Protein Homology CDS 53229 54212 . + 0 ID=cds-PDP50142.1;Parent=gene-CLI77_02385;Dbxref=NCBI_GP:PDP50142.1;Name=PDP50142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874666.1;locus_tag=CLI77_02385;product=VWA domain-containing protein;protein_id=PDP50142.1;transl_table=11 NSLS01000004.1 Genbank gene 54223 55242 . + . ID=gene-CLI77_02390;Name=CLI77_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02390 NSLS01000004.1 Protein Homology CDS 54223 55242 . + 0 ID=cds-PDP50143.1;Parent=gene-CLI77_02390;Dbxref=NCBI_GP:PDP50143.1;Name=PDP50143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584074.1;locus_tag=CLI77_02390;product=aerotolerance regulator BatB;protein_id=PDP50143.1;transl_table=11 NSLS01000004.1 Genbank gene 55239 55982 . + . ID=gene-CLI77_02395;Name=CLI77_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02395 NSLS01000004.1 Protein Homology CDS 55239 55982 . + 0 ID=cds-PDP50144.1;Parent=gene-CLI77_02395;Dbxref=NCBI_GP:PDP50144.1;Name=PDP50144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874607.1;locus_tag=CLI77_02395;product=hypothetical protein;protein_id=PDP50144.1;transl_table=11 NSLS01000004.1 Genbank gene 56163 57965 . + . ID=gene-CLI77_02400;Name=CLI77_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02400 NSLS01000004.1 Protein Homology CDS 56163 57965 . + 0 ID=cds-PDP50145.1;Parent=gene-CLI77_02400;Dbxref=NCBI_GP:PDP50145.1;Name=PDP50145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457576.1;locus_tag=CLI77_02400;product=aerotolerance regulator BatD;protein_id=PDP50145.1;transl_table=11 NSLS01000004.1 Genbank gene 57962 58870 . + . ID=gene-CLI77_02405;Name=CLI77_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02405 NSLS01000004.1 Protein Homology CDS 57962 58870 . + 0 ID=cds-PDP50146.1;Parent=gene-CLI77_02405;Dbxref=NCBI_GP:PDP50146.1;Name=PDP50146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815608.1;locus_tag=CLI77_02405;product=peptide-binding protein;protein_id=PDP50146.1;transl_table=11 NSLS01000004.1 Genbank gene 58891 59607 . + . ID=gene-CLI77_02410;Name=CLI77_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02410 NSLS01000004.1 Protein Homology CDS 58891 59607 . + 0 ID=cds-PDP50147.1;Parent=gene-CLI77_02410;Dbxref=NCBI_GP:PDP50147.1;Name=PDP50147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584070.1;locus_tag=CLI77_02410;product=phosphatase PAP2 family protein;protein_id=PDP50147.1;transl_table=11 NSLS01000004.1 Genbank gene 59623 60390 . - . ID=gene-CLI77_02415;Name=CLI77_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02415 NSLS01000004.1 Protein Homology CDS 59623 60390 . - 0 ID=cds-PDP50148.1;Parent=gene-CLI77_02415;Dbxref=NCBI_GP:PDP50148.1;Name=PDP50148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584069.1;locus_tag=CLI77_02415;product=TIGR00159 family protein;protein_id=PDP50148.1;transl_table=11 NSLS01000004.1 Genbank gene 60451 61296 . - . ID=gene-CLI77_02420;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CLI77_02420 NSLS01000004.1 Protein Homology CDS 60451 61296 . - 0 ID=cds-PDP50149.1;Parent=gene-CLI77_02420;Dbxref=NCBI_GP:PDP50149.1;Name=PDP50149.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874661.1;locus_tag=CLI77_02420;product=dihydropteroate synthase;protein_id=PDP50149.1;transl_table=11 NSLS01000004.1 Genbank gene 61817 61891 . + . ID=gene-CLI77_02425;Name=CLI77_02425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_02425 NSLS01000004.1 tRNAscan-SE tRNA 61817 61891 . + . ID=rna-CLI77_02425;Parent=gene-CLI77_02425;anticodon=(pos:61849..61851);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02425;product=tRNA-His NSLS01000004.1 tRNAscan-SE exon 61817 61891 . + . ID=exon-CLI77_02425-1;Parent=rna-CLI77_02425;anticodon=(pos:61849..61851);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02425;product=tRNA-His NSLS01000004.1 Genbank gene 62095 64179 . + . ID=gene-CLI77_02430;Name=CLI77_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02430 NSLS01000004.1 Protein Homology CDS 62095 64179 . + 0 ID=cds-PDP50150.1;Parent=gene-CLI77_02430;Dbxref=NCBI_GP:PDP50150.1;Name=PDP50150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815605.1;locus_tag=CLI77_02430;product=hydrolase;protein_id=PDP50150.1;transl_table=11 NSLS01000004.1 Genbank gene 64227 64787 . + . ID=gene-CLI77_02435;Name=CLI77_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02435 NSLS01000004.1 Protein Homology CDS 64227 64787 . + 0 ID=cds-PDP50151.1;Parent=gene-CLI77_02435;Dbxref=NCBI_GP:PDP50151.1;Name=PDP50151.1;Note=catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965187.1;locus_tag=CLI77_02435;product=shikimate kinase;protein_id=PDP50151.1;transl_table=11 NSLS01000004.1 Genbank gene 64726 66261 . - . ID=gene-CLI77_02440;Name=CLI77_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02440 NSLS01000004.1 Protein Homology CDS 64726 66261 . - 0 ID=cds-PDP50152.1;Parent=gene-CLI77_02440;Dbxref=NCBI_GP:PDP50152.1;Name=PDP50152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874617.1;locus_tag=CLI77_02440;product=competence protein ComEC;protein_id=PDP50152.1;transl_table=11 NSLS01000004.1 Genbank gene 66268 66924 . - . ID=gene-CLI77_02445;Name=CLI77_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02445 NSLS01000004.1 Protein Homology CDS 66268 66924 . - 0 ID=cds-PDP50153.1;Parent=gene-CLI77_02445;Dbxref=NCBI_GP:PDP50153.1;Name=PDP50153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584057.1;locus_tag=CLI77_02445;product=ribulose-phosphate 3-epimerase;protein_id=PDP50153.1;transl_table=11 NSLS01000004.1 Genbank gene 67266 70679 . + . ID=gene-CLI77_02450;Name=CLI77_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02450 NSLS01000004.1 Protein Homology CDS 67266 70679 . + 0 ID=cds-PDP50154.1;Parent=gene-CLI77_02450;Dbxref=NCBI_GP:PDP50154.1;Name=PDP50154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874631.1;locus_tag=CLI77_02450;product=isoleucine--tRNA ligase;protein_id=PDP50154.1;transl_table=11 NSLS01000004.1 Genbank gene 70749 71129 . + . ID=gene-CLI77_02455;Name=CLI77_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02455 NSLS01000004.1 Protein Homology CDS 70749 71129 . + 0 ID=cds-PDP50155.1;Parent=gene-CLI77_02455;Dbxref=NCBI_GP:PDP50155.1;Name=PDP50155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842933.1;locus_tag=CLI77_02455;product=molecular chaperone DnaK;protein_id=PDP50155.1;transl_table=11 NSLS01000004.1 Genbank gene 71133 71813 . + . ID=gene-CLI77_02460;Name=CLI77_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02460 NSLS01000004.1 Protein Homology CDS 71133 71813 . + 0 ID=cds-PDP50156.1;Parent=gene-CLI77_02460;Dbxref=NCBI_GP:PDP50156.1;Name=PDP50156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584054.1;locus_tag=CLI77_02460;product=lipoprotein signal peptidase;protein_id=PDP50156.1;transl_table=11 NSLS01000004.1 Genbank gene 71810 72598 . + . ID=gene-CLI77_02465;Name=CLI77_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02465 NSLS01000004.1 Protein Homology CDS 71810 72598 . + 0 ID=cds-PDP50157.1;Parent=gene-CLI77_02465;Dbxref=NCBI_GP:PDP50157.1;Name=PDP50157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815602.1;locus_tag=CLI77_02465;product=DUF4296 domain-containing protein;protein_id=PDP50157.1;transl_table=11 NSLS01000004.1 Genbank gene 72632 73657 . - . ID=gene-CLI77_02470;Name=CLI77_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02470 NSLS01000004.1 Protein Homology CDS 72632 73657 . - 0 ID=cds-PDP50158.1;Parent=gene-CLI77_02470;Dbxref=NCBI_GP:PDP50158.1;Name=PDP50158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965588.1;locus_tag=CLI77_02470;product=acyltransferase;protein_id=PDP50158.1;transl_table=11 NSLS01000004.1 Genbank gene 73692 74465 . - . ID=gene-CLI77_02475;Name=CLI77_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02475 NSLS01000004.1 Protein Homology CDS 73692 74465 . - 0 ID=cds-PDP50159.1;Parent=gene-CLI77_02475;Dbxref=NCBI_GP:PDP50159.1;Name=PDP50159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584051.1;locus_tag=CLI77_02475;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=PDP50159.1;transl_table=11 NSLS01000004.1 Genbank gene 74437 74817 . - . ID=gene-CLI77_02480;Name=CLI77_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02480 NSLS01000004.1 Protein Homology CDS 74437 74817 . - 0 ID=cds-PDP50160.1;Parent=gene-CLI77_02480;Dbxref=NCBI_GP:PDP50160.1;Name=PDP50160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965590.1;locus_tag=CLI77_02480;product=hypothetical protein;protein_id=PDP50160.1;transl_table=11 NSLS01000004.1 Genbank gene 74888 75472 . + . ID=gene-CLI77_02485;Name=CLI77_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02485 NSLS01000004.1 Protein Homology CDS 74888 75472 . + 0 ID=cds-PDP50161.1;Parent=gene-CLI77_02485;Dbxref=NCBI_GP:PDP50161.1;Name=PDP50161.1;Note=hydrolyzes non-standard nucleotides such as xanthine and inosine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965591.1;locus_tag=CLI77_02485;product=non-canonical purine NTP diphosphatase;protein_id=PDP50161.1;transl_table=11 NSLS01000004.1 Genbank gene 75460 77790 . + . ID=gene-CLI77_02490;Name=CLI77_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02490 NSLS01000004.1 Protein Homology CDS 75460 77790 . + 0 ID=cds-PDP50162.1;Parent=gene-CLI77_02490;Dbxref=NCBI_GP:PDP50162.1;Name=PDP50162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956350.1;locus_tag=CLI77_02490;product=hypothetical protein;protein_id=PDP50162.1;transl_table=11 NSLS01000004.1 Genbank gene 77842 79245 . + . ID=gene-CLI77_02495;Name=CLI77_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02495 NSLS01000004.1 Protein Homology CDS 77842 79245 . + 0 ID=cds-PDP50163.1;Parent=gene-CLI77_02495;Dbxref=NCBI_GP:PDP50163.1;Name=PDP50163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457563.1;locus_tag=CLI77_02495;product=aminopeptidase;protein_id=PDP50163.1;transl_table=11 NSLS01000004.1 Genbank pseudogene 79365 79463 . - . ID=gene-CLI77_02500;Name=CLI77_02500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02500;pseudo=true NSLS01000004.1 Protein Homology CDS 79365 79463 . - 0 ID=cds-CLI77_02500;Parent=gene-CLI77_02500;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_02500;product=DNA methylase;pseudo=true;transl_table=11 NSLS01000004.1 Genbank gene 79513 80598 . - . ID=gene-CLI77_02505;Name=CLI77_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02505 NSLS01000004.1 Protein Homology CDS 79513 80598 . - 0 ID=cds-PDP50164.1;Parent=gene-CLI77_02505;Dbxref=NCBI_GP:PDP50164.1;Name=PDP50164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_02505;product=IS5/IS1182 family transposase;protein_id=PDP50164.1;transl_table=11 ##sequence-region NSLS01000050.1 1 12452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000050.1 Genbank region 1 12452 . + . ID=NSLS01000050.1:1..12452;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000050.1 Genbank gene 489 1094 . - . ID=gene-CLI77_09875;Name=CLI77_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09875 NSLS01000050.1 Protein Homology CDS 489 1094 . - 0 ID=cds-PDP48129.1;Parent=gene-CLI77_09875;Dbxref=NCBI_GP:PDP48129.1;Name=PDP48129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02646;locus_tag=CLI77_09875;product=TIGR02646 family protein;protein_id=PDP48129.1;transl_table=11 NSLS01000050.1 Genbank gene 1098 2354 . - . ID=gene-CLI77_09880;Name=CLI77_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09880 NSLS01000050.1 Protein Homology CDS 1098 2354 . - 0 ID=cds-PDP48130.1;Parent=gene-CLI77_09880;Dbxref=NCBI_GP:PDP48130.1;Name=PDP48130.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02463.17;locus_tag=CLI77_09880;product=chromosome segregation protein SMC;protein_id=PDP48130.1;transl_table=11 NSLS01000050.1 Genbank gene 3050 3235 . - . ID=gene-CLI77_09885;Name=CLI77_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09885 NSLS01000050.1 Protein Homology CDS 3050 3235 . - 0 ID=cds-PDP48141.1;Parent=gene-CLI77_09885;Dbxref=NCBI_GP:PDP48141.1;Name=PDP48141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584040.1;locus_tag=CLI77_09885;product=hypothetical protein;protein_id=PDP48141.1;transl_table=11 NSLS01000050.1 Genbank gene 3333 4484 . - . ID=gene-CLI77_09890;Name=CLI77_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09890 NSLS01000050.1 Protein Homology CDS 3333 4484 . - 0 ID=cds-PDP48131.1;Parent=gene-CLI77_09890;Dbxref=NCBI_GP:PDP48131.1;Name=PDP48131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584039.1;locus_tag=CLI77_09890;product=sodium ion-translocating decarboxylase subunit beta;protein_id=PDP48131.1;transl_table=11 NSLS01000050.1 Genbank gene 4489 4923 . - . ID=gene-CLI77_09895;Name=CLI77_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09895 NSLS01000050.1 Protein Homology CDS 4489 4923 . - 0 ID=cds-PDP48132.1;Parent=gene-CLI77_09895;Dbxref=NCBI_GP:PDP48132.1;Name=PDP48132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965432.1;locus_tag=CLI77_09895;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=PDP48132.1;transl_table=11 NSLS01000050.1 Genbank gene 4961 5197 . - . ID=gene-CLI77_09900;Name=CLI77_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09900 NSLS01000050.1 Protein Homology CDS 4961 5197 . - 0 ID=cds-PDP48133.1;Parent=gene-CLI77_09900;Dbxref=NCBI_GP:PDP48133.1;Name=PDP48133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965431.1;locus_tag=CLI77_09900;product=hypothetical protein;protein_id=PDP48133.1;transl_table=11 NSLS01000050.1 Genbank gene 5194 6135 . - . ID=gene-CLI77_09905;Name=CLI77_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09905 NSLS01000050.1 Protein Homology CDS 5194 6135 . - 0 ID=cds-PDP48134.1;Parent=gene-CLI77_09905;Dbxref=NCBI_GP:PDP48134.1;Name=PDP48134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584036.1;locus_tag=CLI77_09905;product=phage tail protein;protein_id=PDP48134.1;transl_table=11 NSLS01000050.1 Genbank gene 6160 7713 . - . ID=gene-CLI77_09910;Name=CLI77_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09910 NSLS01000050.1 Protein Homology CDS 6160 7713 . - 0 ID=cds-PDP48135.1;Parent=gene-CLI77_09910;Dbxref=NCBI_GP:PDP48135.1;Name=PDP48135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100567.1;locus_tag=CLI77_09910;product=methylmalonyl-CoA carboxyltransferase;protein_id=PDP48135.1;transl_table=11 NSLS01000050.1 Genbank gene 7812 8216 . - . ID=gene-CLI77_09915;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=CLI77_09915 NSLS01000050.1 Protein Homology CDS 7812 8216 . - 0 ID=cds-PDP48136.1;Parent=gene-CLI77_09915;Dbxref=NCBI_GP:PDP48136.1;Name=PDP48136.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584034.1;locus_tag=CLI77_09915;product=methylmalonyl-CoA epimerase;protein_id=PDP48136.1;transl_table=11 NSLS01000050.1 Genbank gene 8450 9205 . - . ID=gene-CLI77_09920;Name=CLI77_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09920 NSLS01000050.1 Protein Homology CDS 8450 9205 . - 0 ID=cds-PDP48137.1;Parent=gene-CLI77_09920;Dbxref=NCBI_GP:PDP48137.1;Name=PDP48137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467429.1;locus_tag=CLI77_09920;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=PDP48137.1;transl_table=11 NSLS01000050.1 Genbank gene 9234 11177 . - . ID=gene-CLI77_09925;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CLI77_09925 NSLS01000050.1 Protein Homology CDS 9234 11177 . - 0 ID=cds-PDP48138.1;Parent=gene-CLI77_09925;Dbxref=NCBI_GP:PDP48138.1;Name=PDP48138.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467428.1;locus_tag=CLI77_09925;product=succinate dehydrogenase flavoprotein subunit;protein_id=PDP48138.1;transl_table=11 NSLS01000050.1 Genbank gene 11208 11900 . - . ID=gene-CLI77_09930;Name=CLI77_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09930 NSLS01000050.1 Protein Homology CDS 11208 11900 . - 0 ID=cds-PDP48139.1;Parent=gene-CLI77_09930;Dbxref=NCBI_GP:PDP48139.1;Name=PDP48139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584031.1;locus_tag=CLI77_09930;product=succinate dehydrogenase/fumarate reductase cytochrome b subunit;protein_id=PDP48139.1;transl_table=11 NSLS01000050.1 Genbank gene 11947 12348 . - . ID=gene-CLI77_09935;Name=CLI77_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09935 NSLS01000050.1 Protein Homology CDS 11947 12348 . - 0 ID=cds-PDP48140.1;Parent=gene-CLI77_09935;Dbxref=NCBI_GP:PDP48140.1;Name=PDP48140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815589.1;locus_tag=CLI77_09935;product=hypothetical protein;protein_id=PDP48140.1;transl_table=11 ##sequence-region NSLS01000051.1 1 12319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000051.1 Genbank region 1 12319 . + . ID=NSLS01000051.1:1..12319;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000051.1 Genbank gene 1 628 . + . ID=gene-CLI77_09940;Name=CLI77_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09940;partial=true;start_range=.,1 NSLS01000051.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP48107.1;Parent=gene-CLI77_09940;Dbxref=NCBI_GP:PDP48107.1;Name=PDP48107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_09940;partial=true;product=IS3 family transposase;protein_id=PDP48107.1;start_range=.,1;transl_table=11 NSLS01000051.1 Genbank gene 932 1684 . + . ID=gene-CLI77_09945;Name=CLI77_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09945 NSLS01000051.1 Protein Homology CDS 932 1684 . + 0 ID=cds-PDP48108.1;Parent=gene-CLI77_09945;Dbxref=NCBI_GP:PDP48108.1;Name=PDP48108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874588.1;locus_tag=CLI77_09945;product=hypothetical protein;protein_id=PDP48108.1;transl_table=11 NSLS01000051.1 Genbank gene 1663 2430 . + . ID=gene-CLI77_09950;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CLI77_09950 NSLS01000051.1 Protein Homology CDS 1663 2430 . + 0 ID=cds-PDP48109.1;Parent=gene-CLI77_09950;Dbxref=NCBI_GP:PDP48109.1;Name=PDP48109.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965132.1;locus_tag=CLI77_09950;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=PDP48109.1;transl_table=11 NSLS01000051.1 Genbank gene 2460 3536 . - . ID=gene-CLI77_09955;Name=CLI77_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09955 NSLS01000051.1 Protein Homology CDS 2460 3536 . - 0 ID=cds-PDP48110.1;Parent=gene-CLI77_09955;Dbxref=NCBI_GP:PDP48110.1;Name=PDP48110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457532.1;locus_tag=CLI77_09955;product=peptidase S41;protein_id=PDP48110.1;transl_table=11 NSLS01000051.1 Genbank gene 3529 4476 . - . ID=gene-CLI77_09960;Name=CLI77_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09960 NSLS01000051.1 Protein Homology CDS 3529 4476 . - 0 ID=cds-PDP48111.1;Parent=gene-CLI77_09960;Dbxref=NCBI_GP:PDP48111.1;Name=PDP48111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956355.1;locus_tag=CLI77_09960;product=DUF3316 domain-containing protein;protein_id=PDP48111.1;transl_table=11 NSLS01000051.1 Genbank gene 4463 7159 . - . ID=gene-CLI77_09965;Name=CLI77_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09965 NSLS01000051.1 Protein Homology CDS 4463 7159 . - 0 ID=cds-PDP48112.1;Parent=gene-CLI77_09965;Dbxref=NCBI_GP:PDP48112.1;Name=PDP48112.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584007.1;locus_tag=CLI77_09965;product=DNA topoisomerase IV;protein_id=PDP48112.1;transl_table=11 NSLS01000051.1 Genbank gene 7220 8410 . - . ID=gene-CLI77_09970;Name=CLI77_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09970 NSLS01000051.1 Protein Homology CDS 7220 8410 . - 0 ID=cds-PDP48113.1;Parent=gene-CLI77_09970;Dbxref=NCBI_GP:PDP48113.1;Name=PDP48113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874541.1;locus_tag=CLI77_09970;product=hypothetical protein;protein_id=PDP48113.1;transl_table=11 NSLS01000051.1 Genbank pseudogene 8624 9073 . + . ID=gene-CLI77_09975;Name=CLI77_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_09975;pseudo=true NSLS01000051.1 Protein Homology CDS 8624 9073 . + 0 ID=cds-CLI77_09975;Parent=gene-CLI77_09975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457537.1;locus_tag=CLI77_09975;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000051.1 Genbank gene 9190 10395 . + . ID=gene-CLI77_09980;Name=CLI77_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09980 NSLS01000051.1 Protein Homology CDS 9190 10395 . + 0 ID=cds-PDP48114.1;Parent=gene-CLI77_09980;Dbxref=NCBI_GP:PDP48114.1;Name=PDP48114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815572.1;locus_tag=CLI77_09980;product=hypothetical protein;protein_id=PDP48114.1;transl_table=11 NSLS01000051.1 Genbank gene 10494 12158 . + . ID=gene-CLI77_09985;Name=CLI77_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09985 NSLS01000051.1 Protein Homology CDS 10494 12158 . + 0 ID=cds-PDP48115.1;Parent=gene-CLI77_09985;Dbxref=NCBI_GP:PDP48115.1;Name=PDP48115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584013.1;locus_tag=CLI77_09985;product=transporter;protein_id=PDP48115.1;transl_table=11 ##sequence-region NSLS01000052.1 1 10452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000052.1 Genbank region 1 10452 . + . ID=NSLS01000052.1:1..10452;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000052.1 Genbank gene 47 238 . - . ID=gene-CLI77_09990;Name=CLI77_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09990 NSLS01000052.1 Protein Homology CDS 47 238 . - 0 ID=cds-PDP48087.1;Parent=gene-CLI77_09990;Dbxref=NCBI_GP:PDP48087.1;Name=PDP48087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816082.1;locus_tag=CLI77_09990;product=hypothetical protein;protein_id=PDP48087.1;transl_table=11 NSLS01000052.1 Genbank gene 323 502 . + . ID=gene-CLI77_09995;Name=CLI77_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_09995 NSLS01000052.1 Protein Homology CDS 323 502 . + 0 ID=cds-PDP48088.1;Parent=gene-CLI77_09995;Dbxref=NCBI_GP:PDP48088.1;Name=PDP48088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874713.1;locus_tag=CLI77_09995;product=hypothetical protein;protein_id=PDP48088.1;transl_table=11 NSLS01000052.1 Genbank gene 515 1573 . + . ID=gene-CLI77_10000;Name=CLI77_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10000 NSLS01000052.1 Protein Homology CDS 515 1573 . + 0 ID=cds-PDP48089.1;Parent=gene-CLI77_10000;Dbxref=NCBI_GP:PDP48089.1;Name=PDP48089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458719.1;locus_tag=CLI77_10000;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=PDP48089.1;transl_table=11 NSLS01000052.1 Genbank gene 1664 2719 . + . ID=gene-CLI77_10005;Name=CLI77_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10005 NSLS01000052.1 Protein Homology CDS 1664 2719 . + 0 ID=cds-PDP48090.1;Parent=gene-CLI77_10005;Dbxref=NCBI_GP:PDP48090.1;Name=PDP48090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874706.1;locus_tag=CLI77_10005;product=DUF4837 domain-containing protein;protein_id=PDP48090.1;transl_table=11 NSLS01000052.1 Genbank gene 2763 3860 . + . ID=gene-CLI77_10010;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CLI77_10010 NSLS01000052.1 Protein Homology CDS 2763 3860 . + 0 ID=cds-PDP48091.1;Parent=gene-CLI77_10010;Dbxref=NCBI_GP:PDP48091.1;Name=PDP48091.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585593.1;locus_tag=CLI77_10010;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=PDP48091.1;transl_table=11 NSLS01000052.1 Genbank gene 3882 4340 . + . ID=gene-CLI77_10015;Name=CLI77_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10015 NSLS01000052.1 Protein Homology CDS 3882 4340 . + 0 ID=cds-PDP48092.1;Parent=gene-CLI77_10015;Dbxref=NCBI_GP:PDP48092.1;Name=PDP48092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585592.1;locus_tag=CLI77_10015;product=glycerol-3-phosphate cytidylyltransferase;protein_id=PDP48092.1;transl_table=11 NSLS01000052.1 Genbank gene 4346 5077 . + . ID=gene-CLI77_10020;Name=CLI77_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10020 NSLS01000052.1 Protein Homology CDS 4346 5077 . + 0 ID=cds-PDP48093.1;Parent=gene-CLI77_10020;Dbxref=NCBI_GP:PDP48093.1;Name=PDP48093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585591.1;locus_tag=CLI77_10020;product=NAD(P)-dependent oxidoreductase;protein_id=PDP48093.1;transl_table=11 NSLS01000052.1 Genbank gene 5089 6015 . + . ID=gene-CLI77_10025;Name=CLI77_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10025 NSLS01000052.1 Protein Homology CDS 5089 6015 . + 0 ID=cds-PDP48094.1;Parent=gene-CLI77_10025;Dbxref=NCBI_GP:PDP48094.1;Name=PDP48094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585590.1;locus_tag=CLI77_10025;product=CDP-alcohol phosphatidyltransferase;protein_id=PDP48094.1;transl_table=11 NSLS01000052.1 Genbank gene 6060 6920 . + . ID=gene-CLI77_10030;Name=CLI77_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10030 NSLS01000052.1 Protein Homology CDS 6060 6920 . + 0 ID=cds-PDP48095.1;Parent=gene-CLI77_10030;Dbxref=NCBI_GP:PDP48095.1;Name=PDP48095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874711.1;locus_tag=CLI77_10030;product=hypothetical protein;protein_id=PDP48095.1;transl_table=11 NSLS01000052.1 Genbank gene 6917 10141 . + . ID=gene-CLI77_10035;Name=CLI77_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10035 NSLS01000052.1 Protein Homology CDS 6917 10141 . + 0 ID=cds-PDP48096.1;Parent=gene-CLI77_10035;Dbxref=NCBI_GP:PDP48096.1;Name=PDP48096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585588.1;locus_tag=CLI77_10035;product=DNA helicase UvrD;protein_id=PDP48096.1;transl_table=11 NSLS01000052.1 Genbank gene 10344 10452 . - . ID=gene-CLI77_10040;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI77_10040 NSLS01000052.1 cmsearch rRNA 10344 10452 . - . ID=rna-CLI77_10040;Parent=gene-CLI77_10040;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_10040;product=5S ribosomal RNA NSLS01000052.1 cmsearch exon 10344 10452 . - . ID=exon-CLI77_10040-1;Parent=rna-CLI77_10040;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_10040;product=5S ribosomal RNA ##sequence-region NSLS01000053.1 1 9692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000053.1 Genbank region 1 9692 . + . ID=NSLS01000053.1:1..9692;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000053.1 Genbank gene 962 2350 . + . ID=gene-CLI77_10045;Name=CLI77_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10045 NSLS01000053.1 Protein Homology CDS 962 2350 . + 0 ID=cds-PDP48072.1;Parent=gene-CLI77_10045;Dbxref=NCBI_GP:PDP48072.1;Name=PDP48072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585079.1;locus_tag=CLI77_10045;product=transporter;protein_id=PDP48072.1;transl_table=11 NSLS01000053.1 Genbank gene 2386 3447 . + . ID=gene-CLI77_10050;Name=CLI77_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10050 NSLS01000053.1 Protein Homology CDS 2386 3447 . + 0 ID=cds-PDP48073.1;Parent=gene-CLI77_10050;Dbxref=NCBI_GP:PDP48073.1;Name=PDP48073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585080.1;locus_tag=CLI77_10050;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP48073.1;transl_table=11 NSLS01000053.1 Genbank gene 3444 6593 . + . ID=gene-CLI77_10055;Name=CLI77_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10055 NSLS01000053.1 Protein Homology CDS 3444 6593 . + 0 ID=cds-PDP48074.1;Parent=gene-CLI77_10055;Dbxref=NCBI_GP:PDP48074.1;Name=PDP48074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458263.1;locus_tag=CLI77_10055;product=AcrB/AcrD/AcrF family protein;protein_id=PDP48074.1;transl_table=11 NSLS01000053.1 Genbank gene 6578 6877 . + . ID=gene-CLI77_10060;Name=CLI77_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10060 NSLS01000053.1 Protein Homology CDS 6578 6877 . + 0 ID=cds-PDP48075.1;Parent=gene-CLI77_10060;Dbxref=NCBI_GP:PDP48075.1;Name=PDP48075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585082.1;locus_tag=CLI77_10060;product=hypothetical protein;protein_id=PDP48075.1;transl_table=11 NSLS01000053.1 Genbank pseudogene 6910 7164 . + . ID=gene-CLI77_10065;Name=CLI77_10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10065;pseudo=true NSLS01000053.1 Protein Homology CDS 6910 7164 . + 0 ID=cds-CLI77_10065;Parent=gene-CLI77_10065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585360.1;locus_tag=CLI77_10065;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000053.1 Genbank pseudogene 7148 7713 . - . ID=gene-CLI77_10070;Name=CLI77_10070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10070;pseudo=true NSLS01000053.1 Protein Homology CDS 7148 7713 . - 0 ID=cds-CLI77_10070;Parent=gene-CLI77_10070;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847497.1;locus_tag=CLI77_10070;product=glutamine amidotransferase;pseudo=true;transl_table=11 NSLS01000053.1 Genbank pseudogene 7721 8214 . - . ID=gene-CLI77_10075;Name=CLI77_10075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10075;pseudo=true NSLS01000053.1 Protein Homology CDS 7721 8214 . - 0 ID=cds-CLI77_10075;Parent=gene-CLI77_10075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226317.1;locus_tag=CLI77_10075;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000053.1 Genbank gene 8232 9101 . - . ID=gene-CLI77_10080;Name=CLI77_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10080 NSLS01000053.1 Protein Homology CDS 8232 9101 . - 0 ID=cds-PDP48076.1;Parent=gene-CLI77_10080;Dbxref=NCBI_GP:PDP48076.1;Name=PDP48076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015546407.1;locus_tag=CLI77_10080;product=DNA damage-inducible protein D;protein_id=PDP48076.1;transl_table=11 NSLS01000053.1 Genbank gene 9188 9664 . - . ID=gene-CLI77_10085;Name=CLI77_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10085 NSLS01000053.1 Protein Homology CDS 9188 9664 . - 0 ID=cds-PDP48077.1;Parent=gene-CLI77_10085;Dbxref=NCBI_GP:PDP48077.1;Name=PDP48077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_10085;product=hypothetical protein;protein_id=PDP48077.1;transl_table=11 ##sequence-region NSLS01000054.1 1 9515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000054.1 Genbank region 1 9515 . + . ID=NSLS01000054.1:1..9515;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000054.1 Genbank gene 535 1320 . + . ID=gene-CLI77_10090;Name=CLI77_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10090 NSLS01000054.1 Protein Homology CDS 535 1320 . + 0 ID=cds-PDP48054.1;Parent=gene-CLI77_10090;Dbxref=NCBI_GP:PDP48054.1;Name=PDP48054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874257.1;locus_tag=CLI77_10090;product=formate transporter;protein_id=PDP48054.1;transl_table=11 NSLS01000054.1 Genbank gene 1415 3223 . - . ID=gene-CLI77_10095;Name=CLI77_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10095 NSLS01000054.1 Protein Homology CDS 1415 3223 . - 0 ID=cds-PDP48055.1;Parent=gene-CLI77_10095;Dbxref=NCBI_GP:PDP48055.1;Name=PDP48055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457419.1;locus_tag=CLI77_10095;product=precorrin-6x reductase;protein_id=PDP48055.1;transl_table=11 NSLS01000054.1 Genbank gene 3220 5064 . - . ID=gene-CLI77_10100;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=CLI77_10100 NSLS01000054.1 Protein Homology CDS 3220 5064 . - 0 ID=cds-PDP48056.1;Parent=gene-CLI77_10100;Dbxref=NCBI_GP:PDP48056.1;Name=PDP48056.1;gbkey=CDS;gene=cobM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874261.1;locus_tag=CLI77_10100;product=precorrin-4 C(11)-methyltransferase;protein_id=PDP48056.1;transl_table=11 NSLS01000054.1 Genbank pseudogene 5069 5607 . - . ID=gene-CLI77_10105;Name=CLI77_10105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10105;pseudo=true NSLS01000054.1 Protein Homology CDS 5069 5607 . - 0 ID=cds-CLI77_10105;Parent=gene-CLI77_10105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815446.1;locus_tag=CLI77_10105;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000054.1 Genbank gene 5641 5859 . - . ID=gene-CLI77_10110;Name=CLI77_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10110 NSLS01000054.1 Protein Homology CDS 5641 5859 . - 0 ID=cds-PDP48057.1;Parent=gene-CLI77_10110;Dbxref=NCBI_GP:PDP48057.1;Name=PDP48057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583855.1;locus_tag=CLI77_10110;product=hypothetical protein;protein_id=PDP48057.1;transl_table=11 NSLS01000054.1 Genbank gene 5856 7097 . - . ID=gene-CLI77_10115;Name=CLI77_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10115 NSLS01000054.1 Protein Homology CDS 5856 7097 . - 0 ID=cds-PDP48058.1;Parent=gene-CLI77_10115;Dbxref=NCBI_GP:PDP48058.1;Name=PDP48058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815448.1;locus_tag=CLI77_10115;product=cobalamin biosynthesis bifunctional protein CbiET;protein_id=PDP48058.1;transl_table=11 NSLS01000054.1 Genbank gene 7090 8496 . - . ID=gene-CLI77_10120;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=CLI77_10120 NSLS01000054.1 Protein Homology CDS 7090 8496 . - 0 ID=cds-PDP48059.1;Parent=gene-CLI77_10120;Dbxref=NCBI_GP:PDP48059.1;Name=PDP48059.1;gbkey=CDS;gene=cobJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099801.1;locus_tag=CLI77_10120;product=precorrin-3B C(17)-methyltransferase;protein_id=PDP48059.1;transl_table=11 NSLS01000054.1 Genbank gene 8888 9515 . - . ID=gene-CLI77_10125;Name=CLI77_10125;end_range=9515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10125;partial=true NSLS01000054.1 Protein Homology CDS 8888 9515 . - 1 ID=cds-PDP48060.1;Parent=gene-CLI77_10125;Dbxref=NCBI_GP:PDP48060.1;Name=PDP48060.1;end_range=9515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10125;partial=true;product=IS3 family transposase;protein_id=PDP48060.1;transl_table=11 ##sequence-region NSLS01000055.1 1 9439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000055.1 Genbank region 1 9439 . + . ID=NSLS01000055.1:1..9439;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000055.1 Genbank gene 353 706 . + . ID=gene-CLI77_10130;Name=CLI77_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10130 NSLS01000055.1 Protein Homology CDS 353 706 . + 0 ID=cds-PDP48040.1;Parent=gene-CLI77_10130;Dbxref=NCBI_GP:PDP48040.1;Name=PDP48040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583949.1;locus_tag=CLI77_10130;product=septum formation initiator;protein_id=PDP48040.1;transl_table=11 NSLS01000055.1 Genbank gene 727 1089 . + . ID=gene-CLI77_10135;Name=CLI77_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10135 NSLS01000055.1 Protein Homology CDS 727 1089 . + 0 ID=cds-PDP48041.1;Parent=gene-CLI77_10135;Dbxref=NCBI_GP:PDP48041.1;Name=PDP48041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583950.1;locus_tag=CLI77_10135;product=hypothetical protein;protein_id=PDP48041.1;transl_table=11 NSLS01000055.1 Genbank gene 1109 2083 . + . ID=gene-CLI77_10140;Name=CLI77_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10140 NSLS01000055.1 Protein Homology CDS 1109 2083 . + 0 ID=cds-PDP48042.1;Parent=gene-CLI77_10140;Dbxref=NCBI_GP:PDP48042.1;Name=PDP48042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583951.1;locus_tag=CLI77_10140;product=RNA pseudouridine synthase;protein_id=PDP48042.1;transl_table=11 NSLS01000055.1 Genbank gene 2119 4167 . + . ID=gene-CLI77_10145;Name=CLI77_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10145 NSLS01000055.1 Protein Homology CDS 2119 4167 . + 0 ID=cds-PDP48043.1;Parent=gene-CLI77_10145;Dbxref=NCBI_GP:PDP48043.1;Name=PDP48043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815524.1;locus_tag=CLI77_10145;product=thiol:disulfide interchange protein;protein_id=PDP48043.1;transl_table=11 NSLS01000055.1 Genbank gene 4185 4970 . + . ID=gene-CLI77_10150;Name=CLI77_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10150 NSLS01000055.1 Protein Homology CDS 4185 4970 . + 0 ID=cds-PDP48044.1;Parent=gene-CLI77_10150;Dbxref=NCBI_GP:PDP48044.1;Name=PDP48044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583953.1;locus_tag=CLI77_10150;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=PDP48044.1;transl_table=11 NSLS01000055.1 Genbank gene 5028 6992 . + . ID=gene-CLI77_10155;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CLI77_10155 NSLS01000055.1 Protein Homology CDS 5028 6992 . + 0 ID=cds-PDP48045.1;Parent=gene-CLI77_10155;Dbxref=NCBI_GP:PDP48045.1;Name=PDP48045.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779230.1;locus_tag=CLI77_10155;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=PDP48045.1;transl_table=11 NSLS01000055.1 Genbank gene 6985 8793 . + . ID=gene-CLI77_10160;Name=CLI77_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10160 NSLS01000055.1 Protein Homology CDS 6985 8793 . + 0 ID=cds-PDP48046.1;Parent=gene-CLI77_10160;Dbxref=NCBI_GP:PDP48046.1;Name=PDP48046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815525.1;locus_tag=CLI77_10160;product=fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase;protein_id=PDP48046.1;transl_table=11 ##sequence-region NSLS01000056.1 1 8557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000056.1 Genbank region 1 8557 . + . ID=NSLS01000056.1:1..8557;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000056.1 Genbank gene 234 1187 . - . ID=gene-CLI77_10165;Name=CLI77_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10165 NSLS01000056.1 Protein Homology CDS 234 1187 . - 0 ID=cds-PDP47882.1;Parent=gene-CLI77_10165;Dbxref=NCBI_GP:PDP47882.1;Name=PDP47882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965549.1;locus_tag=CLI77_10165;product=glycerate dehydrogenase;protein_id=PDP47882.1;transl_table=11 NSLS01000056.1 Genbank gene 1427 3307 . - . ID=gene-CLI77_10170;Name=CLI77_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10170 NSLS01000056.1 Protein Homology CDS 1427 3307 . - 0 ID=cds-PDP47883.1;Parent=gene-CLI77_10170;Dbxref=NCBI_GP:PDP47883.1;Name=PDP47883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815941.1;locus_tag=CLI77_10170;product=hypothetical protein;protein_id=PDP47883.1;transl_table=11 NSLS01000056.1 Genbank pseudogene 3567 3722 . + . ID=gene-CLI77_10175;Name=CLI77_10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10175;pseudo=true NSLS01000056.1 Protein Homology CDS 3567 3722 . + 0 ID=cds-CLI77_10175;Parent=gene-CLI77_10175;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874214.1;locus_tag=CLI77_10175;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLS01000056.1 Genbank gene 4232 5623 . + . ID=gene-CLI77_10180;Name=CLI77_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10180 NSLS01000056.1 Protein Homology CDS 4232 5623 . + 0 ID=cds-PDP47884.1;Parent=gene-CLI77_10180;Dbxref=NCBI_GP:PDP47884.1;Name=PDP47884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584475.1;locus_tag=CLI77_10180;product=lipase;protein_id=PDP47884.1;transl_table=11 NSLS01000056.1 Genbank gene 5628 6434 . + . ID=gene-CLI77_10185;Name=CLI77_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10185 NSLS01000056.1 Protein Homology CDS 5628 6434 . + 0 ID=cds-PDP47885.1;Parent=gene-CLI77_10185;Dbxref=NCBI_GP:PDP47885.1;Name=PDP47885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584474.1;locus_tag=CLI77_10185;product=lipase;protein_id=PDP47885.1;transl_table=11 NSLS01000056.1 Genbank gene 6473 7990 . + . ID=gene-CLI77_10190;Name=CLI77_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10190 NSLS01000056.1 Protein Homology CDS 6473 7990 . + 0 ID=cds-PDP47886.1;Parent=gene-CLI77_10190;Dbxref=NCBI_GP:PDP47886.1;Name=PDP47886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964407.1;locus_tag=CLI77_10190;product=membrane-bound O-acyltransferase family protein;protein_id=PDP47886.1;transl_table=11 ##sequence-region NSLS01000057.1 1 7031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000057.1 Genbank region 1 7031 . + . ID=NSLS01000057.1:1..7031;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000057.1 Genbank gene 342 1043 . - . ID=gene-CLI77_10195;Name=CLI77_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10195 NSLS01000057.1 Protein Homology CDS 342 1043 . - 0 ID=cds-PDP47869.1;Parent=gene-CLI77_10195;Dbxref=NCBI_GP:PDP47869.1;Name=PDP47869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457501.1;locus_tag=CLI77_10195;product=ATP-binding protein;protein_id=PDP47869.1;transl_table=11 NSLS01000057.1 Genbank gene 1078 2472 . - . ID=gene-CLI77_10200;Name=CLI77_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10200 NSLS01000057.1 Protein Homology CDS 1078 2472 . - 0 ID=cds-PDP47874.1;Parent=gene-CLI77_10200;Dbxref=NCBI_GP:PDP47874.1;Name=PDP47874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956369.1;locus_tag=CLI77_10200;product=hypothetical protein;protein_id=PDP47874.1;transl_table=11 NSLS01000057.1 Genbank gene 2669 3925 . - . ID=gene-CLI77_10205;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CLI77_10205 NSLS01000057.1 Protein Homology CDS 2669 3925 . - 0 ID=cds-PDP47870.1;Parent=gene-CLI77_10205;Dbxref=NCBI_GP:PDP47870.1;Name=PDP47870.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457503.1;locus_tag=CLI77_10205;product=phosphoglycerate kinase;protein_id=PDP47870.1;transl_table=11 NSLS01000057.1 Genbank gene 4222 5829 . + . ID=gene-CLI77_10210;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CLI77_10210 NSLS01000057.1 Protein Homology CDS 4222 5829 . + 0 ID=cds-PDP47871.1;Parent=gene-CLI77_10210;Dbxref=NCBI_GP:PDP47871.1;Name=PDP47871.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015546495.1;locus_tag=CLI77_10210;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=PDP47871.1;transl_table=11 NSLS01000057.1 Genbank gene 6022 6234 . - . ID=gene-CLI77_10215;Name=CLI77_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10215 NSLS01000057.1 Protein Homology CDS 6022 6234 . - 0 ID=cds-PDP47872.1;Parent=gene-CLI77_10215;Dbxref=NCBI_GP:PDP47872.1;Name=PDP47872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873488.1;locus_tag=CLI77_10215;product=hypothetical protein;protein_id=PDP47872.1;transl_table=11 NSLS01000057.1 Genbank gene 6234 6596 . - . ID=gene-CLI77_10220;Name=CLI77_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10220 NSLS01000057.1 Protein Homology CDS 6234 6596 . - 0 ID=cds-PDP47873.1;Parent=gene-CLI77_10220;Dbxref=NCBI_GP:PDP47873.1;Name=PDP47873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873489.1;locus_tag=CLI77_10220;product=hypothetical protein;protein_id=PDP47873.1;transl_table=11 NSLS01000057.1 Genbank pseudogene 6805 7014 . - . ID=gene-CLI77_10225;Name=CLI77_10225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10225;pseudo=true NSLS01000057.1 Protein Homology CDS 6805 7014 . - 0 ID=cds-CLI77_10225;Parent=gene-CLI77_10225;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815999.1;locus_tag=CLI77_10225;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000058.1 1 6842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000058.1 Genbank region 1 6842 . + . ID=NSLS01000058.1:1..6842;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000058.1 Genbank gene 1 2338 . - . ID=gene-CLI77_10230;Name=CLI77_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10230;partial=true;start_range=.,1 NSLS01000058.1 Protein Homology CDS 1 2338 . - 0 ID=cds-PDP47773.1;Parent=gene-CLI77_10230;Dbxref=NCBI_GP:PDP47773.1;Name=PDP47773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI77_10230;partial=true;product=peptidase C25;protein_id=PDP47773.1;start_range=.,1;transl_table=11 NSLS01000058.1 Genbank gene 2781 3800 . - . ID=gene-CLI77_10235;Name=CLI77_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10235 NSLS01000058.1 Protein Homology CDS 2781 3800 . - 0 ID=cds-PDP47770.1;Parent=gene-CLI77_10235;Dbxref=NCBI_GP:PDP47770.1;Name=PDP47770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966132.1;locus_tag=CLI77_10235;product=GNAT family N-acetyltransferase;protein_id=PDP47770.1;transl_table=11 NSLS01000058.1 Genbank gene 3781 4704 . - . ID=gene-CLI77_10240;Name=CLI77_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10240 NSLS01000058.1 Protein Homology CDS 3781 4704 . - 0 ID=cds-PDP47771.1;Parent=gene-CLI77_10240;Dbxref=NCBI_GP:PDP47771.1;Name=PDP47771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458490.1;locus_tag=CLI77_10240;product=DUF2156 domain-containing protein;protein_id=PDP47771.1;transl_table=11 NSLS01000058.1 Genbank pseudogene 4799 4936 . - . ID=gene-CLI77_10245;Name=CLI77_10245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10245;pseudo=true NSLS01000058.1 Protein Homology CDS 4799 4936 . - 0 ID=cds-CLI77_10245;Parent=gene-CLI77_10245;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966134.1;locus_tag=CLI77_10245;product=metalloprotease;pseudo=true;transl_table=11 NSLS01000058.1 Genbank gene 5563 6842 . - . ID=gene-CLI77_10250;Name=CLI77_10250;end_range=6842,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10250;partial=true NSLS01000058.1 Protein Homology CDS 5563 6842 . - 2 ID=cds-PDP47772.1;Parent=gene-CLI77_10250;Dbxref=NCBI_GP:PDP47772.1;Name=PDP47772.1;end_range=6842,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_10250;partial=true;product=hemagglutinin;protein_id=PDP47772.1;transl_table=11 ##sequence-region NSLS01000059.1 1 5971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000059.1 Genbank region 1 5971 . + . ID=NSLS01000059.1:1..5971;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000059.1 Genbank gene 19 129 . - . ID=gene-CLI77_10255;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI77_10255 NSLS01000059.1 cmsearch rRNA 19 129 . - . ID=rna-CLI77_10255;Parent=gene-CLI77_10255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_10255;product=5S ribosomal RNA NSLS01000059.1 cmsearch exon 19 129 . - . ID=exon-CLI77_10255-1;Parent=rna-CLI77_10255;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_10255;product=5S ribosomal RNA NSLS01000059.1 Genbank gene 220 3120 . - . ID=gene-CLI77_10260;Name=CLI77_10260;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI77_10260 NSLS01000059.1 Genbank rRNA 220 3120 . - . ID=rna-CLI77_10260;Parent=gene-CLI77_10260;gbkey=rRNA;locus_tag=CLI77_10260;product=23S ribosomal RNA NSLS01000059.1 Genbank exon 220 3120 . - . ID=exon-CLI77_10260-1;Parent=rna-CLI77_10260;gbkey=rRNA;locus_tag=CLI77_10260;product=23S ribosomal RNA NSLS01000059.1 Genbank gene 3231 3307 . - . ID=gene-CLI77_10265;Name=CLI77_10265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_10265 NSLS01000059.1 tRNAscan-SE tRNA 3231 3307 . - . ID=rna-CLI77_10265;Parent=gene-CLI77_10265;anticodon=(pos:complement(3271..3273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_10265;product=tRNA-Ala NSLS01000059.1 tRNAscan-SE exon 3231 3307 . - . ID=exon-CLI77_10265-1;Parent=rna-CLI77_10265;anticodon=(pos:complement(3271..3273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_10265;product=tRNA-Ala NSLS01000059.1 Genbank gene 3309 3382 . - . ID=gene-CLI77_10270;Name=CLI77_10270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_10270 NSLS01000059.1 tRNAscan-SE tRNA 3309 3382 . - . ID=rna-CLI77_10270;Parent=gene-CLI77_10270;anticodon=(pos:complement(3346..3348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_10270;product=tRNA-Ile NSLS01000059.1 tRNAscan-SE exon 3309 3382 . - . ID=exon-CLI77_10270-1;Parent=rna-CLI77_10270;anticodon=(pos:complement(3346..3348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_10270;product=tRNA-Ile NSLS01000059.1 Genbank gene 3886 5427 . - . ID=gene-CLI77_10275;Name=CLI77_10275;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI77_10275 NSLS01000059.1 Genbank rRNA 3886 5427 . - . ID=rna-CLI77_10275;Parent=gene-CLI77_10275;gbkey=rRNA;locus_tag=CLI77_10275;product=16S ribosomal RNA NSLS01000059.1 Genbank exon 3886 5427 . - . ID=exon-CLI77_10275-1;Parent=rna-CLI77_10275;gbkey=rRNA;locus_tag=CLI77_10275;product=16S ribosomal RNA NSLS01000059.1 Genbank pseudogene 5756 5971 . + . ID=gene-CLI77_10280;Name=CLI77_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10280;pseudo=true NSLS01000059.1 Protein Homology CDS 5756 5971 . + 0 ID=cds-CLI77_10280;Parent=gene-CLI77_10280;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457334.1;locus_tag=CLI77_10280;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000005.1 1 54210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000005.1 Genbank region 1 54210 . + . ID=NSLS01000005.1:1..54210;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000005.1 Genbank gene 45 1130 . + . ID=gene-CLI77_02510;Name=CLI77_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02510 NSLS01000005.1 Protein Homology CDS 45 1130 . + 0 ID=cds-PDP50025.1;Parent=gene-CLI77_02510;Dbxref=NCBI_GP:PDP50025.1;Name=PDP50025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_02510;product=IS5/IS1182 family transposase;protein_id=PDP50025.1;transl_table=11 NSLS01000005.1 Genbank gene 1379 1852 . - . ID=gene-CLI77_02515;Name=CLI77_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02515 NSLS01000005.1 Protein Homology CDS 1379 1852 . - 0 ID=cds-PDP50026.1;Parent=gene-CLI77_02515;Dbxref=NCBI_GP:PDP50026.1;Name=PDP50026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875012.1;locus_tag=CLI77_02515;product=histidinol phosphate phosphatase;protein_id=PDP50026.1;transl_table=11 NSLS01000005.1 Genbank gene 2089 2376 . - . ID=gene-CLI77_02520;Name=CLI77_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02520 NSLS01000005.1 Protein Homology CDS 2089 2376 . - 0 ID=cds-PDP50027.1;Parent=gene-CLI77_02520;Dbxref=NCBI_GP:PDP50027.1;Name=PDP50027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585029.1;locus_tag=CLI77_02520;product=DNA-binding protein;protein_id=PDP50027.1;transl_table=11 NSLS01000005.1 Genbank gene 2481 2681 . + . ID=gene-CLI77_02525;Name=CLI77_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02525 NSLS01000005.1 GeneMarkS+ CDS 2481 2681 . + 0 ID=cds-PDP50028.1;Parent=gene-CLI77_02525;Dbxref=NCBI_GP:PDP50028.1;Name=PDP50028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_02525;product=hypothetical protein;protein_id=PDP50028.1;transl_table=11 NSLS01000005.1 Genbank gene 2674 3855 . + . ID=gene-CLI77_02530;Name=CLI77_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02530 NSLS01000005.1 Protein Homology CDS 2674 3855 . + 0 ID=cds-PDP50029.1;Parent=gene-CLI77_02530;Dbxref=NCBI_GP:PDP50029.1;Name=PDP50029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585089.1;locus_tag=CLI77_02530;product=AAA family ATPase;protein_id=PDP50029.1;transl_table=11 NSLS01000005.1 Genbank gene 4044 7625 . + . ID=gene-CLI77_02535;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CLI77_02535 NSLS01000005.1 Protein Homology CDS 4044 7625 . + 0 ID=cds-PDP50030.1;Parent=gene-CLI77_02535;Dbxref=NCBI_GP:PDP50030.1;Name=PDP50030.1;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873434.1;locus_tag=CLI77_02535;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=PDP50030.1;transl_table=11 NSLS01000005.1 Genbank gene 9186 12275 . + . ID=gene-CLI77_02540;Name=CLI77_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02540 NSLS01000005.1 Protein Homology CDS 9186 12275 . + 0 ID=cds-PDP50031.1;Parent=gene-CLI77_02540;Dbxref=NCBI_GP:PDP50031.1;Name=PDP50031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00149.26;locus_tag=CLI77_02540;product=hypothetical protein;protein_id=PDP50031.1;transl_table=11 NSLS01000005.1 Genbank gene 12356 13162 . - . ID=gene-CLI77_02545;Name=CLI77_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02545 NSLS01000005.1 Protein Homology CDS 12356 13162 . - 0 ID=cds-PDP50032.1;Parent=gene-CLI77_02545;Dbxref=NCBI_GP:PDP50032.1;Name=PDP50032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359018.1;locus_tag=CLI77_02545;product=hypothetical protein;protein_id=PDP50032.1;transl_table=11 NSLS01000005.1 Genbank gene 13735 15522 . + . ID=gene-CLI77_02550;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CLI77_02550 NSLS01000005.1 Protein Homology CDS 13735 15522 . + 0 ID=cds-PDP50033.1;Parent=gene-CLI77_02550;Dbxref=NCBI_GP:PDP50033.1;Name=PDP50033.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956096.1;locus_tag=CLI77_02550;product=signal peptide peptidase SppA;protein_id=PDP50033.1;transl_table=11 NSLS01000005.1 Genbank gene 15552 16625 . + . ID=gene-CLI77_02555;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CLI77_02555 NSLS01000005.1 Protein Homology CDS 15552 16625 . + 0 ID=cds-PDP50034.1;Parent=gene-CLI77_02555;Dbxref=NCBI_GP:PDP50034.1;Name=PDP50034.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585188.1;locus_tag=CLI77_02555;product=tetraacyldisaccharide 4'-kinase;protein_id=PDP50034.1;transl_table=11 NSLS01000005.1 Genbank gene 16631 17671 . + . ID=gene-CLI77_02560;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CLI77_02560 NSLS01000005.1 Protein Homology CDS 16631 17671 . + 0 ID=cds-PDP50035.1;Parent=gene-CLI77_02560;Dbxref=NCBI_GP:PDP50035.1;Name=PDP50035.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965038.1;locus_tag=CLI77_02560;product=thiamine-phosphate kinase;protein_id=PDP50035.1;transl_table=11 NSLS01000005.1 Genbank gene 17664 19028 . + . ID=gene-CLI77_02565;Name=CLI77_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02565 NSLS01000005.1 Protein Homology CDS 17664 19028 . + 0 ID=cds-PDP50036.1;Parent=gene-CLI77_02565;Dbxref=NCBI_GP:PDP50036.1;Name=PDP50036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585186.1;locus_tag=CLI77_02565;product=MATE family efflux transporter;protein_id=PDP50036.1;transl_table=11 NSLS01000005.1 Genbank gene 19025 19897 . + . ID=gene-CLI77_02570;Name=CLI77_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02570 NSLS01000005.1 Protein Homology CDS 19025 19897 . + 0 ID=cds-PDP50037.1;Parent=gene-CLI77_02570;Dbxref=NCBI_GP:PDP50037.1;Name=PDP50037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816375.1;locus_tag=CLI77_02570;product=50S ribosomal protein L11 methyltransferase;protein_id=PDP50037.1;transl_table=11 NSLS01000005.1 Genbank gene 19997 20542 . - . ID=gene-CLI77_02575;Name=CLI77_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02575 NSLS01000005.1 Protein Homology CDS 19997 20542 . - 0 ID=cds-PDP50038.1;Parent=gene-CLI77_02575;Dbxref=NCBI_GP:PDP50038.1;Name=PDP50038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585184.1;locus_tag=CLI77_02575;product=DJ-1 family protein;protein_id=PDP50038.1;transl_table=11 NSLS01000005.1 Genbank gene 20557 21384 . - . ID=gene-CLI77_02580;Name=CLI77_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02580 NSLS01000005.1 Protein Homology CDS 20557 21384 . - 0 ID=cds-PDP50039.1;Parent=gene-CLI77_02580;Dbxref=NCBI_GP:PDP50039.1;Name=PDP50039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585183.1;locus_tag=CLI77_02580;product=energy transducer TonB;protein_id=PDP50039.1;transl_table=11 NSLS01000005.1 Genbank gene 21389 21808 . - . ID=gene-CLI77_02585;Name=CLI77_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02585 NSLS01000005.1 Protein Homology CDS 21389 21808 . - 0 ID=cds-PDP50040.1;Parent=gene-CLI77_02585;Dbxref=NCBI_GP:PDP50040.1;Name=PDP50040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956094.1;locus_tag=CLI77_02585;product=biopolymer transporter ExbD;protein_id=PDP50040.1;transl_table=11 NSLS01000005.1 Genbank gene 21805 22539 . - . ID=gene-CLI77_02590;Name=CLI77_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02590 NSLS01000005.1 Protein Homology CDS 21805 22539 . - 0 ID=cds-PDP50041.1;Parent=gene-CLI77_02590;Dbxref=NCBI_GP:PDP50041.1;Name=PDP50041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874528.1;locus_tag=CLI77_02590;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP50041.1;transl_table=11 NSLS01000005.1 Genbank gene 22577 23293 . - . ID=gene-CLI77_02595;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CLI77_02595 NSLS01000005.1 Protein Homology CDS 22577 23293 . - 0 ID=cds-PDP50042.1;Parent=gene-CLI77_02595;Dbxref=NCBI_GP:PDP50042.1;Name=PDP50042.1;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457687.1;locus_tag=CLI77_02595;product=pyridoxine 5'-phosphate synthase;protein_id=PDP50042.1;transl_table=11 NSLS01000005.1 Genbank gene 23371 24237 . + . ID=gene-CLI77_02600;Name=CLI77_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02600 NSLS01000005.1 Protein Homology CDS 23371 24237 . + 0 ID=cds-PDP50043.1;Parent=gene-CLI77_02600;Dbxref=NCBI_GP:PDP50043.1;Name=PDP50043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965045.1;locus_tag=CLI77_02600;product=NAD kinase;protein_id=PDP50043.1;transl_table=11 NSLS01000005.1 Genbank gene 24296 25051 . + . ID=gene-CLI77_02605;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CLI77_02605 NSLS01000005.1 Protein Homology CDS 24296 25051 . + 0 ID=cds-PDP50044.1;Parent=gene-CLI77_02605;Dbxref=NCBI_GP:PDP50044.1;Name=PDP50044.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956092.1;locus_tag=CLI77_02605;product=LPS export ABC transporter ATP-binding protein;protein_id=PDP50044.1;transl_table=11 NSLS01000005.1 Genbank gene 25300 25593 . + . ID=gene-CLI77_02610;Name=CLI77_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02610 NSLS01000005.1 Protein Homology CDS 25300 25593 . + 0 ID=cds-PDP50045.1;Parent=gene-CLI77_02610;Dbxref=NCBI_GP:PDP50045.1;Name=PDP50045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965046.1;locus_tag=CLI77_02610;product=RNA-binding protein;protein_id=PDP50045.1;transl_table=11 NSLS01000005.1 Genbank gene 25761 25985 . - . ID=gene-CLI77_02615;Name=CLI77_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02615 NSLS01000005.1 Protein Homology CDS 25761 25985 . - 0 ID=cds-PDP50046.1;Parent=gene-CLI77_02615;Dbxref=NCBI_GP:PDP50046.1;Name=PDP50046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816478.1;locus_tag=CLI77_02615;product=hypothetical protein;protein_id=PDP50046.1;transl_table=11 NSLS01000005.1 Genbank gene 26133 26330 . - . ID=gene-CLI77_02620;Name=CLI77_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02620 NSLS01000005.1 Protein Homology CDS 26133 26330 . - 0 ID=cds-PDP50071.1;Parent=gene-CLI77_02620;Dbxref=NCBI_GP:PDP50071.1;Name=PDP50071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815891.1;locus_tag=CLI77_02620;product=hypothetical protein;protein_id=PDP50071.1;transl_table=11 NSLS01000005.1 Genbank gene 26557 27423 . - . ID=gene-CLI77_02625;Name=CLI77_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02625 NSLS01000005.1 Protein Homology CDS 26557 27423 . - 0 ID=cds-PDP50047.1;Parent=gene-CLI77_02625;Dbxref=NCBI_GP:PDP50047.1;Name=PDP50047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874512.1;locus_tag=CLI77_02625;product=T9SS C-terminal target domain-containing protein;protein_id=PDP50047.1;transl_table=11 NSLS01000005.1 Genbank gene 27653 28234 . - . ID=gene-CLI77_02630;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CLI77_02630 NSLS01000005.1 Protein Homology CDS 27653 28234 . - 0 ID=cds-PDP50048.1;Parent=gene-CLI77_02630;Dbxref=NCBI_GP:PDP50048.1;Name=PDP50048.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585175.1;locus_tag=CLI77_02630;product=GTP cyclohydrolase I FolE;protein_id=PDP50048.1;transl_table=11 NSLS01000005.1 Genbank gene 28238 28744 . - . ID=gene-CLI77_02635;Name=CLI77_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02635 NSLS01000005.1 Protein Homology CDS 28238 28744 . - 0 ID=cds-PDP50049.1;Parent=gene-CLI77_02635;Dbxref=NCBI_GP:PDP50049.1;Name=PDP50049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585174.1;locus_tag=CLI77_02635;product=SPOR domain-containing protein;protein_id=PDP50049.1;transl_table=11 NSLS01000005.1 Genbank gene 28806 29561 . - . ID=gene-CLI77_02640;Name=CLI77_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02640 NSLS01000005.1 Protein Homology CDS 28806 29561 . - 0 ID=cds-PDP50050.1;Parent=gene-CLI77_02640;Dbxref=NCBI_GP:PDP50050.1;Name=PDP50050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457684.1;locus_tag=CLI77_02640;product=triose-phosphate isomerase;protein_id=PDP50050.1;transl_table=11 NSLS01000005.1 Genbank gene 29593 30885 . - . ID=gene-CLI77_02645;Name=CLI77_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02645 NSLS01000005.1 Protein Homology CDS 29593 30885 . - 0 ID=cds-PDP50051.1;Parent=gene-CLI77_02645;Dbxref=NCBI_GP:PDP50051.1;Name=PDP50051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816368.1;locus_tag=CLI77_02645;product=DoxX family protein;protein_id=PDP50051.1;transl_table=11 NSLS01000005.1 Genbank gene 30882 31430 . - . ID=gene-CLI77_02650;Name=CLI77_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02650 NSLS01000005.1 Protein Homology CDS 30882 31430 . - 0 ID=cds-PDP50052.1;Parent=gene-CLI77_02650;Dbxref=NCBI_GP:PDP50052.1;Name=PDP50052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585171.1;locus_tag=CLI77_02650;product=hypothetical protein;protein_id=PDP50052.1;transl_table=11 NSLS01000005.1 Genbank gene 31427 33964 . - . ID=gene-CLI77_02655;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CLI77_02655 NSLS01000005.1 Protein Homology CDS 31427 33964 . - 0 ID=cds-PDP50053.1;Parent=gene-CLI77_02655;Dbxref=NCBI_GP:PDP50053.1;Name=PDP50053.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457682.1;locus_tag=CLI77_02655;product=endopeptidase La;protein_id=PDP50053.1;transl_table=11 NSLS01000005.1 Genbank pseudogene 34172 35719 . - . ID=gene-CLI77_02660;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=pseudogene;locus_tag=CLI77_02660;pseudo=true NSLS01000005.1 Protein Homology CDS 34172 35719 . - 0 ID=cds-CLI77_02660;Parent=gene-CLI77_02660;Note=internal stop;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585169.1;locus_tag=CLI77_02660;product=alkyl hydroperoxide reductase subunit F;pseudo=true;transl_table=11 NSLS01000005.1 Genbank gene 35885 36451 . - . ID=gene-CLI77_02665;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CLI77_02665 NSLS01000005.1 Protein Homology CDS 35885 36451 . - 0 ID=cds-PDP50054.1;Parent=gene-CLI77_02665;Dbxref=NCBI_GP:PDP50054.1;Name=PDP50054.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585168.1;locus_tag=CLI77_02665;product=peroxiredoxin;protein_id=PDP50054.1;transl_table=11 NSLS01000005.1 Genbank pseudogene 36465 36763 . - . ID=gene-CLI77_02670;Name=CLI77_02670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02670;pseudo=true NSLS01000005.1 Protein Homology CDS 36465 36763 . - 0 ID=cds-CLI77_02670;Parent=gene-CLI77_02670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956090.1;locus_tag=CLI77_02670;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000005.1 Genbank gene 36854 37888 . - . ID=gene-CLI77_02675;Name=CLI77_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02675 NSLS01000005.1 Protein Homology CDS 36854 37888 . - 0 ID=cds-PDP50055.1;Parent=gene-CLI77_02675;Dbxref=NCBI_GP:PDP50055.1;Name=PDP50055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585167.1;locus_tag=CLI77_02675;product=thioredoxin;protein_id=PDP50055.1;transl_table=11 NSLS01000005.1 Genbank gene 37991 39790 . - . ID=gene-CLI77_02680;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CLI77_02680 NSLS01000005.1 Protein Homology CDS 37991 39790 . - 0 ID=cds-PDP50072.1;Parent=gene-CLI77_02680;Dbxref=NCBI_GP:PDP50072.1;Name=PDP50072.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147086.1;locus_tag=CLI77_02680;product=translational GTPase TypA;protein_id=PDP50072.1;transl_table=11 NSLS01000005.1 Genbank gene 39997 40923 . - . ID=gene-CLI77_02685;Name=CLI77_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02685 NSLS01000005.1 Protein Homology CDS 39997 40923 . - 0 ID=cds-PDP50056.1;Parent=gene-CLI77_02685;Dbxref=NCBI_GP:PDP50056.1;Name=PDP50056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457679.1;locus_tag=CLI77_02685;product=hypothetical protein;protein_id=PDP50056.1;transl_table=11 NSLS01000005.1 Genbank gene 40931 41626 . - . ID=gene-CLI77_02690;Name=CLI77_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02690 NSLS01000005.1 Protein Homology CDS 40931 41626 . - 0 ID=cds-PDP50057.1;Parent=gene-CLI77_02690;Dbxref=NCBI_GP:PDP50057.1;Name=PDP50057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965180.1;locus_tag=CLI77_02690;product=hypothetical protein;protein_id=PDP50057.1;transl_table=11 NSLS01000005.1 Genbank gene 41633 41854 . - . ID=gene-CLI77_02695;Name=CLI77_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02695 NSLS01000005.1 Protein Homology CDS 41633 41854 . - 0 ID=cds-PDP50058.1;Parent=gene-CLI77_02695;Dbxref=NCBI_GP:PDP50058.1;Name=PDP50058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457677.1;locus_tag=CLI77_02695;product=hypothetical protein;protein_id=PDP50058.1;transl_table=11 NSLS01000005.1 Genbank gene 41851 42783 . - . ID=gene-CLI77_02700;Name=CLI77_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02700 NSLS01000005.1 Protein Homology CDS 41851 42783 . - 0 ID=cds-PDP50059.1;Parent=gene-CLI77_02700;Dbxref=NCBI_GP:PDP50059.1;Name=PDP50059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965178.1;locus_tag=CLI77_02700;product=hypothetical protein;protein_id=PDP50059.1;transl_table=11 NSLS01000005.1 Genbank pseudogene 42840 43192 . + . ID=gene-CLI77_02705;Name=CLI77_02705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02705;pseudo=true NSLS01000005.1 Protein Homology CDS 42840 43192 . + 0 ID=cds-CLI77_02705;Parent=gene-CLI77_02705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956085.1;locus_tag=CLI77_02705;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000005.1 Genbank gene 43891 44385 . - . ID=gene-CLI77_02710;Name=CLI77_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02710 NSLS01000005.1 Protein Homology CDS 43891 44385 . - 0 ID=cds-PDP50060.1;Parent=gene-CLI77_02710;Dbxref=NCBI_GP:PDP50060.1;Name=PDP50060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874526.1;locus_tag=CLI77_02710;product=hypothetical protein;protein_id=PDP50060.1;transl_table=11 NSLS01000005.1 Genbank gene 44382 44648 . - . ID=gene-CLI77_02715;Name=CLI77_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02715 NSLS01000005.1 GeneMarkS+ CDS 44382 44648 . - 0 ID=cds-PDP50061.1;Parent=gene-CLI77_02715;Dbxref=NCBI_GP:PDP50061.1;Name=PDP50061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_02715;product=hypothetical protein;protein_id=PDP50061.1;transl_table=11 NSLS01000005.1 Genbank gene 44647 45690 . + . ID=gene-CLI77_02720;Name=CLI77_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02720 NSLS01000005.1 Protein Homology CDS 44647 45690 . + 0 ID=cds-PDP50062.1;Parent=gene-CLI77_02720;Dbxref=NCBI_GP:PDP50062.1;Name=PDP50062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874533.1;locus_tag=CLI77_02720;product=endonuclease;protein_id=PDP50062.1;transl_table=11 NSLS01000005.1 Genbank gene 45674 46543 . - . ID=gene-CLI77_02725;Name=CLI77_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02725 NSLS01000005.1 Protein Homology CDS 45674 46543 . - 0 ID=cds-PDP50063.1;Parent=gene-CLI77_02725;Dbxref=NCBI_GP:PDP50063.1;Name=PDP50063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585140.1;locus_tag=CLI77_02725;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=PDP50063.1;transl_table=11 NSLS01000005.1 Genbank gene 46540 47235 . - . ID=gene-CLI77_02730;Name=CLI77_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02730 NSLS01000005.1 Protein Homology CDS 46540 47235 . - 0 ID=cds-PDP50064.1;Parent=gene-CLI77_02730;Dbxref=NCBI_GP:PDP50064.1;Name=PDP50064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956080.1;locus_tag=CLI77_02730;product=cytidylate kinase;protein_id=PDP50064.1;transl_table=11 NSLS01000005.1 Genbank gene 47265 48305 . - . ID=gene-CLI77_02735;Name=CLI77_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02735 NSLS01000005.1 Protein Homology CDS 47265 48305 . - 0 ID=cds-PDP50065.1;Parent=gene-CLI77_02735;Dbxref=NCBI_GP:PDP50065.1;Name=PDP50065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956079.1;locus_tag=CLI77_02735;product=hypothetical protein;protein_id=PDP50065.1;transl_table=11 NSLS01000005.1 Genbank pseudogene 48330 48541 . + . ID=gene-CLI77_02740;Name=CLI77_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02740;pseudo=true NSLS01000005.1 Protein Homology CDS 48330 48541 . + 0 ID=cds-CLI77_02740;Parent=gene-CLI77_02740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816655.1;locus_tag=CLI77_02740;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000005.1 Genbank gene 48947 50164 . - . ID=gene-CLI77_02745;Name=CLI77_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02745 NSLS01000005.1 Protein Homology CDS 48947 50164 . - 0 ID=cds-PDP50073.1;Parent=gene-CLI77_02745;Dbxref=NCBI_GP:PDP50073.1;Name=PDP50073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097877.1;locus_tag=CLI77_02745;product=riboflavin biosynthesis protein RibBA;protein_id=PDP50073.1;transl_table=11 NSLS01000005.1 Genbank gene 50167 52122 . - . ID=gene-CLI77_02750;Name=CLI77_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02750 NSLS01000005.1 Protein Homology CDS 50167 52122 . - 0 ID=cds-PDP50066.1;Parent=gene-CLI77_02750;Dbxref=NCBI_GP:PDP50066.1;Name=PDP50066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816346.1;locus_tag=CLI77_02750;product=permease;protein_id=PDP50066.1;transl_table=11 NSLS01000005.1 Genbank gene 52398 52937 . - . ID=gene-CLI77_02755;Name=CLI77_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02755 NSLS01000005.1 Protein Homology CDS 52398 52937 . - 0 ID=cds-PDP50067.1;Parent=gene-CLI77_02755;Dbxref=NCBI_GP:PDP50067.1;Name=PDP50067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816345.1;locus_tag=CLI77_02755;product=50S ribosomal protein L9;protein_id=PDP50067.1;transl_table=11 NSLS01000005.1 Genbank gene 52962 53234 . - . ID=gene-CLI77_02760;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CLI77_02760 NSLS01000005.1 Protein Homology CDS 52962 53234 . - 0 ID=cds-PDP50068.1;Parent=gene-CLI77_02760;Dbxref=NCBI_GP:PDP50068.1;Name=PDP50068.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018108318.1;locus_tag=CLI77_02760;product=30S ribosomal protein S18;protein_id=PDP50068.1;transl_table=11 NSLS01000005.1 Genbank gene 53238 53591 . - . ID=gene-CLI77_02765;Name=CLI77_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02765 NSLS01000005.1 Protein Homology CDS 53238 53591 . - 0 ID=cds-PDP50069.1;Parent=gene-CLI77_02765;Dbxref=NCBI_GP:PDP50069.1;Name=PDP50069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585132.1;locus_tag=CLI77_02765;product=30S ribosomal protein S6;protein_id=PDP50069.1;transl_table=11 NSLS01000005.1 Genbank gene 53688 54210 . - . ID=gene-CLI77_02770;Name=CLI77_02770;end_range=54210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02770;partial=true NSLS01000005.1 Protein Homology CDS 53688 54210 . - 1 ID=cds-PDP50070.1;Parent=gene-CLI77_02770;Dbxref=NCBI_GP:PDP50070.1;Name=PDP50070.1;end_range=54210,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008625412.1;locus_tag=CLI77_02770;partial=true;product=RNA polymerase subunit sigma;protein_id=PDP50070.1;transl_table=11 ##sequence-region NSLS01000060.1 1 5092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000060.1 Genbank region 1 5092 . + . ID=NSLS01000060.1:1..5092;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000060.1 Genbank gene 3 470 . + . ID=gene-CLI77_10285;Name=CLI77_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10285 NSLS01000060.1 Protein Homology CDS 3 470 . + 0 ID=cds-PDP47741.1;Parent=gene-CLI77_10285;Dbxref=NCBI_GP:PDP47741.1;Name=PDP47741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583867.1;locus_tag=CLI77_10285;product=histidinol phosphate aminotransferase;protein_id=PDP47741.1;transl_table=11 NSLS01000060.1 Genbank gene 549 770 . + . ID=gene-CLI77_10290;Name=CLI77_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10290 NSLS01000060.1 Protein Homology CDS 549 770 . + 0 ID=cds-PDP47742.1;Parent=gene-CLI77_10290;Dbxref=NCBI_GP:PDP47742.1;Name=PDP47742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874256.1;locus_tag=CLI77_10290;product=hypothetical protein;protein_id=PDP47742.1;transl_table=11 NSLS01000060.1 Genbank gene 1381 2238 . - . ID=gene-CLI77_10295;Name=CLI77_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10295 NSLS01000060.1 Protein Homology CDS 1381 2238 . - 0 ID=cds-PDP47743.1;Parent=gene-CLI77_10295;Dbxref=NCBI_GP:PDP47743.1;Name=PDP47743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965083.1;locus_tag=CLI77_10295;product=hypothetical protein;protein_id=PDP47743.1;transl_table=11 NSLS01000060.1 Genbank gene 2252 3145 . - . ID=gene-CLI77_10300;Name=CLI77_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10300 NSLS01000060.1 Protein Homology CDS 2252 3145 . - 0 ID=cds-PDP47744.1;Parent=gene-CLI77_10300;Dbxref=NCBI_GP:PDP47744.1;Name=PDP47744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955954.1;locus_tag=CLI77_10300;product=hypothetical protein;protein_id=PDP47744.1;transl_table=11 NSLS01000060.1 Genbank gene 3179 3631 . - . ID=gene-CLI77_10305;Name=CLI77_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10305 NSLS01000060.1 Protein Homology CDS 3179 3631 . - 0 ID=cds-PDP47745.1;Parent=gene-CLI77_10305;Dbxref=NCBI_GP:PDP47745.1;Name=PDP47745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874251.1;locus_tag=CLI77_10305;product=DUF4252 domain-containing protein;protein_id=PDP47745.1;transl_table=11 NSLS01000060.1 Genbank gene 3687 4175 . - . ID=gene-CLI77_10310;Name=CLI77_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10310 NSLS01000060.1 Protein Homology CDS 3687 4175 . - 0 ID=cds-PDP47746.1;Parent=gene-CLI77_10310;Dbxref=NCBI_GP:PDP47746.1;Name=PDP47746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583859.1;locus_tag=CLI77_10310;product=hypothetical protein;protein_id=PDP47746.1;transl_table=11 NSLS01000060.1 Genbank gene 4172 4672 . - . ID=gene-CLI77_10315;Name=CLI77_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10315 NSLS01000060.1 Protein Homology CDS 4172 4672 . - 0 ID=cds-PDP47747.1;Parent=gene-CLI77_10315;Dbxref=NCBI_GP:PDP47747.1;Name=PDP47747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583858.1;locus_tag=CLI77_10315;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP47747.1;transl_table=11 ##sequence-region NSLS01000061.1 1 4801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000061.1 Genbank region 1 4801 . + . ID=NSLS01000061.1:1..4801;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000061.1 Genbank gene 1 107 . - . ID=gene-CLI77_10320;Name=CLI77_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10320;partial=true;start_range=.,1 NSLS01000061.1 Protein Homology CDS 1 107 . - 0 ID=cds-PDP47640.1;Parent=gene-CLI77_10320;Dbxref=NCBI_GP:PDP47640.1;Name=PDP47640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004330866.1;locus_tag=CLI77_10320;partial=true;product=elongation factor P;protein_id=PDP47640.1;start_range=.,1;transl_table=11 NSLS01000061.1 Genbank gene 311 505 . - . ID=gene-CLI77_10325;Name=CLI77_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10325 NSLS01000061.1 GeneMarkS+ CDS 311 505 . - 0 ID=cds-PDP47641.1;Parent=gene-CLI77_10325;Dbxref=NCBI_GP:PDP47641.1;Name=PDP47641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10325;product=hypothetical protein;protein_id=PDP47641.1;transl_table=11 NSLS01000061.1 Genbank gene 557 1786 . + . ID=gene-CLI77_10330;Name=rocD;gbkey=Gene;gene=rocD;gene_biotype=protein_coding;locus_tag=CLI77_10330 NSLS01000061.1 Protein Homology CDS 557 1786 . + 0 ID=cds-PDP47642.1;Parent=gene-CLI77_10330;Dbxref=NCBI_GP:PDP47642.1;Name=PDP47642.1;gbkey=CDS;gene=rocD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875102.1;locus_tag=CLI77_10330;product=ornithine--oxo-acid transaminase;protein_id=PDP47642.1;transl_table=11 NSLS01000061.1 Genbank gene 1793 2722 . + . ID=gene-CLI77_10335;Name=CLI77_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10335 NSLS01000061.1 Protein Homology CDS 1793 2722 . + 0 ID=cds-PDP47643.1;Parent=gene-CLI77_10335;Dbxref=NCBI_GP:PDP47643.1;Name=PDP47643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816701.1;locus_tag=CLI77_10335;product=amidinotransferase;protein_id=PDP47643.1;transl_table=11 NSLS01000061.1 Genbank gene 2799 4430 . + . ID=gene-CLI77_10340;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CLI77_10340 NSLS01000061.1 Protein Homology CDS 2799 4430 . + 0 ID=cds-PDP47644.1;Parent=gene-CLI77_10340;Dbxref=NCBI_GP:PDP47644.1;Name=PDP47644.1;gbkey=CDS;gene=pruA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585586.1;locus_tag=CLI77_10340;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=PDP47644.1;transl_table=11 NSLS01000061.1 Genbank gene 4577 4801 . - . ID=gene-CLI77_10345;Name=CLI77_10345;end_range=4801,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10345;partial=true NSLS01000061.1 Protein Homology CDS 4577 4801 . - 0 ID=cds-PDP47645.1;Parent=gene-CLI77_10345;Dbxref=NCBI_GP:PDP47645.1;Name=PDP47645.1;end_range=4801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457507.1;locus_tag=CLI77_10345;partial=true;product=hypothetical protein;protein_id=PDP47645.1;transl_table=11 ##sequence-region NSLS01000062.1 1 4721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000062.1 Genbank region 1 4721 . + . ID=NSLS01000062.1:1..4721;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000062.1 Genbank gene 379 2049 . + . ID=gene-CLI77_10350;Name=CLI77_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10350 NSLS01000062.1 Protein Homology CDS 379 2049 . + 0 ID=cds-PDP47626.1;Parent=gene-CLI77_10350;Dbxref=NCBI_GP:PDP47626.1;Name=PDP47626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816581.1;locus_tag=CLI77_10350;product=peptidylarginine deiminase;protein_id=PDP47626.1;transl_table=11 NSLS01000062.1 Genbank gene 2095 2292 . + . ID=gene-CLI77_10355;Name=CLI77_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10355 NSLS01000062.1 Protein Homology CDS 2095 2292 . + 0 ID=cds-PDP47627.1;Parent=gene-CLI77_10355;Dbxref=NCBI_GP:PDP47627.1;Name=PDP47627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956310.1;locus_tag=CLI77_10355;product=hypothetical protein;protein_id=PDP47627.1;transl_table=11 NSLS01000062.1 Genbank gene 2271 3803 . + . ID=gene-CLI77_10360;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CLI77_10360 NSLS01000062.1 Protein Homology CDS 2271 3803 . + 0 ID=cds-PDP47628.1;Parent=gene-CLI77_10360;Dbxref=NCBI_GP:PDP47628.1;Name=PDP47628.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585431.1;locus_tag=CLI77_10360;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=PDP47628.1;transl_table=11 NSLS01000062.1 Genbank gene 4139 4309 . + . ID=gene-CLI77_10365;Name=CLI77_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10365 NSLS01000062.1 Protein Homology CDS 4139 4309 . + 0 ID=cds-PDP47629.1;Parent=gene-CLI77_10365;Dbxref=NCBI_GP:PDP47629.1;Name=PDP47629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005810660.1;locus_tag=CLI77_10365;product=4Fe-4S ferredoxin;protein_id=PDP47629.1;transl_table=11 ##sequence-region NSLS01000063.1 1 4198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000063.1 Genbank region 1 4198 . + . ID=NSLS01000063.1:1..4198;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000063.1 Genbank gene 1 3526 . - . ID=gene-CLI77_10370;Name=CLI77_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10370;partial=true;start_range=.,1 NSLS01000063.1 Protein Homology CDS 1 3526 . - 0 ID=cds-PDP47531.1;Parent=gene-CLI77_10370;Dbxref=NCBI_GP:PDP47531.1;Name=PDP47531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956476.1;locus_tag=CLI77_10370;partial=true;product=peptidase C25;protein_id=PDP47531.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000064.1 1 3847 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000064.1 Genbank region 1 3847 . + . ID=NSLS01000064.1:1..3847;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000064.1 Genbank gene 33 245 . + . ID=gene-CLI77_10375;Name=CLI77_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10375 NSLS01000064.1 Protein Homology CDS 33 245 . + 0 ID=cds-PDP47520.1;Parent=gene-CLI77_10375;Dbxref=NCBI_GP:PDP47520.1;Name=PDP47520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874614.1;locus_tag=CLI77_10375;product=hypothetical protein;protein_id=PDP47520.1;transl_table=11 NSLS01000064.1 Genbank gene 342 1058 . + . ID=gene-CLI77_10380;Name=CLI77_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10380 NSLS01000064.1 Protein Homology CDS 342 1058 . + 0 ID=cds-PDP47521.1;Parent=gene-CLI77_10380;Dbxref=NCBI_GP:PDP47521.1;Name=PDP47521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457816.1;locus_tag=CLI77_10380;product=GLPGLI family protein;protein_id=PDP47521.1;transl_table=11 NSLS01000064.1 Genbank gene 1075 3750 . + . ID=gene-CLI77_10385;Name=CLI77_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10385 NSLS01000064.1 Protein Homology CDS 1075 3750 . + 0 ID=cds-PDP47522.1;Parent=gene-CLI77_10385;Dbxref=NCBI_GP:PDP47522.1;Name=PDP47522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585028.1;locus_tag=CLI77_10385;product=hypothetical protein;protein_id=PDP47522.1;transl_table=11 ##sequence-region NSLS01000065.1 1 3115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000065.1 Genbank region 1 3115 . + . ID=NSLS01000065.1:1..3115;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000065.1 Genbank gene 1 135 . - . ID=gene-CLI77_10390;Name=CLI77_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10390;partial=true;start_range=.,1 NSLS01000065.1 Protein Homology CDS 1 135 . - 0 ID=cds-PDP47434.1;Parent=gene-CLI77_10390;Dbxref=NCBI_GP:PDP47434.1;Name=PDP47434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874206.1;locus_tag=CLI77_10390;partial=true;product=mobilization protein;protein_id=PDP47434.1;start_range=.,1;transl_table=11 NSLS01000065.1 Genbank gene 362 1594 . + . ID=gene-CLI77_10395;Name=CLI77_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10395 NSLS01000065.1 GeneMarkS+ CDS 362 1594 . + 0 ID=cds-PDP47430.1;Parent=gene-CLI77_10395;Dbxref=NCBI_GP:PDP47430.1;Name=PDP47430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10395;product=hypothetical protein;protein_id=PDP47430.1;transl_table=11 NSLS01000065.1 Genbank gene 1739 2278 . + . ID=gene-CLI77_10400;Name=CLI77_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10400 NSLS01000065.1 Protein Homology CDS 1739 2278 . + 0 ID=cds-PDP47431.1;Parent=gene-CLI77_10400;Dbxref=NCBI_GP:PDP47431.1;Name=PDP47431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00078.25;locus_tag=CLI77_10400;product=hypothetical protein;protein_id=PDP47431.1;transl_table=11 NSLS01000065.1 Genbank gene 2245 2781 . + . ID=gene-CLI77_10405;Name=CLI77_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10405 NSLS01000065.1 Protein Homology CDS 2245 2781 . + 0 ID=cds-PDP47432.1;Parent=gene-CLI77_10405;Dbxref=NCBI_GP:PDP47432.1;Name=PDP47432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00078.25;locus_tag=CLI77_10405;product=hypothetical protein;protein_id=PDP47432.1;transl_table=11 NSLS01000065.1 Genbank gene 2866 3115 . - . ID=gene-CLI77_10410;Name=CLI77_10410;end_range=3115,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10410;partial=true NSLS01000065.1 Protein Homology CDS 2866 3115 . - 1 ID=cds-PDP47433.1;Parent=gene-CLI77_10410;Dbxref=NCBI_GP:PDP47433.1;Name=PDP47433.1;end_range=3115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966703.1;locus_tag=CLI77_10410;partial=true;product=integrase;protein_id=PDP47433.1;transl_table=11 ##sequence-region NSLS01000066.1 1 2484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000066.1 Genbank region 1 2484 . + . ID=NSLS01000066.1:1..2484;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000066.1 Genbank gene 1 88 . - . ID=gene-CLI77_10415;Name=CLI77_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10415;partial=true;start_range=.,1 NSLS01000066.1 Protein Homology CDS 1 88 . - 0 ID=cds-PDP47420.1;Parent=gene-CLI77_10415;Dbxref=NCBI_GP:PDP47420.1;Name=PDP47420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004294387.1;locus_tag=CLI77_10415;partial=true;product=conjugative transposon protein TraN;protein_id=PDP47420.1;start_range=.,1;transl_table=11 NSLS01000066.1 Genbank gene 115 1917 . - . ID=gene-CLI77_10420;Name=CLI77_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10420 NSLS01000066.1 Protein Homology CDS 115 1917 . - 0 ID=cds-PDP47419.1;Parent=gene-CLI77_10420;Dbxref=NCBI_GP:PDP47419.1;Name=PDP47419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007219678.1;locus_tag=CLI77_10420;product=group II intron reverse transcriptase/maturase;protein_id=PDP47419.1;transl_table=11 NSLS01000066.1 Genbank pseudogene 1930 2380 . - . ID=gene-CLI77_10425;Name=CLI77_10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10425;pseudo=true NSLS01000066.1 Protein Homology CDS 1930 2380 . - 0 ID=cds-CLI77_10425;Parent=gene-CLI77_10425;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007851780.1;locus_tag=CLI77_10425;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000067.1 1 2232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000067.1 Genbank region 1 2232 . + . ID=NSLS01000067.1:1..2232;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000067.1 Genbank gene 29 151 . + . ID=gene-CLI77_10430;Name=CLI77_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10430 NSLS01000067.1 Protein Homology CDS 29 151 . + 0 ID=cds-PDP47329.1;Parent=gene-CLI77_10430;Dbxref=NCBI_GP:PDP47329.1;Name=PDP47329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_10430;product=DNA methylase;protein_id=PDP47329.1;transl_table=11 NSLS01000067.1 Genbank gene 309 1481 . + . ID=gene-CLI77_10435;Name=CLI77_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10435 NSLS01000067.1 Protein Homology CDS 309 1481 . + 0 ID=cds-PDP47327.1;Parent=gene-CLI77_10435;Dbxref=NCBI_GP:PDP47327.1;Name=PDP47327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873762.1;locus_tag=CLI77_10435;product=ATP-binding protein;protein_id=PDP47327.1;transl_table=11 NSLS01000067.1 Genbank gene 1518 1904 . + . ID=gene-CLI77_10440;Name=CLI77_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10440 NSLS01000067.1 Protein Homology CDS 1518 1904 . + 0 ID=cds-PDP47328.1;Parent=gene-CLI77_10440;Dbxref=NCBI_GP:PDP47328.1;Name=PDP47328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457333.1;locus_tag=CLI77_10440;product=hypothetical protein;protein_id=PDP47328.1;transl_table=11 NSLS01000067.1 Genbank gene 2014 2232 . - . ID=gene-CLI77_10445;Name=CLI77_10445;end_range=2232,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10445;partial=true NSLS01000067.1 Protein Homology CDS 2014 2232 . - 0 ID=cds-PDP47330.1;Parent=gene-CLI77_10445;Dbxref=NCBI_GP:PDP47330.1;Name=PDP47330.1;end_range=2232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585699.1;locus_tag=CLI77_10445;partial=true;product=hypothetical protein;protein_id=PDP47330.1;transl_table=11 ##sequence-region NSLS01000068.1 1 1996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000068.1 Genbank region 1 1996 . + . ID=NSLS01000068.1:1..1996;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000068.1 Genbank pseudogene 43 1996 . - . ID=gene-CLI77_10450;Name=CLI77_10450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10450;pseudo=true NSLS01000068.1 Protein Homology CDS 43 1996 . - 2 ID=cds-CLI77_10450;Parent=gene-CLI77_10450;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965528.1;locus_tag=CLI77_10450;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000069.1 1 1728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000069.1 Genbank region 1 1728 . + . ID=NSLS01000069.1:1..1728;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000069.1 Genbank gene 126 380 . + . ID=gene-CLI77_10455;Name=CLI77_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10455 NSLS01000069.1 Protein Homology CDS 126 380 . + 0 ID=cds-PDP47215.1;Parent=gene-CLI77_10455;Dbxref=NCBI_GP:PDP47215.1;Name=PDP47215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457620.1%2CRefSeq:WP_013815431.1;locus_tag=CLI77_10455;product=hypothetical protein;protein_id=PDP47215.1;transl_table=11 NSLS01000069.1 Genbank gene 442 549 . - . ID=gene-CLI77_10460;Name=CLI77_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10460 NSLS01000069.1 Protein Homology CDS 442 549 . - 0 ID=cds-PDP47217.1;Parent=gene-CLI77_10460;Dbxref=NCBI_GP:PDP47217.1;Name=PDP47217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874092.1;locus_tag=CLI77_10460;product=DNA methylase;protein_id=PDP47217.1;transl_table=11 NSLS01000069.1 Genbank gene 599 1684 . - . ID=gene-CLI77_10465;Name=CLI77_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10465 NSLS01000069.1 Protein Homology CDS 599 1684 . - 0 ID=cds-PDP47216.1;Parent=gene-CLI77_10465;Dbxref=NCBI_GP:PDP47216.1;Name=PDP47216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_10465;product=IS5/IS1182 family transposase;protein_id=PDP47216.1;transl_table=11 ##sequence-region NSLS01000006.1 1 80470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000006.1 Genbank region 1 80470 . + . ID=NSLS01000006.1:1..80470;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000006.1 Genbank gene 1 628 . + . ID=gene-CLI77_02775;Name=CLI77_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02775;partial=true;start_range=.,1 NSLS01000006.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP49938.1;Parent=gene-CLI77_02775;Dbxref=NCBI_GP:PDP49938.1;Name=PDP49938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_02775;partial=true;product=IS3 family transposase;protein_id=PDP49938.1;start_range=.,1;transl_table=11 NSLS01000006.1 Genbank gene 801 1058 . + . ID=gene-CLI77_02780;Name=CLI77_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02780 NSLS01000006.1 Protein Homology CDS 801 1058 . + 0 ID=cds-PDP49939.1;Parent=gene-CLI77_02780;Dbxref=NCBI_GP:PDP49939.1;Name=PDP49939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873537.1;locus_tag=CLI77_02780;product=hypothetical protein;protein_id=PDP49939.1;transl_table=11 NSLS01000006.1 Genbank gene 1055 3109 . + . ID=gene-CLI77_02785;Name=CLI77_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02785 NSLS01000006.1 Protein Homology CDS 1055 3109 . + 0 ID=cds-PDP49940.1;Parent=gene-CLI77_02785;Dbxref=NCBI_GP:PDP49940.1;Name=PDP49940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873540.1;locus_tag=CLI77_02785;product=molecular chaperone HtpG;protein_id=PDP49940.1;transl_table=11 NSLS01000006.1 Genbank gene 3291 4145 . - . ID=gene-CLI77_02790;Name=CLI77_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02790 NSLS01000006.1 Protein Homology CDS 3291 4145 . - 0 ID=cds-PDP49941.1;Parent=gene-CLI77_02790;Dbxref=NCBI_GP:PDP49941.1;Name=PDP49941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965734.1;locus_tag=CLI77_02790;product=phosphatidate cytidylyltransferase;protein_id=PDP49941.1;transl_table=11 NSLS01000006.1 Genbank gene 4174 6195 . - . ID=gene-CLI77_02795;Name=CLI77_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02795 NSLS01000006.1 Protein Homology CDS 4174 6195 . - 0 ID=cds-PDP49942.1;Parent=gene-CLI77_02795;Dbxref=NCBI_GP:PDP49942.1;Name=PDP49942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583445.1;locus_tag=CLI77_02795;product=cell division protein FtsH;protein_id=PDP49942.1;transl_table=11 NSLS01000006.1 Genbank gene 6400 7503 . - . ID=gene-CLI77_02800;Name=CLI77_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02800 NSLS01000006.1 Protein Homology CDS 6400 7503 . - 0 ID=cds-PDP49943.1;Parent=gene-CLI77_02800;Dbxref=NCBI_GP:PDP49943.1;Name=PDP49943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007661265.1;locus_tag=CLI77_02800;product=redox-regulated ATPase YchF;protein_id=PDP49943.1;transl_table=11 NSLS01000006.1 Genbank gene 7984 8997 . - . ID=gene-CLI77_02805;Name=CLI77_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02805 NSLS01000006.1 Protein Homology CDS 7984 8997 . - 0 ID=cds-PDP49944.1;Parent=gene-CLI77_02805;Dbxref=NCBI_GP:PDP49944.1;Name=PDP49944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584589.1;locus_tag=CLI77_02805;product=peptidase M24;protein_id=PDP49944.1;transl_table=11 NSLS01000006.1 Genbank gene 9053 9295 . + . ID=gene-CLI77_02810;Name=CLI77_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02810 NSLS01000006.1 Protein Homology CDS 9053 9295 . + 0 ID=cds-PDP49945.1;Parent=gene-CLI77_02810;Dbxref=NCBI_GP:PDP49945.1;Name=PDP49945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584590.1;locus_tag=CLI77_02810;product=hypothetical protein;protein_id=PDP49945.1;transl_table=11 NSLS01000006.1 Genbank gene 9390 10130 . + . ID=gene-CLI77_02815;Name=CLI77_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02815 NSLS01000006.1 Protein Homology CDS 9390 10130 . + 0 ID=cds-PDP49946.1;Parent=gene-CLI77_02815;Dbxref=NCBI_GP:PDP49946.1;Name=PDP49946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874958.1;locus_tag=CLI77_02815;product=phosphonate ABC transporter ATP-binding protein;protein_id=PDP49946.1;transl_table=11 NSLS01000006.1 Genbank gene 10148 11488 . + . ID=gene-CLI77_02820;Name=CLI77_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02820 NSLS01000006.1 Protein Homology CDS 10148 11488 . + 0 ID=cds-PDP49947.1;Parent=gene-CLI77_02820;Dbxref=NCBI_GP:PDP49947.1;Name=PDP49947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815136.1;locus_tag=CLI77_02820;product=aspartate kinase;protein_id=PDP49947.1;transl_table=11 NSLS01000006.1 Genbank gene 11517 12665 . + . ID=gene-CLI77_02825;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CLI77_02825 NSLS01000006.1 Protein Homology CDS 11517 12665 . + 0 ID=cds-PDP49948.1;Parent=gene-CLI77_02825;Dbxref=NCBI_GP:PDP49948.1;Name=PDP49948.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965768.1;locus_tag=CLI77_02825;product=diaminopimelate decarboxylase;protein_id=PDP49948.1;transl_table=11 NSLS01000006.1 Genbank gene 12655 13542 . + . ID=gene-CLI77_02830;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CLI77_02830 NSLS01000006.1 Protein Homology CDS 12655 13542 . + 0 ID=cds-PDP49949.1;Parent=gene-CLI77_02830;Dbxref=NCBI_GP:PDP49949.1;Name=PDP49949.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965767.1;locus_tag=CLI77_02830;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=PDP49949.1;transl_table=11 NSLS01000006.1 Genbank gene 13634 14014 . + . ID=gene-CLI77_02835;Name=CLI77_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02835 NSLS01000006.1 Protein Homology CDS 13634 14014 . + 0 ID=cds-PDP49950.1;Parent=gene-CLI77_02835;Dbxref=NCBI_GP:PDP49950.1;Name=PDP49950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584596.1;locus_tag=CLI77_02835;product=transcriptional regulator;protein_id=PDP49950.1;transl_table=11 NSLS01000006.1 Genbank gene 14049 15365 . + . ID=gene-CLI77_02840;Name=CLI77_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02840 NSLS01000006.1 Protein Homology CDS 14049 15365 . + 0 ID=cds-PDP49951.1;Parent=gene-CLI77_02840;Dbxref=NCBI_GP:PDP49951.1;Name=PDP49951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956517.1;locus_tag=CLI77_02840;product=energy transducer TonB;protein_id=PDP49951.1;transl_table=11 NSLS01000006.1 Genbank gene 16142 17497 . + . ID=gene-CLI77_02845;Name=CLI77_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02845 NSLS01000006.1 Protein Homology CDS 16142 17497 . + 0 ID=cds-PDP49952.1;Parent=gene-CLI77_02845;Dbxref=NCBI_GP:PDP49952.1;Name=PDP49952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965762.1;locus_tag=CLI77_02845;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=PDP49952.1;transl_table=11 NSLS01000006.1 Genbank gene 17528 18727 . + . ID=gene-CLI77_02850;Name=nqrB;gbkey=Gene;gene=nqrB;gene_biotype=protein_coding;locus_tag=CLI77_02850 NSLS01000006.1 Protein Homology CDS 17528 18727 . + 0 ID=cds-PDP49953.1;Parent=gene-CLI77_02850;Dbxref=NCBI_GP:PDP49953.1;Name=PDP49953.1;gbkey=CDS;gene=nqrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956516.1;locus_tag=CLI77_02850;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=PDP49953.1;transl_table=11 NSLS01000006.1 Genbank gene 18751 19485 . + . ID=gene-CLI77_02855;Name=CLI77_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02855 NSLS01000006.1 Protein Homology CDS 18751 19485 . + 0 ID=cds-PDP49954.1;Parent=gene-CLI77_02855;Dbxref=NCBI_GP:PDP49954.1;Name=PDP49954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965760.1;locus_tag=CLI77_02855;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit C;protein_id=PDP49954.1;transl_table=11 NSLS01000006.1 Genbank gene 19491 20120 . + . ID=gene-CLI77_02860;Name=nqrD;gbkey=Gene;gene=nqrD;gene_biotype=protein_coding;locus_tag=CLI77_02860 NSLS01000006.1 Protein Homology CDS 19491 20120 . + 0 ID=cds-PDP49955.1;Parent=gene-CLI77_02860;Dbxref=NCBI_GP:PDP49955.1;Name=PDP49955.1;gbkey=CDS;gene=nqrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637998.1;locus_tag=CLI77_02860;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=PDP49955.1;transl_table=11 NSLS01000006.1 Genbank gene 20160 20774 . + . ID=gene-CLI77_02865;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=CLI77_02865 NSLS01000006.1 Protein Homology CDS 20160 20774 . + 0 ID=cds-PDP49956.1;Parent=gene-CLI77_02865;Dbxref=NCBI_GP:PDP49956.1;Name=PDP49956.1;gbkey=CDS;gene=nqrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364974.1;locus_tag=CLI77_02865;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=PDP49956.1;transl_table=11 NSLS01000006.1 Genbank gene 20793 22031 . + . ID=gene-CLI77_02870;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=CLI77_02870 NSLS01000006.1 Protein Homology CDS 20793 22031 . + 0 ID=cds-PDP49957.1;Parent=gene-CLI77_02870;Dbxref=NCBI_GP:PDP49957.1;Name=PDP49957.1;gbkey=CDS;gene=nqrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457259.1;locus_tag=CLI77_02870;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=PDP49957.1;transl_table=11 NSLS01000006.1 Genbank gene 22363 22437 . - . ID=gene-CLI77_02875;Name=CLI77_02875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_02875 NSLS01000006.1 tRNAscan-SE tRNA 22363 22437 . - . ID=rna-CLI77_02875;Parent=gene-CLI77_02875;anticodon=(pos:complement(22403..22405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02875;product=tRNA-Met NSLS01000006.1 tRNAscan-SE exon 22363 22437 . - . ID=exon-CLI77_02875-1;Parent=rna-CLI77_02875;anticodon=(pos:complement(22403..22405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02875;product=tRNA-Met NSLS01000006.1 Genbank gene 22965 23447 . + . ID=gene-CLI77_02880;Name=CLI77_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02880 NSLS01000006.1 Protein Homology CDS 22965 23447 . + 0 ID=cds-PDP49958.1;Parent=gene-CLI77_02880;Dbxref=NCBI_GP:PDP49958.1;Name=PDP49958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874961.1;locus_tag=CLI77_02880;product=TlpA family protein disulfide reductase;protein_id=PDP49958.1;transl_table=11 NSLS01000006.1 Genbank gene 23503 25248 . + . ID=gene-CLI77_02885;Name=CLI77_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02885 NSLS01000006.1 Protein Homology CDS 23503 25248 . + 0 ID=cds-PDP49959.1;Parent=gene-CLI77_02885;Dbxref=NCBI_GP:PDP49959.1;Name=PDP49959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816005.1;locus_tag=CLI77_02885;product=hypothetical protein;protein_id=PDP49959.1;transl_table=11 NSLS01000006.1 Genbank gene 25268 26140 . + . ID=gene-CLI77_02890;Name=CLI77_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02890 NSLS01000006.1 Protein Homology CDS 25268 26140 . + 0 ID=cds-PDP49960.1;Parent=gene-CLI77_02890;Dbxref=NCBI_GP:PDP49960.1;Name=PDP49960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816006.1;locus_tag=CLI77_02890;product=hypothetical protein;protein_id=PDP49960.1;transl_table=11 NSLS01000006.1 Genbank gene 26163 26885 . + . ID=gene-CLI77_02895;Name=CLI77_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02895 NSLS01000006.1 Protein Homology CDS 26163 26885 . + 0 ID=cds-PDP49961.1;Parent=gene-CLI77_02895;Dbxref=NCBI_GP:PDP49961.1;Name=PDP49961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816007.1;locus_tag=CLI77_02895;product=hypothetical protein;protein_id=PDP49961.1;transl_table=11 NSLS01000006.1 Genbank gene 27104 28063 . + . ID=gene-CLI77_02900;Name=CLI77_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02900 NSLS01000006.1 Protein Homology CDS 27104 28063 . + 0 ID=cds-PDP49962.1;Parent=gene-CLI77_02900;Dbxref=NCBI_GP:PDP49962.1;Name=PDP49962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816009.1;locus_tag=CLI77_02900;product=dihydrofolate reductase;protein_id=PDP49962.1;transl_table=11 NSLS01000006.1 Genbank gene 28102 29391 . + . ID=gene-CLI77_02905;Name=CLI77_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02905 NSLS01000006.1 Protein Homology CDS 28102 29391 . + 0 ID=cds-PDP49963.1;Parent=gene-CLI77_02905;Dbxref=NCBI_GP:PDP49963.1;Name=PDP49963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457266.1;locus_tag=CLI77_02905;product=MFS transporter;protein_id=PDP49963.1;transl_table=11 NSLS01000006.1 Genbank pseudogene 29722 29949 . + . ID=gene-CLI77_02910;Name=CLI77_02910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02910;pseudo=true NSLS01000006.1 Protein Homology CDS 29722 29949 . + 0 ID=cds-CLI77_02910;Parent=gene-CLI77_02910;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874045.1;locus_tag=CLI77_02910;product=histidinol phosphate aminotransferase;pseudo=true;transl_table=11 NSLS01000006.1 Genbank gene 30338 30931 . + . ID=gene-CLI77_02915;Name=CLI77_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02915 NSLS01000006.1 Protein Homology CDS 30338 30931 . + 0 ID=cds-PDP49964.1;Parent=gene-CLI77_02915;Dbxref=NCBI_GP:PDP49964.1;Name=PDP49964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583687.1;locus_tag=CLI77_02915;product=DUF3575 domain-containing protein;protein_id=PDP49964.1;transl_table=11 NSLS01000006.1 Genbank gene 30976 32415 . + . ID=gene-CLI77_02920;Name=CLI77_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02920 NSLS01000006.1 Protein Homology CDS 30976 32415 . + 0 ID=cds-PDP50008.1;Parent=gene-CLI77_02920;Dbxref=NCBI_GP:PDP50008.1;Name=PDP50008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874535.1;locus_tag=CLI77_02920;product=hypothetical protein;protein_id=PDP50008.1;transl_table=11 NSLS01000006.1 Genbank gene 32875 34422 . + . ID=gene-CLI77_02925;Name=CLI77_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02925 NSLS01000006.1 Protein Homology CDS 32875 34422 . + 0 ID=cds-PDP49965.1;Parent=gene-CLI77_02925;Dbxref=NCBI_GP:PDP49965.1;Name=PDP49965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583690.1;locus_tag=CLI77_02925;product=glycine--tRNA ligase;protein_id=PDP49965.1;transl_table=11 NSLS01000006.1 Genbank gene 34419 34976 . + . ID=gene-CLI77_02930;Name=CLI77_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02930 NSLS01000006.1 Protein Homology CDS 34419 34976 . + 0 ID=cds-PDP49966.1;Parent=gene-CLI77_02930;Dbxref=NCBI_GP:PDP49966.1;Name=PDP49966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457328.1;locus_tag=CLI77_02930;product=peptidylprolyl isomerase;protein_id=PDP49966.1;transl_table=11 NSLS01000006.1 Genbank gene 34973 35743 . + . ID=gene-CLI77_02935;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CLI77_02935 NSLS01000006.1 Protein Homology CDS 34973 35743 . + 0 ID=cds-PDP49967.1;Parent=gene-CLI77_02935;Dbxref=NCBI_GP:PDP49967.1;Name=PDP49967.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583692.1;locus_tag=CLI77_02935;product=5'/3'-nucleotidase SurE;protein_id=PDP49967.1;transl_table=11 NSLS01000006.1 Genbank gene 35780 36931 . + . ID=gene-CLI77_02940;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CLI77_02940 NSLS01000006.1 Protein Homology CDS 35780 36931 . + 0 ID=cds-PDP49968.1;Parent=gene-CLI77_02940;Dbxref=NCBI_GP:PDP49968.1;Name=PDP49968.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965953.1;locus_tag=CLI77_02940;product=lipid-A-disaccharide synthase;protein_id=PDP49968.1;transl_table=11 NSLS01000006.1 Genbank gene 36928 37827 . + . ID=gene-CLI77_02945;Name=CLI77_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02945 NSLS01000006.1 Protein Homology CDS 36928 37827 . + 0 ID=cds-PDP49969.1;Parent=gene-CLI77_02945;Dbxref=NCBI_GP:PDP49969.1;Name=PDP49969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874537.1;locus_tag=CLI77_02945;product=AraC family transcriptional regulator;protein_id=PDP49969.1;transl_table=11 NSLS01000006.1 Genbank pseudogene 37946 38142 . + . ID=gene-CLI77_02950;Name=CLI77_02950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02950;pseudo=true NSLS01000006.1 Protein Homology CDS 37946 38142 . + 0 ID=cds-CLI77_02950;Parent=gene-CLI77_02950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873904.1;locus_tag=CLI77_02950;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000006.1 Genbank pseudogene 38313 38516 . + . ID=gene-CLI77_02955;Name=CLI77_02955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_02955;pseudo=true NSLS01000006.1 Protein Homology CDS 38313 38516 . + 0 ID=cds-CLI77_02955;Parent=gene-CLI77_02955;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816302.1;locus_tag=CLI77_02955;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000006.1 Genbank gene 38727 40124 . - . ID=gene-CLI77_02960;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CLI77_02960 NSLS01000006.1 Protein Homology CDS 38727 40124 . - 0 ID=cds-PDP49970.1;Parent=gene-CLI77_02960;Dbxref=NCBI_GP:PDP49970.1;Name=PDP49970.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816022.1;locus_tag=CLI77_02960;product=protoporphyrinogen oxidase;protein_id=PDP49970.1;transl_table=11 NSLS01000006.1 Genbank gene 40128 40553 . - . ID=gene-CLI77_02965;Name=CLI77_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02965 NSLS01000006.1 Protein Homology CDS 40128 40553 . - 0 ID=cds-PDP49971.1;Parent=gene-CLI77_02965;Dbxref=NCBI_GP:PDP49971.1;Name=PDP49971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965859.1;locus_tag=CLI77_02965;product=Fe-S metabolism protein SufE;protein_id=PDP49971.1;transl_table=11 NSLS01000006.1 Genbank gene 40577 41578 . - . ID=gene-CLI77_02970;Name=CLI77_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02970 NSLS01000006.1 Protein Homology CDS 40577 41578 . - 0 ID=cds-PDP49972.1;Parent=gene-CLI77_02970;Dbxref=NCBI_GP:PDP49972.1;Name=PDP49972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457324.1;locus_tag=CLI77_02970;product=glutamine cyclotransferase;protein_id=PDP49972.1;transl_table=11 NSLS01000006.1 Genbank gene 41926 42672 . + . ID=gene-CLI77_02975;Name=CLI77_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02975 NSLS01000006.1 Protein Homology CDS 41926 42672 . + 0 ID=cds-PDP49973.1;Parent=gene-CLI77_02975;Dbxref=NCBI_GP:PDP49973.1;Name=PDP49973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816024.1;locus_tag=CLI77_02975;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=PDP49973.1;transl_table=11 NSLS01000006.1 Genbank gene 42709 43599 . + . ID=gene-CLI77_02980;Name=CLI77_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02980 NSLS01000006.1 Protein Homology CDS 42709 43599 . + 0 ID=cds-PDP49974.1;Parent=gene-CLI77_02980;Dbxref=NCBI_GP:PDP49974.1;Name=PDP49974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457322.1;locus_tag=CLI77_02980;product=conjugal transfer protein TraB;protein_id=PDP49974.1;transl_table=11 NSLS01000006.1 Genbank gene 43626 43811 . + . ID=gene-CLI77_02985;Name=CLI77_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02985 NSLS01000006.1 Protein Homology CDS 43626 43811 . + 0 ID=cds-PDP49975.1;Parent=gene-CLI77_02985;Dbxref=NCBI_GP:PDP49975.1;Name=PDP49975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874305.1;locus_tag=CLI77_02985;product=hypothetical protein;protein_id=PDP49975.1;transl_table=11 NSLS01000006.1 Genbank gene 43931 44006 . - . ID=gene-CLI77_02990;Name=CLI77_02990;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_02990 NSLS01000006.1 tRNAscan-SE tRNA 43931 44006 . - . ID=rna-CLI77_02990;Parent=gene-CLI77_02990;anticodon=(pos:complement(43971..43973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02990;product=tRNA-Pro NSLS01000006.1 tRNAscan-SE exon 43931 44006 . - . ID=exon-CLI77_02990-1;Parent=rna-CLI77_02990;anticodon=(pos:complement(43971..43973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_02990;product=tRNA-Pro NSLS01000006.1 Genbank gene 44313 44519 . + . ID=gene-CLI77_02995;Name=CLI77_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_02995 NSLS01000006.1 Protein Homology CDS 44313 44519 . + 0 ID=cds-PDP49976.1;Parent=gene-CLI77_02995;Dbxref=NCBI_GP:PDP49976.1;Name=PDP49976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458655.1;locus_tag=CLI77_02995;product=hypothetical protein;protein_id=PDP49976.1;transl_table=11 NSLS01000006.1 Genbank gene 44657 46024 . + . ID=gene-CLI77_03000;Name=CLI77_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03000 NSLS01000006.1 Protein Homology CDS 44657 46024 . + 0 ID=cds-PDP49977.1;Parent=gene-CLI77_03000;Dbxref=NCBI_GP:PDP49977.1;Name=PDP49977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01640.15;locus_tag=CLI77_03000;product=hypothetical protein;protein_id=PDP49977.1;transl_table=11 NSLS01000006.1 Genbank gene 46014 46694 . + . ID=gene-CLI77_03005;Name=CLI77_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03005 NSLS01000006.1 GeneMarkS+ CDS 46014 46694 . + 0 ID=cds-PDP49978.1;Parent=gene-CLI77_03005;Dbxref=NCBI_GP:PDP49978.1;Name=PDP49978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_03005;product=hypothetical protein;protein_id=PDP49978.1;transl_table=11 NSLS01000006.1 Genbank gene 46789 46971 . + . ID=gene-CLI77_03010;Name=CLI77_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03010 NSLS01000006.1 Protein Homology CDS 46789 46971 . + 0 ID=cds-PDP49979.1;Parent=gene-CLI77_03010;Dbxref=NCBI_GP:PDP49979.1;Name=PDP49979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873474.1;locus_tag=CLI77_03010;product=integrase;protein_id=PDP49979.1;transl_table=11 NSLS01000006.1 Genbank gene 47217 48722 . + . ID=gene-CLI77_03015;Name=CLI77_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03015 NSLS01000006.1 Protein Homology CDS 47217 48722 . + 0 ID=cds-PDP49980.1;Parent=gene-CLI77_03015;Dbxref=NCBI_GP:PDP49980.1;Name=PDP49980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457320.1;locus_tag=CLI77_03015;product=peptidoglycan-binding protein LysM;protein_id=PDP49980.1;transl_table=11 NSLS01000006.1 Genbank gene 48782 49453 . + . ID=gene-CLI77_03020;Name=CLI77_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03020 NSLS01000006.1 Protein Homology CDS 48782 49453 . + 0 ID=cds-PDP49981.1;Parent=gene-CLI77_03020;Dbxref=NCBI_GP:PDP49981.1;Name=PDP49981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873476.1;locus_tag=CLI77_03020;product=hypothetical protein;protein_id=PDP49981.1;transl_table=11 NSLS01000006.1 Genbank gene 49615 50952 . + . ID=gene-CLI77_03025;Name=CLI77_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03025 NSLS01000006.1 Protein Homology CDS 49615 50952 . + 0 ID=cds-PDP49982.1;Parent=gene-CLI77_03025;Dbxref=NCBI_GP:PDP49982.1;Name=PDP49982.1;Note=high-affinity transporter for xanthine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873470.1;locus_tag=CLI77_03025;product=xanthine permease XanP;protein_id=PDP49982.1;transl_table=11 NSLS01000006.1 Genbank gene 50989 51570 . + . ID=gene-CLI77_03030;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CLI77_03030 NSLS01000006.1 Protein Homology CDS 50989 51570 . + 0 ID=cds-PDP49983.1;Parent=gene-CLI77_03030;Dbxref=NCBI_GP:PDP49983.1;Name=PDP49983.1;gbkey=CDS;gene=xpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584630.1;locus_tag=CLI77_03030;product=xanthine phosphoribosyltransferase;protein_id=PDP49983.1;transl_table=11 NSLS01000006.1 Genbank gene 51769 52455 . - . ID=gene-CLI77_03035;Name=CLI77_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03035 NSLS01000006.1 Protein Homology CDS 51769 52455 . - 0 ID=cds-PDP49984.1;Parent=gene-CLI77_03035;Dbxref=NCBI_GP:PDP49984.1;Name=PDP49984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816030.1;locus_tag=CLI77_03035;product=SAM-dependent methyltransferase;protein_id=PDP49984.1;transl_table=11 NSLS01000006.1 Genbank gene 52481 53128 . - . ID=gene-CLI77_03040;Name=CLI77_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03040 NSLS01000006.1 Protein Homology CDS 52481 53128 . - 0 ID=cds-PDP49985.1;Parent=gene-CLI77_03040;Dbxref=NCBI_GP:PDP49985.1;Name=PDP49985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584632.1;locus_tag=CLI77_03040;product=polysaccharide deacetylase family protein;protein_id=PDP49985.1;transl_table=11 NSLS01000006.1 Genbank gene 53129 56428 . - . ID=gene-CLI77_03045;Name=CLI77_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03045 NSLS01000006.1 Protein Homology CDS 53129 56428 . - 0 ID=cds-PDP49986.1;Parent=gene-CLI77_03045;Dbxref=NCBI_GP:PDP49986.1;Name=PDP49986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584633.1;locus_tag=CLI77_03045;product=hypothetical protein;protein_id=PDP49986.1;transl_table=11 NSLS01000006.1 Genbank gene 56479 57792 . - . ID=gene-CLI77_03050;Name=CLI77_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03050 NSLS01000006.1 Protein Homology CDS 56479 57792 . - 0 ID=cds-PDP49987.1;Parent=gene-CLI77_03050;Dbxref=NCBI_GP:PDP49987.1;Name=PDP49987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618627.1;locus_tag=CLI77_03050;product=ribosome biogenesis GTPase Der;protein_id=PDP49987.1;transl_table=11 NSLS01000006.1 Genbank gene 57855 58754 . - . ID=gene-CLI77_03055;Name=CLI77_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03055 NSLS01000006.1 Protein Homology CDS 57855 58754 . - 0 ID=cds-PDP49988.1;Parent=gene-CLI77_03055;Dbxref=NCBI_GP:PDP49988.1;Name=PDP49988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873468.1;locus_tag=CLI77_03055;product=GTPase Era;protein_id=PDP49988.1;transl_table=11 NSLS01000006.1 Genbank gene 58833 59840 . - . ID=gene-CLI77_03060;Name=CLI77_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03060 NSLS01000006.1 Protein Homology CDS 58833 59840 . - 0 ID=cds-PDP49989.1;Parent=gene-CLI77_03060;Dbxref=NCBI_GP:PDP49989.1;Name=PDP49989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965455.1;locus_tag=CLI77_03060;product=3-oxoacyl-ACP synthase III;protein_id=PDP49989.1;transl_table=11 NSLS01000006.1 Genbank gene 60020 60205 . - . ID=gene-CLI77_03065;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CLI77_03065 NSLS01000006.1 Protein Homology CDS 60020 60205 . - 0 ID=cds-PDP49990.1;Parent=gene-CLI77_03065;Dbxref=NCBI_GP:PDP49990.1;Name=PDP49990.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562387.1;locus_tag=CLI77_03065;product=50S ribosomal protein L32;protein_id=PDP49990.1;transl_table=11 NSLS01000006.1 Genbank gene 60212 60763 . - . ID=gene-CLI77_03070;Name=CLI77_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03070 NSLS01000006.1 Protein Homology CDS 60212 60763 . - 0 ID=cds-PDP49991.1;Parent=gene-CLI77_03070;Dbxref=NCBI_GP:PDP49991.1;Name=PDP49991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965454.1;locus_tag=CLI77_03070;product=hypothetical protein;protein_id=PDP49991.1;transl_table=11 NSLS01000006.1 Genbank pseudogene 61046 61272 . + . ID=gene-CLI77_03075;Name=CLI77_03075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03075;pseudo=true NSLS01000006.1 Protein Homology CDS 61046 61272 . + 0 ID=cds-CLI77_03075;Parent=gene-CLI77_03075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816034.1;locus_tag=CLI77_03075;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000006.1 Genbank gene 61295 62947 . - . ID=gene-CLI77_03080;Name=CLI77_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03080 NSLS01000006.1 Protein Homology CDS 61295 62947 . - 0 ID=cds-PDP49992.1;Parent=gene-CLI77_03080;Dbxref=NCBI_GP:PDP49992.1;Name=PDP49992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816035.1;locus_tag=CLI77_03080;product=protein FimE;protein_id=PDP49992.1;transl_table=11 NSLS01000006.1 Genbank gene 62944 64947 . - . ID=gene-CLI77_03085;Name=CLI77_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03085 NSLS01000006.1 Protein Homology CDS 62944 64947 . - 0 ID=cds-PDP49993.1;Parent=gene-CLI77_03085;Dbxref=NCBI_GP:PDP49993.1;Name=PDP49993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584642.1;locus_tag=CLI77_03085;product=protein FimD;protein_id=PDP49993.1;transl_table=11 NSLS01000006.1 Genbank gene 64962 66323 . - . ID=gene-CLI77_03090;Name=CLI77_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03090 NSLS01000006.1 Protein Homology CDS 64962 66323 . - 0 ID=cds-PDP50009.1;Parent=gene-CLI77_03090;Dbxref=NCBI_GP:PDP50009.1;Name=PDP50009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873473.1;locus_tag=CLI77_03090;product=fimbrial assembly protein;protein_id=PDP50009.1;transl_table=11 NSLS01000006.1 Genbank gene 66337 67248 . - . ID=gene-CLI77_03095;Name=CLI77_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03095 NSLS01000006.1 Protein Homology CDS 66337 67248 . - 0 ID=cds-PDP49994.1;Parent=gene-CLI77_03095;Dbxref=NCBI_GP:PDP49994.1;Name=PDP49994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873477.1;locus_tag=CLI77_03095;product=fimbrillin-A associated anchor protein Mfa1 and Mfa2;protein_id=PDP49994.1;transl_table=11 NSLS01000006.1 Genbank gene 67387 68550 . - . ID=gene-CLI77_03100;Name=CLI77_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03100 NSLS01000006.1 Protein Homology CDS 67387 68550 . - 0 ID=cds-PDP49995.1;Parent=gene-CLI77_03100;Dbxref=NCBI_GP:PDP49995.1;Name=PDP49995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965150.1;locus_tag=CLI77_03100;product=fimbrial protein;protein_id=PDP49995.1;transl_table=11 NSLS01000006.1 Genbank gene 68606 70078 . - . ID=gene-CLI77_03105;Name=CLI77_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03105 NSLS01000006.1 Protein Homology CDS 68606 70078 . - 0 ID=cds-PDP49996.1;Parent=gene-CLI77_03105;Dbxref=NCBI_GP:PDP49996.1;Name=PDP49996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584646.1;locus_tag=CLI77_03105;product=hypothetical protein;protein_id=PDP49996.1;transl_table=11 NSLS01000006.1 Genbank gene 70104 70685 . - . ID=gene-CLI77_03110;Name=CLI77_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03110 NSLS01000006.1 Protein Homology CDS 70104 70685 . - 0 ID=cds-PDP49997.1;Parent=gene-CLI77_03110;Dbxref=NCBI_GP:PDP49997.1;Name=PDP49997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584647.1;locus_tag=CLI77_03110;product=DUF3575 domain-containing protein;protein_id=PDP49997.1;transl_table=11 NSLS01000006.1 Genbank gene 71235 71678 . + . ID=gene-CLI77_03115;Name=CLI77_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03115 NSLS01000006.1 Protein Homology CDS 71235 71678 . + 0 ID=cds-PDP49998.1;Parent=gene-CLI77_03115;Dbxref=NCBI_GP:PDP49998.1;Name=PDP49998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816042.1;locus_tag=CLI77_03115;product=DUF4494 domain-containing protein;protein_id=PDP49998.1;transl_table=11 NSLS01000006.1 Genbank gene 71675 72349 . + . ID=gene-CLI77_03120;Name=CLI77_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03120 NSLS01000006.1 Protein Homology CDS 71675 72349 . + 0 ID=cds-PDP49999.1;Parent=gene-CLI77_03120;Dbxref=NCBI_GP:PDP49999.1;Name=PDP49999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965286.1;locus_tag=CLI77_03120;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=PDP49999.1;transl_table=11 NSLS01000006.1 Genbank gene 72463 73410 . + . ID=gene-CLI77_03125;Name=CLI77_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03125 NSLS01000006.1 Protein Homology CDS 72463 73410 . + 0 ID=cds-PDP50000.1;Parent=gene-CLI77_03125;Dbxref=NCBI_GP:PDP50000.1;Name=PDP50000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816044.1;locus_tag=CLI77_03125;product=AraC family transcriptional regulator;protein_id=PDP50000.1;transl_table=11 NSLS01000006.1 Genbank gene 73552 74562 . - . ID=gene-CLI77_03130;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CLI77_03130 NSLS01000006.1 Protein Homology CDS 73552 74562 . - 0 ID=cds-PDP50001.1;Parent=gene-CLI77_03130;Dbxref=NCBI_GP:PDP50001.1;Name=PDP50001.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584653.1;locus_tag=CLI77_03130;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=PDP50001.1;transl_table=11 NSLS01000006.1 Genbank gene 74573 74845 . - . ID=gene-CLI77_03135;Name=CLI77_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03135 NSLS01000006.1 Protein Homology CDS 74573 74845 . - 0 ID=cds-PDP50002.1;Parent=gene-CLI77_03135;Dbxref=NCBI_GP:PDP50002.1;Name=PDP50002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956505.1;locus_tag=CLI77_03135;product=hypothetical protein;protein_id=PDP50002.1;transl_table=11 NSLS01000006.1 Genbank pseudogene 74839 74952 . + . ID=gene-CLI77_03140;Name=CLI77_03140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03140;pseudo=true NSLS01000006.1 Protein Homology CDS 74839 74952 . + 0 ID=cds-CLI77_03140;Parent=gene-CLI77_03140;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584862.1;locus_tag=CLI77_03140;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLS01000006.1 Genbank gene 75162 76241 . + . ID=gene-CLI77_03145;Name=CLI77_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03145 NSLS01000006.1 Protein Homology CDS 75162 76241 . + 0 ID=cds-PDP50003.1;Parent=gene-CLI77_03145;Dbxref=NCBI_GP:PDP50003.1;Name=PDP50003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956504.1;locus_tag=CLI77_03145;product=asparaginase;protein_id=PDP50003.1;transl_table=11 NSLS01000006.1 Genbank gene 76294 77103 . + . ID=gene-CLI77_03150;Name=CLI77_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03150 NSLS01000006.1 Protein Homology CDS 76294 77103 . + 0 ID=cds-PDP50004.1;Parent=gene-CLI77_03150;Dbxref=NCBI_GP:PDP50004.1;Name=PDP50004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873709.1;locus_tag=CLI77_03150;product=MBL fold metallo-hydrolase;protein_id=PDP50004.1;transl_table=11 NSLS01000006.1 Genbank gene 77218 78189 . - . ID=gene-CLI77_03155;Name=CLI77_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03155 NSLS01000006.1 Protein Homology CDS 77218 78189 . - 0 ID=cds-PDP50005.1;Parent=gene-CLI77_03155;Dbxref=NCBI_GP:PDP50005.1;Name=PDP50005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873711.1;locus_tag=CLI77_03155;product=gfo/Idh/MocA family oxidoreductase;protein_id=PDP50005.1;transl_table=11 NSLS01000006.1 Genbank gene 78414 78820 . + . ID=gene-CLI77_03160;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CLI77_03160 NSLS01000006.1 cmsearch tmRNA 78414 78820 . + . ID=rna-CLI77_03160;Parent=gene-CLI77_03160;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_03160;product=transfer-messenger RNA NSLS01000006.1 cmsearch exon 78414 78820 . + . ID=exon-CLI77_03160-1;Parent=rna-CLI77_03160;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_03160;product=transfer-messenger RNA NSLS01000006.1 Genbank gene 78973 79551 . + . ID=gene-CLI77_03165;Name=CLI77_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03165 NSLS01000006.1 Protein Homology CDS 78973 79551 . + 0 ID=cds-PDP50006.1;Parent=gene-CLI77_03165;Dbxref=NCBI_GP:PDP50006.1;Name=PDP50006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005642538.1;locus_tag=CLI77_03165;product=30S ribosomal protein S16;protein_id=PDP50006.1;transl_table=11 NSLS01000006.1 Genbank gene 79949 80161 . - . ID=gene-CLI77_03170;Name=CLI77_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03170 NSLS01000006.1 Protein Homology CDS 79949 80161 . - 0 ID=cds-PDP50007.1;Parent=gene-CLI77_03170;Dbxref=NCBI_GP:PDP50007.1;Name=PDP50007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956503.1;locus_tag=CLI77_03170;product=hypothetical protein;protein_id=PDP50007.1;transl_table=11 ##sequence-region NSLS01000070.1 1 1654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000070.1 Genbank region 1 1654 . + . ID=NSLS01000070.1:1..1654;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000070.1 Genbank pseudogene 33 131 . - . ID=gene-CLI77_10470;Name=CLI77_10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10470;pseudo=true NSLS01000070.1 Protein Homology CDS 33 131 . - 0 ID=cds-CLI77_10470;Parent=gene-CLI77_10470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI77_10470;product=integrase;pseudo=true;transl_table=11 NSLS01000070.1 Genbank gene 375 1654 . - . ID=gene-CLI77_10475;Name=CLI77_10475;end_range=1654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10475;partial=true NSLS01000070.1 Protein Homology CDS 375 1654 . - 2 ID=cds-PDP47207.1;Parent=gene-CLI77_10475;Dbxref=NCBI_GP:PDP47207.1;Name=PDP47207.1;end_range=1654,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_10475;partial=true;product=hemagglutinin;protein_id=PDP47207.1;transl_table=11 ##sequence-region NSLS01000071.1 1 1559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000071.1 Genbank region 1 1559 . + . ID=NSLS01000071.1:1..1559;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000071.1 Genbank gene 21 587 . + . ID=gene-CLI77_10480;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CLI77_10480 NSLS01000071.1 Protein Homology CDS 21 587 . + 0 ID=cds-PDP47148.1;Parent=gene-CLI77_10480;Dbxref=NCBI_GP:PDP47148.1;Name=PDP47148.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467438.1;locus_tag=CLI77_10480;product=elongation factor P;protein_id=PDP47148.1;transl_table=11 NSLS01000071.1 Genbank gene 885 1100 . + . ID=gene-CLI77_10485;Name=CLI77_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10485 NSLS01000071.1 Protein Homology CDS 885 1100 . + 0 ID=cds-PDP47146.1;Parent=gene-CLI77_10485;Dbxref=NCBI_GP:PDP47146.1;Name=PDP47146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457648.1;locus_tag=CLI77_10485;product=hypothetical protein;protein_id=PDP47146.1;transl_table=11 NSLS01000071.1 Genbank gene 1123 1559 . + . ID=gene-CLI77_10490;Name=CLI77_10490;end_range=1559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10490;partial=true NSLS01000071.1 Protein Homology CDS 1123 1559 . + 0 ID=cds-PDP47147.1;Parent=gene-CLI77_10490;Dbxref=NCBI_GP:PDP47147.1;Name=PDP47147.1;end_range=1559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457647.1;locus_tag=CLI77_10490;partial=true;product=histidinol phosphate aminotransferase;protein_id=PDP47147.1;transl_table=11 ##sequence-region NSLS01000072.1 1 1515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000072.1 Genbank region 1 1515 . + . ID=NSLS01000072.1:1..1515;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000072.1 Genbank gene 1 1515 . - . ID=gene-CLI77_10495;Name=CLI77_10495;end_range=1515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10495;partial=true;start_range=.,1 NSLS01000072.1 GeneMarkS+ CDS 1 1515 . - 0 ID=cds-PDP47137.1;Parent=gene-CLI77_10495;Dbxref=NCBI_GP:PDP47137.1;Name=PDP47137.1;end_range=1515,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10495;partial=true;product=hypothetical protein;protein_id=PDP47137.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000073.1 1 1432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000073.1 Genbank region 1 1432 . + . ID=NSLS01000073.1:1..1432;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000073.1 Genbank gene 115 1422 . + . ID=gene-CLI77_10500;Name=CLI77_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10500 NSLS01000073.1 Protein Homology CDS 115 1422 . + 0 ID=cds-PDP47075.1;Parent=gene-CLI77_10500;Dbxref=NCBI_GP:PDP47075.1;Name=PDP47075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956029.1;locus_tag=CLI77_10500;product=IS5/IS1182 family transposase;protein_id=PDP47075.1;transl_table=11 ##sequence-region NSLS01000074.1 1 1301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000074.1 Genbank region 1 1301 . + . ID=NSLS01000074.1:1..1301;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000074.1 Genbank pseudogene 259 1288 . + . ID=gene-CLI77_10505;Name=CLI77_10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10505;pseudo=true NSLS01000074.1 Protein Homology CDS 259 1288 . + 0 ID=cds-CLI77_10505;Parent=gene-CLI77_10505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI77_10505;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000075.1 1 1280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000075.1 Genbank region 1 1280 . + . ID=NSLS01000075.1:1..1280;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000075.1 Genbank gene 1 1280 . + . ID=gene-CLI77_10510;Name=CLI77_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10510;partial=true;start_range=.,1 NSLS01000075.1 Protein Homology CDS 1 1280 . + 2 ID=cds-PDP47009.1;Parent=gene-CLI77_10510;Dbxref=NCBI_GP:PDP47009.1;Name=PDP47009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_10510;partial=true;product=hemagglutinin;protein_id=PDP47009.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000076.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000076.1 Genbank region 1 1278 . + . ID=NSLS01000076.1:1..1278;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000076.1 Genbank gene 149 1234 . - . ID=gene-CLI77_10515;Name=CLI77_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10515 NSLS01000076.1 Protein Homology CDS 149 1234 . - 0 ID=cds-PDP46929.1;Parent=gene-CLI77_10515;Dbxref=NCBI_GP:PDP46929.1;Name=PDP46929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_10515;product=IS5/IS1182 family transposase;protein_id=PDP46929.1;transl_table=11 ##sequence-region NSLS01000077.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000077.1 Genbank region 1 1278 . + . ID=NSLS01000077.1:1..1278;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000077.1 Genbank gene 45 1130 . + . ID=gene-CLI77_10520;Name=CLI77_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10520 NSLS01000077.1 Protein Homology CDS 45 1130 . + 0 ID=cds-PDP46924.1;Parent=gene-CLI77_10520;Dbxref=NCBI_GP:PDP46924.1;Name=PDP46924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_10520;product=IS5/IS1182 family transposase;protein_id=PDP46924.1;transl_table=11 ##sequence-region NSLS01000078.1 1 1263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000078.1 Genbank region 1 1263 . + . ID=NSLS01000078.1:1..1263;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000078.1 Genbank gene 116 340 . + . ID=gene-CLI77_10525;Name=CLI77_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10525 NSLS01000078.1 Protein Homology CDS 116 340 . + 0 ID=cds-PDP46863.1;Parent=gene-CLI77_10525;Dbxref=NCBI_GP:PDP46863.1;Name=PDP46863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874043.1;locus_tag=CLI77_10525;product=transcriptional regulator;protein_id=PDP46863.1;transl_table=11 NSLS01000078.1 Genbank gene 850 1263 . + . ID=gene-CLI77_10530;Name=CLI77_10530;end_range=1263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10530;partial=true NSLS01000078.1 GeneMarkS+ CDS 850 1263 . + 0 ID=cds-PDP46862.1;Parent=gene-CLI77_10530;Dbxref=NCBI_GP:PDP46862.1;Name=PDP46862.1;end_range=1263,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10530;partial=true;product=hypothetical protein;protein_id=PDP46862.1;transl_table=11 ##sequence-region NSLS01000079.1 1 1260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000079.1 Genbank region 1 1260 . + . ID=NSLS01000079.1:1..1260;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000079.1 Genbank gene 161 1105 . + . ID=gene-CLI77_10535;Name=CLI77_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10535 NSLS01000079.1 Protein Homology CDS 161 1105 . + 0 ID=cds-PDP46854.1;Parent=gene-CLI77_10535;Dbxref=NCBI_GP:PDP46854.1;Name=PDP46854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338517.1;locus_tag=CLI77_10535;product=hypothetical protein;protein_id=PDP46854.1;transl_table=11 ##sequence-region NSLS01000007.1 1 78493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000007.1 Genbank region 1 78493 . + . ID=NSLS01000007.1:1..78493;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000007.1 Genbank gene 1 310 . + . ID=gene-CLI77_03175;Name=CLI77_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03175;partial=true;start_range=.,1 NSLS01000007.1 Protein Homology CDS 1 310 . + 1 ID=cds-PDP49857.1;Parent=gene-CLI77_03175;Dbxref=NCBI_GP:PDP49857.1;Name=PDP49857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_03175;partial=true;product=IS982 family transposase;protein_id=PDP49857.1;start_range=.,1;transl_table=11 NSLS01000007.1 Genbank gene 647 1975 . - . ID=gene-CLI77_03180;Name=CLI77_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03180 NSLS01000007.1 Protein Homology CDS 647 1975 . - 0 ID=cds-PDP49858.1;Parent=gene-CLI77_03180;Dbxref=NCBI_GP:PDP49858.1;Name=PDP49858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956166.1;locus_tag=CLI77_03180;product=ABC transporter permease;protein_id=PDP49858.1;transl_table=11 NSLS01000007.1 Genbank gene 1962 2939 . - . ID=gene-CLI77_03185;Name=CLI77_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03185 NSLS01000007.1 Protein Homology CDS 1962 2939 . - 0 ID=cds-PDP49859.1;Parent=gene-CLI77_03185;Dbxref=NCBI_GP:PDP49859.1;Name=PDP49859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584172.1;locus_tag=CLI77_03185;product=ABC transporter ATP-binding protein;protein_id=PDP49859.1;transl_table=11 NSLS01000007.1 Genbank gene 2942 3415 . - . ID=gene-CLI77_03190;Name=CLI77_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03190 NSLS01000007.1 Protein Homology CDS 2942 3415 . - 0 ID=cds-PDP49860.1;Parent=gene-CLI77_03190;Dbxref=NCBI_GP:PDP49860.1;Name=PDP49860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964600.1;locus_tag=CLI77_03190;product=hypothetical protein;protein_id=PDP49860.1;transl_table=11 NSLS01000007.1 Genbank gene 3484 4260 . + . ID=gene-CLI77_03195;Name=CLI77_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03195 NSLS01000007.1 Protein Homology CDS 3484 4260 . + 0 ID=cds-PDP49861.1;Parent=gene-CLI77_03195;Dbxref=NCBI_GP:PDP49861.1;Name=PDP49861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584174.1;locus_tag=CLI77_03195;product=AMP nucleosidase;protein_id=PDP49861.1;transl_table=11 NSLS01000007.1 Genbank gene 4279 5286 . + . ID=gene-CLI77_03200;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CLI77_03200 NSLS01000007.1 Protein Homology CDS 4279 5286 . + 0 ID=cds-PDP49862.1;Parent=gene-CLI77_03200;Dbxref=NCBI_GP:PDP49862.1;Name=PDP49862.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457946.1;locus_tag=CLI77_03200;product=DNA polymerase III subunit delta;protein_id=PDP49862.1;transl_table=11 NSLS01000007.1 Genbank gene 5454 5834 . + . ID=gene-CLI77_03205;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CLI77_03205 NSLS01000007.1 Protein Homology CDS 5454 5834 . + 0 ID=cds-PDP49863.1;Parent=gene-CLI77_03205;Dbxref=NCBI_GP:PDP49863.1;Name=PDP49863.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584176.1;locus_tag=CLI77_03205;product=glycine cleavage system protein H;protein_id=PDP49863.1;transl_table=11 NSLS01000007.1 Genbank gene 5835 6341 . + . ID=gene-CLI77_03210;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CLI77_03210 NSLS01000007.1 Protein Homology CDS 5835 6341 . + 0 ID=cds-PDP49864.1;Parent=gene-CLI77_03210;Dbxref=NCBI_GP:PDP49864.1;Name=PDP49864.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860133.1;locus_tag=CLI77_03210;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=PDP49864.1;transl_table=11 NSLS01000007.1 Genbank gene 6515 8260 . + . ID=gene-CLI77_03215;Name=CLI77_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03215 NSLS01000007.1 Protein Homology CDS 6515 8260 . + 0 ID=cds-PDP49865.1;Parent=gene-CLI77_03215;Dbxref=NCBI_GP:PDP49865.1;Name=PDP49865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457945.1;locus_tag=CLI77_03215;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=PDP49865.1;transl_table=11 NSLS01000007.1 Genbank gene 8317 8751 . + . ID=gene-CLI77_03220;Name=CLI77_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03220 NSLS01000007.1 Protein Homology CDS 8317 8751 . + 0 ID=cds-PDP49866.1;Parent=gene-CLI77_03220;Dbxref=NCBI_GP:PDP49866.1;Name=PDP49866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956168.1;locus_tag=CLI77_03220;product=dUTP diphosphatase;protein_id=PDP49866.1;transl_table=11 NSLS01000007.1 Genbank gene 8779 10518 . + . ID=gene-CLI77_03225;Name=CLI77_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03225 NSLS01000007.1 Protein Homology CDS 8779 10518 . + 0 ID=cds-PDP49867.1;Parent=gene-CLI77_03225;Dbxref=NCBI_GP:PDP49867.1;Name=PDP49867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584180.1;locus_tag=CLI77_03225;product=hypothetical protein;protein_id=PDP49867.1;transl_table=11 NSLS01000007.1 Genbank gene 10518 11378 . + . ID=gene-CLI77_03230;Name=CLI77_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03230 NSLS01000007.1 Protein Homology CDS 10518 11378 . + 0 ID=cds-PDP49919.1;Parent=gene-CLI77_03230;Dbxref=NCBI_GP:PDP49919.1;Name=PDP49919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815721.1;locus_tag=CLI77_03230;product=DUF4292 domain-containing protein;protein_id=PDP49919.1;transl_table=11 NSLS01000007.1 Genbank gene 11390 12691 . + . ID=gene-CLI77_03235;Name=CLI77_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03235 NSLS01000007.1 Protein Homology CDS 11390 12691 . + 0 ID=cds-PDP49868.1;Parent=gene-CLI77_03235;Dbxref=NCBI_GP:PDP49868.1;Name=PDP49868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874395.1;locus_tag=CLI77_03235;product=peptidase M24;protein_id=PDP49868.1;transl_table=11 NSLS01000007.1 Genbank gene 12679 13650 . + . ID=gene-CLI77_03240;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CLI77_03240 NSLS01000007.1 Protein Homology CDS 12679 13650 . + 0 ID=cds-PDP49869.1;Parent=gene-CLI77_03240;Dbxref=NCBI_GP:PDP49869.1;Name=PDP49869.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584183.1;locus_tag=CLI77_03240;product=riboflavin biosynthesis protein RibF;protein_id=PDP49869.1;transl_table=11 NSLS01000007.1 Genbank gene 13684 15066 . - . ID=gene-CLI77_03245;Name=CLI77_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03245 NSLS01000007.1 Protein Homology CDS 13684 15066 . - 0 ID=cds-PDP49870.1;Parent=gene-CLI77_03245;Dbxref=NCBI_GP:PDP49870.1;Name=PDP49870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964613.1;locus_tag=CLI77_03245;product=YihY/virulence factor BrkB family protein;protein_id=PDP49870.1;transl_table=11 NSLS01000007.1 Genbank gene 15147 15545 . - . ID=gene-CLI77_03250;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CLI77_03250 NSLS01000007.1 cmsearch RNase_P_RNA 15147 15545 . - . ID=rna-CLI77_03250;Parent=gene-CLI77_03250;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_03250;product=RNase P RNA component class A NSLS01000007.1 cmsearch exon 15147 15545 . - . ID=exon-CLI77_03250-1;Parent=rna-CLI77_03250;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI77_03250;product=RNase P RNA component class A NSLS01000007.1 Genbank gene 15572 16690 . - . ID=gene-CLI77_03255;Name=CLI77_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03255 NSLS01000007.1 Protein Homology CDS 15572 16690 . - 0 ID=cds-PDP49871.1;Parent=gene-CLI77_03255;Dbxref=NCBI_GP:PDP49871.1;Name=PDP49871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584185.1;locus_tag=CLI77_03255;product=MRP family ATP-binding protein;protein_id=PDP49871.1;transl_table=11 NSLS01000007.1 Genbank gene 16710 17477 . - . ID=gene-CLI77_03260;Name=CLI77_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03260 NSLS01000007.1 Protein Homology CDS 16710 17477 . - 0 ID=cds-PDP49872.1;Parent=gene-CLI77_03260;Dbxref=NCBI_GP:PDP49872.1;Name=PDP49872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457937.1;locus_tag=CLI77_03260;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=PDP49872.1;transl_table=11 NSLS01000007.1 Genbank gene 17492 17821 . - . ID=gene-CLI77_03265;Name=CLI77_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03265 NSLS01000007.1 Protein Homology CDS 17492 17821 . - 0 ID=cds-PDP49873.1;Parent=gene-CLI77_03265;Dbxref=NCBI_GP:PDP49873.1;Name=PDP49873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964616.1;locus_tag=CLI77_03265;product=hypothetical protein;protein_id=PDP49873.1;transl_table=11 NSLS01000007.1 Genbank gene 17876 19357 . - . ID=gene-CLI77_03270;Name=CLI77_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03270 NSLS01000007.1 Protein Homology CDS 17876 19357 . - 0 ID=cds-PDP49874.1;Parent=gene-CLI77_03270;Dbxref=NCBI_GP:PDP49874.1;Name=PDP49874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008860821.1;locus_tag=CLI77_03270;product=proline--tRNA ligase;protein_id=PDP49874.1;transl_table=11 NSLS01000007.1 Genbank gene 19638 19883 . - . ID=gene-CLI77_03275;Name=CLI77_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03275 NSLS01000007.1 Protein Homology CDS 19638 19883 . - 0 ID=cds-PDP49875.1;Parent=gene-CLI77_03275;Dbxref=NCBI_GP:PDP49875.1;Name=PDP49875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584190.1;locus_tag=CLI77_03275;product=hypothetical protein;protein_id=PDP49875.1;transl_table=11 NSLS01000007.1 Genbank gene 19950 20660 . - . ID=gene-CLI77_03280;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CLI77_03280 NSLS01000007.1 Protein Homology CDS 19950 20660 . - 0 ID=cds-PDP49876.1;Parent=gene-CLI77_03280;Dbxref=NCBI_GP:PDP49876.1;Name=PDP49876.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584191.1;locus_tag=CLI77_03280;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=PDP49876.1;transl_table=11 NSLS01000007.1 Genbank gene 20662 21327 . - . ID=gene-CLI77_03285;Name=CLI77_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03285 NSLS01000007.1 Protein Homology CDS 20662 21327 . - 0 ID=cds-PDP49877.1;Parent=gene-CLI77_03285;Dbxref=NCBI_GP:PDP49877.1;Name=PDP49877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584192.1;locus_tag=CLI77_03285;product=phosphatidylserine decarboxylase proenzyme;protein_id=PDP49877.1;transl_table=11 NSLS01000007.1 Genbank gene 21866 22192 . + . ID=gene-CLI77_03290;Name=CLI77_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03290 NSLS01000007.1 Protein Homology CDS 21866 22192 . + 0 ID=cds-PDP49878.1;Parent=gene-CLI77_03290;Dbxref=NCBI_GP:PDP49878.1;Name=PDP49878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815730.1;locus_tag=CLI77_03290;product=hypothetical protein;protein_id=PDP49878.1;transl_table=11 NSLS01000007.1 Genbank pseudogene 22486 22915 . + . ID=gene-CLI77_03295;Name=CLI77_03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03295;pseudo=true NSLS01000007.1 Protein Homology CDS 22486 22915 . + 0 ID=cds-CLI77_03295;Parent=gene-CLI77_03295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362579.1;locus_tag=CLI77_03295;product=lysozyme;pseudo=true;transl_table=11 NSLS01000007.1 Genbank gene 22981 24738 . + . ID=gene-CLI77_03300;Name=CLI77_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03300 NSLS01000007.1 Protein Homology CDS 22981 24738 . + 0 ID=cds-PDP49879.1;Parent=gene-CLI77_03300;Dbxref=NCBI_GP:PDP49879.1;Name=PDP49879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362381.1;locus_tag=CLI77_03300;product=hypothetical protein;protein_id=PDP49879.1;transl_table=11 NSLS01000007.1 Genbank gene 24753 25532 . + . ID=gene-CLI77_03305;Name=CLI77_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03305 NSLS01000007.1 Protein Homology CDS 24753 25532 . + 0 ID=cds-PDP49920.1;Parent=gene-CLI77_03305;Dbxref=NCBI_GP:PDP49920.1;Name=PDP49920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362379.1;locus_tag=CLI77_03305;product=hypothetical protein;protein_id=PDP49920.1;transl_table=11 NSLS01000007.1 Genbank gene 25798 25882 . + . ID=gene-CLI77_03310;Name=CLI77_03310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03310 NSLS01000007.1 tRNAscan-SE tRNA 25798 25882 . + . ID=rna-CLI77_03310;Parent=gene-CLI77_03310;anticodon=(pos:25832..25834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03310;product=tRNA-Leu NSLS01000007.1 tRNAscan-SE exon 25798 25882 . + . ID=exon-CLI77_03310-1;Parent=rna-CLI77_03310;anticodon=(pos:25832..25834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03310;product=tRNA-Leu NSLS01000007.1 Genbank gene 26065 27282 . - . ID=gene-CLI77_03315;Name=CLI77_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03315 NSLS01000007.1 Protein Homology CDS 26065 27282 . - 0 ID=cds-PDP49880.1;Parent=gene-CLI77_03315;Dbxref=NCBI_GP:PDP49880.1;Name=PDP49880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874383.1;locus_tag=CLI77_03315;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=PDP49880.1;transl_table=11 NSLS01000007.1 Genbank gene 27421 29736 . + . ID=gene-CLI77_03320;Name=CLI77_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03320 NSLS01000007.1 Protein Homology CDS 27421 29736 . + 0 ID=cds-PDP49881.1;Parent=gene-CLI77_03320;Dbxref=NCBI_GP:PDP49881.1;Name=PDP49881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584196.1;locus_tag=CLI77_03320;product=alpha-mannosidase;protein_id=PDP49881.1;transl_table=11 NSLS01000007.1 Genbank pseudogene 29816 30046 . + . ID=gene-CLI77_03325;Name=CLI77_03325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03325;pseudo=true NSLS01000007.1 Protein Homology CDS 29816 30046 . + 0 ID=cds-CLI77_03325;Parent=gene-CLI77_03325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816655.1;locus_tag=CLI77_03325;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000007.1 Genbank gene 30061 30210 . + . ID=gene-CLI77_03330;Name=CLI77_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03330 NSLS01000007.1 Protein Homology CDS 30061 30210 . + 0 ID=cds-PDP49882.1;Parent=gene-CLI77_03330;Dbxref=NCBI_GP:PDP49882.1;Name=PDP49882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815734.1;locus_tag=CLI77_03330;product=hypothetical protein;protein_id=PDP49882.1;transl_table=11 NSLS01000007.1 Genbank gene 30494 31486 . + . ID=gene-CLI77_03335;Name=CLI77_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03335 NSLS01000007.1 Protein Homology CDS 30494 31486 . + 0 ID=cds-PDP49883.1;Parent=gene-CLI77_03335;Dbxref=NCBI_GP:PDP49883.1;Name=PDP49883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815735.1;locus_tag=CLI77_03335;product=PhoH family protein;protein_id=PDP49883.1;transl_table=11 NSLS01000007.1 Genbank gene 31543 32484 . + . ID=gene-CLI77_03340;Name=CLI77_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03340 NSLS01000007.1 Protein Homology CDS 31543 32484 . + 0 ID=cds-PDP49884.1;Parent=gene-CLI77_03340;Dbxref=NCBI_GP:PDP49884.1;Name=PDP49884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584198.1;locus_tag=CLI77_03340;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=PDP49884.1;transl_table=11 NSLS01000007.1 Genbank gene 32516 33253 . + . ID=gene-CLI77_03345;Name=CLI77_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03345 NSLS01000007.1 Protein Homology CDS 32516 33253 . + 0 ID=cds-PDP49885.1;Parent=gene-CLI77_03345;Dbxref=NCBI_GP:PDP49885.1;Name=PDP49885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964371.1;locus_tag=CLI77_03345;product=demethylmenaquinone methyltransferase;protein_id=PDP49885.1;transl_table=11 NSLS01000007.1 Genbank gene 33250 33999 . + . ID=gene-CLI77_03350;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CLI77_03350 NSLS01000007.1 Protein Homology CDS 33250 33999 . + 0 ID=cds-PDP49886.1;Parent=gene-CLI77_03350;Dbxref=NCBI_GP:PDP49886.1;Name=PDP49886.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457926.1;locus_tag=CLI77_03350;product=shikimate dehydrogenase;protein_id=PDP49886.1;transl_table=11 NSLS01000007.1 Genbank gene 34032 36356 . + . ID=gene-CLI77_03355;Name=CLI77_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03355 NSLS01000007.1 Protein Homology CDS 34032 36356 . + 0 ID=cds-PDP49887.1;Parent=gene-CLI77_03355;Dbxref=NCBI_GP:PDP49887.1;Name=PDP49887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584201.1;locus_tag=CLI77_03355;product=hypothetical protein;protein_id=PDP49887.1;transl_table=11 NSLS01000007.1 Genbank gene 37020 37092 . + . ID=gene-CLI77_03360;Name=CLI77_03360;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03360 NSLS01000007.1 tRNAscan-SE tRNA 37020 37092 . + . ID=rna-CLI77_03360;Parent=gene-CLI77_03360;anticodon=(pos:37053..37055);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03360;product=tRNA-Phe NSLS01000007.1 tRNAscan-SE exon 37020 37092 . + . ID=exon-CLI77_03360-1;Parent=rna-CLI77_03360;anticodon=(pos:37053..37055);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03360;product=tRNA-Phe NSLS01000007.1 Genbank gene 37410 37916 . + . ID=gene-CLI77_03365;Name=CLI77_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03365 NSLS01000007.1 Protein Homology CDS 37410 37916 . + 0 ID=cds-PDP49888.1;Parent=gene-CLI77_03365;Dbxref=NCBI_GP:PDP49888.1;Name=PDP49888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584218.1;locus_tag=CLI77_03365;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP49888.1;transl_table=11 NSLS01000007.1 Genbank gene 37906 38466 . + . ID=gene-CLI77_03370;Name=CLI77_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03370 NSLS01000007.1 Protein Homology CDS 37906 38466 . + 0 ID=cds-PDP49889.1;Parent=gene-CLI77_03370;Dbxref=NCBI_GP:PDP49889.1;Name=PDP49889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875419.1;locus_tag=CLI77_03370;product=hypothetical protein;protein_id=PDP49889.1;transl_table=11 NSLS01000007.1 Genbank gene 38482 39258 . + . ID=gene-CLI77_03375;Name=CLI77_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03375 NSLS01000007.1 Protein Homology CDS 38482 39258 . + 0 ID=cds-PDP49890.1;Parent=gene-CLI77_03375;Dbxref=NCBI_GP:PDP49890.1;Name=PDP49890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875425.1;locus_tag=CLI77_03375;product=DUF4252 domain-containing protein;protein_id=PDP49890.1;transl_table=11 NSLS01000007.1 Genbank pseudogene 39584 40598 . - . ID=gene-CLI77_03380;Name=CLI77_03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03380;pseudo=true NSLS01000007.1 Protein Homology CDS 39584 40598 . - 0 ID=cds-CLI77_03380;Parent=gene-CLI77_03380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226350.1;locus_tag=CLI77_03380;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLS01000007.1 Genbank gene 40776 40961 . + . ID=gene-CLI77_03385;Name=CLI77_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03385 NSLS01000007.1 Protein Homology CDS 40776 40961 . + 0 ID=cds-PDP49921.1;Parent=gene-CLI77_03385;Dbxref=NCBI_GP:PDP49921.1;Name=PDP49921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874574.1;locus_tag=CLI77_03385;product=hypothetical protein;protein_id=PDP49921.1;transl_table=11 NSLS01000007.1 Genbank gene 41129 41476 . - . ID=gene-CLI77_03390;Name=CLI77_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03390 NSLS01000007.1 Protein Homology CDS 41129 41476 . - 0 ID=cds-PDP49891.1;Parent=gene-CLI77_03390;Dbxref=NCBI_GP:PDP49891.1;Name=PDP49891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457918.1;locus_tag=CLI77_03390;product=50S ribosomal protein L20;protein_id=PDP49891.1;transl_table=11 NSLS01000007.1 Genbank gene 41589 41786 . - . ID=gene-CLI77_03395;Name=CLI77_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03395 NSLS01000007.1 Protein Homology CDS 41589 41786 . - 0 ID=cds-PDP49892.1;Parent=gene-CLI77_03395;Dbxref=NCBI_GP:PDP49892.1;Name=PDP49892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432744.1;locus_tag=CLI77_03395;product=50S ribosomal protein L35;protein_id=PDP49892.1;transl_table=11 NSLS01000007.1 Genbank gene 41864 42469 . - . ID=gene-CLI77_03400;Name=CLI77_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03400 NSLS01000007.1 Protein Homology CDS 41864 42469 . - 0 ID=cds-PDP49893.1;Parent=gene-CLI77_03400;Dbxref=NCBI_GP:PDP49893.1;Name=PDP49893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584227.1;locus_tag=CLI77_03400;product=translation initiation factor IF-3;protein_id=PDP49893.1;transl_table=11 NSLS01000007.1 Genbank gene 42574 44535 . - . ID=gene-CLI77_03405;Name=CLI77_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03405 NSLS01000007.1 Protein Homology CDS 42574 44535 . - 0 ID=cds-PDP49894.1;Parent=gene-CLI77_03405;Dbxref=NCBI_GP:PDP49894.1;Name=PDP49894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964838.1;locus_tag=CLI77_03405;product=threonine--tRNA ligase;protein_id=PDP49894.1;transl_table=11 NSLS01000007.1 Genbank pseudogene 44772 45221 . - . ID=gene-CLI77_03410;Name=CLI77_03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03410;pseudo=true NSLS01000007.1 Protein Homology CDS 44772 45221 . - 0 ID=cds-CLI77_03410;Parent=gene-CLI77_03410;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815996.1;locus_tag=CLI77_03410;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLS01000007.1 Genbank gene 45905 46123 . - . ID=gene-CLI77_03415;Name=CLI77_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03415 NSLS01000007.1 Protein Homology CDS 45905 46123 . - 0 ID=cds-PDP49895.1;Parent=gene-CLI77_03415;Dbxref=NCBI_GP:PDP49895.1;Name=PDP49895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457916.1;locus_tag=CLI77_03415;product=hypothetical protein;protein_id=PDP49895.1;transl_table=11 NSLS01000007.1 Genbank gene 46506 46820 . + . ID=gene-CLI77_03420;Name=CLI77_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03420 NSLS01000007.1 Protein Homology CDS 46506 46820 . + 0 ID=cds-PDP49896.1;Parent=gene-CLI77_03420;Dbxref=NCBI_GP:PDP49896.1;Name=PDP49896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584233.1;locus_tag=CLI77_03420;product=transcriptional regulator;protein_id=PDP49896.1;transl_table=11 NSLS01000007.1 Genbank gene 46917 47459 . + . ID=gene-CLI77_03425;Name=CLI77_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03425 NSLS01000007.1 Protein Homology CDS 46917 47459 . + 0 ID=cds-PDP49897.1;Parent=gene-CLI77_03425;Dbxref=NCBI_GP:PDP49897.1;Name=PDP49897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457913.1;locus_tag=CLI77_03425;product=HXXEE domain-containing protein;protein_id=PDP49897.1;transl_table=11 NSLS01000007.1 Genbank gene 47482 48114 . + . ID=gene-CLI77_03430;Name=CLI77_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03430 NSLS01000007.1 Protein Homology CDS 47482 48114 . + 0 ID=cds-PDP49898.1;Parent=gene-CLI77_03430;Dbxref=NCBI_GP:PDP49898.1;Name=PDP49898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874105.1;locus_tag=CLI77_03430;product=DNA alkylation repair enzyme;protein_id=PDP49898.1;transl_table=11 NSLS01000007.1 Genbank gene 48308 48559 . + . ID=gene-CLI77_03435;Name=CLI77_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03435 NSLS01000007.1 Protein Homology CDS 48308 48559 . + 0 ID=cds-PDP49899.1;Parent=gene-CLI77_03435;Dbxref=NCBI_GP:PDP49899.1;Name=PDP49899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815754.1;locus_tag=CLI77_03435;product=hypothetical protein;protein_id=PDP49899.1;transl_table=11 NSLS01000007.1 Genbank gene 48633 49625 . + . ID=gene-CLI77_03440;Name=CLI77_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03440 NSLS01000007.1 Protein Homology CDS 48633 49625 . + 0 ID=cds-PDP49900.1;Parent=gene-CLI77_03440;Dbxref=NCBI_GP:PDP49900.1;Name=PDP49900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815755.1;locus_tag=CLI77_03440;product=nitroreductase;protein_id=PDP49900.1;transl_table=11 NSLS01000007.1 Genbank gene 49784 52063 . - . ID=gene-CLI77_03445;Name=CLI77_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03445 NSLS01000007.1 Protein Homology CDS 49784 52063 . - 0 ID=cds-PDP49901.1;Parent=gene-CLI77_03445;Dbxref=NCBI_GP:PDP49901.1;Name=PDP49901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874085.1;locus_tag=CLI77_03445;product=S9 family peptidase;protein_id=PDP49901.1;transl_table=11 NSLS01000007.1 Genbank gene 52440 53180 . - . ID=gene-CLI77_03450;Name=CLI77_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03450 NSLS01000007.1 Protein Homology CDS 52440 53180 . - 0 ID=cds-PDP49902.1;Parent=gene-CLI77_03450;Dbxref=NCBI_GP:PDP49902.1;Name=PDP49902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965983.1;locus_tag=CLI77_03450;product=DUF2807 domain-containing protein;protein_id=PDP49902.1;transl_table=11 NSLS01000007.1 Genbank gene 53211 55661 . - . ID=gene-CLI77_03455;Name=CLI77_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03455 NSLS01000007.1 Protein Homology CDS 53211 55661 . - 0 ID=cds-PDP49922.1;Parent=gene-CLI77_03455;Dbxref=NCBI_GP:PDP49922.1;Name=PDP49922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965984.1;locus_tag=CLI77_03455;product=TonB-dependent receptor;protein_id=PDP49922.1;transl_table=11 NSLS01000007.1 Genbank gene 55935 56306 . - . ID=gene-CLI77_03460;Name=CLI77_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03460 NSLS01000007.1 Protein Homology CDS 55935 56306 . - 0 ID=cds-PDP49903.1;Parent=gene-CLI77_03460;Dbxref=NCBI_GP:PDP49903.1;Name=PDP49903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584244.1;locus_tag=CLI77_03460;product=GntR family transcriptional regulator;protein_id=PDP49903.1;transl_table=11 NSLS01000007.1 Genbank gene 56303 57061 . - . ID=gene-CLI77_03465;Name=CLI77_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03465 NSLS01000007.1 Protein Homology CDS 56303 57061 . - 0 ID=cds-PDP49904.1;Parent=gene-CLI77_03465;Dbxref=NCBI_GP:PDP49904.1;Name=PDP49904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458204.1;locus_tag=CLI77_03465;product=hypothetical protein;protein_id=PDP49904.1;transl_table=11 NSLS01000007.1 Genbank gene 57058 57912 . - . ID=gene-CLI77_03470;Name=CLI77_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03470 NSLS01000007.1 Protein Homology CDS 57058 57912 . - 0 ID=cds-PDP49905.1;Parent=gene-CLI77_03470;Dbxref=NCBI_GP:PDP49905.1;Name=PDP49905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874083.1;locus_tag=CLI77_03470;product=hypothetical protein;protein_id=PDP49905.1;transl_table=11 NSLS01000007.1 Genbank gene 57926 58753 . - . ID=gene-CLI77_03475;Name=CLI77_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03475 NSLS01000007.1 Protein Homology CDS 57926 58753 . - 0 ID=cds-PDP49906.1;Parent=gene-CLI77_03475;Dbxref=NCBI_GP:PDP49906.1;Name=PDP49906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815760.1;locus_tag=CLI77_03475;product=ABC transporter ATP-binding protein;protein_id=PDP49906.1;transl_table=11 NSLS01000007.1 Genbank gene 59500 60897 . - . ID=gene-CLI77_03480;Name=CLI77_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03480 NSLS01000007.1 Protein Homology CDS 59500 60897 . - 0 ID=cds-PDP49907.1;Parent=gene-CLI77_03480;Dbxref=NCBI_GP:PDP49907.1;Name=PDP49907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815761.1;locus_tag=CLI77_03480;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=PDP49907.1;transl_table=11 NSLS01000007.1 Genbank gene 61201 62697 . + . ID=gene-CLI77_03485;Name=CLI77_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03485 NSLS01000007.1 Protein Homology CDS 61201 62697 . + 0 ID=cds-PDP49908.1;Parent=gene-CLI77_03485;Dbxref=NCBI_GP:PDP49908.1;Name=PDP49908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634657.1;locus_tag=CLI77_03485;product=acetyl-CoA hydrolase;protein_id=PDP49908.1;transl_table=11 NSLS01000007.1 Genbank gene 63252 65576 . + . ID=gene-CLI77_03490;Name=CLI77_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03490 NSLS01000007.1 Protein Homology CDS 63252 65576 . + 0 ID=cds-PDP49909.1;Parent=gene-CLI77_03490;Dbxref=NCBI_GP:PDP49909.1;Name=PDP49909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965507.1;locus_tag=CLI77_03490;product=SIR2 family protein;protein_id=PDP49909.1;transl_table=11 NSLS01000007.1 Genbank gene 65942 68668 . + . ID=gene-CLI77_03495;Name=CLI77_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03495 NSLS01000007.1 Protein Homology CDS 65942 68668 . + 0 ID=cds-PDP49910.1;Parent=gene-CLI77_03495;Dbxref=NCBI_GP:PDP49910.1;Name=PDP49910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965505.1;locus_tag=CLI77_03495;product=pyruvate%2C phosphate dikinase;protein_id=PDP49910.1;transl_table=11 NSLS01000007.1 Genbank gene 68698 69006 . + . ID=gene-CLI77_03500;Name=CLI77_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03500 NSLS01000007.1 Protein Homology CDS 68698 69006 . + 0 ID=cds-PDP49911.1;Parent=gene-CLI77_03500;Dbxref=NCBI_GP:PDP49911.1;Name=PDP49911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815765.1;locus_tag=CLI77_03500;product=hypothetical protein;protein_id=PDP49911.1;transl_table=11 NSLS01000007.1 Genbank gene 69019 70200 . + . ID=gene-CLI77_03505;Name=CLI77_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03505 NSLS01000007.1 Protein Homology CDS 69019 70200 . + 0 ID=cds-PDP49912.1;Parent=gene-CLI77_03505;Dbxref=NCBI_GP:PDP49912.1;Name=PDP49912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584257.1;locus_tag=CLI77_03505;product=DUF4876 domain-containing protein;protein_id=PDP49912.1;transl_table=11 NSLS01000007.1 Genbank gene 70372 73182 . + . ID=gene-CLI77_03510;Name=CLI77_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03510 NSLS01000007.1 Protein Homology CDS 70372 73182 . + 0 ID=cds-PDP49913.1;Parent=gene-CLI77_03510;Dbxref=NCBI_GP:PDP49913.1;Name=PDP49913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815767.1;locus_tag=CLI77_03510;product=TonB-dependent receptor;protein_id=PDP49913.1;transl_table=11 NSLS01000007.1 Genbank gene 73179 74822 . + . ID=gene-CLI77_03515;Name=CLI77_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03515 NSLS01000007.1 Protein Homology CDS 73179 74822 . + 0 ID=cds-PDP49914.1;Parent=gene-CLI77_03515;Dbxref=NCBI_GP:PDP49914.1;Name=PDP49914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815768.1;locus_tag=CLI77_03515;product=hypothetical protein;protein_id=PDP49914.1;transl_table=11 NSLS01000007.1 Genbank gene 74865 75464 . - . ID=gene-CLI77_03520;Name=CLI77_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03520 NSLS01000007.1 Protein Homology CDS 74865 75464 . - 0 ID=cds-PDP49915.1;Parent=gene-CLI77_03520;Dbxref=NCBI_GP:PDP49915.1;Name=PDP49915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815769.1;locus_tag=CLI77_03520;product=hypothetical protein;protein_id=PDP49915.1;transl_table=11 NSLS01000007.1 Genbank gene 75471 76448 . - . ID=gene-CLI77_03525;Name=CLI77_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03525 NSLS01000007.1 Protein Homology CDS 75471 76448 . - 0 ID=cds-PDP49916.1;Parent=gene-CLI77_03525;Dbxref=NCBI_GP:PDP49916.1;Name=PDP49916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458192.1;locus_tag=CLI77_03525;product=aminodeoxychorismate synthase component I;protein_id=PDP49916.1;transl_table=11 NSLS01000007.1 Genbank gene 76622 76873 . - . ID=gene-CLI77_03530;Name=CLI77_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03530 NSLS01000007.1 Protein Homology CDS 76622 76873 . - 0 ID=cds-PDP49917.1;Parent=gene-CLI77_03530;Dbxref=NCBI_GP:PDP49917.1;Name=PDP49917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI77_03530;product=hypothetical protein;protein_id=PDP49917.1;transl_table=11 NSLS01000007.1 Genbank gene 76945 78033 . + . ID=gene-CLI77_03535;Name=CLI77_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03535 NSLS01000007.1 Protein Homology CDS 76945 78033 . + 0 ID=cds-PDP49918.1;Parent=gene-CLI77_03535;Dbxref=NCBI_GP:PDP49918.1;Name=PDP49918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584263.1;locus_tag=CLI77_03535;product=ATPase;protein_id=PDP49918.1;transl_table=11 NSLS01000007.1 Genbank pseudogene 78038 78367 . + . ID=gene-CLI77_03540;Name=CLI77_03540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03540;pseudo=true NSLS01000007.1 Protein Homology CDS 78038 78367 . + 0 ID=cds-CLI77_03540;Parent=gene-CLI77_03540;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584264.1;locus_tag=CLI77_03540;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000080.1 1 1101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000080.1 Genbank region 1 1101 . + . ID=NSLS01000080.1:1..1101;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000080.1 Genbank gene 1 657 . - . ID=gene-CLI77_10540;Name=CLI77_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10540;partial=true;start_range=.,1 NSLS01000080.1 GeneMarkS+ CDS 1 657 . - 0 ID=cds-PDP46800.1;Parent=gene-CLI77_10540;Dbxref=NCBI_GP:PDP46800.1;Name=PDP46800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10540;partial=true;product=hypothetical protein;protein_id=PDP46800.1;start_range=.,1;transl_table=11 NSLS01000080.1 Genbank gene 670 1056 . - . ID=gene-CLI77_10545;Name=CLI77_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10545 NSLS01000080.1 GeneMarkS+ CDS 670 1056 . - 0 ID=cds-PDP46801.1;Parent=gene-CLI77_10545;Dbxref=NCBI_GP:PDP46801.1;Name=PDP46801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10545;product=hypothetical protein;protein_id=PDP46801.1;transl_table=11 ##sequence-region NSLS01000081.1 1 1046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000081.1 Genbank region 1 1046 . + . ID=NSLS01000081.1:1..1046;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000081.1 Genbank pseudogene 45 734 . + . ID=gene-CLI77_10550;Name=CLI77_10550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10550;pseudo=true NSLS01000081.1 Protein Homology CDS 45 734 . + 0 ID=cds-CLI77_10550;Parent=gene-CLI77_10550;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_10550;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000082.1 1 1039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000082.1 Genbank region 1 1039 . + . ID=NSLS01000082.1:1..1039;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000082.1 Genbank gene 1 628 . + . ID=gene-CLI77_10555;Name=CLI77_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10555;partial=true;start_range=.,1 NSLS01000082.1 Protein Homology CDS 1 628 . + 1 ID=cds-PDP46740.1;Parent=gene-CLI77_10555;Dbxref=NCBI_GP:PDP46740.1;Name=PDP46740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10555;partial=true;product=IS3 family transposase;protein_id=PDP46740.1;start_range=.,1;transl_table=11 NSLS01000082.1 Genbank gene 711 965 . - . ID=gene-CLI77_10560;Name=CLI77_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10560 NSLS01000082.1 GeneMarkS+ CDS 711 965 . - 0 ID=cds-PDP46741.1;Parent=gene-CLI77_10560;Dbxref=NCBI_GP:PDP46741.1;Name=PDP46741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_10560;product=hypothetical protein;protein_id=PDP46741.1;transl_table=11 ##sequence-region NSLS01000083.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000083.1 Genbank region 1 1023 . + . ID=NSLS01000083.1:1..1023;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000083.1 Genbank gene 1 1023 . + . ID=gene-CLI77_10565;Name=CLI77_10565;end_range=1023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10565;partial=true;start_range=.,1 NSLS01000083.1 Protein Homology CDS 1 1023 . + 2 ID=cds-PDP46728.1;Parent=gene-CLI77_10565;Dbxref=NCBI_GP:PDP46728.1;Name=PDP46728.1;end_range=1023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_10565;partial=true;product=hemagglutinin;protein_id=PDP46728.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000084.1 1 1022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000084.1 Genbank region 1 1022 . + . ID=NSLS01000084.1:1..1022;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000085.1 1 1020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000085.1 Genbank region 1 1020 . + . ID=NSLS01000085.1:1..1020;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000085.1 Genbank pseudogene 78 1020 . + . ID=gene-CLI77_10570;Name=CLI77_10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10570;pseudo=true NSLS01000085.1 Protein Homology CDS 78 1020 . + 0 ID=cds-CLI77_10570;Parent=gene-CLI77_10570;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI77_10570;product=hemagglutinin;pseudo=true;transl_table=11 ##sequence-region NSLS01000086.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000086.1 Genbank region 1 937 . + . ID=NSLS01000086.1:1..937;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000086.1 Genbank gene 230 451 . - . ID=gene-CLI77_10575;Name=CLI77_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10575 NSLS01000086.1 Protein Homology CDS 230 451 . - 0 ID=cds-PDP46634.1;Parent=gene-CLI77_10575;Dbxref=NCBI_GP:PDP46634.1;Name=PDP46634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI77_10575;product=DUF1661 domain-containing protein;protein_id=PDP46634.1;transl_table=11 NSLS01000086.1 Genbank gene 824 937 . - . ID=gene-CLI77_10580;Name=CLI77_10580;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10580;partial=true NSLS01000086.1 Protein Homology CDS 824 937 . - 0 ID=cds-PDP46633.1;Parent=gene-CLI77_10580;Dbxref=NCBI_GP:PDP46633.1;Name=PDP46633.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI77_10580;partial=true;product=ISAs1 family transposase;protein_id=PDP46633.1;transl_table=11 ##sequence-region NSLS01000087.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000087.1 Genbank region 1 803 . + . ID=NSLS01000087.1:1..803;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000088.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000088.1 Genbank region 1 792 . + . ID=NSLS01000088.1:1..792;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000088.1 Genbank pseudogene 1 792 . - . ID=gene-CLI77_10585;Name=CLI77_10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10585;pseudo=true NSLS01000088.1 Protein Homology CDS 1 792 . - 0 ID=cds-CLI77_10585;Parent=gene-CLI77_10585;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10585;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000089.1 1 755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000089.1 Genbank region 1 755 . + . ID=NSLS01000089.1:1..755;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000089.1 Genbank gene 1 720 . - . ID=gene-CLI77_10590;Name=CLI77_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10590;partial=true;start_range=.,1 NSLS01000089.1 Protein Homology CDS 1 720 . - 0 ID=cds-PDP46556.1;Parent=gene-CLI77_10590;Dbxref=NCBI_GP:PDP46556.1;Name=PDP46556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI77_10590;partial=true;product=IS982 family transposase;protein_id=PDP46556.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000008.1 1 78348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000008.1 Genbank region 1 78348 . + . ID=NSLS01000008.1:1..78348;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000008.1 Genbank pseudogene 189 395 . + . ID=gene-CLI77_03545;Name=CLI77_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03545;pseudo=true NSLS01000008.1 Protein Homology CDS 189 395 . + 0 ID=cds-CLI77_03545;Parent=gene-CLI77_03545;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457181.1;locus_tag=CLI77_03545;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000008.1 Genbank gene 478 813 . - . ID=gene-CLI77_03550;Name=CLI77_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03550 NSLS01000008.1 Protein Homology CDS 478 813 . - 0 ID=cds-PDP49774.1;Parent=gene-CLI77_03550;Dbxref=NCBI_GP:PDP49774.1;Name=PDP49774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816102.1;locus_tag=CLI77_03550;product=hypothetical protein;protein_id=PDP49774.1;transl_table=11 NSLS01000008.1 Genbank gene 928 1404 . - . ID=gene-CLI77_03555;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CLI77_03555 NSLS01000008.1 Protein Homology CDS 928 1404 . - 0 ID=cds-PDP49775.1;Parent=gene-CLI77_03555;Dbxref=NCBI_GP:PDP49775.1;Name=PDP49775.1;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583429.1;locus_tag=CLI77_03555;product=cytidine deaminase;protein_id=PDP49775.1;transl_table=11 NSLS01000008.1 Genbank gene 1667 1740 . - . ID=gene-CLI77_03560;Name=CLI77_03560;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03560 NSLS01000008.1 tRNAscan-SE tRNA 1667 1740 . - . ID=rna-CLI77_03560;Parent=gene-CLI77_03560;anticodon=(pos:complement(1706..1708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03560;product=tRNA-Gln NSLS01000008.1 tRNAscan-SE exon 1667 1740 . - . ID=exon-CLI77_03560-1;Parent=rna-CLI77_03560;anticodon=(pos:complement(1706..1708));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03560;product=tRNA-Gln NSLS01000008.1 Genbank gene 2256 2798 . + . ID=gene-CLI77_03565;Name=CLI77_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03565 NSLS01000008.1 Protein Homology CDS 2256 2798 . + 0 ID=cds-PDP49776.1;Parent=gene-CLI77_03565;Dbxref=NCBI_GP:PDP49776.1;Name=PDP49776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965303.1;locus_tag=CLI77_03565;product=TrmH family RNA methyltransferase;protein_id=PDP49776.1;transl_table=11 NSLS01000008.1 Genbank gene 2901 3389 . - . ID=gene-CLI77_03570;Name=CLI77_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03570 NSLS01000008.1 Protein Homology CDS 2901 3389 . - 0 ID=cds-PDP49777.1;Parent=gene-CLI77_03570;Dbxref=NCBI_GP:PDP49777.1;Name=PDP49777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583426.1;locus_tag=CLI77_03570;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=PDP49777.1;transl_table=11 NSLS01000008.1 Genbank gene 3396 4571 . - . ID=gene-CLI77_03575;Name=CLI77_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03575 NSLS01000008.1 Protein Homology CDS 3396 4571 . - 0 ID=cds-PDP49778.1;Parent=gene-CLI77_03575;Dbxref=NCBI_GP:PDP49778.1;Name=PDP49778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583425.1;locus_tag=CLI77_03575;product=hypothetical protein;protein_id=PDP49778.1;transl_table=11 NSLS01000008.1 Genbank gene 4647 8123 . - . ID=gene-CLI77_03580;Name=CLI77_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03580 NSLS01000008.1 Protein Homology CDS 4647 8123 . - 0 ID=cds-PDP49779.1;Parent=gene-CLI77_03580;Dbxref=NCBI_GP:PDP49779.1;Name=PDP49779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965300.1;locus_tag=CLI77_03580;product=peptidase C25;protein_id=PDP49779.1;transl_table=11 NSLS01000008.1 Genbank gene 8136 8795 . - . ID=gene-CLI77_03585;Name=CLI77_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03585 NSLS01000008.1 Protein Homology CDS 8136 8795 . - 0 ID=cds-PDP49780.1;Parent=gene-CLI77_03585;Dbxref=NCBI_GP:PDP49780.1;Name=PDP49780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965299.1;locus_tag=CLI77_03585;product=FAA hydrolase family protein;protein_id=PDP49780.1;transl_table=11 NSLS01000008.1 Genbank gene 8864 9520 . - . ID=gene-CLI77_03590;Name=CLI77_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03590 NSLS01000008.1 Protein Homology CDS 8864 9520 . - 0 ID=cds-PDP49781.1;Parent=gene-CLI77_03590;Dbxref=NCBI_GP:PDP49781.1;Name=PDP49781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965298.1;locus_tag=CLI77_03590;product=transcriptional regulator;protein_id=PDP49781.1;transl_table=11 NSLS01000008.1 Genbank gene 10527 12203 . + . ID=gene-CLI77_03595;Name=CLI77_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03595 NSLS01000008.1 Protein Homology CDS 10527 12203 . + 0 ID=cds-PDP49782.1;Parent=gene-CLI77_03595;Dbxref=NCBI_GP:PDP49782.1;Name=PDP49782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874466.1;locus_tag=CLI77_03595;product=sodium-independent anion transporter;protein_id=PDP49782.1;transl_table=11 NSLS01000008.1 Genbank gene 12200 13201 . + . ID=gene-CLI77_03600;Name=CLI77_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03600 NSLS01000008.1 Protein Homology CDS 12200 13201 . + 0 ID=cds-PDP49783.1;Parent=gene-CLI77_03600;Dbxref=NCBI_GP:PDP49783.1;Name=PDP49783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965294.1;locus_tag=CLI77_03600;product=tRNA dihydrouridine synthase DusB;protein_id=PDP49783.1;transl_table=11 NSLS01000008.1 Genbank gene 13187 13891 . - . ID=gene-CLI77_03605;Name=CLI77_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03605 NSLS01000008.1 Protein Homology CDS 13187 13891 . - 0 ID=cds-PDP49784.1;Parent=gene-CLI77_03605;Dbxref=NCBI_GP:PDP49784.1;Name=PDP49784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874470.1;locus_tag=CLI77_03605;product=MarR family transcriptional regulator;protein_id=PDP49784.1;transl_table=11 NSLS01000008.1 Genbank gene 13976 16156 . - . ID=gene-CLI77_03610;Name=CLI77_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03610 NSLS01000008.1 Protein Homology CDS 13976 16156 . - 0 ID=cds-PDP49827.1;Parent=gene-CLI77_03610;Dbxref=NCBI_GP:PDP49827.1;Name=PDP49827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583417.1;locus_tag=CLI77_03610;product=hypothetical protein;protein_id=PDP49827.1;transl_table=11 NSLS01000008.1 Genbank gene 16226 17563 . - . ID=gene-CLI77_03615;Name=CLI77_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03615 NSLS01000008.1 Protein Homology CDS 16226 17563 . - 0 ID=cds-PDP49785.1;Parent=gene-CLI77_03615;Dbxref=NCBI_GP:PDP49785.1;Name=PDP49785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965291.1;locus_tag=CLI77_03615;product=ATP-binding protein;protein_id=PDP49785.1;transl_table=11 NSLS01000008.1 Genbank gene 17574 18923 . - . ID=gene-CLI77_03620;Name=CLI77_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03620 NSLS01000008.1 Protein Homology CDS 17574 18923 . - 0 ID=cds-PDP49786.1;Parent=gene-CLI77_03620;Dbxref=NCBI_GP:PDP49786.1;Name=PDP49786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873898.1;locus_tag=CLI77_03620;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP49786.1;transl_table=11 NSLS01000008.1 Genbank gene 19468 20238 . - . ID=gene-CLI77_03625;Name=CLI77_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03625 NSLS01000008.1 Protein Homology CDS 19468 20238 . - 0 ID=cds-PDP49787.1;Parent=gene-CLI77_03625;Dbxref=NCBI_GP:PDP49787.1;Name=PDP49787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965273.1;locus_tag=CLI77_03625;product=2-phosphosulfolactate phosphatase;protein_id=PDP49787.1;transl_table=11 NSLS01000008.1 Genbank gene 20248 21276 . - . ID=gene-CLI77_03630;Name=CLI77_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03630 NSLS01000008.1 Protein Homology CDS 20248 21276 . - 0 ID=cds-PDP49788.1;Parent=gene-CLI77_03630;Dbxref=NCBI_GP:PDP49788.1;Name=PDP49788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457167.1;locus_tag=CLI77_03630;product=L-threonine-O-3-phosphate decarboxylase;protein_id=PDP49788.1;transl_table=11 NSLS01000008.1 Genbank gene 21324 24335 . - . ID=gene-CLI77_03635;Name=CLI77_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03635 NSLS01000008.1 Protein Homology CDS 21324 24335 . - 0 ID=cds-PDP49789.1;Parent=gene-CLI77_03635;Dbxref=NCBI_GP:PDP49789.1;Name=PDP49789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457166.1;locus_tag=CLI77_03635;product=glycosyl hydrolase;protein_id=PDP49789.1;transl_table=11 NSLS01000008.1 Genbank gene 24474 27053 . - . ID=gene-CLI77_03640;Name=CLI77_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03640 NSLS01000008.1 Protein Homology CDS 24474 27053 . - 0 ID=cds-PDP49790.1;Parent=gene-CLI77_03640;Dbxref=NCBI_GP:PDP49790.1;Name=PDP49790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873897.1;locus_tag=CLI77_03640;product=Clp protease ClpC;protein_id=PDP49790.1;transl_table=11 NSLS01000008.1 Genbank gene 27681 27754 . + . ID=gene-CLI77_03645;Name=CLI77_03645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03645 NSLS01000008.1 tRNAscan-SE tRNA 27681 27754 . + . ID=rna-CLI77_03645;Parent=gene-CLI77_03645;anticodon=(pos:27715..27717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03645;product=tRNA-Asn NSLS01000008.1 tRNAscan-SE exon 27681 27754 . + . ID=exon-CLI77_03645-1;Parent=rna-CLI77_03645;anticodon=(pos:27715..27717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03645;product=tRNA-Asn NSLS01000008.1 Genbank gene 27777 27853 . + . ID=gene-CLI77_03650;Name=CLI77_03650;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03650 NSLS01000008.1 tRNAscan-SE tRNA 27777 27853 . + . ID=rna-CLI77_03650;Parent=gene-CLI77_03650;anticodon=(pos:27811..27813);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03650;product=tRNA-Asn NSLS01000008.1 tRNAscan-SE exon 27777 27853 . + . ID=exon-CLI77_03650-1;Parent=rna-CLI77_03650;anticodon=(pos:27811..27813);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03650;product=tRNA-Asn NSLS01000008.1 Genbank gene 27981 29360 . + . ID=gene-CLI77_03655;Name=CLI77_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03655 NSLS01000008.1 Protein Homology CDS 27981 29360 . + 0 ID=cds-PDP49791.1;Parent=gene-CLI77_03655;Dbxref=NCBI_GP:PDP49791.1;Name=PDP49791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965278.1;locus_tag=CLI77_03655;product=MATE family efflux transporter;protein_id=PDP49791.1;transl_table=11 NSLS01000008.1 Genbank gene 29413 30567 . + . ID=gene-CLI77_03660;Name=CLI77_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03660 NSLS01000008.1 Protein Homology CDS 29413 30567 . + 0 ID=cds-PDP49792.1;Parent=gene-CLI77_03660;Dbxref=NCBI_GP:PDP49792.1;Name=PDP49792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457162.1;locus_tag=CLI77_03660;product=phosphoesterase;protein_id=PDP49792.1;transl_table=11 NSLS01000008.1 Genbank gene 30642 31346 . - . ID=gene-CLI77_03665;Name=CLI77_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03665 NSLS01000008.1 Protein Homology CDS 30642 31346 . - 0 ID=cds-PDP49793.1;Parent=gene-CLI77_03665;Dbxref=NCBI_GP:PDP49793.1;Name=PDP49793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457161.1;locus_tag=CLI77_03665;product=NAD-dependent deacylase;protein_id=PDP49793.1;transl_table=11 NSLS01000008.1 Genbank gene 31426 32445 . + . ID=gene-CLI77_03670;Name=CLI77_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03670 NSLS01000008.1 Protein Homology CDS 31426 32445 . + 0 ID=cds-PDP49794.1;Parent=gene-CLI77_03670;Dbxref=NCBI_GP:PDP49794.1;Name=PDP49794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457160.1;locus_tag=CLI77_03670;product=acyltransferase;protein_id=PDP49794.1;transl_table=11 NSLS01000008.1 Genbank gene 32447 33019 . - . ID=gene-CLI77_03675;Name=CLI77_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03675 NSLS01000008.1 Protein Homology CDS 32447 33019 . - 0 ID=cds-PDP49795.1;Parent=gene-CLI77_03675;Dbxref=NCBI_GP:PDP49795.1;Name=PDP49795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874764.1;locus_tag=CLI77_03675;product=N-acetyltransferase;protein_id=PDP49795.1;transl_table=11 NSLS01000008.1 Genbank gene 33032 34453 . - . ID=gene-CLI77_03680;Name=CLI77_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03680 NSLS01000008.1 Protein Homology CDS 33032 34453 . - 0 ID=cds-PDP49796.1;Parent=gene-CLI77_03680;Dbxref=NCBI_GP:PDP49796.1;Name=PDP49796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583404.1;locus_tag=CLI77_03680;product=chromosomal replication initiator protein DnaA;protein_id=PDP49796.1;transl_table=11 NSLS01000008.1 Genbank pseudogene 34931 35074 . + . ID=gene-CLI77_03685;Name=CLI77_03685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03685;pseudo=true NSLS01000008.1 Protein Homology CDS 34931 35074 . + 0 ID=cds-CLI77_03685;Parent=gene-CLI77_03685;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI77_03685;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000008.1 Genbank gene 35127 35783 . - . ID=gene-CLI77_03690;Name=CLI77_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03690 NSLS01000008.1 Protein Homology CDS 35127 35783 . - 0 ID=cds-PDP49797.1;Parent=gene-CLI77_03690;Dbxref=NCBI_GP:PDP49797.1;Name=PDP49797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816730.1;locus_tag=CLI77_03690;product=hypothetical protein;protein_id=PDP49797.1;transl_table=11 NSLS01000008.1 Genbank gene 35780 38002 . - . ID=gene-CLI77_03695;Name=CLI77_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03695 NSLS01000008.1 Protein Homology CDS 35780 38002 . - 0 ID=cds-PDP49798.1;Parent=gene-CLI77_03695;Dbxref=NCBI_GP:PDP49798.1;Name=PDP49798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874760.1;locus_tag=CLI77_03695;product=hypothetical protein;protein_id=PDP49798.1;transl_table=11 NSLS01000008.1 Genbank gene 38082 38378 . - . ID=gene-CLI77_03700;Name=CLI77_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03700 NSLS01000008.1 Protein Homology CDS 38082 38378 . - 0 ID=cds-PDP49799.1;Parent=gene-CLI77_03700;Dbxref=NCBI_GP:PDP49799.1;Name=PDP49799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874754.1;locus_tag=CLI77_03700;product=transcriptional regulator;protein_id=PDP49799.1;transl_table=11 NSLS01000008.1 Genbank gene 38371 38967 . - . ID=gene-CLI77_03705;Name=CLI77_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03705 NSLS01000008.1 Protein Homology CDS 38371 38967 . - 0 ID=cds-PDP49800.1;Parent=gene-CLI77_03705;Dbxref=NCBI_GP:PDP49800.1;Name=PDP49800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816727.1;locus_tag=CLI77_03705;product=hypothetical protein;protein_id=PDP49800.1;transl_table=11 NSLS01000008.1 Genbank gene 39110 40120 . - . ID=gene-CLI77_03710;Name=CLI77_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03710 NSLS01000008.1 Protein Homology CDS 39110 40120 . - 0 ID=cds-PDP49801.1;Parent=gene-CLI77_03710;Dbxref=NCBI_GP:PDP49801.1;Name=PDP49801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965120.1;locus_tag=CLI77_03710;product=glycosyltransferase family 2 protein;protein_id=PDP49801.1;transl_table=11 NSLS01000008.1 Genbank gene 40117 41034 . - . ID=gene-CLI77_03715;Name=CLI77_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03715 NSLS01000008.1 Protein Homology CDS 40117 41034 . - 0 ID=cds-PDP49802.1;Parent=gene-CLI77_03715;Dbxref=NCBI_GP:PDP49802.1;Name=PDP49802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583398.1;locus_tag=CLI77_03715;product=acyltransferase;protein_id=PDP49802.1;transl_table=11 NSLS01000008.1 Genbank gene 41031 42365 . - . ID=gene-CLI77_03720;Name=CLI77_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03720 NSLS01000008.1 Protein Homology CDS 41031 42365 . - 0 ID=cds-PDP49803.1;Parent=gene-CLI77_03720;Dbxref=NCBI_GP:PDP49803.1;Name=PDP49803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458739.1;locus_tag=CLI77_03720;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=PDP49803.1;transl_table=11 NSLS01000008.1 Genbank gene 42499 42852 . - . ID=gene-CLI77_03725;Name=CLI77_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03725 NSLS01000008.1 Protein Homology CDS 42499 42852 . - 0 ID=cds-PDP49804.1;Parent=gene-CLI77_03725;Dbxref=NCBI_GP:PDP49804.1;Name=PDP49804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956526.1;locus_tag=CLI77_03725;product=hypothetical protein;protein_id=PDP49804.1;transl_table=11 NSLS01000008.1 Genbank gene 43115 43185 . + . ID=gene-CLI77_03730;Name=CLI77_03730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03730 NSLS01000008.1 tRNAscan-SE tRNA 43115 43185 . + . ID=rna-CLI77_03730;Parent=gene-CLI77_03730;anticodon=(pos:43147..43149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03730;product=tRNA-Cys NSLS01000008.1 tRNAscan-SE exon 43115 43185 . + . ID=exon-CLI77_03730-1;Parent=rna-CLI77_03730;anticodon=(pos:43147..43149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03730;product=tRNA-Cys NSLS01000008.1 Genbank gene 43377 44840 . - . ID=gene-CLI77_03735;Name=CLI77_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03735 NSLS01000008.1 Protein Homology CDS 43377 44840 . - 0 ID=cds-PDP49805.1;Parent=gene-CLI77_03735;Dbxref=NCBI_GP:PDP49805.1;Name=PDP49805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965117.1;locus_tag=CLI77_03735;product=potassium transporter;protein_id=PDP49805.1;transl_table=11 NSLS01000008.1 Genbank gene 44867 46207 . - . ID=gene-CLI77_03740;Name=CLI77_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03740 NSLS01000008.1 Protein Homology CDS 44867 46207 . - 0 ID=cds-PDP49806.1;Parent=gene-CLI77_03740;Dbxref=NCBI_GP:PDP49806.1;Name=PDP49806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965116.1;locus_tag=CLI77_03740;product=Trk system potassium transporter TrkA;protein_id=PDP49806.1;transl_table=11 NSLS01000008.1 Genbank gene 46261 48165 . - . ID=gene-CLI77_03745;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CLI77_03745 NSLS01000008.1 Protein Homology CDS 46261 48165 . - 0 ID=cds-PDP49807.1;Parent=gene-CLI77_03745;Dbxref=NCBI_GP:PDP49807.1;Name=PDP49807.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874298.1;locus_tag=CLI77_03745;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=PDP49807.1;transl_table=11 NSLS01000008.1 Genbank gene 48338 50068 . - . ID=gene-CLI77_03750;Name=CLI77_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03750 NSLS01000008.1 Protein Homology CDS 48338 50068 . - 0 ID=cds-PDP49808.1;Parent=gene-CLI77_03750;Dbxref=NCBI_GP:PDP49808.1;Name=PDP49808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956525.1;locus_tag=CLI77_03750;product=hypothetical protein;protein_id=PDP49808.1;transl_table=11 NSLS01000008.1 Genbank gene 50143 51228 . + . ID=gene-CLI77_03755;Name=CLI77_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03755 NSLS01000008.1 Protein Homology CDS 50143 51228 . + 0 ID=cds-PDP49809.1;Parent=gene-CLI77_03755;Dbxref=NCBI_GP:PDP49809.1;Name=PDP49809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585616.1;locus_tag=CLI77_03755;product=mannose-1-phosphate guanylyltransferase;protein_id=PDP49809.1;transl_table=11 NSLS01000008.1 Genbank gene 51263 52537 . + . ID=gene-CLI77_03760;Name=CLI77_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03760 NSLS01000008.1 Protein Homology CDS 51263 52537 . + 0 ID=cds-PDP49810.1;Parent=gene-CLI77_03760;Dbxref=NCBI_GP:PDP49810.1;Name=PDP49810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816717.1;locus_tag=CLI77_03760;product=hypothetical protein;protein_id=PDP49810.1;transl_table=11 NSLS01000008.1 Genbank gene 52809 52991 . + . ID=gene-CLI77_03765;Name=CLI77_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03765 NSLS01000008.1 Protein Homology CDS 52809 52991 . + 0 ID=cds-PDP49811.1;Parent=gene-CLI77_03765;Dbxref=NCBI_GP:PDP49811.1;Name=PDP49811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585614.1;locus_tag=CLI77_03765;product=(2Fe-2S)-binding protein;protein_id=PDP49811.1;transl_table=11 NSLS01000008.1 Genbank gene 53072 53356 . + . ID=gene-CLI77_03770;Name=CLI77_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03770 NSLS01000008.1 Protein Homology CDS 53072 53356 . + 0 ID=cds-PDP49812.1;Parent=gene-CLI77_03770;Dbxref=NCBI_GP:PDP49812.1;Name=PDP49812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956523.1;locus_tag=CLI77_03770;product=hypothetical protein;protein_id=PDP49812.1;transl_table=11 NSLS01000008.1 Genbank gene 53543 53618 . + . ID=gene-CLI77_03775;Name=CLI77_03775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03775 NSLS01000008.1 tRNAscan-SE tRNA 53543 53618 . + . ID=rna-CLI77_03775;Parent=gene-CLI77_03775;anticodon=(pos:53576..53578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03775;product=tRNA-Gly NSLS01000008.1 tRNAscan-SE exon 53543 53618 . + . ID=exon-CLI77_03775-1;Parent=rna-CLI77_03775;anticodon=(pos:53576..53578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03775;product=tRNA-Gly NSLS01000008.1 Genbank gene 53706 53791 . + . ID=gene-CLI77_03780;Name=CLI77_03780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03780 NSLS01000008.1 tRNAscan-SE tRNA 53706 53791 . + . ID=rna-CLI77_03780;Parent=gene-CLI77_03780;anticodon=(pos:53740..53742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03780;product=tRNA-Leu NSLS01000008.1 tRNAscan-SE exon 53706 53791 . + . ID=exon-CLI77_03780-1;Parent=rna-CLI77_03780;anticodon=(pos:53740..53742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03780;product=tRNA-Leu NSLS01000008.1 Genbank gene 53823 53906 . + . ID=gene-CLI77_03785;Name=CLI77_03785;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03785 NSLS01000008.1 tRNAscan-SE tRNA 53823 53906 . + . ID=rna-CLI77_03785;Parent=gene-CLI77_03785;anticodon=(pos:53857..53859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03785;product=tRNA-Leu NSLS01000008.1 tRNAscan-SE exon 53823 53906 . + . ID=exon-CLI77_03785-1;Parent=rna-CLI77_03785;anticodon=(pos:53857..53859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03785;product=tRNA-Leu NSLS01000008.1 Genbank gene 54030 56888 . + . ID=gene-CLI77_03790;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CLI77_03790 NSLS01000008.1 Protein Homology CDS 54030 56888 . + 0 ID=cds-PDP49813.1;Parent=gene-CLI77_03790;Dbxref=NCBI_GP:PDP49813.1;Name=PDP49813.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585613.1;locus_tag=CLI77_03790;product=excinuclease ABC subunit A;protein_id=PDP49813.1;transl_table=11 NSLS01000008.1 Genbank gene 56912 57166 . + . ID=gene-CLI77_03795;Name=CLI77_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03795 NSLS01000008.1 Protein Homology CDS 56912 57166 . + 0 ID=cds-PDP49814.1;Parent=gene-CLI77_03795;Dbxref=NCBI_GP:PDP49814.1;Name=PDP49814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585612.1;locus_tag=CLI77_03795;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=PDP49814.1;transl_table=11 NSLS01000008.1 Genbank gene 57417 58436 . + . ID=gene-CLI77_03800;Name=CLI77_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03800 NSLS01000008.1 Protein Homology CDS 57417 58436 . + 0 ID=cds-PDP49815.1;Parent=gene-CLI77_03800;Dbxref=NCBI_GP:PDP49815.1;Name=PDP49815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585611.1;locus_tag=CLI77_03800;product=NAD(P)-dependent oxidoreductase;protein_id=PDP49815.1;transl_table=11 NSLS01000008.1 Genbank gene 58711 60327 . + . ID=gene-CLI77_03805;Name=CLI77_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03805 NSLS01000008.1 Protein Homology CDS 58711 60327 . + 0 ID=cds-PDP49816.1;Parent=gene-CLI77_03805;Dbxref=NCBI_GP:PDP49816.1;Name=PDP49816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854824.1;locus_tag=CLI77_03805;product=ABC-F family ATPase;protein_id=PDP49816.1;transl_table=11 NSLS01000008.1 Genbank gene 60463 61407 . - . ID=gene-CLI77_03810;Name=CLI77_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03810 NSLS01000008.1 Protein Homology CDS 60463 61407 . - 0 ID=cds-PDP49817.1;Parent=gene-CLI77_03810;Dbxref=NCBI_GP:PDP49817.1;Name=PDP49817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585609.1;locus_tag=CLI77_03810;product=2-dehydropantoate 2-reductase;protein_id=PDP49817.1;transl_table=11 NSLS01000008.1 Genbank gene 61421 67144 . - . ID=gene-CLI77_03815;Name=CLI77_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03815 NSLS01000008.1 Protein Homology CDS 61421 67144 . - 0 ID=cds-PDP49818.1;Parent=gene-CLI77_03815;Dbxref=NCBI_GP:PDP49818.1;Name=PDP49818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585608.1;locus_tag=CLI77_03815;product=alpha-2-macroglobulin;protein_id=PDP49818.1;transl_table=11 NSLS01000008.1 Genbank gene 67607 68059 . + . ID=gene-CLI77_03820;Name=CLI77_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03820 NSLS01000008.1 Protein Homology CDS 67607 68059 . + 0 ID=cds-PDP49828.1;Parent=gene-CLI77_03820;Dbxref=NCBI_GP:PDP49828.1;Name=PDP49828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585606.1;locus_tag=CLI77_03820;product=Holliday junction resolvase RuvX;protein_id=PDP49828.1;transl_table=11 NSLS01000008.1 Genbank gene 68004 68735 . + . ID=gene-CLI77_03825;Name=CLI77_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03825 NSLS01000008.1 Protein Homology CDS 68004 68735 . + 0 ID=cds-PDP49819.1;Parent=gene-CLI77_03825;Dbxref=NCBI_GP:PDP49819.1;Name=PDP49819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585605.1;locus_tag=CLI77_03825;product=peptide deformylase;protein_id=PDP49819.1;transl_table=11 NSLS01000008.1 Genbank gene 68771 70858 . + . ID=gene-CLI77_03830;Name=CLI77_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03830 NSLS01000008.1 Protein Homology CDS 68771 70858 . + 0 ID=cds-PDP49820.1;Parent=gene-CLI77_03830;Dbxref=NCBI_GP:PDP49820.1;Name=PDP49820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585604.1;locus_tag=CLI77_03830;product=hypothetical protein;protein_id=PDP49820.1;transl_table=11 NSLS01000008.1 Genbank gene 70855 72792 . + . ID=gene-CLI77_03835;Name=CLI77_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03835 NSLS01000008.1 Protein Homology CDS 70855 72792 . + 0 ID=cds-PDP49821.1;Parent=gene-CLI77_03835;Dbxref=NCBI_GP:PDP49821.1;Name=PDP49821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458727.1;locus_tag=CLI77_03835;product=glycosyl transferase family 2;protein_id=PDP49821.1;transl_table=11 NSLS01000008.1 Genbank gene 73036 73917 . - . ID=gene-CLI77_03840;Name=CLI77_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03840 NSLS01000008.1 Protein Homology CDS 73036 73917 . - 0 ID=cds-PDP49822.1;Parent=gene-CLI77_03840;Dbxref=NCBI_GP:PDP49822.1;Name=PDP49822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458726.1;locus_tag=CLI77_03840;product=peptidase;protein_id=PDP49822.1;transl_table=11 NSLS01000008.1 Genbank gene 74128 74925 . - . ID=gene-CLI77_03845;Name=CLI77_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03845 NSLS01000008.1 Protein Homology CDS 74128 74925 . - 0 ID=cds-PDP49823.1;Parent=gene-CLI77_03845;Dbxref=NCBI_GP:PDP49823.1;Name=PDP49823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874288.1;locus_tag=CLI77_03845;product=peptidase M48 family protein;protein_id=PDP49823.1;transl_table=11 NSLS01000008.1 Genbank gene 75158 75952 . + . ID=gene-CLI77_03850;Name=CLI77_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03850 NSLS01000008.1 Protein Homology CDS 75158 75952 . + 0 ID=cds-PDP49824.1;Parent=gene-CLI77_03850;Dbxref=NCBI_GP:PDP49824.1;Name=PDP49824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810960.1;locus_tag=CLI77_03850;product=thymidylate synthase;protein_id=PDP49824.1;transl_table=11 NSLS01000008.1 Genbank gene 75998 76486 . + . ID=gene-CLI77_03855;Name=CLI77_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03855 NSLS01000008.1 Protein Homology CDS 75998 76486 . + 0 ID=cds-PDP49825.1;Parent=gene-CLI77_03855;Dbxref=NCBI_GP:PDP49825.1;Name=PDP49825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585598.1;locus_tag=CLI77_03855;product=dihydrofolate reductase;protein_id=PDP49825.1;transl_table=11 NSLS01000008.1 Genbank gene 76547 77911 . + . ID=gene-CLI77_03860;Name=CLI77_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03860 NSLS01000008.1 Protein Homology CDS 76547 77911 . + 0 ID=cds-PDP49826.1;Parent=gene-CLI77_03860;Dbxref=NCBI_GP:PDP49826.1;Name=PDP49826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585597.1;locus_tag=CLI77_03860;product=histidine--tRNA ligase;protein_id=PDP49826.1;transl_table=11 NSLS01000008.1 Genbank pseudogene 77916 78122 . - . ID=gene-CLI77_03865;Name=CLI77_03865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_03865;pseudo=true NSLS01000008.1 Protein Homology CDS 77916 78122 . - 0 ID=cds-CLI77_03865;Parent=gene-CLI77_03865;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458721.1;locus_tag=CLI77_03865;product=hypothetical protein;pseudo=true;transl_table=11 NSLS01000008.1 Genbank gene 78207 78320 . - . ID=gene-CLI77_03870;Name=CLI77_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03870 NSLS01000008.1 Protein Homology CDS 78207 78320 . - 0 ID=cds-PDP49829.1;Parent=gene-CLI77_03870;Dbxref=NCBI_GP:PDP49829.1;Name=PDP49829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI77_03870;product=DNA methylase;protein_id=PDP49829.1;transl_table=11 ##sequence-region NSLS01000090.1 1 739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000090.1 Genbank region 1 739 . + . ID=NSLS01000090.1:1..739;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000090.1 Genbank gene 615 739 . + . ID=gene-CLI77_10595;Name=CLI77_10595;end_range=739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10595;partial=true NSLS01000090.1 Protein Homology CDS 615 739 . + 0 ID=cds-PDP46510.1;Parent=gene-CLI77_10595;Dbxref=NCBI_GP:PDP46510.1;Name=PDP46510.1;end_range=739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583867.1;locus_tag=CLI77_10595;partial=true;product=histidinol phosphate aminotransferase;protein_id=PDP46510.1;transl_table=11 ##sequence-region NSLS01000091.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000091.1 Genbank region 1 723 . + . ID=NSLS01000091.1:1..723;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000091.1 Genbank pseudogene 164 532 . - . ID=gene-CLI77_10600;Name=CLI77_10600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10600;pseudo=true NSLS01000091.1 Protein Homology CDS 164 532 . - 0 ID=cds-CLI77_10600;Parent=gene-CLI77_10600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359405.1;locus_tag=CLI77_10600;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLS01000092.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000092.1 Genbank region 1 664 . + . ID=NSLS01000092.1:1..664;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000092.1 Genbank pseudogene 1 664 . + . ID=gene-CLI77_10605;Name=CLI77_10605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10605;pseudo=true NSLS01000092.1 Protein Homology CDS 1 664 . + 0 ID=cds-CLI77_10605;Parent=gene-CLI77_10605;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10605;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000093.1 1 614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000093.1 Genbank region 1 614 . + . ID=NSLS01000093.1:1..614;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000093.1 Genbank pseudogene 1 614 . - . ID=gene-CLI77_10610;Name=CLI77_10610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI77_10610;pseudo=true NSLS01000093.1 Protein Homology CDS 1 614 . - 0 ID=cds-CLI77_10610;Parent=gene-CLI77_10610;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10610;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLS01000094.1 1 587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000094.1 Genbank region 1 587 . + . ID=NSLS01000094.1:1..587;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000094.1 Genbank gene 1 587 . - . ID=gene-CLI77_10615;Name=CLI77_10615;end_range=587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10615;partial=true;start_range=.,1 NSLS01000094.1 Protein Homology CDS 1 587 . - 0 ID=cds-PDP46402.1;Parent=gene-CLI77_10615;Dbxref=NCBI_GP:PDP46402.1;Name=PDP46402.1;end_range=587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI77_10615;partial=true;product=peptidase C25;protein_id=PDP46402.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000095.1 1 505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000095.1 Genbank region 1 505 . + . ID=NSLS01000095.1:1..505;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 ##sequence-region NSLS01000096.1 1 501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000096.1 Genbank region 1 501 . + . ID=NSLS01000096.1:1..501;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000096.1 Genbank gene 1 212 . - . ID=gene-CLI77_10620;Name=CLI77_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10620;partial=true;start_range=.,1 NSLS01000096.1 Protein Homology CDS 1 212 . - 0 ID=cds-PDP46350.1;Parent=gene-CLI77_10620;Dbxref=NCBI_GP:PDP46350.1;Name=PDP46350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098431.1;locus_tag=CLI77_10620;partial=true;product=transcriptional regulator;protein_id=PDP46350.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000097.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000097.1 Genbank region 1 497 . + . ID=NSLS01000097.1:1..497;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000097.1 Genbank gene 1 497 . + . ID=gene-CLI77_10625;Name=CLI77_10625;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10625;partial=true;start_range=.,1 NSLS01000097.1 Protein Homology CDS 1 497 . + 0 ID=cds-PDP46324.1;Parent=gene-CLI77_10625;Dbxref=NCBI_GP:PDP46324.1;Name=PDP46324.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI77_10625;partial=true;product=peptidase;protein_id=PDP46324.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000098.1 1 497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000098.1 Genbank region 1 497 . + . ID=NSLS01000098.1:1..497;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000098.1 Genbank gene 48 497 . - . ID=gene-CLI77_10630;Name=CLI77_10630;end_range=497,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10630;partial=true NSLS01000098.1 Protein Homology CDS 48 497 . - 0 ID=cds-PDP46314.1;Parent=gene-CLI77_10630;Dbxref=NCBI_GP:PDP46314.1;Name=PDP46314.1;end_range=497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_10630;partial=true;product=IS3 family transposase;protein_id=PDP46314.1;transl_table=11 ##sequence-region NSLS01000099.1 1 484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000099.1 Genbank region 1 484 . + . ID=NSLS01000099.1:1..484;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000099.1 Genbank gene 1 196 . - . ID=gene-CLI77_10635;Name=CLI77_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_10635;partial=true;start_range=.,1 NSLS01000099.1 Protein Homology CDS 1 196 . - 0 ID=cds-PDP46280.1;Parent=gene-CLI77_10635;Dbxref=NCBI_GP:PDP46280.1;Name=PDP46280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI77_10635;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP46280.1;start_range=.,1;transl_table=11 ##sequence-region NSLS01000009.1 1 71989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLS01000009.1 Genbank region 1 71989 . + . ID=NSLS01000009.1:1..71989;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2903 NSLS01000009.1 Genbank gene 1 1256 . + . ID=gene-CLI77_03875;Name=CLI77_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03875;partial=true;start_range=.,1 NSLS01000009.1 Protein Homology CDS 1 1256 . + 2 ID=cds-PDP49701.1;Parent=gene-CLI77_03875;Dbxref=NCBI_GP:PDP49701.1;Name=PDP49701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815305.1;locus_tag=CLI77_03875;partial=true;product=peptidase C25;protein_id=PDP49701.1;start_range=.,1;transl_table=11 NSLS01000009.1 Genbank gene 1502 1578 . + . ID=gene-CLI77_03880;Name=CLI77_03880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI77_03880 NSLS01000009.1 tRNAscan-SE tRNA 1502 1578 . + . ID=rna-CLI77_03880;Parent=gene-CLI77_03880;anticodon=(pos:1536..1538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03880;product=tRNA-Asp NSLS01000009.1 tRNAscan-SE exon 1502 1578 . + . ID=exon-CLI77_03880-1;Parent=rna-CLI77_03880;anticodon=(pos:1536..1538);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI77_03880;product=tRNA-Asp NSLS01000009.1 Genbank gene 1802 2773 . + . ID=gene-CLI77_03885;Name=CLI77_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03885 NSLS01000009.1 Protein Homology CDS 1802 2773 . + 0 ID=cds-PDP49702.1;Parent=gene-CLI77_03885;Dbxref=NCBI_GP:PDP49702.1;Name=PDP49702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583663.1;locus_tag=CLI77_03885;product=methionyl-tRNA formyltransferase;protein_id=PDP49702.1;transl_table=11 NSLS01000009.1 Genbank gene 2939 5482 . + . ID=gene-CLI77_03890;Name=CLI77_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03890 NSLS01000009.1 Protein Homology CDS 2939 5482 . + 0 ID=cds-PDP49703.1;Parent=gene-CLI77_03890;Dbxref=NCBI_GP:PDP49703.1;Name=PDP49703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458651.1;locus_tag=CLI77_03890;product=hypothetical protein;protein_id=PDP49703.1;transl_table=11 NSLS01000009.1 Genbank gene 5486 7417 . + . ID=gene-CLI77_03895;Name=CLI77_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03895 NSLS01000009.1 Protein Homology CDS 5486 7417 . + 0 ID=cds-PDP49704.1;Parent=gene-CLI77_03895;Dbxref=NCBI_GP:PDP49704.1;Name=PDP49704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874862.1;locus_tag=CLI77_03895;product=arylsulfatase;protein_id=PDP49704.1;transl_table=11 NSLS01000009.1 Genbank gene 7750 7989 . + . ID=gene-CLI77_03900;Name=CLI77_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03900 NSLS01000009.1 Protein Homology CDS 7750 7989 . + 0 ID=cds-PDP49705.1;Parent=gene-CLI77_03900;Dbxref=NCBI_GP:PDP49705.1;Name=PDP49705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816245.1;locus_tag=CLI77_03900;product=hypothetical protein;protein_id=PDP49705.1;transl_table=11 NSLS01000009.1 Genbank gene 8065 8730 . + . ID=gene-CLI77_03905;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=CLI77_03905 NSLS01000009.1 Protein Homology CDS 8065 8730 . + 0 ID=cds-PDP49706.1;Parent=gene-CLI77_03905;Dbxref=NCBI_GP:PDP49706.1;Name=PDP49706.1;gbkey=CDS;gene=cas6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874856.1;locus_tag=CLI77_03905;product=CRISPR-associated endoribonuclease Cas6;protein_id=PDP49706.1;transl_table=11 NSLS01000009.1 Genbank gene 8737 9324 . + . ID=gene-CLI77_03910;Name=CLI77_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03910 NSLS01000009.1 Protein Homology CDS 8737 9324 . + 0 ID=cds-PDP49707.1;Parent=gene-CLI77_03910;Dbxref=NCBI_GP:PDP49707.1;Name=PDP49707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458648.1;locus_tag=CLI77_03910;product=hypothetical protein;protein_id=PDP49707.1;transl_table=11 NSLS01000009.1 Genbank gene 9341 11461 . + . ID=gene-CLI77_03915;Name=CLI77_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03915 NSLS01000009.1 Protein Homology CDS 9341 11461 . + 0 ID=cds-PDP49708.1;Parent=gene-CLI77_03915;Dbxref=NCBI_GP:PDP49708.1;Name=PDP49708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458647.1;locus_tag=CLI77_03915;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=PDP49708.1;transl_table=11 NSLS01000009.1 Genbank gene 11472 12767 . + . ID=gene-CLI77_03920;Name=CLI77_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03920 NSLS01000009.1 Protein Homology CDS 11472 12767 . + 0 ID=cds-PDP49709.1;Parent=gene-CLI77_03920;Dbxref=NCBI_GP:PDP49709.1;Name=PDP49709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458646.1;locus_tag=CLI77_03920;product=hypothetical protein;protein_id=PDP49709.1;transl_table=11 NSLS01000009.1 Genbank gene 12788 13846 . + . ID=gene-CLI77_03925;Name=CLI77_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03925 NSLS01000009.1 Protein Homology CDS 12788 13846 . + 0 ID=cds-PDP49710.1;Parent=gene-CLI77_03925;Dbxref=NCBI_GP:PDP49710.1;Name=PDP49710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458645.1;locus_tag=CLI77_03925;product=CRISPR-associated protein Cas7;protein_id=PDP49710.1;transl_table=11 NSLS01000009.1 Genbank gene 13963 14472 . + . ID=gene-CLI77_03930;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=CLI77_03930 NSLS01000009.1 Protein Homology CDS 13963 14472 . + 0 ID=cds-PDP49711.1;Parent=gene-CLI77_03930;Dbxref=NCBI_GP:PDP49711.1;Name=PDP49711.1;gbkey=CDS;gene=cas4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373512.1;locus_tag=CLI77_03930;product=CRISPR-associated protein Cas4;protein_id=PDP49711.1;transl_table=11 NSLS01000009.1 Genbank gene 14469 15485 . + . ID=gene-CLI77_03935;Name=CLI77_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03935 NSLS01000009.1 Protein Homology CDS 14469 15485 . + 0 ID=cds-PDP49712.1;Parent=gene-CLI77_03935;Dbxref=NCBI_GP:PDP49712.1;Name=PDP49712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874853.1;locus_tag=CLI77_03935;product=type I-B CRISPR-associated endonuclease Cas1;protein_id=PDP49712.1;transl_table=11 NSLS01000009.1 Genbank gene 15485 15748 . + . ID=gene-CLI77_03940;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CLI77_03940 NSLS01000009.1 Protein Homology CDS 15485 15748 . + 0 ID=cds-PDP49713.1;Parent=gene-CLI77_03940;Dbxref=NCBI_GP:PDP49713.1;Name=PDP49713.1;gbkey=CDS;gene=cas2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964772.1;locus_tag=CLI77_03940;product=CRISPR-associated endonuclease Cas2;protein_id=PDP49713.1;transl_table=11 NSLS01000009.1 Genbank direct_repeat 15995 21088 . + . ID=id-NSLS01000009.1:15995..21088;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=15995..16024;rpt_unit_seq=atttcaattgcaccatacaggaattaaaac NSLS01000009.1 Genbank gene 21263 23011 . - . ID=gene-CLI77_03945;Name=CLI77_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03945 NSLS01000009.1 Protein Homology CDS 21263 23011 . - 0 ID=cds-PDP49714.1;Parent=gene-CLI77_03945;Dbxref=NCBI_GP:PDP49714.1;Name=PDP49714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815290.1;locus_tag=CLI77_03945;product=phosphoglucomutase;protein_id=PDP49714.1;transl_table=11 NSLS01000009.1 Genbank gene 23084 23821 . - . ID=gene-CLI77_03950;Name=CLI77_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03950 NSLS01000009.1 Protein Homology CDS 23084 23821 . - 0 ID=cds-PDP49759.1;Parent=gene-CLI77_03950;Dbxref=NCBI_GP:PDP49759.1;Name=PDP49759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815289.1;locus_tag=CLI77_03950;product=DNA repair protein RecO;protein_id=PDP49759.1;transl_table=11 NSLS01000009.1 Genbank gene 24391 26892 . - . ID=gene-CLI77_03955;Name=CLI77_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03955 NSLS01000009.1 Protein Homology CDS 24391 26892 . - 0 ID=cds-PDP49715.1;Parent=gene-CLI77_03955;Dbxref=NCBI_GP:PDP49715.1;Name=PDP49715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815288.1;locus_tag=CLI77_03955;product=TonB-dependent receptor;protein_id=PDP49715.1;transl_table=11 NSLS01000009.1 Genbank gene 27199 27552 . - . ID=gene-CLI77_03960;Name=CLI77_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03960 NSLS01000009.1 Protein Homology CDS 27199 27552 . - 0 ID=cds-PDP49716.1;Parent=gene-CLI77_03960;Dbxref=NCBI_GP:PDP49716.1;Name=PDP49716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458635.1;locus_tag=CLI77_03960;product=hypothetical protein;protein_id=PDP49716.1;transl_table=11 NSLS01000009.1 Genbank gene 28061 29053 . + . ID=gene-CLI77_03965;Name=CLI77_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03965 NSLS01000009.1 Protein Homology CDS 28061 29053 . + 0 ID=cds-PDP49717.1;Parent=gene-CLI77_03965;Dbxref=NCBI_GP:PDP49717.1;Name=PDP49717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458633.1;locus_tag=CLI77_03965;product=putative sulfate exporter family transporter;protein_id=PDP49717.1;transl_table=11 NSLS01000009.1 Genbank gene 29197 30540 . + . ID=gene-CLI77_03970;Name=CLI77_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03970 NSLS01000009.1 Protein Homology CDS 29197 30540 . + 0 ID=cds-PDP49718.1;Parent=gene-CLI77_03970;Dbxref=NCBI_GP:PDP49718.1;Name=PDP49718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964657.1;locus_tag=CLI77_03970;product=dehydrogenase;protein_id=PDP49718.1;transl_table=11 NSLS01000009.1 Genbank gene 30601 31317 . + . ID=gene-CLI77_03975;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CLI77_03975 NSLS01000009.1 Protein Homology CDS 30601 31317 . + 0 ID=cds-PDP49719.1;Parent=gene-CLI77_03975;Dbxref=NCBI_GP:PDP49719.1;Name=PDP49719.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964658.1;locus_tag=CLI77_03975;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=PDP49719.1;transl_table=11 NSLS01000009.1 Genbank gene 31333 32730 . + . ID=gene-CLI77_03980;Name=CLI77_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03980 NSLS01000009.1 Protein Homology CDS 31333 32730 . + 0 ID=cds-PDP49720.1;Parent=gene-CLI77_03980;Dbxref=NCBI_GP:PDP49720.1;Name=PDP49720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458631.1;locus_tag=CLI77_03980;product=signal peptidase I;protein_id=PDP49720.1;transl_table=11 NSLS01000009.1 Genbank gene 32720 33346 . + . ID=gene-CLI77_03985;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI77_03985 NSLS01000009.1 Protein Homology CDS 32720 33346 . + 0 ID=cds-PDP49721.1;Parent=gene-CLI77_03985;Dbxref=NCBI_GP:PDP49721.1;Name=PDP49721.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458630.1;locus_tag=CLI77_03985;product=signal peptidase I;protein_id=PDP49721.1;transl_table=11 NSLS01000009.1 Genbank gene 33367 34005 . + . ID=gene-CLI77_03990;Name=CLI77_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03990 NSLS01000009.1 Protein Homology CDS 33367 34005 . + 0 ID=cds-PDP49722.1;Parent=gene-CLI77_03990;Dbxref=NCBI_GP:PDP49722.1;Name=PDP49722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458629.1;locus_tag=CLI77_03990;product=hypothetical protein;protein_id=PDP49722.1;transl_table=11 NSLS01000009.1 Genbank gene 34063 35037 . + . ID=gene-CLI77_03995;Name=CLI77_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_03995 NSLS01000009.1 Protein Homology CDS 34063 35037 . + 0 ID=cds-PDP49723.1;Parent=gene-CLI77_03995;Dbxref=NCBI_GP:PDP49723.1;Name=PDP49723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583648.1;locus_tag=CLI77_03995;product=polyprenyl synthetase family protein;protein_id=PDP49723.1;transl_table=11 NSLS01000009.1 Genbank gene 35352 36221 . - . ID=gene-CLI77_04000;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CLI77_04000 NSLS01000009.1 Protein Homology CDS 35352 36221 . - 0 ID=cds-PDP49724.1;Parent=gene-CLI77_04000;Dbxref=NCBI_GP:PDP49724.1;Name=PDP49724.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956466.1;locus_tag=CLI77_04000;product=deoxyribose-phosphate aldolase;protein_id=PDP49724.1;transl_table=11 NSLS01000009.1 Genbank gene 36208 36558 . - . ID=gene-CLI77_04005;Name=CLI77_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04005 NSLS01000009.1 Protein Homology CDS 36208 36558 . - 0 ID=cds-PDP49725.1;Parent=gene-CLI77_04005;Dbxref=NCBI_GP:PDP49725.1;Name=PDP49725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458625.1;locus_tag=CLI77_04005;product=pyrophosphatase;protein_id=PDP49725.1;transl_table=11 NSLS01000009.1 Genbank gene 36563 37015 . - . ID=gene-CLI77_04010;Name=CLI77_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04010 NSLS01000009.1 Protein Homology CDS 36563 37015 . - 0 ID=cds-PDP49726.1;Parent=gene-CLI77_04010;Dbxref=NCBI_GP:PDP49726.1;Name=PDP49726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815277.1;locus_tag=CLI77_04010;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=PDP49726.1;transl_table=11 NSLS01000009.1 Genbank gene 37022 38824 . - . ID=gene-CLI77_04015;Name=CLI77_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04015 NSLS01000009.1 Protein Homology CDS 37022 38824 . - 0 ID=cds-PDP49727.1;Parent=gene-CLI77_04015;Dbxref=NCBI_GP:PDP49727.1;Name=PDP49727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964667.1;locus_tag=CLI77_04015;product=excinuclease ABC subunit C;protein_id=PDP49727.1;transl_table=11 NSLS01000009.1 Genbank gene 38855 40732 . - . ID=gene-CLI77_04020;Name=CLI77_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04020 NSLS01000009.1 Protein Homology CDS 38855 40732 . - 0 ID=cds-PDP49728.1;Parent=gene-CLI77_04020;Dbxref=NCBI_GP:PDP49728.1;Name=PDP49728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583642.1;locus_tag=CLI77_04020;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=PDP49728.1;transl_table=11 NSLS01000009.1 Genbank gene 40993 41163 . + . ID=gene-CLI77_04025;Name=CLI77_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04025 NSLS01000009.1 Protein Homology CDS 40993 41163 . + 0 ID=cds-PDP49729.1;Parent=gene-CLI77_04025;Dbxref=NCBI_GP:PDP49729.1;Name=PDP49729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI77_04025;product=DUF1661 domain-containing protein;protein_id=PDP49729.1;transl_table=11 NSLS01000009.1 Genbank gene 41613 42203 . + . ID=gene-CLI77_04030;Name=CLI77_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04030 NSLS01000009.1 Protein Homology CDS 41613 42203 . + 0 ID=cds-PDP49730.1;Parent=gene-CLI77_04030;Dbxref=NCBI_GP:PDP49730.1;Name=PDP49730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815263.1;locus_tag=CLI77_04030;product=hypothetical protein;protein_id=PDP49730.1;transl_table=11 NSLS01000009.1 Genbank gene 42233 44236 . + . ID=gene-CLI77_04035;Name=CLI77_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04035 NSLS01000009.1 Protein Homology CDS 42233 44236 . + 0 ID=cds-PDP49731.1;Parent=gene-CLI77_04035;Dbxref=NCBI_GP:PDP49731.1;Name=PDP49731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815262.1;locus_tag=CLI77_04035;product=hypothetical protein;protein_id=PDP49731.1;transl_table=11 NSLS01000009.1 Genbank gene 44393 45877 . + . ID=gene-CLI77_04040;Name=CLI77_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04040 NSLS01000009.1 Protein Homology CDS 44393 45877 . + 0 ID=cds-PDP49732.1;Parent=gene-CLI77_04040;Dbxref=NCBI_GP:PDP49732.1;Name=PDP49732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01551.20;locus_tag=CLI77_04040;product=M23 family peptidase;protein_id=PDP49732.1;transl_table=11 NSLS01000009.1 Genbank gene 45874 46413 . + . ID=gene-CLI77_04045;Name=CLI77_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04045 NSLS01000009.1 GeneMarkS+ CDS 45874 46413 . + 0 ID=cds-PDP49733.1;Parent=gene-CLI77_04045;Dbxref=NCBI_GP:PDP49733.1;Name=PDP49733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04045;product=hypothetical protein;protein_id=PDP49733.1;transl_table=11 NSLS01000009.1 Genbank gene 46570 47118 . + . ID=gene-CLI77_04050;Name=CLI77_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04050 NSLS01000009.1 GeneMarkS+ CDS 46570 47118 . + 0 ID=cds-PDP49734.1;Parent=gene-CLI77_04050;Dbxref=NCBI_GP:PDP49734.1;Name=PDP49734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04050;product=hypothetical protein;protein_id=PDP49734.1;transl_table=11 NSLS01000009.1 Genbank gene 47279 47827 . + . ID=gene-CLI77_04055;Name=CLI77_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04055 NSLS01000009.1 GeneMarkS+ CDS 47279 47827 . + 0 ID=cds-PDP49735.1;Parent=gene-CLI77_04055;Dbxref=NCBI_GP:PDP49735.1;Name=PDP49735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI77_04055;product=hypothetical protein;protein_id=PDP49735.1;transl_table=11 NSLS01000009.1 Genbank gene 47944 48996 . - . ID=gene-CLI77_04060;Name=CLI77_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04060 NSLS01000009.1 Protein Homology CDS 47944 48996 . - 0 ID=cds-PDP49736.1;Parent=gene-CLI77_04060;Dbxref=NCBI_GP:PDP49736.1;Name=PDP49736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458603.1;locus_tag=CLI77_04060;product=hemagglutinin;protein_id=PDP49736.1;transl_table=11 NSLS01000009.1 Genbank gene 49336 49635 . + . ID=gene-CLI77_04065;Name=CLI77_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04065 NSLS01000009.1 Protein Homology CDS 49336 49635 . + 0 ID=cds-PDP49737.1;Parent=gene-CLI77_04065;Dbxref=NCBI_GP:PDP49737.1;Name=PDP49737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815257.1;locus_tag=CLI77_04065;product=hypothetical protein;protein_id=PDP49737.1;transl_table=11 NSLS01000009.1 Genbank gene 49604 50506 . + . ID=gene-CLI77_04070;Name=CLI77_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04070 NSLS01000009.1 Protein Homology CDS 49604 50506 . + 0 ID=cds-PDP49738.1;Parent=gene-CLI77_04070;Dbxref=NCBI_GP:PDP49738.1;Name=PDP49738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956456.1;locus_tag=CLI77_04070;product=secretion protein;protein_id=PDP49738.1;transl_table=11 NSLS01000009.1 Genbank gene 50668 50898 . - . ID=gene-CLI77_04075;Name=CLI77_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04075 NSLS01000009.1 Protein Homology CDS 50668 50898 . - 0 ID=cds-PDP49739.1;Parent=gene-CLI77_04075;Dbxref=NCBI_GP:PDP49739.1;Name=PDP49739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964683.1;locus_tag=CLI77_04075;product=hypothetical protein;protein_id=PDP49739.1;transl_table=11 NSLS01000009.1 Genbank gene 51013 51900 . - . ID=gene-CLI77_04080;Name=CLI77_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04080 NSLS01000009.1 Protein Homology CDS 51013 51900 . - 0 ID=cds-PDP49740.1;Parent=gene-CLI77_04080;Dbxref=NCBI_GP:PDP49740.1;Name=PDP49740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583634.1;locus_tag=CLI77_04080;product=hypothetical protein;protein_id=PDP49740.1;transl_table=11 NSLS01000009.1 Genbank gene 52002 53000 . + . ID=gene-CLI77_04085;Name=CLI77_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04085 NSLS01000009.1 Protein Homology CDS 52002 53000 . + 0 ID=cds-PDP49741.1;Parent=gene-CLI77_04085;Dbxref=NCBI_GP:PDP49741.1;Name=PDP49741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874833.1;locus_tag=CLI77_04085;product=mechanosensitive ion channel protein MscS;protein_id=PDP49741.1;transl_table=11 NSLS01000009.1 Genbank gene 52961 54757 . - . ID=gene-CLI77_04090;Name=CLI77_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04090 NSLS01000009.1 Protein Homology CDS 52961 54757 . - 0 ID=cds-PDP49742.1;Parent=gene-CLI77_04090;Dbxref=NCBI_GP:PDP49742.1;Name=PDP49742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583632.1;locus_tag=CLI77_04090;product=chloride channel protein;protein_id=PDP49742.1;transl_table=11 NSLS01000009.1 Genbank gene 54754 56160 . - . ID=gene-CLI77_04095;Name=CLI77_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04095 NSLS01000009.1 Protein Homology CDS 54754 56160 . - 0 ID=cds-PDP49743.1;Parent=gene-CLI77_04095;Dbxref=NCBI_GP:PDP49743.1;Name=PDP49743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583631.1;locus_tag=CLI77_04095;product=sugar transferase;protein_id=PDP49743.1;transl_table=11 NSLS01000009.1 Genbank gene 56157 56732 . - . ID=gene-CLI77_04100;Name=CLI77_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04100 NSLS01000009.1 Protein Homology CDS 56157 56732 . - 0 ID=cds-PDP49744.1;Parent=gene-CLI77_04100;Dbxref=NCBI_GP:PDP49744.1;Name=PDP49744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583630.1;locus_tag=CLI77_04100;product=threonylcarbamoyl-AMP synthase;protein_id=PDP49744.1;transl_table=11 NSLS01000009.1 Genbank gene 56858 58270 . + . ID=gene-CLI77_04105;Name=CLI77_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04105 NSLS01000009.1 Protein Homology CDS 56858 58270 . + 0 ID=cds-PDP49760.1;Parent=gene-CLI77_04105;Dbxref=NCBI_GP:PDP49760.1;Name=PDP49760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964677.1;locus_tag=CLI77_04105;product=cell filamentation protein Fic;protein_id=PDP49760.1;transl_table=11 NSLS01000009.1 Genbank gene 58551 59177 . + . ID=gene-CLI77_04110;Name=CLI77_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04110 NSLS01000009.1 Protein Homology CDS 58551 59177 . + 0 ID=cds-PDP49745.1;Parent=gene-CLI77_04110;Dbxref=NCBI_GP:PDP49745.1;Name=PDP49745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583626.1;locus_tag=CLI77_04110;product=DNA-binding protein;protein_id=PDP49745.1;transl_table=11 NSLS01000009.1 Genbank gene 59375 61642 . + . ID=gene-CLI77_04115;Name=CLI77_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04115 NSLS01000009.1 Protein Homology CDS 59375 61642 . + 0 ID=cds-PDP49746.1;Parent=gene-CLI77_04115;Dbxref=NCBI_GP:PDP49746.1;Name=PDP49746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874814.1;locus_tag=CLI77_04115;product=inorganic phosphate transporter;protein_id=PDP49746.1;transl_table=11 NSLS01000009.1 Genbank gene 61865 62104 . + . ID=gene-CLI77_04120;Name=CLI77_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04120 NSLS01000009.1 Protein Homology CDS 61865 62104 . + 0 ID=cds-PDP49747.1;Parent=gene-CLI77_04120;Dbxref=NCBI_GP:PDP49747.1;Name=PDP49747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857630.1;locus_tag=CLI77_04120;product=50S ribosomal protein L28;protein_id=PDP49747.1;transl_table=11 NSLS01000009.1 Genbank gene 62124 62312 . + . ID=gene-CLI77_04125;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CLI77_04125 NSLS01000009.1 Protein Homology CDS 62124 62312 . + 0 ID=cds-PDP49748.1;Parent=gene-CLI77_04125;Dbxref=NCBI_GP:PDP49748.1;Name=PDP49748.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013616632.1;locus_tag=CLI77_04125;product=50S ribosomal protein L33;protein_id=PDP49748.1;transl_table=11 NSLS01000009.1 Genbank gene 62331 62480 . + . ID=gene-CLI77_04130;Name=CLI77_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04130 NSLS01000009.1 Protein Homology CDS 62331 62480 . + 0 ID=cds-PDP49749.1;Parent=gene-CLI77_04130;Dbxref=NCBI_GP:PDP49749.1;Name=PDP49749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366321.1;locus_tag=CLI77_04130;product=DUF4295 domain-containing protein;protein_id=PDP49749.1;transl_table=11 NSLS01000009.1 Genbank gene 62586 62912 . + . ID=gene-CLI77_04135;Name=CLI77_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04135 NSLS01000009.1 Protein Homology CDS 62586 62912 . + 0 ID=cds-PDP49750.1;Parent=gene-CLI77_04135;Dbxref=NCBI_GP:PDP49750.1;Name=PDP49750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583620.1;locus_tag=CLI77_04135;product=hypothetical protein;protein_id=PDP49750.1;transl_table=11 NSLS01000009.1 Genbank gene 63019 64314 . + . ID=gene-CLI77_04140;Name=CLI77_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04140 NSLS01000009.1 Protein Homology CDS 63019 64314 . + 0 ID=cds-PDP49751.1;Parent=gene-CLI77_04140;Dbxref=NCBI_GP:PDP49751.1;Name=PDP49751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964697.1;locus_tag=CLI77_04140;product=4-hydroxybutyrate CoA-transferase;protein_id=PDP49751.1;transl_table=11 NSLS01000009.1 Genbank gene 65035 66054 . - . ID=gene-CLI77_04145;Name=CLI77_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04145 NSLS01000009.1 Protein Homology CDS 65035 66054 . - 0 ID=cds-PDP49752.1;Parent=gene-CLI77_04145;Dbxref=NCBI_GP:PDP49752.1;Name=PDP49752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815247.1;locus_tag=CLI77_04145;product=NAD(P)-dependent oxidoreductase;protein_id=PDP49752.1;transl_table=11 NSLS01000009.1 Genbank gene 66058 66993 . - . ID=gene-CLI77_04150;Name=CLI77_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04150 NSLS01000009.1 Protein Homology CDS 66058 66993 . - 0 ID=cds-PDP49753.1;Parent=gene-CLI77_04150;Dbxref=NCBI_GP:PDP49753.1;Name=PDP49753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583615.1;locus_tag=CLI77_04150;product=YitT family protein;protein_id=PDP49753.1;transl_table=11 NSLS01000009.1 Genbank gene 67050 67697 . - . ID=gene-CLI77_04155;Name=CLI77_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04155 NSLS01000009.1 Protein Homology CDS 67050 67697 . - 0 ID=cds-PDP49754.1;Parent=gene-CLI77_04155;Dbxref=NCBI_GP:PDP49754.1;Name=PDP49754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956453.1;locus_tag=CLI77_04155;product=DedA family protein;protein_id=PDP49754.1;transl_table=11 NSLS01000009.1 Genbank gene 67722 69422 . - . ID=gene-CLI77_04160;Name=CLI77_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04160 NSLS01000009.1 Protein Homology CDS 67722 69422 . - 0 ID=cds-PDP49755.1;Parent=gene-CLI77_04160;Dbxref=NCBI_GP:PDP49755.1;Name=PDP49755.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873878.1;locus_tag=CLI77_04160;product=glutamine--tRNA ligase;protein_id=PDP49755.1;transl_table=11 NSLS01000009.1 Genbank gene 69804 70964 . - . ID=gene-CLI77_04165;Name=CLI77_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04165 NSLS01000009.1 Protein Homology CDS 69804 70964 . - 0 ID=cds-PDP49756.1;Parent=gene-CLI77_04165;Dbxref=NCBI_GP:PDP49756.1;Name=PDP49756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873875.1;locus_tag=CLI77_04165;product=AI-2E family transporter;protein_id=PDP49756.1;transl_table=11 NSLS01000009.1 Genbank gene 70977 71255 . - . ID=gene-CLI77_04170;Name=CLI77_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04170 NSLS01000009.1 Protein Homology CDS 70977 71255 . - 0 ID=cds-PDP49757.1;Parent=gene-CLI77_04170;Dbxref=NCBI_GP:PDP49757.1;Name=PDP49757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815244.1;locus_tag=CLI77_04170;product=hypothetical protein;protein_id=PDP49757.1;transl_table=11 NSLS01000009.1 Genbank gene 71362 71989 . - . ID=gene-CLI77_04175;Name=CLI77_04175;end_range=71989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI77_04175;partial=true NSLS01000009.1 Protein Homology CDS 71362 71989 . - 1 ID=cds-PDP49758.1;Parent=gene-CLI77_04175;Dbxref=NCBI_GP:PDP49758.1;Name=PDP49758.1;end_range=71989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI77_04175;partial=true;product=IS3 family transposase;protein_id=PDP49758.1;transl_table=11 ###