##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM252935v1 #!genome-build-accession NCBI_Assembly:GCA_002529355.1 #!annotation-date 09/05/2017 11:40:35 #!annotation-source NCBI ##sequence-region NSLT01000100.1 1 2921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000100.1 Genbank region 1 2921 . + . ID=NSLT01000100.1:1..2921;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000100.1 Genbank gene 336 1442 . + . ID=gene-CLI76_10565;Name=CLI76_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10565 NSLT01000100.1 Protein Homology CDS 336 1442 . + 0 ID=cds-PDP76301.1;Parent=gene-CLI76_10565;Dbxref=NCBI_GP:PDP76301.1;Name=PDP76301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457342.1;locus_tag=CLI76_10565;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=PDP76301.1;transl_table=11 NSLT01000100.1 Genbank gene 1686 2894 . + . ID=gene-CLI76_10570;Name=CLI76_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10570 NSLT01000100.1 Protein Homology CDS 1686 2894 . + 0 ID=cds-PDP76302.1;Parent=gene-CLI76_10570;Dbxref=NCBI_GP:PDP76302.1;Name=PDP76302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815370.1;locus_tag=CLI76_10570;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=PDP76302.1;transl_table=11 ##sequence-region NSLT01000101.1 1 2795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000101.1 Genbank region 1 2795 . + . ID=NSLT01000101.1:1..2795;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000101.1 Genbank pseudogene 388 972 . + . ID=gene-CLI76_10575;Name=CLI76_10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10575;pseudo=true NSLT01000101.1 Protein Homology CDS 388 972 . + 0 ID=cds-CLI76_10575;Parent=gene-CLI76_10575;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008823896.1;locus_tag=CLI76_10575;product=tyrosine recombinase;pseudo=true;transl_table=11 NSLT01000101.1 Genbank pseudogene 1215 1592 . - . ID=gene-CLI76_10580;Name=CLI76_10580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10580;pseudo=true NSLT01000101.1 Protein Homology CDS 1215 1592 . - 0 ID=cds-CLI76_10580;Parent=gene-CLI76_10580;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10580;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLT01000101.1 Genbank gene 1697 1876 . - . ID=gene-CLI76_10585;Name=CLI76_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10585 NSLT01000101.1 Protein Homology CDS 1697 1876 . - 0 ID=cds-PDP76299.1;Parent=gene-CLI76_10585;Dbxref=NCBI_GP:PDP76299.1;Name=PDP76299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_10585;product=hypothetical protein;protein_id=PDP76299.1;transl_table=11 NSLT01000101.1 Genbank gene 2006 2795 . - . ID=gene-CLI76_10590;Name=CLI76_10590;end_range=2795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10590;partial=true NSLT01000101.1 Protein Homology CDS 2006 2795 . - 1 ID=cds-PDP76300.1;Parent=gene-CLI76_10590;Dbxref=NCBI_GP:PDP76300.1;Name=PDP76300.1;end_range=2795,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10590;partial=true;product=IS3 family transposase;protein_id=PDP76300.1;transl_table=11 ##sequence-region NSLT01000102.1 1 2767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000102.1 Genbank region 1 2767 . + . ID=NSLT01000102.1:1..2767;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000102.1 Genbank gene 1 377 . + . ID=gene-CLI76_10595;Name=CLI76_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10595;partial=true;start_range=.,1 NSLT01000102.1 GeneMarkS+ CDS 1 377 . + 2 ID=cds-PDP76296.1;Parent=gene-CLI76_10595;Dbxref=NCBI_GP:PDP76296.1;Name=PDP76296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10595;partial=true;product=hypothetical protein;protein_id=PDP76296.1;start_range=.,1;transl_table=11 NSLT01000102.1 Genbank gene 364 756 . + . ID=gene-CLI76_10600;Name=CLI76_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10600 NSLT01000102.1 Protein Homology CDS 364 756 . + 0 ID=cds-PDP76297.1;Parent=gene-CLI76_10600;Dbxref=NCBI_GP:PDP76297.1;Name=PDP76297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346459.1;locus_tag=CLI76_10600;product=hypothetical protein;protein_id=PDP76297.1;transl_table=11 NSLT01000102.1 Genbank gene 753 2767 . + . ID=gene-CLI76_10605;Name=CLI76_10605;end_range=2767,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10605;partial=true NSLT01000102.1 Protein Homology CDS 753 2767 . + 0 ID=cds-PDP76298.1;Parent=gene-CLI76_10605;Dbxref=NCBI_GP:PDP76298.1;Name=PDP76298.1;end_range=2767,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347103.1;locus_tag=CLI76_10605;partial=true;product=topoisomerase;protein_id=PDP76298.1;transl_table=11 ##sequence-region NSLT01000103.1 1 2599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000103.1 Genbank region 1 2599 . + . ID=NSLT01000103.1:1..2599;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000103.1 Genbank gene 88 675 . + . ID=gene-CLI76_10610;Name=CLI76_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10610 NSLT01000103.1 Protein Homology CDS 88 675 . + 0 ID=cds-PDP76293.1;Parent=gene-CLI76_10610;Dbxref=NCBI_GP:PDP76293.1;Name=PDP76293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816555.1;locus_tag=CLI76_10610;product=hypothetical protein;protein_id=PDP76293.1;transl_table=11 NSLT01000103.1 Genbank gene 682 1800 . + . ID=gene-CLI76_10615;Name=CLI76_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10615 NSLT01000103.1 Protein Homology CDS 682 1800 . + 0 ID=cds-PDP76294.1;Parent=gene-CLI76_10615;Dbxref=NCBI_GP:PDP76294.1;Name=PDP76294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816556.1;locus_tag=CLI76_10615;product=hypothetical protein;protein_id=PDP76294.1;transl_table=11 NSLT01000103.1 Genbank gene 1813 2599 . + . ID=gene-CLI76_10620;Name=CLI76_10620;end_range=2599,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10620;partial=true NSLT01000103.1 Protein Homology CDS 1813 2599 . + 0 ID=cds-PDP76295.1;Parent=gene-CLI76_10620;Dbxref=NCBI_GP:PDP76295.1;Name=PDP76295.1;end_range=2599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816557.1;locus_tag=CLI76_10620;partial=true;product=DNA modification methylase;protein_id=PDP76295.1;transl_table=11 ##sequence-region NSLT01000104.1 1 2407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000104.1 Genbank region 1 2407 . + . ID=NSLT01000104.1:1..2407;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000104.1 Genbank pseudogene 7 123 . - . ID=gene-CLI76_10625;Name=CLI76_10625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10625;pseudo=true NSLT01000104.1 Protein Homology CDS 7 123 . - 0 ID=cds-CLI76_10625;Parent=gene-CLI76_10625;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004323413.1;locus_tag=CLI76_10625;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000104.1 Genbank gene 104 1777 . - . ID=gene-CLI76_10630;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=CLI76_10630 NSLT01000104.1 Protein Homology CDS 104 1777 . - 0 ID=cds-PDP76292.1;Parent=gene-CLI76_10630;Dbxref=NCBI_GP:PDP76292.1;Name=PDP76292.1;gbkey=CDS;gene=ltrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005840044.1;locus_tag=CLI76_10630;product=group II intron reverse transcriptase/maturase;protein_id=PDP76292.1;transl_table=11 NSLT01000104.1 Genbank pseudogene 1857 2058 . + . ID=gene-CLI76_10635;Name=CLI76_10635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10635;pseudo=true NSLT01000104.1 Protein Homology CDS 1857 2058 . + 0 ID=cds-CLI76_10635;Parent=gene-CLI76_10635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005655096.1;locus_tag=CLI76_10635;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000105.1 1 2336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000105.1 Genbank region 1 2336 . + . ID=NSLT01000105.1:1..2336;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000105.1 Genbank gene 595 1782 . - . ID=gene-CLI76_10640;Name=CLI76_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10640 NSLT01000105.1 Protein Homology CDS 595 1782 . - 0 ID=cds-PDP76290.1;Parent=gene-CLI76_10640;Dbxref=NCBI_GP:PDP76290.1;Name=PDP76290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04326.12%2CHMM:PF13749.4;locus_tag=CLI76_10640;product=ATP-dependent DNA helicase RecG;protein_id=PDP76290.1;transl_table=11 NSLT01000105.1 Genbank gene 1761 2336 . - . ID=gene-CLI76_10645;Name=CLI76_10645;end_range=2336,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10645;partial=true NSLT01000105.1 GeneMarkS+ CDS 1761 2336 . - 0 ID=cds-PDP76291.1;Parent=gene-CLI76_10645;Dbxref=NCBI_GP:PDP76291.1;Name=PDP76291.1;end_range=2336,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10645;partial=true;product=hypothetical protein;protein_id=PDP76291.1;transl_table=11 ##sequence-region NSLT01000106.1 1 2302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000106.1 Genbank region 1 2302 . + . ID=NSLT01000106.1:1..2302;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000106.1 Genbank gene 557 1024 . + . ID=gene-CLI76_10650;Name=CLI76_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10650 NSLT01000106.1 Protein Homology CDS 557 1024 . + 0 ID=cds-PDP76286.1;Parent=gene-CLI76_10650;Dbxref=NCBI_GP:PDP76286.1;Name=PDP76286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583867.1;locus_tag=CLI76_10650;product=histidinol phosphate aminotransferase;protein_id=PDP76286.1;transl_table=11 NSLT01000106.1 Genbank gene 1103 1330 . + . ID=gene-CLI76_10655;Name=CLI76_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10655 NSLT01000106.1 Protein Homology CDS 1103 1330 . + 0 ID=cds-PDP76287.1;Parent=gene-CLI76_10655;Dbxref=NCBI_GP:PDP76287.1;Name=PDP76287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965082.1;locus_tag=CLI76_10655;product=hypothetical protein;protein_id=PDP76287.1;transl_table=11 NSLT01000106.1 Genbank gene 1333 1785 . + . ID=gene-CLI76_10660;Name=CLI76_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10660 NSLT01000106.1 GeneMarkS+ CDS 1333 1785 . + 0 ID=cds-PDP76288.1;Parent=gene-CLI76_10660;Dbxref=NCBI_GP:PDP76288.1;Name=PDP76288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10660;product=hypothetical protein;protein_id=PDP76288.1;transl_table=11 NSLT01000106.1 Genbank gene 1803 2302 . + . ID=gene-CLI76_10665;Name=CLI76_10665;end_range=2302,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10665;partial=true NSLT01000106.1 GeneMarkS+ CDS 1803 2302 . + 0 ID=cds-PDP76289.1;Parent=gene-CLI76_10665;Dbxref=NCBI_GP:PDP76289.1;Name=PDP76289.1;end_range=2302,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10665;partial=true;product=hypothetical protein;protein_id=PDP76289.1;transl_table=11 ##sequence-region NSLT01000107.1 1 2175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000107.1 Genbank region 1 2175 . + . ID=NSLT01000107.1:1..2175;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000107.1 Genbank gene 1 2175 . - . ID=gene-CLI76_10670;Name=CLI76_10670;end_range=2175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10670;partial=true;start_range=.,1 NSLT01000107.1 Protein Homology CDS 1 2175 . - 2 ID=cds-PDP76285.1;Parent=gene-CLI76_10670;Dbxref=NCBI_GP:PDP76285.1;Name=PDP76285.1;end_range=2175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956476.1;locus_tag=CLI76_10670;partial=true;product=peptidase C25;protein_id=PDP76285.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000108.1 1 2088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000108.1 Genbank region 1 2088 . + . ID=NSLT01000108.1:1..2088;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000108.1 Genbank gene 1 1207 . - . ID=gene-CLI76_10675;Name=CLI76_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10675;partial=true;start_range=.,1 NSLT01000108.1 Protein Homology CDS 1 1207 . - 0 ID=cds-PDP76282.1;Parent=gene-CLI76_10675;Dbxref=NCBI_GP:PDP76282.1;Name=PDP76282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358015.1;locus_tag=CLI76_10675;partial=true;product=DEAD/DEAH box helicase;protein_id=PDP76282.1;start_range=.,1;transl_table=11 NSLT01000108.1 Genbank gene 1239 1559 . - . ID=gene-CLI76_10680;Name=CLI76_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10680 NSLT01000108.1 Protein Homology CDS 1239 1559 . - 0 ID=cds-PDP76283.1;Parent=gene-CLI76_10680;Dbxref=NCBI_GP:PDP76283.1;Name=PDP76283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098431.1;locus_tag=CLI76_10680;product=XRE family transcriptional regulator;protein_id=PDP76283.1;transl_table=11 NSLT01000108.1 Genbank gene 1629 2088 . - . ID=gene-CLI76_10685;Name=CLI76_10685;end_range=2088,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10685;partial=true NSLT01000108.1 Protein Homology CDS 1629 2088 . - 1 ID=cds-PDP76284.1;Parent=gene-CLI76_10685;Dbxref=NCBI_GP:PDP76284.1;Name=PDP76284.1;end_range=2088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956143.1;locus_tag=CLI76_10685;partial=true;product=toxin HipA;protein_id=PDP76284.1;transl_table=11 ##sequence-region NSLT01000109.1 1 2054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000109.1 Genbank region 1 2054 . + . ID=NSLT01000109.1:1..2054;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000109.1 Genbank gene 1 1695 . - . ID=gene-CLI76_10690;Name=CLI76_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10690;partial=true;start_range=.,1 NSLT01000109.1 Protein Homology CDS 1 1695 . - 0 ID=cds-PDP76280.1;Parent=gene-CLI76_10690;Dbxref=NCBI_GP:PDP76280.1;Name=PDP76280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364211.1;locus_tag=CLI76_10690;partial=true;product=conjugal transfer protein TraG;protein_id=PDP76280.1;start_range=.,1;transl_table=11 NSLT01000109.1 Genbank gene 1697 2054 . - . ID=gene-CLI76_10695;Name=CLI76_10695;end_range=2054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10695;partial=true NSLT01000109.1 Protein Homology CDS 1697 2054 . - 1 ID=cds-PDP76281.1;Parent=gene-CLI76_10695;Dbxref=NCBI_GP:PDP76281.1;Name=PDP76281.1;end_range=2054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI76_10695;partial=true;product=relaxase;protein_id=PDP76281.1;transl_table=11 ##sequence-region NSLT01000010.1 1 53027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000010.1 Genbank region 1 53027 . + . ID=NSLT01000010.1:1..53027;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000010.1 Genbank pseudogene 129 1445 . - . ID=gene-CLI76_03075;Name=CLI76_03075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03075;pseudo=true NSLT01000010.1 Protein Homology CDS 129 1445 . - 0 ID=cds-CLI76_03075;Parent=gene-CLI76_03075;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874617.1;locus_tag=CLI76_03075;product=competence protein ComEC;pseudo=true;transl_table=11 NSLT01000010.1 Genbank gene 1452 2108 . - . ID=gene-CLI76_03080;Name=CLI76_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03080 NSLT01000010.1 Protein Homology CDS 1452 2108 . - 0 ID=cds-PDP77617.1;Parent=gene-CLI76_03080;Dbxref=NCBI_GP:PDP77617.1;Name=PDP77617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584057.1;locus_tag=CLI76_03080;product=ribulose-phosphate 3-epimerase;protein_id=PDP77617.1;transl_table=11 NSLT01000010.1 Genbank gene 2450 5863 . + . ID=gene-CLI76_03085;Name=CLI76_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03085 NSLT01000010.1 Protein Homology CDS 2450 5863 . + 0 ID=cds-PDP77618.1;Parent=gene-CLI76_03085;Dbxref=NCBI_GP:PDP77618.1;Name=PDP77618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874631.1;locus_tag=CLI76_03085;product=isoleucine--tRNA ligase;protein_id=PDP77618.1;transl_table=11 NSLT01000010.1 Genbank gene 5933 6313 . + . ID=gene-CLI76_03090;Name=CLI76_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03090 NSLT01000010.1 Protein Homology CDS 5933 6313 . + 0 ID=cds-PDP77619.1;Parent=gene-CLI76_03090;Dbxref=NCBI_GP:PDP77619.1;Name=PDP77619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842933.1;locus_tag=CLI76_03090;product=molecular chaperone DnaK;protein_id=PDP77619.1;transl_table=11 NSLT01000010.1 Genbank gene 6317 6997 . + . ID=gene-CLI76_03095;Name=CLI76_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03095 NSLT01000010.1 Protein Homology CDS 6317 6997 . + 0 ID=cds-PDP77620.1;Parent=gene-CLI76_03095;Dbxref=NCBI_GP:PDP77620.1;Name=PDP77620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584054.1;locus_tag=CLI76_03095;product=lipoprotein signal peptidase;protein_id=PDP77620.1;transl_table=11 NSLT01000010.1 Genbank gene 6994 7782 . + . ID=gene-CLI76_03100;Name=CLI76_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03100 NSLT01000010.1 Protein Homology CDS 6994 7782 . + 0 ID=cds-PDP77621.1;Parent=gene-CLI76_03100;Dbxref=NCBI_GP:PDP77621.1;Name=PDP77621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815602.1;locus_tag=CLI76_03100;product=hypothetical protein;protein_id=PDP77621.1;transl_table=11 NSLT01000010.1 Genbank gene 7816 8841 . - . ID=gene-CLI76_03105;Name=CLI76_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03105 NSLT01000010.1 Protein Homology CDS 7816 8841 . - 0 ID=cds-PDP77622.1;Parent=gene-CLI76_03105;Dbxref=NCBI_GP:PDP77622.1;Name=PDP77622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965588.1;locus_tag=CLI76_03105;product=acyltransferase;protein_id=PDP77622.1;transl_table=11 NSLT01000010.1 Genbank gene 8876 9649 . - . ID=gene-CLI76_03110;Name=CLI76_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03110 NSLT01000010.1 Protein Homology CDS 8876 9649 . - 0 ID=cds-PDP77623.1;Parent=gene-CLI76_03110;Dbxref=NCBI_GP:PDP77623.1;Name=PDP77623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584051.1;locus_tag=CLI76_03110;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=PDP77623.1;transl_table=11 NSLT01000010.1 Genbank gene 9621 10001 . - . ID=gene-CLI76_03115;Name=CLI76_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03115 NSLT01000010.1 Protein Homology CDS 9621 10001 . - 0 ID=cds-PDP77624.1;Parent=gene-CLI76_03115;Dbxref=NCBI_GP:PDP77624.1;Name=PDP77624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965590.1;locus_tag=CLI76_03115;product=hypothetical protein;protein_id=PDP77624.1;transl_table=11 NSLT01000010.1 Genbank gene 10072 10656 . + . ID=gene-CLI76_03120;Name=CLI76_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03120 NSLT01000010.1 Protein Homology CDS 10072 10656 . + 0 ID=cds-PDP77625.1;Parent=gene-CLI76_03120;Dbxref=NCBI_GP:PDP77625.1;Name=PDP77625.1;Note=hydrolyzes non-standard nucleotides such as xanthine and inosine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965591.1;locus_tag=CLI76_03120;product=non-canonical purine NTP diphosphatase;protein_id=PDP77625.1;transl_table=11 NSLT01000010.1 Genbank gene 10644 12974 . + . ID=gene-CLI76_03125;Name=CLI76_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03125 NSLT01000010.1 Protein Homology CDS 10644 12974 . + 0 ID=cds-PDP77626.1;Parent=gene-CLI76_03125;Dbxref=NCBI_GP:PDP77626.1;Name=PDP77626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956350.1;locus_tag=CLI76_03125;product=hypothetical protein;protein_id=PDP77626.1;transl_table=11 NSLT01000010.1 Genbank gene 13026 14429 . + . ID=gene-CLI76_03130;Name=CLI76_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03130 NSLT01000010.1 Protein Homology CDS 13026 14429 . + 0 ID=cds-PDP77627.1;Parent=gene-CLI76_03130;Dbxref=NCBI_GP:PDP77627.1;Name=PDP77627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457563.1;locus_tag=CLI76_03130;product=aminopeptidase;protein_id=PDP77627.1;transl_table=11 NSLT01000010.1 Genbank gene 14756 15478 . - . ID=gene-CLI76_03135;Name=CLI76_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03135 NSLT01000010.1 Protein Homology CDS 14756 15478 . - 0 ID=cds-PDP77628.1;Parent=gene-CLI76_03135;Dbxref=NCBI_GP:PDP77628.1;Name=PDP77628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457562.1;locus_tag=CLI76_03135;product=ion transporter;protein_id=PDP77628.1;transl_table=11 NSLT01000010.1 Genbank gene 16540 17691 . - . ID=gene-CLI76_03140;Name=CLI76_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03140 NSLT01000010.1 Protein Homology CDS 16540 17691 . - 0 ID=cds-PDP77629.1;Parent=gene-CLI76_03140;Dbxref=NCBI_GP:PDP77629.1;Name=PDP77629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584039.1;locus_tag=CLI76_03140;product=sodium ion-translocating decarboxylase subunit beta;protein_id=PDP77629.1;transl_table=11 NSLT01000010.1 Genbank gene 17696 18130 . - . ID=gene-CLI76_03145;Name=CLI76_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03145 NSLT01000010.1 Protein Homology CDS 17696 18130 . - 0 ID=cds-PDP77630.1;Parent=gene-CLI76_03145;Dbxref=NCBI_GP:PDP77630.1;Name=PDP77630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965432.1;locus_tag=CLI76_03145;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=PDP77630.1;transl_table=11 NSLT01000010.1 Genbank gene 18168 18404 . - . ID=gene-CLI76_03150;Name=CLI76_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03150 NSLT01000010.1 Protein Homology CDS 18168 18404 . - 0 ID=cds-PDP77631.1;Parent=gene-CLI76_03150;Dbxref=NCBI_GP:PDP77631.1;Name=PDP77631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965431.1;locus_tag=CLI76_03150;product=hypothetical protein;protein_id=PDP77631.1;transl_table=11 NSLT01000010.1 Genbank gene 18401 19342 . - . ID=gene-CLI76_03155;Name=CLI76_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03155 NSLT01000010.1 Protein Homology CDS 18401 19342 . - 0 ID=cds-PDP77632.1;Parent=gene-CLI76_03155;Dbxref=NCBI_GP:PDP77632.1;Name=PDP77632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584036.1;locus_tag=CLI76_03155;product=phage tail protein;protein_id=PDP77632.1;transl_table=11 NSLT01000010.1 Genbank gene 19367 20920 . - . ID=gene-CLI76_03160;Name=CLI76_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03160 NSLT01000010.1 Protein Homology CDS 19367 20920 . - 0 ID=cds-PDP77633.1;Parent=gene-CLI76_03160;Dbxref=NCBI_GP:PDP77633.1;Name=PDP77633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100567.1;locus_tag=CLI76_03160;product=methylmalonyl-CoA carboxyltransferase;protein_id=PDP77633.1;transl_table=11 NSLT01000010.1 Genbank gene 21019 21423 . - . ID=gene-CLI76_03165;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=CLI76_03165 NSLT01000010.1 Protein Homology CDS 21019 21423 . - 0 ID=cds-PDP77634.1;Parent=gene-CLI76_03165;Dbxref=NCBI_GP:PDP77634.1;Name=PDP77634.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584034.1;locus_tag=CLI76_03165;product=methylmalonyl-CoA epimerase;protein_id=PDP77634.1;transl_table=11 NSLT01000010.1 Genbank gene 21655 22410 . - . ID=gene-CLI76_03170;Name=CLI76_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03170 NSLT01000010.1 Protein Homology CDS 21655 22410 . - 0 ID=cds-PDP77635.1;Parent=gene-CLI76_03170;Dbxref=NCBI_GP:PDP77635.1;Name=PDP77635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467429.1;locus_tag=CLI76_03170;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=PDP77635.1;transl_table=11 NSLT01000010.1 Genbank gene 22439 24382 . - . ID=gene-CLI76_03175;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CLI76_03175 NSLT01000010.1 Protein Homology CDS 22439 24382 . - 0 ID=cds-PDP77636.1;Parent=gene-CLI76_03175;Dbxref=NCBI_GP:PDP77636.1;Name=PDP77636.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467428.1;locus_tag=CLI76_03175;product=succinate dehydrogenase flavoprotein subunit;protein_id=PDP77636.1;transl_table=11 NSLT01000010.1 Genbank gene 24413 25105 . - . ID=gene-CLI76_03180;Name=CLI76_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03180 NSLT01000010.1 Protein Homology CDS 24413 25105 . - 0 ID=cds-PDP77637.1;Parent=gene-CLI76_03180;Dbxref=NCBI_GP:PDP77637.1;Name=PDP77637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584031.1;locus_tag=CLI76_03180;product=succinate dehydrogenase/fumarate reductase cytochrome b subunit;protein_id=PDP77637.1;transl_table=11 NSLT01000010.1 Genbank gene 25152 25544 . - . ID=gene-CLI76_03185;Name=CLI76_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03185 NSLT01000010.1 Protein Homology CDS 25152 25544 . - 0 ID=cds-PDP77638.1;Parent=gene-CLI76_03185;Dbxref=NCBI_GP:PDP77638.1;Name=PDP77638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815589.1;locus_tag=CLI76_03185;product=hypothetical protein;protein_id=PDP77638.1;transl_table=11 NSLT01000010.1 Genbank gene 25832 26095 . + . ID=gene-CLI76_03190;Name=CLI76_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03190 NSLT01000010.1 Protein Homology CDS 25832 26095 . + 0 ID=cds-PDP77639.1;Parent=gene-CLI76_03190;Dbxref=NCBI_GP:PDP77639.1;Name=PDP77639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874447.1;locus_tag=CLI76_03190;product=cation transporter;protein_id=PDP77639.1;transl_table=11 NSLT01000010.1 Genbank gene 26131 28338 . + . ID=gene-CLI76_03195;Name=CLI76_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03195 NSLT01000010.1 Protein Homology CDS 26131 28338 . + 0 ID=cds-PDP77640.1;Parent=gene-CLI76_03195;Dbxref=NCBI_GP:PDP77640.1;Name=PDP77640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874448.1;locus_tag=CLI76_03195;product=copper-translocating P-type ATPase;protein_id=PDP77640.1;transl_table=11 NSLT01000010.1 Genbank gene 28346 28849 . + . ID=gene-CLI76_03200;Name=CLI76_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03200 NSLT01000010.1 Protein Homology CDS 28346 28849 . + 0 ID=cds-PDP77641.1;Parent=gene-CLI76_03200;Dbxref=NCBI_GP:PDP77641.1;Name=PDP77641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457551.1;locus_tag=CLI76_03200;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=PDP77641.1;transl_table=11 NSLT01000010.1 Genbank gene 28840 30174 . + . ID=gene-CLI76_03205;Name=CLI76_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03205 NSLT01000010.1 Protein Homology CDS 28840 30174 . + 0 ID=cds-PDP77642.1;Parent=gene-CLI76_03205;Dbxref=NCBI_GP:PDP77642.1;Name=PDP77642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874446.1;locus_tag=CLI76_03205;product=MATE family efflux transporter;protein_id=PDP77642.1;transl_table=11 NSLT01000010.1 Genbank gene 30330 31445 . + . ID=gene-CLI76_03210;Name=CLI76_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03210 NSLT01000010.1 Protein Homology CDS 30330 31445 . + 0 ID=cds-PDP77643.1;Parent=gene-CLI76_03210;Dbxref=NCBI_GP:PDP77643.1;Name=PDP77643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584024.1;locus_tag=CLI76_03210;product=thiol:disulfide interchange protein;protein_id=PDP77643.1;transl_table=11 NSLT01000010.1 Genbank gene 31753 34233 . + . ID=gene-CLI76_03215;Name=CLI76_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03215 NSLT01000010.1 Protein Homology CDS 31753 34233 . + 0 ID=cds-PDP77644.1;Parent=gene-CLI76_03215;Dbxref=NCBI_GP:PDP77644.1;Name=PDP77644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815582.1;locus_tag=CLI76_03215;product=cell division protein FtsK;protein_id=PDP77644.1;transl_table=11 NSLT01000010.1 Genbank gene 34247 34894 . + . ID=gene-CLI76_03220;Name=CLI76_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03220 NSLT01000010.1 Protein Homology CDS 34247 34894 . + 0 ID=cds-PDP77645.1;Parent=gene-CLI76_03220;Dbxref=NCBI_GP:PDP77645.1;Name=PDP77645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584022.1;locus_tag=CLI76_03220;product=hypothetical protein;protein_id=PDP77645.1;transl_table=11 NSLT01000010.1 Genbank gene 34960 35385 . + . ID=gene-CLI76_03225;Name=CLI76_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03225 NSLT01000010.1 Protein Homology CDS 34960 35385 . + 0 ID=cds-PDP77646.1;Parent=gene-CLI76_03225;Dbxref=NCBI_GP:PDP77646.1;Name=PDP77646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457547.1;locus_tag=CLI76_03225;product=hypothetical protein;protein_id=PDP77646.1;transl_table=11 NSLT01000010.1 Genbank gene 35518 36672 . - . ID=gene-CLI76_03230;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CLI76_03230 NSLT01000010.1 Protein Homology CDS 35518 36672 . - 0 ID=cds-PDP77647.1;Parent=gene-CLI76_03230;Dbxref=NCBI_GP:PDP77647.1;Name=PDP77647.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809283.1;locus_tag=CLI76_03230;product=galactokinase;protein_id=PDP77647.1;transl_table=11 NSLT01000010.1 Genbank gene 36722 37789 . - . ID=gene-CLI76_03235;Name=CLI76_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03235 NSLT01000010.1 Protein Homology CDS 36722 37789 . - 0 ID=cds-PDP77648.1;Parent=gene-CLI76_03235;Dbxref=NCBI_GP:PDP77648.1;Name=PDP77648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815579.1;locus_tag=CLI76_03235;product=galactose-1-epimerase;protein_id=PDP77648.1;transl_table=11 NSLT01000010.1 Genbank gene 37997 38626 . - . ID=gene-CLI76_03240;Name=CLI76_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03240 NSLT01000010.1 Protein Homology CDS 37997 38626 . - 0 ID=cds-PDP77649.1;Parent=gene-CLI76_03240;Dbxref=NCBI_GP:PDP77649.1;Name=PDP77649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457544.1;locus_tag=CLI76_03240;product=hypothetical protein;protein_id=PDP77649.1;transl_table=11 NSLT01000010.1 Genbank pseudogene 38938 39281 . + . ID=gene-CLI76_03245;Name=CLI76_03245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03245;pseudo=true NSLT01000010.1 Protein Homology CDS 38938 39281 . + 0 ID=cds-CLI76_03245;Parent=gene-CLI76_03245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955941.1;locus_tag=CLI76_03245;product=IS4 family transposase;pseudo=true;transl_table=11 NSLT01000010.1 Genbank pseudogene 40258 40413 . + . ID=gene-CLI76_03250;Name=CLI76_03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03250;pseudo=true NSLT01000010.1 Protein Homology CDS 40258 40413 . + 0 ID=cds-CLI76_03250;Parent=gene-CLI76_03250;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955941.1;locus_tag=CLI76_03250;product=IS4 family transposase;pseudo=true;transl_table=11 NSLT01000010.1 Genbank gene 40706 42370 . - . ID=gene-CLI76_03255;Name=CLI76_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03255 NSLT01000010.1 Protein Homology CDS 40706 42370 . - 0 ID=cds-PDP77650.1;Parent=gene-CLI76_03255;Dbxref=NCBI_GP:PDP77650.1;Name=PDP77650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584013.1;locus_tag=CLI76_03255;product=transporter;protein_id=PDP77650.1;transl_table=11 NSLT01000010.1 Genbank gene 42475 43680 . - . ID=gene-CLI76_03260;Name=CLI76_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03260 NSLT01000010.1 Protein Homology CDS 42475 43680 . - 0 ID=cds-PDP77651.1;Parent=gene-CLI76_03260;Dbxref=NCBI_GP:PDP77651.1;Name=PDP77651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815572.1;locus_tag=CLI76_03260;product=hypothetical protein;protein_id=PDP77651.1;transl_table=11 NSLT01000010.1 Genbank pseudogene 43797 44246 . - . ID=gene-CLI76_03265;Name=CLI76_03265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03265;pseudo=true NSLT01000010.1 Protein Homology CDS 43797 44246 . - 0 ID=cds-CLI76_03265;Parent=gene-CLI76_03265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457537.1;locus_tag=CLI76_03265;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000010.1 Genbank gene 44460 45650 . + . ID=gene-CLI76_03270;Name=CLI76_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03270 NSLT01000010.1 Protein Homology CDS 44460 45650 . + 0 ID=cds-PDP77652.1;Parent=gene-CLI76_03270;Dbxref=NCBI_GP:PDP77652.1;Name=PDP77652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874541.1;locus_tag=CLI76_03270;product=hypothetical protein;protein_id=PDP77652.1;transl_table=11 NSLT01000010.1 Genbank gene 45708 48404 . + . ID=gene-CLI76_03275;Name=CLI76_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03275 NSLT01000010.1 Protein Homology CDS 45708 48404 . + 0 ID=cds-PDP77653.1;Parent=gene-CLI76_03275;Dbxref=NCBI_GP:PDP77653.1;Name=PDP77653.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584007.1;locus_tag=CLI76_03275;product=DNA topoisomerase IV;protein_id=PDP77653.1;transl_table=11 NSLT01000010.1 Genbank gene 48391 49338 . + . ID=gene-CLI76_03280;Name=CLI76_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03280 NSLT01000010.1 Protein Homology CDS 48391 49338 . + 0 ID=cds-PDP77654.1;Parent=gene-CLI76_03280;Dbxref=NCBI_GP:PDP77654.1;Name=PDP77654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956355.1;locus_tag=CLI76_03280;product=hypothetical protein;protein_id=PDP77654.1;transl_table=11 NSLT01000010.1 Genbank gene 49331 50407 . + . ID=gene-CLI76_03285;Name=CLI76_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03285 NSLT01000010.1 Protein Homology CDS 49331 50407 . + 0 ID=cds-PDP77655.1;Parent=gene-CLI76_03285;Dbxref=NCBI_GP:PDP77655.1;Name=PDP77655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457532.1;locus_tag=CLI76_03285;product=peptidase S41;protein_id=PDP77655.1;transl_table=11 NSLT01000010.1 Genbank gene 50437 51204 . - . ID=gene-CLI76_03290;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CLI76_03290 NSLT01000010.1 Protein Homology CDS 50437 51204 . - 0 ID=cds-PDP77656.1;Parent=gene-CLI76_03290;Dbxref=NCBI_GP:PDP77656.1;Name=PDP77656.1;gbkey=CDS;gene=bioC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965132.1;locus_tag=CLI76_03290;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=PDP77656.1;transl_table=11 NSLT01000010.1 Genbank gene 51183 51935 . - . ID=gene-CLI76_03295;Name=CLI76_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03295 NSLT01000010.1 Protein Homology CDS 51183 51935 . - 0 ID=cds-PDP77657.1;Parent=gene-CLI76_03295;Dbxref=NCBI_GP:PDP77657.1;Name=PDP77657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874588.1;locus_tag=CLI76_03295;product=DUF452 domain-containing protein;protein_id=PDP77657.1;transl_table=11 NSLT01000010.1 Genbank gene 52238 53027 . - . ID=gene-CLI76_03300;Name=CLI76_03300;end_range=53027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03300;partial=true NSLT01000010.1 Protein Homology CDS 52238 53027 . - 1 ID=cds-PDP77658.1;Parent=gene-CLI76_03300;Dbxref=NCBI_GP:PDP77658.1;Name=PDP77658.1;end_range=53027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_03300;partial=true;product=IS3 family transposase;protein_id=PDP77658.1;transl_table=11 ##sequence-region NSLT01000110.1 1 1972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000110.1 Genbank region 1 1972 . + . ID=NSLT01000110.1:1..1972;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000110.1 Genbank gene 1 769 . - . ID=gene-CLI76_10700;Name=CLI76_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10700;partial=true;start_range=.,1 NSLT01000110.1 Protein Homology CDS 1 769 . - 0 ID=cds-PDP76277.1;Parent=gene-CLI76_10700;Dbxref=NCBI_GP:PDP76277.1;Name=PDP76277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10700;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76277.1;start_range=.,1;transl_table=11 NSLT01000110.1 Genbank gene 874 1053 . - . ID=gene-CLI76_10705;Name=CLI76_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10705 NSLT01000110.1 Protein Homology CDS 874 1053 . - 0 ID=cds-PDP76278.1;Parent=gene-CLI76_10705;Dbxref=NCBI_GP:PDP76278.1;Name=PDP76278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_10705;product=hypothetical protein;protein_id=PDP76278.1;transl_table=11 NSLT01000110.1 Genbank gene 1183 1972 . - . ID=gene-CLI76_10710;Name=CLI76_10710;end_range=1972,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10710;partial=true NSLT01000110.1 Protein Homology CDS 1183 1972 . - 1 ID=cds-PDP76279.1;Parent=gene-CLI76_10710;Dbxref=NCBI_GP:PDP76279.1;Name=PDP76279.1;end_range=1972,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10710;partial=true;product=IS3 family transposase;protein_id=PDP76279.1;transl_table=11 ##sequence-region NSLT01000111.1 1 1850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000111.1 Genbank region 1 1850 . + . ID=NSLT01000111.1:1..1850;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000111.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_10715;Name=CLI76_10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10715;pseudo=true NSLT01000111.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_10715;Parent=gene-CLI76_10715;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10715;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000111.1 Genbank gene 920 1099 . + . ID=gene-CLI76_10720;Name=CLI76_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10720 NSLT01000111.1 Protein Homology CDS 920 1099 . + 0 ID=cds-PDP76275.1;Parent=gene-CLI76_10720;Dbxref=NCBI_GP:PDP76275.1;Name=PDP76275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_10720;product=hypothetical protein;protein_id=PDP76275.1;transl_table=11 NSLT01000111.1 Genbank gene 1204 1850 . + . ID=gene-CLI76_10725;Name=CLI76_10725;end_range=1850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10725;partial=true NSLT01000111.1 Protein Homology CDS 1204 1850 . + 0 ID=cds-PDP76276.1;Parent=gene-CLI76_10725;Dbxref=NCBI_GP:PDP76276.1;Name=PDP76276.1;end_range=1850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10725;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76276.1;transl_table=11 ##sequence-region NSLT01000112.1 1 1817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000112.1 Genbank region 1 1817 . + . ID=NSLT01000112.1:1..1817;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000112.1 Genbank gene 231 1217 . + . ID=gene-CLI76_10730;Name=CLI76_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10730 NSLT01000112.1 Protein Homology CDS 231 1217 . + 0 ID=cds-PDP76273.1;Parent=gene-CLI76_10730;Dbxref=NCBI_GP:PDP76273.1;Name=PDP76273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457344.1;locus_tag=CLI76_10730;product=glycosyl transferase;protein_id=PDP76273.1;transl_table=11 NSLT01000112.1 Genbank gene 1187 1817 . + . ID=gene-CLI76_10735;Name=CLI76_10735;end_range=1817,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10735;partial=true NSLT01000112.1 Protein Homology CDS 1187 1817 . + 0 ID=cds-PDP76274.1;Parent=gene-CLI76_10735;Dbxref=NCBI_GP:PDP76274.1;Name=PDP76274.1;end_range=1817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815372.1;locus_tag=CLI76_10735;partial=true;product=hypothetical protein;protein_id=PDP76274.1;transl_table=11 ##sequence-region NSLT01000113.1 1 1815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000113.1 Genbank region 1 1815 . + . ID=NSLT01000113.1:1..1815;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000113.1 Genbank gene 693 1538 . + . ID=gene-CLI76_10740;Name=CLI76_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10740 NSLT01000113.1 Protein Homology CDS 693 1538 . + 0 ID=cds-PDP76272.1;Parent=gene-CLI76_10740;Dbxref=NCBI_GP:PDP76272.1;Name=PDP76272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874714.1;locus_tag=CLI76_10740;product=GLPGLI family protein;protein_id=PDP76272.1;transl_table=11 ##sequence-region NSLT01000114.1 1 1797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000114.1 Genbank region 1 1797 . + . ID=NSLT01000114.1:1..1797;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000114.1 Genbank pseudogene 83 233 . + . ID=gene-CLI76_10745;Name=CLI76_10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10745;pseudo=true NSLT01000114.1 Protein Homology CDS 83 233 . + 0 ID=cds-CLI76_10745;Parent=gene-CLI76_10745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815164.1;locus_tag=CLI76_10745;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000114.1 Genbank gene 813 1700 . + . ID=gene-CLI76_10750;Name=CLI76_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10750 NSLT01000114.1 Protein Homology CDS 813 1700 . + 0 ID=cds-PDP76271.1;Parent=gene-CLI76_10750;Dbxref=NCBI_GP:PDP76271.1;Name=PDP76271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224127.1;locus_tag=CLI76_10750;product=DNA primase;protein_id=PDP76271.1;transl_table=11 ##sequence-region NSLT01000115.1 1 1784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000115.1 Genbank region 1 1784 . + . ID=NSLT01000115.1:1..1784;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000115.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10755;Name=CLI76_10755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10755;pseudo=true NSLT01000115.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10755;Parent=gene-CLI76_10755;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10755;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000115.1 Genbank gene 468 1553 . - . ID=gene-CLI76_10760;Name=CLI76_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10760 NSLT01000115.1 Protein Homology CDS 468 1553 . - 0 ID=cds-PDP76270.1;Parent=gene-CLI76_10760;Dbxref=NCBI_GP:PDP76270.1;Name=PDP76270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10760;product=IS5/IS1182 family transposase;protein_id=PDP76270.1;transl_table=11 ##sequence-region NSLT01000116.1 1 1775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000116.1 Genbank region 1 1775 . + . ID=NSLT01000116.1:1..1775;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000116.1 Genbank gene 14 916 . - . ID=gene-CLI76_10765;Name=CLI76_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10765 NSLT01000116.1 Protein Homology CDS 14 916 . - 0 ID=cds-PDP76269.1;Parent=gene-CLI76_10765;Dbxref=NCBI_GP:PDP76269.1;Name=PDP76269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10765;product=IS982 family transposase IS195;protein_id=PDP76269.1;transl_table=11 NSLT01000116.1 Genbank gene 1651 1761 . - . ID=gene-CLI76_10770;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI76_10770 NSLT01000116.1 cmsearch rRNA 1651 1761 . - . ID=rna-CLI76_10770;Parent=gene-CLI76_10770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10770;product=5S ribosomal RNA NSLT01000116.1 cmsearch exon 1651 1761 . - . ID=exon-CLI76_10770-1;Parent=rna-CLI76_10770;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10770;product=5S ribosomal RNA ##sequence-region NSLT01000117.1 1 1753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000117.1 Genbank region 1 1753 . + . ID=NSLT01000117.1:1..1753;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000117.1 Genbank gene 201 1286 . + . ID=gene-CLI76_10775;Name=CLI76_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10775 NSLT01000117.1 Protein Homology CDS 201 1286 . + 0 ID=cds-PDP76268.1;Parent=gene-CLI76_10775;Dbxref=NCBI_GP:PDP76268.1;Name=PDP76268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10775;product=IS5/IS1182 family transposase;protein_id=PDP76268.1;transl_table=11 NSLT01000117.1 Genbank pseudogene 1429 1753 . + . ID=gene-CLI76_10780;Name=CLI76_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10780;pseudo=true NSLT01000117.1 Protein Homology CDS 1429 1753 . + 0 ID=cds-CLI76_10780;Parent=gene-CLI76_10780;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10780;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000118.1 1 1753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000118.1 Genbank region 1 1753 . + . ID=NSLT01000118.1:1..1753;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000118.1 Genbank gene 201 1286 . + . ID=gene-CLI76_10785;Name=CLI76_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10785 NSLT01000118.1 Protein Homology CDS 201 1286 . + 0 ID=cds-PDP76267.1;Parent=gene-CLI76_10785;Dbxref=NCBI_GP:PDP76267.1;Name=PDP76267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10785;product=IS5/IS1182 family transposase;protein_id=PDP76267.1;transl_table=11 NSLT01000118.1 Genbank pseudogene 1429 1753 . + . ID=gene-CLI76_10790;Name=CLI76_10790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10790;pseudo=true NSLT01000118.1 Protein Homology CDS 1429 1753 . + 0 ID=cds-CLI76_10790;Parent=gene-CLI76_10790;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10790;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000119.1 1 1681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000119.1 Genbank region 1 1681 . + . ID=NSLT01000119.1:1..1681;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000119.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_10795;Name=CLI76_10795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10795;pseudo=true NSLT01000119.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_10795;Parent=gene-CLI76_10795;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10795;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000119.1 Genbank pseudogene 407 874 . - . ID=gene-CLI76_10800;Name=CLI76_10800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10800;pseudo=true NSLT01000119.1 Protein Homology CDS 407 874 . - 0 ID=cds-CLI76_10800;Parent=gene-CLI76_10800;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874206.1;locus_tag=CLI76_10800;product=mobilization protein;pseudo=true;transl_table=11 NSLT01000119.1 Genbank pseudogene 976 1587 . - . ID=gene-CLI76_10805;Name=CLI76_10805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10805;pseudo=true NSLT01000119.1 Protein Homology CDS 976 1587 . - 0 ID=cds-CLI76_10805;Parent=gene-CLI76_10805;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011966703.1;locus_tag=CLI76_10805;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000011.1 1 48943 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000011.1 Genbank region 1 48943 . + . ID=NSLT01000011.1:1..48943;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000011.1 Genbank gene 201 1286 . + . ID=gene-CLI76_03305;Name=CLI76_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03305 NSLT01000011.1 Protein Homology CDS 201 1286 . + 0 ID=cds-PDP77576.1;Parent=gene-CLI76_03305;Dbxref=NCBI_GP:PDP77576.1;Name=PDP77576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_03305;product=IS5/IS1182 family transposase;protein_id=PDP77576.1;transl_table=11 NSLT01000011.1 Genbank pseudogene 1336 1434 . + . ID=gene-CLI76_03310;Name=CLI76_03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03310;pseudo=true NSLT01000011.1 Protein Homology CDS 1336 1434 . + 0 ID=cds-CLI76_03310;Parent=gene-CLI76_03310;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_03310;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000011.1 Genbank gene 1554 3692 . + . ID=gene-CLI76_03315;Name=CLI76_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03315 NSLT01000011.1 Protein Homology CDS 1554 3692 . + 0 ID=cds-PDP77577.1;Parent=gene-CLI76_03315;Dbxref=NCBI_GP:PDP77577.1;Name=PDP77577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585301.1;locus_tag=CLI76_03315;product=hypothetical protein;protein_id=PDP77577.1;transl_table=11 NSLT01000011.1 Genbank gene 3770 5857 . + . ID=gene-CLI76_03320;Name=CLI76_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03320 NSLT01000011.1 Protein Homology CDS 3770 5857 . + 0 ID=cds-PDP77611.1;Parent=gene-CLI76_03320;Dbxref=NCBI_GP:PDP77611.1;Name=PDP77611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956118.1;locus_tag=CLI76_03320;product=dipeptidyl carboxypeptidase II;protein_id=PDP77611.1;transl_table=11 NSLT01000011.1 Genbank gene 5954 6601 . + . ID=gene-CLI76_03325;Name=CLI76_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03325 NSLT01000011.1 Protein Homology CDS 5954 6601 . + 0 ID=cds-PDP77578.1;Parent=gene-CLI76_03325;Dbxref=NCBI_GP:PDP77578.1;Name=PDP77578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816455.1;locus_tag=CLI76_03325;product=hypothetical protein;protein_id=PDP77578.1;transl_table=11 NSLT01000011.1 Genbank gene 6651 8003 . + . ID=gene-CLI76_03330;Name=CLI76_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03330 NSLT01000011.1 Protein Homology CDS 6651 8003 . + 0 ID=cds-PDP77579.1;Parent=gene-CLI76_03330;Dbxref=NCBI_GP:PDP77579.1;Name=PDP77579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875044.1;locus_tag=CLI76_03330;product=hypothetical protein;protein_id=PDP77579.1;transl_table=11 NSLT01000011.1 Genbank gene 8117 8446 . - . ID=gene-CLI76_03335;Name=CLI76_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03335 NSLT01000011.1 Protein Homology CDS 8117 8446 . - 0 ID=cds-PDP77612.1;Parent=gene-CLI76_03335;Dbxref=NCBI_GP:PDP77612.1;Name=PDP77612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816453.1;locus_tag=CLI76_03335;product=hypothetical protein;protein_id=PDP77612.1;transl_table=11 NSLT01000011.1 Genbank gene 8685 9995 . - . ID=gene-CLI76_03340;Name=CLI76_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03340 NSLT01000011.1 Protein Homology CDS 8685 9995 . - 0 ID=cds-PDP77613.1;Parent=gene-CLI76_03340;Dbxref=NCBI_GP:PDP77613.1;Name=PDP77613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964791.1;locus_tag=CLI76_03340;product=hypothetical protein;protein_id=PDP77613.1;transl_table=11 NSLT01000011.1 Genbank gene 10154 10636 . - . ID=gene-CLI76_03345;Name=CLI76_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03345 NSLT01000011.1 Protein Homology CDS 10154 10636 . - 0 ID=cds-PDP77580.1;Parent=gene-CLI76_03345;Dbxref=NCBI_GP:PDP77580.1;Name=PDP77580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457775.1;locus_tag=CLI76_03345;product=DNA-binding protein;protein_id=PDP77580.1;transl_table=11 NSLT01000011.1 Genbank gene 11365 12123 . - . ID=gene-CLI76_03350;Name=CLI76_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03350 NSLT01000011.1 Protein Homology CDS 11365 12123 . - 0 ID=cds-PDP77581.1;Parent=gene-CLI76_03350;Dbxref=NCBI_GP:PDP77581.1;Name=PDP77581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585297.1;locus_tag=CLI76_03350;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=PDP77581.1;transl_table=11 NSLT01000011.1 Genbank gene 12127 14493 . - . ID=gene-CLI76_03355;Name=CLI76_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03355 NSLT01000011.1 Protein Homology CDS 12127 14493 . - 0 ID=cds-PDP77582.1;Parent=gene-CLI76_03355;Dbxref=NCBI_GP:PDP77582.1;Name=PDP77582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457773.1;locus_tag=CLI76_03355;product=DNA topoisomerase I;protein_id=PDP77582.1;transl_table=11 NSLT01000011.1 Genbank gene 14724 14945 . - . ID=gene-CLI76_03360;Name=CLI76_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03360 NSLT01000011.1 Protein Homology CDS 14724 14945 . - 0 ID=cds-PDP77583.1;Parent=gene-CLI76_03360;Dbxref=NCBI_GP:PDP77583.1;Name=PDP77583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI76_03360;product=hypothetical protein;protein_id=PDP77583.1;transl_table=11 NSLT01000011.1 Genbank gene 15228 17135 . - . ID=gene-CLI76_03365;Name=CLI76_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03365 NSLT01000011.1 Protein Homology CDS 15228 17135 . - 0 ID=cds-PDP77584.1;Parent=gene-CLI76_03365;Dbxref=NCBI_GP:PDP77584.1;Name=PDP77584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816447.1;locus_tag=CLI76_03365;product=collagenase;protein_id=PDP77584.1;transl_table=11 NSLT01000011.1 Genbank gene 17119 17769 . - . ID=gene-CLI76_03370;Name=CLI76_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03370 NSLT01000011.1 Protein Homology CDS 17119 17769 . - 0 ID=cds-PDP77585.1;Parent=gene-CLI76_03370;Dbxref=NCBI_GP:PDP77585.1;Name=PDP77585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585294.1;locus_tag=CLI76_03370;product=uracil phosphoribosyltransferase;protein_id=PDP77585.1;transl_table=11 NSLT01000011.1 Genbank gene 17907 18641 . + . ID=gene-CLI76_03375;Name=CLI76_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03375 NSLT01000011.1 Protein Homology CDS 17907 18641 . + 0 ID=cds-PDP77586.1;Parent=gene-CLI76_03375;Dbxref=NCBI_GP:PDP77586.1;Name=PDP77586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873603.1;locus_tag=CLI76_03375;product=PorT family protein;protein_id=PDP77586.1;transl_table=11 NSLT01000011.1 Genbank gene 18796 19542 . + . ID=gene-CLI76_03380;Name=CLI76_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03380 NSLT01000011.1 Protein Homology CDS 18796 19542 . + 0 ID=cds-PDP77587.1;Parent=gene-CLI76_03380;Dbxref=NCBI_GP:PDP77587.1;Name=PDP77587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457771.1;locus_tag=CLI76_03380;product=glycosyltransferase;protein_id=PDP77587.1;transl_table=11 NSLT01000011.1 Genbank gene 19603 19679 . + . ID=gene-CLI76_03385;Name=CLI76_03385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03385 NSLT01000011.1 tRNAscan-SE tRNA 19603 19679 . + . ID=rna-CLI76_03385;Parent=gene-CLI76_03385;anticodon=(pos:19637..19639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03385;product=tRNA-Arg NSLT01000011.1 tRNAscan-SE exon 19603 19679 . + . ID=exon-CLI76_03385-1;Parent=rna-CLI76_03385;anticodon=(pos:19637..19639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03385;product=tRNA-Arg NSLT01000011.1 Genbank gene 20194 21588 . + . ID=gene-CLI76_03390;Name=CLI76_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03390 NSLT01000011.1 Protein Homology CDS 20194 21588 . + 0 ID=cds-PDP77588.1;Parent=gene-CLI76_03390;Dbxref=NCBI_GP:PDP77588.1;Name=PDP77588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585289.1;locus_tag=CLI76_03390;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP77588.1;transl_table=11 NSLT01000011.1 Genbank gene 21614 22951 . + . ID=gene-CLI76_03395;Name=CLI76_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03395 NSLT01000011.1 Protein Homology CDS 21614 22951 . + 0 ID=cds-PDP77589.1;Parent=gene-CLI76_03395;Dbxref=NCBI_GP:PDP77589.1;Name=PDP77589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873552.1;locus_tag=CLI76_03395;product=histidine kinase;protein_id=PDP77589.1;transl_table=11 NSLT01000011.1 Genbank gene 23107 23505 . + . ID=gene-CLI76_03400;Name=CLI76_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03400 NSLT01000011.1 Protein Homology CDS 23107 23505 . + 0 ID=cds-PDP77590.1;Parent=gene-CLI76_03400;Dbxref=NCBI_GP:PDP77590.1;Name=PDP77590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585287.1;locus_tag=CLI76_03400;product=lactoylglutathione lyase;protein_id=PDP77590.1;transl_table=11 NSLT01000011.1 Genbank gene 23590 24354 . + . ID=gene-CLI76_03405;Name=CLI76_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03405 NSLT01000011.1 Protein Homology CDS 23590 24354 . + 0 ID=cds-PDP77591.1;Parent=gene-CLI76_03405;Dbxref=NCBI_GP:PDP77591.1;Name=PDP77591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457768.1;locus_tag=CLI76_03405;product=RNA methyltransferase;protein_id=PDP77591.1;transl_table=11 NSLT01000011.1 Genbank gene 25286 25855 . - . ID=gene-CLI76_03410;Name=CLI76_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03410 NSLT01000011.1 Protein Homology CDS 25286 25855 . - 0 ID=cds-PDP77592.1;Parent=gene-CLI76_03410;Dbxref=NCBI_GP:PDP77592.1;Name=PDP77592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965881.1;locus_tag=CLI76_03410;product=hydrolase Nlp/P60;protein_id=PDP77592.1;transl_table=11 NSLT01000011.1 Genbank gene 25830 26744 . - . ID=gene-CLI76_03415;Name=CLI76_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03415 NSLT01000011.1 Protein Homology CDS 25830 26744 . - 0 ID=cds-PDP77593.1;Parent=gene-CLI76_03415;Dbxref=NCBI_GP:PDP77593.1;Name=PDP77593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965880.1;locus_tag=CLI76_03415;product=ribonuclease Z;protein_id=PDP77593.1;transl_table=11 NSLT01000011.1 Genbank gene 26776 27228 . - . ID=gene-CLI76_03420;Name=CLI76_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03420 NSLT01000011.1 Protein Homology CDS 26776 27228 . - 0 ID=cds-PDP77594.1;Parent=gene-CLI76_03420;Dbxref=NCBI_GP:PDP77594.1;Name=PDP77594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965879.1;locus_tag=CLI76_03420;product=nucleoside deaminase;protein_id=PDP77594.1;transl_table=11 NSLT01000011.1 Genbank gene 27225 27410 . - . ID=gene-CLI76_03425;Name=CLI76_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03425 NSLT01000011.1 Protein Homology CDS 27225 27410 . - 0 ID=cds-PDP77614.1;Parent=gene-CLI76_03425;Dbxref=NCBI_GP:PDP77614.1;Name=PDP77614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584691.1;locus_tag=CLI76_03425;product=hypothetical protein;protein_id=PDP77614.1;transl_table=11 NSLT01000011.1 Genbank gene 27478 28083 . - . ID=gene-CLI76_03430;Name=CLI76_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03430 NSLT01000011.1 Protein Homology CDS 27478 28083 . - 0 ID=cds-PDP77595.1;Parent=gene-CLI76_03430;Dbxref=NCBI_GP:PDP77595.1;Name=PDP77595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457764.1;locus_tag=CLI76_03430;product=ribonuclease HII;protein_id=PDP77595.1;transl_table=11 NSLT01000011.1 Genbank gene 28094 29308 . - . ID=gene-CLI76_03435;Name=CLI76_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03435 NSLT01000011.1 Protein Homology CDS 28094 29308 . - 0 ID=cds-PDP77596.1;Parent=gene-CLI76_03435;Dbxref=NCBI_GP:PDP77596.1;Name=PDP77596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873581.1;locus_tag=CLI76_03435;product=cysteine desulfurase CsdA;protein_id=PDP77596.1;transl_table=11 NSLT01000011.1 Genbank gene 29367 29918 . - . ID=gene-CLI76_03440;Name=CLI76_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03440 NSLT01000011.1 Protein Homology CDS 29367 29918 . - 0 ID=cds-PDP77597.1;Parent=gene-CLI76_03440;Dbxref=NCBI_GP:PDP77597.1;Name=PDP77597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457762.1;locus_tag=CLI76_03440;product=nitroreductase;protein_id=PDP77597.1;transl_table=11 NSLT01000011.1 Genbank gene 29915 30517 . - . ID=gene-CLI76_03445;Name=CLI76_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03445 NSLT01000011.1 Protein Homology CDS 29915 30517 . - 0 ID=cds-PDP77598.1;Parent=gene-CLI76_03445;Dbxref=NCBI_GP:PDP77598.1;Name=PDP77598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008145854.1;locus_tag=CLI76_03445;product=riboflavin synthase;protein_id=PDP77598.1;transl_table=11 NSLT01000011.1 Genbank gene 30731 31105 . + . ID=gene-CLI76_03450;Name=CLI76_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03450 NSLT01000011.1 Protein Homology CDS 30731 31105 . + 0 ID=cds-PDP77599.1;Parent=gene-CLI76_03450;Dbxref=NCBI_GP:PDP77599.1;Name=PDP77599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_03450;product=DUF1661 domain-containing protein;protein_id=PDP77599.1;transl_table=11 NSLT01000011.1 Genbank gene 31096 31752 . + . ID=gene-CLI76_03455;Name=CLI76_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03455 NSLT01000011.1 Protein Homology CDS 31096 31752 . + 0 ID=cds-PDP77600.1;Parent=gene-CLI76_03455;Dbxref=NCBI_GP:PDP77600.1;Name=PDP77600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873546.1;locus_tag=CLI76_03455;product=PASTA domain-containing protein;protein_id=PDP77600.1;transl_table=11 NSLT01000011.1 Genbank gene 31802 32887 . + . ID=gene-CLI76_03460;Name=CLI76_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03460 NSLT01000011.1 Protein Homology CDS 31802 32887 . + 0 ID=cds-PDP77615.1;Parent=gene-CLI76_03460;Dbxref=NCBI_GP:PDP77615.1;Name=PDP77615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005861030.1;locus_tag=CLI76_03460;product=pseudouridine synthase;protein_id=PDP77615.1;transl_table=11 NSLT01000011.1 Genbank gene 32954 33946 . + . ID=gene-CLI76_03465;Name=CLI76_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03465 NSLT01000011.1 Protein Homology CDS 32954 33946 . + 0 ID=cds-PDP77616.1;Parent=gene-CLI76_03465;Dbxref=NCBI_GP:PDP77616.1;Name=PDP77616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457758.1;locus_tag=CLI76_03465;product=D-alanine--D-alanine ligase;protein_id=PDP77616.1;transl_table=11 NSLT01000011.1 Genbank gene 33965 35131 . + . ID=gene-CLI76_03470;Name=CLI76_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03470 NSLT01000011.1 Protein Homology CDS 33965 35131 . + 0 ID=cds-PDP77601.1;Parent=gene-CLI76_03470;Dbxref=NCBI_GP:PDP77601.1;Name=PDP77601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585281.1;locus_tag=CLI76_03470;product=acyltransferase;protein_id=PDP77601.1;transl_table=11 NSLT01000011.1 Genbank pseudogene 35177 35368 . + . ID=gene-CLI76_03475;Name=CLI76_03475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03475;pseudo=true NSLT01000011.1 Protein Homology CDS 35177 35368 . + 0 ID=cds-CLI76_03475;Parent=gene-CLI76_03475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816434.1;locus_tag=CLI76_03475;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000011.1 Genbank gene 35365 35754 . + . ID=gene-CLI76_03480;Name=CLI76_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03480 NSLT01000011.1 Protein Homology CDS 35365 35754 . + 0 ID=cds-PDP77602.1;Parent=gene-CLI76_03480;Dbxref=NCBI_GP:PDP77602.1;Name=PDP77602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585280.1;locus_tag=CLI76_03480;product=PEGA domain-containing protein;protein_id=PDP77602.1;transl_table=11 NSLT01000011.1 Genbank gene 35821 36447 . - . ID=gene-CLI76_03485;Name=CLI76_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03485 NSLT01000011.1 Protein Homology CDS 35821 36447 . - 0 ID=cds-PDP77603.1;Parent=gene-CLI76_03485;Dbxref=NCBI_GP:PDP77603.1;Name=PDP77603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873545.1;locus_tag=CLI76_03485;product=HAD family phosphatase;protein_id=PDP77603.1;transl_table=11 NSLT01000011.1 Genbank gene 36532 38586 . - . ID=gene-CLI76_03490;Name=CLI76_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03490 NSLT01000011.1 Protein Homology CDS 36532 38586 . - 0 ID=cds-PDP77604.1;Parent=gene-CLI76_03490;Dbxref=NCBI_GP:PDP77604.1;Name=PDP77604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585278.1;locus_tag=CLI76_03490;product=peptidase S9;protein_id=PDP77604.1;transl_table=11 NSLT01000011.1 Genbank gene 39251 39859 . - . ID=gene-CLI76_03495;Name=CLI76_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03495 NSLT01000011.1 Protein Homology CDS 39251 39859 . - 0 ID=cds-PDP77605.1;Parent=gene-CLI76_03495;Dbxref=NCBI_GP:PDP77605.1;Name=PDP77605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873568.1;locus_tag=CLI76_03495;product=hydrolase Nlp/P60;protein_id=PDP77605.1;transl_table=11 NSLT01000011.1 Genbank gene 40091 40828 . + . ID=gene-CLI76_03500;Name=CLI76_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03500 NSLT01000011.1 Protein Homology CDS 40091 40828 . + 0 ID=cds-PDP77606.1;Parent=gene-CLI76_03500;Dbxref=NCBI_GP:PDP77606.1;Name=PDP77606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457753.1;locus_tag=CLI76_03500;product=DNA-binding response regulator;protein_id=PDP77606.1;transl_table=11 NSLT01000011.1 Genbank pseudogene 40759 40908 . + . ID=gene-CLI76_03505;Name=CLI76_03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03505;pseudo=true NSLT01000011.1 Protein Homology CDS 40759 40908 . + 0 ID=cds-CLI76_03505;Parent=gene-CLI76_03505;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585273.1;locus_tag=CLI76_03505;product=histidine kinase;pseudo=true;transl_table=11 NSLT01000011.1 Genbank gene 40961 41350 . - . ID=gene-CLI76_03510;Name=CLI76_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03510 NSLT01000011.1 Protein Homology CDS 40961 41350 . - 0 ID=cds-PDP77607.1;Parent=gene-CLI76_03510;Dbxref=NCBI_GP:PDP77607.1;Name=PDP77607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873577.1;locus_tag=CLI76_03510;product=hypothetical protein;protein_id=PDP77607.1;transl_table=11 NSLT01000011.1 Genbank gene 41384 42304 . + . ID=gene-CLI76_03515;Name=CLI76_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03515 NSLT01000011.1 Protein Homology CDS 41384 42304 . + 0 ID=cds-PDP77608.1;Parent=gene-CLI76_03515;Dbxref=NCBI_GP:PDP77608.1;Name=PDP77608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873610.1;locus_tag=CLI76_03515;product=magnesium transporter CorA;protein_id=PDP77608.1;transl_table=11 NSLT01000011.1 Genbank gene 42309 43055 . + . ID=gene-CLI76_03520;Name=CLI76_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03520 NSLT01000011.1 Protein Homology CDS 42309 43055 . + 0 ID=cds-PDP77609.1;Parent=gene-CLI76_03520;Dbxref=NCBI_GP:PDP77609.1;Name=PDP77609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816427.1;locus_tag=CLI76_03520;product=copper homeostasis protein CutC;protein_id=PDP77609.1;transl_table=11 NSLT01000011.1 Genbank gene 43992 44258 . - . ID=gene-CLI76_03525;Name=CLI76_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03525 NSLT01000011.1 Protein Homology CDS 43992 44258 . - 0 ID=cds-PDP77610.1;Parent=gene-CLI76_03525;Dbxref=NCBI_GP:PDP77610.1;Name=PDP77610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004284354.1;locus_tag=CLI76_03525;product=hypothetical protein;protein_id=PDP77610.1;transl_table=11 NSLT01000011.1 Genbank pseudogene 44343 48815 . - . ID=gene-CLI76_03530;Name=CLI76_03530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03530;pseudo=true NSLT01000011.1 Protein Homology CDS 44343 48815 . - 0 ID=cds-CLI76_03530;Parent=gene-CLI76_03530;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457749.1;locus_tag=CLI76_03530;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000120.1 1 1642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000120.1 Genbank region 1 1642 . + . ID=NSLT01000120.1:1..1642;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000120.1 Genbank gene 1 1268 . + . ID=gene-CLI76_10810;Name=CLI76_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10810;partial=true;start_range=.,1 NSLT01000120.1 Protein Homology CDS 1 1268 . + 2 ID=cds-PDP76266.1;Parent=gene-CLI76_10810;Dbxref=NCBI_GP:PDP76266.1;Name=PDP76266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_10810;partial=true;product=peptidase C25;protein_id=PDP76266.1;start_range=.,1;transl_table=11 NSLT01000120.1 Genbank pseudogene 1512 1610 . + . ID=gene-CLI76_10815;Name=CLI76_10815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10815;pseudo=true NSLT01000120.1 Protein Homology CDS 1512 1610 . + 0 ID=cds-CLI76_10815;Parent=gene-CLI76_10815;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_10815;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000121.1 1 1594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000121.1 Genbank region 1 1594 . + . ID=NSLT01000121.1:1..1594;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000121.1 Genbank gene 1 1078 . - . ID=gene-CLI76_10820;Name=CLI76_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10820;partial=true;start_range=.,1 NSLT01000121.1 Protein Homology CDS 1 1078 . - 0 ID=cds-PDP76264.1;Parent=gene-CLI76_10820;Dbxref=NCBI_GP:PDP76264.1;Name=PDP76264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358014.1;locus_tag=CLI76_10820;partial=true;product=anticodon nuclease;protein_id=PDP76264.1;start_range=.,1;transl_table=11 NSLT01000121.1 Genbank gene 1082 1594 . - . ID=gene-CLI76_10825;Name=CLI76_10825;end_range=1594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10825;partial=true NSLT01000121.1 Protein Homology CDS 1082 1594 . - 0 ID=cds-PDP76265.1;Parent=gene-CLI76_10825;Dbxref=NCBI_GP:PDP76265.1;Name=PDP76265.1;end_range=1594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018358015.1;locus_tag=CLI76_10825;partial=true;product=DEAD/DEAH box helicase;protein_id=PDP76265.1;transl_table=11 ##sequence-region NSLT01000122.1 1 1521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000122.1 Genbank region 1 1521 . + . ID=NSLT01000122.1:1..1521;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000122.1 Genbank pseudogene 14 460 . - . ID=gene-CLI76_10830;Name=CLI76_10830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10830;pseudo=true NSLT01000122.1 Protein Homology CDS 14 460 . - 0 ID=cds-CLI76_10830;Parent=gene-CLI76_10830;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10830;product=IS982 family transposase;pseudo=true;transl_table=11 NSLT01000122.1 Genbank pseudogene 450 548 . + . ID=gene-CLI76_10835;Name=CLI76_10835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10835;pseudo=true NSLT01000122.1 Protein Homology CDS 450 548 . + 0 ID=cds-CLI76_10835;Parent=gene-CLI76_10835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_10835;product=integrase;pseudo=true;transl_table=11 NSLT01000122.1 Genbank gene 740 1521 . - . ID=gene-CLI76_10840;Name=CLI76_10840;end_range=1521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10840;partial=true NSLT01000122.1 Protein Homology CDS 740 1521 . - 2 ID=cds-PDP76263.1;Parent=gene-CLI76_10840;Dbxref=NCBI_GP:PDP76263.1;Name=PDP76263.1;end_range=1521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10840;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76263.1;transl_table=11 ##sequence-region NSLT01000123.1 1 1377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000123.1 Genbank region 1 1377 . + . ID=NSLT01000123.1:1..1377;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000123.1 Genbank gene 1 1377 . + . ID=gene-CLI76_10845;Name=CLI76_10845;end_range=1377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10845;partial=true;start_range=.,1 NSLT01000123.1 Protein Homology CDS 1 1377 . + 0 ID=cds-PDP76262.1;Parent=gene-CLI76_10845;Dbxref=NCBI_GP:PDP76262.1;Name=PDP76262.1;end_range=1377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585028.1;locus_tag=CLI76_10845;partial=true;product=hypothetical protein;protein_id=PDP76262.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000124.1 1 1302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000124.1 Genbank region 1 1302 . + . ID=NSLT01000124.1:1..1302;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000124.1 Genbank gene 10 1266 . - . ID=gene-CLI76_10850;Name=CLI76_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10850 NSLT01000124.1 Protein Homology CDS 10 1266 . - 0 ID=cds-PDP76261.1;Parent=gene-CLI76_10850;Dbxref=NCBI_GP:PDP76261.1;Name=PDP76261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873857.1;locus_tag=CLI76_10850;product=IS5/IS1182 family transposase;protein_id=PDP76261.1;transl_table=11 ##sequence-region NSLT01000125.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000125.1 Genbank region 1 1249 . + . ID=NSLT01000125.1:1..1249;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000125.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10855;Name=CLI76_10855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10855;pseudo=true NSLT01000125.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10855;Parent=gene-CLI76_10855;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10855;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000125.1 Genbank gene 468 1249 . - . ID=gene-CLI76_10860;Name=CLI76_10860;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10860;partial=true NSLT01000125.1 Protein Homology CDS 468 1249 . - 2 ID=cds-PDP76260.1;Parent=gene-CLI76_10860;Dbxref=NCBI_GP:PDP76260.1;Name=PDP76260.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10860;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76260.1;transl_table=11 ##sequence-region NSLT01000126.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000126.1 Genbank region 1 1249 . + . ID=NSLT01000126.1:1..1249;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000126.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10865;Name=CLI76_10865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10865;pseudo=true NSLT01000126.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10865;Parent=gene-CLI76_10865;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10865;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000126.1 Genbank gene 468 1249 . - . ID=gene-CLI76_10870;Name=CLI76_10870;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10870;partial=true NSLT01000126.1 Protein Homology CDS 468 1249 . - 2 ID=cds-PDP76259.1;Parent=gene-CLI76_10870;Dbxref=NCBI_GP:PDP76259.1;Name=PDP76259.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10870;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76259.1;transl_table=11 ##sequence-region NSLT01000127.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000127.1 Genbank region 1 1249 . + . ID=NSLT01000127.1:1..1249;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000127.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10875;Name=CLI76_10875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10875;pseudo=true NSLT01000127.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10875;Parent=gene-CLI76_10875;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10875;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000127.1 Genbank gene 468 1249 . - . ID=gene-CLI76_10880;Name=CLI76_10880;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10880;partial=true NSLT01000127.1 Protein Homology CDS 468 1249 . - 2 ID=cds-PDP76258.1;Parent=gene-CLI76_10880;Dbxref=NCBI_GP:PDP76258.1;Name=PDP76258.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10880;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76258.1;transl_table=11 ##sequence-region NSLT01000128.1 1 1249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000128.1 Genbank region 1 1249 . + . ID=NSLT01000128.1:1..1249;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000128.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10885;Name=CLI76_10885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10885;pseudo=true NSLT01000128.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10885;Parent=gene-CLI76_10885;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10885;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000128.1 Genbank gene 468 1249 . - . ID=gene-CLI76_10890;Name=CLI76_10890;end_range=1249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10890;partial=true NSLT01000128.1 Protein Homology CDS 468 1249 . - 2 ID=cds-PDP76257.1;Parent=gene-CLI76_10890;Dbxref=NCBI_GP:PDP76257.1;Name=PDP76257.1;end_range=1249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10890;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76257.1;transl_table=11 ##sequence-region NSLT01000129.1 1 1242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000129.1 Genbank region 1 1242 . + . ID=NSLT01000129.1:1..1242;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000129.1 Genbank gene 3 1242 . + . ID=gene-CLI76_10895;Name=CLI76_10895;end_range=1242,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10895;partial=true NSLT01000129.1 Protein Homology CDS 3 1242 . + 0 ID=cds-PDP76256.1;Parent=gene-CLI76_10895;Dbxref=NCBI_GP:PDP76256.1;Name=PDP76256.1;end_range=1242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007766293.1;locus_tag=CLI76_10895;partial=true;product=DEAD/DEAH box helicase;protein_id=PDP76256.1;transl_table=11 ##sequence-region NSLT01000012.1 1 48202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000012.1 Genbank region 1 48202 . + . ID=NSLT01000012.1:1..48202;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000012.1 Genbank gene 200 499 . - . ID=gene-CLI76_03535;Name=CLI76_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03535 NSLT01000012.1 Protein Homology CDS 200 499 . - 0 ID=cds-PDP77544.1;Parent=gene-CLI76_03535;Dbxref=NCBI_GP:PDP77544.1;Name=PDP77544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585082.1;locus_tag=CLI76_03535;product=hypothetical protein;protein_id=PDP77544.1;transl_table=11 NSLT01000012.1 Genbank gene 484 3633 . - . ID=gene-CLI76_03540;Name=CLI76_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03540 NSLT01000012.1 Protein Homology CDS 484 3633 . - 0 ID=cds-PDP77545.1;Parent=gene-CLI76_03540;Dbxref=NCBI_GP:PDP77545.1;Name=PDP77545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458263.1;locus_tag=CLI76_03540;product=multidrug transporter AcrB;protein_id=PDP77545.1;transl_table=11 NSLT01000012.1 Genbank gene 3630 4691 . - . ID=gene-CLI76_03545;Name=CLI76_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03545 NSLT01000012.1 Protein Homology CDS 3630 4691 . - 0 ID=cds-PDP77546.1;Parent=gene-CLI76_03545;Dbxref=NCBI_GP:PDP77546.1;Name=PDP77546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585080.1;locus_tag=CLI76_03545;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP77546.1;transl_table=11 NSLT01000012.1 Genbank gene 4726 6114 . - . ID=gene-CLI76_03550;Name=CLI76_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03550 NSLT01000012.1 Protein Homology CDS 4726 6114 . - 0 ID=cds-PDP77573.1;Parent=gene-CLI76_03550;Dbxref=NCBI_GP:PDP77573.1;Name=PDP77573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585079.1;locus_tag=CLI76_03550;product=transporter;protein_id=PDP77573.1;transl_table=11 NSLT01000012.1 Genbank gene 6986 8446 . - . ID=gene-CLI76_03555;Name=CLI76_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03555 NSLT01000012.1 Protein Homology CDS 6986 8446 . - 0 ID=cds-PDP77547.1;Parent=gene-CLI76_03555;Dbxref=NCBI_GP:PDP77547.1;Name=PDP77547.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585077.1;locus_tag=CLI76_03555;product=aminoacyl-histidine dipeptidase;protein_id=PDP77547.1;transl_table=11 NSLT01000012.1 Genbank gene 8527 8742 . + . ID=gene-CLI76_03560;Name=CLI76_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03560 NSLT01000012.1 Protein Homology CDS 8527 8742 . + 0 ID=cds-PDP77548.1;Parent=gene-CLI76_03560;Dbxref=NCBI_GP:PDP77548.1;Name=PDP77548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966091.1;locus_tag=CLI76_03560;product=hypothetical protein;protein_id=PDP77548.1;transl_table=11 NSLT01000012.1 Genbank gene 8774 9394 . + . ID=gene-CLI76_03565;Name=CLI76_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03565 NSLT01000012.1 Protein Homology CDS 8774 9394 . + 0 ID=cds-PDP77549.1;Parent=gene-CLI76_03565;Dbxref=NCBI_GP:PDP77549.1;Name=PDP77549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585075.1;locus_tag=CLI76_03565;product=hypothetical protein;protein_id=PDP77549.1;transl_table=11 NSLT01000012.1 Genbank gene 9575 12058 . - . ID=gene-CLI76_03570;Name=CLI76_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03570 NSLT01000012.1 Protein Homology CDS 9575 12058 . - 0 ID=cds-PDP77550.1;Parent=gene-CLI76_03570;Dbxref=NCBI_GP:PDP77550.1;Name=PDP77550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875072.1;locus_tag=CLI76_03570;product=TonB-dependent receptor;protein_id=PDP77550.1;transl_table=11 NSLT01000012.1 Genbank gene 12474 12549 . - . ID=gene-CLI76_03575;Name=CLI76_03575;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03575 NSLT01000012.1 tRNAscan-SE tRNA 12474 12549 . - . ID=rna-CLI76_03575;Parent=gene-CLI76_03575;anticodon=(pos:complement(12514..12516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03575;product=tRNA-Gly NSLT01000012.1 tRNAscan-SE exon 12474 12549 . - . ID=exon-CLI76_03575-1;Parent=rna-CLI76_03575;anticodon=(pos:complement(12514..12516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03575;product=tRNA-Gly NSLT01000012.1 Genbank gene 12598 12682 . - . ID=gene-CLI76_03580;Name=CLI76_03580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03580 NSLT01000012.1 tRNAscan-SE tRNA 12598 12682 . - . ID=rna-CLI76_03580;Parent=gene-CLI76_03580;anticodon=(pos:complement(12647..12649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03580;product=tRNA-Leu NSLT01000012.1 tRNAscan-SE exon 12598 12682 . - . ID=exon-CLI76_03580-1;Parent=rna-CLI76_03580;anticodon=(pos:complement(12647..12649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03580;product=tRNA-Leu NSLT01000012.1 Genbank gene 12699 12771 . - . ID=gene-CLI76_03585;Name=CLI76_03585;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03585 NSLT01000012.1 tRNAscan-SE tRNA 12699 12771 . - . ID=rna-CLI76_03585;Parent=gene-CLI76_03585;anticodon=(pos:complement(12736..12738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03585;product=tRNA-Gly NSLT01000012.1 tRNAscan-SE exon 12699 12771 . - . ID=exon-CLI76_03585-1;Parent=rna-CLI76_03585;anticodon=(pos:complement(12736..12738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03585;product=tRNA-Gly NSLT01000012.1 Genbank gene 12805 12887 . - . ID=gene-CLI76_03590;Name=CLI76_03590;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03590 NSLT01000012.1 tRNAscan-SE tRNA 12805 12887 . - . ID=rna-CLI76_03590;Parent=gene-CLI76_03590;anticodon=(pos:complement(12851..12853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03590;product=tRNA-Tyr NSLT01000012.1 tRNAscan-SE exon 12805 12887 . - . ID=exon-CLI76_03590-1;Parent=rna-CLI76_03590;anticodon=(pos:complement(12851..12853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03590;product=tRNA-Tyr NSLT01000012.1 Genbank gene 13256 14104 . + . ID=gene-CLI76_03595;Name=CLI76_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03595 NSLT01000012.1 Protein Homology CDS 13256 14104 . + 0 ID=cds-PDP77574.1;Parent=gene-CLI76_03595;Dbxref=NCBI_GP:PDP77574.1;Name=PDP77574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585071.1;locus_tag=CLI76_03595;product=vancomycin resistance protein;protein_id=PDP77574.1;transl_table=11 NSLT01000012.1 Genbank gene 14214 16157 . + . ID=gene-CLI76_03600;Name=CLI76_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03600 NSLT01000012.1 Protein Homology CDS 14214 16157 . + 0 ID=cds-PDP77551.1;Parent=gene-CLI76_03600;Dbxref=NCBI_GP:PDP77551.1;Name=PDP77551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956057.1;locus_tag=CLI76_03600;product=NAD(+) synthase;protein_id=PDP77551.1;transl_table=11 NSLT01000012.1 Genbank gene 16347 19574 . - . ID=gene-CLI76_03605;Name=CLI76_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03605 NSLT01000012.1 Protein Homology CDS 16347 19574 . - 0 ID=cds-PDP77552.1;Parent=gene-CLI76_03605;Dbxref=NCBI_GP:PDP77552.1;Name=PDP77552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875074.1;locus_tag=CLI76_03605;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=PDP77552.1;transl_table=11 NSLT01000012.1 Genbank gene 19593 20666 . - . ID=gene-CLI76_03610;Name=CLI76_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03610 NSLT01000012.1 Protein Homology CDS 19593 20666 . - 0 ID=cds-PDP77553.1;Parent=gene-CLI76_03610;Dbxref=NCBI_GP:PDP77553.1;Name=PDP77553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458274.1;locus_tag=CLI76_03610;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit;protein_id=PDP77553.1;transl_table=11 NSLT01000012.1 Genbank gene 20700 22583 . - . ID=gene-CLI76_03615;Name=CLI76_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03615 NSLT01000012.1 Protein Homology CDS 20700 22583 . - 0 ID=cds-PDP77554.1;Parent=gene-CLI76_03615;Dbxref=NCBI_GP:PDP77554.1;Name=PDP77554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875082.1;locus_tag=CLI76_03615;product=amidophosphoribosyltransferase;protein_id=PDP77554.1;transl_table=11 NSLT01000012.1 Genbank gene 22674 24557 . - . ID=gene-CLI76_03620;Name=CLI76_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03620 NSLT01000012.1 Protein Homology CDS 22674 24557 . - 0 ID=cds-PDP77555.1;Parent=gene-CLI76_03620;Dbxref=NCBI_GP:PDP77555.1;Name=PDP77555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875081.1;locus_tag=CLI76_03620;product=membrane protein insertase YidC;protein_id=PDP77555.1;transl_table=11 NSLT01000012.1 Genbank gene 24684 26303 . - . ID=gene-CLI76_03625;Name=CLI76_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03625 NSLT01000012.1 Protein Homology CDS 24684 26303 . - 0 ID=cds-PDP77556.1;Parent=gene-CLI76_03625;Dbxref=NCBI_GP:PDP77556.1;Name=PDP77556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585065.1;locus_tag=CLI76_03625;product=CTP synthetase;protein_id=PDP77556.1;transl_table=11 NSLT01000012.1 Genbank gene 26419 26703 . - . ID=gene-CLI76_03630;Name=CLI76_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03630 NSLT01000012.1 Protein Homology CDS 26419 26703 . - 0 ID=cds-PDP77557.1;Parent=gene-CLI76_03630;Dbxref=NCBI_GP:PDP77557.1;Name=PDP77557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816287.1;locus_tag=CLI76_03630;product=DUF1661 domain-containing protein;protein_id=PDP77557.1;transl_table=11 NSLT01000012.1 Genbank gene 26958 28454 . + . ID=gene-CLI76_03635;Name=CLI76_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03635 NSLT01000012.1 Protein Homology CDS 26958 28454 . + 0 ID=cds-PDP77575.1;Parent=gene-CLI76_03635;Dbxref=NCBI_GP:PDP77575.1;Name=PDP77575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100813.1;locus_tag=CLI76_03635;product=inosine 5-monophosphate dehydrogenase;protein_id=PDP77575.1;transl_table=11 NSLT01000012.1 Genbank gene 28451 29359 . + . ID=gene-CLI76_03640;Name=CLI76_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03640 NSLT01000012.1 Protein Homology CDS 28451 29359 . + 0 ID=cds-PDP77558.1;Parent=gene-CLI76_03640;Dbxref=NCBI_GP:PDP77558.1;Name=PDP77558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816285.1;locus_tag=CLI76_03640;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP77558.1;transl_table=11 NSLT01000012.1 Genbank gene 29577 29846 . + . ID=gene-CLI76_03645;Name=CLI76_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03645 NSLT01000012.1 Protein Homology CDS 29577 29846 . + 0 ID=cds-PDP77559.1;Parent=gene-CLI76_03645;Dbxref=NCBI_GP:PDP77559.1;Name=PDP77559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005679636.1;locus_tag=CLI76_03645;product=co-chaperone GroES;protein_id=PDP77559.1;transl_table=11 NSLT01000012.1 Genbank gene 29885 31522 . + . ID=gene-CLI76_03650;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CLI76_03650 NSLT01000012.1 Protein Homology CDS 29885 31522 . + 0 ID=cds-PDP77560.1;Parent=gene-CLI76_03650;Dbxref=NCBI_GP:PDP77560.1;Name=PDP77560.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585059.1;locus_tag=CLI76_03650;product=molecular chaperone GroEL;protein_id=PDP77560.1;transl_table=11 NSLT01000012.1 Genbank gene 31907 31993 . + . ID=gene-CLI76_03655;Name=CLI76_03655;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03655 NSLT01000012.1 tRNAscan-SE tRNA 31907 31993 . + . ID=rna-CLI76_03655;Parent=gene-CLI76_03655;anticodon=(pos:31941..31943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03655;product=tRNA-Ser NSLT01000012.1 tRNAscan-SE exon 31907 31993 . + . ID=exon-CLI76_03655-1;Parent=rna-CLI76_03655;anticodon=(pos:31941..31943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03655;product=tRNA-Ser NSLT01000012.1 Genbank gene 32201 32926 . + . ID=gene-CLI76_03660;Name=CLI76_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03660 NSLT01000012.1 Protein Homology CDS 32201 32926 . + 0 ID=cds-PDP77561.1;Parent=gene-CLI76_03660;Dbxref=NCBI_GP:PDP77561.1;Name=PDP77561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875091.1;locus_tag=CLI76_03660;product=CPBP family intramembrane metalloprotease;protein_id=PDP77561.1;transl_table=11 NSLT01000012.1 Genbank gene 32902 35925 . + . ID=gene-CLI76_03665;Name=CLI76_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03665 NSLT01000012.1 Protein Homology CDS 32902 35925 . + 0 ID=cds-PDP77562.1;Parent=gene-CLI76_03665;Dbxref=NCBI_GP:PDP77562.1;Name=PDP77562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965011.1;locus_tag=CLI76_03665;product=nuclease;protein_id=PDP77562.1;transl_table=11 NSLT01000012.1 Genbank gene 35956 37203 . + . ID=gene-CLI76_03670;Name=CLI76_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03670 NSLT01000012.1 Protein Homology CDS 35956 37203 . + 0 ID=cds-PDP77563.1;Parent=gene-CLI76_03670;Dbxref=NCBI_GP:PDP77563.1;Name=PDP77563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816281.1;locus_tag=CLI76_03670;product=DUF4105 domain-containing protein;protein_id=PDP77563.1;transl_table=11 NSLT01000012.1 Genbank gene 37182 38777 . + . ID=gene-CLI76_03675;Name=CLI76_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03675 NSLT01000012.1 Protein Homology CDS 37182 38777 . + 0 ID=cds-PDP77564.1;Parent=gene-CLI76_03675;Dbxref=NCBI_GP:PDP77564.1;Name=PDP77564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965013.1;locus_tag=CLI76_03675;product=alkaline phosphatase family protein;protein_id=PDP77564.1;transl_table=11 NSLT01000012.1 Genbank gene 38870 42211 . + . ID=gene-CLI76_03680;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CLI76_03680 NSLT01000012.1 Protein Homology CDS 38870 42211 . + 0 ID=cds-PDP77565.1;Parent=gene-CLI76_03680;Dbxref=NCBI_GP:PDP77565.1;Name=PDP77565.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965014.1;locus_tag=CLI76_03680;product=preprotein translocase subunit SecA;protein_id=PDP77565.1;transl_table=11 NSLT01000012.1 Genbank gene 42303 43193 . + . ID=gene-CLI76_03685;Name=CLI76_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03685 NSLT01000012.1 Protein Homology CDS 42303 43193 . + 0 ID=cds-PDP77566.1;Parent=gene-CLI76_03685;Dbxref=NCBI_GP:PDP77566.1;Name=PDP77566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965015.1;locus_tag=CLI76_03685;product=YicC family protein;protein_id=PDP77566.1;transl_table=11 NSLT01000012.1 Genbank gene 43226 43792 . + . ID=gene-CLI76_03690;Name=CLI76_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03690 NSLT01000012.1 Protein Homology CDS 43226 43792 . + 0 ID=cds-PDP77567.1;Parent=gene-CLI76_03690;Dbxref=NCBI_GP:PDP77567.1;Name=PDP77567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585052.1;locus_tag=CLI76_03690;product=guanylate kinase;protein_id=PDP77567.1;transl_table=11 NSLT01000012.1 Genbank gene 43812 45044 . + . ID=gene-CLI76_03695;Name=CLI76_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03695 NSLT01000012.1 Protein Homology CDS 43812 45044 . + 0 ID=cds-PDP77568.1;Parent=gene-CLI76_03695;Dbxref=NCBI_GP:PDP77568.1;Name=PDP77568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965017.1;locus_tag=CLI76_03695;product=hypothetical protein;protein_id=PDP77568.1;transl_table=11 NSLT01000012.1 Genbank gene 45080 45535 . + . ID=gene-CLI76_03700;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CLI76_03700 NSLT01000012.1 Protein Homology CDS 45080 45535 . + 0 ID=cds-PDP77569.1;Parent=gene-CLI76_03700;Dbxref=NCBI_GP:PDP77569.1;Name=PDP77569.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585050.1;locus_tag=CLI76_03700;product=rRNA maturation RNase YbeY;protein_id=PDP77569.1;transl_table=11 NSLT01000012.1 Genbank gene 45552 46412 . + . ID=gene-CLI76_03705;Name=CLI76_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03705 NSLT01000012.1 Protein Homology CDS 45552 46412 . + 0 ID=cds-PDP77570.1;Parent=gene-CLI76_03705;Dbxref=NCBI_GP:PDP77570.1;Name=PDP77570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965019.1;locus_tag=CLI76_03705;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=PDP77570.1;transl_table=11 NSLT01000012.1 Genbank gene 46402 47004 . + . ID=gene-CLI76_03710;Name=CLI76_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03710 NSLT01000012.1 Protein Homology CDS 46402 47004 . + 0 ID=cds-PDP77571.1;Parent=gene-CLI76_03710;Dbxref=NCBI_GP:PDP77571.1;Name=PDP77571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458290.1;locus_tag=CLI76_03710;product=HAD-IB family hydrolase;protein_id=PDP77571.1;transl_table=11 NSLT01000012.1 Genbank pseudogene 47368 47557 . - . ID=gene-CLI76_03715;Name=CLI76_03715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03715;pseudo=true NSLT01000012.1 Protein Homology CDS 47368 47557 . - 0 ID=cds-CLI76_03715;Parent=gene-CLI76_03715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458291.1;locus_tag=CLI76_03715;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000012.1 Genbank gene 47586 48202 . - . ID=gene-CLI76_03720;Name=CLI76_03720;end_range=48202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03720;partial=true NSLT01000012.1 Protein Homology CDS 47586 48202 . - 2 ID=cds-PDP77572.1;Parent=gene-CLI76_03720;Dbxref=NCBI_GP:PDP77572.1;Name=PDP77572.1;end_range=48202,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458292.1;locus_tag=CLI76_03720;partial=true;product=peptidase C25;protein_id=PDP77572.1;transl_table=11 ##sequence-region NSLT01000130.1 1 1215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000130.1 Genbank region 1 1215 . + . ID=NSLT01000130.1:1..1215;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000130.1 Genbank gene 69 1202 . + . ID=gene-CLI76_10900;Name=CLI76_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10900 NSLT01000130.1 Protein Homology CDS 69 1202 . + 0 ID=cds-PDP76255.1;Parent=gene-CLI76_10900;Dbxref=NCBI_GP:PDP76255.1;Name=PDP76255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_10900;product=ISAs1 family transposase;protein_id=PDP76255.1;transl_table=11 ##sequence-region NSLT01000131.1 1 1157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000131.1 Genbank region 1 1157 . + . ID=NSLT01000131.1:1..1157;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000131.1 Genbank gene 1 312 . + . ID=gene-CLI76_10905;Name=CLI76_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10905;partial=true;start_range=.,1 NSLT01000131.1 Protein Homology CDS 1 312 . + 0 ID=cds-PDP76253.1;Parent=gene-CLI76_10905;Dbxref=NCBI_GP:PDP76253.1;Name=PDP76253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457884.1;locus_tag=CLI76_10905;partial=true;product=plasmid mobilization relaxosome protein MobC;protein_id=PDP76253.1;start_range=.,1;transl_table=11 NSLT01000131.1 Genbank gene 302 1157 . + . ID=gene-CLI76_10910;Name=CLI76_10910;end_range=1157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10910;partial=true NSLT01000131.1 Protein Homology CDS 302 1157 . + 0 ID=cds-PDP76254.1;Parent=gene-CLI76_10910;Dbxref=NCBI_GP:PDP76254.1;Name=PDP76254.1;end_range=1157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224130.1;locus_tag=CLI76_10910;partial=true;product=mobilization protein;protein_id=PDP76254.1;transl_table=11 ##sequence-region NSLT01000132.1 1 1153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000132.1 Genbank region 1 1153 . + . ID=NSLT01000132.1:1..1153;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000132.1 Genbank gene 1 1153 . + . ID=gene-CLI76_10915;Name=CLI76_10915;end_range=1153,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10915;partial=true;start_range=.,1 NSLT01000132.1 Protein Homology CDS 1 1153 . + 2 ID=cds-PDP76252.1;Parent=gene-CLI76_10915;Dbxref=NCBI_GP:PDP76252.1;Name=PDP76252.1;end_range=1153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_10915;partial=true;product=hemagglutinin;protein_id=PDP76252.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000133.1 1 1147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000133.1 Genbank region 1 1147 . + . ID=NSLT01000133.1:1..1147;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000133.1 Genbank gene 1 1065 . - . ID=gene-CLI76_10920;Name=CLI76_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10920;partial=true;start_range=.,1 NSLT01000133.1 Protein Homology CDS 1 1065 . - 0 ID=cds-PDP76251.1;Parent=gene-CLI76_10920;Dbxref=NCBI_GP:PDP76251.1;Name=PDP76251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008124761.1;locus_tag=CLI76_10920;partial=true;product=conjugal transfer protein TraG;protein_id=PDP76251.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000134.1 1 1133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000134.1 Genbank region 1 1133 . + . ID=NSLT01000134.1:1..1133;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000134.1 Genbank gene 158 1024 . + . ID=gene-CLI76_10925;Name=CLI76_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10925 NSLT01000134.1 Protein Homology CDS 158 1024 . + 0 ID=cds-PDP76249.1;Parent=gene-CLI76_10925;Dbxref=NCBI_GP:PDP76249.1;Name=PDP76249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10925;product=IS982 family transposase;protein_id=PDP76249.1;transl_table=11 NSLT01000134.1 Genbank gene 1021 1133 . - . ID=gene-CLI76_10930;Name=CLI76_10930;end_range=1133,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10930;partial=true NSLT01000134.1 Protein Homology CDS 1021 1133 . - 2 ID=cds-PDP76250.1;Parent=gene-CLI76_10930;Dbxref=NCBI_GP:PDP76250.1;Name=PDP76250.1;end_range=1133,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_10930;partial=true;product=ISAs1 family transposase;protein_id=PDP76250.1;transl_table=11 ##sequence-region NSLT01000135.1 1 1127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000135.1 Genbank region 1 1127 . + . ID=NSLT01000135.1:1..1127;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000135.1 Genbank gene 9 980 . + . ID=gene-CLI76_10935;Name=CLI76_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10935 NSLT01000135.1 Protein Homology CDS 9 980 . + 0 ID=cds-PDP76247.1;Parent=gene-CLI76_10935;Dbxref=NCBI_GP:PDP76247.1;Name=PDP76247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874681.1;locus_tag=CLI76_10935;product=N-acetylglucosamine-1-phosphate uridyltransferase;protein_id=PDP76247.1;transl_table=11 NSLT01000135.1 Genbank gene 1029 1127 . + . ID=gene-CLI76_10940;Name=CLI76_10940;end_range=1127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10940;partial=true NSLT01000135.1 Protein Homology CDS 1029 1127 . + 0 ID=cds-PDP76248.1;Parent=gene-CLI76_10940;Dbxref=NCBI_GP:PDP76248.1;Name=PDP76248.1;end_range=1127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798108.1;locus_tag=CLI76_10940;partial=true;product=radical SAM protein;protein_id=PDP76248.1;transl_table=11 ##sequence-region NSLT01000136.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000136.1 Genbank region 1 1121 . + . ID=NSLT01000136.1:1..1121;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000136.1 Genbank pseudogene 2 190 . + . ID=gene-CLI76_10945;Name=CLI76_10945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10945;pseudo=true NSLT01000136.1 Protein Homology CDS 2 190 . + 0 ID=cds-CLI76_10945;Parent=gene-CLI76_10945;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816540.1;locus_tag=CLI76_10945;product=conjugal transfer protein TraF;pseudo=true;transl_table=11 NSLT01000136.1 Genbank gene 332 1121 . - . ID=gene-CLI76_10950;Name=CLI76_10950;end_range=1121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10950;partial=true NSLT01000136.1 Protein Homology CDS 332 1121 . - 1 ID=cds-PDP76246.1;Parent=gene-CLI76_10950;Dbxref=NCBI_GP:PDP76246.1;Name=PDP76246.1;end_range=1121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10950;partial=true;product=IS3 family transposase;protein_id=PDP76246.1;transl_table=11 ##sequence-region NSLT01000137.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000137.1 Genbank region 1 1121 . + . ID=NSLT01000137.1:1..1121;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000137.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10955;Name=CLI76_10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10955;pseudo=true NSLT01000137.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10955;Parent=gene-CLI76_10955;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10955;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000137.1 Genbank gene 468 1121 . - . ID=gene-CLI76_10960;Name=CLI76_10960;end_range=1121,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10960;partial=true NSLT01000137.1 Protein Homology CDS 468 1121 . - 0 ID=cds-PDP76245.1;Parent=gene-CLI76_10960;Dbxref=NCBI_GP:PDP76245.1;Name=PDP76245.1;end_range=1121,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10960;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76245.1;transl_table=11 ##sequence-region NSLT01000138.1 1 1100 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000138.1 Genbank region 1 1100 . + . ID=NSLT01000138.1:1..1100;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000138.1 Genbank gene 1 1100 . - . ID=gene-CLI76_10965;Name=CLI76_10965;end_range=1100,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10965;partial=true;start_range=.,1 NSLT01000138.1 Protein Homology CDS 1 1100 . - 2 ID=cds-PDP76244.1;Parent=gene-CLI76_10965;Dbxref=NCBI_GP:PDP76244.1;Name=PDP76244.1;end_range=1100,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458653.1;locus_tag=CLI76_10965;partial=true;product=peptidase C25;protein_id=PDP76244.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000139.1 1 1086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000139.1 Genbank region 1 1086 . + . ID=NSLT01000139.1:1..1086;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000139.1 Genbank gene 1 1086 . + . ID=gene-CLI76_10970;Name=CLI76_10970;end_range=1086,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10970;partial=true;start_range=.,1 NSLT01000139.1 Protein Homology CDS 1 1086 . + 1 ID=cds-PDP76243.1;Parent=gene-CLI76_10970;Dbxref=NCBI_GP:PDP76243.1;Name=PDP76243.1;end_range=1086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585028.1;locus_tag=CLI76_10970;partial=true;product=hypothetical protein;protein_id=PDP76243.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000013.1 1 47414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000013.1 Genbank region 1 47414 . + . ID=NSLT01000013.1:1..47414;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000013.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_03725;Name=CLI76_03725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03725;pseudo=true NSLT01000013.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_03725;Parent=gene-CLI76_03725;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_03725;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000013.1 Genbank gene 946 2388 . - . ID=gene-CLI76_03730;Name=CLI76_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03730 NSLT01000013.1 Protein Homology CDS 946 2388 . - 0 ID=cds-PDP77543.1;Parent=gene-CLI76_03730;Dbxref=NCBI_GP:PDP77543.1;Name=PDP77543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584834.1;locus_tag=CLI76_03730;product=sialidase;protein_id=PDP77543.1;transl_table=11 NSLT01000013.1 Genbank gene 2679 2939 . - . ID=gene-CLI76_03735;Name=CLI76_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03735 NSLT01000013.1 Protein Homology CDS 2679 2939 . - 0 ID=cds-PDP77504.1;Parent=gene-CLI76_03735;Dbxref=NCBI_GP:PDP77504.1;Name=PDP77504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955985.1;locus_tag=CLI76_03735;product=hypothetical protein;protein_id=PDP77504.1;transl_table=11 NSLT01000013.1 Genbank gene 2953 4410 . + . ID=gene-CLI76_03740;Name=CLI76_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03740 NSLT01000013.1 Protein Homology CDS 2953 4410 . + 0 ID=cds-PDP77505.1;Parent=gene-CLI76_03740;Dbxref=NCBI_GP:PDP77505.1;Name=PDP77505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816162.1;locus_tag=CLI76_03740;product=internalin;protein_id=PDP77505.1;transl_table=11 NSLT01000013.1 Genbank gene 4505 5275 . - . ID=gene-CLI76_03745;Name=CLI76_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03745 NSLT01000013.1 Protein Homology CDS 4505 5275 . - 0 ID=cds-PDP77506.1;Parent=gene-CLI76_03745;Dbxref=NCBI_GP:PDP77506.1;Name=PDP77506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873802.1;locus_tag=CLI76_03745;product=HAD family hydrolase;protein_id=PDP77506.1;transl_table=11 NSLT01000013.1 Genbank gene 5275 7371 . - . ID=gene-CLI76_03750;Name=CLI76_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03750 NSLT01000013.1 Protein Homology CDS 5275 7371 . - 0 ID=cds-PDP77507.1;Parent=gene-CLI76_03750;Dbxref=NCBI_GP:PDP77507.1;Name=PDP77507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816160.1;locus_tag=CLI76_03750;product=ATP-dependent DNA helicase RecG;protein_id=PDP77507.1;transl_table=11 NSLT01000013.1 Genbank gene 7414 8442 . - . ID=gene-CLI76_03755;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CLI76_03755 NSLT01000013.1 Protein Homology CDS 7414 8442 . - 0 ID=cds-PDP77508.1;Parent=gene-CLI76_03755;Dbxref=NCBI_GP:PDP77508.1;Name=PDP77508.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584830.1;locus_tag=CLI76_03755;product=UDP-glucose 4-epimerase GalE;protein_id=PDP77508.1;transl_table=11 NSLT01000013.1 Genbank gene 8452 9057 . - . ID=gene-CLI76_03760;Name=CLI76_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03760 NSLT01000013.1 Protein Homology CDS 8452 9057 . - 0 ID=cds-PDP77509.1;Parent=gene-CLI76_03760;Dbxref=NCBI_GP:PDP77509.1;Name=PDP77509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964287.1;locus_tag=CLI76_03760;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=PDP77509.1;transl_table=11 NSLT01000013.1 Genbank gene 9158 9751 . + . ID=gene-CLI76_03765;Name=CLI76_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03765 NSLT01000013.1 Protein Homology CDS 9158 9751 . + 0 ID=cds-PDP77510.1;Parent=gene-CLI76_03765;Dbxref=NCBI_GP:PDP77510.1;Name=PDP77510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964286.1;locus_tag=CLI76_03765;product=hypothetical protein;protein_id=PDP77510.1;transl_table=11 NSLT01000013.1 Genbank gene 9754 11223 . + . ID=gene-CLI76_03770;Name=CLI76_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03770 NSLT01000013.1 Protein Homology CDS 9754 11223 . + 0 ID=cds-PDP77511.1;Parent=gene-CLI76_03770;Dbxref=NCBI_GP:PDP77511.1;Name=PDP77511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964285.1;locus_tag=CLI76_03770;product=calcineurin;protein_id=PDP77511.1;transl_table=11 NSLT01000013.1 Genbank gene 11386 12585 . + . ID=gene-CLI76_03775;Name=megL;gbkey=Gene;gene=megL;gene_biotype=protein_coding;locus_tag=CLI76_03775 NSLT01000013.1 Protein Homology CDS 11386 12585 . + 0 ID=cds-PDP77512.1;Parent=gene-CLI76_03775;Dbxref=NCBI_GP:PDP77512.1;Name=PDP77512.1;gbkey=CDS;gene=megL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816157.1;locus_tag=CLI76_03775;product=methionine gamma-lyase;protein_id=PDP77512.1;transl_table=11 NSLT01000013.1 Genbank direct_repeat 13397 13566 . + . ID=id-NSLT01000013.1:13397..13566;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=13399..13434;rpt_unit_seq=gttgtgtgtacccttcgaatagagggtagatccaac NSLT01000013.1 Genbank gene 13776 14321 . - . ID=gene-CLI76_03780;Name=CLI76_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03780 NSLT01000013.1 Protein Homology CDS 13776 14321 . - 0 ID=cds-PDP77513.1;Parent=gene-CLI76_03780;Dbxref=NCBI_GP:PDP77513.1;Name=PDP77513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955981.1;locus_tag=CLI76_03780;product=hypothetical protein;protein_id=PDP77513.1;transl_table=11 NSLT01000013.1 Genbank gene 14326 17853 . - . ID=gene-CLI76_03785;Name=CLI76_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03785 NSLT01000013.1 Protein Homology CDS 14326 17853 . - 0 ID=cds-PDP77514.1;Parent=gene-CLI76_03785;Dbxref=NCBI_GP:PDP77514.1;Name=PDP77514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584823.1;locus_tag=CLI76_03785;product=hypothetical protein;protein_id=PDP77514.1;transl_table=11 NSLT01000013.1 Genbank gene 18141 18710 . + . ID=gene-CLI76_03790;Name=CLI76_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03790 NSLT01000013.1 Protein Homology CDS 18141 18710 . + 0 ID=cds-PDP77515.1;Parent=gene-CLI76_03790;Dbxref=NCBI_GP:PDP77515.1;Name=PDP77515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584821.1;locus_tag=CLI76_03790;product=hypothetical protein;protein_id=PDP77515.1;transl_table=11 NSLT01000013.1 Genbank gene 18730 19632 . + . ID=gene-CLI76_03795;Name=CLI76_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03795 NSLT01000013.1 Protein Homology CDS 18730 19632 . + 0 ID=cds-PDP77516.1;Parent=gene-CLI76_03795;Dbxref=NCBI_GP:PDP77516.1;Name=PDP77516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584820.1;locus_tag=CLI76_03795;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PDP77516.1;transl_table=11 NSLT01000013.1 Genbank gene 19685 20644 . + . ID=gene-CLI76_03800;Name=CLI76_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03800 NSLT01000013.1 Protein Homology CDS 19685 20644 . + 0 ID=cds-PDP77517.1;Parent=gene-CLI76_03800;Dbxref=NCBI_GP:PDP77517.1;Name=PDP77517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816153.1;locus_tag=CLI76_03800;product=glycosyltransferase;protein_id=PDP77517.1;transl_table=11 NSLT01000013.1 Genbank gene 20655 21563 . - . ID=gene-CLI76_03805;Name=CLI76_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03805 NSLT01000013.1 Protein Homology CDS 20655 21563 . - 0 ID=cds-PDP77518.1;Parent=gene-CLI76_03805;Dbxref=NCBI_GP:PDP77518.1;Name=PDP77518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874161.1;locus_tag=CLI76_03805;product=EamA/RhaT family transporter;protein_id=PDP77518.1;transl_table=11 NSLT01000013.1 Genbank gene 21791 23767 . - . ID=gene-CLI76_03810;Name=CLI76_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03810 NSLT01000013.1 Protein Homology CDS 21791 23767 . - 0 ID=cds-PDP77519.1;Parent=gene-CLI76_03810;Dbxref=NCBI_GP:PDP77519.1;Name=PDP77519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874185.1;locus_tag=CLI76_03810;product=transcription termination factor Rho;protein_id=PDP77519.1;transl_table=11 NSLT01000013.1 Genbank gene 24443 24961 . + . ID=gene-CLI76_03815;Name=CLI76_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03815 NSLT01000013.1 Protein Homology CDS 24443 24961 . + 0 ID=cds-PDP77520.1;Parent=gene-CLI76_03815;Dbxref=NCBI_GP:PDP77520.1;Name=PDP77520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964274.1;locus_tag=CLI76_03815;product=histidinol phosphate phosphatase;protein_id=PDP77520.1;transl_table=11 NSLT01000013.1 Genbank gene 24994 25989 . + . ID=gene-CLI76_03820;Name=CLI76_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03820 NSLT01000013.1 Protein Homology CDS 24994 25989 . + 0 ID=cds-PDP77521.1;Parent=gene-CLI76_03820;Dbxref=NCBI_GP:PDP77521.1;Name=PDP77521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458423.1;locus_tag=CLI76_03820;product=hypothetical protein;protein_id=PDP77521.1;transl_table=11 NSLT01000013.1 Genbank gene 26030 26932 . + . ID=gene-CLI76_03825;Name=ftcD;gbkey=Gene;gene=ftcD;gene_biotype=protein_coding;locus_tag=CLI76_03825 NSLT01000013.1 Protein Homology CDS 26030 26932 . + 0 ID=cds-PDP77522.1;Parent=gene-CLI76_03825;Dbxref=NCBI_GP:PDP77522.1;Name=PDP77522.1;gbkey=CDS;gene=ftcD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874204.1;locus_tag=CLI76_03825;product=glutamate formimidoyltransferase;protein_id=PDP77522.1;transl_table=11 NSLT01000013.1 Genbank gene 27033 28304 . + . ID=gene-CLI76_03830;Name=CLI76_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03830 NSLT01000013.1 Protein Homology CDS 27033 28304 . + 0 ID=cds-PDP77523.1;Parent=gene-CLI76_03830;Dbxref=NCBI_GP:PDP77523.1;Name=PDP77523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458424.1;locus_tag=CLI76_03830;product=imidazolonepropionase;protein_id=PDP77523.1;transl_table=11 NSLT01000013.1 Genbank gene 28398 29552 . + . ID=gene-CLI76_03835;Name=CLI76_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03835 NSLT01000013.1 Protein Homology CDS 28398 29552 . + 0 ID=cds-PDP77524.1;Parent=gene-CLI76_03835;Dbxref=NCBI_GP:PDP77524.1;Name=PDP77524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584812.1;locus_tag=CLI76_03835;product=hypothetical protein;protein_id=PDP77524.1;transl_table=11 NSLT01000013.1 Genbank gene 29572 30720 . + . ID=gene-CLI76_03840;Name=CLI76_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03840 NSLT01000013.1 Protein Homology CDS 29572 30720 . + 0 ID=cds-PDP77525.1;Parent=gene-CLI76_03840;Dbxref=NCBI_GP:PDP77525.1;Name=PDP77525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458425.1;locus_tag=CLI76_03840;product=porin;protein_id=PDP77525.1;transl_table=11 NSLT01000013.1 Genbank gene 30745 31374 . + . ID=gene-CLI76_03845;Name=CLI76_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03845 NSLT01000013.1 Protein Homology CDS 30745 31374 . + 0 ID=cds-PDP77526.1;Parent=gene-CLI76_03845;Dbxref=NCBI_GP:PDP77526.1;Name=PDP77526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584810.1;locus_tag=CLI76_03845;product=methenyltetrahydrofolate cyclohydrolase;protein_id=PDP77526.1;transl_table=11 NSLT01000013.1 Genbank gene 31377 32870 . + . ID=gene-CLI76_03850;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CLI76_03850 NSLT01000013.1 Protein Homology CDS 31377 32870 . + 0 ID=cds-PDP77527.1;Parent=gene-CLI76_03850;Dbxref=NCBI_GP:PDP77527.1;Name=PDP77527.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964268.1;locus_tag=CLI76_03850;product=histidine ammonia-lyase;protein_id=PDP77527.1;transl_table=11 NSLT01000013.1 Genbank gene 33071 33400 . + . ID=gene-CLI76_03855;Name=CLI76_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03855 NSLT01000013.1 Protein Homology CDS 33071 33400 . + 0 ID=cds-PDP77528.1;Parent=gene-CLI76_03855;Dbxref=NCBI_GP:PDP77528.1;Name=PDP77528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816145.1;locus_tag=CLI76_03855;product=cupin domain-containing protein;protein_id=PDP77528.1;transl_table=11 NSLT01000013.1 Genbank gene 33523 34701 . - . ID=gene-CLI76_03860;Name=CLI76_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03860 NSLT01000013.1 Protein Homology CDS 33523 34701 . - 0 ID=cds-PDP77529.1;Parent=gene-CLI76_03860;Dbxref=NCBI_GP:PDP77529.1;Name=PDP77529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584807.1;locus_tag=CLI76_03860;product=dicarboxylate/amino acid:cation symporter;protein_id=PDP77529.1;transl_table=11 NSLT01000013.1 Genbank gene 34730 35836 . - . ID=gene-CLI76_03865;Name=CLI76_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03865 NSLT01000013.1 Protein Homology CDS 34730 35836 . - 0 ID=cds-PDP77530.1;Parent=gene-CLI76_03865;Dbxref=NCBI_GP:PDP77530.1;Name=PDP77530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584806.1;locus_tag=CLI76_03865;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=PDP77530.1;transl_table=11 NSLT01000013.1 Genbank gene 35912 37000 . - . ID=gene-CLI76_03870;Name=CLI76_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03870 NSLT01000013.1 Protein Homology CDS 35912 37000 . - 0 ID=cds-PDP77531.1;Parent=gene-CLI76_03870;Dbxref=NCBI_GP:PDP77531.1;Name=PDP77531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458429.1;locus_tag=CLI76_03870;product=hypothetical protein;protein_id=PDP77531.1;transl_table=11 NSLT01000013.1 Genbank gene 37032 37415 . - . ID=gene-CLI76_03875;Name=CLI76_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03875 NSLT01000013.1 Protein Homology CDS 37032 37415 . - 0 ID=cds-PDP77532.1;Parent=gene-CLI76_03875;Dbxref=NCBI_GP:PDP77532.1;Name=PDP77532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584804.1;locus_tag=CLI76_03875;product=DUF1573 domain-containing protein;protein_id=PDP77532.1;transl_table=11 NSLT01000013.1 Genbank gene 38027 40687 . + . ID=gene-CLI76_03880;Name=CLI76_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03880 NSLT01000013.1 Protein Homology CDS 38027 40687 . + 0 ID=cds-PDP77533.1;Parent=gene-CLI76_03880;Dbxref=NCBI_GP:PDP77533.1;Name=PDP77533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816143.1;locus_tag=CLI76_03880;product=peptidase M49;protein_id=PDP77533.1;transl_table=11 NSLT01000013.1 Genbank gene 40700 41971 . - . ID=gene-CLI76_03885;Name=CLI76_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03885 NSLT01000013.1 Protein Homology CDS 40700 41971 . - 0 ID=cds-PDP77534.1;Parent=gene-CLI76_03885;Dbxref=NCBI_GP:PDP77534.1;Name=PDP77534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874225.1;locus_tag=CLI76_03885;product=serine--tRNA ligase;protein_id=PDP77534.1;transl_table=11 NSLT01000013.1 Genbank gene 42071 42328 . - . ID=gene-CLI76_03890;Name=CLI76_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03890 NSLT01000013.1 Protein Homology CDS 42071 42328 . - 0 ID=cds-PDP77535.1;Parent=gene-CLI76_03890;Dbxref=NCBI_GP:PDP77535.1;Name=PDP77535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842455.1;locus_tag=CLI76_03890;product=50S ribosomal protein L27;protein_id=PDP77535.1;transl_table=11 NSLT01000013.1 Genbank gene 42356 42673 . - . ID=gene-CLI76_03895;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CLI76_03895 NSLT01000013.1 Protein Homology CDS 42356 42673 . - 0 ID=cds-PDP77536.1;Parent=gene-CLI76_03895;Dbxref=NCBI_GP:PDP77536.1;Name=PDP77536.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709329.1;locus_tag=CLI76_03895;product=50S ribosomal protein L21;protein_id=PDP77536.1;transl_table=11 NSLT01000013.1 Genbank gene 42734 43042 . - . ID=gene-CLI76_03900;Name=CLI76_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03900 NSLT01000013.1 Protein Homology CDS 42734 43042 . - 0 ID=cds-PDP77537.1;Parent=gene-CLI76_03900;Dbxref=NCBI_GP:PDP77537.1;Name=PDP77537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955975.1;locus_tag=CLI76_03900;product=hypothetical protein;protein_id=PDP77537.1;transl_table=11 NSLT01000013.1 Genbank gene 43402 43941 . + . ID=gene-CLI76_03905;Name=CLI76_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03905 NSLT01000013.1 Protein Homology CDS 43402 43941 . + 0 ID=cds-PDP77538.1;Parent=gene-CLI76_03905;Dbxref=NCBI_GP:PDP77538.1;Name=PDP77538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874183.1;locus_tag=CLI76_03905;product=DUF4199 domain-containing protein;protein_id=PDP77538.1;transl_table=11 NSLT01000013.1 Genbank gene 43938 44891 . + . ID=gene-CLI76_03910;Name=CLI76_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03910 NSLT01000013.1 Protein Homology CDS 43938 44891 . + 0 ID=cds-PDP77539.1;Parent=gene-CLI76_03910;Dbxref=NCBI_GP:PDP77539.1;Name=PDP77539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874175.1;locus_tag=CLI76_03910;product=glycosyltransferase;protein_id=PDP77539.1;transl_table=11 NSLT01000013.1 Genbank gene 44891 45430 . + . ID=gene-CLI76_03915;Name=CLI76_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03915 NSLT01000013.1 Protein Homology CDS 44891 45430 . + 0 ID=cds-PDP77540.1;Parent=gene-CLI76_03915;Dbxref=NCBI_GP:PDP77540.1;Name=PDP77540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816138.1;locus_tag=CLI76_03915;product=nitroreductase;protein_id=PDP77540.1;transl_table=11 NSLT01000013.1 Genbank gene 45427 46440 . + . ID=gene-CLI76_03920;Name=CLI76_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03920 NSLT01000013.1 Protein Homology CDS 45427 46440 . + 0 ID=cds-PDP77541.1;Parent=gene-CLI76_03920;Dbxref=NCBI_GP:PDP77541.1;Name=PDP77541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964237.1;locus_tag=CLI76_03920;product=thiamine biosynthesis protein ApbE;protein_id=PDP77541.1;transl_table=11 NSLT01000013.1 Genbank gene 46625 47414 . - . ID=gene-CLI76_03925;Name=CLI76_03925;end_range=47414,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03925;partial=true NSLT01000013.1 Protein Homology CDS 46625 47414 . - 1 ID=cds-PDP77542.1;Parent=gene-CLI76_03925;Dbxref=NCBI_GP:PDP77542.1;Name=PDP77542.1;end_range=47414,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_03925;partial=true;product=IS3 family transposase;protein_id=PDP77542.1;transl_table=11 ##sequence-region NSLT01000140.1 1 1073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000140.1 Genbank region 1 1073 . + . ID=NSLT01000140.1:1..1073;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000140.1 Genbank gene 158 1060 . + . ID=gene-CLI76_10975;Name=CLI76_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10975 NSLT01000140.1 Protein Homology CDS 158 1060 . + 0 ID=cds-PDP76242.1;Parent=gene-CLI76_10975;Dbxref=NCBI_GP:PDP76242.1;Name=PDP76242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10975;product=IS982 family transposase;protein_id=PDP76242.1;transl_table=11 ##sequence-region NSLT01000141.1 1 1073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000141.1 Genbank region 1 1073 . + . ID=NSLT01000141.1:1..1073;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000141.1 Genbank gene 158 1060 . + . ID=gene-CLI76_10980;Name=CLI76_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10980 NSLT01000141.1 Protein Homology CDS 158 1060 . + 0 ID=cds-PDP76241.1;Parent=gene-CLI76_10980;Dbxref=NCBI_GP:PDP76241.1;Name=PDP76241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10980;product=IS982 family transposase IS195;protein_id=PDP76241.1;transl_table=11 ##sequence-region NSLT01000142.1 1 1048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000142.1 Genbank region 1 1048 . + . ID=NSLT01000142.1:1..1048;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000142.1 Genbank gene 201 1048 . + . ID=gene-CLI76_10985;Name=CLI76_10985;end_range=1048,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10985;partial=true NSLT01000142.1 Protein Homology CDS 201 1048 . + 0 ID=cds-PDP76240.1;Parent=gene-CLI76_10985;Dbxref=NCBI_GP:PDP76240.1;Name=PDP76240.1;end_range=1048,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10985;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76240.1;transl_table=11 ##sequence-region NSLT01000143.1 1 1048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000143.1 Genbank region 1 1048 . + . ID=NSLT01000143.1:1..1048;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000143.1 Genbank gene 201 1048 . + . ID=gene-CLI76_10990;Name=CLI76_10990;end_range=1048,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10990;partial=true NSLT01000143.1 Protein Homology CDS 201 1048 . + 0 ID=cds-PDP76239.1;Parent=gene-CLI76_10990;Dbxref=NCBI_GP:PDP76239.1;Name=PDP76239.1;end_range=1048,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10990;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76239.1;transl_table=11 ##sequence-region NSLT01000144.1 1 999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000144.1 Genbank region 1 999 . + . ID=NSLT01000144.1:1..999;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000144.1 Genbank gene 1 572 . + . ID=gene-CLI76_10995;Name=CLI76_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10995;partial=true;start_range=.,1 NSLT01000144.1 Protein Homology CDS 1 572 . + 2 ID=cds-PDP76237.1;Parent=gene-CLI76_10995;Dbxref=NCBI_GP:PDP76237.1;Name=PDP76237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10995;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76237.1;start_range=.,1;transl_table=11 NSLT01000144.1 Genbank gene 732 999 . + . ID=gene-CLI76_11000;Name=CLI76_11000;end_range=999,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11000;partial=true NSLT01000144.1 Protein Homology CDS 732 999 . + 0 ID=cds-PDP76238.1;Parent=gene-CLI76_11000;Dbxref=NCBI_GP:PDP76238.1;Name=PDP76238.1;end_range=999,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874645.1;locus_tag=CLI76_11000;partial=true;product=conjugal transfer protein;protein_id=PDP76238.1;transl_table=11 ##sequence-region NSLT01000145.1 1 948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000145.1 Genbank region 1 948 . + . ID=NSLT01000145.1:1..948;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000145.1 Genbank gene 1 342 . + . ID=gene-CLI76_11005;Name=CLI76_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11005;partial=true;start_range=.,1 NSLT01000145.1 Protein Homology CDS 1 342 . + 0 ID=cds-PDP76235.1;Parent=gene-CLI76_11005;Dbxref=NCBI_GP:PDP76235.1;Name=PDP76235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458129.1;locus_tag=CLI76_11005;partial=true;product=glycosyl transferase family 2;protein_id=PDP76235.1;start_range=.,1;transl_table=11 NSLT01000145.1 Genbank gene 453 948 . + . ID=gene-CLI76_11010;Name=CLI76_11010;end_range=948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11010;partial=true NSLT01000145.1 Protein Homology CDS 453 948 . + 0 ID=cds-PDP76236.1;Parent=gene-CLI76_11010;Dbxref=NCBI_GP:PDP76236.1;Name=PDP76236.1;end_range=948,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458128.1;locus_tag=CLI76_11010;partial=true;product=antioxidant%2C AhpC/TSA family protein;protein_id=PDP76236.1;transl_table=11 ##sequence-region NSLT01000146.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000146.1 Genbank region 1 937 . + . ID=NSLT01000146.1:1..937;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000146.1 Genbank pseudogene 1 404 . + . ID=gene-CLI76_11015;Name=CLI76_11015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11015;pseudo=true NSLT01000146.1 Protein Homology CDS 1 404 . + 2 ID=cds-CLI76_11015;Parent=gene-CLI76_11015;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458556.1;locus_tag=CLI76_11015;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NSLT01000146.1 Genbank gene 743 937 . - . ID=gene-CLI76_11020;Name=CLI76_11020;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11020;partial=true NSLT01000146.1 Protein Homology CDS 743 937 . - 0 ID=cds-PDP76234.1;Parent=gene-CLI76_11020;Dbxref=NCBI_GP:PDP76234.1;Name=PDP76234.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11020;partial=true;product=IS3 family transposase;protein_id=PDP76234.1;transl_table=11 ##sequence-region NSLT01000147.1 1 928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000147.1 Genbank region 1 928 . + . ID=NSLT01000147.1:1..928;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000147.1 Genbank gene 1 928 . + . ID=gene-CLI76_11025;Name=CLI76_11025;end_range=928,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11025;partial=true;start_range=.,1 NSLT01000147.1 Protein Homology CDS 1 928 . + 0 ID=cds-PDP76233.1;Parent=gene-CLI76_11025;Dbxref=NCBI_GP:PDP76233.1;Name=PDP76233.1;end_range=928,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009752254.1;locus_tag=CLI76_11025;partial=true;product=helicase;protein_id=PDP76233.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000148.1 1 914 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000148.1 Genbank region 1 914 . + . ID=NSLT01000148.1:1..914;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000148.1 Genbank pseudogene 1 914 . + . ID=gene-CLI76_11030;Name=CLI76_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11030;pseudo=true NSLT01000148.1 Protein Homology CDS 1 914 . + 1 ID=cds-CLI76_11030;Parent=gene-CLI76_11030;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331957.1;locus_tag=CLI76_11030;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000149.1 1 911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000149.1 Genbank region 1 911 . + . ID=NSLT01000149.1:1..911;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000149.1 Genbank gene 1 444 . + . ID=gene-CLI76_11035;Name=CLI76_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11035;partial=true;start_range=.,1 NSLT01000149.1 Protein Homology CDS 1 444 . + 0 ID=cds-PDP76232.1;Parent=gene-CLI76_11035;Dbxref=NCBI_GP:PDP76232.1;Name=PDP76232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_11035;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76232.1;start_range=.,1;transl_table=11 NSLT01000149.1 Genbank pseudogene 587 911 . + . ID=gene-CLI76_11040;Name=CLI76_11040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11040;pseudo=true NSLT01000149.1 Protein Homology CDS 587 911 . + 0 ID=cds-CLI76_11040;Parent=gene-CLI76_11040;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11040;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000014.1 1 47021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000014.1 Genbank region 1 47021 . + . ID=NSLT01000014.1:1..47021;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000014.1 Genbank pseudogene 3 782 . + . ID=gene-CLI76_03930;Name=CLI76_03930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03930;pseudo=true NSLT01000014.1 Protein Homology CDS 3 782 . + 0 ID=cds-CLI76_03930;Parent=gene-CLI76_03930;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_03930;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLT01000014.1 Genbank pseudogene 807 932 . + . ID=gene-CLI76_03935;Name=CLI76_03935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03935;pseudo=true NSLT01000014.1 Protein Homology CDS 807 932 . + 0 ID=cds-CLI76_03935;Parent=gene-CLI76_03935;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_03935;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000014.1 Genbank pseudogene 1039 1295 . - . ID=gene-CLI76_03940;Name=CLI76_03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03940;pseudo=true NSLT01000014.1 Protein Homology CDS 1039 1295 . - 0 ID=cds-CLI76_03940;Parent=gene-CLI76_03940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874045.1;locus_tag=CLI76_03940;product=histidinol phosphate aminotransferase;pseudo=true;transl_table=11 NSLT01000014.1 Genbank gene 1569 2858 . - . ID=gene-CLI76_03945;Name=CLI76_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03945 NSLT01000014.1 Protein Homology CDS 1569 2858 . - 0 ID=cds-PDP77469.1;Parent=gene-CLI76_03945;Dbxref=NCBI_GP:PDP77469.1;Name=PDP77469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584614.1;locus_tag=CLI76_03945;product=MFS transporter;protein_id=PDP77469.1;transl_table=11 NSLT01000014.1 Genbank gene 2897 3856 . - . ID=gene-CLI76_03950;Name=CLI76_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03950 NSLT01000014.1 Protein Homology CDS 2897 3856 . - 0 ID=cds-PDP77470.1;Parent=gene-CLI76_03950;Dbxref=NCBI_GP:PDP77470.1;Name=PDP77470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816009.1;locus_tag=CLI76_03950;product=dihydrofolate reductase;protein_id=PDP77470.1;transl_table=11 NSLT01000014.1 Genbank gene 4061 4780 . - . ID=gene-CLI76_03955;Name=CLI76_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03955 NSLT01000014.1 Protein Homology CDS 4061 4780 . - 0 ID=cds-PDP77471.1;Parent=gene-CLI76_03955;Dbxref=NCBI_GP:PDP77471.1;Name=PDP77471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816007.1;locus_tag=CLI76_03955;product=hypothetical protein;protein_id=PDP77471.1;transl_table=11 NSLT01000014.1 Genbank gene 4805 5677 . - . ID=gene-CLI76_03960;Name=CLI76_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03960 NSLT01000014.1 Protein Homology CDS 4805 5677 . - 0 ID=cds-PDP77472.1;Parent=gene-CLI76_03960;Dbxref=NCBI_GP:PDP77472.1;Name=PDP77472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816006.1;locus_tag=CLI76_03960;product=hypothetical protein;protein_id=PDP77472.1;transl_table=11 NSLT01000014.1 Genbank gene 5697 7442 . - . ID=gene-CLI76_03965;Name=CLI76_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03965 NSLT01000014.1 Protein Homology CDS 5697 7442 . - 0 ID=cds-PDP77473.1;Parent=gene-CLI76_03965;Dbxref=NCBI_GP:PDP77473.1;Name=PDP77473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816005.1;locus_tag=CLI76_03965;product=hypothetical protein;protein_id=PDP77473.1;transl_table=11 NSLT01000014.1 Genbank gene 7498 7980 . - . ID=gene-CLI76_03970;Name=CLI76_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03970 NSLT01000014.1 Protein Homology CDS 7498 7980 . - 0 ID=cds-PDP77474.1;Parent=gene-CLI76_03970;Dbxref=NCBI_GP:PDP77474.1;Name=PDP77474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874961.1;locus_tag=CLI76_03970;product=TlpA family protein disulfide reductase;protein_id=PDP77474.1;transl_table=11 NSLT01000014.1 Genbank gene 8506 8580 . + . ID=gene-CLI76_03975;Name=CLI76_03975;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_03975 NSLT01000014.1 tRNAscan-SE tRNA 8506 8580 . + . ID=rna-CLI76_03975;Parent=gene-CLI76_03975;anticodon=(pos:8538..8540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03975;product=tRNA-Met NSLT01000014.1 tRNAscan-SE exon 8506 8580 . + . ID=exon-CLI76_03975-1;Parent=rna-CLI76_03975;anticodon=(pos:8538..8540);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_03975;product=tRNA-Met NSLT01000014.1 Genbank gene 8912 10150 . - . ID=gene-CLI76_03980;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=CLI76_03980 NSLT01000014.1 Protein Homology CDS 8912 10150 . - 0 ID=cds-PDP77475.1;Parent=gene-CLI76_03980;Dbxref=NCBI_GP:PDP77475.1;Name=PDP77475.1;gbkey=CDS;gene=nqrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457259.1;locus_tag=CLI76_03980;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=PDP77475.1;transl_table=11 NSLT01000014.1 Genbank gene 10169 10783 . - . ID=gene-CLI76_03985;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=CLI76_03985 NSLT01000014.1 Protein Homology CDS 10169 10783 . - 0 ID=cds-PDP77476.1;Parent=gene-CLI76_03985;Dbxref=NCBI_GP:PDP77476.1;Name=PDP77476.1;gbkey=CDS;gene=nqrE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364974.1;locus_tag=CLI76_03985;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=PDP77476.1;transl_table=11 NSLT01000014.1 Genbank gene 10823 11452 . - . ID=gene-CLI76_03990;Name=nqrD;gbkey=Gene;gene=nqrD;gene_biotype=protein_coding;locus_tag=CLI76_03990 NSLT01000014.1 Protein Homology CDS 10823 11452 . - 0 ID=cds-PDP77477.1;Parent=gene-CLI76_03990;Dbxref=NCBI_GP:PDP77477.1;Name=PDP77477.1;gbkey=CDS;gene=nqrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005637998.1;locus_tag=CLI76_03990;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=PDP77477.1;transl_table=11 NSLT01000014.1 Genbank gene 11458 12192 . - . ID=gene-CLI76_03995;Name=CLI76_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03995 NSLT01000014.1 Protein Homology CDS 11458 12192 . - 0 ID=cds-PDP77478.1;Parent=gene-CLI76_03995;Dbxref=NCBI_GP:PDP77478.1;Name=PDP77478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965760.1;locus_tag=CLI76_03995;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=PDP77478.1;transl_table=11 NSLT01000014.1 Genbank gene 12216 13415 . - . ID=gene-CLI76_04000;Name=nqrB;gbkey=Gene;gene=nqrB;gene_biotype=protein_coding;locus_tag=CLI76_04000 NSLT01000014.1 Protein Homology CDS 12216 13415 . - 0 ID=cds-PDP77479.1;Parent=gene-CLI76_04000;Dbxref=NCBI_GP:PDP77479.1;Name=PDP77479.1;gbkey=CDS;gene=nqrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956516.1;locus_tag=CLI76_04000;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=PDP77479.1;transl_table=11 NSLT01000014.1 Genbank gene 13446 14801 . - . ID=gene-CLI76_04005;Name=CLI76_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04005 NSLT01000014.1 Protein Homology CDS 13446 14801 . - 0 ID=cds-PDP77480.1;Parent=gene-CLI76_04005;Dbxref=NCBI_GP:PDP77480.1;Name=PDP77480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965762.1;locus_tag=CLI76_04005;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=PDP77480.1;transl_table=11 NSLT01000014.1 Genbank pseudogene 14896 14982 . + . ID=gene-CLI76_04010;Name=CLI76_04010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04010;pseudo=true NSLT01000014.1 Protein Homology CDS 14896 14982 . + 0 ID=cds-CLI76_04010;Parent=gene-CLI76_04010;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816080.1;locus_tag=CLI76_04010;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000014.1 Genbank gene 15579 16895 . - . ID=gene-CLI76_04015;Name=CLI76_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04015 NSLT01000014.1 Protein Homology CDS 15579 16895 . - 0 ID=cds-PDP77481.1;Parent=gene-CLI76_04015;Dbxref=NCBI_GP:PDP77481.1;Name=PDP77481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956517.1;locus_tag=CLI76_04015;product=energy transducer TonB;protein_id=PDP77481.1;transl_table=11 NSLT01000014.1 Genbank gene 16930 17310 . - . ID=gene-CLI76_04020;Name=CLI76_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04020 NSLT01000014.1 Protein Homology CDS 16930 17310 . - 0 ID=cds-PDP77482.1;Parent=gene-CLI76_04020;Dbxref=NCBI_GP:PDP77482.1;Name=PDP77482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584596.1;locus_tag=CLI76_04020;product=transcriptional regulator;protein_id=PDP77482.1;transl_table=11 NSLT01000014.1 Genbank gene 17402 18289 . - . ID=gene-CLI76_04025;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CLI76_04025 NSLT01000014.1 Protein Homology CDS 17402 18289 . - 0 ID=cds-PDP77483.1;Parent=gene-CLI76_04025;Dbxref=NCBI_GP:PDP77483.1;Name=PDP77483.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965767.1;locus_tag=CLI76_04025;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=PDP77483.1;transl_table=11 NSLT01000014.1 Genbank gene 18279 19427 . - . ID=gene-CLI76_04030;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CLI76_04030 NSLT01000014.1 Protein Homology CDS 18279 19427 . - 0 ID=cds-PDP77484.1;Parent=gene-CLI76_04030;Dbxref=NCBI_GP:PDP77484.1;Name=PDP77484.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965768.1;locus_tag=CLI76_04030;product=diaminopimelate decarboxylase;protein_id=PDP77484.1;transl_table=11 NSLT01000014.1 Genbank gene 19456 20796 . - . ID=gene-CLI76_04035;Name=CLI76_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04035 NSLT01000014.1 Protein Homology CDS 19456 20796 . - 0 ID=cds-PDP77485.1;Parent=gene-CLI76_04035;Dbxref=NCBI_GP:PDP77485.1;Name=PDP77485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815136.1;locus_tag=CLI76_04035;product=aspartate kinase;protein_id=PDP77485.1;transl_table=11 NSLT01000014.1 Genbank gene 20814 21554 . - . ID=gene-CLI76_04040;Name=CLI76_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04040 NSLT01000014.1 Protein Homology CDS 20814 21554 . - 0 ID=cds-PDP77486.1;Parent=gene-CLI76_04040;Dbxref=NCBI_GP:PDP77486.1;Name=PDP77486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874958.1;locus_tag=CLI76_04040;product=phosphonate ABC transporter ATP-binding protein;protein_id=PDP77486.1;transl_table=11 NSLT01000014.1 Genbank gene 21649 21891 . - . ID=gene-CLI76_04045;Name=CLI76_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04045 NSLT01000014.1 Protein Homology CDS 21649 21891 . - 0 ID=cds-PDP77487.1;Parent=gene-CLI76_04045;Dbxref=NCBI_GP:PDP77487.1;Name=PDP77487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584590.1;locus_tag=CLI76_04045;product=hypothetical protein;protein_id=PDP77487.1;transl_table=11 NSLT01000014.1 Genbank gene 21947 22960 . + . ID=gene-CLI76_04050;Name=CLI76_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04050 NSLT01000014.1 Protein Homology CDS 21947 22960 . + 0 ID=cds-PDP77488.1;Parent=gene-CLI76_04050;Dbxref=NCBI_GP:PDP77488.1;Name=PDP77488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584589.1;locus_tag=CLI76_04050;product=peptidase M24;protein_id=PDP77488.1;transl_table=11 NSLT01000014.1 Genbank gene 23441 24544 . + . ID=gene-CLI76_04055;Name=CLI76_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04055 NSLT01000014.1 Protein Homology CDS 23441 24544 . + 0 ID=cds-PDP77489.1;Parent=gene-CLI76_04055;Dbxref=NCBI_GP:PDP77489.1;Name=PDP77489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007661265.1;locus_tag=CLI76_04055;product=redox-regulated ATPase YchF;protein_id=PDP77489.1;transl_table=11 NSLT01000014.1 Genbank gene 24749 26770 . + . ID=gene-CLI76_04060;Name=CLI76_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04060 NSLT01000014.1 Protein Homology CDS 24749 26770 . + 0 ID=cds-PDP77490.1;Parent=gene-CLI76_04060;Dbxref=NCBI_GP:PDP77490.1;Name=PDP77490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583445.1;locus_tag=CLI76_04060;product=cell division protein FtsH;protein_id=PDP77490.1;transl_table=11 NSLT01000014.1 Genbank gene 26799 27653 . + . ID=gene-CLI76_04065;Name=CLI76_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04065 NSLT01000014.1 Protein Homology CDS 26799 27653 . + 0 ID=cds-PDP77491.1;Parent=gene-CLI76_04065;Dbxref=NCBI_GP:PDP77491.1;Name=PDP77491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965734.1;locus_tag=CLI76_04065;product=phosphatidate cytidylyltransferase;protein_id=PDP77491.1;transl_table=11 NSLT01000014.1 Genbank gene 27836 29890 . - . ID=gene-CLI76_04070;Name=CLI76_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04070 NSLT01000014.1 Protein Homology CDS 27836 29890 . - 0 ID=cds-PDP77492.1;Parent=gene-CLI76_04070;Dbxref=NCBI_GP:PDP77492.1;Name=PDP77492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873540.1;locus_tag=CLI76_04070;product=molecular chaperone HtpG;protein_id=PDP77492.1;transl_table=11 NSLT01000014.1 Genbank gene 29887 30144 . - . ID=gene-CLI76_04075;Name=CLI76_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04075 NSLT01000014.1 Protein Homology CDS 29887 30144 . - 0 ID=cds-PDP77493.1;Parent=gene-CLI76_04075;Dbxref=NCBI_GP:PDP77493.1;Name=PDP77493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873537.1;locus_tag=CLI76_04075;product=hypothetical protein;protein_id=PDP77493.1;transl_table=11 NSLT01000014.1 Genbank gene 30547 32880 . - . ID=gene-CLI76_04080;Name=CLI76_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04080 NSLT01000014.1 Protein Homology CDS 30547 32880 . - 0 ID=cds-PDP77494.1;Parent=gene-CLI76_04080;Dbxref=NCBI_GP:PDP77494.1;Name=PDP77494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873538.1;locus_tag=CLI76_04080;product=beta-hexosaminidase;protein_id=PDP77494.1;transl_table=11 NSLT01000014.1 Genbank gene 33038 34318 . - . ID=gene-CLI76_04085;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CLI76_04085 NSLT01000014.1 Protein Homology CDS 33038 34318 . - 0 ID=cds-PDP77495.1;Parent=gene-CLI76_04085;Dbxref=NCBI_GP:PDP77495.1;Name=PDP77495.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007835317.1;locus_tag=CLI76_04085;product=serine hydroxymethyltransferase;protein_id=PDP77495.1;transl_table=11 NSLT01000014.1 Genbank pseudogene 34893 35143 . - . ID=gene-CLI76_04090;Name=CLI76_04090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04090;pseudo=true NSLT01000014.1 Protein Homology CDS 34893 35143 . - 0 ID=cds-CLI76_04090;Parent=gene-CLI76_04090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583437.1;locus_tag=CLI76_04090;product=transposase;pseudo=true;transl_table=11 NSLT01000014.1 Genbank gene 35549 35914 . - . ID=gene-CLI76_04095;Name=CLI76_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04095 NSLT01000014.1 Protein Homology CDS 35549 35914 . - 0 ID=cds-PDP77496.1;Parent=gene-CLI76_04095;Dbxref=NCBI_GP:PDP77496.1;Name=PDP77496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583436.1;locus_tag=CLI76_04095;product=50S ribosomal protein L19;protein_id=PDP77496.1;transl_table=11 NSLT01000014.1 Genbank gene 36193 39879 . + . ID=gene-CLI76_04100;Name=CLI76_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04100 NSLT01000014.1 Protein Homology CDS 36193 39879 . + 0 ID=cds-PDP77497.1;Parent=gene-CLI76_04100;Dbxref=NCBI_GP:PDP77497.1;Name=PDP77497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457185.1;locus_tag=CLI76_04100;product=DNA polymerase III subunit alpha;protein_id=PDP77497.1;transl_table=11 NSLT01000014.1 Genbank gene 39928 40242 . + . ID=gene-CLI76_04105;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CLI76_04105 NSLT01000014.1 Protein Homology CDS 39928 40242 . + 0 ID=cds-PDP77498.1;Parent=gene-CLI76_04105;Dbxref=NCBI_GP:PDP77498.1;Name=PDP77498.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583434.1;locus_tag=CLI76_04105;product=thioredoxin;protein_id=PDP77498.1;transl_table=11 NSLT01000014.1 Genbank gene 40937 42235 . + . ID=gene-CLI76_04110;Name=CLI76_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04110 NSLT01000014.1 Protein Homology CDS 40937 42235 . + 0 ID=cds-PDP77499.1;Parent=gene-CLI76_04110;Dbxref=NCBI_GP:PDP77499.1;Name=PDP77499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815124.1;locus_tag=CLI76_04110;product=DNA recombination protein RmuC;protein_id=PDP77499.1;transl_table=11 NSLT01000014.1 Genbank gene 42265 44850 . + . ID=gene-CLI76_04115;Name=CLI76_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04115 NSLT01000014.1 Protein Homology CDS 42265 44850 . + 0 ID=cds-PDP77500.1;Parent=gene-CLI76_04115;Dbxref=NCBI_GP:PDP77500.1;Name=PDP77500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965126.1;locus_tag=CLI76_04115;product=beta-mannosidase;protein_id=PDP77500.1;transl_table=11 NSLT01000014.1 Genbank pseudogene 44847 45477 . + . ID=gene-CLI76_04120;Name=CLI76_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04120;pseudo=true NSLT01000014.1 Protein Homology CDS 44847 45477 . + 0 ID=cds-CLI76_04120;Parent=gene-CLI76_04120;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965475.1;locus_tag=CLI76_04120;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000014.1 Genbank gene 45681 45902 . - . ID=gene-CLI76_04125;Name=CLI76_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04125 NSLT01000014.1 Protein Homology CDS 45681 45902 . - 0 ID=cds-PDP77501.1;Parent=gene-CLI76_04125;Dbxref=NCBI_GP:PDP77501.1;Name=PDP77501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583827.1;locus_tag=CLI76_04125;product=hypothetical protein;protein_id=PDP77501.1;transl_table=11 NSLT01000014.1 Genbank gene 46105 46581 . - . ID=gene-CLI76_04130;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CLI76_04130 NSLT01000014.1 Protein Homology CDS 46105 46581 . - 0 ID=cds-PDP77502.1;Parent=gene-CLI76_04130;Dbxref=NCBI_GP:PDP77502.1;Name=PDP77502.1;gbkey=CDS;gene=cdd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583429.1;locus_tag=CLI76_04130;product=cytidine deaminase;protein_id=PDP77502.1;transl_table=11 NSLT01000014.1 Genbank gene 46880 47021 . + . ID=gene-CLI76_04135;Name=CLI76_04135;end_range=47021,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04135;partial=true NSLT01000014.1 Protein Homology CDS 46880 47021 . + 0 ID=cds-PDP77503.1;Parent=gene-CLI76_04135;Dbxref=NCBI_GP:PDP77503.1;Name=PDP77503.1;end_range=47021,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956029.1;locus_tag=CLI76_04135;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77503.1;transl_table=11 ##sequence-region NSLT01000150.1 1 904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000150.1 Genbank region 1 904 . + . ID=NSLT01000150.1:1..904;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000150.1 Genbank gene 1 867 . - . ID=gene-CLI76_11045;Name=CLI76_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11045;partial=true;start_range=.,1 NSLT01000150.1 GeneMarkS+ CDS 1 867 . - 0 ID=cds-PDP76231.1;Parent=gene-CLI76_11045;Dbxref=NCBI_GP:PDP76231.1;Name=PDP76231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_11045;partial=true;product=helicase;protein_id=PDP76231.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000151.1 1 893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000151.1 Genbank region 1 893 . + . ID=NSLT01000151.1:1..893;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000151.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_11050;Name=CLI76_11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11050;pseudo=true NSLT01000151.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_11050;Parent=gene-CLI76_11050;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11050;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000151.1 Genbank pseudogene 553 885 . - . ID=gene-CLI76_11055;Name=CLI76_11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11055;pseudo=true NSLT01000151.1 Protein Homology CDS 553 885 . - 0 ID=cds-CLI76_11055;Parent=gene-CLI76_11055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815545.1;locus_tag=CLI76_11055;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000152.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000152.1 Genbank region 1 857 . + . ID=NSLT01000152.1:1..857;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000152.1 Genbank pseudogene 2 748 . + . ID=gene-CLI76_11060;Name=CLI76_11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11060;pseudo=true NSLT01000152.1 Protein Homology CDS 2 748 . + 0 ID=cds-CLI76_11060;Parent=gene-CLI76_11060;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11060;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000152.1 Genbank gene 745 857 . - . ID=gene-CLI76_11065;Name=CLI76_11065;end_range=857,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11065;partial=true NSLT01000152.1 Protein Homology CDS 745 857 . - 2 ID=cds-PDP76230.1;Parent=gene-CLI76_11065;Dbxref=NCBI_GP:PDP76230.1;Name=PDP76230.1;end_range=857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_11065;partial=true;product=ISAs1 family transposase;protein_id=PDP76230.1;transl_table=11 ##sequence-region NSLT01000153.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000153.1 Genbank region 1 845 . + . ID=NSLT01000153.1:1..845;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000153.1 Genbank gene 1 845 . + . ID=gene-CLI76_11070;Name=CLI76_11070;end_range=845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11070;partial=true;start_range=.,1 NSLT01000153.1 Protein Homology CDS 1 845 . + 0 ID=cds-PDP76229.1;Parent=gene-CLI76_11070;Dbxref=NCBI_GP:PDP76229.1;Name=PDP76229.1;end_range=845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458292.1;locus_tag=CLI76_11070;partial=true;product=peptidase C25;protein_id=PDP76229.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000154.1 1 844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000154.1 Genbank region 1 844 . + . ID=NSLT01000154.1:1..844;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000154.1 Genbank pseudogene 162 844 . - . ID=gene-CLI76_11075;Name=CLI76_11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11075;pseudo=true NSLT01000154.1 Protein Homology CDS 162 844 . - 2 ID=cds-CLI76_11075;Parent=gene-CLI76_11075;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457816.1;locus_tag=CLI76_11075;product=GLPGLI family protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000155.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000155.1 Genbank region 1 807 . + . ID=NSLT01000155.1:1..807;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000155.1 Genbank gene 1 265 . + . ID=gene-CLI76_11080;Name=CLI76_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11080;partial=true;start_range=.,1 NSLT01000155.1 GeneMarkS+ CDS 1 265 . + 1 ID=cds-PDP76227.1;Parent=gene-CLI76_11080;Dbxref=NCBI_GP:PDP76227.1;Name=PDP76227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_11080;partial=true;product=hypothetical protein;protein_id=PDP76227.1;start_range=.,1;transl_table=11 NSLT01000155.1 Genbank gene 285 807 . - . ID=gene-CLI76_11085;Name=CLI76_11085;end_range=807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11085;partial=true NSLT01000155.1 Protein Homology CDS 285 807 . - 1 ID=cds-PDP76228.1;Parent=gene-CLI76_11085;Dbxref=NCBI_GP:PDP76228.1;Name=PDP76228.1;end_range=807,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964954.1;locus_tag=CLI76_11085;partial=true;product=relaxase;protein_id=PDP76228.1;transl_table=11 ##sequence-region NSLT01000156.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000156.1 Genbank region 1 788 . + . ID=NSLT01000156.1:1..788;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000156.1 Genbank gene 1 474 . - . ID=gene-CLI76_11090;Name=CLI76_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11090;partial=true;start_range=.,1 NSLT01000156.1 Protein Homology CDS 1 474 . - 0 ID=cds-PDP76225.1;Parent=gene-CLI76_11090;Dbxref=NCBI_GP:PDP76225.1;Name=PDP76225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458129.1;locus_tag=CLI76_11090;partial=true;product=glycosyl transferase family 2;protein_id=PDP76225.1;start_range=.,1;transl_table=11 NSLT01000156.1 Genbank gene 480 788 . - . ID=gene-CLI76_11095;Name=CLI76_11095;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11095;partial=true NSLT01000156.1 Protein Homology CDS 480 788 . - 0 ID=cds-PDP76226.1;Parent=gene-CLI76_11095;Dbxref=NCBI_GP:PDP76226.1;Name=PDP76226.1;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458130.1;locus_tag=CLI76_11095;partial=true;product=glycosyl transferase;protein_id=PDP76226.1;transl_table=11 ##sequence-region NSLT01000157.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000157.1 Genbank region 1 783 . + . ID=NSLT01000157.1:1..783;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000157.1 Genbank gene 1 783 . + . ID=gene-CLI76_11100;Name=CLI76_11100;end_range=783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11100;partial=true;start_range=.,1 NSLT01000157.1 Protein Homology CDS 1 783 . + 1 ID=cds-PDP76224.1;Parent=gene-CLI76_11100;Dbxref=NCBI_GP:PDP76224.1;Name=PDP76224.1;end_range=783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331957.1;locus_tag=CLI76_11100;partial=true;product=hypothetical protein;protein_id=PDP76224.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000158.1 1 766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000158.1 Genbank region 1 766 . + . ID=NSLT01000158.1:1..766;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000158.1 Genbank gene 1 661 . + . ID=gene-CLI76_11105;Name=CLI76_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11105;partial=true;start_range=.,1 NSLT01000158.1 Protein Homology CDS 1 661 . + 1 ID=cds-PDP76223.1;Parent=gene-CLI76_11105;Dbxref=NCBI_GP:PDP76223.1;Name=PDP76223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11105;partial=true;product=IS3 family transposase;protein_id=PDP76223.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000159.1 1 765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000159.1 Genbank region 1 765 . + . ID=NSLT01000159.1:1..765;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000159.1 Genbank gene 1 295 . - . ID=gene-CLI76_11110;Name=CLI76_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11110;partial=true;start_range=.,1 NSLT01000159.1 Protein Homology CDS 1 295 . - 0 ID=cds-PDP76221.1;Parent=gene-CLI76_11110;Dbxref=NCBI_GP:PDP76221.1;Name=PDP76221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585394.1;locus_tag=CLI76_11110;partial=true;product=conjugal transfer protein;protein_id=PDP76221.1;start_range=.,1;transl_table=11 NSLT01000159.1 Genbank gene 485 765 . - . ID=gene-CLI76_11115;Name=CLI76_11115;end_range=765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11115;partial=true NSLT01000159.1 Protein Homology CDS 485 765 . - 2 ID=cds-PDP76222.1;Parent=gene-CLI76_11115;Dbxref=NCBI_GP:PDP76222.1;Name=PDP76222.1;end_range=765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816538.1;locus_tag=CLI76_11115;partial=true;product=hypothetical protein;protein_id=PDP76222.1;transl_table=11 ##sequence-region NSLT01000015.1 1 45833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000015.1 Genbank region 1 45833 . + . ID=NSLT01000015.1:1..45833;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000015.1 Genbank gene 1 1084 . - . ID=gene-CLI76_04140;Name=CLI76_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04140;partial=true;start_range=.,1 NSLT01000015.1 Protein Homology CDS 1 1084 . - 0 ID=cds-PDP77432.1;Parent=gene-CLI76_04140;Dbxref=NCBI_GP:PDP77432.1;Name=PDP77432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_04140;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77432.1;start_range=.,1;transl_table=11 NSLT01000015.1 Genbank gene 1410 2003 . - . ID=gene-CLI76_04145;Name=CLI76_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04145 NSLT01000015.1 Protein Homology CDS 1410 2003 . - 0 ID=cds-PDP77433.1;Parent=gene-CLI76_04145;Dbxref=NCBI_GP:PDP77433.1;Name=PDP77433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585221.1;locus_tag=CLI76_04145;product=indolepyruvate oxidoreductase;protein_id=PDP77433.1;transl_table=11 NSLT01000015.1 Genbank gene 2030 3637 . - . ID=gene-CLI76_04150;Name=CLI76_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04150 NSLT01000015.1 Protein Homology CDS 2030 3637 . - 0 ID=cds-PDP77434.1;Parent=gene-CLI76_04150;Dbxref=NCBI_GP:PDP77434.1;Name=PDP77434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816399.1;locus_tag=CLI76_04150;product=indolepyruvate ferredoxin oxidoreductase;protein_id=PDP77434.1;transl_table=11 NSLT01000015.1 Genbank gene 3715 4476 . - . ID=gene-CLI76_04155;Name=CLI76_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04155 NSLT01000015.1 Protein Homology CDS 3715 4476 . - 0 ID=cds-PDP77435.1;Parent=gene-CLI76_04155;Dbxref=NCBI_GP:PDP77435.1;Name=PDP77435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816400.1;locus_tag=CLI76_04155;product=NAD(P)-dependent oxidoreductase;protein_id=PDP77435.1;transl_table=11 NSLT01000015.1 Genbank gene 4904 6097 . + . ID=gene-CLI76_04160;Name=CLI76_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04160 NSLT01000015.1 Protein Homology CDS 4904 6097 . + 0 ID=cds-PDP77436.1;Parent=gene-CLI76_04160;Dbxref=NCBI_GP:PDP77436.1;Name=PDP77436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225714.1;locus_tag=CLI76_04160;product=saccharopine dehydrogenase;protein_id=PDP77436.1;transl_table=11 NSLT01000015.1 Genbank gene 6130 6642 . + . ID=gene-CLI76_04165;Name=CLI76_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04165 NSLT01000015.1 Protein Homology CDS 6130 6642 . + 0 ID=cds-PDP77437.1;Parent=gene-CLI76_04165;Dbxref=NCBI_GP:PDP77437.1;Name=PDP77437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965566.1;locus_tag=CLI76_04165;product=pyrazinamidase;protein_id=PDP77437.1;transl_table=11 NSLT01000015.1 Genbank gene 6845 8179 . + . ID=gene-CLI76_04170;Name=CLI76_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04170 NSLT01000015.1 Protein Homology CDS 6845 8179 . + 0 ID=cds-PDP77438.1;Parent=gene-CLI76_04170;Dbxref=NCBI_GP:PDP77438.1;Name=PDP77438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965565.1;locus_tag=CLI76_04170;product=transporter;protein_id=PDP77438.1;transl_table=11 NSLT01000015.1 Genbank gene 8219 9472 . + . ID=gene-CLI76_04175;Name=CLI76_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04175 NSLT01000015.1 Protein Homology CDS 8219 9472 . + 0 ID=cds-PDP77439.1;Parent=gene-CLI76_04175;Dbxref=NCBI_GP:PDP77439.1;Name=PDP77439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457723.1;locus_tag=CLI76_04175;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP77439.1;transl_table=11 NSLT01000015.1 Genbank gene 9654 9920 . - . ID=gene-CLI76_04180;Name=CLI76_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04180 NSLT01000015.1 Protein Homology CDS 9654 9920 . - 0 ID=cds-PDP77440.1;Parent=gene-CLI76_04180;Dbxref=NCBI_GP:PDP77440.1;Name=PDP77440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956105.1;locus_tag=CLI76_04180;product=hypothetical protein;protein_id=PDP77440.1;transl_table=11 NSLT01000015.1 Genbank gene 10122 12473 . + . ID=gene-CLI76_04185;Name=CLI76_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04185 NSLT01000015.1 Protein Homology CDS 10122 12473 . + 0 ID=cds-PDP77441.1;Parent=gene-CLI76_04185;Dbxref=NCBI_GP:PDP77441.1;Name=PDP77441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457725.1;locus_tag=CLI76_04185;product=ABC transporter permease;protein_id=PDP77441.1;transl_table=11 NSLT01000015.1 Genbank gene 12512 14878 . + . ID=gene-CLI76_04190;Name=CLI76_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04190 NSLT01000015.1 Protein Homology CDS 12512 14878 . + 0 ID=cds-PDP77442.1;Parent=gene-CLI76_04190;Dbxref=NCBI_GP:PDP77442.1;Name=PDP77442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965561.1;locus_tag=CLI76_04190;product=ABC transporter permease;protein_id=PDP77442.1;transl_table=11 NSLT01000015.1 Genbank gene 14905 17280 . + . ID=gene-CLI76_04195;Name=CLI76_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04195 NSLT01000015.1 Protein Homology CDS 14905 17280 . + 0 ID=cds-PDP77443.1;Parent=gene-CLI76_04195;Dbxref=NCBI_GP:PDP77443.1;Name=PDP77443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585230.1;locus_tag=CLI76_04195;product=ABC transporter permease;protein_id=PDP77443.1;transl_table=11 NSLT01000015.1 Genbank gene 17373 18032 . + . ID=gene-CLI76_04200;Name=CLI76_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04200 NSLT01000015.1 Protein Homology CDS 17373 18032 . + 0 ID=cds-PDP77444.1;Parent=gene-CLI76_04200;Dbxref=NCBI_GP:PDP77444.1;Name=PDP77444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585231.1;locus_tag=CLI76_04200;product=ABC transporter ATP-binding protein;protein_id=PDP77444.1;transl_table=11 NSLT01000015.1 Genbank gene 18338 19891 . - . ID=gene-CLI76_04205;Name=CLI76_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04205 NSLT01000015.1 Protein Homology CDS 18338 19891 . - 0 ID=cds-PDP77445.1;Parent=gene-CLI76_04205;Dbxref=NCBI_GP:PDP77445.1;Name=PDP77445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873549.1;locus_tag=CLI76_04205;product=diguanylate cyclase;protein_id=PDP77445.1;transl_table=11 NSLT01000015.1 Genbank gene 20370 21725 . - . ID=gene-CLI76_04210;Name=CLI76_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04210 NSLT01000015.1 Protein Homology CDS 20370 21725 . - 0 ID=cds-PDP77446.1;Parent=gene-CLI76_04210;Dbxref=NCBI_GP:PDP77446.1;Name=PDP77446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457729.1;locus_tag=CLI76_04210;product=succinate-semialdehyde dehydrogenase;protein_id=PDP77446.1;transl_table=11 NSLT01000015.1 Genbank gene 21921 23036 . - . ID=gene-CLI76_04215;Name=CLI76_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04215 NSLT01000015.1 Protein Homology CDS 21921 23036 . - 0 ID=cds-PDP77447.1;Parent=gene-CLI76_04215;Dbxref=NCBI_GP:PDP77447.1;Name=PDP77447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018357741.1;locus_tag=CLI76_04215;product=NAD-dependent alcohol dehydrogenase;protein_id=PDP77447.1;transl_table=11 NSLT01000015.1 Genbank gene 23087 24382 . - . ID=gene-CLI76_04220;Name=CLI76_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04220 NSLT01000015.1 Protein Homology CDS 23087 24382 . - 0 ID=cds-PDP77448.1;Parent=gene-CLI76_04220;Dbxref=NCBI_GP:PDP77448.1;Name=PDP77448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965552.1;locus_tag=CLI76_04220;product=4-hydroxybutyrate CoA-transferase;protein_id=PDP77448.1;transl_table=11 NSLT01000015.1 Genbank gene 24388 24672 . - . ID=gene-CLI76_04225;Name=CLI76_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04225 NSLT01000015.1 Protein Homology CDS 24388 24672 . - 0 ID=cds-PDP77449.1;Parent=gene-CLI76_04225;Dbxref=NCBI_GP:PDP77449.1;Name=PDP77449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816413.1;locus_tag=CLI76_04225;product=NifU family protein;protein_id=PDP77449.1;transl_table=11 NSLT01000015.1 Genbank gene 24745 26205 . - . ID=gene-CLI76_04230;Name=CLI76_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04230 NSLT01000015.1 Protein Homology CDS 24745 26205 . - 0 ID=cds-PDP77450.1;Parent=gene-CLI76_04230;Dbxref=NCBI_GP:PDP77450.1;Name=PDP77450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331893.1;locus_tag=CLI76_04230;product=4-hydroxybutyryl-CoA dehydratase;protein_id=PDP77450.1;transl_table=11 NSLT01000015.1 cmsearch riboswitch 26505 26708 . - . ID=id-NSLT01000015.1:26505..26708;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000015.1 Genbank gene 26906 28048 . - . ID=gene-CLI76_04235;Name=CLI76_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04235 NSLT01000015.1 Protein Homology CDS 26906 28048 . - 0 ID=cds-PDP77451.1;Parent=gene-CLI76_04235;Dbxref=NCBI_GP:PDP77451.1;Name=PDP77451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873620.1;locus_tag=CLI76_04235;product=outer membrane protein 40;protein_id=PDP77451.1;transl_table=11 NSLT01000015.1 Genbank gene 28095 29270 . - . ID=gene-CLI76_04240;Name=CLI76_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04240 NSLT01000015.1 Protein Homology CDS 28095 29270 . - 0 ID=cds-PDP77452.1;Parent=gene-CLI76_04240;Dbxref=NCBI_GP:PDP77452.1;Name=PDP77452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457733.1;locus_tag=CLI76_04240;product=outer membrane protein 41;protein_id=PDP77452.1;transl_table=11 NSLT01000015.1 Genbank gene 29576 30559 . - . ID=gene-CLI76_04245;Name=CLI76_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04245 NSLT01000015.1 Protein Homology CDS 29576 30559 . - 0 ID=cds-PDP77453.1;Parent=gene-CLI76_04245;Dbxref=NCBI_GP:PDP77453.1;Name=PDP77453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956106.1;locus_tag=CLI76_04245;product=DUF5106 domain-containing protein;protein_id=PDP77453.1;transl_table=11 NSLT01000015.1 Genbank gene 30591 33161 . - . ID=gene-CLI76_04250;Name=CLI76_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04250 NSLT01000015.1 Protein Homology CDS 30591 33161 . - 0 ID=cds-PDP77454.1;Parent=gene-CLI76_04250;Dbxref=NCBI_GP:PDP77454.1;Name=PDP77454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585243.1;locus_tag=CLI76_04250;product=alpha-glucan phosphorylase;protein_id=PDP77454.1;transl_table=11 NSLT01000015.1 Genbank gene 33371 33829 . - . ID=gene-CLI76_04255;Name=CLI76_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04255 NSLT01000015.1 Protein Homology CDS 33371 33829 . - 0 ID=cds-PDP77466.1;Parent=gene-CLI76_04255;Dbxref=NCBI_GP:PDP77466.1;Name=PDP77466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816420.1;locus_tag=CLI76_04255;product=hypothetical protein;protein_id=PDP77466.1;transl_table=11 NSLT01000015.1 Genbank gene 33765 34301 . + . ID=gene-CLI76_04260;Name=CLI76_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04260 NSLT01000015.1 Protein Homology CDS 33765 34301 . + 0 ID=cds-PDP77455.1;Parent=gene-CLI76_04260;Dbxref=NCBI_GP:PDP77455.1;Name=PDP77455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585247.1;locus_tag=CLI76_04260;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=PDP77455.1;transl_table=11 NSLT01000015.1 Genbank gene 34354 35391 . + . ID=gene-CLI76_04265;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CLI76_04265 NSLT01000015.1 Protein Homology CDS 34354 35391 . + 0 ID=cds-PDP77456.1;Parent=gene-CLI76_04265;Dbxref=NCBI_GP:PDP77456.1;Name=PDP77456.1;gbkey=CDS;gene=cobT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965583.1;locus_tag=CLI76_04265;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=PDP77456.1;transl_table=11 NSLT01000015.1 Genbank gene 35398 36180 . + . ID=gene-CLI76_04270;Name=CLI76_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04270 NSLT01000015.1 Protein Homology CDS 35398 36180 . + 0 ID=cds-PDP77457.1;Parent=gene-CLI76_04270;Dbxref=NCBI_GP:PDP77457.1;Name=PDP77457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585249.1;locus_tag=CLI76_04270;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=PDP77457.1;transl_table=11 NSLT01000015.1 Genbank gene 36182 36721 . + . ID=gene-CLI76_04275;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=CLI76_04275 NSLT01000015.1 Protein Homology CDS 36182 36721 . + 0 ID=cds-PDP77458.1;Parent=gene-CLI76_04275;Dbxref=NCBI_GP:PDP77458.1;Name=PDP77458.1;gbkey=CDS;gene=cobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457742.1;locus_tag=CLI76_04275;product=alpha-ribazole phosphatase;protein_id=PDP77458.1;transl_table=11 NSLT01000015.1 Genbank gene 36783 37607 . + . ID=gene-CLI76_04280;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CLI76_04280 NSLT01000015.1 Protein Homology CDS 36783 37607 . + 0 ID=cds-PDP77459.1;Parent=gene-CLI76_04280;Dbxref=NCBI_GP:PDP77459.1;Name=PDP77459.1;gbkey=CDS;gene=murI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585251.1;locus_tag=CLI76_04280;product=glutamate racemase;protein_id=PDP77459.1;transl_table=11 NSLT01000015.1 Genbank gene 37625 38056 . + . ID=gene-CLI76_04285;Name=CLI76_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04285 NSLT01000015.1 Protein Homology CDS 37625 38056 . + 0 ID=cds-PDP77467.1;Parent=gene-CLI76_04285;Dbxref=NCBI_GP:PDP77467.1;Name=PDP77467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457744.1;locus_tag=CLI76_04285;product=META domain-containing protein;protein_id=PDP77467.1;transl_table=11 NSLT01000015.1 Genbank gene 38290 40836 . - . ID=gene-CLI76_04290;Name=CLI76_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04290 NSLT01000015.1 Protein Homology CDS 38290 40836 . - 0 ID=cds-PDP77460.1;Parent=gene-CLI76_04290;Dbxref=NCBI_GP:PDP77460.1;Name=PDP77460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585254.1;locus_tag=CLI76_04290;product=TonB-dependent receptor;protein_id=PDP77460.1;transl_table=11 NSLT01000015.1 Genbank gene 41002 41832 . - . ID=gene-CLI76_04295;Name=CLI76_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04295 NSLT01000015.1 Protein Homology CDS 41002 41832 . - 0 ID=cds-PDP77461.1;Parent=gene-CLI76_04295;Dbxref=NCBI_GP:PDP77461.1;Name=PDP77461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585256.1;locus_tag=CLI76_04295;product=peptidylprolyl isomerase;protein_id=PDP77461.1;transl_table=11 NSLT01000015.1 Genbank gene 41860 42621 . - . ID=gene-CLI76_04300;Name=CLI76_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04300 NSLT01000015.1 Protein Homology CDS 41860 42621 . - 0 ID=cds-PDP77468.1;Parent=gene-CLI76_04300;Dbxref=NCBI_GP:PDP77468.1;Name=PDP77468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585257.1;locus_tag=CLI76_04300;product=peptidylprolyl isomerase;protein_id=PDP77468.1;transl_table=11 NSLT01000015.1 Genbank gene 42651 43238 . - . ID=gene-CLI76_04305;Name=CLI76_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04305 NSLT01000015.1 Protein Homology CDS 42651 43238 . - 0 ID=cds-PDP77462.1;Parent=gene-CLI76_04305;Dbxref=NCBI_GP:PDP77462.1;Name=PDP77462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585258.1;locus_tag=CLI76_04305;product=peptidylprolyl isomerase;protein_id=PDP77462.1;transl_table=11 NSLT01000015.1 Genbank gene 43988 44335 . - . ID=gene-CLI76_04310;Name=CLI76_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04310 NSLT01000015.1 Protein Homology CDS 43988 44335 . - 0 ID=cds-PDP77463.1;Parent=gene-CLI76_04310;Dbxref=NCBI_GP:PDP77463.1;Name=PDP77463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585261.1;locus_tag=CLI76_04310;product=diguanylate cyclase;protein_id=PDP77463.1;transl_table=11 NSLT01000015.1 Genbank gene 44357 44953 . - . ID=gene-CLI76_04315;Name=CLI76_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04315 NSLT01000015.1 Protein Homology CDS 44357 44953 . - 0 ID=cds-PDP77464.1;Parent=gene-CLI76_04315;Dbxref=NCBI_GP:PDP77464.1;Name=PDP77464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965571.1;locus_tag=CLI76_04315;product=type 1 glutamine amidotransferase;protein_id=PDP77464.1;transl_table=11 NSLT01000015.1 Genbank pseudogene 45136 45246 . - . ID=gene-CLI76_04320;Name=CLI76_04320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04320;pseudo=true NSLT01000015.1 Protein Homology CDS 45136 45246 . - 0 ID=cds-CLI76_04320;Parent=gene-CLI76_04320;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_04320;product=IS982 family transposase;pseudo=true;transl_table=11 NSLT01000015.1 Genbank gene 45720 45833 . - . ID=gene-CLI76_04325;Name=CLI76_04325;end_range=45833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04325;partial=true NSLT01000015.1 Protein Homology CDS 45720 45833 . - 0 ID=cds-PDP77465.1;Parent=gene-CLI76_04325;Dbxref=NCBI_GP:PDP77465.1;Name=PDP77465.1;end_range=45833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_04325;partial=true;product=ISAs1 family transposase;protein_id=PDP77465.1;transl_table=11 ##sequence-region NSLT01000160.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000160.1 Genbank region 1 764 . + . ID=NSLT01000160.1:1..764;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000160.1 Genbank gene 1 295 . - . ID=gene-CLI76_11120;Name=CLI76_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11120;partial=true;start_range=.,1 NSLT01000160.1 Protein Homology CDS 1 295 . - 0 ID=cds-PDP76219.1;Parent=gene-CLI76_11120;Dbxref=NCBI_GP:PDP76219.1;Name=PDP76219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004353760.1;locus_tag=CLI76_11120;partial=true;product=conjugal transfer protein;protein_id=PDP76219.1;start_range=.,1;transl_table=11 NSLT01000160.1 Genbank gene 484 764 . - . ID=gene-CLI76_11125;Name=CLI76_11125;end_range=764,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11125;partial=true NSLT01000160.1 Protein Homology CDS 484 764 . - 2 ID=cds-PDP76220.1;Parent=gene-CLI76_11125;Dbxref=NCBI_GP:PDP76220.1;Name=PDP76220.1;end_range=764,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816538.1;locus_tag=CLI76_11125;partial=true;product=hypothetical protein;protein_id=PDP76220.1;transl_table=11 ##sequence-region NSLT01000161.1 1 762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000161.1 Genbank region 1 762 . + . ID=NSLT01000161.1:1..762;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000161.1 Genbank gene 219 422 . - . ID=gene-CLI76_11130;Name=CLI76_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11130 NSLT01000161.1 GeneMarkS+ CDS 219 422 . - 0 ID=cds-PDP76217.1;Parent=gene-CLI76_11130;Dbxref=NCBI_GP:PDP76217.1;Name=PDP76217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_11130;product=hypothetical protein;protein_id=PDP76217.1;transl_table=11 NSLT01000161.1 Genbank gene 421 762 . + . ID=gene-CLI76_11135;Name=CLI76_11135;end_range=762,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11135;partial=true NSLT01000161.1 Protein Homology CDS 421 762 . + 0 ID=cds-PDP76218.1;Parent=gene-CLI76_11135;Dbxref=NCBI_GP:PDP76218.1;Name=PDP76218.1;end_range=762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007135650.1;locus_tag=CLI76_11135;partial=true;product=hypothetical protein;protein_id=PDP76218.1;transl_table=11 ##sequence-region NSLT01000162.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000162.1 Genbank region 1 745 . + . ID=NSLT01000162.1:1..745;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000162.1 Genbank pseudogene 128 592 . - . ID=gene-CLI76_11140;Name=CLI76_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11140;pseudo=true NSLT01000162.1 Protein Homology CDS 128 592 . - 0 ID=cds-CLI76_11140;Parent=gene-CLI76_11140;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_11140;product=IS982 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000163.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000163.1 Genbank region 1 711 . + . ID=NSLT01000163.1:1..711;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000163.1 Genbank pseudogene 6 137 . - . ID=gene-CLI76_11145;Name=CLI76_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11145;pseudo=true NSLT01000163.1 Protein Homology CDS 6 137 . - 0 ID=cds-CLI76_11145;Parent=gene-CLI76_11145;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911220.1;locus_tag=CLI76_11145;product=recombinase;pseudo=true;transl_table=11 ##sequence-region NSLT01000164.1 1 692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000164.1 Genbank region 1 692 . + . ID=NSLT01000164.1:1..692;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000164.1 Genbank gene 208 692 . - . ID=gene-CLI76_11150;Name=CLI76_11150;end_range=692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11150;partial=true NSLT01000164.1 Protein Homology CDS 208 692 . - 2 ID=cds-PDP76216.1;Parent=gene-CLI76_11150;Dbxref=NCBI_GP:PDP76216.1;Name=PDP76216.1;end_range=692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458561.1;locus_tag=CLI76_11150;partial=true;product=hypothetical protein;protein_id=PDP76216.1;transl_table=11 ##sequence-region NSLT01000165.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000165.1 Genbank region 1 691 . + . ID=NSLT01000165.1:1..691;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000165.1 Genbank pseudogene 13 552 . + . ID=gene-CLI76_11155;Name=CLI76_11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11155;pseudo=true NSLT01000165.1 Protein Homology CDS 13 552 . + 0 ID=cds-CLI76_11155;Parent=gene-CLI76_11155;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011979481.1;locus_tag=CLI76_11155;product=peptidase C14;pseudo=true;transl_table=11 ##sequence-region NSLT01000166.1 1 684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000166.1 Genbank region 1 684 . + . ID=NSLT01000166.1:1..684;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000166.1 Genbank gene 1 684 . - . ID=gene-CLI76_11160;Name=CLI76_11160;end_range=684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11160;partial=true;start_range=.,1 NSLT01000166.1 Protein Homology CDS 1 684 . - 2 ID=cds-PDP76215.1;Parent=gene-CLI76_11160;Dbxref=NCBI_GP:PDP76215.1;Name=PDP76215.1;end_range=684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964957.1;locus_tag=CLI76_11160;partial=true;product=ribulose 1%2C5-bisphosphate carboxylase;protein_id=PDP76215.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000167.1 1 674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000167.1 Genbank region 1 674 . + . ID=NSLT01000167.1:1..674;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000167.1 Genbank gene 98 286 . - . ID=gene-CLI76_11165;Name=CLI76_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11165 NSLT01000167.1 GeneMarkS+ CDS 98 286 . - 0 ID=cds-PDP76213.1;Parent=gene-CLI76_11165;Dbxref=NCBI_GP:PDP76213.1;Name=PDP76213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_11165;product=hypothetical protein;protein_id=PDP76213.1;transl_table=11 NSLT01000167.1 Genbank gene 358 552 . - . ID=gene-CLI76_11170;Name=CLI76_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11170 NSLT01000167.1 Protein Homology CDS 358 552 . - 0 ID=cds-PDP76214.1;Parent=gene-CLI76_11170;Dbxref=NCBI_GP:PDP76214.1;Name=PDP76214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956331.1;locus_tag=CLI76_11170;product=DNA-binding protein;protein_id=PDP76214.1;transl_table=11 ##sequence-region NSLT01000168.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000168.1 Genbank region 1 672 . + . ID=NSLT01000168.1:1..672;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000168.1 Genbank pseudogene 3 672 . + . ID=gene-CLI76_11175;Name=CLI76_11175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11175;pseudo=true NSLT01000168.1 Protein Homology CDS 3 672 . + 0 ID=cds-CLI76_11175;Parent=gene-CLI76_11175;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964959.1;locus_tag=CLI76_11175;product=phosphoribosyltransferase;pseudo=true;transl_table=11 ##sequence-region NSLT01000169.1 1 604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000169.1 Genbank region 1 604 . + . ID=NSLT01000169.1:1..604;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000169.1 Genbank gene 77 544 . - . ID=gene-CLI76_11180;Name=CLI76_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11180 NSLT01000169.1 Protein Homology CDS 77 544 . - 0 ID=cds-PDP76212.1;Parent=gene-CLI76_11180;Dbxref=NCBI_GP:PDP76212.1;Name=PDP76212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09407.8;locus_tag=CLI76_11180;product=hypothetical protein;protein_id=PDP76212.1;transl_table=11 ##sequence-region NSLT01000016.1 1 45739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000016.1 Genbank region 1 45739 . + . ID=NSLT01000016.1:1..45739;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000016.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_04330;Name=CLI76_04330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04330;pseudo=true NSLT01000016.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_04330;Parent=gene-CLI76_04330;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_04330;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000016.1 Genbank gene 598 2721 . + . ID=gene-CLI76_04335;Name=CLI76_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04335 NSLT01000016.1 Protein Homology CDS 598 2721 . + 0 ID=cds-PDP77397.1;Parent=gene-CLI76_04335;Dbxref=NCBI_GP:PDP77397.1;Name=PDP77397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815147.1;locus_tag=CLI76_04335;product=RecQ family ATP-dependent DNA helicase;protein_id=PDP77397.1;transl_table=11 NSLT01000016.1 Genbank gene 3207 4880 . + . ID=gene-CLI76_04340;Name=CLI76_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04340 NSLT01000016.1 Protein Homology CDS 3207 4880 . + 0 ID=cds-PDP77398.1;Parent=gene-CLI76_04340;Dbxref=NCBI_GP:PDP77398.1;Name=PDP77398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583455.1;locus_tag=CLI76_04340;product=long-chain fatty acid--CoA ligase;protein_id=PDP77398.1;transl_table=11 NSLT01000016.1 Genbank gene 5050 5262 . + . ID=gene-CLI76_04345;Name=CLI76_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04345 NSLT01000016.1 Protein Homology CDS 5050 5262 . + 0 ID=cds-PDP77399.1;Parent=gene-CLI76_04345;Dbxref=NCBI_GP:PDP77399.1;Name=PDP77399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583456.1;locus_tag=CLI76_04345;product=hypothetical protein;protein_id=PDP77399.1;transl_table=11 NSLT01000016.1 Genbank gene 5479 5982 . - . ID=gene-CLI76_04350;Name=CLI76_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04350 NSLT01000016.1 Protein Homology CDS 5479 5982 . - 0 ID=cds-PDP77400.1;Parent=gene-CLI76_04350;Dbxref=NCBI_GP:PDP77400.1;Name=PDP77400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583457.1;locus_tag=CLI76_04350;product=RNA polymerase sigma factor;protein_id=PDP77400.1;transl_table=11 NSLT01000016.1 Genbank gene 6119 6538 . + . ID=gene-CLI76_04355;Name=CLI76_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04355 NSLT01000016.1 Protein Homology CDS 6119 6538 . + 0 ID=cds-PDP77401.1;Parent=gene-CLI76_04355;Dbxref=NCBI_GP:PDP77401.1;Name=PDP77401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815149.1;locus_tag=CLI76_04355;product=DUF1232 domain-containing protein;protein_id=PDP77401.1;transl_table=11 NSLT01000016.1 Genbank gene 6754 8031 . + . ID=gene-CLI76_04360;Name=CLI76_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04360 NSLT01000016.1 Protein Homology CDS 6754 8031 . + 0 ID=cds-PDP77402.1;Parent=gene-CLI76_04360;Dbxref=NCBI_GP:PDP77402.1;Name=PDP77402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005468802.1;locus_tag=CLI76_04360;product=enolase;protein_id=PDP77402.1;transl_table=11 NSLT01000016.1 Genbank gene 8163 8777 . - . ID=gene-CLI76_04365;Name=CLI76_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04365 NSLT01000016.1 Protein Homology CDS 8163 8777 . - 0 ID=cds-PDP77431.1;Parent=gene-CLI76_04365;Dbxref=NCBI_GP:PDP77431.1;Name=PDP77431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583460.1;locus_tag=CLI76_04365;product=PorT family protein;protein_id=PDP77431.1;transl_table=11 NSLT01000016.1 Genbank gene 9023 9098 . + . ID=gene-CLI76_04370;Name=CLI76_04370;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_04370 NSLT01000016.1 tRNAscan-SE tRNA 9023 9098 . + . ID=rna-CLI76_04370;Parent=gene-CLI76_04370;anticodon=(pos:9056..9058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04370;product=tRNA-Lys NSLT01000016.1 tRNAscan-SE exon 9023 9098 . + . ID=exon-CLI76_04370-1;Parent=rna-CLI76_04370;anticodon=(pos:9056..9058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04370;product=tRNA-Lys NSLT01000016.1 Genbank gene 9663 10274 . + . ID=gene-CLI76_04375;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=CLI76_04375 NSLT01000016.1 Protein Homology CDS 9663 10274 . + 0 ID=cds-PDP77403.1;Parent=gene-CLI76_04375;Dbxref=NCBI_GP:PDP77403.1;Name=PDP77403.1;gbkey=CDS;gene=nrfH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956414.1;locus_tag=CLI76_04375;product=cytochrome c nitrite reductase small subunit;protein_id=PDP77403.1;transl_table=11 NSLT01000016.1 Genbank gene 10296 11792 . + . ID=gene-CLI76_04380;Name=CLI76_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04380 NSLT01000016.1 Protein Homology CDS 10296 11792 . + 0 ID=cds-PDP77404.1;Parent=gene-CLI76_04380;Dbxref=NCBI_GP:PDP77404.1;Name=PDP77404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583462.1;locus_tag=CLI76_04380;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=PDP77404.1;transl_table=11 NSLT01000016.1 Genbank gene 11863 13158 . + . ID=gene-CLI76_04385;Name=CLI76_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04385 NSLT01000016.1 Protein Homology CDS 11863 13158 . + 0 ID=cds-PDP77405.1;Parent=gene-CLI76_04385;Dbxref=NCBI_GP:PDP77405.1;Name=PDP77405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458503.1;locus_tag=CLI76_04385;product=hypothetical protein;protein_id=PDP77405.1;transl_table=11 NSLT01000016.1 Genbank gene 13151 13966 . + . ID=gene-CLI76_04390;Name=CLI76_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04390 NSLT01000016.1 Protein Homology CDS 13151 13966 . + 0 ID=cds-PDP77406.1;Parent=gene-CLI76_04390;Dbxref=NCBI_GP:PDP77406.1;Name=PDP77406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458504.1;locus_tag=CLI76_04390;product=cytochrome C assembly protein;protein_id=PDP77406.1;transl_table=11 NSLT01000016.1 Genbank gene 14235 14756 . + . ID=gene-CLI76_04395;Name=CLI76_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04395 NSLT01000016.1 Protein Homology CDS 14235 14756 . + 0 ID=cds-PDP77407.1;Parent=gene-CLI76_04395;Dbxref=NCBI_GP:PDP77407.1;Name=PDP77407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965263.1;locus_tag=CLI76_04395;product=flavodoxin family protein;protein_id=PDP77407.1;transl_table=11 NSLT01000016.1 Genbank gene 14753 15517 . + . ID=gene-CLI76_04400;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CLI76_04400 NSLT01000016.1 Protein Homology CDS 14753 15517 . + 0 ID=cds-PDP77408.1;Parent=gene-CLI76_04400;Dbxref=NCBI_GP:PDP77408.1;Name=PDP77408.1;gbkey=CDS;gene=kdsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458505.1;locus_tag=CLI76_04400;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=PDP77408.1;transl_table=11 NSLT01000016.1 Genbank gene 15559 17580 . + . ID=gene-CLI76_04405;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CLI76_04405 NSLT01000016.1 Protein Homology CDS 15559 17580 . + 0 ID=cds-PDP77409.1;Parent=gene-CLI76_04405;Dbxref=NCBI_GP:PDP77409.1;Name=PDP77409.1;gbkey=CDS;gene=dnaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965265.1;locus_tag=CLI76_04405;product=DNA primase;protein_id=PDP77409.1;transl_table=11 NSLT01000016.1 Genbank gene 17812 18039 . + . ID=gene-CLI76_04410;Name=CLI76_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04410 NSLT01000016.1 Protein Homology CDS 17812 18039 . + 0 ID=cds-PDP77410.1;Parent=gene-CLI76_04410;Dbxref=NCBI_GP:PDP77410.1;Name=PDP77410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583469.1;locus_tag=CLI76_04410;product=ferredoxin;protein_id=PDP77410.1;transl_table=11 NSLT01000016.1 Genbank gene 18058 19140 . + . ID=gene-CLI76_04415;Name=CLI76_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04415 NSLT01000016.1 Protein Homology CDS 18058 19140 . + 0 ID=cds-PDP77411.1;Parent=gene-CLI76_04415;Dbxref=NCBI_GP:PDP77411.1;Name=PDP77411.1;Note=catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815154.1;locus_tag=CLI76_04415;product=3-methyl-2-oxobutanoate dehydrogenase subunit VorB;protein_id=PDP77411.1;transl_table=11 NSLT01000016.1 Genbank gene 19161 19340 . + . ID=gene-CLI76_04420;Name=CLI76_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04420 NSLT01000016.1 Protein Homology CDS 19161 19340 . + 0 ID=cds-PDP77412.1;Parent=gene-CLI76_04420;Dbxref=NCBI_GP:PDP77412.1;Name=PDP77412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965267.1;locus_tag=CLI76_04420;product=hypothetical protein;protein_id=PDP77412.1;transl_table=11 NSLT01000016.1 Genbank gene 19357 20121 . + . ID=gene-CLI76_04425;Name=CLI76_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04425 NSLT01000016.1 Protein Homology CDS 19357 20121 . + 0 ID=cds-PDP77413.1;Parent=gene-CLI76_04425;Dbxref=NCBI_GP:PDP77413.1;Name=PDP77413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147357.1;locus_tag=CLI76_04425;product=2-oxoglutarate oxidoreductase;protein_id=PDP77413.1;transl_table=11 NSLT01000016.1 Genbank gene 20150 20695 . + . ID=gene-CLI76_04430;Name=CLI76_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04430 NSLT01000016.1 Protein Homology CDS 20150 20695 . + 0 ID=cds-PDP77414.1;Parent=gene-CLI76_04430;Dbxref=NCBI_GP:PDP77414.1;Name=PDP77414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458509.1;locus_tag=CLI76_04430;product=2-oxoglutarate ferredoxin oxidoreductase subunit gamma;protein_id=PDP77414.1;transl_table=11 NSLT01000016.1 Genbank gene 20943 23231 . + . ID=gene-CLI76_04435;Name=CLI76_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04435 NSLT01000016.1 Protein Homology CDS 20943 23231 . + 0 ID=cds-PDP77415.1;Parent=gene-CLI76_04435;Dbxref=NCBI_GP:PDP77415.1;Name=PDP77415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815156.1;locus_tag=CLI76_04435;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=PDP77415.1;transl_table=11 NSLT01000016.1 Genbank gene 23592 24068 . - . ID=gene-CLI76_04440;Name=CLI76_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04440 NSLT01000016.1 Protein Homology CDS 23592 24068 . - 0 ID=cds-PDP77416.1;Parent=gene-CLI76_04440;Dbxref=NCBI_GP:PDP77416.1;Name=PDP77416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583476.1;locus_tag=CLI76_04440;product=ATPase;protein_id=PDP77416.1;transl_table=11 NSLT01000016.1 Genbank gene 24123 25937 . - . ID=gene-CLI76_04445;Name=CLI76_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04445 NSLT01000016.1 Protein Homology CDS 24123 25937 . - 0 ID=cds-PDP77417.1;Parent=gene-CLI76_04445;Dbxref=NCBI_GP:PDP77417.1;Name=PDP77417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815157.1;locus_tag=CLI76_04445;product=ATPase;protein_id=PDP77417.1;transl_table=11 NSLT01000016.1 Genbank gene 25934 26548 . - . ID=gene-CLI76_04450;Name=CLI76_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04450 NSLT01000016.1 Protein Homology CDS 25934 26548 . - 0 ID=cds-PDP77418.1;Parent=gene-CLI76_04450;Dbxref=NCBI_GP:PDP77418.1;Name=PDP77418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583478.1;locus_tag=CLI76_04450;product=V-type ATP synthase subunit D;protein_id=PDP77418.1;transl_table=11 NSLT01000016.1 Genbank gene 26564 27883 . - . ID=gene-CLI76_04455;Name=CLI76_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04455 NSLT01000016.1 Protein Homology CDS 26564 27883 . - 0 ID=cds-PDP77419.1;Parent=gene-CLI76_04455;Dbxref=NCBI_GP:PDP77419.1;Name=PDP77419.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007560284.1;locus_tag=CLI76_04455;product=V-type ATP synthase subunit B;protein_id=PDP77419.1;transl_table=11 NSLT01000016.1 Genbank gene 27895 29649 . - . ID=gene-CLI76_04460;Name=CLI76_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04460 NSLT01000016.1 Protein Homology CDS 27895 29649 . - 0 ID=cds-PDP77420.1;Parent=gene-CLI76_04460;Dbxref=NCBI_GP:PDP77420.1;Name=PDP77420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857371.1;locus_tag=CLI76_04460;product=ATP synthase subunit A;protein_id=PDP77420.1;transl_table=11 NSLT01000016.1 Genbank gene 29659 30597 . - . ID=gene-CLI76_04465;Name=CLI76_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04465 NSLT01000016.1 Protein Homology CDS 29659 30597 . - 0 ID=cds-PDP77421.1;Parent=gene-CLI76_04465;Dbxref=NCBI_GP:PDP77421.1;Name=PDP77421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965749.1;locus_tag=CLI76_04465;product=DUF2764 domain-containing protein;protein_id=PDP77421.1;transl_table=11 NSLT01000016.1 Genbank gene 30601 31191 . - . ID=gene-CLI76_04470;Name=CLI76_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04470 NSLT01000016.1 Protein Homology CDS 30601 31191 . - 0 ID=cds-PDP77422.1;Parent=gene-CLI76_04470;Dbxref=NCBI_GP:PDP77422.1;Name=PDP77422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815158.1;locus_tag=CLI76_04470;product=hypothetical protein;protein_id=PDP77422.1;transl_table=11 NSLT01000016.1 Genbank gene 31390 31647 . - . ID=gene-CLI76_04475;Name=CLI76_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04475 NSLT01000016.1 Protein Homology CDS 31390 31647 . - 0 ID=cds-PDP77423.1;Parent=gene-CLI76_04475;Dbxref=NCBI_GP:PDP77423.1;Name=PDP77423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458514.1;locus_tag=CLI76_04475;product=hypothetical protein;protein_id=PDP77423.1;transl_table=11 NSLT01000016.1 Genbank gene 31951 33168 . + . ID=gene-CLI76_04480;Name=CLI76_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04480 NSLT01000016.1 Protein Homology CDS 31951 33168 . + 0 ID=cds-PDP77424.1;Parent=gene-CLI76_04480;Dbxref=NCBI_GP:PDP77424.1;Name=PDP77424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815161.1;locus_tag=CLI76_04480;product=secretion protein;protein_id=PDP77424.1;transl_table=11 NSLT01000016.1 Genbank gene 33248 36133 . - . ID=gene-CLI76_04485;Name=CLI76_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04485 NSLT01000016.1 Protein Homology CDS 33248 36133 . - 0 ID=cds-PDP77425.1;Parent=gene-CLI76_04485;Dbxref=NCBI_GP:PDP77425.1;Name=PDP77425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956408.1;locus_tag=CLI76_04485;product=ATPase;protein_id=PDP77425.1;transl_table=11 NSLT01000016.1 Genbank gene 36419 37240 . + . ID=gene-CLI76_04490;Name=CLI76_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04490 NSLT01000016.1 Protein Homology CDS 36419 37240 . + 0 ID=cds-PDP77426.1;Parent=gene-CLI76_04490;Dbxref=NCBI_GP:PDP77426.1;Name=PDP77426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874140.1;locus_tag=CLI76_04490;product=hypothetical protein;protein_id=PDP77426.1;transl_table=11 NSLT01000016.1 Genbank gene 37386 40166 . - . ID=gene-CLI76_04495;Name=CLI76_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04495 NSLT01000016.1 Protein Homology CDS 37386 40166 . - 0 ID=cds-PDP77427.1;Parent=gene-CLI76_04495;Dbxref=NCBI_GP:PDP77427.1;Name=PDP77427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964742.1;locus_tag=CLI76_04495;product=DNA polymerase I;protein_id=PDP77427.1;transl_table=11 NSLT01000016.1 Genbank gene 40216 42222 . - . ID=gene-CLI76_04500;Name=CLI76_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04500 NSLT01000016.1 Protein Homology CDS 40216 42222 . - 0 ID=cds-PDP77428.1;Parent=gene-CLI76_04500;Dbxref=NCBI_GP:PDP77428.1;Name=PDP77428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874136.1;locus_tag=CLI76_04500;product=1%2C4-alpha-glucan-branching enzyme;protein_id=PDP77428.1;transl_table=11 NSLT01000016.1 Genbank gene 42219 44522 . - . ID=gene-CLI76_04505;Name=CLI76_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04505 NSLT01000016.1 Protein Homology CDS 42219 44522 . - 0 ID=cds-PDP77429.1;Parent=gene-CLI76_04505;Dbxref=NCBI_GP:PDP77429.1;Name=PDP77429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874137.1;locus_tag=CLI76_04505;product=sodium:proton antiporter;protein_id=PDP77429.1;transl_table=11 NSLT01000016.1 Genbank gene 44950 45739 . - . ID=gene-CLI76_04510;Name=CLI76_04510;end_range=45739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04510;partial=true NSLT01000016.1 Protein Homology CDS 44950 45739 . - 1 ID=cds-PDP77430.1;Parent=gene-CLI76_04510;Dbxref=NCBI_GP:PDP77430.1;Name=PDP77430.1;end_range=45739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_04510;partial=true;product=IS3 family transposase;protein_id=PDP77430.1;transl_table=11 ##sequence-region NSLT01000170.1 1 592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000170.1 Genbank region 1 592 . + . ID=NSLT01000170.1:1..592;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000170.1 Genbank pseudogene 34 132 . - . ID=gene-CLI76_11185;Name=CLI76_11185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11185;pseudo=true NSLT01000170.1 Protein Homology CDS 34 132 . - 0 ID=cds-CLI76_11185;Parent=gene-CLI76_11185;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_11185;product=integrase;pseudo=true;transl_table=11 NSLT01000170.1 Genbank gene 484 592 . - . ID=gene-CLI76_11190;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI76_11190 NSLT01000170.1 cmsearch rRNA 484 592 . - . ID=rna-CLI76_11190;Parent=gene-CLI76_11190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_11190;product=5S ribosomal RNA NSLT01000170.1 cmsearch exon 484 592 . - . ID=exon-CLI76_11190-1;Parent=rna-CLI76_11190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_11190;product=5S ribosomal RNA ##sequence-region NSLT01000171.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000171.1 Genbank region 1 576 . + . ID=NSLT01000171.1:1..576;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000171.1 Genbank pseudogene 191 576 . - . ID=gene-CLI76_11195;Name=CLI76_11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11195;pseudo=true NSLT01000171.1 Protein Homology CDS 191 576 . - 2 ID=cds-CLI76_11195;Parent=gene-CLI76_11195;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_11195;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000172.1 1 535 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000172.1 Genbank region 1 535 . + . ID=NSLT01000172.1:1..535;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000172.1 Genbank pseudogene 125 349 . - . ID=gene-CLI76_11200;Name=CLI76_11200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11200;pseudo=true NSLT01000172.1 Protein Homology CDS 125 349 . - 0 ID=cds-CLI76_11200;Parent=gene-CLI76_11200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874655.1;locus_tag=CLI76_11200;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000172.1 Genbank gene 346 535 . - . ID=gene-CLI76_11205;Name=CLI76_11205;end_range=535,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11205;partial=true NSLT01000172.1 Protein Homology CDS 346 535 . - 1 ID=cds-PDP76211.1;Parent=gene-CLI76_11205;Dbxref=NCBI_GP:PDP76211.1;Name=PDP76211.1;end_range=535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816540.1;locus_tag=CLI76_11205;partial=true;product=conjugal transfer protein TraF;protein_id=PDP76211.1;transl_table=11 ##sequence-region NSLT01000173.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000173.1 Genbank region 1 527 . + . ID=NSLT01000173.1:1..527;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000173.1 Genbank gene 1 527 . - . ID=gene-CLI76_11210;Name=CLI76_11210;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11210;partial=true;start_range=.,1 NSLT01000173.1 Protein Homology CDS 1 527 . - 2 ID=cds-PDP76210.1;Parent=gene-CLI76_11210;Dbxref=NCBI_GP:PDP76210.1;Name=PDP76210.1;end_range=527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI76_11210;partial=true;product=relaxase;protein_id=PDP76210.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000174.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000174.1 Genbank region 1 527 . + . ID=NSLT01000174.1:1..527;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000174.1 Genbank gene 1 527 . - . ID=gene-CLI76_11215;Name=CLI76_11215;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11215;partial=true;start_range=.,1 NSLT01000174.1 Protein Homology CDS 1 527 . - 2 ID=cds-PDP76209.1;Parent=gene-CLI76_11215;Dbxref=NCBI_GP:PDP76209.1;Name=PDP76209.1;end_range=527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI76_11215;partial=true;product=relaxase;protein_id=PDP76209.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000175.1 1 522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000175.1 Genbank region 1 522 . + . ID=NSLT01000175.1:1..522;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000175.1 Genbank gene 1 522 . - . ID=gene-CLI76_11220;Name=CLI76_11220;end_range=522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11220;partial=true;start_range=.,1 NSLT01000175.1 Protein Homology CDS 1 522 . - 1 ID=cds-PDP76208.1;Parent=gene-CLI76_11220;Dbxref=NCBI_GP:PDP76208.1;Name=PDP76208.1;end_range=522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_11220;partial=true;product=peptidase C25;protein_id=PDP76208.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000176.1 1 476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000176.1 Genbank region 1 476 . + . ID=NSLT01000176.1:1..476;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000176.1 Genbank gene 1 476 . - . ID=gene-CLI76_11225;Name=CLI76_11225;end_range=476,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11225;partial=true;start_range=.,1 NSLT01000176.1 Protein Homology CDS 1 476 . - 2 ID=cds-PDP76207.1;Parent=gene-CLI76_11225;Dbxref=NCBI_GP:PDP76207.1;Name=PDP76207.1;end_range=476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004362983.1;locus_tag=CLI76_11225;partial=true;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP76207.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000177.1 1 493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000177.1 Genbank region 1 493 . + . ID=NSLT01000177.1:1..493;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000177.1 Genbank gene 71 466 . + . ID=gene-CLI76_11230;Name=CLI76_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11230 NSLT01000177.1 Protein Homology CDS 71 466 . + 0 ID=cds-PDP76206.1;Parent=gene-CLI76_11230;Dbxref=NCBI_GP:PDP76206.1;Name=PDP76206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007480394.1;locus_tag=CLI76_11230;product=molecular chaperone Tir;protein_id=PDP76206.1;transl_table=11 ##sequence-region NSLT01000178.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000178.1 Genbank region 1 479 . + . ID=NSLT01000178.1:1..479;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000178.1 Genbank gene 1 293 . + . ID=gene-CLI76_11235;Name=CLI76_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11235;partial=true;start_range=.,1 NSLT01000178.1 GeneMarkS+ CDS 1 293 . + 2 ID=cds-PDP76205.1;Parent=gene-CLI76_11235;Dbxref=NCBI_GP:PDP76205.1;Name=PDP76205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_11235;partial=true;product=hypothetical protein;protein_id=PDP76205.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000179.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000179.1 Genbank region 1 464 . + . ID=NSLT01000179.1:1..464;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000179.1 Genbank pseudogene 1 464 . - . ID=gene-CLI76_11240;Name=CLI76_11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11240;pseudo=true NSLT01000179.1 Protein Homology CDS 1 464 . - 0 ID=cds-CLI76_11240;Parent=gene-CLI76_11240;Note=frameshifted%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11240;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000017.1 1 45502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000017.1 Genbank region 1 45502 . + . ID=NSLT01000017.1:1..45502;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000017.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_04515;Name=CLI76_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04515;pseudo=true NSLT01000017.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_04515;Parent=gene-CLI76_04515;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_04515;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000017.1 Genbank gene 673 1173 . + . ID=gene-CLI76_04520;Name=CLI76_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04520 NSLT01000017.1 Protein Homology CDS 673 1173 . + 0 ID=cds-PDP77356.1;Parent=gene-CLI76_04520;Dbxref=NCBI_GP:PDP77356.1;Name=PDP77356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583858.1;locus_tag=CLI76_04520;product=sigma-70 family RNA polymerase sigma factor;protein_id=PDP77356.1;transl_table=11 NSLT01000017.1 Genbank gene 1170 1658 . + . ID=gene-CLI76_04525;Name=CLI76_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04525 NSLT01000017.1 Protein Homology CDS 1170 1658 . + 0 ID=cds-PDP77357.1;Parent=gene-CLI76_04525;Dbxref=NCBI_GP:PDP77357.1;Name=PDP77357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583859.1;locus_tag=CLI76_04525;product=hypothetical protein;protein_id=PDP77357.1;transl_table=11 NSLT01000017.1 Genbank gene 1714 2166 . + . ID=gene-CLI76_04530;Name=CLI76_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04530 NSLT01000017.1 Protein Homology CDS 1714 2166 . + 0 ID=cds-PDP77396.1;Parent=gene-CLI76_04530;Dbxref=NCBI_GP:PDP77396.1;Name=PDP77396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874251.1;locus_tag=CLI76_04530;product=hypothetical protein;protein_id=PDP77396.1;transl_table=11 NSLT01000017.1 Genbank gene 2200 3093 . + . ID=gene-CLI76_04535;Name=CLI76_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04535 NSLT01000017.1 Protein Homology CDS 2200 3093 . + 0 ID=cds-PDP77358.1;Parent=gene-CLI76_04535;Dbxref=NCBI_GP:PDP77358.1;Name=PDP77358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955954.1;locus_tag=CLI76_04535;product=hypothetical protein;protein_id=PDP77358.1;transl_table=11 NSLT01000017.1 Genbank gene 3107 3964 . + . ID=gene-CLI76_04540;Name=CLI76_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04540 NSLT01000017.1 Protein Homology CDS 3107 3964 . + 0 ID=cds-PDP77359.1;Parent=gene-CLI76_04540;Dbxref=NCBI_GP:PDP77359.1;Name=PDP77359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965083.1;locus_tag=CLI76_04540;product=hypothetical protein;protein_id=PDP77359.1;transl_table=11 NSLT01000017.1 Genbank gene 4092 4529 . - . ID=gene-CLI76_04545;Name=CLI76_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04545 NSLT01000017.1 GeneMarkS+ CDS 4092 4529 . - 0 ID=cds-PDP77360.1;Parent=gene-CLI76_04545;Dbxref=NCBI_GP:PDP77360.1;Name=PDP77360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_04545;product=hypothetical protein;protein_id=PDP77360.1;transl_table=11 NSLT01000017.1 Genbank gene 4547 4888 . - . ID=gene-CLI76_04550;Name=CLI76_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04550 NSLT01000017.1 Protein Homology CDS 4547 4888 . - 0 ID=cds-PDP77361.1;Parent=gene-CLI76_04550;Dbxref=NCBI_GP:PDP77361.1;Name=PDP77361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708950.1;locus_tag=CLI76_04550;product=hypothetical protein;protein_id=PDP77361.1;transl_table=11 NSLT01000017.1 Genbank gene 5257 5724 . - . ID=gene-CLI76_04555;Name=CLI76_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04555 NSLT01000017.1 Protein Homology CDS 5257 5724 . - 0 ID=cds-PDP77362.1;Parent=gene-CLI76_04555;Dbxref=NCBI_GP:PDP77362.1;Name=PDP77362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583867.1;locus_tag=CLI76_04555;product=histidinol phosphate aminotransferase;protein_id=PDP77362.1;transl_table=11 NSLT01000017.1 Genbank gene 6070 6336 . - . ID=gene-CLI76_04560;Name=CLI76_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04560 NSLT01000017.1 Protein Homology CDS 6070 6336 . - 0 ID=cds-PDP77363.1;Parent=gene-CLI76_04560;Dbxref=NCBI_GP:PDP77363.1;Name=PDP77363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874264.1;locus_tag=CLI76_04560;product=hypothetical protein;protein_id=PDP77363.1;transl_table=11 NSLT01000017.1 Genbank gene 6342 6833 . - . ID=gene-CLI76_04565;Name=CLI76_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04565 NSLT01000017.1 Protein Homology CDS 6342 6833 . - 0 ID=cds-PDP77364.1;Parent=gene-CLI76_04565;Dbxref=NCBI_GP:PDP77364.1;Name=PDP77364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874253.1;locus_tag=CLI76_04565;product=DNA polymerase III subunit epsilon;protein_id=PDP77364.1;transl_table=11 NSLT01000017.1 Genbank gene 6837 7475 . - . ID=gene-CLI76_04570;Name=CLI76_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04570 NSLT01000017.1 Protein Homology CDS 6837 7475 . - 0 ID=cds-PDP77365.1;Parent=gene-CLI76_04570;Dbxref=NCBI_GP:PDP77365.1;Name=PDP77365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965079.1;locus_tag=CLI76_04570;product=MarC family protein;protein_id=PDP77365.1;transl_table=11 NSLT01000017.1 Genbank gene 7657 10350 . - . ID=gene-CLI76_04575;Name=CLI76_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04575 NSLT01000017.1 Protein Homology CDS 7657 10350 . - 0 ID=cds-PDP77366.1;Parent=gene-CLI76_04575;Dbxref=NCBI_GP:PDP77366.1;Name=PDP77366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583871.1;locus_tag=CLI76_04575;product=transglutaminase;protein_id=PDP77366.1;transl_table=11 NSLT01000017.1 Genbank gene 10412 11797 . - . ID=gene-CLI76_04580;Name=CLI76_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04580 NSLT01000017.1 Protein Homology CDS 10412 11797 . - 0 ID=cds-PDP77367.1;Parent=gene-CLI76_04580;Dbxref=NCBI_GP:PDP77367.1;Name=PDP77367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457433.1;locus_tag=CLI76_04580;product=DNA repair protein RadA;protein_id=PDP77367.1;transl_table=11 NSLT01000017.1 Genbank gene 11845 12771 . - . ID=gene-CLI76_04585;Name=CLI76_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04585 NSLT01000017.1 Protein Homology CDS 11845 12771 . - 0 ID=cds-PDP77368.1;Parent=gene-CLI76_04585;Dbxref=NCBI_GP:PDP77368.1;Name=PDP77368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815460.1;locus_tag=CLI76_04585;product=amidinotransferase;protein_id=PDP77368.1;transl_table=11 NSLT01000017.1 Genbank gene 12743 13147 . + . ID=gene-CLI76_04590;Name=CLI76_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04590 NSLT01000017.1 Protein Homology CDS 12743 13147 . + 0 ID=cds-PDP77369.1;Parent=gene-CLI76_04590;Dbxref=NCBI_GP:PDP77369.1;Name=PDP77369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873523.1;locus_tag=CLI76_04590;product=hypothetical protein;protein_id=PDP77369.1;transl_table=11 NSLT01000017.1 Genbank gene 13250 13912 . + . ID=gene-CLI76_04595;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CLI76_04595 NSLT01000017.1 Protein Homology CDS 13250 13912 . + 0 ID=cds-PDP77370.1;Parent=gene-CLI76_04595;Dbxref=NCBI_GP:PDP77370.1;Name=PDP77370.1;gbkey=CDS;gene=fsa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965075.1;locus_tag=CLI76_04595;product=transaldolase;protein_id=PDP77370.1;transl_table=11 NSLT01000017.1 Genbank gene 13909 15207 . + . ID=gene-CLI76_04600;Name=CLI76_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04600 NSLT01000017.1 Protein Homology CDS 13909 15207 . + 0 ID=cds-PDP77371.1;Parent=gene-CLI76_04600;Dbxref=NCBI_GP:PDP77371.1;Name=PDP77371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457435.1;locus_tag=CLI76_04600;product=hypothetical protein;protein_id=PDP77371.1;transl_table=11 NSLT01000017.1 Genbank gene 15286 17751 . - . ID=gene-CLI76_04605;Name=CLI76_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04605 NSLT01000017.1 Protein Homology CDS 15286 17751 . - 0 ID=cds-PDP77372.1;Parent=gene-CLI76_04605;Dbxref=NCBI_GP:PDP77372.1;Name=PDP77372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873522.1;locus_tag=CLI76_04605;product=zinc carboxypeptidase;protein_id=PDP77372.1;transl_table=11 NSLT01000017.1 Genbank gene 18654 19277 . - . ID=gene-CLI76_04610;Name=CLI76_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04610 NSLT01000017.1 Protein Homology CDS 18654 19277 . - 0 ID=cds-PDP77373.1;Parent=gene-CLI76_04610;Dbxref=NCBI_GP:PDP77373.1;Name=PDP77373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583881.1;locus_tag=CLI76_04610;product=hypothetical protein;protein_id=PDP77373.1;transl_table=11 NSLT01000017.1 Genbank gene 19494 21095 . + . ID=gene-CLI76_04615;Name=CLI76_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04615 NSLT01000017.1 Protein Homology CDS 19494 21095 . + 0 ID=cds-PDP77374.1;Parent=gene-CLI76_04615;Dbxref=NCBI_GP:PDP77374.1;Name=PDP77374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874888.1;locus_tag=CLI76_04615;product=peptidase S41;protein_id=PDP77374.1;transl_table=11 NSLT01000017.1 Genbank gene 21167 22687 . + . ID=gene-CLI76_04620;Name=CLI76_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04620 NSLT01000017.1 Protein Homology CDS 21167 22687 . + 0 ID=cds-PDP77375.1;Parent=gene-CLI76_04620;Dbxref=NCBI_GP:PDP77375.1;Name=PDP77375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457440.1;locus_tag=CLI76_04620;product=hypothetical protein;protein_id=PDP77375.1;transl_table=11 NSLT01000017.1 Genbank gene 22721 23389 . + . ID=gene-CLI76_04625;Name=CLI76_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04625 NSLT01000017.1 Protein Homology CDS 22721 23389 . + 0 ID=cds-PDP77376.1;Parent=gene-CLI76_04625;Dbxref=NCBI_GP:PDP77376.1;Name=PDP77376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457441.1;locus_tag=CLI76_04625;product=uracil-DNA glycosylase;protein_id=PDP77376.1;transl_table=11 NSLT01000017.1 Genbank gene 24202 25017 . - . ID=gene-CLI76_04630;Name=CLI76_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04630 NSLT01000017.1 Protein Homology CDS 24202 25017 . - 0 ID=cds-PDP77377.1;Parent=gene-CLI76_04630;Dbxref=NCBI_GP:PDP77377.1;Name=PDP77377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815472.1;locus_tag=CLI76_04630;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=PDP77377.1;transl_table=11 NSLT01000017.1 Genbank gene 25167 26021 . - . ID=gene-CLI76_04635;Name=CLI76_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04635 NSLT01000017.1 Protein Homology CDS 25167 26021 . - 0 ID=cds-PDP77378.1;Parent=gene-CLI76_04635;Dbxref=NCBI_GP:PDP77378.1;Name=PDP77378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966047.1;locus_tag=CLI76_04635;product=hypothetical protein;protein_id=PDP77378.1;transl_table=11 NSLT01000017.1 Genbank gene 26066 26767 . - . ID=gene-CLI76_04640;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CLI76_04640 NSLT01000017.1 Protein Homology CDS 26066 26767 . - 0 ID=cds-PDP77379.1;Parent=gene-CLI76_04640;Dbxref=NCBI_GP:PDP77379.1;Name=PDP77379.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874163.1;locus_tag=CLI76_04640;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=PDP77379.1;transl_table=11 NSLT01000017.1 Genbank gene 26783 27259 . - . ID=gene-CLI76_04645;Name=CLI76_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04645 NSLT01000017.1 Protein Homology CDS 26783 27259 . - 0 ID=cds-PDP77380.1;Parent=gene-CLI76_04645;Dbxref=NCBI_GP:PDP77380.1;Name=PDP77380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583892.1;locus_tag=CLI76_04645;product=hypothetical protein;protein_id=PDP77380.1;transl_table=11 NSLT01000017.1 Genbank gene 27316 27582 . + . ID=gene-CLI76_04650;Name=CLI76_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04650 NSLT01000017.1 GeneMarkS+ CDS 27316 27582 . + 0 ID=cds-PDP77381.1;Parent=gene-CLI76_04650;Dbxref=NCBI_GP:PDP77381.1;Name=PDP77381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_04650;product=hypothetical protein;protein_id=PDP77381.1;transl_table=11 NSLT01000017.1 Genbank gene 27579 28691 . - . ID=gene-CLI76_04655;Name=CLI76_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04655 NSLT01000017.1 Protein Homology CDS 27579 28691 . - 0 ID=cds-PDP77382.1;Parent=gene-CLI76_04655;Dbxref=NCBI_GP:PDP77382.1;Name=PDP77382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966050.1;locus_tag=CLI76_04655;product=universal stress protein;protein_id=PDP77382.1;transl_table=11 NSLT01000017.1 Genbank gene 28856 29110 . - . ID=gene-CLI76_04660;Name=CLI76_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04660 NSLT01000017.1 Protein Homology CDS 28856 29110 . - 0 ID=cds-PDP77383.1;Parent=gene-CLI76_04660;Dbxref=NCBI_GP:PDP77383.1;Name=PDP77383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583895.1;locus_tag=CLI76_04660;product=DNA-binding protein;protein_id=PDP77383.1;transl_table=11 NSLT01000017.1 Genbank gene 29318 29650 . - . ID=gene-CLI76_04665;Name=CLI76_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04665 NSLT01000017.1 Protein Homology CDS 29318 29650 . - 0 ID=cds-PDP77384.1;Parent=gene-CLI76_04665;Dbxref=NCBI_GP:PDP77384.1;Name=PDP77384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966051.1;locus_tag=CLI76_04665;product=translation initiation factor;protein_id=PDP77384.1;transl_table=11 NSLT01000017.1 Genbank gene 29747 31606 . - . ID=gene-CLI76_04670;Name=CLI76_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04670 NSLT01000017.1 Protein Homology CDS 29747 31606 . - 0 ID=cds-PDP77385.1;Parent=gene-CLI76_04670;Dbxref=NCBI_GP:PDP77385.1;Name=PDP77385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815474.1;locus_tag=CLI76_04670;product=oxaloacetate decarboxylase;protein_id=PDP77385.1;transl_table=11 NSLT01000017.1 Genbank pseudogene 32016 32221 . - . ID=gene-CLI76_04675;Name=CLI76_04675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04675;pseudo=true NSLT01000017.1 Protein Homology CDS 32016 32221 . - 0 ID=cds-CLI76_04675;Parent=gene-CLI76_04675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815523.1;locus_tag=CLI76_04675;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000017.1 Genbank gene 32465 32923 . + . ID=gene-CLI76_04680;Name=CLI76_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04680 NSLT01000017.1 Protein Homology CDS 32465 32923 . + 0 ID=cds-PDP77386.1;Parent=gene-CLI76_04680;Dbxref=NCBI_GP:PDP77386.1;Name=PDP77386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874179.1;locus_tag=CLI76_04680;product=ribosome assembly cofactor RimP;protein_id=PDP77386.1;transl_table=11 NSLT01000017.1 Genbank gene 32970 34304 . + . ID=gene-CLI76_04685;Name=CLI76_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04685 NSLT01000017.1 Protein Homology CDS 32970 34304 . + 0 ID=cds-PDP77387.1;Parent=gene-CLI76_04685;Dbxref=NCBI_GP:PDP77387.1;Name=PDP77387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583902.1;locus_tag=CLI76_04685;product=transcription termination/antitermination protein NusA;protein_id=PDP77387.1;transl_table=11 NSLT01000017.1 Genbank gene 34400 37339 . + . ID=gene-CLI76_04690;Name=CLI76_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04690 NSLT01000017.1 Protein Homology CDS 34400 37339 . + 0 ID=cds-PDP77388.1;Parent=gene-CLI76_04690;Dbxref=NCBI_GP:PDP77388.1;Name=PDP77388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457447.1;locus_tag=CLI76_04690;product=translation initiation factor IF-2;protein_id=PDP77388.1;transl_table=11 NSLT01000017.1 Genbank gene 37367 37858 . + . ID=gene-CLI76_04695;Name=CLI76_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04695 NSLT01000017.1 Protein Homology CDS 37367 37858 . + 0 ID=cds-PDP77389.1;Parent=gene-CLI76_04695;Dbxref=NCBI_GP:PDP77389.1;Name=PDP77389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964797.1;locus_tag=CLI76_04695;product=colicin V production CvpA;protein_id=PDP77389.1;transl_table=11 NSLT01000017.1 Genbank gene 37892 39337 . + . ID=gene-CLI76_04700;Name=CLI76_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04700 NSLT01000017.1 Protein Homology CDS 37892 39337 . + 0 ID=cds-PDP77390.1;Parent=gene-CLI76_04700;Dbxref=NCBI_GP:PDP77390.1;Name=PDP77390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005468047.1;locus_tag=CLI76_04700;product=Fe-S cluster assembly protein SufB;protein_id=PDP77390.1;transl_table=11 NSLT01000017.1 Genbank gene 39377 40129 . + . ID=gene-CLI76_04705;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CLI76_04705 NSLT01000017.1 Protein Homology CDS 39377 40129 . + 0 ID=cds-PDP77391.1;Parent=gene-CLI76_04705;Dbxref=NCBI_GP:PDP77391.1;Name=PDP77391.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812319.1;locus_tag=CLI76_04705;product=Fe-S cluster assembly ATPase SufC;protein_id=PDP77391.1;transl_table=11 NSLT01000017.1 Genbank gene 40136 41479 . + . ID=gene-CLI76_04710;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CLI76_04710 NSLT01000017.1 Protein Homology CDS 40136 41479 . + 0 ID=cds-PDP77392.1;Parent=gene-CLI76_04710;Dbxref=NCBI_GP:PDP77392.1;Name=PDP77392.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964799.1;locus_tag=CLI76_04710;product=Fe-S cluster assembly protein SufD;protein_id=PDP77392.1;transl_table=11 NSLT01000017.1 Genbank gene 42444 43736 . + . ID=gene-CLI76_04715;Name=CLI76_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04715 NSLT01000017.1 Protein Homology CDS 42444 43736 . + 0 ID=cds-PDP77393.1;Parent=gene-CLI76_04715;Dbxref=NCBI_GP:PDP77393.1;Name=PDP77393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008778966.1;locus_tag=CLI76_04715;product=tyrosine--tRNA ligase;protein_id=PDP77393.1;transl_table=11 NSLT01000017.1 Genbank gene 43756 44823 . + . ID=gene-CLI76_04720;Name=CLI76_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04720 NSLT01000017.1 Protein Homology CDS 43756 44823 . + 0 ID=cds-PDP77394.1;Parent=gene-CLI76_04720;Dbxref=NCBI_GP:PDP77394.1;Name=PDP77394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815486.1;locus_tag=CLI76_04720;product=glycosyltransferase family 2 protein;protein_id=PDP77394.1;transl_table=11 NSLT01000017.1 Genbank gene 45170 45373 . - . ID=gene-CLI76_04725;Name=CLI76_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04725 NSLT01000017.1 Protein Homology CDS 45170 45373 . - 0 ID=cds-PDP77395.1;Parent=gene-CLI76_04725;Dbxref=NCBI_GP:PDP77395.1;Name=PDP77395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816478.1;locus_tag=CLI76_04725;product=hypothetical protein;protein_id=PDP77395.1;transl_table=11 ##sequence-region NSLT01000180.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000180.1 Genbank region 1 462 . + . ID=NSLT01000180.1:1..462;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000180.1 Genbank pseudogene 2 462 . + . ID=gene-CLI76_11245;Name=CLI76_11245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11245;pseudo=true NSLT01000180.1 Protein Homology CDS 2 462 . + 0 ID=cds-CLI76_11245;Parent=gene-CLI76_11245;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11245;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000181.1 1 462 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000181.1 Genbank region 1 462 . + . ID=NSLT01000181.1:1..462;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000181.1 Genbank gene 1 462 . - . ID=gene-CLI76_11250;Name=CLI76_11250;end_range=462,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11250;partial=true;start_range=.,1 NSLT01000181.1 Protein Homology CDS 1 462 . - 1 ID=cds-PDP76204.1;Parent=gene-CLI76_11250;Dbxref=NCBI_GP:PDP76204.1;Name=PDP76204.1;end_range=462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11250;partial=true;product=IS3 family transposase;protein_id=PDP76204.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000182.1 1 451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000182.1 Genbank region 1 451 . + . ID=NSLT01000182.1:1..451;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000182.1 Genbank pseudogene 13 329 . + . ID=gene-CLI76_11255;Name=CLI76_11255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11255;pseudo=true NSLT01000182.1 Protein Homology CDS 13 329 . + 0 ID=cds-CLI76_11255;Parent=gene-CLI76_11255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815367.1;locus_tag=CLI76_11255;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000183.1 1 430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000183.1 Genbank region 1 430 . + . ID=NSLT01000183.1:1..430;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000183.1 Genbank pseudogene 9 430 . - . ID=gene-CLI76_11260;Name=CLI76_11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11260;pseudo=true NSLT01000183.1 Protein Homology CDS 9 430 . - 2 ID=cds-CLI76_11260;Parent=gene-CLI76_11260;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874656.1;locus_tag=CLI76_11260;product=glycerol dehydrogenase;pseudo=true;transl_table=11 ##sequence-region NSLT01000184.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000184.1 Genbank region 1 411 . + . ID=NSLT01000184.1:1..411;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000184.1 Genbank gene 1 135 . + . ID=gene-CLI76_11265;Name=CLI76_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11265;partial=true;start_range=.,1 NSLT01000184.1 Protein Homology CDS 1 135 . + 0 ID=cds-PDP76202.1;Parent=gene-CLI76_11265;Dbxref=NCBI_GP:PDP76202.1;Name=PDP76202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009291849.1;locus_tag=CLI76_11265;partial=true;product=conjugal transfer protein;protein_id=PDP76202.1;start_range=.,1;transl_table=11 NSLT01000184.1 Genbank gene 139 411 . + . ID=gene-CLI76_11270;Name=CLI76_11270;end_range=411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11270;partial=true NSLT01000184.1 Protein Homology CDS 139 411 . + 0 ID=cds-PDP76203.1;Parent=gene-CLI76_11270;Dbxref=NCBI_GP:PDP76203.1;Name=PDP76203.1;end_range=411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816540.1;locus_tag=CLI76_11270;partial=true;product=conjugal transfer protein TraF;protein_id=PDP76203.1;transl_table=11 ##sequence-region NSLT01000185.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000185.1 Genbank region 1 338 . + . ID=NSLT01000185.1:1..338;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000185.1 Genbank gene 1 338 . - . ID=gene-CLI76_11275;Name=CLI76_11275;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11275;partial=true;start_range=.,1 NSLT01000185.1 Protein Homology CDS 1 338 . - 0 ID=cds-PDP76201.1;Parent=gene-CLI76_11275;Dbxref=NCBI_GP:PDP76201.1;Name=PDP76201.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_11275;partial=true;product=hypothetical protein;protein_id=PDP76201.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000186.1 1 333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000186.1 Genbank region 1 333 . + . ID=NSLT01000186.1:1..333;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000186.1 Genbank gene 1 333 . + . ID=gene-CLI76_11280;Name=CLI76_11280;end_range=333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11280;partial=true;start_range=.,1 NSLT01000186.1 Protein Homology CDS 1 333 . + 1 ID=cds-PDP76200.1;Parent=gene-CLI76_11280;Dbxref=NCBI_GP:PDP76200.1;Name=PDP76200.1;end_range=333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11280;partial=true;product=IS3 family transposase;protein_id=PDP76200.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000187.1 1 329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000187.1 Genbank region 1 329 . + . ID=NSLT01000187.1:1..329;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000187.1 Genbank gene 1 329 . - . ID=gene-CLI76_11285;Name=CLI76_11285;end_range=329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11285;partial=true;start_range=.,1 NSLT01000187.1 Protein Homology CDS 1 329 . - 0 ID=cds-PDP76199.1;Parent=gene-CLI76_11285;Dbxref=NCBI_GP:PDP76199.1;Name=PDP76199.1;end_range=329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_11285;partial=true;product=hemagglutinin;protein_id=PDP76199.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000188.1 1 283 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000188.1 Genbank region 1 283 . + . ID=NSLT01000188.1:1..283;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000188.1 Genbank gene 1 283 . + . ID=gene-CLI76_11290;Name=CLI76_11290;end_range=283,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11290;partial=true;start_range=.,1 NSLT01000188.1 Protein Homology CDS 1 283 . + 2 ID=cds-PDP76198.1;Parent=gene-CLI76_11290;Dbxref=NCBI_GP:PDP76198.1;Name=PDP76198.1;end_range=283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_11290;partial=true;product=hypothetical protein;protein_id=PDP76198.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000189.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000189.1 Genbank region 1 255 . + . ID=NSLT01000189.1:1..255;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000189.1 Genbank gene 1 255 . - . ID=gene-CLI76_11295;Name=CLI76_11295;end_range=255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11295;partial=true;start_range=.,1 NSLT01000189.1 Protein Homology CDS 1 255 . - 2 ID=cds-PDP76197.1;Parent=gene-CLI76_11295;Dbxref=NCBI_GP:PDP76197.1;Name=PDP76197.1;end_range=255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_11295;partial=true;product=hemagglutinin;protein_id=PDP76197.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000018.1 1 42066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000018.1 Genbank region 1 42066 . + . ID=NSLT01000018.1:1..42066;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000018.1 Genbank gene 53 1351 . + . ID=gene-CLI76_04730;Name=CLI76_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04730 NSLT01000018.1 Protein Homology CDS 53 1351 . + 0 ID=cds-PDP77319.1;Parent=gene-CLI76_04730;Dbxref=NCBI_GP:PDP77319.1;Name=PDP77319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584454.1;locus_tag=CLI76_04730;product=DNA mismatch repair protein MutS;protein_id=PDP77319.1;transl_table=11 NSLT01000018.1 Genbank gene 1379 2950 . + . ID=gene-CLI76_04735;Name=CLI76_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04735 NSLT01000018.1 Protein Homology CDS 1379 2950 . + 0 ID=cds-PDP77320.1;Parent=gene-CLI76_04735;Dbxref=NCBI_GP:PDP77320.1;Name=PDP77320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013760116.1;locus_tag=CLI76_04735;product=D-lysine 5%2C6-aminomutase subunit alpha;protein_id=PDP77320.1;transl_table=11 NSLT01000018.1 Genbank gene 2947 3738 . + . ID=gene-CLI76_04740;Name=CLI76_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04740 NSLT01000018.1 Protein Homology CDS 2947 3738 . + 0 ID=cds-PDP77321.1;Parent=gene-CLI76_04740;Dbxref=NCBI_GP:PDP77321.1;Name=PDP77321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458078.1;locus_tag=CLI76_04740;product=hypothetical protein;protein_id=PDP77321.1;transl_table=11 NSLT01000018.1 Genbank gene 3761 4423 . + . ID=gene-CLI76_04745;Name=CLI76_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04745 NSLT01000018.1 Protein Homology CDS 3761 4423 . + 0 ID=cds-PDP77322.1;Parent=gene-CLI76_04745;Dbxref=NCBI_GP:PDP77322.1;Name=PDP77322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360058.1;locus_tag=CLI76_04745;product=CoA transferase subunit B;protein_id=PDP77322.1;transl_table=11 NSLT01000018.1 Genbank gene 4469 5608 . + . ID=gene-CLI76_04750;Name=CLI76_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04750 NSLT01000018.1 Protein Homology CDS 4469 5608 . + 0 ID=cds-PDP77323.1;Parent=gene-CLI76_04750;Dbxref=NCBI_GP:PDP77323.1;Name=PDP77323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360059.1;locus_tag=CLI76_04750;product=acyl-CoA dehydrogenase;protein_id=PDP77323.1;transl_table=11 NSLT01000018.1 Genbank gene 5623 6408 . + . ID=gene-CLI76_04755;Name=CLI76_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04755 NSLT01000018.1 Protein Homology CDS 5623 6408 . + 0 ID=cds-PDP77324.1;Parent=gene-CLI76_04755;Dbxref=NCBI_GP:PDP77324.1;Name=PDP77324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364458.1;locus_tag=CLI76_04755;product=electron transfer flavoprotein subunit beta;protein_id=PDP77324.1;transl_table=11 NSLT01000018.1 Genbank gene 6422 7429 . + . ID=gene-CLI76_04760;Name=CLI76_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04760 NSLT01000018.1 Protein Homology CDS 6422 7429 . + 0 ID=cds-PDP77325.1;Parent=gene-CLI76_04760;Dbxref=NCBI_GP:PDP77325.1;Name=PDP77325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964623.1;locus_tag=CLI76_04760;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=PDP77325.1;transl_table=11 NSLT01000018.1 Genbank gene 7533 8303 . + . ID=gene-CLI76_04765;Name=CLI76_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04765 NSLT01000018.1 Protein Homology CDS 7533 8303 . + 0 ID=cds-PDP77326.1;Parent=gene-CLI76_04765;Dbxref=NCBI_GP:PDP77326.1;Name=PDP77326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013613329.1;locus_tag=CLI76_04765;product=enoyl-CoA hydratase;protein_id=PDP77326.1;transl_table=11 NSLT01000018.1 Genbank gene 8350 9195 . + . ID=gene-CLI76_04770;Name=CLI76_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04770 NSLT01000018.1 Protein Homology CDS 8350 9195 . + 0 ID=cds-PDP77327.1;Parent=gene-CLI76_04770;Dbxref=NCBI_GP:PDP77327.1;Name=PDP77327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873698.1;locus_tag=CLI76_04770;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=PDP77327.1;transl_table=11 NSLT01000018.1 Genbank gene 9365 10561 . - . ID=gene-CLI76_04775;Name=CLI76_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04775 NSLT01000018.1 Protein Homology CDS 9365 10561 . - 0 ID=cds-PDP77328.1;Parent=gene-CLI76_04775;Dbxref=NCBI_GP:PDP77328.1;Name=PDP77328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458083.1;locus_tag=CLI76_04775;product=acetate kinase;protein_id=PDP77328.1;transl_table=11 NSLT01000018.1 Genbank gene 10607 11617 . - . ID=gene-CLI76_04780;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CLI76_04780 NSLT01000018.1 Protein Homology CDS 10607 11617 . - 0 ID=cds-PDP77329.1;Parent=gene-CLI76_04780;Dbxref=NCBI_GP:PDP77329.1;Name=PDP77329.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964889.1;locus_tag=CLI76_04780;product=phosphate acetyltransferase;protein_id=PDP77329.1;transl_table=11 NSLT01000018.1 Genbank gene 11828 12676 . - . ID=gene-CLI76_04785;Name=CLI76_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04785 NSLT01000018.1 Protein Homology CDS 11828 12676 . - 0 ID=cds-PDP77330.1;Parent=gene-CLI76_04785;Dbxref=NCBI_GP:PDP77330.1;Name=PDP77330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584442.1;locus_tag=CLI76_04785;product=DUF3108 domain-containing protein;protein_id=PDP77330.1;transl_table=11 NSLT01000018.1 Genbank gene 12817 13920 . - . ID=gene-CLI76_04790;Name=CLI76_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04790 NSLT01000018.1 Protein Homology CDS 12817 13920 . - 0 ID=cds-PDP77331.1;Parent=gene-CLI76_04790;Dbxref=NCBI_GP:PDP77331.1;Name=PDP77331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873697.1;locus_tag=CLI76_04790;product=thioredoxin;protein_id=PDP77331.1;transl_table=11 NSLT01000018.1 Genbank gene 14188 14436 . + . ID=gene-CLI76_04795;Name=CLI76_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04795 NSLT01000018.1 Protein Homology CDS 14188 14436 . + 0 ID=cds-PDP77332.1;Parent=gene-CLI76_04795;Dbxref=NCBI_GP:PDP77332.1;Name=PDP77332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964892.1;locus_tag=CLI76_04795;product=hypothetical protein;protein_id=PDP77332.1;transl_table=11 NSLT01000018.1 Genbank gene 14790 15725 . + . ID=gene-CLI76_04800;Name=CLI76_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04800 NSLT01000018.1 Protein Homology CDS 14790 15725 . + 0 ID=cds-PDP77333.1;Parent=gene-CLI76_04800;Dbxref=NCBI_GP:PDP77333.1;Name=PDP77333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873665.1;locus_tag=CLI76_04800;product=TIGR01212 family radical SAM protein;protein_id=PDP77333.1;transl_table=11 NSLT01000018.1 Genbank gene 15777 16340 . - . ID=gene-CLI76_04805;Name=CLI76_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04805 NSLT01000018.1 Protein Homology CDS 15777 16340 . - 0 ID=cds-PDP77334.1;Parent=gene-CLI76_04805;Dbxref=NCBI_GP:PDP77334.1;Name=PDP77334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584438.1;locus_tag=CLI76_04805;product=N-acetyltransferase;protein_id=PDP77334.1;transl_table=11 NSLT01000018.1 Genbank gene 16457 17194 . - . ID=gene-CLI76_04810;Name=CLI76_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04810 NSLT01000018.1 Protein Homology CDS 16457 17194 . - 0 ID=cds-PDP77335.1;Parent=gene-CLI76_04810;Dbxref=NCBI_GP:PDP77335.1;Name=PDP77335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584437.1;locus_tag=CLI76_04810;product=DNA-binding response regulator;protein_id=PDP77335.1;transl_table=11 NSLT01000018.1 Genbank gene 17763 17999 . + . ID=gene-CLI76_04815;Name=CLI76_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04815 NSLT01000018.1 Protein Homology CDS 17763 17999 . + 0 ID=cds-PDP77336.1;Parent=gene-CLI76_04815;Dbxref=NCBI_GP:PDP77336.1;Name=PDP77336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584436.1;locus_tag=CLI76_04815;product=hypothetical protein;protein_id=PDP77336.1;transl_table=11 NSLT01000018.1 Genbank gene 17953 18996 . + . ID=gene-CLI76_04820;Name=CLI76_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04820 NSLT01000018.1 Protein Homology CDS 17953 18996 . + 0 ID=cds-PDP77337.1;Parent=gene-CLI76_04820;Dbxref=NCBI_GP:PDP77337.1;Name=PDP77337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815908.1;locus_tag=CLI76_04820;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=PDP77337.1;transl_table=11 NSLT01000018.1 Genbank gene 19087 19683 . + . ID=gene-CLI76_04825;Name=CLI76_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04825 NSLT01000018.1 Protein Homology CDS 19087 19683 . + 0 ID=cds-PDP77338.1;Parent=gene-CLI76_04825;Dbxref=NCBI_GP:PDP77338.1;Name=PDP77338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964366.1;locus_tag=CLI76_04825;product=DUF4827 domain-containing protein;protein_id=PDP77338.1;transl_table=11 NSLT01000018.1 Genbank gene 19737 21125 . + . ID=gene-CLI76_04830;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CLI76_04830 NSLT01000018.1 Protein Homology CDS 19737 21125 . + 0 ID=cds-PDP77339.1;Parent=gene-CLI76_04830;Dbxref=NCBI_GP:PDP77339.1;Name=PDP77339.1;gbkey=CDS;gene=glmM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815906.1;locus_tag=CLI76_04830;product=phosphoglucosamine mutase;protein_id=PDP77339.1;transl_table=11 NSLT01000018.1 Genbank gene 21170 22606 . + . ID=gene-CLI76_04835;Name=CLI76_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04835 NSLT01000018.1 Protein Homology CDS 21170 22606 . + 0 ID=cds-PDP77340.1;Parent=gene-CLI76_04835;Dbxref=NCBI_GP:PDP77340.1;Name=PDP77340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458090.1;locus_tag=CLI76_04835;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=PDP77340.1;transl_table=11 NSLT01000018.1 Genbank gene 22922 23908 . + . ID=gene-CLI76_04840;Name=CLI76_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04840 NSLT01000018.1 Protein Homology CDS 22922 23908 . + 0 ID=cds-PDP77341.1;Parent=gene-CLI76_04840;Dbxref=NCBI_GP:PDP77341.1;Name=PDP77341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873632.1;locus_tag=CLI76_04840;product=GSCFA family protein;protein_id=PDP77341.1;transl_table=11 NSLT01000018.1 Genbank gene 23944 26415 . + . ID=gene-CLI76_04845;Name=CLI76_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04845 NSLT01000018.1 Protein Homology CDS 23944 26415 . + 0 ID=cds-PDP77342.1;Parent=gene-CLI76_04845;Dbxref=NCBI_GP:PDP77342.1;Name=PDP77342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458093.1;locus_tag=CLI76_04845;product=bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase;protein_id=PDP77342.1;transl_table=11 NSLT01000018.1 Genbank gene 26723 27946 . - . ID=gene-CLI76_04850;Name=CLI76_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04850 NSLT01000018.1 Protein Homology CDS 26723 27946 . - 0 ID=cds-PDP77343.1;Parent=gene-CLI76_04850;Dbxref=NCBI_GP:PDP77343.1;Name=PDP77343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584428.1;locus_tag=CLI76_04850;product=hypothetical protein;protein_id=PDP77343.1;transl_table=11 NSLT01000018.1 Genbank gene 28005 28078 . - . ID=gene-CLI76_04855;Name=CLI76_04855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_04855 NSLT01000018.1 tRNAscan-SE tRNA 28005 28078 . - . ID=rna-CLI76_04855;Parent=gene-CLI76_04855;anticodon=(pos:complement(28042..28044));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04855;product=tRNA-Arg NSLT01000018.1 tRNAscan-SE exon 28005 28078 . - . ID=exon-CLI76_04855-1;Parent=rna-CLI76_04855;anticodon=(pos:complement(28042..28044));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04855;product=tRNA-Arg NSLT01000018.1 Genbank gene 28114 28187 . - . ID=gene-CLI76_04860;Name=CLI76_04860;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_04860 NSLT01000018.1 tRNAscan-SE tRNA 28114 28187 . - . ID=rna-CLI76_04860;Parent=gene-CLI76_04860;anticodon=(pos:complement(28151..28153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04860;product=tRNA-Arg NSLT01000018.1 tRNAscan-SE exon 28114 28187 . - . ID=exon-CLI76_04860-1;Parent=rna-CLI76_04860;anticodon=(pos:complement(28151..28153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_04860;product=tRNA-Arg NSLT01000018.1 Genbank gene 28282 29106 . - . ID=gene-CLI76_04865;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CLI76_04865 NSLT01000018.1 Protein Homology CDS 28282 29106 . - 0 ID=cds-PDP77344.1;Parent=gene-CLI76_04865;Dbxref=NCBI_GP:PDP77344.1;Name=PDP77344.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815900.1;locus_tag=CLI76_04865;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=PDP77344.1;transl_table=11 NSLT01000018.1 Genbank gene 29099 29950 . - . ID=gene-CLI76_04870;Name=CLI76_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04870 NSLT01000018.1 Protein Homology CDS 29099 29950 . - 0 ID=cds-PDP77345.1;Parent=gene-CLI76_04870;Dbxref=NCBI_GP:PDP77345.1;Name=PDP77345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815899.1;locus_tag=CLI76_04870;product=ATPase;protein_id=PDP77345.1;transl_table=11 NSLT01000018.1 Genbank gene 29947 31407 . - . ID=gene-CLI76_04875;Name=CLI76_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04875 NSLT01000018.1 Protein Homology CDS 29947 31407 . - 0 ID=cds-PDP77346.1;Parent=gene-CLI76_04875;Dbxref=NCBI_GP:PDP77346.1;Name=PDP77346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815898.1;locus_tag=CLI76_04875;product=sodium:solute symporter;protein_id=PDP77346.1;transl_table=11 NSLT01000018.1 Genbank gene 31734 32192 . + . ID=gene-CLI76_04880;Name=CLI76_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04880 NSLT01000018.1 Protein Homology CDS 31734 32192 . + 0 ID=cds-PDP77347.1;Parent=gene-CLI76_04880;Dbxref=NCBI_GP:PDP77347.1;Name=PDP77347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584424.1;locus_tag=CLI76_04880;product=histidinol phosphate phosphatase;protein_id=PDP77347.1;transl_table=11 NSLT01000018.1 Genbank gene 32261 33580 . + . ID=gene-CLI76_04885;Name=CLI76_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04885 NSLT01000018.1 Protein Homology CDS 32261 33580 . + 0 ID=cds-PDP77348.1;Parent=gene-CLI76_04885;Dbxref=NCBI_GP:PDP77348.1;Name=PDP77348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815897.1;locus_tag=CLI76_04885;product=AAA family ATPase;protein_id=PDP77348.1;transl_table=11 NSLT01000018.1 Genbank gene 33606 34373 . + . ID=gene-CLI76_04890;Name=CLI76_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04890 NSLT01000018.1 Protein Homology CDS 33606 34373 . + 0 ID=cds-PDP77349.1;Parent=gene-CLI76_04890;Dbxref=NCBI_GP:PDP77349.1;Name=PDP77349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873692.1;locus_tag=CLI76_04890;product=tRNA (adenosine(37)-N6)-methyltransferase TrmM;protein_id=PDP77349.1;transl_table=11 NSLT01000018.1 Genbank gene 34337 35794 . - . ID=gene-CLI76_04895;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CLI76_04895 NSLT01000018.1 Protein Homology CDS 34337 35794 . - 0 ID=cds-PDP77350.1;Parent=gene-CLI76_04895;Dbxref=NCBI_GP:PDP77350.1;Name=PDP77350.1;gbkey=CDS;gene=rpoN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458100.1;locus_tag=CLI76_04895;product=RNA polymerase sigma-54 factor;protein_id=PDP77350.1;transl_table=11 NSLT01000018.1 Genbank gene 35788 37092 . - . ID=gene-CLI76_04900;Name=CLI76_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04900 NSLT01000018.1 Protein Homology CDS 35788 37092 . - 0 ID=cds-PDP77355.1;Parent=gene-CLI76_04900;Dbxref=NCBI_GP:PDP77355.1;Name=PDP77355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873680.1;locus_tag=CLI76_04900;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=PDP77355.1;transl_table=11 NSLT01000018.1 Genbank gene 37302 37658 . + . ID=gene-CLI76_04905;Name=CLI76_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04905 NSLT01000018.1 Protein Homology CDS 37302 37658 . + 0 ID=cds-PDP77351.1;Parent=gene-CLI76_04905;Dbxref=NCBI_GP:PDP77351.1;Name=PDP77351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956218.1;locus_tag=CLI76_04905;product=aspartate 1-decarboxylase;protein_id=PDP77351.1;transl_table=11 NSLT01000018.1 Genbank gene 37735 39072 . + . ID=gene-CLI76_04910;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CLI76_04910 NSLT01000018.1 Protein Homology CDS 37735 39072 . + 0 ID=cds-PDP77352.1;Parent=gene-CLI76_04910;Dbxref=NCBI_GP:PDP77352.1;Name=PDP77352.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005652735.1;locus_tag=CLI76_04910;product=signal recognition particle protein;protein_id=PDP77352.1;transl_table=11 NSLT01000018.1 Genbank gene 39193 40083 . + . ID=gene-CLI76_04915;Name=CLI76_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04915 NSLT01000018.1 Protein Homology CDS 39193 40083 . + 0 ID=cds-PDP77353.1;Parent=gene-CLI76_04915;Dbxref=NCBI_GP:PDP77353.1;Name=PDP77353.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584417.1;locus_tag=CLI76_04915;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=PDP77353.1;transl_table=11 NSLT01000018.1 Genbank gene 40376 41722 . + . ID=gene-CLI76_04920;Name=CLI76_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04920 NSLT01000018.1 Protein Homology CDS 40376 41722 . + 0 ID=cds-PDP77354.1;Parent=gene-CLI76_04920;Dbxref=NCBI_GP:PDP77354.1;Name=PDP77354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584416.1;locus_tag=CLI76_04920;product=MATE family efflux transporter;protein_id=PDP77354.1;transl_table=11 ##sequence-region NSLT01000190.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000190.1 Genbank region 1 255 . + . ID=NSLT01000190.1:1..255;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000190.1 Genbank gene 1 255 . - . ID=gene-CLI76_11300;Name=CLI76_11300;end_range=255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11300;partial=true;start_range=.,1 NSLT01000190.1 Protein Homology CDS 1 255 . - 2 ID=cds-PDP76196.1;Parent=gene-CLI76_11300;Dbxref=NCBI_GP:PDP76196.1;Name=PDP76196.1;end_range=255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_11300;partial=true;product=hemagglutinin;protein_id=PDP76196.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000191.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000191.1 Genbank region 1 254 . + . ID=NSLT01000191.1:1..254;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 ##sequence-region NSLT01000192.1 1 253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000192.1 Genbank region 1 253 . + . ID=NSLT01000192.1:1..253;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000192.1 Genbank gene 1 176 . - . ID=gene-CLI76_11305;Name=CLI76_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_11305;partial=true;start_range=.,1 NSLT01000192.1 Protein Homology CDS 1 176 . - 0 ID=cds-PDP76195.1;Parent=gene-CLI76_11305;Dbxref=NCBI_GP:PDP76195.1;Name=PDP76195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_11305;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76195.1;start_range=.,1;transl_table=11 ##sequence-region NSLT01000193.1 1 251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000193.1 Genbank region 1 251 . + . ID=NSLT01000193.1:1..251;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000193.1 Genbank pseudogene 1 165 . + . ID=gene-CLI76_11310;Name=CLI76_11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11310;pseudo=true NSLT01000193.1 Protein Homology CDS 1 165 . + 0 ID=cds-CLI76_11310;Parent=gene-CLI76_11310;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11310;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000194.1 1 250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000194.1 Genbank region 1 250 . + . ID=NSLT01000194.1:1..250;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000194.1 Genbank pseudogene 11 130 . - . ID=gene-CLI76_11315;Name=CLI76_11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11315;pseudo=true NSLT01000194.1 Protein Homology CDS 11 130 . - 0 ID=cds-CLI76_11315;Parent=gene-CLI76_11315;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_11315;product=transposase;pseudo=true;transl_table=11 NSLT01000194.1 Genbank pseudogene 120 218 . + . ID=gene-CLI76_11320;Name=CLI76_11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_11320;pseudo=true NSLT01000194.1 Protein Homology CDS 120 218 . + 0 ID=cds-CLI76_11320;Parent=gene-CLI76_11320;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_11320;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000195.1 1 217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000195.1 Genbank region 1 217 . + . ID=NSLT01000195.1:1..217;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 ##sequence-region NSLT01000196.1 1 215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000196.1 Genbank region 1 215 . + . ID=NSLT01000196.1:1..215;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 ##sequence-region NSLT01000019.1 1 41099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000019.1 Genbank region 1 41099 . + . ID=NSLT01000019.1:1..41099;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000019.1 Genbank gene 459 1661 . - . ID=gene-CLI76_04925;Name=CLI76_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04925 NSLT01000019.1 Protein Homology CDS 459 1661 . - 0 ID=cds-PDP77290.1;Parent=gene-CLI76_04925;Dbxref=NCBI_GP:PDP77290.1;Name=PDP77290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965545.1;locus_tag=CLI76_04925;product=hypothetical protein;protein_id=PDP77290.1;transl_table=11 NSLT01000019.1 Genbank gene 1695 4274 . - . ID=gene-CLI76_04930;Name=CLI76_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04930 NSLT01000019.1 Protein Homology CDS 1695 4274 . - 0 ID=cds-PDP77291.1;Parent=gene-CLI76_04930;Dbxref=NCBI_GP:PDP77291.1;Name=PDP77291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585460.1;locus_tag=CLI76_04930;product=DNA gyrase subunit A;protein_id=PDP77291.1;transl_table=11 NSLT01000019.1 Genbank gene 4458 5384 . - . ID=gene-CLI76_04935;Name=CLI76_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04935 NSLT01000019.1 Protein Homology CDS 4458 5384 . - 0 ID=cds-PDP77292.1;Parent=gene-CLI76_04935;Dbxref=NCBI_GP:PDP77292.1;Name=PDP77292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965543.1;locus_tag=CLI76_04935;product=hypothetical protein;protein_id=PDP77292.1;transl_table=11 NSLT01000019.1 Genbank gene 5421 6131 . - . ID=gene-CLI76_04940;Name=CLI76_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04940 NSLT01000019.1 Protein Homology CDS 5421 6131 . - 0 ID=cds-PDP77293.1;Parent=gene-CLI76_04940;Dbxref=NCBI_GP:PDP77293.1;Name=PDP77293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457842.1;locus_tag=CLI76_04940;product=DUF3256 domain-containing protein;protein_id=PDP77293.1;transl_table=11 NSLT01000019.1 Genbank gene 6196 6654 . - . ID=gene-CLI76_04945;Name=CLI76_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04945 NSLT01000019.1 Protein Homology CDS 6196 6654 . - 0 ID=cds-PDP77294.1;Parent=gene-CLI76_04945;Dbxref=NCBI_GP:PDP77294.1;Name=PDP77294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816610.1;locus_tag=CLI76_04945;product=histidinol phosphate aminotransferase;protein_id=PDP77294.1;transl_table=11 NSLT01000019.1 Genbank gene 7207 8418 . + . ID=gene-CLI76_04950;Name=CLI76_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04950 NSLT01000019.1 Protein Homology CDS 7207 8418 . + 0 ID=cds-PDP77295.1;Parent=gene-CLI76_04950;Dbxref=NCBI_GP:PDP77295.1;Name=PDP77295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873527.1;locus_tag=CLI76_04950;product=hypothetical protein;protein_id=PDP77295.1;transl_table=11 NSLT01000019.1 Genbank gene 8446 9903 . - . ID=gene-CLI76_04955;Name=CLI76_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04955 NSLT01000019.1 Protein Homology CDS 8446 9903 . - 0 ID=cds-PDP77296.1;Parent=gene-CLI76_04955;Dbxref=NCBI_GP:PDP77296.1;Name=PDP77296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457839.1;locus_tag=CLI76_04955;product=rod shape-determining protein RodA;protein_id=PDP77296.1;transl_table=11 NSLT01000019.1 Genbank gene 9893 11758 . - . ID=gene-CLI76_04960;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CLI76_04960 NSLT01000019.1 Protein Homology CDS 9893 11758 . - 0 ID=cds-PDP77297.1;Parent=gene-CLI76_04960;Dbxref=NCBI_GP:PDP77297.1;Name=PDP77297.1;gbkey=CDS;gene=mrdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965538.1;locus_tag=CLI76_04960;product=penicillin-binding protein 2;protein_id=PDP77297.1;transl_table=11 NSLT01000019.1 Genbank gene 11751 12269 . - . ID=gene-CLI76_04965;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CLI76_04965 NSLT01000019.1 Protein Homology CDS 11751 12269 . - 0 ID=cds-PDP77298.1;Parent=gene-CLI76_04965;Dbxref=NCBI_GP:PDP77298.1;Name=PDP77298.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965537.1;locus_tag=CLI76_04965;product=rod shape-determining protein MreD;protein_id=PDP77298.1;transl_table=11 NSLT01000019.1 Genbank gene 12269 13156 . - . ID=gene-CLI76_04970;Name=CLI76_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04970 NSLT01000019.1 Protein Homology CDS 12269 13156 . - 0 ID=cds-PDP77299.1;Parent=gene-CLI76_04970;Dbxref=NCBI_GP:PDP77299.1;Name=PDP77299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965536.1;locus_tag=CLI76_04970;product=rod shape-determining protein MreC;protein_id=PDP77299.1;transl_table=11 NSLT01000019.1 Genbank gene 13194 14213 . - . ID=gene-CLI76_04975;Name=CLI76_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04975 NSLT01000019.1 Protein Homology CDS 13194 14213 . - 0 ID=cds-PDP77300.1;Parent=gene-CLI76_04975;Dbxref=NCBI_GP:PDP77300.1;Name=PDP77300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585450.1;locus_tag=CLI76_04975;product=rod shape-determining protein;protein_id=PDP77300.1;transl_table=11 NSLT01000019.1 Genbank gene 14316 15842 . - . ID=gene-CLI76_04980;Name=CLI76_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04980 NSLT01000019.1 Protein Homology CDS 14316 15842 . - 0 ID=cds-PDP77301.1;Parent=gene-CLI76_04980;Dbxref=NCBI_GP:PDP77301.1;Name=PDP77301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585449.1;locus_tag=CLI76_04980;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=PDP77301.1;transl_table=11 NSLT01000019.1 Genbank pseudogene 16105 16418 . + . ID=gene-CLI76_04985;Name=CLI76_04985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04985;pseudo=true NSLT01000019.1 Protein Homology CDS 16105 16418 . + 0 ID=cds-CLI76_04985;Parent=gene-CLI76_04985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI76_04985;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000019.1 Genbank gene 16858 17085 . + . ID=gene-CLI76_04990;Name=CLI76_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_04990 NSLT01000019.1 Protein Homology CDS 16858 17085 . + 0 ID=cds-PDP77302.1;Parent=gene-CLI76_04990;Dbxref=NCBI_GP:PDP77302.1;Name=PDP77302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816600.1;locus_tag=CLI76_04990;product=DUF1661 domain-containing protein;protein_id=PDP77302.1;transl_table=11 NSLT01000019.1 Genbank pseudogene 17078 17314 . + . ID=gene-CLI76_04995;Name=CLI76_04995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_04995;pseudo=true NSLT01000019.1 Protein Homology CDS 17078 17314 . + 0 ID=cds-CLI76_04995;Parent=gene-CLI76_04995;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226350.1;locus_tag=CLI76_04995;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLT01000019.1 Genbank gene 17570 18949 . - . ID=gene-CLI76_05000;Name=CLI76_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05000 NSLT01000019.1 Protein Homology CDS 17570 18949 . - 0 ID=cds-PDP77303.1;Parent=gene-CLI76_05000;Dbxref=NCBI_GP:PDP77303.1;Name=PDP77303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013612047.1;locus_tag=CLI76_05000;product=tyrosine phenol-lyase;protein_id=PDP77303.1;transl_table=11 NSLT01000019.1 Genbank gene 19202 20347 . - . ID=gene-CLI76_05005;Name=CLI76_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05005 NSLT01000019.1 Protein Homology CDS 19202 20347 . - 0 ID=cds-PDP77304.1;Parent=gene-CLI76_05005;Dbxref=NCBI_GP:PDP77304.1;Name=PDP77304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585447.1;locus_tag=CLI76_05005;product=AP endonuclease;protein_id=PDP77304.1;transl_table=11 NSLT01000019.1 Genbank gene 20344 21258 . - . ID=gene-CLI76_05010;Name=CLI76_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05010 NSLT01000019.1 Protein Homology CDS 20344 21258 . - 0 ID=cds-PDP77305.1;Parent=gene-CLI76_05010;Dbxref=NCBI_GP:PDP77305.1;Name=PDP77305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585446.1;locus_tag=CLI76_05010;product=rhomboid family intramembrane serine protease;protein_id=PDP77305.1;transl_table=11 NSLT01000019.1 Genbank gene 21242 21964 . - . ID=gene-CLI76_05015;Name=CLI76_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05015 NSLT01000019.1 Protein Homology CDS 21242 21964 . - 0 ID=cds-PDP77306.1;Parent=gene-CLI76_05015;Dbxref=NCBI_GP:PDP77306.1;Name=PDP77306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585445.1;locus_tag=CLI76_05015;product=DUF1751 domain-containing protein;protein_id=PDP77306.1;transl_table=11 NSLT01000019.1 Genbank gene 21991 24846 . - . ID=gene-CLI76_05020;Name=CLI76_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05020 NSLT01000019.1 Protein Homology CDS 21991 24846 . - 0 ID=cds-PDP77307.1;Parent=gene-CLI76_05020;Dbxref=NCBI_GP:PDP77307.1;Name=PDP77307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457851.1;locus_tag=CLI76_05020;product=kinase;protein_id=PDP77307.1;transl_table=11 NSLT01000019.1 Genbank pseudogene 25025 25223 . + . ID=gene-CLI76_05025;Name=CLI76_05025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05025;pseudo=true NSLT01000019.1 Protein Homology CDS 25025 25223 . + 0 ID=cds-CLI76_05025;Parent=gene-CLI76_05025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874208.1;locus_tag=CLI76_05025;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000019.1 Genbank gene 25297 25833 . - . ID=gene-CLI76_05030;Name=CLI76_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05030 NSLT01000019.1 Protein Homology CDS 25297 25833 . - 0 ID=cds-PDP77318.1;Parent=gene-CLI76_05030;Dbxref=NCBI_GP:PDP77318.1;Name=PDP77318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956306.1;locus_tag=CLI76_05030;product=5-nitroimidazole antibiotic resistance protein;protein_id=PDP77318.1;transl_table=11 NSLT01000019.1 Genbank gene 26096 27061 . + . ID=gene-CLI76_05035;Name=CLI76_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05035 NSLT01000019.1 Protein Homology CDS 26096 27061 . + 0 ID=cds-PDP77308.1;Parent=gene-CLI76_05035;Dbxref=NCBI_GP:PDP77308.1;Name=PDP77308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873381.1;locus_tag=CLI76_05035;product=cation transporter;protein_id=PDP77308.1;transl_table=11 NSLT01000019.1 Genbank gene 27058 27450 . - . ID=gene-CLI76_05040;Name=CLI76_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05040 NSLT01000019.1 Protein Homology CDS 27058 27450 . - 0 ID=cds-PDP77309.1;Parent=gene-CLI76_05040;Dbxref=NCBI_GP:PDP77309.1;Name=PDP77309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457854.1;locus_tag=CLI76_05040;product=hypothetical protein;protein_id=PDP77309.1;transl_table=11 NSLT01000019.1 Genbank gene 27666 29351 . - . ID=gene-CLI76_05045;Name=CLI76_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05045 NSLT01000019.1 Protein Homology CDS 27666 29351 . - 0 ID=cds-PDP77310.1;Parent=gene-CLI76_05045;Dbxref=NCBI_GP:PDP77310.1;Name=PDP77310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873387.1;locus_tag=CLI76_05045;product=transporter;protein_id=PDP77310.1;transl_table=11 NSLT01000019.1 cmsearch riboswitch 29871 30084 . - . ID=id-NSLT01000019.1:29871..30084;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000019.1 Genbank gene 30251 30508 . + . ID=gene-CLI76_05050;Name=CLI76_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05050 NSLT01000019.1 GeneMarkS+ CDS 30251 30508 . + 0 ID=cds-PDP77311.1;Parent=gene-CLI76_05050;Dbxref=NCBI_GP:PDP77311.1;Name=PDP77311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_05050;product=hypothetical protein;protein_id=PDP77311.1;transl_table=11 NSLT01000019.1 Genbank gene 31265 33868 . + . ID=gene-CLI76_05055;Name=CLI76_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05055 NSLT01000019.1 Protein Homology CDS 31265 33868 . + 0 ID=cds-PDP77312.1;Parent=gene-CLI76_05055;Dbxref=NCBI_GP:PDP77312.1;Name=PDP77312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457856.1;locus_tag=CLI76_05055;product=TonB-dependent receptor;protein_id=PDP77312.1;transl_table=11 NSLT01000019.1 Genbank gene 34305 35246 . + . ID=gene-CLI76_05060;Name=CLI76_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05060 NSLT01000019.1 Protein Homology CDS 34305 35246 . + 0 ID=cds-PDP77313.1;Parent=gene-CLI76_05060;Dbxref=NCBI_GP:PDP77313.1;Name=PDP77313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816585.1;locus_tag=CLI76_05060;product=nitronate monooxygenase;protein_id=PDP77313.1;transl_table=11 NSLT01000019.1 Genbank gene 35243 35473 . + . ID=gene-CLI76_05065;Name=CLI76_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05065 NSLT01000019.1 Protein Homology CDS 35243 35473 . + 0 ID=cds-PDP77314.1;Parent=gene-CLI76_05065;Dbxref=NCBI_GP:PDP77314.1;Name=PDP77314.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14375.4;locus_tag=CLI76_05065;product=hypothetical protein;protein_id=PDP77314.1;transl_table=11 NSLT01000019.1 Genbank gene 35542 37188 . + . ID=gene-CLI76_05070;Name=CLI76_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05070 NSLT01000019.1 Protein Homology CDS 35542 37188 . + 0 ID=cds-PDP77315.1;Parent=gene-CLI76_05070;Dbxref=NCBI_GP:PDP77315.1;Name=PDP77315.1;Note=catalyzes the formation of malate from fumerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873410.1;locus_tag=CLI76_05070;product=fumarate hydratase;protein_id=PDP77315.1;transl_table=11 NSLT01000019.1 Genbank gene 37310 39118 . + . ID=gene-CLI76_05075;Name=CLI76_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05075 NSLT01000019.1 Protein Homology CDS 37310 39118 . + 0 ID=cds-PDP77316.1;Parent=gene-CLI76_05075;Dbxref=NCBI_GP:PDP77316.1;Name=PDP77316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816583.1;locus_tag=CLI76_05075;product=DNA polymerase III subunit gamma/tau;protein_id=PDP77316.1;transl_table=11 NSLT01000019.1 Genbank gene 39547 40632 . + . ID=gene-CLI76_05080;Name=CLI76_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05080 NSLT01000019.1 Protein Homology CDS 39547 40632 . + 0 ID=cds-PDP77317.1;Parent=gene-CLI76_05080;Dbxref=NCBI_GP:PDP77317.1;Name=PDP77317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_05080;product=IS5/IS1182 family transposase;protein_id=PDP77317.1;transl_table=11 NSLT01000019.1 Genbank pseudogene 40775 41099 . + . ID=gene-CLI76_05085;Name=CLI76_05085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05085;pseudo=true NSLT01000019.1 Protein Homology CDS 40775 41099 . + 0 ID=cds-CLI76_05085;Parent=gene-CLI76_05085;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_05085;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000001.1 1 104183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000001.1 Genbank region 1 104183 . + . ID=NSLT01000001.1:1..104183;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000001.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_00005;Name=CLI76_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00005;pseudo=true NSLT01000001.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_00005;Parent=gene-CLI76_00005;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_00005;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000001.1 Genbank gene 911 1096 . - . ID=gene-CLI76_00010;Name=CLI76_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00010 NSLT01000001.1 Protein Homology CDS 911 1096 . - 0 ID=cds-PDP78134.1;Parent=gene-CLI76_00010;Dbxref=NCBI_GP:PDP78134.1;Name=PDP78134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584835.1;locus_tag=CLI76_00010;product=hypothetical protein;protein_id=PDP78134.1;transl_table=11 NSLT01000001.1 Genbank gene 1224 2207 . + . ID=gene-CLI76_00015;Name=CLI76_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00015 NSLT01000001.1 Protein Homology CDS 1224 2207 . + 0 ID=cds-PDP78135.1;Parent=gene-CLI76_00015;Dbxref=NCBI_GP:PDP78135.1;Name=PDP78135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458401.1;locus_tag=CLI76_00015;product=hypothetical protein;protein_id=PDP78135.1;transl_table=11 NSLT01000001.1 Genbank gene 2236 2973 . + . ID=gene-CLI76_00020;Name=CLI76_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00020 NSLT01000001.1 Protein Homology CDS 2236 2973 . + 0 ID=cds-PDP78136.1;Parent=gene-CLI76_00020;Dbxref=NCBI_GP:PDP78136.1;Name=PDP78136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816166.1;locus_tag=CLI76_00020;product=SIMPL domain-containing protein;protein_id=PDP78136.1;transl_table=11 NSLT01000001.1 Genbank gene 3024 3938 . + . ID=gene-CLI76_00025;Name=CLI76_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00025 NSLT01000001.1 Protein Homology CDS 3024 3938 . + 0 ID=cds-PDP78137.1;Parent=gene-CLI76_00025;Dbxref=NCBI_GP:PDP78137.1;Name=PDP78137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964295.1;locus_tag=CLI76_00025;product=aspartate carbamoyltransferase;protein_id=PDP78137.1;transl_table=11 NSLT01000001.1 Genbank gene 3951 4406 . + . ID=gene-CLI76_00030;Name=CLI76_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00030 NSLT01000001.1 Protein Homology CDS 3951 4406 . + 0 ID=cds-PDP78138.1;Parent=gene-CLI76_00030;Dbxref=NCBI_GP:PDP78138.1;Name=PDP78138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964296.1;locus_tag=CLI76_00030;product=aspartate carbamoyltransferase regulatory subunit;protein_id=PDP78138.1;transl_table=11 NSLT01000001.1 Genbank gene 4435 5022 . + . ID=gene-CLI76_00035;Name=CLI76_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00035 NSLT01000001.1 Protein Homology CDS 4435 5022 . + 0 ID=cds-PDP78139.1;Parent=gene-CLI76_00035;Dbxref=NCBI_GP:PDP78139.1;Name=PDP78139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458398.1;locus_tag=CLI76_00035;product=flavin reductase family protein;protein_id=PDP78139.1;transl_table=11 NSLT01000001.1 Genbank gene 5060 5656 . + . ID=gene-CLI76_00040;Name=CLI76_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00040 NSLT01000001.1 Protein Homology CDS 5060 5656 . + 0 ID=cds-PDP78140.1;Parent=gene-CLI76_00040;Dbxref=NCBI_GP:PDP78140.1;Name=PDP78140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584889.1;locus_tag=CLI76_00040;product=LemA family protein;protein_id=PDP78140.1;transl_table=11 NSLT01000001.1 Genbank gene 5837 6985 . + . ID=gene-CLI76_00045;Name=CLI76_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00045 NSLT01000001.1 Protein Homology CDS 5837 6985 . + 0 ID=cds-PDP78217.1;Parent=gene-CLI76_00045;Dbxref=NCBI_GP:PDP78217.1;Name=PDP78217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584890.1;locus_tag=CLI76_00045;product=hypothetical protein;protein_id=PDP78217.1;transl_table=11 NSLT01000001.1 Genbank gene 6993 9053 . + . ID=gene-CLI76_00050;Name=CLI76_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00050 NSLT01000001.1 Protein Homology CDS 6993 9053 . + 0 ID=cds-PDP78218.1;Parent=gene-CLI76_00050;Dbxref=NCBI_GP:PDP78218.1;Name=PDP78218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964300.1;locus_tag=CLI76_00050;product=hypothetical protein;protein_id=PDP78218.1;transl_table=11 NSLT01000001.1 Genbank gene 9054 9881 . + . ID=gene-CLI76_00055;Name=CLI76_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00055 NSLT01000001.1 Protein Homology CDS 9054 9881 . + 0 ID=cds-PDP78141.1;Parent=gene-CLI76_00055;Dbxref=NCBI_GP:PDP78141.1;Name=PDP78141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458395.1;locus_tag=CLI76_00055;product=glutamine ABC transporter;protein_id=PDP78141.1;transl_table=11 NSLT01000001.1 Genbank gene 9944 11149 . - . ID=gene-CLI76_00060;Name=CLI76_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00060 NSLT01000001.1 Protein Homology CDS 9944 11149 . - 0 ID=cds-PDP78142.1;Parent=gene-CLI76_00060;Dbxref=NCBI_GP:PDP78142.1;Name=PDP78142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816172.1;locus_tag=CLI76_00060;product=class I SAM-dependent rRNA methyltransferase;protein_id=PDP78142.1;transl_table=11 NSLT01000001.1 Genbank gene 11146 11748 . - . ID=gene-CLI76_00065;Name=CLI76_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00065 NSLT01000001.1 Protein Homology CDS 11146 11748 . - 0 ID=cds-PDP78143.1;Parent=gene-CLI76_00065;Dbxref=NCBI_GP:PDP78143.1;Name=PDP78143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964303.1;locus_tag=CLI76_00065;product=3'-5' exonuclease domain-containing protein 2;protein_id=PDP78143.1;transl_table=11 NSLT01000001.1 Genbank gene 11789 12349 . - . ID=gene-CLI76_00070;Name=CLI76_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00070 NSLT01000001.1 Protein Homology CDS 11789 12349 . - 0 ID=cds-PDP78144.1;Parent=gene-CLI76_00070;Dbxref=NCBI_GP:PDP78144.1;Name=PDP78144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458393.1;locus_tag=CLI76_00070;product=DUF5063 domain-containing protein;protein_id=PDP78144.1;transl_table=11 NSLT01000001.1 Genbank gene 12828 14762 . + . ID=gene-CLI76_00075;Name=CLI76_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00075 NSLT01000001.1 Protein Homology CDS 12828 14762 . + 0 ID=cds-PDP78145.1;Parent=gene-CLI76_00075;Dbxref=NCBI_GP:PDP78145.1;Name=PDP78145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873796.1;locus_tag=CLI76_00075;product=type IIA DNA topoisomerase subunit B;protein_id=PDP78145.1;transl_table=11 NSLT01000001.1 Genbank gene 14793 15254 . + . ID=gene-CLI76_00080;Name=CLI76_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00080 NSLT01000001.1 Protein Homology CDS 14793 15254 . + 0 ID=cds-PDP78146.1;Parent=gene-CLI76_00080;Dbxref=NCBI_GP:PDP78146.1;Name=PDP78146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873821.1;locus_tag=CLI76_00080;product=pantetheine-phosphate adenylyltransferase;protein_id=PDP78146.1;transl_table=11 NSLT01000001.1 Genbank gene 16246 16914 . + . ID=gene-CLI76_00085;Name=CLI76_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00085 NSLT01000001.1 Protein Homology CDS 16246 16914 . + 0 ID=cds-PDP78147.1;Parent=gene-CLI76_00085;Dbxref=NCBI_GP:PDP78147.1;Name=PDP78147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816175.1;locus_tag=CLI76_00085;product=hypothetical protein;protein_id=PDP78147.1;transl_table=11 NSLT01000001.1 Genbank gene 17475 17930 . + . ID=gene-CLI76_00090;Name=CLI76_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00090 NSLT01000001.1 Protein Homology CDS 17475 17930 . + 0 ID=cds-PDP78148.1;Parent=gene-CLI76_00090;Dbxref=NCBI_GP:PDP78148.1;Name=PDP78148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_812786.1;locus_tag=CLI76_00090;product=50S ribosomal protein L13;protein_id=PDP78148.1;transl_table=11 NSLT01000001.1 Genbank gene 17940 18326 . + . ID=gene-CLI76_00095;Name=CLI76_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00095 NSLT01000001.1 Protein Homology CDS 17940 18326 . + 0 ID=cds-PDP78149.1;Parent=gene-CLI76_00095;Dbxref=NCBI_GP:PDP78149.1;Name=PDP78149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360966.1;locus_tag=CLI76_00095;product=30S ribosomal protein S9;protein_id=PDP78149.1;transl_table=11 NSLT01000001.1 Genbank gene 18461 19306 . + . ID=gene-CLI76_00100;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CLI76_00100 NSLT01000001.1 Protein Homology CDS 18461 19306 . + 0 ID=cds-PDP78150.1;Parent=gene-CLI76_00100;Dbxref=NCBI_GP:PDP78150.1;Name=PDP78150.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584904.1;locus_tag=CLI76_00100;product=30S ribosomal protein S2;protein_id=PDP78150.1;transl_table=11 NSLT01000001.1 Genbank gene 19445 20269 . + . ID=gene-CLI76_00105;Name=CLI76_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00105 NSLT01000001.1 Protein Homology CDS 19445 20269 . + 0 ID=cds-PDP78151.1;Parent=gene-CLI76_00105;Dbxref=NCBI_GP:PDP78151.1;Name=PDP78151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584905.1;locus_tag=CLI76_00105;product=elongation factor Ts;protein_id=PDP78151.1;transl_table=11 NSLT01000001.1 Genbank gene 20643 22679 . + . ID=gene-CLI76_00110;Name=CLI76_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00110 NSLT01000001.1 Protein Homology CDS 20643 22679 . + 0 ID=cds-PDP78152.1;Parent=gene-CLI76_00110;Dbxref=NCBI_GP:PDP78152.1;Name=PDP78152.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816178.1;locus_tag=CLI76_00110;product=excinuclease ABC subunit UvrB;protein_id=PDP78152.1;transl_table=11 NSLT01000001.1 Genbank gene 22676 24196 . - . ID=gene-CLI76_00115;Name=CLI76_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00115 NSLT01000001.1 Protein Homology CDS 22676 24196 . - 0 ID=cds-PDP78153.1;Parent=gene-CLI76_00115;Dbxref=NCBI_GP:PDP78153.1;Name=PDP78153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458388.1;locus_tag=CLI76_00115;product=potassium/proton antiporter;protein_id=PDP78153.1;transl_table=11 NSLT01000001.1 Genbank gene 24203 24397 . - . ID=gene-CLI76_00120;Name=CLI76_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00120 NSLT01000001.1 GeneMarkS+ CDS 24203 24397 . - 0 ID=cds-PDP78154.1;Parent=gene-CLI76_00120;Dbxref=NCBI_GP:PDP78154.1;Name=PDP78154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_00120;product=hypothetical protein;protein_id=PDP78154.1;transl_table=11 NSLT01000001.1 Genbank gene 24674 25993 . + . ID=gene-CLI76_00125;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CLI76_00125 NSLT01000001.1 Protein Homology CDS 24674 25993 . + 0 ID=cds-PDP78155.1;Parent=gene-CLI76_00125;Dbxref=NCBI_GP:PDP78155.1;Name=PDP78155.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816181.1;locus_tag=CLI76_00125;product=RIP metalloprotease RseP;protein_id=PDP78155.1;transl_table=11 NSLT01000001.1 Genbank gene 26003 28525 . + . ID=gene-CLI76_00130;Name=CLI76_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00130 NSLT01000001.1 Protein Homology CDS 26003 28525 . + 0 ID=cds-PDP78156.1;Parent=gene-CLI76_00130;Dbxref=NCBI_GP:PDP78156.1;Name=PDP78156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873834.1;locus_tag=CLI76_00130;product=endonuclease MutS2;protein_id=PDP78156.1;transl_table=11 NSLT01000001.1 Genbank gene 28687 28878 . + . ID=gene-CLI76_00135;Name=CLI76_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00135 NSLT01000001.1 Protein Homology CDS 28687 28878 . + 0 ID=cds-PDP78157.1;Parent=gene-CLI76_00135;Dbxref=NCBI_GP:PDP78157.1;Name=PDP78157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964318.1;locus_tag=CLI76_00135;product=30S ribosomal protein S21;protein_id=PDP78157.1;transl_table=11 NSLT01000001.1 Genbank gene 28955 30160 . + . ID=gene-CLI76_00140;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CLI76_00140 NSLT01000001.1 Protein Homology CDS 28955 30160 . + 0 ID=cds-PDP78158.1;Parent=gene-CLI76_00140;Dbxref=NCBI_GP:PDP78158.1;Name=PDP78158.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816183.1;locus_tag=CLI76_00140;product=ribosomal subunit interface protein;protein_id=PDP78158.1;transl_table=11 NSLT01000001.1 Genbank gene 30300 30385 . + . ID=gene-CLI76_00145;Name=CLI76_00145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00145 NSLT01000001.1 tRNAscan-SE tRNA 30300 30385 . + . ID=rna-CLI76_00145;Parent=gene-CLI76_00145;anticodon=(pos:30334..30336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00145;product=tRNA-Tyr NSLT01000001.1 tRNAscan-SE exon 30300 30385 . + . ID=exon-CLI76_00145-1;Parent=rna-CLI76_00145;anticodon=(pos:30334..30336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00145;product=tRNA-Tyr NSLT01000001.1 Genbank gene 30415 30486 . + . ID=gene-CLI76_00150;Name=CLI76_00150;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00150 NSLT01000001.1 tRNAscan-SE tRNA 30415 30486 . + . ID=rna-CLI76_00150;Parent=gene-CLI76_00150;anticodon=(pos:30447..30449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00150;product=tRNA-Thr NSLT01000001.1 tRNAscan-SE exon 30415 30486 . + . ID=exon-CLI76_00150-1;Parent=rna-CLI76_00150;anticodon=(pos:30447..30449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00150;product=tRNA-Thr NSLT01000001.1 Genbank gene 30554 31741 . + . ID=gene-CLI76_00155;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CLI76_00155 NSLT01000001.1 Protein Homology CDS 30554 31741 . + 0 ID=cds-PDP78159.1;Parent=gene-CLI76_00155;Dbxref=NCBI_GP:PDP78159.1;Name=PDP78159.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558087.1;locus_tag=CLI76_00155;product=elongation factor Tu;protein_id=PDP78159.1;transl_table=11 NSLT01000001.1 Genbank gene 31812 31887 . + . ID=gene-CLI76_00160;Name=CLI76_00160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00160 NSLT01000001.1 tRNAscan-SE tRNA 31812 31887 . + . ID=rna-CLI76_00160;Parent=gene-CLI76_00160;anticodon=(pos:31845..31847);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00160;product=tRNA-Trp NSLT01000001.1 tRNAscan-SE exon 31812 31887 . + . ID=exon-CLI76_00160-1;Parent=rna-CLI76_00160;anticodon=(pos:31845..31847);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00160;product=tRNA-Trp NSLT01000001.1 Genbank gene 31900 32103 . + . ID=gene-CLI76_00165;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CLI76_00165 NSLT01000001.1 Protein Homology CDS 31900 32103 . + 0 ID=cds-PDP78160.1;Parent=gene-CLI76_00165;Dbxref=NCBI_GP:PDP78160.1;Name=PDP78160.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584915.1;locus_tag=CLI76_00165;product=preprotein translocase subunit SecE;protein_id=PDP78160.1;transl_table=11 NSLT01000001.1 Genbank gene 32125 32664 . + . ID=gene-CLI76_00170;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CLI76_00170 NSLT01000001.1 Protein Homology CDS 32125 32664 . + 0 ID=cds-PDP78161.1;Parent=gene-CLI76_00170;Dbxref=NCBI_GP:PDP78161.1;Name=PDP78161.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964321.1;locus_tag=CLI76_00170;product=transcription termination/antitermination factor NusG;protein_id=PDP78161.1;transl_table=11 NSLT01000001.1 Genbank gene 32733 33170 . + . ID=gene-CLI76_00175;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CLI76_00175 NSLT01000001.1 Protein Homology CDS 32733 33170 . + 0 ID=cds-PDP78162.1;Parent=gene-CLI76_00175;Dbxref=NCBI_GP:PDP78162.1;Name=PDP78162.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841944.1;locus_tag=CLI76_00175;product=50S ribosomal protein L11;protein_id=PDP78162.1;transl_table=11 NSLT01000001.1 Genbank gene 33191 33889 . + . ID=gene-CLI76_00180;Name=CLI76_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00180 NSLT01000001.1 Protein Homology CDS 33191 33889 . + 0 ID=cds-PDP78163.1;Parent=gene-CLI76_00180;Dbxref=NCBI_GP:PDP78163.1;Name=PDP78163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854218.1;locus_tag=CLI76_00180;product=50S ribosomal protein L1;protein_id=PDP78163.1;transl_table=11 NSLT01000001.1 Genbank gene 33905 34429 . + . ID=gene-CLI76_00185;Name=CLI76_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00185 NSLT01000001.1 Protein Homology CDS 33905 34429 . + 0 ID=cds-PDP78164.1;Parent=gene-CLI76_00185;Dbxref=NCBI_GP:PDP78164.1;Name=PDP78164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956000.1;locus_tag=CLI76_00185;product=50S ribosomal protein L10;protein_id=PDP78164.1;transl_table=11 NSLT01000001.1 Genbank gene 34471 34848 . + . ID=gene-CLI76_00190;Name=CLI76_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00190 NSLT01000001.1 Protein Homology CDS 34471 34848 . + 0 ID=cds-PDP78165.1;Parent=gene-CLI76_00190;Dbxref=NCBI_GP:PDP78165.1;Name=PDP78165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359876.1;locus_tag=CLI76_00190;product=50S ribosomal protein L7/L12;protein_id=PDP78165.1;transl_table=11 NSLT01000001.1 Genbank gene 34960 38769 . + . ID=gene-CLI76_00195;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CLI76_00195 NSLT01000001.1 Protein Homology CDS 34960 38769 . + 0 ID=cds-PDP78166.1;Parent=gene-CLI76_00195;Dbxref=NCBI_GP:PDP78166.1;Name=PDP78166.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101469.1;locus_tag=CLI76_00195;product=DNA-directed RNA polymerase subunit beta;protein_id=PDP78166.1;transl_table=11 NSLT01000001.1 Genbank gene 38835 43136 . + . ID=gene-CLI76_00200;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CLI76_00200 NSLT01000001.1 Protein Homology CDS 38835 43136 . + 0 ID=cds-PDP78167.1;Parent=gene-CLI76_00200;Dbxref=NCBI_GP:PDP78167.1;Name=PDP78167.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964326.1;locus_tag=CLI76_00200;product=DNA-directed RNA polymerase subunit beta';protein_id=PDP78167.1;transl_table=11 NSLT01000001.1 Genbank gene 43420 44118 . + . ID=gene-CLI76_00205;Name=CLI76_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00205 NSLT01000001.1 Protein Homology CDS 43420 44118 . + 0 ID=cds-PDP78168.1;Parent=gene-CLI76_00205;Dbxref=NCBI_GP:PDP78168.1;Name=PDP78168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873831.1;locus_tag=CLI76_00205;product=Crp/Fnr family transcriptional regulator;protein_id=PDP78168.1;transl_table=11 NSLT01000001.1 Genbank gene 44169 44459 . - . ID=gene-CLI76_00210;Name=CLI76_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00210 NSLT01000001.1 Protein Homology CDS 44169 44459 . - 0 ID=cds-PDP78169.1;Parent=gene-CLI76_00210;Dbxref=NCBI_GP:PDP78169.1;Name=PDP78169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584925.1;locus_tag=CLI76_00210;product=DUF721 domain-containing protein;protein_id=PDP78169.1;transl_table=11 NSLT01000001.1 Genbank gene 44473 45567 . - . ID=gene-CLI76_00215;Name=CLI76_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00215 NSLT01000001.1 Protein Homology CDS 44473 45567 . - 0 ID=cds-PDP78170.1;Parent=gene-CLI76_00215;Dbxref=NCBI_GP:PDP78170.1;Name=PDP78170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584926.1;locus_tag=CLI76_00215;product=DNA replication and repair protein RecF;protein_id=PDP78170.1;transl_table=11 NSLT01000001.1 Genbank gene 45564 46094 . - . ID=gene-CLI76_00220;Name=CLI76_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00220 NSLT01000001.1 Protein Homology CDS 45564 46094 . - 0 ID=cds-PDP78171.1;Parent=gene-CLI76_00220;Dbxref=NCBI_GP:PDP78171.1;Name=PDP78171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873801.1;locus_tag=CLI76_00220;product=gliding motility lipoprotein GldH;protein_id=PDP78171.1;transl_table=11 NSLT01000001.1 Genbank gene 46102 47514 . - . ID=gene-CLI76_00225;Name=CLI76_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00225 NSLT01000001.1 Protein Homology CDS 46102 47514 . - 0 ID=cds-PDP78172.1;Parent=gene-CLI76_00225;Dbxref=NCBI_GP:PDP78172.1;Name=PDP78172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816187.1;locus_tag=CLI76_00225;product=hypothetical protein;protein_id=PDP78172.1;transl_table=11 NSLT01000001.1 Genbank gene 47619 49160 . - . ID=gene-CLI76_00230;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CLI76_00230 NSLT01000001.1 Protein Homology CDS 47619 49160 . - 0 ID=cds-PDP78173.1;Parent=gene-CLI76_00230;Dbxref=NCBI_GP:PDP78173.1;Name=PDP78173.1;gbkey=CDS;gene=rny;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432587.1;locus_tag=CLI76_00230;product=ribonuclease Y;protein_id=PDP78173.1;transl_table=11 NSLT01000001.1 Genbank gene 49307 49615 . - . ID=gene-CLI76_00235;Name=CLI76_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00235 NSLT01000001.1 Protein Homology CDS 49307 49615 . - 0 ID=cds-PDP78174.1;Parent=gene-CLI76_00235;Dbxref=NCBI_GP:PDP78174.1;Name=PDP78174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584930.1;locus_tag=CLI76_00235;product=cell division protein ZapA;protein_id=PDP78174.1;transl_table=11 NSLT01000001.1 Genbank gene 49622 49918 . - . ID=gene-CLI76_00240;Name=CLI76_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00240 NSLT01000001.1 Protein Homology CDS 49622 49918 . - 0 ID=cds-PDP78175.1;Parent=gene-CLI76_00240;Dbxref=NCBI_GP:PDP78175.1;Name=PDP78175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964334.1;locus_tag=CLI76_00240;product=hypothetical protein;protein_id=PDP78175.1;transl_table=11 NSLT01000001.1 Genbank gene 50250 50924 . - . ID=gene-CLI76_00245;Name=CLI76_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00245 NSLT01000001.1 GeneMarkS+ CDS 50250 50924 . - 0 ID=cds-PDP78176.1;Parent=gene-CLI76_00245;Dbxref=NCBI_GP:PDP78176.1;Name=PDP78176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_00245;product=hypothetical protein;protein_id=PDP78176.1;transl_table=11 NSLT01000001.1 Genbank gene 50911 52197 . - . ID=gene-CLI76_00250;Name=CLI76_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00250 NSLT01000001.1 Protein Homology CDS 50911 52197 . - 0 ID=cds-PDP78177.1;Parent=gene-CLI76_00250;Dbxref=NCBI_GP:PDP78177.1;Name=PDP78177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13175.4;locus_tag=CLI76_00250;product=hypothetical protein;protein_id=PDP78177.1;transl_table=11 NSLT01000001.1 Genbank pseudogene 52859 53055 . + . ID=gene-CLI76_00255;Name=CLI76_00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00255;pseudo=true NSLT01000001.1 Protein Homology CDS 52859 53055 . + 0 ID=cds-CLI76_00255;Parent=gene-CLI76_00255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584933.1;locus_tag=CLI76_00255;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000001.1 Genbank gene 53290 53604 . + . ID=gene-CLI76_00260;Name=CLI76_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00260 NSLT01000001.1 Protein Homology CDS 53290 53604 . + 0 ID=cds-PDP78178.1;Parent=gene-CLI76_00260;Dbxref=NCBI_GP:PDP78178.1;Name=PDP78178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873807.1;locus_tag=CLI76_00260;product=hypothetical protein;protein_id=PDP78178.1;transl_table=11 NSLT01000001.1 Genbank gene 53648 54469 . + . ID=gene-CLI76_00265;Name=CLI76_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00265 NSLT01000001.1 Protein Homology CDS 53648 54469 . + 0 ID=cds-PDP78179.1;Parent=gene-CLI76_00265;Dbxref=NCBI_GP:PDP78179.1;Name=PDP78179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359903.1;locus_tag=CLI76_00265;product=hypothetical protein;protein_id=PDP78179.1;transl_table=11 NSLT01000001.1 Genbank gene 54828 57605 . + . ID=gene-CLI76_00270;Name=CLI76_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00270 NSLT01000001.1 Protein Homology CDS 54828 57605 . + 0 ID=cds-PDP78180.1;Parent=gene-CLI76_00270;Dbxref=NCBI_GP:PDP78180.1;Name=PDP78180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956006.1;locus_tag=CLI76_00270;product=hemagglutinin;protein_id=PDP78180.1;transl_table=11 NSLT01000001.1 Genbank gene 57864 59720 . - . ID=gene-CLI76_00275;Name=CLI76_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00275 NSLT01000001.1 Protein Homology CDS 57864 59720 . - 0 ID=cds-PDP78181.1;Parent=gene-CLI76_00275;Dbxref=NCBI_GP:PDP78181.1;Name=PDP78181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458371.1;locus_tag=CLI76_00275;product=DNA mismatch repair protein MutL;protein_id=PDP78181.1;transl_table=11 NSLT01000001.1 Genbank gene 59717 60061 . - . ID=gene-CLI76_00280;Name=CLI76_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00280 NSLT01000001.1 Protein Homology CDS 59717 60061 . - 0 ID=cds-PDP78182.1;Parent=gene-CLI76_00280;Dbxref=NCBI_GP:PDP78182.1;Name=PDP78182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873824.1;locus_tag=CLI76_00280;product=hypothetical protein;protein_id=PDP78182.1;transl_table=11 NSLT01000001.1 Genbank gene 60058 61932 . - . ID=gene-CLI76_00285;Name=CLI76_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00285 NSLT01000001.1 Protein Homology CDS 60058 61932 . - 0 ID=cds-PDP78183.1;Parent=gene-CLI76_00285;Dbxref=NCBI_GP:PDP78183.1;Name=PDP78183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816194.1;locus_tag=CLI76_00285;product=OstA-like protein;protein_id=PDP78183.1;transl_table=11 NSLT01000001.1 Genbank gene 61996 63363 . - . ID=gene-CLI76_00290;Name=CLI76_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00290 NSLT01000001.1 Protein Homology CDS 61996 63363 . - 0 ID=cds-PDP78219.1;Parent=gene-CLI76_00290;Dbxref=NCBI_GP:PDP78219.1;Name=PDP78219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584940.1;locus_tag=CLI76_00290;product=peptidylprolyl isomerase;protein_id=PDP78219.1;transl_table=11 NSLT01000001.1 Genbank gene 63415 65592 . - . ID=gene-CLI76_00295;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CLI76_00295 NSLT01000001.1 Protein Homology CDS 63415 65592 . - 0 ID=cds-PDP78184.1;Parent=gene-CLI76_00295;Dbxref=NCBI_GP:PDP78184.1;Name=PDP78184.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966059.1;locus_tag=CLI76_00295;product=DNA helicase RecQ;protein_id=PDP78184.1;transl_table=11 NSLT01000001.1 Genbank gene 65671 66906 . - . ID=gene-CLI76_00300;Name=CLI76_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00300 NSLT01000001.1 Protein Homology CDS 65671 66906 . - 0 ID=cds-PDP78185.1;Parent=gene-CLI76_00300;Dbxref=NCBI_GP:PDP78185.1;Name=PDP78185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816197.1;locus_tag=CLI76_00300;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=PDP78185.1;transl_table=11 NSLT01000001.1 Genbank gene 66943 67611 . - . ID=gene-CLI76_00305;Name=CLI76_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00305 NSLT01000001.1 Protein Homology CDS 66943 67611 . - 0 ID=cds-PDP78186.1;Parent=gene-CLI76_00305;Dbxref=NCBI_GP:PDP78186.1;Name=PDP78186.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859577.1;locus_tag=CLI76_00305;product=ATP-dependent Clp protease proteolytic subunit;protein_id=PDP78186.1;transl_table=11 NSLT01000001.1 Genbank gene 67984 68844 . - . ID=gene-CLI76_00310;Name=CLI76_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00310 NSLT01000001.1 Protein Homology CDS 67984 68844 . - 0 ID=cds-PDP78187.1;Parent=gene-CLI76_00310;Dbxref=NCBI_GP:PDP78187.1;Name=PDP78187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584944.1;locus_tag=CLI76_00310;product=DUF2807 domain-containing protein;protein_id=PDP78187.1;transl_table=11 NSLT01000001.1 Genbank gene 69024 69224 . + . ID=gene-CLI76_00315;Name=CLI76_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00315 NSLT01000001.1 Protein Homology CDS 69024 69224 . + 0 ID=cds-PDP78188.1;Parent=gene-CLI76_00315;Dbxref=NCBI_GP:PDP78188.1;Name=PDP78188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815526.1;locus_tag=CLI76_00315;product=hypothetical protein;protein_id=PDP78188.1;transl_table=11 NSLT01000001.1 Genbank gene 69869 71419 . - . ID=gene-CLI76_00320;Name=CLI76_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00320 NSLT01000001.1 Protein Homology CDS 69869 71419 . - 0 ID=cds-PDP78189.1;Parent=gene-CLI76_00320;Dbxref=NCBI_GP:PDP78189.1;Name=PDP78189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816654.1;locus_tag=CLI76_00320;product=L-lactate permease;protein_id=PDP78189.1;transl_table=11 NSLT01000001.1 Genbank gene 71736 72206 . + . ID=gene-CLI76_00325;Name=CLI76_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00325 NSLT01000001.1 Protein Homology CDS 71736 72206 . + 0 ID=cds-PDP78220.1;Parent=gene-CLI76_00325;Dbxref=NCBI_GP:PDP78220.1;Name=PDP78220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816653.1;locus_tag=CLI76_00325;product=SPOR domain-containing protein;protein_id=PDP78220.1;transl_table=11 NSLT01000001.1 Genbank gene 72206 73222 . + . ID=gene-CLI76_00330;Name=CLI76_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00330 NSLT01000001.1 Protein Homology CDS 72206 73222 . + 0 ID=cds-PDP78190.1;Parent=gene-CLI76_00330;Dbxref=NCBI_GP:PDP78190.1;Name=PDP78190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874070.1;locus_tag=CLI76_00330;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=PDP78190.1;transl_table=11 NSLT01000001.1 Genbank gene 73249 74727 . + . ID=gene-CLI76_00335;Name=CLI76_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00335 NSLT01000001.1 Protein Homology CDS 73249 74727 . + 0 ID=cds-PDP78191.1;Parent=gene-CLI76_00335;Dbxref=NCBI_GP:PDP78191.1;Name=PDP78191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965395.1;locus_tag=CLI76_00335;product=hydrolase;protein_id=PDP78191.1;transl_table=11 NSLT01000001.1 Genbank gene 75212 76333 . + . ID=gene-CLI76_00340;Name=CLI76_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00340 NSLT01000001.1 Protein Homology CDS 75212 76333 . + 0 ID=cds-PDP78192.1;Parent=gene-CLI76_00340;Dbxref=NCBI_GP:PDP78192.1;Name=PDP78192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874068.1;locus_tag=CLI76_00340;product=glycosyl transferase;protein_id=PDP78192.1;transl_table=11 NSLT01000001.1 Genbank gene 76330 77601 . + . ID=gene-CLI76_00345;Name=CLI76_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00345 NSLT01000001.1 Protein Homology CDS 76330 77601 . + 0 ID=cds-PDP78193.1;Parent=gene-CLI76_00345;Dbxref=NCBI_GP:PDP78193.1;Name=PDP78193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874067.1;locus_tag=CLI76_00345;product=glycosyl transferase;protein_id=PDP78193.1;transl_table=11 NSLT01000001.1 Genbank gene 77738 78202 . + . ID=gene-CLI76_00350;Name=CLI76_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00350 NSLT01000001.1 Protein Homology CDS 77738 78202 . + 0 ID=cds-PDP78194.1;Parent=gene-CLI76_00350;Dbxref=NCBI_GP:PDP78194.1;Name=PDP78194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816646.1;locus_tag=CLI76_00350;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=PDP78194.1;transl_table=11 NSLT01000001.1 Genbank gene 78230 79111 . + . ID=gene-CLI76_00355;Name=CLI76_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00355 NSLT01000001.1 Protein Homology CDS 78230 79111 . + 0 ID=cds-PDP78195.1;Parent=gene-CLI76_00355;Dbxref=NCBI_GP:PDP78195.1;Name=PDP78195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874063.1;locus_tag=CLI76_00355;product=lipid kinase;protein_id=PDP78195.1;transl_table=11 NSLT01000001.1 Genbank gene 79253 79717 . - . ID=gene-CLI76_00360;Name=CLI76_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00360 NSLT01000001.1 Protein Homology CDS 79253 79717 . - 0 ID=cds-PDP78221.1;Parent=gene-CLI76_00360;Dbxref=NCBI_GP:PDP78221.1;Name=PDP78221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585505.1;locus_tag=CLI76_00360;product=hypothetical protein;protein_id=PDP78221.1;transl_table=11 NSLT01000001.1 Genbank gene 79752 80165 . - . ID=gene-CLI76_00365;Name=CLI76_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00365 NSLT01000001.1 Protein Homology CDS 79752 80165 . - 0 ID=cds-PDP78196.1;Parent=gene-CLI76_00365;Dbxref=NCBI_GP:PDP78196.1;Name=PDP78196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873427.1;locus_tag=CLI76_00365;product=polyketide cyclase;protein_id=PDP78196.1;transl_table=11 NSLT01000001.1 Genbank gene 80216 80848 . - . ID=gene-CLI76_00370;Name=CLI76_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00370 NSLT01000001.1 Protein Homology CDS 80216 80848 . - 0 ID=cds-PDP78197.1;Parent=gene-CLI76_00370;Dbxref=NCBI_GP:PDP78197.1;Name=PDP78197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458056.1;locus_tag=CLI76_00370;product=orotate phosphoribosyltransferase;protein_id=PDP78197.1;transl_table=11 NSLT01000001.1 Genbank gene 80959 81780 . - . ID=gene-CLI76_00375;Name=CLI76_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00375 NSLT01000001.1 Protein Homology CDS 80959 81780 . - 0 ID=cds-PDP78198.1;Parent=gene-CLI76_00375;Dbxref=NCBI_GP:PDP78198.1;Name=PDP78198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816643.1;locus_tag=CLI76_00375;product=carbon-nitrogen hydrolase;protein_id=PDP78198.1;transl_table=11 NSLT01000001.1 Genbank gene 81777 82238 . - . ID=gene-CLI76_00380;Name=CLI76_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00380 NSLT01000001.1 Protein Homology CDS 81777 82238 . - 0 ID=cds-PDP78199.1;Parent=gene-CLI76_00380;Dbxref=NCBI_GP:PDP78199.1;Name=PDP78199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873420.1;locus_tag=CLI76_00380;product=acyltransferase;protein_id=PDP78199.1;transl_table=11 NSLT01000001.1 Genbank gene 82376 82801 . - . ID=gene-CLI76_00385;Name=CLI76_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00385 NSLT01000001.1 Protein Homology CDS 82376 82801 . - 0 ID=cds-PDP78222.1;Parent=gene-CLI76_00385;Dbxref=NCBI_GP:PDP78222.1;Name=PDP78222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873418.1;locus_tag=CLI76_00385;product=hypothetical protein;protein_id=PDP78222.1;transl_table=11 NSLT01000001.1 Genbank gene 83166 83345 . + . ID=gene-CLI76_00390;Name=CLI76_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00390 NSLT01000001.1 Protein Homology CDS 83166 83345 . + 0 ID=cds-PDP78200.1;Parent=gene-CLI76_00390;Dbxref=NCBI_GP:PDP78200.1;Name=PDP78200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873428.1;locus_tag=CLI76_00390;product=hypothetical protein;protein_id=PDP78200.1;transl_table=11 NSLT01000001.1 Genbank gene 83668 84348 . - . ID=gene-CLI76_00395;Name=CLI76_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00395 NSLT01000001.1 Protein Homology CDS 83668 84348 . - 0 ID=cds-PDP78201.1;Parent=gene-CLI76_00395;Dbxref=NCBI_GP:PDP78201.1;Name=PDP78201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873419.1;locus_tag=CLI76_00395;product=N-acetyltransferase;protein_id=PDP78201.1;transl_table=11 NSLT01000001.1 Genbank gene 84606 85577 . - . ID=gene-CLI76_00400;Name=CLI76_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00400 NSLT01000001.1 Protein Homology CDS 84606 85577 . - 0 ID=cds-PDP78202.1;Parent=gene-CLI76_00400;Dbxref=NCBI_GP:PDP78202.1;Name=PDP78202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458060.1;locus_tag=CLI76_00400;product=hypothetical protein;protein_id=PDP78202.1;transl_table=11 NSLT01000001.1 Genbank gene 85580 86875 . - . ID=gene-CLI76_00405;Name=CLI76_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00405 NSLT01000001.1 Protein Homology CDS 85580 86875 . - 0 ID=cds-PDP78203.1;Parent=gene-CLI76_00405;Dbxref=NCBI_GP:PDP78203.1;Name=PDP78203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458061.1;locus_tag=CLI76_00405;product=phosphoribosylamine--glycine ligase;protein_id=PDP78203.1;transl_table=11 NSLT01000001.1 Genbank gene 86872 89070 . - . ID=gene-CLI76_00410;Name=CLI76_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00410 NSLT01000001.1 Protein Homology CDS 86872 89070 . - 0 ID=cds-PDP78204.1;Parent=gene-CLI76_00410;Dbxref=NCBI_GP:PDP78204.1;Name=PDP78204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873421.1;locus_tag=CLI76_00410;product=S9 family peptidase;protein_id=PDP78204.1;transl_table=11 NSLT01000001.1 Genbank gene 89102 90556 . - . ID=gene-CLI76_00415;Name=CLI76_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00415 NSLT01000001.1 Protein Homology CDS 89102 90556 . - 0 ID=cds-PDP78205.1;Parent=gene-CLI76_00415;Dbxref=NCBI_GP:PDP78205.1;Name=PDP78205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816636.1;locus_tag=CLI76_00415;product=RNA methyltransferase;protein_id=PDP78205.1;transl_table=11 NSLT01000001.1 Genbank pseudogene 90816 91092 . + . ID=gene-CLI76_00420;Name=CLI76_00420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00420;pseudo=true NSLT01000001.1 Protein Homology CDS 90816 91092 . + 0 ID=cds-CLI76_00420;Parent=gene-CLI76_00420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI76_00420;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000001.1 Genbank gene 91396 92553 . - . ID=gene-CLI76_00425;Name=CLI76_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00425 NSLT01000001.1 Protein Homology CDS 91396 92553 . - 0 ID=cds-PDP78206.1;Parent=gene-CLI76_00425;Dbxref=NCBI_GP:PDP78206.1;Name=PDP78206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874315.1;locus_tag=CLI76_00425;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=PDP78206.1;transl_table=11 NSLT01000001.1 Genbank gene 92550 93077 . - . ID=gene-CLI76_00430;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CLI76_00430 NSLT01000001.1 Protein Homology CDS 92550 93077 . - 0 ID=cds-PDP78207.1;Parent=gene-CLI76_00430;Dbxref=NCBI_GP:PDP78207.1;Name=PDP78207.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874311.1;locus_tag=CLI76_00430;product=16S rRNA processing protein RimM;protein_id=PDP78207.1;transl_table=11 NSLT01000001.1 Genbank gene 93084 94388 . - . ID=gene-CLI76_00435;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CLI76_00435 NSLT01000001.1 Protein Homology CDS 93084 94388 . - 0 ID=cds-PDP78208.1;Parent=gene-CLI76_00435;Dbxref=NCBI_GP:PDP78208.1;Name=PDP78208.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005469204.1;locus_tag=CLI76_00435;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=PDP78208.1;transl_table=11 NSLT01000001.1 Genbank gene 94419 95021 . - . ID=gene-CLI76_00440;Name=CLI76_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00440 NSLT01000001.1 Protein Homology CDS 94419 95021 . - 0 ID=cds-PDP78209.1;Parent=gene-CLI76_00440;Dbxref=NCBI_GP:PDP78209.1;Name=PDP78209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874327.1;locus_tag=CLI76_00440;product=DUF4290 domain-containing protein;protein_id=PDP78209.1;transl_table=11 NSLT01000001.1 Genbank gene 95041 96378 . - . ID=gene-CLI76_00445;Name=CLI76_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00445 NSLT01000001.1 Protein Homology CDS 95041 96378 . - 0 ID=cds-PDP78210.1;Parent=gene-CLI76_00445;Dbxref=NCBI_GP:PDP78210.1;Name=PDP78210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874325.1;locus_tag=CLI76_00445;product=glucose-6-phosphate isomerase;protein_id=PDP78210.1;transl_table=11 NSLT01000001.1 Genbank gene 96411 97415 . - . ID=gene-CLI76_00450;Name=CLI76_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00450 NSLT01000001.1 Protein Homology CDS 96411 97415 . - 0 ID=cds-PDP78211.1;Parent=gene-CLI76_00450;Dbxref=NCBI_GP:PDP78211.1;Name=PDP78211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458068.1;locus_tag=CLI76_00450;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=PDP78211.1;transl_table=11 NSLT01000001.1 Genbank gene 97501 99237 . - . ID=gene-CLI76_00455;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CLI76_00455 NSLT01000001.1 Protein Homology CDS 97501 99237 . - 0 ID=cds-PDP78212.1;Parent=gene-CLI76_00455;Dbxref=NCBI_GP:PDP78212.1;Name=PDP78212.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458069.1;locus_tag=CLI76_00455;product=lysine--tRNA ligase;protein_id=PDP78212.1;transl_table=11 NSLT01000001.1 Genbank gene 99360 100238 . - . ID=gene-CLI76_00460;Name=CLI76_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00460 NSLT01000001.1 Protein Homology CDS 99360 100238 . - 0 ID=cds-PDP78213.1;Parent=gene-CLI76_00460;Dbxref=NCBI_GP:PDP78213.1;Name=PDP78213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467178.1;locus_tag=CLI76_00460;product=phosphorylase;protein_id=PDP78213.1;transl_table=11 NSLT01000001.1 Genbank gene 100309 101730 . - . ID=gene-CLI76_00465;Name=CLI76_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00465 NSLT01000001.1 Protein Homology CDS 100309 101730 . - 0 ID=cds-PDP78214.1;Parent=gene-CLI76_00465;Dbxref=NCBI_GP:PDP78214.1;Name=PDP78214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816629.1;locus_tag=CLI76_00465;product=anaphase-promoting protein;protein_id=PDP78214.1;transl_table=11 NSLT01000001.1 Genbank gene 101809 102090 . + . ID=gene-CLI76_00470;Name=CLI76_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00470 NSLT01000001.1 Protein Homology CDS 101809 102090 . + 0 ID=cds-PDP78215.1;Parent=gene-CLI76_00470;Dbxref=NCBI_GP:PDP78215.1;Name=PDP78215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816628.1;locus_tag=CLI76_00470;product=hypothetical protein;protein_id=PDP78215.1;transl_table=11 NSLT01000001.1 Genbank gene 102252 103538 . - . ID=gene-CLI76_00475;Name=CLI76_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00475 NSLT01000001.1 Protein Homology CDS 102252 103538 . - 0 ID=cds-PDP78216.1;Parent=gene-CLI76_00475;Dbxref=NCBI_GP:PDP78216.1;Name=PDP78216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816627.1;locus_tag=CLI76_00475;product=T9SS C-terminal target domain-containing protein;protein_id=PDP78216.1;transl_table=11 ##sequence-region NSLT01000020.1 1 39743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000020.1 Genbank region 1 39743 . + . ID=NSLT01000020.1:1..39743;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000020.1 Genbank gene 155 931 . - . ID=gene-CLI76_05090;Name=CLI76_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05090 NSLT01000020.1 Protein Homology CDS 155 931 . - 0 ID=cds-PDP77254.1;Parent=gene-CLI76_05090;Dbxref=NCBI_GP:PDP77254.1;Name=PDP77254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875425.1;locus_tag=CLI76_05090;product=DUF4252 domain-containing protein;protein_id=PDP77254.1;transl_table=11 NSLT01000020.1 Genbank gene 947 1507 . - . ID=gene-CLI76_05095;Name=CLI76_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05095 NSLT01000020.1 Protein Homology CDS 947 1507 . - 0 ID=cds-PDP77255.1;Parent=gene-CLI76_05095;Dbxref=NCBI_GP:PDP77255.1;Name=PDP77255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875419.1;locus_tag=CLI76_05095;product=hypothetical protein;protein_id=PDP77255.1;transl_table=11 NSLT01000020.1 Genbank gene 1497 2003 . - . ID=gene-CLI76_05100;Name=CLI76_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05100 NSLT01000020.1 Protein Homology CDS 1497 2003 . - 0 ID=cds-PDP77285.1;Parent=gene-CLI76_05100;Dbxref=NCBI_GP:PDP77285.1;Name=PDP77285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584218.1;locus_tag=CLI76_05100;product=RNA polymerase subunit sigma-70;protein_id=PDP77285.1;transl_table=11 NSLT01000020.1 Genbank gene 2064 2270 . + . ID=gene-CLI76_05105;Name=CLI76_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05105 NSLT01000020.1 GeneMarkS+ CDS 2064 2270 . + 0 ID=cds-PDP77256.1;Parent=gene-CLI76_05105;Dbxref=NCBI_GP:PDP77256.1;Name=PDP77256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_05105;product=hypothetical protein;protein_id=PDP77256.1;transl_table=11 NSLT01000020.1 Genbank gene 2371 4623 . - . ID=gene-CLI76_05110;Name=CLI76_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05110 NSLT01000020.1 Protein Homology CDS 2371 4623 . - 0 ID=cds-PDP77286.1;Parent=gene-CLI76_05110;Dbxref=NCBI_GP:PDP77286.1;Name=PDP77286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457924.1;locus_tag=CLI76_05110;product=hypothetical protein;protein_id=PDP77286.1;transl_table=11 NSLT01000020.1 Genbank gene 5015 5090 . - . ID=gene-CLI76_05115;Name=CLI76_05115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_05115 NSLT01000020.1 tRNAscan-SE tRNA 5015 5090 . - . ID=rna-CLI76_05115;Parent=gene-CLI76_05115;anticodon=(pos:complement(5055..5057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05115;product=tRNA-Phe NSLT01000020.1 tRNAscan-SE exon 5015 5090 . - . ID=exon-CLI76_05115-1;Parent=rna-CLI76_05115;anticodon=(pos:complement(5055..5057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05115;product=tRNA-Phe NSLT01000020.1 Genbank gene 5754 8078 . - . ID=gene-CLI76_05120;Name=CLI76_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05120 NSLT01000020.1 Protein Homology CDS 5754 8078 . - 0 ID=cds-PDP77257.1;Parent=gene-CLI76_05120;Dbxref=NCBI_GP:PDP77257.1;Name=PDP77257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584201.1;locus_tag=CLI76_05120;product=hypothetical protein;protein_id=PDP77257.1;transl_table=11 NSLT01000020.1 Genbank gene 8111 8860 . - . ID=gene-CLI76_05125;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CLI76_05125 NSLT01000020.1 Protein Homology CDS 8111 8860 . - 0 ID=cds-PDP77258.1;Parent=gene-CLI76_05125;Dbxref=NCBI_GP:PDP77258.1;Name=PDP77258.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457926.1;locus_tag=CLI76_05125;product=shikimate dehydrogenase;protein_id=PDP77258.1;transl_table=11 NSLT01000020.1 Genbank gene 8857 9594 . - . ID=gene-CLI76_05130;Name=CLI76_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05130 NSLT01000020.1 Protein Homology CDS 8857 9594 . - 0 ID=cds-PDP77259.1;Parent=gene-CLI76_05130;Dbxref=NCBI_GP:PDP77259.1;Name=PDP77259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964371.1;locus_tag=CLI76_05130;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=PDP77259.1;transl_table=11 NSLT01000020.1 Genbank gene 9626 10567 . - . ID=gene-CLI76_05135;Name=CLI76_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05135 NSLT01000020.1 Protein Homology CDS 9626 10567 . - 0 ID=cds-PDP77260.1;Parent=gene-CLI76_05135;Dbxref=NCBI_GP:PDP77260.1;Name=PDP77260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584198.1;locus_tag=CLI76_05135;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=PDP77260.1;transl_table=11 NSLT01000020.1 Genbank gene 10624 11616 . - . ID=gene-CLI76_05140;Name=CLI76_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05140 NSLT01000020.1 Protein Homology CDS 10624 11616 . - 0 ID=cds-PDP77261.1;Parent=gene-CLI76_05140;Dbxref=NCBI_GP:PDP77261.1;Name=PDP77261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815735.1;locus_tag=CLI76_05140;product=PhoH family protein;protein_id=PDP77261.1;transl_table=11 NSLT01000020.1 Genbank gene 12528 14843 . - . ID=gene-CLI76_05145;Name=CLI76_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05145 NSLT01000020.1 Protein Homology CDS 12528 14843 . - 0 ID=cds-PDP77262.1;Parent=gene-CLI76_05145;Dbxref=NCBI_GP:PDP77262.1;Name=PDP77262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584196.1;locus_tag=CLI76_05145;product=alpha-mannosidase;protein_id=PDP77262.1;transl_table=11 NSLT01000020.1 Genbank gene 14982 16199 . + . ID=gene-CLI76_05150;Name=CLI76_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05150 NSLT01000020.1 Protein Homology CDS 14982 16199 . + 0 ID=cds-PDP77263.1;Parent=gene-CLI76_05150;Dbxref=NCBI_GP:PDP77263.1;Name=PDP77263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874383.1;locus_tag=CLI76_05150;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=PDP77263.1;transl_table=11 NSLT01000020.1 Genbank gene 16382 16466 . - . ID=gene-CLI76_05155;Name=CLI76_05155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_05155 NSLT01000020.1 tRNAscan-SE tRNA 16382 16466 . - . ID=rna-CLI76_05155;Parent=gene-CLI76_05155;anticodon=(pos:complement(16430..16432));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05155;product=tRNA-Leu NSLT01000020.1 tRNAscan-SE exon 16382 16466 . - . ID=exon-CLI76_05155-1;Parent=rna-CLI76_05155;anticodon=(pos:complement(16430..16432));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05155;product=tRNA-Leu NSLT01000020.1 Genbank gene 16605 17519 . - . ID=gene-CLI76_05160;Name=CLI76_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05160 NSLT01000020.1 Protein Homology CDS 16605 17519 . - 0 ID=cds-PDP77264.1;Parent=gene-CLI76_05160;Dbxref=NCBI_GP:PDP77264.1;Name=PDP77264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457934.1;locus_tag=CLI76_05160;product=restriction endonuclease;protein_id=PDP77264.1;transl_table=11 NSLT01000020.1 Genbank gene 18304 18501 . + . ID=gene-CLI76_05165;Name=CLI76_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05165 NSLT01000020.1 GeneMarkS+ CDS 18304 18501 . + 0 ID=cds-PDP77265.1;Parent=gene-CLI76_05165;Dbxref=NCBI_GP:PDP77265.1;Name=PDP77265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_05165;product=hypothetical protein;protein_id=PDP77265.1;transl_table=11 NSLT01000020.1 Genbank gene 18620 19285 . + . ID=gene-CLI76_05170;Name=CLI76_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05170 NSLT01000020.1 Protein Homology CDS 18620 19285 . + 0 ID=cds-PDP77266.1;Parent=gene-CLI76_05170;Dbxref=NCBI_GP:PDP77266.1;Name=PDP77266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584192.1;locus_tag=CLI76_05170;product=phosphatidylserine decarboxylase proenzyme;protein_id=PDP77266.1;transl_table=11 NSLT01000020.1 Genbank gene 19287 19997 . + . ID=gene-CLI76_05175;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CLI76_05175 NSLT01000020.1 Protein Homology CDS 19287 19997 . + 0 ID=cds-PDP77267.1;Parent=gene-CLI76_05175;Dbxref=NCBI_GP:PDP77267.1;Name=PDP77267.1;gbkey=CDS;gene=pssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584191.1;locus_tag=CLI76_05175;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=PDP77267.1;transl_table=11 NSLT01000020.1 Genbank gene 20064 20309 . + . ID=gene-CLI76_05180;Name=CLI76_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05180 NSLT01000020.1 Protein Homology CDS 20064 20309 . + 0 ID=cds-PDP77268.1;Parent=gene-CLI76_05180;Dbxref=NCBI_GP:PDP77268.1;Name=PDP77268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584190.1;locus_tag=CLI76_05180;product=hypothetical protein;protein_id=PDP77268.1;transl_table=11 NSLT01000020.1 Genbank gene 20590 22071 . + . ID=gene-CLI76_05185;Name=CLI76_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05185 NSLT01000020.1 Protein Homology CDS 20590 22071 . + 0 ID=cds-PDP77269.1;Parent=gene-CLI76_05185;Dbxref=NCBI_GP:PDP77269.1;Name=PDP77269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008860821.1;locus_tag=CLI76_05185;product=proline--tRNA ligase;protein_id=PDP77269.1;transl_table=11 NSLT01000020.1 Genbank gene 22126 22455 . + . ID=gene-CLI76_05190;Name=CLI76_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05190 NSLT01000020.1 Protein Homology CDS 22126 22455 . + 0 ID=cds-PDP77270.1;Parent=gene-CLI76_05190;Dbxref=NCBI_GP:PDP77270.1;Name=PDP77270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964616.1;locus_tag=CLI76_05190;product=hypothetical protein;protein_id=PDP77270.1;transl_table=11 NSLT01000020.1 Genbank gene 22470 23237 . + . ID=gene-CLI76_05195;Name=CLI76_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05195 NSLT01000020.1 Protein Homology CDS 22470 23237 . + 0 ID=cds-PDP77271.1;Parent=gene-CLI76_05195;Dbxref=NCBI_GP:PDP77271.1;Name=PDP77271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457937.1;locus_tag=CLI76_05195;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=PDP77271.1;transl_table=11 NSLT01000020.1 Genbank gene 23257 24375 . + . ID=gene-CLI76_05200;Name=CLI76_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05200 NSLT01000020.1 Protein Homology CDS 23257 24375 . + 0 ID=cds-PDP77272.1;Parent=gene-CLI76_05200;Dbxref=NCBI_GP:PDP77272.1;Name=PDP77272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584185.1;locus_tag=CLI76_05200;product=MRP family ATP-binding protein;protein_id=PDP77272.1;transl_table=11 NSLT01000020.1 Genbank gene 24402 24800 . + . ID=gene-CLI76_05205;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CLI76_05205 NSLT01000020.1 cmsearch RNase_P_RNA 24402 24800 . + . ID=rna-CLI76_05205;Parent=gene-CLI76_05205;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_05205;product=RNase P RNA component class A NSLT01000020.1 cmsearch exon 24402 24800 . + . ID=exon-CLI76_05205-1;Parent=rna-CLI76_05205;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_05205;product=RNase P RNA component class A NSLT01000020.1 Genbank gene 24881 26263 . + . ID=gene-CLI76_05210;Name=CLI76_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05210 NSLT01000020.1 Protein Homology CDS 24881 26263 . + 0 ID=cds-PDP77273.1;Parent=gene-CLI76_05210;Dbxref=NCBI_GP:PDP77273.1;Name=PDP77273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964613.1;locus_tag=CLI76_05210;product=YihY/virulence factor BrkB family protein;protein_id=PDP77273.1;transl_table=11 NSLT01000020.1 Genbank gene 26297 27268 . - . ID=gene-CLI76_05215;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CLI76_05215 NSLT01000020.1 Protein Homology CDS 26297 27268 . - 0 ID=cds-PDP77274.1;Parent=gene-CLI76_05215;Dbxref=NCBI_GP:PDP77274.1;Name=PDP77274.1;gbkey=CDS;gene=ribF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584183.1;locus_tag=CLI76_05215;product=riboflavin biosynthesis protein RibF;protein_id=PDP77274.1;transl_table=11 NSLT01000020.1 Genbank gene 27256 28551 . - . ID=gene-CLI76_05220;Name=CLI76_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05220 NSLT01000020.1 Protein Homology CDS 27256 28551 . - 0 ID=cds-PDP77275.1;Parent=gene-CLI76_05220;Dbxref=NCBI_GP:PDP77275.1;Name=PDP77275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874395.1;locus_tag=CLI76_05220;product=peptidase M24;protein_id=PDP77275.1;transl_table=11 NSLT01000020.1 Genbank gene 28563 29423 . - . ID=gene-CLI76_05225;Name=CLI76_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05225 NSLT01000020.1 Protein Homology CDS 28563 29423 . - 0 ID=cds-PDP77287.1;Parent=gene-CLI76_05225;Dbxref=NCBI_GP:PDP77287.1;Name=PDP77287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815721.1;locus_tag=CLI76_05225;product=DUF4292 domain-containing protein;protein_id=PDP77287.1;transl_table=11 NSLT01000020.1 Genbank gene 29423 31162 . - . ID=gene-CLI76_05230;Name=CLI76_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05230 NSLT01000020.1 Protein Homology CDS 29423 31162 . - 0 ID=cds-PDP77276.1;Parent=gene-CLI76_05230;Dbxref=NCBI_GP:PDP77276.1;Name=PDP77276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584180.1;locus_tag=CLI76_05230;product=hypothetical protein;protein_id=PDP77276.1;transl_table=11 NSLT01000020.1 Genbank gene 31190 31624 . - . ID=gene-CLI76_05235;Name=CLI76_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05235 NSLT01000020.1 Protein Homology CDS 31190 31624 . - 0 ID=cds-PDP77277.1;Parent=gene-CLI76_05235;Dbxref=NCBI_GP:PDP77277.1;Name=PDP77277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956168.1;locus_tag=CLI76_05235;product=dUTP diphosphatase;protein_id=PDP77277.1;transl_table=11 NSLT01000020.1 Genbank gene 31681 33426 . - . ID=gene-CLI76_05240;Name=CLI76_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05240 NSLT01000020.1 Protein Homology CDS 31681 33426 . - 0 ID=cds-PDP77288.1;Parent=gene-CLI76_05240;Dbxref=NCBI_GP:PDP77288.1;Name=PDP77288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457945.1;locus_tag=CLI76_05240;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=PDP77288.1;transl_table=11 NSLT01000020.1 Genbank gene 33600 34106 . - . ID=gene-CLI76_05245;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CLI76_05245 NSLT01000020.1 Protein Homology CDS 33600 34106 . - 0 ID=cds-PDP77278.1;Parent=gene-CLI76_05245;Dbxref=NCBI_GP:PDP77278.1;Name=PDP77278.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009860133.1;locus_tag=CLI76_05245;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=PDP77278.1;transl_table=11 NSLT01000020.1 Genbank gene 34107 34487 . - . ID=gene-CLI76_05250;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CLI76_05250 NSLT01000020.1 Protein Homology CDS 34107 34487 . - 0 ID=cds-PDP77279.1;Parent=gene-CLI76_05250;Dbxref=NCBI_GP:PDP77279.1;Name=PDP77279.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584176.1;locus_tag=CLI76_05250;product=glycine cleavage system protein H;protein_id=PDP77279.1;transl_table=11 NSLT01000020.1 Genbank gene 34655 35662 . - . ID=gene-CLI76_05255;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CLI76_05255 NSLT01000020.1 Protein Homology CDS 34655 35662 . - 0 ID=cds-PDP77280.1;Parent=gene-CLI76_05255;Dbxref=NCBI_GP:PDP77280.1;Name=PDP77280.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457946.1;locus_tag=CLI76_05255;product=DNA polymerase III subunit delta;protein_id=PDP77280.1;transl_table=11 NSLT01000020.1 Genbank gene 35681 36457 . - . ID=gene-CLI76_05260;Name=CLI76_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05260 NSLT01000020.1 Protein Homology CDS 35681 36457 . - 0 ID=cds-PDP77281.1;Parent=gene-CLI76_05260;Dbxref=NCBI_GP:PDP77281.1;Name=PDP77281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584174.1;locus_tag=CLI76_05260;product=AMP nucleosidase;protein_id=PDP77281.1;transl_table=11 NSLT01000020.1 Genbank gene 36526 36999 . + . ID=gene-CLI76_05265;Name=CLI76_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05265 NSLT01000020.1 Protein Homology CDS 36526 36999 . + 0 ID=cds-PDP77282.1;Parent=gene-CLI76_05265;Dbxref=NCBI_GP:PDP77282.1;Name=PDP77282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964600.1;locus_tag=CLI76_05265;product=hypothetical protein;protein_id=PDP77282.1;transl_table=11 NSLT01000020.1 Genbank gene 37002 37961 . + . ID=gene-CLI76_05270;Name=CLI76_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05270 NSLT01000020.1 Protein Homology CDS 37002 37961 . + 0 ID=cds-PDP77283.1;Parent=gene-CLI76_05270;Dbxref=NCBI_GP:PDP77283.1;Name=PDP77283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457948.1;locus_tag=CLI76_05270;product=ABC transporter ATP-binding protein;protein_id=PDP77283.1;transl_table=11 NSLT01000020.1 Genbank gene 37966 39294 . + . ID=gene-CLI76_05275;Name=CLI76_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05275 NSLT01000020.1 Protein Homology CDS 37966 39294 . + 0 ID=cds-PDP77284.1;Parent=gene-CLI76_05275;Dbxref=NCBI_GP:PDP77284.1;Name=PDP77284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956166.1;locus_tag=CLI76_05275;product=ABC transporter permease;protein_id=PDP77284.1;transl_table=11 NSLT01000020.1 Genbank gene 39630 39743 . - . ID=gene-CLI76_05280;Name=CLI76_05280;end_range=39743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05280;partial=true NSLT01000020.1 Protein Homology CDS 39630 39743 . - 0 ID=cds-PDP77289.1;Parent=gene-CLI76_05280;Dbxref=NCBI_GP:PDP77289.1;Name=PDP77289.1;end_range=39743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_05280;partial=true;product=IS982 family transposase;protein_id=PDP77289.1;transl_table=11 ##sequence-region NSLT01000021.1 1 36927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000021.1 Genbank region 1 36927 . + . ID=NSLT01000021.1:1..36927;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000021.1 Genbank gene 1 191 . + . ID=gene-CLI76_05285;Name=CLI76_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05285;partial=true;start_range=.,1 NSLT01000021.1 Protein Homology CDS 1 191 . + 2 ID=cds-PDP77219.1;Parent=gene-CLI76_05285;Dbxref=NCBI_GP:PDP77219.1;Name=PDP77219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875259.1;locus_tag=CLI76_05285;partial=true;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=PDP77219.1;start_range=.,1;transl_table=11 NSLT01000021.1 Genbank gene 622 2763 . + . ID=gene-CLI76_05290;Name=CLI76_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05290 NSLT01000021.1 Protein Homology CDS 622 2763 . + 0 ID=cds-PDP77220.1;Parent=gene-CLI76_05290;Dbxref=NCBI_GP:PDP77220.1;Name=PDP77220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583797.1;locus_tag=CLI76_05290;product=aspartate--tRNA ligase;protein_id=PDP77220.1;transl_table=11 NSLT01000021.1 Genbank gene 2775 3911 . + . ID=gene-CLI76_05295;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=CLI76_05295 NSLT01000021.1 Protein Homology CDS 2775 3911 . + 0 ID=cds-PDP77221.1;Parent=gene-CLI76_05295;Dbxref=NCBI_GP:PDP77221.1;Name=PDP77221.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965227.1;locus_tag=CLI76_05295;product=carboxynorspermidine decarboxylase;protein_id=PDP77221.1;transl_table=11 NSLT01000021.1 Genbank gene 3938 4891 . + . ID=gene-CLI76_05300;Name=CLI76_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05300 NSLT01000021.1 Protein Homology CDS 3938 4891 . + 0 ID=cds-PDP77222.1;Parent=gene-CLI76_05300;Dbxref=NCBI_GP:PDP77222.1;Name=PDP77222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857252.1;locus_tag=CLI76_05300;product=signal recognition particle-docking protein FtsY;protein_id=PDP77222.1;transl_table=11 NSLT01000021.1 Genbank gene 4888 6192 . + . ID=gene-CLI76_05305;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CLI76_05305 NSLT01000021.1 Protein Homology CDS 4888 6192 . + 0 ID=cds-PDP77223.1;Parent=gene-CLI76_05305;Dbxref=NCBI_GP:PDP77223.1;Name=PDP77223.1;gbkey=CDS;gene=rimO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457376.1;locus_tag=CLI76_05305;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=PDP77223.1;transl_table=11 NSLT01000021.1 Genbank gene 6229 7497 . + . ID=gene-CLI76_05310;Name=CLI76_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05310 NSLT01000021.1 Protein Homology CDS 6229 7497 . + 0 ID=cds-PDP77224.1;Parent=gene-CLI76_05310;Dbxref=NCBI_GP:PDP77224.1;Name=PDP77224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815403.1;locus_tag=CLI76_05310;product=hypothetical protein;protein_id=PDP77224.1;transl_table=11 NSLT01000021.1 Genbank gene 7525 8778 . + . ID=gene-CLI76_05315;Name=CLI76_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05315 NSLT01000021.1 Protein Homology CDS 7525 8778 . + 0 ID=cds-PDP77225.1;Parent=gene-CLI76_05315;Dbxref=NCBI_GP:PDP77225.1;Name=PDP77225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457374.1;locus_tag=CLI76_05315;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP77225.1;transl_table=11 NSLT01000021.1 Genbank gene 8765 9304 . + . ID=gene-CLI76_05320;Name=CLI76_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05320 NSLT01000021.1 Protein Homology CDS 8765 9304 . + 0 ID=cds-PDP77226.1;Parent=gene-CLI76_05320;Dbxref=NCBI_GP:PDP77226.1;Name=PDP77226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965232.1;locus_tag=CLI76_05320;product=hypothetical protein;protein_id=PDP77226.1;transl_table=11 NSLT01000021.1 Genbank gene 9317 10024 . + . ID=gene-CLI76_05325;Name=CLI76_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05325 NSLT01000021.1 Protein Homology CDS 9317 10024 . + 0 ID=cds-PDP77227.1;Parent=gene-CLI76_05325;Dbxref=NCBI_GP:PDP77227.1;Name=PDP77227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815401.1;locus_tag=CLI76_05325;product=hypothetical protein;protein_id=PDP77227.1;transl_table=11 NSLT01000021.1 Genbank gene 10027 10413 . + . ID=gene-CLI76_05330;Name=CLI76_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05330 NSLT01000021.1 Protein Homology CDS 10027 10413 . + 0 ID=cds-PDP77228.1;Parent=gene-CLI76_05330;Dbxref=NCBI_GP:PDP77228.1;Name=PDP77228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583789.1;locus_tag=CLI76_05330;product=preprotein translocase subunit SecG;protein_id=PDP77228.1;transl_table=11 NSLT01000021.1 Genbank gene 10763 11788 . + . ID=gene-CLI76_05335;Name=CLI76_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05335 NSLT01000021.1 Protein Homology CDS 10763 11788 . + 0 ID=cds-PDP77229.1;Parent=gene-CLI76_05335;Dbxref=NCBI_GP:PDP77229.1;Name=PDP77229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875332.1;locus_tag=CLI76_05335;product=agmatine deiminase;protein_id=PDP77229.1;transl_table=11 NSLT01000021.1 Genbank gene 11806 12684 . + . ID=gene-CLI76_05340;Name=CLI76_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05340 NSLT01000021.1 Protein Homology CDS 11806 12684 . + 0 ID=cds-PDP77230.1;Parent=gene-CLI76_05340;Dbxref=NCBI_GP:PDP77230.1;Name=PDP77230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583787.1;locus_tag=CLI76_05340;product=acyltransferase;protein_id=PDP77230.1;transl_table=11 NSLT01000021.1 Genbank gene 12900 13676 . + . ID=gene-CLI76_05345;Name=CLI76_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05345 NSLT01000021.1 Protein Homology CDS 12900 13676 . + 0 ID=cds-PDP77231.1;Parent=gene-CLI76_05345;Dbxref=NCBI_GP:PDP77231.1;Name=PDP77231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815398.1;locus_tag=CLI76_05345;product=chromosome partitioning protein ParA;protein_id=PDP77231.1;transl_table=11 NSLT01000021.1 Genbank gene 13684 14553 . + . ID=gene-CLI76_05350;Name=CLI76_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05350 NSLT01000021.1 Protein Homology CDS 13684 14553 . + 0 ID=cds-PDP77232.1;Parent=gene-CLI76_05350;Dbxref=NCBI_GP:PDP77232.1;Name=PDP77232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583785.1;locus_tag=CLI76_05350;product=chromosome partitioning protein ParB;protein_id=PDP77232.1;transl_table=11 NSLT01000021.1 Genbank gene 14573 15280 . + . ID=gene-CLI76_05355;Name=CLI76_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05355 NSLT01000021.1 Protein Homology CDS 14573 15280 . + 0 ID=cds-PDP77233.1;Parent=gene-CLI76_05355;Dbxref=NCBI_GP:PDP77233.1;Name=PDP77233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815397.1;locus_tag=CLI76_05355;product=hypothetical protein;protein_id=PDP77233.1;transl_table=11 NSLT01000021.1 Genbank gene 15290 16645 . + . ID=gene-CLI76_05360;Name=CLI76_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05360 NSLT01000021.1 Protein Homology CDS 15290 16645 . + 0 ID=cds-PDP77234.1;Parent=gene-CLI76_05360;Dbxref=NCBI_GP:PDP77234.1;Name=PDP77234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583783.1;locus_tag=CLI76_05360;product=lytic transglycosylase;protein_id=PDP77234.1;transl_table=11 NSLT01000021.1 Genbank gene 16828 17709 . - . ID=gene-CLI76_05365;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CLI76_05365 NSLT01000021.1 Protein Homology CDS 16828 17709 . - 0 ID=cds-PDP77251.1;Parent=gene-CLI76_05365;Dbxref=NCBI_GP:PDP77251.1;Name=PDP77251.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010799941.1;locus_tag=CLI76_05365;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=PDP77251.1;transl_table=11 NSLT01000021.1 Genbank gene 17824 19278 . - . ID=gene-CLI76_05370;Name=CLI76_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05370 NSLT01000021.1 Protein Homology CDS 17824 19278 . - 0 ID=cds-PDP77235.1;Parent=gene-CLI76_05370;Dbxref=NCBI_GP:PDP77235.1;Name=PDP77235.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815394.1;locus_tag=CLI76_05370;product=cytosol nonspecific dipeptidase;protein_id=PDP77235.1;transl_table=11 NSLT01000021.1 Genbank gene 19309 20358 . - . ID=gene-CLI76_05375;Name=CLI76_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05375 NSLT01000021.1 Protein Homology CDS 19309 20358 . - 0 ID=cds-PDP77236.1;Parent=gene-CLI76_05375;Dbxref=NCBI_GP:PDP77236.1;Name=PDP77236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965244.1;locus_tag=CLI76_05375;product=TIGR00374 family protein;protein_id=PDP77236.1;transl_table=11 NSLT01000021.1 Genbank gene 20489 21265 . + . ID=gene-CLI76_05380;Name=CLI76_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05380 NSLT01000021.1 Protein Homology CDS 20489 21265 . + 0 ID=cds-PDP77237.1;Parent=gene-CLI76_05380;Dbxref=NCBI_GP:PDP77237.1;Name=PDP77237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815393.1;locus_tag=CLI76_05380;product=ribosomal RNA small subunit methyltransferase A;protein_id=PDP77237.1;transl_table=11 NSLT01000021.1 Genbank gene 21297 22649 . + . ID=gene-CLI76_05385;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CLI76_05385 NSLT01000021.1 Protein Homology CDS 21297 22649 . + 0 ID=cds-PDP77238.1;Parent=gene-CLI76_05385;Dbxref=NCBI_GP:PDP77238.1;Name=PDP77238.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815392.1;locus_tag=CLI76_05385;product=magnesium transporter;protein_id=PDP77238.1;transl_table=11 NSLT01000021.1 Genbank gene 22668 24173 . + . ID=gene-CLI76_05390;Name=CLI76_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05390 NSLT01000021.1 Protein Homology CDS 22668 24173 . + 0 ID=cds-PDP77239.1;Parent=gene-CLI76_05390;Dbxref=NCBI_GP:PDP77239.1;Name=PDP77239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965247.1;locus_tag=CLI76_05390;product=polysaccharide biosynthesis protein;protein_id=PDP77239.1;transl_table=11 NSLT01000021.1 Genbank gene 24170 25480 . + . ID=gene-CLI76_05395;Name=CLI76_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05395 NSLT01000021.1 Protein Homology CDS 24170 25480 . + 0 ID=cds-PDP77240.1;Parent=gene-CLI76_05395;Dbxref=NCBI_GP:PDP77240.1;Name=PDP77240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457362.1;locus_tag=CLI76_05395;product=CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase;protein_id=PDP77240.1;transl_table=11 NSLT01000021.1 Genbank pseudogene 25541 25750 . + . ID=gene-CLI76_05400;Name=CLI76_05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05400;pseudo=true NSLT01000021.1 Protein Homology CDS 25541 25750 . + 0 ID=cds-CLI76_05400;Parent=gene-CLI76_05400;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965249.1;locus_tag=CLI76_05400;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000021.1 Genbank gene 25764 26510 . + . ID=gene-CLI76_05405;Name=CLI76_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05405 NSLT01000021.1 Protein Homology CDS 25764 26510 . + 0 ID=cds-PDP77241.1;Parent=gene-CLI76_05405;Dbxref=NCBI_GP:PDP77241.1;Name=PDP77241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006842966.1;locus_tag=CLI76_05405;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=PDP77241.1;transl_table=11 NSLT01000021.1 Genbank gene 26649 27797 . - . ID=gene-CLI76_05410;Name=CLI76_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05410 NSLT01000021.1 Protein Homology CDS 26649 27797 . - 0 ID=cds-PDP77242.1;Parent=gene-CLI76_05410;Dbxref=NCBI_GP:PDP77242.1;Name=PDP77242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583773.1;locus_tag=CLI76_05410;product=glycosyltransferase family 1 protein;protein_id=PDP77242.1;transl_table=11 NSLT01000021.1 Genbank gene 27814 28788 . - . ID=gene-CLI76_05415;Name=CLI76_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05415 NSLT01000021.1 Protein Homology CDS 27814 28788 . - 0 ID=cds-PDP77243.1;Parent=gene-CLI76_05415;Dbxref=NCBI_GP:PDP77243.1;Name=PDP77243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583772.1;locus_tag=CLI76_05415;product=lipopolysaccharide kinase;protein_id=PDP77243.1;transl_table=11 NSLT01000021.1 Genbank gene 28795 29832 . - . ID=gene-CLI76_05420;Name=CLI76_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05420 NSLT01000021.1 Protein Homology CDS 28795 29832 . - 0 ID=cds-PDP77252.1;Parent=gene-CLI76_05420;Dbxref=NCBI_GP:PDP77252.1;Name=PDP77252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457358.1;locus_tag=CLI76_05420;product=ferrochelatase;protein_id=PDP77252.1;transl_table=11 NSLT01000021.1 Genbank gene 30328 31563 . + . ID=gene-CLI76_05425;Name=CLI76_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05425 NSLT01000021.1 Protein Homology CDS 30328 31563 . + 0 ID=cds-PDP77253.1;Parent=gene-CLI76_05425;Dbxref=NCBI_GP:PDP77253.1;Name=PDP77253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457357.1;locus_tag=CLI76_05425;product=alkaline phosphatase family protein;protein_id=PDP77253.1;transl_table=11 NSLT01000021.1 Genbank gene 31560 32108 . + . ID=gene-CLI76_05430;Name=CLI76_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05430 NSLT01000021.1 Protein Homology CDS 31560 32108 . + 0 ID=cds-PDP77244.1;Parent=gene-CLI76_05430;Dbxref=NCBI_GP:PDP77244.1;Name=PDP77244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583769.1;locus_tag=CLI76_05430;product=DUF4924 domain-containing protein;protein_id=PDP77244.1;transl_table=11 NSLT01000021.1 Genbank gene 32112 32732 . + . ID=gene-CLI76_05435;Name=CLI76_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05435 NSLT01000021.1 Protein Homology CDS 32112 32732 . + 0 ID=cds-PDP77245.1;Parent=gene-CLI76_05435;Dbxref=NCBI_GP:PDP77245.1;Name=PDP77245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815381.1;locus_tag=CLI76_05435;product=YigZ family protein;protein_id=PDP77245.1;transl_table=11 NSLT01000021.1 Genbank gene 32791 33366 . - . ID=gene-CLI76_05440;Name=CLI76_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05440 NSLT01000021.1 Protein Homology CDS 32791 33366 . - 0 ID=cds-PDP77246.1;Parent=gene-CLI76_05440;Dbxref=NCBI_GP:PDP77246.1;Name=PDP77246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583767.1;locus_tag=CLI76_05440;product=hypothetical protein;protein_id=PDP77246.1;transl_table=11 NSLT01000021.1 Genbank gene 33561 33827 . - . ID=gene-CLI76_05445;Name=CLI76_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05445 NSLT01000021.1 Protein Homology CDS 33561 33827 . - 0 ID=cds-PDP77247.1;Parent=gene-CLI76_05445;Dbxref=NCBI_GP:PDP77247.1;Name=PDP77247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583766.1;locus_tag=CLI76_05445;product=HU family DNA-binding protein;protein_id=PDP77247.1;transl_table=11 NSLT01000021.1 Genbank gene 34138 35295 . - . ID=gene-CLI76_05450;Name=CLI76_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05450 NSLT01000021.1 Protein Homology CDS 34138 35295 . - 0 ID=cds-PDP77248.1;Parent=gene-CLI76_05450;Dbxref=NCBI_GP:PDP77248.1;Name=PDP77248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583765.1;locus_tag=CLI76_05450;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=PDP77248.1;transl_table=11 NSLT01000021.1 Genbank gene 35301 35999 . - . ID=gene-CLI76_05455;Name=CLI76_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05455 NSLT01000021.1 Protein Homology CDS 35301 35999 . - 0 ID=cds-PDP77249.1;Parent=gene-CLI76_05455;Dbxref=NCBI_GP:PDP77249.1;Name=PDP77249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457352.1;locus_tag=CLI76_05455;product=glycosyl transferase;protein_id=PDP77249.1;transl_table=11 NSLT01000021.1 Genbank gene 36041 36927 . - . ID=gene-CLI76_05460;Name=CLI76_05460;end_range=36927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05460;partial=true NSLT01000021.1 Protein Homology CDS 36041 36927 . - 2 ID=cds-PDP77250.1;Parent=gene-CLI76_05460;Dbxref=NCBI_GP:PDP77250.1;Name=PDP77250.1;end_range=36927,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457351.1;locus_tag=CLI76_05460;partial=true;product=glycosyl transferase family 2;protein_id=PDP77250.1;transl_table=11 ##sequence-region NSLT01000022.1 1 35120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000022.1 Genbank region 1 35120 . + . ID=NSLT01000022.1:1..35120;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000022.1 Genbank gene 1 848 . - . ID=gene-CLI76_05465;Name=CLI76_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05465;partial=true;start_range=.,1 NSLT01000022.1 Protein Homology CDS 1 848 . - 0 ID=cds-PDP77217.1;Parent=gene-CLI76_05465;Dbxref=NCBI_GP:PDP77217.1;Name=PDP77217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_05465;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77217.1;start_range=.,1;transl_table=11 NSLT01000022.1 Genbank gene 1841 2929 . - . ID=gene-CLI76_05470;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CLI76_05470 NSLT01000022.1 Protein Homology CDS 1841 2929 . - 0 ID=cds-PDP77190.1;Parent=gene-CLI76_05470;Dbxref=NCBI_GP:PDP77190.1;Name=PDP77190.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874565.1;locus_tag=CLI76_05470;product=glycine cleavage system protein T;protein_id=PDP77190.1;transl_table=11 NSLT01000022.1 Genbank gene 3004 4068 . - . ID=gene-CLI76_05475;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CLI76_05475 NSLT01000022.1 Protein Homology CDS 3004 4068 . - 0 ID=cds-PDP77191.1;Parent=gene-CLI76_05475;Dbxref=NCBI_GP:PDP77191.1;Name=PDP77191.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584097.1;locus_tag=CLI76_05475;product=dTDP-glucose 4%2C6-dehydratase;protein_id=PDP77191.1;transl_table=11 NSLT01000022.1 Genbank gene 4075 4932 . - . ID=gene-CLI76_05480;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CLI76_05480 NSLT01000022.1 Protein Homology CDS 4075 4932 . - 0 ID=cds-PDP77192.1;Parent=gene-CLI76_05480;Dbxref=NCBI_GP:PDP77192.1;Name=PDP77192.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584096.1;locus_tag=CLI76_05480;product=dTDP-4-dehydrorhamnose reductase;protein_id=PDP77192.1;transl_table=11 NSLT01000022.1 Genbank gene 4929 5519 . - . ID=gene-CLI76_05485;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CLI76_05485 NSLT01000022.1 Protein Homology CDS 4929 5519 . - 0 ID=cds-PDP77193.1;Parent=gene-CLI76_05485;Dbxref=NCBI_GP:PDP77193.1;Name=PDP77193.1;gbkey=CDS;gene=rfbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457591.1;locus_tag=CLI76_05485;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=PDP77193.1;transl_table=11 NSLT01000022.1 Genbank gene 5534 6403 . - . ID=gene-CLI76_05490;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CLI76_05490 NSLT01000022.1 Protein Homology CDS 5534 6403 . - 0 ID=cds-PDP77194.1;Parent=gene-CLI76_05490;Dbxref=NCBI_GP:PDP77194.1;Name=PDP77194.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584094.1;locus_tag=CLI76_05490;product=glucose-1-phosphate thymidylyltransferase;protein_id=PDP77194.1;transl_table=11 NSLT01000022.1 Genbank gene 6518 8473 . - . ID=gene-CLI76_05495;Name=CLI76_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05495 NSLT01000022.1 Protein Homology CDS 6518 8473 . - 0 ID=cds-PDP77195.1;Parent=gene-CLI76_05495;Dbxref=NCBI_GP:PDP77195.1;Name=PDP77195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584093.1;locus_tag=CLI76_05495;product=sulfatase;protein_id=PDP77195.1;transl_table=11 NSLT01000022.1 Genbank gene 8558 9796 . - . ID=gene-CLI76_05500;Name=CLI76_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05500 NSLT01000022.1 Protein Homology CDS 8558 9796 . - 0 ID=cds-PDP77196.1;Parent=gene-CLI76_05500;Dbxref=NCBI_GP:PDP77196.1;Name=PDP77196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815623.1;locus_tag=CLI76_05500;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=PDP77196.1;transl_table=11 NSLT01000022.1 Genbank gene 9821 11344 . - . ID=gene-CLI76_05505;Name=CLI76_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05505 NSLT01000022.1 Protein Homology CDS 9821 11344 . - 0 ID=cds-PDP77218.1;Parent=gene-CLI76_05505;Dbxref=NCBI_GP:PDP77218.1;Name=PDP77218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457588.1;locus_tag=CLI76_05505;product=glutamate--tRNA ligase;protein_id=PDP77218.1;transl_table=11 NSLT01000022.1 Genbank pseudogene 11664 11866 . + . ID=gene-CLI76_05510;Name=CLI76_05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05510;pseudo=true NSLT01000022.1 Protein Homology CDS 11664 11866 . + 0 ID=cds-CLI76_05510;Parent=gene-CLI76_05510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584862.1;locus_tag=CLI76_05510;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000022.1 Genbank gene 12495 12878 . - . ID=gene-CLI76_05515;Name=CLI76_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05515 NSLT01000022.1 Protein Homology CDS 12495 12878 . - 0 ID=cds-PDP77197.1;Parent=gene-CLI76_05515;Dbxref=NCBI_GP:PDP77197.1;Name=PDP77197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457586.1;locus_tag=CLI76_05515;product=rhodanese-like domain-containing protein;protein_id=PDP77197.1;transl_table=11 NSLT01000022.1 Genbank gene 12851 14266 . - . ID=gene-CLI76_05520;Name=CLI76_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05520 NSLT01000022.1 Protein Homology CDS 12851 14266 . - 0 ID=cds-PDP77198.1;Parent=gene-CLI76_05520;Dbxref=NCBI_GP:PDP77198.1;Name=PDP77198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457585.1;locus_tag=CLI76_05520;product=MBL fold metallo-hydrolase;protein_id=PDP77198.1;transl_table=11 NSLT01000022.1 Genbank gene 14359 15165 . - . ID=gene-CLI76_05525;Name=CLI76_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05525 NSLT01000022.1 Protein Homology CDS 14359 15165 . - 0 ID=cds-PDP77199.1;Parent=gene-CLI76_05525;Dbxref=NCBI_GP:PDP77199.1;Name=PDP77199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457584.1;locus_tag=CLI76_05525;product=permease;protein_id=PDP77199.1;transl_table=11 NSLT01000022.1 Genbank gene 15230 15853 . - . ID=gene-CLI76_05530;Name=CLI76_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05530 NSLT01000022.1 Protein Homology CDS 15230 15853 . - 0 ID=cds-PDP77200.1;Parent=gene-CLI76_05530;Dbxref=NCBI_GP:PDP77200.1;Name=PDP77200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002661599.1;locus_tag=CLI76_05530;product=Crp/Fnr family transcriptional regulator;protein_id=PDP77200.1;transl_table=11 NSLT01000022.1 Genbank gene 16975 18531 . + . ID=gene-CLI76_05535;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CLI76_05535 NSLT01000022.1 Protein Homology CDS 16975 18531 . + 0 ID=cds-PDP77201.1;Parent=gene-CLI76_05535;Dbxref=NCBI_GP:PDP77201.1;Name=PDP77201.1;gbkey=CDS;gene=nadB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584081.1;locus_tag=CLI76_05535;product=L-aspartate oxidase;protein_id=PDP77201.1;transl_table=11 NSLT01000022.1 Genbank gene 18563 19405 . + . ID=gene-CLI76_05540;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CLI76_05540 NSLT01000022.1 Protein Homology CDS 18563 19405 . + 0 ID=cds-PDP77202.1;Parent=gene-CLI76_05540;Dbxref=NCBI_GP:PDP77202.1;Name=PDP77202.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874560.1;locus_tag=CLI76_05540;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=PDP77202.1;transl_table=11 NSLT01000022.1 Genbank gene 19425 20351 . + . ID=gene-CLI76_05545;Name=CLI76_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05545 NSLT01000022.1 Protein Homology CDS 19425 20351 . + 0 ID=cds-PDP77203.1;Parent=gene-CLI76_05545;Dbxref=NCBI_GP:PDP77203.1;Name=PDP77203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874622.1;locus_tag=CLI76_05545;product=quinolinate synthase NadA;protein_id=PDP77203.1;transl_table=11 NSLT01000022.1 Genbank gene 20451 21446 . + . ID=gene-CLI76_05550;Name=CLI76_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05550 NSLT01000022.1 Protein Homology CDS 20451 21446 . + 0 ID=cds-PDP77204.1;Parent=gene-CLI76_05550;Dbxref=NCBI_GP:PDP77204.1;Name=PDP77204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008761573.1;locus_tag=CLI76_05550;product=ATPase;protein_id=PDP77204.1;transl_table=11 NSLT01000022.1 Genbank gene 21457 22329 . + . ID=gene-CLI76_05555;Name=CLI76_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05555 NSLT01000022.1 Protein Homology CDS 21457 22329 . + 0 ID=cds-PDP77205.1;Parent=gene-CLI76_05555;Dbxref=NCBI_GP:PDP77205.1;Name=PDP77205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874688.1;locus_tag=CLI76_05555;product=DUF58 domain-containing protein;protein_id=PDP77205.1;transl_table=11 NSLT01000022.1 Genbank gene 22326 23282 . + . ID=gene-CLI76_05560;Name=CLI76_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05560 NSLT01000022.1 Protein Homology CDS 22326 23282 . + 0 ID=cds-PDP77206.1;Parent=gene-CLI76_05560;Dbxref=NCBI_GP:PDP77206.1;Name=PDP77206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584076.1;locus_tag=CLI76_05560;product=hypothetical protein;protein_id=PDP77206.1;transl_table=11 NSLT01000022.1 Genbank gene 23279 24262 . + . ID=gene-CLI76_05565;Name=CLI76_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05565 NSLT01000022.1 Protein Homology CDS 23279 24262 . + 0 ID=cds-PDP77207.1;Parent=gene-CLI76_05565;Dbxref=NCBI_GP:PDP77207.1;Name=PDP77207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874666.1;locus_tag=CLI76_05565;product=VWA domain-containing protein;protein_id=PDP77207.1;transl_table=11 NSLT01000022.1 Genbank gene 24273 25292 . + . ID=gene-CLI76_05570;Name=CLI76_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05570 NSLT01000022.1 Protein Homology CDS 24273 25292 . + 0 ID=cds-PDP77208.1;Parent=gene-CLI76_05570;Dbxref=NCBI_GP:PDP77208.1;Name=PDP77208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584074.1;locus_tag=CLI76_05570;product=aerotolerance regulator BatB;protein_id=PDP77208.1;transl_table=11 NSLT01000022.1 Genbank gene 25289 26032 . + . ID=gene-CLI76_05575;Name=CLI76_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05575 NSLT01000022.1 Protein Homology CDS 25289 26032 . + 0 ID=cds-PDP77209.1;Parent=gene-CLI76_05575;Dbxref=NCBI_GP:PDP77209.1;Name=PDP77209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874607.1;locus_tag=CLI76_05575;product=hypothetical protein;protein_id=PDP77209.1;transl_table=11 NSLT01000022.1 Genbank gene 26213 28015 . + . ID=gene-CLI76_05580;Name=CLI76_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05580 NSLT01000022.1 Protein Homology CDS 26213 28015 . + 0 ID=cds-PDP77210.1;Parent=gene-CLI76_05580;Dbxref=NCBI_GP:PDP77210.1;Name=PDP77210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457576.1;locus_tag=CLI76_05580;product=aerotolerance regulator BatD;protein_id=PDP77210.1;transl_table=11 NSLT01000022.1 Genbank gene 28012 28920 . + . ID=gene-CLI76_05585;Name=CLI76_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05585 NSLT01000022.1 Protein Homology CDS 28012 28920 . + 0 ID=cds-PDP77211.1;Parent=gene-CLI76_05585;Dbxref=NCBI_GP:PDP77211.1;Name=PDP77211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815608.1;locus_tag=CLI76_05585;product=peptide-binding protein;protein_id=PDP77211.1;transl_table=11 NSLT01000022.1 Genbank gene 28941 29657 . + . ID=gene-CLI76_05590;Name=CLI76_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05590 NSLT01000022.1 Protein Homology CDS 28941 29657 . + 0 ID=cds-PDP77212.1;Parent=gene-CLI76_05590;Dbxref=NCBI_GP:PDP77212.1;Name=PDP77212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584070.1;locus_tag=CLI76_05590;product=phosphatase PAP2 family protein;protein_id=PDP77212.1;transl_table=11 NSLT01000022.1 Genbank gene 29673 30440 . - . ID=gene-CLI76_05595;Name=CLI76_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05595 NSLT01000022.1 Protein Homology CDS 29673 30440 . - 0 ID=cds-PDP77213.1;Parent=gene-CLI76_05595;Dbxref=NCBI_GP:PDP77213.1;Name=PDP77213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634496.1;locus_tag=CLI76_05595;product=TIGR00159 family protein;protein_id=PDP77213.1;transl_table=11 NSLT01000022.1 Genbank gene 30500 31345 . - . ID=gene-CLI76_05600;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CLI76_05600 NSLT01000022.1 Protein Homology CDS 30500 31345 . - 0 ID=cds-PDP77214.1;Parent=gene-CLI76_05600;Dbxref=NCBI_GP:PDP77214.1;Name=PDP77214.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874661.1;locus_tag=CLI76_05600;product=dihydropteroate synthase;protein_id=PDP77214.1;transl_table=11 NSLT01000022.1 Genbank gene 31864 31938 . + . ID=gene-CLI76_05605;Name=CLI76_05605;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_05605 NSLT01000022.1 tRNAscan-SE tRNA 31864 31938 . + . ID=rna-CLI76_05605;Parent=gene-CLI76_05605;anticodon=(pos:31896..31898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05605;product=tRNA-His NSLT01000022.1 tRNAscan-SE exon 31864 31938 . + . ID=exon-CLI76_05605-1;Parent=rna-CLI76_05605;anticodon=(pos:31896..31898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05605;product=tRNA-His NSLT01000022.1 Genbank gene 32142 34226 . + . ID=gene-CLI76_05610;Name=CLI76_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05610 NSLT01000022.1 Protein Homology CDS 32142 34226 . + 0 ID=cds-PDP77215.1;Parent=gene-CLI76_05610;Dbxref=NCBI_GP:PDP77215.1;Name=PDP77215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815605.1;locus_tag=CLI76_05610;product=HDIG domain-containing protein;protein_id=PDP77215.1;transl_table=11 NSLT01000022.1 Genbank gene 34274 34834 . + . ID=gene-CLI76_05615;Name=CLI76_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05615 NSLT01000022.1 Protein Homology CDS 34274 34834 . + 0 ID=cds-PDP77216.1;Parent=gene-CLI76_05615;Dbxref=NCBI_GP:PDP77216.1;Name=PDP77216.1;Note=catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965187.1;locus_tag=CLI76_05615;product=shikimate kinase;protein_id=PDP77216.1;transl_table=11 NSLT01000022.1 Genbank pseudogene 34773 34994 . - . ID=gene-CLI76_05620;Name=CLI76_05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05620;pseudo=true NSLT01000022.1 Protein Homology CDS 34773 34994 . - 0 ID=cds-CLI76_05620;Parent=gene-CLI76_05620;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874617.1;locus_tag=CLI76_05620;product=competence protein ComEC;pseudo=true;transl_table=11 NSLT01000022.1 Genbank pseudogene 34989 35087 . + . ID=gene-CLI76_05625;Name=CLI76_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05625;pseudo=true NSLT01000022.1 Protein Homology CDS 34989 35087 . + 0 ID=cds-CLI76_05625;Parent=gene-CLI76_05625;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_05625;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000023.1 1 34347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000023.1 Genbank region 1 34347 . + . ID=NSLT01000023.1:1..34347;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000023.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_05630;Name=CLI76_05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05630;pseudo=true NSLT01000023.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_05630;Parent=gene-CLI76_05630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_05630;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000023.1 Genbank gene 1099 3117 . - . ID=gene-CLI76_05635;Name=CLI76_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05635 NSLT01000023.1 Protein Homology CDS 1099 3117 . - 0 ID=cds-PDP77162.1;Parent=gene-CLI76_05635;Dbxref=NCBI_GP:PDP77162.1;Name=PDP77162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873448.1;locus_tag=CLI76_05635;product=hypothetical protein;protein_id=PDP77162.1;transl_table=11 NSLT01000023.1 Genbank gene 3139 3732 . - . ID=gene-CLI76_05640;Name=CLI76_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05640 NSLT01000023.1 Protein Homology CDS 3139 3732 . - 0 ID=cds-PDP77163.1;Parent=gene-CLI76_05640;Dbxref=NCBI_GP:PDP77163.1;Name=PDP77163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584291.1;locus_tag=CLI76_05640;product=radical SAM protein;protein_id=PDP77163.1;transl_table=11 NSLT01000023.1 Genbank gene 3752 4171 . - . ID=gene-CLI76_05645;Name=CLI76_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05645 NSLT01000023.1 Protein Homology CDS 3752 4171 . - 0 ID=cds-PDP77164.1;Parent=gene-CLI76_05645;Dbxref=NCBI_GP:PDP77164.1;Name=PDP77164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364760.1;locus_tag=CLI76_05645;product=6-carboxytetrahydropterin synthase;protein_id=PDP77164.1;transl_table=11 NSLT01000023.1 Genbank gene 4554 5987 . + . ID=gene-CLI76_05650;Name=CLI76_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05650 NSLT01000023.1 Protein Homology CDS 4554 5987 . + 0 ID=cds-PDP77165.1;Parent=gene-CLI76_05650;Dbxref=NCBI_GP:PDP77165.1;Name=PDP77165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873455.1;locus_tag=CLI76_05650;product=peptidase;protein_id=PDP77165.1;transl_table=11 NSLT01000023.1 Genbank gene 6442 7128 . - . ID=gene-CLI76_05655;Name=CLI76_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05655 NSLT01000023.1 Protein Homology CDS 6442 7128 . - 0 ID=cds-PDP77166.1;Parent=gene-CLI76_05655;Dbxref=NCBI_GP:PDP77166.1;Name=PDP77166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815796.1;locus_tag=CLI76_05655;product=Crp/Fnr family transcriptional regulator;protein_id=PDP77166.1;transl_table=11 NSLT01000023.1 Genbank gene 7145 7501 . - . ID=gene-CLI76_05660;Name=CLI76_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05660 NSLT01000023.1 Protein Homology CDS 7145 7501 . - 0 ID=cds-PDP77167.1;Parent=gene-CLI76_05660;Dbxref=NCBI_GP:PDP77167.1;Name=PDP77167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815795.1;locus_tag=CLI76_05660;product=transcriptional regulator;protein_id=PDP77167.1;transl_table=11 NSLT01000023.1 Genbank gene 7566 8981 . - . ID=gene-CLI76_05665;Name=CLI76_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05665 NSLT01000023.1 Protein Homology CDS 7566 8981 . - 0 ID=cds-PDP77168.1;Parent=gene-CLI76_05665;Dbxref=NCBI_GP:PDP77168.1;Name=PDP77168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584285.1;locus_tag=CLI76_05665;product=ligase;protein_id=PDP77168.1;transl_table=11 NSLT01000023.1 Genbank gene 9023 9910 . - . ID=gene-CLI76_05670;Name=CLI76_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05670 NSLT01000023.1 Protein Homology CDS 9023 9910 . - 0 ID=cds-PDP77169.1;Parent=gene-CLI76_05670;Dbxref=NCBI_GP:PDP77169.1;Name=PDP77169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458166.1;locus_tag=CLI76_05670;product=hypothetical protein;protein_id=PDP77169.1;transl_table=11 NSLT01000023.1 Genbank gene 9926 10804 . - . ID=gene-CLI76_05675;Name=CLI76_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05675 NSLT01000023.1 Protein Homology CDS 9926 10804 . - 0 ID=cds-PDP77170.1;Parent=gene-CLI76_05675;Dbxref=NCBI_GP:PDP77170.1;Name=PDP77170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584283.1;locus_tag=CLI76_05675;product=MCE family protein;protein_id=PDP77170.1;transl_table=11 NSLT01000023.1 Genbank gene 10845 12035 . - . ID=gene-CLI76_05680;Name=CLI76_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05680 NSLT01000023.1 Protein Homology CDS 10845 12035 . - 0 ID=cds-PDP77171.1;Parent=gene-CLI76_05680;Dbxref=NCBI_GP:PDP77171.1;Name=PDP77171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956195.1;locus_tag=CLI76_05680;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP77171.1;transl_table=11 NSLT01000023.1 Genbank gene 12228 12304 . - . ID=gene-CLI76_05685;Name=CLI76_05685;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_05685 NSLT01000023.1 tRNAscan-SE tRNA 12228 12304 . - . ID=rna-CLI76_05685;Parent=gene-CLI76_05685;anticodon=(pos:complement(12268..12270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05685;product=tRNA-Thr NSLT01000023.1 tRNAscan-SE exon 12228 12304 . - . ID=exon-CLI76_05685-1;Parent=rna-CLI76_05685;anticodon=(pos:complement(12268..12270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05685;product=tRNA-Thr NSLT01000023.1 Genbank gene 12623 12826 . - . ID=gene-CLI76_05690;Name=CLI76_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05690 NSLT01000023.1 Protein Homology CDS 12623 12826 . - 0 ID=cds-PDP77172.1;Parent=gene-CLI76_05690;Dbxref=NCBI_GP:PDP77172.1;Name=PDP77172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815790.1;locus_tag=CLI76_05690;product=hypothetical protein;protein_id=PDP77172.1;transl_table=11 NSLT01000023.1 Genbank gene 13128 13334 . - . ID=gene-CLI76_05695;Name=CLI76_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05695 NSLT01000023.1 Protein Homology CDS 13128 13334 . - 0 ID=cds-PDP77173.1;Parent=gene-CLI76_05695;Dbxref=NCBI_GP:PDP77173.1;Name=PDP77173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815789.1;locus_tag=CLI76_05695;product=hypothetical protein;protein_id=PDP77173.1;transl_table=11 NSLT01000023.1 Genbank gene 13381 14313 . + . ID=gene-CLI76_05700;Name=CLI76_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05700 NSLT01000023.1 Protein Homology CDS 13381 14313 . + 0 ID=cds-PDP77174.1;Parent=gene-CLI76_05700;Dbxref=NCBI_GP:PDP77174.1;Name=PDP77174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584281.1;locus_tag=CLI76_05700;product=DNA-binding protein;protein_id=PDP77174.1;transl_table=11 NSLT01000023.1 Genbank gene 14350 16524 . + . ID=gene-CLI76_05705;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CLI76_05705 NSLT01000023.1 Protein Homology CDS 14350 16524 . + 0 ID=cds-PDP77188.1;Parent=gene-CLI76_05705;Dbxref=NCBI_GP:PDP77188.1;Name=PDP77188.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458171.1;locus_tag=CLI76_05705;product=ferrous iron transport protein B;protein_id=PDP77188.1;transl_table=11 NSLT01000023.1 Genbank gene 16561 18207 . + . ID=gene-CLI76_05710;Name=CLI76_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05710 NSLT01000023.1 Protein Homology CDS 16561 18207 . + 0 ID=cds-PDP77175.1;Parent=gene-CLI76_05710;Dbxref=NCBI_GP:PDP77175.1;Name=PDP77175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584279.1;locus_tag=CLI76_05710;product=glycogen synthase;protein_id=PDP77175.1;transl_table=11 NSLT01000023.1 Genbank gene 18276 19229 . + . ID=gene-CLI76_05715;Name=CLI76_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05715 NSLT01000023.1 Protein Homology CDS 18276 19229 . + 0 ID=cds-PDP77176.1;Parent=gene-CLI76_05715;Dbxref=NCBI_GP:PDP77176.1;Name=PDP77176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584278.1;locus_tag=CLI76_05715;product=sodium:proton exchanger;protein_id=PDP77176.1;transl_table=11 NSLT01000023.1 Genbank gene 19250 19714 . + . ID=gene-CLI76_05720;Name=CLI76_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05720 NSLT01000023.1 Protein Homology CDS 19250 19714 . + 0 ID=cds-PDP77177.1;Parent=gene-CLI76_05720;Dbxref=NCBI_GP:PDP77177.1;Name=PDP77177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584277.1;locus_tag=CLI76_05720;product=transcriptional regulator;protein_id=PDP77177.1;transl_table=11 NSLT01000023.1 Genbank gene 20148 21875 . + . ID=gene-CLI76_05725;Name=CLI76_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05725 NSLT01000023.1 Protein Homology CDS 20148 21875 . + 0 ID=cds-PDP77178.1;Parent=gene-CLI76_05725;Dbxref=NCBI_GP:PDP77178.1;Name=PDP77178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458174.1;locus_tag=CLI76_05725;product=arylsulfatase;protein_id=PDP77178.1;transl_table=11 NSLT01000023.1 Genbank gene 22109 24406 . - . ID=gene-CLI76_05730;Name=CLI76_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05730 NSLT01000023.1 Protein Homology CDS 22109 24406 . - 0 ID=cds-PDP77179.1;Parent=gene-CLI76_05730;Dbxref=NCBI_GP:PDP77179.1;Name=PDP77179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873452.1;locus_tag=CLI76_05730;product=ATP-dependent DNA helicase;protein_id=PDP77179.1;transl_table=11 NSLT01000023.1 Genbank gene 24406 25785 . - . ID=gene-CLI76_05735;Name=CLI76_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05735 NSLT01000023.1 Protein Homology CDS 24406 25785 . - 0 ID=cds-PDP77180.1;Parent=gene-CLI76_05735;Dbxref=NCBI_GP:PDP77180.1;Name=PDP77180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584273.1;locus_tag=CLI76_05735;product=SWIM zinc finger family protein;protein_id=PDP77180.1;transl_table=11 NSLT01000023.1 Genbank gene 25811 28714 . - . ID=gene-CLI76_05740;Name=CLI76_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05740 NSLT01000023.1 Protein Homology CDS 25811 28714 . - 0 ID=cds-PDP77181.1;Parent=gene-CLI76_05740;Dbxref=NCBI_GP:PDP77181.1;Name=PDP77181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815782.1;locus_tag=CLI76_05740;product=excinuclease ABC subunit UvrA;protein_id=PDP77181.1;transl_table=11 NSLT01000023.1 Genbank gene 28785 30170 . - . ID=gene-CLI76_05745;Name=CLI76_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05745 NSLT01000023.1 Protein Homology CDS 28785 30170 . - 0 ID=cds-PDP77182.1;Parent=gene-CLI76_05745;Dbxref=NCBI_GP:PDP77182.1;Name=PDP77182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873451.1;locus_tag=CLI76_05745;product=gliding motility protein;protein_id=PDP77182.1;transl_table=11 NSLT01000023.1 Genbank gene 30265 30999 . - . ID=gene-CLI76_05750;Name=CLI76_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05750 NSLT01000023.1 Protein Homology CDS 30265 30999 . - 0 ID=cds-PDP77183.1;Parent=gene-CLI76_05750;Dbxref=NCBI_GP:PDP77183.1;Name=PDP77183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815780.1;locus_tag=CLI76_05750;product=ABC transporter ATP-binding protein;protein_id=PDP77183.1;transl_table=11 NSLT01000023.1 Genbank gene 31018 31764 . - . ID=gene-CLI76_05755;Name=CLI76_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05755 NSLT01000023.1 Protein Homology CDS 31018 31764 . - 0 ID=cds-PDP77184.1;Parent=gene-CLI76_05755;Dbxref=NCBI_GP:PDP77184.1;Name=PDP77184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965389.1;locus_tag=CLI76_05755;product=permease;protein_id=PDP77184.1;transl_table=11 NSLT01000023.1 Genbank gene 31902 32009 . - . ID=gene-CLI76_05760;Name=CLI76_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05760 NSLT01000023.1 Protein Homology CDS 31902 32009 . - 0 ID=cds-PDP77189.1;Parent=gene-CLI76_05760;Dbxref=NCBI_GP:PDP77189.1;Name=PDP77189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874092.1;locus_tag=CLI76_05760;product=DNA methylase;protein_id=PDP77189.1;transl_table=11 NSLT01000023.1 Genbank gene 32059 33144 . - . ID=gene-CLI76_05765;Name=CLI76_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05765 NSLT01000023.1 Protein Homology CDS 32059 33144 . - 0 ID=cds-PDP77185.1;Parent=gene-CLI76_05765;Dbxref=NCBI_GP:PDP77185.1;Name=PDP77185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_05765;product=IS5/IS1182 family transposase;protein_id=PDP77185.1;transl_table=11 NSLT01000023.1 Genbank gene 33249 33428 . - . ID=gene-CLI76_05770;Name=CLI76_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05770 NSLT01000023.1 Protein Homology CDS 33249 33428 . - 0 ID=cds-PDP77186.1;Parent=gene-CLI76_05770;Dbxref=NCBI_GP:PDP77186.1;Name=PDP77186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_05770;product=hypothetical protein;protein_id=PDP77186.1;transl_table=11 NSLT01000023.1 Genbank gene 33558 34347 . - . ID=gene-CLI76_05775;Name=CLI76_05775;end_range=34347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05775;partial=true NSLT01000023.1 Protein Homology CDS 33558 34347 . - 1 ID=cds-PDP77187.1;Parent=gene-CLI76_05775;Dbxref=NCBI_GP:PDP77187.1;Name=PDP77187.1;end_range=34347,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_05775;partial=true;product=IS3 family transposase;protein_id=PDP77187.1;transl_table=11 ##sequence-region NSLT01000024.1 1 32869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000024.1 Genbank region 1 32869 . + . ID=NSLT01000024.1:1..32869;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000024.1 Genbank pseudogene 1 662 . + . ID=gene-CLI76_05780;Name=CLI76_05780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05780;pseudo=true NSLT01000024.1 Protein Homology CDS 1 662 . + 1 ID=cds-CLI76_05780;Parent=gene-CLI76_05780;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_05780;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000024.1 Genbank gene 1158 1709 . + . ID=gene-CLI76_05785;Name=CLI76_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05785 NSLT01000024.1 Protein Homology CDS 1158 1709 . + 0 ID=cds-PDP77132.1;Parent=gene-CLI76_05785;Dbxref=NCBI_GP:PDP77132.1;Name=PDP77132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965454.1;locus_tag=CLI76_05785;product=hypothetical protein;protein_id=PDP77132.1;transl_table=11 NSLT01000024.1 Genbank gene 1716 1901 . + . ID=gene-CLI76_05790;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CLI76_05790 NSLT01000024.1 Protein Homology CDS 1716 1901 . + 0 ID=cds-PDP77133.1;Parent=gene-CLI76_05790;Dbxref=NCBI_GP:PDP77133.1;Name=PDP77133.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002562387.1;locus_tag=CLI76_05790;product=50S ribosomal protein L32;protein_id=PDP77133.1;transl_table=11 NSLT01000024.1 Genbank gene 2081 3088 . + . ID=gene-CLI76_05795;Name=CLI76_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05795 NSLT01000024.1 Protein Homology CDS 2081 3088 . + 0 ID=cds-PDP77134.1;Parent=gene-CLI76_05795;Dbxref=NCBI_GP:PDP77134.1;Name=PDP77134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965455.1;locus_tag=CLI76_05795;product=3-oxoacyl-ACP synthase;protein_id=PDP77134.1;transl_table=11 NSLT01000024.1 Genbank gene 3167 4066 . + . ID=gene-CLI76_05800;Name=CLI76_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05800 NSLT01000024.1 Protein Homology CDS 3167 4066 . + 0 ID=cds-PDP77135.1;Parent=gene-CLI76_05800;Dbxref=NCBI_GP:PDP77135.1;Name=PDP77135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873468.1;locus_tag=CLI76_05800;product=GTPase Era;protein_id=PDP77135.1;transl_table=11 NSLT01000024.1 Genbank gene 4129 5442 . + . ID=gene-CLI76_05805;Name=CLI76_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05805 NSLT01000024.1 Protein Homology CDS 4129 5442 . + 0 ID=cds-PDP77136.1;Parent=gene-CLI76_05805;Dbxref=NCBI_GP:PDP77136.1;Name=PDP77136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013618627.1;locus_tag=CLI76_05805;product=ribosome biogenesis GTPase Der;protein_id=PDP77136.1;transl_table=11 NSLT01000024.1 Genbank gene 5487 8786 . + . ID=gene-CLI76_05810;Name=CLI76_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05810 NSLT01000024.1 Protein Homology CDS 5487 8786 . + 0 ID=cds-PDP77137.1;Parent=gene-CLI76_05810;Dbxref=NCBI_GP:PDP77137.1;Name=PDP77137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584633.1;locus_tag=CLI76_05810;product=hypothetical protein;protein_id=PDP77137.1;transl_table=11 NSLT01000024.1 Genbank gene 8787 9434 . + . ID=gene-CLI76_05815;Name=CLI76_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05815 NSLT01000024.1 Protein Homology CDS 8787 9434 . + 0 ID=cds-PDP77138.1;Parent=gene-CLI76_05815;Dbxref=NCBI_GP:PDP77138.1;Name=PDP77138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584632.1;locus_tag=CLI76_05815;product=polysaccharide deacetylase family protein;protein_id=PDP77138.1;transl_table=11 NSLT01000024.1 Genbank gene 9460 10146 . + . ID=gene-CLI76_05820;Name=CLI76_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05820 NSLT01000024.1 Protein Homology CDS 9460 10146 . + 0 ID=cds-PDP77139.1;Parent=gene-CLI76_05820;Dbxref=NCBI_GP:PDP77139.1;Name=PDP77139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816030.1;locus_tag=CLI76_05820;product=SAM-dependent methyltransferase;protein_id=PDP77139.1;transl_table=11 NSLT01000024.1 Genbank gene 10345 10926 . - . ID=gene-CLI76_05825;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CLI76_05825 NSLT01000024.1 Protein Homology CDS 10345 10926 . - 0 ID=cds-PDP77140.1;Parent=gene-CLI76_05825;Dbxref=NCBI_GP:PDP77140.1;Name=PDP77140.1;gbkey=CDS;gene=xpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584630.1;locus_tag=CLI76_05825;product=xanthine phosphoribosyltransferase;protein_id=PDP77140.1;transl_table=11 NSLT01000024.1 Genbank gene 10963 12300 . - . ID=gene-CLI76_05830;Name=CLI76_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05830 NSLT01000024.1 Protein Homology CDS 10963 12300 . - 0 ID=cds-PDP77141.1;Parent=gene-CLI76_05830;Dbxref=NCBI_GP:PDP77141.1;Name=PDP77141.1;Note=high-affinity transporter for xanthine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873470.1;locus_tag=CLI76_05830;product=xanthine permease XanP;protein_id=PDP77141.1;transl_table=11 NSLT01000024.1 Genbank gene 12462 13133 . - . ID=gene-CLI76_05835;Name=CLI76_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05835 NSLT01000024.1 Protein Homology CDS 12462 13133 . - 0 ID=cds-PDP77142.1;Parent=gene-CLI76_05835;Dbxref=NCBI_GP:PDP77142.1;Name=PDP77142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873476.1;locus_tag=CLI76_05835;product=PorT family protein;protein_id=PDP77142.1;transl_table=11 NSLT01000024.1 Genbank gene 13193 14698 . - . ID=gene-CLI76_05840;Name=CLI76_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05840 NSLT01000024.1 Protein Homology CDS 13193 14698 . - 0 ID=cds-PDP77143.1;Parent=gene-CLI76_05840;Dbxref=NCBI_GP:PDP77143.1;Name=PDP77143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457320.1;locus_tag=CLI76_05840;product=peptidoglycan-binding protein LysM;protein_id=PDP77143.1;transl_table=11 NSLT01000024.1 Genbank gene 14944 15126 . - . ID=gene-CLI76_05845;Name=CLI76_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05845 NSLT01000024.1 Protein Homology CDS 14944 15126 . - 0 ID=cds-PDP77144.1;Parent=gene-CLI76_05845;Dbxref=NCBI_GP:PDP77144.1;Name=PDP77144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873474.1;locus_tag=CLI76_05845;product=integrase;protein_id=PDP77144.1;transl_table=11 NSLT01000024.1 Genbank gene 15221 15901 . - . ID=gene-CLI76_05850;Name=CLI76_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05850 NSLT01000024.1 GeneMarkS+ CDS 15221 15901 . - 0 ID=cds-PDP77145.1;Parent=gene-CLI76_05850;Dbxref=NCBI_GP:PDP77145.1;Name=PDP77145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_05850;product=hypothetical protein;protein_id=PDP77145.1;transl_table=11 NSLT01000024.1 Genbank gene 15891 17258 . - . ID=gene-CLI76_05855;Name=CLI76_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05855 NSLT01000024.1 Protein Homology CDS 15891 17258 . - 0 ID=cds-PDP77146.1;Parent=gene-CLI76_05855;Dbxref=NCBI_GP:PDP77146.1;Name=PDP77146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01640.15;locus_tag=CLI76_05855;product=hypothetical protein;protein_id=PDP77146.1;transl_table=11 NSLT01000024.1 Genbank gene 17396 17602 . - . ID=gene-CLI76_05860;Name=CLI76_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05860 NSLT01000024.1 Protein Homology CDS 17396 17602 . - 0 ID=cds-PDP77147.1;Parent=gene-CLI76_05860;Dbxref=NCBI_GP:PDP77147.1;Name=PDP77147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458655.1;locus_tag=CLI76_05860;product=hypothetical protein;protein_id=PDP77147.1;transl_table=11 NSLT01000024.1 Genbank gene 17909 17984 . + . ID=gene-CLI76_05865;Name=CLI76_05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_05865 NSLT01000024.1 tRNAscan-SE tRNA 17909 17984 . + . ID=rna-CLI76_05865;Parent=gene-CLI76_05865;anticodon=(pos:17942..17944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05865;product=tRNA-Pro NSLT01000024.1 tRNAscan-SE exon 17909 17984 . + . ID=exon-CLI76_05865-1;Parent=rna-CLI76_05865;anticodon=(pos:17942..17944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_05865;product=tRNA-Pro NSLT01000024.1 Genbank gene 18103 18288 . - . ID=gene-CLI76_05870;Name=CLI76_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05870 NSLT01000024.1 Protein Homology CDS 18103 18288 . - 0 ID=cds-PDP77148.1;Parent=gene-CLI76_05870;Dbxref=NCBI_GP:PDP77148.1;Name=PDP77148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874305.1;locus_tag=CLI76_05870;product=hypothetical protein;protein_id=PDP77148.1;transl_table=11 NSLT01000024.1 Genbank gene 18315 19205 . - . ID=gene-CLI76_05875;Name=CLI76_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05875 NSLT01000024.1 Protein Homology CDS 18315 19205 . - 0 ID=cds-PDP77149.1;Parent=gene-CLI76_05875;Dbxref=NCBI_GP:PDP77149.1;Name=PDP77149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457322.1;locus_tag=CLI76_05875;product=TraB/GumN family protein;protein_id=PDP77149.1;transl_table=11 NSLT01000024.1 Genbank gene 19229 19999 . - . ID=gene-CLI76_05880;Name=CLI76_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05880 NSLT01000024.1 Protein Homology CDS 19229 19999 . - 0 ID=cds-PDP77150.1;Parent=gene-CLI76_05880;Dbxref=NCBI_GP:PDP77150.1;Name=PDP77150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965862.1;locus_tag=CLI76_05880;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=PDP77150.1;transl_table=11 NSLT01000024.1 Genbank gene 20346 21347 . + . ID=gene-CLI76_05885;Name=CLI76_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05885 NSLT01000024.1 Protein Homology CDS 20346 21347 . + 0 ID=cds-PDP77151.1;Parent=gene-CLI76_05885;Dbxref=NCBI_GP:PDP77151.1;Name=PDP77151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457324.1;locus_tag=CLI76_05885;product=glutamine cyclotransferase;protein_id=PDP77151.1;transl_table=11 NSLT01000024.1 Genbank gene 21371 21796 . + . ID=gene-CLI76_05890;Name=CLI76_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05890 NSLT01000024.1 Protein Homology CDS 21371 21796 . + 0 ID=cds-PDP77152.1;Parent=gene-CLI76_05890;Dbxref=NCBI_GP:PDP77152.1;Name=PDP77152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965859.1;locus_tag=CLI76_05890;product=Fe-S metabolism protein SufE;protein_id=PDP77152.1;transl_table=11 NSLT01000024.1 Genbank gene 21800 23197 . + . ID=gene-CLI76_05895;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CLI76_05895 NSLT01000024.1 Protein Homology CDS 21800 23197 . + 0 ID=cds-PDP77153.1;Parent=gene-CLI76_05895;Dbxref=NCBI_GP:PDP77153.1;Name=PDP77153.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816022.1;locus_tag=CLI76_05895;product=protoporphyrinogen oxidase;protein_id=PDP77153.1;transl_table=11 NSLT01000024.1 Genbank pseudogene 23826 24022 . - . ID=gene-CLI76_05900;Name=CLI76_05900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05900;pseudo=true NSLT01000024.1 Protein Homology CDS 23826 24022 . - 0 ID=cds-CLI76_05900;Parent=gene-CLI76_05900;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873904.1;locus_tag=CLI76_05900;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000024.1 Genbank gene 24141 25040 . - . ID=gene-CLI76_05905;Name=CLI76_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05905 NSLT01000024.1 Protein Homology CDS 24141 25040 . - 0 ID=cds-PDP77154.1;Parent=gene-CLI76_05905;Dbxref=NCBI_GP:PDP77154.1;Name=PDP77154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874537.1;locus_tag=CLI76_05905;product=AraC family transcriptional regulator;protein_id=PDP77154.1;transl_table=11 NSLT01000024.1 Genbank gene 25037 26188 . - . ID=gene-CLI76_05910;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CLI76_05910 NSLT01000024.1 Protein Homology CDS 25037 26188 . - 0 ID=cds-PDP77155.1;Parent=gene-CLI76_05910;Dbxref=NCBI_GP:PDP77155.1;Name=PDP77155.1;gbkey=CDS;gene=lpxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965953.1;locus_tag=CLI76_05910;product=lipid-A-disaccharide synthase;protein_id=PDP77155.1;transl_table=11 NSLT01000024.1 Genbank gene 26225 26995 . - . ID=gene-CLI76_05915;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CLI76_05915 NSLT01000024.1 Protein Homology CDS 26225 26995 . - 0 ID=cds-PDP77156.1;Parent=gene-CLI76_05915;Dbxref=NCBI_GP:PDP77156.1;Name=PDP77156.1;gbkey=CDS;gene=surE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583692.1;locus_tag=CLI76_05915;product=5'-nucleotidase SurE;protein_id=PDP77156.1;transl_table=11 NSLT01000024.1 Genbank gene 26992 27549 . - . ID=gene-CLI76_05920;Name=CLI76_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05920 NSLT01000024.1 Protein Homology CDS 26992 27549 . - 0 ID=cds-PDP77157.1;Parent=gene-CLI76_05920;Dbxref=NCBI_GP:PDP77157.1;Name=PDP77157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457328.1;locus_tag=CLI76_05920;product=peptidylprolyl isomerase;protein_id=PDP77157.1;transl_table=11 NSLT01000024.1 Genbank gene 27546 29093 . - . ID=gene-CLI76_05925;Name=CLI76_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05925 NSLT01000024.1 Protein Homology CDS 27546 29093 . - 0 ID=cds-PDP77160.1;Parent=gene-CLI76_05925;Dbxref=NCBI_GP:PDP77160.1;Name=PDP77160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583690.1;locus_tag=CLI76_05925;product=glycine--tRNA ligase;protein_id=PDP77160.1;transl_table=11 NSLT01000024.1 Genbank gene 29553 30992 . - . ID=gene-CLI76_05930;Name=CLI76_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05930 NSLT01000024.1 Protein Homology CDS 29553 30992 . - 0 ID=cds-PDP77161.1;Parent=gene-CLI76_05930;Dbxref=NCBI_GP:PDP77161.1;Name=PDP77161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874535.1;locus_tag=CLI76_05930;product=hypothetical protein;protein_id=PDP77161.1;transl_table=11 NSLT01000024.1 Genbank gene 31037 31630 . - . ID=gene-CLI76_05935;Name=CLI76_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05935 NSLT01000024.1 Protein Homology CDS 31037 31630 . - 0 ID=cds-PDP77158.1;Parent=gene-CLI76_05935;Dbxref=NCBI_GP:PDP77158.1;Name=PDP77158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583687.1;locus_tag=CLI76_05935;product=DUF3575 domain-containing protein;protein_id=PDP77158.1;transl_table=11 NSLT01000024.1 Genbank gene 32022 32869 . + . ID=gene-CLI76_05940;Name=CLI76_05940;end_range=32869,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05940;partial=true NSLT01000024.1 Protein Homology CDS 32022 32869 . + 0 ID=cds-PDP77159.1;Parent=gene-CLI76_05940;Dbxref=NCBI_GP:PDP77159.1;Name=PDP77159.1;end_range=32869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_05940;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77159.1;transl_table=11 ##sequence-region NSLT01000025.1 1 32614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000025.1 Genbank region 1 32614 . + . ID=NSLT01000025.1:1..32614;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000025.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_05945;Name=CLI76_05945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_05945;pseudo=true NSLT01000025.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_05945;Parent=gene-CLI76_05945;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_05945;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000025.1 Genbank gene 1012 2871 . + . ID=gene-CLI76_05950;Name=CLI76_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05950 NSLT01000025.1 Protein Homology CDS 1012 2871 . + 0 ID=cds-PDP77108.1;Parent=gene-CLI76_05950;Dbxref=NCBI_GP:PDP77108.1;Name=PDP77108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458348.1;locus_tag=CLI76_05950;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=PDP77108.1;transl_table=11 NSLT01000025.1 Genbank gene 2898 3905 . + . ID=gene-CLI76_05955;Name=CLI76_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05955 NSLT01000025.1 Protein Homology CDS 2898 3905 . + 0 ID=cds-PDP77109.1;Parent=gene-CLI76_05955;Dbxref=NCBI_GP:PDP77109.1;Name=PDP77109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584963.1;locus_tag=CLI76_05955;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=PDP77109.1;transl_table=11 NSLT01000025.1 Genbank gene 4135 5541 . - . ID=gene-CLI76_05960;Name=CLI76_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05960 NSLT01000025.1 Protein Homology CDS 4135 5541 . - 0 ID=cds-PDP77110.1;Parent=gene-CLI76_05960;Dbxref=NCBI_GP:PDP77110.1;Name=PDP77110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816215.1;locus_tag=CLI76_05960;product=SAM-dependent methyltransferase;protein_id=PDP77110.1;transl_table=11 NSLT01000025.1 Genbank gene 5545 6258 . - . ID=gene-CLI76_05965;Name=CLI76_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05965 NSLT01000025.1 Protein Homology CDS 5545 6258 . - 0 ID=cds-PDP77111.1;Parent=gene-CLI76_05965;Dbxref=NCBI_GP:PDP77111.1;Name=PDP77111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965935.1;locus_tag=CLI76_05965;product=SAM-dependent methyltransferase;protein_id=PDP77111.1;transl_table=11 NSLT01000025.1 Genbank gene 6295 7410 . - . ID=gene-CLI76_05970;Name=CLI76_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05970 NSLT01000025.1 Protein Homology CDS 6295 7410 . - 0 ID=cds-PDP77112.1;Parent=gene-CLI76_05970;Dbxref=NCBI_GP:PDP77112.1;Name=PDP77112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584966.1;locus_tag=CLI76_05970;product=hypothetical protein;protein_id=PDP77112.1;transl_table=11 NSLT01000025.1 Genbank gene 7570 8313 . - . ID=gene-CLI76_05975;Name=CLI76_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05975 NSLT01000025.1 Protein Homology CDS 7570 8313 . - 0 ID=cds-PDP77113.1;Parent=gene-CLI76_05975;Dbxref=NCBI_GP:PDP77113.1;Name=PDP77113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584968.1;locus_tag=CLI76_05975;product=capsular biosynthesis protein;protein_id=PDP77113.1;transl_table=11 NSLT01000025.1 Genbank gene 8323 10788 . - . ID=gene-CLI76_05980;Name=CLI76_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05980 NSLT01000025.1 Protein Homology CDS 8323 10788 . - 0 ID=cds-PDP77114.1;Parent=gene-CLI76_05980;Dbxref=NCBI_GP:PDP77114.1;Name=PDP77114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875156.1;locus_tag=CLI76_05980;product=capsule biosynthesis protein CapM;protein_id=PDP77114.1;transl_table=11 NSLT01000025.1 Genbank gene 10795 11601 . - . ID=gene-CLI76_05985;Name=CLI76_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05985 NSLT01000025.1 Protein Homology CDS 10795 11601 . - 0 ID=cds-PDP77115.1;Parent=gene-CLI76_05985;Dbxref=NCBI_GP:PDP77115.1;Name=PDP77115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816221.1;locus_tag=CLI76_05985;product=BexD/CtrA/VexA family polysaccharide export protein;protein_id=PDP77115.1;transl_table=11 NSLT01000025.1 Genbank gene 11778 12725 . + . ID=gene-CLI76_05990;Name=CLI76_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05990 NSLT01000025.1 Protein Homology CDS 11778 12725 . + 0 ID=cds-PDP77116.1;Parent=gene-CLI76_05990;Dbxref=NCBI_GP:PDP77116.1;Name=PDP77116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956019.1;locus_tag=CLI76_05990;product=GLPGLI family protein;protein_id=PDP77116.1;transl_table=11 NSLT01000025.1 Genbank gene 12722 13621 . + . ID=gene-CLI76_05995;Name=CLI76_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_05995 NSLT01000025.1 Protein Homology CDS 12722 13621 . + 0 ID=cds-PDP77117.1;Parent=gene-CLI76_05995;Dbxref=NCBI_GP:PDP77117.1;Name=PDP77117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458340.1;locus_tag=CLI76_05995;product=GLPGLI family protein;protein_id=PDP77117.1;transl_table=11 NSLT01000025.1 Genbank gene 13628 16258 . + . ID=gene-CLI76_06000;Name=CLI76_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06000 NSLT01000025.1 Protein Homology CDS 13628 16258 . + 0 ID=cds-PDP77129.1;Parent=gene-CLI76_06000;Dbxref=NCBI_GP:PDP77129.1;Name=PDP77129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584974.1;locus_tag=CLI76_06000;product=hypothetical protein;protein_id=PDP77129.1;transl_table=11 NSLT01000025.1 Genbank gene 16370 16732 . + . ID=gene-CLI76_06005;Name=CLI76_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06005 NSLT01000025.1 Protein Homology CDS 16370 16732 . + 0 ID=cds-PDP77118.1;Parent=gene-CLI76_06005;Dbxref=NCBI_GP:PDP77118.1;Name=PDP77118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584975.1;locus_tag=CLI76_06005;product=hypothetical protein;protein_id=PDP77118.1;transl_table=11 NSLT01000025.1 Genbank gene 16939 17958 . + . ID=gene-CLI76_06010;Name=CLI76_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06010 NSLT01000025.1 Protein Homology CDS 16939 17958 . + 0 ID=cds-PDP77119.1;Parent=gene-CLI76_06010;Dbxref=NCBI_GP:PDP77119.1;Name=PDP77119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816226.1;locus_tag=CLI76_06010;product=hemagglutinin;protein_id=PDP77119.1;transl_table=11 NSLT01000025.1 Genbank gene 18147 20126 . + . ID=gene-CLI76_06015;Name=CLI76_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06015 NSLT01000025.1 Protein Homology CDS 18147 20126 . + 0 ID=cds-PDP77120.1;Parent=gene-CLI76_06015;Dbxref=NCBI_GP:PDP77120.1;Name=PDP77120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458338.1;locus_tag=CLI76_06015;product=oligopeptide transporter%2C OPT family;protein_id=PDP77120.1;transl_table=11 NSLT01000025.1 Genbank gene 20143 21360 . + . ID=gene-CLI76_06020;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CLI76_06020 NSLT01000025.1 Protein Homology CDS 20143 21360 . + 0 ID=cds-PDP77130.1;Parent=gene-CLI76_06020;Dbxref=NCBI_GP:PDP77130.1;Name=PDP77130.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873392.1;locus_tag=CLI76_06020;product=peptidase T;protein_id=PDP77130.1;transl_table=11 NSLT01000025.1 Genbank gene 21490 22197 . + . ID=gene-CLI76_06025;Name=CLI76_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06025 NSLT01000025.1 Protein Homology CDS 21490 22197 . + 0 ID=cds-PDP77121.1;Parent=gene-CLI76_06025;Dbxref=NCBI_GP:PDP77121.1;Name=PDP77121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873390.1;locus_tag=CLI76_06025;product=thiamine biosynthesis protein ThiF;protein_id=PDP77121.1;transl_table=11 NSLT01000025.1 Genbank gene 22253 22987 . + . ID=gene-CLI76_06030;Name=CLI76_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06030 NSLT01000025.1 Protein Homology CDS 22253 22987 . + 0 ID=cds-PDP77122.1;Parent=gene-CLI76_06030;Dbxref=NCBI_GP:PDP77122.1;Name=PDP77122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816230.1;locus_tag=CLI76_06030;product=pantothenate kinase;protein_id=PDP77122.1;transl_table=11 NSLT01000025.1 Genbank gene 22980 24284 . + . ID=gene-CLI76_06035;Name=CLI76_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06035 NSLT01000025.1 Protein Homology CDS 22980 24284 . + 0 ID=cds-PDP77123.1;Parent=gene-CLI76_06035;Dbxref=NCBI_GP:PDP77123.1;Name=PDP77123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816231.1;locus_tag=CLI76_06035;product=hypothetical protein;protein_id=PDP77123.1;transl_table=11 NSLT01000025.1 Genbank gene 24326 25678 . + . ID=gene-CLI76_06040;Name=CLI76_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06040 NSLT01000025.1 Protein Homology CDS 24326 25678 . + 0 ID=cds-PDP77131.1;Parent=gene-CLI76_06040;Dbxref=NCBI_GP:PDP77131.1;Name=PDP77131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458333.1;locus_tag=CLI76_06040;product=hypothetical protein;protein_id=PDP77131.1;transl_table=11 NSLT01000025.1 Genbank gene 25709 26413 . + . ID=gene-CLI76_06045;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CLI76_06045 NSLT01000025.1 Protein Homology CDS 25709 26413 . + 0 ID=cds-PDP77124.1;Parent=gene-CLI76_06045;Dbxref=NCBI_GP:PDP77124.1;Name=PDP77124.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873389.1;locus_tag=CLI76_06045;product=LPS export ABC transporter periplasmic protein LptC;protein_id=PDP77124.1;transl_table=11 NSLT01000025.1 Genbank gene 26410 27663 . + . ID=gene-CLI76_06050;Name=CLI76_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06050 NSLT01000025.1 Protein Homology CDS 26410 27663 . + 0 ID=cds-PDP77125.1;Parent=gene-CLI76_06050;Dbxref=NCBI_GP:PDP77125.1;Name=PDP77125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584985.1;locus_tag=CLI76_06050;product=HlyC/CorC family transporter;protein_id=PDP77125.1;transl_table=11 NSLT01000025.1 Genbank gene 27770 29917 . + . ID=gene-CLI76_06055;Name=CLI76_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06055 NSLT01000025.1 Protein Homology CDS 27770 29917 . + 0 ID=cds-PDP77126.1;Parent=gene-CLI76_06055;Dbxref=NCBI_GP:PDP77126.1;Name=PDP77126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584986.1;locus_tag=CLI76_06055;product=peptidylprolyl isomerase;protein_id=PDP77126.1;transl_table=11 NSLT01000025.1 Genbank gene 30207 31481 . + . ID=gene-CLI76_06060;Name=CLI76_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06060 NSLT01000025.1 Protein Homology CDS 30207 31481 . + 0 ID=cds-PDP77127.1;Parent=gene-CLI76_06060;Dbxref=NCBI_GP:PDP77127.1;Name=PDP77127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584987.1;locus_tag=CLI76_06060;product=hypothetical protein;protein_id=PDP77127.1;transl_table=11 NSLT01000025.1 Genbank gene 31767 32614 . + . ID=gene-CLI76_06065;Name=CLI76_06065;end_range=32614,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06065;partial=true NSLT01000025.1 Protein Homology CDS 31767 32614 . + 0 ID=cds-PDP77128.1;Parent=gene-CLI76_06065;Dbxref=NCBI_GP:PDP77128.1;Name=PDP77128.1;end_range=32614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_06065;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77128.1;transl_table=11 ##sequence-region NSLT01000026.1 1 31970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000026.1 Genbank region 1 31970 . + . ID=NSLT01000026.1:1..31970;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000026.1 Genbank gene 1 848 . - . ID=gene-CLI76_06070;Name=CLI76_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06070;partial=true;start_range=.,1 NSLT01000026.1 Protein Homology CDS 1 848 . - 0 ID=cds-PDP77106.1;Parent=gene-CLI76_06070;Dbxref=NCBI_GP:PDP77106.1;Name=PDP77106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_06070;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77106.1;start_range=.,1;transl_table=11 NSLT01000026.1 Genbank pseudogene 870 1091 . - . ID=gene-CLI76_06075;Name=CLI76_06075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06075;pseudo=true NSLT01000026.1 Protein Homology CDS 870 1091 . - 0 ID=cds-CLI76_06075;Parent=gene-CLI76_06075;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874352.1;locus_tag=CLI76_06075;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000026.1 Genbank gene 1238 1477 . + . ID=gene-CLI76_06080;Name=CLI76_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06080 NSLT01000026.1 GeneMarkS+ CDS 1238 1477 . + 0 ID=cds-PDP77065.1;Parent=gene-CLI76_06080;Dbxref=NCBI_GP:PDP77065.1;Name=PDP77065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_06080;product=hypothetical protein;protein_id=PDP77065.1;transl_table=11 NSLT01000026.1 Genbank gene 1500 2876 . + . ID=gene-CLI76_06085;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CLI76_06085 NSLT01000026.1 Protein Homology CDS 1500 2876 . + 0 ID=cds-PDP77066.1;Parent=gene-CLI76_06085;Dbxref=NCBI_GP:PDP77066.1;Name=PDP77066.1;gbkey=CDS;gene=tig;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873932.1;locus_tag=CLI76_06085;product=trigger factor;protein_id=PDP77066.1;transl_table=11 NSLT01000026.1 Genbank gene 4117 5538 . - . ID=gene-CLI76_06090;Name=CLI76_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06090 NSLT01000026.1 Protein Homology CDS 4117 5538 . - 0 ID=cds-PDP77067.1;Parent=gene-CLI76_06090;Dbxref=NCBI_GP:PDP77067.1;Name=PDP77067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964706.1;locus_tag=CLI76_06090;product=alpha/beta hydrolase;protein_id=PDP77067.1;transl_table=11 NSLT01000026.1 Genbank gene 5563 9045 . - . ID=gene-CLI76_06095;Name=CLI76_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06095 NSLT01000026.1 Protein Homology CDS 5563 9045 . - 0 ID=cds-PDP77068.1;Parent=gene-CLI76_06095;Dbxref=NCBI_GP:PDP77068.1;Name=PDP77068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458585.1;locus_tag=CLI76_06095;product=hypothetical protein;protein_id=PDP77068.1;transl_table=11 NSLT01000026.1 Genbank gene 9038 9844 . - . ID=gene-CLI76_06100;Name=CLI76_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06100 NSLT01000026.1 Protein Homology CDS 9038 9844 . - 0 ID=cds-PDP77069.1;Parent=gene-CLI76_06100;Dbxref=NCBI_GP:PDP77069.1;Name=PDP77069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964708.1;locus_tag=CLI76_06100;product=metal ABC transporter permease;protein_id=PDP77069.1;transl_table=11 NSLT01000026.1 Genbank gene 9837 10280 . - . ID=gene-CLI76_06105;Name=CLI76_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06105 NSLT01000026.1 Protein Homology CDS 9837 10280 . - 0 ID=cds-PDP77070.1;Parent=gene-CLI76_06105;Dbxref=NCBI_GP:PDP77070.1;Name=PDP77070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583605.1;locus_tag=CLI76_06105;product=phospholipase;protein_id=PDP77070.1;transl_table=11 NSLT01000026.1 Genbank gene 10302 11561 . - . ID=gene-CLI76_06110;Name=CLI76_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06110 NSLT01000026.1 Protein Homology CDS 10302 11561 . - 0 ID=cds-PDP77107.1;Parent=gene-CLI76_06110;Dbxref=NCBI_GP:PDP77107.1;Name=PDP77107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458583.1;locus_tag=CLI76_06110;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=PDP77107.1;transl_table=11 NSLT01000026.1 Genbank gene 11767 13053 . + . ID=gene-CLI76_06115;Name=CLI76_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06115 NSLT01000026.1 Protein Homology CDS 11767 13053 . + 0 ID=cds-PDP77071.1;Parent=gene-CLI76_06115;Dbxref=NCBI_GP:PDP77071.1;Name=PDP77071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815237.1;locus_tag=CLI76_06115;product=hypothetical protein;protein_id=PDP77071.1;transl_table=11 NSLT01000026.1 Genbank gene 13016 13231 . - . ID=gene-CLI76_06120;Name=CLI76_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06120 NSLT01000026.1 Protein Homology CDS 13016 13231 . - 0 ID=cds-PDP77072.1;Parent=gene-CLI76_06120;Dbxref=NCBI_GP:PDP77072.1;Name=PDP77072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_06120;product=hypothetical protein;protein_id=PDP77072.1;transl_table=11 NSLT01000026.1 Genbank gene 13648 14052 . + . ID=gene-CLI76_06125;Name=CLI76_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06125 NSLT01000026.1 Protein Homology CDS 13648 14052 . + 0 ID=cds-PDP77073.1;Parent=gene-CLI76_06125;Dbxref=NCBI_GP:PDP77073.1;Name=PDP77073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853956.1;locus_tag=CLI76_06125;product=30S ribosomal protein S12;protein_id=PDP77073.1;transl_table=11 NSLT01000026.1 Genbank gene 14289 14765 . + . ID=gene-CLI76_06130;Name=CLI76_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06130 NSLT01000026.1 Protein Homology CDS 14289 14765 . + 0 ID=cds-PDP77074.1;Parent=gene-CLI76_06130;Dbxref=NCBI_GP:PDP77074.1;Name=PDP77074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019541343.1;locus_tag=CLI76_06130;product=30S ribosomal protein S7;protein_id=PDP77074.1;transl_table=11 NSLT01000026.1 Genbank gene 14778 16901 . + . ID=gene-CLI76_06135;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CLI76_06135 NSLT01000026.1 Protein Homology CDS 14778 16901 . + 0 ID=cds-PDP77075.1;Parent=gene-CLI76_06135;Dbxref=NCBI_GP:PDP77075.1;Name=PDP77075.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149959.1;locus_tag=CLI76_06135;product=elongation factor G;protein_id=PDP77075.1;transl_table=11 NSLT01000026.1 Genbank gene 16917 17222 . + . ID=gene-CLI76_06140;Name=CLI76_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06140 NSLT01000026.1 Protein Homology CDS 16917 17222 . + 0 ID=cds-PDP77076.1;Parent=gene-CLI76_06140;Dbxref=NCBI_GP:PDP77076.1;Name=PDP77076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782187.1;locus_tag=CLI76_06140;product=30S ribosomal protein S10;protein_id=PDP77076.1;transl_table=11 NSLT01000026.1 Genbank gene 17245 17862 . + . ID=gene-CLI76_06145;Name=CLI76_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06145 NSLT01000026.1 Protein Homology CDS 17245 17862 . + 0 ID=cds-PDP77077.1;Parent=gene-CLI76_06145;Dbxref=NCBI_GP:PDP77077.1;Name=PDP77077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224895.1;locus_tag=CLI76_06145;product=50S ribosomal protein L3;protein_id=PDP77077.1;transl_table=11 NSLT01000026.1 Genbank gene 17862 18491 . + . ID=gene-CLI76_06150;Name=CLI76_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06150 NSLT01000026.1 Protein Homology CDS 17862 18491 . + 0 ID=cds-PDP77078.1;Parent=gene-CLI76_06150;Dbxref=NCBI_GP:PDP77078.1;Name=PDP77078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815235.1;locus_tag=CLI76_06150;product=50S ribosomal protein L4;protein_id=PDP77078.1;transl_table=11 NSLT01000026.1 Genbank gene 18506 18799 . + . ID=gene-CLI76_06155;Name=CLI76_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06155 NSLT01000026.1 Protein Homology CDS 18506 18799 . + 0 ID=cds-PDP77079.1;Parent=gene-CLI76_06155;Dbxref=NCBI_GP:PDP77079.1;Name=PDP77079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224897.1;locus_tag=CLI76_06155;product=50S ribosomal protein L23;protein_id=PDP77079.1;transl_table=11 NSLT01000026.1 Genbank gene 18806 19630 . + . ID=gene-CLI76_06160;Name=CLI76_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06160 NSLT01000026.1 Protein Homology CDS 18806 19630 . + 0 ID=cds-PDP77080.1;Parent=gene-CLI76_06160;Dbxref=NCBI_GP:PDP77080.1;Name=PDP77080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005853970.1;locus_tag=CLI76_06160;product=50S ribosomal protein L2;protein_id=PDP77080.1;transl_table=11 NSLT01000026.1 Genbank gene 19653 19922 . + . ID=gene-CLI76_06165;Name=CLI76_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06165 NSLT01000026.1 Protein Homology CDS 19653 19922 . + 0 ID=cds-PDP77081.1;Parent=gene-CLI76_06165;Dbxref=NCBI_GP:PDP77081.1;Name=PDP77081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007212071.1;locus_tag=CLI76_06165;product=30S ribosomal protein S19;protein_id=PDP77081.1;transl_table=11 NSLT01000026.1 Genbank gene 19977 20381 . + . ID=gene-CLI76_06170;Name=CLI76_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06170 NSLT01000026.1 Protein Homology CDS 19977 20381 . + 0 ID=cds-PDP77082.1;Parent=gene-CLI76_06170;Dbxref=NCBI_GP:PDP77082.1;Name=PDP77082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007559383.1;locus_tag=CLI76_06170;product=50S ribosomal protein L22;protein_id=PDP77082.1;transl_table=11 NSLT01000026.1 Genbank gene 20388 21128 . + . ID=gene-CLI76_06175;Name=CLI76_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06175 NSLT01000026.1 Protein Homology CDS 20388 21128 . + 0 ID=cds-PDP77083.1;Parent=gene-CLI76_06175;Dbxref=NCBI_GP:PDP77083.1;Name=PDP77083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005656540.1;locus_tag=CLI76_06175;product=30S ribosomal protein S3;protein_id=PDP77083.1;transl_table=11 NSLT01000026.1 Genbank gene 21149 21583 . + . ID=gene-CLI76_06180;Name=CLI76_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06180 NSLT01000026.1 Protein Homology CDS 21149 21583 . + 0 ID=cds-PDP77084.1;Parent=gene-CLI76_06180;Dbxref=NCBI_GP:PDP77084.1;Name=PDP77084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016275273.1;locus_tag=CLI76_06180;product=50S ribosomal protein L16;protein_id=PDP77084.1;transl_table=11 NSLT01000026.1 Genbank gene 21589 21783 . + . ID=gene-CLI76_06185;Name=CLI76_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06185 NSLT01000026.1 Protein Homology CDS 21589 21783 . + 0 ID=cds-PDP77085.1;Parent=gene-CLI76_06185;Dbxref=NCBI_GP:PDP77085.1;Name=PDP77085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583590.1;locus_tag=CLI76_06185;product=50S ribosomal protein L29;protein_id=PDP77085.1;transl_table=11 NSLT01000026.1 Genbank gene 21797 22051 . + . ID=gene-CLI76_06190;Name=CLI76_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06190 NSLT01000026.1 Protein Homology CDS 21797 22051 . + 0 ID=cds-PDP77086.1;Parent=gene-CLI76_06190;Dbxref=NCBI_GP:PDP77086.1;Name=PDP77086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016660790.1;locus_tag=CLI76_06190;product=30S ribosomal protein S17;protein_id=PDP77086.1;transl_table=11 NSLT01000026.1 Genbank gene 22053 22418 . + . ID=gene-CLI76_06195;Name=CLI76_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06195 NSLT01000026.1 Protein Homology CDS 22053 22418 . + 0 ID=cds-PDP77087.1;Parent=gene-CLI76_06195;Dbxref=NCBI_GP:PDP77087.1;Name=PDP77087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009318509.1;locus_tag=CLI76_06195;product=50S ribosomal protein L14;protein_id=PDP77087.1;transl_table=11 NSLT01000026.1 Genbank gene 22441 22761 . + . ID=gene-CLI76_06200;Name=CLI76_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06200 NSLT01000026.1 Protein Homology CDS 22441 22761 . + 0 ID=cds-PDP77088.1;Parent=gene-CLI76_06200;Dbxref=NCBI_GP:PDP77088.1;Name=PDP77088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101447.1;locus_tag=CLI76_06200;product=50S ribosomal protein L24;protein_id=PDP77088.1;transl_table=11 NSLT01000026.1 Genbank gene 22761 23321 . + . ID=gene-CLI76_06205;Name=CLI76_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06205 NSLT01000026.1 Protein Homology CDS 22761 23321 . + 0 ID=cds-PDP77089.1;Parent=gene-CLI76_06205;Dbxref=NCBI_GP:PDP77089.1;Name=PDP77089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432221.1;locus_tag=CLI76_06205;product=50S ribosomal protein L5;protein_id=PDP77089.1;transl_table=11 NSLT01000026.1 Genbank gene 23323 23592 . + . ID=gene-CLI76_06210;Name=CLI76_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06210 NSLT01000026.1 Protein Homology CDS 23323 23592 . + 0 ID=cds-PDP77090.1;Parent=gene-CLI76_06210;Dbxref=NCBI_GP:PDP77090.1;Name=PDP77090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010251725.1;locus_tag=CLI76_06210;product=30S ribosomal protein S14;protein_id=PDP77090.1;transl_table=11 NSLT01000026.1 Genbank gene 23643 24038 . + . ID=gene-CLI76_06215;Name=CLI76_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06215 NSLT01000026.1 Protein Homology CDS 23643 24038 . + 0 ID=cds-PDP77091.1;Parent=gene-CLI76_06215;Dbxref=NCBI_GP:PDP77091.1;Name=PDP77091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005782213.1;locus_tag=CLI76_06215;product=30S ribosomal protein S8;protein_id=PDP77091.1;transl_table=11 NSLT01000026.1 Genbank gene 24057 24608 . + . ID=gene-CLI76_06220;Name=CLI76_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06220 NSLT01000026.1 Protein Homology CDS 24057 24608 . + 0 ID=cds-PDP77092.1;Parent=gene-CLI76_06220;Dbxref=NCBI_GP:PDP77092.1;Name=PDP77092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009859534.1;locus_tag=CLI76_06220;product=50S ribosomal protein L6;protein_id=PDP77092.1;transl_table=11 NSLT01000026.1 Genbank gene 24627 24971 . + . ID=gene-CLI76_06225;Name=CLI76_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06225 NSLT01000026.1 Protein Homology CDS 24627 24971 . + 0 ID=cds-PDP77093.1;Parent=gene-CLI76_06225;Dbxref=NCBI_GP:PDP77093.1;Name=PDP77093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634763.1;locus_tag=CLI76_06225;product=50S ribosomal protein L18;protein_id=PDP77093.1;transl_table=11 NSLT01000026.1 Genbank gene 24977 25495 . + . ID=gene-CLI76_06230;Name=CLI76_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06230 NSLT01000026.1 Protein Homology CDS 24977 25495 . + 0 ID=cds-PDP77094.1;Parent=gene-CLI76_06230;Dbxref=NCBI_GP:PDP77094.1;Name=PDP77094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811622.1;locus_tag=CLI76_06230;product=30S ribosomal protein S5;protein_id=PDP77094.1;transl_table=11 NSLT01000026.1 Genbank gene 25515 25691 . + . ID=gene-CLI76_06235;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CLI76_06235 NSLT01000026.1 Protein Homology CDS 25515 25691 . + 0 ID=cds-PDP77095.1;Parent=gene-CLI76_06235;Dbxref=NCBI_GP:PDP77095.1;Name=PDP77095.1;gbkey=CDS;gene=rpmD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101440.1;locus_tag=CLI76_06235;product=50S ribosomal protein L30;protein_id=PDP77095.1;transl_table=11 NSLT01000026.1 Genbank gene 25717 26163 . + . ID=gene-CLI76_06240;Name=CLI76_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06240 NSLT01000026.1 Protein Homology CDS 25717 26163 . + 0 ID=cds-PDP77096.1;Parent=gene-CLI76_06240;Dbxref=NCBI_GP:PDP77096.1;Name=PDP77096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667878.1;locus_tag=CLI76_06240;product=50S ribosomal protein L15;protein_id=PDP77096.1;transl_table=11 NSLT01000026.1 Genbank gene 26168 27508 . + . ID=gene-CLI76_06245;Name=CLI76_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06245 NSLT01000026.1 Protein Homology CDS 26168 27508 . + 0 ID=cds-PDP77097.1;Parent=gene-CLI76_06245;Dbxref=NCBI_GP:PDP77097.1;Name=PDP77097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007365553.1;locus_tag=CLI76_06245;product=preprotein translocase subunit SecY;protein_id=PDP77097.1;transl_table=11 NSLT01000026.1 Genbank gene 27508 28293 . + . ID=gene-CLI76_06250;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CLI76_06250 NSLT01000026.1 Protein Homology CDS 27508 28293 . + 0 ID=cds-PDP77098.1;Parent=gene-CLI76_06250;Dbxref=NCBI_GP:PDP77098.1;Name=PDP77098.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956440.1;locus_tag=CLI76_06250;product=type I methionyl aminopeptidase;protein_id=PDP77098.1;transl_table=11 NSLT01000026.1 Genbank gene 28296 28514 . + . ID=gene-CLI76_06255;Name=CLI76_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06255 NSLT01000026.1 Protein Homology CDS 28296 28514 . + 0 ID=cds-PDP77099.1;Parent=gene-CLI76_06255;Dbxref=NCBI_GP:PDP77099.1;Name=PDP77099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018109212.1;locus_tag=CLI76_06255;product=translation initiation factor IF-1;protein_id=PDP77099.1;transl_table=11 NSLT01000026.1 Genbank gene 28531 28647 . + . ID=gene-CLI76_06260;Name=CLI76_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06260 NSLT01000026.1 Protein Homology CDS 28531 28647 . + 0 ID=cds-PDP77100.1;Parent=gene-CLI76_06260;Dbxref=NCBI_GP:PDP77100.1;Name=PDP77100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=CLI76_06260;product=50S ribosomal protein L36;protein_id=PDP77100.1;transl_table=11 NSLT01000026.1 Genbank gene 28680 29060 . + . ID=gene-CLI76_06265;Name=CLI76_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06265 NSLT01000026.1 Protein Homology CDS 28680 29060 . + 0 ID=cds-PDP77101.1;Parent=gene-CLI76_06265;Dbxref=NCBI_GP:PDP77101.1;Name=PDP77101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1;locus_tag=CLI76_06265;product=30S ribosomal protein S13;protein_id=PDP77101.1;transl_table=11 NSLT01000026.1 Genbank gene 29072 29458 . + . ID=gene-CLI76_06270;Name=CLI76_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06270 NSLT01000026.1 Protein Homology CDS 29072 29458 . + 0 ID=cds-PDP77102.1;Parent=gene-CLI76_06270;Dbxref=NCBI_GP:PDP77102.1;Name=PDP77102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007567382.1;locus_tag=CLI76_06270;product=30S ribosomal protein S11;protein_id=PDP77102.1;transl_table=11 NSLT01000026.1 Genbank gene 29618 30223 . + . ID=gene-CLI76_06275;Name=CLI76_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06275 NSLT01000026.1 Protein Homology CDS 29618 30223 . + 0 ID=cds-PDP77103.1;Parent=gene-CLI76_06275;Dbxref=NCBI_GP:PDP77103.1;Name=PDP77103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018667875.1;locus_tag=CLI76_06275;product=30S ribosomal protein S4;protein_id=PDP77103.1;transl_table=11 NSLT01000026.1 Genbank gene 30236 31228 . + . ID=gene-CLI76_06280;Name=CLI76_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06280 NSLT01000026.1 Protein Homology CDS 30236 31228 . + 0 ID=cds-PDP77104.1;Parent=gene-CLI76_06280;Dbxref=NCBI_GP:PDP77104.1;Name=PDP77104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964728.1;locus_tag=CLI76_06280;product=DNA-directed RNA polymerase subunit alpha;protein_id=PDP77104.1;transl_table=11 NSLT01000026.1 Genbank gene 31234 31716 . + . ID=gene-CLI76_06285;Name=CLI76_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06285 NSLT01000026.1 Protein Homology CDS 31234 31716 . + 0 ID=cds-PDP77105.1;Parent=gene-CLI76_06285;Dbxref=NCBI_GP:PDP77105.1;Name=PDP77105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873882.1;locus_tag=CLI76_06285;product=50S ribosomal protein L17;protein_id=PDP77105.1;transl_table=11 ##sequence-region NSLT01000027.1 1 31040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000027.1 Genbank region 1 31040 . + . ID=NSLT01000027.1:1..31040;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000027.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_06290;Name=CLI76_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06290;pseudo=true NSLT01000027.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_06290;Parent=gene-CLI76_06290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_06290;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000027.1 Genbank gene 543 1115 . - . ID=gene-CLI76_06295;Name=CLI76_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06295 NSLT01000027.1 Protein Homology CDS 543 1115 . - 0 ID=cds-PDP77037.1;Parent=gene-CLI76_06295;Dbxref=NCBI_GP:PDP77037.1;Name=PDP77037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874209.1;locus_tag=CLI76_06295;product=electron transport complex protein RnfA;protein_id=PDP77037.1;transl_table=11 NSLT01000027.1 Genbank gene 1140 1730 . - . ID=gene-CLI76_06300;Name=CLI76_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06300 NSLT01000027.1 Protein Homology CDS 1140 1730 . - 0 ID=cds-PDP77038.1;Parent=gene-CLI76_06300;Dbxref=NCBI_GP:PDP77038.1;Name=PDP77038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584791.1;locus_tag=CLI76_06300;product=electron transport complex subunit RsxE;protein_id=PDP77038.1;transl_table=11 NSLT01000027.1 Genbank gene 1727 2404 . - . ID=gene-CLI76_06305;Name=CLI76_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06305 NSLT01000027.1 Protein Homology CDS 1727 2404 . - 0 ID=cds-PDP77039.1;Parent=gene-CLI76_06305;Dbxref=NCBI_GP:PDP77039.1;Name=PDP77039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874238.1;locus_tag=CLI76_06305;product=electron transporter RnfG;protein_id=PDP77039.1;transl_table=11 NSLT01000027.1 Genbank gene 2401 3384 . - . ID=gene-CLI76_06310;Name=CLI76_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06310 NSLT01000027.1 Protein Homology CDS 2401 3384 . - 0 ID=cds-PDP77040.1;Parent=gene-CLI76_06310;Dbxref=NCBI_GP:PDP77040.1;Name=PDP77040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964239.1;locus_tag=CLI76_06310;product=Na+-transporting NADH:ubiquinone oxidoreductase subunit D;protein_id=PDP77040.1;transl_table=11 NSLT01000027.1 Genbank gene 3400 4731 . - . ID=gene-CLI76_06315;Name=CLI76_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06315 NSLT01000027.1 Protein Homology CDS 3400 4731 . - 0 ID=cds-PDP77041.1;Parent=gene-CLI76_06315;Dbxref=NCBI_GP:PDP77041.1;Name=PDP77041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584788.1;locus_tag=CLI76_06315;product=electron transport complex subunit RsxC;protein_id=PDP77041.1;transl_table=11 NSLT01000027.1 Genbank gene 4767 5639 . - . ID=gene-CLI76_06320;Name=CLI76_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06320 NSLT01000027.1 Protein Homology CDS 4767 5639 . - 0 ID=cds-PDP77042.1;Parent=gene-CLI76_06320;Dbxref=NCBI_GP:PDP77042.1;Name=PDP77042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964241.1;locus_tag=CLI76_06320;product=ferredoxin;protein_id=PDP77042.1;transl_table=11 NSLT01000027.1 Genbank gene 5649 6071 . - . ID=gene-CLI76_06325;Name=CLI76_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06325 NSLT01000027.1 Protein Homology CDS 5649 6071 . - 0 ID=cds-PDP77043.1;Parent=gene-CLI76_06325;Dbxref=NCBI_GP:PDP77043.1;Name=PDP77043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584786.1;locus_tag=CLI76_06325;product=Fis family transcriptional regulator;protein_id=PDP77043.1;transl_table=11 NSLT01000027.1 Genbank gene 6132 6377 . + . ID=gene-CLI76_06330;Name=CLI76_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06330 NSLT01000027.1 GeneMarkS+ CDS 6132 6377 . + 0 ID=cds-PDP77044.1;Parent=gene-CLI76_06330;Dbxref=NCBI_GP:PDP77044.1;Name=PDP77044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_06330;product=hypothetical protein;protein_id=PDP77044.1;transl_table=11 NSLT01000027.1 Genbank gene 6427 7719 . - . ID=gene-CLI76_06335;Name=CLI76_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06335 NSLT01000027.1 Protein Homology CDS 6427 7719 . - 0 ID=cds-PDP77045.1;Parent=gene-CLI76_06335;Dbxref=NCBI_GP:PDP77045.1;Name=PDP77045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458438.1;locus_tag=CLI76_06335;product=hypothetical protein;protein_id=PDP77045.1;transl_table=11 NSLT01000027.1 Genbank gene 8283 8465 . + . ID=gene-CLI76_06340;Name=CLI76_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06340 NSLT01000027.1 Protein Homology CDS 8283 8465 . + 0 ID=cds-PDP77046.1;Parent=gene-CLI76_06340;Dbxref=NCBI_GP:PDP77046.1;Name=PDP77046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816127.1;locus_tag=CLI76_06340;product=hypothetical protein;protein_id=PDP77046.1;transl_table=11 NSLT01000027.1 Genbank gene 8606 8818 . + . ID=gene-CLI76_06345;Name=CLI76_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06345 NSLT01000027.1 Protein Homology CDS 8606 8818 . + 0 ID=cds-PDP77047.1;Parent=gene-CLI76_06345;Dbxref=NCBI_GP:PDP77047.1;Name=PDP77047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816126.1;locus_tag=CLI76_06345;product=hypothetical protein;protein_id=PDP77047.1;transl_table=11 NSLT01000027.1 Genbank gene 9169 12873 . + . ID=gene-CLI76_06350;Name=CLI76_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06350 NSLT01000027.1 Protein Homology CDS 9169 12873 . + 0 ID=cds-PDP77048.1;Parent=gene-CLI76_06350;Dbxref=NCBI_GP:PDP77048.1;Name=PDP77048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458443.1;locus_tag=CLI76_06350;product=phosphoribosylformylglycinamidine synthase;protein_id=PDP77048.1;transl_table=11 NSLT01000027.1 Genbank gene 12866 13990 . + . ID=gene-CLI76_06355;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CLI76_06355 NSLT01000027.1 Protein Homology CDS 12866 13990 . + 0 ID=cds-PDP77049.1;Parent=gene-CLI76_06355;Dbxref=NCBI_GP:PDP77049.1;Name=PDP77049.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965810.1;locus_tag=CLI76_06355;product=DNA-protecting protein DprA;protein_id=PDP77049.1;transl_table=11 NSLT01000027.1 Genbank gene 14006 14896 . + . ID=gene-CLI76_06360;Name=CLI76_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06360 NSLT01000027.1 Protein Homology CDS 14006 14896 . + 0 ID=cds-PDP77050.1;Parent=gene-CLI76_06360;Dbxref=NCBI_GP:PDP77050.1;Name=PDP77050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874157.1;locus_tag=CLI76_06360;product=glycosyl transferase family 2;protein_id=PDP77050.1;transl_table=11 NSLT01000027.1 Genbank pseudogene 14939 15121 . + . ID=gene-CLI76_06365;Name=CLI76_06365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06365;pseudo=true NSLT01000027.1 Protein Homology CDS 14939 15121 . + 0 ID=cds-CLI76_06365;Parent=gene-CLI76_06365;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI76_06365;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000027.1 Genbank gene 15491 16069 . + . ID=gene-CLI76_06370;Name=CLI76_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06370 NSLT01000027.1 Protein Homology CDS 15491 16069 . + 0 ID=cds-PDP77051.1;Parent=gene-CLI76_06370;Dbxref=NCBI_GP:PDP77051.1;Name=PDP77051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874170.1;locus_tag=CLI76_06370;product=peptidoglycan domain protein;protein_id=PDP77051.1;transl_table=11 NSLT01000027.1 Genbank gene 16207 16800 . - . ID=gene-CLI76_06375;Name=CLI76_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06375 NSLT01000027.1 Protein Homology CDS 16207 16800 . - 0 ID=cds-PDP77052.1;Parent=gene-CLI76_06375;Dbxref=NCBI_GP:PDP77052.1;Name=PDP77052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964246.1;locus_tag=CLI76_06375;product=chromate transporter;protein_id=PDP77052.1;transl_table=11 NSLT01000027.1 Genbank gene 16819 17376 . - . ID=gene-CLI76_06380;Name=CLI76_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06380 NSLT01000027.1 Protein Homology CDS 16819 17376 . - 0 ID=cds-PDP77053.1;Parent=gene-CLI76_06380;Dbxref=NCBI_GP:PDP77053.1;Name=PDP77053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874188.1;locus_tag=CLI76_06380;product=chromate transporter;protein_id=PDP77053.1;transl_table=11 NSLT01000027.1 Genbank gene 17570 18649 . - . ID=gene-CLI76_06385;Name=CLI76_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06385 NSLT01000027.1 Protein Homology CDS 17570 18649 . - 0 ID=cds-PDP77054.1;Parent=gene-CLI76_06385;Dbxref=NCBI_GP:PDP77054.1;Name=PDP77054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584767.1;locus_tag=CLI76_06385;product=gliding motility protein GldN;protein_id=PDP77054.1;transl_table=11 NSLT01000027.1 Genbank gene 18658 20208 . - . ID=gene-CLI76_06390;Name=CLI76_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06390 NSLT01000027.1 Protein Homology CDS 18658 20208 . - 0 ID=cds-PDP77055.1;Parent=gene-CLI76_06390;Dbxref=NCBI_GP:PDP77055.1;Name=PDP77055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964249.1;locus_tag=CLI76_06390;product=gliding motility protein GldM;protein_id=PDP77055.1;transl_table=11 NSLT01000027.1 Genbank gene 20212 21141 . - . ID=gene-CLI76_06395;Name=CLI76_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06395 NSLT01000027.1 Protein Homology CDS 20212 21141 . - 0 ID=cds-PDP77056.1;Parent=gene-CLI76_06395;Dbxref=NCBI_GP:PDP77056.1;Name=PDP77056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584765.1;locus_tag=CLI76_06395;product=gliding motility protein GldL;protein_id=PDP77056.1;transl_table=11 NSLT01000027.1 Genbank gene 21182 22657 . - . ID=gene-CLI76_06400;Name=CLI76_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06400 NSLT01000027.1 Protein Homology CDS 21182 22657 . - 0 ID=cds-PDP77057.1;Parent=gene-CLI76_06400;Dbxref=NCBI_GP:PDP77057.1;Name=PDP77057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584764.1;locus_tag=CLI76_06400;product=gliding motility-associated lipoprotein GldK;protein_id=PDP77057.1;transl_table=11 NSLT01000027.1 Genbank gene 22714 23655 . - . ID=gene-CLI76_06405;Name=CLI76_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06405 NSLT01000027.1 Protein Homology CDS 22714 23655 . - 0 ID=cds-PDP77058.1;Parent=gene-CLI76_06405;Dbxref=NCBI_GP:PDP77058.1;Name=PDP77058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964252.1;locus_tag=CLI76_06405;product=hypothetical protein;protein_id=PDP77058.1;transl_table=11 NSLT01000027.1 Genbank gene 23738 23959 . - . ID=gene-CLI76_06410;Name=CLI76_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06410 NSLT01000027.1 Protein Homology CDS 23738 23959 . - 0 ID=cds-PDP77059.1;Parent=gene-CLI76_06410;Dbxref=NCBI_GP:PDP77059.1;Name=PDP77059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019538324.1;locus_tag=CLI76_06410;product=DUF2795 domain-containing protein;protein_id=PDP77059.1;transl_table=11 NSLT01000027.1 Genbank gene 24148 25653 . - . ID=gene-CLI76_06415;Name=CLI76_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06415 NSLT01000027.1 Protein Homology CDS 24148 25653 . - 0 ID=cds-PDP77060.1;Parent=gene-CLI76_06415;Dbxref=NCBI_GP:PDP77060.1;Name=PDP77060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964253.1;locus_tag=CLI76_06415;product=transporter;protein_id=PDP77060.1;transl_table=11 NSLT01000027.1 Genbank gene 25917 27167 . + . ID=gene-CLI76_06420;Name=CLI76_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06420 NSLT01000027.1 Protein Homology CDS 25917 27167 . + 0 ID=cds-PDP77064.1;Parent=gene-CLI76_06420;Dbxref=NCBI_GP:PDP77064.1;Name=PDP77064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874197.1;locus_tag=CLI76_06420;product=RND transporter;protein_id=PDP77064.1;transl_table=11 NSLT01000027.1 Genbank gene 27246 27917 . + . ID=gene-CLI76_06425;Name=CLI76_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06425 NSLT01000027.1 Protein Homology CDS 27246 27917 . + 0 ID=cds-PDP77061.1;Parent=gene-CLI76_06425;Dbxref=NCBI_GP:PDP77061.1;Name=PDP77061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584758.1;locus_tag=CLI76_06425;product=ABC transporter ATP-binding protein;protein_id=PDP77061.1;transl_table=11 NSLT01000027.1 Genbank gene 28138 29514 . + . ID=gene-CLI76_06430;Name=CLI76_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06430 NSLT01000027.1 Protein Homology CDS 28138 29514 . + 0 ID=cds-PDP77062.1;Parent=gene-CLI76_06430;Dbxref=NCBI_GP:PDP77062.1;Name=PDP77062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816113.1;locus_tag=CLI76_06430;product=ABC transporter permease;protein_id=PDP77062.1;transl_table=11 NSLT01000027.1 Genbank gene 29536 30864 . + . ID=gene-CLI76_06435;Name=CLI76_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06435 NSLT01000027.1 Protein Homology CDS 29536 30864 . + 0 ID=cds-PDP77063.1;Parent=gene-CLI76_06435;Dbxref=NCBI_GP:PDP77063.1;Name=PDP77063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964256.1;locus_tag=CLI76_06435;product=ABC transporter permease;protein_id=PDP77063.1;transl_table=11 NSLT01000027.1 Genbank pseudogene 30909 31007 . + . ID=gene-CLI76_06440;Name=CLI76_06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06440;pseudo=true NSLT01000027.1 Protein Homology CDS 30909 31007 . + 0 ID=cds-CLI76_06440;Parent=gene-CLI76_06440;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_06440;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000028.1 1 30278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000028.1 Genbank region 1 30278 . + . ID=NSLT01000028.1:1..30278;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000028.1 Genbank gene 561 3152 . - . ID=gene-CLI76_06445;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CLI76_06445 NSLT01000028.1 Protein Homology CDS 561 3152 . - 0 ID=cds-PDP77016.1;Parent=gene-CLI76_06445;Dbxref=NCBI_GP:PDP77016.1;Name=PDP77016.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964909.1;locus_tag=CLI76_06445;product=chaperone protein ClpB;protein_id=PDP77016.1;transl_table=11 NSLT01000028.1 Genbank gene 3371 3931 . + . ID=gene-CLI76_06450;Name=CLI76_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06450 NSLT01000028.1 Protein Homology CDS 3371 3931 . + 0 ID=cds-PDP77017.1;Parent=gene-CLI76_06450;Dbxref=NCBI_GP:PDP77017.1;Name=PDP77017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964910.1;locus_tag=CLI76_06450;product=flavodoxin;protein_id=PDP77017.1;transl_table=11 NSLT01000028.1 Genbank gene 4622 6031 . - . ID=gene-CLI76_06455;Name=CLI76_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06455 NSLT01000028.1 Protein Homology CDS 4622 6031 . - 0 ID=cds-PDP77018.1;Parent=gene-CLI76_06455;Dbxref=NCBI_GP:PDP77018.1;Name=PDP77018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364796.1;locus_tag=CLI76_06455;product=asparagine--tRNA ligase;protein_id=PDP77018.1;transl_table=11 NSLT01000028.1 Genbank gene 6063 7382 . - . ID=gene-CLI76_06460;Name=CLI76_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06460 NSLT01000028.1 Protein Homology CDS 6063 7382 . - 0 ID=cds-PDP77019.1;Parent=gene-CLI76_06460;Dbxref=NCBI_GP:PDP77019.1;Name=PDP77019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815888.1;locus_tag=CLI76_06460;product=pseudouridine synthase;protein_id=PDP77019.1;transl_table=11 NSLT01000028.1 Genbank gene 7484 8827 . - . ID=gene-CLI76_06465;Name=CLI76_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06465 NSLT01000028.1 Protein Homology CDS 7484 8827 . - 0 ID=cds-PDP77020.1;Parent=gene-CLI76_06465;Dbxref=NCBI_GP:PDP77020.1;Name=PDP77020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815887.1;locus_tag=CLI76_06465;product=adenylosuccinate lyase;protein_id=PDP77020.1;transl_table=11 NSLT01000028.1 Genbank gene 8962 9525 . - . ID=gene-CLI76_06470;Name=CLI76_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06470 NSLT01000028.1 Protein Homology CDS 8962 9525 . - 0 ID=cds-PDP77021.1;Parent=gene-CLI76_06470;Dbxref=NCBI_GP:PDP77021.1;Name=PDP77021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965675.1;locus_tag=CLI76_06470;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP77021.1;transl_table=11 NSLT01000028.1 Genbank gene 9548 10198 . - . ID=gene-CLI76_06475;Name=CLI76_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06475 NSLT01000028.1 Protein Homology CDS 9548 10198 . - 0 ID=cds-PDP77022.1;Parent=gene-CLI76_06475;Dbxref=NCBI_GP:PDP77022.1;Name=PDP77022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965674.1;locus_tag=CLI76_06475;product=hypothetical protein;protein_id=PDP77022.1;transl_table=11 NSLT01000028.1 Genbank gene 10223 11410 . - . ID=gene-CLI76_06480;Name=CLI76_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06480 NSLT01000028.1 Protein Homology CDS 10223 11410 . - 0 ID=cds-PDP77023.1;Parent=gene-CLI76_06480;Dbxref=NCBI_GP:PDP77023.1;Name=PDP77023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815885.1;locus_tag=CLI76_06480;product=uracil permease;protein_id=PDP77023.1;transl_table=11 NSLT01000028.1 Genbank gene 11750 12217 . + . ID=gene-CLI76_06485;Name=CLI76_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06485 NSLT01000028.1 Protein Homology CDS 11750 12217 . + 0 ID=cds-PDP77024.1;Parent=gene-CLI76_06485;Dbxref=NCBI_GP:PDP77024.1;Name=PDP77024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815884.1;locus_tag=CLI76_06485;product=transcriptional regulator;protein_id=PDP77024.1;transl_table=11 NSLT01000028.1 Genbank gene 12264 13646 . + . ID=gene-CLI76_06490;Name=CLI76_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06490 NSLT01000028.1 Protein Homology CDS 12264 13646 . + 0 ID=cds-PDP77025.1;Parent=gene-CLI76_06490;Dbxref=NCBI_GP:PDP77025.1;Name=PDP77025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584402.1;locus_tag=CLI76_06490;product=exodeoxyribonuclease VII large subunit;protein_id=PDP77025.1;transl_table=11 NSLT01000028.1 Genbank gene 13919 16471 . + . ID=gene-CLI76_06495;Name=CLI76_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06495 NSLT01000028.1 Protein Homology CDS 13919 16471 . + 0 ID=cds-PDP77026.1;Parent=gene-CLI76_06495;Dbxref=NCBI_GP:PDP77026.1;Name=PDP77026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331646.1;locus_tag=CLI76_06495;product=ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent;protein_id=PDP77026.1;transl_table=11 NSLT01000028.1 Genbank gene 16670 18844 . + . ID=gene-CLI76_06500;Name=CLI76_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06500 NSLT01000028.1 Protein Homology CDS 16670 18844 . + 0 ID=cds-PDP77027.1;Parent=gene-CLI76_06500;Dbxref=NCBI_GP:PDP77027.1;Name=PDP77027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458121.1;locus_tag=CLI76_06500;product=hypothetical protein;protein_id=PDP77027.1;transl_table=11 NSLT01000028.1 Genbank gene 19402 19674 . - . ID=gene-CLI76_06505;Name=CLI76_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06505 NSLT01000028.1 Protein Homology CDS 19402 19674 . - 0 ID=cds-PDP77035.1;Parent=gene-CLI76_06505;Dbxref=NCBI_GP:PDP77035.1;Name=PDP77035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584397.1;locus_tag=CLI76_06505;product=hypothetical protein;protein_id=PDP77035.1;transl_table=11 NSLT01000028.1 Genbank gene 19705 22335 . + . ID=gene-CLI76_06510;Name=CLI76_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06510 NSLT01000028.1 Protein Homology CDS 19705 22335 . + 0 ID=cds-PDP77028.1;Parent=gene-CLI76_06510;Dbxref=NCBI_GP:PDP77028.1;Name=PDP77028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815878.1;locus_tag=CLI76_06510;product=valine--tRNA ligase;protein_id=PDP77028.1;transl_table=11 NSLT01000028.1 Genbank gene 22364 22816 . + . ID=gene-CLI76_06515;Name=CLI76_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06515 NSLT01000028.1 Protein Homology CDS 22364 22816 . + 0 ID=cds-PDP77029.1;Parent=gene-CLI76_06515;Dbxref=NCBI_GP:PDP77029.1;Name=PDP77029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584395.1;locus_tag=CLI76_06515;product=hypothetical protein;protein_id=PDP77029.1;transl_table=11 NSLT01000028.1 Genbank gene 22877 22949 . + . ID=gene-CLI76_06520;Name=CLI76_06520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_06520 NSLT01000028.1 tRNAscan-SE tRNA 22877 22949 . + . ID=rna-CLI76_06520;Parent=gene-CLI76_06520;anticodon=(pos:22910..22912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_06520;product=tRNA-Thr NSLT01000028.1 tRNAscan-SE exon 22877 22949 . + . ID=exon-CLI76_06520-1;Parent=rna-CLI76_06520;anticodon=(pos:22910..22912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_06520;product=tRNA-Thr NSLT01000028.1 Genbank gene 23143 24084 . + . ID=gene-CLI76_06525;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CLI76_06525 NSLT01000028.1 Protein Homology CDS 23143 24084 . + 0 ID=cds-PDP77030.1;Parent=gene-CLI76_06525;Dbxref=NCBI_GP:PDP77030.1;Name=PDP77030.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815877.1;locus_tag=CLI76_06525;product=thioredoxin-disulfide reductase;protein_id=PDP77030.1;transl_table=11 NSLT01000028.1 Genbank gene 24653 25267 . + . ID=gene-CLI76_06530;Name=CLI76_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06530 NSLT01000028.1 Protein Homology CDS 24653 25267 . + 0 ID=cds-PDP77031.1;Parent=gene-CLI76_06530;Dbxref=NCBI_GP:PDP77031.1;Name=PDP77031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815876.1;locus_tag=CLI76_06530;product=sugar transferase;protein_id=PDP77031.1;transl_table=11 NSLT01000028.1 Genbank gene 25442 27070 . - . ID=gene-CLI76_06535;Name=CLI76_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06535 NSLT01000028.1 Protein Homology CDS 25442 27070 . - 0 ID=cds-PDP77032.1;Parent=gene-CLI76_06535;Dbxref=NCBI_GP:PDP77032.1;Name=PDP77032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873629.1;locus_tag=CLI76_06535;product=asparagine synthase;protein_id=PDP77032.1;transl_table=11 NSLT01000028.1 Genbank gene 27033 28340 . - . ID=gene-CLI76_06540;Name=CLI76_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06540 NSLT01000028.1 Protein Homology CDS 27033 28340 . - 0 ID=cds-PDP77033.1;Parent=gene-CLI76_06540;Dbxref=NCBI_GP:PDP77033.1;Name=PDP77033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584391.1;locus_tag=CLI76_06540;product=polysaccharide biosynthesis protein;protein_id=PDP77033.1;transl_table=11 NSLT01000028.1 Genbank gene 28337 29461 . - . ID=gene-CLI76_06545;Name=CLI76_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06545 NSLT01000028.1 Protein Homology CDS 28337 29461 . - 0 ID=cds-PDP77034.1;Parent=gene-CLI76_06545;Dbxref=NCBI_GP:PDP77034.1;Name=PDP77034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584390.1;locus_tag=CLI76_06545;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=PDP77034.1;transl_table=11 NSLT01000028.1 Genbank gene 29671 30278 . - . ID=gene-CLI76_06550;Name=CLI76_06550;end_range=30278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06550;partial=true NSLT01000028.1 Protein Homology CDS 29671 30278 . - 2 ID=cds-PDP77036.1;Parent=gene-CLI76_06550;Dbxref=NCBI_GP:PDP77036.1;Name=PDP77036.1;end_range=30278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458128.1;locus_tag=CLI76_06550;partial=true;product=antioxidant%2C AhpC/TSA family protein;protein_id=PDP77036.1;transl_table=11 ##sequence-region NSLT01000029.1 1 29856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000029.1 Genbank region 1 29856 . + . ID=NSLT01000029.1:1..29856;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000029.1 Genbank gene 1 195 . + . ID=gene-CLI76_06555;Name=CLI76_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06555;partial=true;start_range=.,1 NSLT01000029.1 Protein Homology CDS 1 195 . + 0 ID=cds-PDP76994.1;Parent=gene-CLI76_06555;Dbxref=NCBI_GP:PDP76994.1;Name=PDP76994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_06555;partial=true;product=IS3 family transposase;protein_id=PDP76994.1;start_range=.,1;transl_table=11 NSLT01000029.1 Genbank gene 457 930 . + . ID=gene-CLI76_06560;Name=CLI76_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06560 NSLT01000029.1 Protein Homology CDS 457 930 . + 0 ID=cds-PDP76995.1;Parent=gene-CLI76_06560;Dbxref=NCBI_GP:PDP76995.1;Name=PDP76995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964351.1;locus_tag=CLI76_06560;product=PaaI family thioesterase;protein_id=PDP76995.1;transl_table=11 NSLT01000029.1 Genbank gene 1041 1625 . - . ID=gene-CLI76_06565;Name=CLI76_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06565 NSLT01000029.1 Protein Homology CDS 1041 1625 . - 0 ID=cds-PDP77014.1;Parent=gene-CLI76_06565;Dbxref=NCBI_GP:PDP77014.1;Name=PDP77014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815801.1;locus_tag=CLI76_06565;product=hypothetical protein;protein_id=PDP77014.1;transl_table=11 NSLT01000029.1 Genbank gene 1631 2998 . - . ID=gene-CLI76_06570;Name=CLI76_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06570 NSLT01000029.1 Protein Homology CDS 1631 2998 . - 0 ID=cds-PDP76996.1;Parent=gene-CLI76_06570;Dbxref=NCBI_GP:PDP76996.1;Name=PDP76996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458157.1;locus_tag=CLI76_06570;product=4Fe-4S ferredoxin;protein_id=PDP76996.1;transl_table=11 NSLT01000029.1 Genbank gene 2995 3816 . - . ID=gene-CLI76_06575;Name=CLI76_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06575 NSLT01000029.1 Protein Homology CDS 2995 3816 . - 0 ID=cds-PDP76997.1;Parent=gene-CLI76_06575;Dbxref=NCBI_GP:PDP76997.1;Name=PDP76997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815803.1;locus_tag=CLI76_06575;product=Fe-S oxidoreductase;protein_id=PDP76997.1;transl_table=11 NSLT01000029.1 Genbank gene 4056 4928 . - . ID=gene-CLI76_06580;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CLI76_06580 NSLT01000029.1 Protein Homology CDS 4056 4928 . - 0 ID=cds-PDP76998.1;Parent=gene-CLI76_06580;Dbxref=NCBI_GP:PDP76998.1;Name=PDP76998.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458155.1;locus_tag=CLI76_06580;product=phosphoserine phosphatase SerB;protein_id=PDP76998.1;transl_table=11 NSLT01000029.1 Genbank pseudogene 5291 5494 . + . ID=gene-CLI76_06585;Name=CLI76_06585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06585;pseudo=true NSLT01000029.1 Protein Homology CDS 5291 5494 . + 0 ID=cds-CLI76_06585;Parent=gene-CLI76_06585;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816667.1;locus_tag=CLI76_06585;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000029.1 Genbank gene 5920 6636 . + . ID=gene-CLI76_06590;Name=CLI76_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06590 NSLT01000029.1 Protein Homology CDS 5920 6636 . + 0 ID=cds-PDP76999.1;Parent=gene-CLI76_06590;Dbxref=NCBI_GP:PDP76999.1;Name=PDP76999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458152.1;locus_tag=CLI76_06590;product=hypothetical protein;protein_id=PDP76999.1;transl_table=11 NSLT01000029.1 Genbank pseudogene 6633 10039 . + . ID=gene-CLI76_06595;Name=CLI76_06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06595;pseudo=true NSLT01000029.1 Protein Homology CDS 6633 10039 . + 0 ID=cds-CLI76_06595;Parent=gene-CLI76_06595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458151.1;locus_tag=CLI76_06595;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000029.1 Genbank direct_repeat 10047 10214 . + . ID=id-NSLT01000029.1:10047..10214;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=10047..10082;rpt_unit_seq=gttgggaatacccttagttagaagggtggagacaac NSLT01000029.1 Genbank gene 10418 11737 . + . ID=gene-CLI76_06600;Name=CLI76_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06600 NSLT01000029.1 Protein Homology CDS 10418 11737 . + 0 ID=cds-PDP77000.1;Parent=gene-CLI76_06600;Dbxref=NCBI_GP:PDP77000.1;Name=PDP77000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815852.1;locus_tag=CLI76_06600;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=PDP77000.1;transl_table=11 NSLT01000029.1 Genbank gene 11760 12326 . + . ID=gene-CLI76_06605;Name=CLI76_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06605 NSLT01000029.1 Protein Homology CDS 11760 12326 . + 0 ID=cds-PDP77001.1;Parent=gene-CLI76_06605;Dbxref=NCBI_GP:PDP77001.1;Name=PDP77001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458149.1;locus_tag=CLI76_06605;product=ATP:cob(I)alamin adenosyltransferase;protein_id=PDP77001.1;transl_table=11 NSLT01000029.1 Genbank gene 12323 13819 . + . ID=gene-CLI76_06610;Name=CLI76_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06610 NSLT01000029.1 Protein Homology CDS 12323 13819 . + 0 ID=cds-PDP77002.1;Parent=gene-CLI76_06610;Dbxref=NCBI_GP:PDP77002.1;Name=PDP77002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815854.1;locus_tag=CLI76_06610;product=cobyric acid synthase CobQ;protein_id=PDP77002.1;transl_table=11 NSLT01000029.1 Genbank gene 13812 14819 . + . ID=gene-CLI76_06615;Name=CLI76_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06615 NSLT01000029.1 Protein Homology CDS 13812 14819 . + 0 ID=cds-PDP77003.1;Parent=gene-CLI76_06615;Dbxref=NCBI_GP:PDP77003.1;Name=PDP77003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873516.1;locus_tag=CLI76_06615;product=threonine-phosphate decarboxylase;protein_id=PDP77003.1;transl_table=11 NSLT01000029.1 Genbank gene 14833 15843 . + . ID=gene-CLI76_06620;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CLI76_06620 NSLT01000029.1 Protein Homology CDS 14833 15843 . + 0 ID=cds-PDP77004.1;Parent=gene-CLI76_06620;Dbxref=NCBI_GP:PDP77004.1;Name=PDP77004.1;gbkey=CDS;gene=cobD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956235.1;locus_tag=CLI76_06620;product=cobalamin biosynthesis protein CobD;protein_id=PDP77004.1;transl_table=11 NSLT01000029.1 Genbank pseudogene 16316 16530 . - . ID=gene-CLI76_06625;Name=CLI76_06625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06625;pseudo=true NSLT01000029.1 Protein Homology CDS 16316 16530 . - 0 ID=cds-CLI76_06625;Parent=gene-CLI76_06625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816655.1;locus_tag=CLI76_06625;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000029.1 Genbank gene 16647 17099 . - . ID=gene-CLI76_06630;Name=CLI76_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06630 NSLT01000029.1 Protein Homology CDS 16647 17099 . - 0 ID=cds-PDP77005.1;Parent=gene-CLI76_06630;Dbxref=NCBI_GP:PDP77005.1;Name=PDP77005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458144.1;locus_tag=CLI76_06630;product=hypothetical protein;protein_id=PDP77005.1;transl_table=11 NSLT01000029.1 Genbank gene 17083 18138 . - . ID=gene-CLI76_06635;Name=CLI76_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06635 NSLT01000029.1 Protein Homology CDS 17083 18138 . - 0 ID=cds-PDP77006.1;Parent=gene-CLI76_06635;Dbxref=NCBI_GP:PDP77006.1;Name=PDP77006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584373.1;locus_tag=CLI76_06635;product=glycosyltransferase family 9 protein;protein_id=PDP77006.1;transl_table=11 NSLT01000029.1 Genbank gene 18222 18827 . - . ID=gene-CLI76_06640;Name=CLI76_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06640 NSLT01000029.1 Protein Homology CDS 18222 18827 . - 0 ID=cds-PDP77007.1;Parent=gene-CLI76_06640;Dbxref=NCBI_GP:PDP77007.1;Name=PDP77007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007756356.1;locus_tag=CLI76_06640;product=DUF4254 domain-containing protein;protein_id=PDP77007.1;transl_table=11 NSLT01000029.1 Genbank gene 18987 19403 . - . ID=gene-CLI76_06645;Name=CLI76_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06645 NSLT01000029.1 Protein Homology CDS 18987 19403 . - 0 ID=cds-PDP77008.1;Parent=gene-CLI76_06645;Dbxref=NCBI_GP:PDP77008.1;Name=PDP77008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584375.1;locus_tag=CLI76_06645;product=hypothetical protein;protein_id=PDP77008.1;transl_table=11 NSLT01000029.1 Genbank gene 19542 20690 . - . ID=gene-CLI76_06650;Name=CLI76_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06650 NSLT01000029.1 Protein Homology CDS 19542 20690 . - 0 ID=cds-PDP77015.1;Parent=gene-CLI76_06650;Dbxref=NCBI_GP:PDP77015.1;Name=PDP77015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965649.1;locus_tag=CLI76_06650;product=NADH-dependent alcohol dehydrogenase;protein_id=PDP77015.1;transl_table=11 NSLT01000029.1 Genbank gene 20914 22041 . - . ID=gene-CLI76_06655;Name=CLI76_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06655 NSLT01000029.1 Protein Homology CDS 20914 22041 . - 0 ID=cds-PDP77009.1;Parent=gene-CLI76_06655;Dbxref=NCBI_GP:PDP77009.1;Name=PDP77009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873664.1;locus_tag=CLI76_06655;product=glycosyl transferase;protein_id=PDP77009.1;transl_table=11 NSLT01000029.1 Genbank pseudogene 22161 22378 . - . ID=gene-CLI76_06660;Name=CLI76_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06660;pseudo=true NSLT01000029.1 Protein Homology CDS 22161 22378 . - 0 ID=cds-CLI76_06660;Parent=gene-CLI76_06660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815859.1;locus_tag=CLI76_06660;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000029.1 Genbank gene 23444 25270 . + . ID=gene-CLI76_06665;Name=CLI76_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06665 NSLT01000029.1 Protein Homology CDS 23444 25270 . + 0 ID=cds-PDP77010.1;Parent=gene-CLI76_06665;Dbxref=NCBI_GP:PDP77010.1;Name=PDP77010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815866.1;locus_tag=CLI76_06665;product=long-chain fatty acid--CoA ligase;protein_id=PDP77010.1;transl_table=11 NSLT01000029.1 Genbank pseudogene 25394 26510 . + . ID=gene-CLI76_06670;Name=CLI76_06670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06670;pseudo=true NSLT01000029.1 Protein Homology CDS 25394 26510 . + 0 ID=cds-CLI76_06670;Parent=gene-CLI76_06670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007559958.1;locus_tag=CLI76_06670;product=peptide chain release factor 2;pseudo=true;transl_table=11 NSLT01000029.1 Genbank gene 26783 28117 . + . ID=gene-CLI76_06675;Name=CLI76_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06675 NSLT01000029.1 Protein Homology CDS 26783 28117 . + 0 ID=cds-PDP77011.1;Parent=gene-CLI76_06675;Dbxref=NCBI_GP:PDP77011.1;Name=PDP77011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965657.1;locus_tag=CLI76_06675;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=PDP77011.1;transl_table=11 NSLT01000029.1 Genbank gene 28124 29167 . + . ID=gene-CLI76_06680;Name=CLI76_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06680 NSLT01000029.1 Protein Homology CDS 28124 29167 . + 0 ID=cds-PDP77012.1;Parent=gene-CLI76_06680;Dbxref=NCBI_GP:PDP77012.1;Name=PDP77012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584386.1;locus_tag=CLI76_06680;product=EpsG family protein;protein_id=PDP77012.1;transl_table=11 NSLT01000029.1 Genbank gene 29359 29856 . + . ID=gene-CLI76_06685;Name=CLI76_06685;end_range=29856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06685;partial=true NSLT01000029.1 Protein Homology CDS 29359 29856 . + 0 ID=cds-PDP77013.1;Parent=gene-CLI76_06685;Dbxref=NCBI_GP:PDP77013.1;Name=PDP77013.1;end_range=29856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458130.1;locus_tag=CLI76_06685;partial=true;product=glycosyl transferase;protein_id=PDP77013.1;transl_table=11 ##sequence-region NSLT01000002.1 1 89218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000002.1 Genbank region 1 89218 . + . ID=NSLT01000002.1:1..89218;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000002.1 Genbank gene 208 281 . - . ID=gene-CLI76_00480;Name=CLI76_00480;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00480 NSLT01000002.1 tRNAscan-SE tRNA 208 281 . - . ID=rna-CLI76_00480;Parent=gene-CLI76_00480;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00480;product=tRNA-Gln NSLT01000002.1 tRNAscan-SE exon 208 281 . - . ID=exon-CLI76_00480-1;Parent=rna-CLI76_00480;anticodon=(pos:complement(247..249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00480;product=tRNA-Gln NSLT01000002.1 Genbank gene 708 1250 . + . ID=gene-CLI76_00485;Name=CLI76_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00485 NSLT01000002.1 Protein Homology CDS 708 1250 . + 0 ID=cds-PDP78130.1;Parent=gene-CLI76_00485;Dbxref=NCBI_GP:PDP78130.1;Name=PDP78130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965303.1;locus_tag=CLI76_00485;product=TrmH family RNA methyltransferase;protein_id=PDP78130.1;transl_table=11 NSLT01000002.1 Genbank gene 1353 1841 . - . ID=gene-CLI76_00490;Name=CLI76_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00490 NSLT01000002.1 Protein Homology CDS 1353 1841 . - 0 ID=cds-PDP78069.1;Parent=gene-CLI76_00490;Dbxref=NCBI_GP:PDP78069.1;Name=PDP78069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583426.1;locus_tag=CLI76_00490;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=PDP78069.1;transl_table=11 NSLT01000002.1 Genbank gene 1848 3023 . - . ID=gene-CLI76_00495;Name=CLI76_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00495 NSLT01000002.1 Protein Homology CDS 1848 3023 . - 0 ID=cds-PDP78070.1;Parent=gene-CLI76_00495;Dbxref=NCBI_GP:PDP78070.1;Name=PDP78070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583425.1;locus_tag=CLI76_00495;product=hypothetical protein;protein_id=PDP78070.1;transl_table=11 NSLT01000002.1 Genbank gene 3099 6575 . - . ID=gene-CLI76_00500;Name=CLI76_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00500 NSLT01000002.1 Protein Homology CDS 3099 6575 . - 0 ID=cds-PDP78071.1;Parent=gene-CLI76_00500;Dbxref=NCBI_GP:PDP78071.1;Name=PDP78071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965300.1;locus_tag=CLI76_00500;product=peptidase C25;protein_id=PDP78071.1;transl_table=11 NSLT01000002.1 Genbank gene 6588 7247 . - . ID=gene-CLI76_00505;Name=CLI76_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00505 NSLT01000002.1 Protein Homology CDS 6588 7247 . - 0 ID=cds-PDP78072.1;Parent=gene-CLI76_00505;Dbxref=NCBI_GP:PDP78072.1;Name=PDP78072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965299.1;locus_tag=CLI76_00505;product=FAA hydrolase family protein;protein_id=PDP78072.1;transl_table=11 NSLT01000002.1 Genbank gene 7316 7972 . - . ID=gene-CLI76_00510;Name=CLI76_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00510 NSLT01000002.1 Protein Homology CDS 7316 7972 . - 0 ID=cds-PDP78073.1;Parent=gene-CLI76_00510;Dbxref=NCBI_GP:PDP78073.1;Name=PDP78073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965298.1;locus_tag=CLI76_00510;product=transcriptional regulator;protein_id=PDP78073.1;transl_table=11 NSLT01000002.1 Genbank gene 9236 10723 . + . ID=gene-CLI76_00515;Name=CLI76_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00515 NSLT01000002.1 Protein Homology CDS 9236 10723 . + 0 ID=cds-PDP78074.1;Parent=gene-CLI76_00515;Dbxref=NCBI_GP:PDP78074.1;Name=PDP78074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018056225.1;locus_tag=CLI76_00515;product=hypothetical protein;protein_id=PDP78074.1;transl_table=11 NSLT01000002.1 Genbank gene 11020 12696 . + . ID=gene-CLI76_00520;Name=CLI76_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00520 NSLT01000002.1 Protein Homology CDS 11020 12696 . + 0 ID=cds-PDP78075.1;Parent=gene-CLI76_00520;Dbxref=NCBI_GP:PDP78075.1;Name=PDP78075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874466.1;locus_tag=CLI76_00520;product=sodium-independent anion transporter;protein_id=PDP78075.1;transl_table=11 NSLT01000002.1 Genbank gene 12693 13694 . + . ID=gene-CLI76_00525;Name=CLI76_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00525 NSLT01000002.1 Protein Homology CDS 12693 13694 . + 0 ID=cds-PDP78076.1;Parent=gene-CLI76_00525;Dbxref=NCBI_GP:PDP78076.1;Name=PDP78076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965294.1;locus_tag=CLI76_00525;product=tRNA dihydrouridine synthase DusB;protein_id=PDP78076.1;transl_table=11 NSLT01000002.1 Genbank gene 13680 14384 . - . ID=gene-CLI76_00530;Name=CLI76_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00530 NSLT01000002.1 Protein Homology CDS 13680 14384 . - 0 ID=cds-PDP78077.1;Parent=gene-CLI76_00530;Dbxref=NCBI_GP:PDP78077.1;Name=PDP78077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874470.1;locus_tag=CLI76_00530;product=MarR family transcriptional regulator;protein_id=PDP78077.1;transl_table=11 NSLT01000002.1 Genbank gene 14469 16649 . - . ID=gene-CLI76_00535;Name=CLI76_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00535 NSLT01000002.1 Protein Homology CDS 14469 16649 . - 0 ID=cds-PDP78131.1;Parent=gene-CLI76_00535;Dbxref=NCBI_GP:PDP78131.1;Name=PDP78131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583417.1;locus_tag=CLI76_00535;product=hypothetical protein;protein_id=PDP78131.1;transl_table=11 NSLT01000002.1 Genbank gene 16719 18056 . - . ID=gene-CLI76_00540;Name=CLI76_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00540 NSLT01000002.1 Protein Homology CDS 16719 18056 . - 0 ID=cds-PDP78078.1;Parent=gene-CLI76_00540;Dbxref=NCBI_GP:PDP78078.1;Name=PDP78078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965291.1;locus_tag=CLI76_00540;product=ATP-binding protein;protein_id=PDP78078.1;transl_table=11 NSLT01000002.1 Genbank gene 18067 19416 . - . ID=gene-CLI76_00545;Name=CLI76_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00545 NSLT01000002.1 Protein Homology CDS 18067 19416 . - 0 ID=cds-PDP78079.1;Parent=gene-CLI76_00545;Dbxref=NCBI_GP:PDP78079.1;Name=PDP78079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873898.1;locus_tag=CLI76_00545;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=PDP78079.1;transl_table=11 NSLT01000002.1 Genbank pseudogene 19905 20109 . - . ID=gene-CLI76_00550;Name=CLI76_00550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00550;pseudo=true NSLT01000002.1 Protein Homology CDS 19905 20109 . - 0 ID=cds-CLI76_00550;Parent=gene-CLI76_00550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018360274.1;locus_tag=CLI76_00550;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000002.1 Genbank gene 20263 21033 . - . ID=gene-CLI76_00555;Name=CLI76_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00555 NSLT01000002.1 Protein Homology CDS 20263 21033 . - 0 ID=cds-PDP78080.1;Parent=gene-CLI76_00555;Dbxref=NCBI_GP:PDP78080.1;Name=PDP78080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965273.1;locus_tag=CLI76_00555;product=2-phosphosulfolactate phosphatase;protein_id=PDP78080.1;transl_table=11 NSLT01000002.1 Genbank gene 21043 22071 . - . ID=gene-CLI76_00560;Name=CLI76_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00560 NSLT01000002.1 Protein Homology CDS 21043 22071 . - 0 ID=cds-PDP78081.1;Parent=gene-CLI76_00560;Dbxref=NCBI_GP:PDP78081.1;Name=PDP78081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457167.1;locus_tag=CLI76_00560;product=L-threonine-O-3-phosphate decarboxylase;protein_id=PDP78081.1;transl_table=11 NSLT01000002.1 Genbank gene 22119 25130 . - . ID=gene-CLI76_00565;Name=CLI76_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00565 NSLT01000002.1 Protein Homology CDS 22119 25130 . - 0 ID=cds-PDP78082.1;Parent=gene-CLI76_00565;Dbxref=NCBI_GP:PDP78082.1;Name=PDP78082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457166.1;locus_tag=CLI76_00565;product=glycosyl hydrolase;protein_id=PDP78082.1;transl_table=11 NSLT01000002.1 Genbank gene 25270 27849 . - . ID=gene-CLI76_00570;Name=CLI76_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00570 NSLT01000002.1 Protein Homology CDS 25270 27849 . - 0 ID=cds-PDP78083.1;Parent=gene-CLI76_00570;Dbxref=NCBI_GP:PDP78083.1;Name=PDP78083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873897.1;locus_tag=CLI76_00570;product=Clp protease ClpC;protein_id=PDP78083.1;transl_table=11 NSLT01000002.1 Genbank gene 27996 28292 . - . ID=gene-CLI76_00575;Name=CLI76_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00575 NSLT01000002.1 GeneMarkS+ CDS 27996 28292 . - 0 ID=cds-PDP78084.1;Parent=gene-CLI76_00575;Dbxref=NCBI_GP:PDP78084.1;Name=PDP78084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_00575;product=hypothetical protein;protein_id=PDP78084.1;transl_table=11 NSLT01000002.1 Genbank gene 28477 28550 . + . ID=gene-CLI76_00580;Name=CLI76_00580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00580 NSLT01000002.1 tRNAscan-SE tRNA 28477 28550 . + . ID=rna-CLI76_00580;Parent=gene-CLI76_00580;anticodon=(pos:28511..28513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00580;product=tRNA-Asn NSLT01000002.1 tRNAscan-SE exon 28477 28550 . + . ID=exon-CLI76_00580-1;Parent=rna-CLI76_00580;anticodon=(pos:28511..28513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00580;product=tRNA-Asn NSLT01000002.1 Genbank gene 28573 28649 . + . ID=gene-CLI76_00585;Name=CLI76_00585;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00585 NSLT01000002.1 tRNAscan-SE tRNA 28573 28649 . + . ID=rna-CLI76_00585;Parent=gene-CLI76_00585;anticodon=(pos:28607..28609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00585;product=tRNA-Asn NSLT01000002.1 tRNAscan-SE exon 28573 28649 . + . ID=exon-CLI76_00585-1;Parent=rna-CLI76_00585;anticodon=(pos:28607..28609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00585;product=tRNA-Asn NSLT01000002.1 Genbank gene 28777 30156 . + . ID=gene-CLI76_00590;Name=CLI76_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00590 NSLT01000002.1 Protein Homology CDS 28777 30156 . + 0 ID=cds-PDP78085.1;Parent=gene-CLI76_00590;Dbxref=NCBI_GP:PDP78085.1;Name=PDP78085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965278.1;locus_tag=CLI76_00590;product=MATE family efflux transporter;protein_id=PDP78085.1;transl_table=11 NSLT01000002.1 Genbank gene 30209 31363 . + . ID=gene-CLI76_00595;Name=CLI76_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00595 NSLT01000002.1 Protein Homology CDS 30209 31363 . + 0 ID=cds-PDP78086.1;Parent=gene-CLI76_00595;Dbxref=NCBI_GP:PDP78086.1;Name=PDP78086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457162.1;locus_tag=CLI76_00595;product=phosphoesterase;protein_id=PDP78086.1;transl_table=11 NSLT01000002.1 Genbank gene 31437 32144 . - . ID=gene-CLI76_00600;Name=CLI76_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00600 NSLT01000002.1 Protein Homology CDS 31437 32144 . - 0 ID=cds-PDP78087.1;Parent=gene-CLI76_00600;Dbxref=NCBI_GP:PDP78087.1;Name=PDP78087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815104.1;locus_tag=CLI76_00600;product=NAD-dependent deacylase;protein_id=PDP78087.1;transl_table=11 NSLT01000002.1 Genbank gene 32224 33243 . + . ID=gene-CLI76_00605;Name=CLI76_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00605 NSLT01000002.1 Protein Homology CDS 32224 33243 . + 0 ID=cds-PDP78088.1;Parent=gene-CLI76_00605;Dbxref=NCBI_GP:PDP78088.1;Name=PDP78088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457160.1;locus_tag=CLI76_00605;product=acyltransferase;protein_id=PDP78088.1;transl_table=11 NSLT01000002.1 Genbank gene 33245 33817 . - . ID=gene-CLI76_00610;Name=CLI76_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00610 NSLT01000002.1 Protein Homology CDS 33245 33817 . - 0 ID=cds-PDP78089.1;Parent=gene-CLI76_00610;Dbxref=NCBI_GP:PDP78089.1;Name=PDP78089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874764.1;locus_tag=CLI76_00610;product=N-acetyltransferase;protein_id=PDP78089.1;transl_table=11 NSLT01000002.1 Genbank gene 33830 35251 . - . ID=gene-CLI76_00615;Name=CLI76_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00615 NSLT01000002.1 Protein Homology CDS 33830 35251 . - 0 ID=cds-PDP78090.1;Parent=gene-CLI76_00615;Dbxref=NCBI_GP:PDP78090.1;Name=PDP78090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583404.1;locus_tag=CLI76_00615;product=chromosomal replication initiator protein DnaA;protein_id=PDP78090.1;transl_table=11 NSLT01000002.1 Genbank pseudogene 35729 35872 . + . ID=gene-CLI76_00620;Name=CLI76_00620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00620;pseudo=true NSLT01000002.1 Protein Homology CDS 35729 35872 . + 0 ID=cds-CLI76_00620;Parent=gene-CLI76_00620;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_00620;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000002.1 Genbank gene 35925 36581 . - . ID=gene-CLI76_00625;Name=CLI76_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00625 NSLT01000002.1 Protein Homology CDS 35925 36581 . - 0 ID=cds-PDP78091.1;Parent=gene-CLI76_00625;Dbxref=NCBI_GP:PDP78091.1;Name=PDP78091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816730.1;locus_tag=CLI76_00625;product=hypothetical protein;protein_id=PDP78091.1;transl_table=11 NSLT01000002.1 Genbank gene 36578 38800 . - . ID=gene-CLI76_00630;Name=CLI76_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00630 NSLT01000002.1 Protein Homology CDS 36578 38800 . - 0 ID=cds-PDP78092.1;Parent=gene-CLI76_00630;Dbxref=NCBI_GP:PDP78092.1;Name=PDP78092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874760.1;locus_tag=CLI76_00630;product=hypothetical protein;protein_id=PDP78092.1;transl_table=11 NSLT01000002.1 Genbank gene 38880 39176 . - . ID=gene-CLI76_00635;Name=CLI76_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00635 NSLT01000002.1 Protein Homology CDS 38880 39176 . - 0 ID=cds-PDP78093.1;Parent=gene-CLI76_00635;Dbxref=NCBI_GP:PDP78093.1;Name=PDP78093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874754.1;locus_tag=CLI76_00635;product=transcriptional regulator;protein_id=PDP78093.1;transl_table=11 NSLT01000002.1 Genbank gene 39169 39798 . - . ID=gene-CLI76_00640;Name=CLI76_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00640 NSLT01000002.1 Protein Homology CDS 39169 39798 . - 0 ID=cds-PDP78094.1;Parent=gene-CLI76_00640;Dbxref=NCBI_GP:PDP78094.1;Name=PDP78094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583400.1;locus_tag=CLI76_00640;product=hypothetical protein;protein_id=PDP78094.1;transl_table=11 NSLT01000002.1 Genbank gene 39908 40918 . - . ID=gene-CLI76_00645;Name=CLI76_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00645 NSLT01000002.1 Protein Homology CDS 39908 40918 . - 0 ID=cds-PDP78095.1;Parent=gene-CLI76_00645;Dbxref=NCBI_GP:PDP78095.1;Name=PDP78095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965120.1;locus_tag=CLI76_00645;product=glycosyl transferase family 2;protein_id=PDP78095.1;transl_table=11 NSLT01000002.1 Genbank gene 40915 41832 . - . ID=gene-CLI76_00650;Name=CLI76_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00650 NSLT01000002.1 Protein Homology CDS 40915 41832 . - 0 ID=cds-PDP78096.1;Parent=gene-CLI76_00650;Dbxref=NCBI_GP:PDP78096.1;Name=PDP78096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583398.1;locus_tag=CLI76_00650;product=acyltransferase;protein_id=PDP78096.1;transl_table=11 NSLT01000002.1 Genbank gene 41829 43163 . - . ID=gene-CLI76_00655;Name=CLI76_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00655 NSLT01000002.1 Protein Homology CDS 41829 43163 . - 0 ID=cds-PDP78097.1;Parent=gene-CLI76_00655;Dbxref=NCBI_GP:PDP78097.1;Name=PDP78097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458739.1;locus_tag=CLI76_00655;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=PDP78097.1;transl_table=11 NSLT01000002.1 Genbank gene 43297 43650 . - . ID=gene-CLI76_00660;Name=CLI76_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00660 NSLT01000002.1 Protein Homology CDS 43297 43650 . - 0 ID=cds-PDP78098.1;Parent=gene-CLI76_00660;Dbxref=NCBI_GP:PDP78098.1;Name=PDP78098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956526.1;locus_tag=CLI76_00660;product=hypothetical protein;protein_id=PDP78098.1;transl_table=11 NSLT01000002.1 Genbank gene 43913 43983 . + . ID=gene-CLI76_00665;Name=CLI76_00665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00665 NSLT01000002.1 tRNAscan-SE tRNA 43913 43983 . + . ID=rna-CLI76_00665;Parent=gene-CLI76_00665;anticodon=(pos:43945..43947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00665;product=tRNA-Cys NSLT01000002.1 tRNAscan-SE exon 43913 43983 . + . ID=exon-CLI76_00665-1;Parent=rna-CLI76_00665;anticodon=(pos:43945..43947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00665;product=tRNA-Cys NSLT01000002.1 Genbank gene 44175 45638 . - . ID=gene-CLI76_00670;Name=CLI76_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00670 NSLT01000002.1 Protein Homology CDS 44175 45638 . - 0 ID=cds-PDP78099.1;Parent=gene-CLI76_00670;Dbxref=NCBI_GP:PDP78099.1;Name=PDP78099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965117.1;locus_tag=CLI76_00670;product=potassium transporter;protein_id=PDP78099.1;transl_table=11 NSLT01000002.1 Genbank gene 45665 47005 . - . ID=gene-CLI76_00675;Name=CLI76_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00675 NSLT01000002.1 Protein Homology CDS 45665 47005 . - 0 ID=cds-PDP78100.1;Parent=gene-CLI76_00675;Dbxref=NCBI_GP:PDP78100.1;Name=PDP78100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965116.1;locus_tag=CLI76_00675;product=Trk system potassium transporter TrkA;protein_id=PDP78100.1;transl_table=11 NSLT01000002.1 Genbank gene 47059 48963 . - . ID=gene-CLI76_00680;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CLI76_00680 NSLT01000002.1 Protein Homology CDS 47059 48963 . - 0 ID=cds-PDP78101.1;Parent=gene-CLI76_00680;Dbxref=NCBI_GP:PDP78101.1;Name=PDP78101.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874298.1;locus_tag=CLI76_00680;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=PDP78101.1;transl_table=11 NSLT01000002.1 Genbank gene 49136 50650 . - . ID=gene-CLI76_00685;Name=CLI76_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00685 NSLT01000002.1 Protein Homology CDS 49136 50650 . - 0 ID=cds-PDP78132.1;Parent=gene-CLI76_00685;Dbxref=NCBI_GP:PDP78132.1;Name=PDP78132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874286.1;locus_tag=CLI76_00685;product=hypothetical protein;protein_id=PDP78132.1;transl_table=11 NSLT01000002.1 Genbank gene 50928 52013 . + . ID=gene-CLI76_00690;Name=CLI76_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00690 NSLT01000002.1 Protein Homology CDS 50928 52013 . + 0 ID=cds-PDP78102.1;Parent=gene-CLI76_00690;Dbxref=NCBI_GP:PDP78102.1;Name=PDP78102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585616.1;locus_tag=CLI76_00690;product=mannose-1-phosphate guanylyltransferase;protein_id=PDP78102.1;transl_table=11 NSLT01000002.1 Genbank gene 52048 53322 . + . ID=gene-CLI76_00695;Name=CLI76_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00695 NSLT01000002.1 Protein Homology CDS 52048 53322 . + 0 ID=cds-PDP78103.1;Parent=gene-CLI76_00695;Dbxref=NCBI_GP:PDP78103.1;Name=PDP78103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816717.1;locus_tag=CLI76_00695;product=hypothetical protein;protein_id=PDP78103.1;transl_table=11 NSLT01000002.1 Genbank gene 53594 53776 . + . ID=gene-CLI76_00700;Name=CLI76_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00700 NSLT01000002.1 Protein Homology CDS 53594 53776 . + 0 ID=cds-PDP78104.1;Parent=gene-CLI76_00700;Dbxref=NCBI_GP:PDP78104.1;Name=PDP78104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585614.1;locus_tag=CLI76_00700;product=(2Fe-2S)-binding protein;protein_id=PDP78104.1;transl_table=11 NSLT01000002.1 Genbank gene 53857 54141 . + . ID=gene-CLI76_00705;Name=CLI76_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00705 NSLT01000002.1 Protein Homology CDS 53857 54141 . + 0 ID=cds-PDP78105.1;Parent=gene-CLI76_00705;Dbxref=NCBI_GP:PDP78105.1;Name=PDP78105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956523.1;locus_tag=CLI76_00705;product=hypothetical protein;protein_id=PDP78105.1;transl_table=11 NSLT01000002.1 Genbank gene 54328 54403 . + . ID=gene-CLI76_00710;Name=CLI76_00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00710 NSLT01000002.1 tRNAscan-SE tRNA 54328 54403 . + . ID=rna-CLI76_00710;Parent=gene-CLI76_00710;anticodon=(pos:54361..54363);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00710;product=tRNA-Gly NSLT01000002.1 tRNAscan-SE exon 54328 54403 . + . ID=exon-CLI76_00710-1;Parent=rna-CLI76_00710;anticodon=(pos:54361..54363);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00710;product=tRNA-Gly NSLT01000002.1 Genbank gene 54490 54575 . + . ID=gene-CLI76_00715;Name=CLI76_00715;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00715 NSLT01000002.1 tRNAscan-SE tRNA 54490 54575 . + . ID=rna-CLI76_00715;Parent=gene-CLI76_00715;anticodon=(pos:54524..54526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00715;product=tRNA-Leu NSLT01000002.1 tRNAscan-SE exon 54490 54575 . + . ID=exon-CLI76_00715-1;Parent=rna-CLI76_00715;anticodon=(pos:54524..54526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00715;product=tRNA-Leu NSLT01000002.1 Genbank gene 54607 54690 . + . ID=gene-CLI76_00720;Name=CLI76_00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_00720 NSLT01000002.1 tRNAscan-SE tRNA 54607 54690 . + . ID=rna-CLI76_00720;Parent=gene-CLI76_00720;anticodon=(pos:54641..54643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00720;product=tRNA-Leu NSLT01000002.1 tRNAscan-SE exon 54607 54690 . + . ID=exon-CLI76_00720-1;Parent=rna-CLI76_00720;anticodon=(pos:54641..54643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_00720;product=tRNA-Leu NSLT01000002.1 Genbank gene 54815 57673 . + . ID=gene-CLI76_00725;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CLI76_00725 NSLT01000002.1 Protein Homology CDS 54815 57673 . + 0 ID=cds-PDP78106.1;Parent=gene-CLI76_00725;Dbxref=NCBI_GP:PDP78106.1;Name=PDP78106.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585613.1;locus_tag=CLI76_00725;product=excinuclease ABC subunit A;protein_id=PDP78106.1;transl_table=11 NSLT01000002.1 Genbank gene 57697 57951 . + . ID=gene-CLI76_00730;Name=CLI76_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00730 NSLT01000002.1 Protein Homology CDS 57697 57951 . + 0 ID=cds-PDP78107.1;Parent=gene-CLI76_00730;Dbxref=NCBI_GP:PDP78107.1;Name=PDP78107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585612.1;locus_tag=CLI76_00730;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=PDP78107.1;transl_table=11 NSLT01000002.1 Genbank gene 58201 59220 . + . ID=gene-CLI76_00735;Name=CLI76_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00735 NSLT01000002.1 Protein Homology CDS 58201 59220 . + 0 ID=cds-PDP78108.1;Parent=gene-CLI76_00735;Dbxref=NCBI_GP:PDP78108.1;Name=PDP78108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585611.1;locus_tag=CLI76_00735;product=NAD(P)-dependent oxidoreductase;protein_id=PDP78108.1;transl_table=11 NSLT01000002.1 Genbank gene 59496 61112 . + . ID=gene-CLI76_00740;Name=CLI76_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00740 NSLT01000002.1 Protein Homology CDS 59496 61112 . + 0 ID=cds-PDP78109.1;Parent=gene-CLI76_00740;Dbxref=NCBI_GP:PDP78109.1;Name=PDP78109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005854824.1;locus_tag=CLI76_00740;product=ABC-F family ATPase;protein_id=PDP78109.1;transl_table=11 NSLT01000002.1 Genbank gene 61248 62192 . - . ID=gene-CLI76_00745;Name=CLI76_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00745 NSLT01000002.1 Protein Homology CDS 61248 62192 . - 0 ID=cds-PDP78110.1;Parent=gene-CLI76_00745;Dbxref=NCBI_GP:PDP78110.1;Name=PDP78110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585609.1;locus_tag=CLI76_00745;product=2-dehydropantoate 2-reductase;protein_id=PDP78110.1;transl_table=11 NSLT01000002.1 Genbank gene 62206 67932 . - . ID=gene-CLI76_00750;Name=CLI76_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00750 NSLT01000002.1 Protein Homology CDS 62206 67932 . - 0 ID=cds-PDP78111.1;Parent=gene-CLI76_00750;Dbxref=NCBI_GP:PDP78111.1;Name=PDP78111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585608.1;locus_tag=CLI76_00750;product=alpha-2-macroglobulin;protein_id=PDP78111.1;transl_table=11 NSLT01000002.1 Genbank gene 68331 68783 . + . ID=gene-CLI76_00755;Name=CLI76_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00755 NSLT01000002.1 Protein Homology CDS 68331 68783 . + 0 ID=cds-PDP78133.1;Parent=gene-CLI76_00755;Dbxref=NCBI_GP:PDP78133.1;Name=PDP78133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585606.1;locus_tag=CLI76_00755;product=Holliday junction resolvase RuvX;protein_id=PDP78133.1;transl_table=11 NSLT01000002.1 Genbank gene 68780 69457 . + . ID=gene-CLI76_00760;Name=CLI76_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00760 NSLT01000002.1 Protein Homology CDS 68780 69457 . + 0 ID=cds-PDP78112.1;Parent=gene-CLI76_00760;Dbxref=NCBI_GP:PDP78112.1;Name=PDP78112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585605.1;locus_tag=CLI76_00760;product=peptide deformylase;protein_id=PDP78112.1;transl_table=11 NSLT01000002.1 Genbank gene 69493 71580 . + . ID=gene-CLI76_00765;Name=CLI76_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00765 NSLT01000002.1 Protein Homology CDS 69493 71580 . + 0 ID=cds-PDP78113.1;Parent=gene-CLI76_00765;Dbxref=NCBI_GP:PDP78113.1;Name=PDP78113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585604.1;locus_tag=CLI76_00765;product=hypothetical protein;protein_id=PDP78113.1;transl_table=11 NSLT01000002.1 Genbank gene 71577 73514 . + . ID=gene-CLI76_00770;Name=CLI76_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00770 NSLT01000002.1 Protein Homology CDS 71577 73514 . + 0 ID=cds-PDP78114.1;Parent=gene-CLI76_00770;Dbxref=NCBI_GP:PDP78114.1;Name=PDP78114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458727.1;locus_tag=CLI76_00770;product=glycosyl transferase family 2;protein_id=PDP78114.1;transl_table=11 NSLT01000002.1 Genbank gene 73756 74637 . - . ID=gene-CLI76_00775;Name=CLI76_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00775 NSLT01000002.1 Protein Homology CDS 73756 74637 . - 0 ID=cds-PDP78115.1;Parent=gene-CLI76_00775;Dbxref=NCBI_GP:PDP78115.1;Name=PDP78115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458726.1;locus_tag=CLI76_00775;product=peptidase;protein_id=PDP78115.1;transl_table=11 NSLT01000002.1 Genbank gene 74848 75645 . - . ID=gene-CLI76_00780;Name=CLI76_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00780 NSLT01000002.1 Protein Homology CDS 74848 75645 . - 0 ID=cds-PDP78116.1;Parent=gene-CLI76_00780;Dbxref=NCBI_GP:PDP78116.1;Name=PDP78116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874288.1;locus_tag=CLI76_00780;product=peptidase M48 family protein;protein_id=PDP78116.1;transl_table=11 NSLT01000002.1 Genbank gene 75877 76671 . + . ID=gene-CLI76_00785;Name=CLI76_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00785 NSLT01000002.1 Protein Homology CDS 75877 76671 . + 0 ID=cds-PDP78117.1;Parent=gene-CLI76_00785;Dbxref=NCBI_GP:PDP78117.1;Name=PDP78117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_810960.1;locus_tag=CLI76_00785;product=thymidylate synthase;protein_id=PDP78117.1;transl_table=11 NSLT01000002.1 Genbank gene 76717 77205 . + . ID=gene-CLI76_00790;Name=CLI76_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00790 NSLT01000002.1 Protein Homology CDS 76717 77205 . + 0 ID=cds-PDP78118.1;Parent=gene-CLI76_00790;Dbxref=NCBI_GP:PDP78118.1;Name=PDP78118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585598.1;locus_tag=CLI76_00790;product=dihydrofolate reductase;protein_id=PDP78118.1;transl_table=11 NSLT01000002.1 Genbank gene 77266 78630 . + . ID=gene-CLI76_00795;Name=CLI76_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00795 NSLT01000002.1 Protein Homology CDS 77266 78630 . + 0 ID=cds-PDP78119.1;Parent=gene-CLI76_00795;Dbxref=NCBI_GP:PDP78119.1;Name=PDP78119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585597.1;locus_tag=CLI76_00795;product=histidine--tRNA ligase;protein_id=PDP78119.1;transl_table=11 NSLT01000002.1 Genbank gene 78635 78841 . - . ID=gene-CLI76_00800;Name=CLI76_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00800 NSLT01000002.1 Protein Homology CDS 78635 78841 . - 0 ID=cds-PDP78120.1;Parent=gene-CLI76_00800;Dbxref=NCBI_GP:PDP78120.1;Name=PDP78120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458721.1;locus_tag=CLI76_00800;product=hypothetical protein;protein_id=PDP78120.1;transl_table=11 NSLT01000002.1 Genbank gene 78845 79249 . + . ID=gene-CLI76_00805;Name=CLI76_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00805 NSLT01000002.1 Protein Homology CDS 78845 79249 . + 0 ID=cds-PDP78121.1;Parent=gene-CLI76_00805;Dbxref=NCBI_GP:PDP78121.1;Name=PDP78121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_00805;product=DUF1661 domain-containing protein;protein_id=PDP78121.1;transl_table=11 NSLT01000002.1 Genbank gene 79262 80320 . + . ID=gene-CLI76_00810;Name=CLI76_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00810 NSLT01000002.1 Protein Homology CDS 79262 80320 . + 0 ID=cds-PDP78122.1;Parent=gene-CLI76_00810;Dbxref=NCBI_GP:PDP78122.1;Name=PDP78122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458719.1;locus_tag=CLI76_00810;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=PDP78122.1;transl_table=11 NSLT01000002.1 Genbank gene 80411 81466 . + . ID=gene-CLI76_00815;Name=CLI76_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00815 NSLT01000002.1 Protein Homology CDS 80411 81466 . + 0 ID=cds-PDP78123.1;Parent=gene-CLI76_00815;Dbxref=NCBI_GP:PDP78123.1;Name=PDP78123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874706.1;locus_tag=CLI76_00815;product=DUF4837 domain-containing protein;protein_id=PDP78123.1;transl_table=11 NSLT01000002.1 Genbank gene 81510 82607 . + . ID=gene-CLI76_00820;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CLI76_00820 NSLT01000002.1 Protein Homology CDS 81510 82607 . + 0 ID=cds-PDP78124.1;Parent=gene-CLI76_00820;Dbxref=NCBI_GP:PDP78124.1;Name=PDP78124.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585593.1;locus_tag=CLI76_00820;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=PDP78124.1;transl_table=11 NSLT01000002.1 Genbank gene 82629 83087 . + . ID=gene-CLI76_00825;Name=CLI76_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00825 NSLT01000002.1 Protein Homology CDS 82629 83087 . + 0 ID=cds-PDP78125.1;Parent=gene-CLI76_00825;Dbxref=NCBI_GP:PDP78125.1;Name=PDP78125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585592.1;locus_tag=CLI76_00825;product=glycerol-3-phosphate cytidylyltransferase;protein_id=PDP78125.1;transl_table=11 NSLT01000002.1 Genbank gene 83093 83824 . + . ID=gene-CLI76_00830;Name=CLI76_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00830 NSLT01000002.1 Protein Homology CDS 83093 83824 . + 0 ID=cds-PDP78126.1;Parent=gene-CLI76_00830;Dbxref=NCBI_GP:PDP78126.1;Name=PDP78126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585591.1;locus_tag=CLI76_00830;product=short-chain dehydrogenase;protein_id=PDP78126.1;transl_table=11 NSLT01000002.1 Genbank gene 83836 84762 . + . ID=gene-CLI76_00835;Name=CLI76_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00835 NSLT01000002.1 Protein Homology CDS 83836 84762 . + 0 ID=cds-PDP78127.1;Parent=gene-CLI76_00835;Dbxref=NCBI_GP:PDP78127.1;Name=PDP78127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585590.1;locus_tag=CLI76_00835;product=CDP-alcohol phosphatidyltransferase;protein_id=PDP78127.1;transl_table=11 NSLT01000002.1 Genbank gene 84807 85667 . + . ID=gene-CLI76_00840;Name=CLI76_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00840 NSLT01000002.1 Protein Homology CDS 84807 85667 . + 0 ID=cds-PDP78128.1;Parent=gene-CLI76_00840;Dbxref=NCBI_GP:PDP78128.1;Name=PDP78128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874711.1;locus_tag=CLI76_00840;product=hypothetical protein;protein_id=PDP78128.1;transl_table=11 NSLT01000002.1 Genbank gene 85664 88888 . + . ID=gene-CLI76_00845;Name=CLI76_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00845 NSLT01000002.1 Protein Homology CDS 85664 88888 . + 0 ID=cds-PDP78129.1;Parent=gene-CLI76_00845;Dbxref=NCBI_GP:PDP78129.1;Name=PDP78129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585588.1;locus_tag=CLI76_00845;product=DNA helicase UvrD;protein_id=PDP78129.1;transl_table=11 NSLT01000002.1 Genbank gene 89094 89204 . - . ID=gene-CLI76_00850;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI76_00850 NSLT01000002.1 cmsearch rRNA 89094 89204 . - . ID=rna-CLI76_00850;Parent=gene-CLI76_00850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_00850;product=5S ribosomal RNA NSLT01000002.1 cmsearch exon 89094 89204 . - . ID=exon-CLI76_00850-1;Parent=rna-CLI76_00850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_00850;product=5S ribosomal RNA ##sequence-region NSLT01000030.1 1 28632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000030.1 Genbank region 1 28632 . + . ID=NSLT01000030.1:1..28632;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000030.1 Genbank gene 424 2703 . + . ID=gene-CLI76_06690;Name=CLI76_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06690 NSLT01000030.1 Protein Homology CDS 424 2703 . + 0 ID=cds-PDP76992.1;Parent=gene-CLI76_06690;Dbxref=NCBI_GP:PDP76992.1;Name=PDP76992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366217.1;locus_tag=CLI76_06690;product=NADP-dependent malic enzyme;protein_id=PDP76992.1;transl_table=11 NSLT01000030.1 Genbank gene 2931 3368 . - . ID=gene-CLI76_06695;Name=CLI76_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06695 NSLT01000030.1 Protein Homology CDS 2931 3368 . - 0 ID=cds-PDP76969.1;Parent=gene-CLI76_06695;Dbxref=NCBI_GP:PDP76969.1;Name=PDP76969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816108.1;locus_tag=CLI76_06695;product=hypothetical protein;protein_id=PDP76969.1;transl_table=11 NSLT01000030.1 Genbank gene 3403 3840 . - . ID=gene-CLI76_06700;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=CLI76_06700 NSLT01000030.1 Protein Homology CDS 3403 3840 . - 0 ID=cds-PDP76970.1;Parent=gene-CLI76_06700;Dbxref=NCBI_GP:PDP76970.1;Name=PDP76970.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964259.1;locus_tag=CLI76_06700;product=ribose 5-phosphate isomerase B;protein_id=PDP76970.1;transl_table=11 NSLT01000030.1 Genbank gene 3927 5954 . - . ID=gene-CLI76_06705;Name=CLI76_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06705 NSLT01000030.1 Protein Homology CDS 3927 5954 . - 0 ID=cds-PDP76971.1;Parent=gene-CLI76_06705;Dbxref=NCBI_GP:PDP76971.1;Name=PDP76971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584752.1;locus_tag=CLI76_06705;product=transketolase;protein_id=PDP76971.1;transl_table=11 NSLT01000030.1 Genbank gene 6398 8218 . + . ID=gene-CLI76_06710;Name=CLI76_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06710 NSLT01000030.1 Protein Homology CDS 6398 8218 . + 0 ID=cds-PDP76972.1;Parent=gene-CLI76_06710;Dbxref=NCBI_GP:PDP76972.1;Name=PDP76972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875390.1;locus_tag=CLI76_06710;product=alpha-1%2C3/4-fucosidase;protein_id=PDP76972.1;transl_table=11 NSLT01000030.1 Genbank gene 8357 9487 . + . ID=gene-CLI76_06715;Name=CLI76_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06715 NSLT01000030.1 Protein Homology CDS 8357 9487 . + 0 ID=cds-PDP76973.1;Parent=gene-CLI76_06715;Dbxref=NCBI_GP:PDP76973.1;Name=PDP76973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965469.1;locus_tag=CLI76_06715;product=aminotransferase;protein_id=PDP76973.1;transl_table=11 NSLT01000030.1 Genbank gene 9471 9695 . + . ID=gene-CLI76_06720;Name=CLI76_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06720 NSLT01000030.1 Protein Homology CDS 9471 9695 . + 0 ID=cds-PDP76974.1;Parent=gene-CLI76_06720;Dbxref=NCBI_GP:PDP76974.1;Name=PDP76974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965470.1;locus_tag=CLI76_06720;product=DUF3343 domain-containing protein;protein_id=PDP76974.1;transl_table=11 NSLT01000030.1 Genbank gene 9692 10738 . + . ID=gene-CLI76_06725;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CLI76_06725 NSLT01000030.1 Protein Homology CDS 9692 10738 . + 0 ID=cds-PDP76975.1;Parent=gene-CLI76_06725;Dbxref=NCBI_GP:PDP76975.1;Name=PDP76975.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816104.1;locus_tag=CLI76_06725;product=selenide%2C water dikinase SelD;protein_id=PDP76975.1;transl_table=11 NSLT01000030.1 Genbank gene 10756 13281 . + . ID=gene-CLI76_06730;Name=CLI76_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06730 NSLT01000030.1 Protein Homology CDS 10756 13281 . + 0 ID=cds-PDP76976.1;Parent=gene-CLI76_06730;Dbxref=NCBI_GP:PDP76976.1;Name=PDP76976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458464.1;locus_tag=CLI76_06730;product=S9 family peptidase;protein_id=PDP76976.1;transl_table=11 NSLT01000030.1 Genbank gene 13424 14305 . - . ID=gene-CLI76_06735;Name=CLI76_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06735 NSLT01000030.1 Protein Homology CDS 13424 14305 . - 0 ID=cds-PDP76977.1;Parent=gene-CLI76_06735;Dbxref=NCBI_GP:PDP76977.1;Name=PDP76977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004330958.1;locus_tag=CLI76_06735;product=class I fructose-bisphosphate aldolase;protein_id=PDP76977.1;transl_table=11 NSLT01000030.1 Genbank gene 14958 15989 . - . ID=gene-CLI76_06740;Name=CLI76_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06740 NSLT01000030.1 Protein Homology CDS 14958 15989 . - 0 ID=cds-PDP76978.1;Parent=gene-CLI76_06740;Dbxref=NCBI_GP:PDP76978.1;Name=PDP76978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965475.1;locus_tag=CLI76_06740;product=hypothetical protein;protein_id=PDP76978.1;transl_table=11 NSLT01000030.1 Genbank gene 16262 16531 . + . ID=gene-CLI76_06745;Name=CLI76_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06745 NSLT01000030.1 Protein Homology CDS 16262 16531 . + 0 ID=cds-PDP76979.1;Parent=gene-CLI76_06745;Dbxref=NCBI_GP:PDP76979.1;Name=PDP76979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467430.1;locus_tag=CLI76_06745;product=30S ribosomal protein S15;protein_id=PDP76979.1;transl_table=11 NSLT01000030.1 Genbank gene 16547 16735 . - . ID=gene-CLI76_06750;Name=CLI76_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06750 NSLT01000030.1 Protein Homology CDS 16547 16735 . - 0 ID=cds-PDP76980.1;Parent=gene-CLI76_06750;Dbxref=NCBI_GP:PDP76980.1;Name=PDP76980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584740.1;locus_tag=CLI76_06750;product=hypothetical protein;protein_id=PDP76980.1;transl_table=11 NSLT01000030.1 Genbank gene 16647 17594 . + . ID=gene-CLI76_06755;Name=CLI76_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06755 NSLT01000030.1 Protein Homology CDS 16647 17594 . + 0 ID=cds-PDP76981.1;Parent=gene-CLI76_06755;Dbxref=NCBI_GP:PDP76981.1;Name=PDP76981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956396.1;locus_tag=CLI76_06755;product=adhesin;protein_id=PDP76981.1;transl_table=11 NSLT01000030.1 Genbank gene 17584 18213 . + . ID=gene-CLI76_06760;Name=CLI76_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06760 NSLT01000030.1 Protein Homology CDS 17584 18213 . + 0 ID=cds-PDP76982.1;Parent=gene-CLI76_06760;Dbxref=NCBI_GP:PDP76982.1;Name=PDP76982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956397.1;locus_tag=CLI76_06760;product=ABC transporter ATP-binding protein;protein_id=PDP76982.1;transl_table=11 NSLT01000030.1 Genbank gene 18290 18715 . + . ID=gene-CLI76_06765;Name=CLI76_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06765 NSLT01000030.1 Protein Homology CDS 18290 18715 . + 0 ID=cds-PDP76993.1;Parent=gene-CLI76_06765;Dbxref=NCBI_GP:PDP76993.1;Name=PDP76993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965478.1;locus_tag=CLI76_06765;product=N-acetyltransferase;protein_id=PDP76993.1;transl_table=11 NSLT01000030.1 Genbank gene 18955 21900 . + . ID=gene-CLI76_06770;Name=CLI76_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06770 NSLT01000030.1 Protein Homology CDS 18955 21900 . + 0 ID=cds-PDP76983.1;Parent=gene-CLI76_06770;Dbxref=NCBI_GP:PDP76983.1;Name=PDP76983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816099.1;locus_tag=CLI76_06770;product=protein translocase subunit SecDF;protein_id=PDP76983.1;transl_table=11 NSLT01000030.1 Genbank gene 22027 22812 . - . ID=gene-CLI76_06775;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CLI76_06775 NSLT01000030.1 Protein Homology CDS 22027 22812 . - 0 ID=cds-PDP76984.1;Parent=gene-CLI76_06775;Dbxref=NCBI_GP:PDP76984.1;Name=PDP76984.1;gbkey=CDS;gene=rnc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584735.1;locus_tag=CLI76_06775;product=ribonuclease III;protein_id=PDP76984.1;transl_table=11 NSLT01000030.1 Genbank gene 22824 24080 . - . ID=gene-CLI76_06780;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CLI76_06780 NSLT01000030.1 Protein Homology CDS 22824 24080 . - 0 ID=cds-PDP76985.1;Parent=gene-CLI76_06780;Dbxref=NCBI_GP:PDP76985.1;Name=PDP76985.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005645359.1;locus_tag=CLI76_06780;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=PDP76985.1;transl_table=11 NSLT01000030.1 Genbank gene 24090 24326 . - . ID=gene-CLI76_06785;Name=CLI76_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06785 NSLT01000030.1 Protein Homology CDS 24090 24326 . - 0 ID=cds-PDP76986.1;Parent=gene-CLI76_06785;Dbxref=NCBI_GP:PDP76986.1;Name=PDP76986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010855324.1;locus_tag=CLI76_06785;product=acyl carrier protein;protein_id=PDP76986.1;transl_table=11 NSLT01000030.1 Genbank gene 24495 25076 . + . ID=gene-CLI76_06790;Name=CLI76_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06790 NSLT01000030.1 Protein Homology CDS 24495 25076 . + 0 ID=cds-PDP76987.1;Parent=gene-CLI76_06790;Dbxref=NCBI_GP:PDP76987.1;Name=PDP76987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873718.1;locus_tag=CLI76_06790;product=phosphoribosylglycinamide formyltransferase;protein_id=PDP76987.1;transl_table=11 NSLT01000030.1 Genbank gene 25091 26113 . + . ID=gene-CLI76_06795;Name=CLI76_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06795 NSLT01000030.1 Protein Homology CDS 25091 26113 . + 0 ID=cds-PDP76988.1;Parent=gene-CLI76_06795;Dbxref=NCBI_GP:PDP76988.1;Name=PDP76988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584731.1;locus_tag=CLI76_06795;product=antioxidant%2C AhpC/TSA family protein;protein_id=PDP76988.1;transl_table=11 NSLT01000030.1 Genbank gene 26139 27680 . + . ID=gene-CLI76_06800;Name=CLI76_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06800 NSLT01000030.1 Protein Homology CDS 26139 27680 . + 0 ID=cds-PDP76989.1;Parent=gene-CLI76_06800;Dbxref=NCBI_GP:PDP76989.1;Name=PDP76989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584730.1;locus_tag=CLI76_06800;product=magnesium chelatase;protein_id=PDP76989.1;transl_table=11 NSLT01000030.1 Genbank gene 27685 28008 . + . ID=gene-CLI76_06805;Name=CLI76_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06805 NSLT01000030.1 Protein Homology CDS 27685 28008 . + 0 ID=cds-PDP76990.1;Parent=gene-CLI76_06805;Dbxref=NCBI_GP:PDP76990.1;Name=PDP76990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873723.1;locus_tag=CLI76_06805;product=hypothetical protein;protein_id=PDP76990.1;transl_table=11 NSLT01000030.1 Genbank gene 28260 28632 . + . ID=gene-CLI76_06810;Name=CLI76_06810;end_range=28632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06810;partial=true NSLT01000030.1 Protein Homology CDS 28260 28632 . + 0 ID=cds-PDP76991.1;Parent=gene-CLI76_06810;Dbxref=NCBI_GP:PDP76991.1;Name=PDP76991.1;end_range=28632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_06810;partial=true;product=IS3 family transposase;protein_id=PDP76991.1;transl_table=11 ##sequence-region NSLT01000031.1 1 27271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000031.1 Genbank region 1 27271 . + . ID=NSLT01000031.1:1..27271;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000031.1 Genbank pseudogene 139 1153 . - . ID=gene-CLI76_06815;Name=CLI76_06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06815;pseudo=true NSLT01000031.1 Protein Homology CDS 139 1153 . - 0 ID=cds-CLI76_06815;Parent=gene-CLI76_06815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226350.1;locus_tag=CLI76_06815;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLT01000031.1 Genbank pseudogene 1331 1453 . + . ID=gene-CLI76_06820;Name=CLI76_06820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06820;pseudo=true NSLT01000031.1 Protein Homology CDS 1331 1453 . + 0 ID=cds-CLI76_06820;Parent=gene-CLI76_06820;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_06820;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000031.1 Genbank gene 1684 2031 . - . ID=gene-CLI76_06825;Name=CLI76_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06825 NSLT01000031.1 Protein Homology CDS 1684 2031 . - 0 ID=cds-PDP76948.1;Parent=gene-CLI76_06825;Dbxref=NCBI_GP:PDP76948.1;Name=PDP76948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457918.1;locus_tag=CLI76_06825;product=50S ribosomal protein L20;protein_id=PDP76948.1;transl_table=11 NSLT01000031.1 Genbank gene 2144 2341 . - . ID=gene-CLI76_06830;Name=CLI76_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06830 NSLT01000031.1 Protein Homology CDS 2144 2341 . - 0 ID=cds-PDP76949.1;Parent=gene-CLI76_06830;Dbxref=NCBI_GP:PDP76949.1;Name=PDP76949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432744.1;locus_tag=CLI76_06830;product=50S ribosomal protein L35;protein_id=PDP76949.1;transl_table=11 NSLT01000031.1 Genbank gene 2419 3024 . - . ID=gene-CLI76_06835;Name=CLI76_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06835 NSLT01000031.1 Protein Homology CDS 2419 3024 . - 0 ID=cds-PDP76950.1;Parent=gene-CLI76_06835;Dbxref=NCBI_GP:PDP76950.1;Name=PDP76950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584227.1;locus_tag=CLI76_06835;product=translation initiation factor IF-3;protein_id=PDP76950.1;transl_table=11 NSLT01000031.1 Genbank gene 3129 5090 . - . ID=gene-CLI76_06840;Name=CLI76_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06840 NSLT01000031.1 Protein Homology CDS 3129 5090 . - 0 ID=cds-PDP76951.1;Parent=gene-CLI76_06840;Dbxref=NCBI_GP:PDP76951.1;Name=PDP76951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964838.1;locus_tag=CLI76_06840;product=threonine--tRNA ligase;protein_id=PDP76951.1;transl_table=11 NSLT01000031.1 Genbank pseudogene 5327 5758 . - . ID=gene-CLI76_06845;Name=CLI76_06845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06845;pseudo=true NSLT01000031.1 Protein Homology CDS 5327 5758 . - 0 ID=cds-CLI76_06845;Parent=gene-CLI76_06845;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815996.1;locus_tag=CLI76_06845;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLT01000031.1 Genbank gene 6633 7541 . + . ID=gene-CLI76_06850;Name=CLI76_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06850 NSLT01000031.1 Protein Homology CDS 6633 7541 . + 0 ID=cds-PDP76968.1;Parent=gene-CLI76_06850;Dbxref=NCBI_GP:PDP76968.1;Name=PDP76968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956180.1;locus_tag=CLI76_06850;product=TIGR01777 family protein;protein_id=PDP76968.1;transl_table=11 NSLT01000031.1 Genbank gene 7701 7967 . + . ID=gene-CLI76_06855;Name=CLI76_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06855 NSLT01000031.1 Protein Homology CDS 7701 7967 . + 0 ID=cds-PDP76952.1;Parent=gene-CLI76_06855;Dbxref=NCBI_GP:PDP76952.1;Name=PDP76952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014298366.1;locus_tag=CLI76_06855;product=XRE family transcriptional regulator;protein_id=PDP76952.1;transl_table=11 NSLT01000031.1 Genbank gene 8064 8606 . + . ID=gene-CLI76_06860;Name=CLI76_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06860 NSLT01000031.1 Protein Homology CDS 8064 8606 . + 0 ID=cds-PDP76953.1;Parent=gene-CLI76_06860;Dbxref=NCBI_GP:PDP76953.1;Name=PDP76953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457913.1;locus_tag=CLI76_06860;product=HXXEE domain-containing protein;protein_id=PDP76953.1;transl_table=11 NSLT01000031.1 Genbank gene 8629 9261 . + . ID=gene-CLI76_06865;Name=CLI76_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06865 NSLT01000031.1 Protein Homology CDS 8629 9261 . + 0 ID=cds-PDP76954.1;Parent=gene-CLI76_06865;Dbxref=NCBI_GP:PDP76954.1;Name=PDP76954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874105.1;locus_tag=CLI76_06865;product=DNA alkylation repair enzyme;protein_id=PDP76954.1;transl_table=11 NSLT01000031.1 Genbank gene 9265 9801 . + . ID=gene-CLI76_06870;Name=CLI76_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06870 NSLT01000031.1 Protein Homology CDS 9265 9801 . + 0 ID=cds-PDP76955.1;Parent=gene-CLI76_06870;Dbxref=NCBI_GP:PDP76955.1;Name=PDP76955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874108.1;locus_tag=CLI76_06870;product=ClbS/DfsB family four-helix bundle protein;protein_id=PDP76955.1;transl_table=11 NSLT01000031.1 Genbank pseudogene 9815 10215 . + . ID=gene-CLI76_06875;Name=CLI76_06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06875;pseudo=true NSLT01000031.1 Protein Homology CDS 9815 10215 . + 0 ID=cds-CLI76_06875;Parent=gene-CLI76_06875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874091.1;locus_tag=CLI76_06875;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000031.1 Genbank gene 10289 11281 . + . ID=gene-CLI76_06880;Name=CLI76_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06880 NSLT01000031.1 Protein Homology CDS 10289 11281 . + 0 ID=cds-PDP76956.1;Parent=gene-CLI76_06880;Dbxref=NCBI_GP:PDP76956.1;Name=PDP76956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815755.1;locus_tag=CLI76_06880;product=nitroreductase;protein_id=PDP76956.1;transl_table=11 NSLT01000031.1 Genbank gene 11440 13719 . - . ID=gene-CLI76_06885;Name=CLI76_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06885 NSLT01000031.1 Protein Homology CDS 11440 13719 . - 0 ID=cds-PDP76957.1;Parent=gene-CLI76_06885;Dbxref=NCBI_GP:PDP76957.1;Name=PDP76957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874085.1;locus_tag=CLI76_06885;product=S9 family peptidase;protein_id=PDP76957.1;transl_table=11 NSLT01000031.1 Genbank gene 14025 14765 . - . ID=gene-CLI76_06890;Name=CLI76_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06890 NSLT01000031.1 Protein Homology CDS 14025 14765 . - 0 ID=cds-PDP76958.1;Parent=gene-CLI76_06890;Dbxref=NCBI_GP:PDP76958.1;Name=PDP76958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965983.1;locus_tag=CLI76_06890;product=DUF2807 domain-containing protein;protein_id=PDP76958.1;transl_table=11 NSLT01000031.1 Genbank gene 14796 17246 . - . ID=gene-CLI76_06895;Name=CLI76_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06895 NSLT01000031.1 Protein Homology CDS 14796 17246 . - 0 ID=cds-PDP76959.1;Parent=gene-CLI76_06895;Dbxref=NCBI_GP:PDP76959.1;Name=PDP76959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965984.1;locus_tag=CLI76_06895;product=TonB-dependent receptor;protein_id=PDP76959.1;transl_table=11 NSLT01000031.1 Genbank gene 17520 17891 . - . ID=gene-CLI76_06900;Name=CLI76_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06900 NSLT01000031.1 Protein Homology CDS 17520 17891 . - 0 ID=cds-PDP76960.1;Parent=gene-CLI76_06900;Dbxref=NCBI_GP:PDP76960.1;Name=PDP76960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584244.1;locus_tag=CLI76_06900;product=GntR family transcriptional regulator;protein_id=PDP76960.1;transl_table=11 NSLT01000031.1 Genbank gene 17888 18646 . - . ID=gene-CLI76_06905;Name=CLI76_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06905 NSLT01000031.1 Protein Homology CDS 17888 18646 . - 0 ID=cds-PDP76961.1;Parent=gene-CLI76_06905;Dbxref=NCBI_GP:PDP76961.1;Name=PDP76961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458204.1;locus_tag=CLI76_06905;product=hypothetical protein;protein_id=PDP76961.1;transl_table=11 NSLT01000031.1 Genbank gene 18643 19497 . - . ID=gene-CLI76_06910;Name=CLI76_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06910 NSLT01000031.1 Protein Homology CDS 18643 19497 . - 0 ID=cds-PDP76962.1;Parent=gene-CLI76_06910;Dbxref=NCBI_GP:PDP76962.1;Name=PDP76962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874083.1;locus_tag=CLI76_06910;product=hypothetical protein;protein_id=PDP76962.1;transl_table=11 NSLT01000031.1 Genbank gene 19511 20338 . - . ID=gene-CLI76_06915;Name=CLI76_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06915 NSLT01000031.1 Protein Homology CDS 19511 20338 . - 0 ID=cds-PDP76963.1;Parent=gene-CLI76_06915;Dbxref=NCBI_GP:PDP76963.1;Name=PDP76963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815760.1;locus_tag=CLI76_06915;product=ABC transporter ATP-binding protein;protein_id=PDP76963.1;transl_table=11 NSLT01000031.1 Genbank gene 20338 20520 . + . ID=gene-CLI76_06920;Name=CLI76_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06920 NSLT01000031.1 GeneMarkS+ CDS 20338 20520 . + 0 ID=cds-PDP76964.1;Parent=gene-CLI76_06920;Dbxref=NCBI_GP:PDP76964.1;Name=PDP76964.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_06920;product=hypothetical protein;protein_id=PDP76964.1;transl_table=11 NSLT01000031.1 Genbank gene 21256 22647 . - . ID=gene-CLI76_06925;Name=CLI76_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06925 NSLT01000031.1 Protein Homology CDS 21256 22647 . - 0 ID=cds-PDP76965.1;Parent=gene-CLI76_06925;Dbxref=NCBI_GP:PDP76965.1;Name=PDP76965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874082.1;locus_tag=CLI76_06925;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=PDP76965.1;transl_table=11 NSLT01000031.1 Genbank gene 22951 24447 . + . ID=gene-CLI76_06930;Name=CLI76_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06930 NSLT01000031.1 Protein Homology CDS 22951 24447 . + 0 ID=cds-PDP76966.1;Parent=gene-CLI76_06930;Dbxref=NCBI_GP:PDP76966.1;Name=PDP76966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005634657.1;locus_tag=CLI76_06930;product=acetyl-CoA hydrolase;protein_id=PDP76966.1;transl_table=11 NSLT01000031.1 Genbank gene 24656 24886 . - . ID=gene-CLI76_06935;Name=CLI76_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06935 NSLT01000031.1 GeneMarkS+ CDS 24656 24886 . - 0 ID=cds-PDP76967.1;Parent=gene-CLI76_06935;Dbxref=NCBI_GP:PDP76967.1;Name=PDP76967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_06935;product=hypothetical protein;protein_id=PDP76967.1;transl_table=11 NSLT01000031.1 Genbank pseudogene 24980 26701 . + . ID=gene-CLI76_06940;Name=CLI76_06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_06940;pseudo=true NSLT01000031.1 Protein Homology CDS 24980 26701 . + 0 ID=cds-CLI76_06940;Parent=gene-CLI76_06940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874111.1;locus_tag=CLI76_06940;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000032.1 1 26057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000032.1 Genbank region 1 26057 . + . ID=NSLT01000032.1:1..26057;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000032.1 Genbank gene 1 114 . + . ID=gene-CLI76_06945;Name=CLI76_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06945;partial=true;start_range=.,1 NSLT01000032.1 Protein Homology CDS 1 114 . + 0 ID=cds-PDP76923.1;Parent=gene-CLI76_06945;Dbxref=NCBI_GP:PDP76923.1;Name=PDP76923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_06945;partial=true;product=IS982 family transposase;protein_id=PDP76923.1;start_range=.,1;transl_table=11 NSLT01000032.1 Genbank gene 239 1051 . + . ID=gene-CLI76_06950;Name=CLI76_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06950 NSLT01000032.1 Protein Homology CDS 239 1051 . + 0 ID=cds-PDP76924.1;Parent=gene-CLI76_06950;Dbxref=NCBI_GP:PDP76924.1;Name=PDP76924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584486.1;locus_tag=CLI76_06950;product=outer membrane protein assembly factor BamD;protein_id=PDP76924.1;transl_table=11 NSLT01000032.1 Genbank gene 1193 1525 . + . ID=gene-CLI76_06955;Name=CLI76_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06955 NSLT01000032.1 Protein Homology CDS 1193 1525 . + 0 ID=cds-PDP76925.1;Parent=gene-CLI76_06955;Dbxref=NCBI_GP:PDP76925.1;Name=PDP76925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584487.1;locus_tag=CLI76_06955;product=RNA polymerase Rpb6;protein_id=PDP76925.1;transl_table=11 NSLT01000032.1 Genbank gene 1555 2013 . + . ID=gene-CLI76_06960;Name=CLI76_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06960 NSLT01000032.1 Protein Homology CDS 1555 2013 . + 0 ID=cds-PDP76926.1;Parent=gene-CLI76_06960;Dbxref=NCBI_GP:PDP76926.1;Name=PDP76926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584488.1;locus_tag=CLI76_06960;product=DUF4293 domain-containing protein;protein_id=PDP76926.1;transl_table=11 NSLT01000032.1 Genbank gene 2289 2600 . + . ID=gene-CLI76_06965;Name=CLI76_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06965 NSLT01000032.1 Protein Homology CDS 2289 2600 . + 0 ID=cds-PDP76927.1;Parent=gene-CLI76_06965;Dbxref=NCBI_GP:PDP76927.1;Name=PDP76927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966099.1;locus_tag=CLI76_06965;product=DUF3467 domain-containing protein;protein_id=PDP76927.1;transl_table=11 NSLT01000032.1 Genbank gene 2604 3737 . + . ID=gene-CLI76_06970;Name=CLI76_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06970 NSLT01000032.1 Protein Homology CDS 2604 3737 . + 0 ID=cds-PDP76928.1;Parent=gene-CLI76_06970;Dbxref=NCBI_GP:PDP76928.1;Name=PDP76928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584491.1;locus_tag=CLI76_06970;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=PDP76928.1;transl_table=11 NSLT01000032.1 Genbank gene 3747 4472 . + . ID=gene-CLI76_06975;Name=CLI76_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06975 NSLT01000032.1 Protein Homology CDS 3747 4472 . + 0 ID=cds-PDP76929.1;Parent=gene-CLI76_06975;Dbxref=NCBI_GP:PDP76929.1;Name=PDP76929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584492.1;locus_tag=CLI76_06975;product=oxidoreductase;protein_id=PDP76929.1;transl_table=11 NSLT01000032.1 Genbank gene 5080 5283 . + . ID=gene-CLI76_06980;Name=CLI76_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06980 NSLT01000032.1 Protein Homology CDS 5080 5283 . + 0 ID=cds-PDP76930.1;Parent=gene-CLI76_06980;Dbxref=NCBI_GP:PDP76930.1;Name=PDP76930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458217.1;locus_tag=CLI76_06980;product=hypothetical protein;protein_id=PDP76930.1;transl_table=11 NSLT01000032.1 Genbank gene 5414 6979 . + . ID=gene-CLI76_06985;Name=CLI76_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06985 NSLT01000032.1 Protein Homology CDS 5414 6979 . + 0 ID=cds-PDP76931.1;Parent=gene-CLI76_06985;Dbxref=NCBI_GP:PDP76931.1;Name=PDP76931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458218.1;locus_tag=CLI76_06985;product=lytic transglycosylase F;protein_id=PDP76931.1;transl_table=11 NSLT01000032.1 Genbank gene 7005 8876 . + . ID=gene-CLI76_06990;Name=CLI76_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06990 NSLT01000032.1 Protein Homology CDS 7005 8876 . + 0 ID=cds-PDP76932.1;Parent=gene-CLI76_06990;Dbxref=NCBI_GP:PDP76932.1;Name=PDP76932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965618.1;locus_tag=CLI76_06990;product=ABC transporter ATP-binding protein;protein_id=PDP76932.1;transl_table=11 NSLT01000032.1 Genbank gene 8884 9588 . + . ID=gene-CLI76_06995;Name=CLI76_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_06995 NSLT01000032.1 Protein Homology CDS 8884 9588 . + 0 ID=cds-PDP76933.1;Parent=gene-CLI76_06995;Dbxref=NCBI_GP:PDP76933.1;Name=PDP76933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584497.1;locus_tag=CLI76_06995;product=peptidylprolyl isomerase;protein_id=PDP76933.1;transl_table=11 NSLT01000032.1 Genbank gene 9733 10083 . - . ID=gene-CLI76_07000;Name=CLI76_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07000 NSLT01000032.1 Protein Homology CDS 9733 10083 . - 0 ID=cds-PDP76934.1;Parent=gene-CLI76_07000;Dbxref=NCBI_GP:PDP76934.1;Name=PDP76934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458221.1;locus_tag=CLI76_07000;product=hypothetical protein;protein_id=PDP76934.1;transl_table=11 NSLT01000032.1 Genbank gene 10191 12299 . - . ID=gene-CLI76_07005;Name=CLI76_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07005 NSLT01000032.1 Protein Homology CDS 10191 12299 . - 0 ID=cds-PDP76935.1;Parent=gene-CLI76_07005;Dbxref=NCBI_GP:PDP76935.1;Name=PDP76935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584501.1;locus_tag=CLI76_07005;product=hypothetical protein;protein_id=PDP76935.1;transl_table=11 NSLT01000032.1 Genbank gene 12505 13842 . - . ID=gene-CLI76_07010;Name=CLI76_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07010 NSLT01000032.1 Protein Homology CDS 12505 13842 . - 0 ID=cds-PDP76936.1;Parent=gene-CLI76_07010;Dbxref=NCBI_GP:PDP76936.1;Name=PDP76936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956255.1;locus_tag=CLI76_07010;product=glutamate dehydrogenase;protein_id=PDP76936.1;transl_table=11 NSLT01000032.1 Genbank gene 14532 15488 . - . ID=gene-CLI76_07015;Name=CLI76_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07015 NSLT01000032.1 Protein Homology CDS 14532 15488 . - 0 ID=cds-PDP76937.1;Parent=gene-CLI76_07015;Dbxref=NCBI_GP:PDP76937.1;Name=PDP76937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366250.1;locus_tag=CLI76_07015;product=UDP-glucose 4-epimerase;protein_id=PDP76937.1;transl_table=11 NSLT01000032.1 Genbank gene 15804 16514 . + . ID=gene-CLI76_07020;Name=CLI76_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07020 NSLT01000032.1 Protein Homology CDS 15804 16514 . + 0 ID=cds-PDP76938.1;Parent=gene-CLI76_07020;Dbxref=NCBI_GP:PDP76938.1;Name=PDP76938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458223.1;locus_tag=CLI76_07020;product=cation-binding protein;protein_id=PDP76938.1;transl_table=11 NSLT01000032.1 Genbank gene 16511 17110 . + . ID=gene-CLI76_07025;Name=CLI76_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07025 NSLT01000032.1 Protein Homology CDS 16511 17110 . + 0 ID=cds-PDP76939.1;Parent=gene-CLI76_07025;Dbxref=NCBI_GP:PDP76939.1;Name=PDP76939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458224.1;locus_tag=CLI76_07025;product=DNA-binding response regulator;protein_id=PDP76939.1;transl_table=11 NSLT01000032.1 Genbank gene 17128 17811 . - . ID=gene-CLI76_07030;Name=CLI76_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07030 NSLT01000032.1 Protein Homology CDS 17128 17811 . - 0 ID=cds-PDP76940.1;Parent=gene-CLI76_07030;Dbxref=NCBI_GP:PDP76940.1;Name=PDP76940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874405.1;locus_tag=CLI76_07030;product=pseudouridine synthase;protein_id=PDP76940.1;transl_table=11 NSLT01000032.1 Genbank gene 17855 18601 . - . ID=gene-CLI76_07035;Name=CLI76_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07035 NSLT01000032.1 Protein Homology CDS 17855 18601 . - 0 ID=cds-PDP76941.1;Parent=gene-CLI76_07035;Dbxref=NCBI_GP:PDP76941.1;Name=PDP76941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_101394.1;locus_tag=CLI76_07035;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=PDP76941.1;transl_table=11 NSLT01000032.1 Genbank gene 18685 19320 . - . ID=gene-CLI76_07040;Name=CLI76_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07040 NSLT01000032.1 Protein Homology CDS 18685 19320 . - 0 ID=cds-PDP76942.1;Parent=gene-CLI76_07040;Dbxref=NCBI_GP:PDP76942.1;Name=PDP76942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815979.1;locus_tag=CLI76_07040;product=TetR/AcrR family transcriptional regulator;protein_id=PDP76942.1;transl_table=11 NSLT01000032.1 Genbank gene 19544 19617 . - . ID=gene-CLI76_07045;Name=CLI76_07045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_07045 NSLT01000032.1 tRNAscan-SE tRNA 19544 19617 . - . ID=rna-CLI76_07045;Parent=gene-CLI76_07045;anticodon=(pos:complement(19583..19585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07045;product=tRNA-Gln NSLT01000032.1 tRNAscan-SE exon 19544 19617 . - . ID=exon-CLI76_07045-1;Parent=rna-CLI76_07045;anticodon=(pos:complement(19583..19585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07045;product=tRNA-Gln NSLT01000032.1 Genbank gene 19896 21683 . + . ID=gene-CLI76_07050;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CLI76_07050 NSLT01000032.1 Protein Homology CDS 19896 21683 . + 0 ID=cds-PDP76943.1;Parent=gene-CLI76_07050;Dbxref=NCBI_GP:PDP76943.1;Name=PDP76943.1;gbkey=CDS;gene=lepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004325757.1;locus_tag=CLI76_07050;product=elongation factor 4;protein_id=PDP76943.1;transl_table=11 NSLT01000032.1 Genbank gene 21718 23304 . + . ID=gene-CLI76_07055;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CLI76_07055 NSLT01000032.1 Protein Homology CDS 21718 23304 . + 0 ID=cds-PDP76944.1;Parent=gene-CLI76_07055;Dbxref=NCBI_GP:PDP76944.1;Name=PDP76944.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584511.1;locus_tag=CLI76_07055;product=replicative DNA helicase;protein_id=PDP76944.1;transl_table=11 NSLT01000032.1 Genbank pseudogene 23618 23719 . - . ID=gene-CLI76_07060;Name=CLI76_07060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07060;pseudo=true NSLT01000032.1 Protein Homology CDS 23618 23719 . - 0 ID=cds-CLI76_07060;Parent=gene-CLI76_07060;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_07060;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000032.1 Genbank gene 23769 24854 . - . ID=gene-CLI76_07065;Name=CLI76_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07065 NSLT01000032.1 Protein Homology CDS 23769 24854 . - 0 ID=cds-PDP76945.1;Parent=gene-CLI76_07065;Dbxref=NCBI_GP:PDP76945.1;Name=PDP76945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_07065;product=IS5/IS1182 family transposase;protein_id=PDP76945.1;transl_table=11 NSLT01000032.1 Genbank gene 24959 25138 . - . ID=gene-CLI76_07070;Name=CLI76_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07070 NSLT01000032.1 Protein Homology CDS 24959 25138 . - 0 ID=cds-PDP76946.1;Parent=gene-CLI76_07070;Dbxref=NCBI_GP:PDP76946.1;Name=PDP76946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_07070;product=hypothetical protein;protein_id=PDP76946.1;transl_table=11 NSLT01000032.1 Genbank gene 25268 26057 . - . ID=gene-CLI76_07075;Name=CLI76_07075;end_range=26057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07075;partial=true NSLT01000032.1 Protein Homology CDS 25268 26057 . - 1 ID=cds-PDP76947.1;Parent=gene-CLI76_07075;Dbxref=NCBI_GP:PDP76947.1;Name=PDP76947.1;end_range=26057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_07075;partial=true;product=IS3 family transposase;protein_id=PDP76947.1;transl_table=11 ##sequence-region NSLT01000033.1 1 25338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000033.1 Genbank region 1 25338 . + . ID=NSLT01000033.1:1..25338;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000033.1 Genbank gene 300 376 . - . ID=gene-CLI76_07080;Name=CLI76_07080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_07080 NSLT01000033.1 tRNAscan-SE tRNA 300 376 . - . ID=rna-CLI76_07080;Parent=gene-CLI76_07080;anticodon=(pos:complement(340..342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07080;product=tRNA-Ala NSLT01000033.1 tRNAscan-SE exon 300 376 . - . ID=exon-CLI76_07080-1;Parent=rna-CLI76_07080;anticodon=(pos:complement(340..342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07080;product=tRNA-Ala NSLT01000033.1 Genbank gene 432 827 . - . ID=gene-CLI76_07085;Name=CLI76_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07085 NSLT01000033.1 Protein Homology CDS 432 827 . - 0 ID=cds-PDP76900.1;Parent=gene-CLI76_07085;Dbxref=NCBI_GP:PDP76900.1;Name=PDP76900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964577.1;locus_tag=CLI76_07085;product=GtrA family protein;protein_id=PDP76900.1;transl_table=11 NSLT01000033.1 Genbank gene 793 1548 . - . ID=gene-CLI76_07090;Name=CLI76_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07090 NSLT01000033.1 Protein Homology CDS 793 1548 . - 0 ID=cds-PDP76901.1;Parent=gene-CLI76_07090;Dbxref=NCBI_GP:PDP76901.1;Name=PDP76901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584150.1;locus_tag=CLI76_07090;product=hypothetical protein;protein_id=PDP76901.1;transl_table=11 NSLT01000033.1 Genbank gene 1715 3064 . - . ID=gene-CLI76_07095;Name=CLI76_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07095 NSLT01000033.1 Protein Homology CDS 1715 3064 . - 0 ID=cds-PDP76902.1;Parent=gene-CLI76_07095;Dbxref=NCBI_GP:PDP76902.1;Name=PDP76902.1;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875196.1;locus_tag=CLI76_07095;product=dihydroorotase;protein_id=PDP76902.1;transl_table=11 NSLT01000033.1 Genbank gene 3075 3812 . - . ID=gene-CLI76_07100;Name=CLI76_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07100 NSLT01000033.1 Protein Homology CDS 3075 3812 . - 0 ID=cds-PDP76920.1;Parent=gene-CLI76_07100;Dbxref=NCBI_GP:PDP76920.1;Name=PDP76920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457968.1;locus_tag=CLI76_07100;product=polyprenol monophosphomannose synthase;protein_id=PDP76920.1;transl_table=11 NSLT01000033.1 Genbank gene 3958 5181 . - . ID=gene-CLI76_07105;Name=CLI76_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07105 NSLT01000033.1 Protein Homology CDS 3958 5181 . - 0 ID=cds-PDP76903.1;Parent=gene-CLI76_07105;Dbxref=NCBI_GP:PDP76903.1;Name=PDP76903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815701.1;locus_tag=CLI76_07105;product=ABC transporter permease;protein_id=PDP76903.1;transl_table=11 NSLT01000033.1 Genbank gene 5209 5544 . - . ID=gene-CLI76_07110;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CLI76_07110 NSLT01000033.1 Protein Homology CDS 5209 5544 . - 0 ID=cds-PDP76904.1;Parent=gene-CLI76_07110;Dbxref=NCBI_GP:PDP76904.1;Name=PDP76904.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875201.1;locus_tag=CLI76_07110;product=ribosome-binding factor A;protein_id=PDP76904.1;transl_table=11 NSLT01000033.1 Genbank gene 5583 6398 . - . ID=gene-CLI76_07115;Name=CLI76_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07115 NSLT01000033.1 Protein Homology CDS 5583 6398 . - 0 ID=cds-PDP76905.1;Parent=gene-CLI76_07115;Dbxref=NCBI_GP:PDP76905.1;Name=PDP76905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815702.1;locus_tag=CLI76_07115;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=PDP76905.1;transl_table=11 NSLT01000033.1 Genbank gene 6395 7009 . - . ID=gene-CLI76_07120;Name=CLI76_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07120 NSLT01000033.1 Protein Homology CDS 6395 7009 . - 0 ID=cds-PDP76906.1;Parent=gene-CLI76_07120;Dbxref=NCBI_GP:PDP76906.1;Name=PDP76906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584156.1;locus_tag=CLI76_07120;product=thymidine kinase;protein_id=PDP76906.1;transl_table=11 NSLT01000033.1 Genbank gene 7137 7364 . - . ID=gene-CLI76_07125;Name=CLI76_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07125 NSLT01000033.1 Protein Homology CDS 7137 7364 . - 0 ID=cds-PDP76907.1;Parent=gene-CLI76_07125;Dbxref=NCBI_GP:PDP76907.1;Name=PDP76907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584157.1;locus_tag=CLI76_07125;product=hypothetical protein;protein_id=PDP76907.1;transl_table=11 NSLT01000033.1 Genbank gene 7364 7780 . - . ID=gene-CLI76_07130;Name=CLI76_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07130 NSLT01000033.1 Protein Homology CDS 7364 7780 . - 0 ID=cds-PDP76908.1;Parent=gene-CLI76_07130;Dbxref=NCBI_GP:PDP76908.1;Name=PDP76908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584158.1;locus_tag=CLI76_07130;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=PDP76908.1;transl_table=11 NSLT01000033.1 Genbank gene 7792 9348 . - . ID=gene-CLI76_07135;Name=CLI76_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07135 NSLT01000033.1 Protein Homology CDS 7792 9348 . - 0 ID=cds-PDP76909.1;Parent=gene-CLI76_07135;Dbxref=NCBI_GP:PDP76909.1;Name=PDP76909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584159.1;locus_tag=CLI76_07135;product=two-component system response regulator;protein_id=PDP76909.1;transl_table=11 NSLT01000033.1 Genbank gene 9414 9872 . - . ID=gene-CLI76_07140;Name=CLI76_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07140 NSLT01000033.1 Protein Homology CDS 9414 9872 . - 0 ID=cds-PDP76921.1;Parent=gene-CLI76_07140;Dbxref=NCBI_GP:PDP76921.1;Name=PDP76921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008123311.1;locus_tag=CLI76_07140;product=hypothetical protein;protein_id=PDP76921.1;transl_table=11 NSLT01000033.1 Genbank gene 9975 10364 . - . ID=gene-CLI76_07145;Name=CLI76_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07145 NSLT01000033.1 Protein Homology CDS 9975 10364 . - 0 ID=cds-PDP76910.1;Parent=gene-CLI76_07145;Dbxref=NCBI_GP:PDP76910.1;Name=PDP76910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584161.1;locus_tag=CLI76_07145;product=hypothetical protein;protein_id=PDP76910.1;transl_table=11 NSLT01000033.1 Genbank gene 10372 11013 . - . ID=gene-CLI76_07150;Name=CLI76_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07150 NSLT01000033.1 Protein Homology CDS 10372 11013 . - 0 ID=cds-PDP76911.1;Parent=gene-CLI76_07150;Dbxref=NCBI_GP:PDP76911.1;Name=PDP76911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584162.1;locus_tag=CLI76_07150;product=DNA-binding protein;protein_id=PDP76911.1;transl_table=11 NSLT01000033.1 Genbank gene 11482 12627 . + . ID=gene-CLI76_07155;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CLI76_07155 NSLT01000033.1 Protein Homology CDS 11482 12627 . + 0 ID=cds-PDP76912.1;Parent=gene-CLI76_07155;Dbxref=NCBI_GP:PDP76912.1;Name=PDP76912.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964590.1;locus_tag=CLI76_07155;product=DNA polymerase III subunit delta';protein_id=PDP76912.1;transl_table=11 NSLT01000033.1 Genbank gene 12872 15031 . + . ID=gene-CLI76_07160;Name=CLI76_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07160 NSLT01000033.1 Protein Homology CDS 12872 15031 . + 0 ID=cds-PDP76922.1;Parent=gene-CLI76_07160;Dbxref=NCBI_GP:PDP76922.1;Name=PDP76922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815707.1;locus_tag=CLI76_07160;product=elongation factor G;protein_id=PDP76922.1;transl_table=11 NSLT01000033.1 Genbank gene 15239 17143 . - . ID=gene-CLI76_07165;Name=CLI76_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07165 NSLT01000033.1 Protein Homology CDS 15239 17143 . - 0 ID=cds-PDP76913.1;Parent=gene-CLI76_07165;Dbxref=NCBI_GP:PDP76913.1;Name=PDP76913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457957.1;locus_tag=CLI76_07165;product=YgiQ family radical SAM protein;protein_id=PDP76913.1;transl_table=11 NSLT01000033.1 Genbank gene 17122 17946 . - . ID=gene-CLI76_07170;Name=CLI76_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07170 NSLT01000033.1 Protein Homology CDS 17122 17946 . - 0 ID=cds-PDP76914.1;Parent=gene-CLI76_07170;Dbxref=NCBI_GP:PDP76914.1;Name=PDP76914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875189.1;locus_tag=CLI76_07170;product=4-diphosphocytidyl-2C-methyl-D-erythritol kinase;protein_id=PDP76914.1;transl_table=11 NSLT01000033.1 Genbank gene 17975 19276 . - . ID=gene-CLI76_07175;Name=CLI76_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07175 NSLT01000033.1 Protein Homology CDS 17975 19276 . - 0 ID=cds-PDP76915.1;Parent=gene-CLI76_07175;Dbxref=NCBI_GP:PDP76915.1;Name=PDP76915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964594.1;locus_tag=CLI76_07175;product=NCS2 family permease;protein_id=PDP76915.1;transl_table=11 NSLT01000033.1 Genbank gene 19296 20018 . - . ID=gene-CLI76_07180;Name=CLI76_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07180 NSLT01000033.1 Protein Homology CDS 19296 20018 . - 0 ID=cds-PDP76916.1;Parent=gene-CLI76_07180;Dbxref=NCBI_GP:PDP76916.1;Name=PDP76916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815711.1;locus_tag=CLI76_07180;product=DUF5020 domain-containing protein;protein_id=PDP76916.1;transl_table=11 NSLT01000033.1 Genbank gene 20018 22774 . - . ID=gene-CLI76_07185;Name=CLI76_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07185 NSLT01000033.1 Protein Homology CDS 20018 22774 . - 0 ID=cds-PDP76917.1;Parent=gene-CLI76_07185;Dbxref=NCBI_GP:PDP76917.1;Name=PDP76917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584169.1;locus_tag=CLI76_07185;product=calcium-translocating P-type ATPase%2C PMCA-type;protein_id=PDP76917.1;transl_table=11 NSLT01000033.1 Genbank pseudogene 22953 23078 . - . ID=gene-CLI76_07190;Name=CLI76_07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07190;pseudo=true NSLT01000033.1 Protein Homology CDS 22953 23078 . - 0 ID=cds-CLI76_07190;Parent=gene-CLI76_07190;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874946.1;locus_tag=CLI76_07190;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000033.1 Genbank pseudogene 23103 23645 . - . ID=gene-CLI76_07195;Name=CLI76_07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07195;pseudo=true NSLT01000033.1 Protein Homology CDS 23103 23645 . - 0 ID=cds-CLI76_07195;Parent=gene-CLI76_07195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_07195;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NSLT01000033.1 Genbank gene 24064 24285 . + . ID=gene-CLI76_07200;Name=CLI76_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07200 NSLT01000033.1 Protein Homology CDS 24064 24285 . + 0 ID=cds-PDP76918.1;Parent=gene-CLI76_07200;Dbxref=NCBI_GP:PDP76918.1;Name=PDP76918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816448.1;locus_tag=CLI76_07200;product=DUF1661 domain-containing protein;protein_id=PDP76918.1;transl_table=11 NSLT01000033.1 Genbank gene 24423 25325 . + . ID=gene-CLI76_07205;Name=CLI76_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07205 NSLT01000033.1 Protein Homology CDS 24423 25325 . + 0 ID=cds-PDP76919.1;Parent=gene-CLI76_07205;Dbxref=NCBI_GP:PDP76919.1;Name=PDP76919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_07205;product=IS982 family transposase;protein_id=PDP76919.1;transl_table=11 ##sequence-region NSLT01000034.1 1 25239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000034.1 Genbank region 1 25239 . + . ID=NSLT01000034.1:1..25239;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000034.1 Genbank pseudogene 1 204 . - . ID=gene-CLI76_07210;Name=CLI76_07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07210;pseudo=true NSLT01000034.1 Protein Homology CDS 1 204 . - 0 ID=cds-CLI76_07210;Parent=gene-CLI76_07210;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458561.1;locus_tag=CLI76_07210;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000034.1 Genbank pseudogene 249 727 . - . ID=gene-CLI76_07215;Name=CLI76_07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07215;pseudo=true NSLT01000034.1 Protein Homology CDS 249 727 . - 0 ID=cds-CLI76_07215;Parent=gene-CLI76_07215;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815207.1;locus_tag=CLI76_07215;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000034.1 Genbank gene 763 1200 . - . ID=gene-CLI76_07220;Name=CLI76_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07220 NSLT01000034.1 Protein Homology CDS 763 1200 . - 0 ID=cds-PDP76881.1;Parent=gene-CLI76_07220;Dbxref=NCBI_GP:PDP76881.1;Name=PDP76881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964732.1;locus_tag=CLI76_07220;product=hypothetical protein;protein_id=PDP76881.1;transl_table=11 NSLT01000034.1 Genbank gene 1802 2464 . - . ID=gene-CLI76_07225;Name=CLI76_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07225 NSLT01000034.1 Protein Homology CDS 1802 2464 . - 0 ID=cds-PDP76882.1;Parent=gene-CLI76_07225;Dbxref=NCBI_GP:PDP76882.1;Name=PDP76882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964733.1;locus_tag=CLI76_07225;product=hypothetical protein;protein_id=PDP76882.1;transl_table=11 NSLT01000034.1 Genbank gene 2606 3220 . - . ID=gene-CLI76_07230;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CLI76_07230 NSLT01000034.1 Protein Homology CDS 2606 3220 . - 0 ID=cds-PDP76883.1;Parent=gene-CLI76_07230;Dbxref=NCBI_GP:PDP76883.1;Name=PDP76883.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815202.1;locus_tag=CLI76_07230;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=PDP76883.1;transl_table=11 NSLT01000034.1 Genbank gene 3217 4251 . - . ID=gene-CLI76_07235;Name=CLI76_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07235 NSLT01000034.1 Protein Homology CDS 3217 4251 . - 0 ID=cds-PDP76884.1;Parent=gene-CLI76_07235;Dbxref=NCBI_GP:PDP76884.1;Name=PDP76884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815201.1;locus_tag=CLI76_07235;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=PDP76884.1;transl_table=11 NSLT01000034.1 Genbank gene 4330 5550 . + . ID=gene-CLI76_07240;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CLI76_07240 NSLT01000034.1 Protein Homology CDS 4330 5550 . + 0 ID=cds-PDP76885.1;Parent=gene-CLI76_07240;Dbxref=NCBI_GP:PDP76885.1;Name=PDP76885.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583549.1;locus_tag=CLI76_07240;product=GTPase HflX;protein_id=PDP76885.1;transl_table=11 NSLT01000034.1 Genbank gene 5713 7800 . + . ID=gene-CLI76_07245;Name=CLI76_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07245 NSLT01000034.1 Protein Homology CDS 5713 7800 . + 0 ID=cds-PDP76886.1;Parent=gene-CLI76_07245;Dbxref=NCBI_GP:PDP76886.1;Name=PDP76886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964737.1;locus_tag=CLI76_07245;product=RNA degradosome polyphosphate kinase;protein_id=PDP76886.1;transl_table=11 NSLT01000034.1 Genbank gene 7804 9897 . + . ID=gene-CLI76_07250;Name=CLI76_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07250 NSLT01000034.1 Protein Homology CDS 7804 9897 . + 0 ID=cds-PDP76899.1;Parent=gene-CLI76_07250;Dbxref=NCBI_GP:PDP76899.1;Name=PDP76899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873989.1;locus_tag=CLI76_07250;product=alpha-L-fucosidase;protein_id=PDP76899.1;transl_table=11 NSLT01000034.1 Genbank gene 10849 12291 . - . ID=gene-CLI76_07255;Name=CLI76_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07255 NSLT01000034.1 Protein Homology CDS 10849 12291 . - 0 ID=cds-PDP76887.1;Parent=gene-CLI76_07255;Dbxref=NCBI_GP:PDP76887.1;Name=PDP76887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583544.1;locus_tag=CLI76_07255;product=hypothetical protein;protein_id=PDP76887.1;transl_table=11 NSLT01000034.1 Genbank gene 12324 13334 . - . ID=gene-CLI76_07260;Name=CLI76_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07260 NSLT01000034.1 Protein Homology CDS 12324 13334 . - 0 ID=cds-PDP76888.1;Parent=gene-CLI76_07260;Dbxref=NCBI_GP:PDP76888.1;Name=PDP76888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874832.1;locus_tag=CLI76_07260;product=glycosyl transferase family 2;protein_id=PDP76888.1;transl_table=11 NSLT01000034.1 Genbank gene 13345 14364 . - . ID=gene-CLI76_07265;Name=CLI76_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07265 NSLT01000034.1 Protein Homology CDS 13345 14364 . - 0 ID=cds-PDP76889.1;Parent=gene-CLI76_07265;Dbxref=NCBI_GP:PDP76889.1;Name=PDP76889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874830.1;locus_tag=CLI76_07265;product=patatin;protein_id=PDP76889.1;transl_table=11 NSLT01000034.1 Genbank gene 14415 15887 . - . ID=gene-CLI76_07270;Name=CLI76_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07270 NSLT01000034.1 Protein Homology CDS 14415 15887 . - 0 ID=cds-PDP76890.1;Parent=gene-CLI76_07270;Dbxref=NCBI_GP:PDP76890.1;Name=PDP76890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009129741.1;locus_tag=CLI76_07270;product=cysteine--tRNA ligase;protein_id=PDP76890.1;transl_table=11 NSLT01000034.1 Genbank gene 16018 17376 . + . ID=gene-CLI76_07275;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CLI76_07275 NSLT01000034.1 Protein Homology CDS 16018 17376 . + 0 ID=cds-PDP76891.1;Parent=gene-CLI76_07275;Dbxref=NCBI_GP:PDP76891.1;Name=PDP76891.1;gbkey=CDS;gene=nhaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458544.1;locus_tag=CLI76_07275;product=Na+/H+ antiporter NhaA;protein_id=PDP76891.1;transl_table=11 NSLT01000034.1 Genbank gene 17405 18232 . + . ID=gene-CLI76_07280;Name=CLI76_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07280 NSLT01000034.1 Protein Homology CDS 17405 18232 . + 0 ID=cds-PDP76892.1;Parent=gene-CLI76_07280;Dbxref=NCBI_GP:PDP76892.1;Name=PDP76892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458543.1;locus_tag=CLI76_07280;product=glycerol acyltransferase;protein_id=PDP76892.1;transl_table=11 NSLT01000034.1 Genbank gene 18244 19218 . + . ID=gene-CLI76_07285;Name=CLI76_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07285 NSLT01000034.1 Protein Homology CDS 18244 19218 . + 0 ID=cds-PDP76893.1;Parent=gene-CLI76_07285;Dbxref=NCBI_GP:PDP76893.1;Name=PDP76893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583538.1;locus_tag=CLI76_07285;product=GNAT family N-acetyltransferase;protein_id=PDP76893.1;transl_table=11 NSLT01000034.1 Genbank gene 19205 19612 . + . ID=gene-CLI76_07290;Name=CLI76_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07290 NSLT01000034.1 Protein Homology CDS 19205 19612 . + 0 ID=cds-PDP76894.1;Parent=gene-CLI76_07290;Dbxref=NCBI_GP:PDP76894.1;Name=PDP76894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964518.1;locus_tag=CLI76_07290;product=hypothetical protein;protein_id=PDP76894.1;transl_table=11 NSLT01000034.1 Genbank gene 19954 21933 . + . ID=gene-CLI76_07295;Name=CLI76_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07295 NSLT01000034.1 Protein Homology CDS 19954 21933 . + 0 ID=cds-PDP76895.1;Parent=gene-CLI76_07295;Dbxref=NCBI_GP:PDP76895.1;Name=PDP76895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874825.1;locus_tag=CLI76_07295;product=urocanate hydratase;protein_id=PDP76895.1;transl_table=11 NSLT01000034.1 Genbank gene 22331 22996 . + . ID=gene-CLI76_07300;Name=CLI76_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07300 NSLT01000034.1 Protein Homology CDS 22331 22996 . + 0 ID=cds-PDP76896.1;Parent=gene-CLI76_07300;Dbxref=NCBI_GP:PDP76896.1;Name=PDP76896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815189.1;locus_tag=CLI76_07300;product=ubiquinone biosynthesis methyltransferase UbiE;protein_id=PDP76896.1;transl_table=11 NSLT01000034.1 Genbank gene 23246 23767 . + . ID=gene-CLI76_07305;Name=CLI76_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07305 NSLT01000034.1 Protein Homology CDS 23246 23767 . + 0 ID=cds-PDP76897.1;Parent=gene-CLI76_07305;Dbxref=NCBI_GP:PDP76897.1;Name=PDP76897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874835.1;locus_tag=CLI76_07305;product=hypothetical protein;protein_id=PDP76897.1;transl_table=11 NSLT01000034.1 Genbank gene 24657 25239 . + . ID=gene-CLI76_07310;Name=CLI76_07310;end_range=25239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07310;partial=true NSLT01000034.1 Protein Homology CDS 24657 25239 . + 0 ID=cds-PDP76898.1;Parent=gene-CLI76_07310;Dbxref=NCBI_GP:PDP76898.1;Name=PDP76898.1;end_range=25239,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815187.1;locus_tag=CLI76_07310;partial=true;product=hypothetical protein;protein_id=PDP76898.1;transl_table=11 ##sequence-region NSLT01000035.1 1 24646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000035.1 Genbank region 1 24646 . + . ID=NSLT01000035.1:1..24646;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000035.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_07315;Name=CLI76_07315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07315;pseudo=true NSLT01000035.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_07315;Parent=gene-CLI76_07315;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_07315;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000035.1 Genbank gene 920 1099 . + . ID=gene-CLI76_07320;Name=CLI76_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07320 NSLT01000035.1 Protein Homology CDS 920 1099 . + 0 ID=cds-PDP76859.1;Parent=gene-CLI76_07320;Dbxref=NCBI_GP:PDP76859.1;Name=PDP76859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_07320;product=hypothetical protein;protein_id=PDP76859.1;transl_table=11 NSLT01000035.1 Genbank gene 1204 2289 . + . ID=gene-CLI76_07325;Name=CLI76_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07325 NSLT01000035.1 Protein Homology CDS 1204 2289 . + 0 ID=cds-PDP76860.1;Parent=gene-CLI76_07325;Dbxref=NCBI_GP:PDP76860.1;Name=PDP76860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_07325;product=IS5/IS1182 family transposase;protein_id=PDP76860.1;transl_table=11 NSLT01000035.1 Genbank gene 2339 2467 . + . ID=gene-CLI76_07330;Name=CLI76_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07330 NSLT01000035.1 Protein Homology CDS 2339 2467 . + 0 ID=cds-PDP76879.1;Parent=gene-CLI76_07330;Dbxref=NCBI_GP:PDP76879.1;Name=PDP76879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816552.1;locus_tag=CLI76_07330;product=DNA methylase;protein_id=PDP76879.1;transl_table=11 NSLT01000035.1 Genbank gene 2488 2814 . - . ID=gene-CLI76_07335;Name=CLI76_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07335 NSLT01000035.1 Protein Homology CDS 2488 2814 . - 0 ID=cds-PDP76861.1;Parent=gene-CLI76_07335;Dbxref=NCBI_GP:PDP76861.1;Name=PDP76861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585349.1;locus_tag=CLI76_07335;product=DUF2149 domain-containing protein;protein_id=PDP76861.1;transl_table=11 NSLT01000035.1 Genbank gene 2820 3398 . - . ID=gene-CLI76_07340;Name=CLI76_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07340 NSLT01000035.1 Protein Homology CDS 2820 3398 . - 0 ID=cds-PDP76862.1;Parent=gene-CLI76_07340;Dbxref=NCBI_GP:PDP76862.1;Name=PDP76862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956341.1;locus_tag=CLI76_07340;product=flagellar motor protein MotA;protein_id=PDP76862.1;transl_table=11 NSLT01000035.1 Genbank gene 3468 4145 . - . ID=gene-CLI76_07345;Name=CLI76_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07345 NSLT01000035.1 Protein Homology CDS 3468 4145 . - 0 ID=cds-PDP76863.1;Parent=gene-CLI76_07345;Dbxref=NCBI_GP:PDP76863.1;Name=PDP76863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874682.1;locus_tag=CLI76_07345;product=hypothetical protein;protein_id=PDP76863.1;transl_table=11 NSLT01000035.1 Genbank gene 4142 8551 . - . ID=gene-CLI76_07350;Name=CLI76_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07350 NSLT01000035.1 Protein Homology CDS 4142 8551 . - 0 ID=cds-PDP76864.1;Parent=gene-CLI76_07350;Dbxref=NCBI_GP:PDP76864.1;Name=PDP76864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815631.1;locus_tag=CLI76_07350;product=cobalt chelatase;protein_id=PDP76864.1;transl_table=11 NSLT01000035.1 Genbank gene 8588 10528 . - . ID=gene-CLI76_07355;Name=CLI76_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07355 NSLT01000035.1 Protein Homology CDS 8588 10528 . - 0 ID=cds-PDP76865.1;Parent=gene-CLI76_07355;Dbxref=NCBI_GP:PDP76865.1;Name=PDP76865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874678.1;locus_tag=CLI76_07355;product=TonB-dependent receptor;protein_id=PDP76865.1;transl_table=11 NSLT01000035.1 Genbank gene 10543 11193 . - . ID=gene-CLI76_07360;Name=CLI76_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07360 NSLT01000035.1 Protein Homology CDS 10543 11193 . - 0 ID=cds-PDP76866.1;Parent=gene-CLI76_07360;Dbxref=NCBI_GP:PDP76866.1;Name=PDP76866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964857.1;locus_tag=CLI76_07360;product=heme-binding protein HmuY;protein_id=PDP76866.1;transl_table=11 NSLT01000035.1 Genbank gene 11379 11558 . + . ID=gene-CLI76_07365;Name=CLI76_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07365 NSLT01000035.1 Protein Homology CDS 11379 11558 . + 0 ID=cds-PDP76867.1;Parent=gene-CLI76_07365;Dbxref=NCBI_GP:PDP76867.1;Name=PDP76867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873904.1;locus_tag=CLI76_07365;product=hypothetical protein;protein_id=PDP76867.1;transl_table=11 NSLT01000035.1 Genbank gene 12046 14520 . - . ID=gene-CLI76_07370;Name=CLI76_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07370 NSLT01000035.1 Protein Homology CDS 12046 14520 . - 0 ID=cds-PDP76868.1;Parent=gene-CLI76_07370;Dbxref=NCBI_GP:PDP76868.1;Name=PDP76868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964858.1;locus_tag=CLI76_07370;product=serine protease;protein_id=PDP76868.1;transl_table=11 NSLT01000035.1 Genbank gene 14713 14789 . - . ID=gene-CLI76_07375;Name=CLI76_07375;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_07375 NSLT01000035.1 tRNAscan-SE tRNA 14713 14789 . - . ID=rna-CLI76_07375;Parent=gene-CLI76_07375;anticodon=(pos:complement(14753..14755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07375;product=tRNA-Arg NSLT01000035.1 tRNAscan-SE exon 14713 14789 . - . ID=exon-CLI76_07375-1;Parent=rna-CLI76_07375;anticodon=(pos:complement(14753..14755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07375;product=tRNA-Arg NSLT01000035.1 Genbank gene 14955 15101 . - . ID=gene-CLI76_07380;Name=CLI76_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07380 NSLT01000035.1 Protein Homology CDS 14955 15101 . - 0 ID=cds-PDP76869.1;Parent=gene-CLI76_07380;Dbxref=NCBI_GP:PDP76869.1;Name=PDP76869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_07380;product=DUF1661 domain-containing protein;protein_id=PDP76869.1;transl_table=11 NSLT01000035.1 Genbank gene 15334 15909 . - . ID=gene-CLI76_07385;Name=CLI76_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07385 NSLT01000035.1 Protein Homology CDS 15334 15909 . - 0 ID=cds-PDP76870.1;Parent=gene-CLI76_07385;Dbxref=NCBI_GP:PDP76870.1;Name=PDP76870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585361.1;locus_tag=CLI76_07385;product=superoxide dismutase [Mn/Fe];protein_id=PDP76870.1;transl_table=11 NSLT01000035.1 Genbank gene 16047 16817 . - . ID=gene-CLI76_07390;Name=CLI76_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07390 NSLT01000035.1 Protein Homology CDS 16047 16817 . - 0 ID=cds-PDP76871.1;Parent=gene-CLI76_07390;Dbxref=NCBI_GP:PDP76871.1;Name=PDP76871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585362.1;locus_tag=CLI76_07390;product=peroxide stress protein YaaA;protein_id=PDP76871.1;transl_table=11 NSLT01000035.1 Genbank gene 16902 17321 . - . ID=gene-CLI76_07395;Name=CLI76_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07395 NSLT01000035.1 Protein Homology CDS 16902 17321 . - 0 ID=cds-PDP76872.1;Parent=gene-CLI76_07395;Dbxref=NCBI_GP:PDP76872.1;Name=PDP76872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585363.1;locus_tag=CLI76_07395;product=thioesterase;protein_id=PDP76872.1;transl_table=11 NSLT01000035.1 Genbank gene 17377 18621 . - . ID=gene-CLI76_07400;Name=CLI76_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07400 NSLT01000035.1 Protein Homology CDS 17377 18621 . - 0 ID=cds-PDP76880.1;Parent=gene-CLI76_07400;Dbxref=NCBI_GP:PDP76880.1;Name=PDP76880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964435.1;locus_tag=CLI76_07400;product=collagenase-like protease;protein_id=PDP76880.1;transl_table=11 NSLT01000035.1 Genbank gene 18634 19077 . - . ID=gene-CLI76_07405;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CLI76_07405 NSLT01000035.1 Protein Homology CDS 18634 19077 . - 0 ID=cds-PDP76873.1;Parent=gene-CLI76_07405;Dbxref=NCBI_GP:PDP76873.1;Name=PDP76873.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585365.1;locus_tag=CLI76_07405;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=PDP76873.1;transl_table=11 NSLT01000035.1 Genbank gene 19080 20132 . - . ID=gene-CLI76_07410;Name=CLI76_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07410 NSLT01000035.1 Protein Homology CDS 19080 20132 . - 0 ID=cds-PDP76874.1;Parent=gene-CLI76_07410;Dbxref=NCBI_GP:PDP76874.1;Name=PDP76874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815637.1;locus_tag=CLI76_07410;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=PDP76874.1;transl_table=11 NSLT01000035.1 Genbank gene 20150 20926 . - . ID=gene-CLI76_07415;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CLI76_07415 NSLT01000035.1 Protein Homology CDS 20150 20926 . - 0 ID=cds-PDP76875.1;Parent=gene-CLI76_07415;Dbxref=NCBI_GP:PDP76875.1;Name=PDP76875.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874636.1;locus_tag=CLI76_07415;product=tRNA pseudouridine(55) synthase TruB;protein_id=PDP76875.1;transl_table=11 NSLT01000035.1 Genbank gene 20936 21778 . - . ID=gene-CLI76_07420;Name=CLI76_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07420 NSLT01000035.1 Protein Homology CDS 20936 21778 . - 0 ID=cds-PDP76876.1;Parent=gene-CLI76_07420;Dbxref=NCBI_GP:PDP76876.1;Name=PDP76876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457608.1;locus_tag=CLI76_07420;product=undecaprenyl-diphosphatase;protein_id=PDP76876.1;transl_table=11 NSLT01000035.1 Genbank gene 21886 22113 . - . ID=gene-CLI76_07425;Name=CLI76_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07425 NSLT01000035.1 Protein Homology CDS 21886 22113 . - 0 ID=cds-PDP76877.1;Parent=gene-CLI76_07425;Dbxref=NCBI_GP:PDP76877.1;Name=PDP76877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815640.1;locus_tag=CLI76_07425;product=DUF3098 domain-containing protein;protein_id=PDP76877.1;transl_table=11 NSLT01000035.1 Genbank gene 22160 22987 . - . ID=gene-CLI76_07430;Name=CLI76_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07430 NSLT01000035.1 Protein Homology CDS 22160 22987 . - 0 ID=cds-PDP76878.1;Parent=gene-CLI76_07430;Dbxref=NCBI_GP:PDP76878.1;Name=PDP76878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874648.1;locus_tag=CLI76_07430;product=cell division protein FtsX;protein_id=PDP76878.1;transl_table=11 ##sequence-region NSLT01000036.1 1 24109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000036.1 Genbank region 1 24109 . + . ID=NSLT01000036.1:1..24109;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000036.1 Genbank gene 487 1053 . + . ID=gene-CLI76_07435;Name=CLI76_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07435 NSLT01000036.1 Protein Homology CDS 487 1053 . + 0 ID=cds-PDP76856.1;Parent=gene-CLI76_07435;Dbxref=NCBI_GP:PDP76856.1;Name=PDP76856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873412.1;locus_tag=CLI76_07435;product=RNA polymerase subunit sigma-70;protein_id=PDP76856.1;transl_table=11 NSLT01000036.1 Genbank gene 1101 1511 . + . ID=gene-CLI76_07440;Name=CLI76_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07440 NSLT01000036.1 Protein Homology CDS 1101 1511 . + 0 ID=cds-PDP76857.1;Parent=gene-CLI76_07440;Dbxref=NCBI_GP:PDP76857.1;Name=PDP76857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873417.1;locus_tag=CLI76_07440;product=hypothetical protein;protein_id=PDP76857.1;transl_table=11 NSLT01000036.1 Genbank gene 1484 2014 . + . ID=gene-CLI76_07445;Name=CLI76_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07445 NSLT01000036.1 Protein Homology CDS 1484 2014 . + 0 ID=cds-PDP76838.1;Parent=gene-CLI76_07445;Dbxref=NCBI_GP:PDP76838.1;Name=PDP76838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873416.1;locus_tag=CLI76_07445;product=hypothetical protein;protein_id=PDP76838.1;transl_table=11 NSLT01000036.1 Genbank gene 2065 2637 . + . ID=gene-CLI76_07450;Name=CLI76_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07450 NSLT01000036.1 Protein Homology CDS 2065 2637 . + 0 ID=cds-PDP76839.1;Parent=gene-CLI76_07450;Dbxref=NCBI_GP:PDP76839.1;Name=PDP76839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816670.1;locus_tag=CLI76_07450;product=peptidylprolyl isomerase;protein_id=PDP76839.1;transl_table=11 NSLT01000036.1 Genbank gene 2787 3893 . + . ID=gene-CLI76_07455;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CLI76_07455 NSLT01000036.1 Protein Homology CDS 2787 3893 . + 0 ID=cds-PDP76858.1;Parent=gene-CLI76_07455;Dbxref=NCBI_GP:PDP76858.1;Name=PDP76858.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458031.1;locus_tag=CLI76_07455;product=chorismate synthase;protein_id=PDP76858.1;transl_table=11 NSLT01000036.1 Genbank gene 4119 4193 . - . ID=gene-CLI76_07460;Name=CLI76_07460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_07460 NSLT01000036.1 tRNAscan-SE tRNA 4119 4193 . - . ID=rna-CLI76_07460;Parent=gene-CLI76_07460;anticodon=(pos:complement(4158..4160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07460;product=tRNA-Arg NSLT01000036.1 tRNAscan-SE exon 4119 4193 . - . ID=exon-CLI76_07460-1;Parent=rna-CLI76_07460;anticodon=(pos:complement(4158..4160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07460;product=tRNA-Arg NSLT01000036.1 Genbank gene 4266 5924 . - . ID=gene-CLI76_07465;Name=CLI76_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07465 NSLT01000036.1 Protein Homology CDS 4266 5924 . - 0 ID=cds-PDP76840.1;Parent=gene-CLI76_07465;Dbxref=NCBI_GP:PDP76840.1;Name=PDP76840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965690.1;locus_tag=CLI76_07465;product=dipeptidase;protein_id=PDP76840.1;transl_table=11 NSLT01000036.1 Genbank gene 6602 6748 . + . ID=gene-CLI76_07470;Name=CLI76_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07470 NSLT01000036.1 Protein Homology CDS 6602 6748 . + 0 ID=cds-PDP76841.1;Parent=gene-CLI76_07470;Dbxref=NCBI_GP:PDP76841.1;Name=PDP76841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815258.1;locus_tag=CLI76_07470;product=hypothetical protein;protein_id=PDP76841.1;transl_table=11 NSLT01000036.1 Genbank gene 7133 8320 . - . ID=gene-CLI76_07475;Name=CLI76_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07475 NSLT01000036.1 Protein Homology CDS 7133 8320 . - 0 ID=cds-PDP76842.1;Parent=gene-CLI76_07475;Dbxref=NCBI_GP:PDP76842.1;Name=PDP76842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585548.1;locus_tag=CLI76_07475;product=capsule biosynthesis protein CapA;protein_id=PDP76842.1;transl_table=11 NSLT01000036.1 Genbank gene 8330 8824 . - . ID=gene-CLI76_07480;Name=CLI76_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07480 NSLT01000036.1 Protein Homology CDS 8330 8824 . - 0 ID=cds-PDP76843.1;Parent=gene-CLI76_07480;Dbxref=NCBI_GP:PDP76843.1;Name=PDP76843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458027.1;locus_tag=CLI76_07480;product=phosphodiesterase;protein_id=PDP76843.1;transl_table=11 NSLT01000036.1 Genbank gene 8859 9521 . - . ID=gene-CLI76_07485;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CLI76_07485 NSLT01000036.1 Protein Homology CDS 8859 9521 . - 0 ID=cds-PDP76844.1;Parent=gene-CLI76_07485;Dbxref=NCBI_GP:PDP76844.1;Name=PDP76844.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956277.1;locus_tag=CLI76_07485;product=7-cyano-7-deazaguanine synthase QueC;protein_id=PDP76844.1;transl_table=11 NSLT01000036.1 Genbank gene 9927 10772 . + . ID=gene-CLI76_07490;Name=CLI76_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07490 NSLT01000036.1 Protein Homology CDS 9927 10772 . + 0 ID=cds-PDP76845.1;Parent=gene-CLI76_07490;Dbxref=NCBI_GP:PDP76845.1;Name=PDP76845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956276.1;locus_tag=CLI76_07490;product=DUF3298 domain-containing protein;protein_id=PDP76845.1;transl_table=11 NSLT01000036.1 Genbank gene 10797 11471 . + . ID=gene-CLI76_07495;Name=CLI76_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07495 NSLT01000036.1 Protein Homology CDS 10797 11471 . + 0 ID=cds-PDP76846.1;Parent=gene-CLI76_07495;Dbxref=NCBI_GP:PDP76846.1;Name=PDP76846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964420.1;locus_tag=CLI76_07495;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=PDP76846.1;transl_table=11 NSLT01000036.1 Genbank gene 11468 12112 . + . ID=gene-CLI76_07500;Name=CLI76_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07500 NSLT01000036.1 Protein Homology CDS 11468 12112 . + 0 ID=cds-PDP76847.1;Parent=gene-CLI76_07500;Dbxref=NCBI_GP:PDP76847.1;Name=PDP76847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964421.1;locus_tag=CLI76_07500;product=MBL fold hydrolase;protein_id=PDP76847.1;transl_table=11 NSLT01000036.1 Genbank gene 12117 14984 . + . ID=gene-CLI76_07505;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CLI76_07505 NSLT01000036.1 Protein Homology CDS 12117 14984 . + 0 ID=cds-PDP76848.1;Parent=gene-CLI76_07505;Dbxref=NCBI_GP:PDP76848.1;Name=PDP76848.1;gbkey=CDS;gene=gcvP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816680.1;locus_tag=CLI76_07505;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=PDP76848.1;transl_table=11 NSLT01000036.1 Genbank gene 15187 16518 . + . ID=gene-CLI76_07510;Name=CLI76_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07510 NSLT01000036.1 Protein Homology CDS 15187 16518 . + 0 ID=cds-PDP76849.1;Parent=gene-CLI76_07510;Dbxref=NCBI_GP:PDP76849.1;Name=PDP76849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458021.1;locus_tag=CLI76_07510;product=DUF3078 domain-containing protein;protein_id=PDP76849.1;transl_table=11 NSLT01000036.1 Genbank gene 16535 17950 . - . ID=gene-CLI76_07515;Name=CLI76_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07515 NSLT01000036.1 Protein Homology CDS 16535 17950 . - 0 ID=cds-PDP76850.1;Parent=gene-CLI76_07515;Dbxref=NCBI_GP:PDP76850.1;Name=PDP76850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585557.1;locus_tag=CLI76_07515;product=helicase;protein_id=PDP76850.1;transl_table=11 NSLT01000036.1 Genbank gene 18082 18714 . + . ID=gene-CLI76_07520;Name=CLI76_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07520 NSLT01000036.1 Protein Homology CDS 18082 18714 . + 0 ID=cds-PDP76851.1;Parent=gene-CLI76_07520;Dbxref=NCBI_GP:PDP76851.1;Name=PDP76851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964425.1;locus_tag=CLI76_07520;product=hypothetical protein;protein_id=PDP76851.1;transl_table=11 NSLT01000036.1 Genbank gene 18732 19547 . + . ID=gene-CLI76_07525;Name=CLI76_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07525 NSLT01000036.1 Protein Homology CDS 18732 19547 . + 0 ID=cds-PDP76852.1;Parent=gene-CLI76_07525;Dbxref=NCBI_GP:PDP76852.1;Name=PDP76852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874850.1;locus_tag=CLI76_07525;product=DUF3822 domain-containing protein;protein_id=PDP76852.1;transl_table=11 NSLT01000036.1 Genbank gene 19584 20123 . + . ID=gene-CLI76_07530;Name=CLI76_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07530 NSLT01000036.1 Protein Homology CDS 19584 20123 . + 0 ID=cds-PDP76853.1;Parent=gene-CLI76_07530;Dbxref=NCBI_GP:PDP76853.1;Name=PDP76853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458018.1;locus_tag=CLI76_07530;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=PDP76853.1;transl_table=11 NSLT01000036.1 Genbank gene 20972 22771 . - . ID=gene-CLI76_07535;Name=CLI76_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07535 NSLT01000036.1 Protein Homology CDS 20972 22771 . - 0 ID=cds-PDP76854.1;Parent=gene-CLI76_07535;Dbxref=NCBI_GP:PDP76854.1;Name=PDP76854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964428.1;locus_tag=CLI76_07535;product=30S ribosomal protein S1;protein_id=PDP76854.1;transl_table=11 NSLT01000036.1 Genbank gene 23320 24109 . - . ID=gene-CLI76_07540;Name=CLI76_07540;end_range=24109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07540;partial=true NSLT01000036.1 Protein Homology CDS 23320 24109 . - 1 ID=cds-PDP76855.1;Parent=gene-CLI76_07540;Dbxref=NCBI_GP:PDP76855.1;Name=PDP76855.1;end_range=24109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_07540;partial=true;product=IS3 family transposase;protein_id=PDP76855.1;transl_table=11 ##sequence-region NSLT01000037.1 1 23670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000037.1 Genbank region 1 23670 . + . ID=NSLT01000037.1:1..23670;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000037.1 Genbank gene 141 389 . - . ID=gene-CLI76_07545;Name=CLI76_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07545 NSLT01000037.1 Protein Homology CDS 141 389 . - 0 ID=cds-PDP76810.1;Parent=gene-CLI76_07545;Dbxref=NCBI_GP:PDP76810.1;Name=PDP76810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816302.1;locus_tag=CLI76_07545;product=hypothetical protein;protein_id=PDP76810.1;transl_table=11 NSLT01000037.1 Genbank gene 474 665 . + . ID=gene-CLI76_07550;Name=CLI76_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07550 NSLT01000037.1 GeneMarkS+ CDS 474 665 . + 0 ID=cds-PDP76811.1;Parent=gene-CLI76_07550;Dbxref=NCBI_GP:PDP76811.1;Name=PDP76811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07550;product=hypothetical protein;protein_id=PDP76811.1;transl_table=11 NSLT01000037.1 Genbank gene 662 3193 . - . ID=gene-CLI76_07555;Name=CLI76_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07555 NSLT01000037.1 Protein Homology CDS 662 3193 . - 0 ID=cds-PDP76812.1;Parent=gene-CLI76_07555;Dbxref=NCBI_GP:PDP76812.1;Name=PDP76812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816578.1;locus_tag=CLI76_07555;product=peptidase C10;protein_id=PDP76812.1;transl_table=11 NSLT01000037.1 Genbank gene 3333 3818 . - . ID=gene-CLI76_07560;Name=CLI76_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07560 NSLT01000037.1 Protein Homology CDS 3333 3818 . - 0 ID=cds-PDP76813.1;Parent=gene-CLI76_07560;Dbxref=NCBI_GP:PDP76813.1;Name=PDP76813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873785.1;locus_tag=CLI76_07560;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=PDP76813.1;transl_table=11 NSLT01000037.1 Genbank gene 3910 4596 . - . ID=gene-CLI76_07565;Name=CLI76_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07565 NSLT01000037.1 Protein Homology CDS 3910 4596 . - 0 ID=cds-PDP76814.1;Parent=gene-CLI76_07565;Dbxref=NCBI_GP:PDP76814.1;Name=PDP76814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585427.1;locus_tag=CLI76_07565;product=anaphase-promoting protein;protein_id=PDP76814.1;transl_table=11 NSLT01000037.1 Genbank gene 4783 5460 . - . ID=gene-CLI76_07570;Name=CLI76_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07570 NSLT01000037.1 Protein Homology CDS 4783 5460 . - 0 ID=cds-PDP76815.1;Parent=gene-CLI76_07570;Dbxref=NCBI_GP:PDP76815.1;Name=PDP76815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457866.1;locus_tag=CLI76_07570;product=DNA-binding response regulator;protein_id=PDP76815.1;transl_table=11 NSLT01000037.1 Genbank gene 5473 7281 . - . ID=gene-CLI76_07575;Name=CLI76_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07575 NSLT01000037.1 Protein Homology CDS 5473 7281 . - 0 ID=cds-PDP76816.1;Parent=gene-CLI76_07575;Dbxref=NCBI_GP:PDP76816.1;Name=PDP76816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585425.1;locus_tag=CLI76_07575;product=histidine kinase;protein_id=PDP76816.1;transl_table=11 NSLT01000037.1 Genbank gene 7676 7870 . + . ID=gene-CLI76_07580;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CLI76_07580 NSLT01000037.1 Protein Homology CDS 7676 7870 . + 0 ID=cds-PDP76817.1;Parent=gene-CLI76_07580;Dbxref=NCBI_GP:PDP76817.1;Name=PDP76817.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585424.1;locus_tag=CLI76_07580;product=exodeoxyribonuclease VII small subunit;protein_id=PDP76817.1;transl_table=11 NSLT01000037.1 Genbank gene 7867 8535 . + . ID=gene-CLI76_07585;Name=CLI76_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07585 NSLT01000037.1 Protein Homology CDS 7867 8535 . + 0 ID=cds-PDP76818.1;Parent=gene-CLI76_07585;Dbxref=NCBI_GP:PDP76818.1;Name=PDP76818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585423.1;locus_tag=CLI76_07585;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=PDP76818.1;transl_table=11 NSLT01000037.1 Genbank gene 8764 8840 . + . ID=gene-CLI76_07590;Name=CLI76_07590;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_07590 NSLT01000037.1 tRNAscan-SE tRNA 8764 8840 . + . ID=rna-CLI76_07590;Parent=gene-CLI76_07590;anticodon=(pos:8798..8800);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07590;product=tRNA-Asp NSLT01000037.1 tRNAscan-SE exon 8764 8840 . + . ID=exon-CLI76_07590-1;Parent=rna-CLI76_07590;anticodon=(pos:8798..8800);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_07590;product=tRNA-Asp NSLT01000037.1 Genbank gene 9148 10380 . + . ID=gene-CLI76_07595;Name=CLI76_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07595 NSLT01000037.1 Protein Homology CDS 9148 10380 . + 0 ID=cds-PDP76819.1;Parent=gene-CLI76_07595;Dbxref=NCBI_GP:PDP76819.1;Name=PDP76819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816574.1;locus_tag=CLI76_07595;product=recombinase;protein_id=PDP76819.1;transl_table=11 NSLT01000037.1 Genbank gene 10416 10949 . + . ID=gene-CLI76_07600;Name=CLI76_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07600 NSLT01000037.1 Protein Homology CDS 10416 10949 . + 0 ID=cds-PDP76820.1;Parent=gene-CLI76_07600;Dbxref=NCBI_GP:PDP76820.1;Name=PDP76820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226323.1;locus_tag=CLI76_07600;product=DNA-binding protein;protein_id=PDP76820.1;transl_table=11 NSLT01000037.1 Genbank gene 10976 11434 . + . ID=gene-CLI76_07605;Name=CLI76_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07605 NSLT01000037.1 Protein Homology CDS 10976 11434 . + 0 ID=cds-PDP76821.1;Parent=gene-CLI76_07605;Dbxref=NCBI_GP:PDP76821.1;Name=PDP76821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585420.1;locus_tag=CLI76_07605;product=DUF1896 domain-containing protein;protein_id=PDP76821.1;transl_table=11 NSLT01000037.1 Genbank gene 11794 12153 . + . ID=gene-CLI76_07610;Name=CLI76_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07610 NSLT01000037.1 Protein Homology CDS 11794 12153 . + 0 ID=cds-PDP76822.1;Parent=gene-CLI76_07610;Dbxref=NCBI_GP:PDP76822.1;Name=PDP76822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956319.1;locus_tag=CLI76_07610;product=hypothetical protein;protein_id=PDP76822.1;transl_table=11 NSLT01000037.1 Genbank gene 12160 12681 . + . ID=gene-CLI76_07615;Name=CLI76_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07615 NSLT01000037.1 Protein Homology CDS 12160 12681 . + 0 ID=cds-PDP76823.1;Parent=gene-CLI76_07615;Dbxref=NCBI_GP:PDP76823.1;Name=PDP76823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874665.1;locus_tag=CLI76_07615;product=hypothetical protein;protein_id=PDP76823.1;transl_table=11 NSLT01000037.1 Genbank gene 12694 12921 . + . ID=gene-CLI76_07620;Name=CLI76_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07620 NSLT01000037.1 Protein Homology CDS 12694 12921 . + 0 ID=cds-PDP76824.1;Parent=gene-CLI76_07620;Dbxref=NCBI_GP:PDP76824.1;Name=PDP76824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874553.1;locus_tag=CLI76_07620;product=hypothetical protein;protein_id=PDP76824.1;transl_table=11 NSLT01000037.1 Genbank gene 12944 13225 . + . ID=gene-CLI76_07625;Name=CLI76_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07625 NSLT01000037.1 Protein Homology CDS 12944 13225 . + 0 ID=cds-PDP76825.1;Parent=gene-CLI76_07625;Dbxref=NCBI_GP:PDP76825.1;Name=PDP76825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585415.1;locus_tag=CLI76_07625;product=hypothetical protein;protein_id=PDP76825.1;transl_table=11 NSLT01000037.1 Genbank gene 13238 13471 . + . ID=gene-CLI76_07630;Name=CLI76_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07630 NSLT01000037.1 Protein Homology CDS 13238 13471 . + 0 ID=cds-PDP76826.1;Parent=gene-CLI76_07630;Dbxref=NCBI_GP:PDP76826.1;Name=PDP76826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874640.1;locus_tag=CLI76_07630;product=hypothetical protein;protein_id=PDP76826.1;transl_table=11 NSLT01000037.1 Genbank gene 13838 14482 . + . ID=gene-CLI76_07635;Name=CLI76_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07635 NSLT01000037.1 Protein Homology CDS 13838 14482 . + 0 ID=cds-PDP76827.1;Parent=gene-CLI76_07635;Dbxref=NCBI_GP:PDP76827.1;Name=PDP76827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816567.1;locus_tag=CLI76_07635;product=hypothetical protein;protein_id=PDP76827.1;transl_table=11 NSLT01000037.1 Genbank gene 14479 15051 . + . ID=gene-CLI76_07640;Name=CLI76_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07640 NSLT01000037.1 Protein Homology CDS 14479 15051 . + 0 ID=cds-PDP76828.1;Parent=gene-CLI76_07640;Dbxref=NCBI_GP:PDP76828.1;Name=PDP76828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816566.1;locus_tag=CLI76_07640;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=PDP76828.1;transl_table=11 NSLT01000037.1 Genbank gene 15205 16107 . + . ID=gene-CLI76_07645;Name=CLI76_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07645 NSLT01000037.1 Protein Homology CDS 15205 16107 . + 0 ID=cds-PDP76829.1;Parent=gene-CLI76_07645;Dbxref=NCBI_GP:PDP76829.1;Name=PDP76829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_07645;product=IS982 family transposase IS195;protein_id=PDP76829.1;transl_table=11 NSLT01000037.1 Genbank gene 16143 16757 . + . ID=gene-CLI76_07650;Name=CLI76_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07650 NSLT01000037.1 Protein Homology CDS 16143 16757 . + 0 ID=cds-PDP76830.1;Parent=gene-CLI76_07650;Dbxref=NCBI_GP:PDP76830.1;Name=PDP76830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226318.1;locus_tag=CLI76_07650;product=SAM-dependent methyltransferase;protein_id=PDP76830.1;transl_table=11 NSLT01000037.1 Genbank pseudogene 16798 17313 . + . ID=gene-CLI76_07655;Name=CLI76_07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07655;pseudo=true NSLT01000037.1 Protein Homology CDS 16798 17313 . + 0 ID=cds-CLI76_07655;Parent=gene-CLI76_07655;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226317.1;locus_tag=CLI76_07655;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000037.1 Genbank gene 17417 20296 . + . ID=gene-CLI76_07660;Name=CLI76_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07660 NSLT01000037.1 GeneMarkS+ CDS 17417 20296 . + 0 ID=cds-PDP76831.1;Parent=gene-CLI76_07660;Dbxref=NCBI_GP:PDP76831.1;Name=PDP76831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07660;product=hypothetical protein;protein_id=PDP76831.1;transl_table=11 NSLT01000037.1 Genbank gene 20300 21001 . + . ID=gene-CLI76_07665;Name=CLI76_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07665 NSLT01000037.1 GeneMarkS+ CDS 20300 21001 . + 0 ID=cds-PDP76832.1;Parent=gene-CLI76_07665;Dbxref=NCBI_GP:PDP76832.1;Name=PDP76832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07665;product=hypothetical protein;protein_id=PDP76832.1;transl_table=11 NSLT01000037.1 Genbank gene 21009 21680 . + . ID=gene-CLI76_07670;Name=CLI76_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07670 NSLT01000037.1 GeneMarkS+ CDS 21009 21680 . + 0 ID=cds-PDP76833.1;Parent=gene-CLI76_07670;Dbxref=NCBI_GP:PDP76833.1;Name=PDP76833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07670;product=hypothetical protein;protein_id=PDP76833.1;transl_table=11 NSLT01000037.1 Genbank gene 21693 22037 . + . ID=gene-CLI76_07675;Name=CLI76_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07675 NSLT01000037.1 Protein Homology CDS 21693 22037 . + 0 ID=cds-PDP76834.1;Parent=gene-CLI76_07675;Dbxref=NCBI_GP:PDP76834.1;Name=PDP76834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14107.4;locus_tag=CLI76_07675;product=hypothetical protein;protein_id=PDP76834.1;transl_table=11 NSLT01000037.1 Genbank gene 22237 22704 . + . ID=gene-CLI76_07680;Name=CLI76_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07680 NSLT01000037.1 Protein Homology CDS 22237 22704 . + 0 ID=cds-PDP76835.1;Parent=gene-CLI76_07680;Dbxref=NCBI_GP:PDP76835.1;Name=PDP76835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874616.1;locus_tag=CLI76_07680;product=PH domain protein;protein_id=PDP76835.1;transl_table=11 NSLT01000037.1 Genbank gene 22739 23386 . + . ID=gene-CLI76_07685;Name=CLI76_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07685 NSLT01000037.1 Protein Homology CDS 22739 23386 . + 0 ID=cds-PDP76836.1;Parent=gene-CLI76_07685;Dbxref=NCBI_GP:PDP76836.1;Name=PDP76836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816561.1;locus_tag=CLI76_07685;product=hypothetical protein;protein_id=PDP76836.1;transl_table=11 NSLT01000037.1 Genbank gene 23417 23670 . - . ID=gene-CLI76_07690;Name=CLI76_07690;end_range=23670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07690;partial=true NSLT01000037.1 Protein Homology CDS 23417 23670 . - 2 ID=cds-PDP76837.1;Parent=gene-CLI76_07690;Dbxref=NCBI_GP:PDP76837.1;Name=PDP76837.1;end_range=23670,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874645.1;locus_tag=CLI76_07690;partial=true;product=conjugal transfer protein;protein_id=PDP76837.1;transl_table=11 ##sequence-region NSLT01000038.1 1 22401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000038.1 Genbank region 1 22401 . + . ID=NSLT01000038.1:1..22401;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000038.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_07695;Name=CLI76_07695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07695;pseudo=true NSLT01000038.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_07695;Parent=gene-CLI76_07695;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_07695;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000038.1 Genbank gene 920 1099 . + . ID=gene-CLI76_07700;Name=CLI76_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07700 NSLT01000038.1 Protein Homology CDS 920 1099 . + 0 ID=cds-PDP76791.1;Parent=gene-CLI76_07700;Dbxref=NCBI_GP:PDP76791.1;Name=PDP76791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_07700;product=hypothetical protein;protein_id=PDP76791.1;transl_table=11 NSLT01000038.1 Genbank gene 1204 2289 . + . ID=gene-CLI76_07705;Name=CLI76_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07705 NSLT01000038.1 Protein Homology CDS 1204 2289 . + 0 ID=cds-PDP76792.1;Parent=gene-CLI76_07705;Dbxref=NCBI_GP:PDP76792.1;Name=PDP76792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_07705;product=IS5/IS1182 family transposase;protein_id=PDP76792.1;transl_table=11 NSLT01000038.1 Genbank gene 2339 2461 . + . ID=gene-CLI76_07710;Name=CLI76_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07710 NSLT01000038.1 Protein Homology CDS 2339 2461 . + 0 ID=cds-PDP76808.1;Parent=gene-CLI76_07710;Dbxref=NCBI_GP:PDP76808.1;Name=PDP76808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874574.1;locus_tag=CLI76_07710;product=DNA methylase;protein_id=PDP76808.1;transl_table=11 NSLT01000038.1 Genbank gene 2889 3764 . + . ID=gene-CLI76_07715;Name=CLI76_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07715 NSLT01000038.1 GeneMarkS+ CDS 2889 3764 . + 0 ID=cds-PDP76793.1;Parent=gene-CLI76_07715;Dbxref=NCBI_GP:PDP76793.1;Name=PDP76793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07715;product=hypothetical protein;protein_id=PDP76793.1;transl_table=11 NSLT01000038.1 Genbank gene 3843 6221 . + . ID=gene-CLI76_07720;Name=CLI76_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07720 NSLT01000038.1 GeneMarkS+ CDS 3843 6221 . + 0 ID=cds-PDP76794.1;Parent=gene-CLI76_07720;Dbxref=NCBI_GP:PDP76794.1;Name=PDP76794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07720;product=hypothetical protein;protein_id=PDP76794.1;transl_table=11 NSLT01000038.1 Genbank gene 6521 7924 . - . ID=gene-CLI76_07725;Name=CLI76_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07725 NSLT01000038.1 Protein Homology CDS 6521 7924 . - 0 ID=cds-PDP76795.1;Parent=gene-CLI76_07725;Dbxref=NCBI_GP:PDP76795.1;Name=PDP76795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956030.1;locus_tag=CLI76_07725;product=MFS transporter;protein_id=PDP76795.1;transl_table=11 NSLT01000038.1 Genbank gene 7961 9250 . - . ID=gene-CLI76_07730;Name=CLI76_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07730 NSLT01000038.1 Protein Homology CDS 7961 9250 . - 0 ID=cds-PDP76796.1;Parent=gene-CLI76_07730;Dbxref=NCBI_GP:PDP76796.1;Name=PDP76796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816241.1;locus_tag=CLI76_07730;product=dihydrofolate synthase;protein_id=PDP76796.1;transl_table=11 NSLT01000038.1 Genbank gene 9247 10518 . - . ID=gene-CLI76_07735;Name=CLI76_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07735 NSLT01000038.1 Protein Homology CDS 9247 10518 . - 0 ID=cds-PDP76797.1;Parent=gene-CLI76_07735;Dbxref=NCBI_GP:PDP76797.1;Name=PDP76797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873852.1;locus_tag=CLI76_07735;product=adenylosuccinate synthase;protein_id=PDP76797.1;transl_table=11 NSLT01000038.1 Genbank gene 10547 11047 . - . ID=gene-CLI76_07740;Name=CLI76_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07740 NSLT01000038.1 Protein Homology CDS 10547 11047 . - 0 ID=cds-PDP76809.1;Parent=gene-CLI76_07740;Dbxref=NCBI_GP:PDP76809.1;Name=PDP76809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458324.1;locus_tag=CLI76_07740;product=Fur family transcriptional regulator;protein_id=PDP76809.1;transl_table=11 NSLT01000038.1 Genbank gene 11133 12005 . - . ID=gene-CLI76_07745;Name=CLI76_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07745 NSLT01000038.1 Protein Homology CDS 11133 12005 . - 0 ID=cds-PDP76798.1;Parent=gene-CLI76_07745;Dbxref=NCBI_GP:PDP76798.1;Name=PDP76798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584995.1;locus_tag=CLI76_07745;product=DUF3298 domain-containing protein;protein_id=PDP76798.1;transl_table=11 NSLT01000038.1 Genbank gene 12018 13028 . - . ID=gene-CLI76_07750;Name=CLI76_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07750 NSLT01000038.1 Protein Homology CDS 12018 13028 . - 0 ID=cds-PDP76799.1;Parent=gene-CLI76_07750;Dbxref=NCBI_GP:PDP76799.1;Name=PDP76799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458323.1;locus_tag=CLI76_07750;product=mannose-6-phosphate isomerase;protein_id=PDP76799.1;transl_table=11 NSLT01000038.1 Genbank gene 13051 13302 . - . ID=gene-CLI76_07755;Name=CLI76_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07755 NSLT01000038.1 Protein Homology CDS 13051 13302 . - 0 ID=cds-PDP76800.1;Parent=gene-CLI76_07755;Dbxref=NCBI_GP:PDP76800.1;Name=PDP76800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873859.1;locus_tag=CLI76_07755;product=hypothetical protein;protein_id=PDP76800.1;transl_table=11 NSLT01000038.1 Genbank gene 14052 15110 . + . ID=gene-CLI76_07760;Name=CLI76_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07760 NSLT01000038.1 Protein Homology CDS 14052 15110 . + 0 ID=cds-PDP76801.1;Parent=gene-CLI76_07760;Dbxref=NCBI_GP:PDP76801.1;Name=PDP76801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458320.1;locus_tag=CLI76_07760;product=hypothetical protein;protein_id=PDP76801.1;transl_table=11 NSLT01000038.1 Genbank gene 15097 16092 . + . ID=gene-CLI76_07765;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CLI76_07765 NSLT01000038.1 Protein Homology CDS 15097 16092 . + 0 ID=cds-PDP76802.1;Parent=gene-CLI76_07765;Dbxref=NCBI_GP:PDP76802.1;Name=PDP76802.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964417.1;locus_tag=CLI76_07765;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=PDP76802.1;transl_table=11 NSLT01000038.1 Genbank pseudogene 16222 16623 . + . ID=gene-CLI76_07770;Name=CLI76_07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07770;pseudo=true NSLT01000038.1 Protein Homology CDS 16222 16623 . + 0 ID=cds-CLI76_07770;Parent=gene-CLI76_07770;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816246.1;locus_tag=CLI76_07770;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000038.1 Genbank gene 16719 17753 . - . ID=gene-CLI76_07775;Name=CLI76_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07775 NSLT01000038.1 Protein Homology CDS 16719 17753 . - 0 ID=cds-PDP76803.1;Parent=gene-CLI76_07775;Dbxref=NCBI_GP:PDP76803.1;Name=PDP76803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873862.1;locus_tag=CLI76_07775;product=threonine aldolase;protein_id=PDP76803.1;transl_table=11 NSLT01000038.1 Genbank gene 17793 18923 . - . ID=gene-CLI76_07780;Name=CLI76_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07780 NSLT01000038.1 Protein Homology CDS 17793 18923 . - 0 ID=cds-PDP76804.1;Parent=gene-CLI76_07780;Dbxref=NCBI_GP:PDP76804.1;Name=PDP76804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816248.1;locus_tag=CLI76_07780;product=coproporphyrinogen III oxidase;protein_id=PDP76804.1;transl_table=11 NSLT01000038.1 Genbank gene 18920 20467 . - . ID=gene-CLI76_07785;Name=CLI76_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07785 NSLT01000038.1 Protein Homology CDS 18920 20467 . - 0 ID=cds-PDP76805.1;Parent=gene-CLI76_07785;Dbxref=NCBI_GP:PDP76805.1;Name=PDP76805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585006.1;locus_tag=CLI76_07785;product=hypothetical protein;protein_id=PDP76805.1;transl_table=11 NSLT01000038.1 Genbank gene 20457 21302 . - . ID=gene-CLI76_07790;Name=CLI76_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07790 NSLT01000038.1 Protein Homology CDS 20457 21302 . - 0 ID=cds-PDP76806.1;Parent=gene-CLI76_07790;Dbxref=NCBI_GP:PDP76806.1;Name=PDP76806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873851.1;locus_tag=CLI76_07790;product=pantoate--beta-alanine ligase;protein_id=PDP76806.1;transl_table=11 NSLT01000038.1 Genbank gene 21463 22221 . + . ID=gene-CLI76_07795;Name=CLI76_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07795 NSLT01000038.1 Protein Homology CDS 21463 22221 . + 0 ID=cds-PDP76807.1;Parent=gene-CLI76_07795;Dbxref=NCBI_GP:PDP76807.1;Name=PDP76807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458313.1;locus_tag=CLI76_07795;product=hypothetical protein;protein_id=PDP76807.1;transl_table=11 ##sequence-region NSLT01000039.1 1 22272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000039.1 Genbank region 1 22272 . + . ID=NSLT01000039.1:1..22272;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000039.1 Genbank gene 1 941 . - . ID=gene-CLI76_07800;Name=CLI76_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07800;partial=true;start_range=.,1 NSLT01000039.1 Protein Homology CDS 1 941 . - 0 ID=cds-PDP76779.1;Parent=gene-CLI76_07800;Dbxref=NCBI_GP:PDP76779.1;Name=PDP76779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956327.1;locus_tag=CLI76_07800;partial=true;product=LytB;protein_id=PDP76779.1;start_range=.,1;transl_table=11 NSLT01000039.1 Genbank gene 957 1607 . - . ID=gene-CLI76_07805;Name=CLI76_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07805 NSLT01000039.1 Protein Homology CDS 957 1607 . - 0 ID=cds-PDP76780.1;Parent=gene-CLI76_07805;Dbxref=NCBI_GP:PDP76780.1;Name=PDP76780.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03756.11;locus_tag=CLI76_07805;product=hypothetical protein;protein_id=PDP76780.1;transl_table=11 NSLT01000039.1 Genbank gene 2116 2715 . + . ID=gene-CLI76_07810;Name=CLI76_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07810 NSLT01000039.1 Protein Homology CDS 2116 2715 . + 0 ID=cds-PDP76781.1;Parent=gene-CLI76_07810;Dbxref=NCBI_GP:PDP76781.1;Name=PDP76781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874657.1;locus_tag=CLI76_07810;product=TetR/AcrR family transcriptional regulator;protein_id=PDP76781.1;transl_table=11 NSLT01000039.1 Genbank gene 2776 9963 . - . ID=gene-CLI76_07815;Name=CLI76_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07815 NSLT01000039.1 Protein Homology CDS 2776 9963 . - 0 ID=cds-PDP76782.1;Parent=gene-CLI76_07815;Dbxref=NCBI_GP:PDP76782.1;Name=PDP76782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585379.1;locus_tag=CLI76_07815;product=helicase;protein_id=PDP76782.1;transl_table=11 NSLT01000039.1 Genbank gene 9969 12062 . - . ID=gene-CLI76_07820;Name=CLI76_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07820 NSLT01000039.1 Protein Homology CDS 9969 12062 . - 0 ID=cds-PDP76783.1;Parent=gene-CLI76_07820;Dbxref=NCBI_GP:PDP76783.1;Name=PDP76783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816520.1;locus_tag=CLI76_07820;product=DNA topoisomerase III;protein_id=PDP76783.1;transl_table=11 NSLT01000039.1 Genbank gene 12151 13560 . - . ID=gene-CLI76_07825;Name=CLI76_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07825 NSLT01000039.1 Protein Homology CDS 12151 13560 . - 0 ID=cds-PDP76784.1;Parent=gene-CLI76_07825;Dbxref=NCBI_GP:PDP76784.1;Name=PDP76784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874649.1;locus_tag=CLI76_07825;product=hypothetical protein;protein_id=PDP76784.1;transl_table=11 NSLT01000039.1 Genbank gene 14414 15424 . + . ID=gene-CLI76_07830;Name=gwsG;gbkey=Gene;gene=gwsG;gene_biotype=protein_coding;locus_tag=CLI76_07830 NSLT01000039.1 Protein Homology CDS 14414 15424 . + 0 ID=cds-PDP76785.1;Parent=gene-CLI76_07830;Dbxref=NCBI_GP:PDP76785.1;Name=PDP76785.1;gbkey=CDS;gene=gwsG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585382.1;locus_tag=CLI76_07830;product=grasp-with-spasm system ATP-grasp peptide maturase;protein_id=PDP76785.1;transl_table=11 NSLT01000039.1 Genbank gene 15409 16737 . + . ID=gene-CLI76_07835;Name=gwsS;gbkey=Gene;gene=gwsS;gene_biotype=protein_coding;locus_tag=CLI76_07835 NSLT01000039.1 Protein Homology CDS 15409 16737 . + 0 ID=cds-PDP76786.1;Parent=gene-CLI76_07835;Dbxref=NCBI_GP:PDP76786.1;Name=PDP76786.1;gbkey=CDS;gene=gwsS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585383.1;locus_tag=CLI76_07835;product=grasp-with-spasm system SPASM domain peptide maturase;protein_id=PDP76786.1;transl_table=11 NSLT01000039.1 Genbank gene 16750 19095 . + . ID=gene-CLI76_07840;Name=CLI76_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07840 NSLT01000039.1 Protein Homology CDS 16750 19095 . + 0 ID=cds-PDP76787.1;Parent=gene-CLI76_07840;Dbxref=NCBI_GP:PDP76787.1;Name=PDP76787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585384.1;locus_tag=CLI76_07840;product=TonB-dependent receptor;protein_id=PDP76787.1;transl_table=11 NSLT01000039.1 Genbank gene 19126 21339 . + . ID=gene-CLI76_07845;Name=CLI76_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07845 NSLT01000039.1 Protein Homology CDS 19126 21339 . + 0 ID=cds-PDP76788.1;Parent=gene-CLI76_07845;Dbxref=NCBI_GP:PDP76788.1;Name=PDP76788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816524.1;locus_tag=CLI76_07845;product=ABC transporter ATP-binding protein;protein_id=PDP76788.1;transl_table=11 NSLT01000039.1 Genbank gene 21341 21829 . + . ID=gene-CLI76_07850;Name=CLI76_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07850 NSLT01000039.1 Protein Homology CDS 21341 21829 . + 0 ID=cds-PDP76789.1;Parent=gene-CLI76_07850;Dbxref=NCBI_GP:PDP76789.1;Name=PDP76789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004364872.1;locus_tag=CLI76_07850;product=hypothetical protein;protein_id=PDP76789.1;transl_table=11 NSLT01000039.1 Genbank gene 21837 22272 . - . ID=gene-CLI76_07855;Name=CLI76_07855;end_range=22272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07855;partial=true NSLT01000039.1 Protein Homology CDS 21837 22272 . - 1 ID=cds-PDP76790.1;Parent=gene-CLI76_07855;Dbxref=NCBI_GP:PDP76790.1;Name=PDP76790.1;end_range=22272,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009435259.1;locus_tag=CLI76_07855;partial=true;product=conjugal transfer protein TraG;protein_id=PDP76790.1;transl_table=11 ##sequence-region NSLT01000003.1 1 85361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000003.1 Genbank region 1 85361 . + . ID=NSLT01000003.1:1..85361;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000003.1 Genbank gene 1 997 . - . ID=gene-CLI76_00855;Name=CLI76_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00855;partial=true;start_range=.,1 NSLT01000003.1 Protein Homology CDS 1 997 . - 0 ID=cds-PDP78064.1;Parent=gene-CLI76_00855;Dbxref=NCBI_GP:PDP78064.1;Name=PDP78064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956476.1;locus_tag=CLI76_00855;partial=true;product=peptidase C25;protein_id=PDP78064.1;start_range=.,1;transl_table=11 NSLT01000003.1 Genbank gene 1779 2312 . + . ID=gene-CLI76_00860;Name=CLI76_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00860 NSLT01000003.1 Protein Homology CDS 1779 2312 . + 0 ID=cds-PDP77997.1;Parent=gene-CLI76_00860;Dbxref=NCBI_GP:PDP77997.1;Name=PDP77997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956477.1;locus_tag=CLI76_00860;product=phosphoglycerate kinase;protein_id=PDP77997.1;transl_table=11 NSLT01000003.1 Genbank gene 2404 2865 . + . ID=gene-CLI76_00865;Name=CLI76_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00865 NSLT01000003.1 Protein Homology CDS 2404 2865 . + 0 ID=cds-PDP78065.1;Parent=gene-CLI76_00865;Dbxref=NCBI_GP:PDP78065.1;Name=PDP78065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815308.1;locus_tag=CLI76_00865;product=hypothetical protein;protein_id=PDP78065.1;transl_table=11 NSLT01000003.1 Genbank gene 2874 3383 . + . ID=gene-CLI76_00870;Name=CLI76_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00870 NSLT01000003.1 Protein Homology CDS 2874 3383 . + 0 ID=cds-PDP78066.1;Parent=gene-CLI76_00870;Dbxref=NCBI_GP:PDP78066.1;Name=PDP78066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583671.1;locus_tag=CLI76_00870;product=Cys-tRNA(Pro) deacylase;protein_id=PDP78066.1;transl_table=11 NSLT01000003.1 Genbank gene 3417 5969 . + . ID=gene-CLI76_00875;Name=CLI76_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00875 NSLT01000003.1 Protein Homology CDS 3417 5969 . + 0 ID=cds-PDP77998.1;Parent=gene-CLI76_00875;Dbxref=NCBI_GP:PDP77998.1;Name=PDP77998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874426.1;locus_tag=CLI76_00875;product=hypothetical protein;protein_id=PDP77998.1;transl_table=11 NSLT01000003.1 Genbank gene 6539 7174 . + . ID=gene-CLI76_00880;Name=CLI76_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00880 NSLT01000003.1 Protein Homology CDS 6539 7174 . + 0 ID=cds-PDP77999.1;Parent=gene-CLI76_00880;Dbxref=NCBI_GP:PDP77999.1;Name=PDP77999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458659.1;locus_tag=CLI76_00880;product=hypothetical protein;protein_id=PDP77999.1;transl_table=11 NSLT01000003.1 Genbank gene 7242 7637 . + . ID=gene-CLI76_00885;Name=CLI76_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00885 NSLT01000003.1 Protein Homology CDS 7242 7637 . + 0 ID=cds-PDP78067.1;Parent=gene-CLI76_00885;Dbxref=NCBI_GP:PDP78067.1;Name=PDP78067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583674.1;locus_tag=CLI76_00885;product=hypothetical protein;protein_id=PDP78067.1;transl_table=11 NSLT01000003.1 Genbank gene 7664 10177 . - . ID=gene-CLI76_00890;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CLI76_00890 NSLT01000003.1 Protein Homology CDS 7664 10177 . - 0 ID=cds-PDP78000.1;Parent=gene-CLI76_00890;Dbxref=NCBI_GP:PDP78000.1;Name=PDP78000.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964490.1;locus_tag=CLI76_00890;product=primosomal protein N';protein_id=PDP78000.1;transl_table=11 NSLT01000003.1 Genbank gene 10211 11683 . - . ID=gene-CLI76_00895;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=CLI76_00895 NSLT01000003.1 Protein Homology CDS 10211 11683 . - 0 ID=cds-PDP78001.1;Parent=gene-CLI76_00895;Dbxref=NCBI_GP:PDP78001.1;Name=PDP78001.1;gbkey=CDS;gene=gltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583676.1;locus_tag=CLI76_00895;product=glutamate synthase (NADPH)%2C homotetrameric;protein_id=PDP78001.1;transl_table=11 NSLT01000003.1 Genbank gene 11706 12497 . - . ID=gene-CLI76_00900;Name=CLI76_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00900 NSLT01000003.1 Protein Homology CDS 11706 12497 . - 0 ID=cds-PDP78002.1;Parent=gene-CLI76_00900;Dbxref=NCBI_GP:PDP78002.1;Name=PDP78002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152648.1;locus_tag=CLI76_00900;product=ferredoxin-NADP reductase;protein_id=PDP78002.1;transl_table=11 NSLT01000003.1 Genbank gene 12698 13375 . + . ID=gene-CLI76_00905;Name=CLI76_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00905 NSLT01000003.1 Protein Homology CDS 12698 13375 . + 0 ID=cds-PDP78003.1;Parent=gene-CLI76_00905;Dbxref=NCBI_GP:PDP78003.1;Name=PDP78003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_809806.1;locus_tag=CLI76_00905;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=PDP78003.1;transl_table=11 NSLT01000003.1 Genbank gene 13407 14318 . + . ID=gene-CLI76_00910;Name=CLI76_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00910 NSLT01000003.1 Protein Homology CDS 13407 14318 . + 0 ID=cds-PDP78004.1;Parent=gene-CLI76_00910;Dbxref=NCBI_GP:PDP78004.1;Name=PDP78004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874430.1;locus_tag=CLI76_00910;product=ion transporter;protein_id=PDP78004.1;transl_table=11 NSLT01000003.1 Genbank gene 14387 14608 . - . ID=gene-CLI76_00915;Name=CLI76_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00915 NSLT01000003.1 Protein Homology CDS 14387 14608 . - 0 ID=cds-PDP78005.1;Parent=gene-CLI76_00915;Dbxref=NCBI_GP:PDP78005.1;Name=PDP78005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874429.1;locus_tag=CLI76_00915;product=hypothetical protein;protein_id=PDP78005.1;transl_table=11 NSLT01000003.1 Genbank gene 14605 15054 . - . ID=gene-CLI76_00920;Name=CLI76_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00920 NSLT01000003.1 Protein Homology CDS 14605 15054 . - 0 ID=cds-PDP78006.1;Parent=gene-CLI76_00920;Dbxref=NCBI_GP:PDP78006.1;Name=PDP78006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458663.1;locus_tag=CLI76_00920;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP78006.1;transl_table=11 NSLT01000003.1 Genbank gene 15194 15670 . - . ID=gene-CLI76_00925;Name=CLI76_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00925 NSLT01000003.1 Protein Homology CDS 15194 15670 . - 0 ID=cds-PDP78007.1;Parent=gene-CLI76_00925;Dbxref=NCBI_GP:PDP78007.1;Name=PDP78007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583683.1;locus_tag=CLI76_00925;product=histidinol phosphate phosphatase;protein_id=PDP78007.1;transl_table=11 NSLT01000003.1 Genbank pseudogene 16031 16762 . - . ID=gene-CLI76_00930;Name=CLI76_00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_00930;pseudo=true NSLT01000003.1 Protein Homology CDS 16031 16762 . - 0 ID=cds-CLI76_00930;Parent=gene-CLI76_00930;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583685.1;locus_tag=CLI76_00930;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000003.1 Genbank gene 16893 18410 . - . ID=gene-CLI76_00935;Name=CLI76_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00935 NSLT01000003.1 Protein Homology CDS 16893 18410 . - 0 ID=cds-PDP78008.1;Parent=gene-CLI76_00935;Dbxref=NCBI_GP:PDP78008.1;Name=PDP78008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583686.1;locus_tag=CLI76_00935;product=thioredoxin family protein;protein_id=PDP78008.1;transl_table=11 NSLT01000003.1 Genbank gene 18791 18931 . + . ID=gene-CLI76_00940;Name=CLI76_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00940 NSLT01000003.1 Protein Homology CDS 18791 18931 . + 0 ID=cds-PDP78009.1;Parent=gene-CLI76_00940;Dbxref=NCBI_GP:PDP78009.1;Name=PDP78009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_00940;product=DUF1661 domain-containing protein;protein_id=PDP78009.1;transl_table=11 NSLT01000003.1 Genbank gene 19061 20155 . + . ID=gene-CLI76_00945;Name=CLI76_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00945 NSLT01000003.1 Protein Homology CDS 19061 20155 . + 0 ID=cds-PDP78068.1;Parent=gene-CLI76_00945;Dbxref=NCBI_GP:PDP78068.1;Name=PDP78068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815321.1;locus_tag=CLI76_00945;product=Nif3-like dinuclear metal center hexameric protein;protein_id=PDP78068.1;transl_table=11 NSLT01000003.1 Genbank gene 20173 20928 . + . ID=gene-CLI76_00950;Name=CLI76_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00950 NSLT01000003.1 Protein Homology CDS 20173 20928 . + 0 ID=cds-PDP78010.1;Parent=gene-CLI76_00950;Dbxref=NCBI_GP:PDP78010.1;Name=PDP78010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964486.1;locus_tag=CLI76_00950;product=hypothetical protein;protein_id=PDP78010.1;transl_table=11 NSLT01000003.1 Genbank gene 21192 22556 . + . ID=gene-CLI76_00955;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CLI76_00955 NSLT01000003.1 Protein Homology CDS 21192 22556 . + 0 ID=cds-PDP78011.1;Parent=gene-CLI76_00955;Dbxref=NCBI_GP:PDP78011.1;Name=PDP78011.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874428.1;locus_tag=CLI76_00955;product=tRNA lysidine(34) synthetase TilS;protein_id=PDP78011.1;transl_table=11 NSLT01000003.1 Genbank gene 22551 24836 . - . ID=gene-CLI76_00960;Name=CLI76_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00960 NSLT01000003.1 Protein Homology CDS 22551 24836 . - 0 ID=cds-PDP78012.1;Parent=gene-CLI76_00960;Dbxref=NCBI_GP:PDP78012.1;Name=PDP78012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874431.1;locus_tag=CLI76_00960;product=helicase;protein_id=PDP78012.1;transl_table=11 NSLT01000003.1 Genbank gene 24927 25307 . - . ID=gene-CLI76_00965;Name=CLI76_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00965 NSLT01000003.1 Protein Homology CDS 24927 25307 . - 0 ID=cds-PDP78013.1;Parent=gene-CLI76_00965;Dbxref=NCBI_GP:PDP78013.1;Name=PDP78013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874417.1;locus_tag=CLI76_00965;product=hypothetical protein;protein_id=PDP78013.1;transl_table=11 NSLT01000003.1 Genbank gene 25320 25697 . - . ID=gene-CLI76_00970;Name=CLI76_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00970 NSLT01000003.1 Protein Homology CDS 25320 25697 . - 0 ID=cds-PDP78014.1;Parent=gene-CLI76_00970;Dbxref=NCBI_GP:PDP78014.1;Name=PDP78014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874424.1;locus_tag=CLI76_00970;product=hypothetical protein;protein_id=PDP78014.1;transl_table=11 NSLT01000003.1 Genbank gene 25953 26228 . - . ID=gene-CLI76_00975;Name=CLI76_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00975 NSLT01000003.1 Protein Homology CDS 25953 26228 . - 0 ID=cds-PDP78015.1;Parent=gene-CLI76_00975;Dbxref=NCBI_GP:PDP78015.1;Name=PDP78015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964481.1;locus_tag=CLI76_00975;product=hypothetical protein;protein_id=PDP78015.1;transl_table=11 NSLT01000003.1 Genbank gene 26456 27349 . + . ID=gene-CLI76_00980;Name=CLI76_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00980 NSLT01000003.1 Protein Homology CDS 26456 27349 . + 0 ID=cds-PDP78016.1;Parent=gene-CLI76_00980;Dbxref=NCBI_GP:PDP78016.1;Name=PDP78016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815324.1;locus_tag=CLI76_00980;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=PDP78016.1;transl_table=11 NSLT01000003.1 Genbank gene 27378 28031 . + . ID=gene-CLI76_00985;Name=CLI76_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00985 NSLT01000003.1 Protein Homology CDS 27378 28031 . + 0 ID=cds-PDP78017.1;Parent=gene-CLI76_00985;Dbxref=NCBI_GP:PDP78017.1;Name=PDP78017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874413.1;locus_tag=CLI76_00985;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=PDP78017.1;transl_table=11 NSLT01000003.1 Genbank gene 28137 28808 . - . ID=gene-CLI76_00990;Name=CLI76_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00990 NSLT01000003.1 Protein Homology CDS 28137 28808 . - 0 ID=cds-PDP78018.1;Parent=gene-CLI76_00990;Dbxref=NCBI_GP:PDP78018.1;Name=PDP78018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964478.1;locus_tag=CLI76_00990;product=OmpA family protein;protein_id=PDP78018.1;transl_table=11 NSLT01000003.1 Genbank gene 28874 29854 . - . ID=gene-CLI76_00995;Name=CLI76_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_00995 NSLT01000003.1 Protein Homology CDS 28874 29854 . - 0 ID=cds-PDP78019.1;Parent=gene-CLI76_00995;Dbxref=NCBI_GP:PDP78019.1;Name=PDP78019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964477.1;locus_tag=CLI76_00995;product=diguanylate cyclase;protein_id=PDP78019.1;transl_table=11 NSLT01000003.1 Genbank gene 30377 30452 . - . ID=gene-CLI76_01000;Name=CLI76_01000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_01000 NSLT01000003.1 tRNAscan-SE tRNA 30377 30452 . - . ID=rna-CLI76_01000;Parent=gene-CLI76_01000;anticodon=(pos:complement(30417..30419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01000;product=tRNA-Lys NSLT01000003.1 tRNAscan-SE exon 30377 30452 . - . ID=exon-CLI76_01000-1;Parent=rna-CLI76_01000;anticodon=(pos:complement(30417..30419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01000;product=tRNA-Lys NSLT01000003.1 Genbank gene 30580 30864 . - . ID=gene-CLI76_01005;Name=CLI76_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01005 NSLT01000003.1 Protein Homology CDS 30580 30864 . - 0 ID=cds-PDP78020.1;Parent=gene-CLI76_01005;Dbxref=NCBI_GP:PDP78020.1;Name=PDP78020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816102.1;locus_tag=CLI76_01005;product=hypothetical protein;protein_id=PDP78020.1;transl_table=11 NSLT01000003.1 Genbank gene 31247 32434 . + . ID=gene-CLI76_01010;Name=CLI76_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01010 NSLT01000003.1 Protein Homology CDS 31247 32434 . + 0 ID=cds-PDP78021.1;Parent=gene-CLI76_01010;Dbxref=NCBI_GP:PDP78021.1;Name=PDP78021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873974.1;locus_tag=CLI76_01010;product=sensor histidine kinase;protein_id=PDP78021.1;transl_table=11 NSLT01000003.1 Genbank gene 32894 34648 . + . ID=gene-CLI76_01015;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CLI76_01015 NSLT01000003.1 Protein Homology CDS 32894 34648 . + 0 ID=cds-PDP78022.1;Parent=gene-CLI76_01015;Dbxref=NCBI_GP:PDP78022.1;Name=PDP78022.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458677.1;locus_tag=CLI76_01015;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=PDP78022.1;transl_table=11 NSLT01000003.1 Genbank gene 34645 35700 . + . ID=gene-CLI76_01020;Name=CLI76_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01020 NSLT01000003.1 Protein Homology CDS 34645 35700 . + 0 ID=cds-PDP78023.1;Parent=gene-CLI76_01020;Dbxref=NCBI_GP:PDP78023.1;Name=PDP78023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955907.1;locus_tag=CLI76_01020;product=PspC domain-containing protein;protein_id=PDP78023.1;transl_table=11 NSLT01000003.1 Genbank gene 35831 37531 . + . ID=gene-CLI76_01025;Name=CLI76_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01025 NSLT01000003.1 Protein Homology CDS 35831 37531 . + 0 ID=cds-PDP78024.1;Parent=gene-CLI76_01025;Dbxref=NCBI_GP:PDP78024.1;Name=PDP78024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873955.1;locus_tag=CLI76_01025;product=hypothetical protein;protein_id=PDP78024.1;transl_table=11 NSLT01000003.1 Genbank gene 37564 38748 . + . ID=gene-CLI76_01030;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CLI76_01030 NSLT01000003.1 Protein Homology CDS 37564 38748 . + 0 ID=cds-PDP78025.1;Parent=gene-CLI76_01030;Dbxref=NCBI_GP:PDP78025.1;Name=PDP78025.1;gbkey=CDS;gene=pncB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583719.1;locus_tag=CLI76_01030;product=nicotinate phosphoribosyltransferase;protein_id=PDP78025.1;transl_table=11 NSLT01000003.1 Genbank gene 38748 39341 . + . ID=gene-CLI76_01035;Name=CLI76_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01035 NSLT01000003.1 Protein Homology CDS 38748 39341 . + 0 ID=cds-PDP78026.1;Parent=gene-CLI76_01035;Dbxref=NCBI_GP:PDP78026.1;Name=PDP78026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815332.1;locus_tag=CLI76_01035;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=PDP78026.1;transl_table=11 NSLT01000003.1 Genbank gene 39355 39738 . + . ID=gene-CLI76_01040;Name=CLI76_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01040 NSLT01000003.1 Protein Homology CDS 39355 39738 . + 0 ID=cds-PDP78027.1;Parent=gene-CLI76_01040;Dbxref=NCBI_GP:PDP78027.1;Name=PDP78027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583721.1;locus_tag=CLI76_01040;product=hypothetical protein;protein_id=PDP78027.1;transl_table=11 NSLT01000003.1 Genbank gene 39745 39927 . + . ID=gene-CLI76_01045;Name=CLI76_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01045 NSLT01000003.1 Protein Homology CDS 39745 39927 . + 0 ID=cds-PDP78028.1;Parent=gene-CLI76_01045;Dbxref=NCBI_GP:PDP78028.1;Name=PDP78028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964468.1;locus_tag=CLI76_01045;product=hypothetical protein;protein_id=PDP78028.1;transl_table=11 NSLT01000003.1 Genbank gene 40031 41512 . + . ID=gene-CLI76_01050;Name=CLI76_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01050 NSLT01000003.1 Protein Homology CDS 40031 41512 . + 0 ID=cds-PDP78029.1;Parent=gene-CLI76_01050;Dbxref=NCBI_GP:PDP78029.1;Name=PDP78029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583723.1;locus_tag=CLI76_01050;product=hypothetical protein;protein_id=PDP78029.1;transl_table=11 NSLT01000003.1 Genbank gene 41517 43559 . + . ID=gene-CLI76_01055;Name=CLI76_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01055 NSLT01000003.1 Protein Homology CDS 41517 43559 . + 0 ID=cds-PDP78030.1;Parent=gene-CLI76_01055;Dbxref=NCBI_GP:PDP78030.1;Name=PDP78030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815334.1;locus_tag=CLI76_01055;product=helicase;protein_id=PDP78030.1;transl_table=11 NSLT01000003.1 Genbank gene 43657 44835 . - . ID=gene-CLI76_01060;Name=CLI76_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01060 NSLT01000003.1 Protein Homology CDS 43657 44835 . - 0 ID=cds-PDP78031.1;Parent=gene-CLI76_01060;Dbxref=NCBI_GP:PDP78031.1;Name=PDP78031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815335.1;locus_tag=CLI76_01060;product=transporter;protein_id=PDP78031.1;transl_table=11 NSLT01000003.1 Genbank gene 44853 47972 . - . ID=gene-CLI76_01065;Name=CLI76_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01065 NSLT01000003.1 Protein Homology CDS 44853 47972 . - 0 ID=cds-PDP78032.1;Parent=gene-CLI76_01065;Dbxref=NCBI_GP:PDP78032.1;Name=PDP78032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583726.1;locus_tag=CLI76_01065;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=PDP78032.1;transl_table=11 NSLT01000003.1 Genbank gene 47992 49170 . - . ID=gene-CLI76_01070;Name=CLI76_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01070 NSLT01000003.1 Protein Homology CDS 47992 49170 . - 0 ID=cds-PDP78033.1;Parent=gene-CLI76_01070;Dbxref=NCBI_GP:PDP78033.1;Name=PDP78033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458686.1;locus_tag=CLI76_01070;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP78033.1;transl_table=11 NSLT01000003.1 Genbank gene 49692 50111 . - . ID=gene-CLI76_01075;Name=CLI76_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01075 NSLT01000003.1 Protein Homology CDS 49692 50111 . - 0 ID=cds-PDP78034.1;Parent=gene-CLI76_01075;Dbxref=NCBI_GP:PDP78034.1;Name=PDP78034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583728.1;locus_tag=CLI76_01075;product=hypothetical protein;protein_id=PDP78034.1;transl_table=11 NSLT01000003.1 Genbank gene 50183 51697 . - . ID=gene-CLI76_01080;Name=CLI76_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01080 NSLT01000003.1 Protein Homology CDS 50183 51697 . - 0 ID=cds-PDP78035.1;Parent=gene-CLI76_01080;Dbxref=NCBI_GP:PDP78035.1;Name=PDP78035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873960.1;locus_tag=CLI76_01080;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=PDP78035.1;transl_table=11 NSLT01000003.1 Genbank gene 51702 52493 . - . ID=gene-CLI76_01085;Name=CLI76_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01085 NSLT01000003.1 Protein Homology CDS 51702 52493 . - 0 ID=cds-PDP78036.1;Parent=gene-CLI76_01085;Dbxref=NCBI_GP:PDP78036.1;Name=PDP78036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432919.1;locus_tag=CLI76_01085;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=PDP78036.1;transl_table=11 NSLT01000003.1 Genbank gene 52493 53881 . - . ID=gene-CLI76_01090;Name=CLI76_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01090 NSLT01000003.1 Protein Homology CDS 52493 53881 . - 0 ID=cds-PDP78037.1;Parent=gene-CLI76_01090;Dbxref=NCBI_GP:PDP78037.1;Name=PDP78037.1;Note=catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964782.1;locus_tag=CLI76_01090;product=bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase;protein_id=PDP78037.1;transl_table=11 NSLT01000003.1 Genbank gene 53860 54909 . - . ID=gene-CLI76_01095;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CLI76_01095 NSLT01000003.1 Protein Homology CDS 53860 54909 . - 0 ID=cds-PDP78038.1;Parent=gene-CLI76_01095;Dbxref=NCBI_GP:PDP78038.1;Name=PDP78038.1;gbkey=CDS;gene=lpxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583732.1;locus_tag=CLI76_01095;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=PDP78038.1;transl_table=11 NSLT01000003.1 Genbank gene 55002 55832 . - . ID=gene-CLI76_01100;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CLI76_01100 NSLT01000003.1 Protein Homology CDS 55002 55832 . - 0 ID=cds-PDP78039.1;Parent=gene-CLI76_01100;Dbxref=NCBI_GP:PDP78039.1;Name=PDP78039.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018709623.1;locus_tag=CLI76_01100;product=orotidine 5'-phosphate decarboxylase;protein_id=PDP78039.1;transl_table=11 NSLT01000003.1 Genbank gene 55849 56934 . - . ID=gene-CLI76_01105;Name=CLI76_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01105 NSLT01000003.1 Protein Homology CDS 55849 56934 . - 0 ID=cds-PDP78040.1;Parent=gene-CLI76_01105;Dbxref=NCBI_GP:PDP78040.1;Name=PDP78040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006844127.1;locus_tag=CLI76_01105;product=peptide chain release factor 1;protein_id=PDP78040.1;transl_table=11 NSLT01000003.1 Genbank gene 56959 58125 . - . ID=gene-CLI76_01110;Name=CLI76_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01110 NSLT01000003.1 Protein Homology CDS 56959 58125 . - 0 ID=cds-PDP78041.1;Parent=gene-CLI76_01110;Dbxref=NCBI_GP:PDP78041.1;Name=PDP78041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_098196.1;locus_tag=CLI76_01110;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=PDP78041.1;transl_table=11 NSLT01000003.1 Genbank gene 58154 59095 . - . ID=gene-CLI76_01115;Name=CLI76_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01115 NSLT01000003.1 Protein Homology CDS 58154 59095 . - 0 ID=cds-PDP78042.1;Parent=gene-CLI76_01115;Dbxref=NCBI_GP:PDP78042.1;Name=PDP78042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583736.1;locus_tag=CLI76_01115;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PDP78042.1;transl_table=11 NSLT01000003.1 Genbank gene 59109 59303 . + . ID=gene-CLI76_01120;Name=CLI76_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01120 NSLT01000003.1 Protein Homology CDS 59109 59303 . + 0 ID=cds-PDP78043.1;Parent=gene-CLI76_01120;Dbxref=NCBI_GP:PDP78043.1;Name=PDP78043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966013.1;locus_tag=CLI76_01120;product=hypothetical protein;protein_id=PDP78043.1;transl_table=11 NSLT01000003.1 Genbank pseudogene 59285 59577 . - . ID=gene-CLI76_01125;Name=CLI76_01125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01125;pseudo=true NSLT01000003.1 Protein Homology CDS 59285 59577 . - 0 ID=cds-CLI76_01125;Parent=gene-CLI76_01125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458694.1;locus_tag=CLI76_01125;product=RloB-like protein;pseudo=true;transl_table=11 NSLT01000003.1 Genbank gene 59531 59770 . - . ID=gene-CLI76_01130;Name=CLI76_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01130 NSLT01000003.1 Protein Homology CDS 59531 59770 . - 0 ID=cds-PDP78044.1;Parent=gene-CLI76_01130;Dbxref=NCBI_GP:PDP78044.1;Name=PDP78044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815345.1;locus_tag=CLI76_01130;product=DUF1661 domain-containing protein;protein_id=PDP78044.1;transl_table=11 NSLT01000003.1 Genbank gene 59986 61971 . + . ID=gene-CLI76_01135;Name=CLI76_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01135 NSLT01000003.1 Protein Homology CDS 59986 61971 . + 0 ID=cds-PDP78045.1;Parent=gene-CLI76_01135;Dbxref=NCBI_GP:PDP78045.1;Name=PDP78045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458697.1;locus_tag=CLI76_01135;product=Ig-like protein;protein_id=PDP78045.1;transl_table=11 NSLT01000003.1 Genbank gene 62033 62935 . + . ID=gene-CLI76_01140;Name=CLI76_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01140 NSLT01000003.1 Protein Homology CDS 62033 62935 . + 0 ID=cds-PDP78046.1;Parent=gene-CLI76_01140;Dbxref=NCBI_GP:PDP78046.1;Name=PDP78046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458698.1;locus_tag=CLI76_01140;product=glycoside hydrolase xylanase;protein_id=PDP78046.1;transl_table=11 NSLT01000003.1 Genbank gene 62941 63726 . + . ID=gene-CLI76_01145;Name=CLI76_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01145 NSLT01000003.1 Protein Homology CDS 62941 63726 . + 0 ID=cds-PDP78047.1;Parent=gene-CLI76_01145;Dbxref=NCBI_GP:PDP78047.1;Name=PDP78047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458699.1;locus_tag=CLI76_01145;product=PorT family protein;protein_id=PDP78047.1;transl_table=11 NSLT01000003.1 Genbank gene 63821 65020 . + . ID=gene-CLI76_01150;Name=CLI76_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01150 NSLT01000003.1 Protein Homology CDS 63821 65020 . + 0 ID=cds-PDP78048.1;Parent=gene-CLI76_01150;Dbxref=NCBI_GP:PDP78048.1;Name=PDP78048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583743.1;locus_tag=CLI76_01150;product=L-serine ammonia-lyase;protein_id=PDP78048.1;transl_table=11 NSLT01000003.1 Genbank gene 65020 66465 . + . ID=gene-CLI76_01155;Name=CLI76_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01155 NSLT01000003.1 Protein Homology CDS 65020 66465 . + 0 ID=cds-PDP78049.1;Parent=gene-CLI76_01155;Dbxref=NCBI_GP:PDP78049.1;Name=PDP78049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458701.1;locus_tag=CLI76_01155;product=alpha-galactosidase;protein_id=PDP78049.1;transl_table=11 NSLT01000003.1 Genbank gene 66484 68298 . - . ID=gene-CLI76_01160;Name=CLI76_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01160 NSLT01000003.1 Protein Homology CDS 66484 68298 . - 0 ID=cds-PDP78050.1;Parent=gene-CLI76_01160;Dbxref=NCBI_GP:PDP78050.1;Name=PDP78050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583745.1;locus_tag=CLI76_01160;product=DEAD/DEAH box helicase;protein_id=PDP78050.1;transl_table=11 NSLT01000003.1 Genbank gene 68444 69064 . - . ID=gene-CLI76_01165;Name=CLI76_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01165 NSLT01000003.1 Protein Homology CDS 68444 69064 . - 0 ID=cds-PDP78051.1;Parent=gene-CLI76_01165;Dbxref=NCBI_GP:PDP78051.1;Name=PDP78051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955917.1;locus_tag=CLI76_01165;product=SIS domain-containing protein;protein_id=PDP78051.1;transl_table=11 NSLT01000003.1 Genbank gene 69264 70481 . + . ID=gene-CLI76_01170;Name=CLI76_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01170 NSLT01000003.1 Protein Homology CDS 69264 70481 . + 0 ID=cds-PDP78052.1;Parent=gene-CLI76_01170;Dbxref=NCBI_GP:PDP78052.1;Name=PDP78052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815352.1;locus_tag=CLI76_01170;product=insulinase family protein;protein_id=PDP78052.1;transl_table=11 NSLT01000003.1 Genbank gene 70633 70917 . + . ID=gene-CLI76_01175;Name=CLI76_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01175 NSLT01000003.1 Protein Homology CDS 70633 70917 . + 0 ID=cds-PDP78053.1;Parent=gene-CLI76_01175;Dbxref=NCBI_GP:PDP78053.1;Name=PDP78053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815353.1;locus_tag=CLI76_01175;product=hypothetical protein;protein_id=PDP78053.1;transl_table=11 NSLT01000003.1 Genbank gene 71375 71854 . + . ID=gene-CLI76_01180;Name=CLI76_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01180 NSLT01000003.1 Protein Homology CDS 71375 71854 . + 0 ID=cds-PDP78054.1;Parent=gene-CLI76_01180;Dbxref=NCBI_GP:PDP78054.1;Name=PDP78054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583748.1;locus_tag=CLI76_01180;product=DNA starvation/stationary phase protection protein;protein_id=PDP78054.1;transl_table=11 NSLT01000003.1 Genbank gene 71984 73258 . - . ID=gene-CLI76_01185;Name=CLI76_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01185 NSLT01000003.1 Protein Homology CDS 71984 73258 . - 0 ID=cds-PDP78055.1;Parent=gene-CLI76_01185;Dbxref=NCBI_GP:PDP78055.1;Name=PDP78055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964455.1;locus_tag=CLI76_01185;product=ABC transporter permease;protein_id=PDP78055.1;transl_table=11 NSLT01000003.1 Genbank gene 73260 74441 . - . ID=gene-CLI76_01190;Name=CLI76_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01190 NSLT01000003.1 Protein Homology CDS 73260 74441 . - 0 ID=cds-PDP78056.1;Parent=gene-CLI76_01190;Dbxref=NCBI_GP:PDP78056.1;Name=PDP78056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815357.1;locus_tag=CLI76_01190;product=ABC transporter permease;protein_id=PDP78056.1;transl_table=11 NSLT01000003.1 Genbank gene 74444 75439 . - . ID=gene-CLI76_01195;Name=CLI76_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01195 NSLT01000003.1 Protein Homology CDS 74444 75439 . - 0 ID=cds-PDP78057.1;Parent=gene-CLI76_01195;Dbxref=NCBI_GP:PDP78057.1;Name=PDP78057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873973.1;locus_tag=CLI76_01195;product=hemolysin secretion protein D;protein_id=PDP78057.1;transl_table=11 NSLT01000003.1 Genbank gene 75488 76993 . - . ID=gene-CLI76_01200;Name=CLI76_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01200 NSLT01000003.1 Protein Homology CDS 75488 76993 . - 0 ID=cds-PDP78058.1;Parent=gene-CLI76_01200;Dbxref=NCBI_GP:PDP78058.1;Name=PDP78058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583752.1;locus_tag=CLI76_01200;product=alkaline protease;protein_id=PDP78058.1;transl_table=11 NSLT01000003.1 Genbank gene 77322 77507 . + . ID=gene-CLI76_01205;Name=CLI76_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01205 NSLT01000003.1 GeneMarkS+ CDS 77322 77507 . + 0 ID=cds-PDP78059.1;Parent=gene-CLI76_01205;Dbxref=NCBI_GP:PDP78059.1;Name=PDP78059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01205;product=hypothetical protein;protein_id=PDP78059.1;transl_table=11 NSLT01000003.1 Genbank gene 77911 80586 . - . ID=gene-CLI76_01210;Name=CLI76_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01210 NSLT01000003.1 Protein Homology CDS 77911 80586 . - 0 ID=cds-PDP78060.1;Parent=gene-CLI76_01210;Dbxref=NCBI_GP:PDP78060.1;Name=PDP78060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873956.1;locus_tag=CLI76_01210;product=DNA mismatch repair protein MutS;protein_id=PDP78060.1;transl_table=11 NSLT01000003.1 Genbank gene 80879 81607 . - . ID=gene-CLI76_01215;Name=CLI76_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01215 NSLT01000003.1 Protein Homology CDS 80879 81607 . - 0 ID=cds-PDP78061.1;Parent=gene-CLI76_01215;Dbxref=NCBI_GP:PDP78061.1;Name=PDP78061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005856672.1;locus_tag=CLI76_01215;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=PDP78061.1;transl_table=11 NSLT01000003.1 Genbank gene 81650 84109 . - . ID=gene-CLI76_01220;Name=CLI76_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01220 NSLT01000003.1 Protein Homology CDS 81650 84109 . - 0 ID=cds-PDP78062.1;Parent=gene-CLI76_01220;Dbxref=NCBI_GP:PDP78062.1;Name=PDP78062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873967.1;locus_tag=CLI76_01220;product=phenylalanine--tRNA ligase subunit beta;protein_id=PDP78062.1;transl_table=11 NSLT01000003.1 Genbank gene 84572 85361 . - . ID=gene-CLI76_01225;Name=CLI76_01225;end_range=85361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01225;partial=true NSLT01000003.1 Protein Homology CDS 84572 85361 . - 1 ID=cds-PDP78063.1;Parent=gene-CLI76_01225;Dbxref=NCBI_GP:PDP78063.1;Name=PDP78063.1;end_range=85361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_01225;partial=true;product=IS3 family transposase;protein_id=PDP78063.1;transl_table=11 ##sequence-region NSLT01000040.1 1 21828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000040.1 Genbank region 1 21828 . + . ID=NSLT01000040.1:1..21828;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000040.1 Genbank gene 146 1099 . - . ID=gene-CLI76_07860;Name=CLI76_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07860 NSLT01000040.1 Protein Homology CDS 146 1099 . - 0 ID=cds-PDP76765.1;Parent=gene-CLI76_07860;Dbxref=NCBI_GP:PDP76765.1;Name=PDP76765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965549.1;locus_tag=CLI76_07860;product=glycerate dehydrogenase;protein_id=PDP76765.1;transl_table=11 NSLT01000040.1 Genbank gene 1340 3220 . - . ID=gene-CLI76_07865;Name=CLI76_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07865 NSLT01000040.1 Protein Homology CDS 1340 3220 . - 0 ID=cds-PDP76766.1;Parent=gene-CLI76_07865;Dbxref=NCBI_GP:PDP76766.1;Name=PDP76766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815941.1;locus_tag=CLI76_07865;product=DUF349 domain-containing protein;protein_id=PDP76766.1;transl_table=11 NSLT01000040.1 Genbank pseudogene 3480 3644 . + . ID=gene-CLI76_07870;Name=CLI76_07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_07870;pseudo=true NSLT01000040.1 Protein Homology CDS 3480 3644 . + 0 ID=cds-CLI76_07870;Parent=gene-CLI76_07870;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874214.1;locus_tag=CLI76_07870;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLT01000040.1 Genbank gene 4165 5556 . + . ID=gene-CLI76_07875;Name=CLI76_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07875 NSLT01000040.1 Protein Homology CDS 4165 5556 . + 0 ID=cds-PDP76767.1;Parent=gene-CLI76_07875;Dbxref=NCBI_GP:PDP76767.1;Name=PDP76767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584475.1;locus_tag=CLI76_07875;product=lipase;protein_id=PDP76767.1;transl_table=11 NSLT01000040.1 Genbank gene 5561 6367 . + . ID=gene-CLI76_07880;Name=CLI76_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07880 NSLT01000040.1 Protein Homology CDS 5561 6367 . + 0 ID=cds-PDP76768.1;Parent=gene-CLI76_07880;Dbxref=NCBI_GP:PDP76768.1;Name=PDP76768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584474.1;locus_tag=CLI76_07880;product=lipase;protein_id=PDP76768.1;transl_table=11 NSLT01000040.1 Genbank gene 6407 7924 . + . ID=gene-CLI76_07885;Name=CLI76_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07885 NSLT01000040.1 Protein Homology CDS 6407 7924 . + 0 ID=cds-PDP76769.1;Parent=gene-CLI76_07885;Dbxref=NCBI_GP:PDP76769.1;Name=PDP76769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964407.1;locus_tag=CLI76_07885;product=MBOAT family protein;protein_id=PDP76769.1;transl_table=11 NSLT01000040.1 Genbank gene 8775 9374 . + . ID=gene-CLI76_07890;Name=CLI76_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07890 NSLT01000040.1 Protein Homology CDS 8775 9374 . + 0 ID=cds-PDP76777.1;Parent=gene-CLI76_07890;Dbxref=NCBI_GP:PDP76777.1;Name=PDP76777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815934.1;locus_tag=CLI76_07890;product=TetR/AcrR family transcriptional regulator;protein_id=PDP76777.1;transl_table=11 NSLT01000040.1 Genbank gene 9415 11820 . + . ID=gene-CLI76_07895;Name=CLI76_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07895 NSLT01000040.1 Protein Homology CDS 9415 11820 . + 0 ID=cds-PDP76770.1;Parent=gene-CLI76_07895;Dbxref=NCBI_GP:PDP76770.1;Name=PDP76770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457904.1;locus_tag=CLI76_07895;product=hypothetical protein;protein_id=PDP76770.1;transl_table=11 NSLT01000040.1 Genbank gene 11925 12689 . + . ID=gene-CLI76_07900;Name=CLI76_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07900 NSLT01000040.1 Protein Homology CDS 11925 12689 . + 0 ID=cds-PDP76778.1;Parent=gene-CLI76_07900;Dbxref=NCBI_GP:PDP76778.1;Name=PDP76778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965372.1;locus_tag=CLI76_07900;product=outer membrane lipoprotein-sorting protein;protein_id=PDP76778.1;transl_table=11 NSLT01000040.1 Genbank gene 12693 13970 . + . ID=gene-CLI76_07905;Name=CLI76_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07905 NSLT01000040.1 Protein Homology CDS 12693 13970 . + 0 ID=cds-PDP76771.1;Parent=gene-CLI76_07905;Dbxref=NCBI_GP:PDP76771.1;Name=PDP76771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815932.1;locus_tag=CLI76_07905;product=hypothetical protein;protein_id=PDP76771.1;transl_table=11 NSLT01000040.1 Genbank gene 13995 15749 . + . ID=gene-CLI76_07910;Name=CLI76_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07910 NSLT01000040.1 Protein Homology CDS 13995 15749 . + 0 ID=cds-PDP76772.1;Parent=gene-CLI76_07910;Dbxref=NCBI_GP:PDP76772.1;Name=PDP76772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584470.1;locus_tag=CLI76_07910;product=ABC transporter ATP-binding protein;protein_id=PDP76772.1;transl_table=11 NSLT01000040.1 Genbank gene 15796 17502 . + . ID=gene-CLI76_07915;Name=CLI76_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07915 NSLT01000040.1 Protein Homology CDS 15796 17502 . + 0 ID=cds-PDP76773.1;Parent=gene-CLI76_07915;Dbxref=NCBI_GP:PDP76773.1;Name=PDP76773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873508.1;locus_tag=CLI76_07915;product=ABC transporter ATP-binding protein;protein_id=PDP76773.1;transl_table=11 NSLT01000040.1 Genbank gene 17795 18091 . - . ID=gene-CLI76_07920;Name=CLI76_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07920 NSLT01000040.1 Protein Homology CDS 17795 18091 . - 0 ID=cds-PDP76774.1;Parent=gene-CLI76_07920;Dbxref=NCBI_GP:PDP76774.1;Name=PDP76774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI76_07920;product=hypothetical protein;protein_id=PDP76774.1;transl_table=11 NSLT01000040.1 Genbank gene 18302 20011 . + . ID=gene-CLI76_07925;Name=CLI76_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07925 NSLT01000040.1 Protein Homology CDS 18302 20011 . + 0 ID=cds-PDP76775.1;Parent=gene-CLI76_07925;Dbxref=NCBI_GP:PDP76775.1;Name=PDP76775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815928.1;locus_tag=CLI76_07925;product=peptidase S41;protein_id=PDP76775.1;transl_table=11 NSLT01000040.1 Genbank gene 20325 21413 . - . ID=gene-CLI76_07930;Name=CLI76_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07930 NSLT01000040.1 Protein Homology CDS 20325 21413 . - 0 ID=cds-PDP76776.1;Parent=gene-CLI76_07930;Dbxref=NCBI_GP:PDP76776.1;Name=PDP76776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873637.1;locus_tag=CLI76_07930;product=ISAs1 family transposase;protein_id=PDP76776.1;transl_table=11 ##sequence-region NSLT01000041.1 1 20970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000041.1 Genbank region 1 20970 . + . ID=NSLT01000041.1:1..20970;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000041.1 Genbank gene 446 1012 . - . ID=gene-CLI76_07935;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CLI76_07935 NSLT01000041.1 Protein Homology CDS 446 1012 . - 0 ID=cds-PDP76746.1;Parent=gene-CLI76_07935;Dbxref=NCBI_GP:PDP76746.1;Name=PDP76746.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467438.1;locus_tag=CLI76_07935;product=elongation factor P;protein_id=PDP76746.1;transl_table=11 NSLT01000041.1 Genbank gene 1144 2700 . - . ID=gene-CLI76_07940;Name=CLI76_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07940 NSLT01000041.1 Protein Homology CDS 1144 2700 . - 0 ID=cds-PDP76747.1;Parent=gene-CLI76_07940;Dbxref=NCBI_GP:PDP76747.1;Name=PDP76747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585110.1;locus_tag=CLI76_07940;product=hypothetical protein;protein_id=PDP76747.1;transl_table=11 NSLT01000041.1 Genbank gene 2896 3909 . + . ID=gene-CLI76_07945;Name=CLI76_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07945 NSLT01000041.1 Protein Homology CDS 2896 3909 . + 0 ID=cds-PDP76748.1;Parent=gene-CLI76_07945;Dbxref=NCBI_GP:PDP76748.1;Name=PDP76748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457650.1;locus_tag=CLI76_07945;product=aspartate-semialdehyde dehydrogenase;protein_id=PDP76748.1;transl_table=11 NSLT01000041.1 Genbank gene 4245 4463 . + . ID=gene-CLI76_07950;Name=CLI76_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07950 NSLT01000041.1 GeneMarkS+ CDS 4245 4463 . + 0 ID=cds-PDP76749.1;Parent=gene-CLI76_07950;Dbxref=NCBI_GP:PDP76749.1;Name=PDP76749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_07950;product=hypothetical protein;protein_id=PDP76749.1;transl_table=11 NSLT01000041.1 Genbank gene 4579 5514 . + . ID=gene-CLI76_07955;Name=CLI76_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07955 NSLT01000041.1 Protein Homology CDS 4579 5514 . + 0 ID=cds-PDP76750.1;Parent=gene-CLI76_07955;Dbxref=NCBI_GP:PDP76750.1;Name=PDP76750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457652.1;locus_tag=CLI76_07955;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=PDP76750.1;transl_table=11 NSLT01000041.1 Genbank gene 5514 5987 . + . ID=gene-CLI76_07960;Name=CLI76_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07960 NSLT01000041.1 Protein Homology CDS 5514 5987 . + 0 ID=cds-PDP76751.1;Parent=gene-CLI76_07960;Dbxref=NCBI_GP:PDP76751.1;Name=PDP76751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816331.1;locus_tag=CLI76_07960;product=hypothetical protein;protein_id=PDP76751.1;transl_table=11 NSLT01000041.1 Genbank gene 5997 8198 . + . ID=gene-CLI76_07965;Name=CLI76_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07965 NSLT01000041.1 Protein Homology CDS 5997 8198 . + 0 ID=cds-PDP76752.1;Parent=gene-CLI76_07965;Dbxref=NCBI_GP:PDP76752.1;Name=PDP76752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964989.1;locus_tag=CLI76_07965;product=penicillin-binding protein;protein_id=PDP76752.1;transl_table=11 NSLT01000041.1 Genbank gene 8209 9672 . + . ID=gene-CLI76_07970;Name=CLI76_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07970 NSLT01000041.1 Protein Homology CDS 8209 9672 . + 0 ID=cds-PDP76753.1;Parent=gene-CLI76_07970;Dbxref=NCBI_GP:PDP76753.1;Name=PDP76753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964990.1;locus_tag=CLI76_07970;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=PDP76753.1;transl_table=11 NSLT01000041.1 Genbank gene 9687 10946 . + . ID=gene-CLI76_07975;Name=CLI76_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07975 NSLT01000041.1 Protein Homology CDS 9687 10946 . + 0 ID=cds-PDP76754.1;Parent=gene-CLI76_07975;Dbxref=NCBI_GP:PDP76754.1;Name=PDP76754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585117.1;locus_tag=CLI76_07975;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=PDP76754.1;transl_table=11 NSLT01000041.1 Genbank gene 10970 12322 . + . ID=gene-CLI76_07980;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CLI76_07980 NSLT01000041.1 Protein Homology CDS 10970 12322 . + 0 ID=cds-PDP76755.1;Parent=gene-CLI76_07980;Dbxref=NCBI_GP:PDP76755.1;Name=PDP76755.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816334.1;locus_tag=CLI76_07980;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=PDP76755.1;transl_table=11 NSLT01000041.1 Genbank gene 12334 13590 . + . ID=gene-CLI76_07985;Name=CLI76_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07985 NSLT01000041.1 Protein Homology CDS 12334 13590 . + 0 ID=cds-PDP76756.1;Parent=gene-CLI76_07985;Dbxref=NCBI_GP:PDP76756.1;Name=PDP76756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457658.1;locus_tag=CLI76_07985;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=PDP76756.1;transl_table=11 NSLT01000041.1 Genbank gene 13587 14726 . + . ID=gene-CLI76_07990;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CLI76_07990 NSLT01000041.1 Protein Homology CDS 13587 14726 . + 0 ID=cds-PDP76757.1;Parent=gene-CLI76_07990;Dbxref=NCBI_GP:PDP76757.1;Name=PDP76757.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585120.1;locus_tag=CLI76_07990;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=PDP76757.1;transl_table=11 NSLT01000041.1 Genbank gene 14726 16096 . + . ID=gene-CLI76_07995;Name=CLI76_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_07995 NSLT01000041.1 Protein Homology CDS 14726 16096 . + 0 ID=cds-PDP76758.1;Parent=gene-CLI76_07995;Dbxref=NCBI_GP:PDP76758.1;Name=PDP76758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873943.1;locus_tag=CLI76_07995;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=PDP76758.1;transl_table=11 NSLT01000041.1 Genbank gene 16090 16866 . + . ID=gene-CLI76_08000;Name=CLI76_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08000 NSLT01000041.1 Protein Homology CDS 16090 16866 . + 0 ID=cds-PDP76759.1;Parent=gene-CLI76_08000;Dbxref=NCBI_GP:PDP76759.1;Name=PDP76759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873944.1;locus_tag=CLI76_08000;product=cell division protein FtsQ;protein_id=PDP76759.1;transl_table=11 NSLT01000041.1 Genbank gene 16924 18354 . + . ID=gene-CLI76_08005;Name=CLI76_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08005 NSLT01000041.1 Protein Homology CDS 16924 18354 . + 0 ID=cds-PDP76760.1;Parent=gene-CLI76_08005;Dbxref=NCBI_GP:PDP76760.1;Name=PDP76760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457662.1;locus_tag=CLI76_08005;product=cell division protein FtsA;protein_id=PDP76760.1;transl_table=11 NSLT01000041.1 Genbank gene 18357 19730 . + . ID=gene-CLI76_08010;Name=CLI76_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08010 NSLT01000041.1 Protein Homology CDS 18357 19730 . + 0 ID=cds-PDP76761.1;Parent=gene-CLI76_08010;Dbxref=NCBI_GP:PDP76761.1;Name=PDP76761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585124.1;locus_tag=CLI76_08010;product=cell division protein FtsZ;protein_id=PDP76761.1;transl_table=11 NSLT01000041.1 Genbank gene 19762 20211 . + . ID=gene-CLI76_08015;Name=CLI76_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08015 NSLT01000041.1 Protein Homology CDS 19762 20211 . + 0 ID=cds-PDP76762.1;Parent=gene-CLI76_08015;Dbxref=NCBI_GP:PDP76762.1;Name=PDP76762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585125.1;locus_tag=CLI76_08015;product=glutamyl-tRNA amidotransferase;protein_id=PDP76762.1;transl_table=11 NSLT01000041.1 Genbank gene 20180 20401 . - . ID=gene-CLI76_08020;Name=CLI76_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08020 NSLT01000041.1 Protein Homology CDS 20180 20401 . - 0 ID=cds-PDP76763.1;Parent=gene-CLI76_08020;Dbxref=NCBI_GP:PDP76763.1;Name=PDP76763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815534.1;locus_tag=CLI76_08020;product=hypothetical protein;protein_id=PDP76763.1;transl_table=11 NSLT01000041.1 Genbank gene 20857 20970 . - . ID=gene-CLI76_08025;Name=CLI76_08025;end_range=20970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08025;partial=true NSLT01000041.1 Protein Homology CDS 20857 20970 . - 0 ID=cds-PDP76764.1;Parent=gene-CLI76_08025;Dbxref=NCBI_GP:PDP76764.1;Name=PDP76764.1;end_range=20970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_08025;partial=true;product=ISAs1 family transposase;protein_id=PDP76764.1;transl_table=11 ##sequence-region NSLT01000042.1 1 20954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000042.1 Genbank region 1 20954 . + . ID=NSLT01000042.1:1..20954;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000042.1 Genbank gene 1 769 . - . ID=gene-CLI76_08030;Name=CLI76_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08030;partial=true;start_range=.,1 NSLT01000042.1 Protein Homology CDS 1 769 . - 0 ID=cds-PDP76728.1;Parent=gene-CLI76_08030;Dbxref=NCBI_GP:PDP76728.1;Name=PDP76728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_08030;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76728.1;start_range=.,1;transl_table=11 NSLT01000042.1 Genbank gene 1231 3108 . + . ID=gene-CLI76_08035;Name=CLI76_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08035 NSLT01000042.1 Protein Homology CDS 1231 3108 . + 0 ID=cds-PDP76729.1;Parent=gene-CLI76_08035;Dbxref=NCBI_GP:PDP76729.1;Name=PDP76729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583642.1;locus_tag=CLI76_08035;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=PDP76729.1;transl_table=11 NSLT01000042.1 Genbank gene 3139 4941 . + . ID=gene-CLI76_08040;Name=CLI76_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08040 NSLT01000042.1 Protein Homology CDS 3139 4941 . + 0 ID=cds-PDP76730.1;Parent=gene-CLI76_08040;Dbxref=NCBI_GP:PDP76730.1;Name=PDP76730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964667.1;locus_tag=CLI76_08040;product=excinuclease ABC subunit UvrC;protein_id=PDP76730.1;transl_table=11 NSLT01000042.1 Genbank gene 4948 5400 . + . ID=gene-CLI76_08045;Name=CLI76_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08045 NSLT01000042.1 Protein Homology CDS 4948 5400 . + 0 ID=cds-PDP76731.1;Parent=gene-CLI76_08045;Dbxref=NCBI_GP:PDP76731.1;Name=PDP76731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815277.1;locus_tag=CLI76_08045;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=PDP76731.1;transl_table=11 NSLT01000042.1 Genbank gene 5405 5755 . + . ID=gene-CLI76_08050;Name=CLI76_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08050 NSLT01000042.1 Protein Homology CDS 5405 5755 . + 0 ID=cds-PDP76732.1;Parent=gene-CLI76_08050;Dbxref=NCBI_GP:PDP76732.1;Name=PDP76732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458625.1;locus_tag=CLI76_08050;product=pyrophosphatase;protein_id=PDP76732.1;transl_table=11 NSLT01000042.1 Genbank gene 5742 6611 . + . ID=gene-CLI76_08055;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CLI76_08055 NSLT01000042.1 Protein Homology CDS 5742 6611 . + 0 ID=cds-PDP76733.1;Parent=gene-CLI76_08055;Dbxref=NCBI_GP:PDP76733.1;Name=PDP76733.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956466.1;locus_tag=CLI76_08055;product=deoxyribose-phosphate aldolase;protein_id=PDP76733.1;transl_table=11 NSLT01000042.1 Genbank gene 6922 7896 . - . ID=gene-CLI76_08060;Name=CLI76_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08060 NSLT01000042.1 Protein Homology CDS 6922 7896 . - 0 ID=cds-PDP76734.1;Parent=gene-CLI76_08060;Dbxref=NCBI_GP:PDP76734.1;Name=PDP76734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583648.1;locus_tag=CLI76_08060;product=polyprenyl synthetase;protein_id=PDP76734.1;transl_table=11 NSLT01000042.1 Genbank gene 7954 8592 . - . ID=gene-CLI76_08065;Name=CLI76_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08065 NSLT01000042.1 Protein Homology CDS 7954 8592 . - 0 ID=cds-PDP76735.1;Parent=gene-CLI76_08065;Dbxref=NCBI_GP:PDP76735.1;Name=PDP76735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458629.1;locus_tag=CLI76_08065;product=hypothetical protein;protein_id=PDP76735.1;transl_table=11 NSLT01000042.1 Genbank gene 8613 9239 . - . ID=gene-CLI76_08070;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI76_08070 NSLT01000042.1 Protein Homology CDS 8613 9239 . - 0 ID=cds-PDP76736.1;Parent=gene-CLI76_08070;Dbxref=NCBI_GP:PDP76736.1;Name=PDP76736.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458630.1;locus_tag=CLI76_08070;product=signal peptidase I;protein_id=PDP76736.1;transl_table=11 NSLT01000042.1 Genbank gene 9229 10626 . - . ID=gene-CLI76_08075;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CLI76_08075 NSLT01000042.1 Protein Homology CDS 9229 10626 . - 0 ID=cds-PDP76737.1;Parent=gene-CLI76_08075;Dbxref=NCBI_GP:PDP76737.1;Name=PDP76737.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458631.1;locus_tag=CLI76_08075;product=signal peptidase I;protein_id=PDP76737.1;transl_table=11 NSLT01000042.1 Genbank gene 10642 11358 . - . ID=gene-CLI76_08080;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CLI76_08080 NSLT01000042.1 Protein Homology CDS 10642 11358 . - 0 ID=cds-PDP76738.1;Parent=gene-CLI76_08080;Dbxref=NCBI_GP:PDP76738.1;Name=PDP76738.1;gbkey=CDS;gene=dapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964658.1;locus_tag=CLI76_08080;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=PDP76738.1;transl_table=11 NSLT01000042.1 Genbank gene 11419 12762 . - . ID=gene-CLI76_08085;Name=CLI76_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08085 NSLT01000042.1 Protein Homology CDS 11419 12762 . - 0 ID=cds-PDP76739.1;Parent=gene-CLI76_08085;Dbxref=NCBI_GP:PDP76739.1;Name=PDP76739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964657.1;locus_tag=CLI76_08085;product=dehydrogenase;protein_id=PDP76739.1;transl_table=11 NSLT01000042.1 Genbank gene 12906 13898 . - . ID=gene-CLI76_08090;Name=CLI76_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08090 NSLT01000042.1 Protein Homology CDS 12906 13898 . - 0 ID=cds-PDP76740.1;Parent=gene-CLI76_08090;Dbxref=NCBI_GP:PDP76740.1;Name=PDP76740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458633.1;locus_tag=CLI76_08090;product=putative sulfate exporter family transporter;protein_id=PDP76740.1;transl_table=11 NSLT01000042.1 Genbank gene 14408 14767 . + . ID=gene-CLI76_08095;Name=CLI76_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08095 NSLT01000042.1 Protein Homology CDS 14408 14767 . + 0 ID=cds-PDP76741.1;Parent=gene-CLI76_08095;Dbxref=NCBI_GP:PDP76741.1;Name=PDP76741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458635.1;locus_tag=CLI76_08095;product=hypothetical protein;protein_id=PDP76741.1;transl_table=11 NSLT01000042.1 Genbank gene 15074 17575 . + . ID=gene-CLI76_08100;Name=CLI76_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08100 NSLT01000042.1 Protein Homology CDS 15074 17575 . + 0 ID=cds-PDP76742.1;Parent=gene-CLI76_08100;Dbxref=NCBI_GP:PDP76742.1;Name=PDP76742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815288.1;locus_tag=CLI76_08100;product=TonB-dependent receptor;protein_id=PDP76742.1;transl_table=11 NSLT01000042.1 Genbank gene 18150 18887 . + . ID=gene-CLI76_08105;Name=CLI76_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08105 NSLT01000042.1 Protein Homology CDS 18150 18887 . + 0 ID=cds-PDP76743.1;Parent=gene-CLI76_08105;Dbxref=NCBI_GP:PDP76743.1;Name=PDP76743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815289.1;locus_tag=CLI76_08105;product=DNA repair protein RecO;protein_id=PDP76743.1;transl_table=11 NSLT01000042.1 Genbank gene 18960 20708 . + . ID=gene-CLI76_08110;Name=CLI76_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08110 NSLT01000042.1 Protein Homology CDS 18960 20708 . + 0 ID=cds-PDP76744.1;Parent=gene-CLI76_08110;Dbxref=NCBI_GP:PDP76744.1;Name=PDP76744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815290.1;locus_tag=CLI76_08110;product=phospho-sugar mutase;protein_id=PDP76744.1;transl_table=11 NSLT01000042.1 Genbank gene 20841 20954 . - . ID=gene-CLI76_08115;Name=CLI76_08115;end_range=20954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08115;partial=true NSLT01000042.1 Protein Homology CDS 20841 20954 . - 0 ID=cds-PDP76745.1;Parent=gene-CLI76_08115;Dbxref=NCBI_GP:PDP76745.1;Name=PDP76745.1;end_range=20954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_08115;partial=true;product=IS982 family transposase;protein_id=PDP76745.1;transl_table=11 ##sequence-region NSLT01000043.1 1 20429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000043.1 Genbank region 1 20429 . + . ID=NSLT01000043.1:1..20429;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000043.1 Genbank pseudogene 134 328 . - . ID=gene-CLI76_08120;Name=CLI76_08120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08120;pseudo=true NSLT01000043.1 Protein Homology CDS 134 328 . - 0 ID=cds-CLI76_08120;Parent=gene-CLI76_08120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815526.1;locus_tag=CLI76_08120;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000043.1 Genbank gene 419 3625 . + . ID=gene-CLI76_08125;Name=CLI76_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08125 NSLT01000043.1 Protein Homology CDS 419 3625 . + 0 ID=cds-PDP76712.1;Parent=gene-CLI76_08125;Dbxref=NCBI_GP:PDP76712.1;Name=PDP76712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584128.1;locus_tag=CLI76_08125;product=beta-galactosidase;protein_id=PDP76712.1;transl_table=11 NSLT01000043.1 Genbank gene 4044 5738 . - . ID=gene-CLI76_08130;Name=CLI76_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08130 NSLT01000043.1 Protein Homology CDS 4044 5738 . - 0 ID=cds-PDP76713.1;Parent=gene-CLI76_08130;Dbxref=NCBI_GP:PDP76713.1;Name=PDP76713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584129.1;locus_tag=CLI76_08130;product=alpha-amylase;protein_id=PDP76713.1;transl_table=11 NSLT01000043.1 Genbank gene 5735 6526 . - . ID=gene-CLI76_08135;Name=CLI76_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08135 NSLT01000043.1 Protein Homology CDS 5735 6526 . - 0 ID=cds-PDP76714.1;Parent=gene-CLI76_08135;Dbxref=NCBI_GP:PDP76714.1;Name=PDP76714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875170.1;locus_tag=CLI76_08135;product=phospholipase;protein_id=PDP76714.1;transl_table=11 NSLT01000043.1 Genbank gene 6673 7836 . - . ID=gene-CLI76_08140;Name=CLI76_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08140 NSLT01000043.1 Protein Homology CDS 6673 7836 . - 0 ID=cds-PDP76715.1;Parent=gene-CLI76_08140;Dbxref=NCBI_GP:PDP76715.1;Name=PDP76715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875221.1;locus_tag=CLI76_08140;product=cytochrome C oxidase assembly protein;protein_id=PDP76715.1;transl_table=11 NSLT01000043.1 Genbank gene 7882 9471 . - . ID=gene-CLI76_08145;Name=CLI76_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08145 NSLT01000043.1 Protein Homology CDS 7882 9471 . - 0 ID=cds-PDP76716.1;Parent=gene-CLI76_08145;Dbxref=NCBI_GP:PDP76716.1;Name=PDP76716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584132.1;locus_tag=CLI76_08145;product=cytochrome ubiquinol oxidase subunit I;protein_id=PDP76716.1;transl_table=11 NSLT01000043.1 Genbank gene 9491 9739 . - . ID=gene-CLI76_08150;Name=CLI76_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08150 NSLT01000043.1 Protein Homology CDS 9491 9739 . - 0 ID=cds-PDP76717.1;Parent=gene-CLI76_08150;Dbxref=NCBI_GP:PDP76717.1;Name=PDP76717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584133.1;locus_tag=CLI76_08150;product=DUF4492 domain-containing protein;protein_id=PDP76717.1;transl_table=11 NSLT01000043.1 Genbank gene 9922 12147 . - . ID=gene-CLI76_08155;Name=CLI76_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08155 NSLT01000043.1 Protein Homology CDS 9922 12147 . - 0 ID=cds-PDP76718.1;Parent=gene-CLI76_08155;Dbxref=NCBI_GP:PDP76718.1;Name=PDP76718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965329.1;locus_tag=CLI76_08155;product=alpha-mannosidase;protein_id=PDP76718.1;transl_table=11 NSLT01000043.1 Genbank gene 12274 12816 . - . ID=gene-CLI76_08160;Name=CLI76_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08160 NSLT01000043.1 Protein Homology CDS 12274 12816 . - 0 ID=cds-PDP76719.1;Parent=gene-CLI76_08160;Dbxref=NCBI_GP:PDP76719.1;Name=PDP76719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965330.1;locus_tag=CLI76_08160;product=arginine decarboxylase;protein_id=PDP76719.1;transl_table=11 NSLT01000043.1 Genbank gene 13435 13779 . - . ID=gene-CLI76_08165;Name=CLI76_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08165 NSLT01000043.1 GeneMarkS+ CDS 13435 13779 . - 0 ID=cds-PDP76720.1;Parent=gene-CLI76_08165;Dbxref=NCBI_GP:PDP76720.1;Name=PDP76720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_08165;product=hypothetical protein;protein_id=PDP76720.1;transl_table=11 NSLT01000043.1 Genbank gene 13840 14292 . + . ID=gene-CLI76_08170;Name=CLI76_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08170 NSLT01000043.1 Protein Homology CDS 13840 14292 . + 0 ID=cds-PDP76721.1;Parent=gene-CLI76_08170;Dbxref=NCBI_GP:PDP76721.1;Name=PDP76721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875225.1;locus_tag=CLI76_08170;product=hypothetical protein;protein_id=PDP76721.1;transl_table=11 NSLT01000043.1 Genbank gene 14404 14895 . - . ID=gene-CLI76_08175;Name=CLI76_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08175 NSLT01000043.1 Protein Homology CDS 14404 14895 . - 0 ID=cds-PDP76722.1;Parent=gene-CLI76_08175;Dbxref=NCBI_GP:PDP76722.1;Name=PDP76722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815693.1;locus_tag=CLI76_08175;product=DNA-deoxyinosine glycosylase;protein_id=PDP76722.1;transl_table=11 NSLT01000043.1 Genbank gene 14912 16213 . - . ID=gene-CLI76_08180;Name=CLI76_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08180 NSLT01000043.1 Protein Homology CDS 14912 16213 . - 0 ID=cds-PDP76723.1;Parent=gene-CLI76_08180;Dbxref=NCBI_GP:PDP76723.1;Name=PDP76723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584141.1;locus_tag=CLI76_08180;product=serine dehydratase subunit alpha family protein;protein_id=PDP76723.1;transl_table=11 NSLT01000043.1 Genbank gene 16268 16840 . - . ID=gene-CLI76_08185;Name=CLI76_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08185 NSLT01000043.1 Protein Homology CDS 16268 16840 . - 0 ID=cds-PDP76724.1;Parent=gene-CLI76_08185;Dbxref=NCBI_GP:PDP76724.1;Name=PDP76724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875195.1;locus_tag=CLI76_08185;product=hypothetical protein;protein_id=PDP76724.1;transl_table=11 NSLT01000043.1 Genbank gene 16966 18531 . - . ID=gene-CLI76_08190;Name=CLI76_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08190 NSLT01000043.1 Protein Homology CDS 16966 18531 . - 0 ID=cds-PDP76725.1;Parent=gene-CLI76_08190;Dbxref=NCBI_GP:PDP76725.1;Name=PDP76725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815696.1;locus_tag=CLI76_08190;product=sugar transporter;protein_id=PDP76725.1;transl_table=11 NSLT01000043.1 Genbank pseudogene 18560 18862 . - . ID=gene-CLI76_08195;Name=CLI76_08195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08195;pseudo=true NSLT01000043.1 Protein Homology CDS 18560 18862 . - 0 ID=cds-CLI76_08195;Parent=gene-CLI76_08195;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584144.1;locus_tag=CLI76_08195;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000043.1 Genbank gene 18879 19592 . - . ID=gene-CLI76_08200;Name=CLI76_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08200 NSLT01000043.1 Protein Homology CDS 18879 19592 . - 0 ID=cds-PDP76726.1;Parent=gene-CLI76_08200;Dbxref=NCBI_GP:PDP76726.1;Name=PDP76726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964571.1;locus_tag=CLI76_08200;product=hypothetical protein;protein_id=PDP76726.1;transl_table=11 NSLT01000043.1 Genbank gene 19810 20202 . + . ID=gene-CLI76_08205;Name=CLI76_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08205 NSLT01000043.1 Protein Homology CDS 19810 20202 . + 0 ID=cds-PDP76727.1;Parent=gene-CLI76_08205;Dbxref=NCBI_GP:PDP76727.1;Name=PDP76727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875191.1;locus_tag=CLI76_08205;product=hypothetical protein;protein_id=PDP76727.1;transl_table=11 ##sequence-region NSLT01000044.1 1 19662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000044.1 Genbank region 1 19662 . + . ID=NSLT01000044.1:1..19662;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000044.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_08210;Name=CLI76_08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08210;pseudo=true NSLT01000044.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_08210;Parent=gene-CLI76_08210;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_08210;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000044.1 Genbank gene 1033 1710 . + . ID=gene-CLI76_08215;Name=CLI76_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08215 NSLT01000044.1 Protein Homology CDS 1033 1710 . + 0 ID=cds-PDP76695.1;Parent=gene-CLI76_08215;Dbxref=NCBI_GP:PDP76695.1;Name=PDP76695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458475.1;locus_tag=CLI76_08215;product=hypothetical protein;protein_id=PDP76695.1;transl_table=11 NSLT01000044.1 Genbank gene 1787 2809 . + . ID=gene-CLI76_08220;Name=CLI76_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08220 NSLT01000044.1 Protein Homology CDS 1787 2809 . + 0 ID=cds-PDP76696.1;Parent=gene-CLI76_08220;Dbxref=NCBI_GP:PDP76696.1;Name=PDP76696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964230.1;locus_tag=CLI76_08220;product=phenylalanine--tRNA ligase subunit alpha;protein_id=PDP76696.1;transl_table=11 NSLT01000044.1 Genbank gene 2828 3502 . + . ID=gene-CLI76_08225;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CLI76_08225 NSLT01000044.1 Protein Homology CDS 2828 3502 . + 0 ID=cds-PDP76697.1;Parent=gene-CLI76_08225;Dbxref=NCBI_GP:PDP76697.1;Name=PDP76697.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964231.1;locus_tag=CLI76_08225;product=endonuclease III;protein_id=PDP76697.1;transl_table=11 NSLT01000044.1 Genbank gene 3564 4901 . + . ID=gene-CLI76_08230;Name=CLI76_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08230 NSLT01000044.1 Protein Homology CDS 3564 4901 . + 0 ID=cds-PDP76698.1;Parent=gene-CLI76_08230;Dbxref=NCBI_GP:PDP76698.1;Name=PDP76698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584723.1;locus_tag=CLI76_08230;product=PAP2 family protein;protein_id=PDP76698.1;transl_table=11 NSLT01000044.1 Genbank gene 4878 8246 . - . ID=gene-CLI76_08235;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CLI76_08235 NSLT01000044.1 Protein Homology CDS 4878 8246 . - 0 ID=cds-PDP76699.1;Parent=gene-CLI76_08235;Dbxref=NCBI_GP:PDP76699.1;Name=PDP76699.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584722.1;locus_tag=CLI76_08235;product=transcription-repair coupling factor;protein_id=PDP76699.1;transl_table=11 NSLT01000044.1 Genbank gene 8593 9177 . + . ID=gene-CLI76_08240;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CLI76_08240 NSLT01000044.1 Protein Homology CDS 8593 9177 . + 0 ID=cds-PDP76700.1;Parent=gene-CLI76_08240;Dbxref=NCBI_GP:PDP76700.1;Name=PDP76700.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458479.1;locus_tag=CLI76_08240;product=nucleotide exchange factor GrpE;protein_id=PDP76700.1;transl_table=11 NSLT01000044.1 Genbank gene 9221 10372 . + . ID=gene-CLI76_08245;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CLI76_08245 NSLT01000044.1 Protein Homology CDS 9221 10372 . + 0 ID=cds-PDP76701.1;Parent=gene-CLI76_08245;Dbxref=NCBI_GP:PDP76701.1;Name=PDP76701.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584720.1;locus_tag=CLI76_08245;product=molecular chaperone DnaJ;protein_id=PDP76701.1;transl_table=11 NSLT01000044.1 Genbank gene 10458 10775 . + . ID=gene-CLI76_08250;Name=CLI76_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08250 NSLT01000044.1 Protein Homology CDS 10458 10775 . + 0 ID=cds-PDP76702.1;Parent=gene-CLI76_08250;Dbxref=NCBI_GP:PDP76702.1;Name=PDP76702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146258.1;locus_tag=CLI76_08250;product=DUF59 domain-containing protein;protein_id=PDP76702.1;transl_table=11 NSLT01000044.1 Genbank gene 10804 11592 . + . ID=gene-CLI76_08255;Name=CLI76_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08255 NSLT01000044.1 Protein Homology CDS 10804 11592 . + 0 ID=cds-PDP76703.1;Parent=gene-CLI76_08255;Dbxref=NCBI_GP:PDP76703.1;Name=PDP76703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458482.1;locus_tag=CLI76_08255;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=PDP76703.1;transl_table=11 NSLT01000044.1 Genbank gene 11674 12168 . + . ID=gene-CLI76_08260;Name=CLI76_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08260 NSLT01000044.1 Protein Homology CDS 11674 12168 . + 0 ID=cds-PDP76711.1;Parent=gene-CLI76_08260;Dbxref=NCBI_GP:PDP76711.1;Name=PDP76711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873740.1;locus_tag=CLI76_08260;product=O-acetyl-ADP-ribose deacetylase;protein_id=PDP76711.1;transl_table=11 NSLT01000044.1 Genbank gene 12535 13722 . + . ID=gene-CLI76_08265;Name=CLI76_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08265 NSLT01000044.1 Protein Homology CDS 12535 13722 . + 0 ID=cds-PDP76704.1;Parent=gene-CLI76_08265;Dbxref=NCBI_GP:PDP76704.1;Name=PDP76704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816088.1;locus_tag=CLI76_08265;product=8-amino-7-oxononanoate synthase;protein_id=PDP76704.1;transl_table=11 NSLT01000044.1 Genbank gene 13777 14400 . + . ID=gene-CLI76_08270;Name=CLI76_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08270 NSLT01000044.1 Protein Homology CDS 13777 14400 . + 0 ID=cds-PDP76705.1;Parent=gene-CLI76_08270;Dbxref=NCBI_GP:PDP76705.1;Name=PDP76705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873721.1;locus_tag=CLI76_08270;product=uridine kinase;protein_id=PDP76705.1;transl_table=11 NSLT01000044.1 Genbank gene 14442 15629 . + . ID=gene-CLI76_08275;Name=CLI76_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08275 NSLT01000044.1 Protein Homology CDS 14442 15629 . + 0 ID=cds-PDP76706.1;Parent=gene-CLI76_08275;Dbxref=NCBI_GP:PDP76706.1;Name=PDP76706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816087.1;locus_tag=CLI76_08275;product=DUF2029 domain-containing protein;protein_id=PDP76706.1;transl_table=11 NSLT01000044.1 Genbank gene 15616 16326 . + . ID=gene-CLI76_08280;Name=CLI76_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08280 NSLT01000044.1 Protein Homology CDS 15616 16326 . + 0 ID=cds-PDP76707.1;Parent=gene-CLI76_08280;Dbxref=NCBI_GP:PDP76707.1;Name=PDP76707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956403.1;locus_tag=CLI76_08280;product=glycosyl transferase family 2;protein_id=PDP76707.1;transl_table=11 NSLT01000044.1 Genbank gene 16314 17108 . + . ID=gene-CLI76_08285;Name=CLI76_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08285 NSLT01000044.1 Protein Homology CDS 16314 17108 . + 0 ID=cds-PDP76708.1;Parent=gene-CLI76_08285;Dbxref=NCBI_GP:PDP76708.1;Name=PDP76708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873735.1;locus_tag=CLI76_08285;product=hypothetical protein;protein_id=PDP76708.1;transl_table=11 NSLT01000044.1 Genbank pseudogene 17350 17546 . - . ID=gene-CLI76_08290;Name=CLI76_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08290;pseudo=true NSLT01000044.1 Protein Homology CDS 17350 17546 . - 0 ID=cds-CLI76_08290;Parent=gene-CLI76_08290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955941.1;locus_tag=CLI76_08290;product=IS4 family transposase;pseudo=true;transl_table=11 NSLT01000044.1 Genbank gene 17834 17908 . + . ID=gene-CLI76_08295;Name=CLI76_08295;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_08295 NSLT01000044.1 tRNAscan-SE tRNA 17834 17908 . + . ID=rna-CLI76_08295;Parent=gene-CLI76_08295;anticodon=(pos:17869..17871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08295;product=tRNA-Val NSLT01000044.1 tRNAscan-SE exon 17834 17908 . + . ID=exon-CLI76_08295-1;Parent=rna-CLI76_08295;anticodon=(pos:17869..17871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08295;product=tRNA-Val NSLT01000044.1 Genbank gene 17951 18028 . + . ID=gene-CLI76_08300;Name=CLI76_08300;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_08300 NSLT01000044.1 tRNAscan-SE tRNA 17951 18028 . + . ID=rna-CLI76_08300;Parent=gene-CLI76_08300;anticodon=(pos:17986..17988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08300;product=tRNA-Val NSLT01000044.1 tRNAscan-SE exon 17951 18028 . + . ID=exon-CLI76_08300-1;Parent=rna-CLI76_08300;anticodon=(pos:17986..17988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08300;product=tRNA-Val NSLT01000044.1 Genbank gene 18104 18988 . + . ID=gene-CLI76_08305;Name=CLI76_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08305 NSLT01000044.1 Protein Homology CDS 18104 18988 . + 0 ID=cds-PDP76709.1;Parent=gene-CLI76_08305;Dbxref=NCBI_GP:PDP76709.1;Name=PDP76709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964739.1;locus_tag=CLI76_08305;product=hypothetical protein;protein_id=PDP76709.1;transl_table=11 NSLT01000044.1 Genbank gene 19304 19555 . - . ID=gene-CLI76_08310;Name=CLI76_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08310 NSLT01000044.1 Protein Homology CDS 19304 19555 . - 0 ID=cds-PDP76710.1;Parent=gene-CLI76_08310;Dbxref=NCBI_GP:PDP76710.1;Name=PDP76710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816722.1;locus_tag=CLI76_08310;product=hypothetical protein;protein_id=PDP76710.1;transl_table=11 ##sequence-region NSLT01000045.1 1 19244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000045.1 Genbank region 1 19244 . + . ID=NSLT01000045.1:1..19244;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000045.1 Genbank pseudogene 71 286 . + . ID=gene-CLI76_08315;Name=CLI76_08315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08315;pseudo=true NSLT01000045.1 Protein Homology CDS 71 286 . + 0 ID=cds-CLI76_08315;Parent=gene-CLI76_08315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457648.1;locus_tag=CLI76_08315;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000045.1 Genbank gene 309 815 . + . ID=gene-CLI76_08320;Name=CLI76_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08320 NSLT01000045.1 Protein Homology CDS 309 815 . + 0 ID=cds-PDP76680.1;Parent=gene-CLI76_08320;Dbxref=NCBI_GP:PDP76680.1;Name=PDP76680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457647.1;locus_tag=CLI76_08320;product=histidinol phosphate aminotransferase;protein_id=PDP76680.1;transl_table=11 NSLT01000045.1 Genbank gene 1118 2383 . + . ID=gene-CLI76_08325;Name=CLI76_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08325 NSLT01000045.1 Protein Homology CDS 1118 2383 . + 0 ID=cds-PDP76693.1;Parent=gene-CLI76_08325;Dbxref=NCBI_GP:PDP76693.1;Name=PDP76693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956267.1;locus_tag=CLI76_08325;product=UDP-N-acetyl-D-galactosamine dehydrogenase;protein_id=PDP76693.1;transl_table=11 NSLT01000045.1 Genbank gene 2717 3799 . + . ID=gene-CLI76_08330;Name=CLI76_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08330 NSLT01000045.1 Protein Homology CDS 2717 3799 . + 0 ID=cds-PDP76681.1;Parent=gene-CLI76_08330;Dbxref=NCBI_GP:PDP76681.1;Name=PDP76681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874020.1;locus_tag=CLI76_08330;product=phosphoserine transaminase;protein_id=PDP76681.1;transl_table=11 NSLT01000045.1 Genbank gene 3900 4820 . + . ID=gene-CLI76_08335;Name=CLI76_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08335 NSLT01000045.1 Protein Homology CDS 3900 4820 . + 0 ID=cds-PDP76682.1;Parent=gene-CLI76_08335;Dbxref=NCBI_GP:PDP76682.1;Name=PDP76682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457645.1;locus_tag=CLI76_08335;product=3-phosphoglycerate dehydrogenase;protein_id=PDP76682.1;transl_table=11 NSLT01000045.1 Genbank gene 4839 6086 . + . ID=gene-CLI76_08340;Name=CLI76_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08340 NSLT01000045.1 Protein Homology CDS 4839 6086 . + 0 ID=cds-PDP76683.1;Parent=gene-CLI76_08340;Dbxref=NCBI_GP:PDP76683.1;Name=PDP76683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016277481.1;locus_tag=CLI76_08340;product=DUF1015 domain-containing protein;protein_id=PDP76683.1;transl_table=11 NSLT01000045.1 Genbank gene 6252 7376 . + . ID=gene-CLI76_08345;Name=CLI76_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08345 NSLT01000045.1 Protein Homology CDS 6252 7376 . + 0 ID=cds-PDP76684.1;Parent=gene-CLI76_08345;Dbxref=NCBI_GP:PDP76684.1;Name=PDP76684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457643.1;locus_tag=CLI76_08345;product=mannonate oxidoreductase;protein_id=PDP76684.1;transl_table=11 NSLT01000045.1 Genbank gene 7400 7855 . + . ID=gene-CLI76_08350;Name=CLI76_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08350 NSLT01000045.1 Protein Homology CDS 7400 7855 . + 0 ID=cds-PDP76685.1;Parent=gene-CLI76_08350;Dbxref=NCBI_GP:PDP76685.1;Name=PDP76685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964865.1;locus_tag=CLI76_08350;product=CYTH domain-containing protein;protein_id=PDP76685.1;transl_table=11 NSLT01000045.1 Genbank gene 7918 10080 . + . ID=gene-CLI76_08355;Name=CLI76_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08355 NSLT01000045.1 Protein Homology CDS 7918 10080 . + 0 ID=cds-PDP76686.1;Parent=gene-CLI76_08355;Dbxref=NCBI_GP:PDP76686.1;Name=PDP76686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585576.1;locus_tag=CLI76_08355;product=serine protease;protein_id=PDP76686.1;transl_table=11 NSLT01000045.1 Genbank gene 10237 12225 . + . ID=gene-CLI76_08360;Name=CLI76_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08360 NSLT01000045.1 Protein Homology CDS 10237 12225 . + 0 ID=cds-PDP76687.1;Parent=gene-CLI76_08360;Dbxref=NCBI_GP:PDP76687.1;Name=PDP76687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585575.1;locus_tag=CLI76_08360;product=glucosamine-6-phosphate deaminase;protein_id=PDP76687.1;transl_table=11 NSLT01000045.1 Genbank gene 12333 12815 . - . ID=gene-CLI76_08365;Name=CLI76_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08365 NSLT01000045.1 Protein Homology CDS 12333 12815 . - 0 ID=cds-PDP76688.1;Parent=gene-CLI76_08365;Dbxref=NCBI_GP:PDP76688.1;Name=PDP76688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585574.1;locus_tag=CLI76_08365;product=ferritin;protein_id=PDP76688.1;transl_table=11 NSLT01000045.1 Genbank gene 13362 14459 . + . ID=gene-CLI76_08370;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CLI76_08370 NSLT01000045.1 Protein Homology CDS 13362 14459 . + 0 ID=cds-PDP76689.1;Parent=gene-CLI76_08370;Dbxref=NCBI_GP:PDP76689.1;Name=PDP76689.1;gbkey=CDS;gene=gmd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458009.1;locus_tag=CLI76_08370;product=GDP-mannose 4%2C6-dehydratase;protein_id=PDP76689.1;transl_table=11 NSLT01000045.1 Genbank gene 14452 15525 . + . ID=gene-CLI76_08375;Name=CLI76_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08375 NSLT01000045.1 Protein Homology CDS 14452 15525 . + 0 ID=cds-PDP76690.1;Parent=gene-CLI76_08375;Dbxref=NCBI_GP:PDP76690.1;Name=PDP76690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964872.1;locus_tag=CLI76_08375;product=GDP-fucose synthetase;protein_id=PDP76690.1;transl_table=11 NSLT01000045.1 Genbank gene 15664 16683 . + . ID=gene-CLI76_08380;Name=CLI76_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08380 NSLT01000045.1 Protein Homology CDS 15664 16683 . + 0 ID=cds-PDP76691.1;Parent=gene-CLI76_08380;Dbxref=NCBI_GP:PDP76691.1;Name=PDP76691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458011.1;locus_tag=CLI76_08380;product=branched-chain amino acid aminotransferase;protein_id=PDP76691.1;transl_table=11 NSLT01000045.1 Genbank gene 16812 18533 . - . ID=gene-CLI76_08385;Name=CLI76_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08385 NSLT01000045.1 Protein Homology CDS 16812 18533 . - 0 ID=cds-PDP76692.1;Parent=gene-CLI76_08385;Dbxref=NCBI_GP:PDP76692.1;Name=PDP76692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458012.1;locus_tag=CLI76_08385;product=phospholipase;protein_id=PDP76692.1;transl_table=11 NSLT01000045.1 Genbank gene 18611 18793 . + . ID=gene-CLI76_08390;Name=CLI76_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08390 NSLT01000045.1 Protein Homology CDS 18611 18793 . + 0 ID=cds-PDP76694.1;Parent=gene-CLI76_08390;Dbxref=NCBI_GP:PDP76694.1;Name=PDP76694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815535.1;locus_tag=CLI76_08390;product=hypothetical protein;protein_id=PDP76694.1;transl_table=11 ##sequence-region NSLT01000046.1 1 18983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000046.1 Genbank region 1 18983 . + . ID=NSLT01000046.1:1..18983;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000046.1 Genbank gene 1 848 . - . ID=gene-CLI76_08395;Name=CLI76_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08395;partial=true;start_range=.,1 NSLT01000046.1 Protein Homology CDS 1 848 . - 0 ID=cds-PDP76677.1;Parent=gene-CLI76_08395;Dbxref=NCBI_GP:PDP76677.1;Name=PDP76677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_08395;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76677.1;start_range=.,1;transl_table=11 NSLT01000046.1 Genbank gene 1050 2390 . - . ID=gene-CLI76_08400;Name=CLI76_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08400 NSLT01000046.1 Protein Homology CDS 1050 2390 . - 0 ID=cds-PDP76665.1;Parent=gene-CLI76_08400;Dbxref=NCBI_GP:PDP76665.1;Name=PDP76665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874101.1;locus_tag=CLI76_08400;product=secretion protein;protein_id=PDP76665.1;transl_table=11 NSLT01000046.1 Genbank gene 2774 4471 . - . ID=gene-CLI76_08405;Name=CLI76_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08405 NSLT01000046.1 Protein Homology CDS 2774 4471 . - 0 ID=cds-PDP76666.1;Parent=gene-CLI76_08405;Dbxref=NCBI_GP:PDP76666.1;Name=PDP76666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815778.1;locus_tag=CLI76_08405;product=hypothetical protein;protein_id=PDP76666.1;transl_table=11 NSLT01000046.1 Genbank gene 4882 5556 . - . ID=gene-CLI76_08410;Name=CLI76_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08410 NSLT01000046.1 Protein Homology CDS 4882 5556 . - 0 ID=cds-PDP76667.1;Parent=gene-CLI76_08410;Dbxref=NCBI_GP:PDP76667.1;Name=PDP76667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584264.1;locus_tag=CLI76_08410;product=DUF4276 domain-containing protein;protein_id=PDP76667.1;transl_table=11 NSLT01000046.1 Genbank gene 5561 6649 . - . ID=gene-CLI76_08415;Name=CLI76_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08415 NSLT01000046.1 Protein Homology CDS 5561 6649 . - 0 ID=cds-PDP76678.1;Parent=gene-CLI76_08415;Dbxref=NCBI_GP:PDP76678.1;Name=PDP76678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584263.1;locus_tag=CLI76_08415;product=ATPase;protein_id=PDP76678.1;transl_table=11 NSLT01000046.1 Genbank gene 6840 7064 . + . ID=gene-CLI76_08420;Name=CLI76_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08420 NSLT01000046.1 Protein Homology CDS 6840 7064 . + 0 ID=cds-PDP76668.1;Parent=gene-CLI76_08420;Dbxref=NCBI_GP:PDP76668.1;Name=PDP76668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965474.1;locus_tag=CLI76_08420;product=hypothetical protein;protein_id=PDP76668.1;transl_table=11 NSLT01000046.1 Genbank gene 7146 8123 . + . ID=gene-CLI76_08425;Name=CLI76_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08425 NSLT01000046.1 Protein Homology CDS 7146 8123 . + 0 ID=cds-PDP76669.1;Parent=gene-CLI76_08425;Dbxref=NCBI_GP:PDP76669.1;Name=PDP76669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458192.1;locus_tag=CLI76_08425;product=aminodeoxychorismate synthase component I;protein_id=PDP76669.1;transl_table=11 NSLT01000046.1 Genbank gene 8130 8729 . + . ID=gene-CLI76_08430;Name=CLI76_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08430 NSLT01000046.1 Protein Homology CDS 8130 8729 . + 0 ID=cds-PDP76670.1;Parent=gene-CLI76_08430;Dbxref=NCBI_GP:PDP76670.1;Name=PDP76670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815769.1;locus_tag=CLI76_08430;product=hypothetical protein;protein_id=PDP76670.1;transl_table=11 NSLT01000046.1 Genbank gene 8772 10415 . - . ID=gene-CLI76_08435;Name=CLI76_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08435 NSLT01000046.1 Protein Homology CDS 8772 10415 . - 0 ID=cds-PDP76671.1;Parent=gene-CLI76_08435;Dbxref=NCBI_GP:PDP76671.1;Name=PDP76671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815768.1;locus_tag=CLI76_08435;product=hypothetical protein;protein_id=PDP76671.1;transl_table=11 NSLT01000046.1 Genbank gene 10412 13222 . - . ID=gene-CLI76_08440;Name=CLI76_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08440 NSLT01000046.1 Protein Homology CDS 10412 13222 . - 0 ID=cds-PDP76679.1;Parent=gene-CLI76_08440;Dbxref=NCBI_GP:PDP76679.1;Name=PDP76679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815767.1;locus_tag=CLI76_08440;product=TonB-dependent receptor;protein_id=PDP76679.1;transl_table=11 NSLT01000046.1 Genbank gene 13390 14571 . - . ID=gene-CLI76_08445;Name=CLI76_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08445 NSLT01000046.1 Protein Homology CDS 13390 14571 . - 0 ID=cds-PDP76672.1;Parent=gene-CLI76_08445;Dbxref=NCBI_GP:PDP76672.1;Name=PDP76672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584257.1;locus_tag=CLI76_08445;product=DUF4876 domain-containing protein;protein_id=PDP76672.1;transl_table=11 NSLT01000046.1 Genbank gene 14584 14847 . - . ID=gene-CLI76_08450;Name=CLI76_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08450 NSLT01000046.1 Protein Homology CDS 14584 14847 . - 0 ID=cds-PDP76673.1;Parent=gene-CLI76_08450;Dbxref=NCBI_GP:PDP76673.1;Name=PDP76673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458197.1;locus_tag=CLI76_08450;product=hypothetical protein;protein_id=PDP76673.1;transl_table=11 NSLT01000046.1 Genbank gene 14909 15139 . - . ID=gene-CLI76_08455;Name=CLI76_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08455 NSLT01000046.1 Protein Homology CDS 14909 15139 . - 0 ID=cds-PDP76674.1;Parent=gene-CLI76_08455;Dbxref=NCBI_GP:PDP76674.1;Name=PDP76674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815765.1;locus_tag=CLI76_08455;product=hypothetical protein;protein_id=PDP76674.1;transl_table=11 NSLT01000046.1 Genbank gene 15169 17895 . - . ID=gene-CLI76_08460;Name=CLI76_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08460 NSLT01000046.1 Protein Homology CDS 15169 17895 . - 0 ID=cds-PDP76675.1;Parent=gene-CLI76_08460;Dbxref=NCBI_GP:PDP76675.1;Name=PDP76675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965505.1;locus_tag=CLI76_08460;product=pyruvate%2C phosphate dikinase;protein_id=PDP76675.1;transl_table=11 NSLT01000046.1 Genbank gene 18261 18983 . - . ID=gene-CLI76_08465;Name=CLI76_08465;end_range=18983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08465;partial=true NSLT01000046.1 Protein Homology CDS 18261 18983 . - 0 ID=cds-PDP76676.1;Parent=gene-CLI76_08465;Dbxref=NCBI_GP:PDP76676.1;Name=PDP76676.1;end_range=18983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874111.1;locus_tag=CLI76_08465;partial=true;product=SIR2 family protein;protein_id=PDP76676.1;transl_table=11 ##sequence-region NSLT01000047.1 1 18827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000047.1 Genbank region 1 18827 . + . ID=NSLT01000047.1:1..18827;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000047.1 Genbank gene 279 1523 . - . ID=gene-CLI76_08470;Name=CLI76_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08470 NSLT01000047.1 Protein Homology CDS 279 1523 . - 0 ID=cds-PDP76648.1;Parent=gene-CLI76_08470;Dbxref=NCBI_GP:PDP76648.1;Name=PDP76648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585308.1;locus_tag=CLI76_08470;product=hypothetical protein;protein_id=PDP76648.1;transl_table=11 NSLT01000047.1 Genbank gene 1792 1869 . + . ID=gene-CLI76_08475;Name=CLI76_08475;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_08475 NSLT01000047.1 tRNAscan-SE tRNA 1792 1869 . + . ID=rna-CLI76_08475;Parent=gene-CLI76_08475;anticodon=(pos:1827..1829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08475;product=tRNA-Pro NSLT01000047.1 tRNAscan-SE exon 1792 1869 . + . ID=exon-CLI76_08475-1;Parent=rna-CLI76_08475;anticodon=(pos:1827..1829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08475;product=tRNA-Pro NSLT01000047.1 Genbank gene 2014 3735 . - . ID=gene-CLI76_08480;Name=CLI76_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08480 NSLT01000047.1 Protein Homology CDS 2014 3735 . - 0 ID=cds-PDP76649.1;Parent=gene-CLI76_08480;Dbxref=NCBI_GP:PDP76649.1;Name=PDP76649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965604.1;locus_tag=CLI76_08480;product=acyl-CoA dehydrogenase;protein_id=PDP76649.1;transl_table=11 NSLT01000047.1 Genbank gene 3747 4766 . - . ID=gene-CLI76_08485;Name=CLI76_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08485 NSLT01000047.1 Protein Homology CDS 3747 4766 . - 0 ID=cds-PDP76650.1;Parent=gene-CLI76_08485;Dbxref=NCBI_GP:PDP76650.1;Name=PDP76650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_100651.1;locus_tag=CLI76_08485;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=PDP76650.1;transl_table=11 NSLT01000047.1 Genbank gene 4775 5641 . - . ID=gene-CLI76_08490;Name=CLI76_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08490 NSLT01000047.1 Protein Homology CDS 4775 5641 . - 0 ID=cds-PDP76651.1;Parent=gene-CLI76_08490;Dbxref=NCBI_GP:PDP76651.1;Name=PDP76651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965602.1;locus_tag=CLI76_08490;product=electron transfer flavoprotein subunit beta;protein_id=PDP76651.1;transl_table=11 NSLT01000047.1 Genbank gene 5732 6451 . - . ID=gene-CLI76_08495;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CLI76_08495 NSLT01000047.1 Protein Homology CDS 5732 6451 . - 0 ID=cds-PDP76652.1;Parent=gene-CLI76_08495;Dbxref=NCBI_GP:PDP76652.1;Name=PDP76652.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457790.1;locus_tag=CLI76_08495;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=PDP76652.1;transl_table=11 NSLT01000047.1 Genbank gene 6682 7155 . - . ID=gene-CLI76_08500;Name=CLI76_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08500 NSLT01000047.1 Protein Homology CDS 6682 7155 . - 0 ID=cds-PDP76653.1;Parent=gene-CLI76_08500;Dbxref=NCBI_GP:PDP76653.1;Name=PDP76653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585314.1;locus_tag=CLI76_08500;product=biopolymer transporter ExbD;protein_id=PDP76653.1;transl_table=11 NSLT01000047.1 Genbank gene 7171 7785 . - . ID=gene-CLI76_08505;Name=CLI76_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08505 NSLT01000047.1 Protein Homology CDS 7171 7785 . - 0 ID=cds-PDP76654.1;Parent=gene-CLI76_08505;Dbxref=NCBI_GP:PDP76654.1;Name=PDP76654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585315.1;locus_tag=CLI76_08505;product=biopolymer transporter ExbD;protein_id=PDP76654.1;transl_table=11 NSLT01000047.1 Genbank gene 7821 8291 . - . ID=gene-CLI76_08510;Name=CLI76_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08510 NSLT01000047.1 Protein Homology CDS 7821 8291 . - 0 ID=cds-PDP76655.1;Parent=gene-CLI76_08510;Dbxref=NCBI_GP:PDP76655.1;Name=PDP76655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965598.1;locus_tag=CLI76_08510;product=hypothetical protein;protein_id=PDP76655.1;transl_table=11 NSLT01000047.1 Genbank gene 8300 9112 . - . ID=gene-CLI76_08515;Name=CLI76_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08515 NSLT01000047.1 Protein Homology CDS 8300 9112 . - 0 ID=cds-PDP76656.1;Parent=gene-CLI76_08515;Dbxref=NCBI_GP:PDP76656.1;Name=PDP76656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585317.1;locus_tag=CLI76_08515;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP76656.1;transl_table=11 NSLT01000047.1 Genbank gene 9180 9267 . - . ID=gene-CLI76_08520;Name=CLI76_08520;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_08520 NSLT01000047.1 tRNAscan-SE tRNA 9180 9267 . - . ID=rna-CLI76_08520;Parent=gene-CLI76_08520;anticodon=(pos:complement(9231..9233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08520;product=tRNA-Ser NSLT01000047.1 tRNAscan-SE exon 9180 9267 . - . ID=exon-CLI76_08520-1;Parent=rna-CLI76_08520;anticodon=(pos:complement(9231..9233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08520;product=tRNA-Ser NSLT01000047.1 Genbank gene 9460 10263 . - . ID=gene-CLI76_08525;Name=CLI76_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08525 NSLT01000047.1 Protein Homology CDS 9460 10263 . - 0 ID=cds-PDP76657.1;Parent=gene-CLI76_08525;Dbxref=NCBI_GP:PDP76657.1;Name=PDP76657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585318.1;locus_tag=CLI76_08525;product=TatD family deoxyribonuclease;protein_id=PDP76657.1;transl_table=11 NSLT01000047.1 Genbank gene 10334 11311 . - . ID=gene-CLI76_08530;Name=CLI76_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08530 NSLT01000047.1 Protein Homology CDS 10334 11311 . - 0 ID=cds-PDP76658.1;Parent=gene-CLI76_08530;Dbxref=NCBI_GP:PDP76658.1;Name=PDP76658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585319.1;locus_tag=CLI76_08530;product=polyprenyl synthetase family protein;protein_id=PDP76658.1;transl_table=11 NSLT01000047.1 Genbank gene 11482 12174 . - . ID=gene-CLI76_08535;Name=CLI76_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08535 NSLT01000047.1 Protein Homology CDS 11482 12174 . - 0 ID=cds-PDP76659.1;Parent=gene-CLI76_08535;Dbxref=NCBI_GP:PDP76659.1;Name=PDP76659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457793.1;locus_tag=CLI76_08535;product=energy transducer TonB;protein_id=PDP76659.1;transl_table=11 NSLT01000047.1 Genbank pseudogene 12307 12550 . + . ID=gene-CLI76_08540;Name=CLI76_08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08540;pseudo=true NSLT01000047.1 Protein Homology CDS 12307 12550 . + 0 ID=cds-CLI76_08540;Parent=gene-CLI76_08540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873930.1;locus_tag=CLI76_08540;product=T9SS C-terminal target domain-containing protein;pseudo=true;transl_table=11 NSLT01000047.1 Genbank gene 12626 15244 . - . ID=gene-CLI76_08545;Name=CLI76_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08545 NSLT01000047.1 Protein Homology CDS 12626 15244 . - 0 ID=cds-PDP76660.1;Parent=gene-CLI76_08545;Dbxref=NCBI_GP:PDP76660.1;Name=PDP76660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585322.1;locus_tag=CLI76_08545;product=hypothetical protein;protein_id=PDP76660.1;transl_table=11 NSLT01000047.1 Genbank gene 15285 16001 . - . ID=gene-CLI76_08550;Name=CLI76_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08550 NSLT01000047.1 Protein Homology CDS 15285 16001 . - 0 ID=cds-PDP76661.1;Parent=gene-CLI76_08550;Dbxref=NCBI_GP:PDP76661.1;Name=PDP76661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585323.1;locus_tag=CLI76_08550;product=hypothetical protein;protein_id=PDP76661.1;transl_table=11 NSLT01000047.1 Genbank gene 15982 17166 . - . ID=gene-CLI76_08555;Name=CLI76_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08555 NSLT01000047.1 Protein Homology CDS 15982 17166 . - 0 ID=cds-PDP76662.1;Parent=gene-CLI76_08555;Dbxref=NCBI_GP:PDP76662.1;Name=PDP76662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964401.1;locus_tag=CLI76_08555;product=GTPase ObgE;protein_id=PDP76662.1;transl_table=11 NSLT01000047.1 Genbank gene 17176 17760 . - . ID=gene-CLI76_08560;Name=CLI76_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08560 NSLT01000047.1 Protein Homology CDS 17176 17760 . - 0 ID=cds-PDP76663.1;Parent=gene-CLI76_08560;Dbxref=NCBI_GP:PDP76663.1;Name=PDP76663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816474.1;locus_tag=CLI76_08560;product=adenylate kinase;protein_id=PDP76663.1;transl_table=11 NSLT01000047.1 Genbank gene 17761 18297 . - . ID=gene-CLI76_08565;Name=CLI76_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08565 NSLT01000047.1 Protein Homology CDS 17761 18297 . - 0 ID=cds-PDP76664.1;Parent=gene-CLI76_08565;Dbxref=NCBI_GP:PDP76664.1;Name=PDP76664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964399.1;locus_tag=CLI76_08565;product=hypoxanthine phosphoribosyltransferase;protein_id=PDP76664.1;transl_table=11 ##sequence-region NSLT01000048.1 1 18588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000048.1 Genbank region 1 18588 . + . ID=NSLT01000048.1:1..18588;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000048.1 Genbank gene 493 1350 . - . ID=gene-CLI76_08570;Name=CLI76_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08570 NSLT01000048.1 Protein Homology CDS 493 1350 . - 0 ID=cds-PDP76636.1;Parent=gene-CLI76_08570;Dbxref=NCBI_GP:PDP76636.1;Name=PDP76636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584946.1;locus_tag=CLI76_08570;product=DUF2807 domain-containing protein;protein_id=PDP76636.1;transl_table=11 NSLT01000048.1 Genbank pseudogene 1353 1544 . + . ID=gene-CLI76_08575;Name=CLI76_08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08575;pseudo=true NSLT01000048.1 Protein Homology CDS 1353 1544 . + 0 ID=cds-CLI76_08575;Parent=gene-CLI76_08575;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458364.1;locus_tag=CLI76_08575;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000048.1 Genbank pseudogene 1587 1959 . - . ID=gene-CLI76_08580;Name=CLI76_08580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08580;pseudo=true NSLT01000048.1 Protein Homology CDS 1587 1959 . - 0 ID=cds-CLI76_08580;Parent=gene-CLI76_08580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873800.1;locus_tag=CLI76_08580;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000048.1 Genbank gene 1856 2200 . + . ID=gene-CLI76_08585;Name=CLI76_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08585 NSLT01000048.1 Protein Homology CDS 1856 2200 . + 0 ID=cds-PDP76637.1;Parent=gene-CLI76_08585;Dbxref=NCBI_GP:PDP76637.1;Name=PDP76637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584948.1;locus_tag=CLI76_08585;product=hypothetical protein;protein_id=PDP76637.1;transl_table=11 NSLT01000048.1 Genbank gene 2181 2840 . + . ID=gene-CLI76_08590;Name=CLI76_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08590 NSLT01000048.1 Protein Homology CDS 2181 2840 . + 0 ID=cds-PDP76638.1;Parent=gene-CLI76_08590;Dbxref=NCBI_GP:PDP76638.1;Name=PDP76638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584949.1;locus_tag=CLI76_08590;product=hypothetical protein;protein_id=PDP76638.1;transl_table=11 NSLT01000048.1 Genbank gene 2877 3716 . - . ID=gene-CLI76_08595;Name=CLI76_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08595 NSLT01000048.1 Protein Homology CDS 2877 3716 . - 0 ID=cds-PDP76639.1;Parent=gene-CLI76_08595;Dbxref=NCBI_GP:PDP76639.1;Name=PDP76639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584950.1;locus_tag=CLI76_08595;product=XynC protein;protein_id=PDP76639.1;transl_table=11 NSLT01000048.1 Genbank gene 4049 7216 . - . ID=gene-CLI76_08600;Name=CLI76_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08600 NSLT01000048.1 Protein Homology CDS 4049 7216 . - 0 ID=cds-PDP76640.1;Parent=gene-CLI76_08600;Dbxref=NCBI_GP:PDP76640.1;Name=PDP76640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584952.1;locus_tag=CLI76_08600;product=ABC transporter permease;protein_id=PDP76640.1;transl_table=11 NSLT01000048.1 Genbank gene 7256 8629 . - . ID=gene-CLI76_08605;Name=CLI76_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08605 NSLT01000048.1 Protein Homology CDS 7256 8629 . - 0 ID=cds-PDP76647.1;Parent=gene-CLI76_08605;Dbxref=NCBI_GP:PDP76647.1;Name=PDP76647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816205.1;locus_tag=CLI76_08605;product=TolC family protein;protein_id=PDP76647.1;transl_table=11 NSLT01000048.1 Genbank gene 8724 11795 . - . ID=gene-CLI76_08610;Name=CLI76_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08610 NSLT01000048.1 Protein Homology CDS 8724 11795 . - 0 ID=cds-PDP76641.1;Parent=gene-CLI76_08610;Dbxref=NCBI_GP:PDP76641.1;Name=PDP76641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458356.1;locus_tag=CLI76_08610;product=AcrB/AcrD/AcrF family protein;protein_id=PDP76641.1;transl_table=11 NSLT01000048.1 Genbank gene 11830 12930 . - . ID=gene-CLI76_08615;Name=CLI76_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08615 NSLT01000048.1 Protein Homology CDS 11830 12930 . - 0 ID=cds-PDP76642.1;Parent=gene-CLI76_08615;Dbxref=NCBI_GP:PDP76642.1;Name=PDP76642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584955.1;locus_tag=CLI76_08615;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PDP76642.1;transl_table=11 NSLT01000048.1 Genbank gene 12949 13989 . - . ID=gene-CLI76_08620;Name=CLI76_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08620 NSLT01000048.1 Protein Homology CDS 12949 13989 . - 0 ID=cds-PDP76643.1;Parent=gene-CLI76_08620;Dbxref=NCBI_GP:PDP76643.1;Name=PDP76643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458354.1;locus_tag=CLI76_08620;product=hypothetical protein;protein_id=PDP76643.1;transl_table=11 NSLT01000048.1 Genbank gene 14143 15195 . - . ID=gene-CLI76_08625;Name=CLI76_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08625 NSLT01000048.1 Protein Homology CDS 14143 15195 . - 0 ID=cds-PDP76644.1;Parent=gene-CLI76_08625;Dbxref=NCBI_GP:PDP76644.1;Name=PDP76644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458353.1;locus_tag=CLI76_08625;product=hypothetical protein;protein_id=PDP76644.1;transl_table=11 NSLT01000048.1 Genbank gene 15288 16355 . - . ID=gene-CLI76_08630;Name=CLI76_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08630 NSLT01000048.1 Protein Homology CDS 15288 16355 . - 0 ID=cds-PDP76645.1;Parent=gene-CLI76_08630;Dbxref=NCBI_GP:PDP76645.1;Name=PDP76645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584958.1;locus_tag=CLI76_08630;product=hypothetical protein;protein_id=PDP76645.1;transl_table=11 NSLT01000048.1 Genbank gene 16657 17385 . + . ID=gene-CLI76_08635;Name=CLI76_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08635 NSLT01000048.1 Protein Homology CDS 16657 17385 . + 0 ID=cds-PDP76646.1;Parent=gene-CLI76_08635;Dbxref=NCBI_GP:PDP76646.1;Name=PDP76646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584959.1;locus_tag=CLI76_08635;product=carbonic anhydrase;protein_id=PDP76646.1;transl_table=11 NSLT01000048.1 Genbank pseudogene 17565 17693 . - . ID=gene-CLI76_08640;Name=CLI76_08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08640;pseudo=true NSLT01000048.1 Protein Homology CDS 17565 17693 . - 0 ID=cds-CLI76_08640;Parent=gene-CLI76_08640;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583940.1;locus_tag=CLI76_08640;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000048.1 Genbank pseudogene 17799 18588 . - . ID=gene-CLI76_08645;Name=CLI76_08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08645;pseudo=true NSLT01000048.1 Protein Homology CDS 17799 18588 . - 1 ID=cds-CLI76_08645;Parent=gene-CLI76_08645;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_08645;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000049.1 1 16839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000049.1 Genbank region 1 16839 . + . ID=NSLT01000049.1:1..16839;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000049.1 Genbank gene 1 114 . + . ID=gene-CLI76_08650;Name=CLI76_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08650;partial=true;start_range=.,1 NSLT01000049.1 Protein Homology CDS 1 114 . + 0 ID=cds-PDP76619.1;Parent=gene-CLI76_08650;Dbxref=NCBI_GP:PDP76619.1;Name=PDP76619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_08650;partial=true;product=ISAs1 family transposase;protein_id=PDP76619.1;start_range=.,1;transl_table=11 NSLT01000049.1 Genbank gene 209 688 . - . ID=gene-CLI76_08655;Name=CLI76_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08655 NSLT01000049.1 Protein Homology CDS 209 688 . - 0 ID=cds-PDP76632.1;Parent=gene-CLI76_08655;Dbxref=NCBI_GP:PDP76632.1;Name=PDP76632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458299.1;locus_tag=CLI76_08655;product=S-ribosylhomocysteine lyase;protein_id=PDP76632.1;transl_table=11 NSLT01000049.1 Genbank gene 713 1399 . - . ID=gene-CLI76_08660;Name=CLI76_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08660 NSLT01000049.1 Protein Homology CDS 713 1399 . - 0 ID=cds-PDP76620.1;Parent=gene-CLI76_08660;Dbxref=NCBI_GP:PDP76620.1;Name=PDP76620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873902.1;locus_tag=CLI76_08660;product=5'-methylthioadenosine nucleosidase;protein_id=PDP76620.1;transl_table=11 NSLT01000049.1 Genbank gene 1800 3209 . - . ID=gene-CLI76_08665;Name=CLI76_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08665 NSLT01000049.1 Protein Homology CDS 1800 3209 . - 0 ID=cds-PDP76621.1;Parent=gene-CLI76_08665;Dbxref=NCBI_GP:PDP76621.1;Name=PDP76621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585025.1;locus_tag=CLI76_08665;product=T9SS C-terminal target domain-containing protein;protein_id=PDP76621.1;transl_table=11 NSLT01000049.1 Genbank gene 3370 3612 . + . ID=gene-CLI76_08670;Name=CLI76_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08670 NSLT01000049.1 Protein Homology CDS 3370 3612 . + 0 ID=cds-PDP76622.1;Parent=gene-CLI76_08670;Dbxref=NCBI_GP:PDP76622.1;Name=PDP76622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873904.1;locus_tag=CLI76_08670;product=hypothetical protein;protein_id=PDP76622.1;transl_table=11 NSLT01000049.1 Genbank pseudogene 3691 3885 . + . ID=gene-CLI76_08675;Name=CLI76_08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08675;pseudo=true NSLT01000049.1 Protein Homology CDS 3691 3885 . + 0 ID=cds-CLI76_08675;Parent=gene-CLI76_08675;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI76_08675;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000049.1 Genbank pseudogene 4015 4275 . + . ID=gene-CLI76_08680;Name=CLI76_08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08680;pseudo=true NSLT01000049.1 Protein Homology CDS 4015 4275 . + 0 ID=cds-CLI76_08680;Parent=gene-CLI76_08680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874117.1;locus_tag=CLI76_08680;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000049.1 Genbank gene 4311 6443 . - . ID=gene-CLI76_08685;Name=CLI76_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08685 NSLT01000049.1 Protein Homology CDS 4311 6443 . - 0 ID=cds-PDP76633.1;Parent=gene-CLI76_08685;Dbxref=NCBI_GP:PDP76633.1;Name=PDP76633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874121.1;locus_tag=CLI76_08685;product=peptidase S10;protein_id=PDP76633.1;transl_table=11 NSLT01000049.1 Genbank gene 6465 7883 . - . ID=gene-CLI76_08690;Name=CLI76_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08690 NSLT01000049.1 Protein Homology CDS 6465 7883 . - 0 ID=cds-PDP76623.1;Parent=gene-CLI76_08690;Dbxref=NCBI_GP:PDP76623.1;Name=PDP76623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585020.1;locus_tag=CLI76_08690;product=TIGR00341 family protein;protein_id=PDP76623.1;transl_table=11 NSLT01000049.1 Genbank gene 7905 9386 . - . ID=gene-CLI76_08695;Name=CLI76_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08695 NSLT01000049.1 Protein Homology CDS 7905 9386 . - 0 ID=cds-PDP76634.1;Parent=gene-CLI76_08695;Dbxref=NCBI_GP:PDP76634.1;Name=PDP76634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816258.1;locus_tag=CLI76_08695;product=polysaccharide biosynthesis protein;protein_id=PDP76634.1;transl_table=11 NSLT01000049.1 Genbank gene 9433 10464 . - . ID=gene-CLI76_08700;Name=CLI76_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08700 NSLT01000049.1 Protein Homology CDS 9433 10464 . - 0 ID=cds-PDP76624.1;Parent=gene-CLI76_08700;Dbxref=NCBI_GP:PDP76624.1;Name=PDP76624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956038.1;locus_tag=CLI76_08700;product=Holliday junction branch migration DNA helicase RuvB;protein_id=PDP76624.1;transl_table=11 NSLT01000049.1 Genbank gene 11436 11870 . + . ID=gene-CLI76_08705;Name=CLI76_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08705 NSLT01000049.1 Protein Homology CDS 11436 11870 . + 0 ID=cds-PDP76635.1;Parent=gene-CLI76_08705;Dbxref=NCBI_GP:PDP76635.1;Name=PDP76635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585015.1;locus_tag=CLI76_08705;product=cysteine methyltransferase;protein_id=PDP76635.1;transl_table=11 NSLT01000049.1 Genbank gene 11953 12291 . + . ID=gene-CLI76_08710;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CLI76_08710 NSLT01000049.1 Protein Homology CDS 11953 12291 . + 0 ID=cds-PDP76625.1;Parent=gene-CLI76_08710;Dbxref=NCBI_GP:PDP76625.1;Name=PDP76625.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585014.1;locus_tag=CLI76_08710;product=preprotein translocase subunit YajC;protein_id=PDP76625.1;transl_table=11 NSLT01000049.1 Genbank gene 12419 13426 . + . ID=gene-CLI76_08715;Name=CLI76_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08715 NSLT01000049.1 Protein Homology CDS 12419 13426 . + 0 ID=cds-PDP76626.1;Parent=gene-CLI76_08715;Dbxref=NCBI_GP:PDP76626.1;Name=PDP76626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458309.1;locus_tag=CLI76_08715;product=hypothetical protein;protein_id=PDP76626.1;transl_table=11 NSLT01000049.1 Genbank gene 13433 14041 . + . ID=gene-CLI76_08720;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CLI76_08720 NSLT01000049.1 Protein Homology CDS 13433 14041 . + 0 ID=cds-PDP76627.1;Parent=gene-CLI76_08720;Dbxref=NCBI_GP:PDP76627.1;Name=PDP76627.1;gbkey=CDS;gene=coaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585012.1;locus_tag=CLI76_08720;product=dephospho-CoA kinase;protein_id=PDP76627.1;transl_table=11 NSLT01000049.1 Genbank gene 14148 14579 . + . ID=gene-CLI76_08725;Name=CLI76_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08725 NSLT01000049.1 Protein Homology CDS 14148 14579 . + 0 ID=cds-PDP76628.1;Parent=gene-CLI76_08725;Dbxref=NCBI_GP:PDP76628.1;Name=PDP76628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816254.1;locus_tag=CLI76_08725;product=hypothetical protein;protein_id=PDP76628.1;transl_table=11 NSLT01000049.1 Genbank gene 14655 15845 . + . ID=gene-CLI76_08730;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CLI76_08730 NSLT01000049.1 Protein Homology CDS 14655 15845 . + 0 ID=cds-PDP76629.1;Parent=gene-CLI76_08730;Dbxref=NCBI_GP:PDP76629.1;Name=PDP76629.1;gbkey=CDS;gene=kbl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018710485.1;locus_tag=CLI76_08730;product=glycine C-acetyltransferase;protein_id=PDP76629.1;transl_table=11 NSLT01000049.1 Genbank gene 15953 16666 . + . ID=gene-CLI76_08735;Name=CLI76_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08735 NSLT01000049.1 Protein Homology CDS 15953 16666 . + 0 ID=cds-PDP76630.1;Parent=gene-CLI76_08735;Dbxref=NCBI_GP:PDP76630.1;Name=PDP76630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585009.1;locus_tag=CLI76_08735;product=precorrin-2 C(20)-methyltransferase;protein_id=PDP76630.1;transl_table=11 NSLT01000049.1 Genbank gene 16726 16839 . - . ID=gene-CLI76_08740;Name=CLI76_08740;end_range=16839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08740;partial=true NSLT01000049.1 Protein Homology CDS 16726 16839 . - 0 ID=cds-PDP76631.1;Parent=gene-CLI76_08740;Dbxref=NCBI_GP:PDP76631.1;Name=PDP76631.1;end_range=16839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_08740;partial=true;product=ISAs1 family transposase;protein_id=PDP76631.1;transl_table=11 ##sequence-region NSLT01000004.1 1 80333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000004.1 Genbank region 1 80333 . + . ID=NSLT01000004.1:1..80333;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000004.1 Genbank gene 505 1137 . - . ID=gene-CLI76_01230;Name=CLI76_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01230 NSLT01000004.1 Protein Homology CDS 505 1137 . - 0 ID=cds-PDP77923.1;Parent=gene-CLI76_01230;Dbxref=NCBI_GP:PDP77923.1;Name=PDP77923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585126.1;locus_tag=CLI76_01230;product=hypothetical protein;protein_id=PDP77923.1;transl_table=11 NSLT01000004.1 Genbank gene 1189 2010 . - . ID=gene-CLI76_01235;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CLI76_01235 NSLT01000004.1 Protein Homology CDS 1189 2010 . - 0 ID=cds-PDP77924.1;Parent=gene-CLI76_01235;Dbxref=NCBI_GP:PDP77924.1;Name=PDP77924.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005820112.1;locus_tag=CLI76_01235;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=PDP77924.1;transl_table=11 NSLT01000004.1 Genbank gene 2081 3601 . - . ID=gene-CLI76_01240;Name=CLI76_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01240 NSLT01000004.1 Protein Homology CDS 2081 3601 . - 0 ID=cds-PDP77925.1;Parent=gene-CLI76_01240;Dbxref=NCBI_GP:PDP77925.1;Name=PDP77925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009433080.1;locus_tag=CLI76_01240;product=GMP synthase (glutamine-hydrolyzing);protein_id=PDP77925.1;transl_table=11 NSLT01000004.1 Genbank gene 4318 4575 . + . ID=gene-CLI76_01245;Name=CLI76_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01245 NSLT01000004.1 Protein Homology CDS 4318 4575 . + 0 ID=cds-PDP77926.1;Parent=gene-CLI76_01245;Dbxref=NCBI_GP:PDP77926.1;Name=PDP77926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585129.1;locus_tag=CLI76_01245;product=50S ribosomal protein L31 type B;protein_id=PDP77926.1;transl_table=11 NSLT01000004.1 Genbank gene 4792 6288 . + . ID=gene-CLI76_01250;Name=CLI76_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01250 NSLT01000004.1 Protein Homology CDS 4792 6288 . + 0 ID=cds-PDP77927.1;Parent=gene-CLI76_01250;Dbxref=NCBI_GP:PDP77927.1;Name=PDP77927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585130.1;locus_tag=CLI76_01250;product=deoxyribonuclease HsdR;protein_id=PDP77927.1;transl_table=11 NSLT01000004.1 Genbank gene 6478 7341 . + . ID=gene-CLI76_01255;Name=CLI76_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01255 NSLT01000004.1 Protein Homology CDS 6478 7341 . + 0 ID=cds-PDP77928.1;Parent=gene-CLI76_01255;Dbxref=NCBI_GP:PDP77928.1;Name=PDP77928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008625412.1;locus_tag=CLI76_01255;product=RNA polymerase subunit sigma;protein_id=PDP77928.1;transl_table=11 NSLT01000004.1 Genbank gene 7438 7791 . + . ID=gene-CLI76_01260;Name=CLI76_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01260 NSLT01000004.1 Protein Homology CDS 7438 7791 . + 0 ID=cds-PDP77929.1;Parent=gene-CLI76_01260;Dbxref=NCBI_GP:PDP77929.1;Name=PDP77929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585132.1;locus_tag=CLI76_01260;product=30S ribosomal protein S6;protein_id=PDP77929.1;transl_table=11 NSLT01000004.1 Genbank gene 7795 8067 . + . ID=gene-CLI76_01265;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CLI76_01265 NSLT01000004.1 Protein Homology CDS 7795 8067 . + 0 ID=cds-PDP77930.1;Parent=gene-CLI76_01265;Dbxref=NCBI_GP:PDP77930.1;Name=PDP77930.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018108318.1;locus_tag=CLI76_01265;product=30S ribosomal protein S18;protein_id=PDP77930.1;transl_table=11 NSLT01000004.1 Genbank gene 8092 8631 . + . ID=gene-CLI76_01270;Name=CLI76_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01270 NSLT01000004.1 Protein Homology CDS 8092 8631 . + 0 ID=cds-PDP77931.1;Parent=gene-CLI76_01270;Dbxref=NCBI_GP:PDP77931.1;Name=PDP77931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816345.1;locus_tag=CLI76_01270;product=50S ribosomal protein L9;protein_id=PDP77931.1;transl_table=11 NSLT01000004.1 Genbank gene 8907 10862 . + . ID=gene-CLI76_01275;Name=CLI76_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01275 NSLT01000004.1 Protein Homology CDS 8907 10862 . + 0 ID=cds-PDP77932.1;Parent=gene-CLI76_01275;Dbxref=NCBI_GP:PDP77932.1;Name=PDP77932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816346.1;locus_tag=CLI76_01275;product=permease;protein_id=PDP77932.1;transl_table=11 NSLT01000004.1 Genbank gene 10865 12082 . + . ID=gene-CLI76_01280;Name=CLI76_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01280 NSLT01000004.1 Protein Homology CDS 10865 12082 . + 0 ID=cds-PDP77992.1;Parent=gene-CLI76_01280;Dbxref=NCBI_GP:PDP77992.1;Name=PDP77992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_097877.1;locus_tag=CLI76_01280;product=riboflavin biosynthesis protein RibBA;protein_id=PDP77992.1;transl_table=11 NSLT01000004.1 Genbank gene 12654 12866 . - . ID=gene-CLI76_01285;Name=CLI76_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01285 NSLT01000004.1 Protein Homology CDS 12654 12866 . - 0 ID=cds-PDP77933.1;Parent=gene-CLI76_01285;Dbxref=NCBI_GP:PDP77933.1;Name=PDP77933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816655.1;locus_tag=CLI76_01285;product=hypothetical protein;protein_id=PDP77933.1;transl_table=11 NSLT01000004.1 Genbank gene 12891 13931 . + . ID=gene-CLI76_01290;Name=CLI76_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01290 NSLT01000004.1 Protein Homology CDS 12891 13931 . + 0 ID=cds-PDP77934.1;Parent=gene-CLI76_01290;Dbxref=NCBI_GP:PDP77934.1;Name=PDP77934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956079.1;locus_tag=CLI76_01290;product=hypothetical protein;protein_id=PDP77934.1;transl_table=11 NSLT01000004.1 Genbank gene 13961 14656 . + . ID=gene-CLI76_01295;Name=CLI76_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01295 NSLT01000004.1 Protein Homology CDS 13961 14656 . + 0 ID=cds-PDP77935.1;Parent=gene-CLI76_01295;Dbxref=NCBI_GP:PDP77935.1;Name=PDP77935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956080.1;locus_tag=CLI76_01295;product=cytidylate kinase;protein_id=PDP77935.1;transl_table=11 NSLT01000004.1 Genbank gene 14653 15522 . + . ID=gene-CLI76_01300;Name=CLI76_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01300 NSLT01000004.1 Protein Homology CDS 14653 15522 . + 0 ID=cds-PDP77936.1;Parent=gene-CLI76_01300;Dbxref=NCBI_GP:PDP77936.1;Name=PDP77936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585140.1;locus_tag=CLI76_01300;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=PDP77936.1;transl_table=11 NSLT01000004.1 Genbank gene 15506 16549 . - . ID=gene-CLI76_01305;Name=CLI76_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01305 NSLT01000004.1 Protein Homology CDS 15506 16549 . - 0 ID=cds-PDP77993.1;Parent=gene-CLI76_01305;Dbxref=NCBI_GP:PDP77993.1;Name=PDP77993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874533.1;locus_tag=CLI76_01305;product=endonuclease;protein_id=PDP77993.1;transl_table=11 NSLT01000004.1 Genbank gene 16811 17305 . + . ID=gene-CLI76_01310;Name=CLI76_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01310 NSLT01000004.1 Protein Homology CDS 16811 17305 . + 0 ID=cds-PDP77937.1;Parent=gene-CLI76_01310;Dbxref=NCBI_GP:PDP77937.1;Name=PDP77937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874526.1;locus_tag=CLI76_01310;product=hypothetical protein;protein_id=PDP77937.1;transl_table=11 NSLT01000004.1 Genbank pseudogene 18003 18355 . - . ID=gene-CLI76_01315;Name=CLI76_01315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01315;pseudo=true NSLT01000004.1 Protein Homology CDS 18003 18355 . - 0 ID=cds-CLI76_01315;Parent=gene-CLI76_01315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956085.1;locus_tag=CLI76_01315;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000004.1 Genbank gene 18411 19343 . + . ID=gene-CLI76_01320;Name=CLI76_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01320 NSLT01000004.1 Protein Homology CDS 18411 19343 . + 0 ID=cds-PDP77938.1;Parent=gene-CLI76_01320;Dbxref=NCBI_GP:PDP77938.1;Name=PDP77938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965178.1;locus_tag=CLI76_01320;product=hypothetical protein;protein_id=PDP77938.1;transl_table=11 NSLT01000004.1 Genbank gene 19340 19543 . + . ID=gene-CLI76_01325;Name=CLI76_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01325 NSLT01000004.1 Protein Homology CDS 19340 19543 . + 0 ID=cds-PDP77939.1;Parent=gene-CLI76_01325;Dbxref=NCBI_GP:PDP77939.1;Name=PDP77939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457677.1;locus_tag=CLI76_01325;product=hypothetical protein;protein_id=PDP77939.1;transl_table=11 NSLT01000004.1 Genbank gene 19567 20256 . + . ID=gene-CLI76_01330;Name=CLI76_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01330 NSLT01000004.1 Protein Homology CDS 19567 20256 . + 0 ID=cds-PDP77940.1;Parent=gene-CLI76_01330;Dbxref=NCBI_GP:PDP77940.1;Name=PDP77940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965180.1;locus_tag=CLI76_01330;product=hypothetical protein;protein_id=PDP77940.1;transl_table=11 NSLT01000004.1 Genbank gene 20264 21208 . + . ID=gene-CLI76_01335;Name=CLI76_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01335 NSLT01000004.1 Protein Homology CDS 20264 21208 . + 0 ID=cds-PDP77941.1;Parent=gene-CLI76_01335;Dbxref=NCBI_GP:PDP77941.1;Name=PDP77941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457679.1;locus_tag=CLI76_01335;product=hypothetical protein;protein_id=PDP77941.1;transl_table=11 NSLT01000004.1 Genbank gene 21415 23214 . + . ID=gene-CLI76_01340;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CLI76_01340 NSLT01000004.1 Protein Homology CDS 21415 23214 . + 0 ID=cds-PDP77994.1;Parent=gene-CLI76_01340;Dbxref=NCBI_GP:PDP77994.1;Name=PDP77994.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147086.1;locus_tag=CLI76_01340;product=translational GTPase TypA;protein_id=PDP77994.1;transl_table=11 NSLT01000004.1 Genbank gene 23317 24351 . + . ID=gene-CLI76_01345;Name=CLI76_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01345 NSLT01000004.1 Protein Homology CDS 23317 24351 . + 0 ID=cds-PDP77942.1;Parent=gene-CLI76_01345;Dbxref=NCBI_GP:PDP77942.1;Name=PDP77942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585167.1;locus_tag=CLI76_01345;product=thioredoxin;protein_id=PDP77942.1;transl_table=11 NSLT01000004.1 Genbank gene 24762 25328 . + . ID=gene-CLI76_01350;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CLI76_01350 NSLT01000004.1 Protein Homology CDS 24762 25328 . + 0 ID=cds-PDP77943.1;Parent=gene-CLI76_01350;Dbxref=NCBI_GP:PDP77943.1;Name=PDP77943.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585168.1;locus_tag=CLI76_01350;product=peroxiredoxin;protein_id=PDP77943.1;transl_table=11 NSLT01000004.1 Genbank gene 25494 27041 . + . ID=gene-CLI76_01355;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CLI76_01355 NSLT01000004.1 Protein Homology CDS 25494 27041 . + 0 ID=cds-PDP77944.1;Parent=gene-CLI76_01355;Dbxref=NCBI_GP:PDP77944.1;Name=PDP77944.1;gbkey=CDS;gene=ahpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585169.1;locus_tag=CLI76_01355;product=alkyl hydroperoxide reductase subunit F;protein_id=PDP77944.1;transl_table=11 NSLT01000004.1 Genbank gene 27247 29784 . + . ID=gene-CLI76_01360;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CLI76_01360 NSLT01000004.1 Protein Homology CDS 27247 29784 . + 0 ID=cds-PDP77945.1;Parent=gene-CLI76_01360;Dbxref=NCBI_GP:PDP77945.1;Name=PDP77945.1;gbkey=CDS;gene=lon;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457682.1;locus_tag=CLI76_01360;product=endopeptidase La;protein_id=PDP77945.1;transl_table=11 NSLT01000004.1 Genbank gene 29781 30329 . + . ID=gene-CLI76_01365;Name=CLI76_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01365 NSLT01000004.1 Protein Homology CDS 29781 30329 . + 0 ID=cds-PDP77946.1;Parent=gene-CLI76_01365;Dbxref=NCBI_GP:PDP77946.1;Name=PDP77946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585171.1;locus_tag=CLI76_01365;product=DUF1599 domain-containing protein;protein_id=PDP77946.1;transl_table=11 NSLT01000004.1 Genbank gene 30326 31618 . + . ID=gene-CLI76_01370;Name=CLI76_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01370 NSLT01000004.1 Protein Homology CDS 30326 31618 . + 0 ID=cds-PDP77947.1;Parent=gene-CLI76_01370;Dbxref=NCBI_GP:PDP77947.1;Name=PDP77947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816368.1;locus_tag=CLI76_01370;product=DoxX family protein;protein_id=PDP77947.1;transl_table=11 NSLT01000004.1 Genbank gene 31650 32405 . + . ID=gene-CLI76_01375;Name=CLI76_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01375 NSLT01000004.1 Protein Homology CDS 31650 32405 . + 0 ID=cds-PDP77948.1;Parent=gene-CLI76_01375;Dbxref=NCBI_GP:PDP77948.1;Name=PDP77948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457684.1;locus_tag=CLI76_01375;product=triose-phosphate isomerase;protein_id=PDP77948.1;transl_table=11 NSLT01000004.1 Genbank gene 32467 32973 . + . ID=gene-CLI76_01380;Name=CLI76_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01380 NSLT01000004.1 Protein Homology CDS 32467 32973 . + 0 ID=cds-PDP77949.1;Parent=gene-CLI76_01380;Dbxref=NCBI_GP:PDP77949.1;Name=PDP77949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585174.1;locus_tag=CLI76_01380;product=SPOR domain-containing protein;protein_id=PDP77949.1;transl_table=11 NSLT01000004.1 Genbank gene 32977 33558 . + . ID=gene-CLI76_01385;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CLI76_01385 NSLT01000004.1 Protein Homology CDS 32977 33558 . + 0 ID=cds-PDP77950.1;Parent=gene-CLI76_01385;Dbxref=NCBI_GP:PDP77950.1;Name=PDP77950.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585175.1;locus_tag=CLI76_01385;product=GTP cyclohydrolase I FolE;protein_id=PDP77950.1;transl_table=11 NSLT01000004.1 Genbank pseudogene 33748 33849 . + . ID=gene-CLI76_01390;Name=CLI76_01390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01390;pseudo=true NSLT01000004.1 Protein Homology CDS 33748 33849 . + 0 ID=cds-CLI76_01390;Parent=gene-CLI76_01390;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874512.1;locus_tag=CLI76_01390;product=secretion protein;pseudo=true;transl_table=11 NSLT01000004.1 Genbank gene 34237 34434 . + . ID=gene-CLI76_01395;Name=CLI76_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01395 NSLT01000004.1 Protein Homology CDS 34237 34434 . + 0 ID=cds-PDP77951.1;Parent=gene-CLI76_01395;Dbxref=NCBI_GP:PDP77951.1;Name=PDP77951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815891.1;locus_tag=CLI76_01395;product=hypothetical protein;protein_id=PDP77951.1;transl_table=11 NSLT01000004.1 Genbank gene 34719 35012 . - . ID=gene-CLI76_01400;Name=CLI76_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01400 NSLT01000004.1 Protein Homology CDS 34719 35012 . - 0 ID=cds-PDP77952.1;Parent=gene-CLI76_01400;Dbxref=NCBI_GP:PDP77952.1;Name=PDP77952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965046.1;locus_tag=CLI76_01400;product=RNA-binding protein;protein_id=PDP77952.1;transl_table=11 NSLT01000004.1 Genbank gene 35261 36016 . - . ID=gene-CLI76_01405;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CLI76_01405 NSLT01000004.1 Protein Homology CDS 35261 36016 . - 0 ID=cds-PDP77953.1;Parent=gene-CLI76_01405;Dbxref=NCBI_GP:PDP77953.1;Name=PDP77953.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956092.1;locus_tag=CLI76_01405;product=LPS export ABC transporter ATP-binding protein;protein_id=PDP77953.1;transl_table=11 NSLT01000004.1 Genbank gene 36075 36941 . - . ID=gene-CLI76_01410;Name=CLI76_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01410 NSLT01000004.1 Protein Homology CDS 36075 36941 . - 0 ID=cds-PDP77954.1;Parent=gene-CLI76_01410;Dbxref=NCBI_GP:PDP77954.1;Name=PDP77954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965045.1;locus_tag=CLI76_01410;product=NAD kinase;protein_id=PDP77954.1;transl_table=11 NSLT01000004.1 Genbank gene 37019 37735 . + . ID=gene-CLI76_01415;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CLI76_01415 NSLT01000004.1 Protein Homology CDS 37019 37735 . + 0 ID=cds-PDP77955.1;Parent=gene-CLI76_01415;Dbxref=NCBI_GP:PDP77955.1;Name=PDP77955.1;gbkey=CDS;gene=pdxJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457687.1;locus_tag=CLI76_01415;product=pyridoxine 5'-phosphate synthase;protein_id=PDP77955.1;transl_table=11 NSLT01000004.1 Genbank gene 37773 38507 . + . ID=gene-CLI76_01420;Name=CLI76_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01420 NSLT01000004.1 Protein Homology CDS 37773 38507 . + 0 ID=cds-PDP77956.1;Parent=gene-CLI76_01420;Dbxref=NCBI_GP:PDP77956.1;Name=PDP77956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874528.1;locus_tag=CLI76_01420;product=MotA/TolQ/ExbB proton channel family protein;protein_id=PDP77956.1;transl_table=11 NSLT01000004.1 Genbank gene 38504 38923 . + . ID=gene-CLI76_01425;Name=CLI76_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01425 NSLT01000004.1 Protein Homology CDS 38504 38923 . + 0 ID=cds-PDP77957.1;Parent=gene-CLI76_01425;Dbxref=NCBI_GP:PDP77957.1;Name=PDP77957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956094.1;locus_tag=CLI76_01425;product=biopolymer transporter ExbD;protein_id=PDP77957.1;transl_table=11 NSLT01000004.1 Genbank gene 38928 39755 . + . ID=gene-CLI76_01430;Name=CLI76_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01430 NSLT01000004.1 Protein Homology CDS 38928 39755 . + 0 ID=cds-PDP77958.1;Parent=gene-CLI76_01430;Dbxref=NCBI_GP:PDP77958.1;Name=PDP77958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585183.1;locus_tag=CLI76_01430;product=energy transducer TonB;protein_id=PDP77958.1;transl_table=11 NSLT01000004.1 Genbank gene 39770 40315 . + . ID=gene-CLI76_01435;Name=CLI76_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01435 NSLT01000004.1 Protein Homology CDS 39770 40315 . + 0 ID=cds-PDP77959.1;Parent=gene-CLI76_01435;Dbxref=NCBI_GP:PDP77959.1;Name=PDP77959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585184.1;locus_tag=CLI76_01435;product=DJ-1 family protein;protein_id=PDP77959.1;transl_table=11 NSLT01000004.1 Genbank gene 40415 41287 . - . ID=gene-CLI76_01440;Name=CLI76_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01440 NSLT01000004.1 Protein Homology CDS 40415 41287 . - 0 ID=cds-PDP77960.1;Parent=gene-CLI76_01440;Dbxref=NCBI_GP:PDP77960.1;Name=PDP77960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816375.1;locus_tag=CLI76_01440;product=50S ribosomal protein L11 methyltransferase;protein_id=PDP77960.1;transl_table=11 NSLT01000004.1 Genbank gene 41284 42648 . - . ID=gene-CLI76_01445;Name=CLI76_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01445 NSLT01000004.1 Protein Homology CDS 41284 42648 . - 0 ID=cds-PDP77961.1;Parent=gene-CLI76_01445;Dbxref=NCBI_GP:PDP77961.1;Name=PDP77961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585186.1;locus_tag=CLI76_01445;product=MATE family efflux transporter;protein_id=PDP77961.1;transl_table=11 NSLT01000004.1 Genbank gene 42641 43681 . - . ID=gene-CLI76_01450;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CLI76_01450 NSLT01000004.1 Protein Homology CDS 42641 43681 . - 0 ID=cds-PDP77962.1;Parent=gene-CLI76_01450;Dbxref=NCBI_GP:PDP77962.1;Name=PDP77962.1;gbkey=CDS;gene=thiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965038.1;locus_tag=CLI76_01450;product=thiamine-phosphate kinase;protein_id=PDP77962.1;transl_table=11 NSLT01000004.1 Genbank gene 43687 44760 . - . ID=gene-CLI76_01455;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CLI76_01455 NSLT01000004.1 Protein Homology CDS 43687 44760 . - 0 ID=cds-PDP77963.1;Parent=gene-CLI76_01455;Dbxref=NCBI_GP:PDP77963.1;Name=PDP77963.1;gbkey=CDS;gene=lpxK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585188.1;locus_tag=CLI76_01455;product=tetraacyldisaccharide 4'-kinase;protein_id=PDP77963.1;transl_table=11 NSLT01000004.1 Genbank gene 44790 46577 . - . ID=gene-CLI76_01460;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CLI76_01460 NSLT01000004.1 Protein Homology CDS 44790 46577 . - 0 ID=cds-PDP77964.1;Parent=gene-CLI76_01460;Dbxref=NCBI_GP:PDP77964.1;Name=PDP77964.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956096.1;locus_tag=CLI76_01460;product=signal peptide peptidase SppA;protein_id=PDP77964.1;transl_table=11 NSLT01000004.1 Genbank gene 46840 47040 . - . ID=gene-CLI76_01465;Name=CLI76_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01465 NSLT01000004.1 Protein Homology CDS 46840 47040 . - 0 ID=cds-PDP77965.1;Parent=gene-CLI76_01465;Dbxref=NCBI_GP:PDP77965.1;Name=PDP77965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815466.1;locus_tag=CLI76_01465;product=hypothetical protein;protein_id=PDP77965.1;transl_table=11 NSLT01000004.1 Genbank gene 48212 50332 . - . ID=gene-CLI76_01470;Name=CLI76_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01470 NSLT01000004.1 Protein Homology CDS 48212 50332 . - 0 ID=cds-PDP77966.1;Parent=gene-CLI76_01470;Dbxref=NCBI_GP:PDP77966.1;Name=PDP77966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965035.1;locus_tag=CLI76_01470;product=energy transducer TonB;protein_id=PDP77966.1;transl_table=11 NSLT01000004.1 Genbank gene 50346 51509 . - . ID=gene-CLI76_01475;Name=CLI76_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01475 NSLT01000004.1 Protein Homology CDS 50346 51509 . - 0 ID=cds-PDP77995.1;Parent=gene-CLI76_01475;Dbxref=NCBI_GP:PDP77995.1;Name=PDP77995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457697.1;locus_tag=CLI76_01475;product=adenosylcobinamide amidohydrolase;protein_id=PDP77995.1;transl_table=11 NSLT01000004.1 Genbank gene 51533 52534 . - . ID=gene-CLI76_01480;Name=CLI76_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01480 NSLT01000004.1 Protein Homology CDS 51533 52534 . - 0 ID=cds-PDP77967.1;Parent=gene-CLI76_01480;Dbxref=NCBI_GP:PDP77967.1;Name=PDP77967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965033.1;locus_tag=CLI76_01480;product=iron ABC transporter;protein_id=PDP77967.1;transl_table=11 NSLT01000004.1 Genbank gene 52542 53576 . - . ID=gene-CLI76_01485;Name=CLI76_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01485 NSLT01000004.1 Protein Homology CDS 52542 53576 . - 0 ID=cds-PDP77968.1;Parent=gene-CLI76_01485;Dbxref=NCBI_GP:PDP77968.1;Name=PDP77968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457699.1;locus_tag=CLI76_01485;product=iron ABC transporter permease;protein_id=PDP77968.1;transl_table=11 NSLT01000004.1 Genbank gene 53573 54748 . - . ID=gene-CLI76_01490;Name=CLI76_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01490 NSLT01000004.1 Protein Homology CDS 53573 54748 . - 0 ID=cds-PDP77969.1;Parent=gene-CLI76_01490;Dbxref=NCBI_GP:PDP77969.1;Name=PDP77969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965031.1;locus_tag=CLI76_01490;product=iron ABC transporter substrate-binding protein;protein_id=PDP77969.1;transl_table=11 NSLT01000004.1 cmsearch riboswitch 54895 55097 . - . ID=id-NSLT01000004.1:54895..55097;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000004.1 Genbank gene 55331 55915 . + . ID=gene-CLI76_01495;Name=CLI76_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01495 NSLT01000004.1 Protein Homology CDS 55331 55915 . + 0 ID=cds-PDP77970.1;Parent=gene-CLI76_01495;Dbxref=NCBI_GP:PDP77970.1;Name=PDP77970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873586.1;locus_tag=CLI76_01495;product=hypothetical protein;protein_id=PDP77970.1;transl_table=11 NSLT01000004.1 Genbank gene 56042 56425 . - . ID=gene-CLI76_01500;Name=CLI76_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01500 NSLT01000004.1 Protein Homology CDS 56042 56425 . - 0 ID=cds-PDP77971.1;Parent=gene-CLI76_01500;Dbxref=NCBI_GP:PDP77971.1;Name=PDP77971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965183.1;locus_tag=CLI76_01500;product=DUF3276 domain-containing protein;protein_id=PDP77971.1;transl_table=11 NSLT01000004.1 Genbank gene 56532 57083 . - . ID=gene-CLI76_01505;Name=CLI76_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01505 NSLT01000004.1 Protein Homology CDS 56532 57083 . - 0 ID=cds-PDP77972.1;Parent=gene-CLI76_01505;Dbxref=NCBI_GP:PDP77972.1;Name=PDP77972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816386.1;locus_tag=CLI76_01505;product=phosphohydrolase;protein_id=PDP77972.1;transl_table=11 NSLT01000004.1 Genbank gene 57110 57193 . - . ID=gene-CLI76_01510;Name=CLI76_01510;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_01510 NSLT01000004.1 tRNAscan-SE tRNA 57110 57193 . - . ID=rna-CLI76_01510;Parent=gene-CLI76_01510;anticodon=(pos:complement(57157..57159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01510;product=tRNA-Leu NSLT01000004.1 tRNAscan-SE exon 57110 57193 . - . ID=exon-CLI76_01510-1;Parent=rna-CLI76_01510;anticodon=(pos:complement(57157..57159));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01510;product=tRNA-Leu NSLT01000004.1 Genbank gene 57360 57662 . - . ID=gene-CLI76_01515;Name=CLI76_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01515 NSLT01000004.1 Protein Homology CDS 57360 57662 . - 0 ID=cds-PDP77973.1;Parent=gene-CLI76_01515;Dbxref=NCBI_GP:PDP77973.1;Name=PDP77973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457703.1;locus_tag=CLI76_01515;product=stress responsive protein;protein_id=PDP77973.1;transl_table=11 NSLT01000004.1 Genbank gene 57674 58915 . - . ID=gene-CLI76_01520;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CLI76_01520 NSLT01000004.1 Protein Homology CDS 57674 58915 . - 0 ID=cds-PDP77974.1;Parent=gene-CLI76_01520;Dbxref=NCBI_GP:PDP77974.1;Name=PDP77974.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585202.1;locus_tag=CLI76_01520;product=phosphoserine phosphatase SerB;protein_id=PDP77974.1;transl_table=11 NSLT01000004.1 Genbank gene 58974 60146 . - . ID=gene-CLI76_01525;Name=CLI76_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01525 NSLT01000004.1 Protein Homology CDS 58974 60146 . - 0 ID=cds-PDP77975.1;Parent=gene-CLI76_01525;Dbxref=NCBI_GP:PDP77975.1;Name=PDP77975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873571.1;locus_tag=CLI76_01525;product=secretion protein;protein_id=PDP77975.1;transl_table=11 NSLT01000004.1 Genbank gene 60406 60558 . - . ID=gene-CLI76_01530;Name=CLI76_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01530 NSLT01000004.1 Protein Homology CDS 60406 60558 . - 0 ID=cds-PDP77976.1;Parent=gene-CLI76_01530;Dbxref=NCBI_GP:PDP77976.1;Name=PDP77976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002558970.1;locus_tag=CLI76_01530;product=50S ribosomal protein L34;protein_id=PDP77976.1;transl_table=11 NSLT01000004.1 Genbank gene 60620 61219 . - . ID=gene-CLI76_01535;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=CLI76_01535 NSLT01000004.1 Protein Homology CDS 60620 61219 . - 0 ID=cds-PDP77977.1;Parent=gene-CLI76_01535;Dbxref=NCBI_GP:PDP77977.1;Name=PDP77977.1;gbkey=CDS;gene=maf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964846.1;locus_tag=CLI76_01535;product=maf-like protein;protein_id=PDP77977.1;transl_table=11 NSLT01000004.1 Genbank gene 61259 61780 . - . ID=gene-CLI76_01540;Name=CLI76_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01540 NSLT01000004.1 Protein Homology CDS 61259 61780 . - 0 ID=cds-PDP77978.1;Parent=gene-CLI76_01540;Dbxref=NCBI_GP:PDP77978.1;Name=PDP77978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457706.1;locus_tag=CLI76_01540;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=PDP77978.1;transl_table=11 NSLT01000004.1 Genbank gene 61797 62609 . - . ID=gene-CLI76_01545;Name=CLI76_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01545 NSLT01000004.1 Protein Homology CDS 61797 62609 . - 0 ID=cds-PDP77979.1;Parent=gene-CLI76_01545;Dbxref=NCBI_GP:PDP77979.1;Name=PDP77979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964845.1;locus_tag=CLI76_01545;product=F420-dependent NADP oxidoreductase;protein_id=PDP77979.1;transl_table=11 NSLT01000004.1 Genbank gene 62602 63156 . - . ID=gene-CLI76_01550;Name=CLI76_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01550 NSLT01000004.1 Protein Homology CDS 62602 63156 . - 0 ID=cds-PDP77980.1;Parent=gene-CLI76_01550;Dbxref=NCBI_GP:PDP77980.1;Name=PDP77980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585209.1;locus_tag=CLI76_01550;product=NAD(P)H nitroreductase;protein_id=PDP77980.1;transl_table=11 NSLT01000004.1 Genbank gene 63378 63566 . + . ID=gene-CLI76_01555;Name=CLI76_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01555 NSLT01000004.1 Protein Homology CDS 63378 63566 . + 0 ID=cds-PDP77981.1;Parent=gene-CLI76_01555;Dbxref=NCBI_GP:PDP77981.1;Name=PDP77981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956103.1;locus_tag=CLI76_01555;product=hypothetical protein;protein_id=PDP77981.1;transl_table=11 NSLT01000004.1 Genbank pseudogene 63504 63791 . - . ID=gene-CLI76_01560;Name=CLI76_01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01560;pseudo=true NSLT01000004.1 Protein Homology CDS 63504 63791 . - 0 ID=cds-CLI76_01560;Parent=gene-CLI76_01560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585276.1;locus_tag=CLI76_01560;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000004.1 Genbank gene 63870 65273 . + . ID=gene-CLI76_01565;Name=CLI76_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01565 NSLT01000004.1 Protein Homology CDS 63870 65273 . + 0 ID=cds-PDP77996.1;Parent=gene-CLI76_01565;Dbxref=NCBI_GP:PDP77996.1;Name=PDP77996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_813154.1;locus_tag=CLI76_01565;product=glycosyl hydrolase;protein_id=PDP77996.1;transl_table=11 NSLT01000004.1 Genbank gene 65287 68658 . + . ID=gene-CLI76_01570;Name=CLI76_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01570 NSLT01000004.1 Protein Homology CDS 65287 68658 . + 0 ID=cds-PDP77982.1;Parent=gene-CLI76_01570;Dbxref=NCBI_GP:PDP77982.1;Name=PDP77982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457710.1;locus_tag=CLI76_01570;product=beta-galactosidase;protein_id=PDP77982.1;transl_table=11 NSLT01000004.1 Genbank gene 68741 69829 . + . ID=gene-CLI76_01575;Name=CLI76_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01575 NSLT01000004.1 Protein Homology CDS 68741 69829 . + 0 ID=cds-PDP77983.1;Parent=gene-CLI76_01575;Dbxref=NCBI_GP:PDP77983.1;Name=PDP77983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873569.1;locus_tag=CLI76_01575;product=aminoglycoside phosphotransferase;protein_id=PDP77983.1;transl_table=11 NSLT01000004.1 Genbank gene 69875 70177 . + . ID=gene-CLI76_01580;Name=CLI76_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01580 NSLT01000004.1 GeneMarkS+ CDS 69875 70177 . + 0 ID=cds-PDP77984.1;Parent=gene-CLI76_01580;Dbxref=NCBI_GP:PDP77984.1;Name=PDP77984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01580;product=hypothetical protein;protein_id=PDP77984.1;transl_table=11 NSLT01000004.1 Genbank gene 70185 72455 . + . ID=gene-CLI76_01585;Name=CLI76_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01585 NSLT01000004.1 GeneMarkS+ CDS 70185 72455 . + 0 ID=cds-PDP77985.1;Parent=gene-CLI76_01585;Dbxref=NCBI_GP:PDP77985.1;Name=PDP77985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01585;product=hypothetical protein;protein_id=PDP77985.1;transl_table=11 NSLT01000004.1 cmsearch riboswitch 72476 72713 . + . ID=id-NSLT01000004.1:72476..72713;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000004.1 Genbank gene 72910 75183 . + . ID=gene-CLI76_01590;Name=CLI76_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01590 NSLT01000004.1 Protein Homology CDS 72910 75183 . + 0 ID=cds-PDP77986.1;Parent=gene-CLI76_01590;Dbxref=NCBI_GP:PDP77986.1;Name=PDP77986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873547.1;locus_tag=CLI76_01590;product=TonB-dependent receptor;protein_id=PDP77986.1;transl_table=11 NSLT01000004.1 Genbank gene 75212 76093 . + . ID=gene-CLI76_01595;Name=CLI76_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01595 NSLT01000004.1 Protein Homology CDS 75212 76093 . + 0 ID=cds-PDP77987.1;Parent=gene-CLI76_01595;Dbxref=NCBI_GP:PDP77987.1;Name=PDP77987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585217.1;locus_tag=CLI76_01595;product=heme-binding protein;protein_id=PDP77987.1;transl_table=11 NSLT01000004.1 Genbank gene 76211 77350 . + . ID=gene-CLI76_01600;Name=CLI76_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01600 NSLT01000004.1 Protein Homology CDS 76211 77350 . + 0 ID=cds-PDP77988.1;Parent=gene-CLI76_01600;Dbxref=NCBI_GP:PDP77988.1;Name=PDP77988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457715.1;locus_tag=CLI76_01600;product=iron ABC transporter substrate-binding protein;protein_id=PDP77988.1;transl_table=11 NSLT01000004.1 Genbank gene 77347 78417 . + . ID=gene-CLI76_01605;Name=CLI76_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01605 NSLT01000004.1 Protein Homology CDS 77347 78417 . + 0 ID=cds-PDP77989.1;Parent=gene-CLI76_01605;Dbxref=NCBI_GP:PDP77989.1;Name=PDP77989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816397.1;locus_tag=CLI76_01605;product=iron ABC transporter permease;protein_id=PDP77989.1;transl_table=11 NSLT01000004.1 Genbank gene 78461 79219 . + . ID=gene-CLI76_01610;Name=CLI76_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01610 NSLT01000004.1 Protein Homology CDS 78461 79219 . + 0 ID=cds-PDP77990.1;Parent=gene-CLI76_01610;Dbxref=NCBI_GP:PDP77990.1;Name=PDP77990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585220.1;locus_tag=CLI76_01610;product=ABC transporter ATP-binding protein;protein_id=PDP77990.1;transl_table=11 NSLT01000004.1 Genbank gene 79552 80333 . - . ID=gene-CLI76_01615;Name=CLI76_01615;end_range=80333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01615;partial=true NSLT01000004.1 Protein Homology CDS 79552 80333 . - 2 ID=cds-PDP77991.1;Parent=gene-CLI76_01615;Dbxref=NCBI_GP:PDP77991.1;Name=PDP77991.1;end_range=80333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_01615;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP77991.1;transl_table=11 ##sequence-region NSLT01000050.1 1 16389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000050.1 Genbank region 1 16389 . + . ID=NSLT01000050.1:1..16389;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000050.1 Genbank gene 1 848 . - . ID=gene-CLI76_08745;Name=CLI76_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08745;partial=true;start_range=.,1 NSLT01000050.1 Protein Homology CDS 1 848 . - 0 ID=cds-PDP76615.1;Parent=gene-CLI76_08745;Dbxref=NCBI_GP:PDP76615.1;Name=PDP76615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_08745;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76615.1;start_range=.,1;transl_table=11 NSLT01000050.1 Genbank gene 1069 1153 . + . ID=gene-CLI76_08750;Name=CLI76_08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_08750 NSLT01000050.1 tRNAscan-SE tRNA 1069 1153 . + . ID=rna-CLI76_08750;Parent=gene-CLI76_08750;anticodon=(pos:1103..1105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08750;product=tRNA-Ser NSLT01000050.1 tRNAscan-SE exon 1069 1153 . + . ID=exon-CLI76_08750-1;Parent=rna-CLI76_08750;anticodon=(pos:1103..1105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_08750;product=tRNA-Ser NSLT01000050.1 Genbank gene 1524 2747 . + . ID=gene-CLI76_08755;Name=CLI76_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08755 NSLT01000050.1 Protein Homology CDS 1524 2747 . + 0 ID=cds-PDP76602.1;Parent=gene-CLI76_08755;Dbxref=NCBI_GP:PDP76602.1;Name=PDP76602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911220.1;locus_tag=CLI76_08755;product=integrase;protein_id=PDP76602.1;transl_table=11 NSLT01000050.1 Genbank gene 2783 3253 . + . ID=gene-CLI76_08760;Name=CLI76_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08760 NSLT01000050.1 Protein Homology CDS 2783 3253 . + 0 ID=cds-PDP76603.1;Parent=gene-CLI76_08760;Dbxref=NCBI_GP:PDP76603.1;Name=PDP76603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964931.1;locus_tag=CLI76_08760;product=hypothetical protein;protein_id=PDP76603.1;transl_table=11 NSLT01000050.1 Genbank gene 3388 3723 . + . ID=gene-CLI76_08765;Name=CLI76_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08765 NSLT01000050.1 Protein Homology CDS 3388 3723 . + 0 ID=cds-PDP76616.1;Parent=gene-CLI76_08765;Dbxref=NCBI_GP:PDP76616.1;Name=PDP76616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227185.1;locus_tag=CLI76_08765;product=hypothetical protein;protein_id=PDP76616.1;transl_table=11 NSLT01000050.1 Genbank gene 4152 4583 . + . ID=gene-CLI76_08770;Name=CLI76_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08770 NSLT01000050.1 Protein Homology CDS 4152 4583 . + 0 ID=cds-PDP76604.1;Parent=gene-CLI76_08770;Dbxref=NCBI_GP:PDP76604.1;Name=PDP76604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004374602.1;locus_tag=CLI76_08770;product=hypothetical protein;protein_id=PDP76604.1;transl_table=11 NSLT01000050.1 Genbank gene 4912 5334 . + . ID=gene-CLI76_08775;Name=CLI76_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08775 NSLT01000050.1 Protein Homology CDS 4912 5334 . + 0 ID=cds-PDP76605.1;Parent=gene-CLI76_08775;Dbxref=NCBI_GP:PDP76605.1;Name=PDP76605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467900.1;locus_tag=CLI76_08775;product=PcfK-like protein;protein_id=PDP76605.1;transl_table=11 NSLT01000050.1 Genbank gene 5339 6604 . + . ID=gene-CLI76_08780;Name=CLI76_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08780 NSLT01000050.1 Protein Homology CDS 5339 6604 . + 0 ID=cds-PDP76606.1;Parent=gene-CLI76_08780;Dbxref=NCBI_GP:PDP76606.1;Name=PDP76606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432521.1;locus_tag=CLI76_08780;product=PcfJ-like protein;protein_id=PDP76606.1;transl_table=11 NSLT01000050.1 Genbank gene 6787 7359 . - . ID=gene-CLI76_08785;Name=CLI76_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08785 NSLT01000050.1 Protein Homology CDS 6787 7359 . - 0 ID=cds-PDP76607.1;Parent=gene-CLI76_08785;Dbxref=NCBI_GP:PDP76607.1;Name=PDP76607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005942818.1;locus_tag=CLI76_08785;product=hypothetical protein;protein_id=PDP76607.1;transl_table=11 NSLT01000050.1 Genbank gene 7478 7978 . - . ID=gene-CLI76_08790;Name=CLI76_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08790 NSLT01000050.1 Protein Homology CDS 7478 7978 . - 0 ID=cds-PDP76608.1;Parent=gene-CLI76_08790;Dbxref=NCBI_GP:PDP76608.1;Name=PDP76608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018572087.1;locus_tag=CLI76_08790;product=lysozyme;protein_id=PDP76608.1;transl_table=11 NSLT01000050.1 Genbank gene 7971 8423 . - . ID=gene-CLI76_08795;Name=CLI76_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08795 NSLT01000050.1 Protein Homology CDS 7971 8423 . - 0 ID=cds-PDP76609.1;Parent=gene-CLI76_08795;Dbxref=NCBI_GP:PDP76609.1;Name=PDP76609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352305.1;locus_tag=CLI76_08795;product=DUF3872 domain-containing protein;protein_id=PDP76609.1;transl_table=11 NSLT01000050.1 Genbank gene 8438 9019 . - . ID=gene-CLI76_08800;Name=CLI76_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08800 NSLT01000050.1 Protein Homology CDS 8438 9019 . - 0 ID=cds-PDP76617.1;Parent=gene-CLI76_08800;Dbxref=NCBI_GP:PDP76617.1;Name=PDP76617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347092.1;locus_tag=CLI76_08800;product=conjugal transfer protein TraO;protein_id=PDP76617.1;transl_table=11 NSLT01000050.1 Genbank gene 9025 9963 . - . ID=gene-CLI76_08805;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI76_08805 NSLT01000050.1 Protein Homology CDS 9025 9963 . - 0 ID=cds-PDP76610.1;Parent=gene-CLI76_08805;Dbxref=NCBI_GP:PDP76610.1;Name=PDP76610.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1;locus_tag=CLI76_08805;product=conjugative transposon protein TraN;protein_id=PDP76610.1;transl_table=11 NSLT01000050.1 Genbank gene 10113 11351 . - . ID=gene-CLI76_08810;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI76_08810 NSLT01000050.1 Protein Homology CDS 10113 11351 . - 0 ID=cds-PDP76611.1;Parent=gene-CLI76_08810;Dbxref=NCBI_GP:PDP76611.1;Name=PDP76611.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671526.1;locus_tag=CLI76_08810;product=conjugative transposon protein TraM;protein_id=PDP76611.1;transl_table=11 NSLT01000050.1 Genbank gene 11344 11637 . - . ID=gene-CLI76_08815;Name=CLI76_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08815 NSLT01000050.1 Protein Homology CDS 11344 11637 . - 0 ID=cds-PDP76618.1;Parent=gene-CLI76_08815;Dbxref=NCBI_GP:PDP76618.1;Name=PDP76618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339673.1;locus_tag=CLI76_08815;product=hypothetical protein;protein_id=PDP76618.1;transl_table=11 NSLT01000050.1 Genbank gene 11642 12265 . - . ID=gene-CLI76_08820;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CLI76_08820 NSLT01000050.1 Protein Homology CDS 11642 12265 . - 0 ID=cds-PDP76612.1;Parent=gene-CLI76_08820;Dbxref=NCBI_GP:PDP76612.1;Name=PDP76612.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1;locus_tag=CLI76_08820;product=conjugative transposon protein TraK;protein_id=PDP76612.1;transl_table=11 NSLT01000050.1 Genbank gene 12290 13333 . - . ID=gene-CLI76_08825;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CLI76_08825 NSLT01000050.1 Protein Homology CDS 12290 13333 . - 0 ID=cds-PDP76613.1;Parent=gene-CLI76_08825;Dbxref=NCBI_GP:PDP76613.1;Name=PDP76613.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009434717.1;locus_tag=CLI76_08825;product=conjugative transposon protein TraJ;protein_id=PDP76613.1;transl_table=11 NSLT01000050.1 Genbank gene 13337 13966 . - . ID=gene-CLI76_08830;Name=CLI76_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08830 NSLT01000050.1 Protein Homology CDS 13337 13966 . - 0 ID=cds-PDP76614.1;Parent=gene-CLI76_08830;Dbxref=NCBI_GP:PDP76614.1;Name=PDP76614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008449143.1;locus_tag=CLI76_08830;product=hypothetical protein;protein_id=PDP76614.1;transl_table=11 NSLT01000050.1 Genbank pseudogene 13989 16268 . - . ID=gene-CLI76_08835;Name=CLI76_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08835;pseudo=true NSLT01000050.1 Protein Homology CDS 13989 16268 . - 0 ID=cds-CLI76_08835;Parent=gene-CLI76_08835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964946.1;locus_tag=CLI76_08835;product=conjugal transfer protein TraG;pseudo=true;transl_table=11 ##sequence-region NSLT01000051.1 1 16281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000051.1 Genbank region 1 16281 . + . ID=NSLT01000051.1:1..16281;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000051.1 Genbank pseudogene 26 124 . + . ID=gene-CLI76_08840;Name=CLI76_08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08840;pseudo=true NSLT01000051.1 Protein Homology CDS 26 124 . + 0 ID=cds-CLI76_08840;Parent=gene-CLI76_08840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874956.1;locus_tag=CLI76_08840;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000051.1 Genbank pseudogene 125 625 . - . ID=gene-CLI76_08845;Name=CLI76_08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08845;pseudo=true NSLT01000051.1 Protein Homology CDS 125 625 . - 0 ID=cds-CLI76_08845;Parent=gene-CLI76_08845;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316495.1;locus_tag=CLI76_08845;product=integrase;pseudo=true;transl_table=11 NSLT01000051.1 Genbank gene 714 1616 . - . ID=gene-CLI76_08850;Name=CLI76_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08850 NSLT01000051.1 Protein Homology CDS 714 1616 . - 0 ID=cds-PDP76589.1;Parent=gene-CLI76_08850;Dbxref=NCBI_GP:PDP76589.1;Name=PDP76589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956146.1;locus_tag=CLI76_08850;product=DNA-binding protein;protein_id=PDP76589.1;transl_table=11 NSLT01000051.1 Genbank gene 1862 3286 . - . ID=gene-CLI76_08855;Name=CLI76_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08855 NSLT01000051.1 Protein Homology CDS 1862 3286 . - 0 ID=cds-PDP76590.1;Parent=gene-CLI76_08855;Dbxref=NCBI_GP:PDP76590.1;Name=PDP76590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815672.1;locus_tag=CLI76_08855;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=PDP76590.1;transl_table=11 NSLT01000051.1 Genbank gene 3450 4361 . - . ID=gene-CLI76_08860;Name=CLI76_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08860 NSLT01000051.1 Protein Homology CDS 3450 4361 . - 0 ID=cds-PDP76591.1;Parent=gene-CLI76_08860;Dbxref=NCBI_GP:PDP76591.1;Name=PDP76591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874194.1;locus_tag=CLI76_08860;product=hypothetical protein;protein_id=PDP76591.1;transl_table=11 NSLT01000051.1 Genbank gene 4531 4908 . - . ID=gene-CLI76_08865;Name=CLI76_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08865 NSLT01000051.1 Protein Homology CDS 4531 4908 . - 0 ID=cds-PDP76592.1;Parent=gene-CLI76_08865;Dbxref=NCBI_GP:PDP76592.1;Name=PDP76592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457908.1;locus_tag=CLI76_08865;product=hypothetical protein;protein_id=PDP76592.1;transl_table=11 NSLT01000051.1 Genbank gene 5235 5690 . + . ID=gene-CLI76_08870;Name=CLI76_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08870 NSLT01000051.1 Protein Homology CDS 5235 5690 . + 0 ID=cds-PDP76593.1;Parent=gene-CLI76_08870;Dbxref=NCBI_GP:PDP76593.1;Name=PDP76593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874193.1;locus_tag=CLI76_08870;product=thioredoxin-dependent thiol peroxidase;protein_id=PDP76593.1;transl_table=11 NSLT01000051.1 Genbank gene 5711 6733 . + . ID=gene-CLI76_08875;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CLI76_08875 NSLT01000051.1 Protein Homology CDS 5711 6733 . + 0 ID=cds-PDP76594.1;Parent=gene-CLI76_08875;Dbxref=NCBI_GP:PDP76594.1;Name=PDP76594.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584116.1;locus_tag=CLI76_08875;product=recombinase RecA;protein_id=PDP76594.1;transl_table=11 NSLT01000051.1 Genbank gene 6807 7772 . + . ID=gene-CLI76_08880;Name=CLI76_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08880 NSLT01000051.1 Protein Homology CDS 6807 7772 . + 0 ID=cds-PDP76595.1;Parent=gene-CLI76_08880;Dbxref=NCBI_GP:PDP76595.1;Name=PDP76595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965636.1;locus_tag=CLI76_08880;product=GNAT family N-acetyltransferase;protein_id=PDP76595.1;transl_table=11 NSLT01000051.1 Genbank gene 7769 9130 . + . ID=gene-CLI76_08885;Name=CLI76_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08885 NSLT01000051.1 Protein Homology CDS 7769 9130 . + 0 ID=cds-PDP76596.1;Parent=gene-CLI76_08885;Dbxref=NCBI_GP:PDP76596.1;Name=PDP76596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584118.1;locus_tag=CLI76_08885;product=hypothetical protein;protein_id=PDP76596.1;transl_table=11 NSLT01000051.1 Genbank gene 9127 10377 . + . ID=gene-CLI76_08890;Name=CLI76_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08890 NSLT01000051.1 Protein Homology CDS 9127 10377 . + 0 ID=cds-PDP76597.1;Parent=gene-CLI76_08890;Dbxref=NCBI_GP:PDP76597.1;Name=PDP76597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584119.1;locus_tag=CLI76_08890;product=glycosyl transferase family 1;protein_id=PDP76597.1;transl_table=11 NSLT01000051.1 Genbank gene 10393 11493 . + . ID=gene-CLI76_08895;Name=CLI76_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08895 NSLT01000051.1 Protein Homology CDS 10393 11493 . + 0 ID=cds-PDP76598.1;Parent=gene-CLI76_08895;Dbxref=NCBI_GP:PDP76598.1;Name=PDP76598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584120.1;locus_tag=CLI76_08895;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=PDP76598.1;transl_table=11 NSLT01000051.1 Genbank gene 11490 12254 . + . ID=gene-CLI76_08900;Name=CLI76_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08900 NSLT01000051.1 Protein Homology CDS 11490 12254 . + 0 ID=cds-PDP76599.1;Parent=gene-CLI76_08900;Dbxref=NCBI_GP:PDP76599.1;Name=PDP76599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457988.1;locus_tag=CLI76_08900;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=PDP76599.1;transl_table=11 NSLT01000051.1 Genbank gene 12754 13950 . + . ID=gene-CLI76_08905;Name=CLI76_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08905 NSLT01000051.1 Protein Homology CDS 12754 13950 . + 0 ID=cds-PDP76600.1;Parent=gene-CLI76_08905;Dbxref=NCBI_GP:PDP76600.1;Name=PDP76600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584123.1;locus_tag=CLI76_08905;product=peptidase M24;protein_id=PDP76600.1;transl_table=11 NSLT01000051.1 Genbank gene 13986 15677 . + . ID=gene-CLI76_08910;Name=CLI76_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08910 NSLT01000051.1 Protein Homology CDS 13986 15677 . + 0 ID=cds-PDP76601.1;Parent=gene-CLI76_08910;Dbxref=NCBI_GP:PDP76601.1;Name=PDP76601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874233.1;locus_tag=CLI76_08910;product=alkaline phosphatase;protein_id=PDP76601.1;transl_table=11 ##sequence-region NSLT01000052.1 1 15830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000052.1 Genbank region 1 15830 . + . ID=NSLT01000052.1:1..15830;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000052.1 Genbank gene 884 2251 . - . ID=gene-CLI76_08915;Name=CLI76_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08915 NSLT01000052.1 Protein Homology CDS 884 2251 . - 0 ID=cds-PDP76576.1;Parent=gene-CLI76_08915;Dbxref=NCBI_GP:PDP76576.1;Name=PDP76576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815549.1;locus_tag=CLI76_08915;product=transporter;protein_id=PDP76576.1;transl_table=11 NSLT01000052.1 Genbank gene 2248 3354 . - . ID=gene-CLI76_08920;Name=CLI76_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08920 NSLT01000052.1 Protein Homology CDS 2248 3354 . - 0 ID=cds-PDP76577.1;Parent=gene-CLI76_08920;Dbxref=NCBI_GP:PDP76577.1;Name=PDP76577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583983.1;locus_tag=CLI76_08920;product=efflux transporter periplasmic adaptor subunit;protein_id=PDP76577.1;transl_table=11 NSLT01000052.1 Genbank gene 3424 4686 . - . ID=gene-CLI76_08925;Name=CLI76_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08925 NSLT01000052.1 Protein Homology CDS 3424 4686 . - 0 ID=cds-PDP76578.1;Parent=gene-CLI76_08925;Dbxref=NCBI_GP:PDP76578.1;Name=PDP76578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875125.1;locus_tag=CLI76_08925;product=ABC transporter permease;protein_id=PDP76578.1;transl_table=11 NSLT01000052.1 Genbank gene 4709 5983 . - . ID=gene-CLI76_08930;Name=CLI76_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08930 NSLT01000052.1 Protein Homology CDS 4709 5983 . - 0 ID=cds-PDP76579.1;Parent=gene-CLI76_08930;Dbxref=NCBI_GP:PDP76579.1;Name=PDP76579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457513.1;locus_tag=CLI76_08930;product=ABC transporter permease;protein_id=PDP76579.1;transl_table=11 NSLT01000052.1 Genbank gene 6008 6667 . - . ID=gene-CLI76_08935;Name=CLI76_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08935 NSLT01000052.1 Protein Homology CDS 6008 6667 . - 0 ID=cds-PDP76580.1;Parent=gene-CLI76_08935;Dbxref=NCBI_GP:PDP76580.1;Name=PDP76580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875129.1;locus_tag=CLI76_08935;product=ABC transporter ATP-binding protein;protein_id=PDP76580.1;transl_table=11 NSLT01000052.1 Genbank gene 6686 7093 . - . ID=gene-CLI76_08940;Name=CLI76_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08940 NSLT01000052.1 Protein Homology CDS 6686 7093 . - 0 ID=cds-PDP76581.1;Parent=gene-CLI76_08940;Dbxref=NCBI_GP:PDP76581.1;Name=PDP76581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815551.1;locus_tag=CLI76_08940;product=hypothetical protein;protein_id=PDP76581.1;transl_table=11 NSLT01000052.1 Genbank gene 7576 8100 . + . ID=gene-CLI76_08945;Name=CLI76_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08945 NSLT01000052.1 Protein Homology CDS 7576 8100 . + 0 ID=cds-PDP76582.1;Parent=gene-CLI76_08945;Dbxref=NCBI_GP:PDP76582.1;Name=PDP76582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457515.1;locus_tag=CLI76_08945;product=RNA polymerase subunit sigma-70;protein_id=PDP76582.1;transl_table=11 NSLT01000052.1 Genbank gene 8097 8489 . + . ID=gene-CLI76_08950;Name=CLI76_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08950 NSLT01000052.1 Protein Homology CDS 8097 8489 . + 0 ID=cds-PDP76583.1;Parent=gene-CLI76_08950;Dbxref=NCBI_GP:PDP76583.1;Name=PDP76583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583989.1;locus_tag=CLI76_08950;product=hypothetical protein;protein_id=PDP76583.1;transl_table=11 NSLT01000052.1 Genbank gene 8686 8940 . - . ID=gene-CLI76_08955;Name=CLI76_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08955 NSLT01000052.1 GeneMarkS+ CDS 8686 8940 . - 0 ID=cds-PDP76584.1;Parent=gene-CLI76_08955;Dbxref=NCBI_GP:PDP76584.1;Name=PDP76584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_08955;product=hypothetical protein;protein_id=PDP76584.1;transl_table=11 NSLT01000052.1 Genbank gene 9619 11766 . - . ID=gene-CLI76_08960;Name=CLI76_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08960 NSLT01000052.1 Protein Homology CDS 9619 11766 . - 0 ID=cds-PDP76585.1;Parent=gene-CLI76_08960;Dbxref=NCBI_GP:PDP76585.1;Name=PDP76585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006797728.1;locus_tag=CLI76_08960;product=methylmalonyl-CoA mutase;protein_id=PDP76585.1;transl_table=11 NSLT01000052.1 Genbank gene 11795 13651 . - . ID=gene-CLI76_08965;Name=mutA;gbkey=Gene;gene=mutA;gene_biotype=protein_coding;locus_tag=CLI76_08965 NSLT01000052.1 Protein Homology CDS 11795 13651 . - 0 ID=cds-PDP76586.1;Parent=gene-CLI76_08965;Dbxref=NCBI_GP:PDP76586.1;Name=PDP76586.1;gbkey=CDS;gene=mutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965140.1;locus_tag=CLI76_08965;product=methylmalonyl-CoA mutase small subunit;protein_id=PDP76586.1;transl_table=11 NSLT01000052.1 Genbank gene 13898 15424 . + . ID=gene-CLI76_08970;Name=CLI76_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08970 NSLT01000052.1 Protein Homology CDS 13898 15424 . + 0 ID=cds-PDP76587.1;Parent=gene-CLI76_08970;Dbxref=NCBI_GP:PDP76587.1;Name=PDP76587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585639.1;locus_tag=CLI76_08970;product=T9SS C-terminal target domain-containing protein;protein_id=PDP76587.1;transl_table=11 NSLT01000052.1 Genbank gene 15499 15807 . + . ID=gene-CLI76_08975;Name=CLI76_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08975 NSLT01000052.1 Protein Homology CDS 15499 15807 . + 0 ID=cds-PDP76588.1;Parent=gene-CLI76_08975;Dbxref=NCBI_GP:PDP76588.1;Name=PDP76588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874264.1;locus_tag=CLI76_08975;product=hypothetical protein;protein_id=PDP76588.1;transl_table=11 ##sequence-region NSLT01000053.1 1 15760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000053.1 Genbank region 1 15760 . + . ID=NSLT01000053.1:1..15760;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000053.1 Genbank gene 30 794 . + . ID=gene-CLI76_08980;Name=CLI76_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08980 NSLT01000053.1 Protein Homology CDS 30 794 . + 0 ID=cds-PDP76574.1;Parent=gene-CLI76_08980;Dbxref=NCBI_GP:PDP76574.1;Name=PDP76574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018668260.1;locus_tag=CLI76_08980;product=radical SAM protein;protein_id=PDP76574.1;transl_table=11 NSLT01000053.1 Genbank gene 791 1297 . + . ID=gene-CLI76_08985;Name=CLI76_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08985 NSLT01000053.1 GeneMarkS+ CDS 791 1297 . + 0 ID=cds-PDP76561.1;Parent=gene-CLI76_08985;Dbxref=NCBI_GP:PDP76561.1;Name=PDP76561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_08985;product=hypothetical protein;protein_id=PDP76561.1;transl_table=11 NSLT01000053.1 Genbank pseudogene 1294 1686 . + . ID=gene-CLI76_08990;Name=CLI76_08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_08990;pseudo=true NSLT01000053.1 Protein Homology CDS 1294 1686 . + 0 ID=cds-CLI76_08990;Parent=gene-CLI76_08990;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874555.1;locus_tag=CLI76_08990;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000053.1 Genbank gene 1864 2532 . + . ID=gene-CLI76_08995;Name=CLI76_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_08995 NSLT01000053.1 Protein Homology CDS 1864 2532 . + 0 ID=cds-PDP76562.1;Parent=gene-CLI76_08995;Dbxref=NCBI_GP:PDP76562.1;Name=PDP76562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874667.1;locus_tag=CLI76_08995;product=HAD family hydrolase;protein_id=PDP76562.1;transl_table=11 NSLT01000053.1 Genbank gene 3010 4092 . - . ID=gene-CLI76_09000;Name=CLI76_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09000 NSLT01000053.1 Protein Homology CDS 3010 4092 . - 0 ID=cds-PDP76563.1;Parent=gene-CLI76_09000;Dbxref=NCBI_GP:PDP76563.1;Name=PDP76563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815657.1;locus_tag=CLI76_09000;product=O-succinylbenzoic acid--CoA ligase;protein_id=PDP76563.1;transl_table=11 NSLT01000053.1 Genbank gene 4116 5186 . - . ID=gene-CLI76_09005;Name=CLI76_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09005 NSLT01000053.1 Protein Homology CDS 4116 5186 . - 0 ID=cds-PDP76564.1;Parent=gene-CLI76_09005;Dbxref=NCBI_GP:PDP76564.1;Name=PDP76564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815656.1;locus_tag=CLI76_09005;product=o-succinylbenzoate synthase;protein_id=PDP76564.1;transl_table=11 NSLT01000053.1 Genbank gene 5186 6010 . - . ID=gene-CLI76_09010;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CLI76_09010 NSLT01000053.1 Protein Homology CDS 5186 6010 . - 0 ID=cds-PDP76565.1;Parent=gene-CLI76_09010;Dbxref=NCBI_GP:PDP76565.1;Name=PDP76565.1;gbkey=CDS;gene=menB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815655.1;locus_tag=CLI76_09010;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=PDP76565.1;transl_table=11 NSLT01000053.1 Genbank gene 6029 7768 . - . ID=gene-CLI76_09015;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CLI76_09015 NSLT01000053.1 Protein Homology CDS 6029 7768 . - 0 ID=cds-PDP76575.1;Parent=gene-CLI76_09015;Dbxref=NCBI_GP:PDP76575.1;Name=PDP76575.1;gbkey=CDS;gene=menD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014225281.1;locus_tag=CLI76_09015;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=PDP76575.1;transl_table=11 NSLT01000053.1 Genbank gene 7768 8886 . - . ID=gene-CLI76_09020;Name=CLI76_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09020 NSLT01000053.1 Protein Homology CDS 7768 8886 . - 0 ID=cds-PDP76566.1;Parent=gene-CLI76_09020;Dbxref=NCBI_GP:PDP76566.1;Name=PDP76566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815653.1;locus_tag=CLI76_09020;product=isochorismate synthase;protein_id=PDP76566.1;transl_table=11 NSLT01000053.1 Genbank gene 8954 10381 . - . ID=gene-CLI76_09025;Name=CLI76_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09025 NSLT01000053.1 Protein Homology CDS 8954 10381 . - 0 ID=cds-PDP76567.1;Parent=gene-CLI76_09025;Dbxref=NCBI_GP:PDP76567.1;Name=PDP76567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226288.1;locus_tag=CLI76_09025;product=AAA family ATPase;protein_id=PDP76567.1;transl_table=11 NSLT01000053.1 Genbank gene 10569 10796 . - . ID=gene-CLI76_09030;Name=CLI76_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09030 NSLT01000053.1 Protein Homology CDS 10569 10796 . - 0 ID=cds-PDP76568.1;Parent=gene-CLI76_09030;Dbxref=NCBI_GP:PDP76568.1;Name=PDP76568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874658.1;locus_tag=CLI76_09030;product=DNA-binding protein;protein_id=PDP76568.1;transl_table=11 NSLT01000053.1 Genbank gene 10835 12160 . + . ID=gene-CLI76_09035;Name=CLI76_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09035 NSLT01000053.1 Protein Homology CDS 10835 12160 . + 0 ID=cds-PDP76569.1;Parent=gene-CLI76_09035;Dbxref=NCBI_GP:PDP76569.1;Name=PDP76569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874550.1;locus_tag=CLI76_09035;product=ATPase;protein_id=PDP76569.1;transl_table=11 NSLT01000053.1 Genbank gene 12217 12408 . - . ID=gene-CLI76_09040;Name=CLI76_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09040 NSLT01000053.1 Protein Homology CDS 12217 12408 . - 0 ID=cds-PDP76570.1;Parent=gene-CLI76_09040;Dbxref=NCBI_GP:PDP76570.1;Name=PDP76570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956331.1;locus_tag=CLI76_09040;product=DNA-binding protein;protein_id=PDP76570.1;transl_table=11 NSLT01000053.1 Genbank gene 12405 14453 . - . ID=gene-CLI76_09045;Name=CLI76_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09045 NSLT01000053.1 Protein Homology CDS 12405 14453 . - 0 ID=cds-PDP76571.1;Parent=gene-CLI76_09045;Dbxref=NCBI_GP:PDP76571.1;Name=PDP76571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815644.1;locus_tag=CLI76_09045;product=topoisomerase;protein_id=PDP76571.1;transl_table=11 NSLT01000053.1 Genbank gene 14450 14839 . - . ID=gene-CLI76_09050;Name=CLI76_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09050 NSLT01000053.1 Protein Homology CDS 14450 14839 . - 0 ID=cds-PDP76572.1;Parent=gene-CLI76_09050;Dbxref=NCBI_GP:PDP76572.1;Name=PDP76572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585374.1;locus_tag=CLI76_09050;product=DNA-binding protein;protein_id=PDP76572.1;transl_table=11 NSLT01000053.1 Genbank gene 14842 15183 . - . ID=gene-CLI76_09055;Name=CLI76_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09055 NSLT01000053.1 Protein Homology CDS 14842 15183 . - 0 ID=cds-PDP76573.1;Parent=gene-CLI76_09055;Dbxref=NCBI_GP:PDP76573.1;Name=PDP76573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457610.1;locus_tag=CLI76_09055;product=XRE family transcriptional regulator;protein_id=PDP76573.1;transl_table=11 NSLT01000053.1 Genbank pseudogene 15630 15728 . + . ID=gene-CLI76_09060;Name=CLI76_09060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09060;pseudo=true NSLT01000053.1 Protein Homology CDS 15630 15728 . + 0 ID=cds-CLI76_09060;Parent=gene-CLI76_09060;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_09060;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000054.1 1 15296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000054.1 Genbank region 1 15296 . + . ID=NSLT01000054.1:1..15296;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000054.1 Genbank gene 1 500 . + . ID=gene-CLI76_09065;Name=CLI76_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09065;partial=true;start_range=.,1 NSLT01000054.1 Protein Homology CDS 1 500 . + 2 ID=cds-PDP76548.1;Parent=gene-CLI76_09065;Dbxref=NCBI_GP:PDP76548.1;Name=PDP76548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_09065;partial=true;product=hypothetical protein;protein_id=PDP76548.1;start_range=.,1;transl_table=11 NSLT01000054.1 Genbank gene 745 821 . + . ID=gene-CLI76_09070;Name=CLI76_09070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_09070 NSLT01000054.1 tRNAscan-SE tRNA 745 821 . + . ID=rna-CLI76_09070;Parent=gene-CLI76_09070;anticodon=(pos:779..781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_09070;product=tRNA-Asp NSLT01000054.1 tRNAscan-SE exon 745 821 . + . ID=exon-CLI76_09070-1;Parent=rna-CLI76_09070;anticodon=(pos:779..781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_09070;product=tRNA-Asp NSLT01000054.1 Genbank gene 1045 2016 . + . ID=gene-CLI76_09075;Name=CLI76_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09075 NSLT01000054.1 Protein Homology CDS 1045 2016 . + 0 ID=cds-PDP76549.1;Parent=gene-CLI76_09075;Dbxref=NCBI_GP:PDP76549.1;Name=PDP76549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583663.1;locus_tag=CLI76_09075;product=methionyl-tRNA formyltransferase;protein_id=PDP76549.1;transl_table=11 NSLT01000054.1 Genbank gene 2181 4724 . + . ID=gene-CLI76_09080;Name=CLI76_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09080 NSLT01000054.1 Protein Homology CDS 2181 4724 . + 0 ID=cds-PDP76550.1;Parent=gene-CLI76_09080;Dbxref=NCBI_GP:PDP76550.1;Name=PDP76550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458651.1;locus_tag=CLI76_09080;product=hypothetical protein;protein_id=PDP76550.1;transl_table=11 NSLT01000054.1 Genbank gene 4728 6659 . + . ID=gene-CLI76_09085;Name=CLI76_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09085 NSLT01000054.1 Protein Homology CDS 4728 6659 . + 0 ID=cds-PDP76551.1;Parent=gene-CLI76_09085;Dbxref=NCBI_GP:PDP76551.1;Name=PDP76551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874862.1;locus_tag=CLI76_09085;product=arylsulfatase;protein_id=PDP76551.1;transl_table=11 NSLT01000054.1 Genbank gene 6992 7231 . + . ID=gene-CLI76_09090;Name=CLI76_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09090 NSLT01000054.1 Protein Homology CDS 6992 7231 . + 0 ID=cds-PDP76552.1;Parent=gene-CLI76_09090;Dbxref=NCBI_GP:PDP76552.1;Name=PDP76552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816245.1;locus_tag=CLI76_09090;product=hypothetical protein;protein_id=PDP76552.1;transl_table=11 NSLT01000054.1 Genbank gene 7307 7972 . + . ID=gene-CLI76_09095;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=CLI76_09095 NSLT01000054.1 Protein Homology CDS 7307 7972 . + 0 ID=cds-PDP76553.1;Parent=gene-CLI76_09095;Dbxref=NCBI_GP:PDP76553.1;Name=PDP76553.1;gbkey=CDS;gene=cas6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874856.1;locus_tag=CLI76_09095;product=CRISPR-associated endoribonuclease Cas6;protein_id=PDP76553.1;transl_table=11 NSLT01000054.1 Genbank gene 7979 8566 . + . ID=gene-CLI76_09100;Name=CLI76_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09100 NSLT01000054.1 Protein Homology CDS 7979 8566 . + 0 ID=cds-PDP76554.1;Parent=gene-CLI76_09100;Dbxref=NCBI_GP:PDP76554.1;Name=PDP76554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458648.1;locus_tag=CLI76_09100;product=hypothetical protein;protein_id=PDP76554.1;transl_table=11 NSLT01000054.1 Genbank gene 8583 10703 . + . ID=gene-CLI76_09105;Name=CLI76_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09105 NSLT01000054.1 Protein Homology CDS 8583 10703 . + 0 ID=cds-PDP76555.1;Parent=gene-CLI76_09105;Dbxref=NCBI_GP:PDP76555.1;Name=PDP76555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458647.1;locus_tag=CLI76_09105;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=PDP76555.1;transl_table=11 NSLT01000054.1 Genbank gene 10714 12009 . + . ID=gene-CLI76_09110;Name=CLI76_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09110 NSLT01000054.1 Protein Homology CDS 10714 12009 . + 0 ID=cds-PDP76556.1;Parent=gene-CLI76_09110;Dbxref=NCBI_GP:PDP76556.1;Name=PDP76556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458646.1;locus_tag=CLI76_09110;product=hypothetical protein;protein_id=PDP76556.1;transl_table=11 NSLT01000054.1 Genbank gene 12030 13088 . + . ID=gene-CLI76_09115;Name=CLI76_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09115 NSLT01000054.1 Protein Homology CDS 12030 13088 . + 0 ID=cds-PDP76557.1;Parent=gene-CLI76_09115;Dbxref=NCBI_GP:PDP76557.1;Name=PDP76557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458645.1;locus_tag=CLI76_09115;product=CRISPR-associated protein Cas7;protein_id=PDP76557.1;transl_table=11 NSLT01000054.1 Genbank gene 13205 13714 . + . ID=gene-CLI76_09120;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=CLI76_09120 NSLT01000054.1 Protein Homology CDS 13205 13714 . + 0 ID=cds-PDP76558.1;Parent=gene-CLI76_09120;Dbxref=NCBI_GP:PDP76558.1;Name=PDP76558.1;gbkey=CDS;gene=cas4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373512.1;locus_tag=CLI76_09120;product=CRISPR-associated protein Cas4;protein_id=PDP76558.1;transl_table=11 NSLT01000054.1 Genbank gene 13711 14727 . + . ID=gene-CLI76_09125;Name=CLI76_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09125 NSLT01000054.1 Protein Homology CDS 13711 14727 . + 0 ID=cds-PDP76559.1;Parent=gene-CLI76_09125;Dbxref=NCBI_GP:PDP76559.1;Name=PDP76559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874853.1;locus_tag=CLI76_09125;product=type I-B CRISPR-associated endonuclease Cas1;protein_id=PDP76559.1;transl_table=11 NSLT01000054.1 Genbank gene 14727 14990 . + . ID=gene-CLI76_09130;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=CLI76_09130 NSLT01000054.1 Protein Homology CDS 14727 14990 . + 0 ID=cds-PDP76560.1;Parent=gene-CLI76_09130;Dbxref=NCBI_GP:PDP76560.1;Name=PDP76560.1;gbkey=CDS;gene=cas2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964772.1;locus_tag=CLI76_09130;product=CRISPR-associated endonuclease Cas2;protein_id=PDP76560.1;transl_table=11 ##sequence-region NSLT01000055.1 1 15153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000055.1 Genbank region 1 15153 . + . ID=NSLT01000055.1:1..15153;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000055.1 Genbank gene 1 444 . + . ID=gene-CLI76_09135;Name=CLI76_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09135;partial=true;start_range=.,1 NSLT01000055.1 Protein Homology CDS 1 444 . + 0 ID=cds-PDP76532.1;Parent=gene-CLI76_09135;Dbxref=NCBI_GP:PDP76532.1;Name=PDP76532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_09135;partial=true;product=IS982 family transposase;protein_id=PDP76532.1;start_range=.,1;transl_table=11 NSLT01000055.1 Genbank gene 618 923 . + . ID=gene-CLI76_09140;Name=CLI76_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09140 NSLT01000055.1 Protein Homology CDS 618 923 . + 0 ID=cds-PDP76533.1;Parent=gene-CLI76_09140;Dbxref=NCBI_GP:PDP76533.1;Name=PDP76533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956439.1;locus_tag=CLI76_09140;product=hypothetical protein;protein_id=PDP76533.1;transl_table=11 NSLT01000055.1 Genbank gene 1134 3125 . + . ID=gene-CLI76_09145;Name=CLI76_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09145 NSLT01000055.1 Protein Homology CDS 1134 3125 . + 0 ID=cds-PDP76534.1;Parent=gene-CLI76_09145;Dbxref=NCBI_GP:PDP76534.1;Name=PDP76534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874003.1;locus_tag=CLI76_09145;product=DUF4954 domain-containing protein;protein_id=PDP76534.1;transl_table=11 NSLT01000055.1 Genbank gene 3208 3927 . + . ID=gene-CLI76_09150;Name=CLI76_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09150 NSLT01000055.1 Protein Homology CDS 3208 3927 . + 0 ID=cds-PDP76535.1;Parent=gene-CLI76_09150;Dbxref=NCBI_GP:PDP76535.1;Name=PDP76535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583568.1;locus_tag=CLI76_09150;product=UMP kinase;protein_id=PDP76535.1;transl_table=11 NSLT01000055.1 Genbank gene 3964 4524 . + . ID=gene-CLI76_09155;Name=CLI76_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09155 NSLT01000055.1 Protein Homology CDS 3964 4524 . + 0 ID=cds-PDP76536.1;Parent=gene-CLI76_09155;Dbxref=NCBI_GP:PDP76536.1;Name=PDP76536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583567.1;locus_tag=CLI76_09155;product=ribosome-recycling factor;protein_id=PDP76536.1;transl_table=11 NSLT01000055.1 Genbank gene 4609 5556 . + . ID=gene-CLI76_09160;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CLI76_09160 NSLT01000055.1 Protein Homology CDS 4609 5556 . + 0 ID=cds-PDP76537.1;Parent=gene-CLI76_09160;Dbxref=NCBI_GP:PDP76537.1;Name=PDP76537.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874007.1;locus_tag=CLI76_09160;product=ribosome small subunit-dependent GTPase A;protein_id=PDP76537.1;transl_table=11 NSLT01000055.1 cmsearch riboswitch 5589 5702 . + . ID=id-NSLT01000055.1:5589..5702;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000055.1 Genbank gene 5779 8016 . + . ID=gene-CLI76_09165;Name=CLI76_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09165 NSLT01000055.1 Protein Homology CDS 5779 8016 . + 0 ID=cds-PDP76546.1;Parent=gene-CLI76_09165;Dbxref=NCBI_GP:PDP76546.1;Name=PDP76546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874008.1;locus_tag=CLI76_09165;product=TonB-dependent receptor;protein_id=PDP76546.1;transl_table=11 NSLT01000055.1 Genbank gene 8021 8629 . + . ID=gene-CLI76_09170;Name=CLI76_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09170 NSLT01000055.1 Protein Homology CDS 8021 8629 . + 0 ID=cds-PDP76538.1;Parent=gene-CLI76_09170;Dbxref=NCBI_GP:PDP76538.1;Name=PDP76538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965727.1;locus_tag=CLI76_09170;product=nicotinamide riboside transporter PnuC;protein_id=PDP76538.1;transl_table=11 NSLT01000055.1 Genbank gene 8626 9303 . + . ID=gene-CLI76_09175;Name=CLI76_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09175 NSLT01000055.1 Protein Homology CDS 8626 9303 . + 0 ID=cds-PDP76539.1;Parent=gene-CLI76_09175;Dbxref=NCBI_GP:PDP76539.1;Name=PDP76539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583563.1;locus_tag=CLI76_09175;product=thiamine diphosphokinase;protein_id=PDP76539.1;transl_table=11 NSLT01000055.1 Genbank gene 9431 10720 . - . ID=gene-CLI76_09180;Name=CLI76_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09180 NSLT01000055.1 Protein Homology CDS 9431 10720 . - 0 ID=cds-PDP76540.1;Parent=gene-CLI76_09180;Dbxref=NCBI_GP:PDP76540.1;Name=PDP76540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815220.1;locus_tag=CLI76_09180;product=methionine adenosyltransferase;protein_id=PDP76540.1;transl_table=11 NSLT01000055.1 Genbank gene 11143 11844 . - . ID=gene-CLI76_09185;Name=CLI76_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09185 NSLT01000055.1 Protein Homology CDS 11143 11844 . - 0 ID=cds-PDP76541.1;Parent=gene-CLI76_09185;Dbxref=NCBI_GP:PDP76541.1;Name=PDP76541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873997.1;locus_tag=CLI76_09185;product=hypothetical protein;protein_id=PDP76541.1;transl_table=11 NSLT01000055.1 Genbank gene 11965 12444 . - . ID=gene-CLI76_09190;Name=CLI76_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09190 NSLT01000055.1 Protein Homology CDS 11965 12444 . - 0 ID=cds-PDP76542.1;Parent=gene-CLI76_09190;Dbxref=NCBI_GP:PDP76542.1;Name=PDP76542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583560.1;locus_tag=CLI76_09190;product=hypothetical protein;protein_id=PDP76542.1;transl_table=11 NSLT01000055.1 Genbank gene 12540 13082 . - . ID=gene-CLI76_09195;Name=CLI76_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09195 NSLT01000055.1 Protein Homology CDS 12540 13082 . - 0 ID=cds-PDP76543.1;Parent=gene-CLI76_09195;Dbxref=NCBI_GP:PDP76543.1;Name=PDP76543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966129.1;locus_tag=CLI76_09195;product=hypothetical protein;protein_id=PDP76543.1;transl_table=11 NSLT01000055.1 Genbank gene 13376 13771 . - . ID=gene-CLI76_09200;Name=CLI76_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09200 NSLT01000055.1 Protein Homology CDS 13376 13771 . - 0 ID=cds-PDP76544.1;Parent=gene-CLI76_09200;Dbxref=NCBI_GP:PDP76544.1;Name=PDP76544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815213.1;locus_tag=CLI76_09200;product=hypothetical protein;protein_id=PDP76544.1;transl_table=11 NSLT01000055.1 Genbank gene 14310 14726 . - . ID=gene-CLI76_09205;Name=CLI76_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09205 NSLT01000055.1 GeneMarkS+ CDS 14310 14726 . - 0 ID=cds-PDP76545.1;Parent=gene-CLI76_09205;Dbxref=NCBI_GP:PDP76545.1;Name=PDP76545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09205;product=hypothetical protein;protein_id=PDP76545.1;transl_table=11 NSLT01000055.1 Genbank gene 14781 15153 . + . ID=gene-CLI76_09210;Name=CLI76_09210;end_range=15153,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09210;partial=true NSLT01000055.1 Protein Homology CDS 14781 15153 . + 0 ID=cds-PDP76547.1;Parent=gene-CLI76_09210;Dbxref=NCBI_GP:PDP76547.1;Name=PDP76547.1;end_range=15153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09210;partial=true;product=IS3 family transposase;protein_id=PDP76547.1;transl_table=11 ##sequence-region NSLT01000056.1 1 14549 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000056.1 Genbank region 1 14549 . + . ID=NSLT01000056.1:1..14549;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000056.1 Genbank gene 1 848 . - . ID=gene-CLI76_09215;Name=CLI76_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09215;partial=true;start_range=.,1 NSLT01000056.1 Protein Homology CDS 1 848 . - 0 ID=cds-PDP76529.1;Parent=gene-CLI76_09215;Dbxref=NCBI_GP:PDP76529.1;Name=PDP76529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_09215;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76529.1;start_range=.,1;transl_table=11 NSLT01000056.1 Genbank gene 1122 3944 . + . ID=gene-CLI76_09220;Name=CLI76_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09220 NSLT01000056.1 Protein Homology CDS 1122 3944 . + 0 ID=cds-PDP76523.1;Parent=gene-CLI76_09220;Dbxref=NCBI_GP:PDP76523.1;Name=PDP76523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956068.1;locus_tag=CLI76_09220;product=peptidase;protein_id=PDP76523.1;transl_table=11 NSLT01000056.1 Genbank gene 4028 4210 . - . ID=gene-CLI76_09225;Name=CLI76_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09225 NSLT01000056.1 Protein Homology CDS 4028 4210 . - 0 ID=cds-PDP76524.1;Parent=gene-CLI76_09225;Dbxref=NCBI_GP:PDP76524.1;Name=PDP76524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815466.1;locus_tag=CLI76_09225;product=hypothetical protein;protein_id=PDP76524.1;transl_table=11 NSLT01000056.1 Genbank pseudogene 4571 4831 . - . ID=gene-CLI76_09230;Name=CLI76_09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09230;pseudo=true NSLT01000056.1 Protein Homology CDS 4571 4831 . - 0 ID=cds-CLI76_09230;Parent=gene-CLI76_09230;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816310.1;locus_tag=CLI76_09230;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000056.1 Genbank gene 5081 8662 . - . ID=gene-CLI76_09235;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CLI76_09235 NSLT01000056.1 Protein Homology CDS 5081 8662 . - 0 ID=cds-PDP76525.1;Parent=gene-CLI76_09235;Dbxref=NCBI_GP:PDP76525.1;Name=PDP76525.1;gbkey=CDS;gene=nifJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873434.1;locus_tag=CLI76_09235;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=PDP76525.1;transl_table=11 NSLT01000056.1 Genbank gene 8851 10032 . - . ID=gene-CLI76_09240;Name=CLI76_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09240 NSLT01000056.1 Protein Homology CDS 8851 10032 . - 0 ID=cds-PDP76526.1;Parent=gene-CLI76_09240;Dbxref=NCBI_GP:PDP76526.1;Name=PDP76526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585089.1;locus_tag=CLI76_09240;product=AAA family ATPase;protein_id=PDP76526.1;transl_table=11 NSLT01000056.1 Genbank pseudogene 10331 10619 . + . ID=gene-CLI76_09245;Name=CLI76_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09245;pseudo=true NSLT01000056.1 Protein Homology CDS 10331 10619 . + 0 ID=cds-CLI76_09245;Parent=gene-CLI76_09245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585029.1;locus_tag=CLI76_09245;product=DNA-binding protein;pseudo=true;transl_table=11 NSLT01000056.1 Genbank gene 10856 11329 . + . ID=gene-CLI76_09250;Name=CLI76_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09250 NSLT01000056.1 Protein Homology CDS 10856 11329 . + 0 ID=cds-PDP76527.1;Parent=gene-CLI76_09250;Dbxref=NCBI_GP:PDP76527.1;Name=PDP76527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875012.1;locus_tag=CLI76_09250;product=histidinol phosphate phosphatase;protein_id=PDP76527.1;transl_table=11 NSLT01000056.1 Genbank gene 11412 12179 . + . ID=gene-CLI76_09255;Name=CLI76_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09255 NSLT01000056.1 Protein Homology CDS 11412 12179 . + 0 ID=cds-PDP76530.1;Parent=gene-CLI76_09255;Dbxref=NCBI_GP:PDP76530.1;Name=PDP76530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359405.1;locus_tag=CLI76_09255;product=hypothetical protein;protein_id=PDP76530.1;transl_table=11 NSLT01000056.1 Genbank gene 12266 13135 . + . ID=gene-CLI76_09260;Name=CLI76_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09260 NSLT01000056.1 Protein Homology CDS 12266 13135 . + 0 ID=cds-PDP76528.1;Parent=gene-CLI76_09260;Dbxref=NCBI_GP:PDP76528.1;Name=PDP76528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015546407.1;locus_tag=CLI76_09260;product=DNA damage-inducible protein D;protein_id=PDP76528.1;transl_table=11 NSLT01000056.1 Genbank pseudogene 13153 13688 . + . ID=gene-CLI76_09265;Name=CLI76_09265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09265;pseudo=true NSLT01000056.1 Protein Homology CDS 13153 13688 . + 0 ID=cds-CLI76_09265;Parent=gene-CLI76_09265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226317.1;locus_tag=CLI76_09265;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000056.1 Genbank pseudogene 13654 14219 . + . ID=gene-CLI76_09270;Name=CLI76_09270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09270;pseudo=true NSLT01000056.1 Protein Homology CDS 13654 14219 . + 0 ID=cds-CLI76_09270;Parent=gene-CLI76_09270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005847497.1;locus_tag=CLI76_09270;product=glutamine amidotransferase;pseudo=true;transl_table=11 NSLT01000056.1 Genbank pseudogene 14203 14406 . - . ID=gene-CLI76_09275;Name=CLI76_09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09275;pseudo=true NSLT01000056.1 Protein Homology CDS 14203 14406 . - 0 ID=cds-CLI76_09275;Parent=gene-CLI76_09275;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585360.1;locus_tag=CLI76_09275;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000056.1 Genbank gene 14436 14549 . - . ID=gene-CLI76_09280;Name=CLI76_09280;end_range=14549,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09280;partial=true NSLT01000056.1 Protein Homology CDS 14436 14549 . - 0 ID=cds-PDP76531.1;Parent=gene-CLI76_09280;Dbxref=NCBI_GP:PDP76531.1;Name=PDP76531.1;end_range=14549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_09280;partial=true;product=IS982 family transposase;protein_id=PDP76531.1;transl_table=11 ##sequence-region NSLT01000057.1 1 13039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000057.1 Genbank region 1 13039 . + . ID=NSLT01000057.1:1..13039;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000057.1 Genbank gene 1 197 . + . ID=gene-CLI76_09285;Name=CLI76_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09285;partial=true;start_range=.,1 NSLT01000057.1 Protein Homology CDS 1 197 . + 2 ID=cds-PDP76511.1;Parent=gene-CLI76_09285;Dbxref=NCBI_GP:PDP76511.1;Name=PDP76511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457647.1;locus_tag=CLI76_09285;partial=true;product=histidinol phosphate aminotransferase;protein_id=PDP76511.1;start_range=.,1;transl_table=11 NSLT01000057.1 Genbank gene 489 1355 . + . ID=gene-CLI76_09290;Name=CLI76_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09290 NSLT01000057.1 Protein Homology CDS 489 1355 . + 0 ID=cds-PDP76512.1;Parent=gene-CLI76_09290;Dbxref=NCBI_GP:PDP76512.1;Name=PDP76512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956074.1;locus_tag=CLI76_09290;product=hypothetical protein;protein_id=PDP76512.1;transl_table=11 NSLT01000057.1 Genbank pseudogene 1516 1715 . + . ID=gene-CLI76_09295;Name=CLI76_09295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09295;pseudo=true NSLT01000057.1 Protein Homology CDS 1516 1715 . + 0 ID=cds-CLI76_09295;Parent=gene-CLI76_09295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874027.1;locus_tag=CLI76_09295;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000057.1 Genbank pseudogene 1693 2200 . + . ID=gene-CLI76_09300;Name=CLI76_09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09300;pseudo=true NSLT01000057.1 Protein Homology CDS 1693 2200 . + 0 ID=cds-CLI76_09300;Parent=gene-CLI76_09300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956073.1;locus_tag=CLI76_09300;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000057.1 Genbank gene 2187 3863 . - . ID=gene-CLI76_09305;Name=CLI76_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09305 NSLT01000057.1 Protein Homology CDS 2187 3863 . - 0 ID=cds-PDP76513.1;Parent=gene-CLI76_09305;Dbxref=NCBI_GP:PDP76513.1;Name=PDP76513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585108.1;locus_tag=CLI76_09305;product=transporter;protein_id=PDP76513.1;transl_table=11 NSLT01000057.1 Genbank gene 4080 5435 . + . ID=gene-CLI76_09310;Name=CLI76_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09310 NSLT01000057.1 Protein Homology CDS 4080 5435 . + 0 ID=cds-PDP76514.1;Parent=gene-CLI76_09310;Dbxref=NCBI_GP:PDP76514.1;Name=PDP76514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458249.1;locus_tag=CLI76_09310;product=peptidase M20;protein_id=PDP76514.1;transl_table=11 NSLT01000057.1 Genbank gene 5510 6784 . + . ID=gene-CLI76_09315;Name=CLI76_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09315 NSLT01000057.1 Protein Homology CDS 5510 6784 . + 0 ID=cds-PDP76515.1;Parent=gene-CLI76_09315;Dbxref=NCBI_GP:PDP76515.1;Name=PDP76515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874032.1;locus_tag=CLI76_09315;product=chlorohydrolase;protein_id=PDP76515.1;transl_table=11 NSLT01000057.1 Genbank gene 6804 7625 . + . ID=gene-CLI76_09320;Name=CLI76_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09320 NSLT01000057.1 Protein Homology CDS 6804 7625 . + 0 ID=cds-PDP76516.1;Parent=gene-CLI76_09320;Dbxref=NCBI_GP:PDP76516.1;Name=PDP76516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965906.1;locus_tag=CLI76_09320;product=purine-nucleoside phosphorylase;protein_id=PDP76516.1;transl_table=11 NSLT01000057.1 Genbank pseudogene 8146 8454 . - . ID=gene-CLI76_09325;Name=CLI76_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09325;pseudo=true NSLT01000057.1 Protein Homology CDS 8146 8454 . - 0 ID=cds-CLI76_09325;Parent=gene-CLI76_09325;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874037.1;locus_tag=CLI76_09325;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000057.1 Genbank gene 8506 9000 . - . ID=gene-CLI76_09330;Name=CLI76_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09330 NSLT01000057.1 Protein Homology CDS 8506 9000 . - 0 ID=cds-PDP76521.1;Parent=gene-CLI76_09330;Dbxref=NCBI_GP:PDP76521.1;Name=PDP76521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965912.1;locus_tag=CLI76_09330;product=hypothetical protein;protein_id=PDP76521.1;transl_table=11 NSLT01000057.1 Genbank gene 9721 10239 . + . ID=gene-CLI76_09335;Name=CLI76_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09335 NSLT01000057.1 Protein Homology CDS 9721 10239 . + 0 ID=cds-PDP76517.1;Parent=gene-CLI76_09335;Dbxref=NCBI_GP:PDP76517.1;Name=PDP76517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816316.1;locus_tag=CLI76_09335;product=histidinol phosphate phosphatase;protein_id=PDP76517.1;transl_table=11 NSLT01000057.1 Genbank gene 10597 10701 . - . ID=gene-CLI76_09340;Name=CLI76_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09340 NSLT01000057.1 Protein Homology CDS 10597 10701 . - 0 ID=cds-PDP76522.1;Parent=gene-CLI76_09340;Dbxref=NCBI_GP:PDP76522.1;Name=PDP76522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_09340;product=DNA methylase;protein_id=PDP76522.1;transl_table=11 NSLT01000057.1 Genbank gene 10751 11836 . - . ID=gene-CLI76_09345;Name=CLI76_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09345 NSLT01000057.1 Protein Homology CDS 10751 11836 . - 0 ID=cds-PDP76518.1;Parent=gene-CLI76_09345;Dbxref=NCBI_GP:PDP76518.1;Name=PDP76518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_09345;product=IS5/IS1182 family transposase;protein_id=PDP76518.1;transl_table=11 NSLT01000057.1 Genbank gene 11941 12120 . - . ID=gene-CLI76_09350;Name=CLI76_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09350 NSLT01000057.1 Protein Homology CDS 11941 12120 . - 0 ID=cds-PDP76519.1;Parent=gene-CLI76_09350;Dbxref=NCBI_GP:PDP76519.1;Name=PDP76519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_09350;product=hypothetical protein;protein_id=PDP76519.1;transl_table=11 NSLT01000057.1 Genbank gene 12250 13039 . - . ID=gene-CLI76_09355;Name=CLI76_09355;end_range=13039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09355;partial=true NSLT01000057.1 Protein Homology CDS 12250 13039 . - 1 ID=cds-PDP76520.1;Parent=gene-CLI76_09355;Dbxref=NCBI_GP:PDP76520.1;Name=PDP76520.1;end_range=13039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09355;partial=true;product=IS3 family transposase;protein_id=PDP76520.1;transl_table=11 ##sequence-region NSLT01000058.1 1 12982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000058.1 Genbank region 1 12982 . + . ID=NSLT01000058.1:1..12982;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000058.1 Genbank gene 587 967 . - . ID=gene-CLI76_09360;Name=CLI76_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09360 NSLT01000058.1 Protein Homology CDS 587 967 . - 0 ID=cds-PDP76498.1;Parent=gene-CLI76_09360;Dbxref=NCBI_GP:PDP76498.1;Name=PDP76498.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583512.1;locus_tag=CLI76_09360;product=RidA family protein;protein_id=PDP76498.1;transl_table=11 NSLT01000058.1 Genbank gene 993 1742 . - . ID=gene-CLI76_09365;Name=CLI76_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09365 NSLT01000058.1 Protein Homology CDS 993 1742 . - 0 ID=cds-PDP76499.1;Parent=gene-CLI76_09365;Dbxref=NCBI_GP:PDP76499.1;Name=PDP76499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815176.1;locus_tag=CLI76_09365;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=PDP76499.1;transl_table=11 NSLT01000058.1 Genbank gene 1739 3394 . - . ID=gene-CLI76_09370;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CLI76_09370 NSLT01000058.1 Protein Homology CDS 1739 3394 . - 0 ID=cds-PDP76500.1;Parent=gene-CLI76_09370;Dbxref=NCBI_GP:PDP76500.1;Name=PDP76500.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964535.1;locus_tag=CLI76_09370;product=DNA repair protein RecN;protein_id=PDP76500.1;transl_table=11 NSLT01000058.1 Genbank gene 3409 4317 . - . ID=gene-CLI76_09375;Name=CLI76_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09375 NSLT01000058.1 Protein Homology CDS 3409 4317 . - 0 ID=cds-PDP76501.1;Parent=gene-CLI76_09375;Dbxref=NCBI_GP:PDP76501.1;Name=PDP76501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583515.1;locus_tag=CLI76_09375;product=DUF4835 domain-containing protein;protein_id=PDP76501.1;transl_table=11 NSLT01000058.1 Genbank gene 4314 5528 . - . ID=gene-CLI76_09380;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CLI76_09380 NSLT01000058.1 Protein Homology CDS 4314 5528 . - 0 ID=cds-PDP76502.1;Parent=gene-CLI76_09380;Dbxref=NCBI_GP:PDP76502.1;Name=PDP76502.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583516.1;locus_tag=CLI76_09380;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=PDP76502.1;transl_table=11 NSLT01000058.1 Genbank gene 5554 6333 . - . ID=gene-CLI76_09385;Name=CLI76_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09385 NSLT01000058.1 Protein Homology CDS 5554 6333 . - 0 ID=cds-PDP76503.1;Parent=gene-CLI76_09385;Dbxref=NCBI_GP:PDP76503.1;Name=PDP76503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583517.1;locus_tag=CLI76_09385;product=3'-5' exonuclease;protein_id=PDP76503.1;transl_table=11 NSLT01000058.1 Genbank gene 6346 7479 . - . ID=gene-CLI76_09390;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CLI76_09390 NSLT01000058.1 Protein Homology CDS 6346 7479 . - 0 ID=cds-PDP76504.1;Parent=gene-CLI76_09390;Dbxref=NCBI_GP:PDP76504.1;Name=PDP76504.1;gbkey=CDS;gene=dnaN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874340.1;locus_tag=CLI76_09390;product=DNA polymerase III subunit beta;protein_id=PDP76504.1;transl_table=11 NSLT01000058.1 Genbank gene 7840 8397 . - . ID=gene-CLI76_09395;Name=CLI76_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09395 NSLT01000058.1 Protein Homology CDS 7840 8397 . - 0 ID=cds-PDP76505.1;Parent=gene-CLI76_09395;Dbxref=NCBI_GP:PDP76505.1;Name=PDP76505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815182.1;locus_tag=CLI76_09395;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=PDP76505.1;transl_table=11 NSLT01000058.1 Genbank gene 8357 9991 . - . ID=gene-CLI76_09400;Name=CLI76_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09400 NSLT01000058.1 Protein Homology CDS 8357 9991 . - 0 ID=cds-PDP76506.1;Parent=gene-CLI76_09400;Dbxref=NCBI_GP:PDP76506.1;Name=PDP76506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815183.1;locus_tag=CLI76_09400;product=peptidase S41;protein_id=PDP76506.1;transl_table=11 NSLT01000058.1 Genbank gene 9999 10454 . - . ID=gene-CLI76_09405;Name=CLI76_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09405 NSLT01000058.1 Protein Homology CDS 9999 10454 . - 0 ID=cds-PDP76507.1;Parent=gene-CLI76_09405;Dbxref=NCBI_GP:PDP76507.1;Name=PDP76507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956425.1;locus_tag=CLI76_09405;product=CMP deaminase;protein_id=PDP76507.1;transl_table=11 NSLT01000058.1 Genbank gene 10535 10888 . - . ID=gene-CLI76_09410;Name=CLI76_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09410 NSLT01000058.1 Protein Homology CDS 10535 10888 . - 0 ID=cds-PDP76508.1;Parent=gene-CLI76_09410;Dbxref=NCBI_GP:PDP76508.1;Name=PDP76508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964527.1;locus_tag=CLI76_09410;product=DUF2023 domain-containing protein;protein_id=PDP76508.1;transl_table=11 NSLT01000058.1 Genbank gene 11053 11550 . - . ID=gene-CLI76_09415;Name=CLI76_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09415 NSLT01000058.1 Protein Homology CDS 11053 11550 . - 0 ID=cds-PDP76509.1;Parent=gene-CLI76_09415;Dbxref=NCBI_GP:PDP76509.1;Name=PDP76509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583523.1;locus_tag=CLI76_09415;product=flavodoxin;protein_id=PDP76509.1;transl_table=11 NSLT01000058.1 Genbank gene 11689 12849 . - . ID=gene-CLI76_09420;Name=CLI76_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09420 NSLT01000058.1 Protein Homology CDS 11689 12849 . - 0 ID=cds-PDP76510.1;Parent=gene-CLI76_09420;Dbxref=NCBI_GP:PDP76510.1;Name=PDP76510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008158295.1;locus_tag=CLI76_09420;product=glycerate kinase;protein_id=PDP76510.1;transl_table=11 ##sequence-region NSLT01000059.1 1 12904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000059.1 Genbank region 1 12904 . + . ID=NSLT01000059.1:1..12904;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000059.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_09425;Name=CLI76_09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09425;pseudo=true NSLT01000059.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_09425;Parent=gene-CLI76_09425;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09425;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000059.1 Genbank gene 1418 1807 . - . ID=gene-CLI76_09430;Name=CLI76_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09430 NSLT01000059.1 Protein Homology CDS 1418 1807 . - 0 ID=cds-PDP76489.1;Parent=gene-CLI76_09430;Dbxref=NCBI_GP:PDP76489.1;Name=PDP76489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873501.1;locus_tag=CLI76_09430;product=HIT family protein;protein_id=PDP76489.1;transl_table=11 NSLT01000059.1 Genbank gene 1822 2292 . - . ID=gene-CLI76_09435;Name=CLI76_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09435 NSLT01000059.1 Protein Homology CDS 1822 2292 . - 0 ID=cds-PDP76496.1;Parent=gene-CLI76_09435;Dbxref=NCBI_GP:PDP76496.1;Name=PDP76496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147156.1;locus_tag=CLI76_09435;product=transcription elongation factor GreA;protein_id=PDP76496.1;transl_table=11 NSLT01000059.1 Genbank gene 2776 3378 . - . ID=gene-CLI76_09440;Name=CLI76_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09440 NSLT01000059.1 Protein Homology CDS 2776 3378 . - 0 ID=cds-PDP76490.1;Parent=gene-CLI76_09440;Dbxref=NCBI_GP:PDP76490.1;Name=PDP76490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583963.1;locus_tag=CLI76_09440;product=threonylcarbamoyl-AMP synthase;protein_id=PDP76490.1;transl_table=11 NSLT01000059.1 Genbank gene 3385 4089 . - . ID=gene-CLI76_09445;Name=CLI76_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09445 NSLT01000059.1 Protein Homology CDS 3385 4089 . - 0 ID=cds-PDP76491.1;Parent=gene-CLI76_09445;Dbxref=NCBI_GP:PDP76491.1;Name=PDP76491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965998.1;locus_tag=CLI76_09445;product=DNA-binding protein;protein_id=PDP76491.1;transl_table=11 NSLT01000059.1 Genbank gene 4119 4778 . - . ID=gene-CLI76_09450;Name=CLI76_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09450 NSLT01000059.1 Protein Homology CDS 4119 4778 . - 0 ID=cds-PDP76492.1;Parent=gene-CLI76_09450;Dbxref=NCBI_GP:PDP76492.1;Name=PDP76492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873487.1;locus_tag=CLI76_09450;product=ABC transporter ATP-binding protein;protein_id=PDP76492.1;transl_table=11 NSLT01000059.1 Genbank gene 4775 5524 . - . ID=gene-CLI76_09455;Name=CLI76_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09455 NSLT01000059.1 Protein Homology CDS 4775 5524 . - 0 ID=cds-PDP76493.1;Parent=gene-CLI76_09455;Dbxref=NCBI_GP:PDP76493.1;Name=PDP76493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965996.1;locus_tag=CLI76_09455;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=PDP76493.1;transl_table=11 NSLT01000059.1 Genbank gene 5521 6615 . - . ID=gene-CLI76_09460;Name=CLI76_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09460 NSLT01000059.1 Protein Homology CDS 5521 6615 . - 0 ID=cds-PDP76494.1;Parent=gene-CLI76_09460;Dbxref=NCBI_GP:PDP76494.1;Name=PDP76494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956372.1;locus_tag=CLI76_09460;product=aminodeoxychorismate lyase;protein_id=PDP76494.1;transl_table=11 NSLT01000059.1 Genbank gene 7674 8687 . + . ID=gene-CLI76_09465;Name=CLI76_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09465 NSLT01000059.1 Protein Homology CDS 7674 8687 . + 0 ID=cds-PDP76497.1;Parent=gene-CLI76_09465;Dbxref=NCBI_GP:PDP76497.1;Name=PDP76497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873496.1;locus_tag=CLI76_09465;product=restriction endonuclease subunit M;protein_id=PDP76497.1;transl_table=11 NSLT01000059.1 Genbank gene 8697 12650 . + . ID=gene-CLI76_09470;Name=CLI76_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09470 NSLT01000059.1 Protein Homology CDS 8697 12650 . + 0 ID=cds-PDP76495.1;Parent=gene-CLI76_09470;Dbxref=NCBI_GP:PDP76495.1;Name=PDP76495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815528.1;locus_tag=CLI76_09470;product=DEAD/DEAH box helicase;protein_id=PDP76495.1;transl_table=11 ##sequence-region NSLT01000005.1 1 72604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000005.1 Genbank region 1 72604 . + . ID=NSLT01000005.1:1..72604;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000005.1 Genbank pseudogene 63 586 . + . ID=gene-CLI76_01620;Name=CLI76_01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01620;pseudo=true NSLT01000005.1 Protein Homology CDS 63 586 . + 0 ID=cds-CLI76_01620;Parent=gene-CLI76_01620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226350.1;locus_tag=CLI76_01620;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000005.1 Genbank pseudogene 634 738 . + . ID=gene-CLI76_01625;Name=CLI76_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01625;pseudo=true NSLT01000005.1 Protein Homology CDS 634 738 . + 0 ID=cds-CLI76_01625;Parent=gene-CLI76_01625;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956163.1;locus_tag=CLI76_01625;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 804 2471 . - . ID=gene-CLI76_01630;Name=CLI76_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01630 NSLT01000005.1 Protein Homology CDS 804 2471 . - 0 ID=cds-PDP77862.1;Parent=gene-CLI76_01630;Dbxref=NCBI_GP:PDP77862.1;Name=PDP77862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585540.1;locus_tag=CLI76_01630;product=formate--tetrahydrofolate ligase;protein_id=PDP77862.1;transl_table=11 NSLT01000005.1 Genbank gene 2628 3962 . + . ID=gene-CLI76_01635;Name=CLI76_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01635 NSLT01000005.1 Protein Homology CDS 2628 3962 . + 0 ID=cds-PDP77863.1;Parent=gene-CLI76_01635;Dbxref=NCBI_GP:PDP77863.1;Name=PDP77863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965524.1;locus_tag=CLI76_01635;product=ribonuclease;protein_id=PDP77863.1;transl_table=11 NSLT01000005.1 Genbank gene 4010 4579 . - . ID=gene-CLI76_01640;Name=CLI76_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01640 NSLT01000005.1 Protein Homology CDS 4010 4579 . - 0 ID=cds-PDP77864.1;Parent=gene-CLI76_01640;Dbxref=NCBI_GP:PDP77864.1;Name=PDP77864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458038.1;locus_tag=CLI76_01640;product=crossover junction endodeoxyribonuclease RuvC;protein_id=PDP77864.1;transl_table=11 NSLT01000005.1 Genbank gene 4587 4895 . - . ID=gene-CLI76_01645;Name=CLI76_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01645 NSLT01000005.1 Protein Homology CDS 4587 4895 . - 0 ID=cds-PDP77917.1;Parent=gene-CLI76_01645;Dbxref=NCBI_GP:PDP77917.1;Name=PDP77917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458039.1;locus_tag=CLI76_01645;product=DUF4286 domain-containing protein;protein_id=PDP77917.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 4986 5120 . + . ID=gene-CLI76_01650;Name=CLI76_01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01650;pseudo=true NSLT01000005.1 Protein Homology CDS 4986 5120 . + 0 ID=cds-CLI76_01650;Parent=gene-CLI76_01650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458040.1;locus_tag=CLI76_01650;product=hemagglutinin;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 5249 6559 . - . ID=gene-CLI76_01655;Name=CLI76_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01655 NSLT01000005.1 Protein Homology CDS 5249 6559 . - 0 ID=cds-PDP77865.1;Parent=gene-CLI76_01655;Dbxref=NCBI_GP:PDP77865.1;Name=PDP77865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458041.1;locus_tag=CLI76_01655;product=pyridoxal phosphate-dependent aminotransferase;protein_id=PDP77865.1;transl_table=11 NSLT01000005.1 Genbank gene 6602 8659 . - . ID=gene-CLI76_01660;Name=CLI76_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01660 NSLT01000005.1 Protein Homology CDS 6602 8659 . - 0 ID=cds-PDP77866.1;Parent=gene-CLI76_01660;Dbxref=NCBI_GP:PDP77866.1;Name=PDP77866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816662.1;locus_tag=CLI76_01660;product=CoA-binding protein;protein_id=PDP77866.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 8826 8995 . + . ID=gene-CLI76_01665;Name=CLI76_01665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01665;pseudo=true NSLT01000005.1 Protein Homology CDS 8826 8995 . + 0 ID=cds-CLI76_01665;Parent=gene-CLI76_01665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_01665;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000005.1 Genbank pseudogene 9021 9277 . - . ID=gene-CLI76_01670;Name=CLI76_01670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01670;pseudo=true NSLT01000005.1 Protein Homology CDS 9021 9277 . - 0 ID=cds-CLI76_01670;Parent=gene-CLI76_01670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956523.1;locus_tag=CLI76_01670;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 9523 9942 . + . ID=gene-CLI76_01675;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CLI76_01675 NSLT01000005.1 Protein Homology CDS 9523 9942 . + 0 ID=cds-PDP77867.1;Parent=gene-CLI76_01675;Dbxref=NCBI_GP:PDP77867.1;Name=PDP77867.1;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585532.1;locus_tag=CLI76_01675;product=large conductance mechanosensitive channel protein MscL;protein_id=PDP77867.1;transl_table=11 NSLT01000005.1 Genbank gene 10321 11478 . + . ID=gene-CLI76_01680;Name=CLI76_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01680 NSLT01000005.1 Protein Homology CDS 10321 11478 . + 0 ID=cds-PDP77868.1;Parent=gene-CLI76_01680;Dbxref=NCBI_GP:PDP77868.1;Name=PDP77868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331031.1;locus_tag=CLI76_01680;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha;protein_id=PDP77868.1;transl_table=11 NSLT01000005.1 Genbank gene 11592 11906 . + . ID=gene-CLI76_01685;Name=CLI76_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01685 NSLT01000005.1 Protein Homology CDS 11592 11906 . + 0 ID=cds-PDP77869.1;Parent=gene-CLI76_01685;Dbxref=NCBI_GP:PDP77869.1;Name=PDP77869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965970.1;locus_tag=CLI76_01685;product=pyridine nucleotide transhydrogenase;protein_id=PDP77869.1;transl_table=11 NSLT01000005.1 Genbank gene 11903 13891 . + . ID=gene-CLI76_01690;Name=CLI76_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01690 NSLT01000005.1 Protein Homology CDS 11903 13891 . + 0 ID=cds-PDP77870.1;Parent=gene-CLI76_01690;Dbxref=NCBI_GP:PDP77870.1;Name=PDP77870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956284.1;locus_tag=CLI76_01690;product=NADP transhydrogenase subunit beta;protein_id=PDP77870.1;transl_table=11 NSLT01000005.1 Genbank gene 14034 15233 . - . ID=gene-CLI76_01695;Name=CLI76_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01695 NSLT01000005.1 Protein Homology CDS 14034 15233 . - 0 ID=cds-PDP77871.1;Parent=gene-CLI76_01695;Dbxref=NCBI_GP:PDP77871.1;Name=PDP77871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875239.1;locus_tag=CLI76_01695;product=hypothetical protein;protein_id=PDP77871.1;transl_table=11 NSLT01000005.1 Genbank gene 15230 16210 . - . ID=gene-CLI76_01700;Name=CLI76_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01700 NSLT01000005.1 Protein Homology CDS 15230 16210 . - 0 ID=cds-PDP77872.1;Parent=gene-CLI76_01700;Dbxref=NCBI_GP:PDP77872.1;Name=PDP77872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965643.1;locus_tag=CLI76_01700;product=SPFH/Band 7/PHB domain protein;protein_id=PDP77872.1;transl_table=11 NSLT01000005.1 Genbank gene 16238 16702 . - . ID=gene-CLI76_01705;Name=CLI76_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01705 NSLT01000005.1 Protein Homology CDS 16238 16702 . - 0 ID=cds-PDP77873.1;Parent=gene-CLI76_01705;Dbxref=NCBI_GP:PDP77873.1;Name=PDP77873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585524.1;locus_tag=CLI76_01705;product=NfeD family protein;protein_id=PDP77873.1;transl_table=11 NSLT01000005.1 Genbank gene 17175 17357 . + . ID=gene-CLI76_01710;Name=CLI76_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01710 NSLT01000005.1 Protein Homology CDS 17175 17357 . + 0 ID=cds-PDP77874.1;Parent=gene-CLI76_01710;Dbxref=NCBI_GP:PDP77874.1;Name=PDP77874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875236.1;locus_tag=CLI76_01710;product=hypothetical protein;protein_id=PDP77874.1;transl_table=11 NSLT01000005.1 Genbank gene 17670 18095 . + . ID=gene-CLI76_01715;Name=CLI76_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01715 NSLT01000005.1 Protein Homology CDS 17670 18095 . + 0 ID=cds-PDP77875.1;Parent=gene-CLI76_01715;Dbxref=NCBI_GP:PDP77875.1;Name=PDP77875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956286.1;locus_tag=CLI76_01715;product=umuD protein;protein_id=PDP77875.1;transl_table=11 NSLT01000005.1 Genbank gene 18103 19401 . + . ID=gene-CLI76_01720;Name=CLI76_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01720 NSLT01000005.1 Protein Homology CDS 18103 19401 . + 0 ID=cds-PDP77876.1;Parent=gene-CLI76_01720;Dbxref=NCBI_GP:PDP77876.1;Name=PDP77876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816656.1;locus_tag=CLI76_01720;product=ImpB/MucB/SamB family protein;protein_id=PDP77876.1;transl_table=11 NSLT01000005.1 Genbank gene 19412 19624 . + . ID=gene-CLI76_01725;Name=CLI76_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01725 NSLT01000005.1 Protein Homology CDS 19412 19624 . + 0 ID=cds-PDP77877.1;Parent=gene-CLI76_01725;Dbxref=NCBI_GP:PDP77877.1;Name=PDP77877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458255.1;locus_tag=CLI76_01725;product=hypothetical protein;protein_id=PDP77877.1;transl_table=11 NSLT01000005.1 Genbank gene 20253 20329 . - . ID=gene-CLI76_01730;Name=CLI76_01730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_01730 NSLT01000005.1 tRNAscan-SE tRNA 20253 20329 . - . ID=rna-CLI76_01730;Parent=gene-CLI76_01730;anticodon=(pos:complement(20293..20295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01730;product=tRNA-Met NSLT01000005.1 tRNAscan-SE exon 20253 20329 . - . ID=exon-CLI76_01730-1;Parent=rna-CLI76_01730;anticodon=(pos:complement(20293..20295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_01730;product=tRNA-Met NSLT01000005.1 Genbank gene 20502 21194 . + . ID=gene-CLI76_01735;Name=CLI76_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01735 NSLT01000005.1 Protein Homology CDS 20502 21194 . + 0 ID=cds-PDP77878.1;Parent=gene-CLI76_01735;Dbxref=NCBI_GP:PDP77878.1;Name=PDP77878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584127.1;locus_tag=CLI76_01735;product=hypothetical protein;protein_id=PDP77878.1;transl_table=11 NSLT01000005.1 Genbank gene 21418 23070 . + . ID=gene-CLI76_01740;Name=CLI76_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01740 NSLT01000005.1 Protein Homology CDS 21418 23070 . + 0 ID=cds-PDP77879.1;Parent=gene-CLI76_01740;Dbxref=NCBI_GP:PDP77879.1;Name=PDP77879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875197.1;locus_tag=CLI76_01740;product=hydroxylamine reductase;protein_id=PDP77879.1;transl_table=11 NSLT01000005.1 Genbank gene 24223 25227 . - . ID=gene-CLI76_01745;Name=CLI76_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01745 NSLT01000005.1 Protein Homology CDS 24223 25227 . - 0 ID=cds-PDP77880.1;Parent=gene-CLI76_01745;Dbxref=NCBI_GP:PDP77880.1;Name=PDP77880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467514.1;locus_tag=CLI76_01745;product=malate dehydrogenase;protein_id=PDP77880.1;transl_table=11 NSLT01000005.1 Genbank gene 25372 25542 . + . ID=gene-CLI76_01750;Name=CLI76_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01750 NSLT01000005.1 Protein Homology CDS 25372 25542 . + 0 ID=cds-PDP77881.1;Parent=gene-CLI76_01750;Dbxref=NCBI_GP:PDP77881.1;Name=PDP77881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815564.1;locus_tag=CLI76_01750;product=DUF1661 domain-containing protein;protein_id=PDP77881.1;transl_table=11 NSLT01000005.1 Genbank gene 25689 26849 . + . ID=gene-CLI76_01755;Name=CLI76_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01755 NSLT01000005.1 Protein Homology CDS 25689 26849 . + 0 ID=cds-PDP77882.1;Parent=gene-CLI76_01755;Dbxref=NCBI_GP:PDP77882.1;Name=PDP77882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873875.1;locus_tag=CLI76_01755;product=AI-2E family transporter;protein_id=PDP77882.1;transl_table=11 NSLT01000005.1 Genbank gene 27231 28931 . + . ID=gene-CLI76_01760;Name=CLI76_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01760 NSLT01000005.1 Protein Homology CDS 27231 28931 . + 0 ID=cds-PDP77883.1;Parent=gene-CLI76_01760;Dbxref=NCBI_GP:PDP77883.1;Name=PDP77883.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873878.1;locus_tag=CLI76_01760;product=glutamine--tRNA ligase;protein_id=PDP77883.1;transl_table=11 NSLT01000005.1 Genbank gene 28959 29606 . + . ID=gene-CLI76_01765;Name=CLI76_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01765 NSLT01000005.1 Protein Homology CDS 28959 29606 . + 0 ID=cds-PDP77884.1;Parent=gene-CLI76_01765;Dbxref=NCBI_GP:PDP77884.1;Name=PDP77884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956453.1;locus_tag=CLI76_01765;product=DedA family protein;protein_id=PDP77884.1;transl_table=11 NSLT01000005.1 Genbank gene 29668 30603 . + . ID=gene-CLI76_01770;Name=CLI76_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01770 NSLT01000005.1 Protein Homology CDS 29668 30603 . + 0 ID=cds-PDP77885.1;Parent=gene-CLI76_01770;Dbxref=NCBI_GP:PDP77885.1;Name=PDP77885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583615.1;locus_tag=CLI76_01770;product=YitT family protein;protein_id=PDP77885.1;transl_table=11 NSLT01000005.1 Genbank gene 30607 31626 . + . ID=gene-CLI76_01775;Name=CLI76_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01775 NSLT01000005.1 Protein Homology CDS 30607 31626 . + 0 ID=cds-PDP77886.1;Parent=gene-CLI76_01775;Dbxref=NCBI_GP:PDP77886.1;Name=PDP77886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815247.1;locus_tag=CLI76_01775;product=NAD(P)-dependent oxidoreductase;protein_id=PDP77886.1;transl_table=11 NSLT01000005.1 Genbank gene 32347 33642 . - . ID=gene-CLI76_01780;Name=CLI76_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01780 NSLT01000005.1 Protein Homology CDS 32347 33642 . - 0 ID=cds-PDP77887.1;Parent=gene-CLI76_01780;Dbxref=NCBI_GP:PDP77887.1;Name=PDP77887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964697.1;locus_tag=CLI76_01780;product=4-hydroxybutyrate CoA-transferase;protein_id=PDP77887.1;transl_table=11 NSLT01000005.1 Genbank gene 34180 34329 . - . ID=gene-CLI76_01785;Name=CLI76_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01785 NSLT01000005.1 Protein Homology CDS 34180 34329 . - 0 ID=cds-PDP77888.1;Parent=gene-CLI76_01785;Dbxref=NCBI_GP:PDP77888.1;Name=PDP77888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007366321.1;locus_tag=CLI76_01785;product=DUF4295 domain-containing protein;protein_id=PDP77888.1;transl_table=11 NSLT01000005.1 Genbank gene 34348 34536 . - . ID=gene-CLI76_01790;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CLI76_01790 NSLT01000005.1 Protein Homology CDS 34348 34536 . - 0 ID=cds-PDP77889.1;Parent=gene-CLI76_01790;Dbxref=NCBI_GP:PDP77889.1;Name=PDP77889.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013616632.1;locus_tag=CLI76_01790;product=50S ribosomal protein L33;protein_id=PDP77889.1;transl_table=11 NSLT01000005.1 Genbank gene 34556 34795 . - . ID=gene-CLI76_01795;Name=CLI76_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01795 NSLT01000005.1 Protein Homology CDS 34556 34795 . - 0 ID=cds-PDP77890.1;Parent=gene-CLI76_01795;Dbxref=NCBI_GP:PDP77890.1;Name=PDP77890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005857630.1;locus_tag=CLI76_01795;product=50S ribosomal protein L28;protein_id=PDP77890.1;transl_table=11 NSLT01000005.1 Genbank gene 35018 37285 . - . ID=gene-CLI76_01800;Name=CLI76_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01800 NSLT01000005.1 Protein Homology CDS 35018 37285 . - 0 ID=cds-PDP77891.1;Parent=gene-CLI76_01800;Dbxref=NCBI_GP:PDP77891.1;Name=PDP77891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874814.1;locus_tag=CLI76_01800;product=inorganic phosphate transporter;protein_id=PDP77891.1;transl_table=11 NSLT01000005.1 Genbank gene 37482 38108 . - . ID=gene-CLI76_01805;Name=CLI76_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01805 NSLT01000005.1 Protein Homology CDS 37482 38108 . - 0 ID=cds-PDP77892.1;Parent=gene-CLI76_01805;Dbxref=NCBI_GP:PDP77892.1;Name=PDP77892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583626.1;locus_tag=CLI76_01805;product=DNA-binding protein;protein_id=PDP77892.1;transl_table=11 NSLT01000005.1 Genbank gene 38389 39801 . - . ID=gene-CLI76_01810;Name=CLI76_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01810 NSLT01000005.1 Protein Homology CDS 38389 39801 . - 0 ID=cds-PDP77918.1;Parent=gene-CLI76_01810;Dbxref=NCBI_GP:PDP77918.1;Name=PDP77918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964677.1;locus_tag=CLI76_01810;product=cell filamentation protein Fic;protein_id=PDP77918.1;transl_table=11 NSLT01000005.1 Genbank gene 39927 40502 . + . ID=gene-CLI76_01815;Name=CLI76_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01815 NSLT01000005.1 Protein Homology CDS 39927 40502 . + 0 ID=cds-PDP77893.1;Parent=gene-CLI76_01815;Dbxref=NCBI_GP:PDP77893.1;Name=PDP77893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583630.1;locus_tag=CLI76_01815;product=threonylcarbamoyl-AMP synthase;protein_id=PDP77893.1;transl_table=11 NSLT01000005.1 Genbank gene 40499 41905 . + . ID=gene-CLI76_01820;Name=CLI76_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01820 NSLT01000005.1 Protein Homology CDS 40499 41905 . + 0 ID=cds-PDP77894.1;Parent=gene-CLI76_01820;Dbxref=NCBI_GP:PDP77894.1;Name=PDP77894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583631.1;locus_tag=CLI76_01820;product=sugar transferase;protein_id=PDP77894.1;transl_table=11 NSLT01000005.1 Genbank gene 41902 43698 . + . ID=gene-CLI76_01825;Name=CLI76_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01825 NSLT01000005.1 Protein Homology CDS 41902 43698 . + 0 ID=cds-PDP77895.1;Parent=gene-CLI76_01825;Dbxref=NCBI_GP:PDP77895.1;Name=PDP77895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583632.1;locus_tag=CLI76_01825;product=chloride channel protein;protein_id=PDP77895.1;transl_table=11 NSLT01000005.1 Genbank gene 43659 44657 . - . ID=gene-CLI76_01830;Name=CLI76_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01830 NSLT01000005.1 Protein Homology CDS 43659 44657 . - 0 ID=cds-PDP77896.1;Parent=gene-CLI76_01830;Dbxref=NCBI_GP:PDP77896.1;Name=PDP77896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874833.1;locus_tag=CLI76_01830;product=mechanosensitive ion channel protein MscS;protein_id=PDP77896.1;transl_table=11 NSLT01000005.1 Genbank gene 44759 45646 . + . ID=gene-CLI76_01835;Name=CLI76_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01835 NSLT01000005.1 Protein Homology CDS 44759 45646 . + 0 ID=cds-PDP77897.1;Parent=gene-CLI76_01835;Dbxref=NCBI_GP:PDP77897.1;Name=PDP77897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583634.1;locus_tag=CLI76_01835;product=hypothetical protein;protein_id=PDP77897.1;transl_table=11 NSLT01000005.1 Genbank gene 45738 46640 . - . ID=gene-CLI76_01840;Name=CLI76_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01840 NSLT01000005.1 Protein Homology CDS 45738 46640 . - 0 ID=cds-PDP77898.1;Parent=gene-CLI76_01840;Dbxref=NCBI_GP:PDP77898.1;Name=PDP77898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956456.1;locus_tag=CLI76_01840;product=secretion protein;protein_id=PDP77898.1;transl_table=11 NSLT01000005.1 Genbank gene 46609 46908 . - . ID=gene-CLI76_01845;Name=CLI76_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01845 NSLT01000005.1 Protein Homology CDS 46609 46908 . - 0 ID=cds-PDP77899.1;Parent=gene-CLI76_01845;Dbxref=NCBI_GP:PDP77899.1;Name=PDP77899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815257.1;locus_tag=CLI76_01845;product=hypothetical protein;protein_id=PDP77899.1;transl_table=11 NSLT01000005.1 Genbank gene 47247 48302 . + . ID=gene-CLI76_01850;Name=CLI76_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01850 NSLT01000005.1 Protein Homology CDS 47247 48302 . + 0 ID=cds-PDP77900.1;Parent=gene-CLI76_01850;Dbxref=NCBI_GP:PDP77900.1;Name=PDP77900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458603.1;locus_tag=CLI76_01850;product=hemagglutinin;protein_id=PDP77900.1;transl_table=11 NSLT01000005.1 Genbank gene 48425 48973 . - . ID=gene-CLI76_01855;Name=CLI76_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01855 NSLT01000005.1 GeneMarkS+ CDS 48425 48973 . - 0 ID=cds-PDP77901.1;Parent=gene-CLI76_01855;Dbxref=NCBI_GP:PDP77901.1;Name=PDP77901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01855;product=hypothetical protein;protein_id=PDP77901.1;transl_table=11 NSLT01000005.1 Genbank gene 49134 49682 . - . ID=gene-CLI76_01860;Name=CLI76_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01860 NSLT01000005.1 GeneMarkS+ CDS 49134 49682 . - 0 ID=cds-PDP77902.1;Parent=gene-CLI76_01860;Dbxref=NCBI_GP:PDP77902.1;Name=PDP77902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01860;product=hypothetical protein;protein_id=PDP77902.1;transl_table=11 NSLT01000005.1 Genbank gene 49839 50348 . - . ID=gene-CLI76_01865;Name=CLI76_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01865 NSLT01000005.1 GeneMarkS+ CDS 49839 50348 . - 0 ID=cds-PDP77903.1;Parent=gene-CLI76_01865;Dbxref=NCBI_GP:PDP77903.1;Name=PDP77903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01865;product=hypothetical protein;protein_id=PDP77903.1;transl_table=11 NSLT01000005.1 Genbank gene 50375 51859 . - . ID=gene-CLI76_01870;Name=CLI76_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01870 NSLT01000005.1 Protein Homology CDS 50375 51859 . - 0 ID=cds-PDP77904.1;Parent=gene-CLI76_01870;Dbxref=NCBI_GP:PDP77904.1;Name=PDP77904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01551.20;locus_tag=CLI76_01870;product=hypothetical protein;protein_id=PDP77904.1;transl_table=11 NSLT01000005.1 Genbank gene 52017 54020 . - . ID=gene-CLI76_01875;Name=CLI76_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01875 NSLT01000005.1 Protein Homology CDS 52017 54020 . - 0 ID=cds-PDP77905.1;Parent=gene-CLI76_01875;Dbxref=NCBI_GP:PDP77905.1;Name=PDP77905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815262.1;locus_tag=CLI76_01875;product=hypothetical protein;protein_id=PDP77905.1;transl_table=11 NSLT01000005.1 Genbank gene 54050 54640 . - . ID=gene-CLI76_01880;Name=CLI76_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01880 NSLT01000005.1 Protein Homology CDS 54050 54640 . - 0 ID=cds-PDP77906.1;Parent=gene-CLI76_01880;Dbxref=NCBI_GP:PDP77906.1;Name=PDP77906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815263.1;locus_tag=CLI76_01880;product=hypothetical protein;protein_id=PDP77906.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 55079 55180 . - . ID=gene-CLI76_01885;Name=CLI76_01885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01885;pseudo=true NSLT01000005.1 Protein Homology CDS 55079 55180 . - 0 ID=cds-CLI76_01885;Parent=gene-CLI76_01885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874071.1;locus_tag=CLI76_01885;product=DNA methylase;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 55230 56315 . - . ID=gene-CLI76_01890;Name=CLI76_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01890 NSLT01000005.1 Protein Homology CDS 55230 56315 . - 0 ID=cds-PDP77907.1;Parent=gene-CLI76_01890;Dbxref=NCBI_GP:PDP77907.1;Name=PDP77907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458050.1;locus_tag=CLI76_01890;product=IS5/IS1182 family transposase;protein_id=PDP77907.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 56422 57087 . - . ID=gene-CLI76_01895;Name=CLI76_01895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01895;pseudo=true NSLT01000005.1 Protein Homology CDS 56422 57087 . - 0 ID=cds-CLI76_01895;Parent=gene-CLI76_01895;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816079.1;locus_tag=CLI76_01895;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 57432 58625 . - . ID=gene-CLI76_01900;Name=CLI76_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01900 NSLT01000005.1 Protein Homology CDS 57432 58625 . - 0 ID=cds-PDP77919.1;Parent=gene-CLI76_01900;Dbxref=NCBI_GP:PDP77919.1;Name=PDP77919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004368397.1;locus_tag=CLI76_01900;product=virulence protein;protein_id=PDP77919.1;transl_table=11 NSLT01000005.1 Genbank gene 58652 59008 . - . ID=gene-CLI76_01905;Name=CLI76_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01905 NSLT01000005.1 Protein Homology CDS 58652 59008 . - 0 ID=cds-PDP77908.1;Parent=gene-CLI76_01905;Dbxref=NCBI_GP:PDP77908.1;Name=PDP77908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014224125.1;locus_tag=CLI76_01905;product=DNA-binding protein;protein_id=PDP77908.1;transl_table=11 NSLT01000005.1 Genbank gene 59331 59981 . + . ID=gene-CLI76_01910;Name=CLI76_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01910 NSLT01000005.1 Protein Homology CDS 59331 59981 . + 0 ID=cds-PDP77920.1;Parent=gene-CLI76_01910;Dbxref=NCBI_GP:PDP77920.1;Name=PDP77920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230746.1;locus_tag=CLI76_01910;product=DUF4263 domain-containing protein;protein_id=PDP77920.1;transl_table=11 NSLT01000005.1 Genbank gene 60135 60368 . - . ID=gene-CLI76_01915;Name=CLI76_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01915 NSLT01000005.1 Protein Homology CDS 60135 60368 . - 0 ID=cds-PDP77921.1;Parent=gene-CLI76_01915;Dbxref=NCBI_GP:PDP77921.1;Name=PDP77921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956247.1;locus_tag=CLI76_01915;product=hypothetical protein;protein_id=PDP77921.1;transl_table=11 NSLT01000005.1 Genbank gene 60545 60841 . - . ID=gene-CLI76_01920;Name=CLI76_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01920 NSLT01000005.1 GeneMarkS+ CDS 60545 60841 . - 0 ID=cds-PDP77909.1;Parent=gene-CLI76_01920;Dbxref=NCBI_GP:PDP77909.1;Name=PDP77909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01920;product=hypothetical protein;protein_id=PDP77909.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 60862 62124 . - . ID=gene-CLI76_01925;Name=CLI76_01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01925;pseudo=true NSLT01000005.1 Protein Homology CDS 60862 62124 . - 0 ID=cds-CLI76_01925;Parent=gene-CLI76_01925;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457877.1;locus_tag=CLI76_01925;product=recombinase;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 62137 62691 . - . ID=gene-CLI76_01930;Name=CLI76_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01930 NSLT01000005.1 Protein Homology CDS 62137 62691 . - 0 ID=cds-PDP77910.1;Parent=gene-CLI76_01930;Dbxref=NCBI_GP:PDP77910.1;Name=PDP77910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004345233.1;locus_tag=CLI76_01930;product=DNA-binding protein;protein_id=PDP77910.1;transl_table=11 NSLT01000005.1 Genbank gene 62902 64824 . - . ID=gene-CLI76_01935;Name=CLI76_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01935 NSLT01000005.1 Protein Homology CDS 62902 64824 . - 0 ID=cds-PDP77911.1;Parent=gene-CLI76_01935;Dbxref=NCBI_GP:PDP77911.1;Name=PDP77911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008149022.1;locus_tag=CLI76_01935;product=molecular chaperone DnaK;protein_id=PDP77911.1;transl_table=11 NSLT01000005.1 Genbank pseudogene 65041 65268 . + . ID=gene-CLI76_01940;Name=CLI76_01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_01940;pseudo=true NSLT01000005.1 Protein Homology CDS 65041 65268 . + 0 ID=cds-CLI76_01940;Parent=gene-CLI76_01940;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815494.1;locus_tag=CLI76_01940;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000005.1 Genbank gene 65407 66954 . + . ID=gene-CLI76_01945;Name=CLI76_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01945 NSLT01000005.1 Protein Homology CDS 65407 66954 . + 0 ID=cds-PDP77912.1;Parent=gene-CLI76_01945;Dbxref=NCBI_GP:PDP77912.1;Name=PDP77912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457875.1;locus_tag=CLI76_01945;product=NAD metabolism ATPase/kinase;protein_id=PDP77912.1;transl_table=11 NSLT01000005.1 Genbank gene 67003 68790 . + . ID=gene-CLI76_01950;Name=CLI76_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01950 NSLT01000005.1 Protein Homology CDS 67003 68790 . + 0 ID=cds-PDP77913.1;Parent=gene-CLI76_01950;Dbxref=NCBI_GP:PDP77913.1;Name=PDP77913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584481.1;locus_tag=CLI76_01950;product=aminopeptidase P family protein;protein_id=PDP77913.1;transl_table=11 NSLT01000005.1 Genbank gene 68799 69338 . + . ID=gene-CLI76_01955;Name=CLI76_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01955 NSLT01000005.1 Protein Homology CDS 68799 69338 . + 0 ID=cds-PDP77914.1;Parent=gene-CLI76_01955;Dbxref=NCBI_GP:PDP77914.1;Name=PDP77914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584482.1;locus_tag=CLI76_01955;product=gamma carbonic anhydrase family protein;protein_id=PDP77914.1;transl_table=11 NSLT01000005.1 Genbank gene 69351 70364 . + . ID=gene-CLI76_01960;Name=CLI76_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01960 NSLT01000005.1 Protein Homology CDS 69351 70364 . + 0 ID=cds-PDP77915.1;Parent=gene-CLI76_01960;Dbxref=NCBI_GP:PDP77915.1;Name=PDP77915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875017.1;locus_tag=CLI76_01960;product=hypothetical protein;protein_id=PDP77915.1;transl_table=11 NSLT01000005.1 Genbank gene 70392 71042 . + . ID=gene-CLI76_01965;Name=CLI76_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01965 NSLT01000005.1 Protein Homology CDS 70392 71042 . + 0 ID=cds-PDP77916.1;Parent=gene-CLI76_01965;Dbxref=NCBI_GP:PDP77916.1;Name=PDP77916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815961.1;locus_tag=CLI76_01965;product=ribonuclease H;protein_id=PDP77916.1;transl_table=11 NSLT01000005.1 Genbank gene 71057 72229 . + . ID=gene-CLI76_01970;Name=CLI76_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01970 NSLT01000005.1 Protein Homology CDS 71057 72229 . + 0 ID=cds-PDP77922.1;Parent=gene-CLI76_01970;Dbxref=NCBI_GP:PDP77922.1;Name=PDP77922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457870.1;locus_tag=CLI76_01970;product=hypothetical protein;protein_id=PDP77922.1;transl_table=11 ##sequence-region NSLT01000060.1 1 12707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000060.1 Genbank region 1 12707 . + . ID=NSLT01000060.1:1..12707;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000060.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_09475;Name=CLI76_09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09475;pseudo=true NSLT01000060.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_09475;Parent=gene-CLI76_09475;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09475;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000060.1 Genbank gene 611 2032 . + . ID=gene-CLI76_09480;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CLI76_09480 NSLT01000060.1 Protein Homology CDS 611 2032 . + 0 ID=cds-PDP76480.1;Parent=gene-CLI76_09480;Dbxref=NCBI_GP:PDP76480.1;Name=PDP76480.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965134.1;locus_tag=CLI76_09480;product=cardiolipin synthase;protein_id=PDP76480.1;transl_table=11 NSLT01000060.1 Genbank gene 2100 4340 . + . ID=gene-CLI76_09485;Name=CLI76_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09485 NSLT01000060.1 Protein Homology CDS 2100 4340 . + 0 ID=cds-PDP76481.1;Parent=gene-CLI76_09485;Dbxref=NCBI_GP:PDP76481.1;Name=PDP76481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457527.1;locus_tag=CLI76_09485;product=RelA/SpoT family protein;protein_id=PDP76481.1;transl_table=11 NSLT01000060.1 Genbank gene 4598 7585 . + . ID=gene-CLI76_09490;Name=CLI76_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09490 NSLT01000060.1 Protein Homology CDS 4598 7585 . + 0 ID=cds-PDP76482.1;Parent=gene-CLI76_09490;Dbxref=NCBI_GP:PDP76482.1;Name=PDP76482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815561.1;locus_tag=CLI76_09490;product=hypothetical protein;protein_id=PDP76482.1;transl_table=11 NSLT01000060.1 Genbank gene 7621 9402 . + . ID=gene-CLI76_09495;Name=CLI76_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09495 NSLT01000060.1 Protein Homology CDS 7621 9402 . + 0 ID=cds-PDP76483.1;Parent=gene-CLI76_09495;Dbxref=NCBI_GP:PDP76483.1;Name=PDP76483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457525.1;locus_tag=CLI76_09495;product=hypothetical protein;protein_id=PDP76483.1;transl_table=11 NSLT01000060.1 Genbank gene 9427 10650 . + . ID=gene-CLI76_09500;Name=CLI76_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09500 NSLT01000060.1 Protein Homology CDS 9427 10650 . + 0 ID=cds-PDP76484.1;Parent=gene-CLI76_09500;Dbxref=NCBI_GP:PDP76484.1;Name=PDP76484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583996.1;locus_tag=CLI76_09500;product=Cof-type HAD-IIB family hydrolase;protein_id=PDP76484.1;transl_table=11 NSLT01000060.1 Genbank gene 10682 11353 . + . ID=gene-CLI76_09505;Name=CLI76_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09505 NSLT01000060.1 Protein Homology CDS 10682 11353 . + 0 ID=cds-PDP76485.1;Parent=gene-CLI76_09505;Dbxref=NCBI_GP:PDP76485.1;Name=PDP76485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583995.1;locus_tag=CLI76_09505;product=peptidase M15;protein_id=PDP76485.1;transl_table=11 NSLT01000060.1 Genbank gene 11483 12148 . - . ID=gene-CLI76_09510;Name=CLI76_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09510 NSLT01000060.1 Protein Homology CDS 11483 12148 . - 0 ID=cds-PDP76486.1;Parent=gene-CLI76_09510;Dbxref=NCBI_GP:PDP76486.1;Name=PDP76486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01926.21;locus_tag=CLI76_09510;product=hypothetical protein;protein_id=PDP76486.1;transl_table=11 NSLT01000060.1 Genbank gene 12161 12505 . - . ID=gene-CLI76_09515;Name=CLI76_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09515 NSLT01000060.1 GeneMarkS+ CDS 12161 12505 . - 0 ID=cds-PDP76487.1;Parent=gene-CLI76_09515;Dbxref=NCBI_GP:PDP76487.1;Name=PDP76487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09515;product=hypothetical protein;protein_id=PDP76487.1;transl_table=11 NSLT01000060.1 Genbank gene 12594 12707 . - . ID=gene-CLI76_09520;Name=CLI76_09520;end_range=12707,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09520;partial=true NSLT01000060.1 Protein Homology CDS 12594 12707 . - 0 ID=cds-PDP76488.1;Parent=gene-CLI76_09520;Dbxref=NCBI_GP:PDP76488.1;Name=PDP76488.1;end_range=12707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584588.1;locus_tag=CLI76_09520;partial=true;product=ISAs1 family transposase;protein_id=PDP76488.1;transl_table=11 ##sequence-region NSLT01000061.1 1 12638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000061.1 Genbank region 1 12638 . + . ID=NSLT01000061.1:1..12638;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000061.1 Genbank gene 1 182 . + . ID=gene-CLI76_09525;Name=CLI76_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09525;partial=true;start_range=.,1 NSLT01000061.1 GeneMarkS+ CDS 1 182 . + 2 ID=cds-PDP76468.1;Parent=gene-CLI76_09525;Dbxref=NCBI_GP:PDP76468.1;Name=PDP76468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09525;partial=true;product=hypothetical protein;protein_id=PDP76468.1;start_range=.,1;transl_table=11 NSLT01000061.1 Genbank gene 392 754 . + . ID=gene-CLI76_09530;Name=CLI76_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09530 NSLT01000061.1 Protein Homology CDS 392 754 . + 0 ID=cds-PDP76469.1;Parent=gene-CLI76_09530;Dbxref=NCBI_GP:PDP76469.1;Name=PDP76469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873489.1;locus_tag=CLI76_09530;product=hypothetical protein;protein_id=PDP76469.1;transl_table=11 NSLT01000061.1 Genbank gene 754 966 . + . ID=gene-CLI76_09535;Name=CLI76_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09535 NSLT01000061.1 Protein Homology CDS 754 966 . + 0 ID=cds-PDP76470.1;Parent=gene-CLI76_09535;Dbxref=NCBI_GP:PDP76470.1;Name=PDP76470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873488.1;locus_tag=CLI76_09535;product=hypothetical protein;protein_id=PDP76470.1;transl_table=11 NSLT01000061.1 Genbank gene 1157 2764 . - . ID=gene-CLI76_09540;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CLI76_09540 NSLT01000061.1 Protein Homology CDS 1157 2764 . - 0 ID=cds-PDP76471.1;Parent=gene-CLI76_09540;Dbxref=NCBI_GP:PDP76471.1;Name=PDP76471.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015546495.1;locus_tag=CLI76_09540;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=PDP76471.1;transl_table=11 NSLT01000061.1 Genbank gene 3061 4317 . + . ID=gene-CLI76_09545;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CLI76_09545 NSLT01000061.1 Protein Homology CDS 3061 4317 . + 0 ID=cds-PDP76472.1;Parent=gene-CLI76_09545;Dbxref=NCBI_GP:PDP76472.1;Name=PDP76472.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457503.1;locus_tag=CLI76_09545;product=phosphoglycerate kinase;protein_id=PDP76472.1;transl_table=11 NSLT01000061.1 Genbank gene 4513 5907 . + . ID=gene-CLI76_09550;Name=CLI76_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09550 NSLT01000061.1 Protein Homology CDS 4513 5907 . + 0 ID=cds-PDP76479.1;Parent=gene-CLI76_09550;Dbxref=NCBI_GP:PDP76479.1;Name=PDP76479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956369.1;locus_tag=CLI76_09550;product=hypothetical protein;protein_id=PDP76479.1;transl_table=11 NSLT01000061.1 Genbank gene 5942 6643 . + . ID=gene-CLI76_09555;Name=CLI76_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09555 NSLT01000061.1 Protein Homology CDS 5942 6643 . + 0 ID=cds-PDP76473.1;Parent=gene-CLI76_09555;Dbxref=NCBI_GP:PDP76473.1;Name=PDP76473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457501.1;locus_tag=CLI76_09555;product=ABC transporter ATP-binding protein;protein_id=PDP76473.1;transl_table=11 NSLT01000061.1 Genbank gene 7130 9106 . + . ID=gene-CLI76_09560;Name=CLI76_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09560 NSLT01000061.1 Protein Homology CDS 7130 9106 . + 0 ID=cds-PDP76474.1;Parent=gene-CLI76_09560;Dbxref=NCBI_GP:PDP76474.1;Name=PDP76474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873494.1;locus_tag=CLI76_09560;product=4-alpha-glucanotransferase;protein_id=PDP76474.1;transl_table=11 NSLT01000061.1 Genbank gene 9103 10365 . + . ID=gene-CLI76_09565;Name=CLI76_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09565 NSLT01000061.1 Protein Homology CDS 9103 10365 . + 0 ID=cds-PDP76475.1;Parent=gene-CLI76_09565;Dbxref=NCBI_GP:PDP76475.1;Name=PDP76475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457499.1;locus_tag=CLI76_09565;product=4-alpha-glucanotransferase;protein_id=PDP76475.1;transl_table=11 NSLT01000061.1 Genbank gene 10362 11648 . + . ID=gene-CLI76_09570;Name=CLI76_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09570 NSLT01000061.1 Protein Homology CDS 10362 11648 . + 0 ID=cds-PDP76476.1;Parent=gene-CLI76_09570;Dbxref=NCBI_GP:PDP76476.1;Name=PDP76476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583971.1;locus_tag=CLI76_09570;product=alpha-amylase;protein_id=PDP76476.1;transl_table=11 NSLT01000061.1 Genbank gene 11645 12121 . + . ID=gene-CLI76_09575;Name=CLI76_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09575 NSLT01000061.1 Protein Homology CDS 11645 12121 . + 0 ID=cds-PDP76477.1;Parent=gene-CLI76_09575;Dbxref=NCBI_GP:PDP76477.1;Name=PDP76477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583970.1;locus_tag=CLI76_09575;product=hypothetical protein;protein_id=PDP76477.1;transl_table=11 NSLT01000061.1 Genbank gene 12266 12638 . + . ID=gene-CLI76_09580;Name=CLI76_09580;end_range=12638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09580;partial=true NSLT01000061.1 Protein Homology CDS 12266 12638 . + 0 ID=cds-PDP76478.1;Parent=gene-CLI76_09580;Dbxref=NCBI_GP:PDP76478.1;Name=PDP76478.1;end_range=12638,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09580;partial=true;product=IS3 family transposase;protein_id=PDP76478.1;transl_table=11 ##sequence-region NSLT01000062.1 1 11336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000062.1 Genbank region 1 11336 . + . ID=NSLT01000062.1:1..11336;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000062.1 Genbank gene 158 1060 . + . ID=gene-CLI76_09585;Name=CLI76_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09585 NSLT01000062.1 Protein Homology CDS 158 1060 . + 0 ID=cds-PDP76459.1;Parent=gene-CLI76_09585;Dbxref=NCBI_GP:PDP76459.1;Name=PDP76459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_09585;product=IS982 family transposase;protein_id=PDP76459.1;transl_table=11 NSLT01000062.1 cmsearch riboswitch 1146 1406 . + . ID=id-NSLT01000062.1:1146..1406;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000062.1 Genbank gene 1497 3893 . + . ID=gene-CLI76_09590;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CLI76_09590 NSLT01000062.1 Protein Homology CDS 1497 3893 . + 0 ID=cds-PDP76460.1;Parent=gene-CLI76_09590;Dbxref=NCBI_GP:PDP76460.1;Name=PDP76460.1;gbkey=CDS;gene=nrdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815995.1;locus_tag=CLI76_09590;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=PDP76460.1;transl_table=11 NSLT01000062.1 Genbank gene 3926 4417 . + . ID=gene-CLI76_09595;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CLI76_09595 NSLT01000062.1 Protein Homology CDS 3926 4417 . + 0 ID=cds-PDP76461.1;Parent=gene-CLI76_09595;Dbxref=NCBI_GP:PDP76461.1;Name=PDP76461.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965348.1;locus_tag=CLI76_09595;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=PDP76461.1;transl_table=11 NSLT01000062.1 Genbank gene 4529 4807 . + . ID=gene-CLI76_09600;Name=CLI76_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09600 NSLT01000062.1 Protein Homology CDS 4529 4807 . + 0 ID=cds-PDP76462.1;Parent=gene-CLI76_09600;Dbxref=NCBI_GP:PDP76462.1;Name=PDP76462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584585.1;locus_tag=CLI76_09600;product=integration host factor subunit beta;protein_id=PDP76462.1;transl_table=11 NSLT01000062.1 Genbank gene 5129 6643 . + . ID=gene-CLI76_09605;Name=CLI76_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09605 NSLT01000062.1 Protein Homology CDS 5129 6643 . + 0 ID=cds-PDP76463.1;Parent=gene-CLI76_09605;Dbxref=NCBI_GP:PDP76463.1;Name=PDP76463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815994.1;locus_tag=CLI76_09605;product=ribonuclease E/G;protein_id=PDP76463.1;transl_table=11 NSLT01000062.1 Genbank gene 6640 7263 . + . ID=gene-CLI76_09610;Name=CLI76_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09610 NSLT01000062.1 Protein Homology CDS 6640 7263 . + 0 ID=cds-PDP76464.1;Parent=gene-CLI76_09610;Dbxref=NCBI_GP:PDP76464.1;Name=PDP76464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458238.1;locus_tag=CLI76_09610;product=recombination protein RecR;protein_id=PDP76464.1;transl_table=11 NSLT01000062.1 Genbank gene 7270 7797 . + . ID=gene-CLI76_09615;Name=CLI76_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09615 NSLT01000062.1 Protein Homology CDS 7270 7797 . + 0 ID=cds-PDP76465.1;Parent=gene-CLI76_09615;Dbxref=NCBI_GP:PDP76465.1;Name=PDP76465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874739.1;locus_tag=CLI76_09615;product=GNAT family N-acetyltransferase;protein_id=PDP76465.1;transl_table=11 NSLT01000062.1 Genbank gene 7785 9794 . + . ID=gene-CLI76_09620;Name=CLI76_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09620 NSLT01000062.1 Protein Homology CDS 7785 9794 . + 0 ID=cds-PDP76466.1;Parent=gene-CLI76_09620;Dbxref=NCBI_GP:PDP76466.1;Name=PDP76466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965352.1;locus_tag=CLI76_09620;product=DNA ligase (NAD(+)) LigA;protein_id=PDP76466.1;transl_table=11 NSLT01000062.1 Genbank gene 9807 11042 . + . ID=gene-CLI76_09625;Name=CLI76_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09625 NSLT01000062.1 Protein Homology CDS 9807 11042 . + 0 ID=cds-PDP76467.1;Parent=gene-CLI76_09625;Dbxref=NCBI_GP:PDP76467.1;Name=PDP76467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965353.1;locus_tag=CLI76_09625;product=ABC transporter permease;protein_id=PDP76467.1;transl_table=11 NSLT01000062.1 Genbank pseudogene 11167 11265 . + . ID=gene-CLI76_09630;Name=CLI76_09630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09630;pseudo=true NSLT01000062.1 Protein Homology CDS 11167 11265 . + 0 ID=cds-CLI76_09630;Parent=gene-CLI76_09630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_09630;product=integrase;pseudo=true;transl_table=11 ##sequence-region NSLT01000063.1 1 10700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000063.1 Genbank region 1 10700 . + . ID=NSLT01000063.1:1..10700;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000063.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_09635;Name=CLI76_09635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09635;pseudo=true NSLT01000063.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_09635;Parent=gene-CLI76_09635;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09635;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000063.1 Genbank gene 752 1333 . + . ID=gene-CLI76_09640;Name=CLI76_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09640 NSLT01000063.1 Protein Homology CDS 752 1333 . + 0 ID=cds-PDP76451.1;Parent=gene-CLI76_09640;Dbxref=NCBI_GP:PDP76451.1;Name=PDP76451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584647.1;locus_tag=CLI76_09640;product=hypothetical protein;protein_id=PDP76451.1;transl_table=11 NSLT01000063.1 Genbank gene 1359 2831 . + . ID=gene-CLI76_09645;Name=CLI76_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09645 NSLT01000063.1 Protein Homology CDS 1359 2831 . + 0 ID=cds-PDP76452.1;Parent=gene-CLI76_09645;Dbxref=NCBI_GP:PDP76452.1;Name=PDP76452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584646.1;locus_tag=CLI76_09645;product=hypothetical protein;protein_id=PDP76452.1;transl_table=11 NSLT01000063.1 Genbank gene 2882 4033 . + . ID=gene-CLI76_09650;Name=CLI76_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09650 NSLT01000063.1 Protein Homology CDS 2882 4033 . + 0 ID=cds-PDP76453.1;Parent=gene-CLI76_09650;Dbxref=NCBI_GP:PDP76453.1;Name=PDP76453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965150.1;locus_tag=CLI76_09650;product=fimbrial protein;protein_id=PDP76453.1;transl_table=11 NSLT01000063.1 Genbank gene 4172 5083 . + . ID=gene-CLI76_09655;Name=CLI76_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09655 NSLT01000063.1 Protein Homology CDS 4172 5083 . + 0 ID=cds-PDP76454.1;Parent=gene-CLI76_09655;Dbxref=NCBI_GP:PDP76454.1;Name=PDP76454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873477.1;locus_tag=CLI76_09655;product=fimbrillin-A associated anchor protein Mfa1 and Mfa2;protein_id=PDP76454.1;transl_table=11 NSLT01000063.1 Genbank gene 5097 6470 . + . ID=gene-CLI76_09660;Name=CLI76_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09660 NSLT01000063.1 Protein Homology CDS 5097 6470 . + 0 ID=cds-PDP76458.1;Parent=gene-CLI76_09660;Dbxref=NCBI_GP:PDP76458.1;Name=PDP76458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873473.1;locus_tag=CLI76_09660;product=fimbrial assembly protein;protein_id=PDP76458.1;transl_table=11 NSLT01000063.1 Genbank gene 6485 8500 . + . ID=gene-CLI76_09665;Name=CLI76_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09665 NSLT01000063.1 Protein Homology CDS 6485 8500 . + 0 ID=cds-PDP76455.1;Parent=gene-CLI76_09665;Dbxref=NCBI_GP:PDP76455.1;Name=PDP76455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584642.1;locus_tag=CLI76_09665;product=protein FimD;protein_id=PDP76455.1;transl_table=11 NSLT01000063.1 Genbank gene 8497 10149 . + . ID=gene-CLI76_09670;Name=CLI76_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09670 NSLT01000063.1 Protein Homology CDS 8497 10149 . + 0 ID=cds-PDP76456.1;Parent=gene-CLI76_09670;Dbxref=NCBI_GP:PDP76456.1;Name=PDP76456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816035.1;locus_tag=CLI76_09670;product=protein FimE;protein_id=PDP76456.1;transl_table=11 NSLT01000063.1 Genbank gene 10328 10700 . + . ID=gene-CLI76_09675;Name=CLI76_09675;end_range=10700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09675;partial=true NSLT01000063.1 Protein Homology CDS 10328 10700 . + 0 ID=cds-PDP76457.1;Parent=gene-CLI76_09675;Dbxref=NCBI_GP:PDP76457.1;Name=PDP76457.1;end_range=10700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09675;partial=true;product=IS3 family transposase;protein_id=PDP76457.1;transl_table=11 ##sequence-region NSLT01000064.1 1 9487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000064.1 Genbank region 1 9487 . + . ID=NSLT01000064.1:1..9487;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000064.1 Genbank gene 660 2801 . + . ID=gene-CLI76_09680;Name=CLI76_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09680 NSLT01000064.1 Protein Homology CDS 660 2801 . + 0 ID=cds-PDP76447.1;Parent=gene-CLI76_09680;Dbxref=NCBI_GP:PDP76447.1;Name=PDP76447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816461.1;locus_tag=CLI76_09680;product=hypothetical protein;protein_id=PDP76447.1;transl_table=11 NSLT01000064.1 Genbank gene 2973 4079 . + . ID=gene-CLI76_09685;Name=CLI76_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09685 NSLT01000064.1 Protein Homology CDS 2973 4079 . + 0 ID=cds-PDP76448.1;Parent=gene-CLI76_09685;Dbxref=NCBI_GP:PDP76448.1;Name=PDP76448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457784.1;locus_tag=CLI76_09685;product=DUF2891 domain-containing protein;protein_id=PDP76448.1;transl_table=11 NSLT01000064.1 Genbank gene 4104 6797 . + . ID=gene-CLI76_09690;Name=CLI76_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09690 NSLT01000064.1 Protein Homology CDS 4104 6797 . + 0 ID=cds-PDP76449.1;Parent=gene-CLI76_09690;Dbxref=NCBI_GP:PDP76449.1;Name=PDP76449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585304.1;locus_tag=CLI76_09690;product=4-alpha-glucanotransferase;protein_id=PDP76449.1;transl_table=11 NSLT01000064.1 Genbank gene 6950 9181 . + . ID=gene-CLI76_09695;Name=CLI76_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09695 NSLT01000064.1 Protein Homology CDS 6950 9181 . + 0 ID=cds-PDP76450.1;Parent=gene-CLI76_09695;Dbxref=NCBI_GP:PDP76450.1;Name=PDP76450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008155745.1;locus_tag=CLI76_09695;product=polyribonucleotide nucleotidyltransferase;protein_id=PDP76450.1;transl_table=11 ##sequence-region NSLT01000065.1 1 8878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000065.1 Genbank region 1 8878 . + . ID=NSLT01000065.1:1..8878;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000065.1 Genbank gene 908 1348 . + . ID=gene-CLI76_09700;Name=CLI76_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09700 NSLT01000065.1 Protein Homology CDS 908 1348 . + 0 ID=cds-PDP76438.1;Parent=gene-CLI76_09700;Dbxref=NCBI_GP:PDP76438.1;Name=PDP76438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964636.1;locus_tag=CLI76_09700;product=XRE family transcriptional regulator;protein_id=PDP76438.1;transl_table=11 NSLT01000065.1 Genbank gene 1400 2197 . + . ID=gene-CLI76_09705;Name=CLI76_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09705 NSLT01000065.1 Protein Homology CDS 1400 2197 . + 0 ID=cds-PDP76439.1;Parent=gene-CLI76_09705;Dbxref=NCBI_GP:PDP76439.1;Name=PDP76439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873635.1;locus_tag=CLI76_09705;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=PDP76439.1;transl_table=11 NSLT01000065.1 Genbank gene 2179 3102 . + . ID=gene-CLI76_09710;Name=CLI76_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09710 NSLT01000065.1 Protein Homology CDS 2179 3102 . + 0 ID=cds-PDP76440.1;Parent=gene-CLI76_09710;Dbxref=NCBI_GP:PDP76440.1;Name=PDP76440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956199.1;locus_tag=CLI76_09710;product=dihydroorotate dehydrogenase B catalytic subunit;protein_id=PDP76440.1;transl_table=11 NSLT01000065.1 Genbank gene 3373 4017 . + . ID=gene-CLI76_09715;Name=CLI76_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09715 NSLT01000065.1 Protein Homology CDS 3373 4017 . + 0 ID=cds-PDP76441.1;Parent=gene-CLI76_09715;Dbxref=NCBI_GP:PDP76441.1;Name=PDP76441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584460.1;locus_tag=CLI76_09715;product=CoA transferase subunit A;protein_id=PDP76441.1;transl_table=11 NSLT01000065.1 Genbank gene 4071 4460 . + . ID=gene-CLI76_09720;Name=CLI76_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09720 NSLT01000065.1 Protein Homology CDS 4071 4460 . + 0 ID=cds-PDP76442.1;Parent=gene-CLI76_09720;Dbxref=NCBI_GP:PDP76442.1;Name=PDP76442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956200.1;locus_tag=CLI76_09720;product=3-aminobutyryl-CoA ammonia lyase;protein_id=PDP76442.1;transl_table=11 NSLT01000065.1 Genbank gene 4488 5309 . + . ID=gene-CLI76_09725;Name=CLI76_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09725 NSLT01000065.1 Protein Homology CDS 4488 5309 . + 0 ID=cds-PDP76443.1;Parent=gene-CLI76_09725;Dbxref=NCBI_GP:PDP76443.1;Name=PDP76443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964631.1;locus_tag=CLI76_09725;product=3-keto-5-aminohexanoate cleavage protein;protein_id=PDP76443.1;transl_table=11 NSLT01000065.1 Genbank gene 5351 6394 . + . ID=gene-CLI76_09730;Name=CLI76_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09730 NSLT01000065.1 Protein Homology CDS 5351 6394 . + 0 ID=cds-PDP76444.1;Parent=gene-CLI76_09730;Dbxref=NCBI_GP:PDP76444.1;Name=PDP76444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007364489.1;locus_tag=CLI76_09730;product=L-erythro-3%2C5-diaminohexanoate dehydrogenase;protein_id=PDP76444.1;transl_table=11 NSLT01000065.1 Genbank gene 6481 7731 . + . ID=gene-CLI76_09735;Name=ablA;gbkey=Gene;gene=ablA;gene_biotype=protein_coding;locus_tag=CLI76_09735 NSLT01000065.1 Protein Homology CDS 6481 7731 . + 0 ID=cds-PDP76445.1;Parent=gene-CLI76_09735;Dbxref=NCBI_GP:PDP76445.1;Name=PDP76445.1;gbkey=CDS;gene=ablA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584456.1;locus_tag=CLI76_09735;product=lysine 2%2C3-aminomutase;protein_id=PDP76445.1;transl_table=11 NSLT01000065.1 Genbank gene 7861 8829 . + . ID=gene-CLI76_09740;Name=CLI76_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09740 NSLT01000065.1 Protein Homology CDS 7861 8829 . + 0 ID=cds-PDP76446.1;Parent=gene-CLI76_09740;Dbxref=NCBI_GP:PDP76446.1;Name=PDP76446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956201.1;locus_tag=CLI76_09740;product=hypothetical protein;protein_id=PDP76446.1;transl_table=11 ##sequence-region NSLT01000066.1 1 8768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000066.1 Genbank region 1 8768 . + . ID=NSLT01000066.1:1..8768;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000066.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_09745;Name=CLI76_09745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09745;pseudo=true NSLT01000066.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_09745;Parent=gene-CLI76_09745;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09745;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000066.1 Genbank gene 637 852 . + . ID=gene-CLI76_09750;Name=CLI76_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09750 NSLT01000066.1 Protein Homology CDS 637 852 . + 0 ID=cds-PDP76430.1;Parent=gene-CLI76_09750;Dbxref=NCBI_GP:PDP76430.1;Name=PDP76430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458522.1;locus_tag=CLI76_09750;product=hypothetical protein;protein_id=PDP76430.1;transl_table=11 NSLT01000066.1 Genbank gene 849 2333 . + . ID=gene-CLI76_09755;Name=CLI76_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09755 NSLT01000066.1 Protein Homology CDS 849 2333 . + 0 ID=cds-PDP76431.1;Parent=gene-CLI76_09755;Dbxref=NCBI_GP:PDP76431.1;Name=PDP76431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583508.1;locus_tag=CLI76_09755;product=DUF3943 domain-containing protein;protein_id=PDP76431.1;transl_table=11 NSLT01000066.1 Genbank gene 2350 4386 . + . ID=gene-CLI76_09760;Name=CLI76_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09760 NSLT01000066.1 Protein Homology CDS 2350 4386 . + 0 ID=cds-PDP76432.1;Parent=gene-CLI76_09760;Dbxref=NCBI_GP:PDP76432.1;Name=PDP76432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815171.1;locus_tag=CLI76_09760;product=peptidase M3;protein_id=PDP76432.1;transl_table=11 NSLT01000066.1 Genbank gene 4506 5708 . - . ID=gene-CLI76_09765;Name=CLI76_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09765 NSLT01000066.1 Protein Homology CDS 4506 5708 . - 0 ID=cds-PDP76433.1;Parent=gene-CLI76_09765;Dbxref=NCBI_GP:PDP76433.1;Name=PDP76433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964538.1;locus_tag=CLI76_09765;product=aminopeptidase;protein_id=PDP76433.1;transl_table=11 NSLT01000066.1 Genbank gene 6306 6455 . - . ID=gene-CLI76_09770;Name=CLI76_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09770 NSLT01000066.1 Protein Homology CDS 6306 6455 . - 0 ID=cds-PDP76434.1;Parent=gene-CLI76_09770;Dbxref=NCBI_GP:PDP76434.1;Name=PDP76434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006254197.1;locus_tag=CLI76_09770;product=DNA methylase;protein_id=PDP76434.1;transl_table=11 NSLT01000066.1 Genbank gene 6480 7565 . - . ID=gene-CLI76_09775;Name=CLI76_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09775 NSLT01000066.1 Protein Homology CDS 6480 7565 . - 0 ID=cds-PDP76435.1;Parent=gene-CLI76_09775;Dbxref=NCBI_GP:PDP76435.1;Name=PDP76435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_09775;product=IS5/IS1182 family transposase;protein_id=PDP76435.1;transl_table=11 NSLT01000066.1 Genbank gene 7670 7849 . - . ID=gene-CLI76_09780;Name=CLI76_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09780 NSLT01000066.1 Protein Homology CDS 7670 7849 . - 0 ID=cds-PDP76436.1;Parent=gene-CLI76_09780;Dbxref=NCBI_GP:PDP76436.1;Name=PDP76436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_09780;product=hypothetical protein;protein_id=PDP76436.1;transl_table=11 NSLT01000066.1 Genbank gene 7979 8768 . - . ID=gene-CLI76_09785;Name=CLI76_09785;end_range=8768,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09785;partial=true NSLT01000066.1 Protein Homology CDS 7979 8768 . - 1 ID=cds-PDP76437.1;Parent=gene-CLI76_09785;Dbxref=NCBI_GP:PDP76437.1;Name=PDP76437.1;end_range=8768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09785;partial=true;product=IS3 family transposase;protein_id=PDP76437.1;transl_table=11 ##sequence-region NSLT01000067.1 1 7911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000067.1 Genbank region 1 7911 . + . ID=NSLT01000067.1:1..7911;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000067.1 Genbank gene 1 142 . - . ID=gene-CLI76_09790;Name=CLI76_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09790;partial=true;start_range=.,1 NSLT01000067.1 Protein Homology CDS 1 142 . - 0 ID=cds-PDP76429.1;Parent=gene-CLI76_09790;Dbxref=NCBI_GP:PDP76429.1;Name=PDP76429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956029.1;locus_tag=CLI76_09790;partial=true;product=IS5/IS1182 family transposase;protein_id=PDP76429.1;start_range=.,1;transl_table=11 NSLT01000067.1 Genbank gene 1333 3963 . + . ID=gene-CLI76_09795;Name=CLI76_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09795 NSLT01000067.1 Protein Homology CDS 1333 3963 . + 0 ID=cds-PDP76423.1;Parent=gene-CLI76_09795;Dbxref=NCBI_GP:PDP76423.1;Name=PDP76423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874783.1;locus_tag=CLI76_09795;product=alanine--tRNA ligase;protein_id=PDP76423.1;transl_table=11 NSLT01000067.1 Genbank gene 3978 5039 . + . ID=gene-CLI76_09800;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CLI76_09800 NSLT01000067.1 Protein Homology CDS 3978 5039 . + 0 ID=cds-PDP76424.1;Parent=gene-CLI76_09800;Dbxref=NCBI_GP:PDP76424.1;Name=PDP76424.1;gbkey=CDS;gene=aroB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584514.1;locus_tag=CLI76_09800;product=3-dehydroquinate synthase;protein_id=PDP76424.1;transl_table=11 NSLT01000067.1 Genbank gene 5075 5149 . + . ID=gene-CLI76_09805;Name=CLI76_09805;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_09805 NSLT01000067.1 tRNAscan-SE tRNA 5075 5149 . + . ID=rna-CLI76_09805;Parent=gene-CLI76_09805;anticodon=(pos:5110..5112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_09805;product=tRNA-Pro NSLT01000067.1 tRNAscan-SE exon 5075 5149 . + . ID=exon-CLI76_09805-1;Parent=rna-CLI76_09805;anticodon=(pos:5110..5112);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_09805;product=tRNA-Pro NSLT01000067.1 Genbank gene 5285 6016 . - . ID=gene-CLI76_09810;Name=CLI76_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09810 NSLT01000067.1 Protein Homology CDS 5285 6016 . - 0 ID=cds-PDP76425.1;Parent=gene-CLI76_09810;Dbxref=NCBI_GP:PDP76425.1;Name=PDP76425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965356.1;locus_tag=CLI76_09810;product=DNA alkylation repair protein;protein_id=PDP76425.1;transl_table=11 NSLT01000067.1 Genbank gene 6031 6792 . - . ID=gene-CLI76_09815;Name=CLI76_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09815 NSLT01000067.1 Protein Homology CDS 6031 6792 . - 0 ID=cds-PDP76426.1;Parent=gene-CLI76_09815;Dbxref=NCBI_GP:PDP76426.1;Name=PDP76426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584577.1;locus_tag=CLI76_09815;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=PDP76426.1;transl_table=11 NSLT01000067.1 Genbank gene 6822 7088 . + . ID=gene-CLI76_09820;Name=CLI76_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09820 NSLT01000067.1 Protein Homology CDS 6822 7088 . + 0 ID=cds-PDP76427.1;Parent=gene-CLI76_09820;Dbxref=NCBI_GP:PDP76427.1;Name=PDP76427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584578.1;locus_tag=CLI76_09820;product=hypothetical protein;protein_id=PDP76427.1;transl_table=11 NSLT01000067.1 Genbank gene 7325 7600 . + . ID=gene-CLI76_09825;Name=CLI76_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09825 NSLT01000067.1 Protein Homology CDS 7325 7600 . + 0 ID=cds-PDP76428.1;Parent=gene-CLI76_09825;Dbxref=NCBI_GP:PDP76428.1;Name=PDP76428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815988.1;locus_tag=CLI76_09825;product=hypothetical protein;protein_id=PDP76428.1;transl_table=11 ##sequence-region NSLT01000068.1 1 7340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000068.1 Genbank region 1 7340 . + . ID=NSLT01000068.1:1..7340;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000068.1 Genbank gene 1 200 . - . ID=gene-CLI76_09830;Name=CLI76_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09830;partial=true;start_range=.,1 NSLT01000068.1 GeneMarkS+ CDS 1 200 . - 0 ID=cds-PDP76416.1;Parent=gene-CLI76_09830;Dbxref=NCBI_GP:PDP76416.1;Name=PDP76416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09830;partial=true;product=hypothetical protein;protein_id=PDP76416.1;start_range=.,1;transl_table=11 NSLT01000068.1 Genbank gene 199 1329 . + . ID=gene-CLI76_09835;Name=CLI76_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09835 NSLT01000068.1 Protein Homology CDS 199 1329 . + 0 ID=cds-PDP76417.1;Parent=gene-CLI76_09835;Dbxref=NCBI_GP:PDP76417.1;Name=PDP76417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585039.1;locus_tag=CLI76_09835;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=PDP76417.1;transl_table=11 NSLT01000068.1 Genbank gene 1346 2428 . + . ID=gene-CLI76_09840;Name=CLI76_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09840 NSLT01000068.1 Protein Homology CDS 1346 2428 . + 0 ID=cds-PDP76418.1;Parent=gene-CLI76_09840;Dbxref=NCBI_GP:PDP76418.1;Name=PDP76418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956046.1;locus_tag=CLI76_09840;product=YjgP/YjgQ family permease;protein_id=PDP76418.1;transl_table=11 NSLT01000068.1 Genbank gene 2461 2922 . + . ID=gene-CLI76_09845;Name=CLI76_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09845 NSLT01000068.1 Protein Homology CDS 2461 2922 . + 0 ID=cds-PDP76419.1;Parent=gene-CLI76_09845;Dbxref=NCBI_GP:PDP76419.1;Name=PDP76419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007657455.1;locus_tag=CLI76_09845;product=SsrA-binding protein;protein_id=PDP76419.1;transl_table=11 NSLT01000068.1 Genbank gene 2962 5133 . + . ID=gene-CLI76_09850;Name=CLI76_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09850 NSLT01000068.1 Protein Homology CDS 2962 5133 . + 0 ID=cds-PDP76420.1;Parent=gene-CLI76_09850;Dbxref=NCBI_GP:PDP76420.1;Name=PDP76420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585042.1;locus_tag=CLI76_09850;product=S9 family peptidase;protein_id=PDP76420.1;transl_table=11 NSLT01000068.1 Genbank gene 5237 6085 . + . ID=gene-CLI76_09855;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CLI76_09855 NSLT01000068.1 Protein Homology CDS 5237 6085 . + 0 ID=cds-PDP76421.1;Parent=gene-CLI76_09855;Dbxref=NCBI_GP:PDP76421.1;Name=PDP76421.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965023.1;locus_tag=CLI76_09855;product=lipoyl synthase;protein_id=PDP76421.1;transl_table=11 NSLT01000068.1 Genbank gene 6338 7340 . + . ID=gene-CLI76_09860;Name=CLI76_09860;end_range=7340,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09860;partial=true NSLT01000068.1 Protein Homology CDS 6338 7340 . + 0 ID=cds-PDP76422.1;Parent=gene-CLI76_09860;Dbxref=NCBI_GP:PDP76422.1;Name=PDP76422.1;end_range=7340,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458292.1;locus_tag=CLI76_09860;partial=true;product=peptidase C25;protein_id=PDP76422.1;transl_table=11 ##sequence-region NSLT01000069.1 1 7246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000069.1 Genbank region 1 7246 . + . ID=NSLT01000069.1:1..7246;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000069.1 Genbank gene 273 1634 . + . ID=gene-CLI76_09865;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI76_09865 NSLT01000069.1 Protein Homology CDS 273 1634 . + 0 ID=cds-PDP76411.1;Parent=gene-CLI76_09865;Dbxref=NCBI_GP:PDP76411.1;Name=PDP76411.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816546.1;locus_tag=CLI76_09865;product=conjugative transposon protein TraM;protein_id=PDP76411.1;transl_table=11 NSLT01000069.1 Genbank gene 1657 2682 . + . ID=gene-CLI76_09870;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI76_09870 NSLT01000069.1 Protein Homology CDS 1657 2682 . + 0 ID=cds-PDP76412.1;Parent=gene-CLI76_09870;Dbxref=NCBI_GP:PDP76412.1;Name=PDP76412.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018362582.1;locus_tag=CLI76_09870;product=conjugative transposon protein TraN;protein_id=PDP76412.1;transl_table=11 NSLT01000069.1 Genbank gene 2676 3254 . + . ID=gene-CLI76_09875;Name=CLI76_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09875 NSLT01000069.1 Protein Homology CDS 2676 3254 . + 0 ID=cds-PDP76413.1;Parent=gene-CLI76_09875;Dbxref=NCBI_GP:PDP76413.1;Name=PDP76413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014226304.1;locus_tag=CLI76_09875;product=conjugal transfer protein TraO;protein_id=PDP76413.1;transl_table=11 NSLT01000069.1 Genbank gene 3267 3731 . + . ID=gene-CLI76_09880;Name=CLI76_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09880 NSLT01000069.1 Protein Homology CDS 3267 3731 . + 0 ID=cds-PDP76414.1;Parent=gene-CLI76_09880;Dbxref=NCBI_GP:PDP76414.1;Name=PDP76414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874645.1;locus_tag=CLI76_09880;product=conjugal transfer protein;protein_id=PDP76414.1;transl_table=11 NSLT01000069.1 Genbank pseudogene 4056 4780 . + . ID=gene-CLI76_09885;Name=CLI76_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09885;pseudo=true NSLT01000069.1 Protein Homology CDS 4056 4780 . + 0 ID=cds-CLI76_09885;Parent=gene-CLI76_09885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004331056.1;locus_tag=CLI76_09885;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000069.1 Genbank gene 5318 7246 . + . ID=gene-CLI76_09890;Name=CLI76_09890;end_range=7246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09890;partial=true NSLT01000069.1 Protein Homology CDS 5318 7246 . + 0 ID=cds-PDP76415.1;Parent=gene-CLI76_09890;Dbxref=NCBI_GP:PDP76415.1;Name=PDP76415.1;end_range=7246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012419383.1;locus_tag=CLI76_09890;partial=true;product=AAA family ATPase;protein_id=PDP76415.1;transl_table=11 ##sequence-region NSLT01000006.1 1 63949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000006.1 Genbank region 1 63949 . + . ID=NSLT01000006.1:1..63949;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000006.1 Genbank gene 320 586 . + . ID=gene-CLI76_01975;Name=CLI76_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01975 NSLT01000006.1 GeneMarkS+ CDS 320 586 . + 0 ID=cds-PDP77806.1;Parent=gene-CLI76_01975;Dbxref=NCBI_GP:PDP77806.1;Name=PDP77806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01975;product=hypothetical protein;protein_id=PDP77806.1;transl_table=11 NSLT01000006.1 Genbank gene 635 1048 . - . ID=gene-CLI76_01980;Name=CLI76_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01980 NSLT01000006.1 GeneMarkS+ CDS 635 1048 . - 0 ID=cds-PDP77807.1;Parent=gene-CLI76_01980;Dbxref=NCBI_GP:PDP77807.1;Name=PDP77807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01980;product=hypothetical protein;protein_id=PDP77807.1;transl_table=11 NSLT01000006.1 Genbank gene 1072 1737 . - . ID=gene-CLI76_01985;Name=CLI76_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01985 NSLT01000006.1 Protein Homology CDS 1072 1737 . - 0 ID=cds-PDP77855.1;Parent=gene-CLI76_01985;Dbxref=NCBI_GP:PDP77855.1;Name=PDP77855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020211423.1;locus_tag=CLI76_01985;product=transcriptional regulator;protein_id=PDP77855.1;transl_table=11 NSLT01000006.1 Genbank gene 1859 2242 . + . ID=gene-CLI76_01990;Name=CLI76_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01990 NSLT01000006.1 GeneMarkS+ CDS 1859 2242 . + 0 ID=cds-PDP77808.1;Parent=gene-CLI76_01990;Dbxref=NCBI_GP:PDP77808.1;Name=PDP77808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01990;product=hypothetical protein;protein_id=PDP77808.1;transl_table=11 NSLT01000006.1 Genbank gene 2255 3085 . + . ID=gene-CLI76_01995;Name=CLI76_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_01995 NSLT01000006.1 GeneMarkS+ CDS 2255 3085 . + 0 ID=cds-PDP77809.1;Parent=gene-CLI76_01995;Dbxref=NCBI_GP:PDP77809.1;Name=PDP77809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_01995;product=chromosome partitioning protein ParB;protein_id=PDP77809.1;transl_table=11 NSLT01000006.1 Genbank gene 3111 5237 . + . ID=gene-CLI76_02000;Name=CLI76_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02000 NSLT01000006.1 Protein Homology CDS 3111 5237 . + 0 ID=cds-PDP77810.1;Parent=gene-CLI76_02000;Dbxref=NCBI_GP:PDP77810.1;Name=PDP77810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=CLI76_02000;product=kinase;protein_id=PDP77810.1;transl_table=11 NSLT01000006.1 Genbank gene 5200 6102 . + . ID=gene-CLI76_02005;Name=CLI76_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02005 NSLT01000006.1 Protein Homology CDS 5200 6102 . + 0 ID=cds-PDP77856.1;Parent=gene-CLI76_02005;Dbxref=NCBI_GP:PDP77856.1;Name=PDP77856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13401.4;locus_tag=CLI76_02005;product=DNA transposition protein;protein_id=PDP77856.1;transl_table=11 NSLT01000006.1 Genbank gene 6156 6827 . + . ID=gene-CLI76_02010;Name=CLI76_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02010 NSLT01000006.1 GeneMarkS+ CDS 6156 6827 . + 0 ID=cds-PDP77811.1;Parent=gene-CLI76_02010;Dbxref=NCBI_GP:PDP77811.1;Name=PDP77811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02010;product=hypothetical protein;protein_id=PDP77811.1;transl_table=11 NSLT01000006.1 Genbank gene 7067 7456 . + . ID=gene-CLI76_02015;Name=CLI76_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02015 NSLT01000006.1 GeneMarkS+ CDS 7067 7456 . + 0 ID=cds-PDP77812.1;Parent=gene-CLI76_02015;Dbxref=NCBI_GP:PDP77812.1;Name=PDP77812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02015;product=hypothetical protein;protein_id=PDP77812.1;transl_table=11 NSLT01000006.1 Genbank gene 7453 7884 . + . ID=gene-CLI76_02020;Name=CLI76_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02020 NSLT01000006.1 Protein Homology CDS 7453 7884 . + 0 ID=cds-PDP77813.1;Parent=gene-CLI76_02020;Dbxref=NCBI_GP:PDP77813.1;Name=PDP77813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008622837.1;locus_tag=CLI76_02020;product=hypothetical protein;protein_id=PDP77813.1;transl_table=11 NSLT01000006.1 Genbank gene 8118 8639 . + . ID=gene-CLI76_02025;Name=CLI76_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02025 NSLT01000006.1 Protein Homology CDS 8118 8639 . + 0 ID=cds-PDP77814.1;Parent=gene-CLI76_02025;Dbxref=NCBI_GP:PDP77814.1;Name=PDP77814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708766.1;locus_tag=CLI76_02025;product=hypothetical protein;protein_id=PDP77814.1;transl_table=11 NSLT01000006.1 Genbank gene 8636 9031 . + . ID=gene-CLI76_02030;Name=CLI76_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02030 NSLT01000006.1 Protein Homology CDS 8636 9031 . + 0 ID=cds-PDP77815.1;Parent=gene-CLI76_02030;Dbxref=NCBI_GP:PDP77815.1;Name=PDP77815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14902.4;locus_tag=CLI76_02030;product=DUF4494 domain-containing protein;protein_id=PDP77815.1;transl_table=11 NSLT01000006.1 Genbank gene 9028 9420 . + . ID=gene-CLI76_02035;Name=CLI76_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02035 NSLT01000006.1 Protein Homology CDS 9028 9420 . + 0 ID=cds-PDP77816.1;Parent=gene-CLI76_02035;Dbxref=NCBI_GP:PDP77816.1;Name=PDP77816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004310123.1;locus_tag=CLI76_02035;product=hypothetical protein;protein_id=PDP77816.1;transl_table=11 NSLT01000006.1 Genbank gene 9521 9880 . - . ID=gene-CLI76_02040;Name=CLI76_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02040 NSLT01000006.1 GeneMarkS+ CDS 9521 9880 . - 0 ID=cds-PDP77817.1;Parent=gene-CLI76_02040;Dbxref=NCBI_GP:PDP77817.1;Name=PDP77817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02040;product=hypothetical protein;protein_id=PDP77817.1;transl_table=11 NSLT01000006.1 Genbank gene 9930 10271 . + . ID=gene-CLI76_02045;Name=CLI76_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02045 NSLT01000006.1 Protein Homology CDS 9930 10271 . + 0 ID=cds-PDP77818.1;Parent=gene-CLI76_02045;Dbxref=NCBI_GP:PDP77818.1;Name=PDP77818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292781.1;locus_tag=CLI76_02045;product=hypothetical protein;protein_id=PDP77818.1;transl_table=11 NSLT01000006.1 Genbank gene 10268 10702 . - . ID=gene-CLI76_02050;Name=CLI76_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02050 NSLT01000006.1 Protein Homology CDS 10268 10702 . - 0 ID=cds-PDP77819.1;Parent=gene-CLI76_02050;Dbxref=NCBI_GP:PDP77819.1;Name=PDP77819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611123.1;locus_tag=CLI76_02050;product=hypothetical protein;protein_id=PDP77819.1;transl_table=11 NSLT01000006.1 Genbank gene 10706 11206 . - . ID=gene-CLI76_02055;Name=CLI76_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02055 NSLT01000006.1 Protein Homology CDS 10706 11206 . - 0 ID=cds-PDP77820.1;Parent=gene-CLI76_02055;Dbxref=NCBI_GP:PDP77820.1;Name=PDP77820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292779.1;locus_tag=CLI76_02055;product=hypothetical protein;protein_id=PDP77820.1;transl_table=11 NSLT01000006.1 Genbank gene 11461 14022 . - . ID=gene-CLI76_02060;Name=CLI76_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02060 NSLT01000006.1 Protein Homology CDS 11461 14022 . - 0 ID=cds-PDP77821.1;Parent=gene-CLI76_02060;Dbxref=NCBI_GP:PDP77821.1;Name=PDP77821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005940356.1;locus_tag=CLI76_02060;product=phage head morphogenesis protein;protein_id=PDP77821.1;transl_table=11 NSLT01000006.1 Genbank gene 14026 14451 . - . ID=gene-CLI76_02065;Name=CLI76_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02065 NSLT01000006.1 Protein Homology CDS 14026 14451 . - 0 ID=cds-PDP77822.1;Parent=gene-CLI76_02065;Dbxref=NCBI_GP:PDP77822.1;Name=PDP77822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611120.1;locus_tag=CLI76_02065;product=DUF1320 domain-containing protein;protein_id=PDP77822.1;transl_table=11 NSLT01000006.1 Genbank gene 14451 16001 . - . ID=gene-CLI76_02070;Name=CLI76_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02070 NSLT01000006.1 GeneMarkS+ CDS 14451 16001 . - 0 ID=cds-PDP77823.1;Parent=gene-CLI76_02070;Dbxref=NCBI_GP:PDP77823.1;Name=PDP77823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02070;product=hypothetical protein;protein_id=PDP77823.1;transl_table=11 NSLT01000006.1 Genbank gene 16004 16453 . - . ID=gene-CLI76_02075;Name=CLI76_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02075 NSLT01000006.1 Protein Homology CDS 16004 16453 . - 0 ID=cds-PDP77824.1;Parent=gene-CLI76_02075;Dbxref=NCBI_GP:PDP77824.1;Name=PDP77824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647416.1;locus_tag=CLI76_02075;product=helix-turn-helix domain-containing protein;protein_id=PDP77824.1;transl_table=11 NSLT01000006.1 Genbank gene 16624 17613 . + . ID=gene-CLI76_02080;Name=CLI76_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02080 NSLT01000006.1 Protein Homology CDS 16624 17613 . + 0 ID=cds-PDP77857.1;Parent=gene-CLI76_02080;Dbxref=NCBI_GP:PDP77857.1;Name=PDP77857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013611118.1;locus_tag=CLI76_02080;product=hypothetical protein;protein_id=PDP77857.1;transl_table=11 NSLT01000006.1 Genbank gene 17631 18536 . + . ID=gene-CLI76_02085;Name=CLI76_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02085 NSLT01000006.1 Protein Homology CDS 17631 18536 . + 0 ID=cds-PDP77825.1;Parent=gene-CLI76_02085;Dbxref=NCBI_GP:PDP77825.1;Name=PDP77825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009292777.1;locus_tag=CLI76_02085;product=hypothetical protein;protein_id=PDP77825.1;transl_table=11 NSLT01000006.1 Genbank gene 18536 19009 . + . ID=gene-CLI76_02090;Name=CLI76_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02090 NSLT01000006.1 Protein Homology CDS 18536 19009 . + 0 ID=cds-PDP77826.1;Parent=gene-CLI76_02090;Dbxref=NCBI_GP:PDP77826.1;Name=PDP77826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005780438.1;locus_tag=CLI76_02090;product=lysozyme;protein_id=PDP77826.1;transl_table=11 NSLT01000006.1 Genbank gene 19014 19403 . + . ID=gene-CLI76_02095;Name=CLI76_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02095 NSLT01000006.1 GeneMarkS+ CDS 19014 19403 . + 0 ID=cds-PDP77827.1;Parent=gene-CLI76_02095;Dbxref=NCBI_GP:PDP77827.1;Name=PDP77827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02095;product=hypothetical protein;protein_id=PDP77827.1;transl_table=11 NSLT01000006.1 Genbank gene 19420 19866 . + . ID=gene-CLI76_02100;Name=CLI76_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02100 NSLT01000006.1 GeneMarkS+ CDS 19420 19866 . + 0 ID=cds-PDP77828.1;Parent=gene-CLI76_02100;Dbxref=NCBI_GP:PDP77828.1;Name=PDP77828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02100;product=hypothetical protein;protein_id=PDP77828.1;transl_table=11 NSLT01000006.1 Genbank gene 20124 20597 . + . ID=gene-CLI76_02105;Name=CLI76_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02105 NSLT01000006.1 GeneMarkS+ CDS 20124 20597 . + 0 ID=cds-PDP77829.1;Parent=gene-CLI76_02105;Dbxref=NCBI_GP:PDP77829.1;Name=PDP77829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02105;product=hypothetical protein;protein_id=PDP77829.1;transl_table=11 NSLT01000006.1 Genbank gene 20597 21076 . + . ID=gene-CLI76_02110;Name=CLI76_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02110 NSLT01000006.1 Protein Homology CDS 20597 21076 . + 0 ID=cds-PDP77830.1;Parent=gene-CLI76_02110;Dbxref=NCBI_GP:PDP77830.1;Name=PDP77830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004358340.1;locus_tag=CLI76_02110;product=hypothetical protein;protein_id=PDP77830.1;transl_table=11 NSLT01000006.1 Genbank gene 21109 21312 . + . ID=gene-CLI76_02115;Name=CLI76_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02115 NSLT01000006.1 Protein Homology CDS 21109 21312 . + 0 ID=cds-PDP77858.1;Parent=gene-CLI76_02115;Dbxref=NCBI_GP:PDP77858.1;Name=PDP77858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005846360.1;locus_tag=CLI76_02115;product=hypothetical protein;protein_id=PDP77858.1;transl_table=11 NSLT01000006.1 Genbank gene 21287 24982 . + . ID=gene-CLI76_02120;Name=CLI76_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02120 NSLT01000006.1 GeneMarkS+ CDS 21287 24982 . + 0 ID=cds-PDP77831.1;Parent=gene-CLI76_02120;Dbxref=NCBI_GP:PDP77831.1;Name=PDP77831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02120;product=hypothetical protein;protein_id=PDP77831.1;transl_table=11 NSLT01000006.1 Genbank gene 24991 25500 . + . ID=gene-CLI76_02125;Name=CLI76_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02125 NSLT01000006.1 Protein Homology CDS 24991 25500 . + 0 ID=cds-PDP77859.1;Parent=gene-CLI76_02125;Dbxref=NCBI_GP:PDP77859.1;Name=PDP77859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007764138.1;locus_tag=CLI76_02125;product=hypothetical protein;protein_id=PDP77859.1;transl_table=11 NSLT01000006.1 Genbank gene 25478 28123 . + . ID=gene-CLI76_02130;Name=CLI76_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02130 NSLT01000006.1 GeneMarkS+ CDS 25478 28123 . + 0 ID=cds-PDP77832.1;Parent=gene-CLI76_02130;Dbxref=NCBI_GP:PDP77832.1;Name=PDP77832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02130;product=hypothetical protein;protein_id=PDP77832.1;transl_table=11 NSLT01000006.1 Genbank gene 28131 29822 . + . ID=gene-CLI76_02135;Name=CLI76_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02135 NSLT01000006.1 GeneMarkS+ CDS 28131 29822 . + 0 ID=cds-PDP77833.1;Parent=gene-CLI76_02135;Dbxref=NCBI_GP:PDP77833.1;Name=PDP77833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02135;product=hypothetical protein;protein_id=PDP77833.1;transl_table=11 NSLT01000006.1 Genbank gene 29829 30026 . + . ID=gene-CLI76_02140;Name=CLI76_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02140 NSLT01000006.1 GeneMarkS+ CDS 29829 30026 . + 0 ID=cds-PDP77834.1;Parent=gene-CLI76_02140;Dbxref=NCBI_GP:PDP77834.1;Name=PDP77834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02140;product=hypothetical protein;protein_id=PDP77834.1;transl_table=11 NSLT01000006.1 Genbank gene 30028 31152 . + . ID=gene-CLI76_02145;Name=CLI76_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02145 NSLT01000006.1 GeneMarkS+ CDS 30028 31152 . + 0 ID=cds-PDP77835.1;Parent=gene-CLI76_02145;Dbxref=NCBI_GP:PDP77835.1;Name=PDP77835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02145;product=hypothetical protein;protein_id=PDP77835.1;transl_table=11 NSLT01000006.1 Genbank gene 31152 32471 . + . ID=gene-CLI76_02150;Name=CLI76_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02150 NSLT01000006.1 GeneMarkS+ CDS 31152 32471 . + 0 ID=cds-PDP77836.1;Parent=gene-CLI76_02150;Dbxref=NCBI_GP:PDP77836.1;Name=PDP77836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02150;product=hypothetical protein;protein_id=PDP77836.1;transl_table=11 NSLT01000006.1 Genbank gene 32634 33386 . + . ID=gene-CLI76_02155;Name=CLI76_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02155 NSLT01000006.1 Protein Homology CDS 32634 33386 . + 0 ID=cds-PDP77837.1;Parent=gene-CLI76_02155;Dbxref=NCBI_GP:PDP77837.1;Name=PDP77837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016268371.1;locus_tag=CLI76_02155;product=hypothetical protein;protein_id=PDP77837.1;transl_table=11 NSLT01000006.1 Genbank gene 33421 33669 . + . ID=gene-CLI76_02160;Name=CLI76_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02160 NSLT01000006.1 GeneMarkS+ CDS 33421 33669 . + 0 ID=cds-PDP77838.1;Parent=gene-CLI76_02160;Dbxref=NCBI_GP:PDP77838.1;Name=PDP77838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02160;product=hypothetical protein;protein_id=PDP77838.1;transl_table=11 NSLT01000006.1 Genbank gene 33914 35911 . + . ID=gene-CLI76_02165;Name=CLI76_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02165 NSLT01000006.1 Protein Homology CDS 33914 35911 . + 0 ID=cds-PDP77839.1;Parent=gene-CLI76_02165;Dbxref=NCBI_GP:PDP77839.1;Name=PDP77839.1;Note=class 3%3B catalyzes the formation of fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457797.1;locus_tag=CLI76_02165;product=fructose-bisphosphatase class III;protein_id=PDP77839.1;transl_table=11 NSLT01000006.1 Genbank gene 36067 38421 . + . ID=gene-CLI76_02170;Name=CLI76_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02170 NSLT01000006.1 Protein Homology CDS 36067 38421 . + 0 ID=cds-PDP77840.1;Parent=gene-CLI76_02170;Dbxref=NCBI_GP:PDP77840.1;Name=PDP77840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457798.1;locus_tag=CLI76_02170;product=penicillin-binding protein;protein_id=PDP77840.1;transl_table=11 NSLT01000006.1 Genbank gene 38469 39179 . + . ID=gene-CLI76_02175;Name=CLI76_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02175 NSLT01000006.1 Protein Homology CDS 38469 39179 . + 0 ID=cds-PDP77841.1;Parent=gene-CLI76_02175;Dbxref=NCBI_GP:PDP77841.1;Name=PDP77841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585333.1;locus_tag=CLI76_02175;product=BAX inhibitor (BI)-1/YccA family protein;protein_id=PDP77841.1;transl_table=11 NSLT01000006.1 Genbank gene 39279 42056 . - . ID=gene-CLI76_02180;Name=CLI76_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02180 NSLT01000006.1 Protein Homology CDS 39279 42056 . - 0 ID=cds-PDP77842.1;Parent=gene-CLI76_02180;Dbxref=NCBI_GP:PDP77842.1;Name=PDP77842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585334.1;locus_tag=CLI76_02180;product=leucine--tRNA ligase;protein_id=PDP77842.1;transl_table=11 NSLT01000006.1 Genbank gene 42550 42747 . + . ID=gene-CLI76_02185;Name=CLI76_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02185 NSLT01000006.1 Protein Homology CDS 42550 42747 . + 0 ID=cds-PDP77860.1;Parent=gene-CLI76_02185;Dbxref=NCBI_GP:PDP77860.1;Name=PDP77860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815891.1;locus_tag=CLI76_02185;product=hypothetical protein;protein_id=PDP77860.1;transl_table=11 NSLT01000006.1 Genbank pseudogene 43074 43258 . + . ID=gene-CLI76_02190;Name=CLI76_02190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02190;pseudo=true NSLT01000006.1 Protein Homology CDS 43074 43258 . + 0 ID=cds-CLI76_02190;Parent=gene-CLI76_02190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875023.1;locus_tag=CLI76_02190;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000006.1 Genbank gene 43270 43342 . - . ID=gene-CLI76_02195;Name=CLI76_02195;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_02195 NSLT01000006.1 tRNAscan-SE tRNA 43270 43342 . - . ID=rna-CLI76_02195;Parent=gene-CLI76_02195;anticodon=(pos:complement(43307..43309));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02195;product=tRNA-Gly NSLT01000006.1 tRNAscan-SE exon 43270 43342 . - . ID=exon-CLI76_02195-1;Parent=rna-CLI76_02195;anticodon=(pos:complement(43307..43309));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02195;product=tRNA-Gly NSLT01000006.1 Genbank gene 43408 44967 . - . ID=gene-CLI76_02200;Name=CLI76_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02200 NSLT01000006.1 Protein Homology CDS 43408 44967 . - 0 ID=cds-PDP77843.1;Parent=gene-CLI76_02200;Dbxref=NCBI_GP:PDP77843.1;Name=PDP77843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457804.1;locus_tag=CLI76_02200;product=FAD-binding protein;protein_id=PDP77843.1;transl_table=11 NSLT01000006.1 Genbank gene 44952 46403 . - . ID=gene-CLI76_02205;Name=CLI76_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02205 NSLT01000006.1 Protein Homology CDS 44952 46403 . - 0 ID=cds-PDP77844.1;Parent=gene-CLI76_02205;Dbxref=NCBI_GP:PDP77844.1;Name=PDP77844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964392.1;locus_tag=CLI76_02205;product=tRNA nucleotidyltransferase;protein_id=PDP77844.1;transl_table=11 NSLT01000006.1 Genbank pseudogene 46536 46874 . - . ID=gene-CLI76_02210;Name=CLI76_02210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02210;pseudo=true NSLT01000006.1 Protein Homology CDS 46536 46874 . - 0 ID=cds-CLI76_02210;Parent=gene-CLI76_02210;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457908.1;locus_tag=CLI76_02210;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000006.1 Genbank gene 47109 48458 . - . ID=gene-CLI76_02215;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CLI76_02215 NSLT01000006.1 Protein Homology CDS 47109 48458 . - 0 ID=cds-PDP77845.1;Parent=gene-CLI76_02215;Dbxref=NCBI_GP:PDP77845.1;Name=PDP77845.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585339.1;locus_tag=CLI76_02215;product=dihydrolipoyl dehydrogenase;protein_id=PDP77845.1;transl_table=11 NSLT01000006.1 Genbank gene 48463 49254 . - . ID=gene-CLI76_02220;Name=CLI76_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02220 NSLT01000006.1 Protein Homology CDS 48463 49254 . - 0 ID=cds-PDP77846.1;Parent=gene-CLI76_02220;Dbxref=NCBI_GP:PDP77846.1;Name=PDP77846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007655151.1;locus_tag=CLI76_02220;product=glucosamine-6-phosphate deaminase;protein_id=PDP77846.1;transl_table=11 NSLT01000006.1 Genbank gene 49293 50504 . - . ID=gene-CLI76_02225;Name=CLI76_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02225 NSLT01000006.1 Protein Homology CDS 49293 50504 . - 0 ID=cds-PDP77847.1;Parent=gene-CLI76_02225;Dbxref=NCBI_GP:PDP77847.1;Name=PDP77847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585341.1;locus_tag=CLI76_02225;product=FprA family A-type flavoprotein;protein_id=PDP77847.1;transl_table=11 NSLT01000006.1 Genbank gene 50535 51386 . - . ID=gene-CLI76_02230;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CLI76_02230 NSLT01000006.1 Protein Homology CDS 50535 51386 . - 0 ID=cds-PDP77848.1;Parent=gene-CLI76_02230;Dbxref=NCBI_GP:PDP77848.1;Name=PDP77848.1;gbkey=CDS;gene=lgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816484.1;locus_tag=CLI76_02230;product=prolipoprotein diacylglyceryl transferase;protein_id=PDP77848.1;transl_table=11 NSLT01000006.1 Genbank gene 51423 52328 . - . ID=gene-CLI76_02235;Name=CLI76_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02235 NSLT01000006.1 Protein Homology CDS 51423 52328 . - 0 ID=cds-PDP77849.1;Parent=gene-CLI76_02235;Dbxref=NCBI_GP:PDP77849.1;Name=PDP77849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816485.1;locus_tag=CLI76_02235;product=diaminopimelate dehydrogenase;protein_id=PDP77849.1;transl_table=11 NSLT01000006.1 Genbank gene 52366 53412 . - . ID=gene-CLI76_02240;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CLI76_02240 NSLT01000006.1 Protein Homology CDS 52366 53412 . - 0 ID=cds-PDP77850.1;Parent=gene-CLI76_02240;Dbxref=NCBI_GP:PDP77850.1;Name=PDP77850.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964385.1;locus_tag=CLI76_02240;product=transcription antitermination factor NusB;protein_id=PDP77850.1;transl_table=11 NSLT01000006.1 Genbank pseudogene 53461 53724 . - . ID=gene-CLI76_02245;Name=CLI76_02245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02245;pseudo=true NSLT01000006.1 Protein Homology CDS 53461 53724 . - 0 ID=cds-CLI76_02245;Parent=gene-CLI76_02245;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI76_02245;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000006.1 Genbank gene 54053 61552 . - . ID=gene-CLI76_02250;Name=sprA;gbkey=Gene;gene=sprA;gene_biotype=protein_coding;locus_tag=CLI76_02250 NSLT01000006.1 Protein Homology CDS 54053 61552 . - 0 ID=cds-PDP77851.1;Parent=gene-CLI76_02250;Dbxref=NCBI_GP:PDP77851.1;Name=PDP77851.1;gbkey=CDS;gene=sprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457811.1;locus_tag=CLI76_02250;product=cell surface protein SprA;protein_id=PDP77851.1;transl_table=11 NSLT01000006.1 Genbank gene 61592 62200 . - . ID=gene-CLI76_02255;Name=CLI76_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02255 NSLT01000006.1 Protein Homology CDS 61592 62200 . - 0 ID=cds-PDP77852.1;Parent=gene-CLI76_02255;Dbxref=NCBI_GP:PDP77852.1;Name=PDP77852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457812.1;locus_tag=CLI76_02255;product=Holliday junction branch migration protein RuvA;protein_id=PDP77852.1;transl_table=11 NSLT01000006.1 Genbank gene 62636 63208 . - . ID=gene-CLI76_02260;Name=CLI76_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02260 NSLT01000006.1 Protein Homology CDS 62636 63208 . - 0 ID=cds-PDP77853.1;Parent=gene-CLI76_02260;Dbxref=NCBI_GP:PDP77853.1;Name=PDP77853.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01609.19;locus_tag=CLI76_02260;product=hypothetical protein;protein_id=PDP77853.1;transl_table=11 NSLT01000006.1 Genbank gene 63124 63783 . - . ID=gene-CLI76_02265;Name=CLI76_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02265 NSLT01000006.1 Protein Homology CDS 63124 63783 . - 0 ID=cds-PDP77854.1;Parent=gene-CLI76_02265;Dbxref=NCBI_GP:PDP77854.1;Name=PDP77854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05598.9;locus_tag=CLI76_02265;product=hypothetical protein;protein_id=PDP77854.1;transl_table=11 NSLT01000006.1 Genbank gene 63836 63949 . - . ID=gene-CLI76_02270;Name=CLI76_02270;end_range=63949,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02270;partial=true NSLT01000006.1 Protein Homology CDS 63836 63949 . - 0 ID=cds-PDP77861.1;Parent=gene-CLI76_02270;Dbxref=NCBI_GP:PDP77861.1;Name=PDP77861.1;end_range=63949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_02270;partial=true;product=IS982 family transposase;protein_id=PDP77861.1;transl_table=11 ##sequence-region NSLT01000070.1 1 7188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000070.1 Genbank region 1 7188 . + . ID=NSLT01000070.1:1..7188;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000070.1 Genbank gene 1 1892 . + . ID=gene-CLI76_09895;Name=CLI76_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09895;partial=true;start_range=.,1 NSLT01000070.1 Protein Homology CDS 1 1892 . + 2 ID=cds-PDP76407.1;Parent=gene-CLI76_09895;Dbxref=NCBI_GP:PDP76407.1;Name=PDP76407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_09895;partial=true;product=hemagglutinin;protein_id=PDP76407.1;start_range=.,1;transl_table=11 NSLT01000070.1 Genbank pseudogene 2315 2452 . + . ID=gene-CLI76_09900;Name=CLI76_09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09900;pseudo=true NSLT01000070.1 Protein Homology CDS 2315 2452 . + 0 ID=cds-CLI76_09900;Parent=gene-CLI76_09900;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966134.1;locus_tag=CLI76_09900;product=metalloprotease;pseudo=true;transl_table=11 NSLT01000070.1 Genbank gene 2547 3470 . + . ID=gene-CLI76_09905;Name=CLI76_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09905 NSLT01000070.1 Protein Homology CDS 2547 3470 . + 0 ID=cds-PDP76408.1;Parent=gene-CLI76_09905;Dbxref=NCBI_GP:PDP76408.1;Name=PDP76408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458490.1;locus_tag=CLI76_09905;product=DUF2156 domain-containing protein;protein_id=PDP76408.1;transl_table=11 NSLT01000070.1 Genbank gene 3451 4470 . + . ID=gene-CLI76_09910;Name=CLI76_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09910 NSLT01000070.1 Protein Homology CDS 3451 4470 . + 0 ID=cds-PDP76409.1;Parent=gene-CLI76_09910;Dbxref=NCBI_GP:PDP76409.1;Name=PDP76409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018966132.1;locus_tag=CLI76_09910;product=GNAT family N-acetyltransferase;protein_id=PDP76409.1;transl_table=11 NSLT01000070.1 Genbank gene 4918 7188 . + . ID=gene-CLI76_09915;Name=CLI76_09915;end_range=7188,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09915;partial=true NSLT01000070.1 Protein Homology CDS 4918 7188 . + 0 ID=cds-PDP76410.1;Parent=gene-CLI76_09915;Dbxref=NCBI_GP:PDP76410.1;Name=PDP76410.1;end_range=7188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458488.1;locus_tag=CLI76_09915;partial=true;product=peptidase C25;protein_id=PDP76410.1;transl_table=11 ##sequence-region NSLT01000071.1 1 7155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000071.1 Genbank region 1 7155 . + . ID=NSLT01000071.1:1..7155;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000071.1 Genbank gene 1 1816 . - . ID=gene-CLI76_09920;Name=CLI76_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09920;partial=true;start_range=.,1 NSLT01000071.1 Protein Homology CDS 1 1816 . - 0 ID=cds-PDP76406.1;Parent=gene-CLI76_09920;Dbxref=NCBI_GP:PDP76406.1;Name=PDP76406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458492.1;locus_tag=CLI76_09920;partial=true;product=hemagglutinin;protein_id=PDP76406.1;start_range=.,1;transl_table=11 NSLT01000071.1 Genbank gene 2198 3433 . - . ID=gene-CLI76_09925;Name=CLI76_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09925 NSLT01000071.1 Protein Homology CDS 2198 3433 . - 0 ID=cds-PDP76401.1;Parent=gene-CLI76_09925;Dbxref=NCBI_GP:PDP76401.1;Name=PDP76401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874124.1;locus_tag=CLI76_09925;product=MFS transporter;protein_id=PDP76401.1;transl_table=11 NSLT01000071.1 Genbank gene 3536 4903 . - . ID=gene-CLI76_09930;Name=CLI76_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09930 NSLT01000071.1 Protein Homology CDS 3536 4903 . - 0 ID=cds-PDP76402.1;Parent=gene-CLI76_09930;Dbxref=NCBI_GP:PDP76402.1;Name=PDP76402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458494.1;locus_tag=CLI76_09930;product=hypothetical protein;protein_id=PDP76402.1;transl_table=11 NSLT01000071.1 Genbank gene 5006 5821 . - . ID=gene-CLI76_09935;Name=CLI76_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09935 NSLT01000071.1 Protein Homology CDS 5006 5821 . - 0 ID=cds-PDP76403.1;Parent=gene-CLI76_09935;Dbxref=NCBI_GP:PDP76403.1;Name=PDP76403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874138.1;locus_tag=CLI76_09935;product=glycogen synthase;protein_id=PDP76403.1;transl_table=11 NSLT01000071.1 Genbank gene 5789 6040 . + . ID=gene-CLI76_09940;Name=CLI76_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09940 NSLT01000071.1 Protein Homology CDS 5789 6040 . + 0 ID=cds-PDP76404.1;Parent=gene-CLI76_09940;Dbxref=NCBI_GP:PDP76404.1;Name=PDP76404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583453.1;locus_tag=CLI76_09940;product=hypothetical protein;protein_id=PDP76404.1;transl_table=11 NSLT01000071.1 Genbank gene 6366 7155 . - . ID=gene-CLI76_09945;Name=CLI76_09945;end_range=7155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09945;partial=true NSLT01000071.1 Protein Homology CDS 6366 7155 . - 1 ID=cds-PDP76405.1;Parent=gene-CLI76_09945;Dbxref=NCBI_GP:PDP76405.1;Name=PDP76405.1;end_range=7155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_09945;partial=true;product=IS3 family transposase;protein_id=PDP76405.1;transl_table=11 ##sequence-region NSLT01000072.1 1 7152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000072.1 Genbank region 1 7152 . + . ID=NSLT01000072.1:1..7152;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000072.1 Genbank pseudogene 132 257 . - . ID=gene-CLI76_09950;Name=CLI76_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09950;pseudo=true NSLT01000072.1 Protein Homology CDS 132 257 . - 0 ID=cds-CLI76_09950;Parent=gene-CLI76_09950;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815670.1;locus_tag=CLI76_09950;product=integrase;pseudo=true;transl_table=11 NSLT01000072.1 Genbank gene 334 987 . - . ID=gene-CLI76_09955;Name=CLI76_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09955 NSLT01000072.1 Protein Homology CDS 334 987 . - 0 ID=cds-PDP76393.1;Parent=gene-CLI76_09955;Dbxref=NCBI_GP:PDP76393.1;Name=PDP76393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816621.1;locus_tag=CLI76_09955;product=threonine transporter RhtB;protein_id=PDP76393.1;transl_table=11 NSLT01000072.1 Genbank gene 1171 2310 . - . ID=gene-CLI76_09960;Name=CLI76_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09960 NSLT01000072.1 Protein Homology CDS 1171 2310 . - 0 ID=cds-PDP76394.1;Parent=gene-CLI76_09960;Dbxref=NCBI_GP:PDP76394.1;Name=PDP76394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816622.1;locus_tag=CLI76_09960;product=porin;protein_id=PDP76394.1;transl_table=11 NSLT01000072.1 Genbank gene 2270 3019 . - . ID=gene-CLI76_09965;Name=CLI76_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09965 NSLT01000072.1 Protein Homology CDS 2270 3019 . - 0 ID=cds-PDP76395.1;Parent=gene-CLI76_09965;Dbxref=NCBI_GP:PDP76395.1;Name=PDP76395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965378.1;locus_tag=CLI76_09965;product=ABC transporter permease;protein_id=PDP76395.1;transl_table=11 NSLT01000072.1 Genbank gene 3016 3714 . - . ID=gene-CLI76_09970;Name=CLI76_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09970 NSLT01000072.1 Protein Homology CDS 3016 3714 . - 0 ID=cds-PDP76396.1;Parent=gene-CLI76_09970;Dbxref=NCBI_GP:PDP76396.1;Name=PDP76396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457832.1;locus_tag=CLI76_09970;product=ABC transporter ATP-binding protein;protein_id=PDP76396.1;transl_table=11 NSLT01000072.1 Genbank gene 3766 4704 . - . ID=gene-CLI76_09975;Name=CLI76_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09975 NSLT01000072.1 Protein Homology CDS 3766 4704 . - 0 ID=cds-PDP76397.1;Parent=gene-CLI76_09975;Dbxref=NCBI_GP:PDP76397.1;Name=PDP76397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585466.1;locus_tag=CLI76_09975;product=ABC transporter substrate-binding protein;protein_id=PDP76397.1;transl_table=11 NSLT01000072.1 Genbank gene 4831 5976 . + . ID=gene-CLI76_09980;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CLI76_09980 NSLT01000072.1 Protein Homology CDS 4831 5976 . + 0 ID=cds-PDP76398.1;Parent=gene-CLI76_09980;Dbxref=NCBI_GP:PDP76398.1;Name=PDP76398.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816624.1;locus_tag=CLI76_09980;product=A/G-specific adenine glycosylase;protein_id=PDP76398.1;transl_table=11 NSLT01000072.1 Genbank gene 6377 6670 . + . ID=gene-CLI76_09985;Name=CLI76_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09985 NSLT01000072.1 GeneMarkS+ CDS 6377 6670 . + 0 ID=cds-PDP76399.1;Parent=gene-CLI76_09985;Dbxref=NCBI_GP:PDP76399.1;Name=PDP76399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09985;product=hypothetical protein;protein_id=PDP76399.1;transl_table=11 NSLT01000072.1 Genbank gene 6667 7065 . + . ID=gene-CLI76_09990;Name=CLI76_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_09990 NSLT01000072.1 GeneMarkS+ CDS 6667 7065 . + 0 ID=cds-PDP76400.1;Parent=gene-CLI76_09990;Dbxref=NCBI_GP:PDP76400.1;Name=PDP76400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_09990;product=hypothetical protein;protein_id=PDP76400.1;transl_table=11 ##sequence-region NSLT01000073.1 1 6570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000073.1 Genbank region 1 6570 . + . ID=NSLT01000073.1:1..6570;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000073.1 Genbank pseudogene 156 2879 . - . ID=gene-CLI76_09995;Name=CLI76_09995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_09995;pseudo=true NSLT01000073.1 Protein Homology CDS 156 2879 . - 0 ID=cds-CLI76_09995;Parent=gene-CLI76_09995;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009236106.1;locus_tag=CLI76_09995;product=helicase;pseudo=true;transl_table=11 NSLT01000073.1 Genbank pseudogene 3317 5400 . - . ID=gene-CLI76_10000;Name=CLI76_10000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10000;pseudo=true NSLT01000073.1 Protein Homology CDS 3317 5400 . - 0 ID=cds-CLI76_10000;Parent=gene-CLI76_10000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964968.1;locus_tag=CLI76_10000;product=DNA topoisomerase III;pseudo=true;transl_table=11 NSLT01000073.1 Genbank gene 5714 6570 . - . ID=gene-CLI76_10005;Name=CLI76_10005;end_range=6570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10005;partial=true NSLT01000073.1 Protein Homology CDS 5714 6570 . - 2 ID=cds-PDP76392.1;Parent=gene-CLI76_10005;Dbxref=NCBI_GP:PDP76392.1;Name=PDP76392.1;end_range=6570,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338306.1;locus_tag=CLI76_10005;partial=true;product=hypothetical protein;protein_id=PDP76392.1;transl_table=11 ##sequence-region NSLT01000074.1 1 5956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000074.1 Genbank region 1 5956 . + . ID=NSLT01000074.1:1..5956;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000074.1 Genbank gene 1 5290 . - . ID=gene-CLI76_10010;Name=CLI76_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10010;partial=true;start_range=.,1 NSLT01000074.1 Protein Homology CDS 1 5290 . - 0 ID=cds-PDP76390.1;Parent=gene-CLI76_10010;Dbxref=NCBI_GP:PDP76390.1;Name=PDP76390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955943.1;locus_tag=CLI76_10010;partial=true;product=hypothetical protein;protein_id=PDP76390.1;start_range=.,1;transl_table=11 NSLT01000074.1 Genbank gene 5469 5956 . - . ID=gene-CLI76_10015;Name=CLI76_10015;end_range=5956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10015;partial=true NSLT01000074.1 Protein Homology CDS 5469 5956 . - 2 ID=cds-PDP76391.1;Parent=gene-CLI76_10015;Dbxref=NCBI_GP:PDP76391.1;Name=PDP76391.1;end_range=5956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955943.1;locus_tag=CLI76_10015;partial=true;product=VWA domain-containing protein;protein_id=PDP76391.1;transl_table=11 ##sequence-region NSLT01000075.1 1 5918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000075.1 Genbank region 1 5918 . + . ID=NSLT01000075.1:1..5918;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000075.1 Genbank pseudogene 11 373 . - . ID=gene-CLI76_10020;Name=CLI76_10020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10020;pseudo=true NSLT01000075.1 Protein Homology CDS 11 373 . - 0 ID=cds-CLI76_10020;Parent=gene-CLI76_10020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10020;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000075.1 Genbank pseudogene 392 919 . + . ID=gene-CLI76_10025;Name=traK;gbkey=Gene;gene=traK;gene_biotype=pseudogene;locus_tag=CLI76_10025;pseudo=true NSLT01000075.1 Protein Homology CDS 392 919 . + 0 ID=cds-CLI76_10025;Parent=gene-CLI76_10025;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018968335.1;locus_tag=CLI76_10025;product=conjugative transposon protein TraK;pseudo=true;transl_table=11 NSLT01000075.1 Genbank gene 943 1224 . + . ID=gene-CLI76_10030;Name=CLI76_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10030 NSLT01000075.1 Protein Homology CDS 943 1224 . + 0 ID=cds-PDP76382.1;Parent=gene-CLI76_10030;Dbxref=NCBI_GP:PDP76382.1;Name=PDP76382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018357857.1;locus_tag=CLI76_10030;product=hypothetical protein;protein_id=PDP76382.1;transl_table=11 NSLT01000075.1 Genbank gene 1197 2453 . + . ID=gene-CLI76_10035;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=CLI76_10035 NSLT01000075.1 Protein Homology CDS 1197 2453 . + 0 ID=cds-PDP76383.1;Parent=gene-CLI76_10035;Dbxref=NCBI_GP:PDP76383.1;Name=PDP76383.1;gbkey=CDS;gene=traM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009236096.1;locus_tag=CLI76_10035;product=conjugative transposon protein TraM;protein_id=PDP76383.1;transl_table=11 NSLT01000075.1 Genbank gene 2478 3431 . + . ID=gene-CLI76_10040;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=CLI76_10040 NSLT01000075.1 Protein Homology CDS 2478 3431 . + 0 ID=cds-PDP76384.1;Parent=gene-CLI76_10040;Dbxref=NCBI_GP:PDP76384.1;Name=PDP76384.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019036909.1;locus_tag=CLI76_10040;product=conjugative transposon protein TraN;protein_id=PDP76384.1;transl_table=11 NSLT01000075.1 Genbank gene 3437 4021 . + . ID=gene-CLI76_10045;Name=CLI76_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10045 NSLT01000075.1 Protein Homology CDS 3437 4021 . + 0 ID=cds-PDP76388.1;Parent=gene-CLI76_10045;Dbxref=NCBI_GP:PDP76388.1;Name=PDP76388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009229086.1;locus_tag=CLI76_10045;product=conjugal transfer protein TraO;protein_id=PDP76388.1;transl_table=11 NSLT01000075.1 Genbank gene 4033 4494 . + . ID=gene-CLI76_10050;Name=CLI76_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10050 NSLT01000075.1 Protein Homology CDS 4033 4494 . + 0 ID=cds-PDP76385.1;Parent=gene-CLI76_10050;Dbxref=NCBI_GP:PDP76385.1;Name=PDP76385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338364.1;locus_tag=CLI76_10050;product=conjugal transfer protein;protein_id=PDP76385.1;transl_table=11 NSLT01000075.1 Genbank gene 4506 5012 . + . ID=gene-CLI76_10055;Name=CLI76_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10055 NSLT01000075.1 Protein Homology CDS 4506 5012 . + 0 ID=cds-PDP76386.1;Parent=gene-CLI76_10055;Dbxref=NCBI_GP:PDP76386.1;Name=PDP76386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013265764.1;locus_tag=CLI76_10055;product=lysozyme;protein_id=PDP76386.1;transl_table=11 NSLT01000075.1 Genbank gene 5128 5490 . + . ID=gene-CLI76_10060;Name=CLI76_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10060 NSLT01000075.1 Protein Homology CDS 5128 5490 . + 0 ID=cds-PDP76387.1;Parent=gene-CLI76_10060;Dbxref=NCBI_GP:PDP76387.1;Name=PDP76387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014798160.1;locus_tag=CLI76_10060;product=hypothetical protein;protein_id=PDP76387.1;transl_table=11 NSLT01000075.1 Genbank gene 5493 5918 . + . ID=gene-CLI76_10065;Name=CLI76_10065;end_range=5918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10065;partial=true NSLT01000075.1 Protein Homology CDS 5493 5918 . + 0 ID=cds-PDP76389.1;Parent=gene-CLI76_10065;Dbxref=NCBI_GP:PDP76389.1;Name=PDP76389.1;end_range=5918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007566722.1;locus_tag=CLI76_10065;partial=true;product=peptidase C14;protein_id=PDP76389.1;transl_table=11 ##sequence-region NSLT01000076.1 1 5855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000076.1 Genbank region 1 5855 . + . ID=NSLT01000076.1:1..5855;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000076.1 Genbank gene 3 113 . - . ID=gene-CLI76_10070;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI76_10070 NSLT01000076.1 cmsearch rRNA 3 113 . - . ID=rna-CLI76_10070;Parent=gene-CLI76_10070;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10070;product=5S ribosomal RNA NSLT01000076.1 cmsearch exon 3 113 . - . ID=exon-CLI76_10070-1;Parent=rna-CLI76_10070;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10070;product=5S ribosomal RNA NSLT01000076.1 Genbank gene 204 3104 . - . ID=gene-CLI76_10075;Name=CLI76_10075;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI76_10075 NSLT01000076.1 Genbank rRNA 204 3104 . - . ID=rna-CLI76_10075;Parent=gene-CLI76_10075;gbkey=rRNA;locus_tag=CLI76_10075;product=23S ribosomal RNA NSLT01000076.1 Genbank exon 204 3104 . - . ID=exon-CLI76_10075-1;Parent=rna-CLI76_10075;gbkey=rRNA;locus_tag=CLI76_10075;product=23S ribosomal RNA NSLT01000076.1 Genbank gene 3215 3291 . - . ID=gene-CLI76_10080;Name=CLI76_10080;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_10080 NSLT01000076.1 tRNAscan-SE tRNA 3215 3291 . - . ID=rna-CLI76_10080;Parent=gene-CLI76_10080;anticodon=(pos:complement(3255..3257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_10080;product=tRNA-Ala NSLT01000076.1 tRNAscan-SE exon 3215 3291 . - . ID=exon-CLI76_10080-1;Parent=rna-CLI76_10080;anticodon=(pos:complement(3255..3257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_10080;product=tRNA-Ala NSLT01000076.1 Genbank gene 3293 3366 . - . ID=gene-CLI76_10085;Name=CLI76_10085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_10085 NSLT01000076.1 tRNAscan-SE tRNA 3293 3366 . - . ID=rna-CLI76_10085;Parent=gene-CLI76_10085;anticodon=(pos:complement(3330..3332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_10085;product=tRNA-Ile NSLT01000076.1 tRNAscan-SE exon 3293 3366 . - . ID=exon-CLI76_10085-1;Parent=rna-CLI76_10085;anticodon=(pos:complement(3330..3332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_10085;product=tRNA-Ile NSLT01000076.1 Genbank gene 3865 5406 . - . ID=gene-CLI76_10090;Name=CLI76_10090;gbkey=Gene;gene_biotype=rRNA;locus_tag=CLI76_10090 NSLT01000076.1 Genbank rRNA 3865 5406 . - . ID=rna-CLI76_10090;Parent=gene-CLI76_10090;gbkey=rRNA;locus_tag=CLI76_10090;product=16S ribosomal RNA NSLT01000076.1 Genbank exon 3865 5406 . - . ID=exon-CLI76_10090-1;Parent=rna-CLI76_10090;gbkey=rRNA;locus_tag=CLI76_10090;product=16S ribosomal RNA ##sequence-region NSLT01000077.1 1 5711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000077.1 Genbank region 1 5711 . + . ID=NSLT01000077.1:1..5711;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000077.1 Genbank gene 1 591 . + . ID=gene-CLI76_10095;Name=CLI76_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10095;partial=true;start_range=.,1 NSLT01000077.1 Protein Homology CDS 1 591 . + 0 ID=cds-PDP76375.1;Parent=gene-CLI76_10095;Dbxref=NCBI_GP:PDP76375.1;Name=PDP76375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457345.1;locus_tag=CLI76_10095;partial=true;product=hypothetical protein;protein_id=PDP76375.1;start_range=.,1;transl_table=11 NSLT01000077.1 Genbank gene 601 1659 . + . ID=gene-CLI76_10100;Name=CLI76_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10100 NSLT01000077.1 Protein Homology CDS 601 1659 . + 0 ID=cds-PDP76376.1;Parent=gene-CLI76_10100;Dbxref=NCBI_GP:PDP76376.1;Name=PDP76376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457346.1;locus_tag=CLI76_10100;product=glycosyl transferase family 1;protein_id=PDP76376.1;transl_table=11 NSLT01000077.1 Genbank gene 1672 3006 . + . ID=gene-CLI76_10105;Name=CLI76_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10105 NSLT01000077.1 Protein Homology CDS 1672 3006 . + 0 ID=cds-PDP76377.1;Parent=gene-CLI76_10105;Dbxref=NCBI_GP:PDP76377.1;Name=PDP76377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815374.1;locus_tag=CLI76_10105;product=CoF synthetase;protein_id=PDP76377.1;transl_table=11 NSLT01000077.1 Genbank gene 3301 3786 . + . ID=gene-CLI76_10110;Name=CLI76_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10110 NSLT01000077.1 Protein Homology CDS 3301 3786 . + 0 ID=cds-PDP76378.1;Parent=gene-CLI76_10110;Dbxref=NCBI_GP:PDP76378.1;Name=PDP76378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457348.1;locus_tag=CLI76_10110;product=histidinol phosphate phosphatase;protein_id=PDP76378.1;transl_table=11 NSLT01000077.1 Genbank gene 3906 4343 . + . ID=gene-CLI76_10115;Name=CLI76_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10115 NSLT01000077.1 Protein Homology CDS 3906 4343 . + 0 ID=cds-PDP76379.1;Parent=gene-CLI76_10115;Dbxref=NCBI_GP:PDP76379.1;Name=PDP76379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457349.1;locus_tag=CLI76_10115;product=serine acetyltransferase;protein_id=PDP76379.1;transl_table=11 NSLT01000077.1 Genbank gene 4337 5521 . + . ID=gene-CLI76_10120;Name=CLI76_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10120 NSLT01000077.1 Protein Homology CDS 4337 5521 . + 0 ID=cds-PDP76380.1;Parent=gene-CLI76_10120;Dbxref=NCBI_GP:PDP76380.1;Name=PDP76380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875344.1;locus_tag=CLI76_10120;product=delta-aminolevulinic acid dehydratase;protein_id=PDP76380.1;transl_table=11 NSLT01000077.1 Genbank gene 5542 5711 . + . ID=gene-CLI76_10125;Name=CLI76_10125;end_range=5711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10125;partial=true NSLT01000077.1 Protein Homology CDS 5542 5711 . + 0 ID=cds-PDP76381.1;Parent=gene-CLI76_10125;Dbxref=NCBI_GP:PDP76381.1;Name=PDP76381.1;end_range=5711,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457351.1;locus_tag=CLI76_10125;partial=true;product=glycosyl transferase family 2;protein_id=PDP76381.1;transl_table=11 ##sequence-region NSLT01000078.1 1 5360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000078.1 Genbank region 1 5360 . + . ID=NSLT01000078.1:1..5360;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000078.1 Genbank gene 489 1112 . - . ID=gene-CLI76_10130;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=CLI76_10130 NSLT01000078.1 Protein Homology CDS 489 1112 . - 0 ID=cds-PDP76372.1;Parent=gene-CLI76_10130;Dbxref=NCBI_GP:PDP76372.1;Name=PDP76372.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816544.1;locus_tag=CLI76_10130;product=conjugative transposon protein TraK;protein_id=PDP76372.1;transl_table=11 NSLT01000078.1 Genbank gene 1124 2251 . - . ID=gene-CLI76_10135;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=CLI76_10135 NSLT01000078.1 Protein Homology CDS 1124 2251 . - 0 ID=cds-PDP76373.1;Parent=gene-CLI76_10135;Dbxref=NCBI_GP:PDP76373.1;Name=PDP76373.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874544.1;locus_tag=CLI76_10135;product=conjugative transposon protein TraJ;protein_id=PDP76373.1;transl_table=11 NSLT01000078.1 Genbank gene 2283 2912 . - . ID=gene-CLI76_10140;Name=CLI76_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10140 NSLT01000078.1 Protein Homology CDS 2283 2912 . - 0 ID=cds-PDP76374.1;Parent=gene-CLI76_10140;Dbxref=NCBI_GP:PDP76374.1;Name=PDP76374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004367641.1;locus_tag=CLI76_10140;product=hypothetical protein;protein_id=PDP76374.1;transl_table=11 NSLT01000078.1 Genbank pseudogene 2939 5239 . - . ID=gene-CLI76_10145;Name=CLI76_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10145;pseudo=true NSLT01000078.1 Protein Homology CDS 2939 5239 . - 0 ID=cds-CLI76_10145;Parent=gene-CLI76_10145;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874655.1;locus_tag=CLI76_10145;product=conjugal transfer protein TraG;pseudo=true;transl_table=11 ##sequence-region NSLT01000079.1 1 5099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000079.1 Genbank region 1 5099 . + . ID=NSLT01000079.1:1..5099;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000079.1 Genbank pseudogene 3 2801 . + . ID=gene-CLI76_10150;Name=CLI76_10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10150;pseudo=true NSLT01000079.1 Protein Homology CDS 3 2801 . + 0 ID=cds-CLI76_10150;Parent=gene-CLI76_10150;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815187.1;locus_tag=CLI76_10150;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000079.1 Genbank gene 2794 3240 . + . ID=gene-CLI76_10155;Name=CLI76_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10155 NSLT01000079.1 Protein Homology CDS 2794 3240 . + 0 ID=cds-PDP76368.1;Parent=gene-CLI76_10155;Dbxref=NCBI_GP:PDP76368.1;Name=PDP76368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583528.1;locus_tag=CLI76_10155;product=hypothetical protein;protein_id=PDP76368.1;transl_table=11 NSLT01000079.1 Genbank gene 3552 4736 . + . ID=gene-CLI76_10160;Name=CLI76_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10160 NSLT01000079.1 Protein Homology CDS 3552 4736 . + 0 ID=cds-PDP76369.1;Parent=gene-CLI76_10160;Dbxref=NCBI_GP:PDP76369.1;Name=PDP76369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583526.1;locus_tag=CLI76_10160;product=AAA family ATPase;protein_id=PDP76369.1;transl_table=11 NSLT01000079.1 Genbank gene 4690 4974 . - . ID=gene-CLI76_10165;Name=CLI76_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10165 NSLT01000079.1 Protein Homology CDS 4690 4974 . - 0 ID=cds-PDP76370.1;Parent=gene-CLI76_10165;Dbxref=NCBI_GP:PDP76370.1;Name=PDP76370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583525.1;locus_tag=CLI76_10165;product=hypothetical protein;protein_id=PDP76370.1;transl_table=11 NSLT01000079.1 Genbank gene 4986 5099 . - . ID=gene-CLI76_10170;Name=CLI76_10170;end_range=5099,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10170;partial=true NSLT01000079.1 Protein Homology CDS 4986 5099 . - 0 ID=cds-PDP76371.1;Parent=gene-CLI76_10170;Dbxref=NCBI_GP:PDP76371.1;Name=PDP76371.1;end_range=5099,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10170;partial=true;product=IS982 family transposase;protein_id=PDP76371.1;transl_table=11 ##sequence-region NSLT01000007.1 1 62356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000007.1 Genbank region 1 62356 . + . ID=NSLT01000007.1:1..62356;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000007.1 Genbank pseudogene 2 790 . + . ID=gene-CLI76_02275;Name=CLI76_02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02275;pseudo=true NSLT01000007.1 Protein Homology CDS 2 790 . + 0 ID=cds-CLI76_02275;Parent=gene-CLI76_02275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_02275;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000007.1 Genbank gene 904 1086 . + . ID=gene-CLI76_02280;Name=CLI76_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02280 NSLT01000007.1 Protein Homology CDS 904 1086 . + 0 ID=cds-PDP77755.1;Parent=gene-CLI76_02280;Dbxref=NCBI_GP:PDP77755.1;Name=PDP77755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816102.1;locus_tag=CLI76_02280;product=hypothetical protein;protein_id=PDP77755.1;transl_table=11 NSLT01000007.1 Genbank gene 1181 2587 . + . ID=gene-CLI76_02285;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=CLI76_02285 NSLT01000007.1 Protein Homology CDS 1181 2587 . + 0 ID=cds-PDP77756.1;Parent=gene-CLI76_02285;Dbxref=NCBI_GP:PDP77756.1;Name=PDP77756.1;gbkey=CDS;gene=cobJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_099801.1;locus_tag=CLI76_02285;product=precorrin-3B C(17)-methyltransferase;protein_id=PDP77756.1;transl_table=11 NSLT01000007.1 Genbank gene 2580 3821 . + . ID=gene-CLI76_02290;Name=CLI76_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02290 NSLT01000007.1 Protein Homology CDS 2580 3821 . + 0 ID=cds-PDP77757.1;Parent=gene-CLI76_02290;Dbxref=NCBI_GP:PDP77757.1;Name=PDP77757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815448.1;locus_tag=CLI76_02290;product=cobalamin biosynthesis bifunctional protein CbiET;protein_id=PDP77757.1;transl_table=11 NSLT01000007.1 Genbank gene 3818 4036 . + . ID=gene-CLI76_02295;Name=CLI76_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02295 NSLT01000007.1 Protein Homology CDS 3818 4036 . + 0 ID=cds-PDP77758.1;Parent=gene-CLI76_02295;Dbxref=NCBI_GP:PDP77758.1;Name=PDP77758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583855.1;locus_tag=CLI76_02295;product=hypothetical protein;protein_id=PDP77758.1;transl_table=11 NSLT01000007.1 Genbank gene 4071 4682 . + . ID=gene-CLI76_02300;Name=CLI76_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02300 NSLT01000007.1 Protein Homology CDS 4071 4682 . + 0 ID=cds-PDP77803.1;Parent=gene-CLI76_02300;Dbxref=NCBI_GP:PDP77803.1;Name=PDP77803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815446.1;locus_tag=CLI76_02300;product=hypothetical protein;protein_id=PDP77803.1;transl_table=11 NSLT01000007.1 Genbank gene 4687 6531 . + . ID=gene-CLI76_02305;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=CLI76_02305 NSLT01000007.1 Protein Homology CDS 4687 6531 . + 0 ID=cds-PDP77759.1;Parent=gene-CLI76_02305;Dbxref=NCBI_GP:PDP77759.1;Name=PDP77759.1;gbkey=CDS;gene=cobM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874261.1;locus_tag=CLI76_02305;product=precorrin-4 C(11)-methyltransferase;protein_id=PDP77759.1;transl_table=11 NSLT01000007.1 Genbank gene 6528 8336 . + . ID=gene-CLI76_02310;Name=CLI76_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02310 NSLT01000007.1 Protein Homology CDS 6528 8336 . + 0 ID=cds-PDP77760.1;Parent=gene-CLI76_02310;Dbxref=NCBI_GP:PDP77760.1;Name=PDP77760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457419.1;locus_tag=CLI76_02310;product=precorrin-6x reductase;protein_id=PDP77760.1;transl_table=11 NSLT01000007.1 Genbank gene 8431 9216 . - . ID=gene-CLI76_02315;Name=CLI76_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02315 NSLT01000007.1 Protein Homology CDS 8431 9216 . - 0 ID=cds-PDP77761.1;Parent=gene-CLI76_02315;Dbxref=NCBI_GP:PDP77761.1;Name=PDP77761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874257.1;locus_tag=CLI76_02315;product=formate transporter;protein_id=PDP77761.1;transl_table=11 NSLT01000007.1 Genbank gene 9626 11206 . + . ID=gene-CLI76_02320;Name=CLI76_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02320 NSLT01000007.1 Protein Homology CDS 9626 11206 . + 0 ID=cds-PDP77762.1;Parent=gene-CLI76_02320;Dbxref=NCBI_GP:PDP77762.1;Name=PDP77762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005866938.1;locus_tag=CLI76_02320;product=peptide chain release factor 3;protein_id=PDP77762.1;transl_table=11 NSLT01000007.1 Genbank gene 11239 11457 . + . ID=gene-CLI76_02325;Name=CLI76_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02325 NSLT01000007.1 Protein Homology CDS 11239 11457 . + 0 ID=cds-PDP77763.1;Parent=gene-CLI76_02325;Dbxref=NCBI_GP:PDP77763.1;Name=PDP77763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583844.1;locus_tag=CLI76_02325;product=hypothetical protein;protein_id=PDP77763.1;transl_table=11 NSLT01000007.1 Genbank gene 11508 12215 . + . ID=gene-CLI76_02330;Name=CLI76_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02330 NSLT01000007.1 Protein Homology CDS 11508 12215 . + 0 ID=cds-PDP77804.1;Parent=gene-CLI76_02330;Dbxref=NCBI_GP:PDP77804.1;Name=PDP77804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815438.1;locus_tag=CLI76_02330;product=DUF4271 domain-containing protein;protein_id=PDP77804.1;transl_table=11 NSLT01000007.1 Genbank gene 12206 12952 . + . ID=gene-CLI76_02335;Name=CLI76_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02335 NSLT01000007.1 Protein Homology CDS 12206 12952 . + 0 ID=cds-PDP77764.1;Parent=gene-CLI76_02335;Dbxref=NCBI_GP:PDP77764.1;Name=PDP77764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583842.1;locus_tag=CLI76_02335;product=uroporphyrinogen-III synthase;protein_id=PDP77764.1;transl_table=11 NSLT01000007.1 Genbank gene 12949 13362 . + . ID=gene-CLI76_02340;Name=CLI76_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02340 NSLT01000007.1 Protein Homology CDS 12949 13362 . + 0 ID=cds-PDP77765.1;Parent=gene-CLI76_02340;Dbxref=NCBI_GP:PDP77765.1;Name=PDP77765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457414.1;locus_tag=CLI76_02340;product=ribonuclease P protein component;protein_id=PDP77765.1;transl_table=11 NSLT01000007.1 Genbank gene 13368 13598 . + . ID=gene-CLI76_02345;Name=CLI76_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02345 NSLT01000007.1 Protein Homology CDS 13368 13598 . + 0 ID=cds-PDP77766.1;Parent=gene-CLI76_02345;Dbxref=NCBI_GP:PDP77766.1;Name=PDP77766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583840.1;locus_tag=CLI76_02345;product=membrane protein insertion efficiency factor YidD;protein_id=PDP77766.1;transl_table=11 NSLT01000007.1 Genbank gene 13582 14295 . + . ID=gene-CLI76_02350;Name=CLI76_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02350 NSLT01000007.1 Protein Homology CDS 13582 14295 . + 0 ID=cds-PDP77767.1;Parent=gene-CLI76_02350;Dbxref=NCBI_GP:PDP77767.1;Name=PDP77767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815436.1;locus_tag=CLI76_02350;product=hydrolase TatD;protein_id=PDP77767.1;transl_table=11 NSLT01000007.1 Genbank gene 14248 14787 . - . ID=gene-CLI76_02355;Name=CLI76_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02355 NSLT01000007.1 Protein Homology CDS 14248 14787 . - 0 ID=cds-PDP77768.1;Parent=gene-CLI76_02355;Dbxref=NCBI_GP:PDP77768.1;Name=PDP77768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955950.1;locus_tag=CLI76_02355;product=hypothetical protein;protein_id=PDP77768.1;transl_table=11 NSLT01000007.1 Genbank gene 15965 18790 . - . ID=gene-CLI76_02360;Name=CLI76_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02360 NSLT01000007.1 Protein Homology CDS 15965 18790 . - 0 ID=cds-PDP77769.1;Parent=gene-CLI76_02360;Dbxref=NCBI_GP:PDP77769.1;Name=PDP77769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815430.1;locus_tag=CLI76_02360;product=peptidase M16;protein_id=PDP77769.1;transl_table=11 NSLT01000007.1 Genbank gene 19068 19646 . - . ID=gene-CLI76_02365;Name=CLI76_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02365 NSLT01000007.1 Protein Homology CDS 19068 19646 . - 0 ID=cds-PDP77770.1;Parent=gene-CLI76_02365;Dbxref=NCBI_GP:PDP77770.1;Name=PDP77770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008146779.1;locus_tag=CLI76_02365;product=rubrerythrin family protein;protein_id=PDP77770.1;transl_table=11 NSLT01000007.1 Genbank gene 19639 19905 . - . ID=gene-CLI76_02370;Name=CLI76_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02370 NSLT01000007.1 GeneMarkS+ CDS 19639 19905 . - 0 ID=cds-PDP77771.1;Parent=gene-CLI76_02370;Dbxref=NCBI_GP:PDP77771.1;Name=PDP77771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_02370;product=hypothetical protein;protein_id=PDP77771.1;transl_table=11 NSLT01000007.1 Genbank gene 19975 20466 . - . ID=gene-CLI76_02375;Name=CLI76_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02375 NSLT01000007.1 Protein Homology CDS 19975 20466 . - 0 ID=cds-PDP77772.1;Parent=gene-CLI76_02375;Dbxref=NCBI_GP:PDP77772.1;Name=PDP77772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583835.1;locus_tag=CLI76_02375;product=hypothetical protein;protein_id=PDP77772.1;transl_table=11 NSLT01000007.1 Genbank gene 20501 21025 . - . ID=gene-CLI76_02380;Name=CLI76_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02380 NSLT01000007.1 Protein Homology CDS 20501 21025 . - 0 ID=cds-PDP77773.1;Parent=gene-CLI76_02380;Dbxref=NCBI_GP:PDP77773.1;Name=PDP77773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457407.1;locus_tag=CLI76_02380;product=hypothetical protein;protein_id=PDP77773.1;transl_table=11 NSLT01000007.1 Genbank gene 21082 23757 . - . ID=gene-CLI76_02385;Name=CLI76_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02385 NSLT01000007.1 Protein Homology CDS 21082 23757 . - 0 ID=cds-PDP77774.1;Parent=gene-CLI76_02385;Dbxref=NCBI_GP:PDP77774.1;Name=PDP77774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457406.1;locus_tag=CLI76_02385;product=outer membrane protein assembly factor BamA;protein_id=PDP77774.1;transl_table=11 NSLT01000007.1 Genbank gene 23775 24539 . - . ID=gene-CLI76_02390;Name=CLI76_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02390 NSLT01000007.1 Protein Homology CDS 23775 24539 . - 0 ID=cds-PDP77775.1;Parent=gene-CLI76_02390;Dbxref=NCBI_GP:PDP77775.1;Name=PDP77775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815429.1;locus_tag=CLI76_02390;product=isoprenyl transferase;protein_id=PDP77775.1;transl_table=11 NSLT01000007.1 Genbank gene 24617 25324 . - . ID=gene-CLI76_02395;Name=CLI76_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02395 NSLT01000007.1 Protein Homology CDS 24617 25324 . - 0 ID=cds-PDP77776.1;Parent=gene-CLI76_02395;Dbxref=NCBI_GP:PDP77776.1;Name=PDP77776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815428.1;locus_tag=CLI76_02395;product=hypothetical protein;protein_id=PDP77776.1;transl_table=11 NSLT01000007.1 Genbank gene 25311 26681 . - . ID=gene-CLI76_02400;Name=CLI76_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02400 NSLT01000007.1 Protein Homology CDS 25311 26681 . - 0 ID=cds-PDP77777.1;Parent=gene-CLI76_02400;Dbxref=NCBI_GP:PDP77777.1;Name=PDP77777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965925.1;locus_tag=CLI76_02400;product=hypothetical protein;protein_id=PDP77777.1;transl_table=11 NSLT01000007.1 Genbank gene 26898 28403 . - . ID=gene-CLI76_02405;Name=CLI76_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02405 NSLT01000007.1 Protein Homology CDS 26898 28403 . - 0 ID=cds-PDP77778.1;Parent=gene-CLI76_02405;Dbxref=NCBI_GP:PDP77778.1;Name=PDP77778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07980.9;locus_tag=CLI76_02405;product=RagB/SusD family nutrient uptake outer membrane protein;protein_id=PDP77778.1;transl_table=11 NSLT01000007.1 Genbank gene 28428 31568 . - . ID=gene-CLI76_02410;Name=CLI76_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02410 NSLT01000007.1 Protein Homology CDS 28428 31568 . - 0 ID=cds-PDP77779.1;Parent=gene-CLI76_02410;Dbxref=NCBI_GP:PDP77779.1;Name=PDP77779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874718.1;locus_tag=CLI76_02410;product=TonB-dependent receptor;protein_id=PDP77779.1;transl_table=11 NSLT01000007.1 Genbank gene 32509 36195 . - . ID=gene-CLI76_02415;Name=CLI76_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02415 NSLT01000007.1 Protein Homology CDS 32509 36195 . - 0 ID=cds-PDP77780.1;Parent=gene-CLI76_02415;Dbxref=NCBI_GP:PDP77780.1;Name=PDP77780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457399.1;locus_tag=CLI76_02415;product=VWA domain-containing protein;protein_id=PDP77780.1;transl_table=11 NSLT01000007.1 Genbank gene 36345 37346 . - . ID=gene-CLI76_02420;Name=CLI76_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02420 NSLT01000007.1 Protein Homology CDS 36345 37346 . - 0 ID=cds-PDP77781.1;Parent=gene-CLI76_02420;Dbxref=NCBI_GP:PDP77781.1;Name=PDP77781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875055.1;locus_tag=CLI76_02420;product=fimbrial assembly protein;protein_id=PDP77781.1;transl_table=11 NSLT01000007.1 Genbank gene 37355 38695 . - . ID=gene-CLI76_02425;Name=CLI76_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02425 NSLT01000007.1 Protein Homology CDS 37355 38695 . - 0 ID=cds-PDP77782.1;Parent=gene-CLI76_02425;Dbxref=NCBI_GP:PDP77782.1;Name=PDP77782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875053.1;locus_tag=CLI76_02425;product=fimbrial assembly protein;protein_id=PDP77782.1;transl_table=11 NSLT01000007.1 Genbank gene 38996 39970 . - . ID=gene-CLI76_02430;Name=CLI76_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02430 NSLT01000007.1 Protein Homology CDS 38996 39970 . - 0 ID=cds-PDP77783.1;Parent=gene-CLI76_02430;Dbxref=NCBI_GP:PDP77783.1;Name=PDP77783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955942.1;locus_tag=CLI76_02430;product=fimbrial protein;protein_id=PDP77783.1;transl_table=11 NSLT01000007.1 Genbank gene 40050 41741 . - . ID=gene-CLI76_02435;Name=CLI76_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02435 NSLT01000007.1 Protein Homology CDS 40050 41741 . - 0 ID=cds-PDP77784.1;Parent=gene-CLI76_02435;Dbxref=NCBI_GP:PDP77784.1;Name=PDP77784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457396.1;locus_tag=CLI76_02435;product=fimbrial protein;protein_id=PDP77784.1;transl_table=11 NSLT01000007.1 Genbank gene 42745 43152 . + . ID=gene-CLI76_02440;Name=CLI76_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02440 NSLT01000007.1 Protein Homology CDS 42745 43152 . + 0 ID=cds-PDP77785.1;Parent=gene-CLI76_02440;Dbxref=NCBI_GP:PDP77785.1;Name=PDP77785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458720.1;locus_tag=CLI76_02440;product=hypothetical protein;protein_id=PDP77785.1;transl_table=11 NSLT01000007.1 Genbank gene 43110 45590 . + . ID=gene-CLI76_02445;Name=CLI76_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02445 NSLT01000007.1 Protein Homology CDS 43110 45590 . + 0 ID=cds-PDP77786.1;Parent=gene-CLI76_02445;Dbxref=NCBI_GP:PDP77786.1;Name=PDP77786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965262.1;locus_tag=CLI76_02445;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=PDP77786.1;transl_table=11 NSLT01000007.1 Genbank gene 45661 46014 . + . ID=gene-CLI76_02450;Name=CLI76_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02450 NSLT01000007.1 Protein Homology CDS 45661 46014 . + 0 ID=cds-PDP77805.1;Parent=gene-CLI76_02450;Dbxref=NCBI_GP:PDP77805.1;Name=PDP77805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457393.1;locus_tag=CLI76_02450;product=DNA-binding protein;protein_id=PDP77805.1;transl_table=11 NSLT01000007.1 Genbank gene 46077 46859 . - . ID=gene-CLI76_02455;Name=CLI76_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02455 NSLT01000007.1 Protein Homology CDS 46077 46859 . - 0 ID=cds-PDP77787.1;Parent=gene-CLI76_02455;Dbxref=NCBI_GP:PDP77787.1;Name=PDP77787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965260.1;locus_tag=CLI76_02455;product=3'-5' exonuclease;protein_id=PDP77787.1;transl_table=11 NSLT01000007.1 Genbank gene 46856 48628 . - . ID=gene-CLI76_02460;Name=CLI76_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02460 NSLT01000007.1 Protein Homology CDS 46856 48628 . - 0 ID=cds-PDP77788.1;Parent=gene-CLI76_02460;Dbxref=NCBI_GP:PDP77788.1;Name=PDP77788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875290.1;locus_tag=CLI76_02460;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PDP77788.1;transl_table=11 NSLT01000007.1 Genbank gene 48658 50700 . - . ID=gene-CLI76_02465;Name=CLI76_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02465 NSLT01000007.1 Protein Homology CDS 48658 50700 . - 0 ID=cds-PDP77789.1;Parent=gene-CLI76_02465;Dbxref=NCBI_GP:PDP77789.1;Name=PDP77789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_811845.1;locus_tag=CLI76_02465;product=methionine--tRNA ligase;protein_id=PDP77789.1;transl_table=11 NSLT01000007.1 Genbank gene 50826 51143 . + . ID=gene-CLI76_02470;Name=CLI76_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02470 NSLT01000007.1 Protein Homology CDS 50826 51143 . + 0 ID=cds-PDP77790.1;Parent=gene-CLI76_02470;Dbxref=NCBI_GP:PDP77790.1;Name=PDP77790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815414.1;locus_tag=CLI76_02470;product=hypothetical protein;protein_id=PDP77790.1;transl_table=11 NSLT01000007.1 Genbank gene 51311 51889 . + . ID=gene-CLI76_02475;Name=CLI76_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02475 NSLT01000007.1 Protein Homology CDS 51311 51889 . + 0 ID=cds-PDP77791.1;Parent=gene-CLI76_02475;Dbxref=NCBI_GP:PDP77791.1;Name=PDP77791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875353.1;locus_tag=CLI76_02475;product=50S ribosomal protein L25;protein_id=PDP77791.1;transl_table=11 NSLT01000007.1 Genbank gene 52030 52587 . + . ID=gene-CLI76_02480;Name=CLI76_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02480 NSLT01000007.1 Protein Homology CDS 52030 52587 . + 0 ID=cds-PDP77792.1;Parent=gene-CLI76_02480;Dbxref=NCBI_GP:PDP77792.1;Name=PDP77792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583810.1;locus_tag=CLI76_02480;product=peptidyl-tRNA hydrolase;protein_id=PDP77792.1;transl_table=11 NSLT01000007.1 Genbank gene 52593 53030 . + . ID=gene-CLI76_02485;Name=CLI76_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02485 NSLT01000007.1 Protein Homology CDS 52593 53030 . + 0 ID=cds-PDP77793.1;Parent=gene-CLI76_02485;Dbxref=NCBI_GP:PDP77793.1;Name=PDP77793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815412.1;locus_tag=CLI76_02485;product=heat-shock protein Hsp15;protein_id=PDP77793.1;transl_table=11 NSLT01000007.1 Genbank gene 53005 53319 . + . ID=gene-CLI76_02490;Name=CLI76_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02490 NSLT01000007.1 Protein Homology CDS 53005 53319 . + 0 ID=cds-PDP77794.1;Parent=gene-CLI76_02490;Dbxref=NCBI_GP:PDP77794.1;Name=PDP77794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457386.1;locus_tag=CLI76_02490;product=hypothetical protein;protein_id=PDP77794.1;transl_table=11 NSLT01000007.1 Genbank gene 53515 55164 . + . ID=gene-CLI76_02495;Name=CLI76_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02495 NSLT01000007.1 Protein Homology CDS 53515 55164 . + 0 ID=cds-PDP77795.1;Parent=gene-CLI76_02495;Dbxref=NCBI_GP:PDP77795.1;Name=PDP77795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815410.1;locus_tag=CLI76_02495;product=diphosphate--fructose-6-phosphate 1-phosphotransferase;protein_id=PDP77795.1;transl_table=11 NSLT01000007.1 Genbank gene 55313 55894 . + . ID=gene-CLI76_02500;Name=CLI76_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02500 NSLT01000007.1 Protein Homology CDS 55313 55894 . + 0 ID=cds-PDP77796.1;Parent=gene-CLI76_02500;Dbxref=NCBI_GP:PDP77796.1;Name=PDP77796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583806.1;locus_tag=CLI76_02500;product=RNA polymerase subunit sigma-24;protein_id=PDP77796.1;transl_table=11 NSLT01000007.1 Genbank gene 56314 57216 . + . ID=gene-CLI76_02505;Name=CLI76_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02505 NSLT01000007.1 Protein Homology CDS 56314 57216 . + 0 ID=cds-PDP77797.1;Parent=gene-CLI76_02505;Dbxref=NCBI_GP:PDP77797.1;Name=PDP77797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583804.1;locus_tag=CLI76_02505;product=nucleotidyltransferase;protein_id=PDP77797.1;transl_table=11 NSLT01000007.1 Genbank gene 57235 59304 . + . ID=gene-CLI76_02510;Name=CLI76_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02510 NSLT01000007.1 Protein Homology CDS 57235 59304 . + 0 ID=cds-PDP77798.1;Parent=gene-CLI76_02510;Dbxref=NCBI_GP:PDP77798.1;Name=PDP77798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875347.1;locus_tag=CLI76_02510;product=peptidase M13;protein_id=PDP77798.1;transl_table=11 NSLT01000007.1 Genbank gene 59434 60174 . - . ID=gene-CLI76_02515;Name=CLI76_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02515 NSLT01000007.1 Protein Homology CDS 59434 60174 . - 0 ID=cds-PDP77799.1;Parent=gene-CLI76_02515;Dbxref=NCBI_GP:PDP77799.1;Name=PDP77799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875257.1;locus_tag=CLI76_02515;product=amidophosphoribosyltransferase;protein_id=PDP77799.1;transl_table=11 NSLT01000007.1 Genbank gene 60158 60643 . - . ID=gene-CLI76_02520;Name=CLI76_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02520 NSLT01000007.1 Protein Homology CDS 60158 60643 . - 0 ID=cds-PDP77800.1;Parent=gene-CLI76_02520;Dbxref=NCBI_GP:PDP77800.1;Name=PDP77800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583801.1;locus_tag=CLI76_02520;product=recombinase RecX;protein_id=PDP77800.1;transl_table=11 NSLT01000007.1 Genbank gene 60640 61521 . - . ID=gene-CLI76_02525;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CLI76_02525 NSLT01000007.1 Protein Homology CDS 60640 61521 . - 0 ID=cds-PDP77801.1;Parent=gene-CLI76_02525;Dbxref=NCBI_GP:PDP77801.1;Name=PDP77801.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875312.1;locus_tag=CLI76_02525;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=PDP77801.1;transl_table=11 NSLT01000007.1 Genbank gene 61546 62356 . + . ID=gene-CLI76_02530;Name=ribD;end_range=62356,.;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CLI76_02530;partial=true NSLT01000007.1 Protein Homology CDS 61546 62356 . + 0 ID=cds-PDP77802.1;Parent=gene-CLI76_02530;Dbxref=NCBI_GP:PDP77802.1;Name=PDP77802.1;end_range=62356,.;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875259.1;locus_tag=CLI76_02530;partial=true;product=riboflavin biosynthesis protein RibD;protein_id=PDP77802.1;transl_table=11 ##sequence-region NSLT01000080.1 1 4745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000080.1 Genbank region 1 4745 . + . ID=NSLT01000080.1:1..4745;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000080.1 Genbank pseudogene 17 211 . + . ID=gene-CLI76_10175;Name=CLI76_10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10175;pseudo=true NSLT01000080.1 Protein Homology CDS 17 211 . + 0 ID=cds-CLI76_10175;Parent=gene-CLI76_10175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815433.1;locus_tag=CLI76_10175;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000080.1 Genbank gene 612 2282 . + . ID=gene-CLI76_10180;Name=CLI76_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10180 NSLT01000080.1 Protein Homology CDS 612 2282 . + 0 ID=cds-PDP76364.1;Parent=gene-CLI76_10180;Dbxref=NCBI_GP:PDP76364.1;Name=PDP76364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816581.1;locus_tag=CLI76_10180;product=peptidylarginine deiminase;protein_id=PDP76364.1;transl_table=11 NSLT01000080.1 Genbank gene 2328 2528 . + . ID=gene-CLI76_10185;Name=CLI76_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10185 NSLT01000080.1 Protein Homology CDS 2328 2528 . + 0 ID=cds-PDP76365.1;Parent=gene-CLI76_10185;Dbxref=NCBI_GP:PDP76365.1;Name=PDP76365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457861.1;locus_tag=CLI76_10185;product=hypothetical protein;protein_id=PDP76365.1;transl_table=11 NSLT01000080.1 Genbank gene 2507 4039 . + . ID=gene-CLI76_10190;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CLI76_10190 NSLT01000080.1 Protein Homology CDS 2507 4039 . + 0 ID=cds-PDP76366.1;Parent=gene-CLI76_10190;Dbxref=NCBI_GP:PDP76366.1;Name=PDP76366.1;gbkey=CDS;gene=dacB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585431.1;locus_tag=CLI76_10190;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=PDP76366.1;transl_table=11 NSLT01000080.1 Genbank gene 4373 4543 . + . ID=gene-CLI76_10195;Name=CLI76_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10195 NSLT01000080.1 Protein Homology CDS 4373 4543 . + 0 ID=cds-PDP76367.1;Parent=gene-CLI76_10195;Dbxref=NCBI_GP:PDP76367.1;Name=PDP76367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005810660.1;locus_tag=CLI76_10195;product=4Fe-4S ferredoxin;protein_id=PDP76367.1;transl_table=11 ##sequence-region NSLT01000081.1 1 4636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000081.1 Genbank region 1 4636 . + . ID=NSLT01000081.1:1..4636;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000081.1 Genbank gene 504 1733 . + . ID=gene-CLI76_10200;Name=rocD;gbkey=Gene;gene=rocD;gene_biotype=protein_coding;locus_tag=CLI76_10200 NSLT01000081.1 Protein Homology CDS 504 1733 . + 0 ID=cds-PDP76361.1;Parent=gene-CLI76_10200;Dbxref=NCBI_GP:PDP76361.1;Name=PDP76361.1;gbkey=CDS;gene=rocD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875102.1;locus_tag=CLI76_10200;product=ornithine--oxo-acid transaminase;protein_id=PDP76361.1;transl_table=11 NSLT01000081.1 Genbank gene 1740 2669 . + . ID=gene-CLI76_10205;Name=CLI76_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10205 NSLT01000081.1 Protein Homology CDS 1740 2669 . + 0 ID=cds-PDP76362.1;Parent=gene-CLI76_10205;Dbxref=NCBI_GP:PDP76362.1;Name=PDP76362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816701.1;locus_tag=CLI76_10205;product=amidinotransferase;protein_id=PDP76362.1;transl_table=11 NSLT01000081.1 Genbank gene 2746 4377 . + . ID=gene-CLI76_10210;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CLI76_10210 NSLT01000081.1 Protein Homology CDS 2746 4377 . + 0 ID=cds-PDP76363.1;Parent=gene-CLI76_10210;Dbxref=NCBI_GP:PDP76363.1;Name=PDP76363.1;gbkey=CDS;gene=pruA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585586.1;locus_tag=CLI76_10210;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=PDP76363.1;transl_table=11 ##sequence-region NSLT01000082.1 1 4504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000082.1 Genbank region 1 4504 . + . ID=NSLT01000082.1:1..4504;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000082.1 Genbank gene 154 1611 . + . ID=gene-CLI76_10215;Name=CLI76_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10215 NSLT01000082.1 Protein Homology CDS 154 1611 . + 0 ID=cds-PDP76356.1;Parent=gene-CLI76_10215;Dbxref=NCBI_GP:PDP76356.1;Name=PDP76356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019149558.1;locus_tag=CLI76_10215;product=transcriptional regulator;protein_id=PDP76356.1;transl_table=11 NSLT01000082.1 Genbank gene 1726 2127 . + . ID=gene-CLI76_10220;Name=CLI76_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10220 NSLT01000082.1 Protein Homology CDS 1726 2127 . + 0 ID=cds-PDP76360.1;Parent=gene-CLI76_10220;Dbxref=NCBI_GP:PDP76360.1;Name=PDP76360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874998.1;locus_tag=CLI76_10220;product=polyketide cyclase;protein_id=PDP76360.1;transl_table=11 NSLT01000082.1 Genbank gene 2240 2665 . - . ID=gene-CLI76_10225;Name=CLI76_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10225 NSLT01000082.1 Protein Homology CDS 2240 2665 . - 0 ID=cds-PDP76357.1;Parent=gene-CLI76_10225;Dbxref=NCBI_GP:PDP76357.1;Name=PDP76357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874996.1;locus_tag=CLI76_10225;product=hypothetical protein;protein_id=PDP76357.1;transl_table=11 NSLT01000082.1 Genbank gene 2669 3088 . - . ID=gene-CLI76_10230;Name=CLI76_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10230 NSLT01000082.1 Protein Homology CDS 2669 3088 . - 0 ID=cds-PDP76358.1;Parent=gene-CLI76_10230;Dbxref=NCBI_GP:PDP76358.1;Name=PDP76358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815945.1;locus_tag=CLI76_10230;product=hypothetical protein;protein_id=PDP76358.1;transl_table=11 NSLT01000082.1 Genbank gene 3088 4236 . - . ID=gene-CLI76_10235;Name=CLI76_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10235 NSLT01000082.1 Protein Homology CDS 3088 4236 . - 0 ID=cds-PDP76359.1;Parent=gene-CLI76_10235;Dbxref=NCBI_GP:PDP76359.1;Name=PDP76359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583492.1;locus_tag=CLI76_10235;product=8-amino-7-oxononanoate synthase;protein_id=PDP76359.1;transl_table=11 ##sequence-region NSLT01000083.1 1 4222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000083.1 Genbank region 1 4222 . + . ID=NSLT01000083.1:1..4222;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000083.1 Genbank gene 75 1133 . - . ID=gene-CLI76_10240;Name=CLI76_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10240 NSLT01000083.1 Protein Homology CDS 75 1133 . - 0 ID=cds-PDP76352.1;Parent=gene-CLI76_10240;Dbxref=NCBI_GP:PDP76352.1;Name=PDP76352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874198.1;locus_tag=CLI76_10240;product=hypothetical protein;protein_id=PDP76352.1;transl_table=11 NSLT01000083.1 Genbank gene 1231 2607 . - . ID=gene-CLI76_10245;Name=CLI76_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10245 NSLT01000083.1 Protein Homology CDS 1231 2607 . - 0 ID=cds-PDP76353.1;Parent=gene-CLI76_10245;Dbxref=NCBI_GP:PDP76353.1;Name=PDP76353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874156.1;locus_tag=CLI76_10245;product=DUF3987 domain-containing protein;protein_id=PDP76353.1;transl_table=11 NSLT01000083.1 Genbank gene 2617 2976 . - . ID=gene-CLI76_10250;Name=CLI76_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10250 NSLT01000083.1 Protein Homology CDS 2617 2976 . - 0 ID=cds-PDP76354.1;Parent=gene-CLI76_10250;Dbxref=NCBI_GP:PDP76354.1;Name=PDP76354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874216.1;locus_tag=CLI76_10250;product=DNA-binding protein;protein_id=PDP76354.1;transl_table=11 NSLT01000083.1 Genbank pseudogene 3093 3386 . - . ID=gene-CLI76_10255;Name=CLI76_10255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10255;pseudo=true NSLT01000083.1 Protein Homology CDS 3093 3386 . - 0 ID=cds-CLI76_10255;Parent=gene-CLI76_10255;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874206.1;locus_tag=CLI76_10255;product=mobilization protein;pseudo=true;transl_table=11 NSLT01000083.1 Genbank gene 3433 4222 . - . ID=gene-CLI76_10260;Name=CLI76_10260;end_range=4222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10260;partial=true NSLT01000083.1 Protein Homology CDS 3433 4222 . - 1 ID=cds-PDP76355.1;Parent=gene-CLI76_10260;Dbxref=NCBI_GP:PDP76355.1;Name=PDP76355.1;end_range=4222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10260;partial=true;product=IS3 family transposase;protein_id=PDP76355.1;transl_table=11 ##sequence-region NSLT01000084.1 1 3898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000084.1 Genbank region 1 3898 . + . ID=NSLT01000084.1:1..3898;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000084.1 Genbank pseudogene 3 446 . + . ID=gene-CLI76_10265;Name=CLI76_10265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10265;pseudo=true NSLT01000084.1 Protein Homology CDS 3 446 . + 0 ID=cds-CLI76_10265;Parent=gene-CLI76_10265;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007173314.1;locus_tag=CLI76_10265;product=recombinase;pseudo=true;transl_table=11 NSLT01000084.1 Genbank gene 480 953 . + . ID=gene-CLI76_10270;Name=CLI76_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10270 NSLT01000084.1 Protein Homology CDS 480 953 . + 0 ID=cds-PDP76347.1;Parent=gene-CLI76_10270;Dbxref=NCBI_GP:PDP76347.1;Name=PDP76347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009436185.1;locus_tag=CLI76_10270;product=hypothetical protein;protein_id=PDP76347.1;transl_table=11 NSLT01000084.1 Genbank gene 1098 1448 . + . ID=gene-CLI76_10275;Name=CLI76_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10275 NSLT01000084.1 Protein Homology CDS 1098 1448 . + 0 ID=cds-PDP76351.1;Parent=gene-CLI76_10275;Dbxref=NCBI_GP:PDP76351.1;Name=PDP76351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009227185.1;locus_tag=CLI76_10275;product=hypothetical protein;protein_id=PDP76351.1;transl_table=11 NSLT01000084.1 Genbank gene 1940 2359 . + . ID=gene-CLI76_10280;Name=CLI76_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10280 NSLT01000084.1 Protein Homology CDS 1940 2359 . + 0 ID=cds-PDP76348.1;Parent=gene-CLI76_10280;Dbxref=NCBI_GP:PDP76348.1;Name=PDP76348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005467900.1;locus_tag=CLI76_10280;product=PcfK-like protein;protein_id=PDP76348.1;transl_table=11 NSLT01000084.1 Genbank gene 2364 3638 . + . ID=gene-CLI76_10285;Name=CLI76_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10285 NSLT01000084.1 Protein Homology CDS 2364 3638 . + 0 ID=cds-PDP76349.1;Parent=gene-CLI76_10285;Dbxref=NCBI_GP:PDP76349.1;Name=PDP76349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004343790.1;locus_tag=CLI76_10285;product=PcfJ-like protein;protein_id=PDP76349.1;transl_table=11 NSLT01000084.1 Genbank gene 3666 3898 . + . ID=gene-CLI76_10290;Name=CLI76_10290;end_range=3898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10290;partial=true NSLT01000084.1 Protein Homology CDS 3666 3898 . + 0 ID=cds-PDP76350.1;Parent=gene-CLI76_10290;Dbxref=NCBI_GP:PDP76350.1;Name=PDP76350.1;end_range=3898,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004348173.1;locus_tag=CLI76_10290;partial=true;product=hypothetical protein;protein_id=PDP76350.1;transl_table=11 ##sequence-region NSLT01000085.1 1 3859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000085.1 Genbank region 1 3859 . + . ID=NSLT01000085.1:1..3859;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000085.1 Genbank direct_repeat 27 3672 . + . ID=id-NSLT01000085.1:27..3672;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=28..57;rpt_unit_seq=atttcaattgcaccatacaggaattaaaac ##sequence-region NSLT01000086.1 1 3593 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000086.1 Genbank region 1 3593 . + . ID=NSLT01000086.1:1..3593;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000086.1 Genbank pseudogene 186 3455 . + . ID=gene-CLI76_10295;Name=CLI76_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10295;pseudo=true NSLT01000086.1 Protein Homology CDS 186 3455 . + 0 ID=cds-CLI76_10295;Parent=gene-CLI76_10295;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009347067.1;locus_tag=CLI76_10295;product=helicase;pseudo=true;transl_table=11 ##sequence-region NSLT01000087.1 1 3589 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000087.1 Genbank region 1 3589 . + . ID=NSLT01000087.1:1..3589;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000087.1 Genbank pseudogene 1 1127 . + . ID=gene-CLI76_10300;Name=CLI76_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10300;pseudo=true NSLT01000087.1 Protein Homology CDS 1 1127 . + 0 ID=cds-CLI76_10300;Parent=gene-CLI76_10300;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10300;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000087.1 Genbank gene 1257 1436 . + . ID=gene-CLI76_10305;Name=CLI76_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10305 NSLT01000087.1 Protein Homology CDS 1257 1436 . + 0 ID=cds-PDP76342.1;Parent=gene-CLI76_10305;Dbxref=NCBI_GP:PDP76342.1;Name=PDP76342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_10305;product=hypothetical protein;protein_id=PDP76342.1;transl_table=11 NSLT01000087.1 Genbank gene 1541 2626 . + . ID=gene-CLI76_10310;Name=CLI76_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10310 NSLT01000087.1 Protein Homology CDS 1541 2626 . + 0 ID=cds-PDP76343.1;Parent=gene-CLI76_10310;Dbxref=NCBI_GP:PDP76343.1;Name=PDP76343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10310;product=IS5/IS1182 family transposase;protein_id=PDP76343.1;transl_table=11 NSLT01000087.1 Genbank gene 2651 2782 . + . ID=gene-CLI76_10315;Name=CLI76_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10315 NSLT01000087.1 Protein Homology CDS 2651 2782 . + 0 ID=cds-PDP76344.1;Parent=gene-CLI76_10315;Dbxref=NCBI_GP:PDP76344.1;Name=PDP76344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874092.1;locus_tag=CLI76_10315;product=DNA methylase;protein_id=PDP76344.1;transl_table=11 NSLT01000087.1 Genbank gene 2844 3098 . - . ID=gene-CLI76_10320;Name=CLI76_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10320 NSLT01000087.1 Protein Homology CDS 2844 3098 . - 0 ID=cds-PDP76345.1;Parent=gene-CLI76_10320;Dbxref=NCBI_GP:PDP76345.1;Name=PDP76345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457620.1%2CRefSeq:WP_013815431.1;locus_tag=CLI76_10320;product=hypothetical protein;protein_id=PDP76345.1;transl_table=11 NSLT01000087.1 Genbank gene 3132 3589 . + . ID=gene-CLI76_10325;Name=CLI76_10325;end_range=3589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10325;partial=true NSLT01000087.1 Protein Homology CDS 3132 3589 . + 0 ID=cds-PDP76346.1;Parent=gene-CLI76_10325;Dbxref=NCBI_GP:PDP76346.1;Name=PDP76346.1;end_range=3589,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10325;partial=true;product=IS982 family transposase;protein_id=PDP76346.1;transl_table=11 ##sequence-region NSLT01000088.1 1 3564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000088.1 Genbank region 1 3564 . + . ID=NSLT01000088.1:1..3564;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000088.1 Genbank gene 14 916 . - . ID=gene-CLI76_10330;Name=CLI76_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10330 NSLT01000088.1 Protein Homology CDS 14 916 . - 0 ID=cds-PDP76336.1;Parent=gene-CLI76_10330;Dbxref=NCBI_GP:PDP76336.1;Name=PDP76336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956127.1;locus_tag=CLI76_10330;product=IS982 family transposase IS195;protein_id=PDP76336.1;transl_table=11 NSLT01000088.1 Genbank gene 1464 1784 . + . ID=gene-CLI76_10335;Name=CLI76_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10335 NSLT01000088.1 Protein Homology CDS 1464 1784 . + 0 ID=cds-PDP76337.1;Parent=gene-CLI76_10335;Dbxref=NCBI_GP:PDP76337.1;Name=PDP76337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359957.1;locus_tag=CLI76_10335;product=transcriptional regulator;protein_id=PDP76337.1;transl_table=11 NSLT01000088.1 Genbank gene 1788 2264 . + . ID=gene-CLI76_10340;Name=CLI76_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10340 NSLT01000088.1 Protein Homology CDS 1788 2264 . + 0 ID=cds-PDP76338.1;Parent=gene-CLI76_10340;Dbxref=NCBI_GP:PDP76338.1;Name=PDP76338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018359958.1;locus_tag=CLI76_10340;product=phosphohydrolase;protein_id=PDP76338.1;transl_table=11 NSLT01000088.1 Genbank gene 2530 2754 . + . ID=gene-CLI76_10345;Name=CLI76_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10345 NSLT01000088.1 Protein Homology CDS 2530 2754 . + 0 ID=cds-PDP76340.1;Parent=gene-CLI76_10345;Dbxref=NCBI_GP:PDP76340.1;Name=PDP76340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874043.1;locus_tag=CLI76_10345;product=transcriptional regulator;protein_id=PDP76340.1;transl_table=11 NSLT01000088.1 Genbank gene 2751 3086 . + . ID=gene-CLI76_10350;Name=CLI76_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10350 NSLT01000088.1 Protein Homology CDS 2751 3086 . + 0 ID=cds-PDP76339.1;Parent=gene-CLI76_10350;Dbxref=NCBI_GP:PDP76339.1;Name=PDP76339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874041.1;locus_tag=CLI76_10350;product=phosphatidylinositol kinase;protein_id=PDP76339.1;transl_table=11 NSLT01000088.1 Genbank gene 3076 3564 . + . ID=gene-CLI76_10355;Name=CLI76_10355;end_range=3564,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10355;partial=true NSLT01000088.1 Protein Homology CDS 3076 3564 . + 0 ID=cds-PDP76341.1;Parent=gene-CLI76_10355;Dbxref=NCBI_GP:PDP76341.1;Name=PDP76341.1;end_range=3564,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956143.1;locus_tag=CLI76_10355;partial=true;product=toxin HipA;protein_id=PDP76341.1;transl_table=11 ##sequence-region NSLT01000089.1 1 3538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000089.1 Genbank region 1 3538 . + . ID=NSLT01000089.1:1..3538;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000089.1 Genbank gene 1 120 . - . ID=gene-CLI76_10360;Name=CLI76_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10360;partial=true;start_range=.,1 NSLT01000089.1 Protein Homology CDS 1 120 . - 0 ID=cds-PDP76335.1;Parent=gene-CLI76_10360;Dbxref=NCBI_GP:PDP76335.1;Name=PDP76335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457993.1;locus_tag=CLI76_10360;partial=true;product=hypothetical protein;protein_id=PDP76335.1;start_range=.,1;transl_table=11 NSLT01000089.1 Genbank gene 773 2800 . - . ID=gene-CLI76_10365;Name=CLI76_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10365 NSLT01000089.1 Protein Homology CDS 773 2800 . - 0 ID=cds-PDP76334.1;Parent=gene-CLI76_10365;Dbxref=NCBI_GP:PDP76334.1;Name=PDP76334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583756.1;locus_tag=CLI76_10365;product=DNA topoisomerase III;protein_id=PDP76334.1;transl_table=11 NSLT01000089.1 Genbank gene 3420 3530 . - . ID=gene-CLI76_10370;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CLI76_10370 NSLT01000089.1 cmsearch rRNA 3420 3530 . - . ID=rna-CLI76_10370;Parent=gene-CLI76_10370;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10370;product=5S ribosomal RNA NSLT01000089.1 cmsearch exon 3420 3530 . - . ID=exon-CLI76_10370-1;Parent=rna-CLI76_10370;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_10370;product=5S ribosomal RNA ##sequence-region NSLT01000008.1 1 58470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000008.1 Genbank region 1 58470 . + . ID=NSLT01000008.1:1..58470;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000008.1 Genbank gene 205 1998 . + . ID=gene-CLI76_02535;Name=CLI76_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02535 NSLT01000008.1 Protein Homology CDS 205 1998 . + 0 ID=cds-PDP77706.1;Parent=gene-CLI76_02535;Dbxref=NCBI_GP:PDP77706.1;Name=PDP77706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964802.1;locus_tag=CLI76_02535;product=arginine--tRNA ligase;protein_id=PDP77706.1;transl_table=11 NSLT01000008.1 Genbank gene 2003 3088 . + . ID=gene-CLI76_02540;Name=CLI76_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02540 NSLT01000008.1 Protein Homology CDS 2003 3088 . + 0 ID=cds-PDP77707.1;Parent=gene-CLI76_02540;Dbxref=NCBI_GP:PDP77707.1;Name=PDP77707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457454.1;locus_tag=CLI76_02540;product=tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase;protein_id=PDP77707.1;transl_table=11 NSLT01000008.1 Genbank gene 3144 3908 . + . ID=gene-CLI76_02545;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=CLI76_02545 NSLT01000008.1 Protein Homology CDS 3144 3908 . + 0 ID=cds-PDP77708.1;Parent=gene-CLI76_02545;Dbxref=NCBI_GP:PDP77708.1;Name=PDP77708.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874493.1;locus_tag=CLI76_02545;product=exodeoxyribonuclease III;protein_id=PDP77708.1;transl_table=11 NSLT01000008.1 Genbank gene 3981 4907 . + . ID=gene-CLI76_02550;Name=CLI76_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02550 NSLT01000008.1 Protein Homology CDS 3981 4907 . + 0 ID=cds-PDP77709.1;Parent=gene-CLI76_02550;Dbxref=NCBI_GP:PDP77709.1;Name=PDP77709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964805.1;locus_tag=CLI76_02550;product=hydrogen peroxide-inducible genes activator;protein_id=PDP77709.1;transl_table=11 NSLT01000008.1 Genbank gene 4958 5428 . + . ID=gene-CLI76_02555;Name=CLI76_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02555 NSLT01000008.1 Protein Homology CDS 4958 5428 . + 0 ID=cds-PDP77710.1;Parent=gene-CLI76_02555;Dbxref=NCBI_GP:PDP77710.1;Name=PDP77710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964806.1;locus_tag=CLI76_02555;product=single-stranded DNA-binding protein;protein_id=PDP77710.1;transl_table=11 NSLT01000008.1 Genbank gene 5446 6774 . + . ID=gene-CLI76_02560;Name=CLI76_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02560 NSLT01000008.1 Protein Homology CDS 5446 6774 . + 0 ID=cds-PDP77711.1;Parent=gene-CLI76_02560;Dbxref=NCBI_GP:PDP77711.1;Name=PDP77711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583916.1;locus_tag=CLI76_02560;product=gliding motility-associated protein GldE;protein_id=PDP77711.1;transl_table=11 NSLT01000008.1 Genbank gene 6810 7406 . + . ID=gene-CLI76_02565;Name=CLI76_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02565 NSLT01000008.1 Protein Homology CDS 6810 7406 . + 0 ID=cds-PDP77712.1;Parent=gene-CLI76_02565;Dbxref=NCBI_GP:PDP77712.1;Name=PDP77712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815493.1;locus_tag=CLI76_02565;product=4'-phosphopantetheinyl transferase;protein_id=PDP77712.1;transl_table=11 NSLT01000008.1 Genbank pseudogene 7449 7773 . + . ID=gene-CLI76_02570;Name=CLI76_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02570;pseudo=true NSLT01000008.1 Protein Homology CDS 7449 7773 . + 0 ID=cds-CLI76_02570;Parent=gene-CLI76_02570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010955967.1;locus_tag=CLI76_02570;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000008.1 Genbank gene 7978 8487 . - . ID=gene-CLI76_02575;Name=CLI76_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02575 NSLT01000008.1 Protein Homology CDS 7978 8487 . - 0 ID=cds-PDP77713.1;Parent=gene-CLI76_02575;Dbxref=NCBI_GP:PDP77713.1;Name=PDP77713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874471.1;locus_tag=CLI76_02575;product=thiol reductase thioredoxin;protein_id=PDP77713.1;transl_table=11 NSLT01000008.1 Genbank gene 8631 9758 . - . ID=gene-CLI76_02580;Name=CLI76_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02580 NSLT01000008.1 Protein Homology CDS 8631 9758 . - 0 ID=cds-PDP77714.1;Parent=gene-CLI76_02580;Dbxref=NCBI_GP:PDP77714.1;Name=PDP77714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009432990.1;locus_tag=CLI76_02580;product=hypothetical protein;protein_id=PDP77714.1;transl_table=11 NSLT01000008.1 Genbank gene 9849 11513 . + . ID=gene-CLI76_02585;Name=CLI76_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02585 NSLT01000008.1 Protein Homology CDS 9849 11513 . + 0 ID=cds-PDP77715.1;Parent=gene-CLI76_02585;Dbxref=NCBI_GP:PDP77715.1;Name=PDP77715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583920.1;locus_tag=CLI76_02585;product=AAA family ATPase;protein_id=PDP77715.1;transl_table=11 NSLT01000008.1 Genbank gene 12601 13419 . + . ID=gene-CLI76_02590;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CLI76_02590 NSLT01000008.1 Protein Homology CDS 12601 13419 . + 0 ID=cds-PDP77716.1;Parent=gene-CLI76_02590;Dbxref=NCBI_GP:PDP77716.1;Name=PDP77716.1;gbkey=CDS;gene=kdsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815498.1;locus_tag=CLI76_02590;product=3-deoxy-8-phosphooctulonate synthase;protein_id=PDP77716.1;transl_table=11 NSLT01000008.1 Genbank gene 13667 15094 . + . ID=gene-CLI76_02595;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CLI76_02595 NSLT01000008.1 Protein Homology CDS 13667 15094 . + 0 ID=cds-PDP77717.1;Parent=gene-CLI76_02595;Dbxref=NCBI_GP:PDP77717.1;Name=PDP77717.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583923.1;locus_tag=CLI76_02595;product=aspartate ammonia-lyase;protein_id=PDP77717.1;transl_table=11 NSLT01000008.1 Genbank gene 15242 16150 . + . ID=gene-CLI76_02600;Name=CLI76_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02600 NSLT01000008.1 Protein Homology CDS 15242 16150 . + 0 ID=cds-PDP77718.1;Parent=gene-CLI76_02600;Dbxref=NCBI_GP:PDP77718.1;Name=PDP77718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583924.1;locus_tag=CLI76_02600;product=exopolyphosphatase;protein_id=PDP77718.1;transl_table=11 NSLT01000008.1 Genbank gene 16147 17181 . + . ID=gene-CLI76_02605;Name=CLI76_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02605 NSLT01000008.1 Protein Homology CDS 16147 17181 . + 0 ID=cds-PDP77719.1;Parent=gene-CLI76_02605;Dbxref=NCBI_GP:PDP77719.1;Name=PDP77719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956389.1;locus_tag=CLI76_02605;product=hypothetical protein;protein_id=PDP77719.1;transl_table=11 NSLT01000008.1 Genbank gene 17252 18211 . + . ID=gene-CLI76_02610;Name=CLI76_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02610 NSLT01000008.1 Protein Homology CDS 17252 18211 . + 0 ID=cds-PDP77720.1;Parent=gene-CLI76_02610;Dbxref=NCBI_GP:PDP77720.1;Name=PDP77720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006798199.1;locus_tag=CLI76_02610;product=ROK family protein;protein_id=PDP77720.1;transl_table=11 NSLT01000008.1 Genbank gene 18196 18750 . + . ID=gene-CLI76_02615;Name=CLI76_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02615 NSLT01000008.1 Protein Homology CDS 18196 18750 . + 0 ID=cds-PDP77721.1;Parent=gene-CLI76_02615;Dbxref=NCBI_GP:PDP77721.1;Name=PDP77721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956388.1;locus_tag=CLI76_02615;product=NUDIX domain-containing protein;protein_id=PDP77721.1;transl_table=11 NSLT01000008.1 Genbank gene 18747 19658 . + . ID=gene-CLI76_02620;Name=CLI76_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02620 NSLT01000008.1 Protein Homology CDS 18747 19658 . + 0 ID=cds-PDP77722.1;Parent=gene-CLI76_02620;Dbxref=NCBI_GP:PDP77722.1;Name=PDP77722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815502.1;locus_tag=CLI76_02620;product=transporter;protein_id=PDP77722.1;transl_table=11 NSLT01000008.1 Genbank gene 19655 20092 . + . ID=gene-CLI76_02625;Name=CLI76_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02625 NSLT01000008.1 Protein Homology CDS 19655 20092 . + 0 ID=cds-PDP77723.1;Parent=gene-CLI76_02625;Dbxref=NCBI_GP:PDP77723.1;Name=PDP77723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583929.1;locus_tag=CLI76_02625;product=DUF695 domain-containing protein;protein_id=PDP77723.1;transl_table=11 NSLT01000008.1 Genbank gene 20131 21057 . - . ID=gene-CLI76_02630;Name=CLI76_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02630 NSLT01000008.1 Protein Homology CDS 20131 21057 . - 0 ID=cds-PDP77724.1;Parent=gene-CLI76_02630;Dbxref=NCBI_GP:PDP77724.1;Name=PDP77724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964809.1;locus_tag=CLI76_02630;product=tyrosine recombinase XerD;protein_id=PDP77724.1;transl_table=11 NSLT01000008.1 Genbank gene 21175 21600 . + . ID=gene-CLI76_02635;Name=CLI76_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02635 NSLT01000008.1 Protein Homology CDS 21175 21600 . + 0 ID=cds-PDP77725.1;Parent=gene-CLI76_02635;Dbxref=NCBI_GP:PDP77725.1;Name=PDP77725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583931.1;locus_tag=CLI76_02635;product=3-dehydroquinate dehydratase;protein_id=PDP77725.1;transl_table=11 NSLT01000008.1 Genbank gene 21701 22351 . + . ID=gene-CLI76_02640;Name=CLI76_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02640 NSLT01000008.1 Protein Homology CDS 21701 22351 . + 0 ID=cds-PDP77726.1;Parent=gene-CLI76_02640;Dbxref=NCBI_GP:PDP77726.1;Name=PDP77726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874474.1;locus_tag=CLI76_02640;product=methyltransferase;protein_id=PDP77726.1;transl_table=11 NSLT01000008.1 Genbank gene 22433 22936 . + . ID=gene-CLI76_02645;Name=CLI76_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02645 NSLT01000008.1 Protein Homology CDS 22433 22936 . + 0 ID=cds-PDP77727.1;Parent=gene-CLI76_02645;Dbxref=NCBI_GP:PDP77727.1;Name=PDP77727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964814.1;locus_tag=CLI76_02645;product=lipid hydroperoxide peroxidase;protein_id=PDP77727.1;transl_table=11 NSLT01000008.1 Genbank gene 23132 23623 . - . ID=gene-CLI76_02650;Name=CLI76_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02650 NSLT01000008.1 Protein Homology CDS 23132 23623 . - 0 ID=cds-PDP77728.1;Parent=gene-CLI76_02650;Dbxref=NCBI_GP:PDP77728.1;Name=PDP77728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583934.1;locus_tag=CLI76_02650;product=nucleoside deaminase;protein_id=PDP77728.1;transl_table=11 NSLT01000008.1 Genbank gene 23657 24520 . - . ID=gene-CLI76_02655;Name=CLI76_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02655 NSLT01000008.1 Protein Homology CDS 23657 24520 . - 0 ID=cds-PDP77729.1;Parent=gene-CLI76_02655;Dbxref=NCBI_GP:PDP77729.1;Name=PDP77729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815508.1;locus_tag=CLI76_02655;product=hypothetical protein;protein_id=PDP77729.1;transl_table=11 NSLT01000008.1 Genbank gene 24530 25948 . - . ID=gene-CLI76_02660;Name=CLI76_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02660 NSLT01000008.1 Protein Homology CDS 24530 25948 . - 0 ID=cds-PDP77730.1;Parent=gene-CLI76_02660;Dbxref=NCBI_GP:PDP77730.1;Name=PDP77730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815509.1;locus_tag=CLI76_02660;product=signal protein PDZ;protein_id=PDP77730.1;transl_table=11 NSLT01000008.1 Genbank gene 25982 26464 . - . ID=gene-CLI76_02665;Name=CLI76_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02665 NSLT01000008.1 Protein Homology CDS 25982 26464 . - 0 ID=cds-PDP77753.1;Parent=gene-CLI76_02665;Dbxref=NCBI_GP:PDP77753.1;Name=PDP77753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457475.1;locus_tag=CLI76_02665;product=CinA family protein;protein_id=PDP77753.1;transl_table=11 NSLT01000008.1 Genbank gene 26467 27492 . - . ID=gene-CLI76_02670;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CLI76_02670 NSLT01000008.1 Protein Homology CDS 26467 27492 . - 0 ID=cds-PDP77731.1;Parent=gene-CLI76_02670;Dbxref=NCBI_GP:PDP77731.1;Name=PDP77731.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583938.1;locus_tag=CLI76_02670;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=PDP77731.1;transl_table=11 NSLT01000008.1 Genbank gene 27774 27845 . - . ID=gene-CLI76_02675;Name=CLI76_02675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_02675 NSLT01000008.1 tRNAscan-SE tRNA 27774 27845 . - . ID=rna-CLI76_02675;Parent=gene-CLI76_02675;anticodon=(pos:complement(27810..27812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02675;product=tRNA-Glu NSLT01000008.1 tRNAscan-SE exon 27774 27845 . - . ID=exon-CLI76_02675-1;Parent=rna-CLI76_02675;anticodon=(pos:complement(27810..27812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02675;product=tRNA-Glu NSLT01000008.1 Genbank gene 27910 28164 . - . ID=gene-CLI76_02680;Name=CLI76_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02680 NSLT01000008.1 Protein Homology CDS 27910 28164 . - 0 ID=cds-PDP77732.1;Parent=gene-CLI76_02680;Dbxref=NCBI_GP:PDP77732.1;Name=PDP77732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874497.1;locus_tag=CLI76_02680;product=30S ribosomal protein S20;protein_id=PDP77732.1;transl_table=11 NSLT01000008.1 Genbank gene 28194 28265 . - . ID=gene-CLI76_02685;Name=CLI76_02685;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_02685 NSLT01000008.1 tRNAscan-SE tRNA 28194 28265 . - . ID=rna-CLI76_02685;Parent=gene-CLI76_02685;anticodon=(pos:complement(28230..28232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02685;product=tRNA-Glu NSLT01000008.1 tRNAscan-SE exon 28194 28265 . - . ID=exon-CLI76_02685-1;Parent=rna-CLI76_02685;anticodon=(pos:complement(28230..28232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02685;product=tRNA-Glu NSLT01000008.1 Genbank gene 28345 28689 . + . ID=gene-CLI76_02690;Name=CLI76_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02690 NSLT01000008.1 Protein Homology CDS 28345 28689 . + 0 ID=cds-PDP77733.1;Parent=gene-CLI76_02690;Dbxref=NCBI_GP:PDP77733.1;Name=PDP77733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583940.1;locus_tag=CLI76_02690;product=hypothetical protein;protein_id=PDP77733.1;transl_table=11 NSLT01000008.1 Genbank gene 28841 31036 . - . ID=gene-CLI76_02695;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CLI76_02695 NSLT01000008.1 Protein Homology CDS 28841 31036 . - 0 ID=cds-PDP77734.1;Parent=gene-CLI76_02695;Dbxref=NCBI_GP:PDP77734.1;Name=PDP77734.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583941.1;locus_tag=CLI76_02695;product=ribonuclease R;protein_id=PDP77734.1;transl_table=11 NSLT01000008.1 Genbank gene 31089 32600 . - . ID=gene-CLI76_02700;Name=CLI76_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02700 NSLT01000008.1 Protein Homology CDS 31089 32600 . - 0 ID=cds-PDP77735.1;Parent=gene-CLI76_02700;Dbxref=NCBI_GP:PDP77735.1;Name=PDP77735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874476.1;locus_tag=CLI76_02700;product=hypothetical protein;protein_id=PDP77735.1;transl_table=11 NSLT01000008.1 Genbank gene 32634 34484 . - . ID=gene-CLI76_02705;Name=CLI76_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02705 NSLT01000008.1 Protein Homology CDS 32634 34484 . - 0 ID=cds-PDP77736.1;Parent=gene-CLI76_02705;Dbxref=NCBI_GP:PDP77736.1;Name=PDP77736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964824.1;locus_tag=CLI76_02705;product=antibiotic ABC transporter ATP-binding protein;protein_id=PDP77736.1;transl_table=11 NSLT01000008.1 Genbank pseudogene 34476 34750 . + . ID=gene-CLI76_02710;Name=CLI76_02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02710;pseudo=true NSLT01000008.1 Protein Homology CDS 34476 34750 . + 0 ID=cds-CLI76_02710;Parent=gene-CLI76_02710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956380.1;locus_tag=CLI76_02710;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000008.1 Genbank gene 35109 37889 . + . ID=gene-CLI76_02715;Name=CLI76_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02715 NSLT01000008.1 Protein Homology CDS 35109 37889 . + 0 ID=cds-PDP77737.1;Parent=gene-CLI76_02715;Dbxref=NCBI_GP:PDP77737.1;Name=PDP77737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457482.1;locus_tag=CLI76_02715;product=hypothetical protein;protein_id=PDP77737.1;transl_table=11 NSLT01000008.1 Genbank pseudogene 38172 38366 . - . ID=gene-CLI76_02720;Name=CLI76_02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02720;pseudo=true NSLT01000008.1 Protein Homology CDS 38172 38366 . - 0 ID=cds-CLI76_02720;Parent=gene-CLI76_02720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816478.1;locus_tag=CLI76_02720;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000008.1 Genbank gene 39183 39827 . + . ID=gene-CLI76_02725;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CLI76_02725 NSLT01000008.1 Protein Homology CDS 39183 39827 . + 0 ID=cds-PDP77738.1;Parent=gene-CLI76_02725;Dbxref=NCBI_GP:PDP77738.1;Name=PDP77738.1;gbkey=CDS;gene=pdxH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013760864.1;locus_tag=CLI76_02725;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=PDP77738.1;transl_table=11 NSLT01000008.1 Genbank gene 39864 40268 . + . ID=gene-CLI76_02730;Name=CLI76_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02730 NSLT01000008.1 Protein Homology CDS 39864 40268 . + 0 ID=cds-PDP77739.1;Parent=gene-CLI76_02730;Dbxref=NCBI_GP:PDP77739.1;Name=PDP77739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956378.1;locus_tag=CLI76_02730;product=rhodanese-like domain-containing protein;protein_id=PDP77739.1;transl_table=11 NSLT01000008.1 Genbank gene 40350 42695 . + . ID=gene-CLI76_02735;Name=CLI76_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02735 NSLT01000008.1 Protein Homology CDS 40350 42695 . + 0 ID=cds-PDP77740.1;Parent=gene-CLI76_02735;Dbxref=NCBI_GP:PDP77740.1;Name=PDP77740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457486.1;locus_tag=CLI76_02735;product=alpha-mannosidase;protein_id=PDP77740.1;transl_table=11 NSLT01000008.1 Genbank gene 42720 45023 . + . ID=gene-CLI76_02740;Name=CLI76_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02740 NSLT01000008.1 Protein Homology CDS 42720 45023 . + 0 ID=cds-PDP77741.1;Parent=gene-CLI76_02740;Dbxref=NCBI_GP:PDP77741.1;Name=PDP77741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457487.1;locus_tag=CLI76_02740;product=alpha-mannosidase;protein_id=PDP77741.1;transl_table=11 NSLT01000008.1 Genbank pseudogene 44970 45200 . - . ID=gene-CLI76_02745;Name=CLI76_02745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02745;pseudo=true NSLT01000008.1 Protein Homology CDS 44970 45200 . - 0 ID=cds-CLI76_02745;Parent=gene-CLI76_02745;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874236.1;locus_tag=CLI76_02745;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000008.1 Genbank gene 45181 45375 . - . ID=gene-CLI76_02750;Name=CLI76_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02750 NSLT01000008.1 Protein Homology CDS 45181 45375 . - 0 ID=cds-PDP77742.1;Parent=gene-CLI76_02750;Dbxref=NCBI_GP:PDP77742.1;Name=PDP77742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583948.1;locus_tag=CLI76_02750;product=hypothetical protein;protein_id=PDP77742.1;transl_table=11 NSLT01000008.1 Genbank gene 45570 45923 . + . ID=gene-CLI76_02755;Name=CLI76_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02755 NSLT01000008.1 Protein Homology CDS 45570 45923 . + 0 ID=cds-PDP77743.1;Parent=gene-CLI76_02755;Dbxref=NCBI_GP:PDP77743.1;Name=PDP77743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583949.1;locus_tag=CLI76_02755;product=septum formation initiator;protein_id=PDP77743.1;transl_table=11 NSLT01000008.1 Genbank gene 45944 46306 . + . ID=gene-CLI76_02760;Name=CLI76_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02760 NSLT01000008.1 Protein Homology CDS 45944 46306 . + 0 ID=cds-PDP77744.1;Parent=gene-CLI76_02760;Dbxref=NCBI_GP:PDP77744.1;Name=PDP77744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583950.1;locus_tag=CLI76_02760;product=hypothetical protein;protein_id=PDP77744.1;transl_table=11 NSLT01000008.1 Genbank gene 46326 47300 . + . ID=gene-CLI76_02765;Name=CLI76_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02765 NSLT01000008.1 Protein Homology CDS 46326 47300 . + 0 ID=cds-PDP77745.1;Parent=gene-CLI76_02765;Dbxref=NCBI_GP:PDP77745.1;Name=PDP77745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583951.1;locus_tag=CLI76_02765;product=RNA pseudouridine synthase;protein_id=PDP77745.1;transl_table=11 NSLT01000008.1 Genbank gene 47336 49384 . + . ID=gene-CLI76_02770;Name=CLI76_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02770 NSLT01000008.1 Protein Homology CDS 47336 49384 . + 0 ID=cds-PDP77746.1;Parent=gene-CLI76_02770;Dbxref=NCBI_GP:PDP77746.1;Name=PDP77746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815524.1;locus_tag=CLI76_02770;product=thiol:disulfide interchange protein;protein_id=PDP77746.1;transl_table=11 NSLT01000008.1 Genbank gene 49402 50187 . + . ID=gene-CLI76_02775;Name=CLI76_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02775 NSLT01000008.1 Protein Homology CDS 49402 50187 . + 0 ID=cds-PDP77747.1;Parent=gene-CLI76_02775;Dbxref=NCBI_GP:PDP77747.1;Name=PDP77747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004583953.1;locus_tag=CLI76_02775;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=PDP77747.1;transl_table=11 NSLT01000008.1 Genbank gene 50245 52209 . + . ID=gene-CLI76_02780;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CLI76_02780 NSLT01000008.1 Protein Homology CDS 50245 52209 . + 0 ID=cds-PDP77748.1;Parent=gene-CLI76_02780;Dbxref=NCBI_GP:PDP77748.1;Name=PDP77748.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008779230.1;locus_tag=CLI76_02780;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=PDP77748.1;transl_table=11 NSLT01000008.1 Genbank gene 52202 54010 . + . ID=gene-CLI76_02785;Name=CLI76_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02785 NSLT01000008.1 Protein Homology CDS 52202 54010 . + 0 ID=cds-PDP77749.1;Parent=gene-CLI76_02785;Dbxref=NCBI_GP:PDP77749.1;Name=PDP77749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815525.1;locus_tag=CLI76_02785;product=fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase;protein_id=PDP77749.1;transl_table=11 NSLT01000008.1 Genbank gene 54737 57271 . + . ID=gene-CLI76_02790;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CLI76_02790 NSLT01000008.1 Protein Homology CDS 54737 57271 . + 0 ID=cds-PDP77750.1;Parent=gene-CLI76_02790;Dbxref=NCBI_GP:PDP77750.1;Name=PDP77750.1;gbkey=CDS;gene=feoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816689.1;locus_tag=CLI76_02790;product=ferrous iron transport protein B;protein_id=PDP77750.1;transl_table=11 NSLT01000008.1 Genbank gene 57291 57476 . + . ID=gene-CLI76_02795;Name=CLI76_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02795 NSLT01000008.1 Protein Homology CDS 57291 57476 . + 0 ID=cds-PDP77751.1;Parent=gene-CLI76_02795;Dbxref=NCBI_GP:PDP77751.1;Name=PDP77751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964877.1;locus_tag=CLI76_02795;product=FeoB-associated Cys-rich membrane protein;protein_id=PDP77751.1;transl_table=11 NSLT01000008.1 Genbank gene 57484 57939 . + . ID=gene-CLI76_02800;Name=CLI76_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02800 NSLT01000008.1 Protein Homology CDS 57484 57939 . + 0 ID=cds-PDP77752.1;Parent=gene-CLI76_02800;Dbxref=NCBI_GP:PDP77752.1;Name=PDP77752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874841.1;locus_tag=CLI76_02800;product=hypothetical protein;protein_id=PDP77752.1;transl_table=11 NSLT01000008.1 Genbank gene 58098 58470 . + . ID=gene-CLI76_02805;Name=CLI76_02805;end_range=58470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02805;partial=true NSLT01000008.1 Protein Homology CDS 58098 58470 . + 0 ID=cds-PDP77754.1;Parent=gene-CLI76_02805;Dbxref=NCBI_GP:PDP77754.1;Name=PDP77754.1;end_range=58470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_02805;partial=true;product=IS3 family transposase;protein_id=PDP77754.1;transl_table=11 ##sequence-region NSLT01000090.1 1 3404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000090.1 Genbank region 1 3404 . + . ID=NSLT01000090.1:1..3404;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000090.1 Genbank gene 1 650 . - . ID=gene-CLI76_10375;Name=CLI76_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10375;partial=true;start_range=.,1 NSLT01000090.1 Protein Homology CDS 1 650 . - 0 ID=cds-PDP76329.1;Parent=gene-CLI76_10375;Dbxref=NCBI_GP:PDP76329.1;Name=PDP76329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585389.1;locus_tag=CLI76_10375;partial=true;product=relaxase;protein_id=PDP76329.1;start_range=.,1;transl_table=11 NSLT01000090.1 Genbank gene 635 1036 . - . ID=gene-CLI76_10380;Name=CLI76_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10380 NSLT01000090.1 Protein Homology CDS 635 1036 . - 0 ID=cds-PDP76330.1;Parent=gene-CLI76_10380;Dbxref=NCBI_GP:PDP76330.1;Name=PDP76330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874554.1;locus_tag=CLI76_10380;product=hypothetical protein;protein_id=PDP76330.1;transl_table=11 NSLT01000090.1 Genbank pseudogene 1064 1312 . - . ID=gene-CLI76_10385;Name=CLI76_10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10385;pseudo=true NSLT01000090.1 Protein Homology CDS 1064 1312 . - 0 ID=cds-CLI76_10385;Parent=gene-CLI76_10385;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816535.1;locus_tag=CLI76_10385;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000090.1 Genbank gene 1667 2476 . + . ID=gene-CLI76_10390;Name=CLI76_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10390 NSLT01000090.1 Protein Homology CDS 1667 2476 . + 0 ID=cds-PDP76331.1;Parent=gene-CLI76_10390;Dbxref=NCBI_GP:PDP76331.1;Name=PDP76331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004585391.1;locus_tag=CLI76_10390;product=ParA family protein;protein_id=PDP76331.1;transl_table=11 NSLT01000090.1 Genbank gene 2463 2849 . + . ID=gene-CLI76_10395;Name=CLI76_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10395 NSLT01000090.1 Protein Homology CDS 2463 2849 . + 0 ID=cds-PDP76332.1;Parent=gene-CLI76_10395;Dbxref=NCBI_GP:PDP76332.1;Name=PDP76332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816537.1;locus_tag=CLI76_10395;product=DUF3408 domain-containing protein;protein_id=PDP76332.1;transl_table=11 NSLT01000090.1 Genbank gene 2854 3404 . + . ID=gene-CLI76_10400;Name=CLI76_10400;end_range=3404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10400;partial=true NSLT01000090.1 Protein Homology CDS 2854 3404 . + 0 ID=cds-PDP76333.1;Parent=gene-CLI76_10400;Dbxref=NCBI_GP:PDP76333.1;Name=PDP76333.1;end_range=3404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816538.1;locus_tag=CLI76_10400;partial=true;product=hypothetical protein;protein_id=PDP76333.1;transl_table=11 ##sequence-region NSLT01000091.1 1 3322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000091.1 Genbank region 1 3322 . + . ID=NSLT01000091.1:1..3322;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000091.1 Genbank gene 88 1020 . - . ID=gene-CLI76_10405;Name=CLI76_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10405 NSLT01000091.1 Protein Homology CDS 88 1020 . - 0 ID=cds-PDP76325.1;Parent=gene-CLI76_10405;Dbxref=NCBI_GP:PDP76325.1;Name=PDP76325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014298381.1;locus_tag=CLI76_10405;product=site-specific integrase;protein_id=PDP76325.1;transl_table=11 NSLT01000091.1 Genbank gene 1121 2254 . + . ID=gene-CLI76_10410;Name=CLI76_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10410 NSLT01000091.1 Protein Homology CDS 1121 2254 . + 0 ID=cds-PDP76326.1;Parent=gene-CLI76_10410;Dbxref=NCBI_GP:PDP76326.1;Name=PDP76326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=CLI76_10410;product=restriction endonuclease subunit S;protein_id=PDP76326.1;transl_table=11 NSLT01000091.1 Genbank gene 2272 2712 . + . ID=gene-CLI76_10415;Name=CLI76_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10415 NSLT01000091.1 GeneMarkS+ CDS 2272 2712 . + 0 ID=cds-PDP76327.1;Parent=gene-CLI76_10415;Dbxref=NCBI_GP:PDP76327.1;Name=PDP76327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10415;product=hypothetical protein;protein_id=PDP76327.1;transl_table=11 NSLT01000091.1 Genbank gene 3016 3219 . - . ID=gene-CLI76_10420;Name=CLI76_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10420 NSLT01000091.1 GeneMarkS+ CDS 3016 3219 . - 0 ID=cds-PDP76328.1;Parent=gene-CLI76_10420;Dbxref=NCBI_GP:PDP76328.1;Name=PDP76328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10420;product=hypothetical protein;protein_id=PDP76328.1;transl_table=11 ##sequence-region NSLT01000092.1 1 3266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000092.1 Genbank region 1 3266 . + . ID=NSLT01000092.1:1..3266;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000092.1 Genbank pseudogene 44 2296 . - . ID=gene-CLI76_10425;Name=CLI76_10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10425;pseudo=true NSLT01000092.1 Protein Homology CDS 44 2296 . - 0 ID=cds-CLI76_10425;Parent=gene-CLI76_10425;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009752254.1;locus_tag=CLI76_10425;product=helicase;pseudo=true;transl_table=11 NSLT01000092.1 Genbank gene 2299 2502 . - . ID=gene-CLI76_10430;Name=CLI76_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10430 NSLT01000092.1 Protein Homology CDS 2299 2502 . - 0 ID=cds-PDP76323.1;Parent=gene-CLI76_10430;Dbxref=NCBI_GP:PDP76323.1;Name=PDP76323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006951633.1;locus_tag=CLI76_10430;product=transcriptional regulator;protein_id=PDP76323.1;transl_table=11 NSLT01000092.1 Genbank gene 2744 3266 . + . ID=gene-CLI76_10435;Name=CLI76_10435;end_range=3266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10435;partial=true NSLT01000092.1 Protein Homology CDS 2744 3266 . + 0 ID=cds-PDP76324.1;Parent=gene-CLI76_10435;Dbxref=NCBI_GP:PDP76324.1;Name=PDP76324.1;end_range=3266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004352631.1;locus_tag=CLI76_10435;partial=true;product=hypothetical protein;protein_id=PDP76324.1;transl_table=11 ##sequence-region NSLT01000093.1 1 3231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000093.1 Genbank region 1 3231 . + . ID=NSLT01000093.1:1..3231;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000093.1 Genbank gene 128 913 . + . ID=gene-CLI76_10440;Name=CLI76_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10440 NSLT01000093.1 Protein Homology CDS 128 913 . + 0 ID=cds-PDP76318.1;Parent=gene-CLI76_10440;Dbxref=NCBI_GP:PDP76318.1;Name=PDP76318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964951.1;locus_tag=CLI76_10440;product=conjugal transfer protein TraA;protein_id=PDP76318.1;transl_table=11 NSLT01000093.1 Genbank gene 917 1378 . + . ID=gene-CLI76_10445;Name=CLI76_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10445 NSLT01000093.1 Protein Homology CDS 917 1378 . + 0 ID=cds-PDP76319.1;Parent=gene-CLI76_10445;Dbxref=NCBI_GP:PDP76319.1;Name=PDP76319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964950.1;locus_tag=CLI76_10445;product=DUF3408 domain-containing protein;protein_id=PDP76319.1;transl_table=11 NSLT01000093.1 Genbank gene 1378 2103 . + . ID=gene-CLI76_10450;Name=CLI76_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10450 NSLT01000093.1 GeneMarkS+ CDS 1378 2103 . + 0 ID=cds-PDP76320.1;Parent=gene-CLI76_10450;Dbxref=NCBI_GP:PDP76320.1;Name=PDP76320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10450;product=hypothetical protein;protein_id=PDP76320.1;transl_table=11 NSLT01000093.1 Genbank gene 2252 2554 . + . ID=gene-CLI76_10455;Name=CLI76_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10455 NSLT01000093.1 Protein Homology CDS 2252 2554 . + 0 ID=cds-PDP76321.1;Parent=gene-CLI76_10455;Dbxref=NCBI_GP:PDP76321.1;Name=PDP76321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004359303.1;locus_tag=CLI76_10455;product=DUF4134 domain-containing protein;protein_id=PDP76321.1;transl_table=11 NSLT01000093.1 Genbank gene 2554 2886 . + . ID=gene-CLI76_10460;Name=CLI76_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10460 NSLT01000093.1 Protein Homology CDS 2554 2886 . + 0 ID=cds-PDP76322.1;Parent=gene-CLI76_10460;Dbxref=NCBI_GP:PDP76322.1;Name=PDP76322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018964947.1;locus_tag=CLI76_10460;product=conjugal transfer protein TraF;protein_id=PDP76322.1;transl_table=11 NSLT01000093.1 Genbank pseudogene 2883 3107 . + . ID=gene-CLI76_10465;Name=CLI76_10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10465;pseudo=true NSLT01000093.1 Protein Homology CDS 2883 3107 . + 0 ID=cds-CLI76_10465;Parent=gene-CLI76_10465;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004346337.1;locus_tag=CLI76_10465;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NSLT01000094.1 1 3148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000094.1 Genbank region 1 3148 . + . ID=NSLT01000094.1:1..3148;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000094.1 Genbank gene 1 442 . + . ID=gene-CLI76_10470;Name=CLI76_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10470;partial=true;start_range=.,1 NSLT01000094.1 Protein Homology CDS 1 442 . + 1 ID=cds-PDP76315.1;Parent=gene-CLI76_10470;Dbxref=NCBI_GP:PDP76315.1;Name=PDP76315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874569.1;locus_tag=CLI76_10470;partial=true;product=conjugal transfer protein TraG;protein_id=PDP76315.1;start_range=.,1;transl_table=11 NSLT01000094.1 Genbank gene 843 1061 . + . ID=gene-CLI76_10475;Name=CLI76_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10475 NSLT01000094.1 Protein Homology CDS 843 1061 . + 0 ID=cds-PDP76317.1;Parent=gene-CLI76_10475;Dbxref=NCBI_GP:PDP76317.1;Name=PDP76317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019036496.1;locus_tag=CLI76_10475;product=transcriptional regulator;protein_id=PDP76317.1;transl_table=11 NSLT01000094.1 Genbank gene 1106 3148 . + . ID=gene-CLI76_10480;Name=CLI76_10480;end_range=3148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10480;partial=true NSLT01000094.1 GeneMarkS+ CDS 1106 3148 . + 0 ID=cds-PDP76316.1;Parent=gene-CLI76_10480;Dbxref=NCBI_GP:PDP76316.1;Name=PDP76316.1;end_range=3148,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10480;partial=true;product=hypothetical protein;protein_id=PDP76316.1;transl_table=11 ##sequence-region NSLT01000095.1 1 3128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000095.1 Genbank region 1 3128 . + . ID=NSLT01000095.1:1..3128;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000095.1 Genbank gene 1 821 . + . ID=gene-CLI76_10485;Name=CLI76_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10485;partial=true;start_range=.,1 NSLT01000095.1 Protein Homology CDS 1 821 . + 2 ID=cds-PDP76313.1;Parent=gene-CLI76_10485;Dbxref=NCBI_GP:PDP76313.1;Name=PDP76313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013671957.1;locus_tag=CLI76_10485;partial=true;product=conjugal transfer protein TraG;protein_id=PDP76313.1;start_range=.,1;transl_table=11 NSLT01000095.1 Genbank gene 869 3052 . - . ID=gene-CLI76_10490;Name=CLI76_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10490 NSLT01000095.1 GeneMarkS+ CDS 869 3052 . - 0 ID=cds-PDP76314.1;Parent=gene-CLI76_10490;Dbxref=NCBI_GP:PDP76314.1;Name=PDP76314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10490;product=hypothetical protein;protein_id=PDP76314.1;transl_table=11 ##sequence-region NSLT01000096.1 1 3093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000096.1 Genbank region 1 3093 . + . ID=NSLT01000096.1:1..3093;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000096.1 Genbank pseudogene 11 325 . - . ID=gene-CLI76_10495;Name=CLI76_10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10495;pseudo=true NSLT01000096.1 Protein Homology CDS 11 325 . - 0 ID=cds-CLI76_10495;Parent=gene-CLI76_10495;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10495;product=IS3 family transposase;pseudo=true;transl_table=11 NSLT01000096.1 Genbank gene 468 1553 . - . ID=gene-CLI76_10500;Name=CLI76_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10500 NSLT01000096.1 Protein Homology CDS 468 1553 . - 0 ID=cds-PDP76311.1;Parent=gene-CLI76_10500;Dbxref=NCBI_GP:PDP76311.1;Name=PDP76311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956028.1;locus_tag=CLI76_10500;product=IS5/IS1182 family transposase;protein_id=PDP76311.1;transl_table=11 NSLT01000096.1 Genbank gene 1658 1837 . - . ID=gene-CLI76_10505;Name=CLI76_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10505 NSLT01000096.1 Protein Homology CDS 1658 1837 . - 0 ID=cds-PDP76312.1;Parent=gene-CLI76_10505;Dbxref=NCBI_GP:PDP76312.1;Name=PDP76312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458609.1;locus_tag=CLI76_10505;product=hypothetical protein;protein_id=PDP76312.1;transl_table=11 NSLT01000096.1 Genbank pseudogene 1967 3093 . - . ID=gene-CLI76_10510;Name=CLI76_10510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10510;pseudo=true NSLT01000096.1 Protein Homology CDS 1967 3093 . - 0 ID=cds-CLI76_10510;Parent=gene-CLI76_10510;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_10510;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NSLT01000097.1 1 3073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000097.1 Genbank region 1 3073 . + . ID=NSLT01000097.1:1..3073;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000097.1 Genbank gene 1 821 . - . ID=gene-CLI76_10515;Name=CLI76_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10515;partial=true;start_range=.,1 NSLT01000097.1 Protein Homology CDS 1 821 . - 0 ID=cds-PDP76308.1;Parent=gene-CLI76_10515;Dbxref=NCBI_GP:PDP76308.1;Name=PDP76308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=CLI76_10515;partial=true;product=hypothetical protein;protein_id=PDP76308.1;start_range=.,1;transl_table=11 NSLT01000097.1 Genbank gene 825 1376 . - . ID=gene-CLI76_10520;Name=CLI76_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10520 NSLT01000097.1 Protein Homology CDS 825 1376 . - 0 ID=cds-PDP76309.1;Parent=gene-CLI76_10520;Dbxref=NCBI_GP:PDP76309.1;Name=PDP76309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010538146.1;locus_tag=CLI76_10520;product=cell filamentation protein Fic;protein_id=PDP76309.1;transl_table=11 NSLT01000097.1 Genbank gene 1383 2987 . - . ID=gene-CLI76_10525;Name=CLI76_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10525 NSLT01000097.1 Protein Homology CDS 1383 2987 . - 0 ID=cds-PDP76310.1;Parent=gene-CLI76_10525;Dbxref=NCBI_GP:PDP76310.1;Name=PDP76310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004304897.1;locus_tag=CLI76_10525;product=type I restriction-modification system subunit M;protein_id=PDP76310.1;transl_table=11 ##sequence-region NSLT01000098.1 1 3029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000098.1 Genbank region 1 3029 . + . ID=NSLT01000098.1:1..3029;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000098.1 Genbank gene 1 803 . + . ID=gene-CLI76_10530;Name=CLI76_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10530;partial=true;start_range=.,1 NSLT01000098.1 GeneMarkS+ CDS 1 803 . + 2 ID=cds-PDP76304.1;Parent=gene-CLI76_10530;Dbxref=NCBI_GP:PDP76304.1;Name=PDP76304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CLI76_10530;partial=true;product=hypothetical protein;protein_id=PDP76304.1;start_range=.,1;transl_table=11 NSLT01000098.1 Genbank gene 1133 1828 . - . ID=gene-CLI76_10535;Name=CLI76_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10535 NSLT01000098.1 Protein Homology CDS 1133 1828 . - 0 ID=cds-PDP76305.1;Parent=gene-CLI76_10535;Dbxref=NCBI_GP:PDP76305.1;Name=PDP76305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874182.1;locus_tag=CLI76_10535;product=hypothetical protein;protein_id=PDP76305.1;transl_table=11 NSLT01000098.1 Genbank gene 1825 2748 . - . ID=gene-CLI76_10540;Name=CLI76_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10540 NSLT01000098.1 Protein Homology CDS 1825 2748 . - 0 ID=cds-PDP76306.1;Parent=gene-CLI76_10540;Dbxref=NCBI_GP:PDP76306.1;Name=PDP76306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874212.1;locus_tag=CLI76_10540;product=mobilization protein;protein_id=PDP76306.1;transl_table=11 NSLT01000098.1 Genbank gene 2745 3029 . - . ID=gene-CLI76_10545;Name=CLI76_10545;end_range=3029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10545;partial=true NSLT01000098.1 Protein Homology CDS 2745 3029 . - 0 ID=cds-PDP76307.1;Parent=gene-CLI76_10545;Dbxref=NCBI_GP:PDP76307.1;Name=PDP76307.1;end_range=3029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874217.1;locus_tag=CLI76_10545;partial=true;product=plasmid mobilization relaxosome protein MobC;protein_id=PDP76307.1;transl_table=11 ##sequence-region NSLT01000099.1 1 2962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000099.1 Genbank region 1 2962 . + . ID=NSLT01000099.1:1..2962;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000099.1 Genbank pseudogene 829 1290 . - . ID=gene-CLI76_10550;Name=CLI76_10550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10550;pseudo=true NSLT01000099.1 Protein Homology CDS 829 1290 . - 0 ID=cds-CLI76_10550;Parent=gene-CLI76_10550;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012458559.1;locus_tag=CLI76_10550;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 NSLT01000099.1 Genbank pseudogene 1338 1782 . - . ID=gene-CLI76_10555;Name=CLI76_10555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_10555;pseudo=true NSLT01000099.1 Protein Homology CDS 1338 1782 . - 0 ID=cds-CLI76_10555;Parent=gene-CLI76_10555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873991.1;locus_tag=CLI76_10555;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000099.1 Genbank gene 2427 2876 . - . ID=gene-CLI76_10560;Name=CLI76_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_10560 NSLT01000099.1 Protein Homology CDS 2427 2876 . - 0 ID=cds-PDP76303.1;Parent=gene-CLI76_10560;Dbxref=NCBI_GP:PDP76303.1;Name=PDP76303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013815208.1;locus_tag=CLI76_10560;product=hypothetical protein;protein_id=PDP76303.1;transl_table=11 ##sequence-region NSLT01000009.1 1 58156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=837 NSLT01000009.1 Genbank region 1 58156 . + . ID=NSLT01000009.1:1..58156;Dbxref=taxon:837;collected-by=Willam Wade;country=United Kingdom: London;gbkey=Src;isolation-source=Subgingival plaque;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WW2885 NSLT01000009.1 Genbank pseudogene 9 246 . + . ID=gene-CLI76_02810;Name=CLI76_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02810;pseudo=true NSLT01000009.1 Protein Homology CDS 9 246 . + 0 ID=cds-CLI76_02810;Parent=gene-CLI76_02810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816703.1;locus_tag=CLI76_02810;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000009.1 Genbank gene 429 815 . - . ID=gene-CLI76_02815;Name=CLI76_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02815 NSLT01000009.1 Protein Homology CDS 429 815 . - 0 ID=cds-PDP77659.1;Parent=gene-CLI76_02815;Dbxref=NCBI_GP:PDP77659.1;Name=PDP77659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457333.1;locus_tag=CLI76_02815;product=hypothetical protein;protein_id=PDP77659.1;transl_table=11 NSLT01000009.1 Genbank gene 852 2024 . - . ID=gene-CLI76_02820;Name=CLI76_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02820 NSLT01000009.1 Protein Homology CDS 852 2024 . - 0 ID=cds-PDP77660.1;Parent=gene-CLI76_02820;Dbxref=NCBI_GP:PDP77660.1;Name=PDP77660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873762.1;locus_tag=CLI76_02820;product=ATP-binding protein;protein_id=PDP77660.1;transl_table=11 NSLT01000009.1 Genbank gene 2270 2746 . - . ID=gene-CLI76_02825;Name=CLI76_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02825 NSLT01000009.1 Protein Homology CDS 2270 2746 . - 0 ID=cds-PDP77661.1;Parent=gene-CLI76_02825;Dbxref=NCBI_GP:PDP77661.1;Name=PDP77661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816077.1;locus_tag=CLI76_02825;product=hypothetical protein;protein_id=PDP77661.1;transl_table=11 NSLT01000009.1 Genbank gene 2758 4059 . - . ID=gene-CLI76_02830;Name=CLI76_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02830 NSLT01000009.1 Protein Homology CDS 2758 4059 . - 0 ID=cds-PDP77662.1;Parent=gene-CLI76_02830;Dbxref=NCBI_GP:PDP77662.1;Name=PDP77662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873749.1;locus_tag=CLI76_02830;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=PDP77662.1;transl_table=11 NSLT01000009.1 Genbank gene 4049 5041 . - . ID=gene-CLI76_02835;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CLI76_02835 NSLT01000009.1 Protein Homology CDS 4049 5041 . - 0 ID=cds-PDP77704.1;Parent=gene-CLI76_02835;Dbxref=NCBI_GP:PDP77704.1;Name=PDP77704.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956492.1;locus_tag=CLI76_02835;product=biotin synthase BioB;protein_id=PDP77704.1;transl_table=11 NSLT01000009.1 Genbank gene 5220 6752 . - . ID=gene-CLI76_02840;Name=CLI76_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02840 NSLT01000009.1 Protein Homology CDS 5220 6752 . - 0 ID=cds-PDP77663.1;Parent=gene-CLI76_02840;Dbxref=NCBI_GP:PDP77663.1;Name=PDP77663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965208.1;locus_tag=CLI76_02840;product=MFS transporter;protein_id=PDP77663.1;transl_table=11 NSLT01000009.1 Genbank gene 6778 7869 . - . ID=gene-CLI76_02845;Name=CLI76_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02845 NSLT01000009.1 Protein Homology CDS 6778 7869 . - 0 ID=cds-PDP77664.1;Parent=gene-CLI76_02845;Dbxref=NCBI_GP:PDP77664.1;Name=PDP77664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584704.1;locus_tag=CLI76_02845;product=DUF4831 domain-containing protein;protein_id=PDP77664.1;transl_table=11 NSLT01000009.1 Genbank gene 8345 8743 . + . ID=gene-CLI76_02850;Name=CLI76_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02850 NSLT01000009.1 Protein Homology CDS 8345 8743 . + 0 ID=cds-PDP77665.1;Parent=gene-CLI76_02850;Dbxref=NCBI_GP:PDP77665.1;Name=PDP77665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873428.1%2CRefSeq:WP_010956252.1;locus_tag=CLI76_02850;product=hypothetical protein;protein_id=PDP77665.1;transl_table=11 NSLT01000009.1 Genbank gene 8952 9935 . + . ID=gene-CLI76_02855;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CLI76_02855 NSLT01000009.1 Protein Homology CDS 8952 9935 . + 0 ID=cds-PDP77666.1;Parent=gene-CLI76_02855;Dbxref=NCBI_GP:PDP77666.1;Name=PDP77666.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965789.1;locus_tag=CLI76_02855;product=tryptophan--tRNA ligase;protein_id=PDP77666.1;transl_table=11 NSLT01000009.1 Genbank gene 9990 10409 . + . ID=gene-CLI76_02860;Name=CLI76_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02860 NSLT01000009.1 Protein Homology CDS 9990 10409 . + 0 ID=cds-PDP77667.1;Parent=gene-CLI76_02860;Dbxref=NCBI_GP:PDP77667.1;Name=PDP77667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584701.1;locus_tag=CLI76_02860;product=DUF3127 domain-containing protein;protein_id=PDP77667.1;transl_table=11 NSLT01000009.1 Genbank gene 10409 10882 . + . ID=gene-CLI76_02865;Name=CLI76_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02865 NSLT01000009.1 Protein Homology CDS 10409 10882 . + 0 ID=cds-PDP77668.1;Parent=gene-CLI76_02865;Dbxref=NCBI_GP:PDP77668.1;Name=PDP77668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584700.1;locus_tag=CLI76_02865;product=ribosomal RNA large subunit methyltransferase H;protein_id=PDP77668.1;transl_table=11 NSLT01000009.1 Genbank gene 10944 12002 . + . ID=gene-CLI76_02870;Name=CLI76_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02870 NSLT01000009.1 Protein Homology CDS 10944 12002 . + 0 ID=cds-PDP77669.1;Parent=gene-CLI76_02870;Dbxref=NCBI_GP:PDP77669.1;Name=PDP77669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816071.1;locus_tag=CLI76_02870;product=peptide-methionine (R)-S-oxide reductase;protein_id=PDP77669.1;transl_table=11 NSLT01000009.1 Genbank gene 12059 13243 . + . ID=gene-CLI76_02875;Name=CLI76_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02875 NSLT01000009.1 Protein Homology CDS 12059 13243 . + 0 ID=cds-PDP77670.1;Parent=gene-CLI76_02875;Dbxref=NCBI_GP:PDP77670.1;Name=PDP77670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584698.1;locus_tag=CLI76_02875;product=hypothetical protein;protein_id=PDP77670.1;transl_table=11 NSLT01000009.1 Genbank gene 13650 14558 . + . ID=gene-CLI76_02880;Name=CLI76_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02880 NSLT01000009.1 Protein Homology CDS 13650 14558 . + 0 ID=cds-PDP77671.1;Parent=gene-CLI76_02880;Dbxref=NCBI_GP:PDP77671.1;Name=PDP77671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584697.1;locus_tag=CLI76_02880;product=cation transporter;protein_id=PDP77671.1;transl_table=11 NSLT01000009.1 Genbank gene 14601 14954 . + . ID=gene-CLI76_02885;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CLI76_02885 NSLT01000009.1 Protein Homology CDS 14601 14954 . + 0 ID=cds-PDP77672.1;Parent=gene-CLI76_02885;Dbxref=NCBI_GP:PDP77672.1;Name=PDP77672.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965795.1;locus_tag=CLI76_02885;product=dihydroneopterin aldolase;protein_id=PDP77672.1;transl_table=11 NSLT01000009.1 Genbank gene 15024 16283 . - . ID=gene-CLI76_02890;Name=CLI76_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02890 NSLT01000009.1 Protein Homology CDS 15024 16283 . - 0 ID=cds-PDP77673.1;Parent=gene-CLI76_02890;Dbxref=NCBI_GP:PDP77673.1;Name=PDP77673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873744.1;locus_tag=CLI76_02890;product=DUF5103 domain-containing protein;protein_id=PDP77673.1;transl_table=11 NSLT01000009.1 Genbank gene 16413 16619 . + . ID=gene-CLI76_02895;Name=CLI76_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02895 NSLT01000009.1 Protein Homology CDS 16413 16619 . + 0 ID=cds-PDP77674.1;Parent=gene-CLI76_02895;Dbxref=NCBI_GP:PDP77674.1;Name=PDP77674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816082.1;locus_tag=CLI76_02895;product=hypothetical protein;protein_id=PDP77674.1;transl_table=11 NSLT01000009.1 Genbank gene 17037 21584 . - . ID=gene-CLI76_02900;Name=CLI76_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02900 NSLT01000009.1 Protein Homology CDS 17037 21584 . - 0 ID=cds-PDP77675.1;Parent=gene-CLI76_02900;Dbxref=NCBI_GP:PDP77675.1;Name=PDP77675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457277.1;locus_tag=CLI76_02900;product=hypothetical protein;protein_id=PDP77675.1;transl_table=11 NSLT01000009.1 Genbank gene 22006 24333 . - . ID=gene-CLI76_02905;Name=CLI76_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02905 NSLT01000009.1 Protein Homology CDS 22006 24333 . - 0 ID=cds-PDP77676.1;Parent=gene-CLI76_02905;Dbxref=NCBI_GP:PDP77676.1;Name=PDP77676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965799.1;locus_tag=CLI76_02905;product=hypothetical protein;protein_id=PDP77676.1;transl_table=11 NSLT01000009.1 Genbank gene 24341 29131 . - . ID=gene-CLI76_02910;Name=CLI76_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02910 NSLT01000009.1 Protein Homology CDS 24341 29131 . - 0 ID=cds-PDP77677.1;Parent=gene-CLI76_02910;Dbxref=NCBI_GP:PDP77677.1;Name=PDP77677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873764.1;locus_tag=CLI76_02910;product=hypothetical protein;protein_id=PDP77677.1;transl_table=11 NSLT01000009.1 Genbank gene 29237 30178 . - . ID=gene-CLI76_02915;Name=CLI76_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02915 NSLT01000009.1 Protein Homology CDS 29237 30178 . - 0 ID=cds-PDP77678.1;Parent=gene-CLI76_02915;Dbxref=NCBI_GP:PDP77678.1;Name=PDP77678.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873771.1;locus_tag=CLI76_02915;product=ribose-phosphate pyrophosphokinase;protein_id=PDP77678.1;transl_table=11 NSLT01000009.1 Genbank gene 30365 31648 . - . ID=gene-CLI76_02920;Name=CLI76_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02920 NSLT01000009.1 Protein Homology CDS 30365 31648 . - 0 ID=cds-PDP77679.1;Parent=gene-CLI76_02920;Dbxref=NCBI_GP:PDP77679.1;Name=PDP77679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457281.1;locus_tag=CLI76_02920;product=ATP-dependent helicase;protein_id=PDP77679.1;transl_table=11 NSLT01000009.1 Genbank gene 31729 31923 . - . ID=gene-CLI76_02925;Name=CLI76_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02925 NSLT01000009.1 Protein Homology CDS 31729 31923 . - 0 ID=cds-PDP77680.1;Parent=gene-CLI76_02925;Dbxref=NCBI_GP:PDP77680.1;Name=PDP77680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816102.1;locus_tag=CLI76_02925;product=hypothetical protein;protein_id=PDP77680.1;transl_table=11 NSLT01000009.1 Genbank gene 32242 33894 . - . ID=gene-CLI76_02930;Name=CLI76_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02930 NSLT01000009.1 Protein Homology CDS 32242 33894 . - 0 ID=cds-PDP77681.1;Parent=gene-CLI76_02930;Dbxref=NCBI_GP:PDP77681.1;Name=PDP77681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965803.1;locus_tag=CLI76_02930;product=T9SS C-terminal target domain-containing protein;protein_id=PDP77681.1;transl_table=11 NSLT01000009.1 Genbank gene 33993 34967 . - . ID=gene-CLI76_02935;Name=CLI76_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02935 NSLT01000009.1 Protein Homology CDS 33993 34967 . - 0 ID=cds-PDP77682.1;Parent=gene-CLI76_02935;Dbxref=NCBI_GP:PDP77682.1;Name=PDP77682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457282.1;locus_tag=CLI76_02935;product=hypothetical protein;protein_id=PDP77682.1;transl_table=11 NSLT01000009.1 Genbank gene 35139 36761 . - . ID=gene-CLI76_02940;Name=CLI76_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02940 NSLT01000009.1 Protein Homology CDS 35139 36761 . - 0 ID=cds-PDP77683.1;Parent=gene-CLI76_02940;Dbxref=NCBI_GP:PDP77683.1;Name=PDP77683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816061.1;locus_tag=CLI76_02940;product=T9SS C-terminal target domain-containing protein;protein_id=PDP77683.1;transl_table=11 NSLT01000009.1 Genbank gene 37407 37483 . + . ID=gene-CLI76_02945;Name=CLI76_02945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CLI76_02945 NSLT01000009.1 tRNAscan-SE tRNA 37407 37483 . + . ID=rna-CLI76_02945;Parent=gene-CLI76_02945;anticodon=(pos:37441..37443);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02945;product=tRNA-Met NSLT01000009.1 tRNAscan-SE exon 37407 37483 . + . ID=exon-CLI76_02945-1;Parent=rna-CLI76_02945;anticodon=(pos:37441..37443);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CLI76_02945;product=tRNA-Met NSLT01000009.1 Genbank gene 37703 38263 . + . ID=gene-CLI76_02950;Name=CLI76_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02950 NSLT01000009.1 Protein Homology CDS 37703 38263 . + 0 ID=cds-PDP77684.1;Parent=gene-CLI76_02950;Dbxref=NCBI_GP:PDP77684.1;Name=PDP77684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457284.1;locus_tag=CLI76_02950;product=hypothetical protein;protein_id=PDP77684.1;transl_table=11 NSLT01000009.1 Genbank gene 38458 39141 . + . ID=gene-CLI76_02955;Name=CLI76_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02955 NSLT01000009.1 Protein Homology CDS 38458 39141 . + 0 ID=cds-PDP77685.1;Parent=gene-CLI76_02955;Dbxref=NCBI_GP:PDP77685.1;Name=PDP77685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816056.1;locus_tag=CLI76_02955;product=hypothetical protein;protein_id=PDP77685.1;transl_table=11 NSLT01000009.1 Genbank gene 39260 40372 . - . ID=gene-CLI76_02960;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CLI76_02960 NSLT01000009.1 Protein Homology CDS 39260 40372 . - 0 ID=cds-PDP77686.1;Parent=gene-CLI76_02960;Dbxref=NCBI_GP:PDP77686.1;Name=PDP77686.1;gbkey=CDS;gene=thiH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965944.1;locus_tag=CLI76_02960;product=2-iminoacetate synthase ThiH;protein_id=PDP77686.1;transl_table=11 NSLT01000009.1 Genbank gene 40385 41164 . - . ID=gene-CLI76_02965;Name=CLI76_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02965 NSLT01000009.1 Protein Homology CDS 40385 41164 . - 0 ID=cds-PDP77687.1;Parent=gene-CLI76_02965;Dbxref=NCBI_GP:PDP77687.1;Name=PDP77687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816054.1;locus_tag=CLI76_02965;product=thiazole synthase;protein_id=PDP77687.1;transl_table=11 NSLT01000009.1 Genbank gene 41223 43166 . - . ID=gene-CLI76_02970;Name=CLI76_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02970 NSLT01000009.1 Protein Homology CDS 41223 43166 . - 0 ID=cds-PDP77688.1;Parent=gene-CLI76_02970;Dbxref=NCBI_GP:PDP77688.1;Name=PDP77688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873748.1;locus_tag=CLI76_02970;product=thiamine phosphate synthase;protein_id=PDP77688.1;transl_table=11 NSLT01000009.1 Genbank gene 43163 44926 . - . ID=gene-CLI76_02975;Name=CLI76_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02975 NSLT01000009.1 Protein Homology CDS 43163 44926 . - 0 ID=cds-PDP77689.1;Parent=gene-CLI76_02975;Dbxref=NCBI_GP:PDP77689.1;Name=PDP77689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012457290.1;locus_tag=CLI76_02975;product=phosphomethylpyrimidine synthase ThiC;protein_id=PDP77689.1;transl_table=11 NSLT01000009.1 Genbank gene 44996 45196 . - . ID=gene-CLI76_02980;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CLI76_02980 NSLT01000009.1 Protein Homology CDS 44996 45196 . - 0 ID=cds-PDP77690.1;Parent=gene-CLI76_02980;Dbxref=NCBI_GP:PDP77690.1;Name=PDP77690.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584666.1;locus_tag=CLI76_02980;product=thiamine biosynthesis protein ThiS;protein_id=PDP77690.1;transl_table=11 NSLT01000009.1 cmsearch riboswitch 45288 45398 . - . ID=id-NSLT01000009.1:45288..45398;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NSLT01000009.1 Genbank gene 45613 46335 . + . ID=gene-CLI76_02985;Name=CLI76_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02985 NSLT01000009.1 Protein Homology CDS 45613 46335 . + 0 ID=cds-PDP77691.1;Parent=gene-CLI76_02985;Dbxref=NCBI_GP:PDP77691.1;Name=PDP77691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816051.1;locus_tag=CLI76_02985;product=hypothetical protein;protein_id=PDP77691.1;transl_table=11 NSLT01000009.1 Genbank gene 46631 47587 . + . ID=gene-CLI76_02990;Name=CLI76_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_02990 NSLT01000009.1 Protein Homology CDS 46631 47587 . + 0 ID=cds-PDP77692.1;Parent=gene-CLI76_02990;Dbxref=NCBI_GP:PDP77692.1;Name=PDP77692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965949.1;locus_tag=CLI76_02990;product=hypothetical protein;protein_id=PDP77692.1;transl_table=11 NSLT01000009.1 Genbank pseudogene 47694 47905 . - . ID=gene-CLI76_02995;Name=CLI76_02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_02995;pseudo=true NSLT01000009.1 Protein Homology CDS 47694 47905 . - 0 ID=cds-CLI76_02995;Parent=gene-CLI76_02995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873769.1;locus_tag=CLI76_02995;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000009.1 Genbank gene 47941 48369 . + . ID=gene-CLI76_03000;Name=CLI76_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03000 NSLT01000009.1 Protein Homology CDS 47941 48369 . + 0 ID=cds-PDP77693.1;Parent=gene-CLI76_03000;Dbxref=NCBI_GP:PDP77693.1;Name=PDP77693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816245.1;locus_tag=CLI76_03000;product=hypothetical protein;protein_id=PDP77693.1;transl_table=11 NSLT01000009.1 Genbank gene 48376 48543 . + . ID=gene-CLI76_03005;Name=CLI76_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03005 NSLT01000009.1 Protein Homology CDS 48376 48543 . + 0 ID=cds-PDP77694.1;Parent=gene-CLI76_03005;Dbxref=NCBI_GP:PDP77694.1;Name=PDP77694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956503.1;locus_tag=CLI76_03005;product=hypothetical protein;protein_id=PDP77694.1;transl_table=11 NSLT01000009.1 Genbank gene 48740 49318 . - . ID=gene-CLI76_03010;Name=CLI76_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03010 NSLT01000009.1 Protein Homology CDS 48740 49318 . - 0 ID=cds-PDP77695.1;Parent=gene-CLI76_03010;Dbxref=NCBI_GP:PDP77695.1;Name=PDP77695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005642538.1;locus_tag=CLI76_03010;product=30S ribosomal protein S16;protein_id=PDP77695.1;transl_table=11 NSLT01000009.1 Genbank gene 49471 49877 . - . ID=gene-CLI76_03015;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CLI76_03015 NSLT01000009.1 cmsearch tmRNA 49471 49877 . - . ID=rna-CLI76_03015;Parent=gene-CLI76_03015;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_03015;product=transfer-messenger RNA NSLT01000009.1 cmsearch exon 49471 49877 . - . ID=exon-CLI76_03015-1;Parent=rna-CLI76_03015;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CLI76_03015;product=transfer-messenger RNA NSLT01000009.1 Genbank gene 50103 51074 . + . ID=gene-CLI76_03020;Name=CLI76_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03020 NSLT01000009.1 Protein Homology CDS 50103 51074 . + 0 ID=cds-PDP77705.1;Parent=gene-CLI76_03020;Dbxref=NCBI_GP:PDP77705.1;Name=PDP77705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873711.1;locus_tag=CLI76_03020;product=oxidoreductase;protein_id=PDP77705.1;transl_table=11 NSLT01000009.1 Genbank gene 51189 51998 . - . ID=gene-CLI76_03025;Name=CLI76_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03025 NSLT01000009.1 Protein Homology CDS 51189 51998 . - 0 ID=cds-PDP77696.1;Parent=gene-CLI76_03025;Dbxref=NCBI_GP:PDP77696.1;Name=PDP77696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873709.1;locus_tag=CLI76_03025;product=MBL fold metallo-hydrolase;protein_id=PDP77696.1;transl_table=11 NSLT01000009.1 Genbank gene 52051 53130 . - . ID=gene-CLI76_03030;Name=CLI76_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03030 NSLT01000009.1 Protein Homology CDS 52051 53130 . - 0 ID=cds-PDP77697.1;Parent=gene-CLI76_03030;Dbxref=NCBI_GP:PDP77697.1;Name=PDP77697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956504.1;locus_tag=CLI76_03030;product=asparaginase;protein_id=PDP77697.1;transl_table=11 NSLT01000009.1 Genbank pseudogene 53340 53453 . - . ID=gene-CLI76_03035;Name=CLI76_03035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03035;pseudo=true NSLT01000009.1 Protein Homology CDS 53340 53453 . - 0 ID=cds-CLI76_03035;Parent=gene-CLI76_03035;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584862.1;locus_tag=CLI76_03035;product=ISAs1 family transposase;pseudo=true;transl_table=11 NSLT01000009.1 Genbank gene 53447 53719 . + . ID=gene-CLI76_03040;Name=CLI76_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03040 NSLT01000009.1 Protein Homology CDS 53447 53719 . + 0 ID=cds-PDP77698.1;Parent=gene-CLI76_03040;Dbxref=NCBI_GP:PDP77698.1;Name=PDP77698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010956505.1;locus_tag=CLI76_03040;product=hypothetical protein;protein_id=PDP77698.1;transl_table=11 NSLT01000009.1 Genbank gene 53730 54740 . + . ID=gene-CLI76_03045;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CLI76_03045 NSLT01000009.1 Protein Homology CDS 53730 54740 . + 0 ID=cds-PDP77699.1;Parent=gene-CLI76_03045;Dbxref=NCBI_GP:PDP77699.1;Name=PDP77699.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584653.1;locus_tag=CLI76_03045;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=PDP77699.1;transl_table=11 NSLT01000009.1 Genbank gene 54881 55828 . - . ID=gene-CLI76_03050;Name=CLI76_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03050 NSLT01000009.1 Protein Homology CDS 54881 55828 . - 0 ID=cds-PDP77700.1;Parent=gene-CLI76_03050;Dbxref=NCBI_GP:PDP77700.1;Name=PDP77700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816044.1;locus_tag=CLI76_03050;product=AraC family transcriptional regulator;protein_id=PDP77700.1;transl_table=11 NSLT01000009.1 Genbank gene 55942 56616 . - . ID=gene-CLI76_03055;Name=CLI76_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03055 NSLT01000009.1 Protein Homology CDS 55942 56616 . - 0 ID=cds-PDP77701.1;Parent=gene-CLI76_03055;Dbxref=NCBI_GP:PDP77701.1;Name=PDP77701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018965286.1;locus_tag=CLI76_03055;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=PDP77701.1;transl_table=11 NSLT01000009.1 Genbank gene 56613 57056 . - . ID=gene-CLI76_03060;Name=CLI76_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03060 NSLT01000009.1 Protein Homology CDS 56613 57056 . - 0 ID=cds-PDP77702.1;Parent=gene-CLI76_03060;Dbxref=NCBI_GP:PDP77702.1;Name=PDP77702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816042.1;locus_tag=CLI76_03060;product=DUF4494 domain-containing protein;protein_id=PDP77702.1;transl_table=11 NSLT01000009.1 Genbank pseudogene 57078 57263 . + . ID=gene-CLI76_03065;Name=CLI76_03065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CLI76_03065;pseudo=true NSLT01000009.1 Protein Homology CDS 57078 57263 . + 0 ID=cds-CLI76_03065;Parent=gene-CLI76_03065;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004584648.1;locus_tag=CLI76_03065;product=hypothetical protein;pseudo=true;transl_table=11 NSLT01000009.1 Genbank gene 57367 58156 . - . ID=gene-CLI76_03070;Name=CLI76_03070;end_range=58156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CLI76_03070;partial=true NSLT01000009.1 Protein Homology CDS 57367 58156 . - 1 ID=cds-PDP77703.1;Parent=gene-CLI76_03070;Dbxref=NCBI_GP:PDP77703.1;Name=PDP77703.1;end_range=58156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611804.1;locus_tag=CLI76_03070;partial=true;product=IS3 family transposase;protein_id=PDP77703.1;transl_table=11 ###