##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM288461v1 #!genome-build-accession NCBI_Assembly:GCA_002884615.1 #!annotation-date 01/05/2018 12:27:46 #!annotation-source NCBI ##sequence-region PNGG01000001.1 1 743230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000001.1 Genbank region 1 743230 . + . ID=PNGG01000001.1:1..743230;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000001.1 Genbank gene 400 1098 . - . ID=gene-CJ235_00005;Name=CJ235_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00005 PNGG01000001.1 GeneMarkS+ CDS 400 1098 . - 0 ID=cds-PMC20086.1;Parent=gene-CJ235_00005;Dbxref=NCBI_GP:PMC20086.1;Name=PMC20086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00005;product=hypothetical protein;protein_id=PMC20086.1;transl_table=11 PNGG01000001.1 Genbank gene 1110 1670 . - . ID=gene-CJ235_00010;Name=CJ235_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00010 PNGG01000001.1 Protein Homology CDS 1110 1670 . - 0 ID=cds-PMC20087.1;Parent=gene-CJ235_00010;Dbxref=NCBI_GP:PMC20087.1;Name=PMC20087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04607.15;locus_tag=CJ235_00010;product=hypothetical protein;protein_id=PMC20087.1;transl_table=11 PNGG01000001.1 Genbank gene 1989 3356 . - . ID=gene-CJ235_00015;Name=CJ235_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00015 PNGG01000001.1 Protein Homology CDS 1989 3356 . - 0 ID=cds-PMC20088.1;Parent=gene-CJ235_00015;Dbxref=NCBI_GP:PMC20088.1;Name=PMC20088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CJ235_00015;product=signal recognition particle protein;protein_id=PMC20088.1;transl_table=11 PNGG01000001.1 Genbank gene 3383 3715 . - . ID=gene-CJ235_00020;Name=CJ235_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00020 PNGG01000001.1 Protein Homology CDS 3383 3715 . - 0 ID=cds-PMC20089.1;Parent=gene-CJ235_00020;Dbxref=NCBI_GP:PMC20089.1;Name=PMC20089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499743.1;locus_tag=CJ235_00020;product=putative DNA-binding protein;protein_id=PMC20089.1;transl_table=11 PNGG01000001.1 Genbank gene 3708 4970 . - . ID=gene-CJ235_00025;Name=CJ235_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00025 PNGG01000001.1 Protein Homology CDS 3708 4970 . - 0 ID=cds-PMC20090.1;Parent=gene-CJ235_00025;Dbxref=NCBI_GP:PMC20090.1;Name=PMC20090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478299.1;locus_tag=CJ235_00025;product=signal recognition particle-docking protein FtsY;protein_id=PMC20090.1;transl_table=11 PNGG01000001.1 Genbank gene 4967 8536 . - . ID=gene-CJ235_00030;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CJ235_00030 PNGG01000001.1 Protein Homology CDS 4967 8536 . - 0 ID=cds-PMC20091.1;Parent=gene-CJ235_00030;Dbxref=NCBI_GP:PMC20091.1;Name=PMC20091.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472117.1;locus_tag=CJ235_00030;product=chromosome segregation protein SMC;protein_id=PMC20091.1;transl_table=11 PNGG01000001.1 Genbank gene 8570 9301 . - . ID=gene-CJ235_00035;Name=CJ235_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00035 PNGG01000001.1 Protein Homology CDS 8570 9301 . - 0 ID=cds-PMC20092.1;Parent=gene-CJ235_00035;Dbxref=NCBI_GP:PMC20092.1;Name=PMC20092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472119.1;locus_tag=CJ235_00035;product=ribonuclease III;protein_id=PMC20092.1;transl_table=11 PNGG01000001.1 Genbank gene 9474 9707 . - . ID=gene-CJ235_00040;Name=CJ235_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00040 PNGG01000001.1 Protein Homology CDS 9474 9707 . - 0 ID=cds-PMC20093.1;Parent=gene-CJ235_00040;Dbxref=NCBI_GP:PMC20093.1;Name=PMC20093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CJ235_00040;product=acyl carrier protein;protein_id=PMC20093.1;transl_table=11 PNGG01000001.1 Genbank gene 9894 10628 . - . ID=gene-CJ235_00045;Name=CJ235_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00045 PNGG01000001.1 Protein Homology CDS 9894 10628 . - 0 ID=cds-PMC20094.1;Parent=gene-CJ235_00045;Dbxref=NCBI_GP:PMC20094.1;Name=PMC20094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499737.1;locus_tag=CJ235_00045;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=PMC20094.1;transl_table=11 PNGG01000001.1 Genbank gene 10621 11547 . - . ID=gene-CJ235_00050;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CJ235_00050 PNGG01000001.1 Protein Homology CDS 10621 11547 . - 0 ID=cds-PMC20095.1;Parent=gene-CJ235_00050;Dbxref=NCBI_GP:PMC20095.1;Name=PMC20095.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483494.1;locus_tag=CJ235_00050;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=PMC20095.1;transl_table=11 PNGG01000001.1 Genbank gene 11550 12527 . - . ID=gene-CJ235_00055;Name=CJ235_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00055 PNGG01000001.1 Protein Homology CDS 11550 12527 . - 0 ID=cds-PMC20096.1;Parent=gene-CJ235_00055;Dbxref=NCBI_GP:PMC20096.1;Name=PMC20096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476645.1;locus_tag=CJ235_00055;product=phosphate acyltransferase PlsX;protein_id=PMC20096.1;transl_table=11 PNGG01000001.1 Genbank gene 12520 13092 . - . ID=gene-CJ235_00060;Name=CJ235_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00060 PNGG01000001.1 Protein Homology CDS 12520 13092 . - 0 ID=cds-PMC20097.1;Parent=gene-CJ235_00060;Dbxref=NCBI_GP:PMC20097.1;Name=PMC20097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472118.1;locus_tag=CJ235_00060;product=transcription factor FapR;protein_id=PMC20097.1;transl_table=11 PNGG01000001.1 Genbank gene 13255 15300 . - . ID=gene-CJ235_00065;Name=CJ235_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00065 PNGG01000001.1 Protein Homology CDS 13255 15300 . - 0 ID=cds-PMC20098.1;Parent=gene-CJ235_00065;Dbxref=NCBI_GP:PMC20098.1;Name=PMC20098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472112.1;locus_tag=CJ235_00065;product=DNA helicase RecG;protein_id=PMC20098.1;transl_table=11 PNGG01000001.1 Genbank gene 15302 16177 . - . ID=gene-CJ235_00070;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CJ235_00070 PNGG01000001.1 Protein Homology CDS 15302 16177 . - 0 ID=cds-PMC20099.1;Parent=gene-CJ235_00070;Dbxref=NCBI_GP:PMC20099.1;Name=PMC20099.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507890.1;locus_tag=CJ235_00070;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=PMC20099.1;transl_table=11 PNGG01000001.1 Genbank gene 16193 16858 . - . ID=gene-CJ235_00075;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CJ235_00075 PNGG01000001.1 Protein Homology CDS 16193 16858 . - 0 ID=cds-PMC20100.1;Parent=gene-CJ235_00075;Dbxref=NCBI_GP:PMC20100.1;Name=PMC20100.1;gbkey=CDS;gene=sdaAB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614130.1;locus_tag=CJ235_00075;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit beta;protein_id=PMC20100.1;transl_table=11 PNGG01000001.1 Genbank gene 17304 18968 . - . ID=gene-CJ235_00080;Name=CJ235_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00080 PNGG01000001.1 Protein Homology CDS 17304 18968 . - 0 ID=cds-PMC20101.1;Parent=gene-CJ235_00080;Dbxref=NCBI_GP:PMC20101.1;Name=PMC20101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472127.1;locus_tag=CJ235_00080;product=DAK2 domain-containing protein;protein_id=PMC20101.1;transl_table=11 PNGG01000001.1 Genbank gene 19353 19541 . + . ID=gene-CJ235_00085;Name=CJ235_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00085 PNGG01000001.1 Protein Homology CDS 19353 19541 . + 0 ID=cds-PMC20102.1;Parent=gene-CJ235_00085;Dbxref=NCBI_GP:PMC20102.1;Name=PMC20102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CJ235_00085;product=50S ribosomal protein L28;protein_id=PMC20102.1;transl_table=11 PNGG01000001.1 Genbank gene 19702 20343 . - . ID=gene-CJ235_00090;Name=CJ235_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00090 PNGG01000001.1 Protein Homology CDS 19702 20343 . - 0 ID=cds-PMC20103.1;Parent=gene-CJ235_00090;Dbxref=NCBI_GP:PMC20103.1;Name=PMC20103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472114.1;locus_tag=CJ235_00090;product=thiamine diphosphokinase;protein_id=PMC20103.1;transl_table=11 PNGG01000001.1 Genbank gene 20348 20992 . - . ID=gene-CJ235_00095;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CJ235_00095 PNGG01000001.1 Protein Homology CDS 20348 20992 . - 0 ID=cds-PMC20104.1;Parent=gene-CJ235_00095;Dbxref=NCBI_GP:PMC20104.1;Name=PMC20104.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303294.1;locus_tag=CJ235_00095;product=ribulose-phosphate 3-epimerase;protein_id=PMC20104.1;transl_table=11 PNGG01000001.1 Genbank gene 20993 21868 . - . ID=gene-CJ235_00100;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CJ235_00100 PNGG01000001.1 Protein Homology CDS 20993 21868 . - 0 ID=cds-PMC20105.1;Parent=gene-CJ235_00100;Dbxref=NCBI_GP:PMC20105.1;Name=PMC20105.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472110.1;locus_tag=CJ235_00100;product=ribosome small subunit-dependent GTPase A;protein_id=PMC20105.1;transl_table=11 PNGG01000001.1 Genbank gene 22152 24272 . - . ID=gene-CJ235_00105;Name=CJ235_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00105 PNGG01000001.1 Protein Homology CDS 22152 24272 . - 0 ID=cds-PMC20106.1;Parent=gene-CJ235_00105;Dbxref=NCBI_GP:PMC20106.1;Name=PMC20106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472107.1;locus_tag=CJ235_00105;product=serine/threonine-protein kinase;protein_id=PMC20106.1;transl_table=11 PNGG01000001.1 Genbank gene 24269 25012 . - . ID=gene-CJ235_00110;Name=CJ235_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00110 PNGG01000001.1 Protein Homology CDS 24269 25012 . - 0 ID=cds-PMC20107.1;Parent=gene-CJ235_00110;Dbxref=NCBI_GP:PMC20107.1;Name=PMC20107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472105.1;locus_tag=CJ235_00110;product=serine/threonine-protein phosphatase;protein_id=PMC20107.1;transl_table=11 PNGG01000001.1 Genbank gene 25018 26112 . - . ID=gene-CJ235_00115;Name=CJ235_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00115 PNGG01000001.1 Protein Homology CDS 25018 26112 . - 0 ID=cds-PMC20108.1;Parent=gene-CJ235_00115;Dbxref=NCBI_GP:PMC20108.1;Name=PMC20108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CJ235_00115;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=PMC20108.1;transl_table=11 PNGG01000001.1 Genbank gene 26117 27430 . - . ID=gene-CJ235_00120;Name=CJ235_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00120 PNGG01000001.1 Protein Homology CDS 26117 27430 . - 0 ID=cds-PMC20109.1;Parent=gene-CJ235_00120;Dbxref=NCBI_GP:PMC20109.1;Name=PMC20109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472123.1;locus_tag=CJ235_00120;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=PMC20109.1;transl_table=11 PNGG01000001.1 Genbank gene 27427 28359 . - . ID=gene-CJ235_00125;Name=CJ235_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00125 PNGG01000001.1 Protein Homology CDS 27427 28359 . - 0 ID=cds-PMC20110.1;Parent=gene-CJ235_00125;Dbxref=NCBI_GP:PMC20110.1;Name=PMC20110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435167.1;locus_tag=CJ235_00125;product=methionyl-tRNA formyltransferase;protein_id=PMC20110.1;transl_table=11 PNGG01000001.1 Genbank gene 28352 28840 . - . ID=gene-CJ235_00130;Name=CJ235_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00130 PNGG01000001.1 Protein Homology CDS 28352 28840 . - 0 ID=cds-PMC20111.1;Parent=gene-CJ235_00130;Dbxref=NCBI_GP:PMC20111.1;Name=PMC20111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303300.1;locus_tag=CJ235_00130;product=peptide deformylase;protein_id=PMC20111.1;transl_table=11 PNGG01000001.1 Genbank gene 29249 30265 . + . ID=gene-CJ235_00135;Name=CJ235_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00135 PNGG01000001.1 Protein Homology CDS 29249 30265 . + 0 ID=cds-PMC20112.1;Parent=gene-CJ235_00135;Dbxref=NCBI_GP:PMC20112.1;Name=PMC20112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472843.1;locus_tag=CJ235_00135;product=hypothetical protein;protein_id=PMC20112.1;transl_table=11 PNGG01000001.1 Genbank gene 30350 32758 . - . ID=gene-CJ235_00140;Name=CJ235_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00140 PNGG01000001.1 Protein Homology CDS 30350 32758 . - 0 ID=cds-PMC20113.1;Parent=gene-CJ235_00140;Dbxref=NCBI_GP:PMC20113.1;Name=PMC20113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467768.1;locus_tag=CJ235_00140;product=primosomal protein N';protein_id=PMC20113.1;transl_table=11 PNGG01000001.1 Genbank gene 32759 33982 . - . ID=gene-CJ235_00145;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CJ235_00145 PNGG01000001.1 Protein Homology CDS 32759 33982 . - 0 ID=cds-PMC20114.1;Parent=gene-CJ235_00145;Dbxref=NCBI_GP:PMC20114.1;Name=PMC20114.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275988.1;locus_tag=CJ235_00145;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=PMC20114.1;transl_table=11 PNGG01000001.1 Genbank gene 34470 34682 . - . ID=gene-CJ235_00150;Name=CJ235_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00150 PNGG01000001.1 Protein Homology CDS 34470 34682 . - 0 ID=cds-PMC20115.1;Parent=gene-CJ235_00150;Dbxref=NCBI_GP:PMC20115.1;Name=PMC20115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510937.1;locus_tag=CJ235_00150;product=DNA-directed RNA polymerase subunit omega;protein_id=PMC20115.1;transl_table=11 PNGG01000001.1 Genbank gene 34682 35305 . - . ID=gene-CJ235_00155;Name=CJ235_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00155 PNGG01000001.1 Protein Homology CDS 34682 35305 . - 0 ID=cds-PMC20116.1;Parent=gene-CJ235_00155;Dbxref=NCBI_GP:PMC20116.1;Name=PMC20116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459337.1;locus_tag=CJ235_00155;product=guanylate kinase;protein_id=PMC20116.1;transl_table=11 PNGG01000001.1 Genbank gene 35462 37165 . + . ID=gene-CJ235_00160;Name=CJ235_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00160 PNGG01000001.1 Protein Homology CDS 35462 37165 . + 0 ID=cds-PMC20117.1;Parent=gene-CJ235_00160;Dbxref=NCBI_GP:PMC20117.1;Name=PMC20117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472856.1;locus_tag=CJ235_00160;product=DUF814 domain-containing protein;protein_id=PMC20117.1;transl_table=11 PNGG01000001.1 Genbank gene 37337 37744 . - . ID=gene-CJ235_00165;Name=CJ235_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00165 PNGG01000001.1 Protein Homology CDS 37337 37744 . - 0 ID=cds-PMC20118.1;Parent=gene-CJ235_00165;Dbxref=NCBI_GP:PMC20118.1;Name=PMC20118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381641.1;locus_tag=CJ235_00165;product=VOC family protein;protein_id=PMC20118.1;transl_table=11 PNGG01000001.1 Genbank gene 38103 38711 . - . ID=gene-CJ235_00170;Name=CJ235_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00170 PNGG01000001.1 Protein Homology CDS 38103 38711 . - 0 ID=cds-PMC20119.1;Parent=gene-CJ235_00170;Dbxref=NCBI_GP:PMC20119.1;Name=PMC20119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462174.1;locus_tag=CJ235_00170;product=orotate phosphoribosyltransferase;protein_id=PMC20119.1;transl_table=11 PNGG01000001.1 Genbank gene 38713 39405 . - . ID=gene-CJ235_00175;Name=CJ235_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00175 PNGG01000001.1 Protein Homology CDS 38713 39405 . - 0 ID=cds-PMC20120.1;Parent=gene-CJ235_00175;Dbxref=NCBI_GP:PMC20120.1;Name=PMC20120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493094.1;locus_tag=CJ235_00175;product=orotidine-5'-phosphate decarboxylase;protein_id=PMC20120.1;transl_table=11 PNGG01000001.1 Genbank gene 39620 42793 . - . ID=gene-CJ235_00180;Name=CJ235_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00180 PNGG01000001.1 Protein Homology CDS 39620 42793 . - 0 ID=cds-PMC20121.1;Parent=gene-CJ235_00180;Dbxref=NCBI_GP:PMC20121.1;Name=PMC20121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442460.1;locus_tag=CJ235_00180;product=carbamoyl-phosphate synthase large subunit;protein_id=PMC20121.1;transl_table=11 PNGG01000001.1 Genbank gene 42786 43886 . - . ID=gene-CJ235_00185;Name=CJ235_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00185 PNGG01000001.1 Protein Homology CDS 42786 43886 . - 0 ID=cds-PMC20122.1;Parent=gene-CJ235_00185;Dbxref=NCBI_GP:PMC20122.1;Name=PMC20122.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507917.1;locus_tag=CJ235_00185;product=carbamoyl-phosphate synthase small subunit;protein_id=PMC20122.1;transl_table=11 PNGG01000001.1 Genbank gene 43886 45160 . - . ID=gene-CJ235_00190;Name=CJ235_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00190 PNGG01000001.1 Protein Homology CDS 43886 45160 . - 0 ID=cds-PMC20123.1;Parent=gene-CJ235_00190;Dbxref=NCBI_GP:PMC20123.1;Name=PMC20123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493090.1;locus_tag=CJ235_00190;product=dihydroorotase;protein_id=PMC20123.1;transl_table=11 PNGG01000001.1 Genbank gene 45167 46060 . - . ID=gene-CJ235_00195;Name=CJ235_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00195 PNGG01000001.1 Protein Homology CDS 45167 46060 . - 0 ID=cds-PMC20124.1;Parent=gene-CJ235_00195;Dbxref=NCBI_GP:PMC20124.1;Name=PMC20124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472836.1;locus_tag=CJ235_00195;product=aspartate carbamoyltransferase catalytic subunit;protein_id=PMC20124.1;transl_table=11 PNGG01000001.1 Genbank gene 46085 47404 . - . ID=gene-CJ235_00200;Name=CJ235_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00200 PNGG01000001.1 Protein Homology CDS 46085 47404 . - 0 ID=cds-PMC20125.1;Parent=gene-CJ235_00200;Dbxref=NCBI_GP:PMC20125.1;Name=PMC20125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472881.1;locus_tag=CJ235_00200;product=uracil permease;protein_id=PMC20125.1;transl_table=11 PNGG01000001.1 Genbank gene 47597 48124 . - . ID=gene-CJ235_00205;Name=CJ235_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00205 PNGG01000001.1 Protein Homology CDS 47597 48124 . - 0 ID=cds-PMC20126.1;Parent=gene-CJ235_00205;Dbxref=NCBI_GP:PMC20126.1;Name=PMC20126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499704.1;locus_tag=CJ235_00205;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=PMC20126.1;transl_table=11 PNGG01000001.1 Genbank gene 48637 49554 . - . ID=gene-CJ235_00210;Name=CJ235_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00210 PNGG01000001.1 Protein Homology CDS 48637 49554 . - 0 ID=cds-PMC20127.1;Parent=gene-CJ235_00210;Dbxref=NCBI_GP:PMC20127.1;Name=PMC20127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764427.1;locus_tag=CJ235_00210;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=PMC20127.1;transl_table=11 PNGG01000001.1 Genbank gene 49566 50045 . - . ID=gene-CJ235_00215;Name=CJ235_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00215 PNGG01000001.1 Protein Homology CDS 49566 50045 . - 0 ID=cds-PMC20128.1;Parent=gene-CJ235_00215;Dbxref=NCBI_GP:PMC20128.1;Name=PMC20128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472865.1;locus_tag=CJ235_00215;product=lipoprotein signal peptidase;protein_id=PMC20128.1;transl_table=11 PNGG01000001.1 Genbank gene 50257 53010 . - . ID=gene-CJ235_00220;Name=CJ235_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00220 PNGG01000001.1 Protein Homology CDS 50257 53010 . - 0 ID=cds-PMC20129.1;Parent=gene-CJ235_00220;Dbxref=NCBI_GP:PMC20129.1;Name=PMC20129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764423.1;locus_tag=CJ235_00220;product=isoleucine--tRNA ligase;protein_id=PMC20129.1;transl_table=11 PNGG01000001.1 Genbank gene 53238 53867 . - . ID=gene-CJ235_00225;Name=CJ235_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00225 PNGG01000001.1 Protein Homology CDS 53238 53867 . - 0 ID=cds-PMC20130.1;Parent=gene-CJ235_00225;Dbxref=NCBI_GP:PMC20130.1;Name=PMC20130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435215.1;locus_tag=CJ235_00225;product=DivIVA domain-containing protein;protein_id=PMC20130.1;transl_table=11 PNGG01000001.1 Genbank gene 53904 54683 . - . ID=gene-CJ235_00230;Name=CJ235_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00230 PNGG01000001.1 Protein Homology CDS 53904 54683 . - 0 ID=cds-PMC20131.1;Parent=gene-CJ235_00230;Dbxref=NCBI_GP:PMC20131.1;Name=PMC20131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472871.1;locus_tag=CJ235_00230;product=RNA-binding protein;protein_id=PMC20131.1;transl_table=11 PNGG01000001.1 Genbank gene 54820 55107 . - . ID=gene-CJ235_00235;Name=CJ235_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00235 PNGG01000001.1 Protein Homology CDS 54820 55107 . - 0 ID=cds-PMC20132.1;Parent=gene-CJ235_00235;Dbxref=NCBI_GP:PMC20132.1;Name=PMC20132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510916.1;locus_tag=CJ235_00235;product=YggT family protein;protein_id=PMC20132.1;transl_table=11 PNGG01000001.1 Genbank gene 55118 55690 . - . ID=gene-CJ235_00240;Name=CJ235_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00240 PNGG01000001.1 Protein Homology CDS 55118 55690 . - 0 ID=cds-PMC20133.1;Parent=gene-CJ235_00240;Dbxref=NCBI_GP:PMC20133.1;Name=PMC20133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483538.1;locus_tag=CJ235_00240;product=translation initiation factor IF-2;protein_id=PMC20133.1;transl_table=11 PNGG01000001.1 Genbank gene 55696 56370 . - . ID=gene-CJ235_00245;Name=CJ235_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00245 PNGG01000001.1 Protein Homology CDS 55696 56370 . - 0 ID=cds-PMC20134.1;Parent=gene-CJ235_00245;Dbxref=NCBI_GP:PMC20134.1;Name=PMC20134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442427.1;locus_tag=CJ235_00245;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=PMC20134.1;transl_table=11 PNGG01000001.1 Genbank gene 56372 57184 . - . ID=gene-CJ235_00250;Name=CJ235_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00250 PNGG01000001.1 Protein Homology CDS 56372 57184 . - 0 ID=cds-PMC20135.1;Parent=gene-CJ235_00250;Dbxref=NCBI_GP:PMC20135.1;Name=PMC20135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472841.1;locus_tag=CJ235_00250;product=peptidoglycan editing factor PgeF;protein_id=PMC20135.1;transl_table=11 PNGG01000001.1 Genbank gene 57430 58602 . - . ID=gene-CJ235_00255;Name=CJ235_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00255 PNGG01000001.1 Protein Homology CDS 57430 58602 . - 0 ID=cds-PMC20136.1;Parent=gene-CJ235_00255;Dbxref=NCBI_GP:PMC20136.1;Name=PMC20136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764416.1;locus_tag=CJ235_00255;product=cell division protein FtsZ;protein_id=PMC20136.1;transl_table=11 PNGG01000001.1 Genbank gene 58631 60028 . - . ID=gene-CJ235_00260;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CJ235_00260 PNGG01000001.1 Protein Homology CDS 58631 60028 . - 0 ID=cds-PMC20137.1;Parent=gene-CJ235_00260;Dbxref=NCBI_GP:PMC20137.1;Name=PMC20137.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764415.1;locus_tag=CJ235_00260;product=cell division protein FtsA;protein_id=PMC20137.1;transl_table=11 PNGG01000001.1 Genbank gene 60133 61035 . - . ID=gene-CJ235_00265;Name=CJ235_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00265 PNGG01000001.1 Protein Homology CDS 60133 61035 . - 0 ID=cds-PMC20138.1;Parent=gene-CJ235_00265;Dbxref=NCBI_GP:PMC20138.1;Name=PMC20138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472835.1;locus_tag=CJ235_00265;product=cell division protein DivIB;protein_id=PMC20138.1;transl_table=11 PNGG01000001.1 Genbank gene 61051 62400 . - . ID=gene-CJ235_00270;Name=CJ235_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00270 PNGG01000001.1 Protein Homology CDS 61051 62400 . - 0 ID=cds-PMC20139.1;Parent=gene-CJ235_00270;Dbxref=NCBI_GP:PMC20139.1;Name=PMC20139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764413.1;locus_tag=CJ235_00270;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=PMC20139.1;transl_table=11 PNGG01000001.1 Genbank gene 62406 63371 . - . ID=gene-CJ235_00275;Name=CJ235_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00275 PNGG01000001.1 Protein Homology CDS 62406 63371 . - 0 ID=cds-PMC20140.1;Parent=gene-CJ235_00275;Dbxref=NCBI_GP:PMC20140.1;Name=PMC20140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764412.1;locus_tag=CJ235_00275;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=PMC20140.1;transl_table=11 PNGG01000001.1 Genbank gene 63574 65910 . - . ID=gene-CJ235_00280;Name=CJ235_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00280 PNGG01000001.1 Protein Homology CDS 63574 65910 . - 0 ID=cds-PMC20141.1;Parent=gene-CJ235_00280;Dbxref=NCBI_GP:PMC20141.1;Name=PMC20141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469310.1;locus_tag=CJ235_00280;product=PASTA domain-containing protein;protein_id=PMC20141.1;transl_table=11 PNGG01000001.1 Genbank gene 65891 66286 . - . ID=gene-CJ235_00285;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CJ235_00285 PNGG01000001.1 Protein Homology CDS 65891 66286 . - 0 ID=cds-PMC20142.1;Parent=gene-CJ235_00285;Dbxref=NCBI_GP:PMC20142.1;Name=PMC20142.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764410.1;locus_tag=CJ235_00285;product=cell division protein FtsL;protein_id=PMC20142.1;transl_table=11 PNGG01000001.1 Genbank gene 66303 67238 . - . ID=gene-CJ235_00290;Name=CJ235_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00290 PNGG01000001.1 Protein Homology CDS 66303 67238 . - 0 ID=cds-PMC20143.1;Parent=gene-CJ235_00290;Dbxref=NCBI_GP:PMC20143.1;Name=PMC20143.1;Note=catalyzes the methylation of the N4 position of C1402 on the 16S rRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CJ235_00290;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=PMC20143.1;transl_table=11 PNGG01000001.1 Genbank gene 67254 67685 . - . ID=gene-CJ235_00295;Name=CJ235_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00295 PNGG01000001.1 Protein Homology CDS 67254 67685 . - 0 ID=cds-PMC20144.1;Parent=gene-CJ235_00295;Dbxref=NCBI_GP:PMC20144.1;Name=PMC20144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CJ235_00295;product=transcriptional regulator MraZ;protein_id=PMC20144.1;transl_table=11 PNGG01000001.1 Genbank gene 67835 69448 . - . ID=gene-CJ235_00300;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CJ235_00300 PNGG01000001.1 Protein Homology CDS 67835 69448 . - 0 ID=cds-PMC20145.1;Parent=gene-CJ235_00300;Dbxref=NCBI_GP:PMC20145.1;Name=PMC20145.1;gbkey=CDS;gene=bshC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507942.1;locus_tag=CJ235_00300;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=PMC20145.1;transl_table=11 PNGG01000001.1 Genbank gene 69678 70124 . + . ID=gene-CJ235_00305;Name=CJ235_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00305 PNGG01000001.1 Protein Homology CDS 69678 70124 . + 0 ID=cds-PMC20146.1;Parent=gene-CJ235_00305;Dbxref=NCBI_GP:PMC20146.1;Name=PMC20146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614188.1;locus_tag=CJ235_00305;product=GNAT family N-acetyltransferase;protein_id=PMC20146.1;transl_table=11 PNGG01000001.1 Genbank gene 70219 70899 . - . ID=gene-CJ235_00310;Name=CJ235_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00310 PNGG01000001.1 Protein Homology CDS 70219 70899 . - 0 ID=cds-PMC20147.1;Parent=gene-CJ235_00310;Dbxref=NCBI_GP:PMC20147.1;Name=PMC20147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276025.1;locus_tag=CJ235_00310;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=PMC20147.1;transl_table=11 PNGG01000001.1 Genbank gene 71190 71263 . + . ID=gene-CJ235_00315;Name=CJ235_00315;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_00315 PNGG01000001.1 tRNAscan-SE tRNA 71190 71263 . + . ID=rna-CJ235_00315;Parent=gene-CJ235_00315;anticodon=(pos:71224..71226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_00315;product=tRNA-Arg PNGG01000001.1 tRNAscan-SE exon 71190 71263 . + . ID=exon-CJ235_00315-1;Parent=rna-CJ235_00315;anticodon=(pos:71224..71226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_00315;product=tRNA-Arg PNGG01000001.1 Genbank gene 71553 72116 . - . ID=gene-CJ235_00320;Name=CJ235_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00320 PNGG01000001.1 Protein Homology CDS 71553 72116 . - 0 ID=cds-PMC20148.1;Parent=gene-CJ235_00320;Dbxref=NCBI_GP:PMC20148.1;Name=PMC20148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458614.1;locus_tag=CJ235_00320;product=hypothetical protein;protein_id=PMC20148.1;transl_table=11 PNGG01000001.1 Genbank gene 72269 72475 . - . ID=gene-CJ235_00325;Name=CJ235_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00325 PNGG01000001.1 Protein Homology CDS 72269 72475 . - 0 ID=cds-PMC20149.1;Parent=gene-CJ235_00325;Dbxref=NCBI_GP:PMC20149.1;Name=PMC20149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500513.1;locus_tag=CJ235_00325;product=hypothetical protein;protein_id=PMC20149.1;transl_table=11 PNGG01000001.1 Genbank gene 72462 72572 . - . ID=gene-CJ235_00330;Name=CJ235_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00330 PNGG01000001.1 Protein Homology CDS 72462 72572 . - 0 ID=cds-PMC20150.1;Parent=gene-CJ235_00330;Dbxref=NCBI_GP:PMC20150.1;Name=PMC20150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500514.1;locus_tag=CJ235_00330;product=hypothetical protein;protein_id=PMC20150.1;transl_table=11 PNGG01000001.1 Genbank gene 72643 72771 . - . ID=gene-CJ235_00335;Name=CJ235_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00335 PNGG01000001.1 Protein Homology CDS 72643 72771 . - 0 ID=cds-PMC20151.1;Parent=gene-CJ235_00335;Dbxref=NCBI_GP:PMC20151.1;Name=PMC20151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898262.1;locus_tag=CJ235_00335;product=hypothetical protein;protein_id=PMC20151.1;transl_table=11 PNGG01000001.1 Genbank gene 72945 74408 . - . ID=gene-CJ235_00340;Name=CJ235_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00340 PNGG01000001.1 Protein Homology CDS 72945 74408 . - 0 ID=cds-PMC20152.1;Parent=gene-CJ235_00340;Dbxref=NCBI_GP:PMC20152.1;Name=PMC20152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456421.1;locus_tag=CJ235_00340;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PMC20152.1;transl_table=11 PNGG01000001.1 Genbank gene 74383 74793 . - . ID=gene-CJ235_00345;Name=CJ235_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00345 PNGG01000001.1 Protein Homology CDS 74383 74793 . - 0 ID=cds-PMC20153.1;Parent=gene-CJ235_00345;Dbxref=NCBI_GP:PMC20153.1;Name=PMC20153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499220.1;locus_tag=CJ235_00345;product=phage holin;protein_id=PMC20153.1;transl_table=11 PNGG01000001.1 Genbank gene 74824 75360 . - . ID=gene-CJ235_00350;Name=CJ235_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00350 PNGG01000001.1 Protein Homology CDS 74824 75360 . - 0 ID=cds-PMC20154.1;Parent=gene-CJ235_00350;Dbxref=NCBI_GP:PMC20154.1;Name=PMC20154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469977.1;locus_tag=CJ235_00350;product=hypothetical protein;protein_id=PMC20154.1;transl_table=11 PNGG01000001.1 Genbank gene 75357 75863 . - . ID=gene-CJ235_00355;Name=CJ235_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00355 PNGG01000001.1 Protein Homology CDS 75357 75863 . - 0 ID=cds-PMC20155.1;Parent=gene-CJ235_00355;Dbxref=NCBI_GP:PMC20155.1;Name=PMC20155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475504.1;locus_tag=CJ235_00355;product=hypothetical protein;protein_id=PMC20155.1;transl_table=11 PNGG01000001.1 Genbank gene 75904 76050 . - . ID=gene-CJ235_00360;Name=CJ235_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00360 PNGG01000001.1 Protein Homology CDS 75904 76050 . - 0 ID=cds-PMC20156.1;Parent=gene-CJ235_00360;Dbxref=NCBI_GP:PMC20156.1;Name=PMC20156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488913.1;locus_tag=CJ235_00360;product=XkdX family protein;protein_id=PMC20156.1;transl_table=11 PNGG01000001.1 Genbank gene 76043 76372 . - . ID=gene-CJ235_00365;Name=CJ235_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00365 PNGG01000001.1 Protein Homology CDS 76043 76372 . - 0 ID=cds-PMC20157.1;Parent=gene-CJ235_00365;Dbxref=NCBI_GP:PMC20157.1;Name=PMC20157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495860.1;locus_tag=CJ235_00365;product=hypothetical protein;protein_id=PMC20157.1;transl_table=11 PNGG01000001.1 Genbank gene 76384 77379 . - . ID=gene-CJ235_00370;Name=CJ235_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00370 PNGG01000001.1 Protein Homology CDS 76384 77379 . - 0 ID=cds-PMC20158.1;Parent=gene-CJ235_00370;Dbxref=NCBI_GP:PMC20158.1;Name=PMC20158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064907.1;locus_tag=CJ235_00370;product=hypothetical protein;protein_id=PMC20158.1;transl_table=11 PNGG01000001.1 Genbank gene 77434 79332 . - . ID=gene-CJ235_00375;Name=CJ235_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00375 PNGG01000001.1 Protein Homology CDS 77434 79332 . - 0 ID=cds-PMC20159.1;Parent=gene-CJ235_00375;Dbxref=NCBI_GP:PMC20159.1;Name=PMC20159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493362.1;locus_tag=CJ235_00375;product=CHAP domain-containing protein;protein_id=PMC20159.1;transl_table=11 PNGG01000001.1 Genbank gene 79385 79783 . - . ID=gene-CJ235_00380;Name=CJ235_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00380 PNGG01000001.1 Protein Homology CDS 79385 79783 . - 0 ID=cds-PMC20160.1;Parent=gene-CJ235_00380;Dbxref=NCBI_GP:PMC20160.1;Name=PMC20160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465067.1;locus_tag=CJ235_00380;product=hypothetical protein;protein_id=PMC20160.1;transl_table=11 PNGG01000001.1 Genbank gene 79764 80186 . - . ID=gene-CJ235_00385;Name=CJ235_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00385 PNGG01000001.1 Protein Homology CDS 79764 80186 . - 0 ID=cds-PMC20161.1;Parent=gene-CJ235_00385;Dbxref=NCBI_GP:PMC20161.1;Name=PMC20161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113758.1;locus_tag=CJ235_00385;product=hypothetical protein;protein_id=PMC20161.1;transl_table=11 PNGG01000001.1 Genbank gene 80197 81384 . - . ID=gene-CJ235_00390;Name=CJ235_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00390 PNGG01000001.1 Protein Homology CDS 80197 81384 . - 0 ID=cds-PMC20162.1;Parent=gene-CJ235_00390;Dbxref=NCBI_GP:PMC20162.1;Name=PMC20162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502843.1;locus_tag=CJ235_00390;product=hypothetical protein;protein_id=PMC20162.1;transl_table=11 PNGG01000001.1 Genbank gene 81397 83283 . - . ID=gene-CJ235_00395;Name=CJ235_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00395 PNGG01000001.1 Protein Homology CDS 81397 83283 . - 0 ID=cds-PMC20163.1;Parent=gene-CJ235_00395;Dbxref=NCBI_GP:PMC20163.1;Name=PMC20163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469975.1;locus_tag=CJ235_00395;product=DUF2817 domain-containing protein;protein_id=PMC20163.1;transl_table=11 PNGG01000001.1 Genbank gene 83286 84746 . - . ID=gene-CJ235_00400;Name=CJ235_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00400 PNGG01000001.1 Protein Homology CDS 83286 84746 . - 0 ID=cds-PMC20164.1;Parent=gene-CJ235_00400;Dbxref=NCBI_GP:PMC20164.1;Name=PMC20164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436517.1;locus_tag=CJ235_00400;product=hypothetical protein;protein_id=PMC20164.1;transl_table=11 PNGG01000001.1 Genbank gene 84758 85714 . - . ID=gene-CJ235_00405;Name=CJ235_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00405 PNGG01000001.1 Protein Homology CDS 84758 85714 . - 0 ID=cds-PMC20165.1;Parent=gene-CJ235_00405;Dbxref=NCBI_GP:PMC20165.1;Name=PMC20165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113762.1;locus_tag=CJ235_00405;product=phage tail protein;protein_id=PMC20165.1;transl_table=11 PNGG01000001.1 Genbank gene 85726 89655 . - . ID=gene-CJ235_00410;Name=CJ235_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00410 PNGG01000001.1 Protein Homology CDS 85726 89655 . - 0 ID=cds-PMC20166.1;Parent=gene-CJ235_00410;Dbxref=NCBI_GP:PMC20166.1;Name=PMC20166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495870.1;locus_tag=CJ235_00410;product=phage tail protein;protein_id=PMC20166.1;transl_table=11 PNGG01000001.1 Genbank gene 89670 90014 . - . ID=gene-CJ235_00415;Name=CJ235_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00415 PNGG01000001.1 Protein Homology CDS 89670 90014 . - 0 ID=cds-PMC20167.1;Parent=gene-CJ235_00415;Dbxref=NCBI_GP:PMC20167.1;Name=PMC20167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436496.1;locus_tag=CJ235_00415;product=hypothetical protein;protein_id=PMC20167.1;transl_table=11 PNGG01000001.1 Genbank gene 90056 90415 . - . ID=gene-CJ235_00420;Name=CJ235_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00420 PNGG01000001.1 Protein Homology CDS 90056 90415 . - 0 ID=cds-PMC20168.1;Parent=gene-CJ235_00420;Dbxref=NCBI_GP:PMC20168.1;Name=PMC20168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469976.1;locus_tag=CJ235_00420;product=phage tail protein;protein_id=PMC20168.1;transl_table=11 PNGG01000001.1 Genbank gene 90479 91033 . - . ID=gene-CJ235_00425;Name=CJ235_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00425 PNGG01000001.1 Protein Homology CDS 90479 91033 . - 0 ID=cds-PMC20169.1;Parent=gene-CJ235_00425;Dbxref=NCBI_GP:PMC20169.1;Name=PMC20169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469994.1;locus_tag=CJ235_00425;product=phage major tail protein%2C TP901-1 family;protein_id=PMC20169.1;transl_table=11 PNGG01000001.1 Genbank gene 91076 91465 . - . ID=gene-CJ235_00430;Name=CJ235_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00430 PNGG01000001.1 Protein Homology CDS 91076 91465 . - 0 ID=cds-PMC20170.1;Parent=gene-CJ235_00430;Dbxref=NCBI_GP:PMC20170.1;Name=PMC20170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113764.1;locus_tag=CJ235_00430;product=hypothetical protein;protein_id=PMC20170.1;transl_table=11 PNGG01000001.1 Genbank gene 91465 91827 . - . ID=gene-CJ235_00435;Name=CJ235_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00435 PNGG01000001.1 Protein Homology CDS 91465 91827 . - 0 ID=cds-PMC20171.1;Parent=gene-CJ235_00435;Dbxref=NCBI_GP:PMC20171.1;Name=PMC20171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113765.1;locus_tag=CJ235_00435;product=hypothetical protein;protein_id=PMC20171.1;transl_table=11 PNGG01000001.1 Genbank gene 91827 92129 . - . ID=gene-CJ235_00440;Name=CJ235_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00440 PNGG01000001.1 Protein Homology CDS 91827 92129 . - 0 ID=cds-PMC20172.1;Parent=gene-CJ235_00440;Dbxref=NCBI_GP:PMC20172.1;Name=PMC20172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898278.1;locus_tag=CJ235_00440;product=hypothetical protein;protein_id=PMC20172.1;transl_table=11 PNGG01000001.1 Genbank gene 92126 92455 . - . ID=gene-CJ235_00445;Name=CJ235_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00445 PNGG01000001.1 Protein Homology CDS 92126 92455 . - 0 ID=cds-PMC20173.1;Parent=gene-CJ235_00445;Dbxref=NCBI_GP:PMC20173.1;Name=PMC20173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478893.1;locus_tag=CJ235_00445;product=phage head-tail adapter protein;protein_id=PMC20173.1;transl_table=11 PNGG01000001.1 Genbank gene 92457 92726 . - . ID=gene-CJ235_00450;Name=CJ235_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00450 PNGG01000001.1 Protein Homology CDS 92457 92726 . - 0 ID=cds-PMC20174.1;Parent=gene-CJ235_00450;Dbxref=NCBI_GP:PMC20174.1;Name=PMC20174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493377.1;locus_tag=CJ235_00450;product=hypothetical protein;protein_id=PMC20174.1;transl_table=11 PNGG01000001.1 Genbank gene 92747 93676 . - . ID=gene-CJ235_00455;Name=CJ235_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00455 PNGG01000001.1 Protein Homology CDS 92747 93676 . - 0 ID=cds-PMC20175.1;Parent=gene-CJ235_00455;Dbxref=NCBI_GP:PMC20175.1;Name=PMC20175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502855.1;locus_tag=CJ235_00455;product=phage major capsid protein;protein_id=PMC20175.1;transl_table=11 PNGG01000001.1 Genbank gene 93693 94298 . - . ID=gene-CJ235_00460;Name=CJ235_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00460 PNGG01000001.1 Protein Homology CDS 93693 94298 . - 0 ID=cds-PMC20176.1;Parent=gene-CJ235_00460;Dbxref=NCBI_GP:PMC20176.1;Name=PMC20176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465053.1;locus_tag=CJ235_00460;product=scaffolding protein;protein_id=PMC20176.1;transl_table=11 PNGG01000001.1 Genbank gene 94688 95233 . - . ID=gene-CJ235_00465;Name=CJ235_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00465 PNGG01000001.1 Protein Homology CDS 94688 95233 . - 0 ID=cds-PMC20177.1;Parent=gene-CJ235_00465;Dbxref=NCBI_GP:PMC20177.1;Name=PMC20177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465051.1;locus_tag=CJ235_00465;product=hypothetical protein;protein_id=PMC20177.1;transl_table=11 PNGG01000001.1 Genbank gene 95253 96203 . - . ID=gene-CJ235_00470;Name=CJ235_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00470 PNGG01000001.1 Protein Homology CDS 95253 96203 . - 0 ID=cds-PMC20178.1;Parent=gene-CJ235_00470;Dbxref=NCBI_GP:PMC20178.1;Name=PMC20178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533264.1;locus_tag=CJ235_00470;product=phage head morphogenesis protein;protein_id=PMC20178.1;transl_table=11 PNGG01000001.1 Genbank gene 96210 97739 . - . ID=gene-CJ235_00475;Name=CJ235_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00475 PNGG01000001.1 Protein Homology CDS 96210 97739 . - 0 ID=cds-PMC20179.1;Parent=gene-CJ235_00475;Dbxref=NCBI_GP:PMC20179.1;Name=PMC20179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497091.1;locus_tag=CJ235_00475;product=phage portal protein;protein_id=PMC20179.1;transl_table=11 PNGG01000001.1 Genbank gene 97751 99037 . - . ID=gene-CJ235_00480;Name=CJ235_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00480 PNGG01000001.1 Protein Homology CDS 97751 99037 . - 0 ID=cds-PMC20180.1;Parent=gene-CJ235_00480;Dbxref=NCBI_GP:PMC20180.1;Name=PMC20180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497092.1;locus_tag=CJ235_00480;product=PBSX family phage terminase large subunit;protein_id=PMC20180.1;transl_table=11 PNGG01000001.1 Genbank gene 99040 99426 . - . ID=gene-CJ235_00485;Name=CJ235_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00485 PNGG01000001.1 Protein Homology CDS 99040 99426 . - 0 ID=cds-PMC20181.1;Parent=gene-CJ235_00485;Dbxref=NCBI_GP:PMC20181.1;Name=PMC20181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475597.1;locus_tag=CJ235_00485;product=DNA-binding protein;protein_id=PMC20181.1;transl_table=11 PNGG01000001.1 Genbank gene 99671 100072 . - . ID=gene-CJ235_00490;Name=CJ235_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00490 PNGG01000001.1 Protein Homology CDS 99671 100072 . - 0 ID=cds-PMC20182.1;Parent=gene-CJ235_00490;Dbxref=NCBI_GP:PMC20182.1;Name=PMC20182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469980.1;locus_tag=CJ235_00490;product=hypothetical protein;protein_id=PMC20182.1;transl_table=11 PNGG01000001.1 Genbank gene 100146 100316 . - . ID=gene-CJ235_00495;Name=CJ235_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00495 PNGG01000001.1 Protein Homology CDS 100146 100316 . - 0 ID=cds-PMC20183.1;Parent=gene-CJ235_00495;Dbxref=NCBI_GP:PMC20183.1;Name=PMC20183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436429.1;locus_tag=CJ235_00495;product=regulator;protein_id=PMC20183.1;transl_table=11 PNGG01000001.1 Genbank gene 100365 100787 . - . ID=gene-CJ235_00500;Name=CJ235_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00500 PNGG01000001.1 Protein Homology CDS 100365 100787 . - 0 ID=cds-PMC20184.1;Parent=gene-CJ235_00500;Dbxref=NCBI_GP:PMC20184.1;Name=PMC20184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474330.1;locus_tag=CJ235_00500;product=dUTP diphosphatase;protein_id=PMC20184.1;transl_table=11 PNGG01000001.1 Genbank gene 100788 101033 . - . ID=gene-CJ235_00505;Name=CJ235_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00505 PNGG01000001.1 Protein Homology CDS 100788 101033 . - 0 ID=cds-PMC20185.1;Parent=gene-CJ235_00505;Dbxref=NCBI_GP:PMC20185.1;Name=PMC20185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469748.1;locus_tag=CJ235_00505;product=hypothetical protein;protein_id=PMC20185.1;transl_table=11 PNGG01000001.1 Genbank gene 101220 101414 . - . ID=gene-CJ235_00510;Name=CJ235_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00510 PNGG01000001.1 GeneMarkS+ CDS 101220 101414 . - 0 ID=cds-PMC20186.1;Parent=gene-CJ235_00510;Dbxref=NCBI_GP:PMC20186.1;Name=PMC20186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00510;product=hypothetical protein;protein_id=PMC20186.1;transl_table=11 PNGG01000001.1 Genbank gene 101417 101896 . - . ID=gene-CJ235_00515;Name=CJ235_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00515 PNGG01000001.1 Protein Homology CDS 101417 101896 . - 0 ID=cds-PMC20187.1;Parent=gene-CJ235_00515;Dbxref=NCBI_GP:PMC20187.1;Name=PMC20187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899742.1;locus_tag=CJ235_00515;product=hypothetical protein;protein_id=PMC20187.1;transl_table=11 PNGG01000001.1 Genbank gene 101889 102200 . - . ID=gene-CJ235_00520;Name=CJ235_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00520 PNGG01000001.1 Protein Homology CDS 101889 102200 . - 0 ID=cds-PMC20188.1;Parent=gene-CJ235_00520;Dbxref=NCBI_GP:PMC20188.1;Name=PMC20188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498308.1;locus_tag=CJ235_00520;product=hypothetical protein;protein_id=PMC20188.1;transl_table=11 PNGG01000001.1 Genbank gene 102130 102537 . - . ID=gene-CJ235_00525;Name=CJ235_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00525 PNGG01000001.1 GeneMarkS+ CDS 102130 102537 . - 0 ID=cds-PMC20189.1;Parent=gene-CJ235_00525;Dbxref=NCBI_GP:PMC20189.1;Name=PMC20189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00525;product=hypothetical protein;protein_id=PMC20189.1;transl_table=11 PNGG01000001.1 Genbank gene 102548 102763 . - . ID=gene-CJ235_00530;Name=CJ235_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00530 PNGG01000001.1 GeneMarkS+ CDS 102548 102763 . - 0 ID=cds-PMC20190.1;Parent=gene-CJ235_00530;Dbxref=NCBI_GP:PMC20190.1;Name=PMC20190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00530;product=hypothetical protein;protein_id=PMC20190.1;transl_table=11 PNGG01000001.1 Genbank gene 102768 103166 . - . ID=gene-CJ235_00535;Name=CJ235_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00535 PNGG01000001.1 Protein Homology CDS 102768 103166 . - 0 ID=cds-PMC20191.1;Parent=gene-CJ235_00535;Dbxref=NCBI_GP:PMC20191.1;Name=PMC20191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899738.1;locus_tag=CJ235_00535;product=RusA family crossover junction endodeoxyribonuclease;protein_id=PMC20191.1;transl_table=11 PNGG01000001.1 Genbank gene 103175 103405 . - . ID=gene-CJ235_00540;Name=CJ235_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00540 PNGG01000001.1 GeneMarkS+ CDS 103175 103405 . - 0 ID=cds-PMC20192.1;Parent=gene-CJ235_00540;Dbxref=NCBI_GP:PMC20192.1;Name=PMC20192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00540;product=hypothetical protein;protein_id=PMC20192.1;transl_table=11 PNGG01000001.1 Genbank gene 103389 103598 . - . ID=gene-CJ235_00545;Name=CJ235_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00545 PNGG01000001.1 GeneMarkS+ CDS 103389 103598 . - 0 ID=cds-PMC20193.1;Parent=gene-CJ235_00545;Dbxref=NCBI_GP:PMC20193.1;Name=PMC20193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00545;product=hypothetical protein;protein_id=PMC20193.1;transl_table=11 PNGG01000001.1 Genbank gene 103598 104845 . - . ID=gene-CJ235_00550;Name=CJ235_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00550 PNGG01000001.1 Protein Homology CDS 103598 104845 . - 0 ID=cds-PMC20194.1;Parent=gene-CJ235_00550;Dbxref=NCBI_GP:PMC20194.1;Name=PMC20194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504191.1;locus_tag=CJ235_00550;product=damage-inducible protein;protein_id=PMC20194.1;transl_table=11 PNGG01000001.1 Genbank gene 104838 105188 . - . ID=gene-CJ235_00555;Name=CJ235_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00555 PNGG01000001.1 Protein Homology CDS 104838 105188 . - 0 ID=cds-PMC20195.1;Parent=gene-CJ235_00555;Dbxref=NCBI_GP:PMC20195.1;Name=PMC20195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636921.1;locus_tag=CJ235_00555;product=hypothetical protein;protein_id=PMC20195.1;transl_table=11 PNGG01000001.1 Genbank gene 105194 105919 . - . ID=gene-CJ235_00560;Name=CJ235_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00560 PNGG01000001.1 Protein Homology CDS 105194 105919 . - 0 ID=cds-PMC20196.1;Parent=gene-CJ235_00560;Dbxref=NCBI_GP:PMC20196.1;Name=PMC20196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175694.1;locus_tag=CJ235_00560;product=DNA replication protein DnaD;protein_id=PMC20196.1;transl_table=11 PNGG01000001.1 Genbank gene 105916 106584 . - . ID=gene-CJ235_00565;Name=CJ235_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00565 PNGG01000001.1 Protein Homology CDS 105916 106584 . - 0 ID=cds-PMC20197.1;Parent=gene-CJ235_00565;Dbxref=NCBI_GP:PMC20197.1;Name=PMC20197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465029.1;locus_tag=CJ235_00565;product=hypothetical protein;protein_id=PMC20197.1;transl_table=11 PNGG01000001.1 Genbank gene 106595 107017 . - . ID=gene-CJ235_00570;Name=CJ235_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00570 PNGG01000001.1 Protein Homology CDS 106595 107017 . - 0 ID=cds-PMC20198.1;Parent=gene-CJ235_00570;Dbxref=NCBI_GP:PMC20198.1;Name=PMC20198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001099006.1;locus_tag=CJ235_00570;product=single-stranded DNA-binding protein;protein_id=PMC20198.1;transl_table=11 PNGG01000001.1 Genbank gene 107017 107688 . - . ID=gene-CJ235_00575;Name=CJ235_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00575 PNGG01000001.1 Protein Homology CDS 107017 107688 . - 0 ID=cds-PMC20199.1;Parent=gene-CJ235_00575;Dbxref=NCBI_GP:PMC20199.1;Name=PMC20199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465027.1;locus_tag=CJ235_00575;product=single-stranded DNA-binding protein;protein_id=PMC20199.1;transl_table=11 PNGG01000001.1 Genbank gene 107681 107905 . - . ID=gene-CJ235_00580;Name=CJ235_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00580 PNGG01000001.1 Protein Homology CDS 107681 107905 . - 0 ID=cds-PMC20200.1;Parent=gene-CJ235_00580;Dbxref=NCBI_GP:PMC20200.1;Name=PMC20200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175699.1;locus_tag=CJ235_00580;product=hypothetical protein;protein_id=PMC20200.1;transl_table=11 PNGG01000001.1 Genbank gene 108160 108471 . - . ID=gene-CJ235_00585;Name=CJ235_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00585 PNGG01000001.1 Protein Homology CDS 108160 108471 . - 0 ID=cds-PMC20201.1;Parent=gene-CJ235_00585;Dbxref=NCBI_GP:PMC20201.1;Name=PMC20201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276075.1;locus_tag=CJ235_00585;product=DUF771 domain-containing protein;protein_id=PMC20201.1;transl_table=11 PNGG01000001.1 Genbank gene 108534 109190 . + . ID=gene-CJ235_00590;Name=CJ235_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00590 PNGG01000001.1 Protein Homology CDS 108534 109190 . + 0 ID=cds-PMC20202.1;Parent=gene-CJ235_00590;Dbxref=NCBI_GP:PMC20202.1;Name=PMC20202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474298.1;locus_tag=CJ235_00590;product=hypothetical protein;protein_id=PMC20202.1;transl_table=11 PNGG01000001.1 Genbank gene 109836 110429 . - . ID=gene-CJ235_00595;Name=CJ235_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00595 PNGG01000001.1 GeneMarkS+ CDS 109836 110429 . - 0 ID=cds-PMC20203.1;Parent=gene-CJ235_00595;Dbxref=NCBI_GP:PMC20203.1;Name=PMC20203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00595;product=30S ribosomal protein S15;protein_id=PMC20203.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 110794 111345 . - . ID=gene-CJ235_00600;Name=CJ235_00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_00600;pseudo=true PNGG01000001.1 Protein Homology CDS 110794 111345 . - 0 ID=cds-CJ235_00600;Parent=gene-CJ235_00600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168039.1;locus_tag=CJ235_00600;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 111393 111632 . + . ID=gene-CJ235_00605;Name=CJ235_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00605 PNGG01000001.1 Protein Homology CDS 111393 111632 . + 0 ID=cds-PMC20204.1;Parent=gene-CJ235_00605;Dbxref=NCBI_GP:PMC20204.1;Name=PMC20204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475580.1;locus_tag=CJ235_00605;product=hypothetical protein;protein_id=PMC20204.1;transl_table=11 PNGG01000001.1 Genbank gene 111622 111801 . - . ID=gene-CJ235_00610;Name=CJ235_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00610 PNGG01000001.1 Protein Homology CDS 111622 111801 . - 0 ID=cds-PMC20205.1;Parent=gene-CJ235_00610;Dbxref=NCBI_GP:PMC20205.1;Name=PMC20205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475588.1;locus_tag=CJ235_00610;product=hypothetical protein;protein_id=PMC20205.1;transl_table=11 PNGG01000001.1 Genbank gene 111814 112260 . - . ID=gene-CJ235_00615;Name=CJ235_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00615 PNGG01000001.1 Protein Homology CDS 111814 112260 . - 0 ID=cds-PMC20206.1;Parent=gene-CJ235_00615;Dbxref=NCBI_GP:PMC20206.1;Name=PMC20206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497127.1;locus_tag=CJ235_00615;product=hypothetical protein;protein_id=PMC20206.1;transl_table=11 PNGG01000001.1 Genbank gene 112278 112502 . - . ID=gene-CJ235_00620;Name=CJ235_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00620 PNGG01000001.1 Protein Homology CDS 112278 112502 . - 0 ID=cds-PMC20207.1;Parent=gene-CJ235_00620;Dbxref=NCBI_GP:PMC20207.1;Name=PMC20207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000333487.1;locus_tag=CJ235_00620;product=DUF739 domain-containing protein;protein_id=PMC20207.1;transl_table=11 PNGG01000001.1 Genbank gene 112664 113044 . + . ID=gene-CJ235_00625;Name=CJ235_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00625 PNGG01000001.1 Protein Homology CDS 112664 113044 . + 0 ID=cds-PMC20208.1;Parent=gene-CJ235_00625;Dbxref=NCBI_GP:PMC20208.1;Name=PMC20208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089476.1;locus_tag=CJ235_00625;product=transcriptional regulator;protein_id=PMC20208.1;transl_table=11 PNGG01000001.1 Genbank gene 113066 113524 . + . ID=gene-CJ235_00630;Name=CJ235_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00630 PNGG01000001.1 Protein Homology CDS 113066 113524 . + 0 ID=cds-PMC20209.1;Parent=gene-CJ235_00630;Dbxref=NCBI_GP:PMC20209.1;Name=PMC20209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436488.1;locus_tag=CJ235_00630;product=toxin;protein_id=PMC20209.1;transl_table=11 PNGG01000001.1 Genbank gene 113541 114866 . + . ID=gene-CJ235_00635;Name=CJ235_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00635 PNGG01000001.1 Protein Homology CDS 113541 114866 . + 0 ID=cds-PMC20210.1;Parent=gene-CJ235_00635;Dbxref=NCBI_GP:PMC20210.1;Name=PMC20210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113852.1;locus_tag=CJ235_00635;product=envelope stress response membrane protein PspB;protein_id=PMC20210.1;transl_table=11 PNGG01000001.1 Genbank gene 114925 115950 . + . ID=gene-CJ235_00640;Name=CJ235_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00640 PNGG01000001.1 Protein Homology CDS 114925 115950 . + 0 ID=cds-PMC20211.1;Parent=gene-CJ235_00640;Dbxref=NCBI_GP:PMC20211.1;Name=PMC20211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365171.1;locus_tag=CJ235_00640;product=site-specific integrase;protein_id=PMC20211.1;transl_table=11 PNGG01000001.1 Genbank gene 116241 117026 . - . ID=gene-CJ235_00645;Name=CJ235_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00645 PNGG01000001.1 GeneMarkS+ CDS 116241 117026 . - 0 ID=cds-PMC20212.1;Parent=gene-CJ235_00645;Dbxref=NCBI_GP:PMC20212.1;Name=PMC20212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_00645;product=hypothetical protein;protein_id=PMC20212.1;transl_table=11 PNGG01000001.1 Genbank gene 117520 118035 . - . ID=gene-CJ235_00650;Name=CJ235_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00650 PNGG01000001.1 Protein Homology CDS 117520 118035 . - 0 ID=cds-PMC20213.1;Parent=gene-CJ235_00650;Dbxref=NCBI_GP:PMC20213.1;Name=PMC20213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472873.1;locus_tag=CJ235_00650;product=metallophosphoesterase;protein_id=PMC20213.1;transl_table=11 PNGG01000001.1 Genbank gene 118032 118616 . - . ID=gene-CJ235_00655;Name=CJ235_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00655 PNGG01000001.1 Protein Homology CDS 118032 118616 . - 0 ID=cds-PMC20214.1;Parent=gene-CJ235_00655;Dbxref=NCBI_GP:PMC20214.1;Name=PMC20214.1;Note=hydrolyzes non-standard nucleotides such as xanthine and inosine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472847.1;locus_tag=CJ235_00655;product=non-canonical purine NTP pyrophosphatase;protein_id=PMC20214.1;transl_table=11 PNGG01000001.1 Genbank gene 118616 119428 . - . ID=gene-CJ235_00660;Name=CJ235_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00660 PNGG01000001.1 Protein Homology CDS 118616 119428 . - 0 ID=cds-PMC20215.1;Parent=gene-CJ235_00660;Dbxref=NCBI_GP:PMC20215.1;Name=PMC20215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472879.1;locus_tag=CJ235_00660;product=glutamate racemase;protein_id=PMC20215.1;transl_table=11 PNGG01000001.1 Genbank gene 119914 120714 . - . ID=gene-CJ235_00665;Name=CJ235_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00665 PNGG01000001.1 Protein Homology CDS 119914 120714 . - 0 ID=cds-PMC20216.1;Parent=gene-CJ235_00665;Dbxref=NCBI_GP:PMC20216.1;Name=PMC20216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510896.1;locus_tag=CJ235_00665;product=succinate dehydrogenase iron-sulfur subunit;protein_id=PMC20216.1;transl_table=11 PNGG01000001.1 Genbank gene 120714 122480 . - . ID=gene-CJ235_00670;Name=CJ235_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00670 PNGG01000001.1 Protein Homology CDS 120714 122480 . - 0 ID=cds-PMC20217.1;Parent=gene-CJ235_00670;Dbxref=NCBI_GP:PMC20217.1;Name=PMC20217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=CJ235_00670;product=succinate dehydrogenase flavoprotein subunit;protein_id=PMC20217.1;transl_table=11 PNGG01000001.1 Genbank gene 122532 123152 . - . ID=gene-CJ235_00675;Name=CJ235_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00675 PNGG01000001.1 Protein Homology CDS 122532 123152 . - 0 ID=cds-PMC20218.1;Parent=gene-CJ235_00675;Dbxref=NCBI_GP:PMC20218.1;Name=PMC20218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303381.1;locus_tag=CJ235_00675;product=succinate dehydrogenase;protein_id=PMC20218.1;transl_table=11 PNGG01000001.1 Genbank gene 123464 125254 . - . ID=gene-CJ235_00680;Name=CJ235_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00680 PNGG01000001.1 Protein Homology CDS 123464 125254 . - 0 ID=cds-PMC20219.1;Parent=gene-CJ235_00680;Dbxref=NCBI_GP:PMC20219.1;Name=PMC20219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472839.1;locus_tag=CJ235_00680;product=excinuclease ABC subunit UvrC;protein_id=PMC20219.1;transl_table=11 PNGG01000001.1 Genbank gene 125447 125761 . - . ID=gene-CJ235_00685;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CJ235_00685 PNGG01000001.1 Protein Homology CDS 125447 125761 . - 0 ID=cds-PMC20220.1;Parent=gene-CJ235_00685;Dbxref=NCBI_GP:PMC20220.1;Name=PMC20220.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764393.1;locus_tag=CJ235_00685;product=thioredoxin;protein_id=PMC20220.1;transl_table=11 PNGG01000001.1 Genbank gene 125842 128193 . - . ID=gene-CJ235_00690;Name=CJ235_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00690 PNGG01000001.1 Protein Homology CDS 125842 128193 . - 0 ID=cds-PMC20221.1;Parent=gene-CJ235_00690;Dbxref=NCBI_GP:PMC20221.1;Name=PMC20221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764392.1;locus_tag=CJ235_00690;product=endonuclease MutS2;protein_id=PMC20221.1;transl_table=11 PNGG01000001.1 Genbank gene 128203 129912 . - . ID=gene-CJ235_00695;Name=CJ235_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00695 PNGG01000001.1 Protein Homology CDS 128203 129912 . - 0 ID=cds-PMC20222.1;Parent=gene-CJ235_00695;Dbxref=NCBI_GP:PMC20222.1;Name=PMC20222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764391.1;locus_tag=CJ235_00695;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=PMC20222.1;transl_table=11 PNGG01000001.1 Genbank gene 130010 130531 . - . ID=gene-CJ235_00700;Name=CJ235_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00700 PNGG01000001.1 Protein Homology CDS 130010 130531 . - 0 ID=cds-PMC20223.1;Parent=gene-CJ235_00700;Dbxref=NCBI_GP:PMC20223.1;Name=PMC20223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02674.14;locus_tag=CJ235_00700;product=colicin V production protein CvpA;protein_id=PMC20223.1;transl_table=11 PNGG01000001.1 Genbank gene 130528 130797 . - . ID=gene-CJ235_00705;Name=CJ235_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00705 PNGG01000001.1 Protein Homology CDS 130528 130797 . - 0 ID=cds-PMC20224.1;Parent=gene-CJ235_00705;Dbxref=NCBI_GP:PMC20224.1;Name=PMC20224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483638.1;locus_tag=CJ235_00705;product=cell division protein ZapA;protein_id=PMC20224.1;transl_table=11 PNGG01000001.1 Genbank gene 131087 132019 . + . ID=gene-CJ235_00710;Name=CJ235_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00710 PNGG01000001.1 Protein Homology CDS 131087 132019 . + 0 ID=cds-PMC20225.1;Parent=gene-CJ235_00710;Dbxref=NCBI_GP:PMC20225.1;Name=PMC20225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507966.1;locus_tag=CJ235_00710;product=ribonuclease HIII;protein_id=PMC20225.1;transl_table=11 PNGG01000001.1 Genbank gene 132435 134837 . - . ID=gene-CJ235_00715;Name=CJ235_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00715 PNGG01000001.1 Protein Homology CDS 132435 134837 . - 0 ID=cds-PMC20226.1;Parent=gene-CJ235_00715;Dbxref=NCBI_GP:PMC20226.1;Name=PMC20226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472862.1;locus_tag=CJ235_00715;product=phenylalanine--tRNA ligase subunit beta;protein_id=PMC20226.1;transl_table=11 PNGG01000001.1 Genbank gene 134831 135895 . - . ID=gene-CJ235_00720;Name=CJ235_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00720 PNGG01000001.1 Protein Homology CDS 134831 135895 . - 0 ID=cds-PMC20227.1;Parent=gene-CJ235_00720;Dbxref=NCBI_GP:PMC20227.1;Name=PMC20227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472859.1;locus_tag=CJ235_00720;product=phenylalanine--tRNA ligase subunit alpha;protein_id=PMC20227.1;transl_table=11 PNGG01000001.1 Genbank gene 136324 137064 . - . ID=gene-CJ235_00725;Name=CJ235_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00725 PNGG01000001.1 Protein Homology CDS 136324 137064 . - 0 ID=cds-PMC20228.1;Parent=gene-CJ235_00725;Dbxref=NCBI_GP:PMC20228.1;Name=PMC20228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455477.1;locus_tag=CJ235_00725;product=RNA methyltransferase;protein_id=PMC20228.1;transl_table=11 PNGG01000001.1 Genbank gene 137174 137347 . - . ID=gene-CJ235_00730;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CJ235_00730 PNGG01000001.1 Protein Homology CDS 137174 137347 . - 0 ID=cds-PMC20229.1;Parent=gene-CJ235_00730;Dbxref=NCBI_GP:PMC20229.1;Name=PMC20229.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CJ235_00730;product=50S ribosomal protein L32;protein_id=PMC20229.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 137291 137525 . + . ID=gene-CJ235_00735;Name=CJ235_00735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_00735;pseudo=true PNGG01000001.1 Protein Homology CDS 137291 137525 . + 0 ID=cds-CJ235_00735;Parent=gene-CJ235_00735;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001791487.1;locus_tag=CJ235_00735;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 137431 137976 . - . ID=gene-CJ235_00740;Name=CJ235_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00740 PNGG01000001.1 Protein Homology CDS 137431 137976 . - 0 ID=cds-PMC20230.1;Parent=gene-CJ235_00740;Dbxref=NCBI_GP:PMC20230.1;Name=PMC20230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472888.1;locus_tag=CJ235_00740;product=DNA-binding protein;protein_id=PMC20230.1;transl_table=11 PNGG01000001.1 Genbank gene 138172 139314 . + . ID=gene-CJ235_00745;Name=CJ235_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00745 PNGG01000001.1 Protein Homology CDS 138172 139314 . + 0 ID=cds-PMC20231.1;Parent=gene-CJ235_00745;Dbxref=NCBI_GP:PMC20231.1;Name=PMC20231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472827.1;locus_tag=CJ235_00745;product=nucleotidyltransferase;protein_id=PMC20231.1;transl_table=11 PNGG01000001.1 Genbank gene 139478 139969 . - . ID=gene-CJ235_00750;Name=CJ235_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00750 PNGG01000001.1 Protein Homology CDS 139478 139969 . - 0 ID=cds-PMC20232.1;Parent=gene-CJ235_00750;Dbxref=NCBI_GP:PMC20232.1;Name=PMC20232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472822.1;locus_tag=CJ235_00750;product=pantetheine-phosphate adenylyltransferase;protein_id=PMC20232.1;transl_table=11 PNGG01000001.1 Genbank gene 139956 140513 . - . ID=gene-CJ235_00755;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CJ235_00755 PNGG01000001.1 Protein Homology CDS 139956 140513 . - 0 ID=cds-PMC20233.1;Parent=gene-CJ235_00755;Dbxref=NCBI_GP:PMC20233.1;Name=PMC20233.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900001.1;locus_tag=CJ235_00755;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=PMC20233.1;transl_table=11 PNGG01000001.1 Genbank gene 140578 140967 . + . ID=gene-CJ235_00760;Name=CJ235_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00760 PNGG01000001.1 Protein Homology CDS 140578 140967 . + 0 ID=cds-PMC20234.1;Parent=gene-CJ235_00760;Dbxref=NCBI_GP:PMC20234.1;Name=PMC20234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472840.1;locus_tag=CJ235_00760;product=hypothetical protein;protein_id=PMC20234.1;transl_table=11 PNGG01000001.1 Genbank gene 140999 141250 . - . ID=gene-CJ235_00765;Name=CJ235_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00765 PNGG01000001.1 Protein Homology CDS 140999 141250 . - 0 ID=cds-PMC20235.1;Parent=gene-CJ235_00765;Dbxref=NCBI_GP:PMC20235.1;Name=PMC20235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472837.1;locus_tag=CJ235_00765;product=DUF2129 domain-containing protein;protein_id=PMC20235.1;transl_table=11 PNGG01000001.1 Genbank gene 141471 142403 . + . ID=gene-CJ235_00770;Name=CJ235_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00770 PNGG01000001.1 Protein Homology CDS 141471 142403 . + 0 ID=cds-PMC20236.1;Parent=gene-CJ235_00770;Dbxref=NCBI_GP:PMC20236.1;Name=PMC20236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452978.1;locus_tag=CJ235_00770;product=glycerophosphodiester phosphodiesterase;protein_id=PMC20236.1;transl_table=11 PNGG01000001.1 Genbank gene 142480 142914 . - . ID=gene-CJ235_00775;Name=CJ235_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00775 PNGG01000001.1 Protein Homology CDS 142480 142914 . - 0 ID=cds-PMC20237.1;Parent=gene-CJ235_00775;Dbxref=NCBI_GP:PMC20237.1;Name=PMC20237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483650.1;locus_tag=CJ235_00775;product=YlbF family regulator;protein_id=PMC20237.1;transl_table=11 PNGG01000001.1 Genbank gene 142932 143978 . - . ID=gene-CJ235_00780;Name=CJ235_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00780 PNGG01000001.1 Protein Homology CDS 142932 143978 . - 0 ID=cds-PMC20238.1;Parent=gene-CJ235_00780;Dbxref=NCBI_GP:PMC20238.1;Name=PMC20238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276110.1;locus_tag=CJ235_00780;product=SCP-like extracellular protein;protein_id=PMC20238.1;transl_table=11 PNGG01000001.1 Genbank gene 144125 146383 . + . ID=gene-CJ235_00785;Name=CJ235_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00785 PNGG01000001.1 Protein Homology CDS 144125 146383 . + 0 ID=cds-PMC20239.1;Parent=gene-CJ235_00785;Dbxref=NCBI_GP:PMC20239.1;Name=PMC20239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472883.1;locus_tag=CJ235_00785;product=excinuclease ABC subunit UvrA;protein_id=PMC20239.1;transl_table=11 PNGG01000001.1 Genbank gene 146514 146975 . - . ID=gene-CJ235_00790;Name=CJ235_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00790 PNGG01000001.1 Protein Homology CDS 146514 146975 . - 0 ID=cds-PMC20240.1;Parent=gene-CJ235_00790;Dbxref=NCBI_GP:PMC20240.1;Name=PMC20240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764371.1;locus_tag=CJ235_00790;product=DUF420 domain-containing protein;protein_id=PMC20240.1;transl_table=11 PNGG01000001.1 Genbank gene 147056 147967 . - . ID=gene-CJ235_00795;Name=CJ235_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00795 PNGG01000001.1 Protein Homology CDS 147056 147967 . - 0 ID=cds-PMC20241.1;Parent=gene-CJ235_00795;Dbxref=NCBI_GP:PMC20241.1;Name=PMC20241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483654.1;locus_tag=CJ235_00795;product=protoheme IX farnesyltransferase;protein_id=PMC20241.1;transl_table=11 PNGG01000001.1 Genbank gene 148978 149886 . + . ID=gene-CJ235_00800;Name=CJ235_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00800 PNGG01000001.1 Protein Homology CDS 148978 149886 . + 0 ID=cds-PMC20242.1;Parent=gene-CJ235_00800;Dbxref=NCBI_GP:PMC20242.1;Name=PMC20242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472885.1;locus_tag=CJ235_00800;product=heme A synthase;protein_id=PMC20242.1;transl_table=11 PNGG01000001.1 Genbank gene 149984 151219 . - . ID=gene-CJ235_00805;Name=CJ235_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00805 PNGG01000001.1 Protein Homology CDS 149984 151219 . - 0 ID=cds-PMC20243.1;Parent=gene-CJ235_00805;Dbxref=NCBI_GP:PMC20243.1;Name=PMC20243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472838.1;locus_tag=CJ235_00805;product=cell division protein FtsW;protein_id=PMC20243.1;transl_table=11 PNGG01000001.1 Genbank gene 152138 152413 . - . ID=gene-CJ235_00810;Name=CJ235_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00810 PNGG01000001.1 Protein Homology CDS 152138 152413 . - 0 ID=cds-PMC20244.1;Parent=gene-CJ235_00810;Dbxref=NCBI_GP:PMC20244.1;Name=PMC20244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507987.1;locus_tag=CJ235_00810;product=hypothetical protein;protein_id=PMC20244.1;transl_table=11 PNGG01000001.1 Genbank gene 152765 153247 . + . ID=gene-CJ235_00815;Name=CJ235_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00815 PNGG01000001.1 Protein Homology CDS 152765 153247 . + 0 ID=cds-PMC20245.1;Parent=gene-CJ235_00815;Dbxref=NCBI_GP:PMC20245.1;Name=PMC20245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472896.1;locus_tag=CJ235_00815;product=hypothetical protein;protein_id=PMC20245.1;transl_table=11 PNGG01000001.1 Genbank gene 153252 153425 . + . ID=gene-CJ235_00820;Name=CJ235_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00820 PNGG01000001.1 Protein Homology CDS 153252 153425 . + 0 ID=cds-PMC20246.1;Parent=gene-CJ235_00820;Dbxref=NCBI_GP:PMC20246.1;Name=PMC20246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510822.1;locus_tag=CJ235_00820;product=DUF2197 domain-containing protein;protein_id=PMC20246.1;transl_table=11 PNGG01000001.1 Genbank gene 153556 154740 . - . ID=gene-CJ235_00825;Name=CJ235_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00825 PNGG01000001.1 Protein Homology CDS 153556 154740 . - 0 ID=cds-PMC20247.1;Parent=gene-CJ235_00825;Dbxref=NCBI_GP:PMC20247.1;Name=PMC20247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=CJ235_00825;product=hypothetical protein;protein_id=PMC20247.1;transl_table=11 PNGG01000001.1 Genbank gene 154972 156819 . - . ID=gene-CJ235_00830;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CJ235_00830 PNGG01000001.1 Protein Homology CDS 154972 156819 . - 0 ID=cds-PMC20248.1;Parent=gene-CJ235_00830;Dbxref=NCBI_GP:PMC20248.1;Name=PMC20248.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764362.1;locus_tag=CJ235_00830;product=translational GTPase TypA;protein_id=PMC20248.1;transl_table=11 PNGG01000001.1 Genbank gene 156918 157118 . + . ID=gene-CJ235_00835;Name=CJ235_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00835 PNGG01000001.1 Protein Homology CDS 156918 157118 . + 0 ID=cds-PMC20249.1;Parent=gene-CJ235_00835;Dbxref=NCBI_GP:PMC20249.1;Name=PMC20249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510824.1;locus_tag=CJ235_00835;product=hypothetical protein;protein_id=PMC20249.1;transl_table=11 PNGG01000001.1 Genbank gene 157269 158087 . - . ID=gene-CJ235_00840;Name=CJ235_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00840 PNGG01000001.1 Protein Homology CDS 157269 158087 . - 0 ID=cds-PMC20250.1;Parent=gene-CJ235_00840;Dbxref=NCBI_GP:PMC20250.1;Name=PMC20250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467495.1;locus_tag=CJ235_00840;product=inositol monophosphatase family protein;protein_id=PMC20250.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 158293 158903 . + . ID=gene-CJ235_00845;Name=CJ235_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_00845;pseudo=true PNGG01000001.1 Protein Homology CDS 158293 158903 . + 0 ID=cds-CJ235_00845;Parent=gene-CJ235_00845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471915.1;locus_tag=CJ235_00845;product=DUF1054 domain-containing protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 159005 159499 . - . ID=gene-CJ235_00850;Name=CJ235_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00850 PNGG01000001.1 Protein Homology CDS 159005 159499 . - 0 ID=cds-PMC20251.1;Parent=gene-CJ235_00850;Dbxref=NCBI_GP:PMC20251.1;Name=PMC20251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13273.4;locus_tag=CJ235_00850;product=DUF4064 domain-containing protein;protein_id=PMC20251.1;transl_table=11 PNGG01000001.1 Genbank gene 159749 161089 . + . ID=gene-CJ235_00855;Name=CJ235_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00855 PNGG01000001.1 Protein Homology CDS 159749 161089 . + 0 ID=cds-PMC20252.1;Parent=gene-CJ235_00855;Dbxref=NCBI_GP:PMC20252.1;Name=PMC20252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303408.1;locus_tag=CJ235_00855;product=divalent metal cation transporter;protein_id=PMC20252.1;transl_table=11 PNGG01000001.1 Genbank gene 161196 162281 . - . ID=gene-CJ235_00860;Name=CJ235_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00860 PNGG01000001.1 Protein Homology CDS 161196 162281 . - 0 ID=cds-PMC20253.1;Parent=gene-CJ235_00860;Dbxref=NCBI_GP:PMC20253.1;Name=PMC20253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471921.1;locus_tag=CJ235_00860;product=hypothetical protein;protein_id=PMC20253.1;transl_table=11 PNGG01000001.1 Genbank gene 162543 163613 . - . ID=gene-CJ235_00865;Name=CJ235_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00865 PNGG01000001.1 Protein Homology CDS 162543 163613 . - 0 ID=cds-PMC20254.1;Parent=gene-CJ235_00865;Dbxref=NCBI_GP:PMC20254.1;Name=PMC20254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452961.1;locus_tag=CJ235_00865;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=PMC20254.1;transl_table=11 PNGG01000001.1 Genbank gene 163610 164416 . - . ID=gene-CJ235_00870;Name=CJ235_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00870 PNGG01000001.1 Protein Homology CDS 163610 164416 . - 0 ID=cds-PMC20255.1;Parent=gene-CJ235_00870;Dbxref=NCBI_GP:PMC20255.1;Name=PMC20255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471875.1;locus_tag=CJ235_00870;product=ABC transporter permease;protein_id=PMC20255.1;transl_table=11 PNGG01000001.1 Genbank gene 164422 165225 . - . ID=gene-CJ235_00875;Name=CJ235_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00875 PNGG01000001.1 Protein Homology CDS 164422 165225 . - 0 ID=cds-PMC20256.1;Parent=gene-CJ235_00875;Dbxref=NCBI_GP:PMC20256.1;Name=PMC20256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175745.1;locus_tag=CJ235_00875;product=ABC transporter permease;protein_id=PMC20256.1;transl_table=11 PNGG01000001.1 Genbank gene 165209 166312 . - . ID=gene-CJ235_00880;Name=CJ235_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00880 PNGG01000001.1 Protein Homology CDS 165209 166312 . - 0 ID=cds-PMC20257.1;Parent=gene-CJ235_00880;Dbxref=NCBI_GP:PMC20257.1;Name=PMC20257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533325.1;locus_tag=CJ235_00880;product=spermidine/putrescine ABC transporter ATP-binding protein;protein_id=PMC20257.1;transl_table=11 PNGG01000001.1 Genbank gene 166320 166856 . - . ID=gene-CJ235_00885;Name=CJ235_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00885 PNGG01000001.1 Protein Homology CDS 166320 166856 . - 0 ID=cds-PMC20258.1;Parent=gene-CJ235_00885;Dbxref=NCBI_GP:PMC20258.1;Name=PMC20258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471914.1;locus_tag=CJ235_00885;product=XRE family transcriptional regulator;protein_id=PMC20258.1;transl_table=11 PNGG01000001.1 Genbank gene 166972 167244 . - . ID=gene-CJ235_00890;Name=CJ235_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00890 PNGG01000001.1 Protein Homology CDS 166972 167244 . - 0 ID=cds-PMC20259.1;Parent=gene-CJ235_00890;Dbxref=NCBI_GP:PMC20259.1;Name=PMC20259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471936.1;locus_tag=CJ235_00890;product=hypothetical protein;protein_id=PMC20259.1;transl_table=11 PNGG01000001.1 Genbank gene 167432 168838 . - . ID=gene-CJ235_00895;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CJ235_00895 PNGG01000001.1 Protein Homology CDS 167432 168838 . - 0 ID=cds-PMC20260.1;Parent=gene-CJ235_00895;Dbxref=NCBI_GP:PMC20260.1;Name=PMC20260.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CJ235_00895;product=dihydrolipoyl dehydrogenase;protein_id=PMC20260.1;transl_table=11 PNGG01000001.1 Genbank gene 168842 170155 . - . ID=gene-CJ235_00900;Name=CJ235_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00900 PNGG01000001.1 Protein Homology CDS 168842 170155 . - 0 ID=cds-PMC20261.1;Parent=gene-CJ235_00900;Dbxref=NCBI_GP:PMC20261.1;Name=PMC20261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491582.1;locus_tag=CJ235_00900;product=2-oxo acid dehydrogenase subunit E2;protein_id=PMC20261.1;transl_table=11 PNGG01000001.1 Genbank gene 170303 171280 . - . ID=gene-CJ235_00905;Name=CJ235_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00905 PNGG01000001.1 Protein Homology CDS 170303 171280 . - 0 ID=cds-PMC20262.1;Parent=gene-CJ235_00905;Dbxref=NCBI_GP:PMC20262.1;Name=PMC20262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CJ235_00905;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=PMC20262.1;transl_table=11 PNGG01000001.1 Genbank gene 171284 172396 . - . ID=gene-CJ235_00910;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CJ235_00910 PNGG01000001.1 Protein Homology CDS 171284 172396 . - 0 ID=cds-PMC20263.1;Parent=gene-CJ235_00910;Dbxref=NCBI_GP:PMC20263.1;Name=PMC20263.1;gbkey=CDS;gene=pdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CJ235_00910;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=PMC20263.1;transl_table=11 PNGG01000001.1 Genbank gene 172678 173307 . - . ID=gene-CJ235_00915;Name=CJ235_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00915 PNGG01000001.1 Protein Homology CDS 172678 173307 . - 0 ID=cds-PMC20264.1;Parent=gene-CJ235_00915;Dbxref=NCBI_GP:PMC20264.1;Name=PMC20264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10368.7;locus_tag=CJ235_00915;product=hypothetical protein;protein_id=PMC20264.1;transl_table=11 PNGG01000001.1 Genbank gene 173433 173984 . + . ID=gene-CJ235_00920;Name=CJ235_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00920 PNGG01000001.1 Protein Homology CDS 173433 173984 . + 0 ID=cds-PMC20265.1;Parent=gene-CJ235_00920;Dbxref=NCBI_GP:PMC20265.1;Name=PMC20265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365193.1;locus_tag=CJ235_00920;product=peptide deformylase;protein_id=PMC20265.1;transl_table=11 PNGG01000001.1 Genbank gene 174074 174442 . - . ID=gene-CJ235_00925;Name=CJ235_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00925 PNGG01000001.1 Protein Homology CDS 174074 174442 . - 0 ID=cds-PMC20266.1;Parent=gene-CJ235_00925;Dbxref=NCBI_GP:PMC20266.1;Name=PMC20266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471925.1;locus_tag=CJ235_00925;product=hypothetical protein;protein_id=PMC20266.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 174682 176065 . + . ID=gene-CJ235_00930;Name=CJ235_00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_00930;pseudo=true PNGG01000001.1 Protein Homology CDS 174682 176065 . + 0 ID=cds-CJ235_00930;Parent=gene-CJ235_00930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471872.1;locus_tag=CJ235_00930;product=gamma-aminobutyrate permease;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 176739 176954 . + . ID=gene-CJ235_00935;Name=CJ235_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00935 PNGG01000001.1 Protein Homology CDS 176739 176954 . + 0 ID=cds-PMC20267.1;Parent=gene-CJ235_00935;Dbxref=NCBI_GP:PMC20267.1;Name=PMC20267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CJ235_00935;product=hypothetical protein;protein_id=PMC20267.1;transl_table=11 PNGG01000001.1 Genbank gene 176954 178720 . + . ID=gene-CJ235_00940;Name=CJ235_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00940 PNGG01000001.1 Protein Homology CDS 176954 178720 . + 0 ID=cds-PMC20268.1;Parent=gene-CJ235_00940;Dbxref=NCBI_GP:PMC20268.1;Name=PMC20268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471893.1;locus_tag=CJ235_00940;product=ribonuclease J;protein_id=PMC20268.1;transl_table=11 PNGG01000001.1 Genbank gene 178776 179438 . - . ID=gene-CJ235_00945;Name=CJ235_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00945 PNGG01000001.1 Protein Homology CDS 178776 179438 . - 0 ID=cds-PMC20269.1;Parent=gene-CJ235_00945;Dbxref=NCBI_GP:PMC20269.1;Name=PMC20269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465247.1;locus_tag=CJ235_00945;product=TrkA family potassium uptake protein;protein_id=PMC20269.1;transl_table=11 PNGG01000001.1 Genbank gene 179554 180570 . - . ID=gene-CJ235_00950;Name=CJ235_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00950 PNGG01000001.1 Protein Homology CDS 179554 180570 . - 0 ID=cds-PMC20270.1;Parent=gene-CJ235_00950;Dbxref=NCBI_GP:PMC20270.1;Name=PMC20270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471862.1;locus_tag=CJ235_00950;product=cytochrome D ubiquinol oxidase subunit II;protein_id=PMC20270.1;transl_table=11 PNGG01000001.1 Genbank gene 180570 181922 . - . ID=gene-CJ235_00955;Name=CJ235_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00955 PNGG01000001.1 Protein Homology CDS 180570 181922 . - 0 ID=cds-PMC20271.1;Parent=gene-CJ235_00955;Dbxref=NCBI_GP:PMC20271.1;Name=PMC20271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471859.1;locus_tag=CJ235_00955;product=cytochrome ubiquinol oxidase subunit I;protein_id=PMC20271.1;transl_table=11 PNGG01000001.1 Genbank gene 182124 182354 . + . ID=gene-CJ235_00960;Name=CJ235_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00960 PNGG01000001.1 Protein Homology CDS 182124 182354 . + 0 ID=cds-PMC20272.1;Parent=gene-CJ235_00960;Dbxref=NCBI_GP:PMC20272.1;Name=PMC20272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471912.1;locus_tag=CJ235_00960;product=glutaredoxin family protein;protein_id=PMC20272.1;transl_table=11 PNGG01000001.1 Genbank gene 182609 184324 . - . ID=gene-CJ235_00965;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CJ235_00965 PNGG01000001.1 Protein Homology CDS 182609 184324 . - 0 ID=cds-PMC20273.1;Parent=gene-CJ235_00965;Dbxref=NCBI_GP:PMC20273.1;Name=PMC20273.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442135.1;locus_tag=CJ235_00965;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=PMC20273.1;transl_table=11 PNGG01000001.1 Genbank gene 184326 184592 . - . ID=gene-CJ235_00970;Name=CJ235_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00970 PNGG01000001.1 Protein Homology CDS 184326 184592 . - 0 ID=cds-PMC20274.1;Parent=gene-CJ235_00970;Dbxref=NCBI_GP:PMC20274.1;Name=PMC20274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614262.1;locus_tag=CJ235_00970;product=phosphocarrier protein HPr;protein_id=PMC20274.1;transl_table=11 PNGG01000001.1 Genbank gene 184754 185296 . - . ID=gene-CJ235_00975;Name=CJ235_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00975 PNGG01000001.1 Protein Homology CDS 184754 185296 . - 0 ID=cds-PMC20275.1;Parent=gene-CJ235_00975;Dbxref=NCBI_GP:PMC20275.1;Name=PMC20275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471870.1;locus_tag=CJ235_00975;product=DUF697 domain-containing protein;protein_id=PMC20275.1;transl_table=11 PNGG01000001.1 Genbank gene 185355 186524 . - . ID=gene-CJ235_00980;Name=CJ235_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00980 PNGG01000001.1 Protein Homology CDS 185355 186524 . - 0 ID=cds-PMC20276.1;Parent=gene-CJ235_00980;Dbxref=NCBI_GP:PMC20276.1;Name=PMC20276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499575.1;locus_tag=CJ235_00980;product=class I SAM-dependent rRNA methyltransferase;protein_id=PMC20276.1;transl_table=11 PNGG01000001.1 Genbank gene 186825 188159 . - . ID=gene-CJ235_00985;Name=CJ235_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00985 PNGG01000001.1 Protein Homology CDS 186825 188159 . - 0 ID=cds-PMC20277.1;Parent=gene-CJ235_00985;Dbxref=NCBI_GP:PMC20277.1;Name=PMC20277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508018.1;locus_tag=CJ235_00985;product=hypothetical protein;protein_id=PMC20277.1;transl_table=11 PNGG01000001.1 cmsearch riboswitch 189051 189155 . + . ID=id-PNGG01000001.1:189051..189155;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000001.1 Genbank gene 189275 189859 . + . ID=gene-CJ235_00990;Name=CJ235_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00990 PNGG01000001.1 Protein Homology CDS 189275 189859 . + 0 ID=cds-PMC20278.1;Parent=gene-CJ235_00990;Dbxref=NCBI_GP:PMC20278.1;Name=PMC20278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471873.1;locus_tag=CJ235_00990;product=thiamine ABC transporter permease;protein_id=PMC20278.1;transl_table=11 PNGG01000001.1 Genbank gene 189872 191281 . + . ID=gene-CJ235_00995;Name=CJ235_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_00995 PNGG01000001.1 Protein Homology CDS 189872 191281 . + 0 ID=cds-PMC20279.1;Parent=gene-CJ235_00995;Dbxref=NCBI_GP:PMC20279.1;Name=PMC20279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276154.1;locus_tag=CJ235_00995;product=ABC transporter ATP-binding protein;protein_id=PMC20279.1;transl_table=11 PNGG01000001.1 Genbank gene 191274 192077 . + . ID=gene-CJ235_01000;Name=CJ235_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01000 PNGG01000001.1 Protein Homology CDS 191274 192077 . + 0 ID=cds-PMC20280.1;Parent=gene-CJ235_01000;Dbxref=NCBI_GP:PMC20280.1;Name=PMC20280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471867.1;locus_tag=CJ235_01000;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=PMC20280.1;transl_table=11 PNGG01000001.1 Genbank gene 192318 193559 . - . ID=gene-CJ235_01005;Name=CJ235_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01005 PNGG01000001.1 Protein Homology CDS 192318 193559 . - 0 ID=cds-PMC20281.1;Parent=gene-CJ235_01005;Dbxref=NCBI_GP:PMC20281.1;Name=PMC20281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899950.1;locus_tag=CJ235_01005;product=phosphoribosylamine--glycine ligase;protein_id=PMC20281.1;transl_table=11 PNGG01000001.1 Genbank gene 193583 195061 . - . ID=gene-CJ235_01010;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CJ235_01010 PNGG01000001.1 Protein Homology CDS 193583 195061 . - 0 ID=cds-PMC20282.1;Parent=gene-CJ235_01010;Dbxref=NCBI_GP:PMC20282.1;Name=PMC20282.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764326.1;locus_tag=CJ235_01010;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=PMC20282.1;transl_table=11 PNGG01000001.1 Genbank gene 195080 195646 . - . ID=gene-CJ235_01015;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CJ235_01015 PNGG01000001.1 Protein Homology CDS 195080 195646 . - 0 ID=cds-PMC20283.1;Parent=gene-CJ235_01015;Dbxref=NCBI_GP:PMC20283.1;Name=PMC20283.1;gbkey=CDS;gene=purN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508026.1;locus_tag=CJ235_01015;product=phosphoribosylglycinamide formyltransferase;protein_id=PMC20283.1;transl_table=11 PNGG01000001.1 Genbank gene 195650 196678 . - . ID=gene-CJ235_01020;Name=CJ235_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01020 PNGG01000001.1 Protein Homology CDS 195650 196678 . - 0 ID=cds-PMC20284.1;Parent=gene-CJ235_01020;Dbxref=NCBI_GP:PMC20284.1;Name=PMC20284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383672.1;locus_tag=CJ235_01020;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=PMC20284.1;transl_table=11 PNGG01000001.1 Genbank gene 196671 198158 . - . ID=gene-CJ235_01025;Name=CJ235_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01025 PNGG01000001.1 Protein Homology CDS 196671 198158 . - 0 ID=cds-PMC20285.1;Parent=gene-CJ235_01025;Dbxref=NCBI_GP:PMC20285.1;Name=PMC20285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499564.1;locus_tag=CJ235_01025;product=amidophosphoribosyltransferase;protein_id=PMC20285.1;transl_table=11 PNGG01000001.1 Genbank gene 198137 200326 . - . ID=gene-CJ235_01030;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CJ235_01030 PNGG01000001.1 Protein Homology CDS 198137 200326 . - 0 ID=cds-PMC20286.1;Parent=gene-CJ235_01030;Dbxref=NCBI_GP:PMC20286.1;Name=PMC20286.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764322.1;locus_tag=CJ235_01030;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=PMC20286.1;transl_table=11 PNGG01000001.1 Genbank gene 200319 200990 . - . ID=gene-CJ235_01035;Name=CJ235_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01035 PNGG01000001.1 Protein Homology CDS 200319 200990 . - 0 ID=cds-PMC20287.1;Parent=gene-CJ235_01035;Dbxref=NCBI_GP:PMC20287.1;Name=PMC20287.1;Note=With PurL and PurS catalyzes the conversion of formylglycinamide ribonucleotide%2C ATP%2C and glutamine to formylglycinamidine ribonucleotide%2C ADP%2C and glutamate in the fourth step of the purine biosynthetic pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=CJ235_01035;product=phosphoribosylformylglycinamidine synthase I;protein_id=PMC20287.1;transl_table=11 PNGG01000001.1 Genbank gene 200990 201250 . - . ID=gene-CJ235_01040;Name=CJ235_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01040 PNGG01000001.1 Protein Homology CDS 200990 201250 . - 0 ID=cds-PMC20288.1;Parent=gene-CJ235_01040;Dbxref=NCBI_GP:PMC20288.1;Name=PMC20288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448160.1;locus_tag=CJ235_01040;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=PMC20288.1;transl_table=11 PNGG01000001.1 Genbank gene 201250 201954 . - . ID=gene-CJ235_01045;Name=CJ235_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01045 PNGG01000001.1 Protein Homology CDS 201250 201954 . - 0 ID=cds-PMC20289.1;Parent=gene-CJ235_01045;Dbxref=NCBI_GP:PMC20289.1;Name=PMC20289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175771.1;locus_tag=CJ235_01045;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=PMC20289.1;transl_table=11 PNGG01000001.1 Genbank gene 201954 203081 . - . ID=gene-CJ235_01050;Name=CJ235_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01050 PNGG01000001.1 Protein Homology CDS 201954 203081 . - 0 ID=cds-PMC20290.1;Parent=gene-CJ235_01050;Dbxref=NCBI_GP:PMC20290.1;Name=PMC20290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764318.1;locus_tag=CJ235_01050;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=PMC20290.1;transl_table=11 PNGG01000001.1 Genbank gene 203068 203550 . - . ID=gene-CJ235_01055;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CJ235_01055 PNGG01000001.1 Protein Homology CDS 203068 203550 . - 0 ID=cds-PMC20291.1;Parent=gene-CJ235_01055;Dbxref=NCBI_GP:PMC20291.1;Name=PMC20291.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764317.1;locus_tag=CJ235_01055;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=PMC20291.1;transl_table=11 PNGG01000001.1 Genbank gene 203758 204615 . + . ID=gene-CJ235_01060;Name=CJ235_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01060 PNGG01000001.1 Protein Homology CDS 203758 204615 . + 0 ID=cds-PMC20292.1;Parent=gene-CJ235_01060;Dbxref=NCBI_GP:PMC20292.1;Name=PMC20292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176610.1;locus_tag=CJ235_01060;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=PMC20292.1;transl_table=11 PNGG01000001.1 Genbank gene 205133 205450 . + . ID=gene-CJ235_01065;Name=CJ235_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01065 PNGG01000001.1 Protein Homology CDS 205133 205450 . + 0 ID=cds-PMC20293.1;Parent=gene-CJ235_01065;Dbxref=NCBI_GP:PMC20293.1;Name=PMC20293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471880.1;locus_tag=CJ235_01065;product=DUF5011 domain-containing protein;protein_id=PMC20293.1;transl_table=11 PNGG01000001.1 Genbank gene 205795 206919 . + . ID=gene-CJ235_01070;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CJ235_01070 PNGG01000001.1 Protein Homology CDS 205795 206919 . + 0 ID=cds-PMC20294.1;Parent=gene-CJ235_01070;Dbxref=NCBI_GP:PMC20294.1;Name=PMC20294.1;gbkey=CDS;gene=qoxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764314.1;locus_tag=CJ235_01070;product=cytochrome o ubiquinol oxidase subunit II;protein_id=PMC20294.1;transl_table=11 PNGG01000001.1 Genbank gene 206919 208907 . + . ID=gene-CJ235_01075;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CJ235_01075 PNGG01000001.1 Protein Homology CDS 206919 208907 . + 0 ID=cds-PMC20295.1;Parent=gene-CJ235_01075;Dbxref=NCBI_GP:PMC20295.1;Name=PMC20295.1;gbkey=CDS;gene=qoxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CJ235_01075;product=cytochrome aa3 quinol oxidase subunit I;protein_id=PMC20295.1;transl_table=11 PNGG01000001.1 Genbank gene 208897 209502 . + . ID=gene-CJ235_01080;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CJ235_01080 PNGG01000001.1 Protein Homology CDS 208897 209502 . + 0 ID=cds-PMC20296.1;Parent=gene-CJ235_01080;Dbxref=NCBI_GP:PMC20296.1;Name=PMC20296.1;gbkey=CDS;gene=qoxC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CJ235_01080;product=cytochrome aa3 quinol oxidase subunit III;protein_id=PMC20296.1;transl_table=11 PNGG01000001.1 Genbank gene 209499 209789 . + . ID=gene-CJ235_01085;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CJ235_01085 PNGG01000001.1 Protein Homology CDS 209499 209789 . + 0 ID=cds-PMC20297.1;Parent=gene-CJ235_01085;Dbxref=NCBI_GP:PMC20297.1;Name=PMC20297.1;gbkey=CDS;gene=qoxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764311.1;locus_tag=CJ235_01085;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=PMC20297.1;transl_table=11 PNGG01000001.1 Genbank gene 209935 210843 . + . ID=gene-CJ235_01090;Name=CJ235_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01090 PNGG01000001.1 Protein Homology CDS 209935 210843 . + 0 ID=cds-PMC20803.1;Parent=gene-CJ235_01090;Dbxref=NCBI_GP:PMC20803.1;Name=PMC20803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508042.1;locus_tag=CJ235_01090;product=ribonucleoside hydrolase RihC;protein_id=PMC20803.1;transl_table=11 PNGG01000001.1 Genbank gene 210957 212609 . - . ID=gene-CJ235_01095;Name=CJ235_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01095 PNGG01000001.1 Protein Homology CDS 210957 212609 . - 0 ID=cds-PMC20298.1;Parent=gene-CJ235_01095;Dbxref=NCBI_GP:PMC20298.1;Name=PMC20298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471941.1;locus_tag=CJ235_01095;product=phospho-sugar mutase;protein_id=PMC20298.1;transl_table=11 PNGG01000001.1 Genbank gene 213166 214431 . + . ID=gene-CJ235_01100;Name=CJ235_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01100 PNGG01000001.1 Protein Homology CDS 213166 214431 . + 0 ID=cds-PMC20299.1;Parent=gene-CJ235_01100;Dbxref=NCBI_GP:PMC20299.1;Name=PMC20299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471935.1;locus_tag=CJ235_01100;product=hypothetical protein;protein_id=PMC20299.1;transl_table=11 PNGG01000001.1 Genbank gene 214453 214923 . + . ID=gene-CJ235_01105;Name=CJ235_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01105 PNGG01000001.1 Protein Homology CDS 214453 214923 . + 0 ID=cds-PMC20300.1;Parent=gene-CJ235_01105;Dbxref=NCBI_GP:PMC20300.1;Name=PMC20300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471869.1;locus_tag=CJ235_01105;product=DUF2538 domain-containing protein;protein_id=PMC20300.1;transl_table=11 PNGG01000001.1 Genbank gene 214979 215581 . - . ID=gene-CJ235_01110;Name=CJ235_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01110 PNGG01000001.1 Protein Homology CDS 214979 215581 . - 0 ID=cds-PMC20301.1;Parent=gene-CJ235_01110;Dbxref=NCBI_GP:PMC20301.1;Name=PMC20301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471919.1;locus_tag=CJ235_01110;product=DNA-binding response regulator;protein_id=PMC20301.1;transl_table=11 PNGG01000001.1 Genbank gene 215578 216666 . - . ID=gene-CJ235_01115;Name=CJ235_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01115 PNGG01000001.1 Protein Homology CDS 215578 216666 . - 0 ID=cds-PMC20302.1;Parent=gene-CJ235_01115;Dbxref=NCBI_GP:PMC20302.1;Name=PMC20302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470020.1;locus_tag=CJ235_01115;product=sensor histidine kinase;protein_id=PMC20302.1;transl_table=11 PNGG01000001.1 Genbank gene 216663 217397 . - . ID=gene-CJ235_01120;Name=CJ235_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01120 PNGG01000001.1 Protein Homology CDS 216663 217397 . - 0 ID=cds-PMC20303.1;Parent=gene-CJ235_01120;Dbxref=NCBI_GP:PMC20303.1;Name=PMC20303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459228.1;locus_tag=CJ235_01120;product=ABC transporter permease;protein_id=PMC20303.1;transl_table=11 PNGG01000001.1 Genbank gene 217394 218260 . - . ID=gene-CJ235_01125;Name=CJ235_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01125 PNGG01000001.1 Protein Homology CDS 217394 218260 . - 0 ID=cds-PMC20304.1;Parent=gene-CJ235_01125;Dbxref=NCBI_GP:PMC20304.1;Name=PMC20304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471897.1;locus_tag=CJ235_01125;product=ABC transporter ATP-binding protein;protein_id=PMC20304.1;transl_table=11 PNGG01000001.1 Genbank gene 218432 218854 . + . ID=gene-CJ235_01130;Name=CJ235_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01130 PNGG01000001.1 Protein Homology CDS 218432 218854 . + 0 ID=cds-PMC20305.1;Parent=gene-CJ235_01130;Dbxref=NCBI_GP:PMC20305.1;Name=PMC20305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276181.1;locus_tag=CJ235_01130;product=GNAT family N-acetyltransferase;protein_id=PMC20305.1;transl_table=11 PNGG01000001.1 Genbank gene 219062 223465 . + . ID=gene-CJ235_01135;Name=CJ235_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01135 PNGG01000001.1 Protein Homology CDS 219062 223465 . + 0 ID=cds-PMC20306.1;Parent=gene-CJ235_01135;Dbxref=NCBI_GP:PMC20306.1;Name=PMC20306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471933.1;locus_tag=CJ235_01135;product=autolysin;protein_id=PMC20306.1;transl_table=11 PNGG01000001.1 Genbank gene 223673 224101 . - . ID=gene-CJ235_01140;Name=CJ235_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01140 PNGG01000001.1 Protein Homology CDS 223673 224101 . - 0 ID=cds-PMC20307.1;Parent=gene-CJ235_01140;Dbxref=NCBI_GP:PMC20307.1;Name=PMC20307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471900.1;locus_tag=CJ235_01140;product=MarR family transcriptional regulator;protein_id=PMC20307.1;transl_table=11 PNGG01000001.1 Genbank gene 224373 225383 . + . ID=gene-CJ235_01145;Name=CJ235_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01145 PNGG01000001.1 Protein Homology CDS 224373 225383 . + 0 ID=cds-PMC20308.1;Parent=gene-CJ235_01145;Dbxref=NCBI_GP:PMC20308.1;Name=PMC20308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480461.1;locus_tag=CJ235_01145;product=acyltransferase;protein_id=PMC20308.1;transl_table=11 PNGG01000001.1 Genbank gene 225486 226649 . + . ID=gene-CJ235_01150;Name=CJ235_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01150 PNGG01000001.1 Protein Homology CDS 225486 226649 . + 0 ID=cds-PMC20309.1;Parent=gene-CJ235_01150;Dbxref=NCBI_GP:PMC20309.1;Name=PMC20309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471911.1;locus_tag=CJ235_01150;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=PMC20309.1;transl_table=11 PNGG01000001.1 Genbank gene 226700 227149 . - . ID=gene-CJ235_01155;Name=CJ235_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01155 PNGG01000001.1 Protein Homology CDS 226700 227149 . - 0 ID=cds-PMC20310.1;Parent=gene-CJ235_01155;Dbxref=NCBI_GP:PMC20310.1;Name=PMC20310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510124.1;locus_tag=CJ235_01155;product=MarR family transcriptional regulator;protein_id=PMC20310.1;transl_table=11 PNGG01000001.1 Genbank gene 227378 228196 . - . ID=gene-CJ235_01160;Name=CJ235_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01160 PNGG01000001.1 Protein Homology CDS 227378 228196 . - 0 ID=cds-PMC20311.1;Parent=gene-CJ235_01160;Dbxref=NCBI_GP:PMC20311.1;Name=PMC20311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CJ235_01160;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=PMC20311.1;transl_table=11 PNGG01000001.1 Genbank gene 228189 228995 . - . ID=gene-CJ235_01165;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CJ235_01165 PNGG01000001.1 Protein Homology CDS 228189 228995 . - 0 ID=cds-PMC20312.1;Parent=gene-CJ235_01165;Dbxref=NCBI_GP:PMC20312.1;Name=PMC20312.1;gbkey=CDS;gene=menH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471899.1;locus_tag=CJ235_01165;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=PMC20312.1;transl_table=11 PNGG01000001.1 Genbank gene 228982 230661 . - . ID=gene-CJ235_01170;Name=CJ235_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01170 PNGG01000001.1 Protein Homology CDS 228982 230661 . - 0 ID=cds-PMC20313.1;Parent=gene-CJ235_01170;Dbxref=NCBI_GP:PMC20313.1;Name=PMC20313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833068.1;locus_tag=CJ235_01170;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=PMC20313.1;transl_table=11 PNGG01000001.1 Genbank gene 230654 232006 . - . ID=gene-CJ235_01175;Name=CJ235_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01175 PNGG01000001.1 Protein Homology CDS 230654 232006 . - 0 ID=cds-PMC20314.1;Parent=gene-CJ235_01175;Dbxref=NCBI_GP:PMC20314.1;Name=PMC20314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471917.1;locus_tag=CJ235_01175;product=isochorismate synthase;protein_id=PMC20314.1;transl_table=11 PNGG01000001.1 Genbank gene 232190 233128 . + . ID=gene-CJ235_01180;Name=CJ235_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01180 PNGG01000001.1 Protein Homology CDS 232190 233128 . + 0 ID=cds-PMC20315.1;Parent=gene-CJ235_01180;Dbxref=NCBI_GP:PMC20315.1;Name=PMC20315.1;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764296.1;locus_tag=CJ235_01180;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=PMC20315.1;transl_table=11 PNGG01000001.1 Genbank gene 233290 233877 . - . ID=gene-CJ235_01185;Name=CJ235_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01185 PNGG01000001.1 Protein Homology CDS 233290 233877 . - 0 ID=cds-PMC20316.1;Parent=gene-CJ235_01185;Dbxref=NCBI_GP:PMC20316.1;Name=PMC20316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471910.1;locus_tag=CJ235_01185;product=N-acetyltransferase;protein_id=PMC20316.1;transl_table=11 PNGG01000001.1 Genbank gene 233985 234557 . - . ID=gene-CJ235_01190;Name=CJ235_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01190 PNGG01000001.1 Protein Homology CDS 233985 234557 . - 0 ID=cds-PMC20317.1;Parent=gene-CJ235_01190;Dbxref=NCBI_GP:PMC20317.1;Name=PMC20317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471874.1;locus_tag=CJ235_01190;product=N-acetylmuramoyl-L-alanine amidase;protein_id=PMC20317.1;transl_table=11 PNGG01000001.1 Genbank gene 234538 234939 . - . ID=gene-CJ235_01195;Name=CJ235_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01195 PNGG01000001.1 Protein Homology CDS 234538 234939 . - 0 ID=cds-PMC20318.1;Parent=gene-CJ235_01195;Dbxref=NCBI_GP:PMC20318.1;Name=PMC20318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471908.1;locus_tag=CJ235_01195;product=holin;protein_id=PMC20318.1;transl_table=11 PNGG01000001.1 Genbank gene 235243 236328 . + . ID=gene-CJ235_01200;Name=CJ235_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01200 PNGG01000001.1 GeneMarkS+ CDS 235243 236328 . + 0 ID=cds-PMC20319.1;Parent=gene-CJ235_01200;Dbxref=NCBI_GP:PMC20319.1;Name=PMC20319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01200;product=hypothetical protein;protein_id=PMC20319.1;transl_table=11 PNGG01000001.1 Genbank gene 236507 237109 . - . ID=gene-CJ235_01205;Name=CJ235_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01205 PNGG01000001.1 Protein Homology CDS 236507 237109 . - 0 ID=cds-PMC20320.1;Parent=gene-CJ235_01205;Dbxref=NCBI_GP:PMC20320.1;Name=PMC20320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499518.1;locus_tag=CJ235_01205;product=CPBP family intramembrane metalloprotease;protein_id=PMC20320.1;transl_table=11 PNGG01000001.1 Genbank gene 237114 237299 . - . ID=gene-CJ235_01210;Name=CJ235_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01210 PNGG01000001.1 Protein Homology CDS 237114 237299 . - 0 ID=cds-PMC20321.1;Parent=gene-CJ235_01210;Dbxref=NCBI_GP:PMC20321.1;Name=PMC20321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764282.1;locus_tag=CJ235_01210;product=DUF2187 domain-containing protein;protein_id=PMC20321.1;transl_table=11 PNGG01000001.1 Genbank gene 237587 238576 . + . ID=gene-CJ235_01215;Name=CJ235_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01215 PNGG01000001.1 Protein Homology CDS 237587 238576 . + 0 ID=cds-PMC20322.1;Parent=gene-CJ235_01215;Dbxref=NCBI_GP:PMC20322.1;Name=PMC20322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471863.1;locus_tag=CJ235_01215;product=lipoate--protein ligase;protein_id=PMC20322.1;transl_table=11 PNGG01000001.1 Genbank gene 238663 238881 . - . ID=gene-CJ235_01220;Name=CJ235_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01220 PNGG01000001.1 Protein Homology CDS 238663 238881 . - 0 ID=cds-PMC20323.1;Parent=gene-CJ235_01220;Dbxref=NCBI_GP:PMC20323.1;Name=PMC20323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303465.1;locus_tag=CJ235_01220;product=IDEAL domain-containing protein;protein_id=PMC20323.1;transl_table=11 PNGG01000001.1 Genbank gene 239158 239727 . + . ID=gene-CJ235_01225;Name=CJ235_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01225 PNGG01000001.1 Protein Homology CDS 239158 239727 . + 0 ID=cds-PMC20804.1;Parent=gene-CJ235_01225;Dbxref=NCBI_GP:PMC20804.1;Name=PMC20804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508070.1;locus_tag=CJ235_01225;product=competence protein ComK;protein_id=PMC20804.1;transl_table=11 PNGG01000001.1 Genbank gene 239960 240034 . + . ID=gene-CJ235_01230;Name=CJ235_01230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_01230 PNGG01000001.1 tRNAscan-SE tRNA 239960 240034 . + . ID=rna-CJ235_01230;Parent=gene-CJ235_01230;anticodon=(pos:239992..239994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_01230;product=tRNA-Asn PNGG01000001.1 tRNAscan-SE exon 239960 240034 . + . ID=exon-CJ235_01230-1;Parent=rna-CJ235_01230;anticodon=(pos:239992..239994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_01230;product=tRNA-Asn PNGG01000001.1 Genbank gene 240038 240126 . + . ID=gene-CJ235_01235;Name=CJ235_01235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_01235 PNGG01000001.1 tRNAscan-SE tRNA 240038 240126 . + . ID=rna-CJ235_01235;Parent=gene-CJ235_01235;anticodon=(pos:240073..240075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_01235;product=tRNA-Ser PNGG01000001.1 tRNAscan-SE exon 240038 240126 . + . ID=exon-CJ235_01235-1;Parent=rna-CJ235_01235;anticodon=(pos:240073..240075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_01235;product=tRNA-Ser PNGG01000001.1 Genbank gene 240720 240917 . - . ID=gene-CJ235_01240;Name=CJ235_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01240 PNGG01000001.1 Protein Homology CDS 240720 240917 . - 0 ID=cds-PMC20324.1;Parent=gene-CJ235_01240;Dbxref=NCBI_GP:PMC20324.1;Name=PMC20324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006112.1;locus_tag=CJ235_01240;product=hypothetical protein;protein_id=PMC20324.1;transl_table=11 PNGG01000001.1 Genbank gene 241501 242235 . - . ID=gene-CJ235_01245;Name=CJ235_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01245 PNGG01000001.1 Protein Homology CDS 241501 242235 . - 0 ID=cds-PMC20325.1;Parent=gene-CJ235_01245;Dbxref=NCBI_GP:PMC20325.1;Name=PMC20325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765024.1;locus_tag=CJ235_01245;product=hypothetical protein;protein_id=PMC20325.1;transl_table=11 PNGG01000001.1 Genbank gene 242525 244036 . - . ID=gene-CJ235_01250;Name=CJ235_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01250 PNGG01000001.1 Protein Homology CDS 242525 244036 . - 0 ID=cds-PMC20326.1;Parent=gene-CJ235_01250;Dbxref=NCBI_GP:PMC20326.1;Name=PMC20326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472260.1;locus_tag=CJ235_01250;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PMC20326.1;transl_table=11 PNGG01000001.1 Genbank gene 244212 245570 . - . ID=gene-CJ235_01255;Name=CJ235_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01255 PNGG01000001.1 Protein Homology CDS 244212 245570 . - 0 ID=cds-PMC20327.1;Parent=gene-CJ235_01255;Dbxref=NCBI_GP:PMC20327.1;Name=PMC20327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764279.1;locus_tag=CJ235_01255;product=TrkH family potassium uptake protein;protein_id=PMC20327.1;transl_table=11 PNGG01000001.1 Genbank gene 245589 247547 . - . ID=gene-CJ235_01260;Name=CJ235_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01260 PNGG01000001.1 Protein Homology CDS 245589 247547 . - 0 ID=cds-PMC20328.1;Parent=gene-CJ235_01260;Dbxref=NCBI_GP:PMC20328.1;Name=PMC20328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472244.1;locus_tag=CJ235_01260;product=serine protease;protein_id=PMC20328.1;transl_table=11 PNGG01000001.1 Genbank gene 247911 248705 . - . ID=gene-CJ235_01265;Name=CJ235_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01265 PNGG01000001.1 Protein Homology CDS 247911 248705 . - 0 ID=cds-PMC20329.1;Parent=gene-CJ235_01265;Dbxref=NCBI_GP:PMC20329.1;Name=PMC20329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455522.1;locus_tag=CJ235_01265;product=hypothetical protein;protein_id=PMC20329.1;transl_table=11 PNGG01000001.1 Genbank gene 249027 250589 . - . ID=gene-CJ235_01270;Name=CJ235_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01270 PNGG01000001.1 Protein Homology CDS 249027 250589 . - 0 ID=cds-PMC20330.1;Parent=gene-CJ235_01270;Dbxref=NCBI_GP:PMC20330.1;Name=PMC20330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764275.1;locus_tag=CJ235_01270;product=peptide chain release factor 3;protein_id=PMC20330.1;transl_table=11 PNGG01000001.1 Genbank gene 250610 250873 . - . ID=gene-CJ235_01275;Name=CJ235_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01275 PNGG01000001.1 Protein Homology CDS 250610 250873 . - 0 ID=cds-PMC20331.1;Parent=gene-CJ235_01275;Dbxref=NCBI_GP:PMC20331.1;Name=PMC20331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14166.4;locus_tag=CJ235_01275;product=hypothetical protein;protein_id=PMC20331.1;transl_table=11 PNGG01000001.1 Genbank gene 250833 252317 . - . ID=gene-CJ235_01280;Name=CJ235_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01280 PNGG01000001.1 Protein Homology CDS 250833 252317 . - 0 ID=cds-PMC20332.1;Parent=gene-CJ235_01280;Dbxref=NCBI_GP:PMC20332.1;Name=PMC20332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764273.1;locus_tag=CJ235_01280;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=PMC20332.1;transl_table=11 PNGG01000001.1 Genbank gene 252935 254110 . + . ID=gene-CJ235_01285;Name=CJ235_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01285 PNGG01000001.1 Protein Homology CDS 252935 254110 . + 0 ID=cds-PMC20333.1;Parent=gene-CJ235_01285;Dbxref=NCBI_GP:PMC20333.1;Name=PMC20333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764272.1;locus_tag=CJ235_01285;product=diglucosyl diacylglycerol synthase;protein_id=PMC20333.1;transl_table=11 PNGG01000001.1 Genbank gene 254088 255272 . + . ID=gene-CJ235_01290;Name=CJ235_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01290 PNGG01000001.1 Protein Homology CDS 254088 255272 . + 0 ID=cds-PMC20334.1;Parent=gene-CJ235_01290;Dbxref=NCBI_GP:PMC20334.1;Name=PMC20334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365213.1;locus_tag=CJ235_01290;product=MFS transporter;protein_id=PMC20334.1;transl_table=11 PNGG01000001.1 Genbank gene 255357 255869 . - . ID=gene-CJ235_01295;Name=CJ235_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01295 PNGG01000001.1 Protein Homology CDS 255357 255869 . - 0 ID=cds-PMC20335.1;Parent=gene-CJ235_01295;Dbxref=NCBI_GP:PMC20335.1;Name=PMC20335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498617.1;locus_tag=CJ235_01295;product=hypothetical protein;protein_id=PMC20335.1;transl_table=11 PNGG01000001.1 Genbank gene 255961 256707 . - . ID=gene-CJ235_01300;Name=CJ235_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01300 PNGG01000001.1 Protein Homology CDS 255961 256707 . - 0 ID=cds-PMC20336.1;Parent=gene-CJ235_01300;Dbxref=NCBI_GP:PMC20336.1;Name=PMC20336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722291.1;locus_tag=CJ235_01300;product=esterase family protein;protein_id=PMC20336.1;transl_table=11 PNGG01000001.1 Genbank gene 256794 258386 . - . ID=gene-CJ235_01305;Name=CJ235_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01305 PNGG01000001.1 Protein Homology CDS 256794 258386 . - 0 ID=cds-PMC20337.1;Parent=gene-CJ235_01305;Dbxref=NCBI_GP:PMC20337.1;Name=PMC20337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469077.1;locus_tag=CJ235_01305;product=alanine:cation symporter family protein;protein_id=PMC20337.1;transl_table=11 PNGG01000001.1 Genbank gene 258797 259882 . + . ID=gene-CJ235_01310;Name=CJ235_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01310 PNGG01000001.1 Protein Homology CDS 258797 259882 . + 0 ID=cds-PMC20338.1;Parent=gene-CJ235_01310;Dbxref=NCBI_GP:PMC20338.1;Name=PMC20338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448046.1;locus_tag=CJ235_01310;product=AI-2E family transporter;protein_id=PMC20338.1;transl_table=11 PNGG01000001.1 Genbank gene 260113 260883 . - . ID=gene-CJ235_01315;Name=CJ235_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01315 PNGG01000001.1 Protein Homology CDS 260113 260883 . - 0 ID=cds-PMC20339.1;Parent=gene-CJ235_01315;Dbxref=NCBI_GP:PMC20339.1;Name=PMC20339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=CJ235_01315;product=enoyl-[acyl-carrier-protein] reductase FabI;protein_id=PMC20339.1;transl_table=11 PNGG01000001.1 Genbank gene 261183 263021 . - . ID=gene-CJ235_01320;Name=CJ235_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01320 PNGG01000001.1 Protein Homology CDS 261183 263021 . - 0 ID=cds-PMC20340.1;Parent=gene-CJ235_01320;Dbxref=NCBI_GP:PMC20340.1;Name=PMC20340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=CJ235_01320;product=sodium:proton antiporter;protein_id=PMC20340.1;transl_table=11 PNGG01000001.1 Genbank gene 263031 264416 . - . ID=gene-CJ235_01325;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CJ235_01325 PNGG01000001.1 Protein Homology CDS 263031 264416 . - 0 ID=cds-PMC20341.1;Parent=gene-CJ235_01325;Dbxref=NCBI_GP:PMC20341.1;Name=PMC20341.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472219.1;locus_tag=CJ235_01325;product=magnesium transporter;protein_id=PMC20341.1;transl_table=11 PNGG01000001.1 Genbank gene 264442 265293 . - . ID=gene-CJ235_01330;Name=CJ235_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01330 PNGG01000001.1 Protein Homology CDS 264442 265293 . - 0 ID=cds-PMC20342.1;Parent=gene-CJ235_01330;Dbxref=NCBI_GP:PMC20342.1;Name=PMC20342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508091.1;locus_tag=CJ235_01330;product=RluA family pseudouridine synthase;protein_id=PMC20342.1;transl_table=11 PNGG01000001.1 Genbank gene 265293 266102 . - . ID=gene-CJ235_01335;Name=CJ235_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01335 PNGG01000001.1 Protein Homology CDS 265293 266102 . - 0 ID=cds-PMC20343.1;Parent=gene-CJ235_01335;Dbxref=NCBI_GP:PMC20343.1;Name=PMC20343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472235.1;locus_tag=CJ235_01335;product=NAD kinase;protein_id=PMC20343.1;transl_table=11 PNGG01000001.1 Genbank gene 266115 266750 . - . ID=gene-CJ235_01340;Name=CJ235_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01340 PNGG01000001.1 Protein Homology CDS 266115 266750 . - 0 ID=cds-PMC20344.1;Parent=gene-CJ235_01340;Dbxref=NCBI_GP:PMC20344.1;Name=PMC20344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499495.1;locus_tag=CJ235_01340;product=GTP pyrophosphokinase;protein_id=PMC20344.1;transl_table=11 PNGG01000001.1 Genbank gene 266781 267128 . - . ID=gene-CJ235_01345;Name=CJ235_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01345 PNGG01000001.1 Protein Homology CDS 266781 267128 . - 0 ID=cds-PMC20345.1;Parent=gene-CJ235_01345;Dbxref=NCBI_GP:PMC20345.1;Name=PMC20345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722300.1;locus_tag=CJ235_01345;product=hypothetical protein;protein_id=PMC20345.1;transl_table=11 PNGG01000001.1 Genbank gene 267413 267994 . + . ID=gene-CJ235_01350;Name=CJ235_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01350 PNGG01000001.1 Protein Homology CDS 267413 267994 . + 0 ID=cds-PMC20346.1;Parent=gene-CJ235_01350;Dbxref=NCBI_GP:PMC20346.1;Name=PMC20346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472264.1;locus_tag=CJ235_01350;product=CYTH domain-containing protein;protein_id=PMC20346.1;transl_table=11 PNGG01000001.1 Genbank gene 268112 268501 . + . ID=gene-CJ235_01355;Name=CJ235_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01355 PNGG01000001.1 Protein Homology CDS 268112 268501 . + 0 ID=cds-PMC20805.1;Parent=gene-CJ235_01355;Dbxref=NCBI_GP:PMC20805.1;Name=PMC20805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433470.1;locus_tag=CJ235_01355;product=globin;protein_id=PMC20805.1;transl_table=11 PNGG01000001.1 Genbank gene 268518 269306 . + . ID=gene-CJ235_01360;Name=CJ235_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01360 PNGG01000001.1 Protein Homology CDS 268518 269306 . + 0 ID=cds-PMC20347.1;Parent=gene-CJ235_01360;Dbxref=NCBI_GP:PMC20347.1;Name=PMC20347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503942.1;locus_tag=CJ235_01360;product=hypothetical protein;protein_id=PMC20347.1;transl_table=11 PNGG01000001.1 Genbank gene 269872 271680 . - . ID=gene-CJ235_01365;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CJ235_01365 PNGG01000001.1 Protein Homology CDS 269872 271680 . - 0 ID=cds-PMC20348.1;Parent=gene-CJ235_01365;Dbxref=NCBI_GP:PMC20348.1;Name=PMC20348.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476530.1;locus_tag=CJ235_01365;product=oligoendopeptidase F;protein_id=PMC20348.1;transl_table=11 PNGG01000001.1 Genbank gene 271755 272729 . - . ID=gene-CJ235_01370;Name=CJ235_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01370 PNGG01000001.1 Protein Homology CDS 271755 272729 . - 0 ID=cds-PMC20349.1;Parent=gene-CJ235_01370;Dbxref=NCBI_GP:PMC20349.1;Name=PMC20349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06054.9;locus_tag=CJ235_01370;product=transcription factor;protein_id=PMC20349.1;transl_table=11 PNGG01000001.1 Genbank gene 273001 273714 . - . ID=gene-CJ235_01375;Name=CJ235_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01375 PNGG01000001.1 Protein Homology CDS 273001 273714 . - 0 ID=cds-PMC20350.1;Parent=gene-CJ235_01375;Dbxref=NCBI_GP:PMC20350.1;Name=PMC20350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448114.1;locus_tag=CJ235_01375;product=adaptor protein MecA;protein_id=PMC20350.1;transl_table=11 PNGG01000001.1 Genbank gene 273997 274392 . - . ID=gene-CJ235_01380;Name=CJ235_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01380 PNGG01000001.1 Protein Homology CDS 273997 274392 . - 0 ID=cds-PMC20351.1;Parent=gene-CJ235_01380;Dbxref=NCBI_GP:PMC20351.1;Name=PMC20351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383526.1;locus_tag=CJ235_01380;product=transcriptional regulator Spx;protein_id=PMC20351.1;transl_table=11 PNGG01000001.1 Genbank gene 274876 275868 . + . ID=gene-CJ235_01385;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CJ235_01385 PNGG01000001.1 Protein Homology CDS 274876 275868 . + 0 ID=cds-PMC20352.1;Parent=gene-CJ235_01385;Dbxref=NCBI_GP:PMC20352.1;Name=PMC20352.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383524.1;locus_tag=CJ235_01385;product=tryptophan--tRNA ligase;protein_id=PMC20352.1;transl_table=11 PNGG01000001.1 Genbank gene 275985 277655 . - . ID=gene-CJ235_01390;Name=CJ235_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01390 PNGG01000001.1 Protein Homology CDS 275985 277655 . - 0 ID=cds-PMC20353.1;Parent=gene-CJ235_01390;Dbxref=NCBI_GP:PMC20353.1;Name=PMC20353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472199.1;locus_tag=CJ235_01390;product=peptide ABC transporter substrate-binding protein;protein_id=PMC20353.1;transl_table=11 PNGG01000001.1 Genbank gene 277636 278610 . - . ID=gene-CJ235_01395;Name=CJ235_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01395 PNGG01000001.1 Protein Homology CDS 277636 278610 . - 0 ID=cds-PMC20354.1;Parent=gene-CJ235_01395;Dbxref=NCBI_GP:PMC20354.1;Name=PMC20354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472280.1;locus_tag=CJ235_01395;product=peptide ABC transporter ATP-binding protein;protein_id=PMC20354.1;transl_table=11 PNGG01000001.1 Genbank gene 278600 279682 . - . ID=gene-CJ235_01400;Name=CJ235_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01400 PNGG01000001.1 Protein Homology CDS 278600 279682 . - 0 ID=cds-PMC20355.1;Parent=gene-CJ235_01400;Dbxref=NCBI_GP:PMC20355.1;Name=PMC20355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483769.1;locus_tag=CJ235_01400;product=ABC transporter ATP-binding protein;protein_id=PMC20355.1;transl_table=11 PNGG01000001.1 Genbank gene 279700 280761 . - . ID=gene-CJ235_01405;Name=CJ235_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01405 PNGG01000001.1 Protein Homology CDS 279700 280761 . - 0 ID=cds-PMC20356.1;Parent=gene-CJ235_01405;Dbxref=NCBI_GP:PMC20356.1;Name=PMC20356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472205.1;locus_tag=CJ235_01405;product=ABC transporter permease;protein_id=PMC20356.1;transl_table=11 PNGG01000001.1 Genbank gene 280758 281687 . - . ID=gene-CJ235_01410;Name=CJ235_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01410 PNGG01000001.1 Protein Homology CDS 280758 281687 . - 0 ID=cds-PMC20357.1;Parent=gene-CJ235_01410;Dbxref=NCBI_GP:PMC20357.1;Name=PMC20357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CJ235_01410;product=ABC transporter permease;protein_id=PMC20357.1;transl_table=11 PNGG01000001.1 Genbank gene 281895 282272 . + . ID=gene-CJ235_01415;Name=CJ235_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01415 PNGG01000001.1 Protein Homology CDS 281895 282272 . + 0 ID=cds-PMC20358.1;Parent=gene-CJ235_01415;Dbxref=NCBI_GP:PMC20358.1;Name=PMC20358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472276.1;locus_tag=CJ235_01415;product=DUF3899 domain-containing protein;protein_id=PMC20358.1;transl_table=11 PNGG01000001.1 Genbank gene 282362 283594 . - . ID=gene-CJ235_01420;Name=CJ235_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01420 PNGG01000001.1 Protein Homology CDS 282362 283594 . - 0 ID=cds-PMC20359.1;Parent=gene-CJ235_01420;Dbxref=NCBI_GP:PMC20359.1;Name=PMC20359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508109.1;locus_tag=CJ235_01420;product=MFS transporter;protein_id=PMC20359.1;transl_table=11 PNGG01000001.1 Genbank gene 283739 284983 . - . ID=gene-CJ235_01425;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CJ235_01425 PNGG01000001.1 Protein Homology CDS 283739 284983 . - 0 ID=cds-PMC20360.1;Parent=gene-CJ235_01425;Dbxref=NCBI_GP:PMC20360.1;Name=PMC20360.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472227.1;locus_tag=CJ235_01425;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=PMC20360.1;transl_table=11 PNGG01000001.1 Genbank gene 284996 285937 . - . ID=gene-CJ235_01430;Name=CJ235_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01430 PNGG01000001.1 Protein Homology CDS 284996 285937 . - 0 ID=cds-PMC20361.1;Parent=gene-CJ235_01430;Dbxref=NCBI_GP:PMC20361.1;Name=PMC20361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CJ235_01430;product=ketoacyl-ACP synthase III;protein_id=PMC20361.1;transl_table=11 PNGG01000001.1 Genbank gene 286339 286533 . + . ID=gene-CJ235_01435;Name=CJ235_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01435 PNGG01000001.1 Protein Homology CDS 286339 286533 . + 0 ID=cds-PMC20362.1;Parent=gene-CJ235_01435;Dbxref=NCBI_GP:PMC20362.1;Name=PMC20362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303495.1;locus_tag=CJ235_01435;product=DUF2929 domain-containing protein;protein_id=PMC20362.1;transl_table=11 PNGG01000001.1 Genbank gene 286880 288373 . - . ID=gene-CJ235_01440;Name=CJ235_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01440 PNGG01000001.1 Protein Homology CDS 286880 288373 . - 0 ID=cds-PMC20363.1;Parent=gene-CJ235_01440;Dbxref=NCBI_GP:PMC20363.1;Name=PMC20363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765626.1;locus_tag=CJ235_01440;product=aldehyde dehydrogenase;protein_id=PMC20363.1;transl_table=11 PNGG01000001.1 Genbank gene 288748 291360 . - . ID=gene-CJ235_01445;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CJ235_01445 PNGG01000001.1 Protein Homology CDS 288748 291360 . - 0 ID=cds-PMC20364.1;Parent=gene-CJ235_01445;Dbxref=NCBI_GP:PMC20364.1;Name=PMC20364.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472234.1;locus_tag=CJ235_01445;product=ATP-dependent chaperone ClpB;protein_id=PMC20364.1;transl_table=11 PNGG01000001.1 Genbank gene 291714 292022 . - . ID=gene-CJ235_01450;Name=CJ235_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01450 PNGG01000001.1 Protein Homology CDS 291714 292022 . - 0 ID=cds-PMC20365.1;Parent=gene-CJ235_01450;Dbxref=NCBI_GP:PMC20365.1;Name=PMC20365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276244.1;locus_tag=CJ235_01450;product=metal-sulfur cluster assembly factor;protein_id=PMC20365.1;transl_table=11 PNGG01000001.1 Genbank gene 292181 293020 . + . ID=gene-CJ235_01455;Name=CJ235_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01455 PNGG01000001.1 Protein Homology CDS 292181 293020 . + 0 ID=cds-PMC20366.1;Parent=gene-CJ235_01455;Dbxref=NCBI_GP:PMC20366.1;Name=PMC20366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472224.1;locus_tag=CJ235_01455;product=Cof-type HAD-IIB family hydrolase;protein_id=PMC20366.1;transl_table=11 PNGG01000001.1 Genbank gene 293039 294361 . + . ID=gene-CJ235_01460;Name=CJ235_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01460 PNGG01000001.1 Protein Homology CDS 293039 294361 . + 0 ID=cds-PMC20367.1;Parent=gene-CJ235_01460;Dbxref=NCBI_GP:PMC20367.1;Name=PMC20367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472256.1;locus_tag=CJ235_01460;product=CoA-disulfide reductase;protein_id=PMC20367.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 294570 295868 . - . ID=gene-CJ235_01465;Name=CJ235_01465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_01465;pseudo=true PNGG01000001.1 Protein Homology CDS 294570 295868 . - 0 ID=cds-CJ235_01465;Parent=gene-CJ235_01465;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449452.1;locus_tag=CJ235_01465;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 296082 296474 . - . ID=gene-CJ235_01470;Name=CJ235_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01470 PNGG01000001.1 Protein Homology CDS 296082 296474 . - 0 ID=cds-PMC20368.1;Parent=gene-CJ235_01470;Dbxref=NCBI_GP:PMC20368.1;Name=PMC20368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508119.1;locus_tag=CJ235_01470;product=hypothetical protein;protein_id=PMC20368.1;transl_table=11 PNGG01000001.1 Genbank gene 296618 297532 . - . ID=gene-CJ235_01475;Name=CJ235_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01475 PNGG01000001.1 Protein Homology CDS 296618 297532 . - 0 ID=cds-PMC20369.1;Parent=gene-CJ235_01475;Dbxref=NCBI_GP:PMC20369.1;Name=PMC20369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472266.1;locus_tag=CJ235_01475;product=FAA hydrolase family protein;protein_id=PMC20369.1;transl_table=11 PNGG01000001.1 Genbank gene 297773 301441 . - . ID=gene-CJ235_01480;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CJ235_01480 PNGG01000001.1 Protein Homology CDS 297773 301441 . - 0 ID=cds-PMC20370.1;Parent=gene-CJ235_01480;Dbxref=NCBI_GP:PMC20370.1;Name=PMC20370.1;gbkey=CDS;gene=addA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472204.1;locus_tag=CJ235_01480;product=helicase-exonuclease AddAB subunit AddA;protein_id=PMC20370.1;transl_table=11 PNGG01000001.1 Genbank gene 301438 304899 . - . ID=gene-CJ235_01485;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CJ235_01485 PNGG01000001.1 Protein Homology CDS 301438 304899 . - 0 ID=cds-PMC20371.1;Parent=gene-CJ235_01485;Dbxref=NCBI_GP:PMC20371.1;Name=PMC20371.1;gbkey=CDS;gene=addB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472233.1;locus_tag=CJ235_01485;product=helicase-exonuclease AddAB subunit AddB;protein_id=PMC20371.1;transl_table=11 PNGG01000001.1 Genbank gene 305655 306224 . - . ID=gene-CJ235_01490;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CJ235_01490 PNGG01000001.1 Protein Homology CDS 305655 306224 . - 0 ID=cds-PMC20372.1;Parent=gene-CJ235_01490;Dbxref=NCBI_GP:PMC20372.1;Name=PMC20372.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469644.1;locus_tag=CJ235_01490;product=signal peptidase I;protein_id=PMC20372.1;transl_table=11 PNGG01000001.1 Genbank gene 306235 306762 . - . ID=gene-CJ235_01495;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CJ235_01495 PNGG01000001.1 Protein Homology CDS 306235 306762 . - 0 ID=cds-PMC20373.1;Parent=gene-CJ235_01495;Dbxref=NCBI_GP:PMC20373.1;Name=PMC20373.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472236.1;locus_tag=CJ235_01495;product=signal peptidase I;protein_id=PMC20373.1;transl_table=11 PNGG01000001.1 Genbank gene 307838 309169 . - . ID=gene-CJ235_01500;Name=CJ235_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01500 PNGG01000001.1 Protein Homology CDS 307838 309169 . - 0 ID=cds-PMC20374.1;Parent=gene-CJ235_01500;Dbxref=NCBI_GP:PMC20374.1;Name=PMC20374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764213.1;locus_tag=CJ235_01500;product=glucose-6-phosphate isomerase;protein_id=PMC20374.1;transl_table=11 PNGG01000001.1 Genbank gene 309494 310696 . + . ID=gene-CJ235_01505;Name=CJ235_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01505 PNGG01000001.1 Protein Homology CDS 309494 310696 . + 0 ID=cds-PMC20375.1;Parent=gene-CJ235_01505;Dbxref=NCBI_GP:PMC20375.1;Name=PMC20375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764212.1;locus_tag=CJ235_01505;product=argininosuccinate synthase;protein_id=PMC20375.1;transl_table=11 PNGG01000001.1 Genbank gene 310689 312062 . + . ID=gene-CJ235_01510;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CJ235_01510 PNGG01000001.1 Protein Homology CDS 310689 312062 . + 0 ID=cds-PMC20376.1;Parent=gene-CJ235_01510;Dbxref=NCBI_GP:PMC20376.1;Name=PMC20376.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472193.1;locus_tag=CJ235_01510;product=argininosuccinate lyase;protein_id=PMC20376.1;transl_table=11 PNGG01000001.1 Genbank gene 312090 313097 . + . ID=gene-CJ235_01515;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CJ235_01515 PNGG01000001.1 Protein Homology CDS 312090 313097 . + 0 ID=cds-PMC20377.1;Parent=gene-CJ235_01515;Dbxref=NCBI_GP:PMC20377.1;Name=PMC20377.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472253.1;locus_tag=CJ235_01515;product=ornithine carbamoyltransferase;protein_id=PMC20377.1;transl_table=11 PNGG01000001.1 Genbank gene 313378 314622 . - . ID=gene-CJ235_01520;Name=CJ235_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01520 PNGG01000001.1 Protein Homology CDS 313378 314622 . - 0 ID=cds-PMC20378.1;Parent=gene-CJ235_01520;Dbxref=NCBI_GP:PMC20378.1;Name=PMC20378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=CJ235_01520;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=PMC20378.1;transl_table=11 PNGG01000001.1 Genbank gene 314865 316058 . - . ID=gene-CJ235_01525;Name=CJ235_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01525 PNGG01000001.1 Protein Homology CDS 314865 316058 . - 0 ID=cds-PMC20379.1;Parent=gene-CJ235_01525;Dbxref=NCBI_GP:PMC20379.1;Name=PMC20379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383472.1;locus_tag=CJ235_01525;product=ornithine--oxo-acid transaminase;protein_id=PMC20379.1;transl_table=11 PNGG01000001.1 Genbank gene 316252 317796 . - . ID=gene-CJ235_01530;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CJ235_01530 PNGG01000001.1 Protein Homology CDS 316252 317796 . - 0 ID=cds-PMC20380.1;Parent=gene-CJ235_01530;Dbxref=NCBI_GP:PMC20380.1;Name=PMC20380.1;gbkey=CDS;gene=pruA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481864.1;locus_tag=CJ235_01530;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=PMC20380.1;transl_table=11 PNGG01000001.1 Genbank gene 318131 319264 . - . ID=gene-CJ235_01535;Name=CJ235_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01535 PNGG01000001.1 Protein Homology CDS 318131 319264 . - 0 ID=cds-PMC20381.1;Parent=gene-CJ235_01535;Dbxref=NCBI_GP:PMC20381.1;Name=PMC20381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303513.1;locus_tag=CJ235_01535;product=NADH-dependent flavin oxidoreductase;protein_id=PMC20381.1;transl_table=11 PNGG01000001.1 Genbank gene 319845 320225 . - . ID=gene-CJ235_01540;Name=CJ235_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01540 PNGG01000001.1 Protein Homology CDS 319845 320225 . - 0 ID=cds-PMC20382.1;Parent=gene-CJ235_01540;Dbxref=NCBI_GP:PMC20382.1;Name=PMC20382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433374.1;locus_tag=CJ235_01540;product=general stress protein;protein_id=PMC20382.1;transl_table=11 PNGG01000001.1 Genbank gene 320478 321074 . - . ID=gene-CJ235_01545;Name=CJ235_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01545 PNGG01000001.1 Protein Homology CDS 320478 321074 . - 0 ID=cds-PMC20383.1;Parent=gene-CJ235_01545;Dbxref=NCBI_GP:PMC20383.1;Name=PMC20383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764203.1;locus_tag=CJ235_01545;product=peptidylprolyl isomerase;protein_id=PMC20383.1;transl_table=11 PNGG01000001.1 Genbank gene 321140 321523 . + . ID=gene-CJ235_01550;Name=CJ235_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01550 PNGG01000001.1 Protein Homology CDS 321140 321523 . + 0 ID=cds-PMC20384.1;Parent=gene-CJ235_01550;Dbxref=NCBI_GP:PMC20384.1;Name=PMC20384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472232.1;locus_tag=CJ235_01550;product=kinase;protein_id=PMC20384.1;transl_table=11 PNGG01000001.1 Genbank gene 321748 324153 . + . ID=gene-CJ235_01555;Name=CJ235_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01555 PNGG01000001.1 Protein Homology CDS 321748 324153 . + 0 ID=cds-PMC20385.1;Parent=gene-CJ235_01555;Dbxref=NCBI_GP:PMC20385.1;Name=PMC20385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472245.1;locus_tag=CJ235_01555;product=Na+/H+ antiporter subunit A;protein_id=PMC20385.1;transl_table=11 PNGG01000001.1 Genbank gene 324146 324586 . + . ID=gene-CJ235_01560;Name=CJ235_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01560 PNGG01000001.1 Protein Homology CDS 324146 324586 . + 0 ID=cds-PMC20386.1;Parent=gene-CJ235_01560;Dbxref=NCBI_GP:PMC20386.1;Name=PMC20386.1;Note=subunit B of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in the case of S. meliloti it was proved to be involved specifically with K+ transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722346.1;locus_tag=CJ235_01560;product=Na(+)/H(+) antiporter subunit B;protein_id=PMC20386.1;transl_table=11 PNGG01000001.1 Genbank gene 324586 324933 . + . ID=gene-CJ235_01565;Name=CJ235_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01565 PNGG01000001.1 Protein Homology CDS 324586 324933 . + 0 ID=cds-PMC20387.1;Parent=gene-CJ235_01565;Dbxref=NCBI_GP:PMC20387.1;Name=PMC20387.1;Note=subunit C of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722347.1;locus_tag=CJ235_01565;product=Na(+)/H(+) antiporter subunit C;protein_id=PMC20387.1;transl_table=11 PNGG01000001.1 Genbank gene 324920 326416 . + . ID=gene-CJ235_01570;Name=CJ235_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01570 PNGG01000001.1 Protein Homology CDS 324920 326416 . + 0 ID=cds-PMC20388.1;Parent=gene-CJ235_01570;Dbxref=NCBI_GP:PMC20388.1;Name=PMC20388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722348.1;locus_tag=CJ235_01570;product=Na+/H+ antiporter subunit D;protein_id=PMC20388.1;transl_table=11 PNGG01000001.1 Genbank gene 326419 326898 . + . ID=gene-CJ235_01575;Name=CJ235_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01575 PNGG01000001.1 Protein Homology CDS 326419 326898 . + 0 ID=cds-PMC20389.1;Parent=gene-CJ235_01575;Dbxref=NCBI_GP:PMC20389.1;Name=PMC20389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508144.1;locus_tag=CJ235_01575;product=Na+/H+ antiporter subunit E;protein_id=PMC20389.1;transl_table=11 PNGG01000001.1 Genbank gene 326895 327188 . + . ID=gene-CJ235_01580;Name=CJ235_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01580 PNGG01000001.1 Protein Homology CDS 326895 327188 . + 0 ID=cds-PMC20390.1;Parent=gene-CJ235_01580;Dbxref=NCBI_GP:PMC20390.1;Name=PMC20390.1;Note=subunit F of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469664.1;locus_tag=CJ235_01580;product=Na(+)/H(+) antiporter subunit F;protein_id=PMC20390.1;transl_table=11 PNGG01000001.1 Genbank gene 327166 327522 . + . ID=gene-CJ235_01585;Name=CJ235_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01585 PNGG01000001.1 Protein Homology CDS 327166 327522 . + 0 ID=cds-PMC20391.1;Parent=gene-CJ235_01585;Dbxref=NCBI_GP:PMC20391.1;Name=PMC20391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614420.1;locus_tag=CJ235_01585;product=Na+/H+ antiporter subunit G1;protein_id=PMC20391.1;transl_table=11 PNGG01000001.1 Genbank gene 327756 328904 . + . ID=gene-CJ235_01590;Name=CJ235_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01590 PNGG01000001.1 Protein Homology CDS 327756 328904 . + 0 ID=cds-PMC20392.1;Parent=gene-CJ235_01590;Dbxref=NCBI_GP:PMC20392.1;Name=PMC20392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472208.1;locus_tag=CJ235_01590;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=PMC20392.1;transl_table=11 PNGG01000001.1 Genbank gene 329105 330340 . + . ID=gene-CJ235_01595;Name=CJ235_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01595 PNGG01000001.1 Protein Homology CDS 329105 330340 . + 0 ID=cds-PMC20393.1;Parent=gene-CJ235_01595;Dbxref=NCBI_GP:PMC20393.1;Name=PMC20393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472190.1;locus_tag=CJ235_01595;product=DUF1958 domain-containing protein;protein_id=PMC20393.1;transl_table=11 PNGG01000001.1 Genbank gene 330439 330816 . - . ID=gene-CJ235_01600;Name=CJ235_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01600 PNGG01000001.1 Protein Homology CDS 330439 330816 . - 0 ID=cds-PMC20394.1;Parent=gene-CJ235_01600;Dbxref=NCBI_GP:PMC20394.1;Name=PMC20394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508148.1;locus_tag=CJ235_01600;product=PaaI family thioesterase;protein_id=PMC20394.1;transl_table=11 PNGG01000001.1 Genbank gene 330841 332157 . - . ID=gene-CJ235_01605;Name=CJ235_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01605 PNGG01000001.1 Protein Homology CDS 330841 332157 . - 0 ID=cds-PMC20395.1;Parent=gene-CJ235_01605;Dbxref=NCBI_GP:PMC20395.1;Name=PMC20395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=CJ235_01605;product=sodium:proton antiporter;protein_id=PMC20395.1;transl_table=11 PNGG01000001.1 Genbank gene 332452 333930 . - . ID=gene-CJ235_01610;Name=CJ235_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01610 PNGG01000001.1 Protein Homology CDS 332452 333930 . - 0 ID=cds-PMC20396.1;Parent=gene-CJ235_01610;Dbxref=NCBI_GP:PMC20396.1;Name=PMC20396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472188.1;locus_tag=CJ235_01610;product=leucyl aminopeptidase family protein;protein_id=PMC20396.1;transl_table=11 PNGG01000001.1 Genbank gene 334018 335226 . - . ID=gene-CJ235_01615;Name=CJ235_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01615 PNGG01000001.1 Protein Homology CDS 334018 335226 . - 0 ID=cds-PMC20397.1;Parent=gene-CJ235_01615;Dbxref=NCBI_GP:PMC20397.1;Name=PMC20397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499431.1;locus_tag=CJ235_01615;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=PMC20397.1;transl_table=11 PNGG01000001.1 Genbank gene 335602 335961 . - . ID=gene-CJ235_01620;Name=CJ235_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01620 PNGG01000001.1 Protein Homology CDS 335602 335961 . - 0 ID=cds-PMC20398.1;Parent=gene-CJ235_01620;Dbxref=NCBI_GP:PMC20398.1;Name=PMC20398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276278.1;locus_tag=CJ235_01620;product=iron-sulfur cluster assembly accessory protein;protein_id=PMC20398.1;transl_table=11 PNGG01000001.1 Genbank gene 336400 336648 . - . ID=gene-CJ235_01625;Name=CJ235_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01625 PNGG01000001.1 Protein Homology CDS 336400 336648 . - 0 ID=cds-PMC20399.1;Parent=gene-CJ235_01625;Dbxref=NCBI_GP:PMC20399.1;Name=PMC20399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764188.1;locus_tag=CJ235_01625;product=DUF1450 domain-containing protein;protein_id=PMC20399.1;transl_table=11 PNGG01000001.1 Genbank gene 337124 338188 . + . ID=gene-CJ235_01630;Name=CJ235_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01630 PNGG01000001.1 Protein Homology CDS 337124 338188 . + 0 ID=cds-PMC20400.1;Parent=gene-CJ235_01630;Dbxref=NCBI_GP:PMC20400.1;Name=PMC20400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483814.1;locus_tag=CJ235_01630;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=PMC20400.1;transl_table=11 PNGG01000001.1 Genbank gene 338352 338687 . - . ID=gene-CJ235_01635;Name=CJ235_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01635 PNGG01000001.1 Protein Homology CDS 338352 338687 . - 0 ID=cds-PMC20401.1;Parent=gene-CJ235_01635;Dbxref=NCBI_GP:PMC20401.1;Name=PMC20401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433267.1;locus_tag=CJ235_01635;product=DUF1462 domain-containing protein;protein_id=PMC20401.1;transl_table=11 PNGG01000001.1 Genbank gene 338792 339034 . + . ID=gene-CJ235_01640;Name=CJ235_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01640 PNGG01000001.1 Protein Homology CDS 338792 339034 . + 0 ID=cds-PMC20402.1;Parent=gene-CJ235_01640;Dbxref=NCBI_GP:PMC20402.1;Name=PMC20402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383435.1;locus_tag=CJ235_01640;product=NifU family protein;protein_id=PMC20402.1;transl_table=11 PNGG01000001.1 Genbank gene 339093 340055 . - . ID=gene-CJ235_01645;Name=CJ235_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01645 PNGG01000001.1 Protein Homology CDS 339093 340055 . - 0 ID=cds-PMC20403.1;Parent=gene-CJ235_01645;Dbxref=NCBI_GP:PMC20403.1;Name=PMC20403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472248.1;locus_tag=CJ235_01645;product=D-glycerate dehydrogenase;protein_id=PMC20403.1;transl_table=11 PNGG01000001.1 Genbank gene 340057 340842 . - . ID=gene-CJ235_01650;Name=CJ235_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01650 PNGG01000001.1 Protein Homology CDS 340057 340842 . - 0 ID=cds-PMC20404.1;Parent=gene-CJ235_01650;Dbxref=NCBI_GP:PMC20404.1;Name=PMC20404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472250.1;locus_tag=CJ235_01650;product=TIGR01457 family HAD-type hydrolase;protein_id=PMC20404.1;transl_table=11 PNGG01000001.1 Genbank gene 340858 341280 . - . ID=gene-CJ235_01655;Name=CJ235_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01655 PNGG01000001.1 Protein Homology CDS 340858 341280 . - 0 ID=cds-PMC20405.1;Parent=gene-CJ235_01655;Dbxref=NCBI_GP:PMC20405.1;Name=PMC20405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722368.1;locus_tag=CJ235_01655;product=DUF86 domain-containing protein;protein_id=PMC20405.1;transl_table=11 PNGG01000001.1 Genbank gene 341518 341784 . + . ID=gene-CJ235_01660;Name=CJ235_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01660 PNGG01000001.1 Protein Homology CDS 341518 341784 . + 0 ID=cds-PMC20406.1;Parent=gene-CJ235_01660;Dbxref=NCBI_GP:PMC20406.1;Name=PMC20406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764174.1;locus_tag=CJ235_01660;product=DUF3055 domain-containing protein;protein_id=PMC20406.1;transl_table=11 PNGG01000001.1 Genbank gene 341913 342302 . - . ID=gene-CJ235_01665;Name=CJ235_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01665 PNGG01000001.1 Protein Homology CDS 341913 342302 . - 0 ID=cds-PMC20407.1;Parent=gene-CJ235_01665;Dbxref=NCBI_GP:PMC20407.1;Name=PMC20407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472255.1;locus_tag=CJ235_01665;product=DUF1027 domain-containing protein;protein_id=PMC20407.1;transl_table=11 PNGG01000001.1 Genbank gene 342636 343565 . - . ID=gene-CJ235_01670;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CJ235_01670 PNGG01000001.1 Protein Homology CDS 342636 343565 . - 0 ID=cds-PMC20408.1;Parent=gene-CJ235_01670;Dbxref=NCBI_GP:PMC20408.1;Name=PMC20408.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469687.1;locus_tag=CJ235_01670;product=lipoyl synthase;protein_id=PMC20408.1;transl_table=11 PNGG01000001.1 Genbank gene 343722 345056 . - . ID=gene-CJ235_01675;Name=CJ235_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01675 PNGG01000001.1 Protein Homology CDS 343722 345056 . - 0 ID=cds-PMC20409.1;Parent=gene-CJ235_01675;Dbxref=NCBI_GP:PMC20409.1;Name=PMC20409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472221.1;locus_tag=CJ235_01675;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=PMC20409.1;transl_table=11 PNGG01000001.1 Genbank gene 345074 345898 . - . ID=gene-CJ235_01680;Name=CJ235_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01680 PNGG01000001.1 Protein Homology CDS 345074 345898 . - 0 ID=cds-PMC20410.1;Parent=gene-CJ235_01680;Dbxref=NCBI_GP:PMC20410.1;Name=PMC20410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469689.1;locus_tag=CJ235_01680;product=sulfite exporter TauE/SafE family protein;protein_id=PMC20410.1;transl_table=11 PNGG01000001.1 Genbank gene 345911 346759 . - . ID=gene-CJ235_01685;Name=CJ235_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01685 PNGG01000001.1 Protein Homology CDS 345911 346759 . - 0 ID=cds-PMC20411.1;Parent=gene-CJ235_01685;Dbxref=NCBI_GP:PMC20411.1;Name=PMC20411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499411.1;locus_tag=CJ235_01685;product=DUF72 domain-containing protein;protein_id=PMC20411.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 346926 347995 . - . ID=gene-CJ235_01690;Name=CJ235_01690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_01690;pseudo=true PNGG01000001.1 Protein Homology CDS 346926 347995 . - 0 ID=cds-CJ235_01690;Parent=gene-CJ235_01690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508171.1;locus_tag=CJ235_01690;product=nitronate monooxygenase;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 348011 349036 . - . ID=gene-CJ235_01695;Name=CJ235_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01695 PNGG01000001.1 Protein Homology CDS 348011 349036 . - 0 ID=cds-PMC20412.1;Parent=gene-CJ235_01695;Dbxref=NCBI_GP:PMC20412.1;Name=PMC20412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472210.1;locus_tag=CJ235_01695;product=DUF21 domain-containing protein;protein_id=PMC20412.1;transl_table=11 PNGG01000001.1 Genbank gene 349453 350367 . + . ID=gene-CJ235_01700;Name=CJ235_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01700 PNGG01000001.1 GeneMarkS+ CDS 349453 350367 . + 0 ID=cds-PMC20413.1;Parent=gene-CJ235_01700;Dbxref=NCBI_GP:PMC20413.1;Name=PMC20413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01700;product=hypothetical protein;protein_id=PMC20413.1;transl_table=11 PNGG01000001.1 Genbank gene 350446 351252 . + . ID=gene-CJ235_01705;Name=CJ235_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01705 PNGG01000001.1 GeneMarkS+ CDS 350446 351252 . + 0 ID=cds-PMC20414.1;Parent=gene-CJ235_01705;Dbxref=NCBI_GP:PMC20414.1;Name=PMC20414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01705;product=hypothetical protein;protein_id=PMC20414.1;transl_table=11 PNGG01000001.1 Genbank gene 351456 352076 . - . ID=gene-CJ235_01710;Name=CJ235_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01710 PNGG01000001.1 GeneMarkS+ CDS 351456 352076 . - 0 ID=cds-PMC20415.1;Parent=gene-CJ235_01710;Dbxref=NCBI_GP:PMC20415.1;Name=PMC20415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01710;product=hypothetical protein;protein_id=PMC20415.1;transl_table=11 PNGG01000001.1 Genbank gene 352095 352985 . - . ID=gene-CJ235_01715;Name=CJ235_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01715 PNGG01000001.1 Protein Homology CDS 352095 352985 . - 0 ID=cds-PMC20416.1;Parent=gene-CJ235_01715;Dbxref=NCBI_GP:PMC20416.1;Name=PMC20416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364661.1;locus_tag=CJ235_01715;product=hypothetical protein;protein_id=PMC20416.1;transl_table=11 PNGG01000001.1 Genbank gene 353155 353565 . - . ID=gene-CJ235_01720;Name=CJ235_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01720 PNGG01000001.1 GeneMarkS+ CDS 353155 353565 . - 0 ID=cds-PMC20417.1;Parent=gene-CJ235_01720;Dbxref=NCBI_GP:PMC20417.1;Name=PMC20417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01720;product=hypothetical protein;protein_id=PMC20417.1;transl_table=11 PNGG01000001.1 Genbank gene 353540 354052 . - . ID=gene-CJ235_01725;Name=CJ235_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01725 PNGG01000001.1 GeneMarkS+ CDS 353540 354052 . - 0 ID=cds-PMC20418.1;Parent=gene-CJ235_01725;Dbxref=NCBI_GP:PMC20418.1;Name=PMC20418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01725;product=hypothetical protein;protein_id=PMC20418.1;transl_table=11 PNGG01000001.1 Genbank gene 354505 355809 . - . ID=gene-CJ235_01730;Name=CJ235_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01730 PNGG01000001.1 GeneMarkS+ CDS 354505 355809 . - 0 ID=cds-PMC20419.1;Parent=gene-CJ235_01730;Dbxref=NCBI_GP:PMC20419.1;Name=PMC20419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01730;product=hypothetical protein;protein_id=PMC20419.1;transl_table=11 PNGG01000001.1 Genbank gene 356041 357438 . - . ID=gene-CJ235_01735;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CJ235_01735 PNGG01000001.1 Protein Homology CDS 356041 357438 . - 0 ID=cds-PMC20420.1;Parent=gene-CJ235_01735;Dbxref=NCBI_GP:PMC20420.1;Name=PMC20420.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CJ235_01735;product=Fe-S cluster assembly protein SufB;protein_id=PMC20420.1;transl_table=11 PNGG01000001.1 Genbank gene 357584 358030 . - . ID=gene-CJ235_01740;Name=CJ235_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01740 PNGG01000001.1 Protein Homology CDS 357584 358030 . - 0 ID=cds-PMC20421.1;Parent=gene-CJ235_01740;Dbxref=NCBI_GP:PMC20421.1;Name=PMC20421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764164.1;locus_tag=CJ235_01740;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=PMC20421.1;transl_table=11 PNGG01000001.1 Genbank gene 358020 359267 . - . ID=gene-CJ235_01745;Name=CJ235_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01745 PNGG01000001.1 Protein Homology CDS 358020 359267 . - 0 ID=cds-PMC20422.1;Parent=gene-CJ235_01745;Dbxref=NCBI_GP:PMC20422.1;Name=PMC20422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499403.1;locus_tag=CJ235_01745;product=cysteine desulfurase;protein_id=PMC20422.1;transl_table=11 PNGG01000001.1 Genbank gene 359410 360717 . - . ID=gene-CJ235_01750;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CJ235_01750 PNGG01000001.1 Protein Homology CDS 359410 360717 . - 0 ID=cds-PMC20423.1;Parent=gene-CJ235_01750;Dbxref=NCBI_GP:PMC20423.1;Name=PMC20423.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764162.1;locus_tag=CJ235_01750;product=Fe-S cluster assembly protein SufD;protein_id=PMC20423.1;transl_table=11 PNGG01000001.1 Genbank gene 360787 361548 . - . ID=gene-CJ235_01755;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CJ235_01755 PNGG01000001.1 Protein Homology CDS 360787 361548 . - 0 ID=cds-PMC20424.1;Parent=gene-CJ235_01755;Dbxref=NCBI_GP:PMC20424.1;Name=PMC20424.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764161.1;locus_tag=CJ235_01755;product=Fe-S cluster assembly ATPase SufC;protein_id=PMC20424.1;transl_table=11 PNGG01000001.1 Genbank gene 361921 363132 . - . ID=gene-CJ235_01760;Name=CJ235_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01760 PNGG01000001.1 Protein Homology CDS 361921 363132 . - 0 ID=cds-PMC20425.1;Parent=gene-CJ235_01760;Dbxref=NCBI_GP:PMC20425.1;Name=PMC20425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385010.1;locus_tag=CJ235_01760;product=Fic family protein;protein_id=PMC20425.1;transl_table=11 PNGG01000001.1 Genbank gene 363403 363768 . + . ID=gene-CJ235_01765;Name=CJ235_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01765 PNGG01000001.1 Protein Homology CDS 363403 363768 . + 0 ID=cds-PMC20806.1;Parent=gene-CJ235_01765;Dbxref=NCBI_GP:PMC20806.1;Name=PMC20806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473133.1;locus_tag=CJ235_01765;product=hypothetical protein;protein_id=PMC20806.1;transl_table=11 PNGG01000001.1 Genbank gene 364015 364380 . + . ID=gene-CJ235_01770;Name=CJ235_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01770 PNGG01000001.1 Protein Homology CDS 364015 364380 . + 0 ID=cds-PMC20807.1;Parent=gene-CJ235_01770;Dbxref=NCBI_GP:PMC20807.1;Name=PMC20807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473133.1;locus_tag=CJ235_01770;product=hypothetical protein;protein_id=PMC20807.1;transl_table=11 PNGG01000001.1 Genbank gene 364600 364962 . + . ID=gene-CJ235_01775;Name=CJ235_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01775 PNGG01000001.1 Protein Homology CDS 364600 364962 . + 0 ID=cds-PMC20808.1;Parent=gene-CJ235_01775;Dbxref=NCBI_GP:PMC20808.1;Name=PMC20808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476461.1;locus_tag=CJ235_01775;product=DUF1433 domain-containing protein;protein_id=PMC20808.1;transl_table=11 PNGG01000001.1 Genbank gene 365208 365582 . + . ID=gene-CJ235_01780;Name=CJ235_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01780 PNGG01000001.1 Protein Homology CDS 365208 365582 . + 0 ID=cds-PMC20809.1;Parent=gene-CJ235_01780;Dbxref=NCBI_GP:PMC20809.1;Name=PMC20809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473133.1;locus_tag=CJ235_01780;product=DUF1433 domain-containing protein;protein_id=PMC20809.1;transl_table=11 PNGG01000001.1 Genbank gene 365691 366500 . - . ID=gene-CJ235_01785;Name=CJ235_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01785 PNGG01000001.1 Protein Homology CDS 365691 366500 . - 0 ID=cds-PMC20426.1;Parent=gene-CJ235_01785;Dbxref=NCBI_GP:PMC20426.1;Name=PMC20426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467439.1;locus_tag=CJ235_01785;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=PMC20426.1;transl_table=11 PNGG01000001.1 Genbank gene 366521 367216 . - . ID=gene-CJ235_01790;Name=CJ235_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01790 PNGG01000001.1 Protein Homology CDS 366521 367216 . - 0 ID=cds-PMC20427.1;Parent=gene-CJ235_01790;Dbxref=NCBI_GP:PMC20427.1;Name=PMC20427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CJ235_01790;product=proline/glycine betaine ABC transporter permease ProW;protein_id=PMC20427.1;transl_table=11 PNGG01000001.1 Genbank gene 367209 368234 . - . ID=gene-CJ235_01795;Name=CJ235_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01795 PNGG01000001.1 Protein Homology CDS 367209 368234 . - 0 ID=cds-PMC20428.1;Parent=gene-CJ235_01795;Dbxref=NCBI_GP:PMC20428.1;Name=PMC20428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508187.1;locus_tag=CJ235_01795;product=methionine ABC transporter ATP-binding protein;protein_id=PMC20428.1;transl_table=11 PNGG01000001.1 cmsearch riboswitch 368522 368627 . - . ID=id-PNGG01000001.1:368522..368627;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000001.1 Genbank gene 368684 368983 . - . ID=gene-CJ235_01800;Name=CJ235_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01800 PNGG01000001.1 Protein Homology CDS 368684 368983 . - 0 ID=cds-PMC20429.1;Parent=gene-CJ235_01800;Dbxref=NCBI_GP:PMC20429.1;Name=PMC20429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481592.1;locus_tag=CJ235_01800;product=thioredoxin;protein_id=PMC20429.1;transl_table=11 PNGG01000001.1 Genbank gene 368980 369372 . - . ID=gene-CJ235_01805;Name=CJ235_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01805 PNGG01000001.1 Protein Homology CDS 368980 369372 . - 0 ID=cds-PMC20430.1;Parent=gene-CJ235_01805;Dbxref=NCBI_GP:PMC20430.1;Name=PMC20430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303546.1;locus_tag=CJ235_01805;product=topiosmerase;protein_id=PMC20430.1;transl_table=11 PNGG01000001.1 Genbank gene 369708 370088 . - . ID=gene-CJ235_01810;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CJ235_01810 PNGG01000001.1 Protein Homology CDS 369708 370088 . - 0 ID=cds-PMC20431.1;Parent=gene-CJ235_01810;Dbxref=NCBI_GP:PMC20431.1;Name=PMC20431.1;gbkey=CDS;gene=gcvH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=CJ235_01810;product=glycine cleavage system protein H;protein_id=PMC20431.1;transl_table=11 PNGG01000001.1 Genbank gene 370281 370637 . - . ID=gene-CJ235_01815;Name=CJ235_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01815 PNGG01000001.1 Protein Homology CDS 370281 370637 . - 0 ID=cds-PMC20432.1;Parent=gene-CJ235_01815;Dbxref=NCBI_GP:PMC20432.1;Name=PMC20432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722394.1;locus_tag=CJ235_01815;product=arsenate reductase family protein;protein_id=PMC20432.1;transl_table=11 PNGG01000001.1 Genbank gene 370783 371103 . + . ID=gene-CJ235_01820;Name=CJ235_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01820 PNGG01000001.1 Protein Homology CDS 370783 371103 . + 0 ID=cds-PMC20433.1;Parent=gene-CJ235_01820;Dbxref=NCBI_GP:PMC20433.1;Name=PMC20433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499388.1;locus_tag=CJ235_01820;product=thioredoxin;protein_id=PMC20433.1;transl_table=11 PNGG01000001.1 Genbank gene 371207 371746 . - . ID=gene-CJ235_01825;Name=CJ235_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01825 PNGG01000001.1 Protein Homology CDS 371207 371746 . - 0 ID=cds-PMC20434.1;Parent=gene-CJ235_01825;Dbxref=NCBI_GP:PMC20434.1;Name=PMC20434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472293.1;locus_tag=CJ235_01825;product=nitroreductase;protein_id=PMC20434.1;transl_table=11 PNGG01000001.1 Genbank gene 371813 372529 . - . ID=gene-CJ235_01830;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CJ235_01830 PNGG01000001.1 Protein Homology CDS 371813 372529 . - 0 ID=cds-PMC20435.1;Parent=gene-CJ235_01830;Dbxref=NCBI_GP:PMC20435.1;Name=PMC20435.1;gbkey=CDS;gene=aroD;inference=COORDINATES: protein motif:HMM:PF01487.13;locus_tag=CJ235_01830;product=type I 3-dehydroquinate dehydratase;protein_id=PMC20435.1;transl_table=11 PNGG01000001.1 Genbank gene 372803 373228 . + . ID=gene-CJ235_01835;Name=CJ235_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01835 PNGG01000001.1 Protein Homology CDS 372803 373228 . + 0 ID=cds-PMC20436.1;Parent=gene-CJ235_01835;Dbxref=NCBI_GP:PMC20436.1;Name=PMC20436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764146.1;locus_tag=CJ235_01835;product=organic hydroperoxide resistance protein;protein_id=PMC20436.1;transl_table=11 PNGG01000001.1 Genbank gene 373731 374246 . + . ID=gene-CJ235_01840;Name=CJ235_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01840 PNGG01000001.1 Protein Homology CDS 373731 374246 . + 0 ID=cds-PMC20437.1;Parent=gene-CJ235_01840;Dbxref=NCBI_GP:PMC20437.1;Name=PMC20437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13420.5;locus_tag=CJ235_01840;product=GNAT family N-acetyltransferase;protein_id=PMC20437.1;transl_table=11 PNGG01000001.1 Genbank gene 374378 374629 . + . ID=gene-CJ235_01845;Name=CJ235_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01845 PNGG01000001.1 GeneMarkS+ CDS 374378 374629 . + 0 ID=cds-PMC20438.1;Parent=gene-CJ235_01845;Dbxref=NCBI_GP:PMC20438.1;Name=PMC20438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01845;product=hypothetical protein;protein_id=PMC20438.1;transl_table=11 PNGG01000001.1 Genbank gene 374794 375024 . + . ID=gene-CJ235_01850;Name=CJ235_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01850 PNGG01000001.1 Protein Homology CDS 374794 375024 . + 0 ID=cds-PMC20439.1;Parent=gene-CJ235_01850;Dbxref=NCBI_GP:PMC20439.1;Name=PMC20439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508200.1;locus_tag=CJ235_01850;product=hypothetical protein;protein_id=PMC20439.1;transl_table=11 PNGG01000001.1 Genbank gene 375028 375240 . - . ID=gene-CJ235_01855;Name=CJ235_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01855 PNGG01000001.1 Protein Homology CDS 375028 375240 . - 0 ID=cds-PMC20440.1;Parent=gene-CJ235_01855;Dbxref=NCBI_GP:PMC20440.1;Name=PMC20440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472302.1;locus_tag=CJ235_01855;product=hypothetical protein;protein_id=PMC20440.1;transl_table=11 PNGG01000001.1 Genbank gene 375559 375765 . - . ID=gene-CJ235_01860;Name=CJ235_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01860 PNGG01000001.1 Protein Homology CDS 375559 375765 . - 0 ID=cds-PMC20441.1;Parent=gene-CJ235_01860;Dbxref=NCBI_GP:PMC20441.1;Name=PMC20441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508202.1;locus_tag=CJ235_01860;product=NINE protein;protein_id=PMC20441.1;transl_table=11 PNGG01000001.1 Genbank gene 376036 376227 . + . ID=gene-CJ235_01865;Name=CJ235_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01865 PNGG01000001.1 Protein Homology CDS 376036 376227 . + 0 ID=cds-PMC20442.1;Parent=gene-CJ235_01865;Dbxref=NCBI_GP:PMC20442.1;Name=PMC20442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472307.1;locus_tag=CJ235_01865;product=hypothetical protein;protein_id=PMC20442.1;transl_table=11 PNGG01000001.1 Genbank gene 376266 376517 . + . ID=gene-CJ235_01870;Name=CJ235_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01870 PNGG01000001.1 GeneMarkS+ CDS 376266 376517 . + 0 ID=cds-PMC20443.1;Parent=gene-CJ235_01870;Dbxref=NCBI_GP:PMC20443.1;Name=PMC20443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01870;product=hypothetical protein;protein_id=PMC20443.1;transl_table=11 PNGG01000001.1 Genbank gene 377653 378396 . + . ID=gene-CJ235_01875;Name=CJ235_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01875 PNGG01000001.1 Protein Homology CDS 377653 378396 . + 0 ID=cds-PMC20444.1;Parent=gene-CJ235_01875;Dbxref=NCBI_GP:PMC20444.1;Name=PMC20444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472294.1;locus_tag=CJ235_01875;product=hypothetical protein;protein_id=PMC20444.1;transl_table=11 PNGG01000001.1 Genbank gene 378682 379203 . - . ID=gene-CJ235_01880;Name=CJ235_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01880 PNGG01000001.1 GeneMarkS+ CDS 378682 379203 . - 0 ID=cds-PMC20445.1;Parent=gene-CJ235_01880;Dbxref=NCBI_GP:PMC20445.1;Name=PMC20445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01880;product=hypothetical protein;protein_id=PMC20445.1;transl_table=11 PNGG01000001.1 Genbank gene 379451 380152 . + . ID=gene-CJ235_01885;Name=CJ235_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01885 PNGG01000001.1 Protein Homology CDS 379451 380152 . + 0 ID=cds-PMC20446.1;Parent=gene-CJ235_01885;Dbxref=NCBI_GP:PMC20446.1;Name=PMC20446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472291.1;locus_tag=CJ235_01885;product=branched-chain amino acid transporter AzlC;protein_id=PMC20446.1;transl_table=11 PNGG01000001.1 Genbank gene 380149 380475 . + . ID=gene-CJ235_01890;Name=CJ235_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01890 PNGG01000001.1 Protein Homology CDS 380149 380475 . + 0 ID=cds-PMC20447.1;Parent=gene-CJ235_01890;Dbxref=NCBI_GP:PMC20447.1;Name=PMC20447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479822.1;locus_tag=CJ235_01890;product=branched-chain amino acid transporter AzlD;protein_id=PMC20447.1;transl_table=11 PNGG01000001.1 Genbank gene 380659 381192 . + . ID=gene-CJ235_01895;Name=CJ235_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01895 PNGG01000001.1 GeneMarkS+ CDS 380659 381192 . + 0 ID=cds-PMC20448.1;Parent=gene-CJ235_01895;Dbxref=NCBI_GP:PMC20448.1;Name=PMC20448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01895;product=hypothetical protein;protein_id=PMC20448.1;transl_table=11 PNGG01000001.1 Genbank gene 381499 382092 . + . ID=gene-CJ235_01900;Name=CJ235_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01900 PNGG01000001.1 GeneMarkS+ CDS 381499 382092 . + 0 ID=cds-PMC20449.1;Parent=gene-CJ235_01900;Dbxref=NCBI_GP:PMC20449.1;Name=PMC20449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01900;product=hypothetical protein;protein_id=PMC20449.1;transl_table=11 PNGG01000001.1 Genbank gene 382292 383272 . + . ID=gene-CJ235_01905;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CJ235_01905 PNGG01000001.1 Protein Homology CDS 382292 383272 . + 0 ID=cds-PMC20450.1;Parent=gene-CJ235_01905;Dbxref=NCBI_GP:PMC20450.1;Name=PMC20450.1;gbkey=CDS;gene=guaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303192.1;locus_tag=CJ235_01905;product=GMP reductase;protein_id=PMC20450.1;transl_table=11 PNGG01000001.1 Genbank gene 383345 383992 . - . ID=gene-CJ235_01910;Name=CJ235_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01910 PNGG01000001.1 Protein Homology CDS 383345 383992 . - 0 ID=cds-PMC20451.1;Parent=gene-CJ235_01910;Dbxref=NCBI_GP:PMC20451.1;Name=PMC20451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16069.3;locus_tag=CJ235_01910;product=DUF4811 domain-containing protein;protein_id=PMC20451.1;transl_table=11 PNGG01000001.1 Genbank gene 383989 385497 . - . ID=gene-CJ235_01915;Name=CJ235_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01915 PNGG01000001.1 Protein Homology CDS 383989 385497 . - 0 ID=cds-PMC20452.1;Parent=gene-CJ235_01915;Dbxref=NCBI_GP:PMC20452.1;Name=PMC20452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007892342.1;locus_tag=CJ235_01915;product=MFS transporter;protein_id=PMC20452.1;transl_table=11 PNGG01000001.1 Genbank gene 385644 386219 . + . ID=gene-CJ235_01920;Name=CJ235_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01920 PNGG01000001.1 Protein Homology CDS 385644 386219 . + 0 ID=cds-PMC20453.1;Parent=gene-CJ235_01920;Dbxref=NCBI_GP:PMC20453.1;Name=PMC20453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=CJ235_01920;product=TetR/AcrR family transcriptional regulator;protein_id=PMC20453.1;transl_table=11 PNGG01000001.1 Genbank gene 386252 386626 . - . ID=gene-CJ235_01925;Name=CJ235_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01925 PNGG01000001.1 GeneMarkS+ CDS 386252 386626 . - 0 ID=cds-PMC20454.1;Parent=gene-CJ235_01925;Dbxref=NCBI_GP:PMC20454.1;Name=PMC20454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01925;product=hypothetical protein;protein_id=PMC20454.1;transl_table=11 PNGG01000001.1 Genbank gene 386801 387127 . + . ID=gene-CJ235_01930;Name=CJ235_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01930 PNGG01000001.1 Protein Homology CDS 386801 387127 . + 0 ID=cds-PMC20455.1;Parent=gene-CJ235_01930;Dbxref=NCBI_GP:PMC20455.1;Name=PMC20455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472941.1;locus_tag=CJ235_01930;product=hypothetical protein;protein_id=PMC20455.1;transl_table=11 PNGG01000001.1 Genbank gene 387405 388022 . - . ID=gene-CJ235_01935;Name=CJ235_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01935 PNGG01000001.1 GeneMarkS+ CDS 387405 388022 . - 0 ID=cds-PMC20456.1;Parent=gene-CJ235_01935;Dbxref=NCBI_GP:PMC20456.1;Name=PMC20456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01935;product=hypothetical protein;protein_id=PMC20456.1;transl_table=11 PNGG01000001.1 Genbank gene 388022 388201 . - . ID=gene-CJ235_01940;Name=CJ235_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01940 PNGG01000001.1 GeneMarkS+ CDS 388022 388201 . - 0 ID=cds-PMC20457.1;Parent=gene-CJ235_01940;Dbxref=NCBI_GP:PMC20457.1;Name=PMC20457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_01940;product=hypothetical protein;protein_id=PMC20457.1;transl_table=11 PNGG01000001.1 Genbank gene 388669 389029 . - . ID=gene-CJ235_01945;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CJ235_01945 PNGG01000001.1 cmsearch tmRNA 388669 389029 . - . ID=rna-CJ235_01945;Parent=gene-CJ235_01945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_01945;product=transfer-messenger RNA PNGG01000001.1 cmsearch exon 388669 389029 . - . ID=exon-CJ235_01945-1;Parent=rna-CJ235_01945;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_01945;product=transfer-messenger RNA PNGG01000001.1 Genbank gene 389215 389685 . - . ID=gene-CJ235_01950;Name=CJ235_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01950 PNGG01000001.1 Protein Homology CDS 389215 389685 . - 0 ID=cds-PMC20458.1;Parent=gene-CJ235_01950;Dbxref=NCBI_GP:PMC20458.1;Name=PMC20458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=CJ235_01950;product=SsrA-binding protein SmpB;protein_id=PMC20458.1;transl_table=11 PNGG01000001.1 Genbank gene 389708 392086 . - . ID=gene-CJ235_01955;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CJ235_01955 PNGG01000001.1 Protein Homology CDS 389708 392086 . - 0 ID=cds-PMC20459.1;Parent=gene-CJ235_01955;Dbxref=NCBI_GP:PMC20459.1;Name=PMC20459.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CJ235_01955;product=ribonuclease R;protein_id=PMC20459.1;transl_table=11 PNGG01000001.1 Genbank gene 392129 392875 . - . ID=gene-CJ235_01960;Name=CJ235_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01960 PNGG01000001.1 Protein Homology CDS 392129 392875 . - 0 ID=cds-PMC20460.1;Parent=gene-CJ235_01960;Dbxref=NCBI_GP:PMC20460.1;Name=PMC20460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168959.1;locus_tag=CJ235_01960;product=carboxylesterase;protein_id=PMC20460.1;transl_table=11 PNGG01000001.1 Genbank gene 393060 393293 . - . ID=gene-CJ235_01965;Name=CJ235_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01965 PNGG01000001.1 Protein Homology CDS 393060 393293 . - 0 ID=cds-PMC20461.1;Parent=gene-CJ235_01965;Dbxref=NCBI_GP:PMC20461.1;Name=PMC20461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469442.1;locus_tag=CJ235_01965;product=preprotein translocase subunit SecG;protein_id=PMC20461.1;transl_table=11 PNGG01000001.1 Genbank gene 393362 393823 . - . ID=gene-CJ235_01970;Name=CJ235_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01970 PNGG01000001.1 Protein Homology CDS 393362 393823 . - 0 ID=cds-PMC20462.1;Parent=gene-CJ235_01970;Dbxref=NCBI_GP:PMC20462.1;Name=PMC20462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472929.1;locus_tag=CJ235_01970;product=hypothetical protein;protein_id=PMC20462.1;transl_table=11 PNGG01000001.1 Genbank gene 394038 395342 . - . ID=gene-CJ235_01975;Name=CJ235_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01975 PNGG01000001.1 Protein Homology CDS 394038 395342 . - 0 ID=cds-PMC20463.1;Parent=gene-CJ235_01975;Dbxref=NCBI_GP:PMC20463.1;Name=PMC20463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CJ235_01975;product=phosphopyruvate hydratase;protein_id=PMC20463.1;transl_table=11 PNGG01000001.1 Genbank gene 395495 397012 . - . ID=gene-CJ235_01980;Name=CJ235_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01980 PNGG01000001.1 Protein Homology CDS 395495 397012 . - 0 ID=cds-PMC20464.1;Parent=gene-CJ235_01980;Dbxref=NCBI_GP:PMC20464.1;Name=PMC20464.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CJ235_01980;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=PMC20464.1;transl_table=11 PNGG01000001.1 Genbank gene 397014 397775 . - . ID=gene-CJ235_01985;Name=CJ235_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_01985 PNGG01000001.1 Protein Homology CDS 397014 397775 . - 0 ID=cds-PMC20465.1;Parent=gene-CJ235_01985;Dbxref=NCBI_GP:PMC20465.1;Name=PMC20465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764114.1;locus_tag=CJ235_01985;product=triose-phosphate isomerase;protein_id=PMC20465.1;transl_table=11 PNGG01000001.1 Genbank gene 397832 399022 . - . ID=gene-CJ235_01990;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CJ235_01990 PNGG01000001.1 Protein Homology CDS 397832 399022 . - 0 ID=cds-PMC20466.1;Parent=gene-CJ235_01990;Dbxref=NCBI_GP:PMC20466.1;Name=PMC20466.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=CJ235_01990;product=phosphoglycerate kinase;protein_id=PMC20466.1;transl_table=11 PNGG01000001.1 Genbank gene 399155 400162 . - . ID=gene-CJ235_01995;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CJ235_01995 PNGG01000001.1 Protein Homology CDS 399155 400162 . - 0 ID=cds-PMC20467.1;Parent=gene-CJ235_01995;Dbxref=NCBI_GP:PMC20467.1;Name=PMC20467.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764112.1;locus_tag=CJ235_01995;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=PMC20467.1;transl_table=11 PNGG01000001.1 Genbank gene 400227 401243 . - . ID=gene-CJ235_02000;Name=CJ235_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02000 PNGG01000001.1 Protein Homology CDS 400227 401243 . - 0 ID=cds-PMC20468.1;Parent=gene-CJ235_02000;Dbxref=NCBI_GP:PMC20468.1;Name=PMC20468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472936.1;locus_tag=CJ235_02000;product=hypothetical protein;protein_id=PMC20468.1;transl_table=11 PNGG01000001.1 Genbank gene 401528 401794 . + . ID=gene-CJ235_02005;Name=CJ235_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02005 PNGG01000001.1 Protein Homology CDS 401528 401794 . + 0 ID=cds-PMC20469.1;Parent=gene-CJ235_02005;Dbxref=NCBI_GP:PMC20469.1;Name=PMC20469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276379.1;locus_tag=CJ235_02005;product=hypothetical protein;protein_id=PMC20469.1;transl_table=11 PNGG01000001.1 Genbank gene 401846 402439 . + . ID=gene-CJ235_02010;Name=CJ235_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02010 PNGG01000001.1 GeneMarkS+ CDS 401846 402439 . + 0 ID=cds-PMC20470.1;Parent=gene-CJ235_02010;Dbxref=NCBI_GP:PMC20470.1;Name=PMC20470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02010;product=hypothetical protein;protein_id=PMC20470.1;transl_table=11 PNGG01000001.1 Genbank gene 402556 402804 . + . ID=gene-CJ235_02015;Name=CJ235_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02015 PNGG01000001.1 GeneMarkS+ CDS 402556 402804 . + 0 ID=cds-PMC20471.1;Parent=gene-CJ235_02015;Dbxref=NCBI_GP:PMC20471.1;Name=PMC20471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02015;product=hypothetical protein;protein_id=PMC20471.1;transl_table=11 PNGG01000001.1 Genbank gene 402841 403425 . - . ID=gene-CJ235_02020;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CJ235_02020 PNGG01000001.1 Protein Homology CDS 402841 403425 . - 0 ID=cds-PMC20472.1;Parent=gene-CJ235_02020;Dbxref=NCBI_GP:PMC20472.1;Name=PMC20472.1;gbkey=CDS;gene=clpP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899677.1;locus_tag=CJ235_02020;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=PMC20472.1;transl_table=11 PNGG01000001.1 Genbank gene 403581 403652 . + . ID=gene-CJ235_02025;Name=CJ235_02025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_02025 PNGG01000001.1 tRNAscan-SE tRNA 403581 403652 . + . ID=rna-CJ235_02025;Parent=gene-CJ235_02025;anticodon=(pos:403614..403616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_02025;product=tRNA-Arg PNGG01000001.1 tRNAscan-SE exon 403581 403652 . + . ID=exon-CJ235_02025-1;Parent=rna-CJ235_02025;anticodon=(pos:403614..403616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_02025;product=tRNA-Arg PNGG01000001.1 Genbank gene 403853 404065 . - . ID=gene-CJ235_02030;Name=CJ235_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02030 PNGG01000001.1 Protein Homology CDS 403853 404065 . - 0 ID=cds-PMC20473.1;Parent=gene-CJ235_02030;Dbxref=NCBI_GP:PMC20473.1;Name=PMC20473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474889.1;locus_tag=CJ235_02030;product=hypothetical protein;protein_id=PMC20473.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 404084 404536 . + . ID=gene-CJ235_02035;Name=CJ235_02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_02035;pseudo=true PNGG01000001.1 Protein Homology CDS 404084 404536 . + 0 ID=cds-CJ235_02035;Parent=gene-CJ235_02035;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805469.1;locus_tag=CJ235_02035;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 404813 405025 . - . ID=gene-CJ235_02040;Name=CJ235_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02040 PNGG01000001.1 Protein Homology CDS 404813 405025 . - 0 ID=cds-PMC20474.1;Parent=gene-CJ235_02040;Dbxref=NCBI_GP:PMC20474.1;Name=PMC20474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474889.1;locus_tag=CJ235_02040;product=hypothetical protein;protein_id=PMC20474.1;transl_table=11 PNGG01000001.1 Genbank gene 405461 406825 . - . ID=gene-CJ235_02045;Name=CJ235_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02045 PNGG01000001.1 Protein Homology CDS 405461 406825 . - 0 ID=cds-PMC20475.1;Parent=gene-CJ235_02045;Dbxref=NCBI_GP:PMC20475.1;Name=PMC20475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978106.1;locus_tag=CJ235_02045;product=autolysin;protein_id=PMC20475.1;transl_table=11 PNGG01000001.1 Genbank gene 407318 407824 . - . ID=gene-CJ235_02050;Name=CJ235_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02050 PNGG01000001.1 Protein Homology CDS 407318 407824 . - 0 ID=cds-PMC20476.1;Parent=gene-CJ235_02050;Dbxref=NCBI_GP:PMC20476.1;Name=PMC20476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382067.1;locus_tag=CJ235_02050;product=phage holin;protein_id=PMC20476.1;transl_table=11 PNGG01000001.1 Genbank gene 407871 408269 . - . ID=gene-CJ235_02055;Name=CJ235_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02055 PNGG01000001.1 Protein Homology CDS 407871 408269 . - 0 ID=cds-PMC20477.1;Parent=gene-CJ235_02055;Dbxref=NCBI_GP:PMC20477.1;Name=PMC20477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469695.1;locus_tag=CJ235_02055;product=hypothetical protein;protein_id=PMC20477.1;transl_table=11 PNGG01000001.1 Genbank gene 408256 408678 . - . ID=gene-CJ235_02060;Name=CJ235_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02060 PNGG01000001.1 Protein Homology CDS 408256 408678 . - 0 ID=cds-PMC20478.1;Parent=gene-CJ235_02060;Dbxref=NCBI_GP:PMC20478.1;Name=PMC20478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899772.1;locus_tag=CJ235_02060;product=hypothetical protein;protein_id=PMC20478.1;transl_table=11 PNGG01000001.1 Genbank gene 408717 408869 . - . ID=gene-CJ235_02065;Name=CJ235_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02065 PNGG01000001.1 Protein Homology CDS 408717 408869 . - 0 ID=cds-PMC20479.1;Parent=gene-CJ235_02065;Dbxref=NCBI_GP:PMC20479.1;Name=PMC20479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469697.1;locus_tag=CJ235_02065;product=XkdX family protein;protein_id=PMC20479.1;transl_table=11 PNGG01000001.1 Genbank gene 408871 409374 . - . ID=gene-CJ235_02070;Name=CJ235_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02070 PNGG01000001.1 GeneMarkS+ CDS 408871 409374 . - 0 ID=cds-PMC20480.1;Parent=gene-CJ235_02070;Dbxref=NCBI_GP:PMC20480.1;Name=PMC20480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02070;product=hypothetical protein;protein_id=PMC20480.1;transl_table=11 PNGG01000001.1 Genbank gene 409387 410823 . - . ID=gene-CJ235_02075;Name=CJ235_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02075 PNGG01000001.1 Protein Homology CDS 409387 410823 . - 0 ID=cds-PMC20481.1;Parent=gene-CJ235_02075;Dbxref=NCBI_GP:PMC20481.1;Name=PMC20481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10651.7;locus_tag=CJ235_02075;product=DUF2479 domain-containing protein;protein_id=PMC20481.1;transl_table=11 PNGG01000001.1 Genbank gene 410823 412886 . - . ID=gene-CJ235_02080;Name=CJ235_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02080 PNGG01000001.1 Protein Homology CDS 410823 412886 . - 0 ID=cds-PMC20482.1;Parent=gene-CJ235_02080;Dbxref=NCBI_GP:PMC20482.1;Name=PMC20482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13884.4;locus_tag=CJ235_02080;product=hypothetical protein;protein_id=PMC20482.1;transl_table=11 PNGG01000001.1 Genbank gene 412901 413425 . - . ID=gene-CJ235_02085;Name=CJ235_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02085 PNGG01000001.1 GeneMarkS+ CDS 412901 413425 . - 0 ID=cds-PMC20483.1;Parent=gene-CJ235_02085;Dbxref=NCBI_GP:PMC20483.1;Name=PMC20483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02085;product=hypothetical protein;protein_id=PMC20483.1;transl_table=11 PNGG01000001.1 Genbank gene 413432 415963 . - . ID=gene-CJ235_02090;Name=CJ235_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02090 PNGG01000001.1 Protein Homology CDS 413432 415963 . - 0 ID=cds-PMC20484.1;Parent=gene-CJ235_02090;Dbxref=NCBI_GP:PMC20484.1;Name=PMC20484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498290.1;locus_tag=CJ235_02090;product=hypothetical protein;protein_id=PMC20484.1;transl_table=11 PNGG01000001.1 Genbank gene 415973 416806 . - . ID=gene-CJ235_02095;Name=CJ235_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02095 PNGG01000001.1 Protein Homology CDS 415973 416806 . - 0 ID=cds-PMC20485.1;Parent=gene-CJ235_02095;Dbxref=NCBI_GP:PMC20485.1;Name=PMC20485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064955.1;locus_tag=CJ235_02095;product=phage tail protein;protein_id=PMC20485.1;transl_table=11 PNGG01000001.1 Genbank gene 416806 421485 . - . ID=gene-CJ235_02100;Name=CJ235_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02100 PNGG01000001.1 Protein Homology CDS 416806 421485 . - 0 ID=cds-PMC20486.1;Parent=gene-CJ235_02100;Dbxref=NCBI_GP:PMC20486.1;Name=PMC20486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469704.1;locus_tag=CJ235_02100;product=phage tail tape measure protein;protein_id=PMC20486.1;transl_table=11 PNGG01000001.1 Genbank gene 421699 422061 . - . ID=gene-CJ235_02105;Name=CJ235_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02105 PNGG01000001.1 Protein Homology CDS 421699 422061 . - 0 ID=cds-PMC20487.1;Parent=gene-CJ235_02105;Dbxref=NCBI_GP:PMC20487.1;Name=PMC20487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453522.1;locus_tag=CJ235_02105;product=hypothetical protein;protein_id=PMC20487.1;transl_table=11 PNGG01000001.1 Genbank gene 422131 422610 . - . ID=gene-CJ235_02110;Name=CJ235_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02110 PNGG01000001.1 Protein Homology CDS 422131 422610 . - 0 ID=cds-PMC20488.1;Parent=gene-CJ235_02110;Dbxref=NCBI_GP:PMC20488.1;Name=PMC20488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125171.1;locus_tag=CJ235_02110;product=phage tail protein;protein_id=PMC20488.1;transl_table=11 PNGG01000001.1 Genbank gene 422699 423328 . - . ID=gene-CJ235_02115;Name=CJ235_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02115 PNGG01000001.1 Protein Homology CDS 422699 423328 . - 0 ID=cds-PMC20489.1;Parent=gene-CJ235_02115;Dbxref=NCBI_GP:PMC20489.1;Name=PMC20489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503472.1;locus_tag=CJ235_02115;product=phage tail protein;protein_id=PMC20489.1;transl_table=11 PNGG01000001.1 Genbank gene 423341 423745 . - . ID=gene-CJ235_02120;Name=CJ235_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02120 PNGG01000001.1 Protein Homology CDS 423341 423745 . - 0 ID=cds-PMC20490.1;Parent=gene-CJ235_02120;Dbxref=NCBI_GP:PMC20490.1;Name=PMC20490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453525.1;locus_tag=CJ235_02120;product=hypothetical protein;protein_id=PMC20490.1;transl_table=11 PNGG01000001.1 Genbank gene 423750 424016 . - . ID=gene-CJ235_02125;Name=CJ235_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02125 PNGG01000001.1 Protein Homology CDS 423750 424016 . - 0 ID=cds-PMC20810.1;Parent=gene-CJ235_02125;Dbxref=NCBI_GP:PMC20810.1;Name=PMC20810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453526.1;locus_tag=CJ235_02125;product=hypothetical protein;protein_id=PMC20810.1;transl_table=11 PNGG01000001.1 Genbank gene 424151 424480 . - . ID=gene-CJ235_02130;Name=CJ235_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02130 PNGG01000001.1 Protein Homology CDS 424151 424480 . - 0 ID=cds-PMC20491.1;Parent=gene-CJ235_02130;Dbxref=NCBI_GP:PMC20491.1;Name=PMC20491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468167.1;locus_tag=CJ235_02130;product=hypothetical protein;protein_id=PMC20491.1;transl_table=11 PNGG01000001.1 Genbank gene 424467 424799 . - . ID=gene-CJ235_02135;Name=CJ235_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02135 PNGG01000001.1 Protein Homology CDS 424467 424799 . - 0 ID=cds-PMC20492.1;Parent=gene-CJ235_02135;Dbxref=NCBI_GP:PMC20492.1;Name=PMC20492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464452.1;locus_tag=CJ235_02135;product=phage gp6-like head-tail connector protein;protein_id=PMC20492.1;transl_table=11 PNGG01000001.1 Genbank gene 424871 426211 . - . ID=gene-CJ235_02140;Name=CJ235_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02140 PNGG01000001.1 Protein Homology CDS 424871 426211 . - 0 ID=cds-PMC20493.1;Parent=gene-CJ235_02140;Dbxref=NCBI_GP:PMC20493.1;Name=PMC20493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468122.1;locus_tag=CJ235_02140;product=phage major capsid protein;protein_id=PMC20493.1;transl_table=11 PNGG01000001.1 Genbank gene 426252 426806 . - . ID=gene-CJ235_02145;Name=CJ235_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02145 PNGG01000001.1 Protein Homology CDS 426252 426806 . - 0 ID=cds-PMC20494.1;Parent=gene-CJ235_02145;Dbxref=NCBI_GP:PMC20494.1;Name=PMC20494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469714.1;locus_tag=CJ235_02145;product=HK97 family phage prohead protease;protein_id=PMC20494.1;transl_table=11 PNGG01000001.1 Genbank gene 426799 428031 . - . ID=gene-CJ235_02150;Name=CJ235_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02150 PNGG01000001.1 Protein Homology CDS 426799 428031 . - 0 ID=cds-PMC20495.1;Parent=gene-CJ235_02150;Dbxref=NCBI_GP:PMC20495.1;Name=PMC20495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462634.1;locus_tag=CJ235_02150;product=phage portal protein;protein_id=PMC20495.1;transl_table=11 PNGG01000001.1 Genbank gene 428031 428222 . - . ID=gene-CJ235_02155;Name=CJ235_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02155 PNGG01000001.1 Protein Homology CDS 428031 428222 . - 0 ID=cds-PMC20496.1;Parent=gene-CJ235_02155;Dbxref=NCBI_GP:PMC20496.1;Name=PMC20496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462633.1;locus_tag=CJ235_02155;product=hypothetical protein;protein_id=PMC20496.1;transl_table=11 PNGG01000001.1 Genbank gene 428236 429990 . - . ID=gene-CJ235_02160;Name=CJ235_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02160 PNGG01000001.1 Protein Homology CDS 428236 429990 . - 0 ID=cds-PMC20497.1;Parent=gene-CJ235_02160;Dbxref=NCBI_GP:PMC20497.1;Name=PMC20497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499242.1;locus_tag=CJ235_02160;product=terminase large subunit;protein_id=PMC20497.1;transl_table=11 PNGG01000001.1 Genbank gene 429983 430468 . - . ID=gene-CJ235_02165;Name=CJ235_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02165 PNGG01000001.1 Protein Homology CDS 429983 430468 . - 0 ID=cds-PMC20498.1;Parent=gene-CJ235_02165;Dbxref=NCBI_GP:PMC20498.1;Name=PMC20498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464445.1;locus_tag=CJ235_02165;product=phage terminase small subunit P27 family;protein_id=PMC20498.1;transl_table=11 PNGG01000001.1 Genbank gene 430617 430967 . - . ID=gene-CJ235_02170;Name=CJ235_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02170 PNGG01000001.1 Protein Homology CDS 430617 430967 . - 0 ID=cds-PMC20499.1;Parent=gene-CJ235_02170;Dbxref=NCBI_GP:PMC20499.1;Name=PMC20499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504174.1;locus_tag=CJ235_02170;product=endonuclease;protein_id=PMC20499.1;transl_table=11 PNGG01000001.1 Genbank gene 431527 431943 . - . ID=gene-CJ235_02175;Name=CJ235_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02175 PNGG01000001.1 Protein Homology CDS 431527 431943 . - 0 ID=cds-PMC20500.1;Parent=gene-CJ235_02175;Dbxref=NCBI_GP:PMC20500.1;Name=PMC20500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175561.1;locus_tag=CJ235_02175;product=transcriptional regulator;protein_id=PMC20500.1;transl_table=11 PNGG01000001.1 Genbank gene 432186 432365 . - . ID=gene-CJ235_02180;Name=CJ235_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02180 PNGG01000001.1 Protein Homology CDS 432186 432365 . - 0 ID=cds-PMC20501.1;Parent=gene-CJ235_02180;Dbxref=NCBI_GP:PMC20501.1;Name=PMC20501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595244.1;locus_tag=CJ235_02180;product=transcriptional regulator;protein_id=PMC20501.1;transl_table=11 PNGG01000001.1 Genbank gene 432414 432839 . - . ID=gene-CJ235_02185;Name=CJ235_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02185 PNGG01000001.1 Protein Homology CDS 432414 432839 . - 0 ID=cds-PMC20502.1;Parent=gene-CJ235_02185;Dbxref=NCBI_GP:PMC20502.1;Name=PMC20502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064939.1;locus_tag=CJ235_02185;product=dUTP diphosphatase;protein_id=PMC20502.1;transl_table=11 PNGG01000001.1 Genbank gene 432840 433385 . - . ID=gene-CJ235_02190;Name=CJ235_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02190 PNGG01000001.1 Protein Homology CDS 432840 433385 . - 0 ID=cds-PMC20503.1;Parent=gene-CJ235_02190;Dbxref=NCBI_GP:PMC20503.1;Name=PMC20503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13392.4;locus_tag=CJ235_02190;product=hypothetical protein;protein_id=PMC20503.1;transl_table=11 PNGG01000001.1 Genbank gene 433387 433782 . - . ID=gene-CJ235_02195;Name=CJ235_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02195 PNGG01000001.1 Protein Homology CDS 433387 433782 . - 0 ID=cds-PMC20504.1;Parent=gene-CJ235_02195;Dbxref=NCBI_GP:PMC20504.1;Name=PMC20504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017864652.1;locus_tag=CJ235_02195;product=hypothetical protein;protein_id=PMC20504.1;transl_table=11 PNGG01000001.1 Genbank gene 433839 434036 . - . ID=gene-CJ235_02200;Name=CJ235_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02200 PNGG01000001.1 GeneMarkS+ CDS 433839 434036 . - 0 ID=cds-PMC20505.1;Parent=gene-CJ235_02200;Dbxref=NCBI_GP:PMC20505.1;Name=PMC20505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02200;product=hypothetical protein;protein_id=PMC20505.1;transl_table=11 PNGG01000001.1 Genbank gene 434039 434527 . - . ID=gene-CJ235_02205;Name=CJ235_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02205 PNGG01000001.1 Protein Homology CDS 434039 434527 . - 0 ID=cds-PMC20506.1;Parent=gene-CJ235_02205;Dbxref=NCBI_GP:PMC20506.1;Name=PMC20506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469776.1;locus_tag=CJ235_02205;product=hypothetical protein;protein_id=PMC20506.1;transl_table=11 PNGG01000001.1 Genbank gene 434520 434987 . - . ID=gene-CJ235_02210;Name=CJ235_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02210 PNGG01000001.1 Protein Homology CDS 434520 434987 . - 0 ID=cds-PMC20507.1;Parent=gene-CJ235_02210;Dbxref=NCBI_GP:PMC20507.1;Name=PMC20507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11753.6;locus_tag=CJ235_02210;product=hypothetical protein;protein_id=PMC20507.1;transl_table=11 PNGG01000001.1 Genbank gene 434984 435403 . - . ID=gene-CJ235_02215;Name=CJ235_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02215 PNGG01000001.1 GeneMarkS+ CDS 434984 435403 . - 0 ID=cds-PMC20508.1;Parent=gene-CJ235_02215;Dbxref=NCBI_GP:PMC20508.1;Name=PMC20508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02215;product=hypothetical protein;protein_id=PMC20508.1;transl_table=11 PNGG01000001.1 Genbank gene 435415 435630 . - . ID=gene-CJ235_02220;Name=CJ235_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02220 PNGG01000001.1 GeneMarkS+ CDS 435415 435630 . - 0 ID=cds-PMC20509.1;Parent=gene-CJ235_02220;Dbxref=NCBI_GP:PMC20509.1;Name=PMC20509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02220;product=hypothetical protein;protein_id=PMC20509.1;transl_table=11 PNGG01000001.1 Genbank gene 435635 435946 . - . ID=gene-CJ235_02225;Name=CJ235_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02225 PNGG01000001.1 Protein Homology CDS 435635 435946 . - 0 ID=cds-PMC20510.1;Parent=gene-CJ235_02225;Dbxref=NCBI_GP:PMC20510.1;Name=PMC20510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452317.1;locus_tag=CJ235_02225;product=VRR-NUC domain-containing protein;protein_id=PMC20510.1;transl_table=11 PNGG01000001.1 Genbank gene 435939 436163 . - . ID=gene-CJ235_02230;Name=CJ235_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02230 PNGG01000001.1 GeneMarkS+ CDS 435939 436163 . - 0 ID=cds-PMC20511.1;Parent=gene-CJ235_02230;Dbxref=NCBI_GP:PMC20511.1;Name=PMC20511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02230;product=hypothetical protein;protein_id=PMC20511.1;transl_table=11 PNGG01000001.1 Genbank gene 436462 438804 . - . ID=gene-CJ235_02235;Name=CJ235_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02235 PNGG01000001.1 Protein Homology CDS 436462 438804 . - 0 ID=cds-PMC20512.1;Parent=gene-CJ235_02235;Dbxref=NCBI_GP:PMC20512.1;Name=PMC20512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003778241.1;locus_tag=CJ235_02235;product=DNA primase;protein_id=PMC20512.1;transl_table=11 PNGG01000001.1 Genbank gene 438782 439351 . - . ID=gene-CJ235_02240;Name=CJ235_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02240 PNGG01000001.1 Protein Homology CDS 438782 439351 . - 0 ID=cds-PMC20513.1;Parent=gene-CJ235_02240;Dbxref=NCBI_GP:PMC20513.1;Name=PMC20513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015474440.1;locus_tag=CJ235_02240;product=hypothetical protein;protein_id=PMC20513.1;transl_table=11 PNGG01000001.1 Genbank gene 439371 440783 . - . ID=gene-CJ235_02245;Name=CJ235_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02245 PNGG01000001.1 Protein Homology CDS 439371 440783 . - 0 ID=cds-PMC20514.1;Parent=gene-CJ235_02245;Dbxref=NCBI_GP:PMC20514.1;Name=PMC20514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898308.1;locus_tag=CJ235_02245;product=helicase;protein_id=PMC20514.1;transl_table=11 PNGG01000001.1 Genbank gene 440776 441465 . - . ID=gene-CJ235_02250;Name=CJ235_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02250 PNGG01000001.1 Protein Homology CDS 440776 441465 . - 0 ID=cds-PMC20515.1;Parent=gene-CJ235_02250;Dbxref=NCBI_GP:PMC20515.1;Name=PMC20515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898309.1;locus_tag=CJ235_02250;product=DNA-binding protein;protein_id=PMC20515.1;transl_table=11 PNGG01000001.1 Genbank gene 441467 441952 . - . ID=gene-CJ235_02255;Name=CJ235_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02255 PNGG01000001.1 Protein Homology CDS 441467 441952 . - 0 ID=cds-PMC20516.1;Parent=gene-CJ235_02255;Dbxref=NCBI_GP:PMC20516.1;Name=PMC20516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442294.1;locus_tag=CJ235_02255;product=hypothetical protein;protein_id=PMC20516.1;transl_table=11 PNGG01000001.1 Genbank gene 442205 442516 . - . ID=gene-CJ235_02260;Name=CJ235_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02260 PNGG01000001.1 Protein Homology CDS 442205 442516 . - 0 ID=cds-PMC20517.1;Parent=gene-CJ235_02260;Dbxref=NCBI_GP:PMC20517.1;Name=PMC20517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276075.1;locus_tag=CJ235_02260;product=DUF771 domain-containing protein;protein_id=PMC20517.1;transl_table=11 PNGG01000001.1 Genbank gene 442579 443235 . + . ID=gene-CJ235_02265;Name=CJ235_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02265 PNGG01000001.1 Protein Homology CDS 442579 443235 . + 0 ID=cds-PMC20518.1;Parent=gene-CJ235_02265;Dbxref=NCBI_GP:PMC20518.1;Name=PMC20518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474298.1;locus_tag=CJ235_02265;product=hypothetical protein;protein_id=PMC20518.1;transl_table=11 PNGG01000001.1 Genbank gene 443326 443574 . - . ID=gene-CJ235_02270;Name=CJ235_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02270 PNGG01000001.1 Protein Homology CDS 443326 443574 . - 0 ID=cds-PMC20519.1;Parent=gene-CJ235_02270;Dbxref=NCBI_GP:PMC20519.1;Name=PMC20519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272858.1;locus_tag=CJ235_02270;product=XRE family transcriptional regulator;protein_id=PMC20519.1;transl_table=11 PNGG01000001.1 Genbank gene 443737 444060 . + . ID=gene-CJ235_02275;Name=CJ235_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02275 PNGG01000001.1 Protein Homology CDS 443737 444060 . + 0 ID=cds-PMC20520.1;Parent=gene-CJ235_02275;Dbxref=NCBI_GP:PMC20520.1;Name=PMC20520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978283.1;locus_tag=CJ235_02275;product=XRE family transcriptional regulator;protein_id=PMC20520.1;transl_table=11 PNGG01000001.1 Genbank gene 444073 444537 . + . ID=gene-CJ235_02280;Name=CJ235_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02280 PNGG01000001.1 Protein Homology CDS 444073 444537 . + 0 ID=cds-PMC20521.1;Parent=gene-CJ235_02280;Dbxref=NCBI_GP:PMC20521.1;Name=PMC20521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469462.1;locus_tag=CJ235_02280;product=toxin;protein_id=PMC20521.1;transl_table=11 PNGG01000001.1 Genbank gene 444564 444746 . + . ID=gene-CJ235_02285;Name=CJ235_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02285 PNGG01000001.1 Protein Homology CDS 444564 444746 . + 0 ID=cds-PMC20522.1;Parent=gene-CJ235_02285;Dbxref=NCBI_GP:PMC20522.1;Name=PMC20522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012991013.1;locus_tag=CJ235_02285;product=hypothetical protein;protein_id=PMC20522.1;transl_table=11 PNGG01000001.1 Genbank gene 444750 445115 . + . ID=gene-CJ235_02290;Name=CJ235_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02290 PNGG01000001.1 Protein Homology CDS 444750 445115 . + 0 ID=cds-PMC20523.1;Parent=gene-CJ235_02290;Dbxref=NCBI_GP:PMC20523.1;Name=PMC20523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009558553.1;locus_tag=CJ235_02290;product=hypothetical protein;protein_id=PMC20523.1;transl_table=11 PNGG01000001.1 Genbank gene 445176 446120 . + . ID=gene-CJ235_02295;Name=CJ235_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02295 PNGG01000001.1 Protein Homology CDS 445176 446120 . + 0 ID=cds-PMC20524.1;Parent=gene-CJ235_02295;Dbxref=NCBI_GP:PMC20524.1;Name=PMC20524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009495548.1;locus_tag=CJ235_02295;product=DNA (cytosine-5-)-methyltransferase;protein_id=PMC20524.1;transl_table=11 PNGG01000001.1 Genbank gene 446093 446695 . + . ID=gene-CJ235_02300;Name=CJ235_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02300 PNGG01000001.1 Protein Homology CDS 446093 446695 . + 0 ID=cds-PMC20525.1;Parent=gene-CJ235_02300;Dbxref=NCBI_GP:PMC20525.1;Name=PMC20525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005642017.1;locus_tag=CJ235_02300;product=hypothetical protein;protein_id=PMC20525.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 446830 447081 . + . ID=gene-CJ235_02305;Name=CJ235_02305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_02305;pseudo=true PNGG01000001.1 Protein Homology CDS 446830 447081 . + 0 ID=cds-CJ235_02305;Parent=gene-CJ235_02305;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500138.1;locus_tag=CJ235_02305;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 447135 448172 . + . ID=gene-CJ235_02310;Name=CJ235_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02310 PNGG01000001.1 Protein Homology CDS 447135 448172 . + 0 ID=cds-PMC20526.1;Parent=gene-CJ235_02310;Dbxref=NCBI_GP:PMC20526.1;Name=PMC20526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512109.1;locus_tag=CJ235_02310;product=site-specific integrase;protein_id=PMC20526.1;transl_table=11 PNGG01000001.1 Genbank gene 448487 449509 . + . ID=gene-CJ235_02315;Name=CJ235_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02315 PNGG01000001.1 GeneMarkS+ CDS 448487 449509 . + 0 ID=cds-PMC20527.1;Parent=gene-CJ235_02315;Dbxref=NCBI_GP:PMC20527.1;Name=PMC20527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02315;product=hypothetical protein;protein_id=PMC20527.1;transl_table=11 PNGG01000001.1 Genbank gene 449640 450536 . - . ID=gene-CJ235_02320;Name=CJ235_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02320 PNGG01000001.1 Protein Homology CDS 449640 450536 . - 0 ID=cds-PMC20528.1;Parent=gene-CJ235_02320;Dbxref=NCBI_GP:PMC20528.1;Name=PMC20528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472933.1;locus_tag=CJ235_02320;product=TIGR01777 family protein;protein_id=PMC20528.1;transl_table=11 PNGG01000001.1 Genbank gene 451084 451941 . + . ID=gene-CJ235_02325;Name=CJ235_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02325 PNGG01000001.1 GeneMarkS+ CDS 451084 451941 . + 0 ID=cds-PMC20529.1;Parent=gene-CJ235_02325;Dbxref=NCBI_GP:PMC20529.1;Name=PMC20529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02325;product=hypothetical protein;protein_id=PMC20529.1;transl_table=11 PNGG01000001.1 Genbank gene 451998 452180 . - . ID=gene-CJ235_02330;Name=CJ235_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02330 PNGG01000001.1 Protein Homology CDS 451998 452180 . - 0 ID=cds-PMC20530.1;Parent=gene-CJ235_02330;Dbxref=NCBI_GP:PMC20530.1;Name=PMC20530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456691.1;locus_tag=CJ235_02330;product=hypothetical protein;protein_id=PMC20530.1;transl_table=11 PNGG01000001.1 Genbank gene 452283 453182 . - . ID=gene-CJ235_02335;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CJ235_02335 PNGG01000001.1 Protein Homology CDS 452283 453182 . - 0 ID=cds-PMC20531.1;Parent=gene-CJ235_02335;Dbxref=NCBI_GP:PMC20531.1;Name=PMC20531.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636553.1;locus_tag=CJ235_02335;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=PMC20531.1;transl_table=11 PNGG01000001.1 Genbank gene 453198 453875 . - . ID=gene-CJ235_02340;Name=CJ235_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02340 PNGG01000001.1 Protein Homology CDS 453198 453875 . - 0 ID=cds-PMC20532.1;Parent=gene-CJ235_02340;Dbxref=NCBI_GP:PMC20532.1;Name=PMC20532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723351.1;locus_tag=CJ235_02340;product=serine dehydratase;protein_id=PMC20532.1;transl_table=11 PNGG01000001.1 Genbank gene 453893 454927 . - . ID=gene-CJ235_02345;Name=CJ235_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02345 PNGG01000001.1 Protein Homology CDS 453893 454927 . - 0 ID=cds-PMC20533.1;Parent=gene-CJ235_02345;Dbxref=NCBI_GP:PMC20533.1;Name=PMC20533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723352.1;locus_tag=CJ235_02345;product=transcriptional regulator;protein_id=PMC20533.1;transl_table=11 PNGG01000001.1 Genbank gene 455284 455484 . - . ID=gene-CJ235_02350;Name=CJ235_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02350 PNGG01000001.1 Protein Homology CDS 455284 455484 . - 0 ID=cds-PMC20534.1;Parent=gene-CJ235_02350;Dbxref=NCBI_GP:PMC20534.1;Name=PMC20534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498936.1;locus_tag=CJ235_02350;product=hypothetical protein;protein_id=PMC20534.1;transl_table=11 PNGG01000001.1 Genbank gene 455746 457386 . - . ID=gene-CJ235_02355;Name=CJ235_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02355 PNGG01000001.1 Protein Homology CDS 455746 457386 . - 0 ID=cds-PMC20535.1;Parent=gene-CJ235_02355;Dbxref=NCBI_GP:PMC20535.1;Name=PMC20535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506487.1;locus_tag=CJ235_02355;product=pyruvate decarboxylase;protein_id=PMC20535.1;transl_table=11 PNGG01000001.1 Genbank gene 457639 458115 . - . ID=gene-CJ235_02360;Name=CJ235_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02360 PNGG01000001.1 Protein Homology CDS 457639 458115 . - 0 ID=cds-PMC20536.1;Parent=gene-CJ235_02360;Dbxref=NCBI_GP:PMC20536.1;Name=PMC20536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454748.1;locus_tag=CJ235_02360;product=MarR family transcriptional regulator;protein_id=PMC20536.1;transl_table=11 PNGG01000001.1 Genbank gene 458264 458836 . + . ID=gene-CJ235_02365;Name=CJ235_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02365 PNGG01000001.1 Protein Homology CDS 458264 458836 . + 0 ID=cds-PMC20537.1;Parent=gene-CJ235_02365;Dbxref=NCBI_GP:PMC20537.1;Name=PMC20537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472920.1;locus_tag=CJ235_02365;product=LysE family translocator;protein_id=PMC20537.1;transl_table=11 PNGG01000001.1 Genbank gene 458855 459634 . + . ID=gene-CJ235_02370;Name=CJ235_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02370 PNGG01000001.1 Protein Homology CDS 458855 459634 . + 0 ID=cds-PMC20538.1;Parent=gene-CJ235_02370;Dbxref=NCBI_GP:PMC20538.1;Name=PMC20538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472908.1;locus_tag=CJ235_02370;product=AraC family transcriptional regulator;protein_id=PMC20538.1;transl_table=11 PNGG01000001.1 Genbank gene 459766 460710 . - . ID=gene-CJ235_02375;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CJ235_02375 PNGG01000001.1 Protein Homology CDS 459766 460710 . - 0 ID=cds-PMC20539.1;Parent=gene-CJ235_02375;Dbxref=NCBI_GP:PMC20539.1;Name=PMC20539.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764105.1;locus_tag=CJ235_02375;product=DNA-binding protein WhiA;protein_id=PMC20539.1;transl_table=11 PNGG01000001.1 Genbank gene 460744 461745 . - . ID=gene-CJ235_02380;Name=CJ235_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02380 PNGG01000001.1 Protein Homology CDS 460744 461745 . - 0 ID=cds-PMC20540.1;Parent=gene-CJ235_02380;Dbxref=NCBI_GP:PMC20540.1;Name=PMC20540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303621.1;locus_tag=CJ235_02380;product=YvcK family protein;protein_id=PMC20540.1;transl_table=11 PNGG01000001.1 Genbank gene 461748 462653 . - . ID=gene-CJ235_02385;Name=CJ235_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02385 PNGG01000001.1 Protein Homology CDS 461748 462653 . - 0 ID=cds-PMC20541.1;Parent=gene-CJ235_02385;Dbxref=NCBI_GP:PMC20541.1;Name=PMC20541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466712.1;locus_tag=CJ235_02385;product=RNase adapter RapZ;protein_id=PMC20541.1;transl_table=11 PNGG01000001.1 Genbank gene 462999 463943 . - . ID=gene-CJ235_02390;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CJ235_02390 PNGG01000001.1 Protein Homology CDS 462999 463943 . - 0 ID=cds-PMC20542.1;Parent=gene-CJ235_02390;Dbxref=NCBI_GP:PMC20542.1;Name=PMC20542.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469483.1;locus_tag=CJ235_02390;product=thioredoxin-disulfide reductase;protein_id=PMC20542.1;transl_table=11 PNGG01000001.1 Genbank gene 464008 465444 . - . ID=gene-CJ235_02395;Name=CJ235_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02395 PNGG01000001.1 Protein Homology CDS 464008 465444 . - 0 ID=cds-PMC20543.1;Parent=gene-CJ235_02395;Dbxref=NCBI_GP:PMC20543.1;Name=PMC20543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483896.1;locus_tag=CJ235_02395;product=hypothetical protein;protein_id=PMC20543.1;transl_table=11 PNGG01000001.1 Genbank gene 465465 465944 . - . ID=gene-CJ235_02400;Name=CJ235_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02400 PNGG01000001.1 Protein Homology CDS 465465 465944 . - 0 ID=cds-PMC20544.1;Parent=gene-CJ235_02400;Dbxref=NCBI_GP:PMC20544.1;Name=PMC20544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472899.1;locus_tag=CJ235_02400;product=acyltransferase;protein_id=PMC20544.1;transl_table=11 PNGG01000001.1 Genbank gene 465944 466789 . - . ID=gene-CJ235_02405;Name=CJ235_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02405 PNGG01000001.1 Protein Homology CDS 465944 466789 . - 0 ID=cds-PMC20545.1;Parent=gene-CJ235_02405;Dbxref=NCBI_GP:PMC20545.1;Name=PMC20545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472921.1;locus_tag=CJ235_02405;product=prolipoprotein diacylglyceryl transferase;protein_id=PMC20545.1;transl_table=11 PNGG01000001.1 Genbank gene 466793 467734 . - . ID=gene-CJ235_02410;Name=CJ235_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02410 PNGG01000001.1 Protein Homology CDS 466793 467734 . - 0 ID=cds-PMC20546.1;Parent=gene-CJ235_02410;Dbxref=NCBI_GP:PMC20546.1;Name=PMC20546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899667.1;locus_tag=CJ235_02410;product=HPr kinase/phosphorylase;protein_id=PMC20546.1;transl_table=11 PNGG01000001.1 Genbank gene 468233 471067 . - . ID=gene-CJ235_02415;Name=CJ235_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02415 PNGG01000001.1 Protein Homology CDS 468233 471067 . - 0 ID=cds-PMC20547.1;Parent=gene-CJ235_02415;Dbxref=NCBI_GP:PMC20547.1;Name=PMC20547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472913.1;locus_tag=CJ235_02415;product=excinuclease ABC subunit UvrA;protein_id=PMC20547.1;transl_table=11 PNGG01000001.1 Genbank gene 471073 473055 . - . ID=gene-CJ235_02420;Name=CJ235_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02420 PNGG01000001.1 Protein Homology CDS 471073 473055 . - 0 ID=cds-PMC20548.1;Parent=gene-CJ235_02420;Dbxref=NCBI_GP:PMC20548.1;Name=PMC20548.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508272.1;locus_tag=CJ235_02420;product=excinuclease ABC subunit UvrB;protein_id=PMC20548.1;transl_table=11 PNGG01000001.1 Genbank gene 473428 473661 . - . ID=gene-CJ235_02425;Name=CJ235_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02425 PNGG01000001.1 Protein Homology CDS 473428 473661 . - 0 ID=cds-PMC20549.1;Parent=gene-CJ235_02425;Dbxref=NCBI_GP:PMC20549.1;Name=PMC20549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499332.1;locus_tag=CJ235_02425;product=DUF2198 domain-containing protein;protein_id=PMC20549.1;transl_table=11 PNGG01000001.1 Genbank gene 474001 474993 . - . ID=gene-CJ235_02430;Name=CJ235_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02430 PNGG01000001.1 Protein Homology CDS 474001 474993 . - 0 ID=cds-PMC20550.1;Parent=gene-CJ235_02430;Dbxref=NCBI_GP:PMC20550.1;Name=PMC20550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508275.1;locus_tag=CJ235_02430;product=LysM peptidoglycan-binding domain-containing protein;protein_id=PMC20550.1;transl_table=11 PNGG01000001.1 Genbank gene 475483 476596 . - . ID=gene-CJ235_02435;Name=CJ235_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02435 PNGG01000001.1 Protein Homology CDS 476525 476596 . - 0 ID=cds-PMC20551.1;Parent=gene-CJ235_02435;Dbxref=NCBI_GP:PMC20551.1;Name=PMC20551.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=CJ235_02435;product=peptide chain release factor 2;protein_id=PMC20551.1;transl_table=11 PNGG01000001.1 Protein Homology CDS 475483 476523 . - 0 ID=cds-PMC20551.1;Parent=gene-CJ235_02435;Dbxref=NCBI_GP:PMC20551.1;Name=PMC20551.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=CJ235_02435;product=peptide chain release factor 2;protein_id=PMC20551.1;transl_table=11 PNGG01000001.1 Genbank gene 476787 479318 . - . ID=gene-CJ235_02440;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CJ235_02440 PNGG01000001.1 Protein Homology CDS 476787 479318 . - 0 ID=cds-PMC20552.1;Parent=gene-CJ235_02440;Dbxref=NCBI_GP:PMC20552.1;Name=PMC20552.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303631.1;locus_tag=CJ235_02440;product=preprotein translocase subunit SecA;protein_id=PMC20552.1;transl_table=11 PNGG01000001.1 Genbank gene 479778 480362 . - . ID=gene-CJ235_02445;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CJ235_02445 PNGG01000001.1 Protein Homology CDS 479778 480362 . - 0 ID=cds-PMC20553.1;Parent=gene-CJ235_02445;Dbxref=NCBI_GP:PMC20553.1;Name=PMC20553.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450920.1;locus_tag=CJ235_02445;product=ribosome-associated translation inhibitor RaiA;protein_id=PMC20553.1;transl_table=11 PNGG01000001.1 Genbank gene 480429 481115 . - . ID=gene-CJ235_02450;Name=CJ235_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02450 PNGG01000001.1 Protein Homology CDS 480429 481115 . - 0 ID=cds-PMC20554.1;Parent=gene-CJ235_02450;Dbxref=NCBI_GP:PMC20554.1;Name=PMC20554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470978.1;locus_tag=CJ235_02450;product=ComF family protein;protein_id=PMC20554.1;transl_table=11 PNGG01000001.1 Genbank gene 481108 482430 . - . ID=gene-CJ235_02455;Name=CJ235_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02455 PNGG01000001.1 Protein Homology CDS 481108 482430 . - 0 ID=cds-PMC20555.1;Parent=gene-CJ235_02455;Dbxref=NCBI_GP:PMC20555.1;Name=PMC20555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433160.1;locus_tag=CJ235_02455;product=DNA/RNA helicase;protein_id=PMC20555.1;transl_table=11 PNGG01000001.1 Genbank gene 482573 483436 . - . ID=gene-CJ235_02460;Name=CJ235_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02460 PNGG01000001.1 Protein Homology CDS 482573 483436 . - 0 ID=cds-PMC20556.1;Parent=gene-CJ235_02460;Dbxref=NCBI_GP:PMC20556.1;Name=PMC20556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467468.1;locus_tag=CJ235_02460;product=DegV family protein;protein_id=PMC20556.1;transl_table=11 PNGG01000001.1 Genbank gene 483664 484302 . + . ID=gene-CJ235_02465;Name=CJ235_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02465 PNGG01000001.1 Protein Homology CDS 483664 484302 . + 0 ID=cds-PMC20557.1;Parent=gene-CJ235_02465;Dbxref=NCBI_GP:PMC20557.1;Name=PMC20557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470982.1;locus_tag=CJ235_02465;product=YigZ family protein;protein_id=PMC20557.1;transl_table=11 PNGG01000001.1 Genbank gene 484428 485486 . - . ID=gene-CJ235_02470;Name=CJ235_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02470 PNGG01000001.1 Protein Homology CDS 484428 485486 . - 0 ID=cds-PMC20558.1;Parent=gene-CJ235_02470;Dbxref=NCBI_GP:PMC20558.1;Name=PMC20558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469500.1;locus_tag=CJ235_02470;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=PMC20558.1;transl_table=11 PNGG01000001.1 Genbank gene 486072 487142 . + . ID=gene-CJ235_02475;Name=CJ235_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02475 PNGG01000001.1 Protein Homology CDS 486072 487142 . + 0 ID=cds-PMC20559.1;Parent=gene-CJ235_02475;Dbxref=NCBI_GP:PMC20559.1;Name=PMC20559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303636.1;locus_tag=CJ235_02475;product=GGDEF domain-containing protein;protein_id=PMC20559.1;transl_table=11 PNGG01000001.1 Genbank gene 487418 488182 . + . ID=gene-CJ235_02480;Name=CJ235_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02480 PNGG01000001.1 Protein Homology CDS 487418 488182 . + 0 ID=cds-PMC20560.1;Parent=gene-CJ235_02480;Dbxref=NCBI_GP:PMC20560.1;Name=PMC20560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483914.1;locus_tag=CJ235_02480;product=threonine/serine exporter;protein_id=PMC20560.1;transl_table=11 PNGG01000001.1 Genbank gene 488204 488698 . + . ID=gene-CJ235_02485;Name=CJ235_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02485 PNGG01000001.1 Protein Homology CDS 488204 488698 . + 0 ID=cds-PMC20811.1;Parent=gene-CJ235_02485;Dbxref=NCBI_GP:PMC20811.1;Name=PMC20811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764081.1;locus_tag=CJ235_02485;product=hypothetical protein;protein_id=PMC20811.1;transl_table=11 PNGG01000001.1 Genbank gene 489039 490283 . + . ID=gene-CJ235_02490;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CJ235_02490 PNGG01000001.1 Protein Homology CDS 489039 490283 . + 0 ID=cds-PMC20561.1;Parent=gene-CJ235_02490;Dbxref=NCBI_GP:PMC20561.1;Name=PMC20561.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471801.1;locus_tag=CJ235_02490;product=peptidase T;protein_id=PMC20561.1;transl_table=11 PNGG01000001.1 Genbank gene 490382 491503 . - . ID=gene-CJ235_02495;Name=CJ235_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02495 PNGG01000001.1 Protein Homology CDS 490382 491503 . - 0 ID=cds-PMC20562.1;Parent=gene-CJ235_02495;Dbxref=NCBI_GP:PMC20562.1;Name=PMC20562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471782.1;locus_tag=CJ235_02495;product=glycerate kinase;protein_id=PMC20562.1;transl_table=11 PNGG01000001.1 Genbank gene 491801 492121 . - . ID=gene-CJ235_02500;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CJ235_02500 PNGG01000001.1 Protein Homology CDS 491801 492121 . - 0 ID=cds-PMC20563.1;Parent=gene-CJ235_02500;Dbxref=NCBI_GP:PMC20563.1;Name=PMC20563.1;gbkey=CDS;gene=ytxJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764078.1;locus_tag=CJ235_02500;product=bacillithiol system redox-active protein YtxJ;protein_id=PMC20563.1;transl_table=11 PNGG01000001.1 Genbank gene 492329 493213 . - . ID=gene-CJ235_02505;Name=CJ235_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02505 PNGG01000001.1 Protein Homology CDS 492329 493213 . - 0 ID=cds-PMC20564.1;Parent=gene-CJ235_02505;Dbxref=NCBI_GP:PMC20564.1;Name=PMC20564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930970.1;locus_tag=CJ235_02505;product=EMYY motif lipoprotein;protein_id=PMC20564.1;transl_table=11 PNGG01000001.1 Genbank gene 493328 493858 . + . ID=gene-CJ235_02510;Name=CJ235_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02510 PNGG01000001.1 Protein Homology CDS 493328 493858 . + 0 ID=cds-PMC20565.1;Parent=gene-CJ235_02510;Dbxref=NCBI_GP:PMC20565.1;Name=PMC20565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471792.1;locus_tag=CJ235_02510;product=GrpB family protein;protein_id=PMC20565.1;transl_table=11 PNGG01000001.1 Genbank gene 494037 494963 . + . ID=gene-CJ235_02515;Name=CJ235_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02515 PNGG01000001.1 Protein Homology CDS 494037 494963 . + 0 ID=cds-PMC20566.1;Parent=gene-CJ235_02515;Dbxref=NCBI_GP:PMC20566.1;Name=PMC20566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483921.1;locus_tag=CJ235_02515;product=UDP-N-acetylmuramate dehydrogenase;protein_id=PMC20566.1;transl_table=11 PNGG01000001.1 Genbank gene 494992 495306 . + . ID=gene-CJ235_02520;Name=CJ235_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02520 PNGG01000001.1 Protein Homology CDS 494992 495306 . + 0 ID=cds-PMC20567.1;Parent=gene-CJ235_02520;Dbxref=NCBI_GP:PMC20567.1;Name=PMC20567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508293.1;locus_tag=CJ235_02520;product=hypothetical protein;protein_id=PMC20567.1;transl_table=11 PNGG01000001.1 Genbank gene 495391 496428 . - . ID=gene-CJ235_02525;Name=CJ235_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02525 PNGG01000001.1 Protein Homology CDS 495391 496428 . - 0 ID=cds-PMC20568.1;Parent=gene-CJ235_02525;Dbxref=NCBI_GP:PMC20568.1;Name=PMC20568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471768.1;locus_tag=CJ235_02525;product=iron ABC transporter substrate-binding protein;protein_id=PMC20568.1;transl_table=11 PNGG01000001.1 Genbank gene 496526 497314 . - . ID=gene-CJ235_02530;Name=CJ235_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02530 PNGG01000001.1 Protein Homology CDS 496526 497314 . - 0 ID=cds-PMC20569.1;Parent=gene-CJ235_02530;Dbxref=NCBI_GP:PMC20569.1;Name=PMC20569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471784.1;locus_tag=CJ235_02530;product=iron ABC transporter ATP-binding protein;protein_id=PMC20569.1;transl_table=11 PNGG01000001.1 Genbank gene 497311 498270 . - . ID=gene-CJ235_02535;Name=CJ235_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02535 PNGG01000001.1 Protein Homology CDS 497311 498270 . - 0 ID=cds-PMC20570.1;Parent=gene-CJ235_02535;Dbxref=NCBI_GP:PMC20570.1;Name=PMC20570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471821.1;locus_tag=CJ235_02535;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=PMC20570.1;transl_table=11 PNGG01000001.1 Genbank gene 498260 499252 . - . ID=gene-CJ235_02540;Name=CJ235_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02540 PNGG01000001.1 Protein Homology CDS 498260 499252 . - 0 ID=cds-PMC20571.1;Parent=gene-CJ235_02540;Dbxref=NCBI_GP:PMC20571.1;Name=PMC20571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459740.1;locus_tag=CJ235_02540;product=iron ABC transporter permease;protein_id=PMC20571.1;transl_table=11 PNGG01000001.1 Genbank gene 499553 500527 . - . ID=gene-CJ235_02545;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CJ235_02545 PNGG01000001.1 Protein Homology CDS 499553 500527 . - 0 ID=cds-PMC20572.1;Parent=gene-CJ235_02545;Dbxref=NCBI_GP:PMC20572.1;Name=PMC20572.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471780.1;locus_tag=CJ235_02545;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=PMC20572.1;transl_table=11 PNGG01000001.1 Genbank gene 500687 502792 . - . ID=gene-CJ235_02550;Name=CJ235_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02550 PNGG01000001.1 Protein Homology CDS 500687 502792 . - 0 ID=cds-PMC20573.1;Parent=gene-CJ235_02550;Dbxref=NCBI_GP:PMC20573.1;Name=PMC20573.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764068.1;locus_tag=CJ235_02550;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=PMC20573.1;transl_table=11 PNGG01000001.1 Genbank gene 502755 503153 . - . ID=gene-CJ235_02555;Name=CJ235_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02555 PNGG01000001.1 Protein Homology CDS 502755 503153 . - 0 ID=cds-PMC20574.1;Parent=gene-CJ235_02555;Dbxref=NCBI_GP:PMC20574.1;Name=PMC20574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CJ235_02555;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=PMC20574.1;transl_table=11 PNGG01000001.1 Genbank gene 503852 504727 . + . ID=gene-CJ235_02560;Name=CJ235_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02560 PNGG01000001.1 Protein Homology CDS 503852 504727 . + 0 ID=cds-PMC20575.1;Parent=gene-CJ235_02560;Dbxref=NCBI_GP:PMC20575.1;Name=PMC20575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471773.1;locus_tag=CJ235_02560;product=EamA family transporter RarD;protein_id=PMC20575.1;transl_table=11 PNGG01000001.1 Genbank gene 504740 505240 . + . ID=gene-CJ235_02565;Name=CJ235_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02565 PNGG01000001.1 Protein Homology CDS 504740 505240 . + 0 ID=cds-PMC20576.1;Parent=gene-CJ235_02565;Dbxref=NCBI_GP:PMC20576.1;Name=PMC20576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CJ235_02565;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=PMC20576.1;transl_table=11 PNGG01000001.1 Genbank gene 505485 506999 . + . ID=gene-CJ235_02570;Name=CJ235_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02570 PNGG01000001.1 Protein Homology CDS 505485 506999 . + 0 ID=cds-PMC20577.1;Parent=gene-CJ235_02570;Dbxref=NCBI_GP:PMC20577.1;Name=PMC20577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303650.1;locus_tag=CJ235_02570;product=peptide MFS transporter;protein_id=PMC20577.1;transl_table=11 PNGG01000001.1 Genbank gene 507349 508857 . + . ID=gene-CJ235_02575;Name=CJ235_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02575 PNGG01000001.1 Protein Homology CDS 507349 508857 . + 0 ID=cds-PMC20578.1;Parent=gene-CJ235_02575;Dbxref=NCBI_GP:PMC20578.1;Name=PMC20578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471819.1;locus_tag=CJ235_02575;product=peptide MFS transporter;protein_id=PMC20578.1;transl_table=11 PNGG01000001.1 Genbank gene 509035 509949 . + . ID=gene-CJ235_02580;Name=CJ235_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02580 PNGG01000001.1 Protein Homology CDS 509035 509949 . + 0 ID=cds-PMC20579.1;Parent=gene-CJ235_02580;Dbxref=NCBI_GP:PMC20579.1;Name=PMC20579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471806.1;locus_tag=CJ235_02580;product=lipid kinase;protein_id=PMC20579.1;transl_table=11 PNGG01000001.1 Genbank gene 510060 510590 . - . ID=gene-CJ235_02585;Name=CJ235_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02585 PNGG01000001.1 Protein Homology CDS 510060 510590 . - 0 ID=cds-PMC20580.1;Parent=gene-CJ235_02585;Dbxref=NCBI_GP:PMC20580.1;Name=PMC20580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471769.1;locus_tag=CJ235_02585;product=5'(3')-deoxyribonucleotidase;protein_id=PMC20580.1;transl_table=11 PNGG01000001.1 Genbank gene 511011 512072 . - . ID=gene-CJ235_02590;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CJ235_02590 PNGG01000001.1 Protein Homology CDS 511011 512072 . - 0 ID=cds-PMC20581.1;Parent=gene-CJ235_02590;Dbxref=NCBI_GP:PMC20581.1;Name=PMC20581.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471774.1;locus_tag=CJ235_02590;product=histidinol-phosphate transaminase;protein_id=PMC20581.1;transl_table=11 PNGG01000001.1 Genbank gene 512270 513784 . - . ID=gene-CJ235_02595;Name=CJ235_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02595 PNGG01000001.1 Protein Homology CDS 512270 513784 . - 0 ID=cds-PMC20582.1;Parent=gene-CJ235_02595;Dbxref=NCBI_GP:PMC20582.1;Name=PMC20582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433273.1;locus_tag=CJ235_02595;product=proline/glycine betaine ABC transporter permease ProW;protein_id=PMC20582.1;transl_table=11 PNGG01000001.1 Genbank gene 513781 514752 . - . ID=gene-CJ235_02600;Name=CJ235_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02600 PNGG01000001.1 Protein Homology CDS 513781 514752 . - 0 ID=cds-PMC20583.1;Parent=gene-CJ235_02600;Dbxref=NCBI_GP:PMC20583.1;Name=PMC20583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471816.1;locus_tag=CJ235_02600;product=ABC transporter ATP-binding protein;protein_id=PMC20583.1;transl_table=11 PNGG01000001.1 Genbank gene 515084 516871 . - . ID=gene-CJ235_02605;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CJ235_02605 PNGG01000001.1 Protein Homology CDS 515084 516871 . - 0 ID=cds-PMC20584.1;Parent=gene-CJ235_02605;Dbxref=NCBI_GP:PMC20584.1;Name=PMC20584.1;gbkey=CDS;gene=recQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494713.1;locus_tag=CJ235_02605;product=DNA helicase RecQ;protein_id=PMC20584.1;transl_table=11 PNGG01000001.1 Genbank gene 516886 518784 . - . ID=gene-CJ235_02610;Name=CJ235_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02610 PNGG01000001.1 Protein Homology CDS 516886 518784 . - 0 ID=cds-PMC20585.1;Parent=gene-CJ235_02610;Dbxref=NCBI_GP:PMC20585.1;Name=PMC20585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471807.1;locus_tag=CJ235_02610;product=ABC transporter ATP-binding protein;protein_id=PMC20585.1;transl_table=11 PNGG01000001.1 Genbank gene 519011 519547 . + . ID=gene-CJ235_02615;Name=CJ235_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02615 PNGG01000001.1 GeneMarkS+ CDS 519011 519547 . + 0 ID=cds-PMC20586.1;Parent=gene-CJ235_02615;Dbxref=NCBI_GP:PMC20586.1;Name=PMC20586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02615;product=hypothetical protein;protein_id=PMC20586.1;transl_table=11 PNGG01000001.1 Genbank gene 520064 521812 . - . ID=gene-CJ235_02620;Name=CJ235_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02620 PNGG01000001.1 Protein Homology CDS 520064 521812 . - 0 ID=cds-PMC20587.1;Parent=gene-CJ235_02620;Dbxref=NCBI_GP:PMC20587.1;Name=PMC20587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471789.1;locus_tag=CJ235_02620;product=ABC transporter ATP-binding protein;protein_id=PMC20587.1;transl_table=11 PNGG01000001.1 Genbank gene 521840 523594 . - . ID=gene-CJ235_02625;Name=CJ235_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02625 PNGG01000001.1 Protein Homology CDS 521840 523594 . - 0 ID=cds-PMC20588.1;Parent=gene-CJ235_02625;Dbxref=NCBI_GP:PMC20588.1;Name=PMC20588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471825.1;locus_tag=CJ235_02625;product=ABC transporter ATP-binding protein;protein_id=PMC20588.1;transl_table=11 PNGG01000001.1 Genbank gene 523865 525808 . - . ID=gene-CJ235_02630;Name=CJ235_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02630 PNGG01000001.1 Protein Homology CDS 523865 525808 . - 0 ID=cds-PMC20589.1;Parent=gene-CJ235_02630;Dbxref=NCBI_GP:PMC20589.1;Name=PMC20589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764049.1;locus_tag=CJ235_02630;product=glycerol phosphate lipoteichoic acid synthase;protein_id=PMC20589.1;transl_table=11 PNGG01000001.1 Genbank gene 526437 527441 . - . ID=gene-CJ235_02635;Name=CJ235_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02635 PNGG01000001.1 Protein Homology CDS 526437 527441 . - 0 ID=cds-PMC20590.1;Parent=gene-CJ235_02635;Dbxref=NCBI_GP:PMC20590.1;Name=PMC20590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499286.1;locus_tag=CJ235_02635;product=allophanate hydrolase;protein_id=PMC20590.1;transl_table=11 PNGG01000001.1 Genbank gene 527429 528136 . - . ID=gene-CJ235_02640;Name=CJ235_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02640 PNGG01000001.1 Protein Homology CDS 527429 528136 . - 0 ID=cds-PMC20591.1;Parent=gene-CJ235_02640;Dbxref=NCBI_GP:PMC20591.1;Name=PMC20591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483946.1;locus_tag=CJ235_02640;product=allophanate hydrolase;protein_id=PMC20591.1;transl_table=11 PNGG01000001.1 Genbank gene 528159 528365 . - . ID=gene-CJ235_02645;Name=CJ235_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02645 PNGG01000001.1 GeneMarkS+ CDS 528159 528365 . - 0 ID=cds-PMC20592.1;Parent=gene-CJ235_02645;Dbxref=NCBI_GP:PMC20592.1;Name=PMC20592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02645;product=hypothetical protein;protein_id=PMC20592.1;transl_table=11 PNGG01000001.1 Genbank gene 528493 529101 . - . ID=gene-CJ235_02650;Name=CJ235_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02650 PNGG01000001.1 Protein Homology CDS 528493 529101 . - 0 ID=cds-PMC20593.1;Parent=gene-CJ235_02650;Dbxref=NCBI_GP:PMC20593.1;Name=PMC20593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471781.1;locus_tag=CJ235_02650;product=aminodeoxychorismate lyase;protein_id=PMC20593.1;transl_table=11 PNGG01000001.1 Genbank gene 529101 530243 . - . ID=gene-CJ235_02655;Name=CJ235_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02655 PNGG01000001.1 Protein Homology CDS 529101 530243 . - 0 ID=cds-PMC20594.1;Parent=gene-CJ235_02655;Dbxref=NCBI_GP:PMC20594.1;Name=PMC20594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449090.1;locus_tag=CJ235_02655;product=aminodeoxychorismate synthase component I;protein_id=PMC20594.1;transl_table=11 PNGG01000001.1 Genbank gene 530227 530814 . - . ID=gene-CJ235_02660;Name=CJ235_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02660 PNGG01000001.1 Protein Homology CDS 530227 530814 . - 0 ID=cds-PMC20595.1;Parent=gene-CJ235_02660;Dbxref=NCBI_GP:PMC20595.1;Name=PMC20595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471805.1;locus_tag=CJ235_02660;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=PMC20595.1;transl_table=11 PNGG01000001.1 Genbank gene 531087 531758 . + . ID=gene-CJ235_02665;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CJ235_02665 PNGG01000001.1 Protein Homology CDS 531087 531758 . + 0 ID=cds-PMC20812.1;Parent=gene-CJ235_02665;Dbxref=NCBI_GP:PMC20812.1;Name=PMC20812.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764042.1;locus_tag=CJ235_02665;product=7-cyano-7-deazaguanine synthase QueC;protein_id=PMC20812.1;transl_table=11 PNGG01000001.1 Genbank gene 531760 532185 . + . ID=gene-CJ235_02670;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CJ235_02670 PNGG01000001.1 Protein Homology CDS 531760 532185 . + 0 ID=cds-PMC20596.1;Parent=gene-CJ235_02670;Dbxref=NCBI_GP:PMC20596.1;Name=PMC20596.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383122.1;locus_tag=CJ235_02670;product=6-carboxytetrahydropterin synthase;protein_id=PMC20596.1;transl_table=11 PNGG01000001.1 Genbank gene 532178 532894 . + . ID=gene-CJ235_02675;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CJ235_02675 PNGG01000001.1 Protein Homology CDS 532178 532894 . + 0 ID=cds-PMC20597.1;Parent=gene-CJ235_02675;Dbxref=NCBI_GP:PMC20597.1;Name=PMC20597.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=CJ235_02675;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=PMC20597.1;transl_table=11 PNGG01000001.1 Genbank gene 533168 533764 . + . ID=gene-CJ235_02680;Name=CJ235_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02680 PNGG01000001.1 Protein Homology CDS 533168 533764 . + 0 ID=cds-PMC20598.1;Parent=gene-CJ235_02680;Dbxref=NCBI_GP:PMC20598.1;Name=PMC20598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471814.1;locus_tag=CJ235_02680;product=hypothetical protein;protein_id=PMC20598.1;transl_table=11 PNGG01000001.1 Genbank gene 533822 534076 . + . ID=gene-CJ235_02685;Name=CJ235_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02685 PNGG01000001.1 Protein Homology CDS 533822 534076 . + 0 ID=cds-PMC20599.1;Parent=gene-CJ235_02685;Dbxref=NCBI_GP:PMC20599.1;Name=PMC20599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424461.1;locus_tag=CJ235_02685;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=PMC20599.1;transl_table=11 PNGG01000001.1 Genbank gene 534275 535321 . - . ID=gene-CJ235_02690;Name=CJ235_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02690 PNGG01000001.1 Protein Homology CDS 534275 535321 . - 0 ID=cds-PMC20600.1;Parent=gene-CJ235_02690;Dbxref=NCBI_GP:PMC20600.1;Name=PMC20600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471803.1;locus_tag=CJ235_02690;product=glycosyltransferase;protein_id=PMC20600.1;transl_table=11 PNGG01000001.1 Genbank gene 535636 536475 . - . ID=gene-CJ235_02695;Name=CJ235_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02695 PNGG01000001.1 Protein Homology CDS 535636 536475 . - 0 ID=cds-PMC20601.1;Parent=gene-CJ235_02695;Dbxref=NCBI_GP:PMC20601.1;Name=PMC20601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276452.1;locus_tag=CJ235_02695;product=aldo/keto reductase;protein_id=PMC20601.1;transl_table=11 PNGG01000001.1 Genbank gene 536924 538270 . - . ID=gene-CJ235_02700;Name=CJ235_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02700 PNGG01000001.1 Protein Homology CDS 536924 538270 . - 0 ID=cds-PMC20602.1;Parent=gene-CJ235_02700;Dbxref=NCBI_GP:PMC20602.1;Name=PMC20602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455640.1;locus_tag=CJ235_02700;product=HlyC/CorC family transporter;protein_id=PMC20602.1;transl_table=11 PNGG01000001.1 Genbank gene 538481 539635 . - . ID=gene-CJ235_02705;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CJ235_02705 PNGG01000001.1 Protein Homology CDS 538481 539635 . - 0 ID=cds-PMC20603.1;Parent=gene-CJ235_02705;Dbxref=NCBI_GP:PMC20603.1;Name=PMC20603.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175591.1;locus_tag=CJ235_02705;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=PMC20603.1;transl_table=11 PNGG01000001.1 Genbank gene 539834 541780 . - . ID=gene-CJ235_02710;Name=CJ235_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02710 PNGG01000001.1 Protein Homology CDS 539834 541780 . - 0 ID=cds-PMC20604.1;Parent=gene-CJ235_02710;Dbxref=NCBI_GP:PMC20604.1;Name=PMC20604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764027.1;locus_tag=CJ235_02710;product=PTS fructose transporter subunit IIC;protein_id=PMC20604.1;transl_table=11 PNGG01000001.1 Genbank gene 541872 542789 . - . ID=gene-CJ235_02715;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CJ235_02715 PNGG01000001.1 Protein Homology CDS 541872 542789 . - 0 ID=cds-PMC20605.1;Parent=gene-CJ235_02715;Dbxref=NCBI_GP:PMC20605.1;Name=PMC20605.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471796.1;locus_tag=CJ235_02715;product=1-phosphofructokinase;protein_id=PMC20605.1;transl_table=11 PNGG01000001.1 Genbank gene 542786 543544 . - . ID=gene-CJ235_02720;Name=CJ235_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02720 PNGG01000001.1 Protein Homology CDS 542786 543544 . - 0 ID=cds-PMC20606.1;Parent=gene-CJ235_02720;Dbxref=NCBI_GP:PMC20606.1;Name=PMC20606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471794.1;locus_tag=CJ235_02720;product=DeoR/GlpR transcriptional regulator;protein_id=PMC20606.1;transl_table=11 PNGG01000001.1 Genbank gene 544043 544528 . - . ID=gene-CJ235_02725;Name=CJ235_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02725 PNGG01000001.1 Protein Homology CDS 544043 544528 . - 0 ID=cds-PMC20607.1;Parent=gene-CJ235_02725;Dbxref=NCBI_GP:PMC20607.1;Name=PMC20607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471778.1;locus_tag=CJ235_02725;product=Cys-tRNA(Pro) deacylase;protein_id=PMC20607.1;transl_table=11 PNGG01000001.1 Genbank gene 544591 545286 . - . ID=gene-CJ235_02730;Name=CJ235_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02730 PNGG01000001.1 GeneMarkS+ CDS 544591 545286 . - 0 ID=cds-PMC20608.1;Parent=gene-CJ235_02730;Dbxref=NCBI_GP:PMC20608.1;Name=PMC20608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02730;product=hypothetical protein;protein_id=PMC20608.1;transl_table=11 PNGG01000001.1 Genbank gene 545452 546606 . - . ID=gene-CJ235_02735;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CJ235_02735 PNGG01000001.1 Protein Homology CDS 545452 546606 . - 0 ID=cds-PMC20609.1;Parent=gene-CJ235_02735;Dbxref=NCBI_GP:PMC20609.1;Name=PMC20609.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764021.1;locus_tag=CJ235_02735;product=multidrug efflux MFS transporter NorA;protein_id=PMC20609.1;transl_table=11 PNGG01000001.1 Genbank gene 546928 547560 . + . ID=gene-CJ235_02740;Name=CJ235_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02740 PNGG01000001.1 Protein Homology CDS 546928 547560 . + 0 ID=cds-PMC20610.1;Parent=gene-CJ235_02740;Dbxref=NCBI_GP:PMC20610.1;Name=PMC20610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471818.1;locus_tag=CJ235_02740;product=DUF1361 domain-containing protein;protein_id=PMC20610.1;transl_table=11 PNGG01000001.1 Genbank gene 547556 547831 . + . ID=gene-CJ235_02745;Name=CJ235_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02745 PNGG01000001.1 Protein Homology CDS 547556 547831 . + 0 ID=cds-PMC20611.1;Parent=gene-CJ235_02745;Dbxref=NCBI_GP:PMC20611.1;Name=PMC20611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276462.1;locus_tag=CJ235_02745;product=hypothetical protein;protein_id=PMC20611.1;transl_table=11 PNGG01000001.1 Genbank gene 547898 548215 . - . ID=gene-CJ235_02750;Name=CJ235_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02750 PNGG01000001.1 Protein Homology CDS 547898 548215 . - 0 ID=cds-PMC20612.1;Parent=gene-CJ235_02750;Dbxref=NCBI_GP:PMC20612.1;Name=PMC20612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508341.1;locus_tag=CJ235_02750;product=hypothetical protein;protein_id=PMC20612.1;transl_table=11 PNGG01000001.1 Genbank gene 548289 549221 . - . ID=gene-CJ235_02755;Name=CJ235_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02755 PNGG01000001.1 Protein Homology CDS 548289 549221 . - 0 ID=cds-PMC20613.1;Parent=gene-CJ235_02755;Dbxref=NCBI_GP:PMC20613.1;Name=PMC20613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512084.1;locus_tag=CJ235_02755;product=GTP-binding protein;protein_id=PMC20613.1;transl_table=11 PNGG01000001.1 Genbank gene 549475 549915 . + . ID=gene-CJ235_02760;Name=CJ235_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02760 PNGG01000001.1 Protein Homology CDS 549475 549915 . + 0 ID=cds-PMC20614.1;Parent=gene-CJ235_02760;Dbxref=NCBI_GP:PMC20614.1;Name=PMC20614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499253.1;locus_tag=CJ235_02760;product=MarR family transcriptional regulator;protein_id=PMC20614.1;transl_table=11 PNGG01000001.1 Genbank gene 550051 551721 . - . ID=gene-CJ235_02765;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CJ235_02765 PNGG01000001.1 Protein Homology CDS 550051 551721 . - 0 ID=cds-PMC20615.1;Parent=gene-CJ235_02765;Dbxref=NCBI_GP:PMC20615.1;Name=PMC20615.1;gbkey=CDS;gene=cydC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512083.1;locus_tag=CJ235_02765;product=thiol reductant ABC exporter subunit CydC;protein_id=PMC20615.1;transl_table=11 PNGG01000001.1 Genbank gene 551699 553351 . - . ID=gene-CJ235_02770;Name=CJ235_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02770 PNGG01000001.1 Protein Homology CDS 551699 553351 . - 0 ID=cds-PMC20616.1;Parent=gene-CJ235_02770;Dbxref=NCBI_GP:PMC20616.1;Name=PMC20616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472615.1;locus_tag=CJ235_02770;product=cysteine ABC transporter ATP-binding protein;protein_id=PMC20616.1;transl_table=11 PNGG01000001.1 Genbank gene 553513 554388 . + . ID=gene-CJ235_02775;Name=CJ235_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02775 PNGG01000001.1 Protein Homology CDS 553513 554388 . + 0 ID=cds-PMC20617.1;Parent=gene-CJ235_02775;Dbxref=NCBI_GP:PMC20617.1;Name=PMC20617.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483975.1;locus_tag=CJ235_02775;product=undecaprenyl-diphosphate phosphatase;protein_id=PMC20617.1;transl_table=11 PNGG01000001.1 Genbank gene 554594 555193 . + . ID=gene-CJ235_02780;Name=CJ235_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02780 PNGG01000001.1 GeneMarkS+ CDS 554594 555193 . + 0 ID=cds-PMC20618.1;Parent=gene-CJ235_02780;Dbxref=NCBI_GP:PMC20618.1;Name=PMC20618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02780;product=hypothetical protein;protein_id=PMC20618.1;transl_table=11 PNGG01000001.1 Genbank gene 555195 555650 . + . ID=gene-CJ235_02785;Name=CJ235_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02785 PNGG01000001.1 Protein Homology CDS 555195 555650 . + 0 ID=cds-PMC20619.1;Parent=gene-CJ235_02785;Dbxref=NCBI_GP:PMC20619.1;Name=PMC20619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472554.1;locus_tag=CJ235_02785;product=YaiI/YqxD family protein;protein_id=PMC20619.1;transl_table=11 PNGG01000001.1 Genbank gene 555663 556229 . + . ID=gene-CJ235_02790;Name=CJ235_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02790 PNGG01000001.1 Protein Homology CDS 555663 556229 . + 0 ID=cds-PMC20620.1;Parent=gene-CJ235_02790;Dbxref=NCBI_GP:PMC20620.1;Name=PMC20620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764005.1;locus_tag=CJ235_02790;product=TIGR00730 family Rossman fold protein;protein_id=PMC20620.1;transl_table=11 PNGG01000001.1 Genbank gene 556439 556837 . - . ID=gene-CJ235_02795;Name=CJ235_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02795 PNGG01000001.1 GeneMarkS+ CDS 556439 556837 . - 0 ID=cds-PMC20621.1;Parent=gene-CJ235_02795;Dbxref=NCBI_GP:PMC20621.1;Name=PMC20621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02795;product=hypothetical protein;protein_id=PMC20621.1;transl_table=11 PNGG01000001.1 Genbank gene 556998 557513 . + . ID=gene-CJ235_02800;Name=CJ235_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02800 PNGG01000001.1 Protein Homology CDS 556998 557513 . + 0 ID=cds-PMC20622.1;Parent=gene-CJ235_02800;Dbxref=NCBI_GP:PMC20622.1;Name=PMC20622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015010630.1;locus_tag=CJ235_02800;product=hypothetical protein;protein_id=PMC20622.1;transl_table=11 PNGG01000001.1 Genbank gene 557708 558145 . - . ID=gene-CJ235_02805;Name=CJ235_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02805 PNGG01000001.1 Protein Homology CDS 557708 558145 . - 0 ID=cds-PMC20623.1;Parent=gene-CJ235_02805;Dbxref=NCBI_GP:PMC20623.1;Name=PMC20623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13673.5;locus_tag=CJ235_02805;product=N-acetyltransferase;protein_id=PMC20623.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 558276 558907 . - . ID=gene-CJ235_02810;Name=CJ235_02810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_02810;pseudo=true PNGG01000001.1 Protein Homology CDS 558276 558907 . - 0 ID=cds-CJ235_02810;Parent=gene-CJ235_02810;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094966.1;locus_tag=CJ235_02810;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 559142 560392 . - . ID=gene-CJ235_02815;Name=CJ235_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02815 PNGG01000001.1 Protein Homology CDS 559142 560392 . - 0 ID=cds-PMC20624.1;Parent=gene-CJ235_02815;Dbxref=NCBI_GP:PMC20624.1;Name=PMC20624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472566.1;locus_tag=CJ235_02815;product=aminoacyltransferase;protein_id=PMC20624.1;transl_table=11 PNGG01000001.1 Genbank gene 560549 561097 . - . ID=gene-CJ235_02820;Name=CJ235_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02820 PNGG01000001.1 Protein Homology CDS 560549 561097 . - 0 ID=cds-PMC20625.1;Parent=gene-CJ235_02820;Dbxref=NCBI_GP:PMC20625.1;Name=PMC20625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361067.1;locus_tag=CJ235_02820;product=N-acetyltransferase;protein_id=PMC20625.1;transl_table=11 PNGG01000001.1 Genbank gene 561299 561595 . - . ID=gene-CJ235_02825;Name=CJ235_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02825 PNGG01000001.1 Protein Homology CDS 561299 561595 . - 0 ID=cds-PMC20626.1;Parent=gene-CJ235_02825;Dbxref=NCBI_GP:PMC20626.1;Name=PMC20626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499245.1;locus_tag=CJ235_02825;product=hypothetical protein;protein_id=PMC20626.1;transl_table=11 PNGG01000001.1 Genbank gene 561903 562235 . - . ID=gene-CJ235_02830;Name=CJ235_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02830 PNGG01000001.1 Protein Homology CDS 561903 562235 . - 0 ID=cds-PMC20627.1;Parent=gene-CJ235_02830;Dbxref=NCBI_GP:PMC20627.1;Name=PMC20627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472605.1;locus_tag=CJ235_02830;product=hypothetical protein;protein_id=PMC20627.1;transl_table=11 PNGG01000001.1 Genbank gene 562461 563144 . + . ID=gene-CJ235_02835;Name=CJ235_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02835 PNGG01000001.1 Protein Homology CDS 562461 563144 . + 0 ID=cds-PMC20628.1;Parent=gene-CJ235_02835;Dbxref=NCBI_GP:PMC20628.1;Name=PMC20628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472581.1;locus_tag=CJ235_02835;product=DUF1129 domain-containing protein;protein_id=PMC20628.1;transl_table=11 PNGG01000001.1 Genbank gene 563216 564373 . - . ID=gene-CJ235_02840;Name=CJ235_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02840 PNGG01000001.1 Protein Homology CDS 563216 564373 . - 0 ID=cds-PMC20629.1;Parent=gene-CJ235_02840;Dbxref=NCBI_GP:PMC20629.1;Name=PMC20629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512079.1;locus_tag=CJ235_02840;product=MFS transporter AraJ;protein_id=PMC20629.1;transl_table=11 PNGG01000001.1 Genbank gene 564661 565146 . - . ID=gene-CJ235_02845;Name=CJ235_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02845 PNGG01000001.1 Protein Homology CDS 564661 565146 . - 0 ID=cds-PMC20630.1;Parent=gene-CJ235_02845;Dbxref=NCBI_GP:PMC20630.1;Name=PMC20630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472534.1;locus_tag=CJ235_02845;product=DUF456 domain-containing protein;protein_id=PMC20630.1;transl_table=11 PNGG01000001.1 Genbank gene 565143 566363 . - . ID=gene-CJ235_02850;Name=CJ235_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02850 PNGG01000001.1 Protein Homology CDS 565143 566363 . - 0 ID=cds-PMC20631.1;Parent=gene-CJ235_02850;Dbxref=NCBI_GP:PMC20631.1;Name=PMC20631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472528.1;locus_tag=CJ235_02850;product=MFS transporter;protein_id=PMC20631.1;transl_table=11 PNGG01000001.1 Genbank gene 566399 567259 . - . ID=gene-CJ235_02855;Name=CJ235_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02855 PNGG01000001.1 Protein Homology CDS 566399 567259 . - 0 ID=cds-PMC20632.1;Parent=gene-CJ235_02855;Dbxref=NCBI_GP:PMC20632.1;Name=PMC20632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472595.1;locus_tag=CJ235_02855;product=LysR family transcriptional regulator;protein_id=PMC20632.1;transl_table=11 PNGG01000001.1 Genbank gene 567440 568231 . - . ID=gene-CJ235_02860;Name=CJ235_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02860 PNGG01000001.1 Protein Homology CDS 567440 568231 . - 0 ID=cds-PMC20633.1;Parent=gene-CJ235_02860;Dbxref=NCBI_GP:PMC20633.1;Name=PMC20633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472561.1;locus_tag=CJ235_02860;product=DUF402 domain-containing protein;protein_id=PMC20633.1;transl_table=11 PNGG01000001.1 Genbank gene 568306 568518 . - . ID=gene-CJ235_02865;Name=CJ235_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02865 PNGG01000001.1 GeneMarkS+ CDS 568306 568518 . - 0 ID=cds-PMC20634.1;Parent=gene-CJ235_02865;Dbxref=NCBI_GP:PMC20634.1;Name=PMC20634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02865;product=CopG family transcriptional regulator;protein_id=PMC20634.1;transl_table=11 PNGG01000001.1 Genbank gene 568942 569430 . - . ID=gene-CJ235_02870;Name=CJ235_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02870 PNGG01000001.1 Protein Homology CDS 568942 569430 . - 0 ID=cds-PMC20635.1;Parent=gene-CJ235_02870;Dbxref=NCBI_GP:PMC20635.1;Name=PMC20635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472572.1;locus_tag=CJ235_02870;product=cupin;protein_id=PMC20635.1;transl_table=11 PNGG01000001.1 Genbank gene 569430 570149 . - . ID=gene-CJ235_02875;Name=CJ235_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02875 PNGG01000001.1 Protein Homology CDS 569430 570149 . - 0 ID=cds-PMC20636.1;Parent=gene-CJ235_02875;Dbxref=NCBI_GP:PMC20636.1;Name=PMC20636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472555.1;locus_tag=CJ235_02875;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=PMC20636.1;transl_table=11 PNGG01000001.1 Genbank gene 570693 570890 . - . ID=gene-CJ235_02880;Name=CJ235_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02880 PNGG01000001.1 GeneMarkS+ CDS 570693 570890 . - 0 ID=cds-PMC20637.1;Parent=gene-CJ235_02880;Dbxref=NCBI_GP:PMC20637.1;Name=PMC20637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_02880;product=hypothetical protein;protein_id=PMC20637.1;transl_table=11 PNGG01000001.1 Genbank gene 571087 571446 . - . ID=gene-CJ235_02885;Name=CJ235_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02885 PNGG01000001.1 Protein Homology CDS 571087 571446 . - 0 ID=cds-PMC20638.1;Parent=gene-CJ235_02885;Dbxref=NCBI_GP:PMC20638.1;Name=PMC20638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508366.1;locus_tag=CJ235_02885;product=MarR family transcriptional regulator;protein_id=PMC20638.1;transl_table=11 PNGG01000001.1 Genbank gene 571601 573769 . - . ID=gene-CJ235_02890;Name=CJ235_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02890 PNGG01000001.1 Protein Homology CDS 571601 573769 . - 0 ID=cds-PMC20639.1;Parent=gene-CJ235_02890;Dbxref=NCBI_GP:PMC20639.1;Name=PMC20639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CJ235_02890;product=AraC family transcriptional regulator;protein_id=PMC20639.1;transl_table=11 PNGG01000001.1 Genbank gene 574108 574776 . - . ID=gene-CJ235_02895;Name=CJ235_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02895 PNGG01000001.1 Protein Homology CDS 574108 574776 . - 0 ID=cds-PMC20640.1;Parent=gene-CJ235_02895;Dbxref=NCBI_GP:PMC20640.1;Name=PMC20640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472547.1;locus_tag=CJ235_02895;product=hypothetical protein;protein_id=PMC20640.1;transl_table=11 PNGG01000001.1 Genbank gene 575106 575942 . + . ID=gene-CJ235_02900;Name=CJ235_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02900 PNGG01000001.1 Protein Homology CDS 575106 575942 . + 0 ID=cds-PMC20641.1;Parent=gene-CJ235_02900;Dbxref=NCBI_GP:PMC20641.1;Name=PMC20641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508368.1;locus_tag=CJ235_02900;product=LysM peptidoglycan-binding domain-containing protein;protein_id=PMC20641.1;transl_table=11 PNGG01000001.1 Genbank gene 576381 577397 . - . ID=gene-CJ235_02905;Name=CJ235_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02905 PNGG01000001.1 Protein Homology CDS 576381 577397 . - 0 ID=cds-PMC20642.1;Parent=gene-CJ235_02905;Dbxref=NCBI_GP:PMC20642.1;Name=PMC20642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472514.1;locus_tag=CJ235_02905;product=anion permease;protein_id=PMC20642.1;transl_table=11 PNGG01000001.1 Genbank gene 577411 578028 . - . ID=gene-CJ235_02910;Name=CJ235_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02910 PNGG01000001.1 Protein Homology CDS 577411 578028 . - 0 ID=cds-PMC20643.1;Parent=gene-CJ235_02910;Dbxref=NCBI_GP:PMC20643.1;Name=PMC20643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722596.1;locus_tag=CJ235_02910;product=DUF47 domain-containing protein;protein_id=PMC20643.1;transl_table=11 PNGG01000001.1 Genbank gene 578737 579243 . + . ID=gene-CJ235_02915;Name=CJ235_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02915 PNGG01000001.1 Protein Homology CDS 578737 579243 . + 0 ID=cds-PMC20644.1;Parent=gene-CJ235_02915;Dbxref=NCBI_GP:PMC20644.1;Name=PMC20644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508374.1;locus_tag=CJ235_02915;product=N-acetyltransferase;protein_id=PMC20644.1;transl_table=11 PNGG01000001.1 Genbank gene 579332 580363 . - . ID=gene-CJ235_02920;Name=CJ235_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02920 PNGG01000001.1 Protein Homology CDS 579332 580363 . - 0 ID=cds-PMC20645.1;Parent=gene-CJ235_02920;Dbxref=NCBI_GP:PMC20645.1;Name=PMC20645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472565.1;locus_tag=CJ235_02920;product=alpha/beta hydrolase;protein_id=PMC20645.1;transl_table=11 PNGG01000001.1 Genbank gene 580602 581669 . - . ID=gene-CJ235_02925;Name=CJ235_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02925 PNGG01000001.1 Protein Homology CDS 580602 581669 . - 0 ID=cds-PMC20646.1;Parent=gene-CJ235_02925;Dbxref=NCBI_GP:PMC20646.1;Name=PMC20646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472541.1;locus_tag=CJ235_02925;product=hypothetical protein;protein_id=PMC20646.1;transl_table=11 PNGG01000001.1 Genbank gene 582003 582503 . - . ID=gene-CJ235_02930;Name=CJ235_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02930 PNGG01000001.1 Protein Homology CDS 582003 582503 . - 0 ID=cds-PMC20647.1;Parent=gene-CJ235_02930;Dbxref=NCBI_GP:PMC20647.1;Name=PMC20647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763977.1;locus_tag=CJ235_02930;product=hypothetical protein;protein_id=PMC20647.1;transl_table=11 PNGG01000001.1 Genbank gene 582621 582995 . - . ID=gene-CJ235_02935;Name=CJ235_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02935 PNGG01000001.1 Protein Homology CDS 582621 582995 . - 0 ID=cds-PMC20648.1;Parent=gene-CJ235_02935;Dbxref=NCBI_GP:PMC20648.1;Name=PMC20648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472521.1;locus_tag=CJ235_02935;product=PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM;protein_id=PMC20648.1;transl_table=11 PNGG01000001.1 Genbank gene 582997 583572 . - . ID=gene-CJ235_02940;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CJ235_02940 PNGG01000001.1 Protein Homology CDS 582997 583572 . - 0 ID=cds-PMC20649.1;Parent=gene-CJ235_02940;Dbxref=NCBI_GP:PMC20649.1;Name=PMC20649.1;gbkey=CDS;gene=dhaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472584.1;locus_tag=CJ235_02940;product=dihydroxyacetone kinase subunit L;protein_id=PMC20649.1;transl_table=11 PNGG01000001.1 Genbank gene 583586 584551 . - . ID=gene-CJ235_02945;Name=CJ235_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02945 PNGG01000001.1 Protein Homology CDS 583586 584551 . - 0 ID=cds-PMC20650.1;Parent=gene-CJ235_02945;Dbxref=NCBI_GP:PMC20650.1;Name=PMC20650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472588.1;locus_tag=CJ235_02945;product=dihydroxyacetone kinase subunit DhaK;protein_id=PMC20650.1;transl_table=11 PNGG01000001.1 Genbank gene 584783 585799 . - . ID=gene-CJ235_02950;Name=CJ235_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02950 PNGG01000001.1 Protein Homology CDS 584783 585799 . - 0 ID=cds-PMC20651.1;Parent=gene-CJ235_02950;Dbxref=NCBI_GP:PMC20651.1;Name=PMC20651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508381.1;locus_tag=CJ235_02950;product=iron ABC transporter permease;protein_id=PMC20651.1;transl_table=11 PNGG01000001.1 Genbank gene 585796 586791 . - . ID=gene-CJ235_02955;Name=CJ235_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02955 PNGG01000001.1 Protein Homology CDS 585796 586791 . - 0 ID=cds-PMC20652.1;Parent=gene-CJ235_02955;Dbxref=NCBI_GP:PMC20652.1;Name=PMC20652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472537.1;locus_tag=CJ235_02955;product=iron ABC transporter permease;protein_id=PMC20652.1;transl_table=11 PNGG01000001.1 Genbank gene 586804 587607 . - . ID=gene-CJ235_02960;Name=CJ235_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02960 PNGG01000001.1 Protein Homology CDS 586804 587607 . - 0 ID=cds-PMC20653.1;Parent=gene-CJ235_02960;Dbxref=NCBI_GP:PMC20653.1;Name=PMC20653.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722609.1;locus_tag=CJ235_02960;product=ABC transporter ATP-binding protein;protein_id=PMC20653.1;transl_table=11 PNGG01000001.1 Genbank gene 587903 588736 . - . ID=gene-CJ235_02965;Name=CJ235_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02965 PNGG01000001.1 Protein Homology CDS 587903 588736 . - 0 ID=cds-PMC20654.1;Parent=gene-CJ235_02965;Dbxref=NCBI_GP:PMC20654.1;Name=PMC20654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763975.1;locus_tag=CJ235_02965;product=YitT family protein;protein_id=PMC20654.1;transl_table=11 PNGG01000001.1 Genbank gene 589236 590462 . - . ID=gene-CJ235_02970;Name=CJ235_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02970 PNGG01000001.1 Protein Homology CDS 589236 590462 . - 0 ID=cds-PMC20655.1;Parent=gene-CJ235_02970;Dbxref=NCBI_GP:PMC20655.1;Name=PMC20655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441322.1;locus_tag=CJ235_02970;product=NupC/NupG family nucleoside CNT transporter;protein_id=PMC20655.1;transl_table=11 PNGG01000001.1 Genbank gene 590779 592497 . - . ID=gene-CJ235_02975;Name=CJ235_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02975 PNGG01000001.1 Protein Homology CDS 590779 592497 . - 0 ID=cds-PMC20656.1;Parent=gene-CJ235_02975;Dbxref=NCBI_GP:PMC20656.1;Name=PMC20656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499207.1;locus_tag=CJ235_02975;product=ABC transporter ATP-binding protein;protein_id=PMC20656.1;transl_table=11 PNGG01000001.1 Genbank gene 592687 593973 . + . ID=gene-CJ235_02980;Name=CJ235_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02980 PNGG01000001.1 Protein Homology CDS 592687 593973 . + 0 ID=cds-PMC20657.1;Parent=gene-CJ235_02980;Dbxref=NCBI_GP:PMC20657.1;Name=PMC20657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930899.1;locus_tag=CJ235_02980;product=DUF1958 domain-containing protein;protein_id=PMC20657.1;transl_table=11 PNGG01000001.1 Genbank gene 594168 594566 . - . ID=gene-CJ235_02985;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CJ235_02985 PNGG01000001.1 Protein Homology CDS 594168 594566 . - 0 ID=cds-PMC20658.1;Parent=gene-CJ235_02985;Dbxref=NCBI_GP:PMC20658.1;Name=PMC20658.1;gbkey=CDS;gene=tagD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CJ235_02985;product=glycerol-3-phosphate cytidylyltransferase;protein_id=PMC20658.1;transl_table=11 PNGG01000001.1 Genbank gene 594681 595739 . - . ID=gene-CJ235_02990;Name=CJ235_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02990 PNGG01000001.1 Protein Homology CDS 594681 595739 . - 0 ID=cds-PMC20659.1;Parent=gene-CJ235_02990;Dbxref=NCBI_GP:PMC20659.1;Name=PMC20659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508389.1;locus_tag=CJ235_02990;product=glycosyltransferase family 2 protein;protein_id=PMC20659.1;transl_table=11 PNGG01000001.1 Genbank gene 595736 596830 . - . ID=gene-CJ235_02995;Name=CJ235_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_02995 PNGG01000001.1 Protein Homology CDS 595736 596830 . - 0 ID=cds-PMC20660.1;Parent=gene-CJ235_02995;Dbxref=NCBI_GP:PMC20660.1;Name=PMC20660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276517.1;locus_tag=CJ235_02995;product=CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase;protein_id=PMC20660.1;transl_table=11 PNGG01000001.1 Genbank gene 597271 597528 . - . ID=gene-CJ235_03000;Name=CJ235_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03000 PNGG01000001.1 Protein Homology CDS 597271 597528 . - 0 ID=cds-PMC20661.1;Parent=gene-CJ235_03000;Dbxref=NCBI_GP:PMC20661.1;Name=PMC20661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472515.1;locus_tag=CJ235_03000;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=PMC20661.1;transl_table=11 PNGG01000001.1 Genbank gene 597633 598433 . - . ID=gene-CJ235_03005;Name=CJ235_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03005 PNGG01000001.1 Protein Homology CDS 597633 598433 . - 0 ID=cds-PMC20662.1;Parent=gene-CJ235_03005;Dbxref=NCBI_GP:PMC20662.1;Name=PMC20662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722617.1;locus_tag=CJ235_03005;product=ABC transporter permease;protein_id=PMC20662.1;transl_table=11 PNGG01000001.1 Genbank gene 598809 599603 . + . ID=gene-CJ235_03010;Name=CJ235_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03010 PNGG01000001.1 Protein Homology CDS 598809 599603 . + 0 ID=cds-PMC20663.1;Parent=gene-CJ235_03010;Dbxref=NCBI_GP:PMC20663.1;Name=PMC20663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CJ235_03010;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=PMC20663.1;transl_table=11 PNGG01000001.1 Genbank gene 600127 600477 . + . ID=gene-CJ235_03015;Name=CJ235_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03015 PNGG01000001.1 Protein Homology CDS 600127 600477 . + 0 ID=cds-PMC20664.1;Parent=gene-CJ235_03015;Dbxref=NCBI_GP:PMC20664.1;Name=PMC20664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001789847.1;locus_tag=CJ235_03015;product=DUF2294 domain-containing protein;protein_id=PMC20664.1;transl_table=11 PNGG01000001.1 Genbank gene 600746 601777 . + . ID=gene-CJ235_03020;Name=CJ235_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03020 PNGG01000001.1 Protein Homology CDS 600746 601777 . + 0 ID=cds-PMC20665.1;Parent=gene-CJ235_03020;Dbxref=NCBI_GP:PMC20665.1;Name=PMC20665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472575.1;locus_tag=CJ235_03020;product=formate dehydrogenase;protein_id=PMC20665.1;transl_table=11 PNGG01000001.1 Genbank gene 602096 602845 . - . ID=gene-CJ235_03025;Name=CJ235_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03025 PNGG01000001.1 Protein Homology CDS 602096 602845 . - 0 ID=cds-PMC20666.1;Parent=gene-CJ235_03025;Dbxref=NCBI_GP:PMC20666.1;Name=PMC20666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472603.1;locus_tag=CJ235_03025;product=glycosyltransferase;protein_id=PMC20666.1;transl_table=11 PNGG01000001.1 Genbank gene 603018 603767 . + . ID=gene-CJ235_03030;Name=CJ235_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03030 PNGG01000001.1 Protein Homology CDS 603018 603767 . + 0 ID=cds-PMC20667.1;Parent=gene-CJ235_03030;Dbxref=NCBI_GP:PMC20667.1;Name=PMC20667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512072.1;locus_tag=CJ235_03030;product=hypothetical protein;protein_id=PMC20667.1;transl_table=11 PNGG01000001.1 Genbank gene 603840 604484 . - . ID=gene-CJ235_03035;Name=CJ235_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03035 PNGG01000001.1 Protein Homology CDS 603840 604484 . - 0 ID=cds-PMC20668.1;Parent=gene-CJ235_03035;Dbxref=NCBI_GP:PMC20668.1;Name=PMC20668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722623.1;locus_tag=CJ235_03035;product=metal-dependent transcriptional regulator;protein_id=PMC20668.1;transl_table=11 PNGG01000001.1 Genbank gene 604605 605312 . + . ID=gene-CJ235_03040;Name=CJ235_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03040 PNGG01000001.1 Protein Homology CDS 604605 605312 . + 0 ID=cds-PMC20669.1;Parent=gene-CJ235_03040;Dbxref=NCBI_GP:PMC20669.1;Name=PMC20669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472617.1;locus_tag=CJ235_03040;product=metal ABC transporter ATP-binding protein;protein_id=PMC20669.1;transl_table=11 PNGG01000001.1 Genbank gene 605328 606161 . + . ID=gene-CJ235_03045;Name=CJ235_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03045 PNGG01000001.1 Protein Homology CDS 605328 606161 . + 0 ID=cds-PMC20670.1;Parent=gene-CJ235_03045;Dbxref=NCBI_GP:PMC20670.1;Name=PMC20670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303730.1;locus_tag=CJ235_03045;product=metal ABC transporter permease;protein_id=PMC20670.1;transl_table=11 PNGG01000001.1 Genbank gene 606158 607090 . + . ID=gene-CJ235_03050;Name=CJ235_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03050 PNGG01000001.1 Protein Homology CDS 606158 607090 . + 0 ID=cds-PMC20671.1;Parent=gene-CJ235_03050;Dbxref=NCBI_GP:PMC20671.1;Name=PMC20671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472607.1;locus_tag=CJ235_03050;product=metal ABC transporter substrate-binding protein;protein_id=PMC20671.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 607622 609670 . - . ID=gene-CJ235_03055;Name=CJ235_03055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_03055;pseudo=true PNGG01000001.1 Protein Homology CDS 607622 609670 . - 0 ID=cds-CJ235_03055;Parent=gene-CJ235_03055;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763959.1;locus_tag=CJ235_03055;product=sodium:proton antiporter;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 610073 610531 . - . ID=gene-CJ235_03060;Name=CJ235_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03060 PNGG01000001.1 Protein Homology CDS 610073 610531 . - 0 ID=cds-PMC20672.1;Parent=gene-CJ235_03060;Dbxref=NCBI_GP:PMC20672.1;Name=PMC20672.1;Note=subunit G of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472602.1;locus_tag=CJ235_03060;product=cation:proton antiporter;protein_id=PMC20672.1;transl_table=11 PNGG01000001.1 Genbank gene 610506 610808 . - . ID=gene-CJ235_03065;Name=CJ235_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03065 PNGG01000001.1 Protein Homology CDS 610506 610808 . - 0 ID=cds-PMC20673.1;Parent=gene-CJ235_03065;Dbxref=NCBI_GP:PMC20673.1;Name=PMC20673.1;Note=subunit F of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=CJ235_03065;product=cation:proton antiporter;protein_id=PMC20673.1;transl_table=11 PNGG01000001.1 Genbank gene 610805 611287 . - . ID=gene-CJ235_03070;Name=CJ235_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03070 PNGG01000001.1 Protein Homology CDS 610805 611287 . - 0 ID=cds-PMC20674.1;Parent=gene-CJ235_03070;Dbxref=NCBI_GP:PMC20674.1;Name=PMC20674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763956.1;locus_tag=CJ235_03070;product=Na+/H+ antiporter subunit E;protein_id=PMC20674.1;transl_table=11 PNGG01000001.1 Genbank gene 611284 612789 . - . ID=gene-CJ235_03075;Name=CJ235_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03075 PNGG01000001.1 Protein Homology CDS 611284 612789 . - 0 ID=cds-PMC20675.1;Parent=gene-CJ235_03075;Dbxref=NCBI_GP:PMC20675.1;Name=PMC20675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472517.1;locus_tag=CJ235_03075;product=Na+/H+ antiporter subunit D;protein_id=PMC20675.1;transl_table=11 PNGG01000001.1 Genbank gene 612782 613132 . - . ID=gene-CJ235_03080;Name=CJ235_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03080 PNGG01000001.1 Protein Homology CDS 612782 613132 . - 0 ID=cds-PMC20676.1;Parent=gene-CJ235_03080;Dbxref=NCBI_GP:PMC20676.1;Name=PMC20676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468411.1;locus_tag=CJ235_03080;product=antiporter;protein_id=PMC20676.1;transl_table=11 PNGG01000001.1 Genbank gene 613129 613554 . - . ID=gene-CJ235_03085;Name=CJ235_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03085 PNGG01000001.1 Protein Homology CDS 613129 613554 . - 0 ID=cds-PMC20677.1;Parent=gene-CJ235_03085;Dbxref=NCBI_GP:PMC20677.1;Name=PMC20677.1;Note=subunit B of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in the case of S. meliloti it was proved to be involved specifically with K+ transport;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763953.1;locus_tag=CJ235_03085;product=Na(+)/H(+) antiporter subunit B;protein_id=PMC20677.1;transl_table=11 PNGG01000001.1 Genbank gene 613541 615937 . - . ID=gene-CJ235_03090;Name=CJ235_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03090 PNGG01000001.1 Protein Homology CDS 613541 615937 . - 0 ID=cds-PMC20678.1;Parent=gene-CJ235_03090;Dbxref=NCBI_GP:PMC20678.1;Name=PMC20678.1;Note=subunit A of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472578.1;locus_tag=CJ235_03090;product=DUF4040 domain-containing protein;protein_id=PMC20678.1;transl_table=11 PNGG01000001.1 Genbank gene 615964 616521 . - . ID=gene-CJ235_03095;Name=CJ235_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03095 PNGG01000001.1 Protein Homology CDS 615964 616521 . - 0 ID=cds-PMC20679.1;Parent=gene-CJ235_03095;Dbxref=NCBI_GP:PMC20679.1;Name=PMC20679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484038.1;locus_tag=CJ235_03095;product=tyrosine recombinase XerS;protein_id=PMC20679.1;transl_table=11 PNGG01000001.1 Genbank gene 616672 616869 . + . ID=gene-CJ235_03100;Name=CJ235_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03100 PNGG01000001.1 Protein Homology CDS 616672 616869 . + 0 ID=cds-PMC20680.1;Parent=gene-CJ235_03100;Dbxref=NCBI_GP:PMC20680.1;Name=PMC20680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472526.1;locus_tag=CJ235_03100;product=hypothetical protein;protein_id=PMC20680.1;transl_table=11 PNGG01000001.1 Genbank gene 616859 617104 . + . ID=gene-CJ235_03105;Name=CJ235_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03105 PNGG01000001.1 Protein Homology CDS 616859 617104 . + 0 ID=cds-PMC20681.1;Parent=gene-CJ235_03105;Dbxref=NCBI_GP:PMC20681.1;Name=PMC20681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11148.6;locus_tag=CJ235_03105;product=DUF2922 domain-containing protein;protein_id=PMC20681.1;transl_table=11 PNGG01000001.1 Genbank gene 617400 617651 . - . ID=gene-CJ235_03110;Name=CJ235_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03110 PNGG01000001.1 Protein Homology CDS 617400 617651 . - 0 ID=cds-PMC20682.1;Parent=gene-CJ235_03110;Dbxref=NCBI_GP:PMC20682.1;Name=PMC20682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472598.1;locus_tag=CJ235_03110;product=hypothetical protein;protein_id=PMC20682.1;transl_table=11 PNGG01000001.1 Genbank gene 618025 618954 . + . ID=gene-CJ235_03115;Name=CJ235_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03115 PNGG01000001.1 Protein Homology CDS 618025 618954 . + 0 ID=cds-PMC20683.1;Parent=gene-CJ235_03115;Dbxref=NCBI_GP:PMC20683.1;Name=PMC20683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722640.1;locus_tag=CJ235_03115;product=hypothetical protein;protein_id=PMC20683.1;transl_table=11 PNGG01000001.1 Genbank gene 619122 620045 . + . ID=gene-CJ235_03120;Name=CJ235_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03120 PNGG01000001.1 Protein Homology CDS 619122 620045 . + 0 ID=cds-PMC20684.1;Parent=gene-CJ235_03120;Dbxref=NCBI_GP:PMC20684.1;Name=PMC20684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13437.4;locus_tag=CJ235_03120;product=efflux RND transporter periplasmic adaptor subunit;protein_id=PMC20684.1;transl_table=11 PNGG01000001.1 Genbank gene 620411 620785 . + . ID=gene-CJ235_03125;Name=CJ235_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03125 PNGG01000001.1 Protein Homology CDS 620411 620785 . + 0 ID=cds-PMC20685.1;Parent=gene-CJ235_03125;Dbxref=NCBI_GP:PMC20685.1;Name=PMC20685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763945.1;locus_tag=CJ235_03125;product=transcriptional regulator;protein_id=PMC20685.1;transl_table=11 PNGG01000001.1 Genbank gene 621031 621741 . - . ID=gene-CJ235_03130;Name=CJ235_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03130 PNGG01000001.1 Protein Homology CDS 621031 621741 . - 0 ID=cds-PMC20686.1;Parent=gene-CJ235_03130;Dbxref=NCBI_GP:PMC20686.1;Name=PMC20686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472529.1;locus_tag=CJ235_03130;product=preprotein translocase subunit SecE;protein_id=PMC20686.1;transl_table=11 PNGG01000001.1 Genbank gene 622051 622557 . - . ID=gene-CJ235_03135;Name=CJ235_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03135 PNGG01000001.1 Protein Homology CDS 622051 622557 . - 0 ID=cds-PMC20687.1;Parent=gene-CJ235_03135;Dbxref=NCBI_GP:PMC20687.1;Name=PMC20687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508416.1;locus_tag=CJ235_03135;product=hypothetical protein;protein_id=PMC20687.1;transl_table=11 PNGG01000001.1 Genbank gene 622821 623621 . - . ID=gene-CJ235_03140;Name=CJ235_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03140 PNGG01000001.1 Protein Homology CDS 622821 623621 . - 0 ID=cds-PMC20688.1;Parent=gene-CJ235_03140;Dbxref=NCBI_GP:PMC20688.1;Name=PMC20688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472523.1;locus_tag=CJ235_03140;product=alpha/beta hydrolase;protein_id=PMC20688.1;transl_table=11 PNGG01000001.1 Genbank gene 623629 624327 . - . ID=gene-CJ235_03145;Name=CJ235_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03145 PNGG01000001.1 Protein Homology CDS 623629 624327 . - 0 ID=cds-PMC20689.1;Parent=gene-CJ235_03145;Dbxref=NCBI_GP:PMC20689.1;Name=PMC20689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433179.1;locus_tag=CJ235_03145;product=HAD family hydrolase;protein_id=PMC20689.1;transl_table=11 PNGG01000001.1 Genbank gene 624484 625443 . - . ID=gene-CJ235_03150;Name=CJ235_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03150 PNGG01000001.1 Protein Homology CDS 624484 625443 . - 0 ID=cds-PMC20690.1;Parent=gene-CJ235_03150;Dbxref=NCBI_GP:PMC20690.1;Name=PMC20690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472524.1;locus_tag=CJ235_03150;product=iron ABC transporter permease;protein_id=PMC20690.1;transl_table=11 PNGG01000001.1 Genbank gene 625620 625967 . + . ID=gene-CJ235_03155;Name=CJ235_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03155 PNGG01000001.1 GeneMarkS+ CDS 625620 625967 . + 0 ID=cds-PMC20691.1;Parent=gene-CJ235_03155;Dbxref=NCBI_GP:PMC20691.1;Name=PMC20691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03155;product=hypothetical protein;protein_id=PMC20691.1;transl_table=11 PNGG01000001.1 Genbank gene 625969 626157 . + . ID=gene-CJ235_03160;Name=CJ235_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03160 PNGG01000001.1 Protein Homology CDS 625969 626157 . + 0 ID=cds-PMC20692.1;Parent=gene-CJ235_03160;Dbxref=NCBI_GP:PMC20692.1;Name=PMC20692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472562.1;locus_tag=CJ235_03160;product=transcriptional regulator;protein_id=PMC20692.1;transl_table=11 PNGG01000001.1 Genbank gene 626311 627189 . - . ID=gene-CJ235_03165;Name=CJ235_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03165 PNGG01000001.1 Protein Homology CDS 626311 627189 . - 0 ID=cds-PMC20693.1;Parent=gene-CJ235_03165;Dbxref=NCBI_GP:PMC20693.1;Name=PMC20693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472560.1;locus_tag=CJ235_03165;product=ABC transporter substrate-binding protein;protein_id=PMC20693.1;transl_table=11 PNGG01000001.1 Genbank gene 627249 627899 . - . ID=gene-CJ235_03170;Name=CJ235_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03170 PNGG01000001.1 Protein Homology CDS 627249 627899 . - 0 ID=cds-PMC20694.1;Parent=gene-CJ235_03170;Dbxref=NCBI_GP:PMC20694.1;Name=PMC20694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472613.1;locus_tag=CJ235_03170;product=endonuclease III;protein_id=PMC20694.1;transl_table=11 PNGG01000001.1 Genbank gene 628107 629768 . - . ID=gene-CJ235_03175;Name=CJ235_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03175 PNGG01000001.1 Protein Homology CDS 628107 629768 . - 0 ID=cds-PMC20695.1;Parent=gene-CJ235_03175;Dbxref=NCBI_GP:PMC20695.1;Name=PMC20695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763935.1;locus_tag=CJ235_03175;product=arginine--tRNA ligase;protein_id=PMC20695.1;transl_table=11 PNGG01000001.1 Genbank gene 629769 630182 . - . ID=gene-CJ235_03180;Name=CJ235_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03180 PNGG01000001.1 Protein Homology CDS 629769 630182 . - 0 ID=cds-PMC20696.1;Parent=gene-CJ235_03180;Dbxref=NCBI_GP:PMC20696.1;Name=PMC20696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472574.1;locus_tag=CJ235_03180;product=DUF1934 domain-containing protein;protein_id=PMC20696.1;transl_table=11 PNGG01000001.1 Genbank gene 630229 630735 . - . ID=gene-CJ235_03185;Name=CJ235_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03185 PNGG01000001.1 Protein Homology CDS 630229 630735 . - 0 ID=cds-PMC20697.1;Parent=gene-CJ235_03185;Dbxref=NCBI_GP:PMC20697.1;Name=PMC20697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452532.1;locus_tag=CJ235_03185;product=hypothetical protein;protein_id=PMC20697.1;transl_table=11 PNGG01000001.1 Genbank gene 630875 632173 . - . ID=gene-CJ235_03190;Name=CJ235_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03190 PNGG01000001.1 Protein Homology CDS 630875 632173 . - 0 ID=cds-PMC20698.1;Parent=gene-CJ235_03190;Dbxref=NCBI_GP:PMC20698.1;Name=PMC20698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763924.1;locus_tag=CJ235_03190;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=PMC20698.1;transl_table=11 PNGG01000001.1 Genbank gene 632190 632672 . - . ID=gene-CJ235_03195;Name=CJ235_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03195 PNGG01000001.1 Protein Homology CDS 632190 632672 . - 0 ID=cds-PMC20699.1;Parent=gene-CJ235_03195;Dbxref=NCBI_GP:PMC20699.1;Name=PMC20699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384652.1;locus_tag=CJ235_03195;product=N-acetyltransferase;protein_id=PMC20699.1;transl_table=11 PNGG01000001.1 Genbank gene 633149 633691 . - . ID=gene-CJ235_03200;Name=CJ235_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03200 PNGG01000001.1 Protein Homology CDS 633149 633691 . - 0 ID=cds-PMC20700.1;Parent=gene-CJ235_03200;Dbxref=NCBI_GP:PMC20700.1;Name=PMC20700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452529.1;locus_tag=CJ235_03200;product=flavodoxin family protein;protein_id=PMC20700.1;transl_table=11 PNGG01000001.1 Genbank gene 633846 634781 . - . ID=gene-CJ235_03205;Name=CJ235_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03205 PNGG01000001.1 Protein Homology CDS 633846 634781 . - 0 ID=cds-PMC20701.1;Parent=gene-CJ235_03205;Dbxref=NCBI_GP:PMC20701.1;Name=PMC20701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508429.1;locus_tag=CJ235_03205;product=aldo/keto reductase;protein_id=PMC20701.1;transl_table=11 PNGG01000001.1 Genbank gene 634991 635335 . - . ID=gene-CJ235_03210;Name=CJ235_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03210 PNGG01000001.1 Protein Homology CDS 634991 635335 . - 0 ID=cds-PMC20702.1;Parent=gene-CJ235_03210;Dbxref=NCBI_GP:PMC20702.1;Name=PMC20702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384672.1;locus_tag=CJ235_03210;product=DUF1450 domain-containing protein;protein_id=PMC20702.1;transl_table=11 PNGG01000001.1 Genbank gene 635634 636710 . - . ID=gene-CJ235_03215;Name=CJ235_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03215 PNGG01000001.1 Protein Homology CDS 635634 636710 . - 0 ID=cds-PMC20703.1;Parent=gene-CJ235_03215;Dbxref=NCBI_GP:PMC20703.1;Name=PMC20703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763918.1;locus_tag=CJ235_03215;product=phosphomevalonate kinase;protein_id=PMC20703.1;transl_table=11 PNGG01000001.1 Genbank gene 636723 637706 . - . ID=gene-CJ235_03220;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=CJ235_03220 PNGG01000001.1 Protein Homology CDS 636723 637706 . - 0 ID=cds-PMC20704.1;Parent=gene-CJ235_03220;Dbxref=NCBI_GP:PMC20704.1;Name=PMC20704.1;gbkey=CDS;gene=mvaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722666.1;locus_tag=CJ235_03220;product=diphosphomevalonate decarboxylase;protein_id=PMC20704.1;transl_table=11 PNGG01000001.1 Genbank gene 637710 638633 . - . ID=gene-CJ235_03225;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=CJ235_03225 PNGG01000001.1 Protein Homology CDS 637710 638633 . - 0 ID=cds-PMC20705.1;Parent=gene-CJ235_03225;Dbxref=NCBI_GP:PMC20705.1;Name=PMC20705.1;gbkey=CDS;gene=mvk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833097.1;locus_tag=CJ235_03225;product=mevalonate kinase;protein_id=PMC20705.1;transl_table=11 PNGG01000001.1 Genbank gene 639300 640133 . - . ID=gene-CJ235_03230;Name=CJ235_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03230 PNGG01000001.1 Protein Homology CDS 639300 640133 . - 0 ID=cds-PMC20706.1;Parent=gene-CJ235_03230;Dbxref=NCBI_GP:PMC20706.1;Name=PMC20706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763915.1;locus_tag=CJ235_03230;product=lipoate--protein ligase family protein;protein_id=PMC20706.1;transl_table=11 PNGG01000001.1 Genbank gene 640133 641119 . - . ID=gene-CJ235_03235;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CJ235_03235 PNGG01000001.1 Protein Homology CDS 640133 641119 . - 0 ID=cds-PMC20707.1;Parent=gene-CJ235_03235;Dbxref=NCBI_GP:PMC20707.1;Name=PMC20707.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512062.1;locus_tag=CJ235_03235;product=phosphate acetyltransferase;protein_id=PMC20707.1;transl_table=11 PNGG01000001.1 Genbank gene 641314 642063 . + . ID=gene-CJ235_03240;Name=CJ235_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03240 PNGG01000001.1 Protein Homology CDS 641314 642063 . + 0 ID=cds-PMC20708.1;Parent=gene-CJ235_03240;Dbxref=NCBI_GP:PMC20708.1;Name=PMC20708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763913.1;locus_tag=CJ235_03240;product=heme-dependent peroxidase;protein_id=PMC20708.1;transl_table=11 PNGG01000001.1 Genbank gene 642933 643706 . + . ID=gene-CJ235_03245;Name=CJ235_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03245 PNGG01000001.1 Protein Homology CDS 642933 643706 . + 0 ID=cds-PMC20709.1;Parent=gene-CJ235_03245;Dbxref=NCBI_GP:PMC20709.1;Name=PMC20709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472601.1;locus_tag=CJ235_03245;product=threonine/serine exporter;protein_id=PMC20709.1;transl_table=11 PNGG01000001.1 Genbank gene 643725 644177 . + . ID=gene-CJ235_03250;Name=CJ235_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03250 PNGG01000001.1 Protein Homology CDS 643725 644177 . + 0 ID=cds-PMC20710.1;Parent=gene-CJ235_03250;Dbxref=NCBI_GP:PMC20710.1;Name=PMC20710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763911.1;locus_tag=CJ235_03250;product=hypothetical protein;protein_id=PMC20710.1;transl_table=11 PNGG01000001.1 Genbank gene 644650 646137 . - . ID=gene-CJ235_03255;Name=CJ235_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03255 PNGG01000001.1 Protein Homology CDS 644650 646137 . - 0 ID=cds-PMC20711.1;Parent=gene-CJ235_03255;Dbxref=NCBI_GP:PMC20711.1;Name=PMC20711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722673.1;locus_tag=CJ235_03255;product=APC family permease;protein_id=PMC20711.1;transl_table=11 PNGG01000001.1 Genbank gene 646208 646570 . - . ID=gene-CJ235_03260;Name=CJ235_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03260 PNGG01000001.1 Protein Homology CDS 646208 646570 . - 0 ID=cds-PMC20813.1;Parent=gene-CJ235_03260;Dbxref=NCBI_GP:PMC20813.1;Name=PMC20813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468204.1;locus_tag=CJ235_03260;product=DUF423 domain-containing protein;protein_id=PMC20813.1;transl_table=11 PNGG01000001.1 Genbank gene 646595 646990 . - . ID=gene-CJ235_03265;Name=CJ235_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03265 PNGG01000001.1 Protein Homology CDS 646595 646990 . - 0 ID=cds-PMC20712.1;Parent=gene-CJ235_03265;Dbxref=NCBI_GP:PMC20712.1;Name=PMC20712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303770.1;locus_tag=CJ235_03265;product=hypothetical protein;protein_id=PMC20712.1;transl_table=11 PNGG01000001.1 Genbank gene 646998 647651 . - . ID=gene-CJ235_03270;Name=CJ235_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03270 PNGG01000001.1 Protein Homology CDS 646998 647651 . - 0 ID=cds-PMC20713.1;Parent=gene-CJ235_03270;Dbxref=NCBI_GP:PMC20713.1;Name=PMC20713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455260.1;locus_tag=CJ235_03270;product=uracil-DNA glycosylase;protein_id=PMC20713.1;transl_table=11 PNGG01000001.1 Genbank gene 647827 648657 . + . ID=gene-CJ235_03275;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CJ235_03275 PNGG01000001.1 Protein Homology CDS 647827 648657 . + 0 ID=cds-PMC20714.1;Parent=gene-CJ235_03275;Dbxref=NCBI_GP:PMC20714.1;Name=PMC20714.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CJ235_03275;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=PMC20714.1;transl_table=11 PNGG01000001.1 Genbank gene 649106 649279 . + . ID=gene-CJ235_03280;Name=CJ235_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03280 PNGG01000001.1 Protein Homology CDS 649106 649279 . + 0 ID=cds-PMC20715.1;Parent=gene-CJ235_03280;Dbxref=NCBI_GP:PMC20715.1;Name=PMC20715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176053.1;locus_tag=CJ235_03280;product=dephospho-CoA kinase;protein_id=PMC20715.1;transl_table=11 PNGG01000001.1 Genbank gene 649700 651097 . - . ID=gene-CJ235_03285;Name=CJ235_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03285 PNGG01000001.1 Protein Homology CDS 649700 651097 . - 0 ID=cds-PMC20716.1;Parent=gene-CJ235_03285;Dbxref=NCBI_GP:PMC20716.1;Name=PMC20716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472506.1;locus_tag=CJ235_03285;product=MFS transporter;protein_id=PMC20716.1;transl_table=11 PNGG01000001.1 Genbank gene 651288 651551 . - . ID=gene-CJ235_03290;Name=CJ235_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03290 PNGG01000001.1 GeneMarkS+ CDS 651288 651551 . - 0 ID=cds-PMC20717.1;Parent=gene-CJ235_03290;Dbxref=NCBI_GP:PMC20717.1;Name=PMC20717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03290;product=hypothetical protein;protein_id=PMC20717.1;transl_table=11 PNGG01000001.1 Genbank gene 651548 651931 . - . ID=gene-CJ235_03295;Name=CJ235_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03295 PNGG01000001.1 GeneMarkS+ CDS 651548 651931 . - 0 ID=cds-PMC20718.1;Parent=gene-CJ235_03295;Dbxref=NCBI_GP:PMC20718.1;Name=PMC20718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03295;product=VraC protein;protein_id=PMC20718.1;transl_table=11 PNGG01000001.1 Genbank gene 651903 653045 . - . ID=gene-CJ235_03300;Name=CJ235_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03300 PNGG01000001.1 Protein Homology CDS 651903 653045 . - 0 ID=cds-PMC20719.1;Parent=gene-CJ235_03300;Dbxref=NCBI_GP:PMC20719.1;Name=PMC20719.1;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508455.1;locus_tag=CJ235_03300;product=acetyl-CoA C-acyltransferase;protein_id=PMC20719.1;transl_table=11 PNGG01000001.1 Genbank gene 653042 654418 . - . ID=gene-CJ235_03305;Name=CJ235_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03305 PNGG01000001.1 Protein Homology CDS 653042 654418 . - 0 ID=cds-PMC20720.1;Parent=gene-CJ235_03305;Dbxref=NCBI_GP:PMC20720.1;Name=PMC20720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723542.1;locus_tag=CJ235_03305;product=acyl-CoA synthetase;protein_id=PMC20720.1;transl_table=11 PNGG01000001.1 Genbank gene 654791 655339 . - . ID=gene-CJ235_03310;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CJ235_03310 PNGG01000001.1 Protein Homology CDS 654791 655339 . - 0 ID=cds-PMC20721.1;Parent=gene-CJ235_03310;Dbxref=NCBI_GP:PMC20721.1;Name=PMC20721.1;gbkey=CDS;gene=hxlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303355.1;locus_tag=CJ235_03310;product=6-phospho-3-hexuloisomerase;protein_id=PMC20721.1;transl_table=11 PNGG01000001.1 Genbank gene 655341 655973 . - . ID=gene-CJ235_03315;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CJ235_03315 PNGG01000001.1 Protein Homology CDS 655341 655973 . - 0 ID=cds-PMC20722.1;Parent=gene-CJ235_03315;Dbxref=NCBI_GP:PMC20722.1;Name=PMC20722.1;gbkey=CDS;gene=hxlA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CJ235_03315;product=3-hexulose-6-phosphate synthase;protein_id=PMC20722.1;transl_table=11 PNGG01000001.1 Genbank gene 656374 656784 . + . ID=gene-CJ235_03320;Name=CJ235_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03320 PNGG01000001.1 Protein Homology CDS 656374 656784 . + 0 ID=cds-PMC20814.1;Parent=gene-CJ235_03320;Dbxref=NCBI_GP:PMC20814.1;Name=PMC20814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484091.1;locus_tag=CJ235_03320;product=DUF1806 domain-containing protein;protein_id=PMC20814.1;transl_table=11 PNGG01000001.1 Genbank gene 656796 657461 . + . ID=gene-CJ235_03325;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CJ235_03325 PNGG01000001.1 Protein Homology CDS 656796 657461 . + 0 ID=cds-PMC20723.1;Parent=gene-CJ235_03325;Dbxref=NCBI_GP:PMC20723.1;Name=PMC20723.1;gbkey=CDS;gene=bshB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763893.1;locus_tag=CJ235_03325;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=PMC20723.1;transl_table=11 PNGG01000001.1 Genbank gene 657477 658355 . + . ID=gene-CJ235_03330;Name=CJ235_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03330 PNGG01000001.1 Protein Homology CDS 657477 658355 . + 0 ID=cds-PMC20724.1;Parent=gene-CJ235_03330;Dbxref=NCBI_GP:PMC20724.1;Name=PMC20724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CJ235_03330;product=GTP cyclohydrolase I FolE2;protein_id=PMC20724.1;transl_table=11 PNGG01000001.1 Genbank gene 659335 659673 . + . ID=gene-CJ235_03335;Name=CJ235_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03335 PNGG01000001.1 Protein Homology CDS 659335 659673 . + 0 ID=cds-PMC20725.1;Parent=gene-CJ235_03335;Dbxref=NCBI_GP:PMC20725.1;Name=PMC20725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509528.1;locus_tag=CJ235_03335;product=MarR family transcriptional regulator;protein_id=PMC20725.1;transl_table=11 PNGG01000001.1 Genbank gene 659858 660424 . - . ID=gene-CJ235_03340;Name=CJ235_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03340 PNGG01000001.1 Protein Homology CDS 659858 660424 . - 0 ID=cds-PMC20726.1;Parent=gene-CJ235_03340;Dbxref=NCBI_GP:PMC20726.1;Name=PMC20726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484095.1;locus_tag=CJ235_03340;product=NAD(P)H-dependent oxidoreductase;protein_id=PMC20726.1;transl_table=11 PNGG01000001.1 Genbank gene 660441 661313 . - . ID=gene-CJ235_03345;Name=CJ235_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03345 PNGG01000001.1 Protein Homology CDS 660441 661313 . - 0 ID=cds-PMC20727.1;Parent=gene-CJ235_03345;Dbxref=NCBI_GP:PMC20727.1;Name=PMC20727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723524.1;locus_tag=CJ235_03345;product=Cof-type HAD-IIB family hydrolase;protein_id=PMC20727.1;transl_table=11 PNGG01000001.1 Genbank gene 661422 661916 . - . ID=gene-CJ235_03350;Name=CJ235_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03350 PNGG01000001.1 Protein Homology CDS 661422 661916 . - 0 ID=cds-PMC20728.1;Parent=gene-CJ235_03350;Dbxref=NCBI_GP:PMC20728.1;Name=PMC20728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484097.1;locus_tag=CJ235_03350;product=tRNA adenosine(34) deaminase TadA;protein_id=PMC20728.1;transl_table=11 PNGG01000001.1 Genbank gene 661981 662592 . + . ID=gene-CJ235_03355;Name=CJ235_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03355 PNGG01000001.1 Protein Homology CDS 661981 662592 . + 0 ID=cds-PMC20729.1;Parent=gene-CJ235_03355;Dbxref=NCBI_GP:PMC20729.1;Name=PMC20729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471169.1;locus_tag=CJ235_03355;product=deoxynucleoside kinase;protein_id=PMC20729.1;transl_table=11 PNGG01000001.1 Genbank gene 662592 663254 . + . ID=gene-CJ235_03360;Name=CJ235_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03360 PNGG01000001.1 Protein Homology CDS 662592 663254 . + 0 ID=cds-PMC20730.1;Parent=gene-CJ235_03360;Dbxref=NCBI_GP:PMC20730.1;Name=PMC20730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763880.1;locus_tag=CJ235_03360;product=deoxynucleoside kinase;protein_id=PMC20730.1;transl_table=11 PNGG01000001.1 Genbank gene 663400 663639 . - . ID=gene-CJ235_03365;Name=CJ235_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03365 PNGG01000001.1 GeneMarkS+ CDS 663400 663639 . - 0 ID=cds-PMC20731.1;Parent=gene-CJ235_03365;Dbxref=NCBI_GP:PMC20731.1;Name=PMC20731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03365;product=hypothetical protein;protein_id=PMC20731.1;transl_table=11 PNGG01000001.1 Genbank gene 663818 665851 . - . ID=gene-CJ235_03370;Name=CJ235_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03370 PNGG01000001.1 Protein Homology CDS 663818 665851 . - 0 ID=cds-PMC20732.1;Parent=gene-CJ235_03370;Dbxref=NCBI_GP:PMC20732.1;Name=PMC20732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CJ235_03370;product=AraC family transcriptional regulator;protein_id=PMC20732.1;transl_table=11 PNGG01000001.1 Genbank gene 666316 667470 . + . ID=gene-CJ235_03375;Name=CJ235_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03375 PNGG01000001.1 Protein Homology CDS 666316 667470 . + 0 ID=cds-PMC20733.1;Parent=gene-CJ235_03375;Dbxref=NCBI_GP:PMC20733.1;Name=PMC20733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168;locus_tag=CJ235_03375;product=hypothetical protein;protein_id=PMC20733.1;transl_table=11 PNGG01000001.1 Genbank gene 667668 667994 . - . ID=gene-CJ235_03380;Name=CJ235_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03380 PNGG01000001.1 Protein Homology CDS 667668 667994 . - 0 ID=cds-PMC20734.1;Parent=gene-CJ235_03380;Dbxref=NCBI_GP:PMC20734.1;Name=PMC20734.1;Note=iron regulated%3B catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471168.1;locus_tag=CJ235_03380;product=heme-degrading monooxygenase IsdI;protein_id=PMC20734.1;transl_table=11 PNGG01000001.1 Genbank gene 667999 668376 . - . ID=gene-CJ235_03385;Name=CJ235_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03385 PNGG01000001.1 Protein Homology CDS 667999 668376 . - 0 ID=cds-PMC20735.1;Parent=gene-CJ235_03385;Dbxref=NCBI_GP:PMC20735.1;Name=PMC20735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471173.1;locus_tag=CJ235_03385;product=DUF454 domain-containing protein;protein_id=PMC20735.1;transl_table=11 PNGG01000001.1 Genbank gene 668754 669155 . - . ID=gene-CJ235_03390;Name=CJ235_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03390 PNGG01000001.1 Protein Homology CDS 668754 669155 . - 0 ID=cds-PMC20815.1;Parent=gene-CJ235_03390;Dbxref=NCBI_GP:PMC20815.1;Name=PMC20815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508472.1;locus_tag=CJ235_03390;product=hypothetical protein;protein_id=PMC20815.1;transl_table=11 PNGG01000001.1 Genbank gene 669174 669869 . - . ID=gene-CJ235_03395;Name=CJ235_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03395 PNGG01000001.1 Protein Homology CDS 669174 669869 . - 0 ID=cds-PMC20816.1;Parent=gene-CJ235_03395;Dbxref=NCBI_GP:PMC20816.1;Name=PMC20816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508473.1;locus_tag=CJ235_03395;product=HAD family hydrolase;protein_id=PMC20816.1;transl_table=11 PNGG01000001.1 Genbank gene 670234 670815 . - . ID=gene-CJ235_03400;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CJ235_03400 PNGG01000001.1 Protein Homology CDS 670234 670815 . - 0 ID=cds-PMC20736.1;Parent=gene-CJ235_03400;Dbxref=NCBI_GP:PMC20736.1;Name=PMC20736.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471160.1;locus_tag=CJ235_03400;product=signal peptidase I;protein_id=PMC20736.1;transl_table=11 PNGG01000001.1 Genbank gene 670908 672287 . - . ID=gene-CJ235_03405;Name=CJ235_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03405 PNGG01000001.1 Protein Homology CDS 670908 672287 . - 0 ID=cds-PMC20737.1;Parent=gene-CJ235_03405;Dbxref=NCBI_GP:PMC20737.1;Name=PMC20737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488639.1;locus_tag=CJ235_03405;product=hypothetical protein;protein_id=PMC20737.1;transl_table=11 PNGG01000001.1 Genbank gene 672498 673574 . - . ID=gene-CJ235_03410;Name=CJ235_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03410 PNGG01000001.1 Protein Homology CDS 672498 673574 . - 0 ID=cds-PMC20738.1;Parent=gene-CJ235_03410;Dbxref=NCBI_GP:PMC20738.1;Name=PMC20738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763873.1;locus_tag=CJ235_03410;product=branched-chain amino acid aminotransferase;protein_id=PMC20738.1;transl_table=11 PNGG01000001.1 Genbank gene 673780 674739 . - . ID=gene-CJ235_03415;Name=CJ235_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03415 PNGG01000001.1 Protein Homology CDS 673780 674739 . - 0 ID=cds-PMC20739.1;Parent=gene-CJ235_03415;Dbxref=NCBI_GP:PMC20739.1;Name=PMC20739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452488.1;locus_tag=CJ235_03415;product=UDP-glucose 4-epimerase;protein_id=PMC20739.1;transl_table=11 PNGG01000001.1 Genbank gene 675029 675667 . + . ID=gene-CJ235_03420;Name=CJ235_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03420 PNGG01000001.1 Protein Homology CDS 675029 675667 . + 0 ID=cds-PMC20740.1;Parent=gene-CJ235_03420;Dbxref=NCBI_GP:PMC20740.1;Name=PMC20740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471155.1;locus_tag=CJ235_03420;product=elongation factor G-binding protein;protein_id=PMC20740.1;transl_table=11 PNGG01000001.1 Genbank gene 675819 676709 . - . ID=gene-CJ235_03425;Name=CJ235_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03425 PNGG01000001.1 Protein Homology CDS 675819 676709 . - 0 ID=cds-PMC20741.1;Parent=gene-CJ235_03425;Dbxref=NCBI_GP:PMC20741.1;Name=PMC20741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484107.1;locus_tag=CJ235_03425;product=LysR family transcriptional regulator;protein_id=PMC20741.1;transl_table=11 PNGG01000001.1 Genbank gene 676839 678020 . + . ID=gene-CJ235_03430;Name=CJ235_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03430 PNGG01000001.1 Protein Homology CDS 676839 678020 . + 0 ID=cds-PMC20742.1;Parent=gene-CJ235_03430;Dbxref=NCBI_GP:PMC20742.1;Name=PMC20742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471178.1;locus_tag=CJ235_03430;product=MFS transporter;protein_id=PMC20742.1;transl_table=11 PNGG01000001.1 Genbank gene 678225 678356 . - . ID=gene-CJ235_03435;Name=CJ235_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03435 PNGG01000001.1 Protein Homology CDS 678225 678356 . - 0 ID=cds-PMC20743.1;Parent=gene-CJ235_03435;Dbxref=NCBI_GP:PMC20743.1;Name=PMC20743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460485.1;locus_tag=CJ235_03435;product=beta-class phenol-soluble modulin;protein_id=PMC20743.1;transl_table=11 PNGG01000001.1 Genbank gene 678499 678630 . - . ID=gene-CJ235_03440;Name=CJ235_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03440 PNGG01000001.1 Protein Homology CDS 678499 678630 . - 0 ID=cds-PMC20744.1;Parent=gene-CJ235_03440;Dbxref=NCBI_GP:PMC20744.1;Name=PMC20744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460485.1;locus_tag=CJ235_03440;product=beta-class phenol-soluble modulin;protein_id=PMC20744.1;transl_table=11 PNGG01000001.1 Genbank gene 679214 679807 . - . ID=gene-CJ235_03445;Name=CJ235_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03445 PNGG01000001.1 Protein Homology CDS 679214 679807 . - 0 ID=cds-PMC20745.1;Parent=gene-CJ235_03445;Dbxref=NCBI_GP:PMC20745.1;Name=PMC20745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471165.1;locus_tag=CJ235_03445;product=histidine phosphatase family protein;protein_id=PMC20745.1;transl_table=11 PNGG01000001.1 Genbank gene 680025 680966 . + . ID=gene-CJ235_03450;Name=CJ235_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03450 PNGG01000001.1 Protein Homology CDS 680025 680966 . + 0 ID=cds-PMC20746.1;Parent=gene-CJ235_03450;Dbxref=NCBI_GP:PMC20746.1;Name=PMC20746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471162.1;locus_tag=CJ235_03450;product=agmatinase;protein_id=PMC20746.1;transl_table=11 PNGG01000001.1 Genbank gene 681015 682232 . + . ID=gene-CJ235_03455;Name=CJ235_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03455 PNGG01000001.1 Protein Homology CDS 681015 682232 . + 0 ID=cds-PMC20747.1;Parent=gene-CJ235_03455;Dbxref=NCBI_GP:PMC20747.1;Name=PMC20747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471174.1;locus_tag=CJ235_03455;product=divalent metal cation transporter;protein_id=PMC20747.1;transl_table=11 PNGG01000001.1 Genbank gene 682543 682743 . + . ID=gene-CJ235_03460;Name=CJ235_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03460 PNGG01000001.1 GeneMarkS+ CDS 682543 682743 . + 0 ID=cds-PMC20748.1;Parent=gene-CJ235_03460;Dbxref=NCBI_GP:PMC20748.1;Name=PMC20748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03460;product=hypothetical protein;protein_id=PMC20748.1;transl_table=11 PNGG01000001.1 Genbank gene 683006 683203 . + . ID=gene-CJ235_03465;Name=CJ235_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03465 PNGG01000001.1 Protein Homology CDS 683006 683203 . + 0 ID=cds-PMC20749.1;Parent=gene-CJ235_03465;Dbxref=NCBI_GP:PMC20749.1;Name=PMC20749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451533.1;locus_tag=CJ235_03465;product=hypothetical protein;protein_id=PMC20749.1;transl_table=11 PNGG01000001.1 Genbank gene 683299 684372 . - . ID=gene-CJ235_03470;Name=CJ235_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03470 PNGG01000001.1 Protein Homology CDS 683299 684372 . - 0 ID=cds-PMC20750.1;Parent=gene-CJ235_03470;Dbxref=NCBI_GP:PMC20750.1;Name=PMC20750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471183.1;locus_tag=CJ235_03470;product=amidohydrolase;protein_id=PMC20750.1;transl_table=11 PNGG01000001.1 cmsearch riboswitch 684633 684735 . + . ID=id-PNGG01000001.1:684633..684735;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000001.1 Genbank gene 685086 686822 . + . ID=gene-CJ235_03475;Name=CJ235_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03475 PNGG01000001.1 Protein Homology CDS 685086 686822 . + 0 ID=cds-PMC20751.1;Parent=gene-CJ235_03475;Dbxref=NCBI_GP:PMC20751.1;Name=PMC20751.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383142.1;locus_tag=CJ235_03475;product=phosphomethylpyrimidine synthase ThiC;protein_id=PMC20751.1;transl_table=11 PNGG01000001.1 Genbank gene 687751 688692 . + . ID=gene-CJ235_03480;Name=CJ235_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03480 PNGG01000001.1 Protein Homology CDS 687751 688692 . + 0 ID=cds-PMC20752.1;Parent=gene-CJ235_03480;Dbxref=NCBI_GP:PMC20752.1;Name=PMC20752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471517.1;locus_tag=CJ235_03480;product=lactate dehydrogenase;protein_id=PMC20752.1;transl_table=11 PNGG01000001.1 Genbank gene 689199 690278 . - . ID=gene-CJ235_03485;Name=CJ235_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03485 PNGG01000001.1 Protein Homology CDS 689199 690278 . - 0 ID=cds-PMC20753.1;Parent=gene-CJ235_03485;Dbxref=NCBI_GP:PMC20753.1;Name=PMC20753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471513.1;locus_tag=CJ235_03485;product=aldo/keto reductase;protein_id=PMC20753.1;transl_table=11 PNGG01000001.1 Genbank gene 690548 690940 . + . ID=gene-CJ235_03490;Name=CJ235_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03490 PNGG01000001.1 Protein Homology CDS 690548 690940 . + 0 ID=cds-PMC20754.1;Parent=gene-CJ235_03490;Dbxref=NCBI_GP:PMC20754.1;Name=PMC20754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382220.1;locus_tag=CJ235_03490;product=hypothetical protein;protein_id=PMC20754.1;transl_table=11 PNGG01000001.1 Genbank gene 690956 691621 . + . ID=gene-CJ235_03495;Name=CJ235_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03495 PNGG01000001.1 GeneMarkS+ CDS 690956 691621 . + 0 ID=cds-PMC20755.1;Parent=gene-CJ235_03495;Dbxref=NCBI_GP:PMC20755.1;Name=PMC20755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03495;product=hypothetical protein;protein_id=PMC20755.1;transl_table=11 PNGG01000001.1 Genbank gene 691758 692003 . - . ID=gene-CJ235_03500;Name=CJ235_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03500 PNGG01000001.1 GeneMarkS+ CDS 691758 692003 . - 0 ID=cds-PMC20756.1;Parent=gene-CJ235_03500;Dbxref=NCBI_GP:PMC20756.1;Name=PMC20756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03500;product=hypothetical protein;protein_id=PMC20756.1;transl_table=11 PNGG01000001.1 Genbank gene 692082 693278 . - . ID=gene-CJ235_03505;Name=CJ235_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03505 PNGG01000001.1 Protein Homology CDS 692082 693278 . - 0 ID=cds-PMC20757.1;Parent=gene-CJ235_03505;Dbxref=NCBI_GP:PMC20757.1;Name=PMC20757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451534.1;locus_tag=CJ235_03505;product=ABC transporter permease;protein_id=PMC20757.1;transl_table=11 PNGG01000001.1 Genbank gene 693275 693955 . - . ID=gene-CJ235_03510;Name=CJ235_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03510 PNGG01000001.1 Protein Homology CDS 693275 693955 . - 0 ID=cds-PMC20758.1;Parent=gene-CJ235_03510;Dbxref=NCBI_GP:PMC20758.1;Name=PMC20758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765961.1;locus_tag=CJ235_03510;product=ABC transporter ATP-binding protein;protein_id=PMC20758.1;transl_table=11 PNGG01000001.1 Genbank gene 693952 695046 . - . ID=gene-CJ235_03515;Name=CJ235_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03515 PNGG01000001.1 Protein Homology CDS 693952 695046 . - 0 ID=cds-PMC20759.1;Parent=gene-CJ235_03515;Dbxref=NCBI_GP:PMC20759.1;Name=PMC20759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471499.1;locus_tag=CJ235_03515;product=RND transporter;protein_id=PMC20759.1;transl_table=11 PNGG01000001.1 Genbank gene 695284 695898 . + . ID=gene-CJ235_03520;Name=CJ235_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03520 PNGG01000001.1 Protein Homology CDS 695284 695898 . + 0 ID=cds-PMC20760.1;Parent=gene-CJ235_03520;Dbxref=NCBI_GP:PMC20760.1;Name=PMC20760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471492.1;locus_tag=CJ235_03520;product=YIP1 family protein;protein_id=PMC20760.1;transl_table=11 PNGG01000001.1 Genbank gene 696035 696448 . - . ID=gene-CJ235_03525;Name=CJ235_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03525 PNGG01000001.1 GeneMarkS+ CDS 696035 696448 . - 0 ID=cds-PMC20761.1;Parent=gene-CJ235_03525;Dbxref=NCBI_GP:PMC20761.1;Name=PMC20761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03525;product=hypothetical protein;protein_id=PMC20761.1;transl_table=11 PNGG01000001.1 Genbank gene 696445 696660 . - . ID=gene-CJ235_03530;Name=CJ235_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03530 PNGG01000001.1 GeneMarkS+ CDS 696445 696660 . - 0 ID=cds-PMC20762.1;Parent=gene-CJ235_03530;Dbxref=NCBI_GP:PMC20762.1;Name=PMC20762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03530;product=hypothetical protein;protein_id=PMC20762.1;transl_table=11 PNGG01000001.1 Genbank gene 697028 697783 . - . ID=gene-CJ235_03535;Name=CJ235_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03535 PNGG01000001.1 Protein Homology CDS 697028 697783 . - 0 ID=cds-PMC20763.1;Parent=gene-CJ235_03535;Dbxref=NCBI_GP:PMC20763.1;Name=PMC20763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01435.16;locus_tag=CJ235_03535;product=hypothetical protein;protein_id=PMC20763.1;transl_table=11 PNGG01000001.1 Genbank gene 697873 698829 . - . ID=gene-CJ235_03540;Name=CJ235_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03540 PNGG01000001.1 Protein Homology CDS 697873 698829 . - 0 ID=cds-PMC20764.1;Parent=gene-CJ235_03540;Dbxref=NCBI_GP:PMC20764.1;Name=PMC20764.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471483.1;locus_tag=CJ235_03540;product=ornithine cyclodeaminase;protein_id=PMC20764.1;transl_table=11 PNGG01000001.1 Genbank gene 699138 699689 . - . ID=gene-CJ235_03545;Name=CJ235_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03545 PNGG01000001.1 Protein Homology CDS 699138 699689 . - 0 ID=cds-PMC20765.1;Parent=gene-CJ235_03545;Dbxref=NCBI_GP:PMC20765.1;Name=PMC20765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434602.1;locus_tag=CJ235_03545;product=TetR/AcrR family transcriptional regulator;protein_id=PMC20765.1;transl_table=11 PNGG01000001.1 Genbank gene 699658 700050 . - . ID=gene-CJ235_03550;Name=CJ235_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03550 PNGG01000001.1 Protein Homology CDS 699658 700050 . - 0 ID=cds-PMC20817.1;Parent=gene-CJ235_03550;Dbxref=NCBI_GP:PMC20817.1;Name=PMC20817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425820.1;locus_tag=CJ235_03550;product=DUF3147 domain-containing protein;protein_id=PMC20817.1;transl_table=11 PNGG01000001.1 Genbank gene 700066 700428 . - . ID=gene-CJ235_03555;Name=CJ235_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03555 PNGG01000001.1 Protein Homology CDS 700066 700428 . - 0 ID=cds-PMC20766.1;Parent=gene-CJ235_03555;Dbxref=NCBI_GP:PMC20766.1;Name=PMC20766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425821.1;locus_tag=CJ235_03555;product=DUF3147 domain-containing protein;protein_id=PMC20766.1;transl_table=11 PNGG01000001.1 Genbank gene 700828 701334 . - . ID=gene-CJ235_03560;Name=CJ235_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03560 PNGG01000001.1 Protein Homology CDS 700828 701334 . - 0 ID=cds-PMC20767.1;Parent=gene-CJ235_03560;Dbxref=NCBI_GP:PMC20767.1;Name=PMC20767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468557.1;locus_tag=CJ235_03560;product=GNAT family N-acetyltransferase;protein_id=PMC20767.1;transl_table=11 PNGG01000001.1 Genbank gene 701697 702137 . + . ID=gene-CJ235_03565;Name=CJ235_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03565 PNGG01000001.1 Protein Homology CDS 701697 702137 . + 0 ID=cds-PMC20768.1;Parent=gene-CJ235_03565;Dbxref=NCBI_GP:PMC20768.1;Name=PMC20768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303833.1;locus_tag=CJ235_03565;product=hypothetical protein;protein_id=PMC20768.1;transl_table=11 PNGG01000001.1 Genbank gene 702212 703402 . - . ID=gene-CJ235_03570;Name=CJ235_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03570 PNGG01000001.1 Protein Homology CDS 702212 703402 . - 0 ID=cds-PMC20769.1;Parent=gene-CJ235_03570;Dbxref=NCBI_GP:PMC20769.1;Name=PMC20769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723029.1;locus_tag=CJ235_03570;product=glycine C-acetyltransferase;protein_id=PMC20769.1;transl_table=11 PNGG01000001.1 Genbank gene 703697 704878 . + . ID=gene-CJ235_03575;Name=CJ235_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03575 PNGG01000001.1 Protein Homology CDS 703697 704878 . + 0 ID=cds-PMC20770.1;Parent=gene-CJ235_03575;Dbxref=NCBI_GP:PMC20770.1;Name=PMC20770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471503.1;locus_tag=CJ235_03575;product=amidohydrolase;protein_id=PMC20770.1;transl_table=11 PNGG01000001.1 Genbank pseudogene 704996 705231 . - . ID=gene-CJ235_03580;Name=CJ235_03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_03580;pseudo=true PNGG01000001.1 Protein Homology CDS 704996 705231 . - 0 ID=cds-CJ235_03580;Parent=gene-CJ235_03580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466948.1;locus_tag=CJ235_03580;product=MBL fold hydrolase;pseudo=true;transl_table=11 PNGG01000001.1 Genbank gene 705394 705468 . - . ID=gene-CJ235_03585;Name=CJ235_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03585 PNGG01000001.1 Protein Homology CDS 705394 705468 . - 0 ID=cds-PMC20818.1;Parent=gene-CJ235_03585;Dbxref=NCBI_GP:PMC20818.1;Name=PMC20818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834730.1;locus_tag=CJ235_03585;product=putative holin-like toxin;protein_id=PMC20818.1;transl_table=11 PNGG01000001.1 Genbank gene 705661 706848 . - . ID=gene-CJ235_03590;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CJ235_03590 PNGG01000001.1 Protein Homology CDS 705661 706848 . - 0 ID=cds-PMC20771.1;Parent=gene-CJ235_03590;Dbxref=NCBI_GP:PMC20771.1;Name=PMC20771.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763867.1;locus_tag=CJ235_03590;product=elongation factor Tu;protein_id=PMC20771.1;transl_table=11 PNGG01000001.1 Genbank gene 707113 709200 . - . ID=gene-CJ235_03595;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CJ235_03595 PNGG01000001.1 Protein Homology CDS 707113 709200 . - 0 ID=cds-PMC20772.1;Parent=gene-CJ235_03595;Dbxref=NCBI_GP:PMC20772.1;Name=PMC20772.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303836.1;locus_tag=CJ235_03595;product=elongation factor G;protein_id=PMC20772.1;transl_table=11 PNGG01000001.1 Genbank gene 709320 709790 . - . ID=gene-CJ235_03600;Name=CJ235_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03600 PNGG01000001.1 Protein Homology CDS 709320 709790 . - 0 ID=cds-PMC20773.1;Parent=gene-CJ235_03600;Dbxref=NCBI_GP:PMC20773.1;Name=PMC20773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CJ235_03600;product=30S ribosomal protein S7;protein_id=PMC20773.1;transl_table=11 PNGG01000001.1 Genbank gene 709861 710286 . - . ID=gene-CJ235_03605;Name=CJ235_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03605 PNGG01000001.1 Protein Homology CDS 709861 710286 . - 0 ID=cds-PMC20774.1;Parent=gene-CJ235_03605;Dbxref=NCBI_GP:PMC20774.1;Name=PMC20774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549969.1;locus_tag=CJ235_03605;product=30S ribosomal protein S12;protein_id=PMC20774.1;transl_table=11 PNGG01000001.1 Genbank gene 710380 710634 . - . ID=gene-CJ235_03610;Name=CJ235_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03610 PNGG01000001.1 Protein Homology CDS 710380 710634 . - 0 ID=cds-PMC20775.1;Parent=gene-CJ235_03610;Dbxref=NCBI_GP:PMC20775.1;Name=PMC20775.1;Note=in Bacillus subtilis this non-essential protein associates with the ribosome;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499098.1;locus_tag=CJ235_03610;product=50S ribosomal protein L7ae-like protein;protein_id=PMC20775.1;transl_table=11 PNGG01000001.1 Genbank gene 710901 711548 . + . ID=gene-CJ235_03615;Name=CJ235_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03615 PNGG01000001.1 Protein Homology CDS 710901 711548 . + 0 ID=cds-PMC20776.1;Parent=gene-CJ235_03615;Dbxref=NCBI_GP:PMC20776.1;Name=PMC20776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471477.1;locus_tag=CJ235_03615;product=HAD family hydrolase;protein_id=PMC20776.1;transl_table=11 PNGG01000001.1 Genbank gene 711674 715297 . - . ID=gene-CJ235_03620;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CJ235_03620 PNGG01000001.1 Protein Homology CDS 711674 715297 . - 0 ID=cds-PMC20777.1;Parent=gene-CJ235_03620;Dbxref=NCBI_GP:PMC20777.1;Name=PMC20777.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276717.1;locus_tag=CJ235_03620;product=DNA-directed RNA polymerase subunit beta';protein_id=PMC20777.1;transl_table=11 PNGG01000001.1 Genbank gene 715478 719023 . - . ID=gene-CJ235_03625;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CJ235_03625 PNGG01000001.1 Protein Homology CDS 715478 719023 . - 0 ID=cds-PMC20778.1;Parent=gene-CJ235_03625;Dbxref=NCBI_GP:PMC20778.1;Name=PMC20778.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459936.1;locus_tag=CJ235_03625;product=DNA-directed RNA polymerase subunit beta;protein_id=PMC20778.1;transl_table=11 PNGG01000001.1 Genbank gene 719229 719837 . - . ID=gene-CJ235_03630;Name=CJ235_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03630 PNGG01000001.1 Protein Homology CDS 719229 719837 . - 0 ID=cds-PMC20779.1;Parent=gene-CJ235_03630;Dbxref=NCBI_GP:PMC20779.1;Name=PMC20779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=CJ235_03630;product=class I SAM-dependent methyltransferase;protein_id=PMC20779.1;transl_table=11 PNGG01000001.1 Genbank gene 720063 720431 . - . ID=gene-CJ235_03635;Name=CJ235_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03635 PNGG01000001.1 Protein Homology CDS 720063 720431 . - 0 ID=cds-PMC20780.1;Parent=gene-CJ235_03635;Dbxref=NCBI_GP:PMC20780.1;Name=PMC20780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CJ235_03635;product=50S ribosomal protein L7/L12;protein_id=PMC20780.1;transl_table=11 PNGG01000001.1 Genbank gene 720524 721033 . - . ID=gene-CJ235_03640;Name=CJ235_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03640 PNGG01000001.1 Protein Homology CDS 720524 721033 . - 0 ID=cds-PMC20781.1;Parent=gene-CJ235_03640;Dbxref=NCBI_GP:PMC20781.1;Name=PMC20781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723038.1;locus_tag=CJ235_03640;product=50S ribosomal protein L10;protein_id=PMC20781.1;transl_table=11 PNGG01000001.1 Genbank gene 721345 722040 . - . ID=gene-CJ235_03645;Name=CJ235_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03645 PNGG01000001.1 Protein Homology CDS 721345 722040 . - 0 ID=cds-PMC20782.1;Parent=gene-CJ235_03645;Dbxref=NCBI_GP:PMC20782.1;Name=PMC20782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CJ235_03645;product=50S ribosomal protein L1;protein_id=PMC20782.1;transl_table=11 PNGG01000001.1 Genbank gene 722378 722800 . - . ID=gene-CJ235_03650;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CJ235_03650 PNGG01000001.1 Protein Homology CDS 722378 722800 . - 0 ID=cds-PMC20783.1;Parent=gene-CJ235_03650;Dbxref=NCBI_GP:PMC20783.1;Name=PMC20783.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CJ235_03650;product=50S ribosomal protein L11;protein_id=PMC20783.1;transl_table=11 PNGG01000001.1 Genbank gene 722971 723519 . - . ID=gene-CJ235_03655;Name=CJ235_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03655 PNGG01000001.1 Protein Homology CDS 722971 723519 . - 0 ID=cds-PMC20784.1;Parent=gene-CJ235_03655;Dbxref=NCBI_GP:PMC20784.1;Name=PMC20784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CJ235_03655;product=transcription termination/antitermination protein NusG;protein_id=PMC20784.1;transl_table=11 PNGG01000001.1 Genbank gene 723534 723713 . - . ID=gene-CJ235_03660;Name=CJ235_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03660 PNGG01000001.1 Protein Homology CDS 723534 723713 . - 0 ID=cds-PMC20785.1;Parent=gene-CJ235_03660;Dbxref=NCBI_GP:PMC20785.1;Name=PMC20785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509413.1;locus_tag=CJ235_03660;product=preprotein translocase subunit SecE;protein_id=PMC20785.1;transl_table=11 PNGG01000001.1 Genbank gene 723852 723995 . - . ID=gene-CJ235_03665;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CJ235_03665 PNGG01000001.1 Protein Homology CDS 723852 723995 . - 0 ID=cds-PMC20786.1;Parent=gene-CJ235_03665;Dbxref=NCBI_GP:PMC20786.1;Name=PMC20786.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508576.1;locus_tag=CJ235_03665;product=50S ribosomal protein L33;protein_id=PMC20786.1;transl_table=11 PNGG01000001.1 Genbank gene 724186 724773 . - . ID=gene-CJ235_03670;Name=CJ235_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03670 PNGG01000001.1 Protein Homology CDS 724186 724773 . - 0 ID=cds-PMC20787.1;Parent=gene-CJ235_03670;Dbxref=NCBI_GP:PMC20787.1;Name=PMC20787.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937;locus_tag=CJ235_03670;product=sigma-70 family RNA polymerase sigma factor;protein_id=PMC20787.1;transl_table=11 PNGG01000001.1 Genbank gene 724843 725370 . - . ID=gene-CJ235_03675;Name=CJ235_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03675 PNGG01000001.1 Protein Homology CDS 724843 725370 . - 0 ID=cds-PMC20788.1;Parent=gene-CJ235_03675;Dbxref=NCBI_GP:PMC20788.1;Name=PMC20788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276728.1;locus_tag=CJ235_03675;product=hypothetical protein;protein_id=PMC20788.1;transl_table=11 PNGG01000001.1 Genbank gene 725367 726134 . - . ID=gene-CJ235_03680;Name=CJ235_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03680 PNGG01000001.1 Protein Homology CDS 725367 726134 . - 0 ID=cds-PMC20789.1;Parent=gene-CJ235_03680;Dbxref=NCBI_GP:PMC20789.1;Name=PMC20789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441083.1;locus_tag=CJ235_03680;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=PMC20789.1;transl_table=11 PNGG01000001.1 Genbank gene 726121 726510 . - . ID=gene-CJ235_03685;Name=CJ235_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03685 PNGG01000001.1 Protein Homology CDS 726121 726510 . - 0 ID=cds-PMC20790.1;Parent=gene-CJ235_03685;Dbxref=NCBI_GP:PMC20790.1;Name=PMC20790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508580.1;locus_tag=CJ235_03685;product=ribonuclease III;protein_id=PMC20790.1;transl_table=11 PNGG01000001.1 Genbank gene 726510 727913 . - . ID=gene-CJ235_03690;Name=CJ235_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03690 PNGG01000001.1 Protein Homology CDS 726510 727913 . - 0 ID=cds-PMC20791.1;Parent=gene-CJ235_03690;Dbxref=NCBI_GP:PMC20791.1;Name=PMC20791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471497.1;locus_tag=CJ235_03690;product=cysteine--tRNA ligase;protein_id=PMC20791.1;transl_table=11 PNGG01000001.1 Genbank gene 727897 728526 . - . ID=gene-CJ235_03695;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CJ235_03695 PNGG01000001.1 Protein Homology CDS 727897 728526 . - 0 ID=cds-PMC20819.1;Parent=gene-CJ235_03695;Dbxref=NCBI_GP:PMC20819.1;Name=PMC20819.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499083.1;locus_tag=CJ235_03695;product=serine acetyltransferase;protein_id=PMC20819.1;transl_table=11 PNGG01000001.1 Genbank gene 729068 730522 . - . ID=gene-CJ235_03700;Name=CJ235_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03700 PNGG01000001.1 Protein Homology CDS 729068 730522 . - 0 ID=cds-PMC20792.1;Parent=gene-CJ235_03700;Dbxref=NCBI_GP:PMC20792.1;Name=PMC20792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488394.1;locus_tag=CJ235_03700;product=glutamate--tRNA ligase;protein_id=PMC20792.1;transl_table=11 PNGG01000001.1 Genbank gene 730959 732017 . - . ID=gene-CJ235_03705;Name=CJ235_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03705 PNGG01000001.1 Protein Homology CDS 730959 732017 . - 0 ID=cds-PMC20793.1;Parent=gene-CJ235_03705;Dbxref=NCBI_GP:PMC20793.1;Name=PMC20793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451202.1;locus_tag=CJ235_03705;product=PIN/TRAM domain-containing protein;protein_id=PMC20793.1;transl_table=11 PNGG01000001.1 Genbank gene 732147 733517 . - . ID=gene-CJ235_03710;Name=CJ235_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03710 PNGG01000001.1 Protein Homology CDS 732147 733517 . - 0 ID=cds-PMC20794.1;Parent=gene-CJ235_03710;Dbxref=NCBI_GP:PMC20794.1;Name=PMC20794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471482.1;locus_tag=CJ235_03710;product=DNA repair protein RadA;protein_id=PMC20794.1;transl_table=11 PNGG01000001.1 Genbank gene 733858 736341 . - . ID=gene-CJ235_03715;Name=CJ235_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03715 PNGG01000001.1 Protein Homology CDS 733858 736341 . - 0 ID=cds-PMC20795.1;Parent=gene-CJ235_03715;Dbxref=NCBI_GP:PMC20795.1;Name=PMC20795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468585.1;locus_tag=CJ235_03715;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=PMC20795.1;transl_table=11 PNGG01000001.1 Genbank gene 736353 737363 . - . ID=gene-CJ235_03720;Name=CJ235_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03720 PNGG01000001.1 Protein Homology CDS 736353 737363 . - 0 ID=cds-PMC20796.1;Parent=gene-CJ235_03720;Dbxref=NCBI_GP:PMC20796.1;Name=PMC20796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509401.1;locus_tag=CJ235_03720;product=protein arginine kinase;protein_id=PMC20796.1;transl_table=11 PNGG01000001.1 Genbank gene 737356 737904 . - . ID=gene-CJ235_03725;Name=CJ235_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03725 PNGG01000001.1 Protein Homology CDS 737356 737904 . - 0 ID=cds-PMC20797.1;Parent=gene-CJ235_03725;Dbxref=NCBI_GP:PMC20797.1;Name=PMC20797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433344.1;locus_tag=CJ235_03725;product=excinuclease ABC subunit B;protein_id=PMC20797.1;transl_table=11 PNGG01000001.1 Genbank gene 737921 738382 . - . ID=gene-CJ235_03730;Name=CJ235_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03730 PNGG01000001.1 Protein Homology CDS 737921 738382 . - 0 ID=cds-PMC20798.1;Parent=gene-CJ235_03730;Dbxref=NCBI_GP:PMC20798.1;Name=PMC20798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CJ235_03730;product=CtsR family transcriptional regulator;protein_id=PMC20798.1;transl_table=11 PNGG01000001.1 Genbank gene 738543 739757 . + . ID=gene-CJ235_03735;Name=CJ235_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03735 PNGG01000001.1 Protein Homology CDS 738543 739757 . + 0 ID=cds-PMC20799.1;Parent=gene-CJ235_03735;Dbxref=NCBI_GP:PMC20799.1;Name=PMC20799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CJ235_03735;product=NupC/NupG family nucleoside CNT transporter;protein_id=PMC20799.1;transl_table=11 PNGG01000001.1 Genbank gene 739959 740534 . - . ID=gene-CJ235_03740;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=CJ235_03740 PNGG01000001.1 Protein Homology CDS 739959 740534 . - 0 ID=cds-PMC20800.1;Parent=gene-CJ235_03740;Dbxref=NCBI_GP:PMC20800.1;Name=PMC20800.1;gbkey=CDS;gene=pdxT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481307.1;locus_tag=CJ235_03740;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=PMC20800.1;transl_table=11 PNGG01000001.1 Genbank gene 740536 741423 . - . ID=gene-CJ235_03745;Name=CJ235_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03745 PNGG01000001.1 Protein Homology CDS 740536 741423 . - 0 ID=cds-PMC20801.1;Parent=gene-CJ235_03745;Dbxref=NCBI_GP:PMC20801.1;Name=PMC20801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CJ235_03745;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=PMC20801.1;transl_table=11 PNGG01000001.1 Genbank gene 741623 743005 . + . ID=gene-CJ235_03750;Name=CJ235_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03750 PNGG01000001.1 Protein Homology CDS 741623 743005 . + 0 ID=cds-PMC20802.1;Parent=gene-CJ235_03750;Dbxref=NCBI_GP:PMC20802.1;Name=PMC20802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508593.1;locus_tag=CJ235_03750;product=PLP-dependent aminotransferase family protein;protein_id=PMC20802.1;transl_table=11 PNGG01000001.1 Genbank gene 743074 743188 . - . ID=gene-CJ235_03755;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_03755 PNGG01000001.1 cmsearch rRNA 743074 743188 . - . ID=rna-CJ235_03755;Parent=gene-CJ235_03755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_03755;product=5S ribosomal RNA PNGG01000001.1 cmsearch exon 743074 743188 . - . ID=exon-CJ235_03755-1;Parent=rna-CJ235_03755;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_03755;product=5S ribosomal RNA ##sequence-region PNGG01000010.1 1 27737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000010.1 Genbank region 1 27737 . + . ID=PNGG01000010.1:1..27737;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000010.1 Genbank gene 1 80 . - . ID=gene-CJ235_11675;Name=CJ235_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11675;partial=true;start_range=.,1 PNGG01000010.1 Protein Homology CDS 1 80 . - 0 ID=cds-PMC16910.1;Parent=gene-CJ235_11675;Dbxref=NCBI_GP:PMC16910.1;Name=PMC16910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015063485.1;locus_tag=CJ235_11675;partial=true;product=IS6 family transposase;protein_id=PMC16910.1;start_range=.,1;transl_table=11 PNGG01000010.1 Genbank gene 116 583 . + . ID=gene-CJ235_11680;Name=CJ235_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11680 PNGG01000010.1 Protein Homology CDS 116 583 . + 0 ID=cds-PMC16911.1;Parent=gene-CJ235_11680;Dbxref=NCBI_GP:PMC16911.1;Name=PMC16911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820328.1;locus_tag=CJ235_11680;product=replication protein;protein_id=PMC16911.1;transl_table=11 PNGG01000010.1 Genbank gene 1239 1856 . + . ID=gene-CJ235_11685;Name=CJ235_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11685 PNGG01000010.1 Protein Homology CDS 1239 1856 . + 0 ID=cds-PMC16912.1;Parent=gene-CJ235_11685;Dbxref=NCBI_GP:PMC16912.1;Name=PMC16912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465246.1;locus_tag=CJ235_11685;product=cadmium transporter;protein_id=PMC16912.1;transl_table=11 PNGG01000010.1 Genbank gene 1875 2222 . + . ID=gene-CJ235_11690;Name=CJ235_11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11690 PNGG01000010.1 Protein Homology CDS 1875 2222 . + 0 ID=cds-PMC16913.1;Parent=gene-CJ235_11690;Dbxref=NCBI_GP:PMC16913.1;Name=PMC16913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366422.1;locus_tag=CJ235_11690;product=transcriptional regulator;protein_id=PMC16913.1;transl_table=11 PNGG01000010.1 Genbank gene 2839 3312 . + . ID=gene-CJ235_11695;Name=CJ235_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11695 PNGG01000010.1 Protein Homology CDS 2839 3312 . + 0 ID=cds-PMC16914.1;Parent=gene-CJ235_11695;Dbxref=NCBI_GP:PMC16914.1;Name=PMC16914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177993.1;locus_tag=CJ235_11695;product=hypothetical protein;protein_id=PMC16914.1;transl_table=11 PNGG01000010.1 Genbank gene 3426 3854 . + . ID=gene-CJ235_11700;Name=CJ235_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11700 PNGG01000010.1 Protein Homology CDS 3426 3854 . + 0 ID=cds-PMC16915.1;Parent=gene-CJ235_11700;Dbxref=NCBI_GP:PMC16915.1;Name=PMC16915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510652.1;locus_tag=CJ235_11700;product=Rrf2 family transcriptional regulator;protein_id=PMC16915.1;transl_table=11 PNGG01000010.1 Genbank gene 4215 4889 . + . ID=gene-CJ235_11705;Name=CJ235_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11705 PNGG01000010.1 Protein Homology CDS 4215 4889 . + 0 ID=cds-PMC16916.1;Parent=gene-CJ235_11705;Dbxref=NCBI_GP:PMC16916.1;Name=PMC16916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CJ235_11705;product=IS6 family transposase;protein_id=PMC16916.1;transl_table=11 PNGG01000010.1 Genbank pseudogene 4952 6271 . + . ID=gene-CJ235_11710;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=pseudogene;locus_tag=CJ235_11710;pseudo=true PNGG01000010.1 Protein Homology CDS 4952 6271 . + 0 ID=cds-CJ235_11710;Parent=gene-CJ235_11710;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=lacG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471306.1;locus_tag=CJ235_11710;product=6-phospho-beta-galactosidase;pseudo=true;transl_table=11 PNGG01000010.1 Genbank gene 6449 7294 . + . ID=gene-CJ235_11715;Name=CJ235_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11715 PNGG01000010.1 Protein Homology CDS 6449 7294 . + 0 ID=cds-PMC16917.1;Parent=gene-CJ235_11715;Dbxref=NCBI_GP:PMC16917.1;Name=PMC16917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471275.1;locus_tag=CJ235_11715;product=alpha/beta hydrolase;protein_id=PMC16917.1;transl_table=11 PNGG01000010.1 Genbank gene 7395 8402 . + . ID=gene-CJ235_11720;Name=CJ235_11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11720 PNGG01000010.1 Protein Homology CDS 7395 8402 . + 0 ID=cds-PMC16918.1;Parent=gene-CJ235_11720;Dbxref=NCBI_GP:PMC16918.1;Name=PMC16918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482647.1;locus_tag=CJ235_11720;product=NADP-dependent oxidoreductase;protein_id=PMC16918.1;transl_table=11 PNGG01000010.1 Genbank pseudogene 8417 9439 . + . ID=gene-CJ235_11725;Name=CJ235_11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_11725;pseudo=true PNGG01000010.1 Protein Homology CDS 8417 9439 . + 0 ID=cds-CJ235_11725;Parent=gene-CJ235_11725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506996.1;locus_tag=CJ235_11725;product=alcohol dehydrogenase;pseudo=true;transl_table=11 PNGG01000010.1 Genbank gene 9657 11237 . + . ID=gene-CJ235_11730;Name=CJ235_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11730 PNGG01000010.1 Protein Homology CDS 9657 11237 . + 0 ID=cds-PMC16919.1;Parent=gene-CJ235_11730;Dbxref=NCBI_GP:PMC16919.1;Name=PMC16919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468673.1;locus_tag=CJ235_11730;product=BCCT family transporter;protein_id=PMC16919.1;transl_table=11 PNGG01000010.1 Genbank gene 11385 11921 . + . ID=gene-CJ235_11735;Name=CJ235_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11735 PNGG01000010.1 Protein Homology CDS 11385 11921 . + 0 ID=cds-PMC16920.1;Parent=gene-CJ235_11735;Dbxref=NCBI_GP:PMC16920.1;Name=PMC16920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302617.1;locus_tag=CJ235_11735;product=alkaline shock response membrane anchor protein AmaP;protein_id=PMC16920.1;transl_table=11 PNGG01000010.1 Genbank gene 11934 12173 . + . ID=gene-CJ235_11740;Name=CJ235_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11740 PNGG01000010.1 Protein Homology CDS 11934 12173 . + 0 ID=cds-PMC16921.1;Parent=gene-CJ235_11740;Dbxref=NCBI_GP:PMC16921.1;Name=PMC16921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500910.1;locus_tag=CJ235_11740;product=DUF2273 domain-containing protein;protein_id=PMC16921.1;transl_table=11 PNGG01000010.1 Genbank gene 12230 12736 . + . ID=gene-CJ235_11745;Name=CJ235_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11745 PNGG01000010.1 Protein Homology CDS 12230 12736 . + 0 ID=cds-PMC16922.1;Parent=gene-CJ235_11745;Dbxref=NCBI_GP:PMC16922.1;Name=PMC16922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CJ235_11745;product=Asp23/Gls24 family envelope stress response protein;protein_id=PMC16922.1;transl_table=11 PNGG01000010.1 Genbank gene 12956 14908 . - . ID=gene-CJ235_11750;Name=CJ235_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11750 PNGG01000010.1 Protein Homology CDS 12956 14908 . - 0 ID=cds-PMC16923.1;Parent=gene-CJ235_11750;Dbxref=NCBI_GP:PMC16923.1;Name=PMC16923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04183.10%2CHMM:PF06276.10;locus_tag=CJ235_11750;product=sialic acid synthase;protein_id=PMC16923.1;transl_table=11 PNGG01000010.1 Genbank gene 15253 17025 . + . ID=gene-CJ235_11755;Name=CJ235_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11755 PNGG01000010.1 Protein Homology CDS 15253 17025 . + 0 ID=cds-PMC16924.1;Parent=gene-CJ235_11755;Dbxref=NCBI_GP:PMC16924.1;Name=PMC16924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471349.1;locus_tag=CJ235_11755;product=siderophore synthetase;protein_id=PMC16924.1;transl_table=11 PNGG01000010.1 Genbank gene 17013 18080 . + . ID=gene-CJ235_11760;Name=CJ235_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11760 PNGG01000010.1 Protein Homology CDS 17013 18080 . + 0 ID=cds-PMC16925.1;Parent=gene-CJ235_11760;Dbxref=NCBI_GP:PMC16925.1;Name=PMC16925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471325.1;locus_tag=CJ235_11760;product=alanine racemase;protein_id=PMC16925.1;transl_table=11 PNGG01000010.1 Genbank gene 18578 19951 . + . ID=gene-CJ235_11765;Name=CJ235_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11765 PNGG01000010.1 Protein Homology CDS 18578 19951 . + 0 ID=cds-PMC16926.1;Parent=gene-CJ235_11765;Dbxref=NCBI_GP:PMC16926.1;Name=PMC16926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509236.1;locus_tag=CJ235_11765;product=hypothetical protein;protein_id=PMC16926.1;transl_table=11 PNGG01000010.1 Genbank gene 20145 20453 . - . ID=gene-CJ235_11770;Name=CJ235_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11770 PNGG01000010.1 Protein Homology CDS 20145 20453 . - 0 ID=cds-PMC16927.1;Parent=gene-CJ235_11770;Dbxref=NCBI_GP:PMC16927.1;Name=PMC16927.1;Note=iron regulated%3B catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507008.1;locus_tag=CJ235_11770;product=heme-degrading monooxygenase IsdG;protein_id=PMC16927.1;transl_table=11 PNGG01000010.1 Genbank gene 20553 20813 . - . ID=gene-CJ235_11775;Name=CJ235_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11775 PNGG01000010.1 Protein Homology CDS 20553 20813 . - 0 ID=cds-PMC16928.1;Parent=gene-CJ235_11775;Dbxref=NCBI_GP:PMC16928.1;Name=PMC16928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722958.1;locus_tag=CJ235_11775;product=hypothetical protein;protein_id=PMC16928.1;transl_table=11 PNGG01000010.1 Genbank gene 21096 21602 . + . ID=gene-CJ235_11780;Name=CJ235_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11780 PNGG01000010.1 Protein Homology CDS 21096 21602 . + 0 ID=cds-PMC16929.1;Parent=gene-CJ235_11780;Dbxref=NCBI_GP:PMC16929.1;Name=PMC16929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482663.1;locus_tag=CJ235_11780;product=hypothetical protein;protein_id=PMC16929.1;transl_table=11 PNGG01000010.1 Genbank gene 21656 22867 . + . ID=gene-CJ235_11785;Name=CJ235_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11785 PNGG01000010.1 Protein Homology CDS 21656 22867 . + 0 ID=cds-PMC16930.1;Parent=gene-CJ235_11785;Dbxref=NCBI_GP:PMC16930.1;Name=PMC16930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471320.1;locus_tag=CJ235_11785;product=UDPGP type 1 family protein;protein_id=PMC16930.1;transl_table=11 PNGG01000010.1 Genbank gene 22886 23569 . + . ID=gene-CJ235_11790;Name=CJ235_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11790 PNGG01000010.1 Protein Homology CDS 22886 23569 . + 0 ID=cds-PMC16931.1;Parent=gene-CJ235_11790;Dbxref=NCBI_GP:PMC16931.1;Name=PMC16931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275183.1;locus_tag=CJ235_11790;product=hemolysin III family protein;protein_id=PMC16931.1;transl_table=11 PNGG01000010.1 Genbank gene 23677 25014 . + . ID=gene-CJ235_11795;Name=CJ235_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11795 PNGG01000010.1 Protein Homology CDS 23677 25014 . + 0 ID=cds-PMC16932.1;Parent=gene-CJ235_11795;Dbxref=NCBI_GP:PMC16932.1;Name=PMC16932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471266.1;locus_tag=CJ235_11795;product=MFS transporter;protein_id=PMC16932.1;transl_table=11 PNGG01000010.1 Genbank gene 25095 25550 . + . ID=gene-CJ235_11800;Name=CJ235_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11800 PNGG01000010.1 Protein Homology CDS 25095 25550 . + 0 ID=cds-PMC16933.1;Parent=gene-CJ235_11800;Dbxref=NCBI_GP:PMC16933.1;Name=PMC16933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471295.1;locus_tag=CJ235_11800;product=multidrug resistance protein SepA;protein_id=PMC16933.1;transl_table=11 PNGG01000010.1 Genbank gene 25698 26768 . + . ID=gene-CJ235_11805;Name=CJ235_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11805 PNGG01000010.1 Protein Homology CDS 25698 26768 . + 0 ID=cds-PMC16934.1;Parent=gene-CJ235_11805;Dbxref=NCBI_GP:PMC16934.1;Name=PMC16934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509227.1;locus_tag=CJ235_11805;product=chromosome partitioning protein ParA;protein_id=PMC16934.1;transl_table=11 PNGG01000010.1 Genbank gene 27432 27737 . + . ID=gene-CJ235_11810;Name=CJ235_11810;end_range=27737,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_11810;partial=true PNGG01000010.1 Genbank rRNA 27432 27737 . + . ID=rna-CJ235_11810;Parent=gene-CJ235_11810;end_range=27737,.;gbkey=rRNA;locus_tag=CJ235_11810;partial=true;product=16S ribosomal RNA PNGG01000010.1 Genbank exon 27432 27737 . + . ID=exon-CJ235_11810-1;Parent=rna-CJ235_11810;end_range=27737,.;gbkey=rRNA;locus_tag=CJ235_11810;partial=true;product=16S ribosomal RNA ##sequence-region PNGG01000011.1 1 26231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000011.1 Genbank region 1 26231 . + . ID=PNGG01000011.1:1..26231;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000011.1 Genbank gene 3 589 . + . ID=gene-CJ235_11815;Name=CJ235_11815;end_range=589,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11815;partial=true PNGG01000011.1 Protein Homology CDS 3 589 . + 0 ID=cds-PMC16902.1;Parent=gene-CJ235_11815;Dbxref=NCBI_GP:PMC16902.1;Name=PMC16902.1;end_range=589,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02371.14;locus_tag=CJ235_11815;partial=true;product=hypothetical protein;protein_id=PMC16902.1;transl_table=11 PNGG01000011.1 Genbank gene 734 1453 . + . ID=gene-CJ235_11820;Name=CJ235_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11820 PNGG01000011.1 Protein Homology CDS 734 1453 . + 0 ID=cds-PMC16882.1;Parent=gene-CJ235_11820;Dbxref=NCBI_GP:PMC16882.1;Name=PMC16882.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02371.14;locus_tag=CJ235_11820;product=hypothetical protein;protein_id=PMC16882.1;transl_table=11 PNGG01000011.1 Genbank gene 1633 2574 . - . ID=gene-CJ235_11825;Name=CJ235_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11825 PNGG01000011.1 Protein Homology CDS 1633 2574 . - 0 ID=cds-PMC16883.1;Parent=gene-CJ235_11825;Dbxref=NCBI_GP:PMC16883.1;Name=PMC16883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CJ235_11825;product=3'-5' exoribonuclease YhaM;protein_id=PMC16883.1;transl_table=11 PNGG01000011.1 Genbank gene 2574 5507 . - . ID=gene-CJ235_11830;Name=CJ235_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11830 PNGG01000011.1 Protein Homology CDS 2574 5507 . - 0 ID=cds-PMC16884.1;Parent=gene-CJ235_11830;Dbxref=NCBI_GP:PMC16884.1;Name=PMC16884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471130.1;locus_tag=CJ235_11830;product=DNA repair protein Rad50;protein_id=PMC16884.1;transl_table=11 PNGG01000011.1 Genbank gene 5507 6694 . - . ID=gene-CJ235_11835;Name=CJ235_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11835 PNGG01000011.1 Protein Homology CDS 5507 6694 . - 0 ID=cds-PMC16885.1;Parent=gene-CJ235_11835;Dbxref=NCBI_GP:PMC16885.1;Name=PMC16885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471148.1;locus_tag=CJ235_11835;product=DNA repair exonuclease;protein_id=PMC16885.1;transl_table=11 PNGG01000011.1 Genbank gene 7322 7666 . - . ID=gene-CJ235_11840;Name=CJ235_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11840 PNGG01000011.1 Protein Homology CDS 7322 7666 . - 0 ID=cds-PMC16886.1;Parent=gene-CJ235_11840;Dbxref=NCBI_GP:PMC16886.1;Name=PMC16886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CJ235_11840;product=YlbF/YmcA family competence regulator;protein_id=PMC16886.1;transl_table=11 PNGG01000011.1 Genbank gene 7735 8865 . - . ID=gene-CJ235_11845;Name=CJ235_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11845 PNGG01000011.1 Protein Homology CDS 7735 8865 . - 0 ID=cds-PMC16887.1;Parent=gene-CJ235_11845;Dbxref=NCBI_GP:PMC16887.1;Name=PMC16887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507246.1;locus_tag=CJ235_11845;product=DUF445 domain-containing protein;protein_id=PMC16887.1;transl_table=11 PNGG01000011.1 Genbank gene 9129 9596 . - . ID=gene-CJ235_11850;Name=CJ235_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11850 PNGG01000011.1 Protein Homology CDS 9129 9596 . - 0 ID=cds-PMC16888.1;Parent=gene-CJ235_11850;Dbxref=NCBI_GP:PMC16888.1;Name=PMC16888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468125.1;locus_tag=CJ235_11850;product=transcriptional regulator;protein_id=PMC16888.1;transl_table=11 PNGG01000011.1 Genbank gene 10138 10761 . - . ID=gene-CJ235_11855;Name=CJ235_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11855 PNGG01000011.1 Protein Homology CDS 10138 10761 . - 0 ID=cds-PMC16889.1;Parent=gene-CJ235_11855;Dbxref=NCBI_GP:PMC16889.1;Name=PMC16889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765084.1;locus_tag=CJ235_11855;product=DNA-binding response regulator;protein_id=PMC16889.1;transl_table=11 PNGG01000011.1 Genbank gene 10775 11890 . - . ID=gene-CJ235_11860;Name=CJ235_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11860 PNGG01000011.1 Protein Homology CDS 10775 11890 . - 0 ID=cds-PMC16890.1;Parent=gene-CJ235_11860;Dbxref=NCBI_GP:PMC16890.1;Name=PMC16890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471132.1;locus_tag=CJ235_11860;product=histidine kinase;protein_id=PMC16890.1;transl_table=11 PNGG01000011.1 Genbank gene 12016 12849 . + . ID=gene-CJ235_11865;Name=CJ235_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11865 PNGG01000011.1 Protein Homology CDS 12016 12849 . + 0 ID=cds-PMC16891.1;Parent=gene-CJ235_11865;Dbxref=NCBI_GP:PMC16891.1;Name=PMC16891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471129.1;locus_tag=CJ235_11865;product=RluA family pseudouridine synthase;protein_id=PMC16891.1;transl_table=11 PNGG01000011.1 Genbank gene 13043 14428 . - . ID=gene-CJ235_11870;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CJ235_11870 PNGG01000011.1 Protein Homology CDS 13043 14428 . - 0 ID=cds-PMC16892.1;Parent=gene-CJ235_11870;Dbxref=NCBI_GP:PMC16892.1;Name=PMC16892.1;gbkey=CDS;gene=fumC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302807.1;locus_tag=CJ235_11870;product=class II fumarate hydratase;protein_id=PMC16892.1;transl_table=11 PNGG01000011.1 Genbank gene 14642 15055 . - . ID=gene-CJ235_11875;Name=CJ235_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11875 PNGG01000011.1 Protein Homology CDS 14642 15055 . - 0 ID=cds-PMC16893.1;Parent=gene-CJ235_11875;Dbxref=NCBI_GP:PMC16893.1;Name=PMC16893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471146.1;locus_tag=CJ235_11875;product=hypothetical protein;protein_id=PMC16893.1;transl_table=11 PNGG01000011.1 Genbank gene 15404 16003 . - . ID=gene-CJ235_11880;Name=CJ235_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11880 PNGG01000011.1 Protein Homology CDS 15404 16003 . - 0 ID=cds-PMC16894.1;Parent=gene-CJ235_11880;Dbxref=NCBI_GP:PMC16894.1;Name=PMC16894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468111.1;locus_tag=CJ235_11880;product=glucosamine-6-phosphate isomerase;protein_id=PMC16894.1;transl_table=11 PNGG01000011.1 Genbank gene 16143 16625 . - . ID=gene-CJ235_11885;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CJ235_11885 PNGG01000011.1 Protein Homology CDS 16143 16625 . - 0 ID=cds-PMC16895.1;Parent=gene-CJ235_11885;Dbxref=NCBI_GP:PMC16895.1;Name=PMC16895.1;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471142.1;locus_tag=CJ235_11885;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=PMC16895.1;transl_table=11 PNGG01000011.1 Genbank gene 16629 17756 . - . ID=gene-CJ235_11890;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CJ235_11890 PNGG01000011.1 Protein Homology CDS 16629 17756 . - 0 ID=cds-PMC16896.1;Parent=gene-CJ235_11890;Dbxref=NCBI_GP:PMC16896.1;Name=PMC16896.1;gbkey=CDS;gene=queG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471145.1;locus_tag=CJ235_11890;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=PMC16896.1;transl_table=11 PNGG01000011.1 Genbank gene 18040 18762 . - . ID=gene-CJ235_11895;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CJ235_11895 PNGG01000011.1 Protein Homology CDS 18040 18762 . - 0 ID=cds-PMC16897.1;Parent=gene-CJ235_11895;Dbxref=NCBI_GP:PMC16897.1;Name=PMC16897.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723190.1;locus_tag=CJ235_11895;product=amino acid ABC transporter ATP-binding protein;protein_id=PMC16897.1;transl_table=11 PNGG01000011.1 Genbank gene 18755 20221 . - . ID=gene-CJ235_11900;Name=CJ235_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11900 PNGG01000011.1 Protein Homology CDS 18755 20221 . - 0 ID=cds-PMC16898.1;Parent=gene-CJ235_11900;Dbxref=NCBI_GP:PMC16898.1;Name=PMC16898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507230.1;locus_tag=CJ235_11900;product=glutamate ABC transporter permease;protein_id=PMC16898.1;transl_table=11 PNGG01000011.1 Genbank gene 20488 21546 . - . ID=gene-CJ235_11905;Name=CJ235_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11905 PNGG01000011.1 Protein Homology CDS 20488 21546 . - 0 ID=cds-PMC16899.1;Parent=gene-CJ235_11905;Dbxref=NCBI_GP:PMC16899.1;Name=PMC16899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471135.1;locus_tag=CJ235_11905;product=PTS transporter subunit IIC;protein_id=PMC16899.1;transl_table=11 PNGG01000011.1 Genbank gene 21766 22716 . - . ID=gene-CJ235_11910;Name=CJ235_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11910 PNGG01000011.1 Protein Homology CDS 21766 22716 . - 0 ID=cds-PMC16900.1;Parent=gene-CJ235_11910;Dbxref=NCBI_GP:PMC16900.1;Name=PMC16900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471128.1;locus_tag=CJ235_11910;product=ABC transporter substrate-binding protein;protein_id=PMC16900.1;transl_table=11 PNGG01000011.1 Genbank gene 23001 23339 . + . ID=gene-CJ235_11915;Name=CJ235_11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11915 PNGG01000011.1 GeneMarkS+ CDS 23001 23339 . + 0 ID=cds-PMC16901.1;Parent=gene-CJ235_11915;Dbxref=NCBI_GP:PMC16901.1;Name=PMC16901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_11915;product=hypothetical protein;protein_id=PMC16901.1;transl_table=11 PNGG01000011.1 Genbank gene 23639 23725 . - . ID=gene-CJ235_11920;Name=CJ235_11920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11920 PNGG01000011.1 tRNAscan-SE tRNA 23639 23725 . - . ID=rna-CJ235_11920;Parent=gene-CJ235_11920;anticodon=(pos:complement(23689..23691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11920;product=tRNA-Leu PNGG01000011.1 tRNAscan-SE exon 23639 23725 . - . ID=exon-CJ235_11920-1;Parent=rna-CJ235_11920;anticodon=(pos:complement(23689..23691));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11920;product=tRNA-Leu PNGG01000011.1 Genbank gene 23955 24029 . - . ID=gene-CJ235_11925;Name=CJ235_11925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11925 PNGG01000011.1 tRNAscan-SE tRNA 23955 24029 . - . ID=rna-CJ235_11925;Parent=gene-CJ235_11925;anticodon=(pos:complement(23994..23996));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11925;product=tRNA-Gly PNGG01000011.1 tRNAscan-SE exon 23955 24029 . - . ID=exon-CJ235_11925-1;Parent=rna-CJ235_11925;anticodon=(pos:complement(23994..23996));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11925;product=tRNA-Gly PNGG01000011.1 Genbank gene 24048 24122 . - . ID=gene-CJ235_11930;Name=CJ235_11930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11930 PNGG01000011.1 tRNAscan-SE tRNA 24048 24122 . - . ID=rna-CJ235_11930;Parent=gene-CJ235_11930;anticodon=(pos:complement(24087..24089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11930;product=tRNA-Gly PNGG01000011.1 tRNAscan-SE exon 24048 24122 . - . ID=exon-CJ235_11930-1;Parent=rna-CJ235_11930;anticodon=(pos:complement(24087..24089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11930;product=tRNA-Gly PNGG01000011.1 Genbank gene 24131 24204 . - . ID=gene-CJ235_11935;Name=CJ235_11935;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11935 PNGG01000011.1 tRNAscan-SE tRNA 24131 24204 . - . ID=rna-CJ235_11935;Parent=gene-CJ235_11935;anticodon=(pos:complement(24170..24172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11935;product=tRNA-Cys PNGG01000011.1 tRNAscan-SE exon 24131 24204 . - . ID=exon-CJ235_11935-1;Parent=rna-CJ235_11935;anticodon=(pos:complement(24170..24172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11935;product=tRNA-Cys PNGG01000011.1 Genbank gene 24214 24285 . - . ID=gene-CJ235_11940;Name=CJ235_11940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11940 PNGG01000011.1 tRNAscan-SE tRNA 24214 24285 . - . ID=rna-CJ235_11940;Parent=gene-CJ235_11940;anticodon=(pos:complement(24251..24253));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11940;product=tRNA-Gln PNGG01000011.1 tRNAscan-SE exon 24214 24285 . - . ID=exon-CJ235_11940-1;Parent=rna-CJ235_11940;anticodon=(pos:complement(24251..24253));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11940;product=tRNA-Gln PNGG01000011.1 Genbank gene 24297 24369 . - . ID=gene-CJ235_11945;Name=CJ235_11945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11945 PNGG01000011.1 tRNAscan-SE tRNA 24297 24369 . - . ID=rna-CJ235_11945;Parent=gene-CJ235_11945;anticodon=(pos:complement(24334..24336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11945;product=tRNA-His PNGG01000011.1 tRNAscan-SE exon 24297 24369 . - . ID=exon-CJ235_11945-1;Parent=rna-CJ235_11945;anticodon=(pos:complement(24334..24336));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11945;product=tRNA-His PNGG01000011.1 Genbank gene 24372 24445 . - . ID=gene-CJ235_11950;Name=CJ235_11950;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11950 PNGG01000011.1 tRNAscan-SE tRNA 24372 24445 . - . ID=rna-CJ235_11950;Parent=gene-CJ235_11950;anticodon=(pos:complement(24411..24413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11950;product=tRNA-Trp PNGG01000011.1 tRNAscan-SE exon 24372 24445 . - . ID=exon-CJ235_11950-1;Parent=rna-CJ235_11950;anticodon=(pos:complement(24411..24413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11950;product=tRNA-Trp PNGG01000011.1 Genbank gene 24456 24540 . - . ID=gene-CJ235_11955;Name=CJ235_11955;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11955 PNGG01000011.1 tRNAscan-SE tRNA 24456 24540 . - . ID=rna-CJ235_11955;Parent=gene-CJ235_11955;anticodon=(pos:complement(24503..24505));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11955;product=tRNA-Tyr PNGG01000011.1 tRNAscan-SE exon 24456 24540 . - . ID=exon-CJ235_11955-1;Parent=rna-CJ235_11955;anticodon=(pos:complement(24503..24505));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11955;product=tRNA-Tyr PNGG01000011.1 Genbank gene 24549 24621 . - . ID=gene-CJ235_11960;Name=CJ235_11960;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11960 PNGG01000011.1 tRNAscan-SE tRNA 24549 24621 . - . ID=rna-CJ235_11960;Parent=gene-CJ235_11960;anticodon=(pos:complement(24586..24588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11960;product=tRNA-Thr PNGG01000011.1 tRNAscan-SE exon 24549 24621 . - . ID=exon-CJ235_11960-1;Parent=rna-CJ235_11960;anticodon=(pos:complement(24586..24588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11960;product=tRNA-Thr PNGG01000011.1 Genbank gene 24628 24700 . - . ID=gene-CJ235_11965;Name=CJ235_11965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11965 PNGG01000011.1 tRNAscan-SE tRNA 24628 24700 . - . ID=rna-CJ235_11965;Parent=gene-CJ235_11965;anticodon=(pos:complement(24665..24667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11965;product=tRNA-Phe PNGG01000011.1 tRNAscan-SE exon 24628 24700 . - . ID=exon-CJ235_11965-1;Parent=rna-CJ235_11965;anticodon=(pos:complement(24665..24667));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11965;product=tRNA-Phe PNGG01000011.1 Genbank gene 24705 24780 . - . ID=gene-CJ235_11970;Name=CJ235_11970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11970 PNGG01000011.1 tRNAscan-SE tRNA 24705 24780 . - . ID=rna-CJ235_11970;Parent=gene-CJ235_11970;anticodon=(pos:complement(24745..24747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11970;product=tRNA-Asp PNGG01000011.1 tRNAscan-SE exon 24705 24780 . - . ID=exon-CJ235_11970-1;Parent=rna-CJ235_11970;anticodon=(pos:complement(24745..24747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11970;product=tRNA-Asp PNGG01000011.1 Genbank gene 24789 24862 . - . ID=gene-CJ235_11975;Name=CJ235_11975;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11975 PNGG01000011.1 tRNAscan-SE tRNA 24789 24862 . - . ID=rna-CJ235_11975;Parent=gene-CJ235_11975;anticodon=(pos:complement(24826..24828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11975;product=tRNA-Met PNGG01000011.1 tRNAscan-SE exon 24789 24862 . - . ID=exon-CJ235_11975-1;Parent=rna-CJ235_11975;anticodon=(pos:complement(24826..24828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11975;product=tRNA-Met PNGG01000011.1 Genbank gene 24876 24965 . - . ID=gene-CJ235_11980;Name=CJ235_11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11980 PNGG01000011.1 tRNAscan-SE tRNA 24876 24965 . - . ID=rna-CJ235_11980;Parent=gene-CJ235_11980;anticodon=(pos:complement(24927..24929));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11980;product=tRNA-Ser PNGG01000011.1 tRNAscan-SE exon 24876 24965 . - . ID=exon-CJ235_11980-1;Parent=rna-CJ235_11980;anticodon=(pos:complement(24927..24929));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11980;product=tRNA-Ser PNGG01000011.1 Genbank gene 24995 25087 . - . ID=gene-CJ235_11985;Name=CJ235_11985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11985 PNGG01000011.1 tRNAscan-SE tRNA 24995 25087 . - . ID=rna-CJ235_11985;Parent=gene-CJ235_11985;anticodon=(pos:complement(25049..25051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11985;product=tRNA-Ser PNGG01000011.1 tRNAscan-SE exon 24995 25087 . - . ID=exon-CJ235_11985-1;Parent=rna-CJ235_11985;anticodon=(pos:complement(25049..25051));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11985;product=tRNA-Ser PNGG01000011.1 Genbank gene 25096 25169 . - . ID=gene-CJ235_11990;Name=CJ235_11990;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11990 PNGG01000011.1 tRNAscan-SE tRNA 25096 25169 . - . ID=rna-CJ235_11990;Parent=gene-CJ235_11990;anticodon=(pos:complement(25133..25135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11990;product=tRNA-Met PNGG01000011.1 tRNAscan-SE exon 25096 25169 . - . ID=exon-CJ235_11990-1;Parent=rna-CJ235_11990;anticodon=(pos:complement(25133..25135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11990;product=tRNA-Met PNGG01000011.1 Genbank gene 25195 25268 . - . ID=gene-CJ235_11995;Name=CJ235_11995;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11995 PNGG01000011.1 tRNAscan-SE tRNA 25195 25268 . - . ID=rna-CJ235_11995;Parent=gene-CJ235_11995;anticodon=(pos:complement(25232..25234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11995;product=tRNA-Met PNGG01000011.1 tRNAscan-SE exon 25195 25268 . - . ID=exon-CJ235_11995-1;Parent=rna-CJ235_11995;anticodon=(pos:complement(25232..25234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11995;product=tRNA-Met PNGG01000011.1 Genbank gene 25293 25368 . - . ID=gene-CJ235_12000;Name=CJ235_12000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12000 PNGG01000011.1 tRNAscan-SE tRNA 25293 25368 . - . ID=rna-CJ235_12000;Parent=gene-CJ235_12000;anticodon=(pos:complement(25333..25335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12000;product=tRNA-Ala PNGG01000011.1 tRNAscan-SE exon 25293 25368 . - . ID=exon-CJ235_12000-1;Parent=rna-CJ235_12000;anticodon=(pos:complement(25333..25335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12000;product=tRNA-Ala PNGG01000011.1 Genbank gene 25386 25459 . - . ID=gene-CJ235_12005;Name=CJ235_12005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12005 PNGG01000011.1 tRNAscan-SE tRNA 25386 25459 . - . ID=rna-CJ235_12005;Parent=gene-CJ235_12005;anticodon=(pos:complement(25423..25425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12005;product=tRNA-Pro PNGG01000011.1 tRNAscan-SE exon 25386 25459 . - . ID=exon-CJ235_12005-1;Parent=rna-CJ235_12005;anticodon=(pos:complement(25423..25425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12005;product=tRNA-Pro PNGG01000011.1 Genbank gene 25467 25540 . - . ID=gene-CJ235_12010;Name=CJ235_12010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12010 PNGG01000011.1 tRNAscan-SE tRNA 25467 25540 . - . ID=rna-CJ235_12010;Parent=gene-CJ235_12010;anticodon=(pos:complement(25504..25506));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12010;product=tRNA-Arg PNGG01000011.1 tRNAscan-SE exon 25467 25540 . - . ID=exon-CJ235_12010-1;Parent=rna-CJ235_12010;anticodon=(pos:complement(25504..25506));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12010;product=tRNA-Arg PNGG01000011.1 Genbank gene 25551 25640 . - . ID=gene-CJ235_12015;Name=CJ235_12015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12015 PNGG01000011.1 tRNAscan-SE tRNA 25551 25640 . - . ID=rna-CJ235_12015;Parent=gene-CJ235_12015;anticodon=(pos:complement(25604..25606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12015;product=tRNA-Leu PNGG01000011.1 tRNAscan-SE exon 25551 25640 . - . ID=exon-CJ235_12015-1;Parent=rna-CJ235_12015;anticodon=(pos:complement(25604..25606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12015;product=tRNA-Leu PNGG01000011.1 Genbank gene 25648 25722 . - . ID=gene-CJ235_12020;Name=CJ235_12020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12020 PNGG01000011.1 tRNAscan-SE tRNA 25648 25722 . - . ID=rna-CJ235_12020;Parent=gene-CJ235_12020;anticodon=(pos:complement(25688..25690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12020;product=tRNA-Gly PNGG01000011.1 tRNAscan-SE exon 25648 25722 . - . ID=exon-CJ235_12020-1;Parent=rna-CJ235_12020;anticodon=(pos:complement(25688..25690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12020;product=tRNA-Gly PNGG01000011.1 Genbank gene 25726 25808 . - . ID=gene-CJ235_12025;Name=CJ235_12025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12025 PNGG01000011.1 tRNAscan-SE tRNA 25726 25808 . - . ID=rna-CJ235_12025;Parent=gene-CJ235_12025;anticodon=(pos:complement(25772..25774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12025;product=tRNA-Leu PNGG01000011.1 tRNAscan-SE exon 25726 25808 . - . ID=exon-CJ235_12025-1;Parent=rna-CJ235_12025;anticodon=(pos:complement(25772..25774));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12025;product=tRNA-Leu PNGG01000011.1 Genbank gene 25815 25890 . - . ID=gene-CJ235_12030;Name=CJ235_12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12030 PNGG01000011.1 tRNAscan-SE tRNA 25815 25890 . - . ID=rna-CJ235_12030;Parent=gene-CJ235_12030;anticodon=(pos:complement(25855..25857));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12030;product=tRNA-Lys PNGG01000011.1 tRNAscan-SE exon 25815 25890 . - . ID=exon-CJ235_12030-1;Parent=rna-CJ235_12030;anticodon=(pos:complement(25855..25857));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12030;product=tRNA-Lys PNGG01000011.1 Genbank gene 25897 25972 . - . ID=gene-CJ235_12035;Name=CJ235_12035;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12035 PNGG01000011.1 tRNAscan-SE tRNA 25897 25972 . - . ID=rna-CJ235_12035;Parent=gene-CJ235_12035;anticodon=(pos:complement(25937..25939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12035;product=tRNA-Thr PNGG01000011.1 tRNAscan-SE exon 25897 25972 . - . ID=exon-CJ235_12035-1;Parent=rna-CJ235_12035;anticodon=(pos:complement(25937..25939));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12035;product=tRNA-Thr PNGG01000011.1 Genbank gene 25990 26065 . - . ID=gene-CJ235_12040;Name=CJ235_12040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12040 PNGG01000011.1 tRNAscan-SE tRNA 25990 26065 . - . ID=rna-CJ235_12040;Parent=gene-CJ235_12040;anticodon=(pos:complement(26030..26032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12040;product=tRNA-Val PNGG01000011.1 tRNAscan-SE exon 25990 26065 . - . ID=exon-CJ235_12040-1;Parent=rna-CJ235_12040;anticodon=(pos:complement(26030..26032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12040;product=tRNA-Val PNGG01000011.1 Genbank gene 26075 26189 . - . ID=gene-CJ235_12045;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_12045 PNGG01000011.1 cmsearch rRNA 26075 26189 . - . ID=rna-CJ235_12045;Parent=gene-CJ235_12045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_12045;product=5S ribosomal RNA PNGG01000011.1 cmsearch exon 26075 26189 . - . ID=exon-CJ235_12045-1;Parent=rna-CJ235_12045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_12045;product=5S ribosomal RNA ##sequence-region PNGG01000012.1 1 22691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000012.1 Genbank region 1 22691 . + . ID=PNGG01000012.1:1..22691;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000012.1 Genbank gene 645 1670 . + . ID=gene-CJ235_12050;Name=CJ235_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12050 PNGG01000012.1 Protein Homology CDS 645 1670 . + 0 ID=cds-PMC16779.1;Parent=gene-CJ235_12050;Dbxref=NCBI_GP:PMC16779.1;Name=PMC16779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472376.1;locus_tag=CJ235_12050;product=LysM peptidoglycan-binding domain-containing protein;protein_id=PMC16779.1;transl_table=11 PNGG01000012.1 Genbank gene 1985 2866 . + . ID=gene-CJ235_12055;Name=CJ235_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12055 PNGG01000012.1 Protein Homology CDS 1985 2866 . + 0 ID=cds-PMC16780.1;Parent=gene-CJ235_12055;Dbxref=NCBI_GP:PMC16780.1;Name=PMC16780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497171.1;locus_tag=CJ235_12055;product=mechanosensitive ion channel family protein;protein_id=PMC16780.1;transl_table=11 PNGG01000012.1 Genbank gene 2928 3203 . - . ID=gene-CJ235_12060;Name=CJ235_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12060 PNGG01000012.1 Protein Homology CDS 2928 3203 . - 0 ID=cds-PMC16781.1;Parent=gene-CJ235_12060;Dbxref=NCBI_GP:PMC16781.1;Name=PMC16781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472336.1;locus_tag=CJ235_12060;product=hypothetical protein;protein_id=PMC16781.1;transl_table=11 PNGG01000012.1 Genbank gene 3354 3818 . + . ID=gene-CJ235_12065;Name=CJ235_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12065 PNGG01000012.1 Protein Homology CDS 3354 3818 . + 0 ID=cds-PMC16782.1;Parent=gene-CJ235_12065;Dbxref=NCBI_GP:PMC16782.1;Name=PMC16782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472365.1;locus_tag=CJ235_12065;product=NUDIX domain-containing protein;protein_id=PMC16782.1;transl_table=11 PNGG01000012.1 Genbank gene 3775 4242 . + . ID=gene-CJ235_12070;Name=CJ235_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12070 PNGG01000012.1 Protein Homology CDS 3775 4242 . + 0 ID=cds-PMC16783.1;Parent=gene-CJ235_12070;Dbxref=NCBI_GP:PMC16783.1;Name=PMC16783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276793.1;locus_tag=CJ235_12070;product=GNAT family N-acetyltransferase;protein_id=PMC16783.1;transl_table=11 PNGG01000012.1 Genbank gene 4398 5201 . - . ID=gene-CJ235_12075;Name=CJ235_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12075 PNGG01000012.1 Protein Homology CDS 4398 5201 . - 0 ID=cds-PMC16784.1;Parent=gene-CJ235_12075;Dbxref=NCBI_GP:PMC16784.1;Name=PMC16784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472388.1;locus_tag=CJ235_12075;product=YibE/F-like protein;protein_id=PMC16784.1;transl_table=11 PNGG01000012.1 Genbank gene 5198 6310 . - . ID=gene-CJ235_12080;Name=CJ235_12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12080 PNGG01000012.1 Protein Homology CDS 5198 6310 . - 0 ID=cds-PMC16785.1;Parent=gene-CJ235_12080;Dbxref=NCBI_GP:PMC16785.1;Name=PMC16785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472364.1;locus_tag=CJ235_12080;product=YibE/F-like protein;protein_id=PMC16785.1;transl_table=11 PNGG01000012.1 Genbank gene 6549 6641 . + . ID=gene-CJ235_12085;Name=CJ235_12085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12085 PNGG01000012.1 tRNAscan-SE tRNA 6549 6641 . + . ID=rna-CJ235_12085;Parent=gene-CJ235_12085;anticodon=(pos:6585..6587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12085;product=tRNA-Ser PNGG01000012.1 tRNAscan-SE exon 6549 6641 . + . ID=exon-CJ235_12085-1;Parent=rna-CJ235_12085;anticodon=(pos:6585..6587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12085;product=tRNA-Ser PNGG01000012.1 Genbank gene 6937 7161 . - . ID=gene-CJ235_12090;Name=CJ235_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12090 PNGG01000012.1 GeneMarkS+ CDS 6937 7161 . - 0 ID=cds-PMC16786.1;Parent=gene-CJ235_12090;Dbxref=NCBI_GP:PMC16786.1;Name=PMC16786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_12090;product=hypothetical protein;protein_id=PMC16786.1;transl_table=11 PNGG01000012.1 Genbank gene 7326 8174 . - . ID=gene-CJ235_12095;Name=CJ235_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12095 PNGG01000012.1 Protein Homology CDS 7326 8174 . - 0 ID=cds-PMC16787.1;Parent=gene-CJ235_12095;Dbxref=NCBI_GP:PMC16787.1;Name=PMC16787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472363.1;locus_tag=CJ235_12095;product=serine protease;protein_id=PMC16787.1;transl_table=11 PNGG01000012.1 Genbank gene 8421 8849 . + . ID=gene-CJ235_12100;Name=CJ235_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12100 PNGG01000012.1 Protein Homology CDS 8421 8849 . + 0 ID=cds-PMC16788.1;Parent=gene-CJ235_12100;Dbxref=NCBI_GP:PMC16788.1;Name=PMC16788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01047.20;locus_tag=CJ235_12100;product=MarR family transcriptional regulator;protein_id=PMC16788.1;transl_table=11 PNGG01000012.1 Genbank gene 8881 10281 . + . ID=gene-CJ235_12105;Name=CJ235_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12105 PNGG01000012.1 Protein Homology CDS 8881 10281 . + 0 ID=cds-PMC16789.1;Parent=gene-CJ235_12105;Dbxref=NCBI_GP:PMC16789.1;Name=PMC16789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472353.1;locus_tag=CJ235_12105;product=MFS transporter;protein_id=PMC16789.1;transl_table=11 PNGG01000012.1 Genbank gene 10756 13158 . + . ID=gene-CJ235_12110;Name=CJ235_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12110 PNGG01000012.1 Protein Homology CDS 10756 13158 . + 0 ID=cds-PMC16790.1;Parent=gene-CJ235_12110;Dbxref=NCBI_GP:PMC16790.1;Name=PMC16790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435003.1;locus_tag=CJ235_12110;product=lipase;protein_id=PMC16790.1;transl_table=11 PNGG01000012.1 Genbank gene 13555 14985 . + . ID=gene-CJ235_12115;Name=CJ235_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12115 PNGG01000012.1 Protein Homology CDS 13555 14985 . + 0 ID=cds-PMC16791.1;Parent=gene-CJ235_12115;Dbxref=NCBI_GP:PMC16791.1;Name=PMC16791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472373.1;locus_tag=CJ235_12115;product=PTS trehalose transporter subunit IIBC;protein_id=PMC16791.1;transl_table=11 PNGG01000012.1 Genbank gene 15018 16679 . + . ID=gene-CJ235_12120;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CJ235_12120 PNGG01000012.1 Protein Homology CDS 15018 16679 . + 0 ID=cds-PMC16792.1;Parent=gene-CJ235_12120;Dbxref=NCBI_GP:PMC16792.1;Name=PMC16792.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472343.1;locus_tag=CJ235_12120;product=alpha%2Calpha-phosphotrehalase;protein_id=PMC16792.1;transl_table=11 PNGG01000012.1 Genbank gene 16683 17402 . + . ID=gene-CJ235_12125;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CJ235_12125 PNGG01000012.1 Protein Homology CDS 16683 17402 . + 0 ID=cds-PMC16793.1;Parent=gene-CJ235_12125;Dbxref=NCBI_GP:PMC16793.1;Name=PMC16793.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303885.1;locus_tag=CJ235_12125;product=trehalose operon repressor;protein_id=PMC16793.1;transl_table=11 PNGG01000012.1 Genbank gene 17524 17792 . + . ID=gene-CJ235_12130;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CJ235_12130 PNGG01000012.1 cmsearch SRP_RNA 17524 17792 . + . ID=rna-CJ235_12130;Parent=gene-CJ235_12130;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_12130;product=signal recognition particle sRNA large type PNGG01000012.1 cmsearch exon 17524 17792 . + . ID=exon-CJ235_12130-1;Parent=rna-CJ235_12130;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_12130;product=signal recognition particle sRNA large type PNGG01000012.1 Genbank gene 18223 18753 . + . ID=gene-CJ235_12135;Name=CJ235_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12135 PNGG01000012.1 Protein Homology CDS 18223 18753 . + 0 ID=cds-PMC16794.1;Parent=gene-CJ235_12135;Dbxref=NCBI_GP:PMC16794.1;Name=PMC16794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484226.1;locus_tag=CJ235_12135;product=N-acetyltransferase;protein_id=PMC16794.1;transl_table=11 PNGG01000012.1 Genbank gene 18811 20553 . + . ID=gene-CJ235_12140;Name=CJ235_12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12140 PNGG01000012.1 Protein Homology CDS 18811 20553 . + 0 ID=cds-PMC16795.1;Parent=gene-CJ235_12140;Dbxref=NCBI_GP:PMC16795.1;Name=PMC16795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454498.1;locus_tag=CJ235_12140;product=DNA polymerase III subunit gamma/tau;protein_id=PMC16795.1;transl_table=11 PNGG01000012.1 Genbank gene 20698 21015 . + . ID=gene-CJ235_12145;Name=CJ235_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12145 PNGG01000012.1 Protein Homology CDS 20698 21015 . + 0 ID=cds-PMC16796.1;Parent=gene-CJ235_12145;Dbxref=NCBI_GP:PMC16796.1;Name=PMC16796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479279.1;locus_tag=CJ235_12145;product=nucleoid-associated protein%2C YbaB/EbfC family;protein_id=PMC16796.1;transl_table=11 PNGG01000012.1 Genbank gene 21020 21616 . + . ID=gene-CJ235_12150;Name=CJ235_12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12150 PNGG01000012.1 Protein Homology CDS 21020 21616 . + 0 ID=cds-PMC16797.1;Parent=gene-CJ235_12150;Dbxref=NCBI_GP:PMC16797.1;Name=PMC16797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CJ235_12150;product=recombination protein RecR;protein_id=PMC16797.1;transl_table=11 ##sequence-region PNGG01000013.1 1 15379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000013.1 Genbank region 1 15379 . + . ID=PNGG01000013.1:1..15379;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000013.1 Genbank gene 1 2394 . + . ID=gene-CJ235_12155;Name=CJ235_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12155;partial=true;start_range=.,1 PNGG01000013.1 Protein Homology CDS 1 2394 . + 0 ID=cds-PMC16773.1;Parent=gene-CJ235_12155;Dbxref=NCBI_GP:PMC16773.1;Name=PMC16773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046165954.1;locus_tag=CJ235_12155;partial=true;product=hypothetical protein;protein_id=PMC16773.1;start_range=.,1;transl_table=11 PNGG01000013.1 Genbank gene 2529 3722 . + . ID=gene-CJ235_12160;Name=CJ235_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12160 PNGG01000013.1 Protein Homology CDS 2529 3722 . + 0 ID=cds-PMC16763.1;Parent=gene-CJ235_12160;Dbxref=NCBI_GP:PMC16763.1;Name=PMC16763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499755.1;locus_tag=CJ235_12160;product=accessory Sec system protein translocase subunit SecY2;protein_id=PMC16763.1;transl_table=11 PNGG01000013.1 Genbank gene 3736 5292 . + . ID=gene-CJ235_12165;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CJ235_12165 PNGG01000013.1 Protein Homology CDS 3736 5292 . + 0 ID=cds-PMC16764.1;Parent=gene-CJ235_12165;Dbxref=NCBI_GP:PMC16764.1;Name=PMC16764.1;gbkey=CDS;gene=asp1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385234.1;locus_tag=CJ235_12165;product=accessory Sec system protein Asp1;protein_id=PMC16764.1;transl_table=11 PNGG01000013.1 Genbank gene 5285 6829 . + . ID=gene-CJ235_12170;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CJ235_12170 PNGG01000013.1 Protein Homology CDS 5285 6829 . + 0 ID=cds-PMC16765.1;Parent=gene-CJ235_12170;Dbxref=NCBI_GP:PMC16765.1;Name=PMC16765.1;gbkey=CDS;gene=asp2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446818.1;locus_tag=CJ235_12170;product=accessory Sec system protein Asp2;protein_id=PMC16765.1;transl_table=11 PNGG01000013.1 Genbank gene 6831 7337 . + . ID=gene-CJ235_12175;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CJ235_12175 PNGG01000013.1 Protein Homology CDS 6831 7337 . + 0 ID=cds-PMC16766.1;Parent=gene-CJ235_12175;Dbxref=NCBI_GP:PMC16766.1;Name=PMC16766.1;gbkey=CDS;gene=asp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446819.1;locus_tag=CJ235_12175;product=accessory Sec system protein Asp3;protein_id=PMC16766.1;transl_table=11 PNGG01000013.1 Genbank gene 7359 9749 . + . ID=gene-CJ235_12180;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CJ235_12180 PNGG01000013.1 Protein Homology CDS 7359 9749 . + 0 ID=cds-PMC16767.1;Parent=gene-CJ235_12180;Dbxref=NCBI_GP:PMC16767.1;Name=PMC16767.1;gbkey=CDS;gene=secA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446820.1;locus_tag=CJ235_12180;product=accessory Sec system translocase SecA2;protein_id=PMC16767.1;transl_table=11 PNGG01000013.1 Genbank gene 9767 11278 . + . ID=gene-CJ235_12185;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=CJ235_12185 PNGG01000013.1 Protein Homology CDS 9767 11278 . + 0 ID=cds-PMC16768.1;Parent=gene-CJ235_12185;Dbxref=NCBI_GP:PMC16768.1;Name=PMC16768.1;gbkey=CDS;gene=gtfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496551.1;locus_tag=CJ235_12185;product=accessory Sec system glycosyltransferase GtfA;protein_id=PMC16768.1;transl_table=11 PNGG01000013.1 Genbank gene 11271 12611 . + . ID=gene-CJ235_12190;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CJ235_12190 PNGG01000013.1 Protein Homology CDS 11271 12611 . + 0 ID=cds-PMC16769.1;Parent=gene-CJ235_12190;Dbxref=NCBI_GP:PMC16769.1;Name=PMC16769.1;gbkey=CDS;gene=gtfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469606.1;locus_tag=CJ235_12190;product=accessory Sec system glycosylation chaperone GtfB;protein_id=PMC16769.1;transl_table=11 PNGG01000013.1 Genbank pseudogene 12920 13078 . - . ID=gene-CJ235_12195;Name=CJ235_12195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12195;pseudo=true PNGG01000013.1 Protein Homology CDS 12920 13078 . - 0 ID=cds-CJ235_12195;Parent=gene-CJ235_12195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497182.1;locus_tag=CJ235_12195;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 PNGG01000013.1 Genbank gene 13129 13803 . + . ID=gene-CJ235_12200;Name=CJ235_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12200 PNGG01000013.1 Protein Homology CDS 13129 13803 . + 0 ID=cds-PMC16770.1;Parent=gene-CJ235_12200;Dbxref=NCBI_GP:PMC16770.1;Name=PMC16770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CJ235_12200;product=IS6-like element IS257 family transposase;protein_id=PMC16770.1;transl_table=11 PNGG01000013.1 Genbank gene 13963 14238 . + . ID=gene-CJ235_12205;Name=CJ235_12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12205 PNGG01000013.1 GeneMarkS+ CDS 13963 14238 . + 0 ID=cds-PMC16771.1;Parent=gene-CJ235_12205;Dbxref=NCBI_GP:PMC16771.1;Name=PMC16771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_12205;product=hypothetical protein;protein_id=PMC16771.1;transl_table=11 PNGG01000013.1 Genbank gene 14351 15208 . - . ID=gene-CJ235_12210;Name=CJ235_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12210 PNGG01000013.1 Protein Homology CDS 14351 15208 . - 0 ID=cds-PMC16772.1;Parent=gene-CJ235_12210;Dbxref=NCBI_GP:PMC16772.1;Name=PMC16772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_863234.1;locus_tag=CJ235_12210;product=YitT family protein;protein_id=PMC16772.1;transl_table=11 ##sequence-region PNGG01000014.1 1 8568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000014.1 Genbank region 1 8568 . + . ID=PNGG01000014.1:1..8568;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000014.1 Genbank gene 60 734 . - . ID=gene-CJ235_12215;Name=CJ235_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12215 PNGG01000014.1 Protein Homology CDS 60 734 . - 0 ID=cds-PMC16688.1;Parent=gene-CJ235_12215;Dbxref=NCBI_GP:PMC16688.1;Name=PMC16688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CJ235_12215;product=IS6-like element IS257 family transposase;protein_id=PMC16688.1;transl_table=11 PNGG01000014.1 Genbank gene 800 1813 . + . ID=gene-CJ235_12220;Name=CJ235_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12220 PNGG01000014.1 Protein Homology CDS 800 1813 . + 0 ID=cds-PMC16689.1;Parent=gene-CJ235_12220;Dbxref=NCBI_GP:PMC16689.1;Name=PMC16689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437029.1;locus_tag=CJ235_12220;product=nuclease;protein_id=PMC16689.1;transl_table=11 PNGG01000014.1 Genbank pseudogene 2240 3742 . + . ID=gene-CJ235_12225;Name=CJ235_12225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12225;pseudo=true PNGG01000014.1 Protein Homology CDS 2240 3742 . + 0 ID=cds-CJ235_12225;Parent=gene-CJ235_12225;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979250.1;locus_tag=CJ235_12225;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PNGG01000014.1 Genbank gene 3791 4003 . + . ID=gene-CJ235_12230;Name=CJ235_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12230 PNGG01000014.1 Protein Homology CDS 3791 4003 . + 0 ID=cds-PMC16690.1;Parent=gene-CJ235_12230;Dbxref=NCBI_GP:PMC16690.1;Name=PMC16690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437026.1;locus_tag=CJ235_12230;product=hypothetical protein;protein_id=PMC16690.1;transl_table=11 PNGG01000014.1 Genbank pseudogene 4744 4854 . + . ID=gene-CJ235_12235;Name=CJ235_12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12235;pseudo=true PNGG01000014.1 Protein Homology CDS 4744 4854 . + 0 ID=cds-CJ235_12235;Parent=gene-CJ235_12235;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03715;locus_tag=CJ235_12235;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000014.1 Genbank pseudogene 5175 5648 . - . ID=gene-CJ235_12240;Name=CJ235_12240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12240;pseudo=true PNGG01000014.1 Protein Homology CDS 5175 5648 . - 0 ID=cds-CJ235_12240;Parent=gene-CJ235_12240;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475352.1;locus_tag=CJ235_12240;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000014.1 Genbank pseudogene 6201 8492 . - . ID=gene-CJ235_12245;Name=CJ235_12245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12245;pseudo=true PNGG01000014.1 Protein Homology CDS 6201 8492 . - 0 ID=cds-CJ235_12245;Parent=gene-CJ235_12245;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475349.1;locus_tag=CJ235_12245;product=chordopoxvirus G3 family protein;pseudo=true;transl_table=11 ##sequence-region PNGG01000015.1 1 4858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000015.1 Genbank region 1 4858 . + . ID=PNGG01000015.1:1..4858;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000015.1 Genbank pseudogene 112 267 . + . ID=gene-CJ235_12250;Name=CJ235_12250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_12250;pseudo=true PNGG01000015.1 Protein Homology CDS 112 267 . + 0 ID=cds-CJ235_12250;Parent=gene-CJ235_12250;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CJ235_12250;product=IS3 family transposase;pseudo=true;transl_table=11 PNGG01000015.1 Genbank gene 401 2566 . - . ID=gene-CJ235_12255;Name=CJ235_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12255 PNGG01000015.1 Protein Homology CDS 401 2566 . - 0 ID=cds-PMC16680.1;Parent=gene-CJ235_12255;Dbxref=NCBI_GP:PMC16680.1;Name=PMC16680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361297.1;locus_tag=CJ235_12255;product=RNA degradosome polyphosphate kinase;protein_id=PMC16680.1;transl_table=11 PNGG01000015.1 Genbank gene 2630 4162 . - . ID=gene-CJ235_12260;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CJ235_12260 PNGG01000015.1 Protein Homology CDS 2630 4162 . - 0 ID=cds-PMC16681.1;Parent=gene-CJ235_12260;Dbxref=NCBI_GP:PMC16681.1;Name=PMC16681.1;gbkey=CDS;gene=ppx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765588.1;locus_tag=CJ235_12260;product=exopolyphosphatase;protein_id=PMC16681.1;transl_table=11 PNGG01000015.1 Genbank gene 4526 4780 . + . ID=gene-CJ235_12265;Name=CJ235_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12265 PNGG01000015.1 Protein Homology CDS 4526 4780 . + 0 ID=cds-PMC16682.1;Parent=gene-CJ235_12265;Dbxref=NCBI_GP:PMC16682.1;Name=PMC16682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13936.4;locus_tag=CJ235_12265;product=hypothetical protein;protein_id=PMC16682.1;transl_table=11 ##sequence-region PNGG01000016.1 1 1580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000016.1 Genbank region 1 1580 . + . ID=PNGG01000016.1:1..1580;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000016.1 Genbank gene 755 829 . + . ID=gene-CJ235_12270;Name=CJ235_12270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12270 PNGG01000016.1 tRNAscan-SE tRNA 755 829 . + . ID=rna-CJ235_12270;Parent=gene-CJ235_12270;anticodon=(pos:788..790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12270;product=tRNA-Glu PNGG01000016.1 tRNAscan-SE exon 755 829 . + . ID=exon-CJ235_12270-1;Parent=rna-CJ235_12270;anticodon=(pos:788..790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12270;product=tRNA-Glu PNGG01000016.1 Genbank gene 837 909 . + . ID=gene-CJ235_12275;Name=CJ235_12275;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12275 PNGG01000016.1 tRNAscan-SE tRNA 837 909 . + . ID=rna-CJ235_12275;Parent=gene-CJ235_12275;anticodon=(pos:870..872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12275;product=tRNA-Asp PNGG01000016.1 tRNAscan-SE exon 837 909 . + . ID=exon-CJ235_12275-1;Parent=rna-CJ235_12275;anticodon=(pos:870..872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12275;product=tRNA-Asp PNGG01000016.1 Genbank gene 1206 1484 . + . ID=gene-CJ235_12280;Name=CJ235_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12280 PNGG01000016.1 GeneMarkS+ CDS 1206 1484 . + 0 ID=cds-PMC16615.1;Parent=gene-CJ235_12280;Dbxref=NCBI_GP:PMC16615.1;Name=PMC16615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_12280;product=hypothetical protein;protein_id=PMC16615.1;transl_table=11 ##sequence-region PNGG01000017.1 1 1095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000017.1 Genbank region 1 1095 . + . ID=PNGG01000017.1:1..1095;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000017.1 Genbank gene 1 132 . + . ID=gene-CJ235_12285;Name=CJ235_12285;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12285;partial=true;start_range=.,1 PNGG01000017.1 Genbank rRNA 1 132 . + . ID=rna-CJ235_12285;Parent=gene-CJ235_12285;gbkey=rRNA;locus_tag=CJ235_12285;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000017.1 Genbank exon 1 132 . + . ID=exon-CJ235_12285-1;Parent=rna-CJ235_12285;gbkey=rRNA;locus_tag=CJ235_12285;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000017.1 Genbank gene 784 1095 . + . ID=gene-CJ235_12290;Name=CJ235_12290;end_range=1095,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12290;partial=true PNGG01000017.1 Genbank rRNA 784 1095 . + . ID=rna-CJ235_12290;Parent=gene-CJ235_12290;end_range=1095,.;gbkey=rRNA;locus_tag=CJ235_12290;partial=true;product=23S ribosomal RNA PNGG01000017.1 Genbank exon 784 1095 . + . ID=exon-CJ235_12290-1;Parent=rna-CJ235_12290;end_range=1095,.;gbkey=rRNA;locus_tag=CJ235_12290;partial=true;product=23S ribosomal RNA ##sequence-region PNGG01000018.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000018.1 Genbank region 1 829 . + . ID=PNGG01000018.1:1..829;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000018.1 Genbank gene 1 132 . + . ID=gene-CJ235_12295;Name=CJ235_12295;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12295;partial=true;start_range=.,1 PNGG01000018.1 Genbank rRNA 1 132 . + . ID=rna-CJ235_12295;Parent=gene-CJ235_12295;gbkey=rRNA;locus_tag=CJ235_12295;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000018.1 Genbank exon 1 132 . + . ID=exon-CJ235_12295-1;Parent=rna-CJ235_12295;gbkey=rRNA;locus_tag=CJ235_12295;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000018.1 Genbank gene 518 829 . + . ID=gene-CJ235_12300;Name=CJ235_12300;end_range=829,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12300;partial=true PNGG01000018.1 Genbank rRNA 518 829 . + . ID=rna-CJ235_12300;Parent=gene-CJ235_12300;end_range=829,.;gbkey=rRNA;locus_tag=CJ235_12300;partial=true;product=23S ribosomal RNA PNGG01000018.1 Genbank exon 518 829 . + . ID=exon-CJ235_12300-1;Parent=rna-CJ235_12300;end_range=829,.;gbkey=rRNA;locus_tag=CJ235_12300;partial=true;product=23S ribosomal RNA ##sequence-region PNGG01000019.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000019.1 Genbank region 1 821 . + . ID=PNGG01000019.1:1..821;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000019.1 Genbank gene 1 132 . + . ID=gene-CJ235_12305;Name=CJ235_12305;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12305;partial=true;start_range=.,1 PNGG01000019.1 Genbank rRNA 1 132 . + . ID=rna-CJ235_12305;Parent=gene-CJ235_12305;gbkey=rRNA;locus_tag=CJ235_12305;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000019.1 Genbank exon 1 132 . + . ID=exon-CJ235_12305-1;Parent=rna-CJ235_12305;gbkey=rRNA;locus_tag=CJ235_12305;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000019.1 Genbank gene 394 470 . + . ID=gene-CJ235_12310;Name=CJ235_12310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12310 PNGG01000019.1 tRNAscan-SE tRNA 394 470 . + . ID=rna-CJ235_12310;Parent=gene-CJ235_12310;anticodon=(pos:428..430);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12310;product=tRNA-Ile PNGG01000019.1 tRNAscan-SE exon 394 470 . + . ID=exon-CJ235_12310-1;Parent=rna-CJ235_12310;anticodon=(pos:428..430);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12310;product=tRNA-Ile PNGG01000019.1 Genbank gene 698 821 . + . ID=gene-CJ235_12315;Name=CJ235_12315;end_range=821,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12315;partial=true PNGG01000019.1 Genbank rRNA 698 821 . + . ID=rna-CJ235_12315;Parent=gene-CJ235_12315;end_range=821,.;gbkey=rRNA;locus_tag=CJ235_12315;partial=true;product=23S ribosomal RNA PNGG01000019.1 Genbank exon 698 821 . + . ID=exon-CJ235_12315-1;Parent=rna-CJ235_12315;end_range=821,.;gbkey=rRNA;locus_tag=CJ235_12315;partial=true;product=23S ribosomal RNA ##sequence-region PNGG01000002.1 1 568529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000002.1 Genbank region 1 568529 . + . ID=PNGG01000002.1:1..568529;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000002.1 Genbank gene 422 1570 . - . ID=gene-CJ235_03760;Name=CJ235_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03760 PNGG01000002.1 Protein Homology CDS 422 1570 . - 0 ID=cds-PMC19491.1;Parent=gene-CJ235_03760;Dbxref=NCBI_GP:PMC19491.1;Name=PMC19491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472128.1;locus_tag=CJ235_03760;product=glycosyltransferase family 4 protein;protein_id=PMC19491.1;transl_table=11 PNGG01000002.1 Genbank gene 1931 3412 . + . ID=gene-CJ235_03765;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CJ235_03765 PNGG01000002.1 Protein Homology CDS 1931 3412 . + 0 ID=cds-PMC19492.1;Parent=gene-CJ235_03765;Dbxref=NCBI_GP:PMC19492.1;Name=PMC19492.1;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723229.1;locus_tag=CJ235_03765;product=malate dehydrogenase (quinone);protein_id=PMC19492.1;transl_table=11 PNGG01000002.1 Genbank gene 3995 5377 . - . ID=gene-CJ235_03770;Name=CJ235_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03770 PNGG01000002.1 Protein Homology CDS 3995 5377 . - 0 ID=cds-PMC19493.1;Parent=gene-CJ235_03770;Dbxref=NCBI_GP:PMC19493.1;Name=PMC19493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472129.1;locus_tag=CJ235_03770;product=two-component sensor histidine kinase;protein_id=PMC19493.1;transl_table=11 PNGG01000002.1 Genbank gene 5370 6047 . - . ID=gene-CJ235_03775;Name=CJ235_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03775 PNGG01000002.1 Protein Homology CDS 5370 6047 . - 0 ID=cds-PMC19494.1;Parent=gene-CJ235_03775;Dbxref=NCBI_GP:PMC19494.1;Name=PMC19494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723227.1;locus_tag=CJ235_03775;product=DNA-binding response regulator;protein_id=PMC19494.1;transl_table=11 PNGG01000002.1 Genbank gene 6410 7468 . + . ID=gene-CJ235_03780;Name=CJ235_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03780 PNGG01000002.1 Protein Homology CDS 6410 7468 . + 0 ID=cds-PMC19495.1;Parent=gene-CJ235_03780;Dbxref=NCBI_GP:PMC19495.1;Name=PMC19495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472131.1;locus_tag=CJ235_03780;product=ABC transporter permease;protein_id=PMC19495.1;transl_table=11 PNGG01000002.1 Genbank gene 7468 8136 . + . ID=gene-CJ235_03785;Name=CJ235_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03785 PNGG01000002.1 Protein Homology CDS 7468 8136 . + 0 ID=cds-PMC19496.1;Parent=gene-CJ235_03785;Dbxref=NCBI_GP:PMC19496.1;Name=PMC19496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472132.1;locus_tag=CJ235_03785;product=ABC transporter ATP-binding protein;protein_id=PMC19496.1;transl_table=11 PNGG01000002.1 Genbank gene 8402 9598 . - . ID=gene-CJ235_03790;Name=CJ235_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03790 PNGG01000002.1 Protein Homology CDS 8402 9598 . - 0 ID=cds-PMC19497.1;Parent=gene-CJ235_03790;Dbxref=NCBI_GP:PMC19497.1;Name=PMC19497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02371.14;locus_tag=CJ235_03790;product=hypothetical protein;protein_id=PMC19497.1;transl_table=11 PNGG01000002.1 Genbank gene 9736 9921 . - . ID=gene-CJ235_03795;Name=CJ235_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03795 PNGG01000002.1 GeneMarkS+ CDS 9736 9921 . - 0 ID=cds-PMC19498.1;Parent=gene-CJ235_03795;Dbxref=NCBI_GP:PMC19498.1;Name=PMC19498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03795;product=hypothetical protein;protein_id=PMC19498.1;transl_table=11 PNGG01000002.1 Genbank gene 10131 11120 . - . ID=gene-CJ235_03800;Name=CJ235_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03800 PNGG01000002.1 Protein Homology CDS 10131 11120 . - 0 ID=cds-PMC19499.1;Parent=gene-CJ235_03800;Dbxref=NCBI_GP:PMC19499.1;Name=PMC19499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471137.1;locus_tag=CJ235_03800;product=peptidylprolyl isomerase;protein_id=PMC19499.1;transl_table=11 PNGG01000002.1 Genbank gene 11356 11913 . - . ID=gene-CJ235_03805;Name=CJ235_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03805 PNGG01000002.1 Protein Homology CDS 11356 11913 . - 0 ID=cds-PMC19500.1;Parent=gene-CJ235_03805;Dbxref=NCBI_GP:PMC19500.1;Name=PMC19500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723164.1;locus_tag=CJ235_03805;product=DUF3267 domain-containing protein;protein_id=PMC19500.1;transl_table=11 PNGG01000002.1 Genbank gene 12173 12538 . - . ID=gene-CJ235_03810;Name=CJ235_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03810 PNGG01000002.1 Protein Homology CDS 12173 12538 . - 0 ID=cds-PMC19501.1;Parent=gene-CJ235_03810;Dbxref=NCBI_GP:PMC19501.1;Name=PMC19501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507253.1;locus_tag=CJ235_03810;product=YtxH domain-containing protein;protein_id=PMC19501.1;transl_table=11 PNGG01000002.1 Genbank gene 12618 13043 . - . ID=gene-CJ235_03815;Name=CJ235_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03815 PNGG01000002.1 Protein Homology CDS 12618 13043 . - 0 ID=cds-PMC19502.1;Parent=gene-CJ235_03815;Dbxref=NCBI_GP:PMC19502.1;Name=PMC19502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507254.1;locus_tag=CJ235_03815;product=HIT family protein;protein_id=PMC19502.1;transl_table=11 PNGG01000002.1 Genbank gene 13172 13909 . + . ID=gene-CJ235_03820;Name=CJ235_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03820 PNGG01000002.1 Protein Homology CDS 13172 13909 . + 0 ID=cds-PMC19503.1;Parent=gene-CJ235_03820;Dbxref=NCBI_GP:PMC19503.1;Name=PMC19503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472705.1;locus_tag=CJ235_03820;product=ABC transporter ATP-binding protein;protein_id=PMC19503.1;transl_table=11 PNGG01000002.1 Genbank gene 13906 15129 . + . ID=gene-CJ235_03825;Name=CJ235_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03825 PNGG01000002.1 Protein Homology CDS 13906 15129 . + 0 ID=cds-PMC19504.1;Parent=gene-CJ235_03825;Dbxref=NCBI_GP:PMC19504.1;Name=PMC19504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472701.1;locus_tag=CJ235_03825;product=multidrug ABC transporter ATP-binding protein;protein_id=PMC19504.1;transl_table=11 PNGG01000002.1 Genbank gene 15274 15774 . - . ID=gene-CJ235_03830;Name=CJ235_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03830 PNGG01000002.1 Protein Homology CDS 15274 15774 . - 0 ID=cds-PMC19505.1;Parent=gene-CJ235_03830;Dbxref=NCBI_GP:PMC19505.1;Name=PMC19505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507257.1;locus_tag=CJ235_03830;product=signal transduction protein TRAP;protein_id=PMC19505.1;transl_table=11 PNGG01000002.1 Genbank gene 16143 17177 . + . ID=gene-CJ235_03835;Name=CJ235_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03835 PNGG01000002.1 Protein Homology CDS 16143 17177 . + 0 ID=cds-PMC19506.1;Parent=gene-CJ235_03835;Dbxref=NCBI_GP:PMC19506.1;Name=PMC19506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723158.1;locus_tag=CJ235_03835;product=uroporphyrinogen decarboxylase;protein_id=PMC19506.1;transl_table=11 PNGG01000002.1 Genbank gene 17230 18153 . + . ID=gene-CJ235_03840;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CJ235_03840 PNGG01000002.1 Protein Homology CDS 17230 18153 . + 0 ID=cds-PMC19507.1;Parent=gene-CJ235_03840;Dbxref=NCBI_GP:PMC19507.1;Name=PMC19507.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482901.1;locus_tag=CJ235_03840;product=ferrochelatase;protein_id=PMC19507.1;transl_table=11 PNGG01000002.1 Genbank gene 18173 19576 . + . ID=gene-CJ235_03845;Name=CJ235_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03845 PNGG01000002.1 Protein Homology CDS 18173 19576 . + 0 ID=cds-PMC19508.1;Parent=gene-CJ235_03845;Dbxref=NCBI_GP:PMC19508.1;Name=PMC19508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466805.1;locus_tag=CJ235_03845;product=protoporphyrinogen oxidase;protein_id=PMC19508.1;transl_table=11 PNGG01000002.1 Genbank gene 19884 20441 . + . ID=gene-CJ235_03850;Name=CJ235_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03850 PNGG01000002.1 Protein Homology CDS 19884 20441 . + 0 ID=cds-PMC19509.1;Parent=gene-CJ235_03850;Dbxref=NCBI_GP:PMC19509.1;Name=PMC19509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472703.1;locus_tag=CJ235_03850;product=serine hydrolase family protein;protein_id=PMC19509.1;transl_table=11 PNGG01000002.1 Genbank gene 20877 20950 . + . ID=gene-CJ235_03855;Name=CJ235_03855;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03855 PNGG01000002.1 tRNAscan-SE tRNA 20877 20950 . + . ID=rna-CJ235_03855;Parent=gene-CJ235_03855;anticodon=(pos:20911..20913);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03855;product=tRNA-Met PNGG01000002.1 tRNAscan-SE exon 20877 20950 . + . ID=exon-CJ235_03855-1;Parent=rna-CJ235_03855;anticodon=(pos:20911..20913);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03855;product=tRNA-Met PNGG01000002.1 Genbank gene 20959 21034 . + . ID=gene-CJ235_03860;Name=CJ235_03860;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03860 PNGG01000002.1 tRNAscan-SE tRNA 20959 21034 . + . ID=rna-CJ235_03860;Parent=gene-CJ235_03860;anticodon=(pos:20992..20994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03860;product=tRNA-Asp PNGG01000002.1 tRNAscan-SE exon 20959 21034 . + . ID=exon-CJ235_03860-1;Parent=rna-CJ235_03860;anticodon=(pos:20992..20994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03860;product=tRNA-Asp PNGG01000002.1 Genbank gene 21039 21111 . + . ID=gene-CJ235_03865;Name=CJ235_03865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03865 PNGG01000002.1 tRNAscan-SE tRNA 21039 21111 . + . ID=rna-CJ235_03865;Parent=gene-CJ235_03865;anticodon=(pos:21072..21074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03865;product=tRNA-Phe PNGG01000002.1 tRNAscan-SE exon 21039 21111 . + . ID=exon-CJ235_03865-1;Parent=rna-CJ235_03865;anticodon=(pos:21072..21074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03865;product=tRNA-Phe PNGG01000002.1 Genbank gene 21128 21203 . + . ID=gene-CJ235_03870;Name=CJ235_03870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03870 PNGG01000002.1 tRNAscan-SE tRNA 21128 21203 . + . ID=rna-CJ235_03870;Parent=gene-CJ235_03870;anticodon=(pos:21161..21163);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03870;product=tRNA-His PNGG01000002.1 tRNAscan-SE exon 21128 21203 . + . ID=exon-CJ235_03870-1;Parent=rna-CJ235_03870;anticodon=(pos:21161..21163);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03870;product=tRNA-His PNGG01000002.1 Genbank gene 21221 21294 . + . ID=gene-CJ235_03875;Name=CJ235_03875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03875 PNGG01000002.1 tRNAscan-SE tRNA 21221 21294 . + . ID=rna-CJ235_03875;Parent=gene-CJ235_03875;anticodon=(pos:21253..21255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03875;product=tRNA-Gly PNGG01000002.1 tRNAscan-SE exon 21221 21294 . + . ID=exon-CJ235_03875-1;Parent=rna-CJ235_03875;anticodon=(pos:21253..21255);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03875;product=tRNA-Gly PNGG01000002.1 Genbank gene 21306 21380 . + . ID=gene-CJ235_03880;Name=CJ235_03880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03880 PNGG01000002.1 tRNAscan-SE tRNA 21306 21380 . + . ID=rna-CJ235_03880;Parent=gene-CJ235_03880;anticodon=(pos:21338..21340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03880;product=tRNA-Asn PNGG01000002.1 tRNAscan-SE exon 21306 21380 . + . ID=exon-CJ235_03880-1;Parent=rna-CJ235_03880;anticodon=(pos:21338..21340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03880;product=tRNA-Asn PNGG01000002.1 Genbank gene 21382 21453 . + . ID=gene-CJ235_03885;Name=CJ235_03885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03885 PNGG01000002.1 tRNAscan-SE tRNA 21382 21453 . + . ID=rna-CJ235_03885;Parent=gene-CJ235_03885;anticodon=(pos:21415..21417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03885;product=tRNA-Glu PNGG01000002.1 tRNAscan-SE exon 21382 21453 . + . ID=exon-CJ235_03885-1;Parent=rna-CJ235_03885;anticodon=(pos:21415..21417);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03885;product=tRNA-Glu PNGG01000002.1 Genbank gene 21500 21592 . + . ID=gene-CJ235_03890;Name=CJ235_03890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_03890 PNGG01000002.1 tRNAscan-SE tRNA 21500 21592 . + . ID=rna-CJ235_03890;Parent=gene-CJ235_03890;anticodon=(pos:21535..21537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03890;product=tRNA-Ser PNGG01000002.1 tRNAscan-SE exon 21500 21592 . + . ID=exon-CJ235_03890-1;Parent=rna-CJ235_03890;anticodon=(pos:21535..21537);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_03890;product=tRNA-Ser PNGG01000002.1 Genbank gene 22510 22950 . + . ID=gene-CJ235_03895;Name=CJ235_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03895 PNGG01000002.1 GeneMarkS+ CDS 22510 22950 . + 0 ID=cds-PMC19510.1;Parent=gene-CJ235_03895;Dbxref=NCBI_GP:PMC19510.1;Name=PMC19510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03895;product=hypothetical protein;protein_id=PMC19510.1;transl_table=11 PNGG01000002.1 Genbank gene 24616 24843 . - . ID=gene-CJ235_03900;Name=CJ235_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03900 PNGG01000002.1 GeneMarkS+ CDS 24616 24843 . - 0 ID=cds-PMC19511.1;Parent=gene-CJ235_03900;Dbxref=NCBI_GP:PMC19511.1;Name=PMC19511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_03900;product=hypothetical protein;protein_id=PMC19511.1;transl_table=11 PNGG01000002.1 Genbank gene 25278 25478 . - . ID=gene-CJ235_03905;Name=CJ235_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03905 PNGG01000002.1 Protein Homology CDS 25278 25478 . - 0 ID=cds-PMC19512.1;Parent=gene-CJ235_03905;Dbxref=NCBI_GP:PMC19512.1;Name=PMC19512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002838001.1;locus_tag=CJ235_03905;product=hypothetical protein;protein_id=PMC19512.1;transl_table=11 PNGG01000002.1 Genbank gene 26153 27259 . + . ID=gene-CJ235_03910;Name=CJ235_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03910 PNGG01000002.1 Protein Homology CDS 26153 27259 . + 0 ID=cds-PMC19513.1;Parent=gene-CJ235_03910;Dbxref=NCBI_GP:PMC19513.1;Name=PMC19513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471560.1;locus_tag=CJ235_03910;product=DNA-binding protein;protein_id=PMC19513.1;transl_table=11 PNGG01000002.1 Genbank gene 27358 28365 . - . ID=gene-CJ235_03915;Name=CJ235_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03915 PNGG01000002.1 Protein Homology CDS 27358 28365 . - 0 ID=cds-PMC19514.1;Parent=gene-CJ235_03915;Dbxref=NCBI_GP:PMC19514.1;Name=PMC19514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461128.1;locus_tag=CJ235_03915;product=DUF4352 domain-containing protein;protein_id=PMC19514.1;transl_table=11 PNGG01000002.1 Genbank gene 28680 29492 . - . ID=gene-CJ235_03920;Name=CJ235_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03920 PNGG01000002.1 Protein Homology CDS 28680 29492 . - 0 ID=cds-PMC19515.1;Parent=gene-CJ235_03920;Dbxref=NCBI_GP:PMC19515.1;Name=PMC19515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16729.3;locus_tag=CJ235_03920;product=DUF5067 domain-containing protein;protein_id=PMC19515.1;transl_table=11 PNGG01000002.1 Genbank gene 29712 31097 . + . ID=gene-CJ235_03925;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CJ235_03925 PNGG01000002.1 Protein Homology CDS 29712 31097 . + 0 ID=cds-PMC19516.1;Parent=gene-CJ235_03925;Dbxref=NCBI_GP:PMC19516.1;Name=PMC19516.1;gbkey=CDS;gene=menE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507267.1;locus_tag=CJ235_03925;product=o-succinylbenzoate--CoA ligase;protein_id=PMC19516.1;transl_table=11 PNGG01000002.1 Genbank gene 31142 32143 . + . ID=gene-CJ235_03930;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CJ235_03930 PNGG01000002.1 Protein Homology CDS 31142 32143 . + 0 ID=cds-PMC19517.1;Parent=gene-CJ235_03930;Dbxref=NCBI_GP:PMC19517.1;Name=PMC19517.1;gbkey=CDS;gene=menC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471562.1;locus_tag=CJ235_03930;product=o-succinylbenzoate synthase;protein_id=PMC19517.1;transl_table=11 PNGG01000002.1 Genbank gene 32140 32379 . - . ID=gene-CJ235_03935;Name=CJ235_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03935 PNGG01000002.1 Protein Homology CDS 32140 32379 . - 0 ID=cds-PMC19518.1;Parent=gene-CJ235_03935;Dbxref=NCBI_GP:PMC19518.1;Name=PMC19518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900638.1;locus_tag=CJ235_03935;product=membrane protein insertion efficiency factor YidD;protein_id=PMC19518.1;transl_table=11 PNGG01000002.1 Genbank gene 32448 32918 . + . ID=gene-CJ235_03940;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CJ235_03940 PNGG01000002.1 Protein Homology CDS 32448 32918 . + 0 ID=cds-PMC19519.1;Parent=gene-CJ235_03940;Dbxref=NCBI_GP:PMC19519.1;Name=PMC19519.1;gbkey=CDS;gene=ytkD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492645.1;locus_tag=CJ235_03940;product=nucleoside triphosphatase YtkD;protein_id=PMC19519.1;transl_table=11 PNGG01000002.1 Genbank gene 32902 33681 . + . ID=gene-CJ235_03945;Name=CJ235_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03945 PNGG01000002.1 Protein Homology CDS 32902 33681 . + 0 ID=cds-PMC19520.1;Parent=gene-CJ235_03945;Dbxref=NCBI_GP:PMC19520.1;Name=PMC19520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471553.1;locus_tag=CJ235_03945;product=S9 family peptidase;protein_id=PMC19520.1;transl_table=11 PNGG01000002.1 Genbank gene 33874 35463 . - . ID=gene-CJ235_03950;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CJ235_03950 PNGG01000002.1 Protein Homology CDS 33874 35463 . - 0 ID=cds-PMC19521.1;Parent=gene-CJ235_03950;Dbxref=NCBI_GP:PMC19521.1;Name=PMC19521.1;gbkey=CDS;gene=pckA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722208.1;locus_tag=CJ235_03950;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=PMC19521.1;transl_table=11 PNGG01000002.1 cmsearch riboswitch 35620 35732 . + . ID=id-PNGG01000002.1:35620..35732;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000002.1 Genbank gene 35841 37040 . + . ID=gene-CJ235_03955;Name=CJ235_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03955 PNGG01000002.1 Protein Homology CDS 35841 37040 . + 0 ID=cds-PMC19522.1;Parent=gene-CJ235_03955;Dbxref=NCBI_GP:PMC19522.1;Name=PMC19522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471550.1;locus_tag=CJ235_03955;product=methionine adenosyltransferase;protein_id=PMC19522.1;transl_table=11 PNGG01000002.1 Genbank gene 37124 38032 . + . ID=gene-CJ235_03960;Name=CJ235_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03960 PNGG01000002.1 Protein Homology CDS 37124 38032 . + 0 ID=cds-PMC19523.1;Parent=gene-CJ235_03960;Dbxref=NCBI_GP:PMC19523.1;Name=PMC19523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468065.1;locus_tag=CJ235_03960;product=hypothetical protein;protein_id=PMC19523.1;transl_table=11 PNGG01000002.1 Genbank gene 38252 39085 . + . ID=gene-CJ235_03965;Name=CJ235_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03965 PNGG01000002.1 Protein Homology CDS 38252 39085 . + 0 ID=cds-PMC19524.1;Parent=gene-CJ235_03965;Dbxref=NCBI_GP:PMC19524.1;Name=PMC19524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471563.1;locus_tag=CJ235_03965;product=aldo/keto reductase;protein_id=PMC19524.1;transl_table=11 PNGG01000002.1 Genbank gene 39191 39541 . - . ID=gene-CJ235_03970;Name=CJ235_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03970 PNGG01000002.1 Protein Homology CDS 39191 39541 . - 0 ID=cds-PMC19525.1;Parent=gene-CJ235_03970;Dbxref=NCBI_GP:PMC19525.1;Name=PMC19525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507276.1;locus_tag=CJ235_03970;product=CrcB family protein;protein_id=PMC19525.1;transl_table=11 PNGG01000002.1 Genbank gene 39538 39906 . - . ID=gene-CJ235_03975;Name=CJ235_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03975 PNGG01000002.1 Protein Homology CDS 39538 39906 . - 0 ID=cds-PMC19526.1;Parent=gene-CJ235_03975;Dbxref=NCBI_GP:PMC19526.1;Name=PMC19526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471551.1;locus_tag=CJ235_03975;product=fluoride efflux transporter CrcB;protein_id=PMC19526.1;transl_table=11 PNGG01000002.1 Genbank gene 39998 40303 . - . ID=gene-CJ235_03980;Name=CJ235_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03980 PNGG01000002.1 Protein Homology CDS 39998 40303 . - 0 ID=cds-PMC19527.1;Parent=gene-CJ235_03980;Dbxref=NCBI_GP:PMC19527.1;Name=PMC19527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302835.1;locus_tag=CJ235_03980;product=hypothetical protein;protein_id=PMC19527.1;transl_table=11 PNGG01000002.1 Genbank gene 40571 41284 . + . ID=gene-CJ235_03985;Name=CJ235_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03985 PNGG01000002.1 Protein Homology CDS 40571 41284 . + 0 ID=cds-PMC19528.1;Parent=gene-CJ235_03985;Dbxref=NCBI_GP:PMC19528.1;Name=PMC19528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CJ235_03985;product=transaldolase;protein_id=PMC19528.1;transl_table=11 PNGG01000002.1 Genbank gene 41501 41956 . + . ID=gene-CJ235_03990;Name=CJ235_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03990 PNGG01000002.1 Protein Homology CDS 41501 41956 . + 0 ID=cds-PMC19529.1;Parent=gene-CJ235_03990;Dbxref=NCBI_GP:PMC19529.1;Name=PMC19529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482915.1;locus_tag=CJ235_03990;product=hypothetical protein;protein_id=PMC19529.1;transl_table=11 PNGG01000002.1 Genbank gene 41951 42388 . - . ID=gene-CJ235_03995;Name=CJ235_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_03995 PNGG01000002.1 Protein Homology CDS 41951 42388 . - 0 ID=cds-PMC19530.1;Parent=gene-CJ235_03995;Dbxref=NCBI_GP:PMC19530.1;Name=PMC19530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06338.9;locus_tag=CJ235_03995;product=hypothetical protein;protein_id=PMC19530.1;transl_table=11 PNGG01000002.1 Genbank gene 42392 42952 . - . ID=gene-CJ235_04000;Name=CJ235_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04000 PNGG01000002.1 Protein Homology CDS 42392 42952 . - 0 ID=cds-PMC19531.1;Parent=gene-CJ235_04000;Dbxref=NCBI_GP:PMC19531.1;Name=PMC19531.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02937;locus_tag=CJ235_04000;product=sigma-70 family RNA polymerase sigma factor;protein_id=PMC19531.1;transl_table=11 PNGG01000002.1 Genbank gene 43080 43304 . + . ID=gene-CJ235_04005;Name=CJ235_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04005 PNGG01000002.1 Protein Homology CDS 43080 43304 . + 0 ID=cds-PMC19532.1;Parent=gene-CJ235_04005;Dbxref=NCBI_GP:PMC19532.1;Name=PMC19532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468074.1;locus_tag=CJ235_04005;product=hypothetical protein;protein_id=PMC19532.1;transl_table=11 PNGG01000002.1 Genbank gene 43494 44348 . + . ID=gene-CJ235_04010;Name=CJ235_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04010 PNGG01000002.1 Protein Homology CDS 43494 44348 . + 0 ID=cds-PMC19533.1;Parent=gene-CJ235_04010;Dbxref=NCBI_GP:PMC19533.1;Name=PMC19533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471570.1;locus_tag=CJ235_04010;product=autolysin;protein_id=PMC19533.1;transl_table=11 PNGG01000002.1 Genbank gene 44583 45506 . - . ID=gene-CJ235_04015;Name=CJ235_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04015 PNGG01000002.1 Protein Homology CDS 44583 45506 . - 0 ID=cds-PMC19534.1;Parent=gene-CJ235_04015;Dbxref=NCBI_GP:PMC19534.1;Name=PMC19534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471555.1;locus_tag=CJ235_04015;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=PMC19534.1;transl_table=11 PNGG01000002.1 Genbank gene 45657 47141 . + . ID=gene-CJ235_04020;Name=CJ235_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04020 PNGG01000002.1 Protein Homology CDS 45657 47141 . + 0 ID=cds-PMC19535.1;Parent=gene-CJ235_04020;Dbxref=NCBI_GP:PMC19535.1;Name=PMC19535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449656.1;locus_tag=CJ235_04020;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=PMC19535.1;transl_table=11 PNGG01000002.1 cmsearch riboswitch 47528 47662 . + . ID=id-PNGG01000002.1:47528..47662;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000002.1 Genbank gene 47925 48968 . + . ID=gene-CJ235_04025;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CJ235_04025 PNGG01000002.1 Protein Homology CDS 47925 48968 . + 0 ID=cds-PMC19536.1;Parent=gene-CJ235_04025;Dbxref=NCBI_GP:PMC19536.1;Name=PMC19536.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488430.1;locus_tag=CJ235_04025;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=PMC19536.1;transl_table=11 PNGG01000002.1 Genbank gene 48973 49605 . + . ID=gene-CJ235_04030;Name=CJ235_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04030 PNGG01000002.1 Protein Homology CDS 48973 49605 . + 0 ID=cds-PMC19537.1;Parent=gene-CJ235_04030;Dbxref=NCBI_GP:PMC19537.1;Name=PMC19537.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507290.1;locus_tag=CJ235_04030;product=riboflavin synthase subunit alpha;protein_id=PMC19537.1;transl_table=11 PNGG01000002.1 Genbank gene 49618 50799 . + . ID=gene-CJ235_04035;Name=CJ235_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04035 PNGG01000002.1 Protein Homology CDS 49618 50799 . + 0 ID=cds-PMC19538.1;Parent=gene-CJ235_04035;Dbxref=NCBI_GP:PMC19538.1;Name=PMC19538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500389.1;locus_tag=CJ235_04035;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=PMC19538.1;transl_table=11 PNGG01000002.1 Genbank gene 50812 51279 . + . ID=gene-CJ235_04040;Name=CJ235_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04040 PNGG01000002.1 Protein Homology CDS 50812 51279 . + 0 ID=cds-PMC19539.1;Parent=gene-CJ235_04040;Dbxref=NCBI_GP:PMC19539.1;Name=PMC19539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381993.1;locus_tag=CJ235_04040;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=PMC19539.1;transl_table=11 PNGG01000002.1 Genbank gene 51439 52440 . - . ID=gene-CJ235_04045;Name=CJ235_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04045 PNGG01000002.1 Protein Homology CDS 51439 52440 . - 0 ID=cds-PMC19540.1;Parent=gene-CJ235_04045;Dbxref=NCBI_GP:PMC19540.1;Name=PMC19540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507293.1;locus_tag=CJ235_04045;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=PMC19540.1;transl_table=11 PNGG01000002.1 Genbank gene 52771 53604 . + . ID=gene-CJ235_04050;Name=CJ235_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04050 PNGG01000002.1 Protein Homology CDS 52771 53604 . + 0 ID=cds-PMC19541.1;Parent=gene-CJ235_04050;Dbxref=NCBI_GP:PMC19541.1;Name=PMC19541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473005.1;locus_tag=CJ235_04050;product=alpha/beta hydrolase;protein_id=PMC19541.1;transl_table=11 PNGG01000002.1 Genbank gene 53926 54885 . + . ID=gene-CJ235_04055;Name=CJ235_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04055 PNGG01000002.1 Protein Homology CDS 53926 54885 . + 0 ID=cds-PMC19542.1;Parent=gene-CJ235_04055;Dbxref=NCBI_GP:PMC19542.1;Name=PMC19542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722186.1;locus_tag=CJ235_04055;product=L-lactate dehydrogenase;protein_id=PMC19542.1;transl_table=11 PNGG01000002.1 Genbank gene 55137 55541 . + . ID=gene-CJ235_04060;Name=CJ235_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04060 PNGG01000002.1 Protein Homology CDS 55137 55541 . + 0 ID=cds-PMC19543.1;Parent=gene-CJ235_04060;Dbxref=NCBI_GP:PMC19543.1;Name=PMC19543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482982.1;locus_tag=CJ235_04060;product=transcriptional regulator;protein_id=PMC19543.1;transl_table=11 PNGG01000002.1 Genbank gene 55662 56222 . - . ID=gene-CJ235_04065;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=CJ235_04065 PNGG01000002.1 Protein Homology CDS 55662 56222 . - 0 ID=cds-PMC19544.1;Parent=gene-CJ235_04065;Dbxref=NCBI_GP:PMC19544.1;Name=PMC19544.1;gbkey=CDS;gene=mraW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434676.1;locus_tag=CJ235_04065;product=methyltransferase domain-containing protein;protein_id=PMC19544.1;transl_table=11 PNGG01000002.1 Genbank gene 56219 57172 . - . ID=gene-CJ235_04070;Name=CJ235_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04070 PNGG01000002.1 Protein Homology CDS 56219 57172 . - 0 ID=cds-PMC19545.1;Parent=gene-CJ235_04070;Dbxref=NCBI_GP:PMC19545.1;Name=PMC19545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764988.1;locus_tag=CJ235_04070;product=TIGR01212 family radical SAM protein;protein_id=PMC19545.1;transl_table=11 PNGG01000002.1 Genbank gene 57428 58603 . + . ID=gene-CJ235_04075;Name=CJ235_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04075 PNGG01000002.1 Protein Homology CDS 57428 58603 . + 0 ID=cds-PMC19546.1;Parent=gene-CJ235_04075;Dbxref=NCBI_GP:PMC19546.1;Name=PMC19546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446712.1;locus_tag=CJ235_04075;product=MFS transporter;protein_id=PMC19546.1;transl_table=11 PNGG01000002.1 Genbank gene 58910 61327 . + . ID=gene-CJ235_04080;Name=CJ235_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04080 PNGG01000002.1 Protein Homology CDS 58910 61327 . + 0 ID=cds-PMC19547.1;Parent=gene-CJ235_04080;Dbxref=NCBI_GP:PMC19547.1;Name=PMC19547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467830.1;locus_tag=CJ235_04080;product=leucine--tRNA ligase;protein_id=PMC19547.1;transl_table=11 PNGG01000002.1 Genbank gene 61349 61660 . + . ID=gene-CJ235_04085;Name=CJ235_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04085 PNGG01000002.1 Protein Homology CDS 61349 61660 . + 0 ID=cds-PMC19548.1;Parent=gene-CJ235_04085;Dbxref=NCBI_GP:PMC19548.1;Name=PMC19548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764985.1;locus_tag=CJ235_04085;product=rhodanese-like domain-containing protein;protein_id=PMC19548.1;transl_table=11 PNGG01000002.1 Genbank gene 61862 63136 . - . ID=gene-CJ235_04090;Name=CJ235_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04090 PNGG01000002.1 Protein Homology CDS 61862 63136 . - 0 ID=cds-PMC19549.1;Parent=gene-CJ235_04090;Dbxref=NCBI_GP:PMC19549.1;Name=PMC19549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473003.1;locus_tag=CJ235_04090;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=PMC19549.1;transl_table=11 PNGG01000002.1 Genbank gene 63374 65011 . + . ID=gene-CJ235_04095;Name=CJ235_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04095 PNGG01000002.1 Protein Homology CDS 63374 65011 . + 0 ID=cds-PMC19550.1;Parent=gene-CJ235_04095;Dbxref=NCBI_GP:PMC19550.1;Name=PMC19550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302859.1;locus_tag=CJ235_04095;product=polysaccharide biosynthesis protein;protein_id=PMC19550.1;transl_table=11 PNGG01000002.1 Genbank gene 65008 65703 . + . ID=gene-CJ235_04100;Name=CJ235_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04100 PNGG01000002.1 Protein Homology CDS 65008 65703 . + 0 ID=cds-PMC19551.1;Parent=gene-CJ235_04100;Dbxref=NCBI_GP:PMC19551.1;Name=PMC19551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434686.1;locus_tag=CJ235_04100;product=rRNA pseudouridine synthase;protein_id=PMC19551.1;transl_table=11 PNGG01000002.1 Genbank gene 65726 66214 . + . ID=gene-CJ235_04105;Name=CJ235_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04105 PNGG01000002.1 Protein Homology CDS 65726 66214 . + 0 ID=cds-PMC19552.1;Parent=gene-CJ235_04105;Dbxref=NCBI_GP:PMC19552.1;Name=PMC19552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507305.1;locus_tag=CJ235_04105;product=YtxH domain-containing protein;protein_id=PMC19552.1;transl_table=11 PNGG01000002.1 Genbank gene 66523 67932 . + . ID=gene-CJ235_04110;Name=CJ235_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04110 PNGG01000002.1 Protein Homology CDS 66523 67932 . + 0 ID=cds-PMC19553.1;Parent=gene-CJ235_04110;Dbxref=NCBI_GP:PMC19553.1;Name=PMC19553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469670.1;locus_tag=CJ235_04110;product=dipeptidase PepV;protein_id=PMC19553.1;transl_table=11 PNGG01000002.1 Genbank gene 67935 68783 . + . ID=gene-CJ235_04115;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CJ235_04115 PNGG01000002.1 Protein Homology CDS 67935 68783 . + 0 ID=cds-PMC19554.1;Parent=gene-CJ235_04115;Dbxref=NCBI_GP:PMC19554.1;Name=PMC19554.1;gbkey=CDS;gene=dat;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452161.1;locus_tag=CJ235_04115;product=D-amino-acid transaminase;protein_id=PMC19554.1;transl_table=11 PNGG01000002.1 Genbank gene 69427 70218 . + . ID=gene-CJ235_04120;Name=CJ235_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04120 PNGG01000002.1 Protein Homology CDS 69427 70218 . + 0 ID=cds-PMC19555.1;Parent=gene-CJ235_04120;Dbxref=NCBI_GP:PMC19555.1;Name=PMC19555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510192.1;locus_tag=CJ235_04120;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=PMC19555.1;transl_table=11 PNGG01000002.1 Genbank gene 70231 70872 . + . ID=gene-CJ235_04125;Name=CJ235_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04125 PNGG01000002.1 Protein Homology CDS 70231 70872 . + 0 ID=cds-PMC19556.1;Parent=gene-CJ235_04125;Dbxref=NCBI_GP:PMC19556.1;Name=PMC19556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449690.1;locus_tag=CJ235_04125;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=PMC19556.1;transl_table=11 PNGG01000002.1 Genbank gene 71015 71854 . + . ID=gene-CJ235_04130;Name=CJ235_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04130 PNGG01000002.1 Protein Homology CDS 71015 71854 . + 0 ID=cds-PMC19557.1;Parent=gene-CJ235_04130;Dbxref=NCBI_GP:PMC19557.1;Name=PMC19557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471221.1;locus_tag=CJ235_04130;product=MBL fold metallo-hydrolase;protein_id=PMC19557.1;transl_table=11 PNGG01000002.1 Genbank gene 71942 73018 . + . ID=gene-CJ235_04135;Name=CJ235_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04135 PNGG01000002.1 Protein Homology CDS 71942 73018 . + 0 ID=cds-PMC19558.1;Parent=gene-CJ235_04135;Dbxref=NCBI_GP:PMC19558.1;Name=PMC19558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507312.1;locus_tag=CJ235_04135;product=M42 family peptidase;protein_id=PMC19558.1;transl_table=11 PNGG01000002.1 Genbank gene 73038 73358 . + . ID=gene-CJ235_04140;Name=CJ235_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04140 PNGG01000002.1 Protein Homology CDS 73038 73358 . + 0 ID=cds-PMC19559.1;Parent=gene-CJ235_04140;Dbxref=NCBI_GP:PMC19559.1;Name=PMC19559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471204.1;locus_tag=CJ235_04140;product=thioredoxin;protein_id=PMC19559.1;transl_table=11 PNGG01000002.1 Genbank gene 73478 74341 . + . ID=gene-CJ235_04145;Name=CJ235_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04145 PNGG01000002.1 Protein Homology CDS 73478 74341 . + 0 ID=cds-PMC19560.1;Parent=gene-CJ235_04145;Dbxref=NCBI_GP:PMC19560.1;Name=PMC19560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467702.1;locus_tag=CJ235_04145;product=DUF1444 domain-containing protein;protein_id=PMC19560.1;transl_table=11 PNGG01000002.1 Genbank gene 74354 74950 . + . ID=gene-CJ235_04150;Name=CJ235_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04150 PNGG01000002.1 Protein Homology CDS 74354 74950 . + 0 ID=cds-PMC19561.1;Parent=gene-CJ235_04150;Dbxref=NCBI_GP:PMC19561.1;Name=PMC19561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471222.1;locus_tag=CJ235_04150;product=phenylalanine--tRNA ligase subunit beta;protein_id=PMC19561.1;transl_table=11 PNGG01000002.1 Genbank gene 76868 78967 . + . ID=gene-CJ235_04155;Name=CJ235_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04155 PNGG01000002.1 Protein Homology CDS 76868 78967 . + 0 ID=cds-PMC19993.1;Parent=gene-CJ235_04155;Dbxref=NCBI_GP:PMC19993.1;Name=PMC19993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471224.1;locus_tag=CJ235_04155;product=DNA translocase FtsK;protein_id=PMC19993.1;transl_table=11 PNGG01000002.1 Genbank gene 78994 80307 . + . ID=gene-CJ235_04160;Name=CJ235_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04160 PNGG01000002.1 Protein Homology CDS 78994 80307 . + 0 ID=cds-PMC19562.1;Parent=gene-CJ235_04160;Dbxref=NCBI_GP:PMC19562.1;Name=PMC19562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275483.1;locus_tag=CJ235_04160;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=PMC19562.1;transl_table=11 PNGG01000002.1 Genbank gene 80388 80882 . + . ID=gene-CJ235_04165;Name=CJ235_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04165 PNGG01000002.1 Protein Homology CDS 80388 80882 . + 0 ID=cds-PMC19563.1;Parent=gene-CJ235_04165;Dbxref=NCBI_GP:PMC19563.1;Name=PMC19563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483004.1;locus_tag=CJ235_04165;product=DUF948 domain-containing protein;protein_id=PMC19563.1;transl_table=11 PNGG01000002.1 Genbank gene 80961 82553 . + . ID=gene-CJ235_04170;Name=CJ235_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04170 PNGG01000002.1 GeneMarkS+ CDS 80961 82553 . + 0 ID=cds-PMC19564.1;Parent=gene-CJ235_04170;Dbxref=NCBI_GP:PMC19564.1;Name=PMC19564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_04170;product=hypothetical protein;protein_id=PMC19564.1;transl_table=11 PNGG01000002.1 Genbank gene 82853 83941 . + . ID=gene-CJ235_04175;Name=CJ235_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04175 PNGG01000002.1 Protein Homology CDS 82853 83941 . + 0 ID=cds-PMC19565.1;Parent=gene-CJ235_04175;Dbxref=NCBI_GP:PMC19565.1;Name=PMC19565.1;Note=catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764965.1;locus_tag=CJ235_04175;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=PMC19565.1;transl_table=11 PNGG01000002.1 Genbank gene 84350 85339 . + . ID=gene-CJ235_04180;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CJ235_04180 PNGG01000002.1 Protein Homology CDS 84350 85339 . + 0 ID=cds-PMC19566.1;Parent=gene-CJ235_04180;Dbxref=NCBI_GP:PMC19566.1;Name=PMC19566.1;gbkey=CDS;gene=ccpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510205.1;locus_tag=CJ235_04180;product=catabolite control protein A;protein_id=PMC19566.1;transl_table=11 PNGG01000002.1 Genbank gene 85511 86662 . - . ID=gene-CJ235_04185;Name=CJ235_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04185 PNGG01000002.1 Protein Homology CDS 85511 86662 . - 0 ID=cds-PMC19567.1;Parent=gene-CJ235_04185;Dbxref=NCBI_GP:PMC19567.1;Name=PMC19567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510206.1;locus_tag=CJ235_04185;product=acetoin utilization protein AcuC;protein_id=PMC19567.1;transl_table=11 PNGG01000002.1 Genbank gene 86734 87366 . - . ID=gene-CJ235_04190;Name=CJ235_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04190 PNGG01000002.1 Protein Homology CDS 86734 87366 . - 0 ID=cds-PMC19568.1;Parent=gene-CJ235_04190;Dbxref=NCBI_GP:PMC19568.1;Name=PMC19568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722158.1;locus_tag=CJ235_04190;product=N-acetyltransferase;protein_id=PMC19568.1;transl_table=11 PNGG01000002.1 Genbank gene 87560 89269 . + . ID=gene-CJ235_04195;Name=CJ235_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04195 PNGG01000002.1 Protein Homology CDS 87560 89269 . + 0 ID=cds-PMC19569.1;Parent=gene-CJ235_04195;Dbxref=NCBI_GP:PMC19569.1;Name=PMC19569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510208.1;locus_tag=CJ235_04195;product=acetate--CoA ligase;protein_id=PMC19569.1;transl_table=11 PNGG01000002.1 Genbank gene 89754 91421 . + . ID=gene-CJ235_04200;Name=CJ235_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04200 PNGG01000002.1 Protein Homology CDS 89754 91421 . + 0 ID=cds-PMC19570.1;Parent=gene-CJ235_04200;Dbxref=NCBI_GP:PMC19570.1;Name=PMC19570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CJ235_04200;product=formate--tetrahydrofolate ligase;protein_id=PMC19570.1;transl_table=11 PNGG01000002.1 Genbank gene 91535 92443 . - . ID=gene-CJ235_04205;Name=CJ235_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04205 PNGG01000002.1 Protein Homology CDS 91535 92443 . - 0 ID=cds-PMC19571.1;Parent=gene-CJ235_04205;Dbxref=NCBI_GP:PMC19571.1;Name=PMC19571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471225.1;locus_tag=CJ235_04205;product=transglycosylase;protein_id=PMC19571.1;transl_table=11 PNGG01000002.1 Genbank gene 92846 94108 . + . ID=gene-CJ235_04210;Name=CJ235_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04210 PNGG01000002.1 Protein Homology CDS 92846 94108 . + 0 ID=cds-PMC19572.1;Parent=gene-CJ235_04210;Dbxref=NCBI_GP:PMC19572.1;Name=PMC19572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764961.1;locus_tag=CJ235_04210;product=tyrosine--tRNA ligase;protein_id=PMC19572.1;transl_table=11 PNGG01000002.1 Genbank gene 95278 96555 . - . ID=gene-CJ235_04215;Name=CJ235_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04215 PNGG01000002.1 Protein Homology CDS 95278 96555 . - 0 ID=cds-PMC19573.1;Parent=gene-CJ235_04215;Dbxref=NCBI_GP:PMC19573.1;Name=PMC19573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471216.1;locus_tag=CJ235_04215;product=serine endoprotease DegP;protein_id=PMC19573.1;transl_table=11 PNGG01000002.1 Genbank gene 96718 97335 . + . ID=gene-CJ235_04220;Name=CJ235_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04220 PNGG01000002.1 Protein Homology CDS 96718 97335 . + 0 ID=cds-PMC19574.1;Parent=gene-CJ235_04220;Dbxref=NCBI_GP:PMC19574.1;Name=PMC19574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510213.1;locus_tag=CJ235_04220;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=PMC19574.1;transl_table=11 PNGG01000002.1 Genbank gene 97569 99050 . + . ID=gene-CJ235_04225;Name=CJ235_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04225 PNGG01000002.1 Protein Homology CDS 97569 99050 . + 0 ID=cds-PMC19575.1;Parent=gene-CJ235_04225;Dbxref=NCBI_GP:PMC19575.1;Name=PMC19575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471199.1;locus_tag=CJ235_04225;product=PTS glucose transporter subunit IIBC;protein_id=PMC19575.1;transl_table=11 PNGG01000002.1 Genbank gene 99195 100316 . + . ID=gene-CJ235_04230;Name=CJ235_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04230 PNGG01000002.1 Protein Homology CDS 99195 100316 . + 0 ID=cds-PMC19576.1;Parent=gene-CJ235_04230;Dbxref=NCBI_GP:PMC19576.1;Name=PMC19576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507331.1;locus_tag=CJ235_04230;product=HAD family hydrolase;protein_id=PMC19576.1;transl_table=11 PNGG01000002.1 Genbank gene 100901 101353 . - . ID=gene-CJ235_04235;Name=CJ235_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04235 PNGG01000002.1 Protein Homology CDS 100901 101353 . - 0 ID=cds-PMC19577.1;Parent=gene-CJ235_04235;Dbxref=NCBI_GP:PMC19577.1;Name=PMC19577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471223.1;locus_tag=CJ235_04235;product=peroxiredoxin;protein_id=PMC19577.1;transl_table=11 PNGG01000002.1 Genbank gene 101429 102202 . + . ID=gene-CJ235_04240;Name=CJ235_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04240 PNGG01000002.1 Protein Homology CDS 101429 102202 . + 0 ID=cds-PMC19578.1;Parent=gene-CJ235_04240;Dbxref=NCBI_GP:PMC19578.1;Name=PMC19578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03009.15;locus_tag=CJ235_04240;product=glycerophosphodiester phosphodiesterase;protein_id=PMC19578.1;transl_table=11 PNGG01000002.1 Genbank gene 102292 102894 . - . ID=gene-CJ235_04245;Name=CJ235_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04245 PNGG01000002.1 Protein Homology CDS 102292 102894 . - 0 ID=cds-PMC19579.1;Parent=gene-CJ235_04245;Dbxref=NCBI_GP:PMC19579.1;Name=PMC19579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CJ235_04245;product=30S ribosomal protein S4;protein_id=PMC19579.1;transl_table=11 PNGG01000002.1 Genbank gene 103123 103587 . - . ID=gene-CJ235_04250;Name=CJ235_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04250 PNGG01000002.1 Protein Homology CDS 103123 103587 . - 0 ID=cds-PMC19580.1;Parent=gene-CJ235_04250;Dbxref=NCBI_GP:PMC19580.1;Name=PMC19580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471237.1;locus_tag=CJ235_04250;product=GAF domain-containing protein;protein_id=PMC19580.1;transl_table=11 PNGG01000002.1 Genbank gene 103858 105564 . + . ID=gene-CJ235_04255;Name=CJ235_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04255 PNGG01000002.1 Protein Homology CDS 103858 105564 . + 0 ID=cds-PMC19581.1;Parent=gene-CJ235_04255;Dbxref=NCBI_GP:PMC19581.1;Name=PMC19581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471186.1;locus_tag=CJ235_04255;product=septation ring formation regulator EzrA;protein_id=PMC19581.1;transl_table=11 PNGG01000002.1 Genbank gene 105856 106992 . + . ID=gene-CJ235_04260;Name=CJ235_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04260 PNGG01000002.1 Protein Homology CDS 105856 106992 . + 0 ID=cds-PMC19582.1;Parent=gene-CJ235_04260;Dbxref=NCBI_GP:PMC19582.1;Name=PMC19582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471201.1;locus_tag=CJ235_04260;product=cysteine desulfurase;protein_id=PMC19582.1;transl_table=11 PNGG01000002.1 Genbank gene 106989 108212 . + . ID=gene-CJ235_04265;Name=CJ235_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04265 PNGG01000002.1 Protein Homology CDS 106989 108212 . + 0 ID=cds-PMC19583.1;Parent=gene-CJ235_04265;Dbxref=NCBI_GP:PMC19583.1;Name=PMC19583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507341.1;locus_tag=CJ235_04265;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=PMC19583.1;transl_table=11 PNGG01000002.1 Genbank gene 108257 109030 . + . ID=gene-CJ235_04270;Name=CJ235_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04270 PNGG01000002.1 Protein Homology CDS 108257 109030 . + 0 ID=cds-PMC19584.1;Parent=gene-CJ235_04270;Dbxref=NCBI_GP:PMC19584.1;Name=PMC19584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275510.1;locus_tag=CJ235_04270;product=hypothetical protein;protein_id=PMC19584.1;transl_table=11 PNGG01000002.1 Genbank gene 109187 110182 . + . ID=gene-CJ235_04275;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CJ235_04275 PNGG01000002.1 Protein Homology CDS 109187 110182 . + 0 ID=cds-PMC19585.1;Parent=gene-CJ235_04275;Dbxref=NCBI_GP:PMC19585.1;Name=PMC19585.1;gbkey=CDS;gene=sppA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512494.1;locus_tag=CJ235_04275;product=signal peptide peptidase SppA;protein_id=PMC19585.1;transl_table=11 PNGG01000002.1 Genbank gene 110192 110746 . + . ID=gene-CJ235_04280;Name=CJ235_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04280 PNGG01000002.1 Protein Homology CDS 110192 110746 . + 0 ID=cds-PMC19586.1;Parent=gene-CJ235_04280;Dbxref=NCBI_GP:PMC19586.1;Name=PMC19586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471190.1;locus_tag=CJ235_04280;product=RDD family protein;protein_id=PMC19586.1;transl_table=11 PNGG01000002.1 Genbank gene 111407 112354 . + . ID=gene-CJ235_04285;Name=CJ235_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04285 PNGG01000002.1 Protein Homology CDS 111407 112354 . + 0 ID=cds-PMC19587.1;Parent=gene-CJ235_04285;Dbxref=NCBI_GP:PMC19587.1;Name=PMC19587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764943.1;locus_tag=CJ235_04285;product=class I SAM-dependent methyltransferase;protein_id=PMC19587.1;transl_table=11 PNGG01000002.1 Genbank gene 112436 113632 . + . ID=gene-CJ235_04290;Name=CJ235_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04290 PNGG01000002.1 Protein Homology CDS 112436 113632 . + 0 ID=cds-PMC19588.1;Parent=gene-CJ235_04290;Dbxref=NCBI_GP:PMC19588.1;Name=PMC19588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381930.1;locus_tag=CJ235_04290;product=acetate kinase;protein_id=PMC19588.1;transl_table=11 PNGG01000002.1 Genbank gene 113935 118464 . - . ID=gene-CJ235_04295;Name=CJ235_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04295 PNGG01000002.1 Protein Homology CDS 113935 118464 . - 0 ID=cds-PMC19589.1;Parent=gene-CJ235_04295;Dbxref=NCBI_GP:PMC19589.1;Name=PMC19589.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03272.11%2CHMM:TIGR01167;locus_tag=CJ235_04295;product=hypothetical protein;protein_id=PMC19589.1;transl_table=11 PNGG01000002.1 Genbank gene 118734 119237 . - . ID=gene-CJ235_04300;Name=CJ235_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04300 PNGG01000002.1 Protein Homology CDS 118734 119237 . - 0 ID=cds-PMC19590.1;Parent=gene-CJ235_04300;Dbxref=NCBI_GP:PMC19590.1;Name=PMC19590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302899.1;locus_tag=CJ235_04300;product=universal stress protein;protein_id=PMC19590.1;transl_table=11 PNGG01000002.1 Genbank gene 119382 120497 . + . ID=gene-CJ235_04305;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CJ235_04305 PNGG01000002.1 Protein Homology CDS 119382 120497 . + 0 ID=cds-PMC19591.1;Parent=gene-CJ235_04305;Dbxref=NCBI_GP:PMC19591.1;Name=PMC19591.1;gbkey=CDS;gene=ald;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302900.1;locus_tag=CJ235_04305;product=alanine dehydrogenase;protein_id=PMC19591.1;transl_table=11 PNGG01000002.1 Genbank gene 120551 121606 . - . ID=gene-CJ235_04310;Name=CJ235_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04310 PNGG01000002.1 Protein Homology CDS 120551 121606 . - 0 ID=cds-PMC19592.1;Parent=gene-CJ235_04310;Dbxref=NCBI_GP:PMC19592.1;Name=PMC19592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471214.1;locus_tag=CJ235_04310;product=peptidase M24 family protein;protein_id=PMC19592.1;transl_table=11 PNGG01000002.1 Genbank gene 121762 122451 . + . ID=gene-CJ235_04315;Name=CJ235_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04315 PNGG01000002.1 Protein Homology CDS 121762 122451 . + 0 ID=cds-PMC19593.1;Parent=gene-CJ235_04315;Dbxref=NCBI_GP:PMC19593.1;Name=PMC19593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613669.1;locus_tag=CJ235_04315;product=metal-dependent hydrolase;protein_id=PMC19593.1;transl_table=11 PNGG01000002.1 Genbank gene 122566 122979 . - . ID=gene-CJ235_04320;Name=CJ235_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04320 PNGG01000002.1 Protein Homology CDS 122566 122979 . - 0 ID=cds-PMC19594.1;Parent=gene-CJ235_04320;Dbxref=NCBI_GP:PMC19594.1;Name=PMC19594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500319.1;locus_tag=CJ235_04320;product=universal stress protein;protein_id=PMC19594.1;transl_table=11 PNGG01000002.1 Genbank gene 123196 124488 . + . ID=gene-CJ235_04325;Name=CJ235_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04325 PNGG01000002.1 Protein Homology CDS 123196 124488 . + 0 ID=cds-PMC19595.1;Parent=gene-CJ235_04325;Dbxref=NCBI_GP:PMC19595.1;Name=PMC19595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483041.1;locus_tag=CJ235_04325;product=CBS domain-containing protein;protein_id=PMC19595.1;transl_table=11 PNGG01000002.1 Genbank gene 124686 125621 . + . ID=gene-CJ235_04330;Name=CJ235_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04330 PNGG01000002.1 Protein Homology CDS 124686 125621 . + 0 ID=cds-PMC19596.1;Parent=gene-CJ235_04330;Dbxref=NCBI_GP:PMC19596.1;Name=PMC19596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507356.1;locus_tag=CJ235_04330;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=PMC19596.1;transl_table=11 PNGG01000002.1 Genbank gene 125636 128830 . + . ID=gene-CJ235_04335;Name=CJ235_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04335 PNGG01000002.1 Protein Homology CDS 125636 128830 . + 0 ID=cds-PMC19597.1;Parent=gene-CJ235_04335;Dbxref=NCBI_GP:PMC19597.1;Name=PMC19597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471236.1;locus_tag=CJ235_04335;product=DNA polymerase III subunit alpha;protein_id=PMC19597.1;transl_table=11 PNGG01000002.1 Genbank gene 129043 130278 . + . ID=gene-CJ235_04340;Name=CJ235_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04340 PNGG01000002.1 Protein Homology CDS 129043 130278 . + 0 ID=cds-PMC19598.1;Parent=gene-CJ235_04340;Dbxref=NCBI_GP:PMC19598.1;Name=PMC19598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471198.1;locus_tag=CJ235_04340;product=NAD-dependent malic enzyme;protein_id=PMC19598.1;transl_table=11 PNGG01000002.1 Genbank gene 130544 131410 . + . ID=gene-CJ235_04345;Name=CJ235_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04345 PNGG01000002.1 Protein Homology CDS 130544 131410 . + 0 ID=cds-PMC19599.1;Parent=gene-CJ235_04345;Dbxref=NCBI_GP:PMC19599.1;Name=PMC19599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302908.1;locus_tag=CJ235_04345;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=PMC19599.1;transl_table=11 PNGG01000002.1 Genbank gene 131403 132350 . + . ID=gene-CJ235_04350;Name=CJ235_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04350 PNGG01000002.1 Protein Homology CDS 131403 132350 . + 0 ID=cds-PMC19600.1;Parent=gene-CJ235_04350;Dbxref=NCBI_GP:PMC19600.1;Name=PMC19600.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471219.1;locus_tag=CJ235_04350;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=PMC19600.1;transl_table=11 PNGG01000002.1 Genbank gene 132674 133642 . + . ID=gene-CJ235_04355;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CJ235_04355 PNGG01000002.1 Protein Homology CDS 132674 133642 . + 0 ID=cds-PMC19601.1;Parent=gene-CJ235_04355;Dbxref=NCBI_GP:PMC19601.1;Name=PMC19601.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724721.1;locus_tag=CJ235_04355;product=6-phosphofructokinase;protein_id=PMC19601.1;transl_table=11 PNGG01000002.1 Genbank gene 133665 135425 . + . ID=gene-CJ235_04360;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CJ235_04360 PNGG01000002.1 Protein Homology CDS 133665 135425 . + 0 ID=cds-PMC19602.1;Parent=gene-CJ235_04360;Dbxref=NCBI_GP:PMC19602.1;Name=PMC19602.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764928.1;locus_tag=CJ235_04360;product=pyruvate kinase;protein_id=PMC19602.1;transl_table=11 PNGG01000002.1 Genbank gene 135665 137023 . - . ID=gene-CJ235_04365;Name=CJ235_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04365 PNGG01000002.1 Protein Homology CDS 135665 137023 . - 0 ID=cds-PMC19603.1;Parent=gene-CJ235_04365;Dbxref=NCBI_GP:PMC19603.1;Name=PMC19603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724719.1;locus_tag=CJ235_04365;product=amino acid permease;protein_id=PMC19603.1;transl_table=11 PNGG01000002.1 Genbank gene 137735 138856 . + . ID=gene-CJ235_04370;Name=CJ235_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04370 PNGG01000002.1 Protein Homology CDS 137735 138856 . + 0 ID=cds-PMC19604.1;Parent=gene-CJ235_04370;Dbxref=NCBI_GP:PMC19604.1;Name=PMC19604.1;Note=catalyzes the formation of citrate from acetyl-CoA and oxaloacetate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829163.1;locus_tag=CJ235_04370;product=citrate synthase;protein_id=PMC19604.1;transl_table=11 PNGG01000002.1 Genbank gene 138923 140191 . + . ID=gene-CJ235_04375;Name=CJ235_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04375 PNGG01000002.1 Protein Homology CDS 138923 140191 . + 0 ID=cds-PMC19605.1;Parent=gene-CJ235_04375;Dbxref=NCBI_GP:PMC19605.1;Name=PMC19605.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764925.1;locus_tag=CJ235_04375;product=NADP-dependent isocitrate dehydrogenase;protein_id=PMC19605.1;transl_table=11 PNGG01000002.1 Genbank gene 140426 141133 . + . ID=gene-CJ235_04380;Name=CJ235_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04380 PNGG01000002.1 Protein Homology CDS 140426 141133 . + 0 ID=cds-PMC19606.1;Parent=gene-CJ235_04380;Dbxref=NCBI_GP:PMC19606.1;Name=PMC19606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764924.1;locus_tag=CJ235_04380;product=two-component system response regulator CreB;protein_id=PMC19606.1;transl_table=11 PNGG01000002.1 Genbank gene 141133 142827 . + . ID=gene-CJ235_04385;Name=CJ235_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04385 PNGG01000002.1 Protein Homology CDS 141133 142827 . + 0 ID=cds-PMC19607.1;Parent=gene-CJ235_04385;Dbxref=NCBI_GP:PMC19607.1;Name=PMC19607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275532.1;locus_tag=CJ235_04385;product=PAS domain-containing sensor histidine kinase;protein_id=PMC19607.1;transl_table=11 PNGG01000002.1 Genbank gene 143205 145835 . + . ID=gene-CJ235_04390;Name=CJ235_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04390 PNGG01000002.1 Protein Homology CDS 143205 145835 . + 0 ID=cds-PMC19608.1;Parent=gene-CJ235_04390;Dbxref=NCBI_GP:PMC19608.1;Name=PMC19608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=CJ235_04390;product=DNA polymerase I;protein_id=PMC19608.1;transl_table=11 PNGG01000002.1 Genbank gene 145851 146723 . + . ID=gene-CJ235_04395;Name=CJ235_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04395 PNGG01000002.1 Protein Homology CDS 145851 146723 . + 0 ID=cds-PMC19609.1;Parent=gene-CJ235_04395;Dbxref=NCBI_GP:PMC19609.1;Name=PMC19609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470920.1;locus_tag=CJ235_04395;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=PMC19609.1;transl_table=11 PNGG01000002.1 Genbank gene 146739 147374 . + . ID=gene-CJ235_04400;Name=CJ235_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04400 PNGG01000002.1 Protein Homology CDS 146739 147374 . + 0 ID=cds-PMC19610.1;Parent=gene-CJ235_04400;Dbxref=NCBI_GP:PMC19610.1;Name=PMC19610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512482.1;locus_tag=CJ235_04400;product=dephospho-CoA kinase;protein_id=PMC19610.1;transl_table=11 PNGG01000002.1 Genbank gene 147788 148786 . + . ID=gene-CJ235_04405;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CJ235_04405 PNGG01000002.1 Protein Homology CDS 147788 148786 . + 0 ID=cds-PMC19611.1;Parent=gene-CJ235_04405;Dbxref=NCBI_GP:PMC19611.1;Name=PMC19611.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900539.1;locus_tag=CJ235_04405;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=PMC19611.1;transl_table=11 PNGG01000002.1 Genbank gene 149097 149570 . + . ID=gene-CJ235_04410;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CJ235_04410 PNGG01000002.1 Protein Homology CDS 149097 149570 . + 0 ID=cds-PMC19612.1;Parent=gene-CJ235_04410;Dbxref=NCBI_GP:PMC19612.1;Name=PMC19612.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900538.1;locus_tag=CJ235_04410;product=transcriptional repressor NrdR;protein_id=PMC19612.1;transl_table=11 PNGG01000002.1 Genbank gene 149567 150985 . + . ID=gene-CJ235_04415;Name=CJ235_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04415 PNGG01000002.1 Protein Homology CDS 149567 150985 . + 0 ID=cds-PMC19613.1;Parent=gene-CJ235_04415;Dbxref=NCBI_GP:PMC19613.1;Name=PMC19613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470934.1;locus_tag=CJ235_04415;product=helicase DnaB;protein_id=PMC19613.1;transl_table=11 PNGG01000002.1 Genbank gene 150982 151908 . + . ID=gene-CJ235_04420;Name=CJ235_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04420 PNGG01000002.1 Protein Homology CDS 150982 151908 . + 0 ID=cds-PMC19614.1;Parent=gene-CJ235_04420;Dbxref=NCBI_GP:PMC19614.1;Name=PMC19614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724708.1;locus_tag=CJ235_04420;product=primosomal protein DnaI;protein_id=PMC19614.1;transl_table=11 PNGG01000002.1 Genbank gene 152309 154246 . + . ID=gene-CJ235_04425;Name=CJ235_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04425 PNGG01000002.1 Protein Homology CDS 152309 154246 . + 0 ID=cds-PMC19615.1;Parent=gene-CJ235_04425;Dbxref=NCBI_GP:PMC19615.1;Name=PMC19615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898222.1;locus_tag=CJ235_04425;product=threonine--tRNA ligase;protein_id=PMC19615.1;transl_table=11 PNGG01000002.1 Genbank gene 154617 156110 . + . ID=gene-CJ235_04430;Name=CJ235_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04430 PNGG01000002.1 Protein Homology CDS 154617 156110 . + 0 ID=cds-PMC19616.1;Parent=gene-CJ235_04430;Dbxref=NCBI_GP:PMC19616.1;Name=PMC19616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764911.1;locus_tag=CJ235_04430;product=amino acid permease;protein_id=PMC19616.1;transl_table=11 PNGG01000002.1 Genbank gene 156317 156856 . + . ID=gene-CJ235_04435;Name=CJ235_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04435 PNGG01000002.1 Protein Homology CDS 156317 156856 . + 0 ID=cds-PMC19617.1;Parent=gene-CJ235_04435;Dbxref=NCBI_GP:PMC19617.1;Name=PMC19617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001807352.1;locus_tag=CJ235_04435;product=translation initiation factor IF-3;protein_id=PMC19617.1;transl_table=11 PNGG01000002.1 Genbank gene 156874 157074 . + . ID=gene-CJ235_04440;Name=CJ235_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04440 PNGG01000002.1 Protein Homology CDS 156874 157074 . + 0 ID=cds-PMC19618.1;Parent=gene-CJ235_04440;Dbxref=NCBI_GP:PMC19618.1;Name=PMC19618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CJ235_04440;product=50S ribosomal protein L35;protein_id=PMC19618.1;transl_table=11 PNGG01000002.1 Genbank gene 157121 157477 . + . ID=gene-CJ235_04445;Name=CJ235_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04445 PNGG01000002.1 Protein Homology CDS 157121 157477 . + 0 ID=cds-PMC19619.1;Parent=gene-CJ235_04445;Dbxref=NCBI_GP:PMC19619.1;Name=PMC19619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507379.1;locus_tag=CJ235_04445;product=50S ribosomal protein L20;protein_id=PMC19619.1;transl_table=11 PNGG01000002.1 Genbank gene 157691 158299 . + . ID=gene-CJ235_04450;Name=CJ235_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04450 PNGG01000002.1 Protein Homology CDS 157691 158299 . + 0 ID=cds-PMC19620.1;Parent=gene-CJ235_04450;Dbxref=NCBI_GP:PMC19620.1;Name=PMC19620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500287.1;locus_tag=CJ235_04450;product=NUDIX domain-containing protein;protein_id=PMC19620.1;transl_table=11 PNGG01000002.1 Genbank gene 158315 159238 . + . ID=gene-CJ235_04455;Name=CJ235_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04455 PNGG01000002.1 Protein Homology CDS 158315 159238 . + 0 ID=cds-PMC19621.1;Parent=gene-CJ235_04455;Dbxref=NCBI_GP:PMC19621.1;Name=PMC19621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470927.1;locus_tag=CJ235_04455;product=hypothetical protein;protein_id=PMC19621.1;transl_table=11 PNGG01000002.1 Genbank gene 159353 160675 . + . ID=gene-CJ235_04460;Name=CJ235_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04460 PNGG01000002.1 Protein Homology CDS 159353 160675 . + 0 ID=cds-PMC19622.1;Parent=gene-CJ235_04460;Dbxref=NCBI_GP:PMC19622.1;Name=PMC19622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176144.1;locus_tag=CJ235_04460;product=trigger factor;protein_id=PMC19622.1;transl_table=11 PNGG01000002.1 Genbank gene 160918 162180 . + . ID=gene-CJ235_04465;Name=CJ235_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04465 PNGG01000002.1 Protein Homology CDS 160918 162180 . + 0 ID=cds-PMC19623.1;Parent=gene-CJ235_04465;Dbxref=NCBI_GP:PMC19623.1;Name=PMC19623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CJ235_04465;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=PMC19623.1;transl_table=11 PNGG01000002.1 Genbank gene 162441 163028 . + . ID=gene-CJ235_04470;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;gene_synonym=yihA,ysxC;locus_tag=CJ235_04470 PNGG01000002.1 Protein Homology CDS 162441 163028 . + 0 ID=cds-PMC19624.1;Parent=gene-CJ235_04470;Dbxref=NCBI_GP:PMC19624.1;Name=PMC19624.1;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381869.1;locus_tag=CJ235_04470;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=PMC19624.1;transl_table=11 PNGG01000002.1 Genbank gene 163338 164681 . + . ID=gene-CJ235_04475;Name=CJ235_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04475 PNGG01000002.1 Protein Homology CDS 163338 164681 . + 0 ID=cds-PMC19625.1;Parent=gene-CJ235_04475;Dbxref=NCBI_GP:PMC19625.1;Name=PMC19625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764902.1;locus_tag=CJ235_04475;product=glutamyl-tRNA reductase;protein_id=PMC19625.1;transl_table=11 PNGG01000002.1 Genbank gene 164705 165541 . + . ID=gene-CJ235_04480;Name=CJ235_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04480 PNGG01000002.1 Protein Homology CDS 164705 165541 . + 0 ID=cds-PMC19626.1;Parent=gene-CJ235_04480;Dbxref=NCBI_GP:PMC19626.1;Name=PMC19626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507386.1;locus_tag=CJ235_04480;product=cytochrome C assembly protein;protein_id=PMC19626.1;transl_table=11 PNGG01000002.1 Genbank gene 165573 166499 . + . ID=gene-CJ235_04485;Name=CJ235_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04485 PNGG01000002.1 Protein Homology CDS 165573 166499 . + 0 ID=cds-PMC19627.1;Parent=gene-CJ235_04485;Dbxref=NCBI_GP:PMC19627.1;Name=PMC19627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471527.1;locus_tag=CJ235_04485;product=hydroxymethylbilane synthase;protein_id=PMC19627.1;transl_table=11 PNGG01000002.1 Genbank gene 166513 167196 . + . ID=gene-CJ235_04490;Name=CJ235_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04490 PNGG01000002.1 Protein Homology CDS 166513 167196 . + 0 ID=cds-PMC19628.1;Parent=gene-CJ235_04490;Dbxref=NCBI_GP:PMC19628.1;Name=PMC19628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471532.1;locus_tag=CJ235_04490;product=uroporphyrinogen-III synthase;protein_id=PMC19628.1;transl_table=11 PNGG01000002.1 Genbank gene 167200 168177 . + . ID=gene-CJ235_04495;Name=CJ235_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04495 PNGG01000002.1 Protein Homology CDS 167200 168177 . + 0 ID=cds-PMC19629.1;Parent=gene-CJ235_04495;Dbxref=NCBI_GP:PMC19629.1;Name=PMC19629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468488.1;locus_tag=CJ235_04495;product=porphobilinogen synthase;protein_id=PMC19629.1;transl_table=11 PNGG01000002.1 Genbank gene 168190 169479 . + . ID=gene-CJ235_04500;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CJ235_04500 PNGG01000002.1 Protein Homology CDS 168190 169479 . + 0 ID=cds-PMC19630.1;Parent=gene-CJ235_04500;Dbxref=NCBI_GP:PMC19630.1;Name=PMC19630.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471529.1;locus_tag=CJ235_04500;product=glutamate-1-semialdehyde-2%2C1-aminomutase;protein_id=PMC19630.1;transl_table=11 PNGG01000002.1 Genbank gene 169744 170808 . + . ID=gene-CJ235_04505;Name=CJ235_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04505 PNGG01000002.1 Protein Homology CDS 169744 170808 . + 0 ID=cds-PMC19631.1;Parent=gene-CJ235_04505;Dbxref=NCBI_GP:PMC19631.1;Name=PMC19631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471538.1;locus_tag=CJ235_04505;product=aminopeptidase;protein_id=PMC19631.1;transl_table=11 PNGG01000002.1 Genbank gene 171014 171598 . - . ID=gene-CJ235_04510;Name=CJ235_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04510 PNGG01000002.1 Protein Homology CDS 171014 171598 . - 0 ID=cds-PMC19632.1;Parent=gene-CJ235_04510;Dbxref=NCBI_GP:PMC19632.1;Name=PMC19632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471522.1;locus_tag=CJ235_04510;product=DNA-3-methyladenine glycosylase I;protein_id=PMC19632.1;transl_table=11 PNGG01000002.1 Genbank gene 171943 174573 . + . ID=gene-CJ235_04515;Name=CJ235_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04515 PNGG01000002.1 Protein Homology CDS 171943 174573 . + 0 ID=cds-PMC19633.1;Parent=gene-CJ235_04515;Dbxref=NCBI_GP:PMC19633.1;Name=PMC19633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764894.1;locus_tag=CJ235_04515;product=valine--tRNA ligase;protein_id=PMC19633.1;transl_table=11 PNGG01000002.1 Genbank gene 174585 175853 . + . ID=gene-CJ235_04520;Name=CJ235_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04520 PNGG01000002.1 Protein Homology CDS 174585 175853 . + 0 ID=cds-PMC19634.1;Parent=gene-CJ235_04520;Dbxref=NCBI_GP:PMC19634.1;Name=PMC19634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471530.1;locus_tag=CJ235_04520;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=PMC19634.1;transl_table=11 PNGG01000002.1 Genbank gene 176070 176771 . + . ID=gene-CJ235_04525;Name=CJ235_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04525 PNGG01000002.1 Protein Homology CDS 176070 176771 . + 0 ID=cds-PMC19635.1;Parent=gene-CJ235_04525;Dbxref=NCBI_GP:PMC19635.1;Name=PMC19635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06750.11;locus_tag=CJ235_04525;product=hypothetical protein;protein_id=PMC19635.1;transl_table=11 PNGG01000002.1 Genbank gene 176768 177448 . + . ID=gene-CJ235_04530;Name=CJ235_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04530 PNGG01000002.1 Protein Homology CDS 176768 177448 . + 0 ID=cds-PMC19636.1;Parent=gene-CJ235_04530;Dbxref=NCBI_GP:PMC19636.1;Name=PMC19636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471525.1;locus_tag=CJ235_04530;product=JAB domain-containing protein;protein_id=PMC19636.1;transl_table=11 PNGG01000002.1 Genbank gene 177897 178355 . + . ID=gene-CJ235_04535;Name=CJ235_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04535 PNGG01000002.1 Protein Homology CDS 177897 178355 . + 0 ID=cds-PMC19637.1;Parent=gene-CJ235_04535;Dbxref=NCBI_GP:PMC19637.1;Name=PMC19637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507403.1;locus_tag=CJ235_04535;product=DUF4930 domain-containing protein;protein_id=PMC19637.1;transl_table=11 PNGG01000002.1 Genbank gene 178791 179639 . + . ID=gene-CJ235_04540;Name=CJ235_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04540 PNGG01000002.1 Protein Homology CDS 178791 179639 . + 0 ID=cds-PMC19638.1;Parent=gene-CJ235_04540;Dbxref=NCBI_GP:PMC19638.1;Name=PMC19638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443274.1;locus_tag=CJ235_04540;product=rod shape-determining protein MreC;protein_id=PMC19638.1;transl_table=11 PNGG01000002.1 Genbank gene 179639 180163 . + . ID=gene-CJ235_04545;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CJ235_04545 PNGG01000002.1 Protein Homology CDS 179639 180163 . + 0 ID=cds-PMC19639.1;Parent=gene-CJ235_04545;Dbxref=NCBI_GP:PMC19639.1;Name=PMC19639.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471521.1;locus_tag=CJ235_04545;product=rod shape-determining protein MreD;protein_id=PMC19639.1;transl_table=11 PNGG01000002.1 Genbank gene 180279 180587 . + . ID=gene-CJ235_04550;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CJ235_04550 PNGG01000002.1 Protein Homology CDS 180279 180587 . + 0 ID=cds-PMC19640.1;Parent=gene-CJ235_04550;Dbxref=NCBI_GP:PMC19640.1;Name=PMC19640.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CJ235_04550;product=50S ribosomal protein L21;protein_id=PMC19640.1;transl_table=11 PNGG01000002.1 Genbank gene 180590 180910 . + . ID=gene-CJ235_04555;Name=CJ235_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04555 PNGG01000002.1 Protein Homology CDS 180590 180910 . + 0 ID=cds-PMC19641.1;Parent=gene-CJ235_04555;Dbxref=NCBI_GP:PMC19641.1;Name=PMC19641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CJ235_04555;product=ribosomal-processing cysteine protease Prp;protein_id=PMC19641.1;transl_table=11 PNGG01000002.1 Genbank gene 180923 181207 . + . ID=gene-CJ235_04560;Name=CJ235_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04560 PNGG01000002.1 Protein Homology CDS 180923 181207 . + 0 ID=cds-PMC19642.1;Parent=gene-CJ235_04560;Dbxref=NCBI_GP:PMC19642.1;Name=PMC19642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CJ235_04560;product=50S ribosomal protein L27;protein_id=PMC19642.1;transl_table=11 PNGG01000002.1 Genbank gene 181329 182630 . + . ID=gene-CJ235_04565;Name=CJ235_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04565 PNGG01000002.1 Protein Homology CDS 181329 182630 . + 0 ID=cds-PMC19643.1;Parent=gene-CJ235_04565;Dbxref=NCBI_GP:PMC19643.1;Name=PMC19643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CJ235_04565;product=GTPase ObgE;protein_id=PMC19643.1;transl_table=11 PNGG01000002.1 Genbank gene 182642 183097 . + . ID=gene-CJ235_04570;Name=CJ235_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04570 PNGG01000002.1 Protein Homology CDS 182642 183097 . + 0 ID=cds-PMC19644.1;Parent=gene-CJ235_04570;Dbxref=NCBI_GP:PMC19644.1;Name=PMC19644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302947.1;locus_tag=CJ235_04570;product=ACT domain-containing protein;protein_id=PMC19644.1;transl_table=11 PNGG01000002.1 Genbank gene 183112 183717 . + . ID=gene-CJ235_04575;Name=CJ235_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04575 PNGG01000002.1 Protein Homology CDS 183112 183717 . + 0 ID=cds-PMC19645.1;Parent=gene-CJ235_04575;Dbxref=NCBI_GP:PMC19645.1;Name=PMC19645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764880.1;locus_tag=CJ235_04575;product=Holliday junction branch migration protein RuvA;protein_id=PMC19645.1;transl_table=11 PNGG01000002.1 Genbank gene 183752 184765 . + . ID=gene-CJ235_04580;Name=CJ235_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04580 PNGG01000002.1 Protein Homology CDS 183752 184765 . + 0 ID=cds-PMC19646.1;Parent=gene-CJ235_04580;Dbxref=NCBI_GP:PMC19646.1;Name=PMC19646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473117.1;locus_tag=CJ235_04580;product=Holliday junction branch migration DNA helicase RuvB;protein_id=PMC19646.1;transl_table=11 PNGG01000002.1 Genbank gene 184755 185780 . + . ID=gene-CJ235_04585;Name=CJ235_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04585 PNGG01000002.1 Protein Homology CDS 184755 185780 . + 0 ID=cds-PMC19647.1;Parent=gene-CJ235_04585;Dbxref=NCBI_GP:PMC19647.1;Name=PMC19647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CJ235_04585;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=PMC19647.1;transl_table=11 PNGG01000002.1 Genbank gene 185796 186935 . + . ID=gene-CJ235_04590;Name=CJ235_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04590 PNGG01000002.1 Protein Homology CDS 185796 186935 . + 0 ID=cds-PMC19648.1;Parent=gene-CJ235_04590;Dbxref=NCBI_GP:PMC19648.1;Name=PMC19648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CJ235_04590;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=PMC19648.1;transl_table=11 PNGG01000002.1 Genbank gene 186959 187219 . + . ID=gene-CJ235_04595;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CJ235_04595 PNGG01000002.1 Protein Homology CDS 186959 187219 . + 0 ID=cds-PMC19649.1;Parent=gene-CJ235_04595;Dbxref=NCBI_GP:PMC19649.1;Name=PMC19649.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443260.1;locus_tag=CJ235_04595;product=preprotein translocase subunit YajC;protein_id=PMC19649.1;transl_table=11 PNGG01000002.1 Genbank gene 187257 187508 . + . ID=gene-CJ235_04600;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CJ235_04600 PNGG01000002.1 Protein Homology CDS 187257 187508 . + 0 ID=cds-PMC19650.1;Parent=gene-CJ235_04600;Dbxref=NCBI_GP:PMC19650.1;Name=PMC19650.1;gbkey=CDS;gene=yajC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473113.1;locus_tag=CJ235_04600;product=preprotein translocase subunit YajC;protein_id=PMC19650.1;transl_table=11 PNGG01000002.1 Genbank gene 187816 190101 . + . ID=gene-CJ235_04605;Name=CJ235_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04605 PNGG01000002.1 Protein Homology CDS 187816 190101 . + 0 ID=cds-PMC19651.1;Parent=gene-CJ235_04605;Dbxref=NCBI_GP:PMC19651.1;Name=PMC19651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764875.1;locus_tag=CJ235_04605;product=protein translocase subunit SecDF;protein_id=PMC19651.1;transl_table=11 PNGG01000002.1 Genbank gene 190471 192747 . + . ID=gene-CJ235_04610;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CJ235_04610 PNGG01000002.1 Protein Homology CDS 190471 192747 . + 0 ID=cds-PMC19652.1;Parent=gene-CJ235_04610;Dbxref=NCBI_GP:PMC19652.1;Name=PMC19652.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473124.1;locus_tag=CJ235_04610;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=PMC19652.1;transl_table=11 PNGG01000002.1 Genbank gene 192760 193278 . + . ID=gene-CJ235_04615;Name=CJ235_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04615 PNGG01000002.1 Protein Homology CDS 192760 193278 . + 0 ID=cds-PMC19653.1;Parent=gene-CJ235_04615;Dbxref=NCBI_GP:PMC19653.1;Name=PMC19653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CJ235_04615;product=adenine phosphoribosyltransferase;protein_id=PMC19653.1;transl_table=11 PNGG01000002.1 Genbank gene 193606 195795 . + . ID=gene-CJ235_04620;Name=CJ235_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04620 PNGG01000002.1 Protein Homology CDS 193606 195795 . + 0 ID=cds-PMC19654.1;Parent=gene-CJ235_04620;Dbxref=NCBI_GP:PMC19654.1;Name=PMC19654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058579.1;locus_tag=CJ235_04620;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=PMC19654.1;transl_table=11 PNGG01000002.1 Genbank gene 195811 196263 . + . ID=gene-CJ235_04625;Name=CJ235_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04625 PNGG01000002.1 Protein Homology CDS 195811 196263 . + 0 ID=cds-PMC19655.1;Parent=gene-CJ235_04625;Dbxref=NCBI_GP:PMC19655.1;Name=PMC19655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478084.1;locus_tag=CJ235_04625;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=PMC19655.1;transl_table=11 PNGG01000002.1 Genbank gene 196260 197135 . + . ID=gene-CJ235_04630;Name=CJ235_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04630 PNGG01000002.1 Protein Homology CDS 196260 197135 . + 0 ID=cds-PMC19656.1;Parent=gene-CJ235_04630;Dbxref=NCBI_GP:PMC19656.1;Name=PMC19656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473111.1;locus_tag=CJ235_04630;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=PMC19656.1;transl_table=11 PNGG01000002.1 Genbank gene 197505 198767 . + . ID=gene-CJ235_04635;Name=CJ235_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04635 PNGG01000002.1 Protein Homology CDS 197505 198767 . + 0 ID=cds-PMC19657.1;Parent=gene-CJ235_04635;Dbxref=NCBI_GP:PMC19657.1;Name=PMC19657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835425.1;locus_tag=CJ235_04635;product=histidine--tRNA ligase;protein_id=PMC19657.1;transl_table=11 PNGG01000002.1 Genbank gene 198780 200546 . + . ID=gene-CJ235_04640;Name=CJ235_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04640 PNGG01000002.1 Protein Homology CDS 198780 200546 . + 0 ID=cds-PMC19658.1;Parent=gene-CJ235_04640;Dbxref=NCBI_GP:PMC19658.1;Name=PMC19658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510453.1;locus_tag=CJ235_04640;product=aspartate--tRNA ligase;protein_id=PMC19658.1;transl_table=11 PNGG01000002.1 Genbank gene 200631 200821 . + . ID=gene-CJ235_04645;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CJ235_04645 PNGG01000002.1 cmsearch ncRNA 200631 200821 . + . ID=rna-CJ235_04645;Parent=gene-CJ235_04645;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_04645;product=6S RNA PNGG01000002.1 cmsearch exon 200631 200821 . + . ID=exon-CJ235_04645-1;Parent=rna-CJ235_04645;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_04645;product=6S RNA PNGG01000002.1 Genbank gene 200899 201672 . + . ID=gene-CJ235_04650;Name=CJ235_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04650 PNGG01000002.1 Protein Homology CDS 200899 201672 . + 0 ID=cds-PMC19659.1;Parent=gene-CJ235_04650;Dbxref=NCBI_GP:PMC19659.1;Name=PMC19659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500243.1;locus_tag=CJ235_04650;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=PMC19659.1;transl_table=11 PNGG01000002.1 Genbank gene 201809 202744 . - . ID=gene-CJ235_04655;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CJ235_04655 PNGG01000002.1 Protein Homology CDS 201809 202744 . - 0 ID=cds-PMC19660.1;Parent=gene-CJ235_04655;Dbxref=NCBI_GP:PMC19660.1;Name=PMC19660.1;gbkey=CDS;gene=mdh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473123.1;locus_tag=CJ235_04655;product=malate dehydrogenase;protein_id=PMC19660.1;transl_table=11 PNGG01000002.1 Genbank gene 202995 204284 . - . ID=gene-CJ235_04660;Name=CJ235_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04660 PNGG01000002.1 Protein Homology CDS 202995 204284 . - 0 ID=cds-PMC19661.1;Parent=gene-CJ235_04660;Dbxref=NCBI_GP:PMC19661.1;Name=PMC19661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764864.1;locus_tag=CJ235_04660;product=recombinase RarA;protein_id=PMC19661.1;transl_table=11 PNGG01000002.1 Genbank gene 204500 204919 . + . ID=gene-CJ235_04665;Name=CJ235_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04665 PNGG01000002.1 Protein Homology CDS 204500 204919 . + 0 ID=cds-PMC19662.1;Parent=gene-CJ235_04665;Dbxref=NCBI_GP:PMC19662.1;Name=PMC19662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CJ235_04665;product=Rrf2 family transcriptional regulator;protein_id=PMC19662.1;transl_table=11 PNGG01000002.1 Genbank gene 205072 205254 . + . ID=gene-CJ235_04670;Name=CJ235_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04670 PNGG01000002.1 Protein Homology CDS 205072 205254 . + 0 ID=cds-PMC19663.1;Parent=gene-CJ235_04670;Dbxref=NCBI_GP:PMC19663.1;Name=PMC19663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724656.1;locus_tag=CJ235_04670;product=CsbD family protein;protein_id=PMC19663.1;transl_table=11 PNGG01000002.1 Genbank gene 205599 206606 . - . ID=gene-CJ235_04675;Name=CJ235_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04675 PNGG01000002.1 Protein Homology CDS 205599 206606 . - 0 ID=cds-PMC19664.1;Parent=gene-CJ235_04675;Dbxref=NCBI_GP:PMC19664.1;Name=PMC19664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471008.1;locus_tag=CJ235_04675;product=LLM class flavin-dependent oxidoreductase;protein_id=PMC19664.1;transl_table=11 PNGG01000002.1 Genbank gene 206805 207947 . + . ID=gene-CJ235_04680;Name=CJ235_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04680 PNGG01000002.1 Protein Homology CDS 206805 207947 . + 0 ID=cds-PMC19665.1;Parent=gene-CJ235_04680;Dbxref=NCBI_GP:PMC19665.1;Name=PMC19665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471009.1;locus_tag=CJ235_04680;product=cysteine desulfurase;protein_id=PMC19665.1;transl_table=11 PNGG01000002.1 Genbank gene 207948 209060 . + . ID=gene-CJ235_04685;Name=CJ235_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04685 PNGG01000002.1 Protein Homology CDS 207948 209060 . + 0 ID=cds-PMC19666.1;Parent=gene-CJ235_04685;Dbxref=NCBI_GP:PMC19666.1;Name=PMC19666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469417.1;locus_tag=CJ235_04685;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=PMC19666.1;transl_table=11 PNGG01000002.1 Genbank gene 209618 210274 . + . ID=gene-CJ235_04690;Name=CJ235_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04690 PNGG01000002.1 Protein Homology CDS 209618 210274 . + 0 ID=cds-PMC19667.1;Parent=gene-CJ235_04690;Dbxref=NCBI_GP:PMC19667.1;Name=PMC19667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302966.1;locus_tag=CJ235_04690;product=tetratricopeptide repeat protein;protein_id=PMC19667.1;transl_table=11 PNGG01000002.1 Genbank gene 210295 212757 . + . ID=gene-CJ235_04695;Name=CJ235_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04695 PNGG01000002.1 Protein Homology CDS 210295 212757 . + 0 ID=cds-PMC19668.1;Parent=gene-CJ235_04695;Dbxref=NCBI_GP:PMC19668.1;Name=PMC19668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500232.1;locus_tag=CJ235_04695;product=ATP-dependent RecD-like DNA helicase;protein_id=PMC19668.1;transl_table=11 PNGG01000002.1 Genbank gene 213087 215717 . + . ID=gene-CJ235_04700;Name=CJ235_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04700 PNGG01000002.1 Protein Homology CDS 213087 215717 . + 0 ID=cds-PMC19669.1;Parent=gene-CJ235_04700;Dbxref=NCBI_GP:PMC19669.1;Name=PMC19669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=CJ235_04700;product=alanine--tRNA ligase;protein_id=PMC19669.1;transl_table=11 PNGG01000002.1 Genbank gene 215786 216049 . + . ID=gene-CJ235_04705;Name=CJ235_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04705 PNGG01000002.1 Protein Homology CDS 215786 216049 . + 0 ID=cds-PMC19670.1;Parent=gene-CJ235_04705;Dbxref=NCBI_GP:PMC19670.1;Name=PMC19670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507438.1;locus_tag=CJ235_04705;product=IreB family regulatory phosphoprotein;protein_id=PMC19670.1;transl_table=11 PNGG01000002.1 Genbank gene 216052 216480 . + . ID=gene-CJ235_04710;Name=CJ235_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04710 PNGG01000002.1 Protein Homology CDS 216052 216480 . + 0 ID=cds-PMC19671.1;Parent=gene-CJ235_04710;Dbxref=NCBI_GP:PMC19671.1;Name=PMC19671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764854.1;locus_tag=CJ235_04710;product=Holliday junction resolvase RuvX;protein_id=PMC19671.1;transl_table=11 PNGG01000002.1 Genbank gene 216496 216807 . + . ID=gene-CJ235_04715;Name=CJ235_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04715 PNGG01000002.1 Protein Homology CDS 216496 216807 . + 0 ID=cds-PMC19672.1;Parent=gene-CJ235_04715;Dbxref=NCBI_GP:PMC19672.1;Name=PMC19672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462083.1;locus_tag=CJ235_04715;product=DUF1292 domain-containing protein;protein_id=PMC19672.1;transl_table=11 PNGG01000002.1 Genbank gene 217129 217767 . + . ID=gene-CJ235_04720;Name=CJ235_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04720 PNGG01000002.1 Protein Homology CDS 217129 217767 . + 0 ID=cds-PMC19673.1;Parent=gene-CJ235_04720;Dbxref=NCBI_GP:PMC19673.1;Name=PMC19673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507441.1;locus_tag=CJ235_04720;product=O-methyltransferase;protein_id=PMC19673.1;transl_table=11 PNGG01000002.1 Genbank gene 217769 218692 . + . ID=gene-CJ235_04725;Name=CJ235_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04725 PNGG01000002.1 Protein Homology CDS 217769 218692 . + 0 ID=cds-PMC19674.1;Parent=gene-CJ235_04725;Dbxref=NCBI_GP:PMC19674.1;Name=PMC19674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764851.1;locus_tag=CJ235_04725;product=U32 family peptidase;protein_id=PMC19674.1;transl_table=11 PNGG01000002.1 Genbank gene 218708 219979 . + . ID=gene-CJ235_04730;Name=CJ235_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04730 PNGG01000002.1 Protein Homology CDS 218708 219979 . + 0 ID=cds-PMC19994.1;Parent=gene-CJ235_04730;Dbxref=NCBI_GP:PMC19994.1;Name=PMC19994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471048.1;locus_tag=CJ235_04730;product=collagenase-like protease;protein_id=PMC19994.1;transl_table=11 PNGG01000002.1 Genbank gene 219976 220599 . + . ID=gene-CJ235_04735;Name=CJ235_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04735 PNGG01000002.1 Protein Homology CDS 219976 220599 . + 0 ID=cds-PMC19675.1;Parent=gene-CJ235_04735;Dbxref=NCBI_GP:PMC19675.1;Name=PMC19675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898206.1;locus_tag=CJ235_04735;product=uridine kinase;protein_id=PMC19675.1;transl_table=11 PNGG01000002.1 Genbank gene 220626 221102 . + . ID=gene-CJ235_04740;Name=CJ235_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04740 PNGG01000002.1 Protein Homology CDS 220626 221102 . + 0 ID=cds-PMC19676.1;Parent=gene-CJ235_04740;Dbxref=NCBI_GP:PMC19676.1;Name=PMC19676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764848.1;locus_tag=CJ235_04740;product=transcription elongation factor GreA;protein_id=PMC19676.1;transl_table=11 PNGG01000002.1 Genbank gene 221488 222228 . + . ID=gene-CJ235_04745;Name=CJ235_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04745 PNGG01000002.1 Protein Homology CDS 221488 222228 . + 0 ID=cds-PMC19677.1;Parent=gene-CJ235_04745;Dbxref=NCBI_GP:PMC19677.1;Name=PMC19677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466221.1;locus_tag=CJ235_04745;product=allophanate hydrolase;protein_id=PMC19677.1;transl_table=11 PNGG01000002.1 Genbank gene 222212 223219 . + . ID=gene-CJ235_04750;Name=CJ235_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04750 PNGG01000002.1 Protein Homology CDS 222212 223219 . + 0 ID=cds-PMC19678.1;Parent=gene-CJ235_04750;Dbxref=NCBI_GP:PMC19678.1;Name=PMC19678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471040.1;locus_tag=CJ235_04750;product=allophanate hydrolase;protein_id=PMC19678.1;transl_table=11 PNGG01000002.1 Genbank gene 223219 223671 . + . ID=gene-CJ235_04755;Name=CJ235_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04755 PNGG01000002.1 Protein Homology CDS 223219 223671 . + 0 ID=cds-PMC19679.1;Parent=gene-CJ235_04755;Dbxref=NCBI_GP:PMC19679.1;Name=PMC19679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453375.1;locus_tag=CJ235_04755;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=PMC19679.1;transl_table=11 PNGG01000002.1 Genbank gene 223695 225050 . + . ID=gene-CJ235_04760;Name=CJ235_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04760 PNGG01000002.1 Protein Homology CDS 223695 225050 . + 0 ID=cds-PMC19680.1;Parent=gene-CJ235_04760;Dbxref=NCBI_GP:PMC19680.1;Name=PMC19680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471042.1;locus_tag=CJ235_04760;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=PMC19680.1;transl_table=11 PNGG01000002.1 Genbank gene 225053 225811 . + . ID=gene-CJ235_04765;Name=CJ235_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04765 PNGG01000002.1 Protein Homology CDS 225053 225811 . + 0 ID=cds-PMC19681.1;Parent=gene-CJ235_04765;Dbxref=NCBI_GP:PMC19681.1;Name=PMC19681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302978.1;locus_tag=CJ235_04765;product=LamB/YcsF family protein;protein_id=PMC19681.1;transl_table=11 PNGG01000002.1 Genbank gene 225815 227044 . + . ID=gene-CJ235_04770;Name=CJ235_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04770 PNGG01000002.1 Protein Homology CDS 225815 227044 . + 0 ID=cds-PMC19682.1;Parent=gene-CJ235_04770;Dbxref=NCBI_GP:PMC19682.1;Name=PMC19682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458959.1;locus_tag=CJ235_04770;product=divalent metal cation transporter;protein_id=PMC19682.1;transl_table=11 PNGG01000002.1 Genbank gene 227347 227763 . - . ID=gene-CJ235_04775;Name=CJ235_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04775 PNGG01000002.1 Protein Homology CDS 227347 227763 . - 0 ID=cds-PMC19683.1;Parent=gene-CJ235_04775;Dbxref=NCBI_GP:PMC19683.1;Name=PMC19683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471056.1;locus_tag=CJ235_04775;product=carboxymuconolactone decarboxylase family protein;protein_id=PMC19683.1;transl_table=11 PNGG01000002.1 Genbank gene 227842 228744 . - . ID=gene-CJ235_04780;Name=CJ235_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04780 PNGG01000002.1 Protein Homology CDS 227842 228744 . - 0 ID=cds-PMC19684.1;Parent=gene-CJ235_04780;Dbxref=NCBI_GP:PMC19684.1;Name=PMC19684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03466.18;locus_tag=CJ235_04780;product=LysR family transcriptional regulator;protein_id=PMC19684.1;transl_table=11 PNGG01000002.1 Genbank gene 228858 229688 . + . ID=gene-CJ235_04785;Name=CJ235_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04785 PNGG01000002.1 Protein Homology CDS 228858 229688 . + 0 ID=cds-PMC19685.1;Parent=gene-CJ235_04785;Dbxref=NCBI_GP:PMC19685.1;Name=PMC19685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03446.13;locus_tag=CJ235_04785;product=NAD(P)-dependent oxidoreductase;protein_id=PMC19685.1;transl_table=11 PNGG01000002.1 Genbank gene 229760 230944 . - . ID=gene-CJ235_04790;Name=CJ235_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04790 PNGG01000002.1 Protein Homology CDS 229760 230944 . - 0 ID=cds-PMC19686.1;Parent=gene-CJ235_04790;Dbxref=NCBI_GP:PMC19686.1;Name=PMC19686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471034.1;locus_tag=CJ235_04790;product=MFS transporter;protein_id=PMC19686.1;transl_table=11 PNGG01000002.1 Genbank pseudogene 231208 231900 . + . ID=gene-CJ235_04795;Name=CJ235_04795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_04795;pseudo=true PNGG01000002.1 Protein Homology CDS 231208 231900 . + 0 ID=cds-CJ235_04795;Parent=gene-CJ235_04795;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109886.1;locus_tag=CJ235_04795;product=flavin reductase;pseudo=true;transl_table=11 PNGG01000002.1 Genbank gene 232093 232794 . + . ID=gene-CJ235_04800;Name=CJ235_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04800 PNGG01000002.1 Protein Homology CDS 232093 232794 . + 0 ID=cds-PMC19687.1;Parent=gene-CJ235_04800;Dbxref=NCBI_GP:PMC19687.1;Name=PMC19687.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471057.1;locus_tag=CJ235_04800;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=PMC19687.1;transl_table=11 PNGG01000002.1 Genbank gene 232797 233324 . + . ID=gene-CJ235_04805;Name=CJ235_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04805 PNGG01000002.1 Protein Homology CDS 232797 233324 . + 0 ID=cds-PMC19688.1;Parent=gene-CJ235_04805;Dbxref=NCBI_GP:PMC19688.1;Name=PMC19688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507452.1;locus_tag=CJ235_04805;product=YqeG family HAD IIIA-type phosphatase;protein_id=PMC19688.1;transl_table=11 PNGG01000002.1 Genbank gene 233325 234431 . + . ID=gene-CJ235_04810;Name=CJ235_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04810 PNGG01000002.1 Protein Homology CDS 233325 234431 . + 0 ID=cds-PMC19689.1;Parent=gene-CJ235_04810;Dbxref=NCBI_GP:PMC19689.1;Name=PMC19689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510482.1;locus_tag=CJ235_04810;product=ribosome biogenesis GTPase YqeH;protein_id=PMC19689.1;transl_table=11 PNGG01000002.1 Genbank gene 234444 235250 . + . ID=gene-CJ235_04815;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CJ235_04815 PNGG01000002.1 Protein Homology CDS 234444 235250 . + 0 ID=cds-PMC19690.1;Parent=gene-CJ235_04815;Dbxref=NCBI_GP:PMC19690.1;Name=PMC19690.1;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471054.1;locus_tag=CJ235_04815;product=shikimate dehydrogenase;protein_id=PMC19690.1;transl_table=11 PNGG01000002.1 Genbank gene 235253 235546 . + . ID=gene-CJ235_04820;Name=CJ235_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04820 PNGG01000002.1 Protein Homology CDS 235253 235546 . + 0 ID=cds-PMC19691.1;Parent=gene-CJ235_04820;Dbxref=NCBI_GP:PMC19691.1;Name=PMC19691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764836.1;locus_tag=CJ235_04820;product=ribosome assembly RNA-binding protein YhbY;protein_id=PMC19691.1;transl_table=11 PNGG01000002.1 Genbank gene 235546 236124 . + . ID=gene-CJ235_04825;Name=CJ235_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04825 PNGG01000002.1 Protein Homology CDS 235546 236124 . + 0 ID=cds-PMC19692.1;Parent=gene-CJ235_04825;Dbxref=NCBI_GP:PMC19692.1;Name=PMC19692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471063.1;locus_tag=CJ235_04825;product=nicotinate-nucleotide adenylyltransferase;protein_id=PMC19692.1;transl_table=11 PNGG01000002.1 Genbank gene 236117 236701 . + . ID=gene-CJ235_04830;Name=CJ235_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04830 PNGG01000002.1 Protein Homology CDS 236117 236701 . + 0 ID=cds-PMC19693.1;Parent=gene-CJ235_04830;Dbxref=NCBI_GP:PMC19693.1;Name=PMC19693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275620.1;locus_tag=CJ235_04830;product=HD domain-containing protein;protein_id=PMC19693.1;transl_table=11 PNGG01000002.1 Genbank gene 236702 237055 . + . ID=gene-CJ235_04835;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CJ235_04835 PNGG01000002.1 Protein Homology CDS 236702 237055 . + 0 ID=cds-PMC19694.1;Parent=gene-CJ235_04835;Dbxref=NCBI_GP:PMC19694.1;Name=PMC19694.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764833.1;locus_tag=CJ235_04835;product=ribosome silencing factor;protein_id=PMC19694.1;transl_table=11 PNGG01000002.1 Genbank gene 237058 237774 . + . ID=gene-CJ235_04840;Name=CJ235_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04840 PNGG01000002.1 Protein Homology CDS 237058 237774 . + 0 ID=cds-PMC19695.1;Parent=gene-CJ235_04840;Dbxref=NCBI_GP:PMC19695.1;Name=PMC19695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507459.1;locus_tag=CJ235_04840;product=class I SAM-dependent methyltransferase;protein_id=PMC19695.1;transl_table=11 PNGG01000002.1 Genbank gene 237823 238542 . + . ID=gene-CJ235_04845;Name=CJ235_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04845 PNGG01000002.1 Protein Homology CDS 237823 238542 . + 0 ID=cds-PMC19696.1;Parent=gene-CJ235_04845;Dbxref=NCBI_GP:PMC19696.1;Name=PMC19696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12836.5;locus_tag=CJ235_04845;product=hypothetical protein;protein_id=PMC19696.1;transl_table=11 PNGG01000002.1 Genbank gene 238617 239075 . + . ID=gene-CJ235_04850;Name=CJ235_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04850 PNGG01000002.1 Protein Homology CDS 238617 239075 . + 0 ID=cds-PMC19697.1;Parent=gene-CJ235_04850;Dbxref=NCBI_GP:PMC19697.1;Name=PMC19697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275624.1;locus_tag=CJ235_04850;product=ComE operon protein 2;protein_id=PMC19697.1;transl_table=11 PNGG01000002.1 Genbank gene 239077 241311 . + . ID=gene-CJ235_04855;Name=CJ235_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04855 PNGG01000002.1 Protein Homology CDS 239077 241311 . + 0 ID=cds-PMC19698.1;Parent=gene-CJ235_04855;Dbxref=NCBI_GP:PMC19698.1;Name=PMC19698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00361;locus_tag=CJ235_04855;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=PMC19698.1;transl_table=11 PNGG01000002.1 Genbank gene 241372 242346 . + . ID=gene-CJ235_04860;Name=CJ235_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04860 PNGG01000002.1 Protein Homology CDS 241372 242346 . + 0 ID=cds-PMC19699.1;Parent=gene-CJ235_04860;Dbxref=NCBI_GP:PMC19699.1;Name=PMC19699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512461.1;locus_tag=CJ235_04860;product=DNA polymerase III subunit delta;protein_id=PMC19699.1;transl_table=11 PNGG01000002.1 Genbank gene 242414 242665 . - . ID=gene-CJ235_04865;Name=CJ235_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04865 PNGG01000002.1 Protein Homology CDS 242414 242665 . - 0 ID=cds-PMC19700.1;Parent=gene-CJ235_04865;Dbxref=NCBI_GP:PMC19700.1;Name=PMC19700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764827.1;locus_tag=CJ235_04865;product=30S ribosomal protein S20;protein_id=PMC19700.1;transl_table=11 PNGG01000002.1 Genbank gene 243119 244942 . + . ID=gene-CJ235_04870;Name=CJ235_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04870 PNGG01000002.1 Protein Homology CDS 243119 244942 . + 0 ID=cds-PMC19701.1;Parent=gene-CJ235_04870;Dbxref=NCBI_GP:PMC19701.1;Name=PMC19701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764826.1;locus_tag=CJ235_04870;product=elongation factor 4;protein_id=PMC19701.1;transl_table=11 PNGG01000002.1 Genbank gene 245025 246149 . + . ID=gene-CJ235_04875;Name=CJ235_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04875 PNGG01000002.1 Protein Homology CDS 245025 246149 . + 0 ID=cds-PMC19702.1;Parent=gene-CJ235_04875;Dbxref=NCBI_GP:PMC19702.1;Name=PMC19702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453365.1;locus_tag=CJ235_04875;product=coproporphyrinogen III oxidase;protein_id=PMC19702.1;transl_table=11 PNGG01000002.1 Genbank gene 246261 247241 . + . ID=gene-CJ235_04880;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=CJ235_04880 PNGG01000002.1 Protein Homology CDS 246261 247241 . + 0 ID=cds-PMC19703.1;Parent=gene-CJ235_04880;Dbxref=NCBI_GP:PMC19703.1;Name=PMC19703.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302992.1;locus_tag=CJ235_04880;product=heat-inducible transcription repressor HrcA;protein_id=PMC19703.1;transl_table=11 PNGG01000002.1 Genbank gene 247266 247919 . + . ID=gene-CJ235_04885;Name=CJ235_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04885 PNGG01000002.1 Protein Homology CDS 247266 247919 . + 0 ID=cds-PMC19704.1;Parent=gene-CJ235_04885;Dbxref=NCBI_GP:PMC19704.1;Name=PMC19704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507468.1;locus_tag=CJ235_04885;product=nucleotide exchange factor GrpE;protein_id=PMC19704.1;transl_table=11 PNGG01000002.1 Genbank gene 247972 249816 . + . ID=gene-CJ235_04890;Name=CJ235_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04890 PNGG01000002.1 Protein Homology CDS 247972 249816 . + 0 ID=cds-PMC19705.1;Parent=gene-CJ235_04890;Dbxref=NCBI_GP:PMC19705.1;Name=PMC19705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471041.1;locus_tag=CJ235_04890;product=molecular chaperone DnaK;protein_id=PMC19705.1;transl_table=11 PNGG01000002.1 Genbank gene 249936 251069 . + . ID=gene-CJ235_04895;Name=CJ235_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04895 PNGG01000002.1 Protein Homology CDS 249936 251069 . + 0 ID=cds-PMC19706.1;Parent=gene-CJ235_04895;Dbxref=NCBI_GP:PMC19706.1;Name=PMC19706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CJ235_04895;product=molecular chaperone DnaJ;protein_id=PMC19706.1;transl_table=11 PNGG01000002.1 Genbank gene 251073 252011 . + . ID=gene-CJ235_04900;Name=CJ235_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04900 PNGG01000002.1 Protein Homology CDS 251073 252011 . + 0 ID=cds-PMC19707.1;Parent=gene-CJ235_04900;Dbxref=NCBI_GP:PMC19707.1;Name=PMC19707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176210.1;locus_tag=CJ235_04900;product=50S ribosomal protein L11 methyltransferase;protein_id=PMC19707.1;transl_table=11 PNGG01000002.1 Genbank gene 252014 252766 . + . ID=gene-CJ235_04905;Name=CJ235_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04905 PNGG01000002.1 Protein Homology CDS 252014 252766 . + 0 ID=cds-PMC19708.1;Parent=gene-CJ235_04905;Dbxref=NCBI_GP:PMC19708.1;Name=PMC19708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500190.1;locus_tag=CJ235_04905;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=PMC19708.1;transl_table=11 PNGG01000002.1 Genbank gene 252772 254118 . + . ID=gene-CJ235_04910;Name=CJ235_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04910 PNGG01000002.1 Protein Homology CDS 252772 254118 . + 0 ID=cds-PMC19709.1;Parent=gene-CJ235_04910;Dbxref=NCBI_GP:PMC19709.1;Name=PMC19709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764818.1;locus_tag=CJ235_04910;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=PMC19709.1;transl_table=11 PNGG01000002.1 Genbank gene 254362 254538 . + . ID=gene-CJ235_04915;Name=CJ235_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04915 PNGG01000002.1 Protein Homology CDS 254362 254538 . + 0 ID=cds-PMC19710.1;Parent=gene-CJ235_04915;Dbxref=NCBI_GP:PMC19710.1;Name=PMC19710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CJ235_04915;product=30S ribosomal protein S21;protein_id=PMC19710.1;transl_table=11 PNGG01000002.1 Genbank gene 254829 255539 . + . ID=gene-CJ235_04920;Name=CJ235_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04920 PNGG01000002.1 Protein Homology CDS 254829 255539 . + 0 ID=cds-PMC19711.1;Parent=gene-CJ235_04920;Dbxref=NCBI_GP:PMC19711.1;Name=PMC19711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507474.1;locus_tag=CJ235_04920;product=serine protease;protein_id=PMC19711.1;transl_table=11 PNGG01000002.1 Genbank gene 255559 256551 . + . ID=gene-CJ235_04925;Name=CJ235_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04925 PNGG01000002.1 Protein Homology CDS 255559 256551 . + 0 ID=cds-PMC19712.1;Parent=gene-CJ235_04925;Dbxref=NCBI_GP:PMC19712.1;Name=PMC19712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764815.1;locus_tag=CJ235_04925;product=UPF0365 family protein;protein_id=PMC19712.1;transl_table=11 PNGG01000002.1 Genbank gene 256566 257228 . + . ID=gene-CJ235_04930;Name=CJ235_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04930 PNGG01000002.1 GeneMarkS+ CDS 256566 257228 . + 0 ID=cds-PMC19713.1;Parent=gene-CJ235_04930;Dbxref=NCBI_GP:PMC19713.1;Name=PMC19713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_04930;product=signal recognition particle-docking protein FtsY;protein_id=PMC19713.1;transl_table=11 PNGG01000002.1 Genbank gene 257516 258463 . + . ID=gene-CJ235_04935;Name=CJ235_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04935 PNGG01000002.1 Protein Homology CDS 257516 258463 . + 0 ID=cds-PMC19714.1;Parent=gene-CJ235_04935;Dbxref=NCBI_GP:PMC19714.1;Name=PMC19714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764813.1;locus_tag=CJ235_04935;product=PhoH family protein;protein_id=PMC19714.1;transl_table=11 PNGG01000002.1 Genbank gene 258464 258925 . + . ID=gene-CJ235_04940;Name=CJ235_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04940 PNGG01000002.1 Protein Homology CDS 258464 258925 . + 0 ID=cds-PMC19715.1;Parent=gene-CJ235_04940;Dbxref=NCBI_GP:PMC19715.1;Name=PMC19715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275642.1;locus_tag=CJ235_04940;product=rRNA maturation RNase YbeY;protein_id=PMC19715.1;transl_table=11 PNGG01000002.1 Genbank gene 258930 259265 . + . ID=gene-CJ235_04945;Name=CJ235_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04945 PNGG01000002.1 Protein Homology CDS 258930 259265 . + 0 ID=cds-PMC19716.1;Parent=gene-CJ235_04945;Dbxref=NCBI_GP:PMC19716.1;Name=PMC19716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764811.1;locus_tag=CJ235_04945;product=diacylglycerol kinase;protein_id=PMC19716.1;transl_table=11 PNGG01000002.1 Genbank gene 259337 260236 . + . ID=gene-CJ235_04950;Name=CJ235_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04950 PNGG01000002.1 Protein Homology CDS 259337 260236 . + 0 ID=cds-PMC19717.1;Parent=gene-CJ235_04950;Dbxref=NCBI_GP:PMC19717.1;Name=PMC19717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134760.1;locus_tag=CJ235_04950;product=GTPase Era;protein_id=PMC19717.1;transl_table=11 PNGG01000002.1 Genbank gene 260261 261022 . + . ID=gene-CJ235_04955;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CJ235_04955 PNGG01000002.1 Protein Homology CDS 260261 261022 . + 0 ID=cds-PMC19718.1;Parent=gene-CJ235_04955;Dbxref=NCBI_GP:PMC19718.1;Name=PMC19718.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724601.1;locus_tag=CJ235_04955;product=DNA repair protein RecO;protein_id=PMC19718.1;transl_table=11 PNGG01000002.1 Genbank gene 261194 262585 . - . ID=gene-CJ235_04960;Name=CJ235_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04960 PNGG01000002.1 Protein Homology CDS 261194 262585 . - 0 ID=cds-PMC19719.1;Parent=gene-CJ235_04960;Dbxref=NCBI_GP:PMC19719.1;Name=PMC19719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764807.1;locus_tag=CJ235_04960;product=glycine--tRNA ligase;protein_id=PMC19719.1;transl_table=11 PNGG01000002.1 Genbank gene 262975 263598 . + . ID=gene-CJ235_04965;Name=CJ235_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04965 PNGG01000002.1 Protein Homology CDS 262975 263598 . + 0 ID=cds-PMC19720.1;Parent=gene-CJ235_04965;Dbxref=NCBI_GP:PMC19720.1;Name=PMC19720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=CJ235_04965;product=transcriptional regulator;protein_id=PMC19720.1;transl_table=11 PNGG01000002.1 Genbank gene 263613 264449 . + . ID=gene-CJ235_04970;Name=CJ235_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04970 PNGG01000002.1 Protein Homology CDS 263613 264449 . + 0 ID=cds-PMC19721.1;Parent=gene-CJ235_04970;Dbxref=NCBI_GP:PMC19721.1;Name=PMC19721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471126.1;locus_tag=CJ235_04970;product=kinase/pyrophosphorylase;protein_id=PMC19721.1;transl_table=11 PNGG01000002.1 Genbank gene 264476 266257 . + . ID=gene-CJ235_04975;Name=CJ235_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04975 PNGG01000002.1 Protein Homology CDS 264476 266257 . + 0 ID=cds-PMC19722.1;Parent=gene-CJ235_04975;Dbxref=NCBI_GP:PMC19722.1;Name=PMC19722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471123.1;locus_tag=CJ235_04975;product=DNA primase;protein_id=PMC19722.1;transl_table=11 PNGG01000002.1 Genbank gene 266394 267500 . + . ID=gene-CJ235_04980;Name=CJ235_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04980 PNGG01000002.1 Protein Homology CDS 266394 267500 . + 0 ID=cds-PMC19723.1;Parent=gene-CJ235_04980;Dbxref=NCBI_GP:PMC19723.1;Name=PMC19723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CJ235_04980;product=RNA polymerase sigma factor RpoD;protein_id=PMC19723.1;transl_table=11 PNGG01000002.1 Genbank gene 267586 268269 . + . ID=gene-CJ235_04985;Name=CJ235_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04985 PNGG01000002.1 Protein Homology CDS 267586 268269 . + 0 ID=cds-PMC19724.1;Parent=gene-CJ235_04985;Dbxref=NCBI_GP:PMC19724.1;Name=PMC19724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472488.1;locus_tag=CJ235_04985;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=PMC19724.1;transl_table=11 PNGG01000002.1 Genbank gene 268266 269366 . + . ID=gene-CJ235_04990;Name=CJ235_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04990 PNGG01000002.1 Protein Homology CDS 268266 269366 . + 0 ID=cds-PMC19725.1;Parent=gene-CJ235_04990;Dbxref=NCBI_GP:PMC19725.1;Name=PMC19725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472473.1;locus_tag=CJ235_04990;product=Nif3-like dinuclear metal center hexameric protein;protein_id=PMC19725.1;transl_table=11 PNGG01000002.1 Genbank gene 269493 270830 . + . ID=gene-CJ235_04995;Name=CJ235_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_04995 PNGG01000002.1 Protein Homology CDS 269493 270830 . + 0 ID=cds-PMC19726.1;Parent=gene-CJ235_04995;Dbxref=NCBI_GP:PMC19726.1;Name=PMC19726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361980.1;locus_tag=CJ235_04995;product=DEAD/DEAH box helicase;protein_id=PMC19726.1;transl_table=11 PNGG01000002.1 Genbank gene 270847 271743 . + . ID=gene-CJ235_05000;Name=CJ235_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05000 PNGG01000002.1 Protein Homology CDS 270847 271743 . + 0 ID=cds-PMC19727.1;Parent=gene-CJ235_05000;Dbxref=NCBI_GP:PMC19727.1;Name=PMC19727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472481.1;locus_tag=CJ235_05000;product=deoxyribonuclease IV;protein_id=PMC19727.1;transl_table=11 PNGG01000002.1 Genbank gene 272002 272775 . + . ID=gene-CJ235_05005;Name=CJ235_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05005 PNGG01000002.1 Protein Homology CDS 272002 272775 . + 0 ID=cds-PMC19728.1;Parent=gene-CJ235_05005;Dbxref=NCBI_GP:PMC19728.1;Name=PMC19728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469359.1;locus_tag=CJ235_05005;product=metal ABC transporter ATP-binding protein;protein_id=PMC19728.1;transl_table=11 PNGG01000002.1 Genbank gene 272772 273635 . + . ID=gene-CJ235_05010;Name=CJ235_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05010 PNGG01000002.1 Protein Homology CDS 272772 273635 . + 0 ID=cds-PMC19729.1;Parent=gene-CJ235_05010;Dbxref=NCBI_GP:PMC19729.1;Name=PMC19729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469358.1;locus_tag=CJ235_05010;product=metal ABC transporter permease;protein_id=PMC19729.1;transl_table=11 PNGG01000002.1 Genbank gene 273622 274038 . + . ID=gene-CJ235_05015;Name=CJ235_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05015 PNGG01000002.1 Protein Homology CDS 273622 274038 . + 0 ID=cds-PMC19730.1;Parent=gene-CJ235_05015;Dbxref=NCBI_GP:PMC19730.1;Name=PMC19730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483178.1;locus_tag=CJ235_05015;product=transcriptional repressor;protein_id=PMC19730.1;transl_table=11 PNGG01000002.1 Genbank gene 274361 274960 . + . ID=gene-CJ235_05020;Name=CJ235_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05020 PNGG01000002.1 Protein Homology CDS 274361 274960 . + 0 ID=cds-PMC19731.1;Parent=gene-CJ235_05020;Dbxref=NCBI_GP:PMC19731.1;Name=PMC19731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636261.1;locus_tag=CJ235_05020;product=superoxide dismutase;protein_id=PMC19731.1;transl_table=11 PNGG01000002.1 Genbank gene 275167 277215 . + . ID=gene-CJ235_05025;Name=CJ235_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05025 PNGG01000002.1 Protein Homology CDS 275167 277215 . + 0 ID=cds-PMC19732.1;Parent=gene-CJ235_05025;Dbxref=NCBI_GP:PMC19732.1;Name=PMC19732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472497.1;locus_tag=CJ235_05025;product=penicillin-binding protein 2;protein_id=PMC19732.1;transl_table=11 PNGG01000002.1 Genbank gene 277337 277486 . + . ID=gene-CJ235_05030;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CJ235_05030 PNGG01000002.1 Protein Homology CDS 277337 277486 . + 0 ID=cds-PMC19733.1;Parent=gene-CJ235_05030;Dbxref=NCBI_GP:PMC19733.1;Name=PMC19733.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CJ235_05030;product=50S ribosomal protein L33;protein_id=PMC19733.1;transl_table=11 PNGG01000002.1 Genbank gene 277949 278485 . + . ID=gene-CJ235_05035;Name=CJ235_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05035 PNGG01000002.1 Protein Homology CDS 277949 278485 . + 0 ID=cds-PMC19734.1;Parent=gene-CJ235_05035;Dbxref=NCBI_GP:PMC19734.1;Name=PMC19734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382545.1;locus_tag=CJ235_05035;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=PMC19734.1;transl_table=11 PNGG01000002.1 Genbank gene 278498 279937 . + . ID=gene-CJ235_05040;Name=CJ235_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05040 PNGG01000002.1 Protein Homology CDS 278498 279937 . + 0 ID=cds-PMC19735.1;Parent=gene-CJ235_05040;Dbxref=NCBI_GP:PMC19735.1;Name=PMC19735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433611.1;locus_tag=CJ235_05040;product=rhomboid family intramembrane serine protease;protein_id=PMC19735.1;transl_table=11 PNGG01000002.1 Genbank gene 279939 280133 . + . ID=gene-CJ235_05045;Name=CJ235_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05045 PNGG01000002.1 Protein Homology CDS 279939 280133 . + 0 ID=cds-PMC19736.1;Parent=gene-CJ235_05045;Dbxref=NCBI_GP:PMC19736.1;Name=PMC19736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509763.1;locus_tag=CJ235_05045;product=DUF910 domain-containing protein;protein_id=PMC19736.1;transl_table=11 PNGG01000002.1 Genbank gene 280138 281124 . + . ID=gene-CJ235_05050;Name=CJ235_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05050 PNGG01000002.1 Protein Homology CDS 280138 281124 . + 0 ID=cds-PMC19737.1;Parent=gene-CJ235_05050;Dbxref=NCBI_GP:PMC19737.1;Name=PMC19737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500158.1;locus_tag=CJ235_05050;product=glucokinase;protein_id=PMC19737.1;transl_table=11 PNGG01000002.1 Genbank gene 281124 281450 . + . ID=gene-CJ235_05055;Name=CJ235_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05055 PNGG01000002.1 Protein Homology CDS 281124 281450 . + 0 ID=cds-PMC19738.1;Parent=gene-CJ235_05055;Dbxref=NCBI_GP:PMC19738.1;Name=PMC19738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433945.1;locus_tag=CJ235_05055;product=hypothetical protein;protein_id=PMC19738.1;transl_table=11 PNGG01000002.1 Genbank gene 281450 282076 . + . ID=gene-CJ235_05060;Name=CJ235_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05060 PNGG01000002.1 Protein Homology CDS 281450 282076 . + 0 ID=cds-PMC19739.1;Parent=gene-CJ235_05060;Dbxref=NCBI_GP:PMC19739.1;Name=PMC19739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465751.1;locus_tag=CJ235_05060;product=MBL fold metallo-hydrolase;protein_id=PMC19739.1;transl_table=11 PNGG01000002.1 Genbank gene 282143 283117 . + . ID=gene-CJ235_05065;Name=CJ235_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05065 PNGG01000002.1 Protein Homology CDS 282143 283117 . + 0 ID=cds-PMC19740.1;Parent=gene-CJ235_05065;Dbxref=NCBI_GP:PMC19740.1;Name=PMC19740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507503.1;locus_tag=CJ235_05065;product=competence protein ComGA;protein_id=PMC19740.1;transl_table=11 PNGG01000002.1 Genbank gene 283089 284156 . + . ID=gene-CJ235_05070;Name=CJ235_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05070 PNGG01000002.1 Protein Homology CDS 283089 284156 . + 0 ID=cds-PMC19741.1;Parent=gene-CJ235_05070;Dbxref=NCBI_GP:PMC19741.1;Name=PMC19741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507504.1;locus_tag=CJ235_05070;product=type II secretion system F family protein;protein_id=PMC19741.1;transl_table=11 PNGG01000002.1 Genbank gene 284170 284487 . + . ID=gene-CJ235_05075;Name=CJ235_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05075 PNGG01000002.1 Protein Homology CDS 284170 284487 . + 0 ID=cds-PMC19742.1;Parent=gene-CJ235_05075;Dbxref=NCBI_GP:PMC19742.1;Name=PMC19742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465742.1;locus_tag=CJ235_05075;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=PMC19742.1;transl_table=11 PNGG01000002.1 Genbank gene 284477 284917 . + . ID=gene-CJ235_05080;Name=CJ235_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05080 PNGG01000002.1 GeneMarkS+ CDS 284477 284917 . + 0 ID=cds-PMC19743.1;Parent=gene-CJ235_05080;Dbxref=NCBI_GP:PMC19743.1;Name=PMC19743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_05080;product=type II secretion system protein;protein_id=PMC19743.1;transl_table=11 PNGG01000002.1 Genbank gene 284937 285191 . + . ID=gene-CJ235_05085;Name=CJ235_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05085 PNGG01000002.1 GeneMarkS+ CDS 284937 285191 . + 0 ID=cds-PMC19744.1;Parent=gene-CJ235_05085;Dbxref=NCBI_GP:PMC19744.1;Name=PMC19744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_05085;product=hypothetical protein;protein_id=PMC19744.1;transl_table=11 PNGG01000002.1 Genbank gene 285121 285606 . + . ID=gene-CJ235_05090;Name=CJ235_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05090 PNGG01000002.1 Protein Homology CDS 285121 285606 . + 0 ID=cds-PMC19745.1;Parent=gene-CJ235_05090;Dbxref=NCBI_GP:PMC19745.1;Name=PMC19745.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF15980.3;locus_tag=CJ235_05090;product=competence protein;protein_id=PMC19745.1;transl_table=11 PNGG01000002.1 Genbank gene 285813 286286 . + . ID=gene-CJ235_05095;Name=CJ235_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05095 PNGG01000002.1 Protein Homology CDS 285813 286286 . + 0 ID=cds-PMC19746.1;Parent=gene-CJ235_05095;Dbxref=NCBI_GP:PMC19746.1;Name=PMC19746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483192.1;locus_tag=CJ235_05095;product=shikimate kinase;protein_id=PMC19746.1;transl_table=11 PNGG01000002.1 cmsearch riboswitch 286283 286386 . + . ID=id-PNGG01000002.1:286283..286386;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000002.1 Genbank gene 286465 287556 . + . ID=gene-CJ235_05100;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CJ235_05100 PNGG01000002.1 Protein Homology CDS 286465 287556 . + 0 ID=cds-PMC19747.1;Parent=gene-CJ235_05100;Dbxref=NCBI_GP:PMC19747.1;Name=PMC19747.1;gbkey=CDS;gene=gcvT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533300.1;locus_tag=CJ235_05100;product=glycine cleavage system protein T;protein_id=PMC19747.1;transl_table=11 PNGG01000002.1 Genbank gene 287573 288925 . + . ID=gene-CJ235_05105;Name=CJ235_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05105 PNGG01000002.1 Protein Homology CDS 287573 288925 . + 0 ID=cds-PMC19748.1;Parent=gene-CJ235_05105;Dbxref=NCBI_GP:PMC19748.1;Name=PMC19748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469339.1;locus_tag=CJ235_05105;product=aminomethyl-transferring glycine dehydrogenase;protein_id=PMC19748.1;transl_table=11 PNGG01000002.1 Genbank gene 288912 290390 . + . ID=gene-CJ235_05110;Name=CJ235_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05110 PNGG01000002.1 Protein Homology CDS 288912 290390 . + 0 ID=cds-PMC19749.1;Parent=gene-CJ235_05110;Dbxref=NCBI_GP:PMC19749.1;Name=PMC19749.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 1 to form the P protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303029.1;locus_tag=CJ235_05110;product=glycine dehydrogenase subunit 2;protein_id=PMC19749.1;transl_table=11 PNGG01000002.1 Genbank gene 290456 290842 . - . ID=gene-CJ235_05115;Name=CJ235_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05115 PNGG01000002.1 Protein Homology CDS 290456 290842 . - 0 ID=cds-PMC19750.1;Parent=gene-CJ235_05115;Dbxref=NCBI_GP:PMC19750.1;Name=PMC19750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764773.1;locus_tag=CJ235_05115;product=rhodanese-like domain-containing protein;protein_id=PMC19750.1;transl_table=11 PNGG01000002.1 Genbank gene 290987 291817 . + . ID=gene-CJ235_05120;Name=CJ235_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05120 PNGG01000002.1 Protein Homology CDS 290987 291817 . + 0 ID=cds-PMC19751.1;Parent=gene-CJ235_05120;Dbxref=NCBI_GP:PMC19751.1;Name=PMC19751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764772.1;locus_tag=CJ235_05120;product=lipoate--protein ligase family protein;protein_id=PMC19751.1;transl_table=11 PNGG01000002.1 Genbank gene 291872 292087 . - . ID=gene-CJ235_05125;Name=CJ235_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05125 PNGG01000002.1 Protein Homology CDS 291872 292087 . - 0 ID=cds-PMC19752.1;Parent=gene-CJ235_05125;Dbxref=NCBI_GP:PMC19752.1;Name=PMC19752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433847.1;locus_tag=CJ235_05125;product=hypothetical protein;protein_id=PMC19752.1;transl_table=11 PNGG01000002.1 Genbank gene 292132 292710 . - . ID=gene-CJ235_05130;Name=CJ235_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05130 PNGG01000002.1 Protein Homology CDS 292132 292710 . - 0 ID=cds-PMC19753.1;Parent=gene-CJ235_05130;Dbxref=NCBI_GP:PMC19753.1;Name=PMC19753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472475.1;locus_tag=CJ235_05130;product=hypothetical protein;protein_id=PMC19753.1;transl_table=11 PNGG01000002.1 Genbank gene 292819 293877 . + . ID=gene-CJ235_05135;Name=CJ235_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05135 PNGG01000002.1 Protein Homology CDS 292819 293877 . + 0 ID=cds-PMC19754.1;Parent=gene-CJ235_05135;Dbxref=NCBI_GP:PMC19754.1;Name=PMC19754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303034.1;locus_tag=CJ235_05135;product=aminopeptidase P family protein;protein_id=PMC19754.1;transl_table=11 PNGG01000002.1 Genbank gene 293905 294468 . + . ID=gene-CJ235_05140;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CJ235_05140 PNGG01000002.1 Protein Homology CDS 293905 294468 . + 0 ID=cds-PMC19755.1;Parent=gene-CJ235_05140;Dbxref=NCBI_GP:PMC19755.1;Name=PMC19755.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=CJ235_05140;product=elongation factor P;protein_id=PMC19755.1;transl_table=11 PNGG01000002.1 Genbank gene 294771 295244 . + . ID=gene-CJ235_05145;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CJ235_05145 PNGG01000002.1 Protein Homology CDS 294771 295244 . + 0 ID=cds-PMC19756.1;Parent=gene-CJ235_05145;Dbxref=NCBI_GP:PMC19756.1;Name=PMC19756.1;gbkey=CDS;gene=accB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433598.1;locus_tag=CJ235_05145;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=PMC19756.1;transl_table=11 PNGG01000002.1 Genbank gene 295246 296610 . + . ID=gene-CJ235_05150;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CJ235_05150 PNGG01000002.1 Protein Homology CDS 295246 296610 . + 0 ID=cds-PMC19757.1;Parent=gene-CJ235_05150;Dbxref=NCBI_GP:PMC19757.1;Name=PMC19757.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764762.1;locus_tag=CJ235_05150;product=pyruvate carboxylase;protein_id=PMC19757.1;transl_table=11 PNGG01000002.1 Genbank gene 296644 297036 . + . ID=gene-CJ235_05155;Name=CJ235_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05155 PNGG01000002.1 Protein Homology CDS 296644 297036 . + 0 ID=cds-PMC19758.1;Parent=gene-CJ235_05155;Dbxref=NCBI_GP:PMC19758.1;Name=PMC19758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500135.1;locus_tag=CJ235_05155;product=transcription antitermination factor NusB;protein_id=PMC19758.1;transl_table=11 PNGG01000002.1 Genbank gene 297051 298388 . + . ID=gene-CJ235_05160;Name=CJ235_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05160 PNGG01000002.1 Protein Homology CDS 297051 298388 . + 0 ID=cds-PMC19759.1;Parent=gene-CJ235_05160;Dbxref=NCBI_GP:PMC19759.1;Name=PMC19759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473182.1;locus_tag=CJ235_05160;product=exodeoxyribonuclease VII large subunit;protein_id=PMC19759.1;transl_table=11 PNGG01000002.1 Genbank gene 298381 298620 . + . ID=gene-CJ235_05165;Name=CJ235_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05165 PNGG01000002.1 Protein Homology CDS 298381 298620 . + 0 ID=cds-PMC19995.1;Parent=gene-CJ235_05165;Dbxref=NCBI_GP:PMC19995.1;Name=PMC19995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473176.1;locus_tag=CJ235_05165;product=exodeoxyribonuclease VII small subunit;protein_id=PMC19995.1;transl_table=11 PNGG01000002.1 Genbank gene 298601 299479 . + . ID=gene-CJ235_05170;Name=CJ235_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05170 PNGG01000002.1 Protein Homology CDS 298601 299479 . + 0 ID=cds-PMC19760.1;Parent=gene-CJ235_05170;Dbxref=NCBI_GP:PMC19760.1;Name=PMC19760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473169.1;locus_tag=CJ235_05170;product=geranyl transferase;protein_id=PMC19760.1;transl_table=11 PNGG01000002.1 Genbank gene 299824 300276 . + . ID=gene-CJ235_05175;Name=CJ235_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05175 PNGG01000002.1 Protein Homology CDS 299824 300276 . + 0 ID=cds-PMC19761.1;Parent=gene-CJ235_05175;Dbxref=NCBI_GP:PMC19761.1;Name=PMC19761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468379.1;locus_tag=CJ235_05175;product=transcriptional regulator ArgR;protein_id=PMC19761.1;transl_table=11 PNGG01000002.1 Genbank gene 300297 301976 . + . ID=gene-CJ235_05180;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CJ235_05180 PNGG01000002.1 Protein Homology CDS 300297 301976 . + 0 ID=cds-PMC19762.1;Parent=gene-CJ235_05180;Dbxref=NCBI_GP:PMC19762.1;Name=PMC19762.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473171.1;locus_tag=CJ235_05180;product=DNA repair protein RecN;protein_id=PMC19762.1;transl_table=11 PNGG01000002.1 Genbank gene 302198 303622 . + . ID=gene-CJ235_05185;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CJ235_05185 PNGG01000002.1 Protein Homology CDS 302198 303622 . + 0 ID=cds-PMC19763.1;Parent=gene-CJ235_05185;Dbxref=NCBI_GP:PMC19763.1;Name=PMC19763.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473174.1;locus_tag=CJ235_05185;product=dihydrolipoyl dehydrogenase;protein_id=PMC19763.1;transl_table=11 PNGG01000002.1 Genbank gene 303638 304633 . + . ID=gene-CJ235_05190;Name=CJ235_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05190 PNGG01000002.1 Protein Homology CDS 303638 304633 . + 0 ID=cds-PMC19764.1;Parent=gene-CJ235_05190;Dbxref=NCBI_GP:PMC19764.1;Name=PMC19764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473180.1;locus_tag=CJ235_05190;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=PMC19764.1;transl_table=11 PNGG01000002.1 Genbank gene 304630 305613 . + . ID=gene-CJ235_05195;Name=CJ235_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05195 PNGG01000002.1 Protein Homology CDS 304630 305613 . + 0 ID=cds-PMC19765.1;Parent=gene-CJ235_05195;Dbxref=NCBI_GP:PMC19765.1;Name=PMC19765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468374.1;locus_tag=CJ235_05195;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=PMC19765.1;transl_table=11 PNGG01000002.1 Genbank gene 305626 306939 . + . ID=gene-CJ235_05200;Name=CJ235_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05200 PNGG01000002.1 Protein Homology CDS 305626 306939 . + 0 ID=cds-PMC19766.1;Parent=gene-CJ235_05200;Dbxref=NCBI_GP:PMC19766.1;Name=PMC19766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473159.1;locus_tag=CJ235_05200;product=2-oxo acid dehydrogenase subunit E2;protein_id=PMC19766.1;transl_table=11 PNGG01000002.1 Genbank gene 307016 307453 . + . ID=gene-CJ235_05205;Name=CJ235_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05205 PNGG01000002.1 Protein Homology CDS 307016 307453 . + 0 ID=cds-PMC19767.1;Parent=gene-CJ235_05205;Dbxref=NCBI_GP:PMC19767.1;Name=PMC19767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433599.1;locus_tag=CJ235_05205;product=BrxA/BrxB family bacilliredoxin;protein_id=PMC19767.1;transl_table=11 PNGG01000002.1 Genbank gene 307466 308461 . + . ID=gene-CJ235_05210;Name=CJ235_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05210 PNGG01000002.1 Protein Homology CDS 307466 308461 . + 0 ID=cds-PMC19768.1;Parent=gene-CJ235_05210;Dbxref=NCBI_GP:PMC19768.1;Name=PMC19768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473155.1;locus_tag=CJ235_05210;product=aromatic acid exporter family protein;protein_id=PMC19768.1;transl_table=11 PNGG01000002.1 Genbank gene 308973 310097 . + . ID=gene-CJ235_05215;Name=CJ235_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05215 PNGG01000002.1 Protein Homology CDS 308973 310097 . + 0 ID=cds-PMC19769.1;Parent=gene-CJ235_05215;Dbxref=NCBI_GP:PMC19769.1;Name=PMC19769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478148.1;locus_tag=CJ235_05215;product=hypothetical protein;protein_id=PMC19769.1;transl_table=11 PNGG01000002.1 Genbank gene 310172 311581 . + . ID=gene-CJ235_05220;Name=CJ235_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05220 PNGG01000002.1 Protein Homology CDS 310172 311581 . + 0 ID=cds-PMC19770.1;Parent=gene-CJ235_05220;Dbxref=NCBI_GP:PMC19770.1;Name=PMC19770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764747.1;locus_tag=CJ235_05220;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=PMC19770.1;transl_table=11 PNGG01000002.1 Genbank gene 311842 312720 . - . ID=gene-CJ235_05225;Name=CJ235_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05225 PNGG01000002.1 Protein Homology CDS 311842 312720 . - 0 ID=cds-PMC19996.1;Parent=gene-CJ235_05225;Dbxref=NCBI_GP:PMC19996.1;Name=PMC19996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764745.1;locus_tag=CJ235_05225;product=AraC family transcriptional regulator;protein_id=PMC19996.1;transl_table=11 PNGG01000002.1 Genbank gene 313023 314507 . - . ID=gene-CJ235_05230;Name=CJ235_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05230 PNGG01000002.1 Protein Homology CDS 313023 314507 . - 0 ID=cds-PMC19771.1;Parent=gene-CJ235_05230;Dbxref=NCBI_GP:PMC19771.1;Name=PMC19771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500114.1;locus_tag=CJ235_05230;product=glucose-6-phosphate dehydrogenase;protein_id=PMC19771.1;transl_table=11 PNGG01000002.1 Genbank gene 314655 315575 . + . ID=gene-CJ235_05235;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CJ235_05235 PNGG01000002.1 Protein Homology CDS 314655 315575 . + 0 ID=cds-PMC19772.1;Parent=gene-CJ235_05235;Dbxref=NCBI_GP:PMC19772.1;Name=PMC19772.1;gbkey=CDS;gene=rnz;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176268.1;locus_tag=CJ235_05235;product=ribonuclease Z;protein_id=PMC19772.1;transl_table=11 PNGG01000002.1 Genbank gene 315738 316568 . - . ID=gene-CJ235_05240;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CJ235_05240 PNGG01000002.1 Protein Homology CDS 315738 316568 . - 0 ID=cds-PMC19773.1;Parent=gene-CJ235_05240;Dbxref=NCBI_GP:PMC19773.1;Name=PMC19773.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473154.1;locus_tag=CJ235_05240;product=pyrroline-5-carboxylate reductase;protein_id=PMC19773.1;transl_table=11 PNGG01000002.1 Genbank gene 316794 317564 . + . ID=gene-CJ235_05245;Name=CJ235_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05245 PNGG01000002.1 Protein Homology CDS 316794 317564 . + 0 ID=cds-PMC19774.1;Parent=gene-CJ235_05245;Dbxref=NCBI_GP:PMC19774.1;Name=PMC19774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473163.1;locus_tag=CJ235_05245;product=short-chain dehydrogenase;protein_id=PMC19774.1;transl_table=11 PNGG01000002.1 Genbank gene 317768 318682 . - . ID=gene-CJ235_05250;Name=CJ235_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05250 PNGG01000002.1 Protein Homology CDS 317768 318682 . - 0 ID=cds-PMC19775.1;Parent=gene-CJ235_05250;Dbxref=NCBI_GP:PMC19775.1;Name=PMC19775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764739.1;locus_tag=CJ235_05250;product=aldo/keto reductase;protein_id=PMC19775.1;transl_table=11 PNGG01000002.1 Genbank gene 318946 319488 . + . ID=gene-CJ235_05255;Name=CJ235_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05255 PNGG01000002.1 Protein Homology CDS 318946 319488 . + 0 ID=cds-PMC19776.1;Parent=gene-CJ235_05255;Dbxref=NCBI_GP:PMC19776.1;Name=PMC19776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473158.1;locus_tag=CJ235_05255;product=NUDIX hydrolase;protein_id=PMC19776.1;transl_table=11 PNGG01000002.1 Genbank gene 319601 320047 . + . ID=gene-CJ235_05260;Name=CJ235_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05260 PNGG01000002.1 Protein Homology CDS 319601 320047 . + 0 ID=cds-PMC19777.1;Parent=gene-CJ235_05260;Dbxref=NCBI_GP:PMC19777.1;Name=PMC19777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500107.1;locus_tag=CJ235_05260;product=transcriptional repressor;protein_id=PMC19777.1;transl_table=11 PNGG01000002.1 Genbank gene 320069 320956 . + . ID=gene-CJ235_05265;Name=CJ235_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05265 PNGG01000002.1 Protein Homology CDS 320069 320956 . + 0 ID=cds-PMC19778.1;Parent=gene-CJ235_05265;Dbxref=NCBI_GP:PMC19778.1;Name=PMC19778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764736.1;locus_tag=CJ235_05265;product=site-specific tyrosine recombinase XerD;protein_id=PMC19778.1;transl_table=11 PNGG01000002.1 Genbank gene 321128 321658 . - . ID=gene-CJ235_05270;Name=CJ235_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05270 PNGG01000002.1 Protein Homology CDS 321128 321658 . - 0 ID=cds-PMC19779.1;Parent=gene-CJ235_05270;Dbxref=NCBI_GP:PMC19779.1;Name=PMC19779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473168.1;locus_tag=CJ235_05270;product=DUF309 domain-containing protein;protein_id=PMC19779.1;transl_table=11 PNGG01000002.1 Genbank gene 321752 322489 . + . ID=gene-CJ235_05275;Name=CJ235_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05275 PNGG01000002.1 Protein Homology CDS 321752 322489 . + 0 ID=cds-PMC19780.1;Parent=gene-CJ235_05275;Dbxref=NCBI_GP:PMC19780.1;Name=PMC19780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473166.1;locus_tag=CJ235_05275;product=segregation/condensation protein A;protein_id=PMC19780.1;transl_table=11 PNGG01000002.1 Genbank gene 322476 323018 . + . ID=gene-CJ235_05280;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CJ235_05280 PNGG01000002.1 Protein Homology CDS 322476 323018 . + 0 ID=cds-PMC19781.1;Parent=gene-CJ235_05280;Dbxref=NCBI_GP:PMC19781.1;Name=PMC19781.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473165.1;locus_tag=CJ235_05280;product=SMC-Scp complex subunit ScpB;protein_id=PMC19781.1;transl_table=11 PNGG01000002.1 Genbank gene 323011 323751 . + . ID=gene-CJ235_05285;Name=CJ235_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05285 PNGG01000002.1 Protein Homology CDS 323011 323751 . + 0 ID=cds-PMC19782.1;Parent=gene-CJ235_05285;Dbxref=NCBI_GP:PMC19782.1;Name=PMC19782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500102.1;locus_tag=CJ235_05285;product=rRNA pseudouridine synthase;protein_id=PMC19782.1;transl_table=11 PNGG01000002.1 Genbank gene 323912 324637 . + . ID=gene-CJ235_05290;Name=CJ235_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05290 PNGG01000002.1 Protein Homology CDS 323912 324637 . + 0 ID=cds-PMC19783.1;Parent=gene-CJ235_05290;Dbxref=NCBI_GP:PMC19783.1;Name=PMC19783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764731.1;locus_tag=CJ235_05290;product=DNA-binding response regulator;protein_id=PMC19783.1;transl_table=11 PNGG01000002.1 Genbank gene 324621 326393 . + . ID=gene-CJ235_05295;Name=CJ235_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05295 PNGG01000002.1 Protein Homology CDS 324621 326393 . + 0 ID=cds-PMC19997.1;Parent=gene-CJ235_05295;Dbxref=NCBI_GP:PMC19997.1;Name=PMC19997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468353.1;locus_tag=CJ235_05295;product=HAMP domain-containing protein;protein_id=PMC19997.1;transl_table=11 PNGG01000002.1 cmsearch riboswitch 326611 326749 . + . ID=id-PNGG01000002.1:326611..326749;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000002.1 Genbank gene 326815 327360 . + . ID=gene-CJ235_05300;Name=CJ235_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05300 PNGG01000002.1 Protein Homology CDS 326815 327360 . + 0 ID=cds-PMC19784.1;Parent=gene-CJ235_05300;Dbxref=NCBI_GP:PMC19784.1;Name=PMC19784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511196.1;locus_tag=CJ235_05300;product=ECF transporter S component;protein_id=PMC19784.1;transl_table=11 PNGG01000002.1 Genbank gene 327521 327769 . - . ID=gene-CJ235_05305;Name=CJ235_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05305 PNGG01000002.1 Protein Homology CDS 327521 327769 . - 0 ID=cds-PMC19785.1;Parent=gene-CJ235_05305;Dbxref=NCBI_GP:PMC19785.1;Name=PMC19785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CJ235_05305;product=ferredoxin;protein_id=PMC19785.1;transl_table=11 PNGG01000002.1 Genbank gene 327969 328943 . + . ID=gene-CJ235_05310;Name=CJ235_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05310 PNGG01000002.1 Protein Homology CDS 327969 328943 . + 0 ID=cds-PMC19786.1;Parent=gene-CJ235_05310;Dbxref=NCBI_GP:PMC19786.1;Name=PMC19786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472150.1;locus_tag=CJ235_05310;product=hypothetical protein;protein_id=PMC19786.1;transl_table=11 PNGG01000002.1 Genbank gene 328924 330303 . + . ID=gene-CJ235_05315;Name=CJ235_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05315 PNGG01000002.1 Protein Homology CDS 328924 330303 . + 0 ID=cds-PMC19787.1;Parent=gene-CJ235_05315;Dbxref=NCBI_GP:PMC19787.1;Name=PMC19787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453293.1;locus_tag=CJ235_05315;product=ATP-dependent DNA helicase RecQ;protein_id=PMC19787.1;transl_table=11 PNGG01000002.1 Genbank gene 330442 331752 . + . ID=gene-CJ235_05320;Name=CJ235_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05320 PNGG01000002.1 Protein Homology CDS 330442 331752 . + 0 ID=cds-PMC19788.1;Parent=gene-CJ235_05320;Dbxref=NCBI_GP:PMC19788.1;Name=PMC19788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724522.1;locus_tag=CJ235_05320;product=LysM peptidoglycan-binding domain-containing protein;protein_id=PMC19788.1;transl_table=11 PNGG01000002.1 Genbank gene 332007 332993 . + . ID=gene-CJ235_05325;Name=CJ235_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05325 PNGG01000002.1 Protein Homology CDS 332007 332993 . + 0 ID=cds-PMC19789.1;Parent=gene-CJ235_05325;Dbxref=NCBI_GP:PMC19789.1;Name=PMC19789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764723.1;locus_tag=CJ235_05325;product=FAD-binding protein;protein_id=PMC19789.1;transl_table=11 PNGG01000002.1 Genbank gene 333134 334102 . - . ID=gene-CJ235_05330;Name=CJ235_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05330 PNGG01000002.1 Protein Homology CDS 333134 334102 . - 0 ID=cds-PMC19790.1;Parent=gene-CJ235_05330;Dbxref=NCBI_GP:PMC19790.1;Name=PMC19790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472144.1;locus_tag=CJ235_05330;product=L-asparaginase 2;protein_id=PMC19790.1;transl_table=11 PNGG01000002.1 Genbank gene 334181 334840 . + . ID=gene-CJ235_05335;Name=CJ235_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05335 PNGG01000002.1 Protein Homology CDS 334181 334840 . + 0 ID=cds-PMC19791.1;Parent=gene-CJ235_05335;Dbxref=NCBI_GP:PMC19791.1;Name=PMC19791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451130.1;locus_tag=CJ235_05335;product=(d)CMP kinase;protein_id=PMC19791.1;transl_table=11 PNGG01000002.1 Genbank gene 335092 336273 . + . ID=gene-CJ235_05340;Name=CJ235_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05340 PNGG01000002.1 Protein Homology CDS 335092 336273 . + 0 ID=cds-PMC19792.1;Parent=gene-CJ235_05340;Dbxref=NCBI_GP:PMC19792.1;Name=PMC19792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831057.1;locus_tag=CJ235_05340;product=30S ribosomal protein S1;protein_id=PMC19792.1;transl_table=11 PNGG01000002.1 Genbank gene 336486 337796 . + . ID=gene-CJ235_05345;Name=CJ235_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05345 PNGG01000002.1 Protein Homology CDS 336486 337796 . + 0 ID=cds-PMC19793.1;Parent=gene-CJ235_05345;Dbxref=NCBI_GP:PMC19793.1;Name=PMC19793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CJ235_05345;product=ribosome biogenesis GTPase Der;protein_id=PMC19793.1;transl_table=11 PNGG01000002.1 Genbank gene 337812 338810 . + . ID=gene-CJ235_05350;Name=CJ235_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05350 PNGG01000002.1 Protein Homology CDS 337812 338810 . + 0 ID=cds-PMC19794.1;Parent=gene-CJ235_05350;Dbxref=NCBI_GP:PMC19794.1;Name=PMC19794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480979.1;locus_tag=CJ235_05350;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=PMC19794.1;transl_table=11 PNGG01000002.1 Genbank gene 338980 339252 . + . ID=gene-CJ235_05355;Name=CJ235_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05355 PNGG01000002.1 Protein Homology CDS 338980 339252 . + 0 ID=cds-PMC19795.1;Parent=gene-CJ235_05355;Dbxref=NCBI_GP:PMC19795.1;Name=PMC19795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CJ235_05355;product=HU family DNA-binding protein;protein_id=PMC19795.1;transl_table=11 PNGG01000002.1 Genbank gene 339837 340394 . + . ID=gene-CJ235_05360;Name=CJ235_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05360 PNGG01000002.1 Protein Homology CDS 339837 340394 . + 0 ID=cds-PMC19796.1;Parent=gene-CJ235_05360;Dbxref=NCBI_GP:PMC19796.1;Name=PMC19796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472162.1;locus_tag=CJ235_05360;product=heptaprenyl pyrophosphate synthase subunit A;protein_id=PMC19796.1;transl_table=11 PNGG01000002.1 Genbank gene 340412 341113 . + . ID=gene-CJ235_05365;Name=CJ235_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05365 PNGG01000002.1 Protein Homology CDS 340412 341113 . + 0 ID=cds-PMC19797.1;Parent=gene-CJ235_05365;Dbxref=NCBI_GP:PMC19797.1;Name=PMC19797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176291.1;locus_tag=CJ235_05365;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=PMC19797.1;transl_table=11 PNGG01000002.1 Genbank gene 341140 342093 . + . ID=gene-CJ235_05370;Name=CJ235_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05370 PNGG01000002.1 Protein Homology CDS 341140 342093 . + 0 ID=cds-PMC19798.1;Parent=gene-CJ235_05370;Dbxref=NCBI_GP:PMC19798.1;Name=PMC19798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472166.1;locus_tag=CJ235_05370;product=heptaprenyl diphosphate synthase;protein_id=PMC19798.1;transl_table=11 PNGG01000002.1 Genbank gene 342185 342634 . + . ID=gene-CJ235_05375;Name=CJ235_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05375 PNGG01000002.1 Protein Homology CDS 342185 342634 . + 0 ID=cds-PMC19799.1;Parent=gene-CJ235_05375;Dbxref=NCBI_GP:PMC19799.1;Name=PMC19799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507569.1;locus_tag=CJ235_05375;product=nucleoside-diphosphate kinase;protein_id=PMC19799.1;transl_table=11 PNGG01000002.1 Genbank gene 342871 344037 . + . ID=gene-CJ235_05380;Name=CJ235_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05380 PNGG01000002.1 Protein Homology CDS 342871 344037 . + 0 ID=cds-PMC19800.1;Parent=gene-CJ235_05380;Dbxref=NCBI_GP:PMC19800.1;Name=PMC19800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269940.1;locus_tag=CJ235_05380;product=chorismate synthase;protein_id=PMC19800.1;transl_table=11 PNGG01000002.1 Genbank gene 344056 345123 . + . ID=gene-CJ235_05385;Name=CJ235_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05385 PNGG01000002.1 Protein Homology CDS 344056 345123 . + 0 ID=cds-PMC19801.1;Parent=gene-CJ235_05385;Dbxref=NCBI_GP:PMC19801.1;Name=PMC19801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472159.1;locus_tag=CJ235_05385;product=3-dehydroquinate synthase;protein_id=PMC19801.1;transl_table=11 PNGG01000002.1 Genbank gene 345133 346431 . + . ID=gene-CJ235_05390;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CJ235_05390 PNGG01000002.1 Protein Homology CDS 345133 346431 . + 0 ID=cds-PMC19802.1;Parent=gene-CJ235_05390;Dbxref=NCBI_GP:PMC19802.1;Name=PMC19802.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176296.1;locus_tag=CJ235_05390;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=PMC19802.1;transl_table=11 PNGG01000002.1 Genbank gene 346434 347678 . + . ID=gene-CJ235_05395;Name=CJ235_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05395 PNGG01000002.1 Protein Homology CDS 346434 347678 . + 0 ID=cds-PMC19803.1;Parent=gene-CJ235_05395;Dbxref=NCBI_GP:PMC19803.1;Name=PMC19803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472139.1;locus_tag=CJ235_05395;product=hypothetical protein;protein_id=PMC19803.1;transl_table=11 PNGG01000002.1 Genbank gene 347811 348368 . + . ID=gene-CJ235_05400;Name=CJ235_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05400 PNGG01000002.1 Protein Homology CDS 347811 348368 . + 0 ID=cds-PMC19804.1;Parent=gene-CJ235_05400;Dbxref=NCBI_GP:PMC19804.1;Name=PMC19804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472152.1;locus_tag=CJ235_05400;product=hypothetical protein;protein_id=PMC19804.1;transl_table=11 PNGG01000002.1 Genbank gene 348373 348987 . + . ID=gene-CJ235_05405;Name=CJ235_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05405 PNGG01000002.1 Protein Homology CDS 348373 348987 . + 0 ID=cds-PMC19805.1;Parent=gene-CJ235_05405;Dbxref=NCBI_GP:PMC19805.1;Name=PMC19805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472156.1;locus_tag=CJ235_05405;product=DUF1405 domain-containing protein;protein_id=PMC19805.1;transl_table=11 PNGG01000002.1 Genbank gene 349027 349710 . + . ID=gene-CJ235_05410;Name=CJ235_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05410 PNGG01000002.1 Protein Homology CDS 349027 349710 . + 0 ID=cds-PMC19998.1;Parent=gene-CJ235_05410;Dbxref=NCBI_GP:PMC19998.1;Name=PMC19998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499995.1;locus_tag=CJ235_05410;product=zinc metallopeptidase;protein_id=PMC19998.1;transl_table=11 PNGG01000002.1 Genbank gene 350002 350319 . + . ID=gene-CJ235_05415;Name=CJ235_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05415 PNGG01000002.1 Protein Homology CDS 350002 350319 . + 0 ID=cds-PMC19806.1;Parent=gene-CJ235_05415;Dbxref=NCBI_GP:PMC19806.1;Name=PMC19806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499994.1;locus_tag=CJ235_05415;product=nucleotide pyrophosphohydrolase;protein_id=PMC19806.1;transl_table=11 PNGG01000002.1 Genbank gene 350359 351492 . + . ID=gene-CJ235_05420;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CJ235_05420 PNGG01000002.1 Protein Homology CDS 350359 351492 . + 0 ID=cds-PMC19807.1;Parent=gene-CJ235_05420;Dbxref=NCBI_GP:PMC19807.1;Name=PMC19807.1;gbkey=CDS;gene=bshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507578.1;locus_tag=CJ235_05420;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=PMC19807.1;transl_table=11 PNGG01000002.1 Genbank gene 351485 352690 . + . ID=gene-CJ235_05425;Name=CJ235_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05425 PNGG01000002.1 Protein Homology CDS 351485 352690 . + 0 ID=cds-PMC19808.1;Parent=gene-CJ235_05425;Dbxref=NCBI_GP:PMC19808.1;Name=PMC19808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472171.1;locus_tag=CJ235_05425;product=CCA tRNA nucleotidyltransferase;protein_id=PMC19808.1;transl_table=11 PNGG01000002.1 Genbank gene 352674 353645 . + . ID=gene-CJ235_05430;Name=CJ235_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05430 PNGG01000002.1 Protein Homology CDS 352674 353645 . + 0 ID=cds-PMC19809.1;Parent=gene-CJ235_05430;Dbxref=NCBI_GP:PMC19809.1;Name=PMC19809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466619.1;locus_tag=CJ235_05430;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=PMC19809.1;transl_table=11 PNGG01000002.1 Genbank gene 353667 356354 . + . ID=gene-CJ235_05435;Name=CJ235_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05435 PNGG01000002.1 Protein Homology CDS 353667 356354 . + 0 ID=cds-PMC19810.1;Parent=gene-CJ235_05435;Dbxref=NCBI_GP:PMC19810.1;Name=PMC19810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472165.1;locus_tag=CJ235_05435;product=ATP-dependent helicase;protein_id=PMC19810.1;transl_table=11 PNGG01000002.1 Genbank gene 356399 357085 . + . ID=gene-CJ235_05440;Name=CJ235_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05440 PNGG01000002.1 Protein Homology CDS 356399 357085 . + 0 ID=cds-PMC19811.1;Parent=gene-CJ235_05440;Dbxref=NCBI_GP:PMC19811.1;Name=PMC19811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472154.1;locus_tag=CJ235_05440;product=DNA replication protein DnaD;protein_id=PMC19811.1;transl_table=11 PNGG01000002.1 Genbank gene 357075 357737 . + . ID=gene-CJ235_05445;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CJ235_05445 PNGG01000002.1 Protein Homology CDS 357075 357737 . + 0 ID=cds-PMC19812.1;Parent=gene-CJ235_05445;Dbxref=NCBI_GP:PMC19812.1;Name=PMC19812.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472141.1;locus_tag=CJ235_05445;product=endonuclease III;protein_id=PMC19812.1;transl_table=11 PNGG01000002.1 Genbank gene 357741 358076 . + . ID=gene-CJ235_05450;Name=CJ235_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05450 PNGG01000002.1 Protein Homology CDS 357741 358076 . + 0 ID=cds-PMC19813.1;Parent=gene-CJ235_05450;Dbxref=NCBI_GP:PMC19813.1;Name=PMC19813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472170.1;locus_tag=CJ235_05450;product=hypothetical protein;protein_id=PMC19813.1;transl_table=11 PNGG01000002.1 Genbank gene 358196 360484 . - . ID=gene-CJ235_05455;Name=CJ235_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05455 PNGG01000002.1 Protein Homology CDS 358196 360484 . - 0 ID=cds-PMC19814.1;Parent=gene-CJ235_05455;Dbxref=NCBI_GP:PMC19814.1;Name=PMC19814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472149.1;locus_tag=CJ235_05455;product=transglycosylase;protein_id=PMC19814.1;transl_table=11 PNGG01000002.1 Genbank gene 360481 361107 . - . ID=gene-CJ235_05460;Name=CJ235_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05460 PNGG01000002.1 Protein Homology CDS 360481 361107 . - 0 ID=cds-PMC19815.1;Parent=gene-CJ235_05460;Dbxref=NCBI_GP:PMC19815.1;Name=PMC19815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764692.1;locus_tag=CJ235_05460;product=Holliday junction resolvase RecU;protein_id=PMC19815.1;transl_table=11 PNGG01000002.1 Genbank gene 361423 361767 . + . ID=gene-CJ235_05465;Name=CJ235_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05465 PNGG01000002.1 Protein Homology CDS 361423 361767 . + 0 ID=cds-PMC19816.1;Parent=gene-CJ235_05465;Dbxref=NCBI_GP:PMC19816.1;Name=PMC19816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472158.1;locus_tag=CJ235_05465;product=DUF1798 domain-containing protein;protein_id=PMC19816.1;transl_table=11 PNGG01000002.1 Genbank gene 361760 362320 . + . ID=gene-CJ235_05470;Name=CJ235_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05470 PNGG01000002.1 Protein Homology CDS 361760 362320 . + 0 ID=cds-PMC19817.1;Parent=gene-CJ235_05470;Dbxref=NCBI_GP:PMC19817.1;Name=PMC19817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472137.1;locus_tag=CJ235_05470;product=DUF1273 domain-containing protein;protein_id=PMC19817.1;transl_table=11 PNGG01000002.1 Genbank gene 362635 362970 . + . ID=gene-CJ235_05475;Name=CJ235_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05475 PNGG01000002.1 Protein Homology CDS 362635 362970 . + 0 ID=cds-PMC19818.1;Parent=gene-CJ235_05475;Dbxref=NCBI_GP:PMC19818.1;Name=PMC19818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CJ235_05475;product=cell division regulator GpsB;protein_id=PMC19818.1;transl_table=11 PNGG01000002.1 Genbank gene 363125 363501 . + . ID=gene-CJ235_05480;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CJ235_05480 PNGG01000002.1 cmsearch RNase_P_RNA 363125 363501 . + . ID=rna-CJ235_05480;Parent=gene-CJ235_05480;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_05480;product=RNase P RNA component class B PNGG01000002.1 cmsearch exon 363125 363501 . + . ID=exon-CJ235_05480-1;Parent=rna-CJ235_05480;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_05480;product=RNase P RNA component class B PNGG01000002.1 Genbank gene 363637 364761 . + . ID=gene-CJ235_05485;Name=CJ235_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05485 PNGG01000002.1 Protein Homology CDS 363637 364761 . + 0 ID=cds-PMC19819.1;Parent=gene-CJ235_05485;Dbxref=NCBI_GP:PMC19819.1;Name=PMC19819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507591.1;locus_tag=CJ235_05485;product=class I SAM-dependent RNA methyltransferase;protein_id=PMC19819.1;transl_table=11 PNGG01000002.1 Genbank gene 364782 365687 . + . ID=gene-CJ235_05490;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CJ235_05490 PNGG01000002.1 Protein Homology CDS 364782 365687 . + 0 ID=cds-PMC19820.1;Parent=gene-CJ235_05490;Dbxref=NCBI_GP:PMC19820.1;Name=PMC19820.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469254.1;locus_tag=CJ235_05490;product=EamA family transporter RarD;protein_id=PMC19820.1;transl_table=11 PNGG01000002.1 Genbank gene 365986 366624 . + . ID=gene-CJ235_05495;Name=CJ235_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05495 PNGG01000002.1 Protein Homology CDS 365986 366624 . + 0 ID=cds-PMC19821.1;Parent=gene-CJ235_05495;Dbxref=NCBI_GP:PMC19821.1;Name=PMC19821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831317.1;locus_tag=CJ235_05495;product=NAD-dependent dehydratase;protein_id=PMC19821.1;transl_table=11 PNGG01000002.1 Genbank gene 366829 370284 . + . ID=gene-CJ235_05500;Name=CJ235_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05500 PNGG01000002.1 Protein Homology CDS 366829 370284 . + 0 ID=cds-PMC19822.1;Parent=gene-CJ235_05500;Dbxref=NCBI_GP:PMC19822.1;Name=PMC19822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472169.1;locus_tag=CJ235_05500;product=GTP-binding protein;protein_id=PMC19822.1;transl_table=11 PNGG01000002.1 Genbank gene 370301 371182 . + . ID=gene-CJ235_05505;Name=CJ235_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05505 PNGG01000002.1 Protein Homology CDS 370301 371182 . + 0 ID=cds-PMC19823.1;Parent=gene-CJ235_05505;Dbxref=NCBI_GP:PMC19823.1;Name=PMC19823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472173.1;locus_tag=CJ235_05505;product=5'-3' exonuclease;protein_id=PMC19823.1;transl_table=11 PNGG01000002.1 Genbank gene 371303 371710 . - . ID=gene-CJ235_05510;Name=CJ235_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05510 PNGG01000002.1 Protein Homology CDS 371303 371710 . - 0 ID=cds-PMC19824.1;Parent=gene-CJ235_05510;Dbxref=NCBI_GP:PMC19824.1;Name=PMC19824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472160.1;locus_tag=CJ235_05510;product=ribonuclease H;protein_id=PMC19824.1;transl_table=11 PNGG01000002.1 Genbank gene 371873 372433 . + . ID=gene-CJ235_05515;Name=CJ235_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05515 PNGG01000002.1 Protein Homology CDS 371873 372433 . + 0 ID=cds-PMC19825.1;Parent=gene-CJ235_05515;Dbxref=NCBI_GP:PMC19825.1;Name=PMC19825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06821.11;locus_tag=CJ235_05515;product=esterase;protein_id=PMC19825.1;transl_table=11 PNGG01000002.1 Genbank gene 372528 373235 . - . ID=gene-CJ235_05520;Name=CJ235_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05520 PNGG01000002.1 Protein Homology CDS 372528 373235 . - 0 ID=cds-PMC19826.1;Parent=gene-CJ235_05520;Dbxref=NCBI_GP:PMC19826.1;Name=PMC19826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472175.1;locus_tag=CJ235_05520;product=hypothetical protein;protein_id=PMC19826.1;transl_table=11 PNGG01000002.1 Genbank gene 374375 374512 . + . ID=gene-CJ235_05525;Name=CJ235_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05525 PNGG01000002.1 Protein Homology CDS 374375 374512 . + 0 ID=cds-PMC19999.1;Parent=gene-CJ235_05525;Dbxref=NCBI_GP:PMC19999.1;Name=PMC19999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449911.1;locus_tag=CJ235_05525;product=zinc-finger domain-containing protein;protein_id=PMC19999.1;transl_table=11 PNGG01000002.1 Genbank gene 374525 375640 . + . ID=gene-CJ235_05530;Name=CJ235_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05530 PNGG01000002.1 Protein Homology CDS 374525 375640 . + 0 ID=cds-PMC19827.1;Parent=gene-CJ235_05530;Dbxref=NCBI_GP:PMC19827.1;Name=PMC19827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383794.1;locus_tag=CJ235_05530;product=virulence factor;protein_id=PMC19827.1;transl_table=11 PNGG01000002.1 Genbank gene 375658 376092 . + . ID=gene-CJ235_05535;Name=CJ235_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05535 PNGG01000002.1 Protein Homology CDS 375658 376092 . + 0 ID=cds-PMC19828.1;Parent=gene-CJ235_05535;Dbxref=NCBI_GP:PMC19828.1;Name=PMC19828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459166.1;locus_tag=CJ235_05535;product=BrxA/BrxB family bacilliredoxin;protein_id=PMC19828.1;transl_table=11 PNGG01000002.1 Genbank gene 376324 377280 . + . ID=gene-CJ235_05540;Name=CJ235_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05540 PNGG01000002.1 Protein Homology CDS 376324 377280 . + 0 ID=cds-PMC19829.1;Parent=gene-CJ235_05540;Dbxref=NCBI_GP:PMC19829.1;Name=PMC19829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=CJ235_05540;product=thymidylate synthase;protein_id=PMC19829.1;transl_table=11 PNGG01000002.1 Genbank gene 377318 377803 . + . ID=gene-CJ235_05545;Name=CJ235_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05545 PNGG01000002.1 Protein Homology CDS 377318 377803 . + 0 ID=cds-PMC19830.1;Parent=gene-CJ235_05545;Dbxref=NCBI_GP:PMC19830.1;Name=PMC19830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470989.1;locus_tag=CJ235_05545;product=dihydrofolate reductase;protein_id=PMC19830.1;transl_table=11 PNGG01000002.1 Genbank gene 377818 378663 . + . ID=gene-CJ235_05550;Name=CJ235_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05550 PNGG01000002.1 Protein Homology CDS 377818 378663 . + 0 ID=cds-PMC19831.1;Parent=gene-CJ235_05550;Dbxref=NCBI_GP:PMC19831.1;Name=PMC19831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471001.1;locus_tag=CJ235_05550;product=DegV family protein;protein_id=PMC19831.1;transl_table=11 PNGG01000002.1 Genbank gene 378687 379214 . + . ID=gene-CJ235_05555;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CJ235_05555 PNGG01000002.1 Protein Homology CDS 378687 379214 . + 0 ID=cds-PMC19832.1;Parent=gene-CJ235_05555;Dbxref=NCBI_GP:PMC19832.1;Name=PMC19832.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724474.1;locus_tag=CJ235_05555;product=peptide-methionine (S)-S-oxide reductase;protein_id=PMC19832.1;transl_table=11 PNGG01000002.1 Genbank gene 379207 379635 . + . ID=gene-CJ235_05560;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CJ235_05560 PNGG01000002.1 Protein Homology CDS 379207 379635 . + 0 ID=cds-PMC19833.1;Parent=gene-CJ235_05560;Dbxref=NCBI_GP:PMC19833.1;Name=PMC19833.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764671.1;locus_tag=CJ235_05560;product=peptide-methionine (R)-S-oxide reductase;protein_id=PMC19833.1;transl_table=11 PNGG01000002.1 Genbank gene 379649 380149 . + . ID=gene-CJ235_05565;Name=CJ235_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05565 PNGG01000002.1 Protein Homology CDS 379649 380149 . + 0 ID=cds-PMC19834.1;Parent=gene-CJ235_05565;Dbxref=NCBI_GP:PMC19834.1;Name=PMC19834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499955.1;locus_tag=CJ235_05565;product=PTS glucose transporter subunit IIA;protein_id=PMC19834.1;transl_table=11 PNGG01000002.1 Genbank gene 380149 380370 . + . ID=gene-CJ235_05570;Name=CJ235_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05570 PNGG01000002.1 Protein Homology CDS 380149 380370 . + 0 ID=cds-PMC19835.1;Parent=gene-CJ235_05570;Dbxref=NCBI_GP:PMC19835.1;Name=PMC19835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483292.1;locus_tag=CJ235_05570;product=YozE family protein;protein_id=PMC19835.1;transl_table=11 PNGG01000002.1 Genbank gene 380707 382170 . + . ID=gene-CJ235_05575;Name=CJ235_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05575 PNGG01000002.1 Protein Homology CDS 380707 382170 . + 0 ID=cds-PMC19836.1;Parent=gene-CJ235_05575;Dbxref=NCBI_GP:PMC19836.1;Name=PMC19836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470986.1;locus_tag=CJ235_05575;product=PDZ domain-containing protein;protein_id=PMC19836.1;transl_table=11 PNGG01000002.1 Genbank gene 382189 382698 . + . ID=gene-CJ235_05580;Name=CJ235_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05580 PNGG01000002.1 Protein Homology CDS 382189 382698 . + 0 ID=cds-PMC19837.1;Parent=gene-CJ235_05580;Dbxref=NCBI_GP:PMC19837.1;Name=PMC19837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483294.1;locus_tag=CJ235_05580;product=N-acetyltransferase;protein_id=PMC19837.1;transl_table=11 PNGG01000002.1 Genbank gene 382709 383782 . + . ID=gene-CJ235_05585;Name=CJ235_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05585 PNGG01000002.1 Protein Homology CDS 382709 383782 . + 0 ID=cds-PMC19838.1;Parent=gene-CJ235_05585;Dbxref=NCBI_GP:PMC19838.1;Name=PMC19838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471004.1;locus_tag=CJ235_05585;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=PMC19838.1;transl_table=11 PNGG01000002.1 Genbank gene 383801 384415 . + . ID=gene-CJ235_05590;Name=CJ235_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05590 PNGG01000002.1 Protein Homology CDS 383801 384415 . + 0 ID=cds-PMC19839.1;Parent=gene-CJ235_05590;Dbxref=NCBI_GP:PMC19839.1;Name=PMC19839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471002.1;locus_tag=CJ235_05590;product=phosphatase PAP2 family protein;protein_id=PMC19839.1;transl_table=11 PNGG01000002.1 Genbank pseudogene 384768 385041 . + . ID=gene-CJ235_05595;Name=CJ235_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_05595;pseudo=true PNGG01000002.1 Protein Homology CDS 384768 385041 . + 0 ID=cds-CJ235_05595;Parent=gene-CJ235_05595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184332.1;locus_tag=CJ235_05595;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000002.1 Genbank gene 385059 385721 . + . ID=gene-CJ235_05600;Name=CJ235_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05600 PNGG01000002.1 Protein Homology CDS 385059 385721 . + 0 ID=cds-PMC19840.1;Parent=gene-CJ235_05600;Dbxref=NCBI_GP:PMC19840.1;Name=PMC19840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483297.1;locus_tag=CJ235_05600;product=DNA-binding response regulator;protein_id=PMC19840.1;transl_table=11 PNGG01000002.1 Genbank gene 385718 387073 . + . ID=gene-CJ235_05605;Name=CJ235_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05605 PNGG01000002.1 Protein Homology CDS 385718 387073 . + 0 ID=cds-PMC19841.1;Parent=gene-CJ235_05605;Dbxref=NCBI_GP:PMC19841.1;Name=PMC19841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470998.1;locus_tag=CJ235_05605;product=sensor histidine kinase;protein_id=PMC19841.1;transl_table=11 PNGG01000002.1 Genbank gene 387308 390109 . + . ID=gene-CJ235_05610;Name=CJ235_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05610 PNGG01000002.1 Protein Homology CDS 387308 390109 . + 0 ID=cds-PMC19842.1;Parent=gene-CJ235_05610;Dbxref=NCBI_GP:PMC19842.1;Name=PMC19842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471007.1;locus_tag=CJ235_05610;product=2-oxoglutarate dehydrogenase E1 component;protein_id=PMC19842.1;transl_table=11 PNGG01000002.1 Genbank gene 390123 391385 . + . ID=gene-CJ235_05615;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CJ235_05615 PNGG01000002.1 Protein Homology CDS 390123 391385 . + 0 ID=cds-PMC19843.1;Parent=gene-CJ235_05615;Dbxref=NCBI_GP:PMC19843.1;Name=PMC19843.1;gbkey=CDS;gene=sucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764651.1;locus_tag=CJ235_05615;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=PMC19843.1;transl_table=11 PNGG01000002.1 Genbank gene 391731 391934 . - . ID=gene-CJ235_05620;Name=CJ235_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05620 PNGG01000002.1 Protein Homology CDS 391731 391934 . - 0 ID=cds-PMC19844.1;Parent=gene-CJ235_05620;Dbxref=NCBI_GP:PMC19844.1;Name=PMC19844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507627.1;locus_tag=CJ235_05620;product=Mid2-like cell wall stress sensor domain protein;protein_id=PMC19844.1;transl_table=11 PNGG01000002.1 Genbank gene 392123 392932 . + . ID=gene-CJ235_05625;Name=CJ235_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05625 PNGG01000002.1 Protein Homology CDS 392123 392932 . + 0 ID=cds-PMC19845.1;Parent=gene-CJ235_05625;Dbxref=NCBI_GP:PMC19845.1;Name=PMC19845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470993.1;locus_tag=CJ235_05625;product=lactoylglutathione lyase;protein_id=PMC19845.1;transl_table=11 PNGG01000002.1 Genbank gene 392963 393166 . + . ID=gene-CJ235_05630;Name=CJ235_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05630 PNGG01000002.1 Protein Homology CDS 392963 393166 . + 0 ID=cds-PMC19846.1;Parent=gene-CJ235_05630;Dbxref=NCBI_GP:PMC19846.1;Name=PMC19846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466853.1;locus_tag=CJ235_05630;product=hypothetical protein;protein_id=PMC19846.1;transl_table=11 PNGG01000002.1 Genbank gene 393263 394054 . + . ID=gene-CJ235_05635;Name=CJ235_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05635 PNGG01000002.1 Protein Homology CDS 393263 394054 . + 0 ID=cds-PMC19847.1;Parent=gene-CJ235_05635;Dbxref=NCBI_GP:PMC19847.1;Name=PMC19847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275794.1;locus_tag=CJ235_05635;product=MoxR family ATPase;protein_id=PMC19847.1;transl_table=11 PNGG01000002.1 Genbank gene 394067 395953 . + . ID=gene-CJ235_05640;Name=CJ235_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05640 PNGG01000002.1 Protein Homology CDS 394067 395953 . + 0 ID=cds-PMC19848.1;Parent=gene-CJ235_05640;Dbxref=NCBI_GP:PMC19848.1;Name=PMC19848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471696.1;locus_tag=CJ235_05640;product=VWA domain-containing protein;protein_id=PMC19848.1;transl_table=11 PNGG01000002.1 Genbank gene 396082 397425 . + . ID=gene-CJ235_05645;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CJ235_05645 PNGG01000002.1 Protein Homology CDS 396082 397425 . + 0 ID=cds-PMC19849.1;Parent=gene-CJ235_05645;Dbxref=NCBI_GP:PMC19849.1;Name=PMC19849.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CJ235_05645;product=branched-chain amino acid transport system II carrier protein;protein_id=PMC19849.1;transl_table=11 PNGG01000002.1 Genbank gene 397656 398798 . - . ID=gene-CJ235_05650;Name=CJ235_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05650 PNGG01000002.1 Protein Homology CDS 397656 398798 . - 0 ID=cds-PMC19850.1;Parent=gene-CJ235_05650;Dbxref=NCBI_GP:PMC19850.1;Name=PMC19850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471693.1;locus_tag=CJ235_05650;product=toxic anion resistance protein;protein_id=PMC19850.1;transl_table=11 PNGG01000002.1 Genbank gene 398826 399449 . - . ID=gene-CJ235_05655;Name=CJ235_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05655 PNGG01000002.1 Protein Homology CDS 398826 399449 . - 0 ID=cds-PMC19851.1;Parent=gene-CJ235_05655;Dbxref=NCBI_GP:PMC19851.1;Name=PMC19851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275799.1;locus_tag=CJ235_05655;product=5-bromo-4-chloroindolyl phosphate hydrolase;protein_id=PMC19851.1;transl_table=11 PNGG01000002.1 Genbank gene 399463 399732 . - . ID=gene-CJ235_05660;Name=CJ235_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05660 PNGG01000002.1 Protein Homology CDS 399463 399732 . - 0 ID=cds-PMC19852.1;Parent=gene-CJ235_05660;Dbxref=NCBI_GP:PMC19852.1;Name=PMC19852.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471699.1;locus_tag=CJ235_05660;product=acylphosphatase;protein_id=PMC19852.1;transl_table=11 PNGG01000002.1 Genbank gene 400012 400320 . + . ID=gene-CJ235_05665;Name=CJ235_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05665 PNGG01000002.1 Protein Homology CDS 400012 400320 . + 0 ID=cds-PMC19853.1;Parent=gene-CJ235_05665;Dbxref=NCBI_GP:PMC19853.1;Name=PMC19853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507638.1;locus_tag=CJ235_05665;product=DUF1033 domain-containing protein;protein_id=PMC19853.1;transl_table=11 PNGG01000002.1 Genbank gene 400501 400701 . + . ID=gene-CJ235_05670;Name=CJ235_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05670 PNGG01000002.1 Protein Homology CDS 400501 400701 . + 0 ID=cds-PMC19854.1;Parent=gene-CJ235_05670;Dbxref=NCBI_GP:PMC19854.1;Name=PMC19854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CJ235_05670;product=cold-shock protein CspA;protein_id=PMC19854.1;transl_table=11 PNGG01000002.1 Genbank gene 400771 402036 . - . ID=gene-CJ235_05675;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CJ235_05675 PNGG01000002.1 Protein Homology CDS 400771 402036 . - 0 ID=cds-PMC19855.1;Parent=gene-CJ235_05675;Dbxref=NCBI_GP:PMC19855.1;Name=PMC19855.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764635.1;locus_tag=CJ235_05675;product=diaminopimelate decarboxylase;protein_id=PMC19855.1;transl_table=11 PNGG01000002.1 Genbank gene 402040 403113 . - . ID=gene-CJ235_05680;Name=CJ235_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05680 PNGG01000002.1 Protein Homology CDS 402040 403113 . - 0 ID=cds-PMC19856.1;Parent=gene-CJ235_05680;Dbxref=NCBI_GP:PMC19856.1;Name=PMC19856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472015.1;locus_tag=CJ235_05680;product=alanine racemase;protein_id=PMC19856.1;transl_table=11 PNGG01000002.1 Genbank gene 403110 404267 . - . ID=gene-CJ235_05685;Name=CJ235_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05685 PNGG01000002.1 Protein Homology CDS 403110 404267 . - 0 ID=cds-PMC19857.1;Parent=gene-CJ235_05685;Dbxref=NCBI_GP:PMC19857.1;Name=PMC19857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507642.1;locus_tag=CJ235_05685;product=hydrolase;protein_id=PMC19857.1;transl_table=11 PNGG01000002.1 Genbank gene 404543 405262 . - . ID=gene-CJ235_05690;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CJ235_05690 PNGG01000002.1 Protein Homology CDS 404543 405262 . - 0 ID=cds-PMC19858.1;Parent=gene-CJ235_05690;Dbxref=NCBI_GP:PMC19858.1;Name=PMC19858.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249833.1;locus_tag=CJ235_05690;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=PMC19858.1;transl_table=11 PNGG01000002.1 Genbank gene 405280 406002 . - . ID=gene-CJ235_05695;Name=CJ235_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05695 PNGG01000002.1 Protein Homology CDS 405280 406002 . - 0 ID=cds-PMC19859.1;Parent=gene-CJ235_05695;Dbxref=NCBI_GP:PMC19859.1;Name=PMC19859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468781.1;locus_tag=CJ235_05695;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=PMC19859.1;transl_table=11 PNGG01000002.1 Genbank gene 406002 406886 . - . ID=gene-CJ235_05700;Name=CJ235_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05700 PNGG01000002.1 Protein Homology CDS 406002 406886 . - 0 ID=cds-PMC19860.1;Parent=gene-CJ235_05700;Dbxref=NCBI_GP:PMC19860.1;Name=PMC19860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472036.1;locus_tag=CJ235_05700;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=PMC19860.1;transl_table=11 PNGG01000002.1 Genbank gene 406930 407913 . - . ID=gene-CJ235_05705;Name=CJ235_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05705 PNGG01000002.1 Protein Homology CDS 406930 407913 . - 0 ID=cds-PMC19861.1;Parent=gene-CJ235_05705;Dbxref=NCBI_GP:PMC19861.1;Name=PMC19861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499922.1;locus_tag=CJ235_05705;product=aspartate-semialdehyde dehydrogenase;protein_id=PMC19861.1;transl_table=11 PNGG01000002.1 Genbank gene 407938 409140 . - . ID=gene-CJ235_05710;Name=CJ235_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05710 PNGG01000002.1 Protein Homology CDS 407938 409140 . - 0 ID=cds-PMC19862.1;Parent=gene-CJ235_05710;Dbxref=NCBI_GP:PMC19862.1;Name=PMC19862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507647.1;locus_tag=CJ235_05710;product=aspartate kinase;protein_id=PMC19862.1;transl_table=11 PNGG01000002.1 Genbank gene 410132 411742 . - . ID=gene-CJ235_05715;Name=CJ235_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05715 PNGG01000002.1 Protein Homology CDS 410132 411742 . - 0 ID=cds-PMC19863.1;Parent=gene-CJ235_05715;Dbxref=NCBI_GP:PMC19863.1;Name=PMC19863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764627.1;locus_tag=CJ235_05715;product=ABC transporter ATP-binding protein;protein_id=PMC19863.1;transl_table=11 PNGG01000002.1 Genbank gene 411895 412806 . + . ID=gene-CJ235_05720;Name=CJ235_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05720 PNGG01000002.1 Protein Homology CDS 411895 412806 . + 0 ID=cds-PMC19864.1;Parent=gene-CJ235_05720;Dbxref=NCBI_GP:PMC19864.1;Name=PMC19864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636974.1;locus_tag=CJ235_05720;product=RNA-binding protein;protein_id=PMC19864.1;transl_table=11 PNGG01000002.1 Genbank gene 413236 414210 . + . ID=gene-CJ235_05725;Name=CJ235_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05725 PNGG01000002.1 Protein Homology CDS 413236 414210 . + 0 ID=cds-PMC19865.1;Parent=gene-CJ235_05725;Dbxref=NCBI_GP:PMC19865.1;Name=PMC19865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478203.1;locus_tag=CJ235_05725;product=thioredoxine reductase;protein_id=PMC19865.1;transl_table=11 PNGG01000002.1 Genbank gene 414367 415266 . + . ID=gene-CJ235_05730;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CJ235_05730 PNGG01000002.1 Protein Homology CDS 414367 415266 . + 0 ID=cds-PMC20000.1;Parent=gene-CJ235_05730;Dbxref=NCBI_GP:PMC20000.1;Name=PMC20000.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466848.1;locus_tag=CJ235_05730;product=phosphate ABC transporter permease subunit PstC;protein_id=PMC20000.1;transl_table=11 PNGG01000002.1 Genbank gene 415268 416185 . + . ID=gene-CJ235_05735;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CJ235_05735 PNGG01000002.1 Protein Homology CDS 415268 416185 . + 0 ID=cds-PMC19866.1;Parent=gene-CJ235_05735;Dbxref=NCBI_GP:PMC19866.1;Name=PMC19866.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459124.1;locus_tag=CJ235_05735;product=phosphate ABC transporter%2C permease protein PstA;protein_id=PMC19866.1;transl_table=11 PNGG01000002.1 Genbank gene 416198 417040 . + . ID=gene-CJ235_05740;Name=CJ235_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05740 PNGG01000002.1 Protein Homology CDS 416198 417040 . + 0 ID=cds-PMC19867.1;Parent=gene-CJ235_05740;Dbxref=NCBI_GP:PMC19867.1;Name=PMC19867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472033.1;locus_tag=CJ235_05740;product=phosphate ABC transporter ATP-binding protein;protein_id=PMC19867.1;transl_table=11 PNGG01000002.1 Genbank gene 417042 417680 . + . ID=gene-CJ235_05745;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CJ235_05745 PNGG01000002.1 Protein Homology CDS 417042 417680 . + 0 ID=cds-PMC19868.1;Parent=gene-CJ235_05745;Dbxref=NCBI_GP:PMC19868.1;Name=PMC19868.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449706.1;locus_tag=CJ235_05745;product=phosphate transport system regulatory protein PhoU;protein_id=PMC19868.1;transl_table=11 PNGG01000002.1 Genbank gene 417816 419621 . - . ID=gene-CJ235_05750;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CJ235_05750 PNGG01000002.1 Protein Homology CDS 417816 419621 . - 0 ID=cds-PMC19869.1;Parent=gene-CJ235_05750;Dbxref=NCBI_GP:PMC19869.1;Name=PMC19869.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472022.1;locus_tag=CJ235_05750;product=oligoendopeptidase F;protein_id=PMC19869.1;transl_table=11 PNGG01000002.1 Genbank pseudogene 419877 420176 . + . ID=gene-CJ235_05755;Name=CJ235_05755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_05755;pseudo=true PNGG01000002.1 Protein Homology CDS 419877 420176 . + 0 ID=cds-CJ235_05755;Parent=gene-CJ235_05755;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275820.1;locus_tag=CJ235_05755;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000002.1 Genbank gene 422233 423492 . - . ID=gene-CJ235_05760;Name=CJ235_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05760 PNGG01000002.1 Protein Homology CDS 422233 423492 . - 0 ID=cds-PMC19870.1;Parent=gene-CJ235_05760;Dbxref=NCBI_GP:PMC19870.1;Name=PMC19870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764613.1;locus_tag=CJ235_05760;product=aminoacyltransferase;protein_id=PMC19870.1;transl_table=11 PNGG01000002.1 Genbank gene 423518 424786 . - . ID=gene-CJ235_05765;Name=CJ235_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05765 PNGG01000002.1 Protein Homology CDS 423518 424786 . - 0 ID=cds-PMC19871.1;Parent=gene-CJ235_05765;Dbxref=NCBI_GP:PMC19871.1;Name=PMC19871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472047.1;locus_tag=CJ235_05765;product=aminoacyltransferase;protein_id=PMC19871.1;transl_table=11 PNGG01000002.1 Genbank gene 425177 425839 . - . ID=gene-CJ235_05770;Name=CJ235_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05770 PNGG01000002.1 Protein Homology CDS 425177 425839 . - 0 ID=cds-PMC19872.1;Parent=gene-CJ235_05770;Dbxref=NCBI_GP:PMC19872.1;Name=PMC19872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472050.1;locus_tag=CJ235_05770;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=PMC19872.1;transl_table=11 PNGG01000002.1 Genbank gene 425957 426685 . - . ID=gene-CJ235_05775;Name=CJ235_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05775 PNGG01000002.1 Protein Homology CDS 425957 426685 . - 0 ID=cds-PMC19873.1;Parent=gene-CJ235_05775;Dbxref=NCBI_GP:PMC19873.1;Name=PMC19873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472023.1;locus_tag=CJ235_05775;product=tryptophan synthase subunit alpha;protein_id=PMC19873.1;transl_table=11 PNGG01000002.1 Genbank gene 426678 427907 . - . ID=gene-CJ235_05780;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CJ235_05780 PNGG01000002.1 Protein Homology CDS 426678 427907 . - 0 ID=cds-PMC19874.1;Parent=gene-CJ235_05780;Dbxref=NCBI_GP:PMC19874.1;Name=PMC19874.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472063.1;locus_tag=CJ235_05780;product=tryptophan synthase subunit beta;protein_id=PMC19874.1;transl_table=11 PNGG01000002.1 Genbank gene 427891 428538 . - . ID=gene-CJ235_05785;Name=CJ235_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05785 PNGG01000002.1 Protein Homology CDS 427891 428538 . - 0 ID=cds-PMC19875.1;Parent=gene-CJ235_05785;Dbxref=NCBI_GP:PMC19875.1;Name=PMC19875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472057.1;locus_tag=CJ235_05785;product=phosphoribosylanthranilate isomerase;protein_id=PMC19875.1;transl_table=11 PNGG01000002.1 Genbank gene 428538 429317 . - . ID=gene-CJ235_05790;Name=CJ235_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05790 PNGG01000002.1 Protein Homology CDS 428538 429317 . - 0 ID=cds-PMC19876.1;Parent=gene-CJ235_05790;Dbxref=NCBI_GP:PMC19876.1;Name=PMC19876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507665.1;locus_tag=CJ235_05790;product=indole-3-glycerol phosphate synthase TrpC;protein_id=PMC19876.1;transl_table=11 PNGG01000002.1 Genbank gene 429301 430317 . - . ID=gene-CJ235_05795;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CJ235_05795 PNGG01000002.1 Protein Homology CDS 429301 430317 . - 0 ID=cds-PMC19877.1;Parent=gene-CJ235_05795;Dbxref=NCBI_GP:PMC19877.1;Name=PMC19877.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303153.1;locus_tag=CJ235_05795;product=anthranilate phosphoribosyltransferase;protein_id=PMC19877.1;transl_table=11 PNGG01000002.1 Genbank gene 430268 430891 . - . ID=gene-CJ235_05800;Name=CJ235_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05800 PNGG01000002.1 Protein Homology CDS 430268 430891 . - 0 ID=cds-PMC19878.1;Parent=gene-CJ235_05800;Dbxref=NCBI_GP:PMC19878.1;Name=PMC19878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472061.1;locus_tag=CJ235_05800;product=glutamine amidotransferase;protein_id=PMC19878.1;transl_table=11 PNGG01000002.1 Genbank pseudogene 430888 432295 . - . ID=gene-CJ235_05805;Name=CJ235_05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_05805;pseudo=true PNGG01000002.1 Protein Homology CDS 430888 432295 . - 0 ID=cds-CJ235_05805;Parent=gene-CJ235_05805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472016.1;locus_tag=CJ235_05805;product=anthranilate synthase component I;pseudo=true;transl_table=11 PNGG01000002.1 Genbank gene 432796 433836 . - . ID=gene-CJ235_05810;Name=CJ235_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05810 PNGG01000002.1 Protein Homology CDS 432796 433836 . - 0 ID=cds-PMC19879.1;Parent=gene-CJ235_05810;Dbxref=NCBI_GP:PMC19879.1;Name=PMC19879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472041.1;locus_tag=CJ235_05810;product=aminopeptidase;protein_id=PMC19879.1;transl_table=11 PNGG01000002.1 Genbank gene 433939 435030 . + . ID=gene-CJ235_05815;Name=CJ235_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05815 PNGG01000002.1 Protein Homology CDS 433939 435030 . + 0 ID=cds-PMC19880.1;Parent=gene-CJ235_05815;Dbxref=NCBI_GP:PMC19880.1;Name=PMC19880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472056.1;locus_tag=CJ235_05815;product=prephenate dehydrogenase;protein_id=PMC19880.1;transl_table=11 PNGG01000002.1 Genbank gene 435184 436446 . - . ID=gene-CJ235_05820;Name=CJ235_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05820 PNGG01000002.1 Protein Homology CDS 435184 436446 . - 0 ID=cds-PMC19881.1;Parent=gene-CJ235_05820;Dbxref=NCBI_GP:PMC19881.1;Name=PMC19881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764601.1;locus_tag=CJ235_05820;product=DNA repair protein;protein_id=PMC19881.1;transl_table=11 PNGG01000002.1 Genbank gene 436588 436773 . + . ID=gene-CJ235_05825;Name=CJ235_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05825 PNGG01000002.1 Protein Homology CDS 436588 436773 . + 0 ID=cds-PMC19882.1;Parent=gene-CJ235_05825;Dbxref=NCBI_GP:PMC19882.1;Name=PMC19882.1;Note=4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CJ235_05825;product=4-oxalocrotonate tautomerase;protein_id=PMC19882.1;transl_table=11 PNGG01000002.1 Genbank gene 436914 437906 . - . ID=gene-CJ235_05830;Name=CJ235_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05830 PNGG01000002.1 Protein Homology CDS 436914 437906 . - 0 ID=cds-PMC19883.1;Parent=gene-CJ235_05830;Dbxref=NCBI_GP:PMC19883.1;Name=PMC19883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835385.1;locus_tag=CJ235_05830;product=LytR family transcriptional regulator;protein_id=PMC19883.1;transl_table=11 PNGG01000002.1 Genbank gene 438044 438562 . + . ID=gene-CJ235_05835;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CJ235_05835 PNGG01000002.1 Protein Homology CDS 438044 438562 . + 0 ID=cds-PMC19884.1;Parent=gene-CJ235_05835;Dbxref=NCBI_GP:PMC19884.1;Name=PMC19884.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472045.1;locus_tag=CJ235_05835;product=peptide-methionine (S)-S-oxide reductase;protein_id=PMC19884.1;transl_table=11 PNGG01000002.1 Genbank gene 438759 441287 . - . ID=gene-CJ235_05840;Name=CJ235_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05840 PNGG01000002.1 Protein Homology CDS 438759 441287 . - 0 ID=cds-PMC19885.1;Parent=gene-CJ235_05840;Dbxref=NCBI_GP:PMC19885.1;Name=PMC19885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472040.1;locus_tag=CJ235_05840;product=phosphatidylglycerol lysyltransferase;protein_id=PMC19885.1;transl_table=11 PNGG01000002.1 Genbank gene 441610 442860 . - . ID=gene-CJ235_05845;Name=CJ235_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05845 PNGG01000002.1 Protein Homology CDS 441610 442860 . - 0 ID=cds-PMC19886.1;Parent=gene-CJ235_05845;Dbxref=NCBI_GP:PMC19886.1;Name=PMC19886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472003.1;locus_tag=CJ235_05845;product=AI-2E family transporter;protein_id=PMC19886.1;transl_table=11 PNGG01000002.1 Genbank gene 443199 444659 . - . ID=gene-CJ235_05850;Name=CJ235_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05850 PNGG01000002.1 Protein Homology CDS 443199 444659 . - 0 ID=cds-PMC19887.1;Parent=gene-CJ235_05850;Dbxref=NCBI_GP:PMC19887.1;Name=PMC19887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472064.1;locus_tag=CJ235_05850;product=alanine:cation symporter family protein;protein_id=PMC19887.1;transl_table=11 PNGG01000002.1 Genbank gene 444854 447259 . - . ID=gene-CJ235_05855;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CJ235_05855 PNGG01000002.1 Protein Homology CDS 444854 447259 . - 0 ID=cds-PMC19888.1;Parent=gene-CJ235_05855;Dbxref=NCBI_GP:PMC19888.1;Name=PMC19888.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275844.1;locus_tag=CJ235_05855;product=DNA topoisomerase IV subunit A;protein_id=PMC19888.1;transl_table=11 PNGG01000002.1 Genbank gene 447256 449256 . - . ID=gene-CJ235_05860;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CJ235_05860 PNGG01000002.1 Protein Homology CDS 447256 449256 . - 0 ID=cds-PMC19889.1;Parent=gene-CJ235_05860;Dbxref=NCBI_GP:PMC19889.1;Name=PMC19889.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275845.1;locus_tag=CJ235_05860;product=DNA topoisomerase IV subunit B;protein_id=PMC19889.1;transl_table=11 PNGG01000002.1 Genbank gene 449450 450058 . + . ID=gene-CJ235_05865;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CJ235_05865 PNGG01000002.1 Protein Homology CDS 449450 450058 . + 0 ID=cds-PMC19890.1;Parent=gene-CJ235_05865;Dbxref=NCBI_GP:PMC19890.1;Name=PMC19890.1;gbkey=CDS;gene=plsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=CJ235_05865;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=PMC19890.1;transl_table=11 PNGG01000002.1 Genbank gene 450267 450563 . + . ID=gene-CJ235_05870;Name=CJ235_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05870 PNGG01000002.1 Protein Homology CDS 450267 450563 . + 0 ID=cds-PMC19891.1;Parent=gene-CJ235_05870;Dbxref=NCBI_GP:PMC19891.1;Name=PMC19891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724387.1;locus_tag=CJ235_05870;product=hypothetical protein;protein_id=PMC19891.1;transl_table=11 PNGG01000002.1 Genbank gene 451042 451509 . - . ID=gene-CJ235_05875;Name=CJ235_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05875 PNGG01000002.1 Protein Homology CDS 451042 451509 . - 0 ID=cds-PMC19892.1;Parent=gene-CJ235_05875;Dbxref=NCBI_GP:PMC19892.1;Name=PMC19892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472004.1;locus_tag=CJ235_05875;product=acyl-CoA thioesterase;protein_id=PMC19892.1;transl_table=11 PNGG01000002.1 Genbank gene 451667 454372 . - . ID=gene-CJ235_05880;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CJ235_05880 PNGG01000002.1 Protein Homology CDS 451667 454372 . - 0 ID=cds-PMC19893.1;Parent=gene-CJ235_05880;Dbxref=NCBI_GP:PMC19893.1;Name=PMC19893.1;gbkey=CDS;gene=acnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764587.1;locus_tag=CJ235_05880;product=aconitate hydratase AcnA;protein_id=PMC19893.1;transl_table=11 PNGG01000002.1 Genbank gene 454891 456534 . - . ID=gene-CJ235_05885;Name=CJ235_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05885 PNGG01000002.1 Protein Homology CDS 454891 456534 . - 0 ID=cds-PMC19894.1;Parent=gene-CJ235_05885;Dbxref=NCBI_GP:PMC19894.1;Name=PMC19894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483375.1;locus_tag=CJ235_05885;product=BCCT family transporter;protein_id=PMC19894.1;transl_table=11 PNGG01000002.1 Genbank gene 456749 457114 . + . ID=gene-CJ235_05890;Name=CJ235_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05890 PNGG01000002.1 Protein Homology CDS 456749 457114 . + 0 ID=cds-PMC19895.1;Parent=gene-CJ235_05890;Dbxref=NCBI_GP:PMC19895.1;Name=PMC19895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472010.1;locus_tag=CJ235_05890;product=large conductance mechanosensitive channel protein MscL;protein_id=PMC19895.1;transl_table=11 PNGG01000002.1 Genbank gene 457212 460238 . - . ID=gene-CJ235_05895;Name=CJ235_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05895 PNGG01000002.1 Protein Homology CDS 457212 460238 . - 0 ID=cds-PMC19896.1;Parent=gene-CJ235_05895;Dbxref=NCBI_GP:PMC19896.1;Name=PMC19896.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13476.4%2CHMM:PF13558.4;locus_tag=CJ235_05895;product=SMC family ATPase;protein_id=PMC19896.1;transl_table=11 PNGG01000002.1 Genbank gene 460241 461368 . - . ID=gene-CJ235_05900;Name=CJ235_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05900 PNGG01000002.1 Protein Homology CDS 460241 461368 . - 0 ID=cds-PMC19897.1;Parent=gene-CJ235_05900;Dbxref=NCBI_GP:PMC19897.1;Name=PMC19897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472060.1;locus_tag=CJ235_05900;product=exonuclease SbcCD subunit D;protein_id=PMC19897.1;transl_table=11 PNGG01000002.1 Genbank gene 461585 462364 . - . ID=gene-CJ235_05905;Name=CJ235_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05905 PNGG01000002.1 GeneMarkS+ CDS 461585 462364 . - 0 ID=cds-PMC19898.1;Parent=gene-CJ235_05905;Dbxref=NCBI_GP:PMC19898.1;Name=PMC19898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_05905;product=hypothetical protein;protein_id=PMC19898.1;transl_table=11 PNGG01000002.1 Genbank gene 462467 463180 . - . ID=gene-CJ235_05910;Name=CJ235_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05910 PNGG01000002.1 GeneMarkS+ CDS 462467 463180 . - 0 ID=cds-PMC19899.1;Parent=gene-CJ235_05910;Dbxref=NCBI_GP:PMC19899.1;Name=PMC19899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_05910;product=hypothetical protein;protein_id=PMC19899.1;transl_table=11 PNGG01000002.1 Genbank gene 463341 463808 . - . ID=gene-CJ235_05915;Name=CJ235_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05915 PNGG01000002.1 Protein Homology CDS 463341 463808 . - 0 ID=cds-PMC19900.1;Parent=gene-CJ235_05915;Dbxref=NCBI_GP:PMC19900.1;Name=PMC19900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724380.1;locus_tag=CJ235_05915;product=DUF1453 domain-containing protein;protein_id=PMC19900.1;transl_table=11 PNGG01000002.1 Genbank gene 464011 464295 . - . ID=gene-CJ235_05920;Name=CJ235_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05920 PNGG01000002.1 Protein Homology CDS 464011 464295 . - 0 ID=cds-PMC19901.1;Parent=gene-CJ235_05920;Dbxref=NCBI_GP:PMC19901.1;Name=PMC19901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442722.1;locus_tag=CJ235_05920;product=hypothetical protein;protein_id=PMC19901.1;transl_table=11 PNGG01000002.1 Genbank gene 464453 466441 . - . ID=gene-CJ235_05925;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CJ235_05925 PNGG01000002.1 Protein Homology CDS 464453 466441 . - 0 ID=cds-PMC19902.1;Parent=gene-CJ235_05925;Dbxref=NCBI_GP:PMC19902.1;Name=PMC19902.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433588.1;locus_tag=CJ235_05925;product=transketolase;protein_id=PMC19902.1;transl_table=11 PNGG01000002.1 Genbank gene 466555 466806 . - . ID=gene-CJ235_05930;Name=CJ235_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05930 PNGG01000002.1 Protein Homology CDS 466555 466806 . - 0 ID=cds-PMC19903.1;Parent=gene-CJ235_05930;Dbxref=NCBI_GP:PMC19903.1;Name=PMC19903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465164.1;locus_tag=CJ235_05930;product=DUF896 family protein;protein_id=PMC19903.1;transl_table=11 PNGG01000002.1 Genbank gene 466910 467176 . - . ID=gene-CJ235_05935;Name=CJ235_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05935 PNGG01000002.1 GeneMarkS+ CDS 466910 467176 . - 0 ID=cds-PMC19904.1;Parent=gene-CJ235_05935;Dbxref=NCBI_GP:PMC19904.1;Name=PMC19904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_05935;product=hypothetical protein;protein_id=PMC19904.1;transl_table=11 PNGG01000002.1 Genbank gene 467320 467943 . + . ID=gene-CJ235_05940;Name=CJ235_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05940 PNGG01000002.1 Protein Homology CDS 467320 467943 . + 0 ID=cds-PMC19905.1;Parent=gene-CJ235_05940;Dbxref=NCBI_GP:PMC19905.1;Name=PMC19905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CJ235_05940;product=transcriptional repressor LexA;protein_id=PMC19905.1;transl_table=11 PNGG01000002.1 Genbank gene 468182 469204 . - . ID=gene-CJ235_05945;Name=CJ235_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05945 PNGG01000002.1 Protein Homology CDS 468182 469204 . - 0 ID=cds-PMC19906.1;Parent=gene-CJ235_05945;Dbxref=NCBI_GP:PMC19906.1;Name=PMC19906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507770.1;locus_tag=CJ235_05945;product=secretion protein;protein_id=PMC19906.1;transl_table=11 PNGG01000002.1 Genbank gene 469285 469554 . - . ID=gene-CJ235_05950;Name=CJ235_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05950 PNGG01000002.1 Protein Homology CDS 469285 469554 . - 0 ID=cds-PMC19907.1;Parent=gene-CJ235_05950;Dbxref=NCBI_GP:PMC19907.1;Name=PMC19907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CJ235_05950;product=30S ribosomal protein S14;protein_id=PMC19907.1;transl_table=11 PNGG01000002.1 Genbank gene 469857 470006 . + . ID=gene-CJ235_05955;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CJ235_05955 PNGG01000002.1 Protein Homology CDS 469857 470006 . + 0 ID=cds-PMC19908.1;Parent=gene-CJ235_05955;Dbxref=NCBI_GP:PMC19908.1;Name=PMC19908.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CJ235_05955;product=50S ribosomal protein L33;protein_id=PMC19908.1;transl_table=11 PNGG01000002.1 Genbank gene 470312 471757 . + . ID=gene-CJ235_05960;Name=CJ235_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05960 PNGG01000002.1 Protein Homology CDS 470312 471757 . + 0 ID=cds-PMC19909.1;Parent=gene-CJ235_05960;Dbxref=NCBI_GP:PMC19909.1;Name=PMC19909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764570.1;locus_tag=CJ235_05960;product=amino acid permease;protein_id=PMC19909.1;transl_table=11 PNGG01000002.1 Genbank gene 471924 472238 . + . ID=gene-CJ235_05965;Name=CJ235_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05965 PNGG01000002.1 Protein Homology CDS 471924 472238 . + 0 ID=cds-PMC19910.1;Parent=gene-CJ235_05965;Dbxref=NCBI_GP:PMC19910.1;Name=PMC19910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931073.1;locus_tag=CJ235_05965;product=hypothetical protein;protein_id=PMC19910.1;transl_table=11 PNGG01000002.1 Genbank gene 472385 473194 . - . ID=gene-CJ235_05970;Name=CJ235_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05970 PNGG01000002.1 Protein Homology CDS 472385 473194 . - 0 ID=cds-PMC19911.1;Parent=gene-CJ235_05970;Dbxref=NCBI_GP:PMC19911.1;Name=PMC19911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472052.1;locus_tag=CJ235_05970;product=Cof-type HAD-IIB family hydrolase;protein_id=PMC19911.1;transl_table=11 PNGG01000002.1 Genbank gene 473222 474139 . - . ID=gene-CJ235_05975;Name=CJ235_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05975 PNGG01000002.1 Protein Homology CDS 473222 474139 . - 0 ID=cds-PMC19912.1;Parent=gene-CJ235_05975;Dbxref=NCBI_GP:PMC19912.1;Name=PMC19912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511052.1;locus_tag=CJ235_05975;product=homoserine kinase;protein_id=PMC19912.1;transl_table=11 PNGG01000002.1 Genbank gene 474141 475202 . - . ID=gene-CJ235_05980;Name=CJ235_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05980 PNGG01000002.1 Protein Homology CDS 474141 475202 . - 0 ID=cds-PMC19913.1;Parent=gene-CJ235_05980;Dbxref=NCBI_GP:PMC19913.1;Name=PMC19913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499851.1;locus_tag=CJ235_05980;product=threonine synthase;protein_id=PMC19913.1;transl_table=11 PNGG01000002.1 Genbank gene 475208 476488 . - . ID=gene-CJ235_05985;Name=CJ235_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05985 PNGG01000002.1 Protein Homology CDS 475208 476488 . - 0 ID=cds-PMC19914.1;Parent=gene-CJ235_05985;Dbxref=NCBI_GP:PMC19914.1;Name=PMC19914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472025.1;locus_tag=CJ235_05985;product=homoserine dehydrogenase;protein_id=PMC19914.1;transl_table=11 PNGG01000002.1 Genbank gene 476676 478031 . + . ID=gene-CJ235_05990;Name=CJ235_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05990 PNGG01000002.1 Protein Homology CDS 476676 478031 . + 0 ID=cds-PMC19915.1;Parent=gene-CJ235_05990;Dbxref=NCBI_GP:PMC19915.1;Name=PMC19915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472007.1;locus_tag=CJ235_05990;product=aspartate kinase;protein_id=PMC19915.1;transl_table=11 PNGG01000002.1 Genbank gene 478128 478721 . - . ID=gene-CJ235_05995;Name=CJ235_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_05995 PNGG01000002.1 Protein Homology CDS 478128 478721 . - 0 ID=cds-PMC19916.1;Parent=gene-CJ235_05995;Dbxref=NCBI_GP:PMC19916.1;Name=PMC19916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472038.1;locus_tag=CJ235_05995;product=hypothetical protein;protein_id=PMC19916.1;transl_table=11 PNGG01000002.1 Genbank gene 478839 479294 . - . ID=gene-CJ235_06000;Name=CJ235_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06000 PNGG01000002.1 Protein Homology CDS 478839 479294 . - 0 ID=cds-PMC19917.1;Parent=gene-CJ235_06000;Dbxref=NCBI_GP:PMC19917.1;Name=PMC19917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00455.20;locus_tag=CJ235_06000;product=hypothetical protein;protein_id=PMC19917.1;transl_table=11 PNGG01000002.1 Genbank gene 479581 480441 . + . ID=gene-CJ235_06005;Name=CJ235_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06005 PNGG01000002.1 Protein Homology CDS 479581 480441 . + 0 ID=cds-PMC19918.1;Parent=gene-CJ235_06005;Dbxref=NCBI_GP:PMC19918.1;Name=PMC19918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507785.1;locus_tag=CJ235_06005;product=hypothetical protein;protein_id=PMC19918.1;transl_table=11 PNGG01000002.1 Genbank gene 480535 481062 . - . ID=gene-CJ235_06010;Name=CJ235_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06010 PNGG01000002.1 Protein Homology CDS 480535 481062 . - 0 ID=cds-PMC19919.1;Parent=gene-CJ235_06010;Dbxref=NCBI_GP:PMC19919.1;Name=PMC19919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448734.1;locus_tag=CJ235_06010;product=thermonuclease;protein_id=PMC19919.1;transl_table=11 PNGG01000002.1 Genbank gene 481211 481414 . + . ID=gene-CJ235_06015;Name=CJ235_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06015 PNGG01000002.1 Protein Homology CDS 481211 481414 . + 0 ID=cds-PMC19920.1;Parent=gene-CJ235_06015;Dbxref=NCBI_GP:PMC19920.1;Name=PMC19920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468740.1;locus_tag=CJ235_06015;product=hypothetical protein;protein_id=PMC19920.1;transl_table=11 PNGG01000002.1 Genbank gene 481711 482079 . + . ID=gene-CJ235_06020;Name=CJ235_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06020 PNGG01000002.1 GeneMarkS+ CDS 481711 482079 . + 0 ID=cds-PMC19921.1;Parent=gene-CJ235_06020;Dbxref=NCBI_GP:PMC19921.1;Name=PMC19921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06020;product=hypothetical protein;protein_id=PMC19921.1;transl_table=11 PNGG01000002.1 Genbank gene 482271 482507 . - . ID=gene-CJ235_06025;Name=CJ235_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06025 PNGG01000002.1 GeneMarkS+ CDS 482271 482507 . - 0 ID=cds-PMC19922.1;Parent=gene-CJ235_06025;Dbxref=NCBI_GP:PMC19922.1;Name=PMC19922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06025;product=hypothetical protein;protein_id=PMC19922.1;transl_table=11 PNGG01000002.1 Genbank gene 482651 482881 . - . ID=gene-CJ235_06030;Name=CJ235_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06030 PNGG01000002.1 GeneMarkS+ CDS 482651 482881 . - 0 ID=cds-PMC19923.1;Parent=gene-CJ235_06030;Dbxref=NCBI_GP:PMC19923.1;Name=PMC19923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06030;product=hypothetical protein;protein_id=PMC19923.1;transl_table=11 PNGG01000002.1 Genbank gene 483151 484491 . - . ID=gene-CJ235_06035;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CJ235_06035 PNGG01000002.1 Protein Homology CDS 483151 484491 . - 0 ID=cds-PMC19924.1;Parent=gene-CJ235_06035;Dbxref=NCBI_GP:PMC19924.1;Name=PMC19924.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001621208.1;locus_tag=CJ235_06035;product=type I glutamate--ammonia ligase;protein_id=PMC19924.1;transl_table=11 PNGG01000002.1 Genbank gene 484513 484851 . - . ID=gene-CJ235_06040;Name=CJ235_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06040 PNGG01000002.1 Protein Homology CDS 484513 484851 . - 0 ID=cds-PMC19925.1;Parent=gene-CJ235_06040;Dbxref=NCBI_GP:PMC19925.1;Name=PMC19925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448839.1;locus_tag=CJ235_06040;product=MerR family transcriptional regulator;protein_id=PMC19925.1;transl_table=11 PNGG01000002.1 Genbank gene 485292 486530 . - . ID=gene-CJ235_06045;Name=CJ235_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06045 PNGG01000002.1 Protein Homology CDS 485292 486530 . - 0 ID=cds-PMC19926.1;Parent=gene-CJ235_06045;Dbxref=NCBI_GP:PMC19926.1;Name=PMC19926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478257.1;locus_tag=CJ235_06045;product=hypothetical protein;protein_id=PMC19926.1;transl_table=11 PNGG01000002.1 Genbank gene 486550 487785 . - . ID=gene-CJ235_06050;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CJ235_06050 PNGG01000002.1 Protein Homology CDS 486550 487785 . - 0 ID=cds-PMC19927.1;Parent=gene-CJ235_06050;Dbxref=NCBI_GP:PMC19927.1;Name=PMC19927.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724347.1;locus_tag=CJ235_06050;product=GTPase HflX;protein_id=PMC19927.1;transl_table=11 PNGG01000002.1 Genbank gene 487984 488457 . + . ID=gene-CJ235_06055;Name=CJ235_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06055 PNGG01000002.1 Protein Homology CDS 487984 488457 . + 0 ID=cds-PMC19928.1;Parent=gene-CJ235_06055;Dbxref=NCBI_GP:PMC19928.1;Name=PMC19928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472438.1;locus_tag=CJ235_06055;product=glutathione peroxidase;protein_id=PMC19928.1;transl_table=11 PNGG01000002.1 Genbank gene 488762 488977 . - . ID=gene-CJ235_06060;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CJ235_06060 PNGG01000002.1 Protein Homology CDS 488762 488977 . - 0 ID=cds-PMC19929.1;Parent=gene-CJ235_06060;Dbxref=NCBI_GP:PMC19929.1;Name=PMC19929.1;gbkey=CDS;gene=hfq;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453134.1;locus_tag=CJ235_06060;product=RNA chaperone Hfq;protein_id=PMC19929.1;transl_table=11 PNGG01000002.1 Genbank gene 488964 489926 . - . ID=gene-CJ235_06065;Name=CJ235_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06065 PNGG01000002.1 Protein Homology CDS 488964 489926 . - 0 ID=cds-PMC19930.1;Parent=gene-CJ235_06065;Dbxref=NCBI_GP:PMC19930.1;Name=PMC19930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472439.1;locus_tag=CJ235_06065;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=PMC19930.1;transl_table=11 PNGG01000002.1 Genbank gene 489941 490864 . - . ID=gene-CJ235_06070;Name=CJ235_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06070 PNGG01000002.1 Protein Homology CDS 489941 490864 . - 0 ID=cds-PMC19931.1;Parent=gene-CJ235_06070;Dbxref=NCBI_GP:PMC19931.1;Name=PMC19931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472467.1;locus_tag=CJ235_06070;product=alpha/beta hydrolase;protein_id=PMC19931.1;transl_table=11 PNGG01000002.1 Genbank gene 491168 492841 . - . ID=gene-CJ235_06075;Name=CJ235_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06075 PNGG01000002.1 Protein Homology CDS 491168 492841 . - 0 ID=cds-PMC19932.1;Parent=gene-CJ235_06075;Dbxref=NCBI_GP:PMC19932.1;Name=PMC19932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483417.1;locus_tag=CJ235_06075;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=PMC19932.1;transl_table=11 PNGG01000002.1 Genbank gene 492989 494488 . - . ID=gene-CJ235_06080;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CJ235_06080 PNGG01000002.1 Protein Homology CDS 492989 494488 . - 0 ID=cds-PMC19933.1;Parent=gene-CJ235_06080;Dbxref=NCBI_GP:PMC19933.1;Name=PMC19933.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764533.1;locus_tag=CJ235_06080;product=glycerol kinase;protein_id=PMC19933.1;transl_table=11 PNGG01000002.1 Genbank gene 494772 495590 . - . ID=gene-CJ235_06085;Name=CJ235_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06085 PNGG01000002.1 Protein Homology CDS 494772 495590 . - 0 ID=cds-PMC19934.1;Parent=gene-CJ235_06085;Dbxref=NCBI_GP:PMC19934.1;Name=PMC19934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472390.1;locus_tag=CJ235_06085;product=aquaporin family protein;protein_id=PMC19934.1;transl_table=11 PNGG01000002.1 Genbank gene 495783 496316 . - . ID=gene-CJ235_06090;Name=CJ235_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06090 PNGG01000002.1 Protein Homology CDS 495783 496316 . - 0 ID=cds-PMC19935.1;Parent=gene-CJ235_06090;Dbxref=NCBI_GP:PMC19935.1;Name=PMC19935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724338.1;locus_tag=CJ235_06090;product=glycerol-3-phosphate responsive antiterminator;protein_id=PMC19935.1;transl_table=11 PNGG01000002.1 Genbank gene 496653 498617 . - . ID=gene-CJ235_06095;Name=CJ235_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06095 PNGG01000002.1 Protein Homology CDS 496653 498617 . - 0 ID=cds-PMC19936.1;Parent=gene-CJ235_06095;Dbxref=NCBI_GP:PMC19936.1;Name=PMC19936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764530.1;locus_tag=CJ235_06095;product=DNA mismatch repair endonuclease MutL;protein_id=PMC19936.1;transl_table=11 PNGG01000002.1 Genbank gene 498628 501300 . - . ID=gene-CJ235_06100;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CJ235_06100 PNGG01000002.1 Protein Homology CDS 498628 501300 . - 0 ID=cds-PMC19937.1;Parent=gene-CJ235_06100;Dbxref=NCBI_GP:PMC19937.1;Name=PMC19937.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512321.1;locus_tag=CJ235_06100;product=DNA mismatch repair protein MutS;protein_id=PMC19937.1;transl_table=11 PNGG01000002.1 Genbank gene 501588 502079 . - . ID=gene-CJ235_06105;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CJ235_06105 PNGG01000002.1 Protein Homology CDS 501588 502079 . - 0 ID=cds-PMC19938.1;Parent=gene-CJ235_06105;Dbxref=NCBI_GP:PMC19938.1;Name=PMC19938.1;gbkey=CDS;gene=thiW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465647.1;locus_tag=CJ235_06105;product=energy coupling factor transporter S component ThiW;protein_id=PMC19938.1;transl_table=11 PNGG01000002.1 Genbank gene 502105 502461 . - . ID=gene-CJ235_06110;Name=CJ235_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06110 PNGG01000002.1 Protein Homology CDS 502105 502461 . - 0 ID=cds-PMC19939.1;Parent=gene-CJ235_06110;Dbxref=NCBI_GP:PMC19939.1;Name=PMC19939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472419.1;locus_tag=CJ235_06110;product=hypothetical protein;protein_id=PMC19939.1;transl_table=11 PNGG01000002.1 Genbank gene 502461 504002 . - . ID=gene-CJ235_06115;Name=CJ235_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06115 PNGG01000002.1 Protein Homology CDS 502461 504002 . - 0 ID=cds-PMC20001.1;Parent=gene-CJ235_06115;Dbxref=NCBI_GP:PMC20001.1;Name=PMC20001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167791.1;locus_tag=CJ235_06115;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=PMC20001.1;transl_table=11 PNGG01000002.1 Genbank gene 504270 504575 . - . ID=gene-CJ235_06120;Name=CJ235_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06120 PNGG01000002.1 Protein Homology CDS 504270 504575 . - 0 ID=cds-PMC19940.1;Parent=gene-CJ235_06120;Dbxref=NCBI_GP:PMC19940.1;Name=PMC19940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472466.1;locus_tag=CJ235_06120;product=hypothetical protein;protein_id=PMC19940.1;transl_table=11 PNGG01000002.1 Genbank gene 504578 505213 . - . ID=gene-CJ235_06125;Name=CJ235_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06125 PNGG01000002.1 Protein Homology CDS 504578 505213 . - 0 ID=cds-PMC19941.1;Parent=gene-CJ235_06125;Dbxref=NCBI_GP:PMC19941.1;Name=PMC19941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472462.1;locus_tag=CJ235_06125;product=hypothetical protein;protein_id=PMC19941.1;transl_table=11 PNGG01000002.1 Genbank gene 505530 506396 . - . ID=gene-CJ235_06130;Name=CJ235_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06130 PNGG01000002.1 Protein Homology CDS 505530 506396 . - 0 ID=cds-PMC19942.1;Parent=gene-CJ235_06130;Dbxref=NCBI_GP:PMC19942.1;Name=PMC19942.1;Note=catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451251.1;locus_tag=CJ235_06130;product=2-oxoacid ferredoxin oxidoreductase;protein_id=PMC19942.1;transl_table=11 PNGG01000002.1 Genbank gene 506397 508157 . - . ID=gene-CJ235_06135;Name=CJ235_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06135 PNGG01000002.1 Protein Homology CDS 506397 508157 . - 0 ID=cds-PMC19943.1;Parent=gene-CJ235_06135;Dbxref=NCBI_GP:PMC19943.1;Name=PMC19943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303240.1;locus_tag=CJ235_06135;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=PMC19943.1;transl_table=11 PNGG01000002.1 Genbank gene 508271 509062 . - . ID=gene-CJ235_06140;Name=CJ235_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06140 PNGG01000002.1 Protein Homology CDS 508271 509062 . - 0 ID=cds-PMC19944.1;Parent=gene-CJ235_06140;Dbxref=NCBI_GP:PMC19944.1;Name=PMC19944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381784.1;locus_tag=CJ235_06140;product=TIGR00282 family metallophosphoesterase;protein_id=PMC19944.1;transl_table=11 PNGG01000002.1 Genbank gene 509293 509511 . + . ID=gene-CJ235_06145;Name=CJ235_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06145 PNGG01000002.1 Protein Homology CDS 509293 509511 . + 0 ID=cds-PMC19945.1;Parent=gene-CJ235_06145;Dbxref=NCBI_GP:PMC19945.1;Name=PMC19945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507825.1;locus_tag=CJ235_06145;product=hypothetical protein;protein_id=PMC19945.1;transl_table=11 PNGG01000002.1 Genbank gene 509779 511338 . - . ID=gene-CJ235_06150;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CJ235_06150 PNGG01000002.1 Protein Homology CDS 509779 511338 . - 0 ID=cds-PMC19946.1;Parent=gene-CJ235_06150;Dbxref=NCBI_GP:PMC19946.1;Name=PMC19946.1;gbkey=CDS;gene=rny;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CJ235_06150;product=ribonuclease Y;protein_id=PMC19946.1;transl_table=11 PNGG01000002.1 Genbank gene 511658 512704 . - . ID=gene-CJ235_06155;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CJ235_06155 PNGG01000002.1 Protein Homology CDS 511658 512704 . - 0 ID=cds-PMC19947.1;Parent=gene-CJ235_06155;Dbxref=NCBI_GP:PMC19947.1;Name=PMC19947.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638350.1;locus_tag=CJ235_06155;product=recombinase RecA;protein_id=PMC19947.1;transl_table=11 PNGG01000002.1 Genbank gene 512857 514020 . - . ID=gene-CJ235_06160;Name=CJ235_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06160 PNGG01000002.1 Protein Homology CDS 512857 514020 . - 0 ID=cds-PMC19948.1;Parent=gene-CJ235_06160;Dbxref=NCBI_GP:PMC19948.1;Name=PMC19948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472425.1;locus_tag=CJ235_06160;product=competence/damage-inducible protein A;protein_id=PMC19948.1;transl_table=11 PNGG01000002.1 Genbank gene 514316 514897 . - . ID=gene-CJ235_06165;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CJ235_06165 PNGG01000002.1 Protein Homology CDS 514316 514897 . - 0 ID=cds-PMC19949.1;Parent=gene-CJ235_06165;Dbxref=NCBI_GP:PMC19949.1;Name=PMC19949.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442602.1;locus_tag=CJ235_06165;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=PMC19949.1;transl_table=11 PNGG01000002.1 Genbank gene 514946 515338 . - . ID=gene-CJ235_06170;Name=CJ235_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06170 PNGG01000002.1 Protein Homology CDS 514946 515338 . - 0 ID=cds-PMC19950.1;Parent=gene-CJ235_06170;Dbxref=NCBI_GP:PMC19950.1;Name=PMC19950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483439.1;locus_tag=CJ235_06170;product=helix-turn-helix domain-containing protein;protein_id=PMC19950.1;transl_table=11 PNGG01000002.1 Genbank gene 515369 516211 . - . ID=gene-CJ235_06175;Name=CJ235_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06175 PNGG01000002.1 Protein Homology CDS 515369 516211 . - 0 ID=cds-PMC19951.1;Parent=gene-CJ235_06175;Dbxref=NCBI_GP:PMC19951.1;Name=PMC19951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499791.1;locus_tag=CJ235_06175;product=DUF3388 domain-containing protein;protein_id=PMC19951.1;transl_table=11 PNGG01000002.1 Genbank gene 516359 517063 . - . ID=gene-CJ235_06180;Name=CJ235_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06180 PNGG01000002.1 Protein Homology CDS 516359 517063 . - 0 ID=cds-PMC19952.1;Parent=gene-CJ235_06180;Dbxref=NCBI_GP:PMC19952.1;Name=PMC19952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472464.1;locus_tag=CJ235_06180;product=KR domain-containing protein;protein_id=PMC19952.1;transl_table=11 PNGG01000002.1 Genbank gene 517064 518347 . - . ID=gene-CJ235_06185;Name=CJ235_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06185 PNGG01000002.1 Protein Homology CDS 517064 518347 . - 0 ID=cds-PMC19953.1;Parent=gene-CJ235_06185;Dbxref=NCBI_GP:PMC19953.1;Name=PMC19953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507833.1;locus_tag=CJ235_06185;product=insulinase family protein;protein_id=PMC19953.1;transl_table=11 PNGG01000002.1 Genbank gene 518347 519624 . - . ID=gene-CJ235_06190;Name=CJ235_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06190 PNGG01000002.1 Protein Homology CDS 518347 519624 . - 0 ID=cds-PMC19954.1;Parent=gene-CJ235_06190;Dbxref=NCBI_GP:PMC19954.1;Name=PMC19954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472406.1;locus_tag=CJ235_06190;product=insulinase family protein;protein_id=PMC19954.1;transl_table=11 PNGG01000002.1 Genbank gene 520050 522494 . - . ID=gene-CJ235_06195;Name=CJ235_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06195 PNGG01000002.1 Protein Homology CDS 520050 522494 . - 0 ID=cds-PMC19955.1;Parent=gene-CJ235_06195;Dbxref=NCBI_GP:PMC19955.1;Name=PMC19955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507836.1;locus_tag=CJ235_06195;product=DNA translocase FtsK;protein_id=PMC19955.1;transl_table=11 PNGG01000002.1 Genbank gene 522663 524336 . - . ID=gene-CJ235_06200;Name=CJ235_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06200 PNGG01000002.1 Protein Homology CDS 522663 524336 . - 0 ID=cds-PMC19956.1;Parent=gene-CJ235_06200;Dbxref=NCBI_GP:PMC19956.1;Name=PMC19956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CJ235_06200;product=ribonuclease J;protein_id=PMC19956.1;transl_table=11 PNGG01000002.1 Genbank gene 524725 526827 . - . ID=gene-CJ235_06205;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CJ235_06205 PNGG01000002.1 Protein Homology CDS 524725 526827 . - 0 ID=cds-PMC19957.1;Parent=gene-CJ235_06205;Dbxref=NCBI_GP:PMC19957.1;Name=PMC19957.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930685.1;locus_tag=CJ235_06205;product=polyribonucleotide nucleotidyltransferase;protein_id=PMC19957.1;transl_table=11 PNGG01000002.1 Genbank gene 527084 527353 . - . ID=gene-CJ235_06210;Name=CJ235_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06210 PNGG01000002.1 Protein Homology CDS 527084 527353 . - 0 ID=cds-PMC19958.1;Parent=gene-CJ235_06210;Dbxref=NCBI_GP:PMC19958.1;Name=PMC19958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CJ235_06210;product=30S ribosomal protein S15;protein_id=PMC19958.1;transl_table=11 PNGG01000002.1 Genbank gene 527473 528444 . - . ID=gene-CJ235_06215;Name=CJ235_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06215 PNGG01000002.1 Protein Homology CDS 527473 528444 . - 0 ID=cds-PMC19959.1;Parent=gene-CJ235_06215;Dbxref=NCBI_GP:PMC19959.1;Name=PMC19959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764504.1;locus_tag=CJ235_06215;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=PMC19959.1;transl_table=11 PNGG01000002.1 Genbank gene 528457 529374 . - . ID=gene-CJ235_06220;Name=CJ235_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06220 PNGG01000002.1 Protein Homology CDS 528457 529374 . - 0 ID=cds-PMC19960.1;Parent=gene-CJ235_06220;Dbxref=NCBI_GP:PMC19960.1;Name=PMC19960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459273.1;locus_tag=CJ235_06220;product=tRNA pseudouridine(55) synthase TruB;protein_id=PMC19960.1;transl_table=11 PNGG01000002.1 Genbank gene 529457 529801 . - . ID=gene-CJ235_06225;Name=CJ235_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06225 PNGG01000002.1 Protein Homology CDS 529457 529801 . - 0 ID=cds-PMC19961.1;Parent=gene-CJ235_06225;Dbxref=NCBI_GP:PMC19961.1;Name=PMC19961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724307.1;locus_tag=CJ235_06225;product=30S ribosome-binding factor RbfA;protein_id=PMC19961.1;transl_table=11 PNGG01000002.1 Genbank gene 529945 532215 . - . ID=gene-CJ235_06230;Name=CJ235_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06230 PNGG01000002.1 Protein Homology CDS 529945 532215 . - 0 ID=cds-PMC19962.1;Parent=gene-CJ235_06230;Dbxref=NCBI_GP:PMC19962.1;Name=PMC19962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764500.1;locus_tag=CJ235_06230;product=translation initiation factor IF-2;protein_id=PMC19962.1;transl_table=11 PNGG01000002.1 Genbank gene 532232 532537 . - . ID=gene-CJ235_06235;Name=CJ235_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06235 PNGG01000002.1 Protein Homology CDS 532232 532537 . - 0 ID=cds-PMC19963.1;Parent=gene-CJ235_06235;Dbxref=NCBI_GP:PMC19963.1;Name=PMC19963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450544.1;locus_tag=CJ235_06235;product=hypothetical protein;protein_id=PMC19963.1;transl_table=11 PNGG01000002.1 Genbank gene 532534 532821 . - . ID=gene-CJ235_06240;Name=CJ235_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06240 PNGG01000002.1 Protein Homology CDS 532534 532821 . - 0 ID=cds-PMC19964.1;Parent=gene-CJ235_06240;Dbxref=NCBI_GP:PMC19964.1;Name=PMC19964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472424.1;locus_tag=CJ235_06240;product=DUF448 domain-containing protein;protein_id=PMC19964.1;transl_table=11 PNGG01000002.1 Genbank gene 532838 534118 . - . ID=gene-CJ235_06245;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CJ235_06245 PNGG01000002.1 Protein Homology CDS 532838 534118 . - 0 ID=cds-PMC19965.1;Parent=gene-CJ235_06245;Dbxref=NCBI_GP:PMC19965.1;Name=PMC19965.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009381745.1;locus_tag=CJ235_06245;product=transcription termination/antitermination protein NusA;protein_id=PMC19965.1;transl_table=11 PNGG01000002.1 Genbank gene 534139 534606 . - . ID=gene-CJ235_06250;Name=CJ235_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06250 PNGG01000002.1 Protein Homology CDS 534139 534606 . - 0 ID=cds-PMC19966.1;Parent=gene-CJ235_06250;Dbxref=NCBI_GP:PMC19966.1;Name=PMC19966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764496.1;locus_tag=CJ235_06250;product=ribosome maturation factor RimP;protein_id=PMC19966.1;transl_table=11 PNGG01000002.1 Genbank gene 534751 539067 . - . ID=gene-CJ235_06255;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=CJ235_06255 PNGG01000002.1 Protein Homology CDS 534751 539067 . - 0 ID=cds-PMC19967.1;Parent=gene-CJ235_06255;Dbxref=NCBI_GP:PMC19967.1;Name=PMC19967.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity;gbkey=CDS;gene=polC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251777.1;locus_tag=CJ235_06255;product=PolC-type DNA polymerase III;protein_id=PMC19967.1;transl_table=11 PNGG01000002.1 Genbank gene 539309 541012 . - . ID=gene-CJ235_06260;Name=CJ235_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06260 PNGG01000002.1 Protein Homology CDS 539309 541012 . - 0 ID=cds-PMC19968.1;Parent=gene-CJ235_06260;Dbxref=NCBI_GP:PMC19968.1;Name=PMC19968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365076.1;locus_tag=CJ235_06260;product=proline--tRNA ligase;protein_id=PMC19968.1;transl_table=11 PNGG01000002.1 Genbank gene 541035 542321 . - . ID=gene-CJ235_06265;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CJ235_06265 PNGG01000002.1 Protein Homology CDS 541035 542321 . - 0 ID=cds-PMC20002.1;Parent=gene-CJ235_06265;Dbxref=NCBI_GP:PMC20002.1;Name=PMC20002.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764493.1;locus_tag=CJ235_06265;product=RIP metalloprotease RseP;protein_id=PMC20002.1;transl_table=11 PNGG01000002.1 Genbank gene 542576 543358 . - . ID=gene-CJ235_06270;Name=CJ235_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06270 PNGG01000002.1 Protein Homology CDS 542576 543358 . - 0 ID=cds-PMC19969.1;Parent=gene-CJ235_06270;Dbxref=NCBI_GP:PMC19969.1;Name=PMC19969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=CJ235_06270;product=phosphatidate cytidylyltransferase;protein_id=PMC19969.1;transl_table=11 PNGG01000002.1 Genbank gene 543375 544139 . - . ID=gene-CJ235_06275;Name=CJ235_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06275 PNGG01000002.1 Protein Homology CDS 543375 544139 . - 0 ID=cds-PMC19970.1;Parent=gene-CJ235_06275;Dbxref=NCBI_GP:PMC19970.1;Name=PMC19970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450552.1;locus_tag=CJ235_06275;product=isoprenyl transferase;protein_id=PMC19970.1;transl_table=11 PNGG01000002.1 Genbank gene 544363 544917 . - . ID=gene-CJ235_06280;Name=CJ235_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06280 PNGG01000002.1 Protein Homology CDS 544363 544917 . - 0 ID=cds-PMC19971.1;Parent=gene-CJ235_06280;Dbxref=NCBI_GP:PMC19971.1;Name=PMC19971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CJ235_06280;product=ribosome recycling factor;protein_id=PMC19971.1;transl_table=11 PNGG01000002.1 Genbank gene 544934 545656 . - . ID=gene-CJ235_06285;Name=CJ235_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06285 PNGG01000002.1 Protein Homology CDS 544934 545656 . - 0 ID=cds-PMC19972.1;Parent=gene-CJ235_06285;Dbxref=NCBI_GP:PMC19972.1;Name=PMC19972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CJ235_06285;product=UMP kinase;protein_id=PMC19972.1;transl_table=11 PNGG01000002.1 Genbank gene 546231 547109 . - . ID=gene-CJ235_06290;Name=CJ235_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06290 PNGG01000002.1 Protein Homology CDS 546231 547109 . - 0 ID=cds-PMC19973.1;Parent=gene-CJ235_06290;Dbxref=NCBI_GP:PMC19973.1;Name=PMC19973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CJ235_06290;product=elongation factor Ts;protein_id=PMC19973.1;transl_table=11 PNGG01000002.1 Genbank gene 547201 547998 . - . ID=gene-CJ235_06295;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CJ235_06295 PNGG01000002.1 Protein Homology CDS 547201 547998 . - 0 ID=cds-PMC19974.1;Parent=gene-CJ235_06295;Dbxref=NCBI_GP:PMC19974.1;Name=PMC19974.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448842.1;locus_tag=CJ235_06295;product=30S ribosomal protein S2;protein_id=PMC19974.1;transl_table=11 PNGG01000002.1 Genbank gene 548389 549162 . - . ID=gene-CJ235_06300;Name=CJ235_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06300 PNGG01000002.1 Protein Homology CDS 548389 549162 . - 0 ID=cds-PMC19975.1;Parent=gene-CJ235_06300;Dbxref=NCBI_GP:PMC19975.1;Name=PMC19975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=CJ235_06300;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=PMC19975.1;transl_table=11 PNGG01000002.1 Genbank gene 549187 550599 . - . ID=gene-CJ235_06305;Name=CJ235_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06305 PNGG01000002.1 Protein Homology CDS 549187 550599 . - 0 ID=cds-PMC19976.1;Parent=gene-CJ235_06305;Dbxref=NCBI_GP:PMC19976.1;Name=PMC19976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=CJ235_06305;product=ATP-dependent protease ATPase subunit HslU;protein_id=PMC19976.1;transl_table=11 PNGG01000002.1 Genbank gene 550744 551286 . - . ID=gene-CJ235_06310;Name=CJ235_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06310 PNGG01000002.1 Protein Homology CDS 550744 551286 . - 0 ID=cds-PMC19977.1;Parent=gene-CJ235_06310;Dbxref=NCBI_GP:PMC19977.1;Name=PMC19977.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499761.1;locus_tag=CJ235_06310;product=ATP-dependent protease subunit HslV;protein_id=PMC19977.1;transl_table=11 PNGG01000002.1 Genbank gene 551288 552181 . - . ID=gene-CJ235_06315;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CJ235_06315 PNGG01000002.1 Protein Homology CDS 551288 552181 . - 0 ID=cds-PMC19978.1;Parent=gene-CJ235_06315;Dbxref=NCBI_GP:PMC19978.1;Name=PMC19978.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455419.1;locus_tag=CJ235_06315;product=tyrosine recombinase XerC;protein_id=PMC19978.1;transl_table=11 PNGG01000002.1 Genbank gene 552295 553605 . - . ID=gene-CJ235_06320;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CJ235_06320 PNGG01000002.1 Protein Homology CDS 552295 553605 . - 0 ID=cds-PMC19979.1;Parent=gene-CJ235_06320;Dbxref=NCBI_GP:PMC19979.1;Name=PMC19979.1;gbkey=CDS;gene=trmFO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472393.1;locus_tag=CJ235_06320;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=PMC19979.1;transl_table=11 PNGG01000002.1 Genbank gene 553868 555934 . - . ID=gene-CJ235_06325;Name=CJ235_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06325 PNGG01000002.1 Protein Homology CDS 553868 555934 . - 0 ID=cds-PMC19980.1;Parent=gene-CJ235_06325;Dbxref=NCBI_GP:PMC19980.1;Name=PMC19980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CJ235_06325;product=type I DNA topoisomerase;protein_id=PMC19980.1;transl_table=11 PNGG01000002.1 Genbank gene 556087 556761 . - . ID=gene-CJ235_06330;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CJ235_06330 PNGG01000002.1 Protein Homology CDS 556087 556761 . - 0 ID=cds-PMC19981.1;Parent=gene-CJ235_06330;Dbxref=NCBI_GP:PMC19981.1;Name=PMC19981.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472405.1;locus_tag=CJ235_06330;product=DNA-protecting protein DprA;protein_id=PMC19981.1;transl_table=11 PNGG01000002.1 Genbank gene 557323 558231 . - . ID=gene-CJ235_06335;Name=CJ235_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06335 PNGG01000002.1 Protein Homology CDS 557323 558231 . - 0 ID=cds-PMC19982.1;Parent=gene-CJ235_06335;Dbxref=NCBI_GP:PMC19982.1;Name=PMC19982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764479.1;locus_tag=CJ235_06335;product=succinate--CoA ligase subunit alpha;protein_id=PMC19982.1;transl_table=11 PNGG01000002.1 Genbank gene 558253 559419 . - . ID=gene-CJ235_06340;Name=CJ235_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06340 PNGG01000002.1 Protein Homology CDS 558253 559419 . - 0 ID=cds-PMC19983.1;Parent=gene-CJ235_06340;Dbxref=NCBI_GP:PMC19983.1;Name=PMC19983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CJ235_06340;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=PMC19983.1;transl_table=11 PNGG01000002.1 Genbank gene 559522 560298 . - . ID=gene-CJ235_06345;Name=CJ235_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06345 PNGG01000002.1 Protein Homology CDS 559522 560298 . - 0 ID=cds-PMC19984.1;Parent=gene-CJ235_06345;Dbxref=NCBI_GP:PMC19984.1;Name=PMC19984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472410.1;locus_tag=CJ235_06345;product=ribonuclease HII;protein_id=PMC19984.1;transl_table=11 PNGG01000002.1 Genbank gene 560295 561164 . - . ID=gene-CJ235_06350;Name=CJ235_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06350 PNGG01000002.1 Protein Homology CDS 560295 561164 . - 0 ID=cds-PMC19985.1;Parent=gene-CJ235_06350;Dbxref=NCBI_GP:PMC19985.1;Name=PMC19985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472395.1;locus_tag=CJ235_06350;product=ribosome biogenesis GTPase YlqF;protein_id=PMC19985.1;transl_table=11 PNGG01000002.1 Genbank gene 561384 562244 . - . ID=gene-CJ235_06355;Name=CJ235_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06355 PNGG01000002.1 Protein Homology CDS 561384 562244 . - 0 ID=cds-PMC19986.1;Parent=gene-CJ235_06355;Dbxref=NCBI_GP:PMC19986.1;Name=PMC19986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472444.1;locus_tag=CJ235_06355;product=iron citrate ABC transporter substrate-binding protein;protein_id=PMC19986.1;transl_table=11 PNGG01000002.1 Genbank gene 562593 565229 . + . ID=gene-CJ235_06360;Name=CJ235_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06360 PNGG01000002.1 Protein Homology CDS 562593 565229 . + 0 ID=cds-PMC19987.1;Parent=gene-CJ235_06360;Dbxref=NCBI_GP:PMC19987.1;Name=PMC19987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468464.1;locus_tag=CJ235_06360;product=hypothetical protein;protein_id=PMC19987.1;transl_table=11 PNGG01000002.1 Genbank gene 565455 565805 . - . ID=gene-CJ235_06365;Name=CJ235_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06365 PNGG01000002.1 Protein Homology CDS 565455 565805 . - 0 ID=cds-PMC19988.1;Parent=gene-CJ235_06365;Dbxref=NCBI_GP:PMC19988.1;Name=PMC19988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450570.1;locus_tag=CJ235_06365;product=50S ribosomal protein L19;protein_id=PMC19988.1;transl_table=11 PNGG01000002.1 Genbank gene 565914 566648 . - . ID=gene-CJ235_06370;Name=CJ235_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06370 PNGG01000002.1 Protein Homology CDS 565914 566648 . - 0 ID=cds-PMC19989.1;Parent=gene-CJ235_06370;Dbxref=NCBI_GP:PMC19989.1;Name=PMC19989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459305.1;locus_tag=CJ235_06370;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=PMC19989.1;transl_table=11 PNGG01000002.1 Genbank gene 566648 567151 . - . ID=gene-CJ235_06375;Name=CJ235_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06375 PNGG01000002.1 Protein Homology CDS 566648 567151 . - 0 ID=cds-PMC19990.1;Parent=gene-CJ235_06375;Dbxref=NCBI_GP:PMC19990.1;Name=PMC19990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275961.1;locus_tag=CJ235_06375;product=ribosome maturation factor RimM;protein_id=PMC19990.1;transl_table=11 PNGG01000002.1 Genbank gene 567290 567556 . - . ID=gene-CJ235_06380;Name=CJ235_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06380 PNGG01000002.1 Protein Homology CDS 567290 567556 . - 0 ID=cds-PMC19991.1;Parent=gene-CJ235_06380;Dbxref=NCBI_GP:PMC19991.1;Name=PMC19991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_764468.1;locus_tag=CJ235_06380;product=30S ribosomal protein S16;protein_id=PMC19991.1;transl_table=11 PNGG01000002.1 Genbank gene 567829 568527 . - . ID=gene-CJ235_06385;Name=CJ235_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06385 PNGG01000002.1 Protein Homology CDS 567829 568527 . - 0 ID=cds-PMC19992.1;Parent=gene-CJ235_06385;Dbxref=NCBI_GP:PMC19992.1;Name=PMC19992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02371.14;locus_tag=CJ235_06385;product=hypothetical protein;protein_id=PMC19992.1;transl_table=11 ##sequence-region PNGG01000020.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000020.1 Genbank region 1 737 . + . ID=PNGG01000020.1:1..737;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000020.1 Genbank gene 1 109 . + . ID=gene-CJ235_12320;Name=CJ235_12320;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12320;partial=true;start_range=.,1 PNGG01000020.1 Genbank rRNA 1 109 . + . ID=rna-CJ235_12320;Parent=gene-CJ235_12320;gbkey=rRNA;locus_tag=CJ235_12320;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000020.1 Genbank exon 1 109 . + . ID=exon-CJ235_12320-1;Parent=rna-CJ235_12320;gbkey=rRNA;locus_tag=CJ235_12320;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000020.1 Genbank gene 241 314 . + . ID=gene-CJ235_12325;Name=CJ235_12325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12325 PNGG01000020.1 tRNAscan-SE tRNA 241 314 . + . ID=rna-CJ235_12325;Parent=gene-CJ235_12325;anticodon=(pos:275..277);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12325;product=tRNA-Ile PNGG01000020.1 tRNAscan-SE exon 241 314 . + . ID=exon-CJ235_12325-1;Parent=rna-CJ235_12325;anticodon=(pos:275..277);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12325;product=tRNA-Ile PNGG01000020.1 Genbank gene 331 406 . + . ID=gene-CJ235_12330;Name=CJ235_12330;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_12330 PNGG01000020.1 tRNAscan-SE tRNA 331 406 . + . ID=rna-CJ235_12330;Parent=gene-CJ235_12330;anticodon=(pos:364..366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12330;product=tRNA-Ala PNGG01000020.1 tRNAscan-SE exon 331 406 . + . ID=exon-CJ235_12330-1;Parent=rna-CJ235_12330;anticodon=(pos:364..366);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_12330;product=tRNA-Ala PNGG01000020.1 Genbank gene 581 737 . + . ID=gene-CJ235_12335;Name=CJ235_12335;end_range=737,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_12335;partial=true PNGG01000020.1 Genbank rRNA 581 737 . + . ID=rna-CJ235_12335;Parent=gene-CJ235_12335;end_range=737,.;gbkey=rRNA;locus_tag=CJ235_12335;partial=true;product=23S ribosomal RNA PNGG01000020.1 Genbank exon 581 737 . + . ID=exon-CJ235_12335-1;Parent=rna-CJ235_12335;end_range=737,.;gbkey=rRNA;locus_tag=CJ235_12335;partial=true;product=23S ribosomal RNA ##sequence-region PNGG01000021.1 1 558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000021.1 Genbank region 1 558 . + . ID=PNGG01000021.1:1..558;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000021.1 Genbank gene 1 558 . - . ID=gene-CJ235_12340;Name=CJ235_12340;end_range=558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12340;partial=true;start_range=.,1 PNGG01000021.1 Protein Homology CDS 1 558 . - 2 ID=cds-PMC16541.1;Parent=gene-CJ235_12340;Dbxref=NCBI_GP:PMC16541.1;Name=PMC16541.1;end_range=558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446764.1;locus_tag=CJ235_12340;partial=true;product=accessory Sec-dependent LPXTG-anchored adhesin;protein_id=PMC16541.1;start_range=.,1;transl_table=11 ##sequence-region PNGG01000022.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000022.1 Genbank region 1 318 . + . ID=PNGG01000022.1:1..318;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000022.1 Genbank gene 1 318 . - . ID=gene-CJ235_12345;Name=CJ235_12345;end_range=318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_12345;partial=true;start_range=.,1 PNGG01000022.1 Protein Homology CDS 1 318 . - 2 ID=cds-PMC16532.1;Parent=gene-CJ235_12345;Dbxref=NCBI_GP:PMC16532.1;Name=PMC16532.1;end_range=318,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046165954.1;locus_tag=CJ235_12345;partial=true;product=hypothetical protein;protein_id=PMC16532.1;start_range=.,1;transl_table=11 ##sequence-region PNGG01000003.1 1 342644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000003.1 Genbank region 1 342644 . + . ID=PNGG01000003.1:1..342644;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000003.1 Genbank gene 362 1255 . + . ID=gene-CJ235_06390;Name=CJ235_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06390 PNGG01000003.1 Protein Homology CDS 362 1255 . + 0 ID=cds-PMC18894.1;Parent=gene-CJ235_06390;Dbxref=NCBI_GP:PMC18894.1;Name=PMC18894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471440.1;locus_tag=CJ235_06390;product=fructose bisphosphate aldolase;protein_id=PMC18894.1;transl_table=11 PNGG01000003.1 Genbank gene 1415 2896 . - . ID=gene-CJ235_06395;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CJ235_06395 PNGG01000003.1 Protein Homology CDS 1415 2896 . - 0 ID=cds-PMC18895.1;Parent=gene-CJ235_06395;Dbxref=NCBI_GP:PMC18895.1;Name=PMC18895.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471429.1;locus_tag=CJ235_06395;product=cardiolipin synthase;protein_id=PMC18895.1;transl_table=11 PNGG01000003.1 Genbank gene 3176 4114 . - . ID=gene-CJ235_06400;Name=CJ235_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06400 PNGG01000003.1 Protein Homology CDS 3176 4114 . - 0 ID=cds-PMC18896.1;Parent=gene-CJ235_06400;Dbxref=NCBI_GP:PMC18896.1;Name=PMC18896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471437.1;locus_tag=CJ235_06400;product=2-dehydropantoate 2-reductase;protein_id=PMC18896.1;transl_table=11 PNGG01000003.1 Genbank gene 4235 4423 . - . ID=gene-CJ235_06405;Name=CJ235_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06405 PNGG01000003.1 GeneMarkS+ CDS 4235 4423 . - 0 ID=cds-PMC18897.1;Parent=gene-CJ235_06405;Dbxref=NCBI_GP:PMC18897.1;Name=PMC18897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06405;product=hypothetical protein;protein_id=PMC18897.1;transl_table=11 PNGG01000003.1 Genbank gene 4718 5377 . - . ID=gene-CJ235_06410;Name=CJ235_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06410 PNGG01000003.1 Protein Homology CDS 4718 5377 . - 0 ID=cds-PMC18898.1;Parent=gene-CJ235_06410;Dbxref=NCBI_GP:PMC18898.1;Name=PMC18898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479913.1;locus_tag=CJ235_06410;product=hypothetical protein;protein_id=PMC18898.1;transl_table=11 PNGG01000003.1 Genbank gene 5428 7218 . - . ID=gene-CJ235_06415;Name=CJ235_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06415 PNGG01000003.1 Protein Homology CDS 5428 7218 . - 0 ID=cds-PMC18899.1;Parent=gene-CJ235_06415;Dbxref=NCBI_GP:PMC18899.1;Name=PMC18899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471441.1;locus_tag=CJ235_06415;product=serine/threonine protein phosphatase;protein_id=PMC18899.1;transl_table=11 PNGG01000003.1 Genbank gene 8036 9037 . - . ID=gene-CJ235_06420;Name=CJ235_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06420 PNGG01000003.1 Protein Homology CDS 8036 9037 . - 0 ID=cds-PMC18900.1;Parent=gene-CJ235_06420;Dbxref=NCBI_GP:PMC18900.1;Name=PMC18900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471151.1;locus_tag=CJ235_06420;product=LLM class flavin-dependent oxidoreductase;protein_id=PMC18900.1;transl_table=11 PNGG01000003.1 Genbank gene 9053 9802 . - . ID=gene-CJ235_06425;Name=CJ235_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06425 PNGG01000003.1 Protein Homology CDS 9053 9802 . - 0 ID=cds-PMC18901.1;Parent=gene-CJ235_06425;Dbxref=NCBI_GP:PMC18901.1;Name=PMC18901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424972.1;locus_tag=CJ235_06425;product=glycerophosphoryl diester phosphodiesterase;protein_id=PMC18901.1;transl_table=11 PNGG01000003.1 Genbank gene 9975 11372 . + . ID=gene-CJ235_06430;Name=CJ235_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06430 PNGG01000003.1 Protein Homology CDS 9975 11372 . + 0 ID=cds-PMC18902.1;Parent=gene-CJ235_06430;Dbxref=NCBI_GP:PMC18902.1;Name=PMC18902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471150.1;locus_tag=CJ235_06430;product=MFS transporter;protein_id=PMC18902.1;transl_table=11 PNGG01000003.1 Genbank gene 13918 14742 . - . ID=gene-CJ235_06435;Name=CJ235_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06435 PNGG01000003.1 Protein Homology CDS 13918 14742 . - 0 ID=cds-PMC18903.1;Parent=gene-CJ235_06435;Dbxref=NCBI_GP:PMC18903.1;Name=PMC18903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01177.20;locus_tag=CJ235_06435;product=hypothetical protein;protein_id=PMC18903.1;transl_table=11 PNGG01000003.1 Genbank gene 15013 16089 . - . ID=gene-CJ235_06440;Name=CJ235_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06440 PNGG01000003.1 Protein Homology CDS 15013 16089 . - 0 ID=cds-PMC18904.1;Parent=gene-CJ235_06440;Dbxref=NCBI_GP:PMC18904.1;Name=PMC18904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510683.1;locus_tag=CJ235_06440;product=hypothetical protein;protein_id=PMC18904.1;transl_table=11 PNGG01000003.1 Genbank gene 16339 17400 . - . ID=gene-CJ235_06445;Name=buk;gbkey=Gene;gene=buk;gene_biotype=protein_coding;locus_tag=CJ235_06445 PNGG01000003.1 Protein Homology CDS 16339 17400 . - 0 ID=cds-PMC18905.1;Parent=gene-CJ235_06445;Dbxref=NCBI_GP:PMC18905.1;Name=PMC18905.1;gbkey=CDS;gene=buk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472800.1;locus_tag=CJ235_06445;product=butyrate kinase;protein_id=PMC18905.1;transl_table=11 PNGG01000003.1 Genbank gene 17425 18318 . - . ID=gene-CJ235_06450;Name=CJ235_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06450 PNGG01000003.1 Protein Homology CDS 17425 18318 . - 0 ID=cds-PMC18906.1;Parent=gene-CJ235_06450;Dbxref=NCBI_GP:PMC18906.1;Name=PMC18906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472811.1;locus_tag=CJ235_06450;product=phosphate butyryltransferase;protein_id=PMC18906.1;transl_table=11 PNGG01000003.1 Genbank gene 18388 19236 . - . ID=gene-CJ235_06455;Name=CJ235_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06455 PNGG01000003.1 Protein Homology CDS 18388 19236 . - 0 ID=cds-PMC18907.1;Parent=gene-CJ235_06455;Dbxref=NCBI_GP:PMC18907.1;Name=PMC18907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472820.1;locus_tag=CJ235_06455;product=XRE family transcriptional regulator;protein_id=PMC18907.1;transl_table=11 PNGG01000003.1 Genbank gene 19423 20664 . + . ID=gene-CJ235_06460;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CJ235_06460 PNGG01000003.1 Protein Homology CDS 19423 20664 . + 0 ID=cds-PMC18908.1;Parent=gene-CJ235_06460;Dbxref=NCBI_GP:PMC18908.1;Name=PMC18908.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472816.1;locus_tag=CJ235_06460;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=PMC18908.1;transl_table=11 PNGG01000003.1 Genbank gene 20985 22187 . + . ID=gene-CJ235_06465;Name=CJ235_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06465 PNGG01000003.1 Protein Homology CDS 20985 22187 . + 0 ID=cds-PMC18909.1;Parent=gene-CJ235_06465;Dbxref=NCBI_GP:PMC18909.1;Name=PMC18909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472809.1;locus_tag=CJ235_06465;product=MFS transporter;protein_id=PMC18909.1;transl_table=11 PNGG01000003.1 Genbank gene 22809 23717 . - . ID=gene-CJ235_06470;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CJ235_06470 PNGG01000003.1 Protein Homology CDS 22809 23717 . - 0 ID=cds-PMC18910.1;Parent=gene-CJ235_06470;Dbxref=NCBI_GP:PMC18910.1;Name=PMC18910.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472799.1;locus_tag=CJ235_06470;product=ribokinase;protein_id=PMC18910.1;transl_table=11 PNGG01000003.1 Genbank gene 23784 24668 . - . ID=gene-CJ235_06475;Name=CJ235_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06475 PNGG01000003.1 Protein Homology CDS 23784 24668 . - 0 ID=cds-PMC18911.1;Parent=gene-CJ235_06475;Dbxref=NCBI_GP:PMC18911.1;Name=PMC18911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CJ235_06475;product=ribose transporter RbsU;protein_id=PMC18911.1;transl_table=11 PNGG01000003.1 Genbank gene 24979 25728 . + . ID=gene-CJ235_06480;Name=CJ235_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06480 PNGG01000003.1 Protein Homology CDS 24979 25728 . + 0 ID=cds-PMC18912.1;Parent=gene-CJ235_06480;Dbxref=NCBI_GP:PMC18912.1;Name=PMC18912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014822965.1;locus_tag=CJ235_06480;product=2-pyrone-4%2C6-dicarboxylate hydrolase;protein_id=PMC18912.1;transl_table=11 PNGG01000003.1 Genbank gene 25873 27354 . - . ID=gene-CJ235_06485;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CJ235_06485 PNGG01000003.1 Protein Homology CDS 25873 27354 . - 0 ID=cds-PMC18913.1;Parent=gene-CJ235_06485;Dbxref=NCBI_GP:PMC18913.1;Name=PMC18913.1;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472819.1;locus_tag=CJ235_06485;product=malate:quinone oxidoreductase;protein_id=PMC18913.1;transl_table=11 PNGG01000003.1 Genbank gene 27885 29477 . + . ID=gene-CJ235_06490;Name=CJ235_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06490 PNGG01000003.1 Protein Homology CDS 27885 29477 . + 0 ID=cds-PMC18914.1;Parent=gene-CJ235_06490;Dbxref=NCBI_GP:PMC18914.1;Name=PMC18914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472801.1;locus_tag=CJ235_06490;product=acyl--CoA ligase;protein_id=PMC18914.1;transl_table=11 PNGG01000003.1 Genbank gene 29664 30677 . - . ID=gene-CJ235_06495;Name=CJ235_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06495 PNGG01000003.1 Protein Homology CDS 29664 30677 . - 0 ID=cds-PMC18915.1;Parent=gene-CJ235_06495;Dbxref=NCBI_GP:PMC18915.1;Name=PMC18915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472815.1;locus_tag=CJ235_06495;product=NADP-dependent oxidoreductase;protein_id=PMC18915.1;transl_table=11 PNGG01000003.1 Genbank gene 30733 31719 . - . ID=gene-CJ235_06500;Name=CJ235_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06500 PNGG01000003.1 Protein Homology CDS 30733 31719 . - 0 ID=cds-PMC18916.1;Parent=gene-CJ235_06500;Dbxref=NCBI_GP:PMC18916.1;Name=PMC18916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472797.1;locus_tag=CJ235_06500;product=linear amide C-N hydrolase;protein_id=PMC18916.1;transl_table=11 PNGG01000003.1 Genbank gene 31735 32655 . - . ID=gene-CJ235_06505;Name=CJ235_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06505 PNGG01000003.1 Protein Homology CDS 31735 32655 . - 0 ID=cds-PMC18917.1;Parent=gene-CJ235_06505;Dbxref=NCBI_GP:PMC18917.1;Name=PMC18917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472817.1;locus_tag=CJ235_06505;product=AEC family transporter;protein_id=PMC18917.1;transl_table=11 PNGG01000003.1 Genbank gene 32907 33716 . - . ID=gene-CJ235_06510;Name=CJ235_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06510 PNGG01000003.1 Protein Homology CDS 32907 33716 . - 0 ID=cds-PMC18918.1;Parent=gene-CJ235_06510;Dbxref=NCBI_GP:PMC18918.1;Name=PMC18918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472803.1;locus_tag=CJ235_06510;product=CHAP domain-containing protein;protein_id=PMC18918.1;transl_table=11 PNGG01000003.1 Genbank gene 34199 37261 . - . ID=gene-CJ235_06515;Name=CJ235_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06515 PNGG01000003.1 Protein Homology CDS 34199 37261 . - 0 ID=cds-PMC18919.1;Parent=gene-CJ235_06515;Dbxref=NCBI_GP:PMC18919.1;Name=PMC18919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=CJ235_06515;product=hypothetical protein;protein_id=PMC18919.1;transl_table=11 PNGG01000003.1 Genbank gene 37352 38947 . - . ID=gene-CJ235_06520;Name=CJ235_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06520 PNGG01000003.1 Protein Homology CDS 37352 38947 . - 0 ID=cds-PMC18920.1;Parent=gene-CJ235_06520;Dbxref=NCBI_GP:PMC18920.1;Name=PMC18920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168;locus_tag=CJ235_06520;product=hypothetical protein;protein_id=PMC18920.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 39628 41640 . + . ID=gene-CJ235_06525;Name=CJ235_06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_06525;pseudo=true PNGG01000003.1 Protein Homology CDS 39628 41640 . + 0 ID=cds-CJ235_06525;Parent=gene-CJ235_06525;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451101.1;locus_tag=CJ235_06525;product=glutamate ligase;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 41659 42630 . + . ID=gene-CJ235_06530;Name=CJ235_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06530 PNGG01000003.1 Protein Homology CDS 41659 42630 . + 0 ID=cds-PMC19163.1;Parent=gene-CJ235_06530;Dbxref=NCBI_GP:PMC19163.1;Name=PMC19163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465873.1;locus_tag=CJ235_06530;product=glycosyltransferase family 2 protein;protein_id=PMC19163.1;transl_table=11 PNGG01000003.1 Genbank gene 42885 49514 . - . ID=gene-CJ235_06535;Name=CJ235_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06535 PNGG01000003.1 Protein Homology CDS 42885 49514 . - 0 ID=cds-PMC18921.1;Parent=gene-CJ235_06535;Dbxref=NCBI_GP:PMC18921.1;Name=PMC18921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765950.1;locus_tag=CJ235_06535;product=hypothetical protein;protein_id=PMC18921.1;transl_table=11 PNGG01000003.1 Genbank gene 50063 50764 . - . ID=gene-CJ235_06540;Name=CJ235_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06540 PNGG01000003.1 Protein Homology CDS 50063 50764 . - 0 ID=cds-PMC18922.1;Parent=gene-CJ235_06540;Dbxref=NCBI_GP:PMC18922.1;Name=PMC18922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13273.4;locus_tag=CJ235_06540;product=DUF4064 domain-containing protein;protein_id=PMC18922.1;transl_table=11 PNGG01000003.1 Genbank gene 50860 51333 . - . ID=gene-CJ235_06545;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CJ235_06545 PNGG01000003.1 Protein Homology CDS 50860 51333 . - 0 ID=cds-PMC18923.1;Parent=gene-CJ235_06545;Dbxref=NCBI_GP:PMC18923.1;Name=PMC18923.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479092.1;locus_tag=CJ235_06545;product=peptide-methionine (S)-S-oxide reductase;protein_id=PMC18923.1;transl_table=11 PNGG01000003.1 Genbank gene 51581 51847 . + . ID=gene-CJ235_06550;Name=CJ235_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06550 PNGG01000003.1 Protein Homology CDS 51581 51847 . + 0 ID=cds-PMC18924.1;Parent=gene-CJ235_06550;Dbxref=NCBI_GP:PMC18924.1;Name=PMC18924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472660.1;locus_tag=CJ235_06550;product=hypothetical protein;protein_id=PMC18924.1;transl_table=11 PNGG01000003.1 Genbank gene 52030 53232 . - . ID=gene-CJ235_06555;Name=CJ235_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06555 PNGG01000003.1 Protein Homology CDS 52030 53232 . - 0 ID=cds-PMC18925.1;Parent=gene-CJ235_06555;Dbxref=NCBI_GP:PMC18925.1;Name=PMC18925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464361.1;locus_tag=CJ235_06555;product=multidrug transporter MdtG;protein_id=PMC18925.1;transl_table=11 PNGG01000003.1 Genbank gene 53639 53902 . + . ID=gene-CJ235_06560;Name=CJ235_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06560 PNGG01000003.1 Protein Homology CDS 53639 53902 . + 0 ID=cds-PMC18926.1;Parent=gene-CJ235_06560;Dbxref=NCBI_GP:PMC18926.1;Name=PMC18926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472676.1;locus_tag=CJ235_06560;product=hypothetical protein;protein_id=PMC18926.1;transl_table=11 PNGG01000003.1 Genbank gene 53929 54141 . - . ID=gene-CJ235_06565;Name=CJ235_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06565 PNGG01000003.1 Protein Homology CDS 53929 54141 . - 0 ID=cds-PMC18927.1;Parent=gene-CJ235_06565;Dbxref=NCBI_GP:PMC18927.1;Name=PMC18927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472659.1;locus_tag=CJ235_06565;product=hypothetical protein;protein_id=PMC18927.1;transl_table=11 PNGG01000003.1 Genbank gene 54895 55143 . + . ID=gene-CJ235_06570;Name=CJ235_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06570 PNGG01000003.1 GeneMarkS+ CDS 54895 55143 . + 0 ID=cds-PMC18928.1;Parent=gene-CJ235_06570;Dbxref=NCBI_GP:PMC18928.1;Name=PMC18928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06570;product=hypothetical protein;protein_id=PMC18928.1;transl_table=11 PNGG01000003.1 Genbank gene 55299 55799 . + . ID=gene-CJ235_06575;Name=CJ235_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06575 PNGG01000003.1 Protein Homology CDS 55299 55799 . + 0 ID=cds-PMC18929.1;Parent=gene-CJ235_06575;Dbxref=NCBI_GP:PMC18929.1;Name=PMC18929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08279.10;locus_tag=CJ235_06575;product=HTH domain-containing protein;protein_id=PMC18929.1;transl_table=11 PNGG01000003.1 Genbank gene 55906 56862 . + . ID=gene-CJ235_06580;Name=CJ235_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06580 PNGG01000003.1 GeneMarkS+ CDS 55906 56862 . + 0 ID=cds-PMC18930.1;Parent=gene-CJ235_06580;Dbxref=NCBI_GP:PMC18930.1;Name=PMC18930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06580;product=hypothetical protein;protein_id=PMC18930.1;transl_table=11 PNGG01000003.1 Genbank gene 56882 57619 . + . ID=gene-CJ235_06585;Name=CJ235_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06585 PNGG01000003.1 GeneMarkS+ CDS 56882 57619 . + 0 ID=cds-PMC18931.1;Parent=gene-CJ235_06585;Dbxref=NCBI_GP:PMC18931.1;Name=PMC18931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06585;product=hypothetical protein;protein_id=PMC18931.1;transl_table=11 PNGG01000003.1 Genbank gene 57657 57953 . + . ID=gene-CJ235_06590;Name=CJ235_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06590 PNGG01000003.1 GeneMarkS+ CDS 57657 57953 . + 0 ID=cds-PMC18932.1;Parent=gene-CJ235_06590;Dbxref=NCBI_GP:PMC18932.1;Name=PMC18932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06590;product=hypothetical protein;protein_id=PMC18932.1;transl_table=11 PNGG01000003.1 Genbank gene 58124 58408 . + . ID=gene-CJ235_06595;Name=CJ235_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06595 PNGG01000003.1 GeneMarkS+ CDS 58124 58408 . + 0 ID=cds-PMC18933.1;Parent=gene-CJ235_06595;Dbxref=NCBI_GP:PMC18933.1;Name=PMC18933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06595;product=hypothetical protein;protein_id=PMC18933.1;transl_table=11 PNGG01000003.1 Genbank gene 58557 59927 . - . ID=gene-CJ235_06600;Name=CJ235_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06600 PNGG01000003.1 Protein Homology CDS 58557 59927 . - 0 ID=cds-PMC18934.1;Parent=gene-CJ235_06600;Dbxref=NCBI_GP:PMC18934.1;Name=PMC18934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_089413701.1;locus_tag=CJ235_06600;product=hypothetical protein;protein_id=PMC18934.1;transl_table=11 PNGG01000003.1 Genbank gene 60150 60815 . - . ID=gene-CJ235_06605;Name=CJ235_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06605 PNGG01000003.1 Protein Homology CDS 60150 60815 . - 0 ID=cds-PMC18935.1;Parent=gene-CJ235_06605;Dbxref=NCBI_GP:PMC18935.1;Name=PMC18935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274491.1;locus_tag=CJ235_06605;product=ABC transporter ATP-binding protein;protein_id=PMC18935.1;transl_table=11 PNGG01000003.1 Genbank gene 60828 61877 . - . ID=gene-CJ235_06610;Name=CJ235_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06610 PNGG01000003.1 Protein Homology CDS 60828 61877 . - 0 ID=cds-PMC18936.1;Parent=gene-CJ235_06610;Dbxref=NCBI_GP:PMC18936.1;Name=PMC18936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472664.1;locus_tag=CJ235_06610;product=ABC transporter permease;protein_id=PMC18936.1;transl_table=11 PNGG01000003.1 Genbank gene 61903 62271 . - . ID=gene-CJ235_06615;Name=CJ235_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06615 PNGG01000003.1 Protein Homology CDS 61903 62271 . - 0 ID=cds-PMC18937.1;Parent=gene-CJ235_06615;Dbxref=NCBI_GP:PMC18937.1;Name=PMC18937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466029.1;locus_tag=CJ235_06615;product=DUF1722 domain-containing protein;protein_id=PMC18937.1;transl_table=11 PNGG01000003.1 Genbank gene 62400 62825 . + . ID=gene-CJ235_06620;Name=CJ235_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06620 PNGG01000003.1 Protein Homology CDS 62400 62825 . + 0 ID=cds-PMC18938.1;Parent=gene-CJ235_06620;Dbxref=NCBI_GP:PMC18938.1;Name=PMC18938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510649.1;locus_tag=CJ235_06620;product=pyridoxamine 5-phosphate oxidase;protein_id=PMC18938.1;transl_table=11 PNGG01000003.1 Genbank gene 62965 63231 . - . ID=gene-CJ235_06625;Name=CJ235_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06625 PNGG01000003.1 Protein Homology CDS 62965 63231 . - 0 ID=cds-PMC18939.1;Parent=gene-CJ235_06625;Dbxref=NCBI_GP:PMC18939.1;Name=PMC18939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166972.1;locus_tag=CJ235_06625;product=zinc ribbon domain-containing protein;protein_id=PMC18939.1;transl_table=11 PNGG01000003.1 Genbank gene 63231 64424 . - . ID=gene-CJ235_06630;Name=CJ235_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06630 PNGG01000003.1 Protein Homology CDS 63231 64424 . - 0 ID=cds-PMC18940.1;Parent=gene-CJ235_06630;Dbxref=NCBI_GP:PMC18940.1;Name=PMC18940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383466.1;locus_tag=CJ235_06630;product=acetamidase/formamidase family protein;protein_id=PMC18940.1;transl_table=11 PNGG01000003.1 Genbank gene 65215 65445 . + . ID=gene-CJ235_06635;Name=CJ235_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06635 PNGG01000003.1 Protein Homology CDS 65215 65445 . + 0 ID=cds-PMC18941.1;Parent=gene-CJ235_06635;Dbxref=NCBI_GP:PMC18941.1;Name=PMC18941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482074.1;locus_tag=CJ235_06635;product=hypothetical protein;protein_id=PMC18941.1;transl_table=11 PNGG01000003.1 Genbank gene 65631 66836 . + . ID=gene-CJ235_06640;Name=CJ235_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06640 PNGG01000003.1 Protein Homology CDS 65631 66836 . + 0 ID=cds-PMC18942.1;Parent=gene-CJ235_06640;Dbxref=NCBI_GP:PMC18942.1;Name=PMC18942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472648.1;locus_tag=CJ235_06640;product=glycosyl transferase;protein_id=PMC18942.1;transl_table=11 PNGG01000003.1 Genbank gene 66955 67317 . - . ID=gene-CJ235_06645;Name=CJ235_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06645 PNGG01000003.1 Protein Homology CDS 66955 67317 . - 0 ID=cds-PMC18943.1;Parent=gene-CJ235_06645;Dbxref=NCBI_GP:PMC18943.1;Name=PMC18943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472650.1;locus_tag=CJ235_06645;product=hypothetical protein;protein_id=PMC18943.1;transl_table=11 PNGG01000003.1 Genbank gene 67589 68257 . - . ID=gene-CJ235_06650;Name=CJ235_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06650 PNGG01000003.1 Protein Homology CDS 67589 68257 . - 0 ID=cds-PMC18944.1;Parent=gene-CJ235_06650;Dbxref=NCBI_GP:PMC18944.1;Name=PMC18944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017000391.1;locus_tag=CJ235_06650;product=methyltransferase;protein_id=PMC18944.1;transl_table=11 PNGG01000003.1 Genbank gene 68324 69931 . - . ID=gene-CJ235_06655;Name=CJ235_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06655 PNGG01000003.1 Protein Homology CDS 68324 69931 . - 0 ID=cds-PMC18945.1;Parent=gene-CJ235_06655;Dbxref=NCBI_GP:PMC18945.1;Name=PMC18945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472681.1;locus_tag=CJ235_06655;product=FMN-binding glutamate synthase family protein;protein_id=PMC18945.1;transl_table=11 PNGG01000003.1 Genbank gene 70396 71526 . - . ID=gene-CJ235_06660;Name=CJ235_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06660 PNGG01000003.1 Protein Homology CDS 70396 71526 . - 0 ID=cds-PMC18946.1;Parent=gene-CJ235_06660;Dbxref=NCBI_GP:PMC18946.1;Name=PMC18946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01546.26;locus_tag=CJ235_06660;product=peptidase M20;protein_id=PMC18946.1;transl_table=11 PNGG01000003.1 Genbank gene 71536 72357 . - . ID=gene-CJ235_06665;Name=CJ235_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06665 PNGG01000003.1 Protein Homology CDS 71536 72357 . - 0 ID=cds-PMC18947.1;Parent=gene-CJ235_06665;Dbxref=NCBI_GP:PMC18947.1;Name=PMC18947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01380.20;locus_tag=CJ235_06665;product=MurR/RpiR family transcriptional regulator;protein_id=PMC18947.1;transl_table=11 PNGG01000003.1 Genbank gene 72370 73245 . - . ID=gene-CJ235_06670;Name=CJ235_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06670 PNGG01000003.1 Protein Homology CDS 72370 73245 . - 0 ID=cds-PMC18948.1;Parent=gene-CJ235_06670;Dbxref=NCBI_GP:PMC18948.1;Name=PMC18948.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04952.12;locus_tag=CJ235_06670;product=hypothetical protein;protein_id=PMC18948.1;transl_table=11 PNGG01000003.1 Genbank gene 73273 74637 . - . ID=gene-CJ235_06675;Name=CJ235_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06675 PNGG01000003.1 Protein Homology CDS 73273 74637 . - 0 ID=cds-PMC19164.1;Parent=gene-CJ235_06675;Dbxref=NCBI_GP:PMC19164.1;Name=PMC19164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425822.1;locus_tag=CJ235_06675;product=YfcC family protein;protein_id=PMC19164.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 75004 75726 . + . ID=gene-CJ235_06680;Name=CJ235_06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_06680;pseudo=true PNGG01000003.1 Protein Homology CDS 75004 75726 . + 0 ID=cds-CJ235_06680;Parent=gene-CJ235_06680;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930777.1;locus_tag=CJ235_06680;product=acetylornithine deacetylase;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 76115 77113 . - . ID=gene-CJ235_06685;Name=CJ235_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06685 PNGG01000003.1 Protein Homology CDS 76115 77113 . - 0 ID=cds-PMC18949.1;Parent=gene-CJ235_06685;Dbxref=NCBI_GP:PMC18949.1;Name=PMC18949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472651.1;locus_tag=CJ235_06685;product=thiamine/molybdopterin biosynthesis protein;protein_id=PMC18949.1;transl_table=11 PNGG01000003.1 Genbank gene 77113 77880 . - . ID=gene-CJ235_06690;Name=CJ235_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06690 PNGG01000003.1 Protein Homology CDS 77113 77880 . - 0 ID=cds-PMC18950.1;Parent=gene-CJ235_06690;Dbxref=NCBI_GP:PMC18950.1;Name=PMC18950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765615.1;locus_tag=CJ235_06690;product=thiazole synthase;protein_id=PMC18950.1;transl_table=11 PNGG01000003.1 Genbank gene 77882 78082 . - . ID=gene-CJ235_06695;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CJ235_06695 PNGG01000003.1 Protein Homology CDS 77882 78082 . - 0 ID=cds-PMC18951.1;Parent=gene-CJ235_06695;Dbxref=NCBI_GP:PMC18951.1;Name=PMC18951.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444251.1;locus_tag=CJ235_06695;product=thiamine biosynthesis protein ThiS;protein_id=PMC18951.1;transl_table=11 PNGG01000003.1 Genbank gene 78066 79184 . - . ID=gene-CJ235_06700;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CJ235_06700 PNGG01000003.1 Protein Homology CDS 78066 79184 . - 0 ID=cds-PMC18952.1;Parent=gene-CJ235_06700;Dbxref=NCBI_GP:PMC18952.1;Name=PMC18952.1;gbkey=CDS;gene=thiO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472654.1;locus_tag=CJ235_06700;product=glycine oxidase ThiO;protein_id=PMC18952.1;transl_table=11 PNGG01000003.1 Genbank gene 79177 79659 . - . ID=gene-CJ235_06705;Name=CJ235_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06705 PNGG01000003.1 Protein Homology CDS 79177 79659 . - 0 ID=cds-PMC19165.1;Parent=gene-CJ235_06705;Dbxref=NCBI_GP:PMC19165.1;Name=PMC19165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02581.15;locus_tag=CJ235_06705;product=thiamine phosphate synthase;protein_id=PMC19165.1;transl_table=11 PNGG01000003.1 cmsearch riboswitch 79835 79944 . - . ID=id-PNGG01000003.1:79835..79944;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000003.1 Genbank gene 80035 81528 . - . ID=gene-CJ235_06710;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CJ235_06710 PNGG01000003.1 Protein Homology CDS 80035 81528 . - 0 ID=cds-PMC18953.1;Parent=gene-CJ235_06710;Dbxref=NCBI_GP:PMC18953.1;Name=PMC18953.1;gbkey=CDS;gene=xylB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472672.1;locus_tag=CJ235_06710;product=xylulokinase;protein_id=PMC18953.1;transl_table=11 PNGG01000003.1 Genbank gene 81988 82941 . + . ID=gene-CJ235_06715;Name=CJ235_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06715 PNGG01000003.1 Protein Homology CDS 81988 82941 . + 0 ID=cds-PMC19166.1;Parent=gene-CJ235_06715;Dbxref=NCBI_GP:PMC19166.1;Name=PMC19166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511668.1;locus_tag=CJ235_06715;product=rhodanese domain-containing protein;protein_id=PMC19166.1;transl_table=11 PNGG01000003.1 Genbank gene 83216 83851 . - . ID=gene-CJ235_06720;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CJ235_06720 PNGG01000003.1 Protein Homology CDS 83216 83851 . - 0 ID=cds-PMC18954.1;Parent=gene-CJ235_06720;Dbxref=NCBI_GP:PMC18954.1;Name=PMC18954.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=CJ235_06720;product=pyroglutamyl-peptidase I;protein_id=PMC18954.1;transl_table=11 PNGG01000003.1 Genbank gene 83883 84809 . - . ID=gene-CJ235_06725;Name=CJ235_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06725 PNGG01000003.1 Protein Homology CDS 83883 84809 . - 0 ID=cds-PMC18955.1;Parent=gene-CJ235_06725;Dbxref=NCBI_GP:PMC18955.1;Name=PMC18955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274623.1;locus_tag=CJ235_06725;product=DUF979 domain-containing protein;protein_id=PMC18955.1;transl_table=11 PNGG01000003.1 Genbank gene 84802 85512 . - . ID=gene-CJ235_06730;Name=CJ235_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06730 PNGG01000003.1 Protein Homology CDS 84802 85512 . - 0 ID=cds-PMC18956.1;Parent=gene-CJ235_06730;Dbxref=NCBI_GP:PMC18956.1;Name=PMC18956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472679.1;locus_tag=CJ235_06730;product=DUF969 domain-containing protein;protein_id=PMC18956.1;transl_table=11 PNGG01000003.1 Genbank gene 85698 85895 . - . ID=gene-CJ235_06735;Name=CJ235_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06735 PNGG01000003.1 GeneMarkS+ CDS 85698 85895 . - 0 ID=cds-PMC18957.1;Parent=gene-CJ235_06735;Dbxref=NCBI_GP:PMC18957.1;Name=PMC18957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06735;product=hypothetical protein;protein_id=PMC18957.1;transl_table=11 PNGG01000003.1 Genbank gene 85923 86522 . - . ID=gene-CJ235_06740;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CJ235_06740 PNGG01000003.1 Protein Homology CDS 85923 86522 . - 0 ID=cds-PMC18958.1;Parent=gene-CJ235_06740;Dbxref=NCBI_GP:PMC18958.1;Name=PMC18958.1;gbkey=CDS;gene=cysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765729.1;locus_tag=CJ235_06740;product=adenylyl-sulfate kinase;protein_id=PMC18958.1;transl_table=11 PNGG01000003.1 Genbank gene 86541 87719 . - . ID=gene-CJ235_06745;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=CJ235_06745 PNGG01000003.1 Protein Homology CDS 86541 87719 . - 0 ID=cds-PMC18959.1;Parent=gene-CJ235_06745;Dbxref=NCBI_GP:PMC18959.1;Name=PMC18959.1;gbkey=CDS;gene=sat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765730.1;locus_tag=CJ235_06745;product=sulfate adenylyltransferase;protein_id=PMC18959.1;transl_table=11 PNGG01000003.1 Genbank gene 87724 88620 . - . ID=gene-CJ235_06750;Name=CJ235_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06750 PNGG01000003.1 Protein Homology CDS 87724 88620 . - 0 ID=cds-PMC18960.1;Parent=gene-CJ235_06750;Dbxref=NCBI_GP:PMC18960.1;Name=PMC18960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492395.1;locus_tag=CJ235_06750;product=sulfite exporter TauE/SafE family protein;protein_id=PMC18960.1;transl_table=11 PNGG01000003.1 Genbank gene 88645 89259 . - . ID=gene-CJ235_06755;Name=CJ235_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06755 PNGG01000003.1 Protein Homology CDS 88645 89259 . - 0 ID=cds-PMC18961.1;Parent=gene-CJ235_06755;Dbxref=NCBI_GP:PMC18961.1;Name=PMC18961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PRK06718.1;locus_tag=CJ235_06755;product=precorrin-2 dehydrogenase;protein_id=PMC18961.1;transl_table=11 PNGG01000003.1 Genbank gene 89318 90091 . - . ID=gene-CJ235_06760;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CJ235_06760 PNGG01000003.1 Protein Homology CDS 89318 90091 . - 0 ID=cds-PMC18962.1;Parent=gene-CJ235_06760;Dbxref=NCBI_GP:PMC18962.1;Name=PMC18962.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465384.1;locus_tag=CJ235_06760;product=uroporphyrinogen-III C-methyltransferase;protein_id=PMC18962.1;transl_table=11 PNGG01000003.1 Genbank gene 90107 91843 . - . ID=gene-CJ235_06765;Name=CJ235_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06765 PNGG01000003.1 Protein Homology CDS 90107 91843 . - 0 ID=cds-PMC18963.1;Parent=gene-CJ235_06765;Dbxref=NCBI_GP:PMC18963.1;Name=PMC18963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472639.1;locus_tag=CJ235_06765;product=NADPH-dependent assimilatory sulfite reductase hemoprotein subunit;protein_id=PMC18963.1;transl_table=11 PNGG01000003.1 Genbank gene 91861 93720 . - . ID=gene-CJ235_06770;Name=CJ235_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06770 PNGG01000003.1 Protein Homology CDS 91861 93720 . - 0 ID=cds-PMC18964.1;Parent=gene-CJ235_06770;Dbxref=NCBI_GP:PMC18964.1;Name=PMC18964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472662.1;locus_tag=CJ235_06770;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=PMC18964.1;transl_table=11 PNGG01000003.1 Genbank gene 93870 94595 . - . ID=gene-CJ235_06775;Name=CJ235_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06775 PNGG01000003.1 Protein Homology CDS 93870 94595 . - 0 ID=cds-PMC18965.1;Parent=gene-CJ235_06775;Dbxref=NCBI_GP:PMC18965.1;Name=PMC18965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959306.1;locus_tag=CJ235_06775;product=phosphoadenylyl-sulfate reductase;protein_id=PMC18965.1;transl_table=11 PNGG01000003.1 Genbank gene 94879 95448 . - . ID=gene-CJ235_06780;Name=CJ235_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06780 PNGG01000003.1 Protein Homology CDS 94879 95448 . - 0 ID=cds-PMC18966.1;Parent=gene-CJ235_06780;Dbxref=NCBI_GP:PMC18966.1;Name=PMC18966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13273.4;locus_tag=CJ235_06780;product=DUF4064 domain-containing protein;protein_id=PMC18966.1;transl_table=11 PNGG01000003.1 Genbank gene 95587 96441 . - . ID=gene-CJ235_06785;Name=CJ235_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06785 PNGG01000003.1 Protein Homology CDS 95587 96441 . - 0 ID=cds-PMC18967.1;Parent=gene-CJ235_06785;Dbxref=NCBI_GP:PMC18967.1;Name=PMC18967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472673.1;locus_tag=CJ235_06785;product=2-dehydropantoate 2-reductase;protein_id=PMC18967.1;transl_table=11 PNGG01000003.1 Genbank gene 96512 97330 . + . ID=gene-CJ235_06790;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CJ235_06790 PNGG01000003.1 Protein Homology CDS 96512 97330 . + 0 ID=cds-PMC18968.1;Parent=gene-CJ235_06790;Dbxref=NCBI_GP:PMC18968.1;Name=PMC18968.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431941.1;locus_tag=CJ235_06790;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=PMC18968.1;transl_table=11 PNGG01000003.1 Genbank gene 97323 98165 . + . ID=gene-CJ235_06795;Name=CJ235_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06795 PNGG01000003.1 Protein Homology CDS 97323 98165 . + 0 ID=cds-PMC18969.1;Parent=gene-CJ235_06795;Dbxref=NCBI_GP:PMC18969.1;Name=PMC18969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174742.1;locus_tag=CJ235_06795;product=pantoate--beta-alanine ligase;protein_id=PMC18969.1;transl_table=11 PNGG01000003.1 Genbank gene 98363 107998 . - . ID=gene-CJ235_06800;Name=CJ235_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06800 PNGG01000003.1 Protein Homology CDS 98363 107998 . - 0 ID=cds-PMC18970.1;Parent=gene-CJ235_06800;Dbxref=NCBI_GP:PMC18970.1;Name=PMC18970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19%2CHMM:TIGR01168;locus_tag=CJ235_06800;product=hypothetical protein;protein_id=PMC18970.1;transl_table=11 PNGG01000003.1 Genbank gene 108556 109599 . - . ID=gene-CJ235_06805;Name=CJ235_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06805 PNGG01000003.1 Protein Homology CDS 108556 109599 . - 0 ID=cds-PMC18971.1;Parent=gene-CJ235_06805;Dbxref=NCBI_GP:PMC18971.1;Name=PMC18971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472094.1;locus_tag=CJ235_06805;product=sensor histidine kinase;protein_id=PMC18971.1;transl_table=11 PNGG01000003.1 Genbank gene 109600 110283 . - . ID=gene-CJ235_06810;Name=CJ235_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06810 PNGG01000003.1 Protein Homology CDS 109600 110283 . - 0 ID=cds-PMC18972.1;Parent=gene-CJ235_06810;Dbxref=NCBI_GP:PMC18972.1;Name=PMC18972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472079.1;locus_tag=CJ235_06810;product=DNA-binding response regulator;protein_id=PMC18972.1;transl_table=11 PNGG01000003.1 Genbank gene 110261 110722 . - . ID=gene-CJ235_06815;Name=CJ235_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06815 PNGG01000003.1 Protein Homology CDS 110261 110722 . - 0 ID=cds-PMC18973.1;Parent=gene-CJ235_06815;Dbxref=NCBI_GP:PMC18973.1;Name=PMC18973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472099.1;locus_tag=CJ235_06815;product=DoxX family membrane protein;protein_id=PMC18973.1;transl_table=11 PNGG01000003.1 Genbank gene 110866 111324 . - . ID=gene-CJ235_06820;Name=CJ235_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06820 PNGG01000003.1 Protein Homology CDS 110866 111324 . - 0 ID=cds-PMC18974.1;Parent=gene-CJ235_06820;Dbxref=NCBI_GP:PMC18974.1;Name=PMC18974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479118.1;locus_tag=CJ235_06820;product=hypothetical protein;protein_id=PMC18974.1;transl_table=11 PNGG01000003.1 Genbank gene 111596 111919 . + . ID=gene-CJ235_06825;Name=CJ235_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06825 PNGG01000003.1 Protein Homology CDS 111596 111919 . + 0 ID=cds-PMC18975.1;Parent=gene-CJ235_06825;Dbxref=NCBI_GP:PMC18975.1;Name=PMC18975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999234.1;locus_tag=CJ235_06825;product=PadR family transcriptional regulator;protein_id=PMC18975.1;transl_table=11 PNGG01000003.1 Genbank gene 111912 112472 . + . ID=gene-CJ235_06830;Name=CJ235_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06830 PNGG01000003.1 Protein Homology CDS 111912 112472 . + 0 ID=cds-PMC18976.1;Parent=gene-CJ235_06830;Dbxref=NCBI_GP:PMC18976.1;Name=PMC18976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472075.1;locus_tag=CJ235_06830;product=hypothetical protein;protein_id=PMC18976.1;transl_table=11 PNGG01000003.1 Genbank gene 112433 113260 . + . ID=gene-CJ235_06835;Name=CJ235_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06835 PNGG01000003.1 Protein Homology CDS 112433 113260 . + 0 ID=cds-PMC18977.1;Parent=gene-CJ235_06835;Dbxref=NCBI_GP:PMC18977.1;Name=PMC18977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13349.4;locus_tag=CJ235_06835;product=hypothetical protein;protein_id=PMC18977.1;transl_table=11 PNGG01000003.1 Genbank gene 113466 114149 . - . ID=gene-CJ235_06840;Name=CJ235_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06840 PNGG01000003.1 Protein Homology CDS 113466 114149 . - 0 ID=cds-PMC18978.1;Parent=gene-CJ235_06840;Dbxref=NCBI_GP:PMC18978.1;Name=PMC18978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472102.1;locus_tag=CJ235_06840;product=6-carboxyhexanoate--CoA ligase;protein_id=PMC18978.1;transl_table=11 PNGG01000003.1 Genbank gene 114142 115275 . - . ID=gene-CJ235_06845;Name=CJ235_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06845 PNGG01000003.1 Protein Homology CDS 114142 115275 . - 0 ID=cds-PMC18979.1;Parent=gene-CJ235_06845;Dbxref=NCBI_GP:PMC18979.1;Name=PMC18979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763736.1;locus_tag=CJ235_06845;product=8-amino-7-oxononanoate synthase;protein_id=PMC18979.1;transl_table=11 PNGG01000003.1 Genbank gene 115294 116661 . - . ID=gene-CJ235_06850;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CJ235_06850 PNGG01000003.1 Protein Homology CDS 115294 116661 . - 0 ID=cds-PMC18980.1;Parent=gene-CJ235_06850;Dbxref=NCBI_GP:PMC18980.1;Name=PMC18980.1;gbkey=CDS;gene=bioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472101.1;locus_tag=CJ235_06850;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=PMC18980.1;transl_table=11 PNGG01000003.1 Genbank gene 116642 117331 . - . ID=gene-CJ235_06855;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CJ235_06855 PNGG01000003.1 Protein Homology CDS 116642 117331 . - 0 ID=cds-PMC18981.1;Parent=gene-CJ235_06855;Dbxref=NCBI_GP:PMC18981.1;Name=PMC18981.1;gbkey=CDS;gene=bioD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425930.1;locus_tag=CJ235_06855;product=dethiobiotin synthase;protein_id=PMC18981.1;transl_table=11 PNGG01000003.1 Genbank gene 117536 118069 . - . ID=gene-CJ235_06860;Name=CJ235_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06860 PNGG01000003.1 GeneMarkS+ CDS 117536 118069 . - 0 ID=cds-PMC18982.1;Parent=gene-CJ235_06860;Dbxref=NCBI_GP:PMC18982.1;Name=PMC18982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06860;product=hypothetical protein;protein_id=PMC18982.1;transl_table=11 PNGG01000003.1 Genbank gene 118138 119490 . - . ID=gene-CJ235_06865;Name=CJ235_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06865 PNGG01000003.1 Protein Homology CDS 118138 119490 . - 0 ID=cds-PMC19167.1;Parent=gene-CJ235_06865;Dbxref=NCBI_GP:PMC19167.1;Name=PMC19167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472097.1;locus_tag=CJ235_06865;product=YqeG family HAD IIIA-type phosphatase;protein_id=PMC19167.1;transl_table=11 PNGG01000003.1 Genbank gene 119649 120332 . + . ID=gene-CJ235_06870;Name=CJ235_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06870 PNGG01000003.1 Protein Homology CDS 119649 120332 . + 0 ID=cds-PMC18983.1;Parent=gene-CJ235_06870;Dbxref=NCBI_GP:PMC18983.1;Name=PMC18983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472076.1;locus_tag=CJ235_06870;product=hypothetical protein;protein_id=PMC18983.1;transl_table=11 PNGG01000003.1 Genbank gene 120427 121275 . - . ID=gene-CJ235_06875;Name=CJ235_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06875 PNGG01000003.1 Protein Homology CDS 120427 121275 . - 0 ID=cds-PMC18984.1;Parent=gene-CJ235_06875;Dbxref=NCBI_GP:PMC18984.1;Name=PMC18984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432918.1;locus_tag=CJ235_06875;product=YitT family protein;protein_id=PMC18984.1;transl_table=11 PNGG01000003.1 Genbank gene 121594 122157 . - . ID=gene-CJ235_06880;Name=CJ235_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06880 PNGG01000003.1 Protein Homology CDS 121594 122157 . - 0 ID=cds-PMC18985.1;Parent=gene-CJ235_06880;Dbxref=NCBI_GP:PMC18985.1;Name=PMC18985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13273.4;locus_tag=CJ235_06880;product=DUF4064 domain-containing protein;protein_id=PMC18985.1;transl_table=11 PNGG01000003.1 Genbank gene 122334 123632 . + . ID=gene-CJ235_06885;Name=CJ235_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06885 PNGG01000003.1 Protein Homology CDS 122334 123632 . + 0 ID=cds-PMC18986.1;Parent=gene-CJ235_06885;Dbxref=NCBI_GP:PMC18986.1;Name=PMC18986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472090.1;locus_tag=CJ235_06885;product=PrsW family intramembrane metalloprotease;protein_id=PMC18986.1;transl_table=11 PNGG01000003.1 Genbank gene 123676 124569 . - . ID=gene-CJ235_06890;Name=CJ235_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06890 PNGG01000003.1 Protein Homology CDS 123676 124569 . - 0 ID=cds-PMC18987.1;Parent=gene-CJ235_06890;Dbxref=NCBI_GP:PMC18987.1;Name=PMC18987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13273.4;locus_tag=CJ235_06890;product=DUF4064 domain-containing protein;protein_id=PMC18987.1;transl_table=11 PNGG01000003.1 cmsearch riboswitch 124804 124903 . + . ID=id-PNGG01000003.1:124804..124903;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000003.1 Genbank gene 125023 125772 . + . ID=gene-CJ235_06895;Name=CJ235_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06895 PNGG01000003.1 Protein Homology CDS 125023 125772 . + 0 ID=cds-PMC18988.1;Parent=gene-CJ235_06895;Dbxref=NCBI_GP:PMC18988.1;Name=PMC18988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019390925.1;locus_tag=CJ235_06895;product=3-oxoacyl-ACP reductase;protein_id=PMC18988.1;transl_table=11 PNGG01000003.1 Genbank gene 125887 127182 . + . ID=gene-CJ235_06900;Name=CJ235_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06900 PNGG01000003.1 Protein Homology CDS 125887 127182 . + 0 ID=cds-PMC18989.1;Parent=gene-CJ235_06900;Dbxref=NCBI_GP:PMC18989.1;Name=PMC18989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472071.1;locus_tag=CJ235_06900;product=LLM class flavin-dependent oxidoreductase;protein_id=PMC18989.1;transl_table=11 PNGG01000003.1 Genbank gene 127594 128793 . + . ID=gene-CJ235_06905;Name=CJ235_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06905 PNGG01000003.1 Protein Homology CDS 127594 128793 . + 0 ID=cds-PMC18990.1;Parent=gene-CJ235_06905;Dbxref=NCBI_GP:PMC18990.1;Name=PMC18990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274473.1;locus_tag=CJ235_06905;product=GTP-binding protein;protein_id=PMC18990.1;transl_table=11 PNGG01000003.1 Genbank gene 128893 130629 . - . ID=gene-CJ235_06910;Name=CJ235_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06910 PNGG01000003.1 Protein Homology CDS 128893 130629 . - 0 ID=cds-PMC18991.1;Parent=gene-CJ235_06910;Dbxref=NCBI_GP:PMC18991.1;Name=PMC18991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04464.12;locus_tag=CJ235_06910;product=hypothetical protein;protein_id=PMC18991.1;transl_table=11 PNGG01000003.1 Genbank gene 131175 134264 . + . ID=gene-CJ235_06915;Name=CJ235_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06915 PNGG01000003.1 Protein Homology CDS 131175 134264 . + 0 ID=cds-PMC18992.1;Parent=gene-CJ235_06915;Dbxref=NCBI_GP:PMC18992.1;Name=PMC18992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168;locus_tag=CJ235_06915;product=hypothetical protein;protein_id=PMC18992.1;transl_table=11 PNGG01000003.1 Genbank gene 134553 134894 . - . ID=gene-CJ235_06920;Name=CJ235_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06920 PNGG01000003.1 GeneMarkS+ CDS 134553 134894 . - 0 ID=cds-PMC18993.1;Parent=gene-CJ235_06920;Dbxref=NCBI_GP:PMC18993.1;Name=PMC18993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06920;product=hypothetical protein;protein_id=PMC18993.1;transl_table=11 PNGG01000003.1 Genbank gene 135184 135336 . - . ID=gene-CJ235_06925;Name=CJ235_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06925 PNGG01000003.1 Protein Homology CDS 135184 135336 . - 0 ID=cds-PMC18994.1;Parent=gene-CJ235_06925;Dbxref=NCBI_GP:PMC18994.1;Name=PMC18994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763732.1;locus_tag=CJ235_06925;product=beta-class phenol-soluble modulin;protein_id=PMC18994.1;transl_table=11 PNGG01000003.1 Genbank gene 135623 137497 . + . ID=gene-CJ235_06930;Name=CJ235_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06930 PNGG01000003.1 Protein Homology CDS 135623 137497 . + 0 ID=cds-PMC18995.1;Parent=gene-CJ235_06930;Dbxref=NCBI_GP:PMC18995.1;Name=PMC18995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00874.18%2CHMM:PF05043.11%2CHMM:PF08279.10;locus_tag=CJ235_06930;product=PRD domain-containing protein;protein_id=PMC18995.1;transl_table=11 PNGG01000003.1 Genbank gene 137576 139708 . + . ID=gene-CJ235_06935;Name=CJ235_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06935 PNGG01000003.1 Protein Homology CDS 137576 139708 . + 0 ID=cds-PMC18996.1;Parent=gene-CJ235_06935;Dbxref=NCBI_GP:PMC18996.1;Name=PMC18996.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472104.1;locus_tag=CJ235_06935;product=PTS mannose transporter subunit IIABC;protein_id=PMC18996.1;transl_table=11 PNGG01000003.1 Genbank gene 139736 140671 . + . ID=gene-CJ235_06940;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CJ235_06940 PNGG01000003.1 Protein Homology CDS 139736 140671 . + 0 ID=cds-PMC18997.1;Parent=gene-CJ235_06940;Dbxref=NCBI_GP:PMC18997.1;Name=PMC18997.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472080.1;locus_tag=CJ235_06940;product=mannose-6-phosphate isomerase%2C class I;protein_id=PMC18997.1;transl_table=11 PNGG01000003.1 Genbank gene 140751 140945 . - . ID=gene-CJ235_06945;Name=CJ235_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06945 PNGG01000003.1 Protein Homology CDS 140751 140945 . - 0 ID=cds-PMC18998.1;Parent=gene-CJ235_06945;Dbxref=NCBI_GP:PMC18998.1;Name=PMC18998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425455.1;locus_tag=CJ235_06945;product=hypothetical protein;protein_id=PMC18998.1;transl_table=11 PNGG01000003.1 Genbank gene 141394 142086 . - . ID=gene-CJ235_06950;Name=CJ235_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06950 PNGG01000003.1 Protein Homology CDS 141394 142086 . - 0 ID=cds-PMC18999.1;Parent=gene-CJ235_06950;Dbxref=NCBI_GP:PMC18999.1;Name=PMC18999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167;locus_tag=CJ235_06950;product=hypothetical protein;protein_id=PMC18999.1;transl_table=11 PNGG01000003.1 Genbank gene 142204 142458 . - . ID=gene-CJ235_06955;Name=CJ235_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06955 PNGG01000003.1 Protein Homology CDS 142204 142458 . - 0 ID=cds-PMC19000.1;Parent=gene-CJ235_06955;Dbxref=NCBI_GP:PMC19000.1;Name=PMC19000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810401.1;locus_tag=CJ235_06955;product=hypothetical protein;protein_id=PMC19000.1;transl_table=11 PNGG01000003.1 Genbank gene 142818 143249 . - . ID=gene-CJ235_06960;Name=CJ235_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06960 PNGG01000003.1 Protein Homology CDS 142818 143249 . - 0 ID=cds-PMC19001.1;Parent=gene-CJ235_06960;Dbxref=NCBI_GP:PMC19001.1;Name=PMC19001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05656.12;locus_tag=CJ235_06960;product=DUF805 domain-containing protein;protein_id=PMC19001.1;transl_table=11 PNGG01000003.1 Genbank gene 145172 145645 . + . ID=gene-CJ235_06965;Name=CJ235_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06965 PNGG01000003.1 Protein Homology CDS 145172 145645 . + 0 ID=cds-PMC19002.1;Parent=gene-CJ235_06965;Dbxref=NCBI_GP:PMC19002.1;Name=PMC19002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473109.1;locus_tag=CJ235_06965;product=DNA repair protein RadC;protein_id=PMC19002.1;transl_table=11 PNGG01000003.1 Genbank gene 145965 146492 . - . ID=gene-CJ235_06970;Name=CJ235_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06970 PNGG01000003.1 GeneMarkS+ CDS 145965 146492 . - 0 ID=cds-PMC19003.1;Parent=gene-CJ235_06970;Dbxref=NCBI_GP:PMC19003.1;Name=PMC19003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06970;product=hypothetical protein;protein_id=PMC19003.1;transl_table=11 PNGG01000003.1 Genbank gene 146516 147475 . - . ID=gene-CJ235_06975;Name=CJ235_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06975 PNGG01000003.1 GeneMarkS+ CDS 146516 147475 . - 0 ID=cds-PMC19004.1;Parent=gene-CJ235_06975;Dbxref=NCBI_GP:PMC19004.1;Name=PMC19004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_06975;product=hypothetical protein;protein_id=PMC19004.1;transl_table=11 PNGG01000003.1 Genbank gene 147924 149147 . - . ID=gene-CJ235_06980;Name=CJ235_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06980 PNGG01000003.1 Protein Homology CDS 147924 149147 . - 0 ID=cds-PMC19005.1;Parent=gene-CJ235_06980;Dbxref=NCBI_GP:PMC19005.1;Name=PMC19005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=CJ235_06980;product=restriction endonuclease subunit S;protein_id=PMC19005.1;transl_table=11 PNGG01000003.1 Genbank gene 149140 150696 . - . ID=gene-CJ235_06985;Name=CJ235_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06985 PNGG01000003.1 Protein Homology CDS 149140 150696 . - 0 ID=cds-PMC19006.1;Parent=gene-CJ235_06985;Dbxref=NCBI_GP:PMC19006.1;Name=PMC19006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464589.1;locus_tag=CJ235_06985;product=type I restriction-modification system subunit M;protein_id=PMC19006.1;transl_table=11 PNGG01000003.1 Genbank gene 150711 151274 . - . ID=gene-CJ235_06990;Name=CJ235_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06990 PNGG01000003.1 Protein Homology CDS 150711 151274 . - 0 ID=cds-PMC19007.1;Parent=gene-CJ235_06990;Dbxref=NCBI_GP:PMC19007.1;Name=PMC19007.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=CJ235_06990;product=restriction endonuclease subunit S;protein_id=PMC19007.1;transl_table=11 PNGG01000003.1 Genbank gene 151383 154175 . - . ID=gene-CJ235_06995;Name=CJ235_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_06995 PNGG01000003.1 Protein Homology CDS 151383 154175 . - 0 ID=cds-PMC19008.1;Parent=gene-CJ235_06995;Dbxref=NCBI_GP:PMC19008.1;Name=PMC19008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331353.1;locus_tag=CJ235_06995;product=type I restriction endonuclease subunit R;protein_id=PMC19008.1;transl_table=11 PNGG01000003.1 Genbank gene 154355 155011 . - . ID=gene-CJ235_07000;Name=CJ235_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07000 PNGG01000003.1 Protein Homology CDS 154355 155011 . - 0 ID=cds-PMC19009.1;Parent=gene-CJ235_07000;Dbxref=NCBI_GP:PMC19009.1;Name=PMC19009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004035466.1;locus_tag=CJ235_07000;product=hypothetical protein;protein_id=PMC19009.1;transl_table=11 PNGG01000003.1 Genbank gene 155001 155705 . - . ID=gene-CJ235_07005;Name=CJ235_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07005 PNGG01000003.1 Protein Homology CDS 155001 155705 . - 0 ID=cds-PMC19010.1;Parent=gene-CJ235_07005;Dbxref=NCBI_GP:PMC19010.1;Name=PMC19010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14487.4;locus_tag=CJ235_07005;product=DUF4433 domain-containing protein;protein_id=PMC19010.1;transl_table=11 PNGG01000003.1 Genbank gene 155719 157245 . - . ID=gene-CJ235_07010;Name=CJ235_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07010 PNGG01000003.1 Protein Homology CDS 155719 157245 . - 0 ID=cds-PMC19011.1;Parent=gene-CJ235_07010;Dbxref=NCBI_GP:PMC19011.1;Name=PMC19011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13245.4;locus_tag=CJ235_07010;product=DUF2075 domain-containing protein;protein_id=PMC19011.1;transl_table=11 PNGG01000003.1 Genbank gene 157405 158115 . + . ID=gene-CJ235_07015;Name=CJ235_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07015 PNGG01000003.1 Protein Homology CDS 157405 158115 . + 0 ID=cds-PMC19012.1;Parent=gene-CJ235_07015;Dbxref=NCBI_GP:PMC19012.1;Name=PMC19012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08378.9;locus_tag=CJ235_07015;product=NERD domain-containing protein;protein_id=PMC19012.1;transl_table=11 PNGG01000003.1 Genbank gene 158184 159386 . - . ID=gene-CJ235_07020;Name=CJ235_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07020 PNGG01000003.1 Protein Homology CDS 158184 159386 . - 0 ID=cds-PMC19013.1;Parent=gene-CJ235_07020;Dbxref=NCBI_GP:PMC19013.1;Name=PMC19013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498883.1;locus_tag=CJ235_07020;product=NupC/NupG family nucleoside CNT transporter;protein_id=PMC19013.1;transl_table=11 PNGG01000003.1 Genbank gene 159396 160307 . - . ID=gene-CJ235_07025;Name=CJ235_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07025 PNGG01000003.1 Protein Homology CDS 159396 160307 . - 0 ID=cds-PMC19014.1;Parent=gene-CJ235_07025;Dbxref=NCBI_GP:PMC19014.1;Name=PMC19014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492513.1;locus_tag=CJ235_07025;product=pseudouridine-5'-phosphate glycosidase;protein_id=PMC19014.1;transl_table=11 PNGG01000003.1 Genbank gene 160291 161400 . - . ID=gene-CJ235_07030;Name=CJ235_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07030 PNGG01000003.1 Protein Homology CDS 160291 161400 . - 0 ID=cds-PMC19015.1;Parent=gene-CJ235_07030;Dbxref=NCBI_GP:PMC19015.1;Name=PMC19015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469017.1;locus_tag=CJ235_07030;product=carbohydrate kinase;protein_id=PMC19015.1;transl_table=11 PNGG01000003.1 Genbank gene 161702 162739 . - . ID=gene-CJ235_07035;Name=CJ235_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07035 PNGG01000003.1 Protein Homology CDS 161702 162739 . - 0 ID=cds-PMC19016.1;Parent=gene-CJ235_07035;Dbxref=NCBI_GP:PMC19016.1;Name=PMC19016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449326.1;locus_tag=CJ235_07035;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=PMC19016.1;transl_table=11 PNGG01000003.1 Genbank gene 162736 164874 . - . ID=gene-CJ235_07040;Name=CJ235_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07040 PNGG01000003.1 Protein Homology CDS 162736 164874 . - 0 ID=cds-PMC19017.1;Parent=gene-CJ235_07040;Dbxref=NCBI_GP:PMC19017.1;Name=PMC19017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454614.1;locus_tag=CJ235_07040;product=GTPase;protein_id=PMC19017.1;transl_table=11 PNGG01000003.1 Genbank gene 164929 165681 . - . ID=gene-CJ235_07045;Name=CJ235_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07045 PNGG01000003.1 Protein Homology CDS 164929 165681 . - 0 ID=cds-PMC19018.1;Parent=gene-CJ235_07045;Dbxref=NCBI_GP:PMC19018.1;Name=PMC19018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302057.1;locus_tag=CJ235_07045;product=hypothetical protein;protein_id=PMC19018.1;transl_table=11 PNGG01000003.1 Genbank gene 165701 166435 . - . ID=gene-CJ235_07050;Name=CJ235_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07050 PNGG01000003.1 GeneMarkS+ CDS 165701 166435 . - 0 ID=cds-PMC19019.1;Parent=gene-CJ235_07050;Dbxref=NCBI_GP:PMC19019.1;Name=PMC19019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07050;product=hypothetical protein;protein_id=PMC19019.1;transl_table=11 PNGG01000003.1 Genbank gene 166659 166913 . - . ID=gene-CJ235_07055;Name=CJ235_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07055 PNGG01000003.1 GeneMarkS+ CDS 166659 166913 . - 0 ID=cds-PMC19020.1;Parent=gene-CJ235_07055;Dbxref=NCBI_GP:PMC19020.1;Name=PMC19020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07055;product=hypothetical protein;protein_id=PMC19020.1;transl_table=11 PNGG01000003.1 Genbank gene 167105 167431 . - . ID=gene-CJ235_07060;Name=CJ235_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07060 PNGG01000003.1 GeneMarkS+ CDS 167105 167431 . - 0 ID=cds-PMC19021.1;Parent=gene-CJ235_07060;Dbxref=NCBI_GP:PMC19021.1;Name=PMC19021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07060;product=hypothetical protein;protein_id=PMC19021.1;transl_table=11 PNGG01000003.1 Genbank gene 167521 168090 . - . ID=gene-CJ235_07065;Name=CJ235_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07065 PNGG01000003.1 GeneMarkS+ CDS 167521 168090 . - 0 ID=cds-PMC19022.1;Parent=gene-CJ235_07065;Dbxref=NCBI_GP:PMC19022.1;Name=PMC19022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07065;product=hypothetical protein;protein_id=PMC19022.1;transl_table=11 PNGG01000003.1 Genbank gene 168301 169287 . + . ID=gene-CJ235_07070;Name=CJ235_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07070 PNGG01000003.1 GeneMarkS+ CDS 168301 169287 . + 0 ID=cds-PMC19023.1;Parent=gene-CJ235_07070;Dbxref=NCBI_GP:PMC19023.1;Name=PMC19023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07070;product=hypothetical protein;protein_id=PMC19023.1;transl_table=11 PNGG01000003.1 Genbank gene 169686 170621 . - . ID=gene-CJ235_07075;Name=CJ235_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07075 PNGG01000003.1 Protein Homology CDS 169686 170621 . - 0 ID=cds-PMC19024.1;Parent=gene-CJ235_07075;Dbxref=NCBI_GP:PMC19024.1;Name=PMC19024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03547.16;locus_tag=CJ235_07075;product=hypothetical protein;protein_id=PMC19024.1;transl_table=11 PNGG01000003.1 Genbank gene 170843 171187 . - . ID=gene-CJ235_07080;Name=CJ235_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07080 PNGG01000003.1 GeneMarkS+ CDS 170843 171187 . - 0 ID=cds-PMC19025.1;Parent=gene-CJ235_07080;Dbxref=NCBI_GP:PMC19025.1;Name=PMC19025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07080;product=hypothetical protein;protein_id=PMC19025.1;transl_table=11 PNGG01000003.1 Genbank gene 171193 171960 . - . ID=gene-CJ235_07085;Name=CJ235_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07085 PNGG01000003.1 GeneMarkS+ CDS 171193 171960 . - 0 ID=cds-PMC19026.1;Parent=gene-CJ235_07085;Dbxref=NCBI_GP:PMC19026.1;Name=PMC19026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07085;product=hypothetical protein;protein_id=PMC19026.1;transl_table=11 PNGG01000003.1 Genbank gene 172227 172619 . - . ID=gene-CJ235_07090;Name=CJ235_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07090 PNGG01000003.1 Protein Homology CDS 172227 172619 . - 0 ID=cds-PMC19027.1;Parent=gene-CJ235_07090;Dbxref=NCBI_GP:PMC19027.1;Name=PMC19027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479145.1;locus_tag=CJ235_07090;product=PTS fructose transporter subunit IIA;protein_id=PMC19027.1;transl_table=11 PNGG01000003.1 Genbank gene 172892 173767 . - . ID=gene-CJ235_07095;Name=CJ235_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07095 PNGG01000003.1 Protein Homology CDS 172892 173767 . - 0 ID=cds-PMC19028.1;Parent=gene-CJ235_07095;Dbxref=NCBI_GP:PMC19028.1;Name=PMC19028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168845.1;locus_tag=CJ235_07095;product=PTS fructose transporter subunit IID;protein_id=PMC19028.1;transl_table=11 PNGG01000003.1 Genbank gene 173754 174647 . - . ID=gene-CJ235_07100;Name=CJ235_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07100 PNGG01000003.1 Protein Homology CDS 173754 174647 . - 0 ID=cds-PMC19029.1;Parent=gene-CJ235_07100;Dbxref=NCBI_GP:PMC19029.1;Name=PMC19029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017001104.1;locus_tag=CJ235_07100;product=PTS sugar transporter subunit IIC;protein_id=PMC19029.1;transl_table=11 PNGG01000003.1 Genbank gene 174787 175266 . - . ID=gene-CJ235_07105;Name=CJ235_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07105 PNGG01000003.1 Protein Homology CDS 174787 175266 . - 0 ID=cds-PMC19030.1;Parent=gene-CJ235_07105;Dbxref=NCBI_GP:PMC19030.1;Name=PMC19030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166806.1;locus_tag=CJ235_07105;product=PTS mannose/fructose/sorbose transporter subunit IIB;protein_id=PMC19030.1;transl_table=11 PNGG01000003.1 Genbank gene 175426 177222 . - . ID=gene-CJ235_07110;Name=CJ235_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07110 PNGG01000003.1 Protein Homology CDS 175426 177222 . - 0 ID=cds-PMC19168.1;Parent=gene-CJ235_07110;Dbxref=NCBI_GP:PMC19168.1;Name=PMC19168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007721905.1;locus_tag=CJ235_07110;product=beta-galactosidase;protein_id=PMC19168.1;transl_table=11 PNGG01000003.1 Genbank gene 177227 178171 . - . ID=gene-CJ235_07115;Name=CJ235_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07115 PNGG01000003.1 Protein Homology CDS 177227 178171 . - 0 ID=cds-PMC19031.1;Parent=gene-CJ235_07115;Dbxref=NCBI_GP:PMC19031.1;Name=PMC19031.1;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase%2C encoded by lacD1 and lacD2%3B expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470963.1;locus_tag=CJ235_07115;product=tagatose 1%2C6-diphosphate aldolase;protein_id=PMC19031.1;transl_table=11 PNGG01000003.1 Genbank gene 178172 179107 . - . ID=gene-CJ235_07120;Name=CJ235_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07120 PNGG01000003.1 Protein Homology CDS 178172 179107 . - 0 ID=cds-PMC19032.1;Parent=gene-CJ235_07120;Dbxref=NCBI_GP:PMC19032.1;Name=PMC19032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470959.1;locus_tag=CJ235_07120;product=tagatose-6-phosphate kinase;protein_id=PMC19032.1;transl_table=11 PNGG01000003.1 Genbank gene 179117 180229 . - . ID=gene-CJ235_07125;Name=CJ235_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07125 PNGG01000003.1 Protein Homology CDS 179117 180229 . - 0 ID=cds-PMC19033.1;Parent=gene-CJ235_07125;Dbxref=NCBI_GP:PMC19033.1;Name=PMC19033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166802.1;locus_tag=CJ235_07125;product=SIS domain-containing protein;protein_id=PMC19033.1;transl_table=11 PNGG01000003.1 Genbank gene 180525 181250 . - . ID=gene-CJ235_07130;Name=CJ235_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07130 PNGG01000003.1 Protein Homology CDS 180525 181250 . - 0 ID=cds-PMC19034.1;Parent=gene-CJ235_07130;Dbxref=NCBI_GP:PMC19034.1;Name=PMC19034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470948.1;locus_tag=CJ235_07130;product=GntR family transcriptional regulator;protein_id=PMC19034.1;transl_table=11 PNGG01000003.1 Genbank gene 181360 182025 . - . ID=gene-CJ235_07135;Name=CJ235_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07135 PNGG01000003.1 GeneMarkS+ CDS 181360 182025 . - 0 ID=cds-PMC19035.1;Parent=gene-CJ235_07135;Dbxref=NCBI_GP:PMC19035.1;Name=PMC19035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07135;product=hypothetical protein;protein_id=PMC19035.1;transl_table=11 PNGG01000003.1 Genbank gene 182098 182949 . - . ID=gene-CJ235_07140;Name=CJ235_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07140 PNGG01000003.1 GeneMarkS+ CDS 182098 182949 . - 0 ID=cds-PMC19036.1;Parent=gene-CJ235_07140;Dbxref=NCBI_GP:PMC19036.1;Name=PMC19036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07140;product=hypothetical protein;protein_id=PMC19036.1;transl_table=11 PNGG01000003.1 Genbank gene 183124 183615 . - . ID=gene-CJ235_07145;Name=CJ235_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07145 PNGG01000003.1 GeneMarkS+ CDS 183124 183615 . - 0 ID=cds-PMC19037.1;Parent=gene-CJ235_07145;Dbxref=NCBI_GP:PMC19037.1;Name=PMC19037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07145;product=hypothetical protein;protein_id=PMC19037.1;transl_table=11 PNGG01000003.1 Genbank gene 183802 184560 . + . ID=gene-CJ235_07150;Name=CJ235_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07150 PNGG01000003.1 Protein Homology CDS 183802 184560 . + 0 ID=cds-PMC19038.1;Parent=gene-CJ235_07150;Dbxref=NCBI_GP:PMC19038.1;Name=PMC19038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121756.1;locus_tag=CJ235_07150;product=3-oxoacyl-(ACP) reductase;protein_id=PMC19038.1;transl_table=11 PNGG01000003.1 Genbank gene 184841 186373 . + . ID=gene-CJ235_07155;Name=CJ235_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07155 PNGG01000003.1 Protein Homology CDS 184841 186373 . + 0 ID=cds-PMC19039.1;Parent=gene-CJ235_07155;Dbxref=NCBI_GP:PMC19039.1;Name=PMC19039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015729606.1;locus_tag=CJ235_07155;product=hypothetical protein;protein_id=PMC19039.1;transl_table=11 PNGG01000003.1 Genbank gene 186467 187309 . - . ID=gene-CJ235_07160;Name=CJ235_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07160 PNGG01000003.1 Protein Homology CDS 186467 187309 . - 0 ID=cds-PMC19040.1;Parent=gene-CJ235_07160;Dbxref=NCBI_GP:PMC19040.1;Name=PMC19040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01551.20;locus_tag=CJ235_07160;product=M23 family peptidase;protein_id=PMC19040.1;transl_table=11 PNGG01000003.1 Genbank gene 189143 189511 . + . ID=gene-CJ235_07165;Name=CJ235_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07165 PNGG01000003.1 Protein Homology CDS 189143 189511 . + 0 ID=cds-PMC19041.1;Parent=gene-CJ235_07165;Dbxref=NCBI_GP:PMC19041.1;Name=PMC19041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472325.1;locus_tag=CJ235_07165;product=hypothetical protein;protein_id=PMC19041.1;transl_table=11 PNGG01000003.1 Genbank gene 189673 190566 . + . ID=gene-CJ235_07170;Name=CJ235_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07170 PNGG01000003.1 Protein Homology CDS 189673 190566 . + 0 ID=cds-PMC19042.1;Parent=gene-CJ235_07170;Dbxref=NCBI_GP:PMC19042.1;Name=PMC19042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472314.1;locus_tag=CJ235_07170;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=PMC19042.1;transl_table=11 PNGG01000003.1 Genbank gene 190745 191596 . - . ID=gene-CJ235_07175;Name=CJ235_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07175 PNGG01000003.1 Protein Homology CDS 190745 191596 . - 0 ID=cds-PMC19043.1;Parent=gene-CJ235_07175;Dbxref=NCBI_GP:PMC19043.1;Name=PMC19043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472330.1;locus_tag=CJ235_07175;product=EamA/RhaT family transporter;protein_id=PMC19043.1;transl_table=11 PNGG01000003.1 Genbank gene 191805 192230 . - . ID=gene-CJ235_07180;Name=CJ235_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07180 PNGG01000003.1 GeneMarkS+ CDS 191805 192230 . - 0 ID=cds-PMC19044.1;Parent=gene-CJ235_07180;Dbxref=NCBI_GP:PMC19044.1;Name=PMC19044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07180;product=hypothetical protein;protein_id=PMC19044.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 192678 194305 . - . ID=gene-CJ235_07185;Name=CJ235_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_07185;pseudo=true PNGG01000003.1 Protein Homology CDS 192678 194305 . - 0 ID=cds-CJ235_07185;Parent=gene-CJ235_07185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478442.1;locus_tag=CJ235_07185;product=poly(glycerol-phosphate) alpha-glucosyltransferase;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 194477 199948 . - . ID=gene-CJ235_07190;Name=CJ235_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07190 PNGG01000003.1 Protein Homology CDS 194477 199948 . - 0 ID=cds-PMC19045.1;Parent=gene-CJ235_07190;Dbxref=NCBI_GP:PMC19045.1;Name=PMC19045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF17210.1%2CHMM:TIGR01168;locus_tag=CJ235_07190;product=hypothetical protein;protein_id=PMC19045.1;transl_table=11 PNGG01000003.1 Genbank gene 200478 201191 . + . ID=gene-CJ235_07195;Name=CJ235_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07195 PNGG01000003.1 Protein Homology CDS 200478 201191 . + 0 ID=cds-PMC19169.1;Parent=gene-CJ235_07195;Dbxref=NCBI_GP:PMC19169.1;Name=PMC19169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110238.1;locus_tag=CJ235_07195;product=MerR family transcriptional regulator;protein_id=PMC19169.1;transl_table=11 PNGG01000003.1 Genbank gene 201300 202361 . - . ID=gene-CJ235_07200;Name=CJ235_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07200 PNGG01000003.1 Protein Homology CDS 201300 202361 . - 0 ID=cds-PMC19046.1;Parent=gene-CJ235_07200;Dbxref=NCBI_GP:PMC19046.1;Name=PMC19046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472312.1;locus_tag=CJ235_07200;product=LLM class flavin-dependent oxidoreductase;protein_id=PMC19046.1;transl_table=11 PNGG01000003.1 Genbank gene 202648 204342 . + . ID=gene-CJ235_07205;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CJ235_07205 PNGG01000003.1 Protein Homology CDS 202648 204342 . + 0 ID=cds-PMC19047.1;Parent=gene-CJ235_07205;Dbxref=NCBI_GP:PMC19047.1;Name=PMC19047.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472323.1;locus_tag=CJ235_07205;product=dihydroxy-acid dehydratase;protein_id=PMC19047.1;transl_table=11 PNGG01000003.1 Genbank gene 204432 204635 . - . ID=gene-CJ235_07210;Name=CJ235_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07210 PNGG01000003.1 GeneMarkS+ CDS 204432 204635 . - 0 ID=cds-PMC19048.1;Parent=gene-CJ235_07210;Dbxref=NCBI_GP:PMC19048.1;Name=PMC19048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07210;product=hypothetical protein;protein_id=PMC19048.1;transl_table=11 PNGG01000003.1 Genbank gene 204733 205158 . - . ID=gene-CJ235_07215;Name=CJ235_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07215 PNGG01000003.1 Protein Homology CDS 204733 205158 . - 0 ID=cds-PMC19049.1;Parent=gene-CJ235_07215;Dbxref=NCBI_GP:PMC19049.1;Name=PMC19049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472313.1;locus_tag=CJ235_07215;product=MarR family transcriptional regulator;protein_id=PMC19049.1;transl_table=11 PNGG01000003.1 Genbank gene 205324 206175 . + . ID=gene-CJ235_07220;Name=CJ235_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07220 PNGG01000003.1 Protein Homology CDS 205324 206175 . + 0 ID=cds-PMC19050.1;Parent=gene-CJ235_07220;Dbxref=NCBI_GP:PMC19050.1;Name=PMC19050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472331.1;locus_tag=CJ235_07220;product=NAD(P)-dependent oxidoreductase;protein_id=PMC19050.1;transl_table=11 PNGG01000003.1 Genbank gene 206361 206711 . + . ID=gene-CJ235_07225;Name=CJ235_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07225 PNGG01000003.1 Protein Homology CDS 206361 206711 . + 0 ID=cds-PMC19051.1;Parent=gene-CJ235_07225;Dbxref=NCBI_GP:PMC19051.1;Name=PMC19051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466697.1;locus_tag=CJ235_07225;product=hypothetical protein;protein_id=PMC19051.1;transl_table=11 PNGG01000003.1 Genbank gene 206904 207941 . - . ID=gene-CJ235_07230;Name=CJ235_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07230 PNGG01000003.1 Protein Homology CDS 206904 207941 . - 0 ID=cds-PMC19052.1;Parent=gene-CJ235_07230;Dbxref=NCBI_GP:PMC19052.1;Name=PMC19052.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08402.8;locus_tag=CJ235_07230;product=ABC transporter ATP-binding protein;protein_id=PMC19052.1;transl_table=11 PNGG01000003.1 Genbank gene 207907 209520 . - . ID=gene-CJ235_07235;Name=CJ235_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07235 PNGG01000003.1 Protein Homology CDS 207907 209520 . - 0 ID=cds-PMC19053.1;Parent=gene-CJ235_07235;Dbxref=NCBI_GP:PMC19053.1;Name=PMC19053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472311.1;locus_tag=CJ235_07235;product=iron ABC transporter permease;protein_id=PMC19053.1;transl_table=11 PNGG01000003.1 Genbank gene 209523 210554 . - . ID=gene-CJ235_07240;Name=CJ235_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07240 PNGG01000003.1 Protein Homology CDS 209523 210554 . - 0 ID=cds-PMC19054.1;Parent=gene-CJ235_07240;Dbxref=NCBI_GP:PMC19054.1;Name=PMC19054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13416.4;locus_tag=CJ235_07240;product=iron ABC transporter substrate-binding protein;protein_id=PMC19054.1;transl_table=11 PNGG01000003.1 Genbank gene 210713 211468 . - . ID=gene-CJ235_07245;Name=CJ235_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07245 PNGG01000003.1 Protein Homology CDS 210713 211468 . - 0 ID=cds-PMC19055.1;Parent=gene-CJ235_07245;Dbxref=NCBI_GP:PMC19055.1;Name=PMC19055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001792407.1;locus_tag=CJ235_07245;product=methyltransferase domain-containing protein;protein_id=PMC19055.1;transl_table=11 PNGG01000003.1 Genbank gene 211900 213378 . + . ID=gene-CJ235_07250;Name=CJ235_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07250 PNGG01000003.1 Protein Homology CDS 211900 213378 . + 0 ID=cds-PMC19056.1;Parent=gene-CJ235_07250;Dbxref=NCBI_GP:PMC19056.1;Name=PMC19056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483391.1;locus_tag=CJ235_07250;product=catalase;protein_id=PMC19056.1;transl_table=11 PNGG01000003.1 Genbank gene 213623 213949 . + . ID=gene-CJ235_07255;Name=CJ235_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07255 PNGG01000003.1 Protein Homology CDS 213623 213949 . + 0 ID=cds-PMC19057.1;Parent=gene-CJ235_07255;Dbxref=NCBI_GP:PMC19057.1;Name=PMC19057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472322.1;locus_tag=CJ235_07255;product=hypothetical protein;protein_id=PMC19057.1;transl_table=11 PNGG01000003.1 Genbank gene 214149 214403 . + . ID=gene-CJ235_07260;Name=CJ235_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07260 PNGG01000003.1 Protein Homology CDS 214149 214403 . + 0 ID=cds-PMC19058.1;Parent=gene-CJ235_07260;Dbxref=NCBI_GP:PMC19058.1;Name=PMC19058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508597.1;locus_tag=CJ235_07260;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=PMC19058.1;transl_table=11 PNGG01000003.1 Genbank gene 214614 216317 . - . ID=gene-CJ235_07265;Name=CJ235_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07265 PNGG01000003.1 Protein Homology CDS 214614 216317 . - 0 ID=cds-PMC19059.1;Parent=gene-CJ235_07265;Dbxref=NCBI_GP:PMC19059.1;Name=PMC19059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511742.1;locus_tag=CJ235_07265;product=ATPase;protein_id=PMC19059.1;transl_table=11 PNGG01000003.1 Genbank gene 216484 217653 . + . ID=gene-CJ235_07270;Name=CJ235_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07270 PNGG01000003.1 Protein Homology CDS 216484 217653 . + 0 ID=cds-PMC19060.1;Parent=gene-CJ235_07270;Dbxref=NCBI_GP:PMC19060.1;Name=PMC19060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471948.1;locus_tag=CJ235_07270;product=amidohydrolase;protein_id=PMC19060.1;transl_table=11 PNGG01000003.1 Genbank gene 217754 218929 . + . ID=gene-CJ235_07275;Name=CJ235_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07275 PNGG01000003.1 Protein Homology CDS 217754 218929 . + 0 ID=cds-PMC19061.1;Parent=gene-CJ235_07275;Dbxref=NCBI_GP:PMC19061.1;Name=PMC19061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471983.1;locus_tag=CJ235_07275;product=amidohydrolase;protein_id=PMC19061.1;transl_table=11 PNGG01000003.1 Genbank gene 218984 220348 . + . ID=gene-CJ235_07280;Name=CJ235_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07280 PNGG01000003.1 Protein Homology CDS 218984 220348 . + 0 ID=cds-PMC19062.1;Parent=gene-CJ235_07280;Dbxref=NCBI_GP:PMC19062.1;Name=PMC19062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471968.1;locus_tag=CJ235_07280;product=glutamine synthetase;protein_id=PMC19062.1;transl_table=11 PNGG01000003.1 Genbank gene 220407 221042 . - . ID=gene-CJ235_07285;Name=CJ235_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07285 PNGG01000003.1 Protein Homology CDS 220407 221042 . - 0 ID=cds-PMC19063.1;Parent=gene-CJ235_07285;Dbxref=NCBI_GP:PMC19063.1;Name=PMC19063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471961.1;locus_tag=CJ235_07285;product=ABC-2 transporter permease;protein_id=PMC19063.1;transl_table=11 PNGG01000003.1 Genbank gene 221042 221884 . - . ID=gene-CJ235_07290;Name=CJ235_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07290 PNGG01000003.1 Protein Homology CDS 221042 221884 . - 0 ID=cds-PMC19064.1;Parent=gene-CJ235_07290;Dbxref=NCBI_GP:PMC19064.1;Name=PMC19064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471986.1;locus_tag=CJ235_07290;product=ABC transporter ATP-binding protein;protein_id=PMC19064.1;transl_table=11 PNGG01000003.1 Genbank gene 221900 222604 . - . ID=gene-CJ235_07295;Name=CJ235_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07295 PNGG01000003.1 Protein Homology CDS 221900 222604 . - 0 ID=cds-PMC19170.1;Parent=gene-CJ235_07295;Dbxref=NCBI_GP:PMC19170.1;Name=PMC19170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471974.1;locus_tag=CJ235_07295;product=DUF3169 domain-containing protein;protein_id=PMC19170.1;transl_table=11 PNGG01000003.1 Genbank gene 222619 222822 . - . ID=gene-CJ235_07300;Name=CJ235_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07300 PNGG01000003.1 Protein Homology CDS 222619 222822 . - 0 ID=cds-PMC19065.1;Parent=gene-CJ235_07300;Dbxref=NCBI_GP:PMC19065.1;Name=PMC19065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=CJ235_07300;product=transcriptional regulator;protein_id=PMC19065.1;transl_table=11 PNGG01000003.1 Genbank gene 223116 223997 . + . ID=gene-CJ235_07305;Name=CJ235_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07305 PNGG01000003.1 GeneMarkS+ CDS 223116 223997 . + 0 ID=cds-PMC19066.1;Parent=gene-CJ235_07305;Dbxref=NCBI_GP:PMC19066.1;Name=PMC19066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07305;product=hypothetical protein;protein_id=PMC19066.1;transl_table=11 PNGG01000003.1 Genbank gene 224183 224560 . - . ID=gene-CJ235_07310;Name=CJ235_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07310 PNGG01000003.1 Protein Homology CDS 224183 224560 . - 0 ID=cds-PMC19067.1;Parent=gene-CJ235_07310;Dbxref=NCBI_GP:PMC19067.1;Name=PMC19067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454486.1;locus_tag=CJ235_07310;product=DUF3139 domain-containing protein;protein_id=PMC19067.1;transl_table=11 PNGG01000003.1 Genbank gene 224663 225382 . + . ID=gene-CJ235_07315;Name=CJ235_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07315 PNGG01000003.1 Protein Homology CDS 224663 225382 . + 0 ID=cds-PMC19068.1;Parent=gene-CJ235_07315;Dbxref=NCBI_GP:PMC19068.1;Name=PMC19068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05708.10;locus_tag=CJ235_07315;product=hypothetical protein;protein_id=PMC19068.1;transl_table=11 PNGG01000003.1 Genbank gene 225540 226322 . - . ID=gene-CJ235_07320;Name=CJ235_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07320 PNGG01000003.1 Protein Homology CDS 225540 226322 . - 0 ID=cds-PMC19069.1;Parent=gene-CJ235_07320;Dbxref=NCBI_GP:PMC19069.1;Name=PMC19069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274539.1;locus_tag=CJ235_07320;product=3-oxoacyl-ACP reductase;protein_id=PMC19069.1;transl_table=11 PNGG01000003.1 Genbank gene 226315 227544 . - . ID=gene-CJ235_07325;Name=CJ235_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07325 PNGG01000003.1 Protein Homology CDS 226315 227544 . - 0 ID=cds-PMC19171.1;Parent=gene-CJ235_07325;Dbxref=NCBI_GP:PMC19171.1;Name=PMC19171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015880124.1;locus_tag=CJ235_07325;product=MFS transporter;protein_id=PMC19171.1;transl_table=11 PNGG01000003.1 Genbank gene 227595 229217 . - . ID=gene-CJ235_07330;Name=CJ235_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07330 PNGG01000003.1 Protein Homology CDS 227595 229217 . - 0 ID=cds-PMC19070.1;Parent=gene-CJ235_07330;Dbxref=NCBI_GP:PMC19070.1;Name=PMC19070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471950.1;locus_tag=CJ235_07330;product=ATPase;protein_id=PMC19070.1;transl_table=11 PNGG01000003.1 Genbank gene 229470 230120 . - . ID=gene-CJ235_07335;Name=CJ235_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07335 PNGG01000003.1 Protein Homology CDS 229470 230120 . - 0 ID=cds-PMC19071.1;Parent=gene-CJ235_07335;Dbxref=NCBI_GP:PMC19071.1;Name=PMC19071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454217.1;locus_tag=CJ235_07335;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=PMC19071.1;transl_table=11 PNGG01000003.1 Genbank gene 230238 231491 . - . ID=gene-CJ235_07340;Name=CJ235_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07340 PNGG01000003.1 GeneMarkS+ CDS 230238 231491 . - 0 ID=cds-PMC19072.1;Parent=gene-CJ235_07340;Dbxref=NCBI_GP:PMC19072.1;Name=PMC19072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07340;product=hypothetical protein;protein_id=PMC19072.1;transl_table=11 PNGG01000003.1 Genbank gene 231430 232098 . - . ID=gene-CJ235_07345;Name=CJ235_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07345 PNGG01000003.1 GeneMarkS+ CDS 231430 232098 . - 0 ID=cds-PMC19073.1;Parent=gene-CJ235_07345;Dbxref=NCBI_GP:PMC19073.1;Name=PMC19073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07345;product=hypothetical protein;protein_id=PMC19073.1;transl_table=11 PNGG01000003.1 Genbank gene 232403 233437 . - . ID=gene-CJ235_07350;Name=CJ235_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07350 PNGG01000003.1 Protein Homology CDS 232403 233437 . - 0 ID=cds-PMC19074.1;Parent=gene-CJ235_07350;Dbxref=NCBI_GP:PMC19074.1;Name=PMC19074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00535.24;locus_tag=CJ235_07350;product=glycosyltransferase family 2 protein;protein_id=PMC19074.1;transl_table=11 PNGG01000003.1 Genbank gene 233434 234891 . - . ID=gene-CJ235_07355;Name=CJ235_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07355 PNGG01000003.1 Protein Homology CDS 233434 234891 . - 0 ID=cds-PMC19075.1;Parent=gene-CJ235_07355;Dbxref=NCBI_GP:PMC19075.1;Name=PMC19075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492493.1;locus_tag=CJ235_07355;product=phytoene desaturase;protein_id=PMC19075.1;transl_table=11 PNGG01000003.1 Genbank gene 234896 235750 . - . ID=gene-CJ235_07360;Name=CJ235_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07360 PNGG01000003.1 Protein Homology CDS 234896 235750 . - 0 ID=cds-PMC19076.1;Parent=gene-CJ235_07360;Dbxref=NCBI_GP:PMC19076.1;Name=PMC19076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00494.17;locus_tag=CJ235_07360;product=phytoene synthase;protein_id=PMC19076.1;transl_table=11 PNGG01000003.1 Genbank gene 235722 237233 . - . ID=gene-CJ235_07365;Name=CJ235_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07365 PNGG01000003.1 Protein Homology CDS 235722 237233 . - 0 ID=cds-PMC19077.1;Parent=gene-CJ235_07365;Dbxref=NCBI_GP:PMC19077.1;Name=PMC19077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471976.1;locus_tag=CJ235_07365;product=phytoene desaturase;protein_id=PMC19077.1;transl_table=11 PNGG01000003.1 Genbank gene 237373 237849 . - . ID=gene-CJ235_07370;Name=CJ235_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07370 PNGG01000003.1 GeneMarkS+ CDS 237373 237849 . - 0 ID=cds-PMC19078.1;Parent=gene-CJ235_07370;Dbxref=NCBI_GP:PMC19078.1;Name=PMC19078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07370;product=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;protein_id=PMC19078.1;transl_table=11 PNGG01000003.1 Genbank gene 238103 238534 . - . ID=gene-CJ235_07375;Name=CJ235_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07375 PNGG01000003.1 GeneMarkS+ CDS 238103 238534 . - 0 ID=cds-PMC19079.1;Parent=gene-CJ235_07375;Dbxref=NCBI_GP:PMC19079.1;Name=PMC19079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07375;product=hypothetical protein;protein_id=PMC19079.1;transl_table=11 PNGG01000003.1 Genbank gene 238564 238875 . - . ID=gene-CJ235_07380;Name=CJ235_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07380 PNGG01000003.1 GeneMarkS+ CDS 238564 238875 . - 0 ID=cds-PMC19080.1;Parent=gene-CJ235_07380;Dbxref=NCBI_GP:PMC19080.1;Name=PMC19080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07380;product=hypothetical protein;protein_id=PMC19080.1;transl_table=11 PNGG01000003.1 Genbank gene 238868 239206 . - . ID=gene-CJ235_07385;Name=CJ235_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07385 PNGG01000003.1 GeneMarkS+ CDS 238868 239206 . - 0 ID=cds-PMC19081.1;Parent=gene-CJ235_07385;Dbxref=NCBI_GP:PMC19081.1;Name=PMC19081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07385;product=hypothetical protein;protein_id=PMC19081.1;transl_table=11 PNGG01000003.1 Genbank gene 239351 240289 . - . ID=gene-CJ235_07390;Name=CJ235_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07390 PNGG01000003.1 Protein Homology CDS 239351 240289 . - 0 ID=cds-PMC19082.1;Parent=gene-CJ235_07390;Dbxref=NCBI_GP:PMC19082.1;Name=PMC19082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07859.11;locus_tag=CJ235_07390;product=alpha/beta hydrolase;protein_id=PMC19082.1;transl_table=11 PNGG01000003.1 Genbank gene 240553 241344 . + . ID=gene-CJ235_07395;Name=CJ235_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07395 PNGG01000003.1 Protein Homology CDS 240553 241344 . + 0 ID=cds-PMC19083.1;Parent=gene-CJ235_07395;Dbxref=NCBI_GP:PMC19083.1;Name=PMC19083.1;Note=Converts glucose to D-glucono-1%2C5 lactone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931147.1;locus_tag=CJ235_07395;product=3-oxoacyl-ACP reductase;protein_id=PMC19083.1;transl_table=11 PNGG01000003.1 Genbank gene 241534 243102 . + . ID=gene-CJ235_07400;Name=CJ235_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07400 PNGG01000003.1 Protein Homology CDS 241534 243102 . + 0 ID=cds-PMC19084.1;Parent=gene-CJ235_07400;Dbxref=NCBI_GP:PMC19084.1;Name=PMC19084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506646.1;locus_tag=CJ235_07400;product=BCCT family transporter;protein_id=PMC19084.1;transl_table=11 PNGG01000003.1 Genbank gene 243160 243708 . - . ID=gene-CJ235_07405;Name=CJ235_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07405 PNGG01000003.1 Protein Homology CDS 243160 243708 . - 0 ID=cds-PMC19085.1;Parent=gene-CJ235_07405;Dbxref=NCBI_GP:PMC19085.1;Name=PMC19085.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=CJ235_07405;product=TetR/AcrR family transcriptional regulator;protein_id=PMC19085.1;transl_table=11 PNGG01000003.1 Genbank gene 244183 245112 . - . ID=gene-CJ235_07410;Name=CJ235_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07410 PNGG01000003.1 Protein Homology CDS 244183 245112 . - 0 ID=cds-PMC19086.1;Parent=gene-CJ235_07410;Dbxref=NCBI_GP:PMC19086.1;Name=PMC19086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834761.1;locus_tag=CJ235_07410;product=ABC transporter substrate-binding protein;protein_id=PMC19086.1;transl_table=11 PNGG01000003.1 Genbank gene 245134 247866 . - . ID=gene-CJ235_07415;Name=CJ235_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07415 PNGG01000003.1 Protein Homology CDS 245134 247866 . - 0 ID=cds-PMC19087.1;Parent=gene-CJ235_07415;Dbxref=NCBI_GP:PMC19087.1;Name=PMC19087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471945.1;locus_tag=CJ235_07415;product=MMPL family transporter;protein_id=PMC19087.1;transl_table=11 PNGG01000003.1 Genbank gene 248225 248671 . + . ID=gene-CJ235_07420;Name=CJ235_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07420 PNGG01000003.1 Protein Homology CDS 248225 248671 . + 0 ID=cds-PMC19088.1;Parent=gene-CJ235_07420;Dbxref=NCBI_GP:PMC19088.1;Name=PMC19088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425893.1;locus_tag=CJ235_07420;product=MarR family transcriptional regulator;protein_id=PMC19088.1;transl_table=11 PNGG01000003.1 Genbank gene 248688 249167 . + . ID=gene-CJ235_07425;Name=CJ235_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07425 PNGG01000003.1 Protein Homology CDS 248688 249167 . + 0 ID=cds-PMC19089.1;Parent=gene-CJ235_07425;Dbxref=NCBI_GP:PMC19089.1;Name=PMC19089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506336.1;locus_tag=CJ235_07425;product=glutathione peroxidase;protein_id=PMC19089.1;transl_table=11 PNGG01000003.1 Genbank gene 249405 249620 . + . ID=gene-CJ235_07430;Name=CJ235_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07430 PNGG01000003.1 GeneMarkS+ CDS 249405 249620 . + 0 ID=cds-PMC19090.1;Parent=gene-CJ235_07430;Dbxref=NCBI_GP:PMC19090.1;Name=PMC19090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07430;product=hypothetical protein;protein_id=PMC19090.1;transl_table=11 PNGG01000003.1 Genbank gene 249856 250215 . - . ID=gene-CJ235_07435;Name=CJ235_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07435 PNGG01000003.1 Protein Homology CDS 249856 250215 . - 0 ID=cds-PMC19091.1;Parent=gene-CJ235_07435;Dbxref=NCBI_GP:PMC19091.1;Name=PMC19091.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03830;locus_tag=CJ235_07435;product=transcriptional regulator;protein_id=PMC19091.1;transl_table=11 PNGG01000003.1 Genbank gene 251105 252088 . - . ID=gene-CJ235_07440;Name=CJ235_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07440 PNGG01000003.1 Protein Homology CDS 251105 252088 . - 0 ID=cds-PMC19092.1;Parent=gene-CJ235_07440;Dbxref=NCBI_GP:PMC19092.1;Name=PMC19092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016911993.1;locus_tag=CJ235_07440;product=iron ABC transporter permease;protein_id=PMC19092.1;transl_table=11 PNGG01000003.1 Genbank gene 252085 253083 . - . ID=gene-CJ235_07445;Name=CJ235_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07445 PNGG01000003.1 Protein Homology CDS 252085 253083 . - 0 ID=cds-PMC19093.1;Parent=gene-CJ235_07445;Dbxref=NCBI_GP:PMC19093.1;Name=PMC19093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471975.1;locus_tag=CJ235_07445;product=iron ABC transporter permease;protein_id=PMC19093.1;transl_table=11 PNGG01000003.1 Genbank gene 253073 254014 . - . ID=gene-CJ235_07450;Name=CJ235_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07450 PNGG01000003.1 Protein Homology CDS 253073 254014 . - 0 ID=cds-PMC19094.1;Parent=gene-CJ235_07450;Dbxref=NCBI_GP:PMC19094.1;Name=PMC19094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471954.1;locus_tag=CJ235_07450;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=PMC19094.1;transl_table=11 PNGG01000003.1 Genbank gene 254110 255234 . - . ID=gene-CJ235_07455;Name=CJ235_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07455 PNGG01000003.1 Protein Homology CDS 254110 255234 . - 0 ID=cds-PMC19095.1;Parent=gene-CJ235_07455;Dbxref=NCBI_GP:PMC19095.1;Name=PMC19095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471979.1;locus_tag=CJ235_07455;product=pyridoxal-dependent decarboxylase%2C pyridoxal-binding domain protein;protein_id=PMC19095.1;transl_table=11 PNGG01000003.1 Genbank gene 255221 256384 . - . ID=gene-CJ235_07460;Name=CJ235_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07460 PNGG01000003.1 Protein Homology CDS 255221 256384 . - 0 ID=cds-PMC19096.1;Parent=gene-CJ235_07460;Dbxref=NCBI_GP:PMC19096.1;Name=PMC19096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471978.1;locus_tag=CJ235_07460;product=MFS transporter;protein_id=PMC19096.1;transl_table=11 PNGG01000003.1 Genbank gene 256371 258056 . - . ID=gene-CJ235_07465;Name=CJ235_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07465 PNGG01000003.1 Protein Homology CDS 256371 258056 . - 0 ID=cds-PMC19097.1;Parent=gene-CJ235_07465;Dbxref=NCBI_GP:PMC19097.1;Name=PMC19097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471971.1;locus_tag=CJ235_07465;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=PMC19097.1;transl_table=11 PNGG01000003.1 Genbank gene 258044 259618 . - . ID=gene-CJ235_07470;Name=CJ235_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07470 PNGG01000003.1 Protein Homology CDS 258044 259618 . - 0 ID=cds-PMC19098.1;Parent=gene-CJ235_07470;Dbxref=NCBI_GP:PMC19098.1;Name=PMC19098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471966.1;locus_tag=CJ235_07470;product=siderophore biosynthesis protein%2C IucA/IucC family;protein_id=PMC19098.1;transl_table=11 PNGG01000003.1 Genbank gene 259842 260771 . - . ID=gene-CJ235_07475;Name=CJ235_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07475 PNGG01000003.1 Protein Homology CDS 259842 260771 . - 0 ID=cds-PMC19099.1;Parent=gene-CJ235_07475;Dbxref=NCBI_GP:PMC19099.1;Name=PMC19099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471959.1;locus_tag=CJ235_07475;product=ferrichrome ABC transporter substrate-binding protein;protein_id=PMC19099.1;transl_table=11 PNGG01000003.1 Genbank gene 260768 261604 . - . ID=gene-CJ235_07480;Name=CJ235_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07480 PNGG01000003.1 Protein Homology CDS 260768 261604 . - 0 ID=cds-PMC19100.1;Parent=gene-CJ235_07480;Dbxref=NCBI_GP:PMC19100.1;Name=PMC19100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04072.12;locus_tag=CJ235_07480;product=class I SAM-dependent methyltransferase;protein_id=PMC19100.1;transl_table=11 PNGG01000003.1 Genbank gene 261714 262406 . + . ID=gene-CJ235_07485;Name=CJ235_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07485 PNGG01000003.1 Protein Homology CDS 261714 262406 . + 0 ID=cds-PMC19101.1;Parent=gene-CJ235_07485;Dbxref=NCBI_GP:PMC19101.1;Name=PMC19101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471965.1;locus_tag=CJ235_07485;product=alpha/beta hydrolase;protein_id=PMC19101.1;transl_table=11 PNGG01000003.1 Genbank gene 262618 263595 . - . ID=gene-CJ235_07490;Name=CJ235_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07490 PNGG01000003.1 GeneMarkS+ CDS 262618 263595 . - 0 ID=cds-PMC19102.1;Parent=gene-CJ235_07490;Dbxref=NCBI_GP:PMC19102.1;Name=PMC19102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07490;product=hypothetical protein;protein_id=PMC19102.1;transl_table=11 PNGG01000003.1 Genbank gene 263830 264624 . - . ID=gene-CJ235_07495;Name=CJ235_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07495 PNGG01000003.1 GeneMarkS+ CDS 263830 264624 . - 0 ID=cds-PMC19103.1;Parent=gene-CJ235_07495;Dbxref=NCBI_GP:PMC19103.1;Name=PMC19103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07495;product=hypothetical protein;protein_id=PMC19103.1;transl_table=11 PNGG01000003.1 Genbank gene 264907 265629 . - . ID=gene-CJ235_07500;Name=CJ235_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07500 PNGG01000003.1 Protein Homology CDS 264907 265629 . - 0 ID=cds-PMC19104.1;Parent=gene-CJ235_07500;Dbxref=NCBI_GP:PMC19104.1;Name=PMC19104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498749.1;locus_tag=CJ235_07500;product=peptide ABC transporter permease;protein_id=PMC19104.1;transl_table=11 PNGG01000003.1 Genbank gene 265644 266279 . - . ID=gene-CJ235_07505;Name=CJ235_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07505 PNGG01000003.1 Protein Homology CDS 265644 266279 . - 0 ID=cds-PMC19105.1;Parent=gene-CJ235_07505;Dbxref=NCBI_GP:PMC19105.1;Name=PMC19105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501291.1;locus_tag=CJ235_07505;product=peptide ABC transporter ATP-binding protein;protein_id=PMC19105.1;transl_table=11 PNGG01000003.1 Genbank gene 266290 267057 . - . ID=gene-CJ235_07510;Name=CJ235_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07510 PNGG01000003.1 Protein Homology CDS 266290 267057 . - 0 ID=cds-PMC19106.1;Parent=gene-CJ235_07510;Dbxref=NCBI_GP:PMC19106.1;Name=PMC19106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486681.1;locus_tag=CJ235_07510;product=peptidase;protein_id=PMC19106.1;transl_table=11 PNGG01000003.1 Genbank gene 267038 268000 . - . ID=gene-CJ235_07515;Name=CJ235_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07515 PNGG01000003.1 Protein Homology CDS 267038 268000 . - 0 ID=cds-PMC19107.1;Parent=gene-CJ235_07515;Dbxref=NCBI_GP:PMC19107.1;Name=PMC19107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486685.1;locus_tag=CJ235_07515;product=YydG family peptide radical SAM peptide maturase;protein_id=PMC19107.1;transl_table=11 PNGG01000003.1 Genbank gene 268061 268222 . - . ID=gene-CJ235_07520;Name=CJ235_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07520 PNGG01000003.1 Protein Homology CDS 268061 268222 . - 0 ID=cds-PMC19108.1;Parent=gene-CJ235_07520;Dbxref=NCBI_GP:PMC19108.1;Name=PMC19108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511723.1;locus_tag=CJ235_07520;product=YydF family exported signaling peptide;protein_id=PMC19108.1;transl_table=11 PNGG01000003.1 Genbank gene 268404 269003 . - . ID=gene-CJ235_07525;Name=CJ235_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07525 PNGG01000003.1 GeneMarkS+ CDS 268404 269003 . - 0 ID=cds-PMC19109.1;Parent=gene-CJ235_07525;Dbxref=NCBI_GP:PMC19109.1;Name=PMC19109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07525;product=type I secretion system protein;protein_id=PMC19109.1;transl_table=11 PNGG01000003.1 Genbank gene 269234 269548 . + . ID=gene-CJ235_07530;Name=CJ235_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07530 PNGG01000003.1 Protein Homology CDS 269234 269548 . + 0 ID=cds-PMC19172.1;Parent=gene-CJ235_07530;Dbxref=NCBI_GP:PMC19172.1;Name=PMC19172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470916.1;locus_tag=CJ235_07530;product=hypothetical protein;protein_id=PMC19172.1;transl_table=11 PNGG01000003.1 Genbank gene 269876 271072 . + . ID=gene-CJ235_07535;Name=CJ235_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07535 PNGG01000003.1 Protein Homology CDS 269876 271072 . + 0 ID=cds-PMC19110.1;Parent=gene-CJ235_07535;Dbxref=NCBI_GP:PMC19110.1;Name=PMC19110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470904.1;locus_tag=CJ235_07535;product=GTP-binding protein;protein_id=PMC19110.1;transl_table=11 PNGG01000003.1 Genbank gene 271163 273472 . - . ID=gene-CJ235_07540;Name=CJ235_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07540 PNGG01000003.1 Protein Homology CDS 271163 273472 . - 0 ID=cds-PMC19111.1;Parent=gene-CJ235_07540;Dbxref=NCBI_GP:PMC19111.1;Name=PMC19111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470913.1;locus_tag=CJ235_07540;product=CDP-glycerol glycerophosphotransferase;protein_id=PMC19111.1;transl_table=11 PNGG01000003.1 Genbank gene 273486 276047 . - . ID=gene-CJ235_07545;Name=CJ235_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07545 PNGG01000003.1 Protein Homology CDS 273486 276047 . - 0 ID=cds-PMC19112.1;Parent=gene-CJ235_07545;Dbxref=NCBI_GP:PMC19112.1;Name=PMC19112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470905.1;locus_tag=CJ235_07545;product=CDP-glycerol glycerophosphotransferase;protein_id=PMC19112.1;transl_table=11 PNGG01000003.1 Genbank gene 276635 277861 . + . ID=gene-CJ235_07550;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=CJ235_07550 PNGG01000003.1 Protein Homology CDS 276635 277861 . + 0 ID=cds-PMC19173.1;Parent=gene-CJ235_07550;Dbxref=NCBI_GP:PMC19173.1;Name=PMC19173.1;gbkey=CDS;gene=pgaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014612785.1;locus_tag=CJ235_07550;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase;protein_id=PMC19173.1;transl_table=11 PNGG01000003.1 Genbank gene 277828 278136 . + . ID=gene-CJ235_07555;Name=icaD;gbkey=Gene;gene=icaD;gene_biotype=protein_coding;locus_tag=CJ235_07555 PNGG01000003.1 Protein Homology CDS 277828 278136 . + 0 ID=cds-PMC19113.1;Parent=gene-CJ235_07555;Dbxref=NCBI_GP:PMC19113.1;Name=PMC19113.1;gbkey=CDS;gene=icaD;inference=COORDINATES: protein motif:HMM:TIGR03932;locus_tag=CJ235_07555;product=intracellular adhesion protein D;protein_id=PMC19113.1;transl_table=11 PNGG01000003.1 Genbank gene 278202 278996 . + . ID=gene-CJ235_07560;Name=icaB;gbkey=Gene;gene=icaB;gene_biotype=protein_coding;locus_tag=CJ235_07560 PNGG01000003.1 Protein Homology CDS 278202 278996 . + 0 ID=cds-PMC19174.1;Parent=gene-CJ235_07560;Dbxref=NCBI_GP:PMC19174.1;Name=PMC19174.1;gbkey=CDS;gene=icaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470911.1;locus_tag=CJ235_07560;product=intercellular adhesin biosynthesis polysaccharide N-deacetylase;protein_id=PMC19174.1;transl_table=11 PNGG01000003.1 Genbank gene 278993 280045 . + . ID=gene-CJ235_07565;Name=CJ235_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07565 PNGG01000003.1 Protein Homology CDS 278993 280045 . + 0 ID=cds-PMC19114.1;Parent=gene-CJ235_07565;Dbxref=NCBI_GP:PMC19114.1;Name=PMC19114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470903.1;locus_tag=CJ235_07565;product=poly-beta-1%2C6-N-acetyl-D-glucosamine export protein;protein_id=PMC19114.1;transl_table=11 PNGG01000003.1 Genbank gene 280089 280787 . - . ID=gene-CJ235_07570;Name=CJ235_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07570 PNGG01000003.1 Protein Homology CDS 280089 280787 . - 0 ID=cds-PMC19115.1;Parent=gene-CJ235_07570;Dbxref=NCBI_GP:PMC19115.1;Name=PMC19115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01569.19;locus_tag=CJ235_07570;product=PAP2 family protein;protein_id=PMC19115.1;transl_table=11 PNGG01000003.1 Genbank gene 280968 281495 . + . ID=gene-CJ235_07575;Name=CJ235_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07575 PNGG01000003.1 Protein Homology CDS 280968 281495 . + 0 ID=cds-PMC19116.1;Parent=gene-CJ235_07575;Dbxref=NCBI_GP:PMC19116.1;Name=PMC19116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999748.1;locus_tag=CJ235_07575;product=cupin domain-containing protein;protein_id=PMC19116.1;transl_table=11 PNGG01000003.1 Genbank gene 281514 283562 . + . ID=gene-CJ235_07580;Name=CJ235_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07580 PNGG01000003.1 Protein Homology CDS 281514 283562 . + 0 ID=cds-PMC19117.1;Parent=gene-CJ235_07580;Dbxref=NCBI_GP:PMC19117.1;Name=PMC19117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999747.1;locus_tag=CJ235_07580;product=hydantoinase/oxoprolinase family protein;protein_id=PMC19117.1;transl_table=11 PNGG01000003.1 Genbank gene 283552 285228 . + . ID=gene-CJ235_07585;Name=CJ235_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07585 PNGG01000003.1 Protein Homology CDS 283552 285228 . + 0 ID=cds-PMC19118.1;Parent=gene-CJ235_07585;Dbxref=NCBI_GP:PMC19118.1;Name=PMC19118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017549821.1;locus_tag=CJ235_07585;product=5-oxoprolinase;protein_id=PMC19118.1;transl_table=11 PNGG01000003.1 Genbank gene 285428 286678 . + . ID=gene-CJ235_07590;Name=CJ235_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07590 PNGG01000003.1 Protein Homology CDS 285428 286678 . + 0 ID=cds-PMC19119.1;Parent=gene-CJ235_07590;Dbxref=NCBI_GP:PMC19119.1;Name=PMC19119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470907.1;locus_tag=CJ235_07590;product=gfo/Idh/MocA family oxidoreductase;protein_id=PMC19119.1;transl_table=11 PNGG01000003.1 Genbank gene 286789 288141 . - . ID=gene-CJ235_07595;Name=CJ235_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07595 PNGG01000003.1 Protein Homology CDS 286789 288141 . - 0 ID=cds-PMC19120.1;Parent=gene-CJ235_07595;Dbxref=NCBI_GP:PMC19120.1;Name=PMC19120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470906.1;locus_tag=CJ235_07595;product=sodium:alanine symporter family protein;protein_id=PMC19120.1;transl_table=11 PNGG01000003.1 Genbank gene 288406 297372 . - . ID=gene-CJ235_07600;Name=CJ235_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07600 PNGG01000003.1 Protein Homology CDS 288406 297372 . - 0 ID=cds-PMC19121.1;Parent=gene-CJ235_07600;Dbxref=NCBI_GP:PMC19121.1;Name=PMC19121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19%2CHMM:TIGR01168;locus_tag=CJ235_07600;product=hypothetical protein;protein_id=PMC19121.1;transl_table=11 PNGG01000003.1 Genbank gene 297734 298552 . + . ID=gene-CJ235_07605;Name=CJ235_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07605 PNGG01000003.1 Protein Homology CDS 297734 298552 . + 0 ID=cds-PMC19122.1;Parent=gene-CJ235_07605;Dbxref=NCBI_GP:PMC19122.1;Name=PMC19122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CJ235_07605;product=AraC family transcriptional regulator;protein_id=PMC19122.1;transl_table=11 PNGG01000003.1 Genbank gene 298563 298886 . - . ID=gene-CJ235_07610;Name=CJ235_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07610 PNGG01000003.1 Protein Homology CDS 298563 298886 . - 0 ID=cds-PMC19123.1;Parent=gene-CJ235_07610;Dbxref=NCBI_GP:PMC19123.1;Name=PMC19123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011100750.1;locus_tag=CJ235_07610;product=QacE family quaternary ammonium compound efflux SMR transporter;protein_id=PMC19123.1;transl_table=11 PNGG01000003.1 Genbank gene 299041 299712 . - . ID=gene-CJ235_07615;Name=CJ235_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07615 PNGG01000003.1 GeneMarkS+ CDS 299041 299712 . - 0 ID=cds-PMC19124.1;Parent=gene-CJ235_07615;Dbxref=NCBI_GP:PMC19124.1;Name=PMC19124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07615;product=hypothetical protein;protein_id=PMC19124.1;transl_table=11 PNGG01000003.1 Genbank gene 299714 300805 . - . ID=gene-CJ235_07620;Name=CJ235_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07620 PNGG01000003.1 Protein Homology CDS 299714 300805 . - 0 ID=cds-PMC19125.1;Parent=gene-CJ235_07620;Dbxref=NCBI_GP:PMC19125.1;Name=PMC19125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470917.1;locus_tag=CJ235_07620;product=sensor histidine kinase;protein_id=PMC19125.1;transl_table=11 PNGG01000003.1 Genbank gene 300793 301458 . - . ID=gene-CJ235_07625;Name=CJ235_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07625 PNGG01000003.1 Protein Homology CDS 300793 301458 . - 0 ID=cds-PMC19126.1;Parent=gene-CJ235_07625;Dbxref=NCBI_GP:PMC19126.1;Name=PMC19126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460964.1;locus_tag=CJ235_07625;product=DNA-binding response regulator;protein_id=PMC19126.1;transl_table=11 PNGG01000003.1 Genbank gene 301553 302161 . - . ID=gene-CJ235_07630;Name=CJ235_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07630 PNGG01000003.1 GeneMarkS+ CDS 301553 302161 . - 0 ID=cds-PMC19127.1;Parent=gene-CJ235_07630;Dbxref=NCBI_GP:PMC19127.1;Name=PMC19127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07630;product=hypothetical protein;protein_id=PMC19127.1;transl_table=11 PNGG01000003.1 Genbank gene 302127 303248 . - . ID=gene-CJ235_07635;Name=CJ235_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07635 PNGG01000003.1 Protein Homology CDS 302127 303248 . - 0 ID=cds-PMC19128.1;Parent=gene-CJ235_07635;Dbxref=NCBI_GP:PMC19128.1;Name=PMC19128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492023.1;locus_tag=CJ235_07635;product=hypothetical protein;protein_id=PMC19128.1;transl_table=11 PNGG01000003.1 Genbank gene 303262 304128 . - . ID=gene-CJ235_07640;Name=CJ235_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07640 PNGG01000003.1 Protein Homology CDS 303262 304128 . - 0 ID=cds-PMC19129.1;Parent=gene-CJ235_07640;Dbxref=NCBI_GP:PMC19129.1;Name=PMC19129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495170.1;locus_tag=CJ235_07640;product=ABC transporter ATP-binding protein;protein_id=PMC19129.1;transl_table=11 PNGG01000003.1 Genbank gene 304373 305443 . - . ID=gene-CJ235_07645;Name=CJ235_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07645 PNGG01000003.1 Protein Homology CDS 304373 305443 . - 0 ID=cds-PMC19130.1;Parent=gene-CJ235_07645;Dbxref=NCBI_GP:PMC19130.1;Name=PMC19130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482323.1;locus_tag=CJ235_07645;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=PMC19130.1;transl_table=11 PNGG01000003.1 Genbank gene 305715 307037 . - . ID=gene-CJ235_07650;Name=CJ235_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07650 PNGG01000003.1 Protein Homology CDS 305715 307037 . - 0 ID=cds-PMC19131.1;Parent=gene-CJ235_07650;Dbxref=NCBI_GP:PMC19131.1;Name=PMC19131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463814.1;locus_tag=CJ235_07650;product=amino acid permease;protein_id=PMC19131.1;transl_table=11 PNGG01000003.1 Genbank gene 307070 308110 . - . ID=gene-CJ235_07655;Name=CJ235_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07655 PNGG01000003.1 Protein Homology CDS 307070 308110 . - 0 ID=cds-PMC19132.1;Parent=gene-CJ235_07655;Dbxref=NCBI_GP:PMC19132.1;Name=PMC19132.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425924.1;locus_tag=CJ235_07655;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=PMC19132.1;transl_table=11 PNGG01000003.1 Genbank gene 308157 309275 . - . ID=gene-CJ235_07660;Name=CJ235_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07660 PNGG01000003.1 Protein Homology CDS 308157 309275 . - 0 ID=cds-PMC19133.1;Parent=gene-CJ235_07660;Dbxref=NCBI_GP:PMC19133.1;Name=PMC19133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471676.1;locus_tag=CJ235_07660;product=alanine dehydrogenase;protein_id=PMC19133.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 309826 310248 . + . ID=gene-CJ235_07665;Name=CJ235_07665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_07665;pseudo=true PNGG01000003.1 Protein Homology CDS 309826 310248 . + 0 ID=cds-CJ235_07665;Parent=gene-CJ235_07665;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471686.1;locus_tag=CJ235_07665;product=6-pyruvoyl tetrahydropterin synthase;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 310335 310892 . - . ID=gene-CJ235_07670;Name=CJ235_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07670 PNGG01000003.1 Protein Homology CDS 310335 310892 . - 0 ID=cds-PMC19134.1;Parent=gene-CJ235_07670;Dbxref=NCBI_GP:PMC19134.1;Name=PMC19134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471681.1;locus_tag=CJ235_07670;product=DUF488 domain-containing protein;protein_id=PMC19134.1;transl_table=11 PNGG01000003.1 Genbank gene 310967 311593 . - . ID=gene-CJ235_07675;Name=CJ235_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07675 PNGG01000003.1 Protein Homology CDS 310967 311593 . - 0 ID=cds-PMC19135.1;Parent=gene-CJ235_07675;Dbxref=NCBI_GP:PMC19135.1;Name=PMC19135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471678.1;locus_tag=CJ235_07675;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=PMC19135.1;transl_table=11 PNGG01000003.1 Genbank gene 311678 312880 . - . ID=gene-CJ235_07680;Name=CJ235_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07680 PNGG01000003.1 Protein Homology CDS 311678 312880 . - 0 ID=cds-PMC19136.1;Parent=gene-CJ235_07680;Dbxref=NCBI_GP:PMC19136.1;Name=PMC19136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471680.1;locus_tag=CJ235_07680;product=MFS transporter;protein_id=PMC19136.1;transl_table=11 PNGG01000003.1 Genbank gene 312940 313164 . - . ID=gene-CJ235_07685;Name=CJ235_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07685 PNGG01000003.1 Protein Homology CDS 312940 313164 . - 0 ID=cds-PMC19137.1;Parent=gene-CJ235_07685;Dbxref=NCBI_GP:PMC19137.1;Name=PMC19137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274482.1;locus_tag=CJ235_07685;product=hypothetical protein;protein_id=PMC19137.1;transl_table=11 PNGG01000003.1 Genbank gene 313348 314706 . - . ID=gene-CJ235_07690;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CJ235_07690 PNGG01000003.1 Protein Homology CDS 313348 314706 . - 0 ID=cds-PMC19138.1;Parent=gene-CJ235_07690;Dbxref=NCBI_GP:PMC19138.1;Name=PMC19138.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454283.1;locus_tag=CJ235_07690;product=branched-chain amino acid transport system II carrier protein;protein_id=PMC19138.1;transl_table=11 PNGG01000003.1 Genbank gene 314993 315358 . - . ID=gene-CJ235_07695;Name=CJ235_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07695 PNGG01000003.1 Protein Homology CDS 314993 315358 . - 0 ID=cds-PMC19139.1;Parent=gene-CJ235_07695;Dbxref=NCBI_GP:PMC19139.1;Name=PMC19139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501806.1;locus_tag=CJ235_07695;product=DUF3139 domain-containing protein;protein_id=PMC19139.1;transl_table=11 PNGG01000003.1 Genbank gene 315547 315933 . + . ID=gene-CJ235_07700;Name=CJ235_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07700 PNGG01000003.1 Protein Homology CDS 315547 315933 . + 0 ID=cds-PMC19140.1;Parent=gene-CJ235_07700;Dbxref=NCBI_GP:PMC19140.1;Name=PMC19140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445097.1;locus_tag=CJ235_07700;product=DUF1093 domain-containing protein;protein_id=PMC19140.1;transl_table=11 PNGG01000003.1 Genbank gene 316098 316856 . + . ID=gene-CJ235_07705;Name=CJ235_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07705 PNGG01000003.1 Protein Homology CDS 316098 316856 . + 0 ID=cds-PMC19141.1;Parent=gene-CJ235_07705;Dbxref=NCBI_GP:PMC19141.1;Name=PMC19141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765955.1;locus_tag=CJ235_07705;product=ABC transporter ATP-binding protein;protein_id=PMC19141.1;transl_table=11 PNGG01000003.1 Genbank gene 316846 318723 . + . ID=gene-CJ235_07710;Name=CJ235_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07710 PNGG01000003.1 Protein Homology CDS 316846 318723 . + 0 ID=cds-PMC19142.1;Parent=gene-CJ235_07710;Dbxref=NCBI_GP:PMC19142.1;Name=PMC19142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471685.1;locus_tag=CJ235_07710;product=bacitracin ABC transporter permease;protein_id=PMC19142.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 318844 319387 . - . ID=gene-CJ235_07715;Name=CJ235_07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_07715;pseudo=true PNGG01000003.1 Protein Homology CDS 318844 319387 . - 0 ID=cds-CJ235_07715;Parent=gene-CJ235_07715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274579.1;locus_tag=CJ235_07715;product=flavodoxin;pseudo=true;transl_table=11 PNGG01000003.1 Genbank pseudogene 319389 319793 . - . ID=gene-CJ235_07720;Name=CJ235_07720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_07720;pseudo=true PNGG01000003.1 Protein Homology CDS 319389 319793 . - 0 ID=cds-CJ235_07720;Parent=gene-CJ235_07720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449493.1;locus_tag=CJ235_07720;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 320011 320982 . + . ID=gene-CJ235_07725;Name=CJ235_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07725 PNGG01000003.1 Protein Homology CDS 320011 320982 . + 0 ID=cds-PMC19143.1;Parent=gene-CJ235_07725;Dbxref=NCBI_GP:PMC19143.1;Name=PMC19143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662033.1;locus_tag=CJ235_07725;product=tRNA-dihydrouridine synthase;protein_id=PMC19143.1;transl_table=11 PNGG01000003.1 Genbank gene 321096 321680 . - . ID=gene-CJ235_07730;Name=CJ235_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07730 PNGG01000003.1 Protein Homology CDS 321096 321680 . - 0 ID=cds-PMC19144.1;Parent=gene-CJ235_07730;Dbxref=NCBI_GP:PMC19144.1;Name=PMC19144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435025.1;locus_tag=CJ235_07730;product=glutamine amidotransferase;protein_id=PMC19144.1;transl_table=11 PNGG01000003.1 Genbank gene 321943 322563 . - . ID=gene-CJ235_07735;Name=CJ235_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07735 PNGG01000003.1 Protein Homology CDS 321943 322563 . - 0 ID=cds-PMC19145.1;Parent=gene-CJ235_07735;Dbxref=NCBI_GP:PMC19145.1;Name=PMC19145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447607.1;locus_tag=CJ235_07735;product=hypothetical protein;protein_id=PMC19145.1;transl_table=11 PNGG01000003.1 Genbank gene 322737 324620 . - . ID=gene-CJ235_07740;Name=CJ235_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07740 PNGG01000003.1 Protein Homology CDS 322737 324620 . - 0 ID=cds-PMC19146.1;Parent=gene-CJ235_07740;Dbxref=NCBI_GP:PMC19146.1;Name=PMC19146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471675.1;locus_tag=CJ235_07740;product=glycosyltransferase family 2 protein;protein_id=PMC19146.1;transl_table=11 PNGG01000003.1 Genbank gene 324640 325707 . - . ID=gene-CJ235_07745;Name=CJ235_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07745 PNGG01000003.1 Protein Homology CDS 324640 325707 . - 0 ID=cds-PMC19147.1;Parent=gene-CJ235_07745;Dbxref=NCBI_GP:PMC19147.1;Name=PMC19147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930495.1;locus_tag=CJ235_07745;product=adhesion protein;protein_id=PMC19147.1;transl_table=11 PNGG01000003.1 Genbank gene 326117 327103 . - . ID=gene-CJ235_07750;Name=CJ235_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07750 PNGG01000003.1 Protein Homology CDS 326117 327103 . - 0 ID=cds-PMC19148.1;Parent=gene-CJ235_07750;Dbxref=NCBI_GP:PMC19148.1;Name=PMC19148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03558;locus_tag=CJ235_07750;product=MsnO8 family LLM class oxidoreductase;protein_id=PMC19148.1;transl_table=11 PNGG01000003.1 Genbank gene 327134 327799 . - . ID=gene-CJ235_07755;Name=CJ235_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07755 PNGG01000003.1 Protein Homology CDS 327134 327799 . - 0 ID=cds-PMC19149.1;Parent=gene-CJ235_07755;Dbxref=NCBI_GP:PMC19149.1;Name=PMC19149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02525.15;locus_tag=CJ235_07755;product=flavodoxin family protein;protein_id=PMC19149.1;transl_table=11 PNGG01000003.1 Genbank gene 327936 328250 . - . ID=gene-CJ235_07760;Name=CJ235_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07760 PNGG01000003.1 Protein Homology CDS 327936 328250 . - 0 ID=cds-PMC19175.1;Parent=gene-CJ235_07760;Dbxref=NCBI_GP:PMC19175.1;Name=PMC19175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007061545.1;locus_tag=CJ235_07760;product=HxlR family transcriptional regulator;protein_id=PMC19175.1;transl_table=11 PNGG01000003.1 Genbank gene 328413 329732 . + . ID=gene-CJ235_07765;Name=CJ235_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07765 PNGG01000003.1 Protein Homology CDS 328413 329732 . + 0 ID=cds-PMC19150.1;Parent=gene-CJ235_07765;Dbxref=NCBI_GP:PMC19150.1;Name=PMC19150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03860;locus_tag=CJ235_07765;product=nitrilotriacetate monooxygenase;protein_id=PMC19150.1;transl_table=11 PNGG01000003.1 Genbank gene 330052 330354 . + . ID=gene-CJ235_07770;Name=CJ235_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07770 PNGG01000003.1 Protein Homology CDS 330052 330354 . + 0 ID=cds-PMC19151.1;Parent=gene-CJ235_07770;Dbxref=NCBI_GP:PMC19151.1;Name=PMC19151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487367.1;locus_tag=CJ235_07770;product=transcriptional regulator;protein_id=PMC19151.1;transl_table=11 PNGG01000003.1 Genbank gene 330455 331468 . + . ID=gene-CJ235_07775;Name=CJ235_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07775 PNGG01000003.1 Protein Homology CDS 330455 331468 . + 0 ID=cds-PMC19152.1;Parent=gene-CJ235_07775;Dbxref=NCBI_GP:PMC19152.1;Name=PMC19152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483618.1;locus_tag=CJ235_07775;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=PMC19152.1;transl_table=11 PNGG01000003.1 Genbank gene 332174 332611 . + . ID=gene-CJ235_07780;Name=CJ235_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07780 PNGG01000003.1 Protein Homology CDS 332174 332611 . + 0 ID=cds-PMC19153.1;Parent=gene-CJ235_07780;Dbxref=NCBI_GP:PMC19153.1;Name=PMC19153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02386.14;locus_tag=CJ235_07780;product=TrkH family potassium uptake protein;protein_id=PMC19153.1;transl_table=11 PNGG01000003.1 Genbank pseudogene 332665 333162 . - . ID=gene-CJ235_07785;Name=CJ235_07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_07785;pseudo=true PNGG01000003.1 Protein Homology CDS 332665 333162 . - 0 ID=cds-CJ235_07785;Parent=gene-CJ235_07785;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638005.1;locus_tag=CJ235_07785;product=polyketide cyclase;pseudo=true;transl_table=11 PNGG01000003.1 Genbank gene 333270 333608 . - . ID=gene-CJ235_07790;Name=CJ235_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07790 PNGG01000003.1 Protein Homology CDS 333270 333608 . - 0 ID=cds-PMC19154.1;Parent=gene-CJ235_07790;Dbxref=NCBI_GP:PMC19154.1;Name=PMC19154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638006.1;locus_tag=CJ235_07790;product=transcriptional regulator;protein_id=PMC19154.1;transl_table=11 PNGG01000003.1 Genbank gene 333632 334111 . - . ID=gene-CJ235_07795;Name=CJ235_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07795 PNGG01000003.1 Protein Homology CDS 333632 334111 . - 0 ID=cds-PMC19155.1;Parent=gene-CJ235_07795;Dbxref=NCBI_GP:PMC19155.1;Name=PMC19155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CJ235_07795;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=PMC19155.1;transl_table=11 PNGG01000003.1 Genbank gene 334619 335419 . - . ID=gene-CJ235_07800;Name=CJ235_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07800 PNGG01000003.1 Protein Homology CDS 334619 335419 . - 0 ID=cds-PMC19156.1;Parent=gene-CJ235_07800;Dbxref=NCBI_GP:PMC19156.1;Name=PMC19156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763577.1;locus_tag=CJ235_07800;product=MBL fold metallo-hydrolase;protein_id=PMC19156.1;transl_table=11 PNGG01000003.1 Genbank gene 336002 336826 . + . ID=gene-CJ235_07805;Name=CJ235_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07805 PNGG01000003.1 Protein Homology CDS 336002 336826 . + 0 ID=cds-PMC19157.1;Parent=gene-CJ235_07805;Dbxref=NCBI_GP:PMC19157.1;Name=PMC19157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472746.1;locus_tag=CJ235_07805;product=DUF3100 domain-containing protein;protein_id=PMC19157.1;transl_table=11 PNGG01000003.1 Genbank gene 336810 337262 . + . ID=gene-CJ235_07810;Name=CJ235_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07810 PNGG01000003.1 Protein Homology CDS 336810 337262 . + 0 ID=cds-PMC19158.1;Parent=gene-CJ235_07810;Dbxref=NCBI_GP:PMC19158.1;Name=PMC19158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302160.1;locus_tag=CJ235_07810;product=hypothetical protein;protein_id=PMC19158.1;transl_table=11 PNGG01000003.1 Genbank gene 337575 338354 . - . ID=gene-CJ235_07815;Name=CJ235_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07815 PNGG01000003.1 Protein Homology CDS 337575 338354 . - 0 ID=cds-PMC19159.1;Parent=gene-CJ235_07815;Dbxref=NCBI_GP:PMC19159.1;Name=PMC19159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506239.1;locus_tag=CJ235_07815;product=hypothetical protein;protein_id=PMC19159.1;transl_table=11 PNGG01000003.1 Genbank gene 338355 339692 . - . ID=gene-CJ235_07820;Name=CJ235_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07820 PNGG01000003.1 Protein Homology CDS 338355 339692 . - 0 ID=cds-PMC19160.1;Parent=gene-CJ235_07820;Dbxref=NCBI_GP:PMC19160.1;Name=PMC19160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454352.1;locus_tag=CJ235_07820;product=hypothetical protein;protein_id=PMC19160.1;transl_table=11 PNGG01000003.1 Genbank gene 339682 341511 . - . ID=gene-CJ235_07825;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;locus_tag=CJ235_07825 PNGG01000003.1 Protein Homology CDS 339682 341511 . - 0 ID=cds-PMC19161.1;Parent=gene-CJ235_07825;Dbxref=NCBI_GP:PMC19161.1;Name=PMC19161.1;gbkey=CDS;gene=walK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510631.1;locus_tag=CJ235_07825;product=cell wall metabolism sensor histidine kinase WalK;protein_id=PMC19161.1;transl_table=11 PNGG01000003.1 Genbank gene 341524 342228 . - . ID=gene-CJ235_07830;Name=CJ235_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07830 PNGG01000003.1 Protein Homology CDS 341524 342228 . - 0 ID=cds-PMC19162.1;Parent=gene-CJ235_07830;Dbxref=NCBI_GP:PMC19162.1;Name=PMC19162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368220.1;locus_tag=CJ235_07830;product=DNA-binding response regulator;protein_id=PMC19162.1;transl_table=11 ##sequence-region PNGG01000004.1 1 262469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000004.1 Genbank region 1 262469 . + . ID=PNGG01000004.1:1..262469;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000004.1 Genbank gene 278 1957 . + . ID=gene-CJ235_07835;Name=CJ235_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07835 PNGG01000004.1 Protein Homology CDS 278 1957 . + 0 ID=cds-PMC18333.1;Parent=gene-CJ235_07835;Dbxref=NCBI_GP:PMC18333.1;Name=PMC18333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472632.1;locus_tag=CJ235_07835;product=teichoic acid biosynthesis protein F;protein_id=PMC18333.1;transl_table=11 PNGG01000004.1 Genbank gene 2035 2556 . - . ID=gene-CJ235_07840;Name=CJ235_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07840 PNGG01000004.1 Protein Homology CDS 2035 2556 . - 0 ID=cds-PMC18334.1;Parent=gene-CJ235_07840;Dbxref=NCBI_GP:PMC18334.1;Name=PMC18334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472622.1;locus_tag=CJ235_07840;product=N-acetyltransferase;protein_id=PMC18334.1;transl_table=11 PNGG01000004.1 Genbank gene 2743 2973 . + . ID=gene-CJ235_07845;Name=CJ235_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07845 PNGG01000004.1 Protein Homology CDS 2743 2973 . + 0 ID=cds-PMC18335.1;Parent=gene-CJ235_07845;Dbxref=NCBI_GP:PMC18335.1;Name=PMC18335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636815.1;locus_tag=CJ235_07845;product=twin-arginine translocase TatA/TatE family subunit;protein_id=PMC18335.1;transl_table=11 PNGG01000004.1 Genbank gene 3002 3685 . + . ID=gene-CJ235_07850;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CJ235_07850 PNGG01000004.1 Protein Homology CDS 3002 3685 . + 0 ID=cds-PMC18336.1;Parent=gene-CJ235_07850;Dbxref=NCBI_GP:PMC18336.1;Name=PMC18336.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006191819.1;locus_tag=CJ235_07850;product=twin-arginine translocase subunit TatC;protein_id=PMC18336.1;transl_table=11 PNGG01000004.1 Genbank gene 3733 5448 . - . ID=gene-CJ235_07855;Name=CJ235_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07855 PNGG01000004.1 Protein Homology CDS 3733 5448 . - 0 ID=cds-PMC18337.1;Parent=gene-CJ235_07855;Dbxref=NCBI_GP:PMC18337.1;Name=PMC18337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901452.1;locus_tag=CJ235_07855;product=hypothetical protein;protein_id=PMC18337.1;transl_table=11 PNGG01000004.1 Genbank gene 5429 6652 . - . ID=gene-CJ235_07860;Name=CJ235_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07860 PNGG01000004.1 Protein Homology CDS 5429 6652 . - 0 ID=cds-PMC18338.1;Parent=gene-CJ235_07860;Dbxref=NCBI_GP:PMC18338.1;Name=PMC18338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472628.1;locus_tag=CJ235_07860;product=deferrochelatase/peroxidase EfeB;protein_id=PMC18338.1;transl_table=11 PNGG01000004.1 Genbank gene 6652 7500 . - . ID=gene-CJ235_07865;Name=CJ235_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07865 PNGG01000004.1 Protein Homology CDS 6652 7500 . - 0 ID=cds-PMC18339.1;Parent=gene-CJ235_07865;Dbxref=NCBI_GP:PMC18339.1;Name=PMC18339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467382.1;locus_tag=CJ235_07865;product=hypothetical protein;protein_id=PMC18339.1;transl_table=11 PNGG01000004.1 Genbank gene 7752 8741 . + . ID=gene-CJ235_07870;Name=CJ235_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07870 PNGG01000004.1 Protein Homology CDS 7752 8741 . + 0 ID=cds-PMC18340.1;Parent=gene-CJ235_07870;Dbxref=NCBI_GP:PMC18340.1;Name=PMC18340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723235.1;locus_tag=CJ235_07870;product=oxidoreductase;protein_id=PMC18340.1;transl_table=11 PNGG01000004.1 Genbank gene 9184 10548 . + . ID=gene-CJ235_07875;Name=CJ235_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07875 PNGG01000004.1 Protein Homology CDS 9184 10548 . + 0 ID=cds-PMC18341.1;Parent=gene-CJ235_07875;Dbxref=NCBI_GP:PMC18341.1;Name=PMC18341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723236.1;locus_tag=CJ235_07875;product=sugar porter family MFS transporter;protein_id=PMC18341.1;transl_table=11 PNGG01000004.1 Genbank gene 10905 11306 . - . ID=gene-CJ235_07880;Name=CJ235_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07880 PNGG01000004.1 Protein Homology CDS 10905 11306 . - 0 ID=cds-PMC18342.1;Parent=gene-CJ235_07880;Dbxref=NCBI_GP:PMC18342.1;Name=PMC18342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460201.1;locus_tag=CJ235_07880;product=N-acetyltransferase;protein_id=PMC18342.1;transl_table=11 PNGG01000004.1 Genbank gene 11334 12365 . - . ID=gene-CJ235_07885;Name=CJ235_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07885 PNGG01000004.1 Protein Homology CDS 11334 12365 . - 0 ID=cds-PMC18343.1;Parent=gene-CJ235_07885;Dbxref=NCBI_GP:PMC18343.1;Name=PMC18343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482481.1;locus_tag=CJ235_07885;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=PMC18343.1;transl_table=11 PNGG01000004.1 Genbank gene 12711 12992 . - . ID=gene-CJ235_07890;Name=CJ235_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07890 PNGG01000004.1 GeneMarkS+ CDS 12711 12992 . - 0 ID=cds-PMC18344.1;Parent=gene-CJ235_07890;Dbxref=NCBI_GP:PMC18344.1;Name=PMC18344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07890;product=hypothetical protein;protein_id=PMC18344.1;transl_table=11 PNGG01000004.1 Genbank gene 13120 13743 . - . ID=gene-CJ235_07895;Name=CJ235_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07895 PNGG01000004.1 Protein Homology CDS 13120 13743 . - 0 ID=cds-PMC18345.1;Parent=gene-CJ235_07895;Dbxref=NCBI_GP:PMC18345.1;Name=PMC18345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07895;product=Csa1 family protein;protein_id=PMC18345.1;transl_table=11 PNGG01000004.1 Genbank gene 13817 14197 . - . ID=gene-CJ235_07900;Name=CJ235_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07900 PNGG01000004.1 Protein Homology CDS 13817 14197 . - 0 ID=cds-PMC18346.1;Parent=gene-CJ235_07900;Dbxref=NCBI_GP:PMC18346.1;Name=PMC18346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07900;product=hypothetical protein;protein_id=PMC18346.1;transl_table=11 PNGG01000004.1 Genbank gene 14179 14595 . - . ID=gene-CJ235_07905;Name=CJ235_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07905 PNGG01000004.1 Protein Homology CDS 14179 14595 . - 0 ID=cds-PMC18347.1;Parent=gene-CJ235_07905;Dbxref=NCBI_GP:PMC18347.1;Name=PMC18347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07905;product=hypothetical protein;protein_id=PMC18347.1;transl_table=11 PNGG01000004.1 Genbank gene 14899 15522 . - . ID=gene-CJ235_07910;Name=CJ235_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07910 PNGG01000004.1 Protein Homology CDS 14899 15522 . - 0 ID=cds-PMC18348.1;Parent=gene-CJ235_07910;Dbxref=NCBI_GP:PMC18348.1;Name=PMC18348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07910;product=tandem-type lipoprotein;protein_id=PMC18348.1;transl_table=11 PNGG01000004.1 Genbank gene 15586 16428 . - . ID=gene-CJ235_07915;Name=CJ235_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07915 PNGG01000004.1 Protein Homology CDS 15586 16428 . - 0 ID=cds-PMC18349.1;Parent=gene-CJ235_07915;Dbxref=NCBI_GP:PMC18349.1;Name=PMC18349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07915;product=tandem-type lipoprotein;protein_id=PMC18349.1;transl_table=11 PNGG01000004.1 Genbank gene 16593 17348 . - . ID=gene-CJ235_07920;Name=CJ235_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07920 PNGG01000004.1 Protein Homology CDS 16593 17348 . - 0 ID=cds-PMC18350.1;Parent=gene-CJ235_07920;Dbxref=NCBI_GP:PMC18350.1;Name=PMC18350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07920;product=Csa1 family protein;protein_id=PMC18350.1;transl_table=11 PNGG01000004.1 Genbank gene 17428 17718 . - . ID=gene-CJ235_07925;Name=CJ235_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07925 PNGG01000004.1 GeneMarkS+ CDS 17428 17718 . - 0 ID=cds-PMC18351.1;Parent=gene-CJ235_07925;Dbxref=NCBI_GP:PMC18351.1;Name=PMC18351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07925;product=hypothetical protein;protein_id=PMC18351.1;transl_table=11 PNGG01000004.1 Genbank gene 17709 17981 . - . ID=gene-CJ235_07930;Name=CJ235_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07930 PNGG01000004.1 Protein Homology CDS 17709 17981 . - 0 ID=cds-PMC18352.1;Parent=gene-CJ235_07930;Dbxref=NCBI_GP:PMC18352.1;Name=PMC18352.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07930;product=Csa1 family protein;protein_id=PMC18352.1;transl_table=11 PNGG01000004.1 Genbank gene 18124 18906 . - . ID=gene-CJ235_07935;Name=CJ235_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07935 PNGG01000004.1 Protein Homology CDS 18124 18906 . - 0 ID=cds-PMC18353.1;Parent=gene-CJ235_07935;Dbxref=NCBI_GP:PMC18353.1;Name=PMC18353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04507.10;locus_tag=CJ235_07935;product=tandem-type lipoprotein;protein_id=PMC18353.1;transl_table=11 PNGG01000004.1 Genbank gene 18975 19577 . - . ID=gene-CJ235_07940;Name=CJ235_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07940 PNGG01000004.1 Protein Homology CDS 18975 19577 . - 0 ID=cds-PMC18354.1;Parent=gene-CJ235_07940;Dbxref=NCBI_GP:PMC18354.1;Name=PMC18354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16883.3;locus_tag=CJ235_07940;product=DUF5080 domain-containing protein;protein_id=PMC18354.1;transl_table=11 PNGG01000004.1 Genbank gene 19584 20036 . - . ID=gene-CJ235_07945;Name=CJ235_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07945 PNGG01000004.1 Protein Homology CDS 19584 20036 . - 0 ID=cds-PMC18355.1;Parent=gene-CJ235_07945;Dbxref=NCBI_GP:PMC18355.1;Name=PMC18355.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16895.3;locus_tag=CJ235_07945;product=DUF5085 domain-containing protein;protein_id=PMC18355.1;transl_table=11 PNGG01000004.1 Genbank gene 20036 20482 . - . ID=gene-CJ235_07950;Name=CJ235_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07950 PNGG01000004.1 Protein Homology CDS 20036 20482 . - 0 ID=cds-PMC18356.1;Parent=gene-CJ235_07950;Dbxref=NCBI_GP:PMC18356.1;Name=PMC18356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475708.1;locus_tag=CJ235_07950;product=DUF5085 domain-containing protein;protein_id=PMC18356.1;transl_table=11 PNGG01000004.1 Genbank gene 20517 21167 . - . ID=gene-CJ235_07955;Name=CJ235_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07955 PNGG01000004.1 Protein Homology CDS 20517 21167 . - 0 ID=cds-PMC18357.1;Parent=gene-CJ235_07955;Dbxref=NCBI_GP:PMC18357.1;Name=PMC18357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16882.3;locus_tag=CJ235_07955;product=DUF5079 domain-containing protein;protein_id=PMC18357.1;transl_table=11 PNGG01000004.1 Genbank gene 21306 21893 . - . ID=gene-CJ235_07960;Name=CJ235_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07960 PNGG01000004.1 Protein Homology CDS 21306 21893 . - 0 ID=cds-PMC18358.1;Parent=gene-CJ235_07960;Dbxref=NCBI_GP:PMC18358.1;Name=PMC18358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16882.3;locus_tag=CJ235_07960;product=DUF5079 domain-containing protein;protein_id=PMC18358.1;transl_table=11 PNGG01000004.1 Genbank gene 21930 22355 . - . ID=gene-CJ235_07965;Name=CJ235_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07965 PNGG01000004.1 GeneMarkS+ CDS 21930 22355 . - 0 ID=cds-PMC18359.1;Parent=gene-CJ235_07965;Dbxref=NCBI_GP:PMC18359.1;Name=PMC18359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_07965;product=hypothetical protein;protein_id=PMC18359.1;transl_table=11 PNGG01000004.1 Genbank gene 22797 23141 . + . ID=gene-CJ235_07970;Name=CJ235_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07970 PNGG01000004.1 Protein Homology CDS 22797 23141 . + 0 ID=cds-PMC18360.1;Parent=gene-CJ235_07970;Dbxref=NCBI_GP:PMC18360.1;Name=PMC18360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07901.9;locus_tag=CJ235_07970;product=DUF1672 domain-containing protein;protein_id=PMC18360.1;transl_table=11 PNGG01000004.1 Genbank gene 23099 23749 . + . ID=gene-CJ235_07975;Name=CJ235_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07975 PNGG01000004.1 Protein Homology CDS 23099 23749 . + 0 ID=cds-PMC18361.1;Parent=gene-CJ235_07975;Dbxref=NCBI_GP:PMC18361.1;Name=PMC18361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07901.9;locus_tag=CJ235_07975;product=DUF1672 domain-containing protein;protein_id=PMC18361.1;transl_table=11 PNGG01000004.1 Genbank gene 24022 24441 . - . ID=gene-CJ235_07980;Name=CJ235_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07980 PNGG01000004.1 Protein Homology CDS 24022 24441 . - 0 ID=cds-PMC18362.1;Parent=gene-CJ235_07980;Dbxref=NCBI_GP:PMC18362.1;Name=PMC18362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174944.1;locus_tag=CJ235_07980;product=ribosomal-processing cysteine protease Prp;protein_id=PMC18362.1;transl_table=11 PNGG01000004.1 Genbank gene 24609 25199 . - . ID=gene-CJ235_07985;Name=CJ235_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07985 PNGG01000004.1 Protein Homology CDS 24609 25199 . - 0 ID=cds-PMC18363.1;Parent=gene-CJ235_07985;Dbxref=NCBI_GP:PMC18363.1;Name=PMC18363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472711.1;locus_tag=CJ235_07985;product=DUF1775 domain-containing protein;protein_id=PMC18363.1;transl_table=11 PNGG01000004.1 Genbank gene 25212 26465 . - . ID=gene-CJ235_07990;Name=CJ235_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07990 PNGG01000004.1 Protein Homology CDS 25212 26465 . - 0 ID=cds-PMC18364.1;Parent=gene-CJ235_07990;Dbxref=NCBI_GP:PMC18364.1;Name=PMC18364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472712.1;locus_tag=CJ235_07990;product=copper resistance protein CopC;protein_id=PMC18364.1;transl_table=11 PNGG01000004.1 Genbank gene 26885 28174 . - . ID=gene-CJ235_07995;Name=CJ235_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_07995 PNGG01000004.1 Protein Homology CDS 26885 28174 . - 0 ID=cds-PMC18365.1;Parent=gene-CJ235_07995;Dbxref=NCBI_GP:PMC18365.1;Name=PMC18365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472717.1;locus_tag=CJ235_07995;product=phage infection protein;protein_id=PMC18365.1;transl_table=11 PNGG01000004.1 Genbank gene 28345 28950 . + . ID=gene-CJ235_08000;Name=CJ235_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08000 PNGG01000004.1 Protein Homology CDS 28345 28950 . + 0 ID=cds-PMC18366.1;Parent=gene-CJ235_08000;Dbxref=NCBI_GP:PMC18366.1;Name=PMC18366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472715.1;locus_tag=CJ235_08000;product=TetR family transcriptional regulator;protein_id=PMC18366.1;transl_table=11 PNGG01000004.1 Genbank gene 29019 29960 . + . ID=gene-CJ235_08005;Name=CJ235_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08005 PNGG01000004.1 Protein Homology CDS 29019 29960 . + 0 ID=cds-PMC18367.1;Parent=gene-CJ235_08005;Dbxref=NCBI_GP:PMC18367.1;Name=PMC18367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472718.1;locus_tag=CJ235_08005;product=magnesium transporter CorA family protein;protein_id=PMC18367.1;transl_table=11 PNGG01000004.1 Genbank gene 30093 31532 . - . ID=gene-CJ235_08010;Name=CJ235_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08010 PNGG01000004.1 Protein Homology CDS 30093 31532 . - 0 ID=cds-PMC18368.1;Parent=gene-CJ235_08010;Dbxref=NCBI_GP:PMC18368.1;Name=PMC18368.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506818.1;locus_tag=CJ235_08010;product=PTS maltose transporter subunit IIBC;protein_id=PMC18368.1;transl_table=11 PNGG01000004.1 Genbank gene 31824 33026 . + . ID=gene-CJ235_08015;Name=CJ235_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08015 PNGG01000004.1 Protein Homology CDS 31824 33026 . + 0 ID=cds-PMC18369.1;Parent=gene-CJ235_08015;Dbxref=NCBI_GP:PMC18369.1;Name=PMC18369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CJ235_08015;product=hypothetical protein;protein_id=PMC18369.1;transl_table=11 PNGG01000004.1 Genbank gene 33095 33994 . + . ID=gene-CJ235_08020;Name=CJ235_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08020 PNGG01000004.1 GeneMarkS+ CDS 33095 33994 . + 0 ID=cds-PMC18370.1;Parent=gene-CJ235_08020;Dbxref=NCBI_GP:PMC18370.1;Name=PMC18370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08020;product=hypothetical protein;protein_id=PMC18370.1;transl_table=11 PNGG01000004.1 Genbank gene 34289 34591 . + . ID=gene-CJ235_08025;Name=CJ235_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08025 PNGG01000004.1 Protein Homology CDS 34289 34591 . + 0 ID=cds-PMC18563.1;Parent=gene-CJ235_08025;Dbxref=NCBI_GP:PMC18563.1;Name=PMC18563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274992.1;locus_tag=CJ235_08025;product=DUF4889 domain-containing protein;protein_id=PMC18563.1;transl_table=11 PNGG01000004.1 Genbank gene 34965 36245 . - . ID=gene-CJ235_08030;Name=CJ235_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08030 PNGG01000004.1 Protein Homology CDS 34965 36245 . - 0 ID=cds-PMC18371.1;Parent=gene-CJ235_08030;Dbxref=NCBI_GP:PMC18371.1;Name=PMC18371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470976.1;locus_tag=CJ235_08030;product=glutamate/aspartate:proton symporter GltP;protein_id=PMC18371.1;transl_table=11 PNGG01000004.1 Genbank gene 36526 37422 . - . ID=gene-CJ235_08035;Name=CJ235_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08035 PNGG01000004.1 Protein Homology CDS 36526 37422 . - 0 ID=cds-PMC18372.1;Parent=gene-CJ235_08035;Dbxref=NCBI_GP:PMC18372.1;Name=PMC18372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470974.1;locus_tag=CJ235_08035;product=EamA family transporter;protein_id=PMC18372.1;transl_table=11 PNGG01000004.1 Genbank gene 37717 38067 . - . ID=gene-CJ235_08040;Name=CJ235_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08040 PNGG01000004.1 Protein Homology CDS 37717 38067 . - 0 ID=cds-PMC18373.1;Parent=gene-CJ235_08040;Dbxref=NCBI_GP:PMC18373.1;Name=PMC18373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468835.1;locus_tag=CJ235_08040;product=DUF3139 domain-containing protein;protein_id=PMC18373.1;transl_table=11 PNGG01000004.1 Genbank gene 38221 38850 . - . ID=gene-CJ235_08045;Name=CJ235_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08045 PNGG01000004.1 Protein Homology CDS 38221 38850 . - 0 ID=cds-PMC18374.1;Parent=gene-CJ235_08045;Dbxref=NCBI_GP:PMC18374.1;Name=PMC18374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470971.1;locus_tag=CJ235_08045;product=malonic semialdehyde reductase;protein_id=PMC18374.1;transl_table=11 PNGG01000004.1 Genbank gene 39204 39569 . + . ID=gene-CJ235_08050;Name=CJ235_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08050 PNGG01000004.1 Protein Homology CDS 39204 39569 . + 0 ID=cds-PMC18375.1;Parent=gene-CJ235_08050;Dbxref=NCBI_GP:PMC18375.1;Name=PMC18375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00011.19;locus_tag=CJ235_08050;product=heat-shock protein;protein_id=PMC18375.1;transl_table=11 PNGG01000004.1 Genbank gene 39697 40119 . + . ID=gene-CJ235_08055;Name=CJ235_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08055 PNGG01000004.1 Protein Homology CDS 39697 40119 . + 0 ID=cds-PMC18376.1;Parent=gene-CJ235_08055;Dbxref=NCBI_GP:PMC18376.1;Name=PMC18376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482456.1;locus_tag=CJ235_08055;product=Hsp20/alpha crystallin family protein;protein_id=PMC18376.1;transl_table=11 PNGG01000004.1 Genbank gene 40284 41453 . - . ID=gene-CJ235_08060;Name=CJ235_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08060 PNGG01000004.1 Protein Homology CDS 40284 41453 . - 0 ID=cds-PMC18377.1;Parent=gene-CJ235_08060;Dbxref=NCBI_GP:PMC18377.1;Name=PMC18377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723263.1;locus_tag=CJ235_08060;product=NarK/NasA family nitrate transporter;protein_id=PMC18377.1;transl_table=11 PNGG01000004.1 Genbank gene 41859 42512 . - . ID=gene-CJ235_08065;Name=CJ235_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08065 PNGG01000004.1 Protein Homology CDS 41859 42512 . - 0 ID=cds-PMC18378.1;Parent=gene-CJ235_08065;Dbxref=NCBI_GP:PMC18378.1;Name=PMC18378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460273.1;locus_tag=CJ235_08065;product=DNA-binding response regulator;protein_id=PMC18378.1;transl_table=11 PNGG01000004.1 Genbank gene 42537 43571 . - . ID=gene-CJ235_08070;Name=CJ235_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08070 PNGG01000004.1 Protein Homology CDS 42537 43571 . - 0 ID=cds-PMC18379.1;Parent=gene-CJ235_08070;Dbxref=NCBI_GP:PMC18379.1;Name=PMC18379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274984.1;locus_tag=CJ235_08070;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=PMC18379.1;transl_table=11 PNGG01000004.1 Genbank gene 43580 44032 . - . ID=gene-CJ235_08075;Name=CJ235_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08075 PNGG01000004.1 Protein Homology CDS 43580 44032 . - 0 ID=cds-PMC18380.1;Parent=gene-CJ235_08075;Dbxref=NCBI_GP:PMC18380.1;Name=PMC18380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723266.1;locus_tag=CJ235_08075;product=GAF domain-containing protein;protein_id=PMC18380.1;transl_table=11 PNGG01000004.1 Genbank gene 44047 44724 . - . ID=gene-CJ235_08080;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CJ235_08080 PNGG01000004.1 Protein Homology CDS 44047 44724 . - 0 ID=cds-PMC18381.1;Parent=gene-CJ235_08080;Dbxref=NCBI_GP:PMC18381.1;Name=PMC18381.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167971.1;locus_tag=CJ235_08080;product=respiratory nitrate reductase subunit gamma;protein_id=PMC18381.1;transl_table=11 PNGG01000004.1 Genbank gene 44726 45292 . - . ID=gene-CJ235_08085;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CJ235_08085 PNGG01000004.1 Protein Homology CDS 44726 45292 . - 0 ID=cds-PMC18382.1;Parent=gene-CJ235_08085;Dbxref=NCBI_GP:PMC18382.1;Name=PMC18382.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471446.1;locus_tag=CJ235_08085;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=PMC18382.1;transl_table=11 PNGG01000004.1 Genbank gene 45285 46853 . - . ID=gene-CJ235_08090;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CJ235_08090 PNGG01000004.1 Protein Homology CDS 45285 46853 . - 0 ID=cds-PMC18383.1;Parent=gene-CJ235_08090;Dbxref=NCBI_GP:PMC18383.1;Name=PMC18383.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765529.1;locus_tag=CJ235_08090;product=nitrate reductase subunit beta;protein_id=PMC18383.1;transl_table=11 PNGG01000004.1 Genbank pseudogene 46843 50526 . - . ID=gene-CJ235_08095;Name=CJ235_08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_08095;pseudo=true PNGG01000004.1 Protein Homology CDS 46843 50526 . - 0 ID=cds-CJ235_08095;Parent=gene-CJ235_08095;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765530.1;locus_tag=CJ235_08095;product=nitrate reductase subunit alpha;pseudo=true;transl_table=11 PNGG01000004.1 Genbank gene 50828 51721 . - . ID=gene-CJ235_08100;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CJ235_08100 PNGG01000004.1 Protein Homology CDS 50828 51721 . - 0 ID=cds-PMC18384.1;Parent=gene-CJ235_08100;Dbxref=NCBI_GP:PMC18384.1;Name=PMC18384.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479733.1;locus_tag=CJ235_08100;product=uroporphyrinogen-III C-methyltransferase;protein_id=PMC18384.1;transl_table=11 PNGG01000004.1 Genbank gene 51712 52026 . - . ID=gene-CJ235_08105;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CJ235_08105 PNGG01000004.1 Protein Homology CDS 51712 52026 . - 0 ID=cds-PMC18385.1;Parent=gene-CJ235_08105;Dbxref=NCBI_GP:PMC18385.1;Name=PMC18385.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501145.1;locus_tag=CJ235_08105;product=nitrite reductase (NAD(P)H) small subunit;protein_id=PMC18385.1;transl_table=11 PNGG01000004.1 Genbank gene 52028 54430 . - . ID=gene-CJ235_08110;Name=CJ235_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08110 PNGG01000004.1 Protein Homology CDS 52028 54430 . - 0 ID=cds-PMC18386.1;Parent=gene-CJ235_08110;Dbxref=NCBI_GP:PMC18386.1;Name=PMC18386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471443.1;locus_tag=CJ235_08110;product=nitrite reductase large subunit;protein_id=PMC18386.1;transl_table=11 PNGG01000004.1 Genbank gene 54520 55221 . - . ID=gene-CJ235_08115;Name=CJ235_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08115 PNGG01000004.1 Protein Homology CDS 54520 55221 . - 0 ID=cds-PMC18387.1;Parent=gene-CJ235_08115;Dbxref=NCBI_GP:PMC18387.1;Name=PMC18387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01903.15;locus_tag=CJ235_08115;product=sirohydrochlorin chelatase;protein_id=PMC18387.1;transl_table=11 PNGG01000004.1 Genbank gene 55385 55915 . - . ID=gene-CJ235_08120;Name=CJ235_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08120 PNGG01000004.1 Protein Homology CDS 55385 55915 . - 0 ID=cds-PMC18388.1;Parent=gene-CJ235_08120;Dbxref=NCBI_GP:PMC18388.1;Name=PMC18388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471456.1;locus_tag=CJ235_08120;product=N-acetyltransferase;protein_id=PMC18388.1;transl_table=11 PNGG01000004.1 Genbank gene 56091 56438 . + . ID=gene-CJ235_08125;Name=CJ235_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08125 PNGG01000004.1 GeneMarkS+ CDS 56091 56438 . + 0 ID=cds-PMC18389.1;Parent=gene-CJ235_08125;Dbxref=NCBI_GP:PMC18389.1;Name=PMC18389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08125;product=hypothetical protein;protein_id=PMC18389.1;transl_table=11 PNGG01000004.1 Genbank gene 56762 57580 . - . ID=gene-CJ235_08130;Name=CJ235_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08130 PNGG01000004.1 Protein Homology CDS 56762 57580 . - 0 ID=cds-PMC18564.1;Parent=gene-CJ235_08130;Dbxref=NCBI_GP:PMC18564.1;Name=PMC18564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460287.1;locus_tag=CJ235_08130;product=formate/nitrite transporter;protein_id=PMC18564.1;transl_table=11 PNGG01000004.1 Genbank gene 58063 58542 . - . ID=gene-CJ235_08135;Name=CJ235_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08135 PNGG01000004.1 Protein Homology CDS 58063 58542 . - 0 ID=cds-PMC18390.1;Parent=gene-CJ235_08135;Dbxref=NCBI_GP:PMC18390.1;Name=PMC18390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471453.1;locus_tag=CJ235_08135;product=SRPBCC domain-containing protein;protein_id=PMC18390.1;transl_table=11 PNGG01000004.1 Genbank gene 59887 60225 . + . ID=gene-CJ235_08140;Name=CJ235_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08140 PNGG01000004.1 Protein Homology CDS 59887 60225 . + 0 ID=cds-PMC18391.1;Parent=gene-CJ235_08140;Dbxref=NCBI_GP:PMC18391.1;Name=PMC18391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506789.1;locus_tag=CJ235_08140;product=PadR family transcriptional regulator;protein_id=PMC18391.1;transl_table=11 PNGG01000004.1 Genbank gene 60218 60970 . + . ID=gene-CJ235_08145;Name=CJ235_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08145 PNGG01000004.1 GeneMarkS+ CDS 60218 60970 . + 0 ID=cds-PMC18392.1;Parent=gene-CJ235_08145;Dbxref=NCBI_GP:PMC18392.1;Name=PMC18392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08145;product=hypothetical protein;protein_id=PMC18392.1;transl_table=11 PNGG01000004.1 Genbank gene 61034 61549 . - . ID=gene-CJ235_08150;Name=CJ235_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08150 PNGG01000004.1 Protein Homology CDS 61034 61549 . - 0 ID=cds-PMC18393.1;Parent=gene-CJ235_08150;Dbxref=NCBI_GP:PMC18393.1;Name=PMC18393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901145.1;locus_tag=CJ235_08150;product=polyisoprenoid-binding protein;protein_id=PMC18393.1;transl_table=11 PNGG01000004.1 Genbank gene 61802 62425 . - . ID=gene-CJ235_08155;Name=CJ235_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08155 PNGG01000004.1 Protein Homology CDS 61802 62425 . - 0 ID=cds-PMC18394.1;Parent=gene-CJ235_08155;Dbxref=NCBI_GP:PMC18394.1;Name=PMC18394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471390.1;locus_tag=CJ235_08155;product=protein-disulfide isomerase;protein_id=PMC18394.1;transl_table=11 PNGG01000004.1 Genbank gene 62444 62818 . - . ID=gene-CJ235_08160;Name=CJ235_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08160 PNGG01000004.1 Protein Homology CDS 62444 62818 . - 0 ID=cds-PMC18395.1;Parent=gene-CJ235_08160;Dbxref=NCBI_GP:PMC18395.1;Name=PMC18395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471391.1;locus_tag=CJ235_08160;product=cystatin-like fold lipoprotein;protein_id=PMC18395.1;transl_table=11 PNGG01000004.1 Genbank gene 63091 64335 . + . ID=gene-CJ235_08165;Name=CJ235_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08165 PNGG01000004.1 Protein Homology CDS 63091 64335 . + 0 ID=cds-PMC18396.1;Parent=gene-CJ235_08165;Dbxref=NCBI_GP:PMC18396.1;Name=PMC18396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471389.1;locus_tag=CJ235_08165;product=aminoacyltransferase;protein_id=PMC18396.1;transl_table=11 PNGG01000004.1 Genbank gene 64448 64792 . - . ID=gene-CJ235_08170;Name=CJ235_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08170 PNGG01000004.1 Protein Homology CDS 64448 64792 . - 0 ID=cds-PMC18397.1;Parent=gene-CJ235_08170;Dbxref=NCBI_GP:PMC18397.1;Name=PMC18397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471393.1;locus_tag=CJ235_08170;product=ASCH domain-containing protein;protein_id=PMC18397.1;transl_table=11 PNGG01000004.1 Genbank gene 64866 66326 . - . ID=gene-CJ235_08175;Name=CJ235_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08175 PNGG01000004.1 Protein Homology CDS 64866 66326 . - 0 ID=cds-PMC18398.1;Parent=gene-CJ235_08175;Dbxref=NCBI_GP:PMC18398.1;Name=PMC18398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471395.1;locus_tag=CJ235_08175;product=MFS transporter;protein_id=PMC18398.1;transl_table=11 PNGG01000004.1 Genbank gene 66564 67250 . - . ID=gene-CJ235_08180;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CJ235_08180 PNGG01000004.1 Protein Homology CDS 66564 67250 . - 0 ID=cds-PMC18399.1;Parent=gene-CJ235_08180;Dbxref=NCBI_GP:PMC18399.1;Name=PMC18399.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468820.1;locus_tag=CJ235_08180;product=phosphoglycerate mutase;protein_id=PMC18399.1;transl_table=11 PNGG01000004.1 Genbank gene 67587 67952 . + . ID=gene-CJ235_08185;Name=CJ235_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08185 PNGG01000004.1 Protein Homology CDS 67587 67952 . + 0 ID=cds-PMC18400.1;Parent=gene-CJ235_08185;Dbxref=NCBI_GP:PMC18400.1;Name=PMC18400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506777.1;locus_tag=CJ235_08185;product=hypothetical protein;protein_id=PMC18400.1;transl_table=11 PNGG01000004.1 Genbank gene 68071 68943 . - . ID=gene-CJ235_08190;Name=CJ235_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08190 PNGG01000004.1 Protein Homology CDS 68071 68943 . - 0 ID=cds-PMC18401.1;Parent=gene-CJ235_08190;Dbxref=NCBI_GP:PMC18401.1;Name=PMC18401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453934.1;locus_tag=CJ235_08190;product=cation-efflux pump FieF;protein_id=PMC18401.1;transl_table=11 PNGG01000004.1 Genbank gene 69143 69526 . - . ID=gene-CJ235_08195;Name=CJ235_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08195 PNGG01000004.1 Protein Homology CDS 69143 69526 . - 0 ID=cds-PMC18402.1;Parent=gene-CJ235_08195;Dbxref=NCBI_GP:PMC18402.1;Name=PMC18402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456051.1;locus_tag=CJ235_08195;product=GtrA family protein;protein_id=PMC18402.1;transl_table=11 PNGG01000004.1 Genbank gene 69798 70958 . + . ID=gene-CJ235_08200;Name=CJ235_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08200 PNGG01000004.1 Protein Homology CDS 69798 70958 . + 0 ID=cds-PMC18403.1;Parent=gene-CJ235_08200;Dbxref=NCBI_GP:PMC18403.1;Name=PMC18403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471392.1;locus_tag=CJ235_08200;product=glycerate kinase;protein_id=PMC18403.1;transl_table=11 PNGG01000004.1 Genbank gene 71001 72200 . + . ID=gene-CJ235_08205;Name=CJ235_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08205 PNGG01000004.1 Protein Homology CDS 71001 72200 . + 0 ID=cds-PMC18404.1;Parent=gene-CJ235_08205;Dbxref=NCBI_GP:PMC18404.1;Name=PMC18404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722773.1;locus_tag=CJ235_08205;product=Bcr/CflA family drug resistance efflux transporter;protein_id=PMC18404.1;transl_table=11 PNGG01000004.1 Genbank gene 73062 73676 . + . ID=gene-CJ235_08210;Name=CJ235_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08210 PNGG01000004.1 Protein Homology CDS 73062 73676 . + 0 ID=cds-PMC18405.1;Parent=gene-CJ235_08210;Dbxref=NCBI_GP:PMC18405.1;Name=PMC18405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471397.1;locus_tag=CJ235_08210;product=hypothetical protein;protein_id=PMC18405.1;transl_table=11 PNGG01000004.1 Genbank gene 73710 74519 . - . ID=gene-CJ235_08215;Name=CJ235_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08215 PNGG01000004.1 Protein Homology CDS 73710 74519 . - 0 ID=cds-PMC18406.1;Parent=gene-CJ235_08215;Dbxref=NCBI_GP:PMC18406.1;Name=PMC18406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471394.1;locus_tag=CJ235_08215;product=phosphohydrolase;protein_id=PMC18406.1;transl_table=11 PNGG01000004.1 Genbank gene 74766 76790 . + . ID=gene-CJ235_08220;Name=CJ235_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08220 PNGG01000004.1 Protein Homology CDS 74766 76790 . + 0 ID=cds-PMC18407.1;Parent=gene-CJ235_08220;Dbxref=NCBI_GP:PMC18407.1;Name=PMC18407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471398.1;locus_tag=CJ235_08220;product=sodium:proton antiporter;protein_id=PMC18407.1;transl_table=11 PNGG01000004.1 Genbank gene 77765 78586 . + . ID=gene-CJ235_08225;Name=CJ235_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08225 PNGG01000004.1 Protein Homology CDS 77765 78586 . + 0 ID=cds-PMC18408.1;Parent=gene-CJ235_08225;Dbxref=NCBI_GP:PMC18408.1;Name=PMC18408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485922.1;locus_tag=CJ235_08225;product=hypothetical protein;protein_id=PMC18408.1;transl_table=11 PNGG01000004.1 Genbank gene 78694 79176 . - . ID=gene-CJ235_08230;Name=CJ235_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08230 PNGG01000004.1 Protein Homology CDS 78694 79176 . - 0 ID=cds-PMC18409.1;Parent=gene-CJ235_08230;Dbxref=NCBI_GP:PMC18409.1;Name=PMC18409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471014.1;locus_tag=CJ235_08230;product=DUF1440 domain-containing protein;protein_id=PMC18409.1;transl_table=11 PNGG01000004.1 Genbank gene 79262 79702 . - . ID=gene-CJ235_08235;Name=CJ235_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08235 PNGG01000004.1 Protein Homology CDS 79262 79702 . - 0 ID=cds-PMC18410.1;Parent=gene-CJ235_08235;Dbxref=NCBI_GP:PMC18410.1;Name=PMC18410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471030.1;locus_tag=CJ235_08235;product=DUF805 domain-containing protein;protein_id=PMC18410.1;transl_table=11 PNGG01000004.1 Genbank gene 79816 81207 . - . ID=gene-CJ235_08240;Name=CJ235_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08240 PNGG01000004.1 Protein Homology CDS 79816 81207 . - 0 ID=cds-PMC18411.1;Parent=gene-CJ235_08240;Dbxref=NCBI_GP:PMC18411.1;Name=PMC18411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471019.1;locus_tag=CJ235_08240;product=MFS transporter;protein_id=PMC18411.1;transl_table=11 PNGG01000004.1 Genbank gene 81627 83402 . + . ID=gene-CJ235_08245;Name=CJ235_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08245 PNGG01000004.1 Protein Homology CDS 81627 83402 . + 0 ID=cds-PMC18565.1;Parent=gene-CJ235_08245;Dbxref=NCBI_GP:PMC18565.1;Name=PMC18565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368660.1;locus_tag=CJ235_08245;product=sensor histidine kinase;protein_id=PMC18565.1;transl_table=11 PNGG01000004.1 Genbank gene 83383 84150 . + . ID=gene-CJ235_08250;Name=CJ235_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08250 PNGG01000004.1 Protein Homology CDS 83383 84150 . + 0 ID=cds-PMC18412.1;Parent=gene-CJ235_08250;Dbxref=NCBI_GP:PMC18412.1;Name=PMC18412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471020.1;locus_tag=CJ235_08250;product=DNA-binding response regulator;protein_id=PMC18412.1;transl_table=11 PNGG01000004.1 Genbank gene 84271 84729 . + . ID=gene-CJ235_08255;Name=CJ235_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08255 PNGG01000004.1 Protein Homology CDS 84271 84729 . + 0 ID=cds-PMC18413.1;Parent=gene-CJ235_08255;Dbxref=NCBI_GP:PMC18413.1;Name=PMC18413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383221.1;locus_tag=CJ235_08255;product=murein hydrolase transporter LrgA;protein_id=PMC18413.1;transl_table=11 PNGG01000004.1 Genbank gene 84729 85436 . + . ID=gene-CJ235_08260;Name=CJ235_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08260 PNGG01000004.1 Protein Homology CDS 84729 85436 . + 0 ID=cds-PMC18414.1;Parent=gene-CJ235_08260;Dbxref=NCBI_GP:PMC18414.1;Name=PMC18414.1;Note=in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453952.1;locus_tag=CJ235_08260;product=antiholin LrgB;protein_id=PMC18414.1;transl_table=11 PNGG01000004.1 Genbank gene 86615 87295 . - . ID=gene-CJ235_08265;Name=CJ235_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08265 PNGG01000004.1 Protein Homology CDS 86615 87295 . - 0 ID=cds-PMC18415.1;Parent=gene-CJ235_08265;Dbxref=NCBI_GP:PMC18415.1;Name=PMC18415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460346.1;locus_tag=CJ235_08265;product=ABC transporter permease;protein_id=PMC18415.1;transl_table=11 PNGG01000004.1 Genbank gene 87295 88233 . - . ID=gene-CJ235_08270;Name=CJ235_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08270 PNGG01000004.1 Protein Homology CDS 87295 88233 . - 0 ID=cds-PMC18416.1;Parent=gene-CJ235_08270;Dbxref=NCBI_GP:PMC18416.1;Name=PMC18416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511510.1;locus_tag=CJ235_08270;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=PMC18416.1;transl_table=11 PNGG01000004.1 Genbank gene 88250 88885 . - . ID=gene-CJ235_08275;Name=CJ235_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08275 PNGG01000004.1 Protein Homology CDS 88250 88885 . - 0 ID=cds-PMC18417.1;Parent=gene-CJ235_08275;Dbxref=NCBI_GP:PMC18417.1;Name=PMC18417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510035.1;locus_tag=CJ235_08275;product=ABC transporter permease;protein_id=PMC18417.1;transl_table=11 PNGG01000004.1 Genbank gene 88882 90063 . - . ID=gene-CJ235_08280;Name=CJ235_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08280 PNGG01000004.1 Protein Homology CDS 88882 90063 . - 0 ID=cds-PMC18418.1;Parent=gene-CJ235_08280;Dbxref=NCBI_GP:PMC18418.1;Name=PMC18418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470114.1;locus_tag=CJ235_08280;product=CBS domain-containing protein;protein_id=PMC18418.1;transl_table=11 PNGG01000004.1 Genbank gene 90788 91381 . - . ID=gene-CJ235_08285;Name=CJ235_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08285 PNGG01000004.1 Protein Homology CDS 90788 91381 . - 0 ID=cds-PMC18419.1;Parent=gene-CJ235_08285;Dbxref=NCBI_GP:PMC18419.1;Name=PMC18419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460352.1;locus_tag=CJ235_08285;product=hypothetical protein;protein_id=PMC18419.1;transl_table=11 PNGG01000004.1 Genbank gene 91610 92980 . + . ID=gene-CJ235_08290;Name=CJ235_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08290 PNGG01000004.1 Protein Homology CDS 91610 92980 . + 0 ID=cds-PMC18420.1;Parent=gene-CJ235_08290;Dbxref=NCBI_GP:PMC18420.1;Name=PMC18420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501395.1;locus_tag=CJ235_08290;product=citrate transporter;protein_id=PMC18420.1;transl_table=11 PNGG01000004.1 Genbank gene 93065 94228 . - . ID=gene-CJ235_08295;Name=CJ235_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08295 PNGG01000004.1 Protein Homology CDS 93065 94228 . - 0 ID=cds-PMC18421.1;Parent=gene-CJ235_08295;Dbxref=NCBI_GP:PMC18421.1;Name=PMC18421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471018.1;locus_tag=CJ235_08295;product=MFS transporter;protein_id=PMC18421.1;transl_table=11 PNGG01000004.1 Genbank gene 94505 95263 . - . ID=gene-CJ235_08300;Name=CJ235_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08300 PNGG01000004.1 Protein Homology CDS 94505 95263 . - 0 ID=cds-PMC18422.1;Parent=gene-CJ235_08300;Dbxref=NCBI_GP:PMC18422.1;Name=PMC18422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506747.1;locus_tag=CJ235_08300;product=iron export ABC transporter permease subunit FetB;protein_id=PMC18422.1;transl_table=11 PNGG01000004.1 Genbank gene 95260 95910 . - . ID=gene-CJ235_08305;Name=CJ235_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08305 PNGG01000004.1 Protein Homology CDS 95260 95910 . - 0 ID=cds-PMC18423.1;Parent=gene-CJ235_08305;Dbxref=NCBI_GP:PMC18423.1;Name=PMC18423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482400.1;locus_tag=CJ235_08305;product=iron ABC transporter ATP-binding protein FetA;protein_id=PMC18423.1;transl_table=11 PNGG01000004.1 Genbank gene 96204 96959 . - . ID=gene-CJ235_08310;Name=CJ235_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08310 PNGG01000004.1 Protein Homology CDS 96204 96959 . - 0 ID=cds-PMC18424.1;Parent=gene-CJ235_08310;Dbxref=NCBI_GP:PMC18424.1;Name=PMC18424.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02517.14;locus_tag=CJ235_08310;product=CPBP family intramembrane metalloprotease;protein_id=PMC18424.1;transl_table=11 PNGG01000004.1 Genbank gene 97008 97781 . - . ID=gene-CJ235_08315;Name=CJ235_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08315 PNGG01000004.1 Protein Homology CDS 97008 97781 . - 0 ID=cds-PMC18425.1;Parent=gene-CJ235_08315;Dbxref=NCBI_GP:PMC18425.1;Name=PMC18425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901184.1;locus_tag=CJ235_08315;product=CPBP family intramembrane metalloprotease;protein_id=PMC18425.1;transl_table=11 PNGG01000004.1 Genbank gene 98010 99086 . + . ID=gene-CJ235_08320;Name=CJ235_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08320 PNGG01000004.1 Protein Homology CDS 98010 99086 . + 0 ID=cds-PMC18426.1;Parent=gene-CJ235_08320;Dbxref=NCBI_GP:PMC18426.1;Name=PMC18426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506742.1;locus_tag=CJ235_08320;product=M42 family peptidase;protein_id=PMC18426.1;transl_table=11 PNGG01000004.1 Genbank gene 99209 100024 . - . ID=gene-CJ235_08325;Name=CJ235_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08325 PNGG01000004.1 Protein Homology CDS 99209 100024 . - 0 ID=cds-PMC18427.1;Parent=gene-CJ235_08325;Dbxref=NCBI_GP:PMC18427.1;Name=PMC18427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473015.1;locus_tag=CJ235_08325;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=PMC18427.1;transl_table=11 PNGG01000004.1 Genbank pseudogene 100247 101745 . + . ID=gene-CJ235_08330;Name=CJ235_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_08330;pseudo=true PNGG01000004.1 Protein Homology CDS 100247 101745 . + 0 ID=cds-CJ235_08330;Parent=gene-CJ235_08330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274914.1;locus_tag=CJ235_08330;product=aminobenzoyl-glutamate transporter;pseudo=true;transl_table=11 PNGG01000004.1 Genbank gene 101830 102462 . - . ID=gene-CJ235_08335;Name=CJ235_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08335 PNGG01000004.1 GeneMarkS+ CDS 101830 102462 . - 0 ID=cds-PMC18428.1;Parent=gene-CJ235_08335;Dbxref=NCBI_GP:PMC18428.1;Name=PMC18428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08335;product=hypothetical protein;protein_id=PMC18428.1;transl_table=11 PNGG01000004.1 Genbank gene 102716 104035 . + . ID=gene-CJ235_08340;Name=CJ235_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08340 PNGG01000004.1 Protein Homology CDS 102716 104035 . + 0 ID=cds-PMC18429.1;Parent=gene-CJ235_08340;Dbxref=NCBI_GP:PMC18429.1;Name=PMC18429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473008.1;locus_tag=CJ235_08340;product=D-serine ammonia-lyase;protein_id=PMC18429.1;transl_table=11 PNGG01000004.1 Genbank gene 104105 104806 . - . ID=gene-CJ235_08345;Name=CJ235_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08345 PNGG01000004.1 Protein Homology CDS 104105 104806 . - 0 ID=cds-PMC18430.1;Parent=gene-CJ235_08345;Dbxref=NCBI_GP:PMC18430.1;Name=PMC18430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506722.1;locus_tag=CJ235_08345;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=PMC18430.1;transl_table=11 PNGG01000004.1 Genbank gene 104823 105251 . - . ID=gene-CJ235_08350;Name=CJ235_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08350 PNGG01000004.1 Protein Homology CDS 104823 105251 . - 0 ID=cds-PMC18431.1;Parent=gene-CJ235_08350;Dbxref=NCBI_GP:PMC18431.1;Name=PMC18431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473011.1;locus_tag=CJ235_08350;product=GNAT family N-acetyltransferase;protein_id=PMC18431.1;transl_table=11 PNGG01000004.1 Genbank gene 105888 106160 . + . ID=gene-CJ235_08355;Name=CJ235_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08355 PNGG01000004.1 Protein Homology CDS 105888 106160 . + 0 ID=cds-PMC18432.1;Parent=gene-CJ235_08355;Dbxref=NCBI_GP:PMC18432.1;Name=PMC18432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471715.1;locus_tag=CJ235_08355;product=DUF1413 domain-containing protein;protein_id=PMC18432.1;transl_table=11 PNGG01000004.1 Genbank gene 106865 108223 . - . ID=gene-CJ235_08360;Name=CJ235_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08360 PNGG01000004.1 Protein Homology CDS 106865 108223 . - 0 ID=cds-PMC18433.1;Parent=gene-CJ235_08360;Dbxref=NCBI_GP:PMC18433.1;Name=PMC18433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501265.1;locus_tag=CJ235_08360;product=gluconate permease;protein_id=PMC18433.1;transl_table=11 PNGG01000004.1 Genbank gene 108266 109813 . - . ID=gene-CJ235_08365;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CJ235_08365 PNGG01000004.1 Protein Homology CDS 108266 109813 . - 0 ID=cds-PMC18434.1;Parent=gene-CJ235_08365;Dbxref=NCBI_GP:PMC18434.1;Name=PMC18434.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471710.1;locus_tag=CJ235_08365;product=gluconokinase;protein_id=PMC18434.1;transl_table=11 PNGG01000004.1 Genbank gene 110279 110821 . - . ID=gene-CJ235_08370;Name=CJ235_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08370 PNGG01000004.1 Protein Homology CDS 110279 110821 . - 0 ID=cds-PMC18435.1;Parent=gene-CJ235_08370;Dbxref=NCBI_GP:PMC18435.1;Name=PMC18435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13411.4;locus_tag=CJ235_08370;product=MerR family DNA-binding transcriptional regulator;protein_id=PMC18435.1;transl_table=11 PNGG01000004.1 Genbank gene 110942 111358 . - . ID=gene-CJ235_08375;Name=CJ235_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08375 PNGG01000004.1 Protein Homology CDS 110942 111358 . - 0 ID=cds-PMC18436.1;Parent=gene-CJ235_08375;Dbxref=NCBI_GP:PMC18436.1;Name=PMC18436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930786.1;locus_tag=CJ235_08375;product=DUF2188 domain-containing protein;protein_id=PMC18436.1;transl_table=11 PNGG01000004.1 Genbank gene 111537 112706 . + . ID=gene-CJ235_08380;Name=CJ235_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08380 PNGG01000004.1 Protein Homology CDS 111537 112706 . + 0 ID=cds-PMC18437.1;Parent=gene-CJ235_08380;Dbxref=NCBI_GP:PMC18437.1;Name=PMC18437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506708.1;locus_tag=CJ235_08380;product=hypothetical protein;protein_id=PMC18437.1;transl_table=11 PNGG01000004.1 Genbank gene 112706 113917 . + . ID=gene-CJ235_08385;Name=CJ235_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08385 PNGG01000004.1 Protein Homology CDS 112706 113917 . + 0 ID=cds-PMC18438.1;Parent=gene-CJ235_08385;Dbxref=NCBI_GP:PMC18438.1;Name=PMC18438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471703.1;locus_tag=CJ235_08385;product=5%2C10-methylene-tetrahydrofolate dehydrogenase;protein_id=PMC18438.1;transl_table=11 PNGG01000004.1 Genbank gene 114798 116687 . - . ID=gene-CJ235_08390;Name=CJ235_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08390 PNGG01000004.1 Protein Homology CDS 114798 116687 . - 0 ID=cds-PMC18439.1;Parent=gene-CJ235_08390;Dbxref=NCBI_GP:PMC18439.1;Name=PMC18439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471708.1;locus_tag=CJ235_08390;product=FUSC family protein;protein_id=PMC18439.1;transl_table=11 PNGG01000004.1 Genbank gene 116989 117687 . - . ID=gene-CJ235_08395;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CJ235_08395 PNGG01000004.1 Protein Homology CDS 116989 117687 . - 0 ID=cds-PMC18440.1;Parent=gene-CJ235_08395;Dbxref=NCBI_GP:PMC18440.1;Name=PMC18440.1;gbkey=CDS;gene=budA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506705.1;locus_tag=CJ235_08395;product=acetolactate decarboxylase;protein_id=PMC18440.1;transl_table=11 PNGG01000004.1 Genbank gene 117935 119218 . - . ID=gene-CJ235_08400;Name=CJ235_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08400 PNGG01000004.1 Protein Homology CDS 117935 119218 . - 0 ID=cds-PMC18441.1;Parent=gene-CJ235_08400;Dbxref=NCBI_GP:PMC18441.1;Name=PMC18441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471707.1;locus_tag=CJ235_08400;product=MFS transporter;protein_id=PMC18441.1;transl_table=11 PNGG01000004.1 Genbank gene 119547 120155 . + . ID=gene-CJ235_08405;Name=CJ235_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08405 PNGG01000004.1 Protein Homology CDS 119547 120155 . + 0 ID=cds-PMC18442.1;Parent=gene-CJ235_08405;Dbxref=NCBI_GP:PMC18442.1;Name=PMC18442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492486.1;locus_tag=CJ235_08405;product=DedA family protein;protein_id=PMC18442.1;transl_table=11 PNGG01000004.1 Genbank gene 120698 121324 . - . ID=gene-CJ235_08410;Name=CJ235_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08410 PNGG01000004.1 Protein Homology CDS 120698 121324 . - 0 ID=cds-PMC18443.1;Parent=gene-CJ235_08410;Dbxref=NCBI_GP:PMC18443.1;Name=PMC18443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13346.4;locus_tag=CJ235_08410;product=ABC-2 transporter permease;protein_id=PMC18443.1;transl_table=11 PNGG01000004.1 Genbank gene 121321 122175 . - . ID=gene-CJ235_08415;Name=CJ235_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08415 PNGG01000004.1 Protein Homology CDS 121321 122175 . - 0 ID=cds-PMC18444.1;Parent=gene-CJ235_08415;Dbxref=NCBI_GP:PMC18444.1;Name=PMC18444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471720.1;locus_tag=CJ235_08415;product=ABC transporter ATP-binding protein;protein_id=PMC18444.1;transl_table=11 PNGG01000004.1 Genbank gene 122418 123959 . - . ID=gene-CJ235_08420;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CJ235_08420 PNGG01000004.1 Protein Homology CDS 122418 123959 . - 0 ID=cds-PMC18445.1;Parent=gene-CJ235_08420;Dbxref=NCBI_GP:PMC18445.1;Name=PMC18445.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471718.1;locus_tag=CJ235_08420;product=sodium/proline symporter PutP;protein_id=PMC18445.1;transl_table=11 PNGG01000004.1 Genbank gene 124452 126404 . + . ID=gene-CJ235_08425;Name=CJ235_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08425 PNGG01000004.1 Protein Homology CDS 124452 126404 . + 0 ID=cds-PMC18446.1;Parent=gene-CJ235_08425;Dbxref=NCBI_GP:PMC18446.1;Name=PMC18446.1;Note=class 3%3B catalyzes the formation of fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175039.1;locus_tag=CJ235_08425;product=fructose-bisphosphatase class III;protein_id=PMC18446.1;transl_table=11 PNGG01000004.1 Genbank gene 127097 128902 . - . ID=gene-CJ235_08430;Name=CJ235_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08430 PNGG01000004.1 Protein Homology CDS 127097 128902 . - 0 ID=cds-PMC18447.1;Parent=gene-CJ235_08430;Dbxref=NCBI_GP:PMC18447.1;Name=PMC18447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471701.1;locus_tag=CJ235_08430;product=sodium:proton antiporter;protein_id=PMC18447.1;transl_table=11 PNGG01000004.1 Genbank gene 129246 130658 . + . ID=gene-CJ235_08435;Name=CJ235_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08435 PNGG01000004.1 Protein Homology CDS 129246 130658 . + 0 ID=cds-PMC18448.1;Parent=gene-CJ235_08435;Dbxref=NCBI_GP:PMC18448.1;Name=PMC18448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435042.1;locus_tag=CJ235_08435;product=anion permease;protein_id=PMC18448.1;transl_table=11 PNGG01000004.1 Genbank gene 130741 131019 . + . ID=gene-CJ235_08440;Name=CJ235_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08440 PNGG01000004.1 Protein Homology CDS 130741 131019 . + 0 ID=cds-PMC18449.1;Parent=gene-CJ235_08440;Dbxref=NCBI_GP:PMC18449.1;Name=PMC18449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482346.1;locus_tag=CJ235_08440;product=N-acetyltransferase;protein_id=PMC18449.1;transl_table=11 PNGG01000004.1 Genbank pseudogene 131102 131302 . + . ID=gene-CJ235_08445;Name=CJ235_08445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_08445;pseudo=true PNGG01000004.1 Protein Homology CDS 131102 131302 . + 0 ID=cds-CJ235_08445;Parent=gene-CJ235_08445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471713.1;locus_tag=CJ235_08445;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000004.1 Genbank gene 131465 132127 . - . ID=gene-CJ235_08450;Name=CJ235_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08450 PNGG01000004.1 Protein Homology CDS 131465 132127 . - 0 ID=cds-PMC18450.1;Parent=gene-CJ235_08450;Dbxref=NCBI_GP:PMC18450.1;Name=PMC18450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834959.1;locus_tag=CJ235_08450;product=NAD(P)H-dependent oxidoreductase;protein_id=PMC18450.1;transl_table=11 PNGG01000004.1 Genbank gene 132243 132776 . - . ID=gene-CJ235_08455;Name=CJ235_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08455 PNGG01000004.1 Protein Homology CDS 132243 132776 . - 0 ID=cds-PMC18451.1;Parent=gene-CJ235_08455;Dbxref=NCBI_GP:PMC18451.1;Name=PMC18451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471705.1;locus_tag=CJ235_08455;product=flavodoxin family protein;protein_id=PMC18451.1;transl_table=11 PNGG01000004.1 Genbank gene 133666 135195 . - . ID=gene-CJ235_08460;Name=CJ235_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08460 PNGG01000004.1 Protein Homology CDS 133666 135195 . - 0 ID=cds-PMC18452.1;Parent=gene-CJ235_08460;Dbxref=NCBI_GP:PMC18452.1;Name=PMC18452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498884.1;locus_tag=CJ235_08460;product=Na+/proline symporter;protein_id=PMC18452.1;transl_table=11 PNGG01000004.1 Genbank gene 135214 136095 . - . ID=gene-CJ235_08465;Name=CJ235_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08465 PNGG01000004.1 Protein Homology CDS 135214 136095 . - 0 ID=cds-PMC18453.1;Parent=gene-CJ235_08465;Dbxref=NCBI_GP:PMC18453.1;Name=PMC18453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460695.1;locus_tag=CJ235_08465;product=N-acetylneuraminate lyase;protein_id=PMC18453.1;transl_table=11 PNGG01000004.1 Genbank gene 136314 137186 . + . ID=gene-CJ235_08470;Name=CJ235_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08470 PNGG01000004.1 Protein Homology CDS 136314 137186 . + 0 ID=cds-PMC18454.1;Parent=gene-CJ235_08470;Dbxref=NCBI_GP:PMC18454.1;Name=PMC18454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473097.1;locus_tag=CJ235_08470;product=ROK family protein;protein_id=PMC18454.1;transl_table=11 PNGG01000004.1 Genbank gene 137273 138085 . - . ID=gene-CJ235_08475;Name=CJ235_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08475 PNGG01000004.1 Protein Homology CDS 137273 138085 . - 0 ID=cds-PMC18455.1;Parent=gene-CJ235_08475;Dbxref=NCBI_GP:PMC18455.1;Name=PMC18455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274609.1;locus_tag=CJ235_08475;product=MurR/RpiR family transcriptional regulator;protein_id=PMC18455.1;transl_table=11 PNGG01000004.1 Genbank gene 138727 139395 . + . ID=gene-CJ235_08480;Name=CJ235_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08480 PNGG01000004.1 Protein Homology CDS 138727 139395 . + 0 ID=cds-PMC18456.1;Parent=gene-CJ235_08480;Dbxref=NCBI_GP:PMC18456.1;Name=PMC18456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473104.1;locus_tag=CJ235_08480;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=PMC18456.1;transl_table=11 PNGG01000004.1 Genbank gene 139590 140204 . - . ID=gene-CJ235_08485;Name=CJ235_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08485 PNGG01000004.1 Protein Homology CDS 139590 140204 . - 0 ID=cds-PMC18457.1;Parent=gene-CJ235_08485;Dbxref=NCBI_GP:PMC18457.1;Name=PMC18457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473107.1;locus_tag=CJ235_08485;product=sortase;protein_id=PMC18457.1;transl_table=11 PNGG01000004.1 Genbank gene 140403 140894 . + . ID=gene-CJ235_08490;Name=CJ235_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08490 PNGG01000004.1 Protein Homology CDS 140403 140894 . + 0 ID=cds-PMC18458.1;Parent=gene-CJ235_08490;Dbxref=NCBI_GP:PMC18458.1;Name=PMC18458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617345.1;locus_tag=CJ235_08490;product=N-acetyltransferase;protein_id=PMC18458.1;transl_table=11 PNGG01000004.1 Genbank gene 141413 142576 . + . ID=gene-CJ235_08495;Name=CJ235_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08495 PNGG01000004.1 Protein Homology CDS 141413 142576 . + 0 ID=cds-PMC18459.1;Parent=gene-CJ235_08495;Dbxref=NCBI_GP:PMC18459.1;Name=PMC18459.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473082.1;locus_tag=CJ235_08495;product=succinyl-diaminopimelate desuccinylase;protein_id=PMC18459.1;transl_table=11 PNGG01000004.1 Genbank gene 143344 145446 . + . ID=gene-CJ235_08500;Name=CJ235_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08500 PNGG01000004.1 Protein Homology CDS 143344 145446 . + 0 ID=cds-PMC18460.1;Parent=gene-CJ235_08500;Dbxref=NCBI_GP:PMC18460.1;Name=PMC18460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12833.5;locus_tag=CJ235_08500;product=hypothetical protein;protein_id=PMC18460.1;transl_table=11 PNGG01000004.1 Genbank gene 145569 147740 . - . ID=gene-CJ235_08505;Name=CJ235_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08505 PNGG01000004.1 Protein Homology CDS 145569 147740 . - 0 ID=cds-PMC18461.1;Parent=gene-CJ235_08505;Dbxref=NCBI_GP:PMC18461.1;Name=PMC18461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473096.1;locus_tag=CJ235_08505;product=CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=PMC18461.1;transl_table=11 PNGG01000004.1 Genbank gene 148020 149516 . + . ID=gene-CJ235_08510;Name=CJ235_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08510 PNGG01000004.1 Protein Homology CDS 148020 149516 . + 0 ID=cds-PMC18462.1;Parent=gene-CJ235_08510;Dbxref=NCBI_GP:PMC18462.1;Name=PMC18462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00534.18%2CHMM:PF09318.8;locus_tag=CJ235_08510;product=glycosyl transferase family 1;protein_id=PMC18462.1;transl_table=11 PNGG01000004.1 Genbank gene 149576 151081 . + . ID=gene-CJ235_08515;Name=CJ235_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08515 PNGG01000004.1 Protein Homology CDS 149576 151081 . + 0 ID=cds-PMC18463.1;Parent=gene-CJ235_08515;Dbxref=NCBI_GP:PMC18463.1;Name=PMC18463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09318.8;locus_tag=CJ235_08515;product=glycosyl transferase family 1;protein_id=PMC18463.1;transl_table=11 PNGG01000004.1 Genbank gene 151135 151764 . - . ID=gene-CJ235_08520;Name=CJ235_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08520 PNGG01000004.1 Protein Homology CDS 151135 151764 . - 0 ID=cds-PMC18464.1;Parent=gene-CJ235_08520;Dbxref=NCBI_GP:PMC18464.1;Name=PMC18464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02585.15;locus_tag=CJ235_08520;product=PIG-L family deacetylase;protein_id=PMC18464.1;transl_table=11 PNGG01000004.1 Genbank gene 152019 152885 . - . ID=gene-CJ235_08525;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CJ235_08525 PNGG01000004.1 Protein Homology CDS 152019 152885 . - 0 ID=cds-PMC18465.1;Parent=gene-CJ235_08525;Dbxref=NCBI_GP:PMC18465.1;Name=PMC18465.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460395.1;locus_tag=CJ235_08525;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=PMC18465.1;transl_table=11 PNGG01000004.1 Genbank gene 153339 154676 . + . ID=gene-CJ235_08530;Name=CJ235_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08530 PNGG01000004.1 Protein Homology CDS 153339 154676 . + 0 ID=cds-PMC18466.1;Parent=gene-CJ235_08530;Dbxref=NCBI_GP:PMC18466.1;Name=PMC18466.1;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501377.1;locus_tag=CJ235_08530;product=aspartate aminotransferase family protein;protein_id=PMC18466.1;transl_table=11 PNGG01000004.1 Genbank gene 154708 155805 . + . ID=gene-CJ235_08535;Name=CJ235_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08535 PNGG01000004.1 Protein Homology CDS 154708 155805 . + 0 ID=cds-PMC18467.1;Parent=gene-CJ235_08535;Dbxref=NCBI_GP:PMC18467.1;Name=PMC18467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473103.1;locus_tag=CJ235_08535;product=hypothetical protein;protein_id=PMC18467.1;transl_table=11 PNGG01000004.1 Genbank pseudogene 155879 156277 . + . ID=gene-CJ235_08540;Name=CJ235_08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_08540;pseudo=true PNGG01000004.1 Protein Homology CDS 155879 156277 . + 0 ID=cds-CJ235_08540;Parent=gene-CJ235_08540;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502785.1;locus_tag=CJ235_08540;product=CHAP domain-containing protein;pseudo=true;transl_table=11 PNGG01000004.1 Genbank gene 156353 156751 . + . ID=gene-CJ235_08545;Name=CJ235_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08545 PNGG01000004.1 GeneMarkS+ CDS 156353 156751 . + 0 ID=cds-PMC18468.1;Parent=gene-CJ235_08545;Dbxref=NCBI_GP:PMC18468.1;Name=PMC18468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08545;product=hypothetical protein;protein_id=PMC18468.1;transl_table=11 PNGG01000004.1 Genbank gene 157469 159070 . - . ID=gene-CJ235_08550;Name=CJ235_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08550 PNGG01000004.1 Protein Homology CDS 157469 159070 . - 0 ID=cds-PMC18469.1;Parent=gene-CJ235_08550;Dbxref=NCBI_GP:PMC18469.1;Name=PMC18469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723740.1;locus_tag=CJ235_08550;product=gamma-glutamyltranspeptidase;protein_id=PMC18469.1;transl_table=11 PNGG01000004.1 Genbank gene 159224 160291 . - . ID=gene-CJ235_08555;Name=CJ235_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08555 PNGG01000004.1 Protein Homology CDS 159224 160291 . - 0 ID=cds-PMC18470.1;Parent=gene-CJ235_08555;Dbxref=NCBI_GP:PMC18470.1;Name=PMC18470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473085.1;locus_tag=CJ235_08555;product=capsule biosynthesis protein CapA;protein_id=PMC18470.1;transl_table=11 PNGG01000004.1 Genbank gene 160304 160756 . - . ID=gene-CJ235_08560;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=CJ235_08560 PNGG01000004.1 Protein Homology CDS 160304 160756 . - 0 ID=cds-PMC18471.1;Parent=gene-CJ235_08560;Dbxref=NCBI_GP:PMC18471.1;Name=PMC18471.1;gbkey=CDS;gene=pgsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175061.1;locus_tag=CJ235_08560;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=PMC18471.1;transl_table=11 PNGG01000004.1 Genbank gene 160758 161918 . - . ID=gene-CJ235_08565;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=CJ235_08565 PNGG01000004.1 Protein Homology CDS 160758 161918 . - 0 ID=cds-PMC18472.1;Parent=gene-CJ235_08565;Dbxref=NCBI_GP:PMC18472.1;Name=PMC18472.1;gbkey=CDS;gene=pgsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765648.1;locus_tag=CJ235_08565;product=poly-gamma-glutamate synthase PgsB;protein_id=PMC18472.1;transl_table=11 PNGG01000004.1 Genbank gene 162462 162662 . + . ID=gene-CJ235_08570;Name=CJ235_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08570 PNGG01000004.1 GeneMarkS+ CDS 162462 162662 . + 0 ID=cds-PMC18473.1;Parent=gene-CJ235_08570;Dbxref=NCBI_GP:PMC18473.1;Name=PMC18473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08570;product=hypothetical protein;protein_id=PMC18473.1;transl_table=11 PNGG01000004.1 Genbank gene 163875 165032 . + . ID=gene-CJ235_08575;Name=CJ235_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08575 PNGG01000004.1 Protein Homology CDS 163875 165032 . + 0 ID=cds-PMC18474.1;Parent=gene-CJ235_08575;Dbxref=NCBI_GP:PMC18474.1;Name=PMC18474.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471574.1;locus_tag=CJ235_08575;product=succinyl-diaminopimelate desuccinylase;protein_id=PMC18474.1;transl_table=11 PNGG01000004.1 Genbank gene 165138 166088 . - . ID=gene-CJ235_08580;Name=CJ235_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08580 PNGG01000004.1 Protein Homology CDS 165138 166088 . - 0 ID=cds-PMC18566.1;Parent=gene-CJ235_08580;Dbxref=NCBI_GP:PMC18566.1;Name=PMC18566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509570.1;locus_tag=CJ235_08580;product=alpha/beta hydrolase;protein_id=PMC18566.1;transl_table=11 PNGG01000004.1 Genbank gene 166817 167329 . - . ID=gene-CJ235_08585;Name=CJ235_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08585 PNGG01000004.1 Protein Homology CDS 166817 167329 . - 0 ID=cds-PMC18475.1;Parent=gene-CJ235_08585;Dbxref=NCBI_GP:PMC18475.1;Name=PMC18475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470893.1;locus_tag=CJ235_08585;product=N-acetyltransferase;protein_id=PMC18475.1;transl_table=11 PNGG01000004.1 Genbank gene 167471 167803 . - . ID=gene-CJ235_08590;Name=CJ235_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08590 PNGG01000004.1 Protein Homology CDS 167471 167803 . - 0 ID=cds-PMC18476.1;Parent=gene-CJ235_08590;Dbxref=NCBI_GP:PMC18476.1;Name=PMC18476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723751.1;locus_tag=CJ235_08590;product=thioredoxin;protein_id=PMC18476.1;transl_table=11 PNGG01000004.1 Genbank pseudogene 167973 168940 . - . ID=gene-CJ235_08595;Name=CJ235_08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_08595;pseudo=true PNGG01000004.1 Protein Homology CDS 167973 168940 . - 0 ID=cds-CJ235_08595;Parent=gene-CJ235_08595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470882.1;locus_tag=CJ235_08595;product=D-cysteine desulfhydrase family protein;pseudo=true;transl_table=11 PNGG01000004.1 Genbank gene 168962 169498 . - . ID=gene-CJ235_08600;Name=CJ235_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08600 PNGG01000004.1 Protein Homology CDS 168962 169498 . - 0 ID=cds-PMC18477.1;Parent=gene-CJ235_08600;Dbxref=NCBI_GP:PMC18477.1;Name=PMC18477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274495.1;locus_tag=CJ235_08600;product=VOC family protein;protein_id=PMC18477.1;transl_table=11 PNGG01000004.1 Genbank gene 169523 170086 . - . ID=gene-CJ235_08605;Name=CJ235_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08605 PNGG01000004.1 Protein Homology CDS 169523 170086 . - 0 ID=cds-PMC18478.1;Parent=gene-CJ235_08605;Dbxref=NCBI_GP:PMC18478.1;Name=PMC18478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13420.5;locus_tag=CJ235_08605;product=N-acetyltransferase;protein_id=PMC18478.1;transl_table=11 PNGG01000004.1 Genbank gene 170197 171585 . - . ID=gene-CJ235_08610;Name=CJ235_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08610 PNGG01000004.1 Protein Homology CDS 170197 171585 . - 0 ID=cds-PMC18479.1;Parent=gene-CJ235_08610;Dbxref=NCBI_GP:PMC18479.1;Name=PMC18479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470019.1;locus_tag=CJ235_08610;product=YfcC family protein;protein_id=PMC18479.1;transl_table=11 PNGG01000004.1 Genbank gene 171850 173592 . - . ID=gene-CJ235_08615;Name=CJ235_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08615 PNGG01000004.1 Protein Homology CDS 171850 173592 . - 0 ID=cds-PMC18480.1;Parent=gene-CJ235_08615;Dbxref=NCBI_GP:PMC18480.1;Name=PMC18480.1;Note=catalyzes the formation of acetyl phosphate from pyruvate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019470018.1;locus_tag=CJ235_08615;product=pyruvate oxidase;protein_id=PMC18480.1;transl_table=11 PNGG01000004.1 Genbank gene 173674 174360 . - . ID=gene-CJ235_08620;Name=CJ235_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08620 PNGG01000004.1 Protein Homology CDS 173674 174360 . - 0 ID=cds-PMC18481.1;Parent=gene-CJ235_08620;Dbxref=NCBI_GP:PMC18481.1;Name=PMC18481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501307.1;locus_tag=CJ235_08620;product=LrgB family protein;protein_id=PMC18481.1;transl_table=11 PNGG01000004.1 Genbank gene 174357 174746 . - . ID=gene-CJ235_08625;Name=CJ235_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08625 PNGG01000004.1 Protein Homology CDS 174357 174746 . - 0 ID=cds-PMC18482.1;Parent=gene-CJ235_08625;Dbxref=NCBI_GP:PMC18482.1;Name=PMC18482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765660.1;locus_tag=CJ235_08625;product=CidA/LrgA family protein;protein_id=PMC18482.1;transl_table=11 PNGG01000004.1 Genbank gene 174907 175782 . - . ID=gene-CJ235_08630;Name=CJ235_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08630 PNGG01000004.1 Protein Homology CDS 174907 175782 . - 0 ID=cds-PMC18483.1;Parent=gene-CJ235_08630;Dbxref=NCBI_GP:PMC18483.1;Name=PMC18483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175071.1;locus_tag=CJ235_08630;product=LysR family transcriptional regulator;protein_id=PMC18483.1;transl_table=11 PNGG01000004.1 Genbank gene 176022 176237 . + . ID=gene-CJ235_08635;Name=CJ235_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08635 PNGG01000004.1 Protein Homology CDS 176022 176237 . + 0 ID=cds-PMC18484.1;Parent=gene-CJ235_08635;Dbxref=NCBI_GP:PMC18484.1;Name=PMC18484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765662.1;locus_tag=CJ235_08635;product=hypothetical protein;protein_id=PMC18484.1;transl_table=11 PNGG01000004.1 Genbank gene 176457 177911 . - . ID=gene-CJ235_08640;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CJ235_08640 PNGG01000004.1 Protein Homology CDS 176457 177911 . - 0 ID=cds-PMC18485.1;Parent=gene-CJ235_08640;Dbxref=NCBI_GP:PMC18485.1;Name=PMC18485.1;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509703.1;locus_tag=CJ235_08640;product=Na+/H+ antiporter NhaC;protein_id=PMC18485.1;transl_table=11 PNGG01000004.1 Genbank gene 178205 179485 . - . ID=gene-CJ235_08645;Name=CJ235_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08645 PNGG01000004.1 Protein Homology CDS 178205 179485 . - 0 ID=cds-PMC18486.1;Parent=gene-CJ235_08645;Dbxref=NCBI_GP:PMC18486.1;Name=PMC18486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302305.1;locus_tag=CJ235_08645;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=PMC18486.1;transl_table=11 PNGG01000004.1 Genbank gene 179489 180640 . - . ID=gene-CJ235_08650;Name=CJ235_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08650 PNGG01000004.1 Protein Homology CDS 179489 180640 . - 0 ID=cds-PMC18487.1;Parent=gene-CJ235_08650;Dbxref=NCBI_GP:PMC18487.1;Name=PMC18487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901126.1;locus_tag=CJ235_08650;product=acetyl-CoA C-acyltransferase;protein_id=PMC18487.1;transl_table=11 PNGG01000004.1 Genbank gene 180741 181907 . + . ID=gene-CJ235_08655;Name=CJ235_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08655 PNGG01000004.1 Protein Homology CDS 180741 181907 . + 0 ID=cds-PMC18488.1;Parent=gene-CJ235_08655;Dbxref=NCBI_GP:PMC18488.1;Name=PMC18488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901127.1;locus_tag=CJ235_08655;product=hydroxymethylglutaryl-CoA synthase;protein_id=PMC18488.1;transl_table=11 PNGG01000004.1 Genbank gene 182072 182593 . - . ID=gene-CJ235_08660;Name=CJ235_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08660 PNGG01000004.1 Protein Homology CDS 182072 182593 . - 0 ID=cds-PMC18489.1;Parent=gene-CJ235_08660;Dbxref=NCBI_GP:PMC18489.1;Name=PMC18489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470892.1;locus_tag=CJ235_08660;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=PMC18489.1;transl_table=11 PNGG01000004.1 Genbank gene 182750 184129 . - . ID=gene-CJ235_08665;Name=CJ235_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08665 PNGG01000004.1 Protein Homology CDS 182750 184129 . - 0 ID=cds-PMC18490.1;Parent=gene-CJ235_08665;Dbxref=NCBI_GP:PMC18490.1;Name=PMC18490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470889.1;locus_tag=CJ235_08665;product=MFS transporter;protein_id=PMC18490.1;transl_table=11 PNGG01000004.1 Genbank gene 184580 186124 . - . ID=gene-CJ235_08670;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CJ235_08670 PNGG01000004.1 Protein Homology CDS 184580 186124 . - 0 ID=cds-PMC18491.1;Parent=gene-CJ235_08670;Dbxref=NCBI_GP:PMC18491.1;Name=PMC18491.1;gbkey=CDS;gene=pruA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020007114.1;locus_tag=CJ235_08670;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=PMC18491.1;transl_table=11 PNGG01000004.1 Genbank gene 186508 186933 . - . ID=gene-CJ235_08675;Name=CJ235_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08675 PNGG01000004.1 Protein Homology CDS 186508 186933 . - 0 ID=cds-PMC18492.1;Parent=gene-CJ235_08675;Dbxref=NCBI_GP:PMC18492.1;Name=PMC18492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470884.1;locus_tag=CJ235_08675;product=DUF4064 domain-containing protein;protein_id=PMC18492.1;transl_table=11 PNGG01000004.1 Genbank gene 187593 189269 . + . ID=gene-CJ235_08680;Name=CJ235_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08680 PNGG01000004.1 Protein Homology CDS 187593 189269 . + 0 ID=cds-PMC18493.1;Parent=gene-CJ235_08680;Dbxref=NCBI_GP:PMC18493.1;Name=PMC18493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506631.1;locus_tag=CJ235_08680;product=BCCT family transporter;protein_id=PMC18493.1;transl_table=11 PNGG01000004.1 Genbank gene 189443 190228 . + . ID=gene-CJ235_08685;Name=CJ235_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08685 PNGG01000004.1 Protein Homology CDS 189443 190228 . + 0 ID=cds-PMC18494.1;Parent=gene-CJ235_08685;Dbxref=NCBI_GP:PMC18494.1;Name=PMC18494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506630.1;locus_tag=CJ235_08685;product=putative hydro-lyase;protein_id=PMC18494.1;transl_table=11 PNGG01000004.1 Genbank gene 190338 190652 . - . ID=gene-CJ235_08690;Name=CJ235_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08690 PNGG01000004.1 Protein Homology CDS 190338 190652 . - 0 ID=cds-PMC18495.1;Parent=gene-CJ235_08690;Dbxref=NCBI_GP:PMC18495.1;Name=PMC18495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497226.1;locus_tag=CJ235_08690;product=DUF4176 domain-containing protein;protein_id=PMC18495.1;transl_table=11 PNGG01000004.1 Genbank gene 190640 191359 . - . ID=gene-CJ235_08695;Name=CJ235_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08695 PNGG01000004.1 Protein Homology CDS 190640 191359 . - 0 ID=cds-PMC18496.1;Parent=gene-CJ235_08695;Dbxref=NCBI_GP:PMC18496.1;Name=PMC18496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01218;locus_tag=CJ235_08695;product=DUF443 domain-containing protein;protein_id=PMC18496.1;transl_table=11 PNGG01000004.1 Genbank gene 191322 192734 . - . ID=gene-CJ235_08700;Name=CJ235_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08700 PNGG01000004.1 Protein Homology CDS 191322 192734 . - 0 ID=cds-PMC18497.1;Parent=gene-CJ235_08700;Dbxref=NCBI_GP:PMC18497.1;Name=PMC18497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04740.10;locus_tag=CJ235_08700;product=transposase;protein_id=PMC18497.1;transl_table=11 PNGG01000004.1 Genbank gene 192739 193092 . - . ID=gene-CJ235_08705;Name=CJ235_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08705 PNGG01000004.1 Protein Homology CDS 192739 193092 . - 0 ID=cds-PMC18498.1;Parent=gene-CJ235_08705;Dbxref=NCBI_GP:PMC18498.1;Name=PMC18498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471423.1;locus_tag=CJ235_08705;product=hypothetical protein;protein_id=PMC18498.1;transl_table=11 PNGG01000004.1 Genbank gene 193105 193380 . - . ID=gene-CJ235_08710;Name=CJ235_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08710 PNGG01000004.1 Protein Homology CDS 193105 193380 . - 0 ID=cds-PMC18499.1;Parent=gene-CJ235_08710;Dbxref=NCBI_GP:PMC18499.1;Name=PMC18499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477798.1;locus_tag=CJ235_08710;product=TIGR04197 family type VII secretion effector;protein_id=PMC18499.1;transl_table=11 PNGG01000004.1 Genbank gene 193588 194214 . - . ID=gene-CJ235_08715;Name=CJ235_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08715 PNGG01000004.1 Protein Homology CDS 193588 194214 . - 0 ID=cds-PMC18500.1;Parent=gene-CJ235_08715;Dbxref=NCBI_GP:PMC18500.1;Name=PMC18500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471245.1;locus_tag=CJ235_08715;product=DUF443 domain-containing protein;protein_id=PMC18500.1;transl_table=11 PNGG01000004.1 Genbank gene 194609 195187 . - . ID=gene-CJ235_08720;Name=CJ235_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08720 PNGG01000004.1 Protein Homology CDS 194609 195187 . - 0 ID=cds-PMC18501.1;Parent=gene-CJ235_08720;Dbxref=NCBI_GP:PMC18501.1;Name=PMC18501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471399.1;locus_tag=CJ235_08720;product=sugar O-acetyltransferase;protein_id=PMC18501.1;transl_table=11 PNGG01000004.1 Genbank gene 195419 195625 . + . ID=gene-CJ235_08725;Name=CJ235_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08725 PNGG01000004.1 Protein Homology CDS 195419 195625 . + 0 ID=cds-PMC18502.1;Parent=gene-CJ235_08725;Dbxref=NCBI_GP:PMC18502.1;Name=PMC18502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471414.1;locus_tag=CJ235_08725;product=hypothetical protein;protein_id=PMC18502.1;transl_table=11 PNGG01000004.1 Genbank gene 195780 196649 . - . ID=gene-CJ235_08730;Name=CJ235_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08730 PNGG01000004.1 Protein Homology CDS 195780 196649 . - 0 ID=cds-PMC18503.1;Parent=gene-CJ235_08730;Dbxref=NCBI_GP:PMC18503.1;Name=PMC18503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765672.1;locus_tag=CJ235_08730;product=NAD(P)-dependent oxidoreductase;protein_id=PMC18503.1;transl_table=11 PNGG01000004.1 Genbank gene 196924 199317 . + . ID=gene-CJ235_08735;Name=CJ235_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08735 PNGG01000004.1 Protein Homology CDS 196924 199317 . + 0 ID=cds-PMC18504.1;Parent=gene-CJ235_08735;Dbxref=NCBI_GP:PMC18504.1;Name=PMC18504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471408.1;locus_tag=CJ235_08735;product=copper-translocating P-type ATPase;protein_id=PMC18504.1;transl_table=11 PNGG01000004.1 Genbank gene 199352 199561 . + . ID=gene-CJ235_08740;Name=CJ235_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08740 PNGG01000004.1 Protein Homology CDS 199352 199561 . + 0 ID=cds-PMC18505.1;Parent=gene-CJ235_08740;Dbxref=NCBI_GP:PMC18505.1;Name=PMC18505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471424.1;locus_tag=CJ235_08740;product=copper chaperone;protein_id=PMC18505.1;transl_table=11 PNGG01000004.1 Genbank gene 199616 200614 . - . ID=gene-CJ235_08745;Name=CJ235_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08745 PNGG01000004.1 Protein Homology CDS 199616 200614 . - 0 ID=cds-PMC18506.1;Parent=gene-CJ235_08745;Dbxref=NCBI_GP:PMC18506.1;Name=PMC18506.1;Note=catalyzes the formation of pyruvate from lactate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506618.1;locus_tag=CJ235_08745;product=lactate dehydrogenase;protein_id=PMC18506.1;transl_table=11 PNGG01000004.1 Genbank gene 200636 201796 . - . ID=gene-CJ235_08750;Name=CJ235_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08750 PNGG01000004.1 Protein Homology CDS 200636 201796 . - 0 ID=cds-PMC18507.1;Parent=gene-CJ235_08750;Dbxref=NCBI_GP:PMC18507.1;Name=PMC18507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274817.1;locus_tag=CJ235_08750;product=N-succinyldiaminopimelate aminotransferase;protein_id=PMC18507.1;transl_table=11 PNGG01000004.1 Genbank gene 202092 202844 . - . ID=gene-CJ235_08755;Name=CJ235_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08755 PNGG01000004.1 Protein Homology CDS 202092 202844 . - 0 ID=cds-PMC18508.1;Parent=gene-CJ235_08755;Dbxref=NCBI_GP:PMC18508.1;Name=PMC18508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454051.1;locus_tag=CJ235_08755;product=transglycosylase;protein_id=PMC18508.1;transl_table=11 PNGG01000004.1 Genbank gene 203314 204357 . - . ID=gene-CJ235_08760;Name=CJ235_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08760 PNGG01000004.1 Protein Homology CDS 203314 204357 . - 0 ID=cds-PMC18509.1;Parent=gene-CJ235_08760;Dbxref=NCBI_GP:PMC18509.1;Name=PMC18509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471407.1;locus_tag=CJ235_08760;product=PTS transporter subunit IIC;protein_id=PMC18509.1;transl_table=11 PNGG01000004.1 Genbank gene 204714 206306 . + . ID=gene-CJ235_08765;Name=CJ235_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08765 PNGG01000004.1 Protein Homology CDS 204714 206306 . + 0 ID=cds-PMC18510.1;Parent=gene-CJ235_08765;Dbxref=NCBI_GP:PMC18510.1;Name=PMC18510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=CJ235_08765;product=solute:sodium symporter family transporter;protein_id=PMC18510.1;transl_table=11 PNGG01000004.1 Genbank gene 206454 206858 . + . ID=gene-CJ235_08770;Name=CJ235_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08770 PNGG01000004.1 Protein Homology CDS 206454 206858 . + 0 ID=cds-PMC18511.1;Parent=gene-CJ235_08770;Dbxref=NCBI_GP:PMC18511.1;Name=PMC18511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13630.4;locus_tag=CJ235_08770;product=hypothetical protein;protein_id=PMC18511.1;transl_table=11 PNGG01000004.1 Genbank gene 206872 207414 . - . ID=gene-CJ235_08775;Name=CJ235_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08775 PNGG01000004.1 Protein Homology CDS 206872 207414 . - 0 ID=cds-PMC18512.1;Parent=gene-CJ235_08775;Dbxref=NCBI_GP:PMC18512.1;Name=PMC18512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471418.1;locus_tag=CJ235_08775;product=M23 family peptidase;protein_id=PMC18512.1;transl_table=11 PNGG01000004.1 Genbank gene 207437 208252 . - . ID=gene-CJ235_08780;Name=CJ235_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08780 PNGG01000004.1 Protein Homology CDS 207437 208252 . - 0 ID=cds-PMC18513.1;Parent=gene-CJ235_08780;Dbxref=NCBI_GP:PMC18513.1;Name=PMC18513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460523.1;locus_tag=CJ235_08780;product=NmrA family protein;protein_id=PMC18513.1;transl_table=11 PNGG01000004.1 Genbank gene 208587 209288 . + . ID=gene-CJ235_08785;Name=CJ235_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08785 PNGG01000004.1 Protein Homology CDS 208587 209288 . + 0 ID=cds-PMC18514.1;Parent=gene-CJ235_08785;Dbxref=NCBI_GP:PMC18514.1;Name=PMC18514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471400.1;locus_tag=CJ235_08785;product=KR domain-containing protein;protein_id=PMC18514.1;transl_table=11 PNGG01000004.1 Genbank gene 209491 210504 . + . ID=gene-CJ235_08790;Name=CJ235_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08790 PNGG01000004.1 Protein Homology CDS 209491 210504 . + 0 ID=cds-PMC18515.1;Parent=gene-CJ235_08790;Dbxref=NCBI_GP:PMC18515.1;Name=PMC18515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471401.1;locus_tag=CJ235_08790;product=amidohydrolase;protein_id=PMC18515.1;transl_table=11 PNGG01000004.1 Genbank gene 210526 211365 . + . ID=gene-CJ235_08795;Name=CJ235_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08795 PNGG01000004.1 Protein Homology CDS 210526 211365 . + 0 ID=cds-PMC18516.1;Parent=gene-CJ235_08795;Dbxref=NCBI_GP:PMC18516.1;Name=PMC18516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467242.1;locus_tag=CJ235_08795;product=alpha/beta hydrolase;protein_id=PMC18516.1;transl_table=11 PNGG01000004.1 Genbank gene 211366 211995 . + . ID=gene-CJ235_08800;Name=CJ235_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08800 PNGG01000004.1 Protein Homology CDS 211366 211995 . + 0 ID=cds-PMC18517.1;Parent=gene-CJ235_08800;Dbxref=NCBI_GP:PMC18517.1;Name=PMC18517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471406.1;locus_tag=CJ235_08800;product=bile acid 7-alpha dehydratase;protein_id=PMC18517.1;transl_table=11 PNGG01000004.1 Genbank gene 212177 212464 . + . ID=gene-CJ235_08805;Name=CJ235_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08805 PNGG01000004.1 Protein Homology CDS 212177 212464 . + 0 ID=cds-PMC18518.1;Parent=gene-CJ235_08805;Dbxref=NCBI_GP:PMC18518.1;Name=PMC18518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471411.1;locus_tag=CJ235_08805;product=general stress protein;protein_id=PMC18518.1;transl_table=11 PNGG01000004.1 Genbank gene 212857 214146 . - . ID=gene-CJ235_08810;Name=CJ235_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08810 PNGG01000004.1 Protein Homology CDS 212857 214146 . - 0 ID=cds-PMC18519.1;Parent=gene-CJ235_08810;Dbxref=NCBI_GP:PMC18519.1;Name=PMC18519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=CJ235_08810;product=hypothetical protein;protein_id=PMC18519.1;transl_table=11 PNGG01000004.1 Genbank gene 214410 215267 . - . ID=gene-CJ235_08815;Name=CJ235_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08815 PNGG01000004.1 Protein Homology CDS 214410 215267 . - 0 ID=cds-PMC18520.1;Parent=gene-CJ235_08815;Dbxref=NCBI_GP:PMC18520.1;Name=PMC18520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471416.1;locus_tag=CJ235_08815;product=fructosamine kinase;protein_id=PMC18520.1;transl_table=11 PNGG01000004.1 Genbank gene 215612 216676 . + . ID=gene-CJ235_08820;Name=CJ235_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08820 PNGG01000004.1 Protein Homology CDS 215612 216676 . + 0 ID=cds-PMC18521.1;Parent=gene-CJ235_08820;Dbxref=NCBI_GP:PMC18521.1;Name=PMC18521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471413.1;locus_tag=CJ235_08820;product=dihydroorotate dehydrogenase (quinone);protein_id=PMC18521.1;transl_table=11 PNGG01000004.1 Genbank gene 217022 217276 . + . ID=gene-CJ235_08825;Name=CJ235_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08825 PNGG01000004.1 GeneMarkS+ CDS 217022 217276 . + 0 ID=cds-PMC18522.1;Parent=gene-CJ235_08825;Dbxref=NCBI_GP:PMC18522.1;Name=PMC18522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08825;product=hypothetical protein;protein_id=PMC18522.1;transl_table=11 PNGG01000004.1 Genbank gene 217269 217691 . + . ID=gene-CJ235_08830;Name=CJ235_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08830 PNGG01000004.1 Protein Homology CDS 217269 217691 . + 0 ID=cds-PMC18523.1;Parent=gene-CJ235_08830;Dbxref=NCBI_GP:PMC18523.1;Name=PMC18523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506603.1;locus_tag=CJ235_08830;product=universal stress protein;protein_id=PMC18523.1;transl_table=11 PNGG01000004.1 Genbank gene 217755 218561 . - . ID=gene-CJ235_08835;Name=CJ235_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08835 PNGG01000004.1 Protein Homology CDS 217755 218561 . - 0 ID=cds-PMC18524.1;Parent=gene-CJ235_08835;Dbxref=NCBI_GP:PMC18524.1;Name=PMC18524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723811.1;locus_tag=CJ235_08835;product=HAD family hydrolase;protein_id=PMC18524.1;transl_table=11 PNGG01000004.1 Genbank gene 219471 220187 . - . ID=gene-CJ235_08840;Name=CJ235_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08840 PNGG01000004.1 Protein Homology CDS 219471 220187 . - 0 ID=cds-PMC18525.1;Parent=gene-CJ235_08840;Dbxref=NCBI_GP:PMC18525.1;Name=PMC18525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765690.1;locus_tag=CJ235_08840;product=DNA integration/recombination/inversion protein;protein_id=PMC18525.1;transl_table=11 PNGG01000004.1 Genbank gene 220485 221915 . + . ID=gene-CJ235_08845;Name=CJ235_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08845 PNGG01000004.1 Protein Homology CDS 220485 221915 . + 0 ID=cds-PMC18526.1;Parent=gene-CJ235_08845;Dbxref=NCBI_GP:PMC18526.1;Name=PMC18526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471591.1;locus_tag=CJ235_08845;product=amino acid permease;protein_id=PMC18526.1;transl_table=11 PNGG01000004.1 Genbank gene 222374 222688 . + . ID=gene-CJ235_08850;Name=CJ235_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08850 PNGG01000004.1 GeneMarkS+ CDS 222374 222688 . + 0 ID=cds-PMC18527.1;Parent=gene-CJ235_08850;Dbxref=NCBI_GP:PMC18527.1;Name=PMC18527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08850;product=hypothetical protein;protein_id=PMC18527.1;transl_table=11 PNGG01000004.1 Genbank gene 222824 223729 . - . ID=gene-CJ235_08855;Name=CJ235_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08855 PNGG01000004.1 Protein Homology CDS 222824 223729 . - 0 ID=cds-PMC18528.1;Parent=gene-CJ235_08855;Dbxref=NCBI_GP:PMC18528.1;Name=PMC18528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471595.1;locus_tag=CJ235_08855;product=ferrichrome ABC transporter substrate-binding protein;protein_id=PMC18528.1;transl_table=11 PNGG01000004.1 Genbank gene 223847 224542 . - . ID=gene-CJ235_08860;Name=CJ235_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08860 PNGG01000004.1 Protein Homology CDS 223847 224542 . - 0 ID=cds-PMC18529.1;Parent=gene-CJ235_08860;Dbxref=NCBI_GP:PMC18529.1;Name=PMC18529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471590.1;locus_tag=CJ235_08860;product=peptide ABC transporter ATP-binding protein;protein_id=PMC18529.1;transl_table=11 PNGG01000004.1 Genbank gene 224542 225315 . - . ID=gene-CJ235_08865;Name=CJ235_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08865 PNGG01000004.1 Protein Homology CDS 224542 225315 . - 0 ID=cds-PMC18530.1;Parent=gene-CJ235_08865;Dbxref=NCBI_GP:PMC18530.1;Name=PMC18530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=CJ235_08865;product=ABC transporter ATP-binding protein;protein_id=PMC18530.1;transl_table=11 PNGG01000004.1 Genbank gene 225308 226132 . - . ID=gene-CJ235_08870;Name=CJ235_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08870 PNGG01000004.1 Protein Homology CDS 225308 226132 . - 0 ID=cds-PMC18531.1;Parent=gene-CJ235_08870;Dbxref=NCBI_GP:PMC18531.1;Name=PMC18531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471594.1;locus_tag=CJ235_08870;product=ABC transporter permease;protein_id=PMC18531.1;transl_table=11 PNGG01000004.1 Genbank gene 226129 227115 . - . ID=gene-CJ235_08875;Name=CJ235_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08875 PNGG01000004.1 Protein Homology CDS 226129 227115 . - 0 ID=cds-PMC18532.1;Parent=gene-CJ235_08875;Dbxref=NCBI_GP:PMC18532.1;Name=PMC18532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471588.1;locus_tag=CJ235_08875;product=ABC transporter permease;protein_id=PMC18532.1;transl_table=11 PNGG01000004.1 Genbank gene 227112 228590 . - . ID=gene-CJ235_08880;Name=CJ235_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08880 PNGG01000004.1 Protein Homology CDS 227112 228590 . - 0 ID=cds-PMC18533.1;Parent=gene-CJ235_08880;Dbxref=NCBI_GP:PMC18533.1;Name=PMC18533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471589.1;locus_tag=CJ235_08880;product=nickel ABC transporter substrate-binding protein;protein_id=PMC18533.1;transl_table=11 PNGG01000004.1 Genbank gene 228775 229677 . - . ID=gene-CJ235_08885;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CJ235_08885 PNGG01000004.1 Protein Homology CDS 228775 229677 . - 0 ID=cds-PMC18534.1;Parent=gene-CJ235_08885;Dbxref=NCBI_GP:PMC18534.1;Name=PMC18534.1;gbkey=CDS;gene=yut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471597.1;locus_tag=CJ235_08885;product=urea transporter;protein_id=PMC18534.1;transl_table=11 PNGG01000004.1 Genbank gene 229894 230196 . + . ID=gene-CJ235_08890;Name=CJ235_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08890 PNGG01000004.1 Protein Homology CDS 229894 230196 . + 0 ID=cds-PMC18535.1;Parent=gene-CJ235_08890;Dbxref=NCBI_GP:PMC18535.1;Name=PMC18535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723823.1;locus_tag=CJ235_08890;product=urease subunit gamma;protein_id=PMC18535.1;transl_table=11 PNGG01000004.1 Genbank gene 230209 230628 . + . ID=gene-CJ235_08895;Name=CJ235_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08895 PNGG01000004.1 Protein Homology CDS 230209 230628 . + 0 ID=cds-PMC18536.1;Parent=gene-CJ235_08895;Dbxref=NCBI_GP:PMC18536.1;Name=PMC18536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723824.1;locus_tag=CJ235_08895;product=urease subunit beta;protein_id=PMC18536.1;transl_table=11 PNGG01000004.1 Genbank gene 230625 232340 . + . ID=gene-CJ235_08900;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CJ235_08900 PNGG01000004.1 Protein Homology CDS 230625 232340 . + 0 ID=cds-PMC18537.1;Parent=gene-CJ235_08900;Dbxref=NCBI_GP:PMC18537.1;Name=PMC18537.1;gbkey=CDS;gene=ureC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CJ235_08900;product=urease subunit alpha;protein_id=PMC18537.1;transl_table=11 PNGG01000004.1 Genbank gene 232362 232814 . + . ID=gene-CJ235_08905;Name=CJ235_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08905 PNGG01000004.1 Protein Homology CDS 232362 232814 . + 0 ID=cds-PMC18538.1;Parent=gene-CJ235_08905;Dbxref=NCBI_GP:PMC18538.1;Name=PMC18538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364779.1;locus_tag=CJ235_08905;product=urease accessory protein UreE;protein_id=PMC18538.1;transl_table=11 PNGG01000004.1 Genbank gene 232807 233496 . + . ID=gene-CJ235_08910;Name=CJ235_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08910 PNGG01000004.1 Protein Homology CDS 232807 233496 . + 0 ID=cds-PMC18539.1;Parent=gene-CJ235_08910;Dbxref=NCBI_GP:PMC18539.1;Name=PMC18539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501024.1;locus_tag=CJ235_08910;product=urease accessory protein UreF;protein_id=PMC18539.1;transl_table=11 PNGG01000004.1 Genbank gene 233530 234144 . + . ID=gene-CJ235_08915;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CJ235_08915 PNGG01000004.1 Protein Homology CDS 233530 234144 . + 0 ID=cds-PMC18540.1;Parent=gene-CJ235_08915;Dbxref=NCBI_GP:PMC18540.1;Name=PMC18540.1;gbkey=CDS;gene=ureG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471585.1;locus_tag=CJ235_08915;product=urease accessory protein UreG;protein_id=PMC18540.1;transl_table=11 PNGG01000004.1 Genbank gene 234144 234986 . + . ID=gene-CJ235_08920;Name=CJ235_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08920 PNGG01000004.1 Protein Homology CDS 234144 234986 . + 0 ID=cds-PMC18541.1;Parent=gene-CJ235_08920;Dbxref=NCBI_GP:PMC18541.1;Name=PMC18541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506586.1;locus_tag=CJ235_08920;product=urease accessory protein;protein_id=PMC18541.1;transl_table=11 PNGG01000004.1 Genbank gene 235513 236607 . - . ID=gene-CJ235_08925;Name=CJ235_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08925 PNGG01000004.1 Protein Homology CDS 235513 236607 . - 0 ID=cds-PMC18542.1;Parent=gene-CJ235_08925;Dbxref=NCBI_GP:PMC18542.1;Name=PMC18542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471730.1;locus_tag=CJ235_08925;product=hypothetical protein;protein_id=PMC18542.1;transl_table=11 PNGG01000004.1 Genbank gene 236965 237435 . + . ID=gene-CJ235_08930;Name=CJ235_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08930 PNGG01000004.1 Protein Homology CDS 236965 237435 . + 0 ID=cds-PMC18543.1;Parent=gene-CJ235_08930;Dbxref=NCBI_GP:PMC18543.1;Name=PMC18543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511565.1;locus_tag=CJ235_08930;product=thioesterase;protein_id=PMC18543.1;transl_table=11 PNGG01000004.1 Genbank gene 237558 238067 . - . ID=gene-CJ235_08935;Name=CJ235_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08935 PNGG01000004.1 Protein Homology CDS 237558 238067 . - 0 ID=cds-PMC18544.1;Parent=gene-CJ235_08935;Dbxref=NCBI_GP:PMC18544.1;Name=PMC18544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11683.6;locus_tag=CJ235_08935;product=DUF3278 domain-containing protein;protein_id=PMC18544.1;transl_table=11 PNGG01000004.1 Genbank gene 238054 238254 . - . ID=gene-CJ235_08940;Name=CJ235_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08940 PNGG01000004.1 Protein Homology CDS 238054 238254 . - 0 ID=cds-PMC18545.1;Parent=gene-CJ235_08940;Dbxref=NCBI_GP:PMC18545.1;Name=PMC18545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_039247.1;locus_tag=CJ235_08940;product=transcriptional regulator;protein_id=PMC18545.1;transl_table=11 PNGG01000004.1 Genbank gene 238447 239736 . + . ID=gene-CJ235_08945;Name=CJ235_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08945 PNGG01000004.1 Protein Homology CDS 238447 239736 . + 0 ID=cds-PMC18546.1;Parent=gene-CJ235_08945;Dbxref=NCBI_GP:PMC18546.1;Name=PMC18546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471735.1;locus_tag=CJ235_08945;product=arsenic transporter;protein_id=PMC18546.1;transl_table=11 PNGG01000004.1 Genbank gene 239892 240152 . + . ID=gene-CJ235_08950;Name=CJ235_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08950 PNGG01000004.1 GeneMarkS+ CDS 239892 240152 . + 0 ID=cds-PMC18547.1;Parent=gene-CJ235_08950;Dbxref=NCBI_GP:PMC18547.1;Name=PMC18547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08950;product=hypothetical protein;protein_id=PMC18547.1;transl_table=11 PNGG01000004.1 Genbank gene 240296 241450 . + . ID=gene-CJ235_08955;Name=CJ235_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08955 PNGG01000004.1 Protein Homology CDS 240296 241450 . + 0 ID=cds-PMC18548.1;Parent=gene-CJ235_08955;Dbxref=NCBI_GP:PMC18548.1;Name=PMC18548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13304.4;locus_tag=CJ235_08955;product=ATP-binding protein;protein_id=PMC18548.1;transl_table=11 PNGG01000004.1 Genbank gene 241447 241986 . + . ID=gene-CJ235_08960;Name=CJ235_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08960 PNGG01000004.1 GeneMarkS+ CDS 241447 241986 . + 0 ID=cds-PMC18549.1;Parent=gene-CJ235_08960;Dbxref=NCBI_GP:PMC18549.1;Name=PMC18549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_08960;product=hypothetical protein;protein_id=PMC18549.1;transl_table=11 PNGG01000004.1 Genbank gene 242128 243489 . + . ID=gene-CJ235_08965;Name=CJ235_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08965 PNGG01000004.1 Protein Homology CDS 242128 243489 . + 0 ID=cds-PMC18550.1;Parent=gene-CJ235_08965;Dbxref=NCBI_GP:PMC18550.1;Name=PMC18550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471731.1;locus_tag=CJ235_08965;product=CoA-disulfide reductase;protein_id=PMC18550.1;transl_table=11 PNGG01000004.1 Genbank gene 243766 244836 . + . ID=gene-CJ235_08970;Name=CJ235_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08970 PNGG01000004.1 Protein Homology CDS 243766 244836 . + 0 ID=cds-PMC18551.1;Parent=gene-CJ235_08970;Dbxref=NCBI_GP:PMC18551.1;Name=PMC18551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13248.4;locus_tag=CJ235_08970;product=zinc-ribbon domain-containing protein;protein_id=PMC18551.1;transl_table=11 PNGG01000004.1 Genbank gene 244853 246232 . + . ID=gene-CJ235_08975;Name=CJ235_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08975 PNGG01000004.1 Protein Homology CDS 244853 246232 . + 0 ID=cds-PMC18552.1;Parent=gene-CJ235_08975;Dbxref=NCBI_GP:PMC18552.1;Name=PMC18552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506557.1;locus_tag=CJ235_08975;product=zinc ribbon domain-containing protein;protein_id=PMC18552.1;transl_table=11 PNGG01000004.1 Genbank gene 246341 247084 . - . ID=gene-CJ235_08980;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CJ235_08980 PNGG01000004.1 Protein Homology CDS 246341 247084 . - 0 ID=cds-PMC18553.1;Parent=gene-CJ235_08980;Dbxref=NCBI_GP:PMC18553.1;Name=PMC18553.1;gbkey=CDS;gene=nagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471723.1;locus_tag=CJ235_08980;product=glucosamine-6-phosphate deaminase;protein_id=PMC18553.1;transl_table=11 PNGG01000004.1 Genbank gene 247928 249160 . + . ID=gene-CJ235_08985;Name=CJ235_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08985 PNGG01000004.1 Protein Homology CDS 247928 249160 . + 0 ID=cds-PMC18554.1;Parent=gene-CJ235_08985;Dbxref=NCBI_GP:PMC18554.1;Name=PMC18554.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471733.1;locus_tag=CJ235_08985;product=succinyl-diaminopimelate desuccinylase;protein_id=PMC18554.1;transl_table=11 PNGG01000004.1 Genbank gene 249450 251117 . - . ID=gene-CJ235_08990;Name=CJ235_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08990 PNGG01000004.1 Protein Homology CDS 249450 251117 . - 0 ID=cds-PMC18555.1;Parent=gene-CJ235_08990;Dbxref=NCBI_GP:PMC18555.1;Name=PMC18555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471438.1;locus_tag=CJ235_08990;product=APC family permease;protein_id=PMC18555.1;transl_table=11 PNGG01000004.1 Genbank gene 251638 252759 . - . ID=gene-CJ235_08995;Name=CJ235_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_08995 PNGG01000004.1 Protein Homology CDS 251638 252759 . - 0 ID=cds-PMC18556.1;Parent=gene-CJ235_08995;Dbxref=NCBI_GP:PMC18556.1;Name=PMC18556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274701.1;locus_tag=CJ235_08995;product=capsule biosynthesis protein CapA;protein_id=PMC18556.1;transl_table=11 PNGG01000004.1 Genbank gene 252937 253620 . + . ID=gene-CJ235_09000;Name=CJ235_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09000 PNGG01000004.1 Protein Homology CDS 252937 253620 . + 0 ID=cds-PMC18557.1;Parent=gene-CJ235_09000;Dbxref=NCBI_GP:PMC18557.1;Name=PMC18557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471431.1;locus_tag=CJ235_09000;product=alpha/beta hydrolase;protein_id=PMC18557.1;transl_table=11 PNGG01000004.1 Genbank gene 253657 254601 . + . ID=gene-CJ235_09005;Name=CJ235_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09005 PNGG01000004.1 Protein Homology CDS 253657 254601 . + 0 ID=cds-PMC18558.1;Parent=gene-CJ235_09005;Dbxref=NCBI_GP:PMC18558.1;Name=PMC18558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471439.1;locus_tag=CJ235_09005;product=purine nucleosidase;protein_id=PMC18558.1;transl_table=11 PNGG01000004.1 Genbank gene 254851 256155 . - . ID=gene-CJ235_09010;Name=CJ235_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09010 PNGG01000004.1 Protein Homology CDS 254851 256155 . - 0 ID=cds-PMC18559.1;Parent=gene-CJ235_09010;Dbxref=NCBI_GP:PMC18559.1;Name=PMC18559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471434.1;locus_tag=CJ235_09010;product=MFS transporter;protein_id=PMC18559.1;transl_table=11 PNGG01000004.1 Genbank gene 256393 258090 . - . ID=gene-CJ235_09015;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CJ235_09015 PNGG01000004.1 Protein Homology CDS 256393 258090 . - 0 ID=cds-PMC18560.1;Parent=gene-CJ235_09015;Dbxref=NCBI_GP:PMC18560.1;Name=PMC18560.1;gbkey=CDS;gene=betA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471433.1;locus_tag=CJ235_09015;product=choline dehydrogenase;protein_id=PMC18560.1;transl_table=11 PNGG01000004.1 Genbank gene 258257 259750 . - . ID=gene-CJ235_09020;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CJ235_09020 PNGG01000004.1 Protein Homology CDS 258257 259750 . - 0 ID=cds-PMC18561.1;Parent=gene-CJ235_09020;Dbxref=NCBI_GP:PMC18561.1;Name=PMC18561.1;gbkey=CDS;gene=betB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765721.1;locus_tag=CJ235_09020;product=betaine-aldehyde dehydrogenase;protein_id=PMC18561.1;transl_table=11 PNGG01000004.1 Genbank gene 260253 261887 . - . ID=gene-CJ235_09025;Name=CJ235_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09025 PNGG01000004.1 Protein Homology CDS 260253 261887 . - 0 ID=cds-PMC18562.1;Parent=gene-CJ235_09025;Dbxref=NCBI_GP:PMC18562.1;Name=PMC18562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471436.1;locus_tag=CJ235_09025;product=BCCT family transporter;protein_id=PMC18562.1;transl_table=11 ##sequence-region PNGG01000005.1 1 148328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000005.1 Genbank region 1 148328 . + . ID=PNGG01000005.1:1..148328;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000005.1 Genbank gene 790 1245 . - . ID=gene-CJ235_09030;Name=CJ235_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09030 PNGG01000005.1 Protein Homology CDS 790 1245 . - 0 ID=cds-PMC17963.1;Parent=gene-CJ235_09030;Dbxref=NCBI_GP:PMC17963.1;Name=PMC17963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472182.1;locus_tag=CJ235_09030;product=transcriptional regulator SlyA;protein_id=PMC17963.1;transl_table=11 PNGG01000005.1 Genbank gene 1664 2635 . + . ID=gene-CJ235_09035;Name=CJ235_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09035 PNGG01000005.1 Protein Homology CDS 1664 2635 . + 0 ID=cds-PMC17964.1;Parent=gene-CJ235_09035;Dbxref=NCBI_GP:PMC17964.1;Name=PMC17964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472179.1;locus_tag=CJ235_09035;product=YdcF family protein;protein_id=PMC17964.1;transl_table=11 PNGG01000005.1 Genbank gene 2830 3831 . + . ID=gene-CJ235_09040;Name=CJ235_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09040 PNGG01000005.1 Protein Homology CDS 2830 3831 . + 0 ID=cds-PMC17965.1;Parent=gene-CJ235_09040;Dbxref=NCBI_GP:PMC17965.1;Name=PMC17965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501176.1;locus_tag=CJ235_09040;product=biotin synthase BioB;protein_id=PMC17965.1;transl_table=11 PNGG01000005.1 Genbank gene 4113 4475 . + . ID=gene-CJ235_09045;Name=CJ235_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09045 PNGG01000005.1 Protein Homology CDS 4113 4475 . + 0 ID=cds-PMC17966.1;Parent=gene-CJ235_09045;Dbxref=NCBI_GP:PMC17966.1;Name=PMC17966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364902.1;locus_tag=CJ235_09045;product=hypothetical protein;protein_id=PMC17966.1;transl_table=11 PNGG01000005.1 Genbank gene 4596 7088 . - . ID=gene-CJ235_09050;Name=CJ235_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09050 PNGG01000005.1 Protein Homology CDS 4596 7088 . - 0 ID=cds-PMC17967.1;Parent=gene-CJ235_09050;Dbxref=NCBI_GP:PMC17967.1;Name=PMC17967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382941.1;locus_tag=CJ235_09050;product=MMPL family transporter;protein_id=PMC17967.1;transl_table=11 PNGG01000005.1 Genbank gene 7462 8826 . + . ID=gene-CJ235_09055;Name=CJ235_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09055 PNGG01000005.1 Protein Homology CDS 7462 8826 . + 0 ID=cds-PMC17968.1;Parent=gene-CJ235_09055;Dbxref=NCBI_GP:PMC17968.1;Name=PMC17968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506850.1;locus_tag=CJ235_09055;product=hypothetical protein;protein_id=PMC17968.1;transl_table=11 PNGG01000005.1 Genbank gene 8967 10166 . + . ID=gene-CJ235_09060;Name=CJ235_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09060 PNGG01000005.1 Protein Homology CDS 8967 10166 . + 0 ID=cds-PMC17969.1;Parent=gene-CJ235_09060;Dbxref=NCBI_GP:PMC17969.1;Name=PMC17969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472183.1;locus_tag=CJ235_09060;product=MFS transporter;protein_id=PMC17969.1;transl_table=11 PNGG01000005.1 Genbank gene 10313 11245 . + . ID=gene-CJ235_09065;Name=CJ235_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09065 PNGG01000005.1 Protein Homology CDS 10313 11245 . + 0 ID=cds-PMC17970.1;Parent=gene-CJ235_09065;Dbxref=NCBI_GP:PMC17970.1;Name=PMC17970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471954.1;locus_tag=CJ235_09065;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=PMC17970.1;transl_table=11 PNGG01000005.1 Genbank gene 11792 12343 . - . ID=gene-CJ235_09070;Name=CJ235_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09070 PNGG01000005.1 Protein Homology CDS 11792 12343 . - 0 ID=cds-PMC17971.1;Parent=gene-CJ235_09070;Dbxref=NCBI_GP:PMC17971.1;Name=PMC17971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506852.1;locus_tag=CJ235_09070;product=TetR/AcrR family transcriptional regulator;protein_id=PMC17971.1;transl_table=11 PNGG01000005.1 Genbank gene 12471 13118 . + . ID=gene-CJ235_09075;Name=CJ235_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09075 PNGG01000005.1 Protein Homology CDS 12471 13118 . + 0 ID=cds-PMC17972.1;Parent=gene-CJ235_09075;Dbxref=NCBI_GP:PMC17972.1;Name=PMC17972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468871.1;locus_tag=CJ235_09075;product=HlyD family secretion protein;protein_id=PMC17972.1;transl_table=11 PNGG01000005.1 Genbank gene 13131 15068 . + . ID=gene-CJ235_09080;Name=CJ235_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09080 PNGG01000005.1 Protein Homology CDS 13131 15068 . + 0 ID=cds-PMC17973.1;Parent=gene-CJ235_09080;Dbxref=NCBI_GP:PMC17973.1;Name=PMC17973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511477.1;locus_tag=CJ235_09080;product=MFS transporter;protein_id=PMC17973.1;transl_table=11 PNGG01000005.1 Genbank gene 15152 15787 . - . ID=gene-CJ235_09085;Name=CJ235_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09085 PNGG01000005.1 Protein Homology CDS 15152 15787 . - 0 ID=cds-PMC17974.1;Parent=gene-CJ235_09085;Dbxref=NCBI_GP:PMC17974.1;Name=PMC17974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471997.1;locus_tag=CJ235_09085;product=hypothetical protein;protein_id=PMC17974.1;transl_table=11 PNGG01000005.1 Genbank gene 15921 16313 . - . ID=gene-CJ235_09090;Name=CJ235_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09090 PNGG01000005.1 GeneMarkS+ CDS 15921 16313 . - 0 ID=cds-PMC17975.1;Parent=gene-CJ235_09090;Dbxref=NCBI_GP:PMC17975.1;Name=PMC17975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09090;product=hypothetical protein;protein_id=PMC17975.1;transl_table=11 PNGG01000005.1 Genbank gene 16324 16794 . - . ID=gene-CJ235_09095;Name=CJ235_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09095 PNGG01000005.1 Protein Homology CDS 16324 16794 . - 0 ID=cds-PMC17976.1;Parent=gene-CJ235_09095;Dbxref=NCBI_GP:PMC17976.1;Name=PMC17976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471998.1;locus_tag=CJ235_09095;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=PMC17976.1;transl_table=11 PNGG01000005.1 Genbank gene 17065 18009 . + . ID=gene-CJ235_09100;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CJ235_09100 PNGG01000005.1 Protein Homology CDS 17065 18009 . + 0 ID=cds-PMC17977.1;Parent=gene-CJ235_09100;Dbxref=NCBI_GP:PMC17977.1;Name=PMC17977.1;gbkey=CDS;gene=corA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478778.1;locus_tag=CJ235_09100;product=magnesium and cobalt transport protein CorA;protein_id=PMC17977.1;transl_table=11 PNGG01000005.1 Genbank gene 18071 19111 . + . ID=gene-CJ235_09105;Name=CJ235_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09105 PNGG01000005.1 Protein Homology CDS 18071 19111 . + 0 ID=cds-PMC17978.1;Parent=gene-CJ235_09105;Dbxref=NCBI_GP:PMC17978.1;Name=PMC17978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471994.1;locus_tag=CJ235_09105;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=PMC17978.1;transl_table=11 PNGG01000005.1 Genbank gene 19211 20419 . - . ID=gene-CJ235_09110;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CJ235_09110 PNGG01000005.1 Protein Homology CDS 19211 20419 . - 0 ID=cds-PMC17979.1;Parent=gene-CJ235_09110;Dbxref=NCBI_GP:PMC17979.1;Name=PMC17979.1;gbkey=CDS;gene=gltS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506861.1;locus_tag=CJ235_09110;product=sodium/glutamate symporter;protein_id=PMC17979.1;transl_table=11 PNGG01000005.1 Genbank gene 20946 21554 . - . ID=gene-CJ235_09115;Name=CJ235_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09115 PNGG01000005.1 Protein Homology CDS 20946 21554 . - 0 ID=cds-PMC17980.1;Parent=gene-CJ235_09115;Dbxref=NCBI_GP:PMC17980.1;Name=PMC17980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471853.1;locus_tag=CJ235_09115;product=DNA-3-methyladenine glycosylase;protein_id=PMC17980.1;transl_table=11 PNGG01000005.1 Genbank gene 21659 22288 . + . ID=gene-CJ235_09120;Name=CJ235_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09120 PNGG01000005.1 Protein Homology CDS 21659 22288 . + 0 ID=cds-PMC17981.1;Parent=gene-CJ235_09120;Dbxref=NCBI_GP:PMC17981.1;Name=PMC17981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05656.12;locus_tag=CJ235_09120;product=DUF805 domain-containing protein;protein_id=PMC17981.1;transl_table=11 PNGG01000005.1 Genbank gene 22321 22911 . + . ID=gene-CJ235_09125;Name=CJ235_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09125 PNGG01000005.1 Protein Homology CDS 22321 22911 . + 0 ID=cds-PMC17982.1;Parent=gene-CJ235_09125;Dbxref=NCBI_GP:PMC17982.1;Name=PMC17982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436817.1;locus_tag=CJ235_09125;product=DUF805 domain-containing protein;protein_id=PMC17982.1;transl_table=11 PNGG01000005.1 Genbank gene 22948 23559 . + . ID=gene-CJ235_09130;Name=CJ235_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09130 PNGG01000005.1 Protein Homology CDS 22948 23559 . + 0 ID=cds-PMC17983.1;Parent=gene-CJ235_09130;Dbxref=NCBI_GP:PMC17983.1;Name=PMC17983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05656.12;locus_tag=CJ235_09130;product=DUF805 domain-containing protein;protein_id=PMC17983.1;transl_table=11 PNGG01000005.1 Genbank gene 23834 24844 . + . ID=gene-CJ235_09135;Name=CJ235_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09135 PNGG01000005.1 Protein Homology CDS 23834 24844 . + 0 ID=cds-PMC17984.1;Parent=gene-CJ235_09135;Dbxref=NCBI_GP:PMC17984.1;Name=PMC17984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174911.1;locus_tag=CJ235_09135;product=galactose mutarotase;protein_id=PMC17984.1;transl_table=11 PNGG01000005.1 Genbank gene 24918 25607 . + . ID=gene-CJ235_09140;Name=CJ235_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09140 PNGG01000005.1 Protein Homology CDS 24918 25607 . + 0 ID=cds-PMC17985.1;Parent=gene-CJ235_09140;Dbxref=NCBI_GP:PMC17985.1;Name=PMC17985.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901074.1;locus_tag=CJ235_09140;product=ribose 5-phosphate isomerase A;protein_id=PMC17985.1;transl_table=11 PNGG01000005.1 Genbank gene 25672 26955 . - . ID=gene-CJ235_09145;Name=CJ235_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09145 PNGG01000005.1 Protein Homology CDS 25672 26955 . - 0 ID=cds-PMC17986.1;Parent=gene-CJ235_09145;Dbxref=NCBI_GP:PMC17986.1;Name=PMC17986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506870.1;locus_tag=CJ235_09145;product=CPBP family intramembrane metalloprotease;protein_id=PMC17986.1;transl_table=11 PNGG01000005.1 Genbank gene 27247 28182 . + . ID=gene-CJ235_09150;Name=CJ235_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09150 PNGG01000005.1 Protein Homology CDS 27247 28182 . + 0 ID=cds-PMC17987.1;Parent=gene-CJ235_09150;Dbxref=NCBI_GP:PMC17987.1;Name=PMC17987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471849.1;locus_tag=CJ235_09150;product=formimidoylglutamase;protein_id=PMC17987.1;transl_table=11 PNGG01000005.1 Genbank gene 28389 29261 . - . ID=gene-CJ235_09155;Name=CJ235_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09155 PNGG01000005.1 Protein Homology CDS 28389 29261 . - 0 ID=cds-PMC17988.1;Parent=gene-CJ235_09155;Dbxref=NCBI_GP:PMC17988.1;Name=PMC17988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471843.1;locus_tag=CJ235_09155;product=LysR family transcriptional regulator;protein_id=PMC17988.1;transl_table=11 PNGG01000005.1 Genbank gene 29566 31227 . + . ID=gene-CJ235_09160;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CJ235_09160 PNGG01000005.1 Protein Homology CDS 29566 31227 . + 0 ID=cds-PMC17989.1;Parent=gene-CJ235_09160;Dbxref=NCBI_GP:PMC17989.1;Name=PMC17989.1;gbkey=CDS;gene=hutU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501068.1;locus_tag=CJ235_09160;product=urocanate hydratase;protein_id=PMC17989.1;transl_table=11 PNGG01000005.1 Genbank gene 31227 32468 . + . ID=gene-CJ235_09165;Name=CJ235_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09165 PNGG01000005.1 Protein Homology CDS 31227 32468 . + 0 ID=cds-PMC17990.1;Parent=gene-CJ235_09165;Dbxref=NCBI_GP:PMC17990.1;Name=PMC17990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471847.1;locus_tag=CJ235_09165;product=imidazolonepropionase;protein_id=PMC17990.1;transl_table=11 PNGG01000005.1 Genbank gene 32672 33793 . + . ID=gene-CJ235_09170;Name=CJ235_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09170 PNGG01000005.1 Protein Homology CDS 32672 33793 . + 0 ID=cds-PMC17991.1;Parent=gene-CJ235_09170;Dbxref=NCBI_GP:PMC17991.1;Name=PMC17991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506877.1;locus_tag=CJ235_09170;product=amidohydrolase;protein_id=PMC17991.1;transl_table=11 PNGG01000005.1 Genbank gene 34114 34995 . + . ID=gene-CJ235_09175;Name=CJ235_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09175 PNGG01000005.1 Protein Homology CDS 34114 34995 . + 0 ID=cds-PMC17992.1;Parent=gene-CJ235_09175;Dbxref=NCBI_GP:PMC17992.1;Name=PMC17992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501065.1;locus_tag=CJ235_09175;product=NAD(P)-dependent dehydrogenase;protein_id=PMC17992.1;transl_table=11 PNGG01000005.1 Genbank gene 35132 35743 . + . ID=gene-CJ235_09180;Name=CJ235_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09180 PNGG01000005.1 Protein Homology CDS 35132 35743 . + 0 ID=cds-PMC18122.1;Parent=gene-CJ235_09180;Dbxref=NCBI_GP:PMC18122.1;Name=PMC18122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471839.1;locus_tag=CJ235_09180;product=flavin reductase family protein;protein_id=PMC18122.1;transl_table=11 PNGG01000005.1 Genbank gene 35892 36455 . + . ID=gene-CJ235_09185;Name=CJ235_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09185 PNGG01000005.1 GeneMarkS+ CDS 35892 36455 . + 0 ID=cds-PMC17993.1;Parent=gene-CJ235_09185;Dbxref=NCBI_GP:PMC17993.1;Name=PMC17993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09185;product=hypothetical protein;protein_id=PMC17993.1;transl_table=11 PNGG01000005.1 Genbank gene 36462 37049 . + . ID=gene-CJ235_09190;Name=CJ235_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09190 PNGG01000005.1 GeneMarkS+ CDS 36462 37049 . + 0 ID=cds-PMC17994.1;Parent=gene-CJ235_09190;Dbxref=NCBI_GP:PMC17994.1;Name=PMC17994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09190;product=hypothetical protein;protein_id=PMC17994.1;transl_table=11 PNGG01000005.1 cmsearch riboswitch 37178 37277 . + . ID=id-PNGG01000005.1:37178..37277;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000005.1 Genbank gene 37352 38647 . + . ID=gene-CJ235_09195;Name=CJ235_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09195 PNGG01000005.1 Protein Homology CDS 37352 38647 . + 0 ID=cds-PMC17995.1;Parent=gene-CJ235_09195;Dbxref=NCBI_GP:PMC17995.1;Name=PMC17995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468902.1;locus_tag=CJ235_09195;product=sodium:proton antiporter;protein_id=PMC17995.1;transl_table=11 PNGG01000005.1 Genbank gene 38864 39373 . + . ID=gene-CJ235_09200;Name=CJ235_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09200 PNGG01000005.1 Protein Homology CDS 38864 39373 . + 0 ID=cds-PMC17996.1;Parent=gene-CJ235_09200;Dbxref=NCBI_GP:PMC17996.1;Name=PMC17996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901062.1;locus_tag=CJ235_09200;product=SRPBCC domain-containing protein;protein_id=PMC17996.1;transl_table=11 PNGG01000005.1 Genbank gene 40035 40562 . - . ID=gene-CJ235_09205;Name=CJ235_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09205 PNGG01000005.1 Protein Homology CDS 40035 40562 . - 0 ID=cds-PMC17997.1;Parent=gene-CJ235_09205;Dbxref=NCBI_GP:PMC17997.1;Name=PMC17997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302531.1;locus_tag=CJ235_09205;product=hypothetical protein;protein_id=PMC17997.1;transl_table=11 PNGG01000005.1 Genbank gene 40878 41819 . + . ID=gene-CJ235_09210;Name=CJ235_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09210 PNGG01000005.1 Protein Homology CDS 40878 41819 . + 0 ID=cds-PMC17998.1;Parent=gene-CJ235_09210;Dbxref=NCBI_GP:PMC17998.1;Name=PMC17998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302532.1;locus_tag=CJ235_09210;product=symporter;protein_id=PMC17998.1;transl_table=11 PNGG01000005.1 Genbank gene 41894 42823 . + . ID=gene-CJ235_09215;Name=CJ235_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09215 PNGG01000005.1 Protein Homology CDS 41894 42823 . + 0 ID=cds-PMC17999.1;Parent=gene-CJ235_09215;Dbxref=NCBI_GP:PMC17999.1;Name=PMC17999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471328.1;locus_tag=CJ235_09215;product=ring-cleaving dioxygenase;protein_id=PMC17999.1;transl_table=11 PNGG01000005.1 Genbank gene 42839 43477 . + . ID=gene-CJ235_09220;Name=CJ235_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09220 PNGG01000005.1 Protein Homology CDS 42839 43477 . + 0 ID=cds-PMC18000.1;Parent=gene-CJ235_09220;Dbxref=NCBI_GP:PMC18000.1;Name=PMC18000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471250.1;locus_tag=CJ235_09220;product=HAD family hydrolase;protein_id=PMC18000.1;transl_table=11 PNGG01000005.1 Genbank gene 43482 43673 . + . ID=gene-CJ235_09225;Name=CJ235_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09225 PNGG01000005.1 Protein Homology CDS 43482 43673 . + 0 ID=cds-PMC18001.1;Parent=gene-CJ235_09225;Dbxref=NCBI_GP:PMC18001.1;Name=PMC18001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506888.1;locus_tag=CJ235_09225;product=hypothetical protein;protein_id=PMC18001.1;transl_table=11 PNGG01000005.1 Genbank gene 43808 43993 . - . ID=gene-CJ235_09230;Name=CJ235_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09230 PNGG01000005.1 GeneMarkS+ CDS 43808 43993 . - 0 ID=cds-PMC18002.1;Parent=gene-CJ235_09230;Dbxref=NCBI_GP:PMC18002.1;Name=PMC18002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09230;product=hypothetical protein;protein_id=PMC18002.1;transl_table=11 PNGG01000005.1 Genbank gene 43993 44349 . - . ID=gene-CJ235_09235;Name=CJ235_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09235 PNGG01000005.1 Protein Homology CDS 43993 44349 . - 0 ID=cds-PMC18003.1;Parent=gene-CJ235_09235;Dbxref=NCBI_GP:PMC18003.1;Name=PMC18003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506890.1;locus_tag=CJ235_09235;product=hypothetical protein;protein_id=PMC18003.1;transl_table=11 PNGG01000005.1 Genbank gene 44950 46338 . + . ID=gene-CJ235_09240;Name=CJ235_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09240 PNGG01000005.1 Protein Homology CDS 44950 46338 . + 0 ID=cds-PMC18004.1;Parent=gene-CJ235_09240;Dbxref=NCBI_GP:PMC18004.1;Name=PMC18004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471347.1;locus_tag=CJ235_09240;product=amino acid permease;protein_id=PMC18004.1;transl_table=11 PNGG01000005.1 Genbank gene 46410 47285 . - . ID=gene-CJ235_09245;Name=CJ235_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09245 PNGG01000005.1 Protein Homology CDS 46410 47285 . - 0 ID=cds-PMC18005.1;Parent=gene-CJ235_09245;Dbxref=NCBI_GP:PMC18005.1;Name=PMC18005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471292.1;locus_tag=CJ235_09245;product=HTH-type transcriptional regulator MurR;protein_id=PMC18005.1;transl_table=11 PNGG01000005.1 Genbank gene 47287 48729 . - . ID=gene-CJ235_09250;Name=CJ235_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09250 PNGG01000005.1 Protein Homology CDS 47287 48729 . - 0 ID=cds-PMC18006.1;Parent=gene-CJ235_09250;Dbxref=NCBI_GP:PMC18006.1;Name=PMC18006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506895.1;locus_tag=CJ235_09250;product=permease;protein_id=PMC18006.1;transl_table=11 PNGG01000005.1 Genbank gene 48776 49660 . - . ID=gene-CJ235_09255;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CJ235_09255 PNGG01000005.1 Protein Homology CDS 48776 49660 . - 0 ID=cds-PMC18007.1;Parent=gene-CJ235_09255;Dbxref=NCBI_GP:PMC18007.1;Name=PMC18007.1;gbkey=CDS;gene=murQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471277.1;locus_tag=CJ235_09255;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=PMC18007.1;transl_table=11 PNGG01000005.1 Genbank gene 49673 50722 . - . ID=gene-CJ235_09260;Name=CJ235_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09260 PNGG01000005.1 Protein Homology CDS 49673 50722 . - 0 ID=cds-PMC18008.1;Parent=gene-CJ235_09260;Dbxref=NCBI_GP:PMC18008.1;Name=PMC18008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471376.1;locus_tag=CJ235_09260;product=DUF871 domain-containing protein;protein_id=PMC18008.1;transl_table=11 PNGG01000005.1 Genbank gene 50849 51184 . - . ID=gene-CJ235_09265;Name=CJ235_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09265 PNGG01000005.1 GeneMarkS+ CDS 50849 51184 . - 0 ID=cds-PMC18009.1;Parent=gene-CJ235_09265;Dbxref=NCBI_GP:PMC18009.1;Name=PMC18009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09265;product=hypothetical protein;protein_id=PMC18009.1;transl_table=11 PNGG01000005.1 Genbank gene 51340 52068 . + . ID=gene-CJ235_09270;Name=CJ235_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09270 PNGG01000005.1 Protein Homology CDS 51340 52068 . + 0 ID=cds-PMC18010.1;Parent=gene-CJ235_09270;Dbxref=NCBI_GP:PMC18010.1;Name=PMC18010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471260.1;locus_tag=CJ235_09270;product=CPBP family intramembrane metalloprotease;protein_id=PMC18010.1;transl_table=11 PNGG01000005.1 Genbank gene 52086 52778 . - . ID=gene-CJ235_09275;Name=CJ235_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09275 PNGG01000005.1 Protein Homology CDS 52086 52778 . - 0 ID=cds-PMC18011.1;Parent=gene-CJ235_09275;Dbxref=NCBI_GP:PMC18011.1;Name=PMC18011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471301.1;locus_tag=CJ235_09275;product=HTH domain-containing protein;protein_id=PMC18011.1;transl_table=11 PNGG01000005.1 Genbank gene 53189 53980 . + . ID=gene-CJ235_09280;Name=CJ235_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09280 PNGG01000005.1 Protein Homology CDS 53189 53980 . + 0 ID=cds-PMC18012.1;Parent=gene-CJ235_09280;Dbxref=NCBI_GP:PMC18012.1;Name=PMC18012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506900.1;locus_tag=CJ235_09280;product=inositol monophosphatase;protein_id=PMC18012.1;transl_table=11 PNGG01000005.1 Genbank gene 54376 55332 . + . ID=gene-CJ235_09285;Name=CJ235_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09285 PNGG01000005.1 Protein Homology CDS 54376 55332 . + 0 ID=cds-PMC18013.1;Parent=gene-CJ235_09285;Dbxref=NCBI_GP:PMC18013.1;Name=PMC18013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471331.1;locus_tag=CJ235_09285;product=LytR family transcriptional regulator;protein_id=PMC18013.1;transl_table=11 PNGG01000005.1 Genbank gene 55756 58710 . + . ID=gene-CJ235_09290;Name=CJ235_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09290 PNGG01000005.1 Protein Homology CDS 55756 58710 . + 0 ID=cds-PMC18014.1;Parent=gene-CJ235_09290;Dbxref=NCBI_GP:PMC18014.1;Name=PMC18014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501044.1;locus_tag=CJ235_09290;product=formate dehydrogenase subunit alpha;protein_id=PMC18014.1;transl_table=11 PNGG01000005.1 Genbank gene 58710 59180 . + . ID=gene-CJ235_09295;Name=CJ235_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09295 PNGG01000005.1 Protein Homology CDS 58710 59180 . + 0 ID=cds-PMC18015.1;Parent=gene-CJ235_09295;Dbxref=NCBI_GP:PMC18015.1;Name=PMC18015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501043.1;locus_tag=CJ235_09295;product=DUF1641 domain-containing protein;protein_id=PMC18015.1;transl_table=11 PNGG01000005.1 Genbank gene 59426 59656 . + . ID=gene-CJ235_09300;Name=CJ235_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09300 PNGG01000005.1 Protein Homology CDS 59426 59656 . + 0 ID=cds-PMC18016.1;Parent=gene-CJ235_09300;Dbxref=NCBI_GP:PMC18016.1;Name=PMC18016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496354.1;locus_tag=CJ235_09300;product=hypothetical protein;protein_id=PMC18016.1;transl_table=11 PNGG01000005.1 Genbank gene 59684 60460 . + . ID=gene-CJ235_09305;Name=CJ235_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09305 PNGG01000005.1 Protein Homology CDS 59684 60460 . + 0 ID=cds-PMC18017.1;Parent=gene-CJ235_09305;Dbxref=NCBI_GP:PMC18017.1;Name=PMC18017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471311.1;locus_tag=CJ235_09305;product=autolysin;protein_id=PMC18017.1;transl_table=11 PNGG01000005.1 Genbank gene 60585 61709 . + . ID=gene-CJ235_09310;Name=CJ235_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09310 PNGG01000005.1 Protein Homology CDS 60585 61709 . + 0 ID=cds-PMC18018.1;Parent=gene-CJ235_09310;Dbxref=NCBI_GP:PMC18018.1;Name=PMC18018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506906.1;locus_tag=CJ235_09310;product=hypothetical protein;protein_id=PMC18018.1;transl_table=11 PNGG01000005.1 Genbank gene 61781 62740 . - . ID=gene-CJ235_09315;Name=CJ235_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09315 PNGG01000005.1 Protein Homology CDS 61781 62740 . - 0 ID=cds-PMC18019.1;Parent=gene-CJ235_09315;Dbxref=NCBI_GP:PMC18019.1;Name=PMC18019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448389.1;locus_tag=CJ235_09315;product=hydroxyacid dehydrogenase;protein_id=PMC18019.1;transl_table=11 PNGG01000005.1 Genbank gene 63027 63341 . - . ID=gene-CJ235_09320;Name=CJ235_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09320 PNGG01000005.1 Protein Homology CDS 63027 63341 . - 0 ID=cds-PMC18020.1;Parent=gene-CJ235_09320;Dbxref=NCBI_GP:PMC18020.1;Name=PMC18020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506908.1;locus_tag=CJ235_09320;product=QacE family quaternary ammonium compound efflux SMR transporter;protein_id=PMC18020.1;transl_table=11 PNGG01000005.1 Genbank gene 63341 63661 . - . ID=gene-CJ235_09325;Name=CJ235_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09325 PNGG01000005.1 Protein Homology CDS 63341 63661 . - 0 ID=cds-PMC18021.1;Parent=gene-CJ235_09325;Dbxref=NCBI_GP:PMC18021.1;Name=PMC18021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506909.1;locus_tag=CJ235_09325;product=QacE family quaternary ammonium compound efflux SMR transporter;protein_id=PMC18021.1;transl_table=11 PNGG01000005.1 Genbank gene 63806 64363 . - . ID=gene-CJ235_09330;Name=CJ235_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09330 PNGG01000005.1 GeneMarkS+ CDS 63806 64363 . - 0 ID=cds-PMC18022.1;Parent=gene-CJ235_09330;Dbxref=NCBI_GP:PMC18022.1;Name=PMC18022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09330;product=DUF4870 domain-containing protein;protein_id=PMC18022.1;transl_table=11 PNGG01000005.1 Genbank gene 64400 64720 . - . ID=gene-CJ235_09335;Name=CJ235_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09335 PNGG01000005.1 Protein Homology CDS 64400 64720 . - 0 ID=cds-PMC18023.1;Parent=gene-CJ235_09335;Dbxref=NCBI_GP:PMC18023.1;Name=PMC18023.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09685.8;locus_tag=CJ235_09335;product=DUF4870 domain-containing protein;protein_id=PMC18023.1;transl_table=11 PNGG01000005.1 Genbank gene 64711 64974 . - . ID=gene-CJ235_09340;Name=CJ235_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09340 PNGG01000005.1 GeneMarkS+ CDS 64711 64974 . - 0 ID=cds-PMC18024.1;Parent=gene-CJ235_09340;Dbxref=NCBI_GP:PMC18024.1;Name=PMC18024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09340;product=hypothetical protein;protein_id=PMC18024.1;transl_table=11 PNGG01000005.1 Genbank gene 65209 66279 . + . ID=gene-CJ235_09345;Name=CJ235_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09345 PNGG01000005.1 Protein Homology CDS 65209 66279 . + 0 ID=cds-PMC18025.1;Parent=gene-CJ235_09345;Dbxref=NCBI_GP:PMC18025.1;Name=PMC18025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765429.1;locus_tag=CJ235_09345;product=octopine dehydrogenase;protein_id=PMC18025.1;transl_table=11 PNGG01000005.1 Genbank gene 66301 67719 . + . ID=gene-CJ235_09350;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CJ235_09350 PNGG01000005.1 Protein Homology CDS 66301 67719 . + 0 ID=cds-PMC18026.1;Parent=gene-CJ235_09350;Dbxref=NCBI_GP:PMC18026.1;Name=PMC18026.1;gbkey=CDS;gene=nhaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471352.1;locus_tag=CJ235_09350;product=Na+/H+ antiporter NhaC;protein_id=PMC18026.1;transl_table=11 PNGG01000005.1 Genbank gene 68380 69150 . - . ID=gene-CJ235_09355;Name=CJ235_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09355 PNGG01000005.1 Protein Homology CDS 68380 69150 . - 0 ID=cds-PMC18027.1;Parent=gene-CJ235_09355;Dbxref=NCBI_GP:PMC18027.1;Name=PMC18027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471256.1;locus_tag=CJ235_09355;product=CHAP domain-containing protein;protein_id=PMC18027.1;transl_table=11 PNGG01000005.1 Genbank gene 69663 70715 . + . ID=gene-CJ235_09360;Name=CJ235_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09360 PNGG01000005.1 Protein Homology CDS 69663 70715 . + 0 ID=cds-PMC18028.1;Parent=gene-CJ235_09360;Dbxref=NCBI_GP:PMC18028.1;Name=PMC18028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506918.1;locus_tag=CJ235_09360;product=LLM class flavin-dependent oxidoreductase;protein_id=PMC18028.1;transl_table=11 PNGG01000005.1 Genbank gene 70733 71095 . + . ID=gene-CJ235_09365;Name=CJ235_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09365 PNGG01000005.1 Protein Homology CDS 70733 71095 . + 0 ID=cds-PMC18029.1;Parent=gene-CJ235_09365;Dbxref=NCBI_GP:PMC18029.1;Name=PMC18029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506919.1;locus_tag=CJ235_09365;product=hypothetical protein;protein_id=PMC18029.1;transl_table=11 PNGG01000005.1 Genbank gene 71890 72246 . + . ID=gene-CJ235_09370;Name=CJ235_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09370 PNGG01000005.1 Protein Homology CDS 71890 72246 . + 0 ID=cds-PMC18030.1;Parent=gene-CJ235_09370;Dbxref=NCBI_GP:PMC18030.1;Name=PMC18030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01889;locus_tag=CJ235_09370;product=hypothetical protein;protein_id=PMC18030.1;transl_table=11 PNGG01000005.1 Genbank gene 72360 73055 . - . ID=gene-CJ235_09375;Name=CJ235_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09375 PNGG01000005.1 Protein Homology CDS 72360 73055 . - 0 ID=cds-PMC18031.1;Parent=gene-CJ235_09375;Dbxref=NCBI_GP:PMC18031.1;Name=PMC18031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482569.1;locus_tag=CJ235_09375;product=amino acid ABC transporter permease;protein_id=PMC18031.1;transl_table=11 PNGG01000005.1 Genbank gene 73068 73748 . - . ID=gene-CJ235_09380;Name=CJ235_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09380 PNGG01000005.1 Protein Homology CDS 73068 73748 . - 0 ID=cds-PMC18032.1;Parent=gene-CJ235_09380;Dbxref=NCBI_GP:PMC18032.1;Name=PMC18032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468312.1;locus_tag=CJ235_09380;product=amino acid ABC transporter permease;protein_id=PMC18032.1;transl_table=11 PNGG01000005.1 Genbank gene 73748 74608 . - . ID=gene-CJ235_09385;Name=CJ235_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09385 PNGG01000005.1 Protein Homology CDS 73748 74608 . - 0 ID=cds-PMC18033.1;Parent=gene-CJ235_09385;Dbxref=NCBI_GP:PMC18033.1;Name=PMC18033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471356.1;locus_tag=CJ235_09385;product=amino acid ABC transporter substrate-binding protein;protein_id=PMC18033.1;transl_table=11 PNGG01000005.1 Genbank gene 74608 75354 . - . ID=gene-CJ235_09390;Name=CJ235_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09390 PNGG01000005.1 Protein Homology CDS 74608 75354 . - 0 ID=cds-PMC18034.1;Parent=gene-CJ235_09390;Dbxref=NCBI_GP:PMC18034.1;Name=PMC18034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471305.1;locus_tag=CJ235_09390;product=amino acid ABC transporter ATP-binding protein;protein_id=PMC18034.1;transl_table=11 PNGG01000005.1 Genbank gene 75502 76650 . + . ID=gene-CJ235_09395;Name=CJ235_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09395 PNGG01000005.1 Protein Homology CDS 75502 76650 . + 0 ID=cds-PMC18035.1;Parent=gene-CJ235_09395;Dbxref=NCBI_GP:PMC18035.1;Name=PMC18035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471368.1;locus_tag=CJ235_09395;product=acyl-CoA dehydrogenase;protein_id=PMC18035.1;transl_table=11 PNGG01000005.1 Genbank gene 77079 77990 . + . ID=gene-CJ235_09400;Name=CJ235_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09400 PNGG01000005.1 Protein Homology CDS 77079 77990 . + 0 ID=cds-PMC18036.1;Parent=gene-CJ235_09400;Dbxref=NCBI_GP:PMC18036.1;Name=PMC18036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471258.1;locus_tag=CJ235_09400;product=ferrichrome ABC transporter substrate-binding protein;protein_id=PMC18036.1;transl_table=11 PNGG01000005.1 Genbank gene 78152 78706 . + . ID=gene-CJ235_09405;Name=CJ235_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09405 PNGG01000005.1 Protein Homology CDS 78152 78706 . + 0 ID=cds-PMC18037.1;Parent=gene-CJ235_09405;Dbxref=NCBI_GP:PMC18037.1;Name=PMC18037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471276.1;locus_tag=CJ235_09405;product=biotin transporter BioY;protein_id=PMC18037.1;transl_table=11 PNGG01000005.1 Genbank gene 78727 79491 . + . ID=gene-CJ235_09410;Name=CJ235_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09410 PNGG01000005.1 Protein Homology CDS 78727 79491 . + 0 ID=cds-PMC18038.1;Parent=gene-CJ235_09410;Dbxref=NCBI_GP:PMC18038.1;Name=PMC18038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302566.1;locus_tag=CJ235_09410;product=N-acetyltransferase;protein_id=PMC18038.1;transl_table=11 PNGG01000005.1 Genbank gene 79681 80478 . - . ID=gene-CJ235_09415;Name=CJ235_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09415 PNGG01000005.1 Protein Homology CDS 79681 80478 . - 0 ID=cds-PMC18039.1;Parent=gene-CJ235_09415;Dbxref=NCBI_GP:PMC18039.1;Name=PMC18039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302567.1;locus_tag=CJ235_09415;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=PMC18039.1;transl_table=11 PNGG01000005.1 Genbank gene 80730 81890 . + . ID=gene-CJ235_09420;Name=CJ235_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09420 PNGG01000005.1 Protein Homology CDS 80730 81890 . + 0 ID=cds-PMC18040.1;Parent=gene-CJ235_09420;Dbxref=NCBI_GP:PMC18040.1;Name=PMC18040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482579.1;locus_tag=CJ235_09420;product=galactokinase;protein_id=PMC18040.1;transl_table=11 PNGG01000005.1 Genbank gene 81991 82998 . + . ID=gene-CJ235_09425;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CJ235_09425 PNGG01000005.1 Protein Homology CDS 81991 82998 . + 0 ID=cds-PMC18041.1;Parent=gene-CJ235_09425;Dbxref=NCBI_GP:PMC18041.1;Name=PMC18041.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471370.1;locus_tag=CJ235_09425;product=UDP-glucose 4-epimerase GalE;protein_id=PMC18041.1;transl_table=11 PNGG01000005.1 Genbank gene 82998 84491 . + . ID=gene-CJ235_09430;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CJ235_09430 PNGG01000005.1 Protein Homology CDS 82998 84491 . + 0 ID=cds-PMC18042.1;Parent=gene-CJ235_09430;Dbxref=NCBI_GP:PMC18042.1;Name=PMC18042.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506935.1;locus_tag=CJ235_09430;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=PMC18042.1;transl_table=11 PNGG01000005.1 Genbank gene 84685 85776 . + . ID=gene-CJ235_09435;Name=CJ235_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09435 PNGG01000005.1 Protein Homology CDS 84685 85776 . + 0 ID=cds-PMC18043.1;Parent=gene-CJ235_09435;Dbxref=NCBI_GP:PMC18043.1;Name=PMC18043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13560.4;locus_tag=CJ235_09435;product=XRE family transcriptional regulator;protein_id=PMC18043.1;transl_table=11 PNGG01000005.1 Genbank gene 86015 86854 . + . ID=gene-CJ235_09440;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CJ235_09440 PNGG01000005.1 Protein Homology CDS 86015 86854 . + 0 ID=cds-PMC18044.1;Parent=gene-CJ235_09440;Dbxref=NCBI_GP:PMC18044.1;Name=PMC18044.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432765.1;locus_tag=CJ235_09440;product=molybdate ABC transporter substrate-binding protein;protein_id=PMC18044.1;transl_table=11 PNGG01000005.1 Genbank gene 86867 87538 . + . ID=gene-CJ235_09445;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CJ235_09445 PNGG01000005.1 Protein Homology CDS 86867 87538 . + 0 ID=cds-PMC18045.1;Parent=gene-CJ235_09445;Dbxref=NCBI_GP:PMC18045.1;Name=PMC18045.1;gbkey=CDS;gene=modB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765406.1;locus_tag=CJ235_09445;product=molybdate ABC transporter permease subunit;protein_id=PMC18045.1;transl_table=11 PNGG01000005.1 Genbank gene 87539 88177 . + . ID=gene-CJ235_09450;Name=CJ235_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09450 PNGG01000005.1 Protein Homology CDS 87539 88177 . + 0 ID=cds-PMC18046.1;Parent=gene-CJ235_09450;Dbxref=NCBI_GP:PMC18046.1;Name=PMC18046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471322.1;locus_tag=CJ235_09450;product=molybdenum ABC transporter ATP-binding protein;protein_id=PMC18046.1;transl_table=11 PNGG01000005.1 Genbank gene 88256 88819 . - . ID=gene-CJ235_09455;Name=CJ235_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09455 PNGG01000005.1 Protein Homology CDS 88256 88819 . - 0 ID=cds-PMC18047.1;Parent=gene-CJ235_09455;Dbxref=NCBI_GP:PMC18047.1;Name=PMC18047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471249.1;locus_tag=CJ235_09455;product=GbsR/MarR family transcriptional regulator;protein_id=PMC18047.1;transl_table=11 PNGG01000005.1 Genbank gene 89029 90030 . + . ID=gene-CJ235_09460;Name=CJ235_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09460 PNGG01000005.1 Protein Homology CDS 89029 90030 . + 0 ID=cds-PMC18048.1;Parent=gene-CJ235_09460;Dbxref=NCBI_GP:PMC18048.1;Name=PMC18048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471317.1;locus_tag=CJ235_09460;product=molybdopterin biosynthesis protein MoeB;protein_id=PMC18048.1;transl_table=11 PNGG01000005.1 Genbank gene 90053 90568 . + . ID=gene-CJ235_09465;Name=CJ235_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09465 PNGG01000005.1 Protein Homology CDS 90053 90568 . + 0 ID=cds-PMC18049.1;Parent=gene-CJ235_09465;Dbxref=NCBI_GP:PMC18049.1;Name=PMC18049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901005.1;locus_tag=CJ235_09465;product=molybdenum cofactor biosynthesis protein MoaB;protein_id=PMC18049.1;transl_table=11 PNGG01000005.1 Genbank gene 90634 91122 . - . ID=gene-CJ235_09470;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CJ235_09470 PNGG01000005.1 Protein Homology CDS 90634 91122 . - 0 ID=cds-PMC18050.1;Parent=gene-CJ235_09470;Dbxref=NCBI_GP:PMC18050.1;Name=PMC18050.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471334.1;locus_tag=CJ235_09470;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=PMC18050.1;transl_table=11 PNGG01000005.1 Genbank gene 91184 92443 . + . ID=gene-CJ235_09475;Name=CJ235_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09475 PNGG01000005.1 Protein Homology CDS 91184 92443 . + 0 ID=cds-PMC18051.1;Parent=gene-CJ235_09475;Dbxref=NCBI_GP:PMC18051.1;Name=PMC18051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275102.1;locus_tag=CJ235_09475;product=molybdopterin molybdenumtransferase MoeA;protein_id=PMC18051.1;transl_table=11 PNGG01000005.1 Genbank gene 92440 92910 . + . ID=gene-CJ235_09480;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CJ235_09480 PNGG01000005.1 Protein Homology CDS 92440 92910 . + 0 ID=cds-PMC18052.1;Parent=gene-CJ235_09480;Dbxref=NCBI_GP:PMC18052.1;Name=PMC18052.1;gbkey=CDS;gene=mobB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471367.1;locus_tag=CJ235_09480;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=PMC18052.1;transl_table=11 PNGG01000005.1 Genbank gene 92911 93360 . + . ID=gene-CJ235_09485;Name=CJ235_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09485 PNGG01000005.1 Protein Homology CDS 92911 93360 . + 0 ID=cds-PMC18053.1;Parent=gene-CJ235_09485;Dbxref=NCBI_GP:PMC18053.1;Name=PMC18053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471355.1;locus_tag=CJ235_09485;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=PMC18053.1;transl_table=11 PNGG01000005.1 Genbank gene 93360 93593 . + . ID=gene-CJ235_09490;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CJ235_09490 PNGG01000005.1 Protein Homology CDS 93360 93593 . + 0 ID=cds-PMC18054.1;Parent=gene-CJ235_09490;Dbxref=NCBI_GP:PMC18054.1;Name=PMC18054.1;gbkey=CDS;gene=moaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482593.1;locus_tag=CJ235_09490;product=molybdopterin converting factor subunit 1;protein_id=PMC18054.1;transl_table=11 PNGG01000005.1 Genbank gene 93597 94199 . + . ID=gene-CJ235_09495;Name=CJ235_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09495 PNGG01000005.1 Protein Homology CDS 93597 94199 . + 0 ID=cds-PMC18055.1;Parent=gene-CJ235_09495;Dbxref=NCBI_GP:PMC18055.1;Name=PMC18055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471354.1;locus_tag=CJ235_09495;product=molybdenum cofactor guanylyltransferase MobA;protein_id=PMC18055.1;transl_table=11 PNGG01000005.1 Genbank gene 94217 95239 . + . ID=gene-CJ235_09500;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CJ235_09500 PNGG01000005.1 Protein Homology CDS 94217 95239 . + 0 ID=cds-PMC18056.1;Parent=gene-CJ235_09500;Dbxref=NCBI_GP:PMC18056.1;Name=PMC18056.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CJ235_09500;product=GTP 3'%2C8-cyclase MoaA;protein_id=PMC18056.1;transl_table=11 PNGG01000005.1 Genbank gene 95560 96774 . - . ID=gene-CJ235_09505;Name=CJ235_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09505 PNGG01000005.1 Protein Homology CDS 95560 96774 . - 0 ID=cds-PMC18057.1;Parent=gene-CJ235_09505;Dbxref=NCBI_GP:PMC18057.1;Name=PMC18057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900996.1;locus_tag=CJ235_09505;product=MFS transporter;protein_id=PMC18057.1;transl_table=11 PNGG01000005.1 Genbank gene 96775 97212 . - . ID=gene-CJ235_09510;Name=CJ235_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09510 PNGG01000005.1 Protein Homology CDS 96775 97212 . - 0 ID=cds-PMC18058.1;Parent=gene-CJ235_09510;Dbxref=NCBI_GP:PMC18058.1;Name=PMC18058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471318.1;locus_tag=CJ235_09510;product=MarR family transcriptional regulator;protein_id=PMC18058.1;transl_table=11 PNGG01000005.1 Genbank gene 97426 98178 . + . ID=gene-CJ235_09515;Name=CJ235_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09515 PNGG01000005.1 Protein Homology CDS 97426 98178 . + 0 ID=cds-PMC18059.1;Parent=gene-CJ235_09515;Dbxref=NCBI_GP:PMC18059.1;Name=PMC18059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471253.1;locus_tag=CJ235_09515;product=VOC family protein;protein_id=PMC18059.1;transl_table=11 PNGG01000005.1 Genbank gene 98182 98433 . - . ID=gene-CJ235_09520;Name=CJ235_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09520 PNGG01000005.1 Protein Homology CDS 98182 98433 . - 0 ID=cds-PMC18060.1;Parent=gene-CJ235_09520;Dbxref=NCBI_GP:PMC18060.1;Name=PMC18060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471271.1;locus_tag=CJ235_09520;product=hypothetical protein;protein_id=PMC18060.1;transl_table=11 PNGG01000005.1 Genbank gene 98559 99812 . + . ID=gene-CJ235_09525;Name=CJ235_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09525 PNGG01000005.1 Protein Homology CDS 98559 99812 . + 0 ID=cds-PMC18061.1;Parent=gene-CJ235_09525;Dbxref=NCBI_GP:PMC18061.1;Name=PMC18061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471282.1;locus_tag=CJ235_09525;product=N-acetyltransferase;protein_id=PMC18061.1;transl_table=11 PNGG01000005.1 Genbank gene 100229 103324 . + . ID=gene-CJ235_09530;Name=CJ235_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09530 PNGG01000005.1 Protein Homology CDS 100229 103324 . + 0 ID=cds-PMC18062.1;Parent=gene-CJ235_09530;Dbxref=NCBI_GP:PMC18062.1;Name=PMC18062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506954.1;locus_tag=CJ235_09530;product=AcrB/AcrD/AcrF family protein;protein_id=PMC18062.1;transl_table=11 PNGG01000005.1 Genbank gene 103779 104096 . - . ID=gene-CJ235_09535;Name=CJ235_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09535 PNGG01000005.1 Protein Homology CDS 103779 104096 . - 0 ID=cds-PMC18063.1;Parent=gene-CJ235_09535;Dbxref=NCBI_GP:PMC18063.1;Name=PMC18063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468078.1;locus_tag=CJ235_09535;product=hypothetical protein;protein_id=PMC18063.1;transl_table=11 PNGG01000005.1 Genbank gene 104506 105414 . + . ID=gene-CJ235_09540;Name=CJ235_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09540 PNGG01000005.1 Protein Homology CDS 104506 105414 . + 0 ID=cds-PMC18064.1;Parent=gene-CJ235_09540;Dbxref=NCBI_GP:PMC18064.1;Name=PMC18064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506957.1;locus_tag=CJ235_09540;product=AEC family transporter;protein_id=PMC18064.1;transl_table=11 PNGG01000005.1 Genbank gene 105478 106353 . - . ID=gene-CJ235_09545;Name=CJ235_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09545 PNGG01000005.1 Protein Homology CDS 105478 106353 . - 0 ID=cds-PMC18065.1;Parent=gene-CJ235_09545;Dbxref=NCBI_GP:PMC18065.1;Name=PMC18065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471286.1;locus_tag=CJ235_09545;product=N-acetyltransferase;protein_id=PMC18065.1;transl_table=11 PNGG01000005.1 Genbank gene 106485 108623 . + . ID=gene-CJ235_09550;Name=CJ235_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09550 PNGG01000005.1 Protein Homology CDS 106485 108623 . + 0 ID=cds-PMC18066.1;Parent=gene-CJ235_09550;Dbxref=NCBI_GP:PMC18066.1;Name=PMC18066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500982.1;locus_tag=CJ235_09550;product=DNA topoisomerase III;protein_id=PMC18066.1;transl_table=11 PNGG01000005.1 Genbank gene 108729 110063 . + . ID=gene-CJ235_09555;Name=CJ235_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09555 PNGG01000005.1 Protein Homology CDS 108729 110063 . + 0 ID=cds-PMC18067.1;Parent=gene-CJ235_09555;Dbxref=NCBI_GP:PMC18067.1;Name=PMC18067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302596.1;locus_tag=CJ235_09555;product=NCS2 family permease;protein_id=PMC18067.1;transl_table=11 PNGG01000005.1 Genbank gene 110250 110630 . - . ID=gene-CJ235_09560;Name=CJ235_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09560 PNGG01000005.1 Protein Homology CDS 110250 110630 . - 0 ID=cds-PMC18068.1;Parent=gene-CJ235_09560;Dbxref=NCBI_GP:PMC18068.1;Name=PMC18068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471280.1;locus_tag=CJ235_09560;product=hypothetical protein;protein_id=PMC18068.1;transl_table=11 PNGG01000005.1 Genbank gene 110990 111298 . + . ID=gene-CJ235_09565;Name=CJ235_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09565 PNGG01000005.1 Protein Homology CDS 110990 111298 . + 0 ID=cds-PMC18069.1;Parent=gene-CJ235_09565;Dbxref=NCBI_GP:PMC18069.1;Name=PMC18069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CJ235_09565;product=30S ribosomal protein S10;protein_id=PMC18069.1;transl_table=11 PNGG01000005.1 Genbank gene 111326 111988 . + . ID=gene-CJ235_09570;Name=CJ235_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09570 PNGG01000005.1 Protein Homology CDS 111326 111988 . + 0 ID=cds-PMC18070.1;Parent=gene-CJ235_09570;Dbxref=NCBI_GP:PMC18070.1;Name=PMC18070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160215.1;locus_tag=CJ235_09570;product=50S ribosomal protein L3;protein_id=PMC18070.1;transl_table=11 PNGG01000005.1 Genbank gene 112015 112638 . + . ID=gene-CJ235_09575;Name=CJ235_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09575 PNGG01000005.1 Protein Homology CDS 112015 112638 . + 0 ID=cds-PMC18071.1;Parent=gene-CJ235_09575;Dbxref=NCBI_GP:PMC18071.1;Name=PMC18071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=CJ235_09575;product=50S ribosomal protein L4;protein_id=PMC18071.1;transl_table=11 PNGG01000005.1 Genbank gene 112638 112913 . + . ID=gene-CJ235_09580;Name=CJ235_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09580 PNGG01000005.1 Protein Homology CDS 112638 112913 . + 0 ID=cds-PMC18072.1;Parent=gene-CJ235_09580;Dbxref=NCBI_GP:PMC18072.1;Name=PMC18072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CJ235_09580;product=50S ribosomal protein L23;protein_id=PMC18072.1;transl_table=11 PNGG01000005.1 Genbank gene 112945 113784 . + . ID=gene-CJ235_09585;Name=CJ235_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09585 PNGG01000005.1 Protein Homology CDS 112945 113784 . + 0 ID=cds-PMC18073.1;Parent=gene-CJ235_09585;Dbxref=NCBI_GP:PMC18073.1;Name=PMC18073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471377.1;locus_tag=CJ235_09585;product=50S ribosomal protein L2;protein_id=PMC18073.1;transl_table=11 PNGG01000005.1 Genbank gene 113851 114129 . + . ID=gene-CJ235_09590;Name=CJ235_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09590 PNGG01000005.1 Protein Homology CDS 113851 114129 . + 0 ID=cds-PMC18074.1;Parent=gene-CJ235_09590;Dbxref=NCBI_GP:PMC18074.1;Name=PMC18074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829710.1;locus_tag=CJ235_09590;product=30S ribosomal protein S19;protein_id=PMC18074.1;transl_table=11 PNGG01000005.1 Genbank gene 114158 114511 . + . ID=gene-CJ235_09595;Name=CJ235_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09595 PNGG01000005.1 Protein Homology CDS 114158 114511 . + 0 ID=cds-PMC18075.1;Parent=gene-CJ235_09595;Dbxref=NCBI_GP:PMC18075.1;Name=PMC18075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CJ235_09595;product=50S ribosomal protein L22;protein_id=PMC18075.1;transl_table=11 PNGG01000005.1 Genbank gene 114535 115188 . + . ID=gene-CJ235_09600;Name=CJ235_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09600 PNGG01000005.1 Protein Homology CDS 114535 115188 . + 0 ID=cds-PMC18076.1;Parent=gene-CJ235_09600;Dbxref=NCBI_GP:PMC18076.1;Name=PMC18076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479565.1;locus_tag=CJ235_09600;product=30S ribosomal protein S3;protein_id=PMC18076.1;transl_table=11 PNGG01000005.1 Genbank gene 115191 115625 . + . ID=gene-CJ235_09605;Name=CJ235_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09605 PNGG01000005.1 Protein Homology CDS 115191 115625 . + 0 ID=cds-PMC18077.1;Parent=gene-CJ235_09605;Dbxref=NCBI_GP:PMC18077.1;Name=PMC18077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CJ235_09605;product=50S ribosomal protein L16;protein_id=PMC18077.1;transl_table=11 PNGG01000005.1 Genbank gene 115615 115824 . + . ID=gene-CJ235_09610;Name=CJ235_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09610 PNGG01000005.1 Protein Homology CDS 115615 115824 . + 0 ID=cds-PMC18078.1;Parent=gene-CJ235_09610;Dbxref=NCBI_GP:PMC18078.1;Name=PMC18078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CJ235_09610;product=50S ribosomal protein L29;protein_id=PMC18078.1;transl_table=11 PNGG01000005.1 Genbank gene 115850 116113 . + . ID=gene-CJ235_09615;Name=CJ235_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09615 PNGG01000005.1 Protein Homology CDS 115850 116113 . + 0 ID=cds-PMC18079.1;Parent=gene-CJ235_09615;Dbxref=NCBI_GP:PMC18079.1;Name=PMC18079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CJ235_09615;product=30S ribosomal protein S17;protein_id=PMC18079.1;transl_table=11 PNGG01000005.1 Genbank gene 116143 116511 . + . ID=gene-CJ235_09620;Name=CJ235_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09620 PNGG01000005.1 Protein Homology CDS 116143 116511 . + 0 ID=cds-PMC18080.1;Parent=gene-CJ235_09620;Dbxref=NCBI_GP:PMC18080.1;Name=PMC18080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460061.1;locus_tag=CJ235_09620;product=50S ribosomal protein L14;protein_id=PMC18080.1;transl_table=11 PNGG01000005.1 Genbank gene 116549 116866 . + . ID=gene-CJ235_09625;Name=CJ235_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09625 PNGG01000005.1 Protein Homology CDS 116549 116866 . + 0 ID=cds-PMC18081.1;Parent=gene-CJ235_09625;Dbxref=NCBI_GP:PMC18081.1;Name=PMC18081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461784.1;locus_tag=CJ235_09625;product=50S ribosomal protein L24;protein_id=PMC18081.1;transl_table=11 PNGG01000005.1 Genbank gene 116891 117430 . + . ID=gene-CJ235_09630;Name=CJ235_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09630 PNGG01000005.1 Protein Homology CDS 116891 117430 . + 0 ID=cds-PMC18082.1;Parent=gene-CJ235_09630;Dbxref=NCBI_GP:PMC18082.1;Name=PMC18082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426360.1;locus_tag=CJ235_09630;product=50S ribosomal protein L5;protein_id=PMC18082.1;transl_table=11 PNGG01000005.1 Genbank gene 117451 117636 . + . ID=gene-CJ235_09635;Name=CJ235_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09635 PNGG01000005.1 Protein Homology CDS 117451 117636 . + 0 ID=cds-PMC18083.1;Parent=gene-CJ235_09635;Dbxref=NCBI_GP:PMC18083.1;Name=PMC18083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140799.1;locus_tag=CJ235_09635;product=30S ribosomal protein S14 type Z;protein_id=PMC18083.1;transl_table=11 PNGG01000005.1 Genbank gene 117668 118066 . + . ID=gene-CJ235_09640;Name=CJ235_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09640 PNGG01000005.1 Protein Homology CDS 117668 118066 . + 0 ID=cds-PMC18084.1;Parent=gene-CJ235_09640;Dbxref=NCBI_GP:PMC18084.1;Name=PMC18084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CJ235_09640;product=30S ribosomal protein S8;protein_id=PMC18084.1;transl_table=11 PNGG01000005.1 Genbank gene 118091 118627 . + . ID=gene-CJ235_09645;Name=CJ235_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09645 PNGG01000005.1 Protein Homology CDS 118091 118627 . + 0 ID=cds-PMC18085.1;Parent=gene-CJ235_09645;Dbxref=NCBI_GP:PMC18085.1;Name=PMC18085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CJ235_09645;product=50S ribosomal protein L6;protein_id=PMC18085.1;transl_table=11 PNGG01000005.1 Genbank gene 118659 119021 . + . ID=gene-CJ235_09650;Name=CJ235_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09650 PNGG01000005.1 Protein Homology CDS 118659 119021 . + 0 ID=cds-PMC18086.1;Parent=gene-CJ235_09650;Dbxref=NCBI_GP:PMC18086.1;Name=PMC18086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CJ235_09650;product=50S ribosomal protein L18;protein_id=PMC18086.1;transl_table=11 PNGG01000005.1 Genbank gene 119043 119543 . + . ID=gene-CJ235_09655;Name=CJ235_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09655 PNGG01000005.1 Protein Homology CDS 119043 119543 . + 0 ID=cds-PMC18087.1;Parent=gene-CJ235_09655;Dbxref=NCBI_GP:PMC18087.1;Name=PMC18087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CJ235_09655;product=30S ribosomal protein S5;protein_id=PMC18087.1;transl_table=11 PNGG01000005.1 Genbank gene 119560 119739 . + . ID=gene-CJ235_09660;Name=CJ235_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09660 PNGG01000005.1 Protein Homology CDS 119560 119739 . + 0 ID=cds-PMC18088.1;Parent=gene-CJ235_09660;Dbxref=NCBI_GP:PMC18088.1;Name=PMC18088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=CJ235_09660;product=50S ribosomal protein L30;protein_id=PMC18088.1;transl_table=11 PNGG01000005.1 Genbank gene 119756 120196 . + . ID=gene-CJ235_09665;Name=CJ235_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09665 PNGG01000005.1 Protein Homology CDS 119756 120196 . + 0 ID=cds-PMC18089.1;Parent=gene-CJ235_09665;Dbxref=NCBI_GP:PMC18089.1;Name=PMC18089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382766.1;locus_tag=CJ235_09665;product=50S ribosomal protein L15;protein_id=PMC18089.1;transl_table=11 PNGG01000005.1 Genbank gene 120196 121488 . + . ID=gene-CJ235_09670;Name=CJ235_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09670 PNGG01000005.1 Protein Homology CDS 120196 121488 . + 0 ID=cds-PMC18090.1;Parent=gene-CJ235_09670;Dbxref=NCBI_GP:PMC18090.1;Name=PMC18090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CJ235_09670;product=preprotein translocase subunit SecY;protein_id=PMC18090.1;transl_table=11 PNGG01000005.1 Genbank gene 121506 122156 . + . ID=gene-CJ235_09675;Name=CJ235_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09675 PNGG01000005.1 Protein Homology CDS 121506 122156 . + 0 ID=cds-PMC18091.1;Parent=gene-CJ235_09675;Dbxref=NCBI_GP:PMC18091.1;Name=PMC18091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=CJ235_09675;product=adenylate kinase;protein_id=PMC18091.1;transl_table=11 PNGG01000005.1 Genbank gene 122322 122540 . + . ID=gene-CJ235_09680;Name=CJ235_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09680 PNGG01000005.1 Protein Homology CDS 122322 122540 . + 0 ID=cds-PMC18092.1;Parent=gene-CJ235_09680;Dbxref=NCBI_GP:PMC18092.1;Name=PMC18092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=CJ235_09680;product=translation initiation factor IF-1;protein_id=PMC18092.1;transl_table=11 PNGG01000005.1 Genbank gene 122572 122685 . + . ID=gene-CJ235_09685;Name=CJ235_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09685 PNGG01000005.1 Protein Homology CDS 122572 122685 . + 0 ID=cds-PMC18093.1;Parent=gene-CJ235_09685;Dbxref=NCBI_GP:PMC18093.1;Name=PMC18093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009524358.1;locus_tag=CJ235_09685;product=50S ribosomal protein L36;protein_id=PMC18093.1;transl_table=11 PNGG01000005.1 Genbank gene 122708 123073 . + . ID=gene-CJ235_09690;Name=CJ235_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09690 PNGG01000005.1 Protein Homology CDS 122708 123073 . + 0 ID=cds-PMC18094.1;Parent=gene-CJ235_09690;Dbxref=NCBI_GP:PMC18094.1;Name=PMC18094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CJ235_09690;product=30S ribosomal protein S13;protein_id=PMC18094.1;transl_table=11 PNGG01000005.1 Genbank gene 123097 123486 . + . ID=gene-CJ235_09695;Name=CJ235_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09695 PNGG01000005.1 Protein Homology CDS 123097 123486 . + 0 ID=cds-PMC18095.1;Parent=gene-CJ235_09695;Dbxref=NCBI_GP:PMC18095.1;Name=PMC18095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CJ235_09695;product=30S ribosomal protein S11;protein_id=PMC18095.1;transl_table=11 PNGG01000005.1 Genbank gene 123563 124507 . + . ID=gene-CJ235_09700;Name=CJ235_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09700 PNGG01000005.1 Protein Homology CDS 123563 124507 . + 0 ID=cds-PMC18096.1;Parent=gene-CJ235_09700;Dbxref=NCBI_GP:PMC18096.1;Name=PMC18096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CJ235_09700;product=DNA-directed RNA polymerase subunit alpha;protein_id=PMC18096.1;transl_table=11 PNGG01000005.1 Genbank gene 124531 124899 . + . ID=gene-CJ235_09705;Name=CJ235_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09705 PNGG01000005.1 Protein Homology CDS 124531 124899 . + 0 ID=cds-PMC18097.1;Parent=gene-CJ235_09705;Dbxref=NCBI_GP:PMC18097.1;Name=PMC18097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CJ235_09705;product=50S ribosomal protein L17;protein_id=PMC18097.1;transl_table=11 PNGG01000005.1 Genbank gene 125384 126193 . + . ID=gene-CJ235_09710;Name=CJ235_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09710 PNGG01000005.1 Protein Homology CDS 125384 126193 . + 0 ID=cds-PMC18098.1;Parent=gene-CJ235_09710;Dbxref=NCBI_GP:PMC18098.1;Name=PMC18098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492265.1;locus_tag=CJ235_09710;product=energy-coupling factor transporter ATPase;protein_id=PMC18098.1;transl_table=11 PNGG01000005.1 Genbank gene 126190 127050 . + . ID=gene-CJ235_09715;Name=CJ235_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09715 PNGG01000005.1 Protein Homology CDS 126190 127050 . + 0 ID=cds-PMC18099.1;Parent=gene-CJ235_09715;Dbxref=NCBI_GP:PMC18099.1;Name=PMC18099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482640.1;locus_tag=CJ235_09715;product=energy-coupling factor transporter ATPase;protein_id=PMC18099.1;transl_table=11 PNGG01000005.1 Genbank gene 127040 127846 . + . ID=gene-CJ235_09720;Name=CJ235_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09720 PNGG01000005.1 Protein Homology CDS 127040 127846 . + 0 ID=cds-PMC18100.1;Parent=gene-CJ235_09720;Dbxref=NCBI_GP:PMC18100.1;Name=PMC18100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506989.1;locus_tag=CJ235_09720;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=PMC18100.1;transl_table=11 PNGG01000005.1 Genbank gene 127853 128656 . + . ID=gene-CJ235_09725;Name=CJ235_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09725 PNGG01000005.1 Protein Homology CDS 127853 128656 . + 0 ID=cds-PMC18101.1;Parent=gene-CJ235_09725;Dbxref=NCBI_GP:PMC18101.1;Name=PMC18101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471273.1;locus_tag=CJ235_09725;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=PMC18101.1;transl_table=11 PNGG01000005.1 Genbank gene 128858 129295 . + . ID=gene-CJ235_09730;Name=CJ235_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09730 PNGG01000005.1 Protein Homology CDS 128858 129295 . + 0 ID=cds-PMC18102.1;Parent=gene-CJ235_09730;Dbxref=NCBI_GP:PMC18102.1;Name=PMC18102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CJ235_09730;product=50S ribosomal protein L13;protein_id=PMC18102.1;transl_table=11 PNGG01000005.1 Genbank gene 129309 129707 . + . ID=gene-CJ235_09735;Name=CJ235_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09735 PNGG01000005.1 Protein Homology CDS 129309 129707 . + 0 ID=cds-PMC18103.1;Parent=gene-CJ235_09735;Dbxref=NCBI_GP:PMC18103.1;Name=PMC18103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500946.1;locus_tag=CJ235_09735;product=30S ribosomal protein S9;protein_id=PMC18103.1;transl_table=11 PNGG01000005.1 Genbank gene 129774 130508 . - . ID=gene-CJ235_09740;Name=CJ235_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09740 PNGG01000005.1 Protein Homology CDS 129774 130508 . - 0 ID=cds-PMC18123.1;Parent=gene-CJ235_09740;Dbxref=NCBI_GP:PMC18123.1;Name=PMC18123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471252.1;locus_tag=CJ235_09740;product=NAD-dependent protein deacylase;protein_id=PMC18123.1;transl_table=11 PNGG01000005.1 Genbank gene 130666 131424 . + . ID=gene-CJ235_09745;Name=CJ235_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09745 PNGG01000005.1 Protein Homology CDS 130666 131424 . + 0 ID=cds-PMC18104.1;Parent=gene-CJ235_09745;Dbxref=NCBI_GP:PMC18104.1;Name=PMC18104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471310.1;locus_tag=CJ235_09745;product=DeoR/GlpR transcriptional regulator;protein_id=PMC18104.1;transl_table=11 PNGG01000005.1 Genbank gene 131841 132269 . + . ID=gene-CJ235_09750;Name=CJ235_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09750 PNGG01000005.1 Protein Homology CDS 131841 132269 . + 0 ID=cds-PMC18105.1;Parent=gene-CJ235_09750;Dbxref=NCBI_GP:PMC18105.1;Name=PMC18105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471361.1;locus_tag=CJ235_09750;product=galactose-6-phosphate isomerase subunit LacA;protein_id=PMC18105.1;transl_table=11 PNGG01000005.1 Genbank gene 132282 132797 . + . ID=gene-CJ235_09755;Name=CJ235_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09755 PNGG01000005.1 Protein Homology CDS 132282 132797 . + 0 ID=cds-PMC18106.1;Parent=gene-CJ235_09755;Dbxref=NCBI_GP:PMC18106.1;Name=PMC18106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CJ235_09755;product=galactose-6-phosphate isomerase subunit LacB;protein_id=PMC18106.1;transl_table=11 PNGG01000005.1 Genbank gene 132828 133142 . + . ID=gene-CJ235_09760;Name=CJ235_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09760 PNGG01000005.1 Protein Homology CDS 132828 133142 . + 0 ID=cds-PMC18107.1;Parent=gene-CJ235_09760;Dbxref=NCBI_GP:PMC18107.1;Name=PMC18107.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471264.1;locus_tag=CJ235_09760;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=PMC18107.1;transl_table=11 PNGG01000005.1 Genbank gene 133148 134887 . + . ID=gene-CJ235_09765;Name=CJ235_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09765 PNGG01000005.1 Protein Homology CDS 133148 134887 . + 0 ID=cds-PMC18108.1;Parent=gene-CJ235_09765;Dbxref=NCBI_GP:PMC18108.1;Name=PMC18108.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275159.1;locus_tag=CJ235_09765;product=PTS lactose transporter subunit IIBC;protein_id=PMC18108.1;transl_table=11 PNGG01000005.1 Genbank gene 135059 135733 . + . ID=gene-CJ235_09770;Name=CJ235_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09770 PNGG01000005.1 Protein Homology CDS 135059 135733 . + 0 ID=cds-PMC18109.1;Parent=gene-CJ235_09770;Dbxref=NCBI_GP:PMC18109.1;Name=PMC18109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001106057.1;locus_tag=CJ235_09770;product=IS6 family transposase;protein_id=PMC18109.1;transl_table=11 PNGG01000005.1 Genbank gene 135818 136363 . - . ID=gene-CJ235_09775;Name=CJ235_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09775 PNGG01000005.1 Protein Homology CDS 135818 136363 . - 0 ID=cds-PMC18110.1;Parent=gene-CJ235_09775;Dbxref=NCBI_GP:PMC18110.1;Name=PMC18110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508682.1;locus_tag=CJ235_09775;product=recombinase family protein;protein_id=PMC18110.1;transl_table=11 PNGG01000005.1 Genbank gene 136578 137495 . - . ID=gene-CJ235_09780;Name=CJ235_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09780 PNGG01000005.1 Protein Homology CDS 136578 137495 . - 0 ID=cds-PMC18111.1;Parent=gene-CJ235_09780;Dbxref=NCBI_GP:PMC18111.1;Name=PMC18111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508711.1;locus_tag=CJ235_09780;product=DUF91 domain-containing protein;protein_id=PMC18111.1;transl_table=11 PNGG01000005.1 Genbank gene 137974 138369 . - . ID=gene-CJ235_09785;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CJ235_09785 PNGG01000005.1 Protein Homology CDS 137974 138369 . - 0 ID=cds-PMC18112.1;Parent=gene-CJ235_09785;Dbxref=NCBI_GP:PMC18112.1;Name=PMC18112.1;gbkey=CDS;gene=arsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509695.1;locus_tag=CJ235_09785;product=arsenate reductase (thioredoxin);protein_id=PMC18112.1;transl_table=11 PNGG01000005.1 Genbank gene 138388 139677 . - . ID=gene-CJ235_09790;Name=CJ235_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09790 PNGG01000005.1 Protein Homology CDS 138388 139677 . - 0 ID=cds-PMC18124.1;Parent=gene-CJ235_09790;Dbxref=NCBI_GP:PMC18124.1;Name=PMC18124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763690.1;locus_tag=CJ235_09790;product=arsenic transporter;protein_id=PMC18124.1;transl_table=11 PNGG01000005.1 Genbank gene 139680 139994 . - . ID=gene-CJ235_09795;Name=CJ235_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09795 PNGG01000005.1 Protein Homology CDS 139680 139994 . - 0 ID=cds-PMC18113.1;Parent=gene-CJ235_09795;Dbxref=NCBI_GP:PMC18113.1;Name=PMC18113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763691.1;locus_tag=CJ235_09795;product=ArsR family transcriptional regulator;protein_id=PMC18113.1;transl_table=11 PNGG01000005.1 Genbank gene 139991 141655 . - . ID=gene-CJ235_09800;Name=CJ235_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09800 PNGG01000005.1 Protein Homology CDS 139991 141655 . - 0 ID=cds-PMC18114.1;Parent=gene-CJ235_09800;Dbxref=NCBI_GP:PMC18114.1;Name=PMC18114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488499.1;locus_tag=CJ235_09800;product=dehydrogenase;protein_id=PMC18114.1;transl_table=11 PNGG01000005.1 Genbank gene 141655 143397 . - . ID=gene-CJ235_09805;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=CJ235_09805 PNGG01000005.1 Protein Homology CDS 141655 143397 . - 0 ID=cds-PMC18115.1;Parent=gene-CJ235_09805;Dbxref=NCBI_GP:PMC18115.1;Name=PMC18115.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763692.1;locus_tag=CJ235_09805;product=arsenical pump-driving ATPase;protein_id=PMC18115.1;transl_table=11 PNGG01000005.1 Genbank gene 143363 143710 . - . ID=gene-CJ235_09810;Name=CJ235_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09810 PNGG01000005.1 Protein Homology CDS 143363 143710 . - 0 ID=cds-PMC18116.1;Parent=gene-CJ235_09810;Dbxref=NCBI_GP:PMC18116.1;Name=PMC18116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763693.1;locus_tag=CJ235_09810;product=arsenical resistance operon transcriptional repressor ArsD;protein_id=PMC18116.1;transl_table=11 PNGG01000005.1 Genbank gene 143992 144186 . + . ID=gene-CJ235_09815;Name=CJ235_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09815 PNGG01000005.1 Protein Homology CDS 143992 144186 . + 0 ID=cds-PMC18117.1;Parent=gene-CJ235_09815;Dbxref=NCBI_GP:PMC18117.1;Name=PMC18117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454594.1;locus_tag=CJ235_09815;product=hypothetical protein;protein_id=PMC18117.1;transl_table=11 PNGG01000005.1 Genbank gene 144232 144552 . + . ID=gene-CJ235_09820;Name=CJ235_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09820 PNGG01000005.1 Protein Homology CDS 144232 144552 . + 0 ID=cds-PMC18118.1;Parent=gene-CJ235_09820;Dbxref=NCBI_GP:PMC18118.1;Name=PMC18118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763694.1;locus_tag=CJ235_09820;product=F0F1 ATP synthase subunit delta;protein_id=PMC18118.1;transl_table=11 PNGG01000005.1 Genbank gene 144640 145524 . + . ID=gene-CJ235_09825;Name=CJ235_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09825 PNGG01000005.1 Protein Homology CDS 144640 145524 . + 0 ID=cds-PMC18119.1;Parent=gene-CJ235_09825;Dbxref=NCBI_GP:PMC18119.1;Name=PMC18119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763695.1;locus_tag=CJ235_09825;product=permease;protein_id=PMC18119.1;transl_table=11 PNGG01000005.1 Genbank gene 145538 145672 . + . ID=gene-CJ235_09830;Name=CJ235_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09830 PNGG01000005.1 Protein Homology CDS 145538 145672 . + 0 ID=cds-PMC18120.1;Parent=gene-CJ235_09830;Dbxref=NCBI_GP:PMC18120.1;Name=PMC18120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361277.1;locus_tag=CJ235_09830;product=alcohol dehydrogenase;protein_id=PMC18120.1;transl_table=11 PNGG01000005.1 Genbank pseudogene 145911 147408 . + . ID=gene-CJ235_09835;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=pseudogene;locus_tag=CJ235_09835;pseudo=true PNGG01000005.1 Protein Homology CDS 145911 147408 . + 0 ID=cds-CJ235_09835;Parent=gene-CJ235_09835;Note=frameshifted;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302082.1;locus_tag=CJ235_09835;product=malate dehydrogenase (quinone);pseudo=true;transl_table=11 PNGG01000005.1 Genbank gene 147427 147528 . + . ID=gene-CJ235_09840;Name=CJ235_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09840 PNGG01000005.1 Protein Homology CDS 147427 147528 . + 0 ID=cds-PMC18125.1;Parent=gene-CJ235_09840;Dbxref=NCBI_GP:PMC18125.1;Name=PMC18125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898541.1;locus_tag=CJ235_09840;product=DUF2648 domain-containing protein;protein_id=PMC18125.1;transl_table=11 PNGG01000005.1 Genbank gene 147760 147894 . + . ID=gene-CJ235_09845;Name=CJ235_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09845 PNGG01000005.1 Protein Homology CDS 147760 147894 . + 0 ID=cds-PMC18121.1;Parent=gene-CJ235_09845;Dbxref=NCBI_GP:PMC18121.1;Name=PMC18121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465837.1;locus_tag=CJ235_09845;product=beta-class phenol-soluble modulin;protein_id=PMC18121.1;transl_table=11 PNGG01000005.1 Genbank pseudogene 148020 148328 . + . ID=gene-CJ235_09850;Name=CJ235_09850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_09850;pseudo=true PNGG01000005.1 Protein Homology CDS 148020 148328 . + 0 ID=cds-CJ235_09850;Parent=gene-CJ235_09850;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1;locus_tag=CJ235_09850;product=IS6-like element IS257 family transposase;pseudo=true;transl_table=11 ##sequence-region PNGG01000006.1 1 115529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000006.1 Genbank region 1 115529 . + . ID=PNGG01000006.1:1..115529;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000006.1 Genbank gene 1 461 . - . ID=gene-CJ235_09855;Name=CJ235_09855;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_09855;partial=true;start_range=.,1 PNGG01000006.1 Genbank rRNA 1 461 . - . ID=rna-CJ235_09855;Parent=gene-CJ235_09855;gbkey=rRNA;locus_tag=CJ235_09855;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000006.1 Genbank exon 1 461 . - . ID=exon-CJ235_09855-1;Parent=rna-CJ235_09855;gbkey=rRNA;locus_tag=CJ235_09855;partial=true;product=16S ribosomal RNA;start_range=.,1 PNGG01000006.1 Genbank gene 1451 1903 . - . ID=gene-CJ235_09860;Name=CJ235_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09860 PNGG01000006.1 Protein Homology CDS 1451 1903 . - 0 ID=cds-PMC17666.1;Parent=gene-CJ235_09860;Dbxref=NCBI_GP:PMC17666.1;Name=PMC17666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452366.1;locus_tag=CJ235_09860;product=transcriptional repressor;protein_id=PMC17666.1;transl_table=11 PNGG01000006.1 Genbank gene 1999 2949 . - . ID=gene-CJ235_09865;Name=CJ235_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09865 PNGG01000006.1 Protein Homology CDS 1999 2949 . - 0 ID=cds-PMC17667.1;Parent=gene-CJ235_09865;Dbxref=NCBI_GP:PMC17667.1;Name=PMC17667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175210.1;locus_tag=CJ235_09865;product=hydroxyacid dehydrogenase;protein_id=PMC17667.1;transl_table=11 PNGG01000006.1 Genbank gene 2956 3411 . - . ID=gene-CJ235_09870;Name=CJ235_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09870 PNGG01000006.1 Protein Homology CDS 2956 3411 . - 0 ID=cds-PMC17668.1;Parent=gene-CJ235_09870;Dbxref=NCBI_GP:PMC17668.1;Name=PMC17668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500496.1;locus_tag=CJ235_09870;product=thioredoxin-dependent thiol peroxidase;protein_id=PMC17668.1;transl_table=11 PNGG01000006.1 Genbank gene 3492 4781 . + . ID=gene-CJ235_09875;Name=CJ235_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09875 PNGG01000006.1 Protein Homology CDS 3492 4781 . + 0 ID=cds-PMC17669.1;Parent=gene-CJ235_09875;Dbxref=NCBI_GP:PMC17669.1;Name=PMC17669.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=CJ235_09875;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=PMC17669.1;transl_table=11 PNGG01000006.1 Genbank gene 4860 5954 . + . ID=gene-CJ235_09880;Name=CJ235_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09880 PNGG01000006.1 Protein Homology CDS 4860 5954 . + 0 ID=cds-PMC17670.1;Parent=gene-CJ235_09880;Dbxref=NCBI_GP:PMC17670.1;Name=PMC17670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469635.1;locus_tag=CJ235_09880;product=aromatic acid exporter family protein;protein_id=PMC17670.1;transl_table=11 PNGG01000006.1 Genbank gene 6049 7785 . - . ID=gene-CJ235_09885;Name=CJ235_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09885 PNGG01000006.1 Protein Homology CDS 6049 7785 . - 0 ID=cds-PMC17671.1;Parent=gene-CJ235_09885;Dbxref=NCBI_GP:PMC17671.1;Name=PMC17671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765105.1;locus_tag=CJ235_09885;product=ABC transporter ATP-binding protein;protein_id=PMC17671.1;transl_table=11 PNGG01000006.1 Genbank gene 8154 8696 . - . ID=gene-CJ235_09890;Name=CJ235_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09890 PNGG01000006.1 Protein Homology CDS 8154 8696 . - 0 ID=cds-PMC17672.1;Parent=gene-CJ235_09890;Dbxref=NCBI_GP:PMC17672.1;Name=PMC17672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CJ235_09890;product=DUF402 domain-containing protein;protein_id=PMC17672.1;transl_table=11 PNGG01000006.1 Genbank gene 8765 9820 . - . ID=gene-CJ235_09895;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CJ235_09895 PNGG01000006.1 Protein Homology CDS 8765 9820 . - 0 ID=cds-PMC17673.1;Parent=gene-CJ235_09895;Dbxref=NCBI_GP:PMC17673.1;Name=PMC17673.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302793.1;locus_tag=CJ235_09895;product=A/G-specific adenine glycosylase;protein_id=PMC17673.1;transl_table=11 PNGG01000006.1 Genbank gene 9943 10920 . + . ID=gene-CJ235_09900;Name=CJ235_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09900 PNGG01000006.1 Protein Homology CDS 9943 10920 . + 0 ID=cds-PMC17674.1;Parent=gene-CJ235_09900;Dbxref=NCBI_GP:PMC17674.1;Name=PMC17674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473017.1;locus_tag=CJ235_09900;product=metal-dependent hydrolase;protein_id=PMC17674.1;transl_table=11 PNGG01000006.1 Genbank gene 10995 11996 . - . ID=gene-CJ235_09905;Name=CJ235_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09905 PNGG01000006.1 GeneMarkS+ CDS 10995 11996 . - 0 ID=cds-PMC17675.1;Parent=gene-CJ235_09905;Dbxref=NCBI_GP:PMC17675.1;Name=PMC17675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09905;product=hypothetical protein;protein_id=PMC17675.1;transl_table=11 PNGG01000006.1 Genbank gene 12006 13538 . - . ID=gene-CJ235_09910;Name=CJ235_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09910 PNGG01000006.1 Protein Homology CDS 12006 13538 . - 0 ID=cds-PMC17676.1;Parent=gene-CJ235_09910;Dbxref=NCBI_GP:PMC17676.1;Name=PMC17676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473016.1;locus_tag=CJ235_09910;product=teichoic acid ABC transporter ATP-binding protein;protein_id=PMC17676.1;transl_table=11 PNGG01000006.1 Genbank gene 13553 13867 . - . ID=gene-CJ235_09915;Name=CJ235_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09915 PNGG01000006.1 Protein Homology CDS 13553 13867 . - 0 ID=cds-PMC17677.1;Parent=gene-CJ235_09915;Dbxref=NCBI_GP:PMC17677.1;Name=PMC17677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509976.1;locus_tag=CJ235_09915;product=DUF1811 domain-containing protein;protein_id=PMC17677.1;transl_table=11 PNGG01000006.1 Genbank gene 13845 14663 . - . ID=gene-CJ235_09920;Name=CJ235_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09920 PNGG01000006.1 Protein Homology CDS 13845 14663 . - 0 ID=cds-PMC17678.1;Parent=gene-CJ235_09920;Dbxref=NCBI_GP:PMC17678.1;Name=PMC17678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473033.1;locus_tag=CJ235_09920;product=recombination regulator RecX;protein_id=PMC17678.1;transl_table=11 PNGG01000006.1 Genbank gene 14804 15613 . - . ID=gene-CJ235_09925;Name=CJ235_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09925 PNGG01000006.1 Protein Homology CDS 14804 15613 . - 0 ID=cds-PMC17679.1;Parent=gene-CJ235_09925;Dbxref=NCBI_GP:PMC17679.1;Name=PMC17679.1;Note=monofunctional%3B catalyzes the elongation of glycan strands in cell wall biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473027.1;locus_tag=CJ235_09925;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=PMC17679.1;transl_table=11 PNGG01000006.1 Genbank gene 15855 16373 . - . ID=gene-CJ235_09930;Name=CJ235_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09930 PNGG01000006.1 Protein Homology CDS 15855 16373 . - 0 ID=cds-PMC17680.1;Parent=gene-CJ235_09930;Dbxref=NCBI_GP:PMC17680.1;Name=PMC17680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450071.1;locus_tag=CJ235_09930;product=type 1 glutamine amidotransferase;protein_id=PMC17680.1;transl_table=11 PNGG01000006.1 Genbank gene 16505 16681 . - . ID=gene-CJ235_09935;Name=CJ235_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09935 PNGG01000006.1 Protein Homology CDS 16505 16681 . - 0 ID=cds-PMC17681.1;Parent=gene-CJ235_09935;Dbxref=NCBI_GP:PMC17681.1;Name=PMC17681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482854.1;locus_tag=CJ235_09935;product=hypothetical protein;protein_id=PMC17681.1;transl_table=11 PNGG01000006.1 Genbank gene 16971 18122 . + . ID=gene-CJ235_09940;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CJ235_09940 PNGG01000006.1 Protein Homology CDS 16971 18122 . + 0 ID=cds-PMC17682.1;Parent=gene-CJ235_09940;Dbxref=NCBI_GP:PMC17682.1;Name=PMC17682.1;gbkey=CDS;gene=yfkAB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509188.1;locus_tag=CJ235_09940;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=PMC17682.1;transl_table=11 PNGG01000006.1 Genbank gene 18257 18778 . - . ID=gene-CJ235_09945;Name=CJ235_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09945 PNGG01000006.1 Protein Homology CDS 18257 18778 . - 0 ID=cds-PMC17683.1;Parent=gene-CJ235_09945;Dbxref=NCBI_GP:PMC17683.1;Name=PMC17683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302785.1;locus_tag=CJ235_09945;product=acyl-CoA thioesterase;protein_id=PMC17683.1;transl_table=11 PNGG01000006.1 Genbank gene 18865 20106 . - . ID=gene-CJ235_09950;Name=CJ235_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09950 PNGG01000006.1 Protein Homology CDS 18865 20106 . - 0 ID=cds-PMC17684.1;Parent=gene-CJ235_09950;Dbxref=NCBI_GP:PMC17684.1;Name=PMC17684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472977.1;locus_tag=CJ235_09950;product=aminopeptidase;protein_id=PMC17684.1;transl_table=11 PNGG01000006.1 Genbank gene 20120 20320 . - . ID=gene-CJ235_09955;Name=CJ235_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09955 PNGG01000006.1 Protein Homology CDS 20120 20320 . - 0 ID=cds-PMC17685.1;Parent=gene-CJ235_09955;Dbxref=NCBI_GP:PMC17685.1;Name=PMC17685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452293.1;locus_tag=CJ235_09955;product=DUF1128 domain-containing protein;protein_id=PMC17685.1;transl_table=11 PNGG01000006.1 Genbank gene 20455 20919 . + . ID=gene-CJ235_09960;Name=CJ235_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09960 PNGG01000006.1 Protein Homology CDS 20455 20919 . + 0 ID=cds-PMC17686.1;Parent=gene-CJ235_09960;Dbxref=NCBI_GP:PMC17686.1;Name=PMC17686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302783.1;locus_tag=CJ235_09960;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=PMC17686.1;transl_table=11 PNGG01000006.1 Genbank gene 20924 21226 . + . ID=gene-CJ235_09965;Name=CJ235_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09965 PNGG01000006.1 Protein Homology CDS 20924 21226 . + 0 ID=cds-PMC17687.1;Parent=gene-CJ235_09965;Dbxref=NCBI_GP:PMC17687.1;Name=PMC17687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507208.1;locus_tag=CJ235_09965;product=hypothetical protein;protein_id=PMC17687.1;transl_table=11 PNGG01000006.1 Genbank pseudogene 21484 22479 . + . ID=gene-CJ235_09970;Name=CJ235_09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_09970;pseudo=true PNGG01000006.1 Protein Homology CDS 21484 22479 . + 0 ID=cds-CJ235_09970;Parent=gene-CJ235_09970;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469617.1;locus_tag=CJ235_09970;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000006.1 Genbank gene 22926 23495 . + . ID=gene-CJ235_09975;Name=CJ235_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09975 PNGG01000006.1 Protein Homology CDS 22926 23495 . + 0 ID=cds-PMC17688.1;Parent=gene-CJ235_09975;Dbxref=NCBI_GP:PMC17688.1;Name=PMC17688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016999031.1;locus_tag=CJ235_09975;product=carbonic anhydrase;protein_id=PMC17688.1;transl_table=11 PNGG01000006.1 Genbank gene 23588 24217 . - . ID=gene-CJ235_09980;Name=CJ235_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09980 PNGG01000006.1 Protein Homology CDS 23588 24217 . - 0 ID=cds-PMC17689.1;Parent=gene-CJ235_09980;Dbxref=NCBI_GP:PMC17689.1;Name=PMC17689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461333.1;locus_tag=CJ235_09980;product=DNA-binding response regulator;protein_id=PMC17689.1;transl_table=11 PNGG01000006.1 Genbank gene 24207 25250 . - . ID=gene-CJ235_09985;Name=CJ235_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09985 PNGG01000006.1 Protein Homology CDS 24207 25250 . - 0 ID=cds-PMC17690.1;Parent=gene-CJ235_09985;Dbxref=NCBI_GP:PMC17690.1;Name=PMC17690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500590.1;locus_tag=CJ235_09985;product=sensor histidine kinase;protein_id=PMC17690.1;transl_table=11 PNGG01000006.1 Genbank gene 25247 25948 . - . ID=gene-CJ235_09990;Name=CJ235_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09990 PNGG01000006.1 Protein Homology CDS 25247 25948 . - 0 ID=cds-PMC17691.1;Parent=gene-CJ235_09990;Dbxref=NCBI_GP:PMC17691.1;Name=PMC17691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765126.1;locus_tag=CJ235_09990;product=transporter;protein_id=PMC17691.1;transl_table=11 PNGG01000006.1 Genbank gene 26135 26530 . - . ID=gene-CJ235_09995;Name=CJ235_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_09995 PNGG01000006.1 GeneMarkS+ CDS 26135 26530 . - 0 ID=cds-PMC17692.1;Parent=gene-CJ235_09995;Dbxref=NCBI_GP:PMC17692.1;Name=PMC17692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_09995;product=hypothetical protein;protein_id=PMC17692.1;transl_table=11 PNGG01000006.1 Genbank gene 26691 27455 . - . ID=gene-CJ235_10000;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CJ235_10000 PNGG01000006.1 Protein Homology CDS 26691 27455 . - 0 ID=cds-PMC17773.1;Parent=gene-CJ235_10000;Dbxref=NCBI_GP:PMC17773.1;Name=PMC17773.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472950.1;locus_tag=CJ235_10000;product=type I methionyl aminopeptidase;protein_id=PMC17773.1;transl_table=11 PNGG01000006.1 Genbank gene 27612 28601 . + . ID=gene-CJ235_10005;Name=CJ235_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10005 PNGG01000006.1 Protein Homology CDS 27612 28601 . + 0 ID=cds-PMC17693.1;Parent=gene-CJ235_10005;Dbxref=NCBI_GP:PMC17693.1;Name=PMC17693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472975.1;locus_tag=CJ235_10005;product=aromatic acid exporter family protein;protein_id=PMC17693.1;transl_table=11 PNGG01000006.1 Genbank gene 28721 29443 . - . ID=gene-CJ235_10010;Name=CJ235_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10010 PNGG01000006.1 Protein Homology CDS 28721 29443 . - 0 ID=cds-PMC17694.1;Parent=gene-CJ235_10010;Dbxref=NCBI_GP:PMC17694.1;Name=PMC17694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461344.1;locus_tag=CJ235_10010;product=glutamine amidotransferase;protein_id=PMC17694.1;transl_table=11 PNGG01000006.1 Genbank gene 29440 30756 . - . ID=gene-CJ235_10015;Name=CJ235_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10015 PNGG01000006.1 Protein Homology CDS 29440 30756 . - 0 ID=cds-PMC17695.1;Parent=gene-CJ235_10015;Dbxref=NCBI_GP:PMC17695.1;Name=PMC17695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472953.1;locus_tag=CJ235_10015;product=DUF1727 domain-containing protein;protein_id=PMC17695.1;transl_table=11 PNGG01000006.1 Genbank gene 30924 31424 . + . ID=gene-CJ235_10020;Name=CJ235_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10020 PNGG01000006.1 Protein Homology CDS 30924 31424 . + 0 ID=cds-PMC17696.1;Parent=gene-CJ235_10020;Dbxref=NCBI_GP:PMC17696.1;Name=PMC17696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445463.1;locus_tag=CJ235_10020;product=H-type ferritin FtnA;protein_id=PMC17696.1;transl_table=11 PNGG01000006.1 Genbank gene 31704 32318 . + . ID=gene-CJ235_10025;Name=CJ235_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10025 PNGG01000006.1 Protein Homology CDS 31704 32318 . + 0 ID=cds-PMC17697.1;Parent=gene-CJ235_10025;Dbxref=NCBI_GP:PMC17697.1;Name=PMC17697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302772.1;locus_tag=CJ235_10025;product=DNA polymerase III subunit epsilon;protein_id=PMC17697.1;transl_table=11 PNGG01000006.1 Genbank gene 32346 33416 . - . ID=gene-CJ235_10030;Name=CJ235_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10030 PNGG01000006.1 Protein Homology CDS 32346 33416 . - 0 ID=cds-PMC17698.1;Parent=gene-CJ235_10030;Dbxref=NCBI_GP:PMC17698.1;Name=PMC17698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765135.1;locus_tag=CJ235_10030;product=DNA polymerase IV;protein_id=PMC17698.1;transl_table=11 PNGG01000006.1 Genbank gene 33575 34108 . - . ID=gene-CJ235_10035;Name=CJ235_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10035 PNGG01000006.1 Protein Homology CDS 33575 34108 . - 0 ID=cds-PMC17699.1;Parent=gene-CJ235_10035;Dbxref=NCBI_GP:PMC17699.1;Name=PMC17699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507195.1;locus_tag=CJ235_10035;product=DUF3267 domain-containing protein;protein_id=PMC17699.1;transl_table=11 PNGG01000006.1 Genbank gene 34209 35573 . - . ID=gene-CJ235_10040;Name=CJ235_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10040 PNGG01000006.1 Protein Homology CDS 34209 35573 . - 0 ID=cds-PMC17700.1;Parent=gene-CJ235_10040;Dbxref=NCBI_GP:PMC17700.1;Name=PMC17700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472974.1;locus_tag=CJ235_10040;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=PMC17700.1;transl_table=11 PNGG01000006.1 Genbank gene 35746 36663 . - . ID=gene-CJ235_10045;Name=CJ235_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10045 PNGG01000006.1 Protein Homology CDS 35746 36663 . - 0 ID=cds-PMC17701.1;Parent=gene-CJ235_10045;Dbxref=NCBI_GP:PMC17701.1;Name=PMC17701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472990.1;locus_tag=CJ235_10045;product=diacylglycerol kinase;protein_id=PMC17701.1;transl_table=11 PNGG01000006.1 Genbank gene 36892 38319 . - . ID=gene-CJ235_10050;Name=CJ235_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10050 PNGG01000006.1 Protein Homology CDS 36892 38319 . - 0 ID=cds-PMC17702.1;Parent=gene-CJ235_10050;Dbxref=NCBI_GP:PMC17702.1;Name=PMC17702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453613.1;locus_tag=CJ235_10050;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=PMC17702.1;transl_table=11 PNGG01000006.1 Genbank gene 38331 39788 . - . ID=gene-CJ235_10055;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CJ235_10055 PNGG01000006.1 Protein Homology CDS 38331 39788 . - 0 ID=cds-PMC17703.1;Parent=gene-CJ235_10055;Dbxref=NCBI_GP:PMC17703.1;Name=PMC17703.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001665984.1;locus_tag=CJ235_10055;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=PMC17703.1;transl_table=11 PNGG01000006.1 Genbank gene 39790 40092 . - . ID=gene-CJ235_10060;Name=CJ235_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10060 PNGG01000006.1 Protein Homology CDS 39790 40092 . - 0 ID=cds-PMC17704.1;Parent=gene-CJ235_10060;Dbxref=NCBI_GP:PMC17704.1;Name=PMC17704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765141.1;locus_tag=CJ235_10060;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=PMC17704.1;transl_table=11 PNGG01000006.1 Genbank gene 40332 42290 . - . ID=gene-CJ235_10065;Name=CJ235_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10065 PNGG01000006.1 Protein Homology CDS 40332 42290 . - 0 ID=cds-PMC17705.1;Parent=gene-CJ235_10065;Dbxref=NCBI_GP:PMC17705.1;Name=PMC17705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02687.19;locus_tag=CJ235_10065;product=ABC transporter permease;protein_id=PMC17705.1;transl_table=11 PNGG01000006.1 Genbank gene 42294 43043 . - . ID=gene-CJ235_10070;Name=CJ235_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10070 PNGG01000006.1 Protein Homology CDS 42294 43043 . - 0 ID=cds-PMC17706.1;Parent=gene-CJ235_10070;Dbxref=NCBI_GP:PMC17706.1;Name=PMC17706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472959.1;locus_tag=CJ235_10070;product=ABC transporter ATP-binding protein;protein_id=PMC17706.1;transl_table=11 PNGG01000006.1 Genbank gene 43230 44444 . - . ID=gene-CJ235_10075;Name=CJ235_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10075 PNGG01000006.1 Protein Homology CDS 43230 44444 . - 0 ID=cds-PMC17707.1;Parent=gene-CJ235_10075;Dbxref=NCBI_GP:PMC17707.1;Name=PMC17707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302765.1;locus_tag=CJ235_10075;product=hypothetical protein;protein_id=PMC17707.1;transl_table=11 PNGG01000006.1 Genbank gene 44457 46460 . - . ID=gene-CJ235_10080;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CJ235_10080 PNGG01000006.1 Protein Homology CDS 44457 46460 . - 0 ID=cds-PMC17708.1;Parent=gene-CJ235_10080;Dbxref=NCBI_GP:PMC17708.1;Name=PMC17708.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302764.1;locus_tag=CJ235_10080;product=NAD-dependent DNA ligase LigA;protein_id=PMC17708.1;transl_table=11 PNGG01000006.1 Genbank gene 46464 48668 . - . ID=gene-CJ235_10085;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=CJ235_10085 PNGG01000006.1 Protein Homology CDS 46464 48668 . - 0 ID=cds-PMC17709.1;Parent=gene-CJ235_10085;Dbxref=NCBI_GP:PMC17709.1;Name=PMC17709.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765145.1;locus_tag=CJ235_10085;product=DNA helicase PcrA;protein_id=PMC17709.1;transl_table=11 PNGG01000006.1 Genbank gene 48665 49360 . - . ID=gene-CJ235_10090;Name=CJ235_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10090 PNGG01000006.1 Protein Homology CDS 48665 49360 . - 0 ID=cds-PMC17710.1;Parent=gene-CJ235_10090;Dbxref=NCBI_GP:PMC17710.1;Name=PMC17710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472943.1;locus_tag=CJ235_10090;product=heptaprenylglyceryl phosphate synthase;protein_id=PMC17710.1;transl_table=11 PNGG01000006.1 Genbank gene 49489 49791 . - . ID=gene-CJ235_10095;Name=CJ235_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10095 PNGG01000006.1 Protein Homology CDS 49489 49791 . - 0 ID=cds-PMC17711.1;Parent=gene-CJ235_10095;Dbxref=NCBI_GP:PMC17711.1;Name=PMC17711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=CJ235_10095;product=hypothetical protein;protein_id=PMC17711.1;transl_table=11 PNGG01000006.1 Genbank gene 49895 51190 . - . ID=gene-CJ235_10100;Name=CJ235_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10100 PNGG01000006.1 Protein Homology CDS 49895 51190 . - 0 ID=cds-PMC17712.1;Parent=gene-CJ235_10100;Dbxref=NCBI_GP:PMC17712.1;Name=PMC17712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488049.1;locus_tag=CJ235_10100;product=adenylosuccinate lyase;protein_id=PMC17712.1;transl_table=11 PNGG01000006.1 Genbank gene 51555 51743 . - . ID=gene-CJ235_10105;Name=CJ235_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10105 PNGG01000006.1 Protein Homology CDS 51555 51743 . - 0 ID=cds-PMC17713.1;Parent=gene-CJ235_10105;Dbxref=NCBI_GP:PMC17713.1;Name=PMC17713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482819.1;locus_tag=CJ235_10105;product=NETI motif-containing protein;protein_id=PMC17713.1;transl_table=11 PNGG01000006.1 Genbank gene 51709 52320 . - . ID=gene-CJ235_10110;Name=CJ235_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10110 PNGG01000006.1 Protein Homology CDS 51709 52320 . - 0 ID=cds-PMC17714.1;Parent=gene-CJ235_10110;Dbxref=NCBI_GP:PMC17714.1;Name=PMC17714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472967.1;locus_tag=CJ235_10110;product=DUF2179 domain-containing protein;protein_id=PMC17714.1;transl_table=11 PNGG01000006.1 Genbank gene 52411 53232 . - . ID=gene-CJ235_10115;Name=CJ235_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10115 PNGG01000006.1 Protein Homology CDS 52411 53232 . - 0 ID=cds-PMC17715.1;Parent=gene-CJ235_10115;Dbxref=NCBI_GP:PMC17715.1;Name=PMC17715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275346.1;locus_tag=CJ235_10115;product=ammonia-dependent NAD(+) synthetase;protein_id=PMC17715.1;transl_table=11 PNGG01000006.1 Genbank gene 53225 54694 . - . ID=gene-CJ235_10120;Name=CJ235_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10120 PNGG01000006.1 Protein Homology CDS 53225 54694 . - 0 ID=cds-PMC17716.1;Parent=gene-CJ235_10120;Dbxref=NCBI_GP:PMC17716.1;Name=PMC17716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=CJ235_10120;product=nicotinate phosphoribosyltransferase;protein_id=PMC17716.1;transl_table=11 PNGG01000006.1 Genbank gene 54867 55934 . + . ID=gene-CJ235_10125;Name=CJ235_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10125 PNGG01000006.1 Protein Homology CDS 54867 55934 . + 0 ID=cds-PMC17717.1;Parent=gene-CJ235_10125;Dbxref=NCBI_GP:PMC17717.1;Name=PMC17717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472946.1;locus_tag=CJ235_10125;product=nitric oxide synthase;protein_id=PMC17717.1;transl_table=11 PNGG01000006.1 Genbank gene 56018 57106 . - . ID=gene-CJ235_10130;Name=CJ235_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10130 PNGG01000006.1 Protein Homology CDS 56018 57106 . - 0 ID=cds-PMC17718.1;Parent=gene-CJ235_10130;Dbxref=NCBI_GP:PMC17718.1;Name=PMC17718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472971.1;locus_tag=CJ235_10130;product=pectate lyase;protein_id=PMC17718.1;transl_table=11 PNGG01000006.1 Genbank gene 57293 57847 . + . ID=gene-CJ235_10135;Name=CJ235_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10135 PNGG01000006.1 Protein Homology CDS 57293 57847 . + 0 ID=cds-PMC17719.1;Parent=gene-CJ235_10135;Dbxref=NCBI_GP:PMC17719.1;Name=PMC17719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472979.1;locus_tag=CJ235_10135;product=cysteine hydrolase;protein_id=PMC17719.1;transl_table=11 PNGG01000006.1 Genbank gene 57908 58834 . + . ID=gene-CJ235_10140;Name=CJ235_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10140 PNGG01000006.1 Protein Homology CDS 57908 58834 . + 0 ID=cds-PMC17720.1;Parent=gene-CJ235_10140;Dbxref=NCBI_GP:PMC17720.1;Name=PMC17720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445415.1;locus_tag=CJ235_10140;product=manganese-dependent inorganic pyrophosphatase;protein_id=PMC17720.1;transl_table=11 PNGG01000006.1 Genbank gene 59120 60499 . + . ID=gene-CJ235_10145;Name=CJ235_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10145 PNGG01000006.1 Protein Homology CDS 59120 60499 . + 0 ID=cds-PMC17721.1;Parent=gene-CJ235_10145;Dbxref=NCBI_GP:PMC17721.1;Name=PMC17721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472976.1;locus_tag=CJ235_10145;product=aldehyde dehydrogenase;protein_id=PMC17721.1;transl_table=11 PNGG01000006.1 Genbank gene 60649 61686 . - . ID=gene-CJ235_10150;Name=CJ235_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10150 PNGG01000006.1 Protein Homology CDS 60649 61686 . - 0 ID=cds-PMC17722.1;Parent=gene-CJ235_10150;Dbxref=NCBI_GP:PMC17722.1;Name=PMC17722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472962.1;locus_tag=CJ235_10150;product=hypothetical protein;protein_id=PMC17722.1;transl_table=11 PNGG01000006.1 Genbank gene 61902 62351 . + . ID=gene-CJ235_10155;Name=CJ235_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10155 PNGG01000006.1 Protein Homology CDS 61902 62351 . + 0 ID=cds-PMC17723.1;Parent=gene-CJ235_10155;Dbxref=NCBI_GP:PMC17723.1;Name=PMC17723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472945.1;locus_tag=CJ235_10155;product=YolD-like family protein;protein_id=PMC17723.1;transl_table=11 PNGG01000006.1 Genbank gene 62402 62572 . - . ID=gene-CJ235_10160;Name=CJ235_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10160 PNGG01000006.1 Protein Homology CDS 62402 62572 . - 0 ID=cds-PMC17724.1;Parent=gene-CJ235_10160;Dbxref=NCBI_GP:PMC17724.1;Name=PMC17724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469577.1;locus_tag=CJ235_10160;product=hypothetical protein;protein_id=PMC17724.1;transl_table=11 PNGG01000006.1 Genbank gene 62988 64028 . + . ID=gene-CJ235_10165;Name=CJ235_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10165 PNGG01000006.1 Protein Homology CDS 62988 64028 . + 0 ID=cds-PMC17725.1;Parent=gene-CJ235_10165;Dbxref=NCBI_GP:PMC17725.1;Name=PMC17725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477931.1;locus_tag=CJ235_10165;product=acyl-CoA--6-aminopenicillanic acid acyltransferase;protein_id=PMC17725.1;transl_table=11 PNGG01000006.1 Genbank gene 64089 64946 . - . ID=gene-CJ235_10170;Name=CJ235_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10170 PNGG01000006.1 Protein Homology CDS 64089 64946 . - 0 ID=cds-PMC17726.1;Parent=gene-CJ235_10170;Dbxref=NCBI_GP:PMC17726.1;Name=PMC17726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13349.4;locus_tag=CJ235_10170;product=hypothetical protein;protein_id=PMC17726.1;transl_table=11 PNGG01000006.1 Genbank gene 64943 65503 . - . ID=gene-CJ235_10175;Name=CJ235_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10175 PNGG01000006.1 Protein Homology CDS 64943 65503 . - 0 ID=cds-PMC17727.1;Parent=gene-CJ235_10175;Dbxref=NCBI_GP:PMC17727.1;Name=PMC17727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509138.1;locus_tag=CJ235_10175;product=DUF1700 domain-containing protein;protein_id=PMC17727.1;transl_table=11 PNGG01000006.1 Genbank gene 65697 66425 . - . ID=gene-CJ235_10180;Name=CJ235_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10180 PNGG01000006.1 Protein Homology CDS 65697 66425 . - 0 ID=cds-PMC17728.1;Parent=gene-CJ235_10180;Dbxref=NCBI_GP:PMC17728.1;Name=PMC17728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471737.1;locus_tag=CJ235_10180;product=hypothetical protein;protein_id=PMC17728.1;transl_table=11 PNGG01000006.1 Genbank gene 66425 67297 . - . ID=gene-CJ235_10185;Name=CJ235_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10185 PNGG01000006.1 Protein Homology CDS 66425 67297 . - 0 ID=cds-PMC17729.1;Parent=gene-CJ235_10185;Dbxref=NCBI_GP:PMC17729.1;Name=PMC17729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765177.1;locus_tag=CJ235_10185;product=ABC transporter ATP-binding protein;protein_id=PMC17729.1;transl_table=11 PNGG01000006.1 Genbank gene 67310 67972 . - . ID=gene-CJ235_10190;Name=CJ235_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10190 PNGG01000006.1 Protein Homology CDS 67310 67972 . - 0 ID=cds-PMC17730.1;Parent=gene-CJ235_10190;Dbxref=NCBI_GP:PMC17730.1;Name=PMC17730.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13346.4;locus_tag=CJ235_10190;product=hypothetical protein;protein_id=PMC17730.1;transl_table=11 PNGG01000006.1 Genbank gene 67993 68676 . - . ID=gene-CJ235_10195;Name=CJ235_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10195 PNGG01000006.1 GeneMarkS+ CDS 67993 68676 . - 0 ID=cds-PMC17731.1;Parent=gene-CJ235_10195;Dbxref=NCBI_GP:PMC17731.1;Name=PMC17731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10195;product=hypothetical protein;protein_id=PMC17731.1;transl_table=11 PNGG01000006.1 Genbank gene 68673 69581 . - . ID=gene-CJ235_10200;Name=CJ235_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10200 PNGG01000006.1 Protein Homology CDS 68673 69581 . - 0 ID=cds-PMC17732.1;Parent=gene-CJ235_10200;Dbxref=NCBI_GP:PMC17732.1;Name=PMC17732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471747.1;locus_tag=CJ235_10200;product=sodium ABC transporter ATP-binding protein;protein_id=PMC17732.1;transl_table=11 PNGG01000006.1 Genbank gene 69578 69955 . - . ID=gene-CJ235_10205;Name=CJ235_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10205 PNGG01000006.1 Protein Homology CDS 69578 69955 . - 0 ID=cds-PMC17733.1;Parent=gene-CJ235_10205;Dbxref=NCBI_GP:PMC17733.1;Name=PMC17733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765180.1;locus_tag=CJ235_10205;product=GntR family transcriptional regulator;protein_id=PMC17733.1;transl_table=11 PNGG01000006.1 Genbank gene 70243 70464 . - . ID=gene-CJ235_10210;Name=CJ235_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10210 PNGG01000006.1 Protein Homology CDS 70243 70464 . - 0 ID=cds-PMC17734.1;Parent=gene-CJ235_10210;Dbxref=NCBI_GP:PMC17734.1;Name=PMC17734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471740.1;locus_tag=CJ235_10210;product=hypothetical protein;protein_id=PMC17734.1;transl_table=11 PNGG01000006.1 Genbank gene 71020 72306 . + . ID=gene-CJ235_10215;Name=CJ235_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10215 PNGG01000006.1 Protein Homology CDS 71020 72306 . + 0 ID=cds-PMC17735.1;Parent=gene-CJ235_10215;Dbxref=NCBI_GP:PMC17735.1;Name=PMC17735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275324.1;locus_tag=CJ235_10215;product=aspartate aminotransferase;protein_id=PMC17735.1;transl_table=11 PNGG01000006.1 Genbank gene 72375 72839 . - . ID=gene-CJ235_10220;Name=CJ235_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10220 PNGG01000006.1 Protein Homology CDS 72375 72839 . - 0 ID=cds-PMC17736.1;Parent=gene-CJ235_10220;Dbxref=NCBI_GP:PMC17736.1;Name=PMC17736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471751.1;locus_tag=CJ235_10220;product=damage-inducible protein DinB;protein_id=PMC17736.1;transl_table=11 PNGG01000006.1 Genbank gene 73033 73569 . + . ID=gene-CJ235_10225;Name=CJ235_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10225 PNGG01000006.1 Protein Homology CDS 73033 73569 . + 0 ID=cds-PMC17737.1;Parent=gene-CJ235_10225;Dbxref=NCBI_GP:PMC17737.1;Name=PMC17737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900761.1;locus_tag=CJ235_10225;product=hypothetical protein;protein_id=PMC17737.1;transl_table=11 PNGG01000006.1 Genbank pseudogene 73651 74041 . - . ID=gene-CJ235_10230;Name=CJ235_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_10230;pseudo=true PNGG01000006.1 Protein Homology CDS 73651 74041 . - 0 ID=cds-CJ235_10230;Parent=gene-CJ235_10230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500431.1;locus_tag=CJ235_10230;product=hypothetical protein;pseudo=true;transl_table=11 PNGG01000006.1 Genbank gene 74481 76106 . - . ID=gene-CJ235_10235;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CJ235_10235 PNGG01000006.1 Protein Homology CDS 74481 76106 . - 0 ID=cds-PMC17738.1;Parent=gene-CJ235_10235;Dbxref=NCBI_GP:PMC17738.1;Name=PMC17738.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464903.1;locus_tag=CJ235_10235;product=chaperonin GroEL;protein_id=PMC17738.1;transl_table=11 PNGG01000006.1 Genbank gene 76134 76418 . - . ID=gene-CJ235_10240;Name=CJ235_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10240 PNGG01000006.1 Protein Homology CDS 76134 76418 . - 0 ID=cds-PMC17739.1;Parent=gene-CJ235_10240;Dbxref=NCBI_GP:PMC17739.1;Name=PMC17739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500737.1;locus_tag=CJ235_10240;product=co-chaperone GroES;protein_id=PMC17739.1;transl_table=11 PNGG01000006.1 Genbank gene 76589 77329 . + . ID=gene-CJ235_10245;Name=CJ235_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10245 PNGG01000006.1 Protein Homology CDS 76589 77329 . + 0 ID=cds-PMC17740.1;Parent=gene-CJ235_10245;Dbxref=NCBI_GP:PMC17740.1;Name=PMC17740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507146.1;locus_tag=CJ235_10245;product=CPBP family intramembrane metalloprotease;protein_id=PMC17740.1;transl_table=11 PNGG01000006.1 Genbank gene 77385 79742 . - . ID=gene-CJ235_10250;Name=CJ235_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10250 PNGG01000006.1 GeneMarkS+ CDS 77385 79742 . - 0 ID=cds-PMC17741.1;Parent=gene-CJ235_10250;Dbxref=NCBI_GP:PMC17741.1;Name=PMC17741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10250;product=hypothetical protein;protein_id=PMC17741.1;transl_table=11 PNGG01000006.1 Genbank gene 79958 80743 . + . ID=gene-CJ235_10255;Name=CJ235_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10255 PNGG01000006.1 Protein Homology CDS 79958 80743 . + 0 ID=cds-PMC17742.1;Parent=gene-CJ235_10255;Dbxref=NCBI_GP:PMC17742.1;Name=PMC17742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175276.1;locus_tag=CJ235_10255;product=carbon-nitrogen family hydrolase;protein_id=PMC17742.1;transl_table=11 PNGG01000006.1 Genbank gene 81503 82078 . + . ID=gene-CJ235_10260;Name=CJ235_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10260 PNGG01000006.1 Protein Homology CDS 81503 82078 . + 0 ID=cds-PMC17743.1;Parent=gene-CJ235_10260;Dbxref=NCBI_GP:PMC17743.1;Name=PMC17743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302729.1;locus_tag=CJ235_10260;product=accessory gene regulator ArgB-like protein;protein_id=PMC17743.1;transl_table=11 PNGG01000006.1 Genbank gene 82075 82212 . + . ID=gene-CJ235_10265;Name=CJ235_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10265 PNGG01000006.1 Protein Homology CDS 82075 82212 . + 0 ID=cds-PMC17744.1;Parent=gene-CJ235_10265;Dbxref=NCBI_GP:PMC17744.1;Name=PMC17744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507141.1;locus_tag=CJ235_10265;product=cyclic lactone autoinducer peptide;protein_id=PMC17744.1;transl_table=11 PNGG01000006.1 Genbank gene 82239 83531 . + . ID=gene-CJ235_10270;Name=CJ235_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10270 PNGG01000006.1 Protein Homology CDS 82239 83531 . + 0 ID=cds-PMC17745.1;Parent=gene-CJ235_10270;Dbxref=NCBI_GP:PMC17745.1;Name=PMC17745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455089.1;locus_tag=CJ235_10270;product=ATP-binding protein;protein_id=PMC17745.1;transl_table=11 PNGG01000006.1 Genbank gene 83546 84262 . + . ID=gene-CJ235_10275;Name=CJ235_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10275 PNGG01000006.1 Protein Homology CDS 83546 84262 . + 0 ID=cds-PMC17746.1;Parent=gene-CJ235_10275;Dbxref=NCBI_GP:PMC17746.1;Name=PMC17746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CJ235_10275;product=DNA-binding response regulator;protein_id=PMC17746.1;transl_table=11 PNGG01000006.1 Genbank gene 84323 85294 . - . ID=gene-CJ235_10280;Name=CJ235_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10280 PNGG01000006.1 Protein Homology CDS 84323 85294 . - 0 ID=cds-PMC17747.1;Parent=gene-CJ235_10280;Dbxref=NCBI_GP:PMC17747.1;Name=PMC17747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471764.1;locus_tag=CJ235_10280;product=carbohydrate kinase;protein_id=PMC17747.1;transl_table=11 PNGG01000006.1 Genbank gene 85294 86775 . - . ID=gene-CJ235_10285;Name=CJ235_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10285 PNGG01000006.1 Protein Homology CDS 85294 86775 . - 0 ID=cds-PMC17748.1;Parent=gene-CJ235_10285;Dbxref=NCBI_GP:PMC17748.1;Name=PMC17748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471754.1;locus_tag=CJ235_10285;product=sucrose-6-phosphate hydrolase;protein_id=PMC17748.1;transl_table=11 PNGG01000006.1 Genbank gene 86859 87875 . - . ID=gene-CJ235_10290;Name=CJ235_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10290 PNGG01000006.1 Protein Homology CDS 86859 87875 . - 0 ID=cds-PMC17749.1;Parent=gene-CJ235_10290;Dbxref=NCBI_GP:PMC17749.1;Name=PMC17749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471756.1;locus_tag=CJ235_10290;product=LacI family transcriptional regulator;protein_id=PMC17749.1;transl_table=11 PNGG01000006.1 Genbank gene 88071 89348 . + . ID=gene-CJ235_10295;Name=CJ235_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10295 PNGG01000006.1 Protein Homology CDS 88071 89348 . + 0 ID=cds-PMC17750.1;Parent=gene-CJ235_10295;Dbxref=NCBI_GP:PMC17750.1;Name=PMC17750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479222.1;locus_tag=CJ235_10295;product=MFS transporter;protein_id=PMC17750.1;transl_table=11 PNGG01000006.1 Genbank gene 89368 90783 . + . ID=gene-CJ235_10300;Name=CJ235_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10300 PNGG01000006.1 Protein Homology CDS 89368 90783 . + 0 ID=cds-PMC17751.1;Parent=gene-CJ235_10300;Dbxref=NCBI_GP:PMC17751.1;Name=PMC17751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479221.1;locus_tag=CJ235_10300;product=sucrose-6-phosphate hydrolase;protein_id=PMC17751.1;transl_table=11 PNGG01000006.1 Genbank gene 90929 91906 . + . ID=gene-CJ235_10305;Name=CJ235_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10305 PNGG01000006.1 Protein Homology CDS 90929 91906 . + 0 ID=cds-PMC17752.1;Parent=gene-CJ235_10305;Dbxref=NCBI_GP:PMC17752.1;Name=PMC17752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461073.1;locus_tag=CJ235_10305;product=LacI family transcriptional regulator;protein_id=PMC17752.1;transl_table=11 PNGG01000006.1 Genbank gene 92049 92273 . - . ID=gene-CJ235_10310;Name=CJ235_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10310 PNGG01000006.1 Protein Homology CDS 92049 92273 . - 0 ID=cds-PMC17753.1;Parent=gene-CJ235_10310;Dbxref=NCBI_GP:PMC17753.1;Name=PMC17753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469551.1;locus_tag=CJ235_10310;product=oxidoreductase;protein_id=PMC17753.1;transl_table=11 PNGG01000006.1 Genbank gene 92292 93389 . - . ID=gene-CJ235_10315;Name=CJ235_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10315 PNGG01000006.1 Protein Homology CDS 92292 93389 . - 0 ID=cds-PMC17754.1;Parent=gene-CJ235_10315;Dbxref=NCBI_GP:PMC17754.1;Name=PMC17754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448280.1;locus_tag=CJ235_10315;product=YeeE/YedE family protein;protein_id=PMC17754.1;transl_table=11 PNGG01000006.1 Genbank gene 93668 94603 . - . ID=gene-CJ235_10320;Name=CJ235_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10320 PNGG01000006.1 Protein Homology CDS 93668 94603 . - 0 ID=cds-PMC17755.1;Parent=gene-CJ235_10320;Dbxref=NCBI_GP:PMC17755.1;Name=PMC17755.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13240.4;locus_tag=CJ235_10320;product=zinc ribbon domain-containing protein;protein_id=PMC17755.1;transl_table=11 PNGG01000006.1 Genbank gene 94723 95361 . - . ID=gene-CJ235_10325;Name=CJ235_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10325 PNGG01000006.1 Protein Homology CDS 94723 95361 . - 0 ID=cds-PMC17756.1;Parent=gene-CJ235_10325;Dbxref=NCBI_GP:PMC17756.1;Name=PMC17756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469549.1;locus_tag=CJ235_10325;product=redox-sensing transcriptional repressor Rex;protein_id=PMC17756.1;transl_table=11 PNGG01000006.1 Genbank gene 95859 97793 . + . ID=gene-CJ235_10330;Name=CJ235_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10330 PNGG01000006.1 Protein Homology CDS 95859 97793 . + 0 ID=cds-PMC17757.1;Parent=gene-CJ235_10330;Dbxref=NCBI_GP:PMC17757.1;Name=PMC17757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471759.1;locus_tag=CJ235_10330;product=ABC transporter ATP-binding protein;protein_id=PMC17757.1;transl_table=11 PNGG01000006.1 Genbank gene 98159 99793 . + . ID=gene-CJ235_10335;Name=CJ235_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10335 PNGG01000006.1 Protein Homology CDS 98159 99793 . + 0 ID=cds-PMC17758.1;Parent=gene-CJ235_10335;Dbxref=NCBI_GP:PMC17758.1;Name=PMC17758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930539.1;locus_tag=CJ235_10335;product=DNA mismatch repair protein MutS;protein_id=PMC17758.1;transl_table=11 PNGG01000006.1 Genbank gene 100114 100536 . - . ID=gene-CJ235_10340;Name=CJ235_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10340 PNGG01000006.1 Protein Homology CDS 100114 100536 . - 0 ID=cds-PMC17759.1;Parent=gene-CJ235_10340;Dbxref=NCBI_GP:PMC17759.1;Name=PMC17759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507130.1;locus_tag=CJ235_10340;product=phosphoglucosamine mutase;protein_id=PMC17759.1;transl_table=11 PNGG01000006.1 Genbank gene 100612 101634 . - . ID=gene-CJ235_10345;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CJ235_10345 PNGG01000006.1 Protein Homology CDS 100612 101634 . - 0 ID=cds-PMC17760.1;Parent=gene-CJ235_10345;Dbxref=NCBI_GP:PMC17760.1;Name=PMC17760.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472688.1;locus_tag=CJ235_10345;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=PMC17760.1;transl_table=11 PNGG01000006.1 Genbank gene 101627 102091 . - . ID=gene-CJ235_10350;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CJ235_10350 PNGG01000006.1 Protein Homology CDS 101627 102091 . - 0 ID=cds-PMC17761.1;Parent=gene-CJ235_10350;Dbxref=NCBI_GP:PMC17761.1;Name=PMC17761.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017723420.1;locus_tag=CJ235_10350;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=PMC17761.1;transl_table=11 PNGG01000006.1 Genbank gene 102064 102729 . - . ID=gene-CJ235_10355;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CJ235_10355 PNGG01000006.1 Protein Homology CDS 102064 102729 . - 0 ID=cds-PMC17762.1;Parent=gene-CJ235_10355;Dbxref=NCBI_GP:PMC17762.1;Name=PMC17762.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472698.1;locus_tag=CJ235_10355;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=PMC17762.1;transl_table=11 PNGG01000006.1 Genbank gene 102710 103171 . - . ID=gene-CJ235_10360;Name=CJ235_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10360 PNGG01000006.1 Protein Homology CDS 102710 103171 . - 0 ID=cds-PMC17763.1;Parent=gene-CJ235_10360;Dbxref=NCBI_GP:PMC17763.1;Name=PMC17763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275289.1;locus_tag=CJ235_10360;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=PMC17763.1;transl_table=11 PNGG01000006.1 Genbank gene 103651 105339 . + . ID=gene-CJ235_10365;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CJ235_10365 PNGG01000006.1 Protein Homology CDS 103651 105339 . + 0 ID=cds-PMC17764.1;Parent=gene-CJ235_10365;Dbxref=NCBI_GP:PMC17764.1;Name=PMC17764.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765209.1;locus_tag=CJ235_10365;product=dihydroxy-acid dehydratase;protein_id=PMC17764.1;transl_table=11 PNGG01000006.1 Genbank gene 105353 107137 . + . ID=gene-CJ235_10370;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CJ235_10370 PNGG01000006.1 Protein Homology CDS 105353 107137 . + 0 ID=cds-PMC17765.1;Parent=gene-CJ235_10370;Dbxref=NCBI_GP:PMC17765.1;Name=PMC17765.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469540.1;locus_tag=CJ235_10370;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=PMC17765.1;transl_table=11 PNGG01000006.1 Genbank gene 107134 107607 . + . ID=gene-CJ235_10375;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CJ235_10375 PNGG01000006.1 Protein Homology CDS 107134 107607 . + 0 ID=cds-PMC17766.1;Parent=gene-CJ235_10375;Dbxref=NCBI_GP:PMC17766.1;Name=PMC17766.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507123.1;locus_tag=CJ235_10375;product=acetolactate synthase small subunit;protein_id=PMC17766.1;transl_table=11 PNGG01000006.1 Genbank gene 107662 108669 . + . ID=gene-CJ235_10380;Name=CJ235_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10380 PNGG01000006.1 Protein Homology CDS 107662 108669 . + 0 ID=cds-PMC17767.1;Parent=gene-CJ235_10380;Dbxref=NCBI_GP:PMC17767.1;Name=PMC17767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472696.1;locus_tag=CJ235_10380;product=ketol-acid reductoisomerase;protein_id=PMC17767.1;transl_table=11 PNGG01000006.1 Genbank gene 108881 110431 . + . ID=gene-CJ235_10385;Name=CJ235_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10385 PNGG01000006.1 Protein Homology CDS 108881 110431 . + 0 ID=cds-PMC17768.1;Parent=gene-CJ235_10385;Dbxref=NCBI_GP:PMC17768.1;Name=PMC17768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472695.1;locus_tag=CJ235_10385;product=2-isopropylmalate synthase;protein_id=PMC17768.1;transl_table=11 PNGG01000006.1 Genbank gene 110428 111468 . + . ID=gene-CJ235_10390;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CJ235_10390 PNGG01000006.1 Protein Homology CDS 110428 111468 . + 0 ID=cds-PMC17769.1;Parent=gene-CJ235_10390;Dbxref=NCBI_GP:PMC17769.1;Name=PMC17769.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302711.1;locus_tag=CJ235_10390;product=3-isopropylmalate dehydrogenase;protein_id=PMC17769.1;transl_table=11 PNGG01000006.1 Genbank gene 111487 112857 . + . ID=gene-CJ235_10395;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CJ235_10395 PNGG01000006.1 Protein Homology CDS 111487 112857 . + 0 ID=cds-PMC17770.1;Parent=gene-CJ235_10395;Dbxref=NCBI_GP:PMC17770.1;Name=PMC17770.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765215.1;locus_tag=CJ235_10395;product=3-isopropylmalate dehydratase large subunit;protein_id=PMC17770.1;transl_table=11 PNGG01000006.1 Genbank gene 112858 113445 . + . ID=gene-CJ235_10400;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CJ235_10400 PNGG01000006.1 Protein Homology CDS 112858 113445 . + 0 ID=cds-PMC17771.1;Parent=gene-CJ235_10400;Dbxref=NCBI_GP:PMC17771.1;Name=PMC17771.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472685.1;locus_tag=CJ235_10400;product=3-isopropylmalate dehydratase small subunit;protein_id=PMC17771.1;transl_table=11 PNGG01000006.1 Genbank gene 113465 114733 . + . ID=gene-CJ235_10405;Name=CJ235_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10405 PNGG01000006.1 Protein Homology CDS 113465 114733 . + 0 ID=cds-PMC17772.1;Parent=gene-CJ235_10405;Dbxref=NCBI_GP:PMC17772.1;Name=PMC17772.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B biosynthetic;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CJ235_10405;product=threonine dehydratase;protein_id=PMC17772.1;transl_table=11 PNGG01000006.1 Genbank gene 115373 115487 . - . ID=gene-CJ235_10410;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_10410 PNGG01000006.1 cmsearch rRNA 115373 115487 . - . ID=rna-CJ235_10410;Parent=gene-CJ235_10410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_10410;product=5S ribosomal RNA PNGG01000006.1 cmsearch exon 115373 115487 . - . ID=exon-CJ235_10410-1;Parent=rna-CJ235_10410;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_10410;product=5S ribosomal RNA ##sequence-region PNGG01000007.1 1 103159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000007.1 Genbank region 1 103159 . + . ID=PNGG01000007.1:1..103159;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000007.1 Genbank gene 433 1761 . - . ID=gene-CJ235_10415;Name=CJ235_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10415 PNGG01000007.1 Protein Homology CDS 433 1761 . - 0 ID=cds-PMC17421.1;Parent=gene-CJ235_10415;Dbxref=NCBI_GP:PMC17421.1;Name=PMC17421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506002.1;locus_tag=CJ235_10415;product=sodium-dependent transporter;protein_id=PMC17421.1;transl_table=11 PNGG01000007.1 Genbank gene 2115 2864 . - . ID=gene-CJ235_10420;Name=CJ235_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10420 PNGG01000007.1 Protein Homology CDS 2115 2864 . - 0 ID=cds-PMC17422.1;Parent=gene-CJ235_10420;Dbxref=NCBI_GP:PMC17422.1;Name=PMC17422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472344.1;locus_tag=CJ235_10420;product=carboxylesterase;protein_id=PMC17422.1;transl_table=11 PNGG01000007.1 Genbank gene 3059 3640 . - . ID=gene-CJ235_10425;Name=CJ235_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10425 PNGG01000007.1 Protein Homology CDS 3059 3640 . - 0 ID=cds-PMC17423.1;Parent=gene-CJ235_10425;Dbxref=NCBI_GP:PMC17423.1;Name=PMC17423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466898.1;locus_tag=CJ235_10425;product=peptidase;protein_id=PMC17423.1;transl_table=11 PNGG01000007.1 Genbank gene 3863 5089 . - . ID=gene-CJ235_10430;Name=CJ235_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10430 PNGG01000007.1 Protein Homology CDS 3863 5089 . - 0 ID=cds-PMC17424.1;Parent=gene-CJ235_10430;Dbxref=NCBI_GP:PMC17424.1;Name=PMC17424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472387.1;locus_tag=CJ235_10430;product=MFS transporter;protein_id=PMC17424.1;transl_table=11 PNGG01000007.1 Genbank gene 5370 6803 . + . ID=gene-CJ235_10435;Name=CJ235_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10435 PNGG01000007.1 Protein Homology CDS 5370 6803 . + 0 ID=cds-PMC17425.1;Parent=gene-CJ235_10435;Dbxref=NCBI_GP:PMC17425.1;Name=PMC17425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472335.1;locus_tag=CJ235_10435;product=MFS transporter;protein_id=PMC17425.1;transl_table=11 PNGG01000007.1 Genbank gene 7124 7612 . + . ID=gene-CJ235_10440;Name=CJ235_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10440 PNGG01000007.1 Protein Homology CDS 7124 7612 . + 0 ID=cds-PMC17426.1;Parent=gene-CJ235_10440;Dbxref=NCBI_GP:PMC17426.1;Name=PMC17426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05656.12;locus_tag=CJ235_10440;product=DUF805 domain-containing protein;protein_id=PMC17426.1;transl_table=11 PNGG01000007.1 Genbank gene 7752 7943 . - . ID=gene-CJ235_10445;Name=CJ235_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10445 PNGG01000007.1 Protein Homology CDS 7752 7943 . - 0 ID=cds-PMC17427.1;Parent=gene-CJ235_10445;Dbxref=NCBI_GP:PMC17427.1;Name=PMC17427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000752910.1;locus_tag=CJ235_10445;product=CsbD family protein;protein_id=PMC17427.1;transl_table=11 PNGG01000007.1 Genbank gene 8206 8688 . - . ID=gene-CJ235_10450;Name=CJ235_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10450 PNGG01000007.1 Protein Homology CDS 8206 8688 . - 0 ID=cds-PMC17428.1;Parent=gene-CJ235_10450;Dbxref=NCBI_GP:PMC17428.1;Name=PMC17428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506344.1;locus_tag=CJ235_10450;product=tryptophan-rich sensory protein;protein_id=PMC17428.1;transl_table=11 PNGG01000007.1 Genbank gene 8726 9202 . - . ID=gene-CJ235_10455;Name=CJ235_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10455 PNGG01000007.1 Protein Homology CDS 8726 9202 . - 0 ID=cds-PMC17429.1;Parent=gene-CJ235_10455;Dbxref=NCBI_GP:PMC17429.1;Name=PMC17429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472354.1;locus_tag=CJ235_10455;product=hypothetical protein;protein_id=PMC17429.1;transl_table=11 PNGG01000007.1 Genbank gene 9322 9705 . - . ID=gene-CJ235_10460;Name=CJ235_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10460 PNGG01000007.1 Protein Homology CDS 9322 9705 . - 0 ID=cds-PMC17430.1;Parent=gene-CJ235_10460;Dbxref=NCBI_GP:PMC17430.1;Name=PMC17430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449536.1;locus_tag=CJ235_10460;product=aspartate 1-decarboxylase;protein_id=PMC17430.1;transl_table=11 PNGG01000007.1 Genbank gene 9845 10588 . - . ID=gene-CJ235_10465;Name=CJ235_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10465 PNGG01000007.1 Protein Homology CDS 9845 10588 . - 0 ID=cds-PMC17431.1;Parent=gene-CJ235_10465;Dbxref=NCBI_GP:PMC17431.1;Name=PMC17431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472348.1;locus_tag=CJ235_10465;product=hydrolase;protein_id=PMC17431.1;transl_table=11 PNGG01000007.1 Genbank gene 10686 11120 . - . ID=gene-CJ235_10470;Name=CJ235_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10470 PNGG01000007.1 Protein Homology CDS 10686 11120 . - 0 ID=cds-PMC17432.1;Parent=gene-CJ235_10470;Dbxref=NCBI_GP:PMC17432.1;Name=PMC17432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276813.1;locus_tag=CJ235_10470;product=GNAT family N-acetyltransferase;protein_id=PMC17432.1;transl_table=11 PNGG01000007.1 Genbank gene 11292 11555 . + . ID=gene-CJ235_10475;Name=CJ235_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10475 PNGG01000007.1 Protein Homology CDS 11292 11555 . + 0 ID=cds-PMC17433.1;Parent=gene-CJ235_10475;Dbxref=NCBI_GP:PMC17433.1;Name=PMC17433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454682.1;locus_tag=CJ235_10475;product=hypothetical protein;protein_id=PMC17433.1;transl_table=11 PNGG01000007.1 Genbank gene 11832 12020 . + . ID=gene-CJ235_10480;Name=CJ235_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10480 PNGG01000007.1 Protein Homology CDS 11832 12020 . + 0 ID=cds-PMC17508.1;Parent=gene-CJ235_10480;Dbxref=NCBI_GP:PMC17508.1;Name=PMC17508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493878.1;locus_tag=CJ235_10480;product=hypothetical protein;protein_id=PMC17508.1;transl_table=11 PNGG01000007.1 Genbank pseudogene 12342 13715 . - . ID=gene-CJ235_10485;Name=CJ235_10485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_10485;pseudo=true PNGG01000007.1 Protein Homology CDS 12342 13715 . - 0 ID=cds-CJ235_10485;Parent=gene-CJ235_10485;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477833.1;locus_tag=CJ235_10485;product=MFS transporter;pseudo=true;transl_table=11 PNGG01000007.1 Genbank gene 13824 14504 . + . ID=gene-CJ235_10490;Name=CJ235_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10490 PNGG01000007.1 Protein Homology CDS 13824 14504 . + 0 ID=cds-PMC17434.1;Parent=gene-CJ235_10490;Dbxref=NCBI_GP:PMC17434.1;Name=PMC17434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365681.1;locus_tag=CJ235_10490;product=ArsR family transcriptional regulator;protein_id=PMC17434.1;transl_table=11 PNGG01000007.1 Genbank gene 14805 15020 . - . ID=gene-CJ235_10495;Name=CJ235_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10495 PNGG01000007.1 Protein Homology CDS 14805 15020 . - 0 ID=cds-PMC17435.1;Parent=gene-CJ235_10495;Dbxref=NCBI_GP:PMC17435.1;Name=PMC17435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13936.4;locus_tag=CJ235_10495;product=helix-turn-helix domain-containing protein;protein_id=PMC17435.1;transl_table=11 PNGG01000007.1 Genbank pseudogene 15225 16058 . + . ID=gene-CJ235_10500;Name=CJ235_10500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_10500;pseudo=true PNGG01000007.1 Protein Homology CDS 15225 16058 . + 0 ID=cds-CJ235_10500;Parent=gene-CJ235_10500;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357935.1;locus_tag=CJ235_10500;product=DNA-binding protein;pseudo=true;transl_table=11 PNGG01000007.1 Genbank pseudogene 16196 17133 . + . ID=gene-CJ235_10505;Name=CJ235_10505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_10505;pseudo=true PNGG01000007.1 Protein Homology CDS 16196 17133 . + 0 ID=cds-CJ235_10505;Parent=gene-CJ235_10505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330464.1;locus_tag=CJ235_10505;product=IS30 family transposase;pseudo=true;transl_table=11 PNGG01000007.1 Genbank gene 17217 17636 . - . ID=gene-CJ235_10510;Name=fosB;gbkey=Gene;gene=fosB;gene_biotype=protein_coding;locus_tag=CJ235_10510 PNGG01000007.1 Protein Homology CDS 17217 17636 . - 0 ID=cds-PMC17436.1;Parent=gene-CJ235_10510;Dbxref=NCBI_GP:PMC17436.1;Name=PMC17436.1;gbkey=CDS;gene=fosB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616116.1;locus_tag=CJ235_10510;product=FosB/FosD family fosfomycin resistance bacillithiol transferase;protein_id=PMC17436.1;transl_table=11 PNGG01000007.1 Genbank gene 17968 19509 . - . ID=gene-CJ235_10515;Name=CJ235_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10515 PNGG01000007.1 Protein Homology CDS 17968 19509 . - 0 ID=cds-PMC17437.1;Parent=gene-CJ235_10515;Dbxref=NCBI_GP:PMC17437.1;Name=PMC17437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CJ235_10515;product=glutamine-hydrolyzing GMP synthase;protein_id=PMC17437.1;transl_table=11 PNGG01000007.1 Genbank gene 19539 21005 . - . ID=gene-CJ235_10520;Name=CJ235_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10520 PNGG01000007.1 Protein Homology CDS 19539 21005 . - 0 ID=cds-PMC17438.1;Parent=gene-CJ235_10520;Dbxref=NCBI_GP:PMC17438.1;Name=PMC17438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CJ235_10520;product=IMP dehydrogenase;protein_id=PMC17438.1;transl_table=11 PNGG01000007.1 Genbank gene 21040 22308 . - . ID=gene-CJ235_10525;Name=CJ235_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10525 PNGG01000007.1 Protein Homology CDS 21040 22308 . - 0 ID=cds-PMC17439.1;Parent=gene-CJ235_10525;Dbxref=NCBI_GP:PMC17439.1;Name=PMC17439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CJ235_10525;product=purine permease;protein_id=PMC17439.1;transl_table=11 PNGG01000007.1 Genbank gene 22312 22890 . - . ID=gene-CJ235_10530;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CJ235_10530 PNGG01000007.1 Protein Homology CDS 22312 22890 . - 0 ID=cds-PMC17440.1;Parent=gene-CJ235_10530;Dbxref=NCBI_GP:PMC17440.1;Name=PMC17440.1;gbkey=CDS;gene=xpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445192.1;locus_tag=CJ235_10530;product=xanthine phosphoribosyltransferase;protein_id=PMC17440.1;transl_table=11 PNGG01000007.1 cmsearch riboswitch 23107 23209 . - . ID=id-PNGG01000007.1:23107..23209;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000007.1 Genbank gene 23755 24180 . + . ID=gene-CJ235_10535;Name=CJ235_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10535 PNGG01000007.1 Protein Homology CDS 23755 24180 . + 0 ID=cds-PMC17441.1;Parent=gene-CJ235_10535;Dbxref=NCBI_GP:PMC17441.1;Name=PMC17441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472385.1;locus_tag=CJ235_10535;product=30S ribosomal protein S6;protein_id=PMC17441.1;transl_table=11 PNGG01000007.1 Genbank gene 24418 25095 . + . ID=gene-CJ235_10540;Name=CJ235_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10540 PNGG01000007.1 Protein Homology CDS 24418 25095 . + 0 ID=cds-PMC17442.1;Parent=gene-CJ235_10540;Dbxref=NCBI_GP:PMC17442.1;Name=PMC17442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472361.1;locus_tag=CJ235_10540;product=hypothetical protein;protein_id=PMC17442.1;transl_table=11 PNGG01000007.1 Genbank gene 25229 25837 . + . ID=gene-CJ235_10545;Name=CJ235_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10545 PNGG01000007.1 Protein Homology CDS 25229 25837 . + 0 ID=cds-PMC17443.1;Parent=gene-CJ235_10545;Dbxref=NCBI_GP:PMC17443.1;Name=PMC17443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276834.1;locus_tag=CJ235_10545;product=DNA-binding protein;protein_id=PMC17443.1;transl_table=11 PNGG01000007.1 Genbank gene 26115 26804 . + . ID=gene-CJ235_10550;Name=CJ235_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10550 PNGG01000007.1 Protein Homology CDS 26115 26804 . + 0 ID=cds-PMC17444.1;Parent=gene-CJ235_10550;Dbxref=NCBI_GP:PMC17444.1;Name=PMC17444.1;Note=involved in peptidoglycan cross-linking;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472382.1;locus_tag=CJ235_10550;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=PMC17444.1;transl_table=11 PNGG01000007.1 Genbank gene 26821 27576 . + . ID=gene-CJ235_10555;Name=CJ235_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10555 PNGG01000007.1 Protein Homology CDS 26821 27576 . + 0 ID=cds-PMC17445.1;Parent=gene-CJ235_10555;Dbxref=NCBI_GP:PMC17445.1;Name=PMC17445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472349.1;locus_tag=CJ235_10555;product=class I SAM-dependent methyltransferase;protein_id=PMC17445.1;transl_table=11 PNGG01000007.1 Genbank gene 28039 29433 . + . ID=gene-CJ235_10560;Name=CJ235_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10560 PNGG01000007.1 Protein Homology CDS 28039 29433 . + 0 ID=cds-PMC17446.1;Parent=gene-CJ235_10560;Dbxref=NCBI_GP:PMC17446.1;Name=PMC17446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472356.1;locus_tag=CJ235_10560;product=L-cystine transporter;protein_id=PMC17446.1;transl_table=11 PNGG01000007.1 Genbank gene 29507 30091 . - . ID=gene-CJ235_10565;Name=CJ235_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10565 PNGG01000007.1 GeneMarkS+ CDS 29507 30091 . - 0 ID=cds-PMC17447.1;Parent=gene-CJ235_10565;Dbxref=NCBI_GP:PMC17447.1;Name=PMC17447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10565;product=hypothetical protein;protein_id=PMC17447.1;transl_table=11 PNGG01000007.1 Genbank gene 30261 31016 . - . ID=gene-CJ235_10570;Name=CJ235_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10570 PNGG01000007.1 Protein Homology CDS 30261 31016 . - 0 ID=cds-PMC17448.1;Parent=gene-CJ235_10570;Dbxref=NCBI_GP:PMC17448.1;Name=PMC17448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472379.1;locus_tag=CJ235_10570;product=oxygen-insensitive NADPH nitroreductase;protein_id=PMC17448.1;transl_table=11 PNGG01000007.1 Genbank gene 31240 32016 . + . ID=gene-CJ235_10575;Name=CJ235_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10575 PNGG01000007.1 Protein Homology CDS 31240 32016 . + 0 ID=cds-PMC17449.1;Parent=gene-CJ235_10575;Dbxref=NCBI_GP:PMC17449.1;Name=PMC17449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664070.1;locus_tag=CJ235_10575;product=2-keto-4-pentenoate hydratase;protein_id=PMC17449.1;transl_table=11 PNGG01000007.1 Genbank gene 32235 34232 . + . ID=gene-CJ235_10580;Name=CJ235_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10580 PNGG01000007.1 Protein Homology CDS 32235 34232 . + 0 ID=cds-PMC17450.1;Parent=gene-CJ235_10580;Dbxref=NCBI_GP:PMC17450.1;Name=PMC17450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472367.1;locus_tag=CJ235_10580;product=catalase;protein_id=PMC17450.1;transl_table=11 PNGG01000007.1 Genbank gene 34347 35267 . + . ID=gene-CJ235_10585;Name=CJ235_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10585 PNGG01000007.1 Protein Homology CDS 34347 35267 . + 0 ID=cds-PMC17451.1;Parent=gene-CJ235_10585;Dbxref=NCBI_GP:PMC17451.1;Name=PMC17451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511990.1;locus_tag=CJ235_10585;product=ABC transporter ATP-binding protein;protein_id=PMC17451.1;transl_table=11 PNGG01000007.1 Genbank gene 35365 36213 . + . ID=gene-CJ235_10590;Name=CJ235_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10590 PNGG01000007.1 Protein Homology CDS 35365 36213 . + 0 ID=cds-PMC17452.1;Parent=gene-CJ235_10590;Dbxref=NCBI_GP:PMC17452.1;Name=PMC17452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511989.1;locus_tag=CJ235_10590;product=ABC transporter ATP-binding protein;protein_id=PMC17452.1;transl_table=11 PNGG01000007.1 Genbank gene 36215 36919 . + . ID=gene-CJ235_10595;Name=CJ235_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10595 PNGG01000007.1 Protein Homology CDS 36215 36919 . + 0 ID=cds-PMC17453.1;Parent=gene-CJ235_10595;Dbxref=NCBI_GP:PMC17453.1;Name=PMC17453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01061.22;locus_tag=CJ235_10595;product=hypothetical protein;protein_id=PMC17453.1;transl_table=11 PNGG01000007.1 Genbank gene 37454 38023 . + . ID=gene-CJ235_10600;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CJ235_10600 PNGG01000007.1 Protein Homology CDS 37454 38023 . + 0 ID=cds-PMC17454.1;Parent=gene-CJ235_10600;Dbxref=NCBI_GP:PMC17454.1;Name=PMC17454.1;gbkey=CDS;gene=ahpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CJ235_10600;product=peroxiredoxin;protein_id=PMC17454.1;transl_table=11 PNGG01000007.1 Genbank gene 38040 39563 . + . ID=gene-CJ235_10605;Name=CJ235_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10605 PNGG01000007.1 Protein Homology CDS 38040 39563 . + 0 ID=cds-PMC17455.1;Parent=gene-CJ235_10605;Dbxref=NCBI_GP:PMC17455.1;Name=PMC17455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765913.1;locus_tag=CJ235_10605;product=alkyl hydroperoxide reductase subunit F;protein_id=PMC17455.1;transl_table=11 PNGG01000007.1 Genbank gene 39789 41450 . + . ID=gene-CJ235_10610;Name=CJ235_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10610 PNGG01000007.1 GeneMarkS+ CDS 39789 41450 . + 0 ID=cds-PMC17456.1;Parent=gene-CJ235_10610;Dbxref=NCBI_GP:PMC17456.1;Name=PMC17456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10610;product=hypothetical protein;protein_id=PMC17456.1;transl_table=11 PNGG01000007.1 Genbank gene 41674 42291 . + . ID=gene-CJ235_10615;Name=CJ235_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10615 PNGG01000007.1 Protein Homology CDS 41674 42291 . + 0 ID=cds-PMC17457.1;Parent=gene-CJ235_10615;Dbxref=NCBI_GP:PMC17457.1;Name=PMC17457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472727.1;locus_tag=CJ235_10615;product=NDxxF motif lipoprotein;protein_id=PMC17457.1;transl_table=11 PNGG01000007.1 Genbank gene 42550 42732 . + . ID=gene-CJ235_10620;Name=CJ235_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10620 PNGG01000007.1 Protein Homology CDS 42550 42732 . + 0 ID=cds-PMC17458.1;Parent=gene-CJ235_10620;Dbxref=NCBI_GP:PMC17458.1;Name=PMC17458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506065.1;locus_tag=CJ235_10620;product=hypothetical protein;protein_id=PMC17458.1;transl_table=11 PNGG01000007.1 Genbank gene 43087 43446 . + . ID=gene-CJ235_10625;Name=CJ235_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10625 PNGG01000007.1 GeneMarkS+ CDS 43087 43446 . + 0 ID=cds-PMC17459.1;Parent=gene-CJ235_10625;Dbxref=NCBI_GP:PMC17459.1;Name=PMC17459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10625;product=hypothetical protein;protein_id=PMC17459.1;transl_table=11 PNGG01000007.1 Genbank gene 43661 44278 . - . ID=gene-CJ235_10630;Name=CJ235_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10630 PNGG01000007.1 Protein Homology CDS 43661 44278 . - 0 ID=cds-PMC17460.1;Parent=gene-CJ235_10630;Dbxref=NCBI_GP:PMC17460.1;Name=PMC17460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484280.1;locus_tag=CJ235_10630;product=LysE family translocator;protein_id=PMC17460.1;transl_table=11 PNGG01000007.1 Genbank gene 44774 44998 . + . ID=gene-CJ235_10635;Name=CJ235_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10635 PNGG01000007.1 Protein Homology CDS 44774 44998 . + 0 ID=cds-PMC17461.1;Parent=gene-CJ235_10635;Dbxref=NCBI_GP:PMC17461.1;Name=PMC17461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509600.1;locus_tag=CJ235_10635;product=hypothetical protein;protein_id=PMC17461.1;transl_table=11 PNGG01000007.1 Genbank gene 45082 45480 . - . ID=gene-CJ235_10640;Name=CJ235_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10640 PNGG01000007.1 Protein Homology CDS 45082 45480 . - 0 ID=cds-PMC17462.1;Parent=gene-CJ235_10640;Dbxref=NCBI_GP:PMC17462.1;Name=PMC17462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472771.1;locus_tag=CJ235_10640;product=hypothetical protein;protein_id=PMC17462.1;transl_table=11 PNGG01000007.1 Genbank gene 45577 46557 . - . ID=gene-CJ235_10645;Name=CJ235_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10645 PNGG01000007.1 Protein Homology CDS 45577 46557 . - 0 ID=cds-PMC17463.1;Parent=gene-CJ235_10645;Dbxref=NCBI_GP:PMC17463.1;Name=PMC17463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472740.1;locus_tag=CJ235_10645;product=ketoacyl-ACP synthase III;protein_id=PMC17463.1;transl_table=11 PNGG01000007.1 Genbank gene 46942 47181 . - . ID=gene-CJ235_10650;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CJ235_10650 PNGG01000007.1 Protein Homology CDS 46942 47181 . - 0 ID=cds-PMC17464.1;Parent=gene-CJ235_10650;Dbxref=NCBI_GP:PMC17464.1;Name=PMC17464.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472734.1;locus_tag=CJ235_10650;product=30S ribosomal protein S18;protein_id=PMC17464.1;transl_table=11 PNGG01000007.1 Genbank gene 47234 47743 . - . ID=gene-CJ235_10655;Name=CJ235_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10655 PNGG01000007.1 Protein Homology CDS 47234 47743 . - 0 ID=cds-PMC17465.1;Parent=gene-CJ235_10655;Dbxref=NCBI_GP:PMC17465.1;Name=PMC17465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765926.1;locus_tag=CJ235_10655;product=single-stranded DNA-binding protein;protein_id=PMC17465.1;transl_table=11 PNGG01000007.1 Genbank gene 47759 48067 . - . ID=gene-CJ235_10660;Name=CJ235_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10660 PNGG01000007.1 Protein Homology CDS 47759 48067 . - 0 ID=cds-PMC17466.1;Parent=gene-CJ235_10660;Dbxref=NCBI_GP:PMC17466.1;Name=PMC17466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303966.1;locus_tag=CJ235_10660;product=30S ribosomal protein S6;protein_id=PMC17466.1;transl_table=11 PNGG01000007.1 Genbank gene 48433 49239 . + . ID=gene-CJ235_10665;Name=CJ235_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10665 PNGG01000007.1 Protein Homology CDS 48433 49239 . + 0 ID=cds-PMC17467.1;Parent=gene-CJ235_10665;Dbxref=NCBI_GP:PMC17467.1;Name=PMC17467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506089.1;locus_tag=CJ235_10665;product=lysozyme;protein_id=PMC17467.1;transl_table=11 PNGG01000007.1 Genbank gene 49823 50920 . - . ID=gene-CJ235_10670;Name=CJ235_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10670 PNGG01000007.1 Protein Homology CDS 49823 50920 . - 0 ID=cds-PMC17468.1;Parent=gene-CJ235_10670;Dbxref=NCBI_GP:PMC17468.1;Name=PMC17468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CJ235_10670;product=redox-regulated ATPase YchF;protein_id=PMC17468.1;transl_table=11 PNGG01000007.1 Genbank gene 50933 51133 . - . ID=gene-CJ235_10675;Name=CJ235_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10675 PNGG01000007.1 Protein Homology CDS 50933 51133 . - 0 ID=cds-PMC17469.1;Parent=gene-CJ235_10675;Dbxref=NCBI_GP:PMC17469.1;Name=PMC17469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509654.1;locus_tag=CJ235_10675;product=DUF951 domain-containing protein;protein_id=PMC17469.1;transl_table=11 PNGG01000007.1 Genbank gene 51167 52042 . - . ID=gene-CJ235_10680;Name=CJ235_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10680 PNGG01000007.1 Protein Homology CDS 51167 52042 . - 0 ID=cds-PMC17470.1;Parent=gene-CJ235_10680;Dbxref=NCBI_GP:PMC17470.1;Name=PMC17470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511963.1;locus_tag=CJ235_10680;product=mechanosensitive ion channel family protein;protein_id=PMC17470.1;transl_table=11 PNGG01000007.1 Genbank gene 52402 52842 . + . ID=gene-CJ235_10685;Name=CJ235_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10685 PNGG01000007.1 Protein Homology CDS 52402 52842 . + 0 ID=cds-PMC17471.1;Parent=gene-CJ235_10685;Dbxref=NCBI_GP:PMC17471.1;Name=PMC17471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472730.1;locus_tag=CJ235_10685;product=DNA-binding response regulator;protein_id=PMC17471.1;transl_table=11 PNGG01000007.1 Genbank gene 52839 53294 . + . ID=gene-CJ235_10690;Name=CJ235_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10690 PNGG01000007.1 Protein Homology CDS 52839 53294 . + 0 ID=cds-PMC17472.1;Parent=gene-CJ235_10690;Dbxref=NCBI_GP:PMC17472.1;Name=PMC17472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472745.1;locus_tag=CJ235_10690;product=DUF3021 domain-containing protein;protein_id=PMC17472.1;transl_table=11 PNGG01000007.1 Genbank gene 53404 54228 . - . ID=gene-CJ235_10695;Name=CJ235_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10695 PNGG01000007.1 Protein Homology CDS 53404 54228 . - 0 ID=cds-PMC17473.1;Parent=gene-CJ235_10695;Dbxref=NCBI_GP:PMC17473.1;Name=PMC17473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472755.1;locus_tag=CJ235_10695;product=chromosome partitioning protein ParB;protein_id=PMC17473.1;transl_table=11 PNGG01000007.1 Genbank gene 54862 55965 . + . ID=gene-CJ235_10700;Name=CJ235_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10700 PNGG01000007.1 Protein Homology CDS 54862 55965 . + 0 ID=cds-PMC17474.1;Parent=gene-CJ235_10700;Dbxref=NCBI_GP:PMC17474.1;Name=PMC17474.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765934.1;locus_tag=CJ235_10700;product=cystathionine gamma-synthase;protein_id=PMC17474.1;transl_table=11 PNGG01000007.1 Genbank gene 55962 57098 . + . ID=gene-CJ235_10705;Name=CJ235_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10705 PNGG01000007.1 Protein Homology CDS 55962 57098 . + 0 ID=cds-PMC17475.1;Parent=gene-CJ235_10705;Dbxref=NCBI_GP:PMC17475.1;Name=PMC17475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472772.1;locus_tag=CJ235_10705;product=PLP-dependent transferase;protein_id=PMC17475.1;transl_table=11 PNGG01000007.1 Genbank gene 57091 58932 . + . ID=gene-CJ235_10710;Name=CJ235_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10710 PNGG01000007.1 Protein Homology CDS 57091 58932 . + 0 ID=cds-PMC17476.1;Parent=gene-CJ235_10710;Dbxref=NCBI_GP:PMC17476.1;Name=PMC17476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469799.1;locus_tag=CJ235_10710;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=PMC17476.1;transl_table=11 PNGG01000007.1 Genbank gene 58926 61172 . + . ID=gene-CJ235_10715;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CJ235_10715 PNGG01000007.1 Protein Homology CDS 58926 61172 . + 0 ID=cds-PMC17477.1;Parent=gene-CJ235_10715;Dbxref=NCBI_GP:PMC17477.1;Name=PMC17477.1;gbkey=CDS;gene=metE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765937.1;locus_tag=CJ235_10715;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=PMC17477.1;transl_table=11 PNGG01000007.1 Genbank pseudogene 61326 62066 . + . ID=gene-CJ235_10720;Name=CJ235_10720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CJ235_10720;pseudo=true PNGG01000007.1 Protein Homology CDS 61326 62066 . + 0 ID=cds-CJ235_10720;Parent=gene-CJ235_10720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472722.1;locus_tag=CJ235_10720;product=metal-dependent hydrolase;pseudo=true;transl_table=11 PNGG01000007.1 Genbank gene 62345 64456 . + . ID=gene-CJ235_10725;Name=CJ235_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10725 PNGG01000007.1 Protein Homology CDS 62345 64456 . + 0 ID=cds-PMC17478.1;Parent=gene-CJ235_10725;Dbxref=NCBI_GP:PMC17478.1;Name=PMC17478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472768.1;locus_tag=CJ235_10725;product=sulfite reductase [NADPH] flavoprotein alpha-component;protein_id=PMC17478.1;transl_table=11 PNGG01000007.1 Genbank gene 65202 66104 . - . ID=gene-CJ235_10730;Name=nsaS;gbkey=Gene;gene=nsaS;gene_biotype=protein_coding;locus_tag=CJ235_10730 PNGG01000007.1 Protein Homology CDS 65202 66104 . - 0 ID=cds-PMC17479.1;Parent=gene-CJ235_10730;Dbxref=NCBI_GP:PMC17479.1;Name=PMC17479.1;gbkey=CDS;gene=nsaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472754.1;locus_tag=CJ235_10730;product=sensor histidine kinase;protein_id=PMC17479.1;transl_table=11 PNGG01000007.1 Genbank gene 66118 66786 . - . ID=gene-CJ235_10735;Name=CJ235_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10735 PNGG01000007.1 Protein Homology CDS 66118 66786 . - 0 ID=cds-PMC17480.1;Parent=gene-CJ235_10735;Dbxref=NCBI_GP:PMC17480.1;Name=PMC17480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274730.1;locus_tag=CJ235_10735;product=DNA-binding response regulator;protein_id=PMC17480.1;transl_table=11 PNGG01000007.1 Genbank gene 67165 68583 . - . ID=gene-CJ235_10740;Name=CJ235_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10740 PNGG01000007.1 Protein Homology CDS 67165 68583 . - 0 ID=cds-PMC17481.1;Parent=gene-CJ235_10740;Dbxref=NCBI_GP:PMC17481.1;Name=PMC17481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472779.1;locus_tag=CJ235_10740;product=MFS transporter;protein_id=PMC17481.1;transl_table=11 PNGG01000007.1 Genbank gene 69107 70249 . - . ID=gene-CJ235_10745;Name=CJ235_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10745 PNGG01000007.1 Protein Homology CDS 69107 70249 . - 0 ID=cds-PMC17482.1;Parent=gene-CJ235_10745;Dbxref=NCBI_GP:PMC17482.1;Name=PMC17482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763995.1;locus_tag=CJ235_10745;product=NO-inducible flavohemoprotein;protein_id=PMC17482.1;transl_table=11 PNGG01000007.1 Genbank gene 70682 71656 . - . ID=gene-CJ235_10750;Name=CJ235_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10750 PNGG01000007.1 Protein Homology CDS 70682 71656 . - 0 ID=cds-PMC17483.1;Parent=gene-CJ235_10750;Dbxref=NCBI_GP:PMC17483.1;Name=PMC17483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482283.1;locus_tag=CJ235_10750;product=SMP-30/gluconolactonase/LRE family protein;protein_id=PMC17483.1;transl_table=11 PNGG01000007.1 Genbank gene 71922 72761 . - . ID=gene-CJ235_10755;Name=noc;gbkey=Gene;gene=noc;gene_biotype=protein_coding;locus_tag=CJ235_10755 PNGG01000007.1 Protein Homology CDS 71922 72761 . - 0 ID=cds-PMC17484.1;Parent=gene-CJ235_10755;Dbxref=NCBI_GP:PMC17484.1;Name=PMC17484.1;gbkey=CDS;gene=noc;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501495.1;locus_tag=CJ235_10755;product=nucleoid occlusion protein;protein_id=PMC17484.1;transl_table=11 PNGG01000007.1 Genbank gene 72800 73516 . - . ID=gene-CJ235_10760;Name=CJ235_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10760 PNGG01000007.1 Protein Homology CDS 72800 73516 . - 0 ID=cds-PMC17485.1;Parent=gene-CJ235_10760;Dbxref=NCBI_GP:PMC17485.1;Name=PMC17485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481958.1;locus_tag=CJ235_10760;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=PMC17485.1;transl_table=11 PNGG01000007.1 Genbank gene 73518 75395 . - . ID=gene-CJ235_10765;Name=CJ235_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10765 PNGG01000007.1 Protein Homology CDS 73518 75395 . - 0 ID=cds-PMC17486.1;Parent=gene-CJ235_10765;Dbxref=NCBI_GP:PMC17486.1;Name=PMC17486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765971.1;locus_tag=CJ235_10765;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=PMC17486.1;transl_table=11 PNGG01000007.1 Genbank gene 75411 76790 . - . ID=gene-CJ235_10770;Name=CJ235_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10770 PNGG01000007.1 Protein Homology CDS 75411 76790 . - 0 ID=cds-PMC17509.1;Parent=gene-CJ235_10770;Dbxref=NCBI_GP:PMC17509.1;Name=PMC17509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175624.1;locus_tag=CJ235_10770;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=PMC17509.1;transl_table=11 PNGG01000007.1 Genbank gene 76944 77291 . - . ID=gene-CJ235_10775;Name=CJ235_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10775 PNGG01000007.1 Protein Homology CDS 76944 77291 . - 0 ID=cds-PMC17487.1;Parent=gene-CJ235_10775;Dbxref=NCBI_GP:PMC17487.1;Name=PMC17487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765973.1;locus_tag=CJ235_10775;product=ribonuclease P protein component;protein_id=PMC17487.1;transl_table=11 PNGG01000007.1 Genbank gene 77603 77740 . - . ID=gene-CJ235_10780;Name=CJ235_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10780 PNGG01000007.1 Protein Homology CDS 77603 77740 . - 0 ID=cds-PMC17488.1;Parent=gene-CJ235_10780;Dbxref=NCBI_GP:PMC17488.1;Name=PMC17488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CJ235_10780;product=50S ribosomal protein L34;protein_id=PMC17488.1;transl_table=11 PNGG01000007.1 Genbank gene 78481 79839 . + . ID=gene-CJ235_10785;Name=CJ235_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10785 PNGG01000007.1 Protein Homology CDS 78481 79839 . + 0 ID=cds-PMC17489.1;Parent=gene-CJ235_10785;Dbxref=NCBI_GP:PMC17489.1;Name=PMC17489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763556.1;locus_tag=CJ235_10785;product=chromosomal replication initiator protein DnaA;protein_id=PMC17489.1;transl_table=11 PNGG01000007.1 Genbank gene 80072 81205 . + . ID=gene-CJ235_10790;Name=CJ235_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10790 PNGG01000007.1 Protein Homology CDS 80072 81205 . + 0 ID=cds-PMC17490.1;Parent=gene-CJ235_10790;Dbxref=NCBI_GP:PMC17490.1;Name=PMC17490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CJ235_10790;product=DNA polymerase III subunit beta;protein_id=PMC17490.1;transl_table=11 PNGG01000007.1 Genbank gene 81680 81913 . + . ID=gene-CJ235_10795;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CJ235_10795 PNGG01000007.1 Protein Homology CDS 81680 81913 . + 0 ID=cds-PMC17491.1;Parent=gene-CJ235_10795;Dbxref=NCBI_GP:PMC17491.1;Name=PMC17491.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249646.1;locus_tag=CJ235_10795;product=S4 domain-containing protein YaaA;protein_id=PMC17491.1;transl_table=11 PNGG01000007.1 Genbank gene 81910 83025 . + . ID=gene-CJ235_10800;Name=CJ235_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10800 PNGG01000007.1 Protein Homology CDS 81910 83025 . + 0 ID=cds-PMC17492.1;Parent=gene-CJ235_10800;Dbxref=NCBI_GP:PMC17492.1;Name=PMC17492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236157.1;locus_tag=CJ235_10800;product=DNA replication/repair protein RecF;protein_id=PMC17492.1;transl_table=11 PNGG01000007.1 Genbank gene 83047 84975 . + . ID=gene-CJ235_10805;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CJ235_10805 PNGG01000007.1 Protein Homology CDS 83047 84975 . + 0 ID=cds-PMC17493.1;Parent=gene-CJ235_10805;Dbxref=NCBI_GP:PMC17493.1;Name=PMC17493.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898448.1;locus_tag=CJ235_10805;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=PMC17493.1;transl_table=11 PNGG01000007.1 Genbank gene 85011 87680 . + . ID=gene-CJ235_10810;Name=CJ235_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10810 PNGG01000007.1 Protein Homology CDS 85011 87680 . + 0 ID=cds-PMC17494.1;Parent=gene-CJ235_10810;Dbxref=NCBI_GP:PMC17494.1;Name=PMC17494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492068.1;locus_tag=CJ235_10810;product=DNA gyrase subunit A;protein_id=PMC17494.1;transl_table=11 PNGG01000007.1 Genbank gene 87888 88445 . + . ID=gene-CJ235_10815;Name=CJ235_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10815 PNGG01000007.1 GeneMarkS+ CDS 87888 88445 . + 0 ID=cds-PMC17495.1;Parent=gene-CJ235_10815;Dbxref=NCBI_GP:PMC17495.1;Name=PMC17495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10815;product=hypothetical protein;protein_id=PMC17495.1;transl_table=11 PNGG01000007.1 Genbank gene 88519 89139 . - . ID=gene-CJ235_10820;Name=CJ235_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10820 PNGG01000007.1 Protein Homology CDS 88519 89139 . - 0 ID=cds-PMC17496.1;Parent=gene-CJ235_10820;Dbxref=NCBI_GP:PMC17496.1;Name=PMC17496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436218.1;locus_tag=CJ235_10820;product=lysine transporter LysE;protein_id=PMC17496.1;transl_table=11 PNGG01000007.1 Genbank gene 89420 90235 . - . ID=gene-CJ235_10825;Name=CJ235_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10825 PNGG01000007.1 Protein Homology CDS 89420 90235 . - 0 ID=cds-PMC17497.1;Parent=gene-CJ235_10825;Dbxref=NCBI_GP:PMC17497.1;Name=PMC17497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461032.1;locus_tag=CJ235_10825;product=NAD(P)H-hydrate dehydratase;protein_id=PMC17497.1;transl_table=11 PNGG01000007.1 Genbank gene 90533 92044 . + . ID=gene-CJ235_10830;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CJ235_10830 PNGG01000007.1 Protein Homology CDS 90533 92044 . + 0 ID=cds-PMC17498.1;Parent=gene-CJ235_10830;Dbxref=NCBI_GP:PMC17498.1;Name=PMC17498.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472747.1;locus_tag=CJ235_10830;product=histidine ammonia-lyase;protein_id=PMC17498.1;transl_table=11 PNGG01000007.1 Genbank gene 92395 93678 . + . ID=gene-CJ235_10835;Name=CJ235_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10835 PNGG01000007.1 Protein Homology CDS 92395 93678 . + 0 ID=cds-PMC17499.1;Parent=gene-CJ235_10835;Dbxref=NCBI_GP:PMC17499.1;Name=PMC17499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383258.1;locus_tag=CJ235_10835;product=serine--tRNA ligase;protein_id=PMC17499.1;transl_table=11 PNGG01000007.1 cmsearch riboswitch 94079 94179 . + . ID=id-PNGG01000007.1:94079..94179;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000007.1 Genbank gene 94282 95244 . + . ID=gene-CJ235_10840;Name=CJ235_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10840 PNGG01000007.1 Protein Homology CDS 94282 95244 . + 0 ID=cds-PMC17500.1;Parent=gene-CJ235_10840;Dbxref=NCBI_GP:PMC17500.1;Name=PMC17500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472776.1;locus_tag=CJ235_10840;product=homoserine acetyltransferase;protein_id=PMC17500.1;transl_table=11 PNGG01000007.1 Genbank gene 95383 96318 . + . ID=gene-CJ235_10845;Name=CJ235_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10845 PNGG01000007.1 Protein Homology CDS 95383 96318 . + 0 ID=cds-PMC17501.1;Parent=gene-CJ235_10845;Dbxref=NCBI_GP:PMC17501.1;Name=PMC17501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274370.1;locus_tag=CJ235_10845;product=DUF2232 domain-containing protein;protein_id=PMC17501.1;transl_table=11 PNGG01000007.1 Genbank gene 96333 98300 . + . ID=gene-CJ235_10850;Name=CJ235_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10850 PNGG01000007.1 Protein Homology CDS 96333 98300 . + 0 ID=cds-PMC17502.1;Parent=gene-CJ235_10850;Dbxref=NCBI_GP:PMC17502.1;Name=PMC17502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763568.1;locus_tag=CJ235_10850;product=DHH family phosphoesterase;protein_id=PMC17502.1;transl_table=11 PNGG01000007.1 Genbank gene 98297 98746 . + . ID=gene-CJ235_10855;Name=CJ235_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10855 PNGG01000007.1 Protein Homology CDS 98297 98746 . + 0 ID=cds-PMC17503.1;Parent=gene-CJ235_10855;Dbxref=NCBI_GP:PMC17503.1;Name=PMC17503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468525.1;locus_tag=CJ235_10855;product=50S ribosomal protein L9;protein_id=PMC17503.1;transl_table=11 PNGG01000007.1 Genbank gene 98779 100179 . + . ID=gene-CJ235_10860;Name=CJ235_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10860 PNGG01000007.1 Protein Homology CDS 98779 100179 . + 0 ID=cds-PMC17504.1;Parent=gene-CJ235_10860;Dbxref=NCBI_GP:PMC17504.1;Name=PMC17504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763570.1;locus_tag=CJ235_10860;product=replicative DNA helicase;protein_id=PMC17504.1;transl_table=11 PNGG01000007.1 Genbank gene 100474 101757 . + . ID=gene-CJ235_10865;Name=CJ235_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10865 PNGG01000007.1 Protein Homology CDS 100474 101757 . + 0 ID=cds-PMC17505.1;Parent=gene-CJ235_10865;Dbxref=NCBI_GP:PMC17505.1;Name=PMC17505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_763571.1;locus_tag=CJ235_10865;product=adenylosuccinate synthase;protein_id=PMC17505.1;transl_table=11 PNGG01000007.1 Genbank gene 102019 102495 . - . ID=gene-CJ235_10870;Name=CJ235_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10870 PNGG01000007.1 Protein Homology CDS 102019 102495 . - 0 ID=cds-PMC17506.1;Parent=gene-CJ235_10870;Dbxref=NCBI_GP:PMC17506.1;Name=PMC17506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472765.1;locus_tag=CJ235_10870;product=hypothetical protein;protein_id=PMC17506.1;transl_table=11 PNGG01000007.1 Genbank gene 102604 102975 . - . ID=gene-CJ235_10875;Name=CJ235_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10875 PNGG01000007.1 Protein Homology CDS 102604 102975 . - 0 ID=cds-PMC17507.1;Parent=gene-CJ235_10875;Dbxref=NCBI_GP:PMC17507.1;Name=PMC17507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167;locus_tag=CJ235_10875;product=hypothetical protein;protein_id=PMC17507.1;transl_table=11 ##sequence-region PNGG01000008.1 1 96368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000008.1 Genbank region 1 96368 . + . ID=PNGG01000008.1:1..96368;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000008.1 Genbank gene 43 157 . + . ID=gene-CJ235_10880;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_10880 PNGG01000008.1 cmsearch rRNA 43 157 . + . ID=rna-CJ235_10880;Parent=gene-CJ235_10880;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_10880;product=5S ribosomal RNA PNGG01000008.1 cmsearch exon 43 157 . + . ID=exon-CJ235_10880-1;Parent=rna-CJ235_10880;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_10880;product=5S ribosomal RNA PNGG01000008.1 Genbank gene 168 242 . + . ID=gene-CJ235_10885;Name=CJ235_10885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10885 PNGG01000008.1 tRNAscan-SE tRNA 168 242 . + . ID=rna-CJ235_10885;Parent=gene-CJ235_10885;anticodon=(pos:200..202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10885;product=tRNA-Asn PNGG01000008.1 tRNAscan-SE exon 168 242 . + . ID=exon-CJ235_10885-1;Parent=rna-CJ235_10885;anticodon=(pos:200..202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10885;product=tRNA-Asn PNGG01000008.1 Genbank gene 246 317 . + . ID=gene-CJ235_10890;Name=CJ235_10890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10890 PNGG01000008.1 tRNAscan-SE tRNA 246 317 . + . ID=rna-CJ235_10890;Parent=gene-CJ235_10890;anticodon=(pos:279..281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10890;product=tRNA-Glu PNGG01000008.1 tRNAscan-SE exon 246 317 . + . ID=exon-CJ235_10890-1;Parent=rna-CJ235_10890;anticodon=(pos:279..281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10890;product=tRNA-Glu PNGG01000008.1 Genbank gene 323 398 . + . ID=gene-CJ235_10895;Name=CJ235_10895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10895 PNGG01000008.1 tRNAscan-SE tRNA 323 398 . + . ID=rna-CJ235_10895;Parent=gene-CJ235_10895;anticodon=(pos:356..358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10895;product=tRNA-Val PNGG01000008.1 tRNAscan-SE exon 323 398 . + . ID=exon-CJ235_10895-1;Parent=rna-CJ235_10895;anticodon=(pos:356..358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10895;product=tRNA-Val PNGG01000008.1 Genbank gene 417 501 . + . ID=gene-CJ235_10900;Name=CJ235_10900;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10900 PNGG01000008.1 tRNAscan-SE tRNA 417 501 . + . ID=rna-CJ235_10900;Parent=gene-CJ235_10900;anticodon=(pos:452..454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10900;product=tRNA-Tyr PNGG01000008.1 tRNAscan-SE exon 417 501 . + . ID=exon-CJ235_10900-1;Parent=rna-CJ235_10900;anticodon=(pos:452..454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10900;product=tRNA-Tyr PNGG01000008.1 Genbank gene 509 583 . + . ID=gene-CJ235_10905;Name=CJ235_10905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10905 PNGG01000008.1 tRNAscan-SE tRNA 509 583 . + . ID=rna-CJ235_10905;Parent=gene-CJ235_10905;anticodon=(pos:541..543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10905;product=tRNA-Gln PNGG01000008.1 tRNAscan-SE exon 509 583 . + . ID=exon-CJ235_10905-1;Parent=rna-CJ235_10905;anticodon=(pos:541..543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10905;product=tRNA-Gln PNGG01000008.1 Genbank gene 585 657 . + . ID=gene-CJ235_10910;Name=CJ235_10910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_10910 PNGG01000008.1 tRNAscan-SE tRNA 585 657 . + . ID=rna-CJ235_10910;Parent=gene-CJ235_10910;anticodon=(pos:618..620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10910;product=tRNA-Lys PNGG01000008.1 tRNAscan-SE exon 585 657 . + . ID=exon-CJ235_10910-1;Parent=rna-CJ235_10910;anticodon=(pos:618..620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_10910;product=tRNA-Lys PNGG01000008.1 Genbank gene 1072 1977 . + . ID=gene-CJ235_10915;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=CJ235_10915 PNGG01000008.1 Protein Homology CDS 1072 1977 . + 0 ID=cds-PMC17187.1;Parent=gene-CJ235_10915;Dbxref=NCBI_GP:PMC17187.1;Name=PMC17187.1;gbkey=CDS;gene=rocF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507017.1;locus_tag=CJ235_10915;product=arginase;protein_id=PMC17187.1;transl_table=11 PNGG01000008.1 Genbank gene 2415 3221 . + . ID=gene-CJ235_10920;Name=CJ235_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10920 PNGG01000008.1 Protein Homology CDS 2415 3221 . + 0 ID=cds-PMC17188.1;Parent=gene-CJ235_10920;Dbxref=NCBI_GP:PMC17188.1;Name=PMC17188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835538.1;locus_tag=CJ235_10920;product=TIGR00159 family protein;protein_id=PMC17188.1;transl_table=11 PNGG01000008.1 Genbank gene 3222 4154 . + . ID=gene-CJ235_10925;Name=CJ235_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10925 PNGG01000008.1 Protein Homology CDS 3222 4154 . + 0 ID=cds-PMC17189.1;Parent=gene-CJ235_10925;Dbxref=NCBI_GP:PMC17189.1;Name=PMC17189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471647.1;locus_tag=CJ235_10925;product=hypothetical protein;protein_id=PMC17189.1;transl_table=11 PNGG01000008.1 Genbank gene 4183 5535 . + . ID=gene-CJ235_10930;Name=CJ235_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10930 PNGG01000008.1 Protein Homology CDS 4183 5535 . + 0 ID=cds-PMC17190.1;Parent=gene-CJ235_10930;Dbxref=NCBI_GP:PMC17190.1;Name=PMC17190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765307.1;locus_tag=CJ235_10930;product=phosphoglucosamine mutase;protein_id=PMC17190.1;transl_table=11 PNGG01000008.1 Genbank gene 5687 6793 . - . ID=gene-CJ235_10935;Name=CJ235_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10935 PNGG01000008.1 Protein Homology CDS 5687 6793 . - 0 ID=cds-PMC17278.1;Parent=gene-CJ235_10935;Dbxref=NCBI_GP:PMC17278.1;Name=PMC17278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302636.1;locus_tag=CJ235_10935;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=PMC17278.1;transl_table=11 PNGG01000008.1 Genbank gene 6793 7227 . - . ID=gene-CJ235_10940;Name=CJ235_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10940 PNGG01000008.1 Protein Homology CDS 6793 7227 . - 0 ID=cds-PMC17191.1;Parent=gene-CJ235_10940;Dbxref=NCBI_GP:PMC17191.1;Name=PMC17191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500878.1;locus_tag=CJ235_10940;product=PTS mannitol transporter subunit IIA;protein_id=PMC17191.1;transl_table=11 PNGG01000008.1 Genbank gene 7235 9283 . - . ID=gene-CJ235_10945;Name=CJ235_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10945 PNGG01000008.1 Protein Homology CDS 7235 9283 . - 0 ID=cds-PMC17192.1;Parent=gene-CJ235_10945;Dbxref=NCBI_GP:PMC17192.1;Name=PMC17192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507023.1;locus_tag=CJ235_10945;product=PRD domain-containing protein;protein_id=PMC17192.1;transl_table=11 PNGG01000008.1 Genbank gene 9323 10864 . - . ID=gene-CJ235_10950;Name=CJ235_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10950 PNGG01000008.1 Protein Homology CDS 9323 10864 . - 0 ID=cds-PMC17193.1;Parent=gene-CJ235_10950;Dbxref=NCBI_GP:PMC17193.1;Name=PMC17193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471609.1;locus_tag=CJ235_10950;product=PTS mannitol transporter subunit IICBA;protein_id=PMC17193.1;transl_table=11 PNGG01000008.1 Genbank gene 11486 13291 . + . ID=gene-CJ235_10955;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CJ235_10955 PNGG01000008.1 Protein Homology CDS 11486 13291 . + 0 ID=cds-PMC17194.1;Parent=gene-CJ235_10955;Dbxref=NCBI_GP:PMC17194.1;Name=PMC17194.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489249.1;locus_tag=CJ235_10955;product=amidophosphoribosyltransferase;protein_id=PMC17194.1;transl_table=11 PNGG01000008.1 Genbank gene 13425 14207 . + . ID=gene-CJ235_10960;Name=CJ235_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10960 PNGG01000008.1 Protein Homology CDS 13425 14207 . + 0 ID=cds-PMC17195.1;Parent=gene-CJ235_10960;Dbxref=NCBI_GP:PMC17195.1;Name=PMC17195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471632.1;locus_tag=CJ235_10960;product=ABC transporter ATP-binding protein;protein_id=PMC17195.1;transl_table=11 PNGG01000008.1 Genbank gene 14275 15126 . + . ID=gene-CJ235_10965;Name=CJ235_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10965 PNGG01000008.1 Protein Homology CDS 14275 15126 . + 0 ID=cds-PMC17196.1;Parent=gene-CJ235_10965;Dbxref=NCBI_GP:PMC17196.1;Name=PMC17196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471630.1;locus_tag=CJ235_10965;product=Cof-type HAD-IIB family hydrolase;protein_id=PMC17196.1;transl_table=11 PNGG01000008.1 Genbank gene 15213 16151 . - . ID=gene-CJ235_10970;Name=CJ235_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10970 PNGG01000008.1 GeneMarkS+ CDS 15213 16151 . - 0 ID=cds-PMC17197.1;Parent=gene-CJ235_10970;Dbxref=NCBI_GP:PMC17197.1;Name=PMC17197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=CJ235_10970;product=lytic transglycosylase;protein_id=PMC17197.1;transl_table=11 PNGG01000008.1 Genbank gene 16356 17324 . - . ID=gene-CJ235_10975;Name=CJ235_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10975 PNGG01000008.1 Protein Homology CDS 16356 17324 . - 0 ID=cds-PMC17198.1;Parent=gene-CJ235_10975;Dbxref=NCBI_GP:PMC17198.1;Name=PMC17198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435767.1;locus_tag=CJ235_10975;product=cation transporter;protein_id=PMC17198.1;transl_table=11 PNGG01000008.1 Genbank gene 17336 17641 . - . ID=gene-CJ235_10980;Name=CJ235_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10980 PNGG01000008.1 Protein Homology CDS 17336 17641 . - 0 ID=cds-PMC17199.1;Parent=gene-CJ235_10980;Dbxref=NCBI_GP:PMC17199.1;Name=PMC17199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471660.1;locus_tag=CJ235_10980;product=transcriptional regulator;protein_id=PMC17199.1;transl_table=11 PNGG01000008.1 Genbank gene 17789 18439 . + . ID=gene-CJ235_10985;Name=CJ235_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10985 PNGG01000008.1 Protein Homology CDS 17789 18439 . + 0 ID=cds-PMC17200.1;Parent=gene-CJ235_10985;Dbxref=NCBI_GP:PMC17200.1;Name=PMC17200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471652.1;locus_tag=CJ235_10985;product=NAD(P)-dependent oxidoreductase;protein_id=PMC17200.1;transl_table=11 PNGG01000008.1 Genbank gene 18972 19907 . + . ID=gene-CJ235_10990;Name=CJ235_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10990 PNGG01000008.1 Protein Homology CDS 18972 19907 . + 0 ID=cds-PMC17201.1;Parent=gene-CJ235_10990;Dbxref=NCBI_GP:PMC17201.1;Name=PMC17201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722053.1;locus_tag=CJ235_10990;product=mannose-6-phosphate isomerase;protein_id=PMC17201.1;transl_table=11 PNGG01000008.1 Genbank gene 19927 20160 . + . ID=gene-CJ235_10995;Name=CJ235_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_10995 PNGG01000008.1 Protein Homology CDS 19927 20160 . + 0 ID=cds-PMC17202.1;Parent=gene-CJ235_10995;Dbxref=NCBI_GP:PMC17202.1;Name=PMC17202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467689.1;locus_tag=CJ235_10995;product=hypothetical protein;protein_id=PMC17202.1;transl_table=11 PNGG01000008.1 Genbank gene 20220 21200 . + . ID=gene-CJ235_11000;Name=CJ235_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11000 PNGG01000008.1 Protein Homology CDS 20220 21200 . + 0 ID=cds-PMC17203.1;Parent=gene-CJ235_11000;Dbxref=NCBI_GP:PMC17203.1;Name=PMC17203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471658.1;locus_tag=CJ235_11000;product=putative sulfate exporter family transporter;protein_id=PMC17203.1;transl_table=11 PNGG01000008.1 Genbank gene 21431 22804 . + . ID=gene-CJ235_11005;Name=CJ235_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11005 PNGG01000008.1 Protein Homology CDS 21431 22804 . + 0 ID=cds-PMC17204.1;Parent=gene-CJ235_11005;Dbxref=NCBI_GP:PMC17204.1;Name=PMC17204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435819.1;locus_tag=CJ235_11005;product=EVE domain-containing protein;protein_id=PMC17204.1;transl_table=11 PNGG01000008.1 Genbank gene 22957 23361 . + . ID=gene-CJ235_11010;Name=CJ235_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11010 PNGG01000008.1 Protein Homology CDS 22957 23361 . + 0 ID=cds-PMC17205.1;Parent=gene-CJ235_11010;Dbxref=NCBI_GP:PMC17205.1;Name=PMC17205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471602.1;locus_tag=CJ235_11010;product=DUF393 domain-containing protein;protein_id=PMC17205.1;transl_table=11 PNGG01000008.1 Genbank gene 23564 24013 . + . ID=gene-CJ235_11015;Name=CJ235_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11015 PNGG01000008.1 Protein Homology CDS 23564 24013 . + 0 ID=cds-PMC17206.1;Parent=gene-CJ235_11015;Dbxref=NCBI_GP:PMC17206.1;Name=PMC17206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507044.1;locus_tag=CJ235_11015;product=DNA starvation/stationary phase protection protein;protein_id=PMC17206.1;transl_table=11 PNGG01000008.1 Genbank gene 24120 24830 . - . ID=gene-CJ235_11020;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CJ235_11020 PNGG01000008.1 Protein Homology CDS 24120 24830 . - 0 ID=cds-PMC17207.1;Parent=gene-CJ235_11020;Dbxref=NCBI_GP:PMC17207.1;Name=PMC17207.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CJ235_11020;product=purine-nucleoside phosphorylase;protein_id=PMC17207.1;transl_table=11 PNGG01000008.1 Genbank gene 25120 25767 . + . ID=gene-CJ235_11025;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CJ235_11025 PNGG01000008.1 Protein Homology CDS 25120 25767 . + 0 ID=cds-PMC17208.1;Parent=gene-CJ235_11025;Dbxref=NCBI_GP:PMC17208.1;Name=PMC17208.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471613.1;locus_tag=CJ235_11025;product=deoxyribose-phosphate aldolase;protein_id=PMC17208.1;transl_table=11 PNGG01000008.1 Genbank gene 25851 27038 . + . ID=gene-CJ235_11030;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CJ235_11030 PNGG01000008.1 Protein Homology CDS 25851 27038 . + 0 ID=cds-PMC17209.1;Parent=gene-CJ235_11030;Dbxref=NCBI_GP:PMC17209.1;Name=PMC17209.1;gbkey=CDS;gene=deoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765289.1;locus_tag=CJ235_11030;product=phosphopentomutase;protein_id=PMC17209.1;transl_table=11 PNGG01000008.1 Genbank gene 27035 27388 . + . ID=gene-CJ235_11035;Name=CJ235_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11035 PNGG01000008.1 Protein Homology CDS 27035 27388 . + 0 ID=cds-PMC17210.1;Parent=gene-CJ235_11035;Dbxref=NCBI_GP:PMC17210.1;Name=PMC17210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471661.1;locus_tag=CJ235_11035;product=hypothetical protein;protein_id=PMC17210.1;transl_table=11 PNGG01000008.1 Genbank gene 27524 27994 . - . ID=gene-CJ235_11040;Name=CJ235_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11040 PNGG01000008.1 Protein Homology CDS 27524 27994 . - 0 ID=cds-PMC17211.1;Parent=gene-CJ235_11040;Dbxref=NCBI_GP:PMC17211.1;Name=PMC17211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CJ235_11040;product=S-ribosylhomocysteine lyase;protein_id=PMC17211.1;transl_table=11 PNGG01000008.1 Genbank gene 28267 29454 . + . ID=gene-CJ235_11045;Name=CJ235_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11045 PNGG01000008.1 Protein Homology CDS 28267 29454 . + 0 ID=cds-PMC17212.1;Parent=gene-CJ235_11045;Dbxref=NCBI_GP:PMC17212.1;Name=PMC17212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455049.1;locus_tag=CJ235_11045;product=amidohydrolase;protein_id=PMC17212.1;transl_table=11 PNGG01000008.1 Genbank gene 29451 30647 . + . ID=gene-CJ235_11050;Name=CJ235_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11050 PNGG01000008.1 Protein Homology CDS 29451 30647 . + 0 ID=cds-PMC17213.1;Parent=gene-CJ235_11050;Dbxref=NCBI_GP:PMC17213.1;Name=PMC17213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471623.1;locus_tag=CJ235_11050;product=ATP-grasp domain-containing protein;protein_id=PMC17213.1;transl_table=11 PNGG01000008.1 Genbank gene 30826 31491 . + . ID=gene-CJ235_11055;Name=CJ235_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11055 PNGG01000008.1 Protein Homology CDS 30826 31491 . + 0 ID=cds-PMC17214.1;Parent=gene-CJ235_11055;Dbxref=NCBI_GP:PMC17214.1;Name=PMC17214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471649.1;locus_tag=CJ235_11055;product=DUF2750 domain-containing protein;protein_id=PMC17214.1;transl_table=11 PNGG01000008.1 Genbank gene 31637 32434 . - . ID=gene-CJ235_11060;Name=CJ235_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11060 PNGG01000008.1 Protein Homology CDS 31637 32434 . - 0 ID=cds-PMC17215.1;Parent=gene-CJ235_11060;Dbxref=NCBI_GP:PMC17215.1;Name=PMC17215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722069.1;locus_tag=CJ235_11060;product=type II pantothenate kinase;protein_id=PMC17215.1;transl_table=11 PNGG01000008.1 Genbank gene 32584 33444 . + . ID=gene-CJ235_11065;Name=CJ235_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11065 PNGG01000008.1 Protein Homology CDS 32584 33444 . + 0 ID=cds-PMC17216.1;Parent=gene-CJ235_11065;Dbxref=NCBI_GP:PMC17216.1;Name=PMC17216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471618.1;locus_tag=CJ235_11065;product=N-acetyltransferase;protein_id=PMC17216.1;transl_table=11 PNGG01000008.1 Genbank gene 33658 34149 . + . ID=gene-CJ235_11070;Name=CJ235_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11070 PNGG01000008.1 Protein Homology CDS 33658 34149 . + 0 ID=cds-PMC17279.1;Parent=gene-CJ235_11070;Dbxref=NCBI_GP:PMC17279.1;Name=PMC17279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467228.1;locus_tag=CJ235_11070;product=DNA-directed RNA polymerase subunit delta;protein_id=PMC17279.1;transl_table=11 PNGG01000008.1 Genbank gene 34506 36119 . + . ID=gene-CJ235_11075;Name=CJ235_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11075 PNGG01000008.1 Protein Homology CDS 34506 36119 . + 0 ID=cds-PMC17217.1;Parent=gene-CJ235_11075;Dbxref=NCBI_GP:PMC17217.1;Name=PMC17217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471638.1;locus_tag=CJ235_11075;product=CTP synthase;protein_id=PMC17217.1;transl_table=11 PNGG01000008.1 Genbank gene 36341 36862 . - . ID=gene-CJ235_11080;Name=CJ235_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11080 PNGG01000008.1 Protein Homology CDS 36341 36862 . - 0 ID=cds-PMC17218.1;Parent=gene-CJ235_11080;Dbxref=NCBI_GP:PMC17218.1;Name=PMC17218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383946.1;locus_tag=CJ235_11080;product=DUF2529 domain-containing protein;protein_id=PMC17218.1;transl_table=11 PNGG01000008.1 Genbank gene 37437 38696 . + . ID=gene-CJ235_11085;Name=CJ235_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11085 PNGG01000008.1 Protein Homology CDS 37437 38696 . + 0 ID=cds-PMC17219.1;Parent=gene-CJ235_11085;Dbxref=NCBI_GP:PMC17219.1;Name=PMC17219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364820.1;locus_tag=CJ235_11085;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=PMC17219.1;transl_table=11 PNGG01000008.1 Genbank gene 38837 39160 . + . ID=gene-CJ235_11090;Name=CJ235_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11090 PNGG01000008.1 Protein Homology CDS 38837 39160 . + 0 ID=cds-PMC17220.1;Parent=gene-CJ235_11090;Dbxref=NCBI_GP:PMC17220.1;Name=PMC17220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445593.1;locus_tag=CJ235_11090;product=transcriptional regulator;protein_id=PMC17220.1;transl_table=11 PNGG01000008.1 Genbank gene 39341 40768 . + . ID=gene-CJ235_11095;Name=CJ235_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11095 PNGG01000008.1 Protein Homology CDS 39341 40768 . + 0 ID=cds-PMC17221.1;Parent=gene-CJ235_11095;Dbxref=NCBI_GP:PMC17221.1;Name=PMC17221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765275.1;locus_tag=CJ235_11095;product=aldehyde dehydrogenase family protein;protein_id=PMC17221.1;transl_table=11 PNGG01000008.1 Genbank gene 41193 42509 . + . ID=gene-CJ235_11100;Name=CJ235_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11100 PNGG01000008.1 Protein Homology CDS 41193 42509 . + 0 ID=cds-PMC17222.1;Parent=gene-CJ235_11100;Dbxref=NCBI_GP:PMC17222.1;Name=PMC17222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435787.1;locus_tag=CJ235_11100;product=transcription termination factor Rho;protein_id=PMC17222.1;transl_table=11 PNGG01000008.1 Genbank gene 42676 42936 . + . ID=gene-CJ235_11105;Name=rpmE2;gbkey=Gene;gene=rpmE2;gene_biotype=protein_coding;locus_tag=CJ235_11105 PNGG01000008.1 Protein Homology CDS 42676 42936 . + 0 ID=cds-PMC17223.1;Parent=gene-CJ235_11105;Dbxref=NCBI_GP:PMC17223.1;Name=PMC17223.1;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900869.1;locus_tag=CJ235_11105;product=type B 50S ribosomal protein L31;protein_id=PMC17223.1;transl_table=11 PNGG01000008.1 Genbank gene 43290 43895 . + . ID=gene-CJ235_11110;Name=CJ235_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11110 PNGG01000008.1 Protein Homology CDS 43290 43895 . + 0 ID=cds-PMC17224.1;Parent=gene-CJ235_11110;Dbxref=NCBI_GP:PMC17224.1;Name=PMC17224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471656.1;locus_tag=CJ235_11110;product=thymidine kinase;protein_id=PMC17224.1;transl_table=11 PNGG01000008.1 Genbank gene 43896 44975 . + . ID=gene-CJ235_11115;Name=CJ235_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11115 PNGG01000008.1 Protein Homology CDS 43896 44975 . + 0 ID=cds-PMC17225.1;Parent=gene-CJ235_11115;Dbxref=NCBI_GP:PMC17225.1;Name=PMC17225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CJ235_11115;product=peptide chain release factor 1;protein_id=PMC17225.1;transl_table=11 PNGG01000008.1 Genbank gene 44962 45810 . + . ID=gene-CJ235_11120;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CJ235_11120 PNGG01000008.1 Protein Homology CDS 44962 45810 . + 0 ID=cds-PMC17226.1;Parent=gene-CJ235_11120;Dbxref=NCBI_GP:PMC17226.1;Name=PMC17226.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471629.1;locus_tag=CJ235_11120;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=PMC17226.1;transl_table=11 PNGG01000008.1 Genbank gene 45986 47017 . + . ID=gene-CJ235_11125;Name=CJ235_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11125 PNGG01000008.1 Protein Homology CDS 45986 47017 . + 0 ID=cds-PMC17227.1;Parent=gene-CJ235_11125;Dbxref=NCBI_GP:PMC17227.1;Name=PMC17227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471617.1;locus_tag=CJ235_11125;product=threonylcarbamoyl-AMP synthase;protein_id=PMC17227.1;transl_table=11 PNGG01000008.1 Genbank gene 47014 47442 . + . ID=gene-CJ235_11130;Name=CJ235_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11130 PNGG01000008.1 Protein Homology CDS 47014 47442 . + 0 ID=cds-PMC17228.1;Parent=gene-CJ235_11130;Dbxref=NCBI_GP:PMC17228.1;Name=PMC17228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471633.1;locus_tag=CJ235_11130;product=low molecular weight protein arginine phosphatase;protein_id=PMC17228.1;transl_table=11 PNGG01000008.1 Genbank gene 47857 48381 . + . ID=gene-CJ235_11135;Name=CJ235_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11135 PNGG01000008.1 Protein Homology CDS 47857 48381 . + 0 ID=cds-PMC17229.1;Parent=gene-CJ235_11135;Dbxref=NCBI_GP:PMC17229.1;Name=PMC17229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722084.1;locus_tag=CJ235_11135;product=TIGR01440 family protein;protein_id=PMC17229.1;transl_table=11 PNGG01000008.1 Genbank gene 48402 49640 . + . ID=gene-CJ235_11140;Name=CJ235_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11140 PNGG01000008.1 Protein Homology CDS 48402 49640 . + 0 ID=cds-PMC17230.1;Parent=gene-CJ235_11140;Dbxref=NCBI_GP:PMC17230.1;Name=PMC17230.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765265.1;locus_tag=CJ235_11140;product=serine hydroxymethyltransferase;protein_id=PMC17230.1;transl_table=11 PNGG01000008.1 Genbank gene 49659 50288 . + . ID=gene-CJ235_11145;Name=CJ235_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11145 PNGG01000008.1 Protein Homology CDS 49659 50288 . + 0 ID=cds-PMC17231.1;Parent=gene-CJ235_11145;Dbxref=NCBI_GP:PMC17231.1;Name=PMC17231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014613339.1;locus_tag=CJ235_11145;product=uracil phosphoribosyltransferase;protein_id=PMC17231.1;transl_table=11 PNGG01000008.1 Genbank gene 50310 51440 . + . ID=gene-CJ235_11150;Name=CJ235_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11150 PNGG01000008.1 Protein Homology CDS 50310 51440 . + 0 ID=cds-PMC17232.1;Parent=gene-CJ235_11150;Dbxref=NCBI_GP:PMC17232.1;Name=PMC17232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383931.1;locus_tag=CJ235_11150;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=PMC17232.1;transl_table=11 PNGG01000008.1 Genbank gene 51601 51951 . + . ID=gene-CJ235_11155;Name=CJ235_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11155 PNGG01000008.1 Protein Homology CDS 51601 51951 . + 0 ID=cds-PMC17233.1;Parent=gene-CJ235_11155;Dbxref=NCBI_GP:PMC17233.1;Name=PMC17233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461236.1;locus_tag=CJ235_11155;product=hypothetical protein;protein_id=PMC17233.1;transl_table=11 PNGG01000008.1 Genbank gene 51975 52703 . + . ID=gene-CJ235_11160;Name=CJ235_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11160 PNGG01000008.1 Protein Homology CDS 51975 52703 . + 0 ID=cds-PMC17234.1;Parent=gene-CJ235_11160;Dbxref=NCBI_GP:PMC17234.1;Name=PMC17234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765261.1;locus_tag=CJ235_11160;product=F0F1 ATP synthase subunit A;protein_id=PMC17234.1;transl_table=11 PNGG01000008.1 Genbank gene 52747 52959 . + . ID=gene-CJ235_11165;Name=CJ235_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11165 PNGG01000008.1 Protein Homology CDS 52747 52959 . + 0 ID=cds-PMC17235.1;Parent=gene-CJ235_11165;Dbxref=NCBI_GP:PMC17235.1;Name=PMC17235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478963.1;locus_tag=CJ235_11165;product=F0F1 ATP synthase subunit C;protein_id=PMC17235.1;transl_table=11 PNGG01000008.1 Genbank gene 53055 53576 . + . ID=gene-CJ235_11170;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CJ235_11170 PNGG01000008.1 Protein Homology CDS 53055 53576 . + 0 ID=cds-PMC17236.1;Parent=gene-CJ235_11170;Dbxref=NCBI_GP:PMC17236.1;Name=PMC17236.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CJ235_11170;product=ATP synthase F0 subunit B;protein_id=PMC17236.1;transl_table=11 PNGG01000008.1 Genbank gene 53576 54115 . + . ID=gene-CJ235_11175;Name=CJ235_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11175 PNGG01000008.1 Protein Homology CDS 53576 54115 . + 0 ID=cds-PMC17237.1;Parent=gene-CJ235_11175;Dbxref=NCBI_GP:PMC17237.1;Name=PMC17237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471645.1;locus_tag=CJ235_11175;product=F0F1 ATP synthase subunit delta;protein_id=PMC17237.1;transl_table=11 PNGG01000008.1 Genbank gene 54139 55647 . + . ID=gene-CJ235_11180;Name=CJ235_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11180 PNGG01000008.1 Protein Homology CDS 54139 55647 . + 0 ID=cds-PMC17238.1;Parent=gene-CJ235_11180;Dbxref=NCBI_GP:PMC17238.1;Name=PMC17238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636769.1;locus_tag=CJ235_11180;product=F0F1 ATP synthase subunit alpha;protein_id=PMC17238.1;transl_table=11 PNGG01000008.1 Genbank gene 55679 56545 . + . ID=gene-CJ235_11185;Name=CJ235_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11185 PNGG01000008.1 Protein Homology CDS 55679 56545 . + 0 ID=cds-PMC17239.1;Parent=gene-CJ235_11185;Dbxref=NCBI_GP:PMC17239.1;Name=PMC17239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500821.2;locus_tag=CJ235_11185;product=F0F1 ATP synthase subunit gamma;protein_id=PMC17239.1;transl_table=11 PNGG01000008.1 Genbank gene 56567 57979 . + . ID=gene-CJ235_11190;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CJ235_11190 PNGG01000008.1 Protein Homology CDS 56567 57979 . + 0 ID=cds-PMC17240.1;Parent=gene-CJ235_11190;Dbxref=NCBI_GP:PMC17240.1;Name=PMC17240.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CJ235_11190;product=F0F1 ATP synthase subunit beta;protein_id=PMC17240.1;transl_table=11 PNGG01000008.1 Genbank gene 58000 58404 . + . ID=gene-CJ235_11195;Name=CJ235_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11195 PNGG01000008.1 Protein Homology CDS 58000 58404 . + 0 ID=cds-PMC17241.1;Parent=gene-CJ235_11195;Dbxref=NCBI_GP:PMC17241.1;Name=PMC17241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765254.1;locus_tag=CJ235_11195;product=F0F1 ATP synthase subunit epsilon;protein_id=PMC17241.1;transl_table=11 PNGG01000008.1 Genbank gene 58482 58841 . - . ID=gene-CJ235_11200;Name=CJ235_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11200 PNGG01000008.1 Protein Homology CDS 58482 58841 . - 0 ID=cds-PMC17242.1;Parent=gene-CJ235_11200;Dbxref=NCBI_GP:PMC17242.1;Name=PMC17242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150971.1;locus_tag=CJ235_11200;product=DUF488 domain-containing protein;protein_id=PMC17242.1;transl_table=11 PNGG01000008.1 Genbank gene 59026 59460 . + . ID=gene-CJ235_11205;Name=CJ235_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11205 PNGG01000008.1 Protein Homology CDS 59026 59460 . + 0 ID=cds-PMC17243.1;Parent=gene-CJ235_11205;Dbxref=NCBI_GP:PMC17243.1;Name=PMC17243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471631.1;locus_tag=CJ235_11205;product=carboxymuconolactone decarboxylase family protein;protein_id=PMC17243.1;transl_table=11 PNGG01000008.1 Genbank gene 59649 59882 . + . ID=gene-CJ235_11210;Name=CJ235_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11210 PNGG01000008.1 Protein Homology CDS 59649 59882 . + 0 ID=cds-PMC17244.1;Parent=gene-CJ235_11210;Dbxref=NCBI_GP:PMC17244.1;Name=PMC17244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384524.1;locus_tag=CJ235_11210;product=DUF1146 domain-containing protein;protein_id=PMC17244.1;transl_table=11 PNGG01000008.1 Genbank gene 60210 61475 . + . ID=gene-CJ235_11215;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CJ235_11215 PNGG01000008.1 Protein Homology CDS 60210 61475 . + 0 ID=cds-PMC17245.1;Parent=gene-CJ235_11215;Dbxref=NCBI_GP:PMC17245.1;Name=PMC17245.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=CJ235_11215;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=PMC17245.1;transl_table=11 PNGG01000008.1 Genbank gene 61524 61964 . + . ID=gene-CJ235_11220;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CJ235_11220 PNGG01000008.1 Protein Homology CDS 61524 61964 . + 0 ID=cds-PMC17246.1;Parent=gene-CJ235_11220;Dbxref=NCBI_GP:PMC17246.1;Name=PMC17246.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500815.1;locus_tag=CJ235_11220;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=PMC17246.1;transl_table=11 PNGG01000008.1 Genbank gene 62064 62504 . - . ID=gene-CJ235_11225;Name=CJ235_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11225 PNGG01000008.1 Protein Homology CDS 62064 62504 . - 0 ID=cds-PMC17247.1;Parent=gene-CJ235_11225;Dbxref=NCBI_GP:PMC17247.1;Name=PMC17247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722099.1;locus_tag=CJ235_11225;product=hypothetical protein;protein_id=PMC17247.1;transl_table=11 PNGG01000008.1 Genbank gene 62697 63119 . + . ID=gene-CJ235_11230;Name=CJ235_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11230 PNGG01000008.1 Protein Homology CDS 62697 63119 . + 0 ID=cds-PMC17248.1;Parent=gene-CJ235_11230;Dbxref=NCBI_GP:PMC17248.1;Name=PMC17248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471616.1;locus_tag=CJ235_11230;product=single-stranded DNA-binding protein;protein_id=PMC17248.1;transl_table=11 PNGG01000008.1 Genbank gene 63519 64214 . + . ID=gene-CJ235_11235;Name=CJ235_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11235 PNGG01000008.1 Protein Homology CDS 63519 64214 . + 0 ID=cds-PMC17249.1;Parent=gene-CJ235_11235;Dbxref=NCBI_GP:PMC17249.1;Name=PMC17249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471612.1;locus_tag=CJ235_11235;product=transglycosylase;protein_id=PMC17249.1;transl_table=11 PNGG01000008.1 Genbank gene 64865 66703 . + . ID=gene-CJ235_11240;Name=CJ235_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11240 PNGG01000008.1 Protein Homology CDS 64865 66703 . + 0 ID=cds-PMC17250.1;Parent=gene-CJ235_11240;Dbxref=NCBI_GP:PMC17250.1;Name=PMC17250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472796.1;locus_tag=CJ235_11240;product=acetyltransferase;protein_id=PMC17250.1;transl_table=11 PNGG01000008.1 Genbank gene 67146 68939 . + . ID=gene-CJ235_11245;Name=CJ235_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11245 PNGG01000008.1 Protein Homology CDS 67146 68939 . + 0 ID=cds-PMC17251.1;Parent=gene-CJ235_11245;Dbxref=NCBI_GP:PMC17251.1;Name=PMC17251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471120.1;locus_tag=CJ235_11245;product=acetyltransferase;protein_id=PMC17251.1;transl_table=11 PNGG01000008.1 cmsearch riboswitch 69020 69119 . + . ID=id-PNGG01000008.1:69020..69119;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PNGG01000008.1 Genbank gene 69191 69880 . + . ID=gene-CJ235_11250;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CJ235_11250 PNGG01000008.1 Protein Homology CDS 69191 69880 . + 0 ID=cds-PMC17252.1;Parent=gene-CJ235_11250;Dbxref=NCBI_GP:PMC17252.1;Name=PMC17252.1;gbkey=CDS;gene=tenA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482733.1;locus_tag=CJ235_11250;product=thiaminase II;protein_id=PMC17252.1;transl_table=11 PNGG01000008.1 Genbank gene 69873 70694 . + . ID=gene-CJ235_11255;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CJ235_11255 PNGG01000008.1 Protein Homology CDS 69873 70694 . + 0 ID=cds-PMC17253.1;Parent=gene-CJ235_11255;Dbxref=NCBI_GP:PMC17253.1;Name=PMC17253.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636759.1;locus_tag=CJ235_11255;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=PMC17253.1;transl_table=11 PNGG01000008.1 Genbank gene 70684 71478 . + . ID=gene-CJ235_11260;Name=CJ235_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11260 PNGG01000008.1 Protein Homology CDS 70684 71478 . + 0 ID=cds-PMC17254.1;Parent=gene-CJ235_11260;Dbxref=NCBI_GP:PMC17254.1;Name=PMC17254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471092.1;locus_tag=CJ235_11260;product=hydroxyethylthiazole kinase;protein_id=PMC17254.1;transl_table=11 PNGG01000008.1 Genbank gene 71478 72125 . + . ID=gene-CJ235_11265;Name=CJ235_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11265 PNGG01000008.1 Protein Homology CDS 71478 72125 . + 0 ID=cds-PMC17255.1;Parent=gene-CJ235_11265;Dbxref=NCBI_GP:PMC17255.1;Name=PMC17255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471096.1;locus_tag=CJ235_11265;product=thiamine phosphate synthase;protein_id=PMC17255.1;transl_table=11 PNGG01000008.1 Genbank gene 72205 73071 . + . ID=gene-CJ235_11270;Name=CJ235_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11270 PNGG01000008.1 Protein Homology CDS 72205 73071 . + 0 ID=cds-PMC17256.1;Parent=gene-CJ235_11270;Dbxref=NCBI_GP:PMC17256.1;Name=PMC17256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507093.1;locus_tag=CJ235_11270;product=hypothetical protein;protein_id=PMC17256.1;transl_table=11 PNGG01000008.1 Genbank gene 73212 73889 . - . ID=gene-CJ235_11275;Name=CJ235_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11275 PNGG01000008.1 Protein Homology CDS 73212 73889 . - 0 ID=cds-PMC17257.1;Parent=gene-CJ235_11275;Dbxref=NCBI_GP:PMC17257.1;Name=PMC17257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471110.1;locus_tag=CJ235_11275;product=HD domain-containing protein;protein_id=PMC17257.1;transl_table=11 PNGG01000008.1 Genbank gene 73939 75411 . - . ID=gene-CJ235_11280;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CJ235_11280 PNGG01000008.1 Protein Homology CDS 73939 75411 . - 0 ID=cds-PMC17280.1;Parent=gene-CJ235_11280;Dbxref=NCBI_GP:PMC17280.1;Name=PMC17280.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636754.1;locus_tag=CJ235_11280;product=cardiolipin synthase;protein_id=PMC17280.1;transl_table=11 PNGG01000008.1 Genbank gene 75572 75856 . + . ID=gene-CJ235_11285;Name=CJ235_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11285 PNGG01000008.1 Protein Homology CDS 75572 75856 . + 0 ID=cds-PMC17258.1;Parent=gene-CJ235_11285;Dbxref=NCBI_GP:PMC17258.1;Name=PMC17258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765241.1;locus_tag=CJ235_11285;product=CsoR family transcriptional regulator;protein_id=PMC17258.1;transl_table=11 PNGG01000008.1 Genbank gene 75878 76084 . + . ID=gene-CJ235_11290;Name=CJ235_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11290 PNGG01000008.1 Protein Homology CDS 75878 76084 . + 0 ID=cds-PMC17259.1;Parent=gene-CJ235_11290;Dbxref=NCBI_GP:PMC17259.1;Name=PMC17259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471114.1;locus_tag=CJ235_11290;product=hypothetical protein;protein_id=PMC17259.1;transl_table=11 PNGG01000008.1 Genbank gene 76350 76490 . + . ID=gene-CJ235_11295;Name=CJ235_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11295 PNGG01000008.1 Protein Homology CDS 76350 76490 . + 0 ID=cds-PMC17260.1;Parent=gene-CJ235_11295;Dbxref=NCBI_GP:PMC17260.1;Name=PMC17260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002507098.1;locus_tag=CJ235_11295;product=hypothetical protein;protein_id=PMC17260.1;transl_table=11 PNGG01000008.1 Genbank gene 76787 77980 . - . ID=gene-CJ235_11300;Name=CJ235_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11300 PNGG01000008.1 Protein Homology CDS 76787 77980 . - 0 ID=cds-PMC17261.1;Parent=gene-CJ235_11300;Dbxref=NCBI_GP:PMC17261.1;Name=PMC17261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471106.1;locus_tag=CJ235_11300;product=rod shape-determining protein RodA;protein_id=PMC17261.1;transl_table=11 PNGG01000008.1 Genbank gene 78207 79277 . + . ID=gene-CJ235_11305;Name=CJ235_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11305 PNGG01000008.1 Protein Homology CDS 78207 79277 . + 0 ID=cds-PMC17262.1;Parent=gene-CJ235_11305;Dbxref=NCBI_GP:PMC17262.1;Name=PMC17262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765236.1;locus_tag=CJ235_11305;product=D-alanine--D-alanine ligase;protein_id=PMC17262.1;transl_table=11 PNGG01000008.1 Genbank gene 79289 80653 . + . ID=gene-CJ235_11310;Name=CJ235_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11310 PNGG01000008.1 Protein Homology CDS 79289 80653 . + 0 ID=cds-PMC17263.1;Parent=gene-CJ235_11310;Dbxref=NCBI_GP:PMC17263.1;Name=PMC17263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471093.1;locus_tag=CJ235_11310;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=PMC17263.1;transl_table=11 PNGG01000008.1 Genbank gene 80898 82388 . + . ID=gene-CJ235_11315;Name=CJ235_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11315 PNGG01000008.1 Protein Homology CDS 80898 82388 . + 0 ID=cds-PMC17264.1;Parent=gene-CJ235_11315;Dbxref=NCBI_GP:PMC17264.1;Name=PMC17264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765234.1;locus_tag=CJ235_11315;product=ATP-dependent helicase;protein_id=PMC17264.1;transl_table=11 PNGG01000008.1 Genbank gene 82616 83095 . + . ID=gene-CJ235_11320;Name=CJ235_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11320 PNGG01000008.1 Protein Homology CDS 82616 83095 . + 0 ID=cds-PMC17265.1;Parent=gene-CJ235_11320;Dbxref=NCBI_GP:PMC17265.1;Name=PMC17265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03703.12;locus_tag=CJ235_11320;product=hypothetical protein;protein_id=PMC17265.1;transl_table=11 PNGG01000008.1 Genbank gene 83088 84590 . + . ID=gene-CJ235_11325;Name=CJ235_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11325 PNGG01000008.1 Protein Homology CDS 83088 84590 . + 0 ID=cds-PMC17266.1;Parent=gene-CJ235_11325;Dbxref=NCBI_GP:PMC17266.1;Name=PMC17266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471115.1;locus_tag=CJ235_11325;product=hypothetical protein;protein_id=PMC17266.1;transl_table=11 PNGG01000008.1 Genbank gene 84577 85146 . + . ID=gene-CJ235_11330;Name=CJ235_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11330 PNGG01000008.1 Protein Homology CDS 84577 85146 . + 0 ID=cds-PMC17267.1;Parent=gene-CJ235_11330;Dbxref=NCBI_GP:PMC17267.1;Name=PMC17267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03703.12;locus_tag=CJ235_11330;product=hypothetical protein;protein_id=PMC17267.1;transl_table=11 PNGG01000008.1 Genbank gene 85413 85763 . + . ID=gene-CJ235_11335;Name=CJ235_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11335 PNGG01000008.1 Protein Homology CDS 85413 85763 . + 0 ID=cds-PMC17268.1;Parent=gene-CJ235_11335;Dbxref=NCBI_GP:PMC17268.1;Name=PMC17268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471111.1;locus_tag=CJ235_11335;product=holo-ACP synthase;protein_id=PMC17268.1;transl_table=11 PNGG01000008.1 Genbank gene 85835 86983 . + . ID=gene-CJ235_11340;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CJ235_11340 PNGG01000008.1 Protein Homology CDS 85835 86983 . + 0 ID=cds-PMC17269.1;Parent=gene-CJ235_11340;Dbxref=NCBI_GP:PMC17269.1;Name=PMC17269.1;gbkey=CDS;gene=alr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275270.1;locus_tag=CJ235_11340;product=alanine racemase;protein_id=PMC17269.1;transl_table=11 PNGG01000008.1 Genbank gene 87073 87246 . + . ID=gene-CJ235_11345;Name=CJ235_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11345 PNGG01000008.1 Protein Homology CDS 87073 87246 . + 0 ID=cds-PMC17270.1;Parent=gene-CJ235_11345;Dbxref=NCBI_GP:PMC17270.1;Name=PMC17270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765228.1;locus_tag=CJ235_11345;product=antitoxin MazE;protein_id=PMC17270.1;transl_table=11 PNGG01000008.1 Genbank gene 87243 87581 . + . ID=gene-CJ235_11350;Name=CJ235_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11350 PNGG01000008.1 Protein Homology CDS 87243 87581 . + 0 ID=cds-PMC17271.1;Parent=gene-CJ235_11350;Dbxref=NCBI_GP:PMC17271.1;Name=PMC17271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383893.1;locus_tag=CJ235_11350;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=PMC17271.1;transl_table=11 PNGG01000008.1 Genbank gene 88045 89046 . + . ID=gene-CJ235_11355;Name=CJ235_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11355 PNGG01000008.1 Protein Homology CDS 88045 89046 . + 0 ID=cds-PMC17272.1;Parent=gene-CJ235_11355;Dbxref=NCBI_GP:PMC17272.1;Name=PMC17272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765226.1;locus_tag=CJ235_11355;product=serine/threonine protein phosphatase;protein_id=PMC17272.1;transl_table=11 PNGG01000008.1 Genbank gene 89125 89451 . + . ID=gene-CJ235_11360;Name=CJ235_11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11360 PNGG01000008.1 Protein Homology CDS 89125 89451 . + 0 ID=cds-PMC17273.1;Parent=gene-CJ235_11360;Dbxref=NCBI_GP:PMC17273.1;Name=PMC17273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CJ235_11360;product=STAS domain-containing protein;protein_id=PMC17273.1;transl_table=11 PNGG01000008.1 Genbank gene 89423 89932 . + . ID=gene-CJ235_11365;Name=CJ235_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11365 PNGG01000008.1 Protein Homology CDS 89423 89932 . + 0 ID=cds-PMC17274.1;Parent=gene-CJ235_11365;Dbxref=NCBI_GP:PMC17274.1;Name=PMC17274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500777.1;locus_tag=CJ235_11365;product=anti-sigma B factor RsbW;protein_id=PMC17274.1;transl_table=11 PNGG01000008.1 Genbank gene 89907 90677 . + . ID=gene-CJ235_11370;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CJ235_11370 PNGG01000008.1 Protein Homology CDS 89907 90677 . + 0 ID=cds-PMC17275.1;Parent=gene-CJ235_11370;Dbxref=NCBI_GP:PMC17275.1;Name=PMC17275.1;gbkey=CDS;gene=sigB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CJ235_11370;product=RNA polymerase sigma factor SigB;protein_id=PMC17275.1;transl_table=11 PNGG01000008.1 Genbank gene 91237 93387 . + . ID=gene-CJ235_11375;Name=CJ235_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11375 PNGG01000008.1 Protein Homology CDS 91237 93387 . + 0 ID=cds-PMC17276.1;Parent=gene-CJ235_11375;Dbxref=NCBI_GP:PMC17276.1;Name=PMC17276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500775.1;locus_tag=CJ235_11375;product=RNA-binding transcriptional accessory protein;protein_id=PMC17276.1;transl_table=11 PNGG01000008.1 Genbank gene 93380 93835 . + . ID=gene-CJ235_11380;Name=CJ235_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11380 PNGG01000008.1 Protein Homology CDS 93380 93835 . + 0 ID=cds-PMC17277.1;Parent=gene-CJ235_11380;Dbxref=NCBI_GP:PMC17277.1;Name=PMC17277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471100.1;locus_tag=CJ235_11380;product=SprT family protein;protein_id=PMC17277.1;transl_table=11 PNGG01000008.1 Genbank gene 94504 94589 . + . ID=gene-CJ235_11385;Name=CJ235_11385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11385 PNGG01000008.1 tRNAscan-SE tRNA 94504 94589 . + . ID=rna-CJ235_11385;Parent=gene-CJ235_11385;anticodon=(pos:94537..94539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11385;product=tRNA-Leu PNGG01000008.1 tRNAscan-SE exon 94504 94589 . + . ID=exon-CJ235_11385-1;Parent=rna-CJ235_11385;anticodon=(pos:94537..94539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11385;product=tRNA-Leu PNGG01000008.1 Genbank gene 94609 94682 . + . ID=gene-CJ235_11390;Name=CJ235_11390;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11390 PNGG01000008.1 tRNAscan-SE tRNA 94609 94682 . + . ID=rna-CJ235_11390;Parent=gene-CJ235_11390;anticodon=(pos:94641..94643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11390;product=tRNA-Gly PNGG01000008.1 tRNAscan-SE exon 94609 94682 . + . ID=exon-CJ235_11390-1;Parent=rna-CJ235_11390;anticodon=(pos:94641..94643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11390;product=tRNA-Gly PNGG01000008.1 Genbank gene 94804 96360 . + . ID=gene-CJ235_11395;Name=CJ235_11395;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_11395 PNGG01000008.1 Genbank rRNA 94804 96360 . + . ID=rna-CJ235_11395;Parent=gene-CJ235_11395;gbkey=rRNA;locus_tag=CJ235_11395;product=16S ribosomal RNA PNGG01000008.1 Genbank exon 94804 96360 . + . ID=exon-CJ235_11395-1;Parent=rna-CJ235_11395;gbkey=rRNA;locus_tag=CJ235_11395;product=16S ribosomal RNA ##sequence-region PNGG01000009.1 1 49694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=170573 PNGG01000009.1 Genbank region 1 49694 . + . ID=PNGG01000009.1:1..49694;Dbxref=taxon:170573;collection-date=2015;country=USA: Maywood%2C IL;gbkey=Src;isolation-source=catheter;mol_type=genomic DNA;nat-host=Homo sapiens;strain=UMB0834 PNGG01000009.1 Genbank gene 144 219 . - . ID=gene-CJ235_11400;Name=CJ235_11400;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11400 PNGG01000009.1 tRNAscan-SE tRNA 144 219 . - . ID=rna-CJ235_11400;Parent=gene-CJ235_11400;anticodon=(pos:complement(184..186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11400;product=tRNA-Ala PNGG01000009.1 tRNAscan-SE exon 144 219 . - . ID=exon-CJ235_11400-1;Parent=rna-CJ235_11400;anticodon=(pos:complement(184..186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11400;product=tRNA-Ala PNGG01000009.1 Genbank gene 231 304 . - . ID=gene-CJ235_11405;Name=CJ235_11405;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11405 PNGG01000009.1 tRNAscan-SE tRNA 231 304 . - . ID=rna-CJ235_11405;Parent=gene-CJ235_11405;anticodon=(pos:complement(268..270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11405;product=tRNA-Pro PNGG01000009.1 tRNAscan-SE exon 231 304 . - . ID=exon-CJ235_11405-1;Parent=rna-CJ235_11405;anticodon=(pos:complement(268..270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11405;product=tRNA-Pro PNGG01000009.1 Genbank gene 330 406 . - . ID=gene-CJ235_11410;Name=CJ235_11410;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11410 PNGG01000009.1 tRNAscan-SE tRNA 330 406 . - . ID=rna-CJ235_11410;Parent=gene-CJ235_11410;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11410;product=tRNA-Arg PNGG01000009.1 tRNAscan-SE exon 330 406 . - . ID=exon-CJ235_11410-1;Parent=rna-CJ235_11410;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11410;product=tRNA-Arg PNGG01000009.1 Genbank gene 413 502 . - . ID=gene-CJ235_11415;Name=CJ235_11415;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11415 PNGG01000009.1 tRNAscan-SE tRNA 413 502 . - . ID=rna-CJ235_11415;Parent=gene-CJ235_11415;anticodon=(pos:complement(466..468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11415;product=tRNA-Leu PNGG01000009.1 tRNAscan-SE exon 413 502 . - . ID=exon-CJ235_11415-1;Parent=rna-CJ235_11415;anticodon=(pos:complement(466..468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11415;product=tRNA-Leu PNGG01000009.1 Genbank gene 510 584 . - . ID=gene-CJ235_11420;Name=CJ235_11420;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11420 PNGG01000009.1 tRNAscan-SE tRNA 510 584 . - . ID=rna-CJ235_11420;Parent=gene-CJ235_11420;anticodon=(pos:complement(550..552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11420;product=tRNA-Gly PNGG01000009.1 tRNAscan-SE exon 510 584 . - . ID=exon-CJ235_11420-1;Parent=rna-CJ235_11420;anticodon=(pos:complement(550..552));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11420;product=tRNA-Gly PNGG01000009.1 Genbank gene 611 686 . - . ID=gene-CJ235_11425;Name=CJ235_11425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11425 PNGG01000009.1 tRNAscan-SE tRNA 611 686 . - . ID=rna-CJ235_11425;Parent=gene-CJ235_11425;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11425;product=tRNA-Lys PNGG01000009.1 tRNAscan-SE exon 611 686 . - . ID=exon-CJ235_11425-1;Parent=rna-CJ235_11425;anticodon=(pos:complement(651..653));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11425;product=tRNA-Lys PNGG01000009.1 Genbank gene 693 768 . - . ID=gene-CJ235_11430;Name=CJ235_11430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11430 PNGG01000009.1 tRNAscan-SE tRNA 693 768 . - . ID=rna-CJ235_11430;Parent=gene-CJ235_11430;anticodon=(pos:complement(733..735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11430;product=tRNA-Thr PNGG01000009.1 tRNAscan-SE exon 693 768 . - . ID=exon-CJ235_11430-1;Parent=rna-CJ235_11430;anticodon=(pos:complement(733..735));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11430;product=tRNA-Thr PNGG01000009.1 Genbank gene 786 861 . - . ID=gene-CJ235_11435;Name=CJ235_11435;gbkey=Gene;gene_biotype=tRNA;locus_tag=CJ235_11435 PNGG01000009.1 tRNAscan-SE tRNA 786 861 . - . ID=rna-CJ235_11435;Parent=gene-CJ235_11435;anticodon=(pos:complement(826..828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11435;product=tRNA-Val PNGG01000009.1 tRNAscan-SE exon 786 861 . - . ID=exon-CJ235_11435-1;Parent=rna-CJ235_11435;anticodon=(pos:complement(826..828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=CJ235_11435;product=tRNA-Val PNGG01000009.1 Genbank gene 878 992 . - . ID=gene-CJ235_11440;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_11440 PNGG01000009.1 cmsearch rRNA 878 992 . - . ID=rna-CJ235_11440;Parent=gene-CJ235_11440;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_11440;product=5S ribosomal RNA PNGG01000009.1 cmsearch exon 878 992 . - . ID=exon-CJ235_11440-1;Parent=rna-CJ235_11440;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_11440;product=5S ribosomal RNA PNGG01000009.1 Genbank gene 1854 3341 . - . ID=gene-CJ235_11445;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CJ235_11445 PNGG01000009.1 Protein Homology CDS 1854 3341 . - 0 ID=cds-PMC17029.1;Parent=gene-CJ235_11445;Dbxref=NCBI_GP:PMC17029.1;Name=PMC17029.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=CJ235_11445;product=lysine--tRNA ligase;protein_id=PMC17029.1;transl_table=11 PNGG01000009.1 Genbank gene 3602 4081 . - . ID=gene-CJ235_11450;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CJ235_11450 PNGG01000009.1 Protein Homology CDS 3602 4081 . - 0 ID=cds-PMC17030.1;Parent=gene-CJ235_11450;Dbxref=NCBI_GP:PMC17030.1;Name=PMC17030.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465702.1;locus_tag=CJ235_11450;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=PMC17030.1;transl_table=11 PNGG01000009.1 Genbank gene 4074 4445 . - . ID=gene-CJ235_11455;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CJ235_11455 PNGG01000009.1 Protein Homology CDS 4074 4445 . - 0 ID=cds-PMC17031.1;Parent=gene-CJ235_11455;Dbxref=NCBI_GP:PMC17031.1;Name=PMC17031.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614790.1;locus_tag=CJ235_11455;product=dihydroneopterin aldolase;protein_id=PMC17031.1;transl_table=11 PNGG01000009.1 Genbank gene 4423 5226 . - . ID=gene-CJ235_11460;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CJ235_11460 PNGG01000009.1 Protein Homology CDS 4423 5226 . - 0 ID=cds-PMC17032.1;Parent=gene-CJ235_11460;Dbxref=NCBI_GP:PMC17032.1;Name=PMC17032.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303862.1;locus_tag=CJ235_11460;product=dihydropteroate synthase;protein_id=PMC17032.1;transl_table=11 PNGG01000009.1 Genbank gene 5490 6422 . - . ID=gene-CJ235_11465;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CJ235_11465 PNGG01000009.1 Protein Homology CDS 5490 6422 . - 0 ID=cds-PMC17033.1;Parent=gene-CJ235_11465;Dbxref=NCBI_GP:PMC17033.1;Name=PMC17033.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235787.1;locus_tag=CJ235_11465;product=cysteine synthase A;protein_id=PMC17033.1;transl_table=11 PNGG01000009.1 Genbank gene 6532 7407 . - . ID=gene-CJ235_11470;Name=CJ235_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11470 PNGG01000009.1 Protein Homology CDS 6532 7407 . - 0 ID=cds-PMC17034.1;Parent=gene-CJ235_11470;Dbxref=NCBI_GP:PMC17034.1;Name=PMC17034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276749.1;locus_tag=CJ235_11470;product=Hsp33 family molecular chaperone HslO;protein_id=PMC17034.1;transl_table=11 PNGG01000009.1 Genbank gene 7621 9720 . - . ID=gene-CJ235_11475;Name=CJ235_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11475 PNGG01000009.1 Protein Homology CDS 7621 9720 . - 0 ID=cds-PMC17035.1;Parent=gene-CJ235_11475;Dbxref=NCBI_GP:PMC17035.1;Name=PMC17035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473045.1;locus_tag=CJ235_11475;product=zinc metalloprotease;protein_id=PMC17035.1;transl_table=11 PNGG01000009.1 Genbank gene 10077 10616 . - . ID=gene-CJ235_11480;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CJ235_11480 PNGG01000009.1 Protein Homology CDS 10077 10616 . - 0 ID=cds-PMC17036.1;Parent=gene-CJ235_11480;Dbxref=NCBI_GP:PMC17036.1;Name=PMC17036.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=CJ235_11480;product=hypoxanthine phosphoribosyltransferase;protein_id=PMC17036.1;transl_table=11 PNGG01000009.1 Genbank gene 10606 11913 . - . ID=gene-CJ235_11485;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CJ235_11485 PNGG01000009.1 Protein Homology CDS 10606 11913 . - 0 ID=cds-PMC17037.1;Parent=gene-CJ235_11485;Dbxref=NCBI_GP:PMC17037.1;Name=PMC17037.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473040.1;locus_tag=CJ235_11485;product=tRNA lysidine(34) synthetase TilS;protein_id=PMC17037.1;transl_table=11 PNGG01000009.1 Genbank gene 12212 12610 . - . ID=gene-CJ235_11490;Name=CJ235_11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11490 PNGG01000009.1 Protein Homology CDS 12212 12610 . - 0 ID=cds-PMC17038.1;Parent=gene-CJ235_11490;Dbxref=NCBI_GP:PMC17038.1;Name=PMC17038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765830.1;locus_tag=CJ235_11490;product=RNA-binding protein S1;protein_id=PMC17038.1;transl_table=11 PNGG01000009.1 Genbank gene 12789 13190 . - . ID=gene-CJ235_11495;Name=CJ235_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11495 PNGG01000009.1 Protein Homology CDS 12789 13190 . - 0 ID=cds-PMC17039.1;Parent=gene-CJ235_11495;Dbxref=NCBI_GP:PMC17039.1;Name=PMC17039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722018.1;locus_tag=CJ235_11495;product=cell division protein DivIC;protein_id=PMC17039.1;transl_table=11 PNGG01000009.1 Genbank gene 13205 13468 . - . ID=gene-CJ235_11500;Name=CJ235_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11500 PNGG01000009.1 Protein Homology CDS 13205 13468 . - 0 ID=cds-PMC17040.1;Parent=gene-CJ235_11500;Dbxref=NCBI_GP:PMC17040.1;Name=PMC17040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276755.1;locus_tag=CJ235_11500;product=RNA-binding S4 domain-containing protein;protein_id=PMC17040.1;transl_table=11 PNGG01000009.1 Genbank gene 13465 14655 . - . ID=gene-CJ235_11505;Name=CJ235_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11505 PNGG01000009.1 Protein Homology CDS 13465 14655 . - 0 ID=cds-PMC17041.1;Parent=gene-CJ235_11505;Dbxref=NCBI_GP:PMC17041.1;Name=PMC17041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473072.1;locus_tag=CJ235_11505;product=nucleotide pyrophosphohydrolase;protein_id=PMC17041.1;transl_table=11 PNGG01000009.1 Genbank gene 14652 16190 . - . ID=gene-CJ235_11510;Name=CJ235_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11510 PNGG01000009.1 Protein Homology CDS 14652 16190 . - 0 ID=cds-PMC17042.1;Parent=gene-CJ235_11510;Dbxref=NCBI_GP:PMC17042.1;Name=PMC17042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473047.1;locus_tag=CJ235_11510;product=polysaccharide biosynthesis protein;protein_id=PMC17042.1;transl_table=11 PNGG01000009.1 Genbank gene 16180 19692 . - . ID=gene-CJ235_11515;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CJ235_11515 PNGG01000009.1 Protein Homology CDS 16180 19692 . - 0 ID=cds-PMC17043.1;Parent=gene-CJ235_11515;Dbxref=NCBI_GP:PMC17043.1;Name=PMC17043.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276758.1;locus_tag=CJ235_11515;product=transcription-repair coupling factor;protein_id=PMC17043.1;transl_table=11 PNGG01000009.1 Genbank gene 19689 20261 . - . ID=gene-CJ235_11520;Name=CJ235_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11520 PNGG01000009.1 Protein Homology CDS 19689 20261 . - 0 ID=cds-PMC17044.1;Parent=gene-CJ235_11520;Dbxref=NCBI_GP:PMC17044.1;Name=PMC17044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=CJ235_11520;product=aminoacyl-tRNA hydrolase;protein_id=PMC17044.1;transl_table=11 PNGG01000009.1 Genbank gene 20461 21636 . - . ID=gene-CJ235_11525;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CJ235_11525 PNGG01000009.1 Protein Homology CDS 20461 21636 . - 0 ID=cds-PMC17045.1;Parent=gene-CJ235_11525;Dbxref=NCBI_GP:PMC17045.1;Name=PMC17045.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016424679.1;locus_tag=CJ235_11525;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=PMC17045.1;transl_table=11 PNGG01000009.1 Genbank gene 21633 21869 . - . ID=gene-CJ235_11530;Name=CJ235_11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11530 PNGG01000009.1 Protein Homology CDS 21633 21869 . - 0 ID=cds-PMC17046.1;Parent=gene-CJ235_11530;Dbxref=NCBI_GP:PMC17046.1;Name=PMC17046.1;Note=D-alanyl carrier protein subunit%3B involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid%3B D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CJ235_11530;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=PMC17046.1;transl_table=11 PNGG01000009.1 Genbank gene 21908 23128 . - . ID=gene-CJ235_11535;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=CJ235_11535 PNGG01000009.1 Protein Homology CDS 21908 23128 . - 0 ID=cds-PMC17047.1;Parent=gene-CJ235_11535;Dbxref=NCBI_GP:PMC17047.1;Name=PMC17047.1;gbkey=CDS;gene=dltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473076.1;locus_tag=CJ235_11535;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=PMC17047.1;transl_table=11 PNGG01000009.1 Genbank gene 23125 24582 . - . ID=gene-CJ235_11540;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CJ235_11540 PNGG01000009.1 Protein Homology CDS 23125 24582 . - 0 ID=cds-PMC17048.1;Parent=gene-CJ235_11540;Dbxref=NCBI_GP:PMC17048.1;Name=PMC17048.1;gbkey=CDS;gene=dltA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473041.1;locus_tag=CJ235_11540;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=PMC17048.1;transl_table=11 PNGG01000009.1 Genbank gene 24606 24737 . - . ID=gene-CJ235_11545;Name=CJ235_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11545 PNGG01000009.1 Protein Homology CDS 24606 24737 . - 0 ID=cds-PMC17049.1;Parent=gene-CJ235_11545;Dbxref=NCBI_GP:PMC17049.1;Name=PMC17049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383429.1;locus_tag=CJ235_11545;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=PMC17049.1;transl_table=11 PNGG01000009.1 Genbank gene 25229 25891 . - . ID=gene-CJ235_11550;Name=CJ235_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11550 PNGG01000009.1 Protein Homology CDS 25229 25891 . - 0 ID=cds-PMC17050.1;Parent=gene-CJ235_11550;Dbxref=NCBI_GP:PMC17050.1;Name=PMC17050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276760.1;locus_tag=CJ235_11550;product=50S ribosomal protein L25;protein_id=PMC17050.1;transl_table=11 PNGG01000009.1 Genbank gene 26020 26985 . - . ID=gene-CJ235_11555;Name=CJ235_11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11555 PNGG01000009.1 Protein Homology CDS 26020 26985 . - 0 ID=cds-PMC17051.1;Parent=gene-CJ235_11555;Dbxref=NCBI_GP:PMC17051.1;Name=PMC17051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CJ235_11555;product=ribose-phosphate pyrophosphokinase;protein_id=PMC17051.1;transl_table=11 PNGG01000009.1 Genbank gene 27279 28640 . - . ID=gene-CJ235_11560;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CJ235_11560 PNGG01000009.1 Protein Homology CDS 27279 28640 . - 0 ID=cds-PMC17052.1;Parent=gene-CJ235_11560;Dbxref=NCBI_GP:PMC17052.1;Name=PMC17052.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455843.1;locus_tag=CJ235_11560;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=PMC17052.1;transl_table=11 PNGG01000009.1 Genbank gene 29329 29658 . - . ID=gene-CJ235_11565;Name=CJ235_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11565 PNGG01000009.1 Protein Homology CDS 29329 29658 . - 0 ID=cds-PMC17053.1;Parent=gene-CJ235_11565;Dbxref=NCBI_GP:PMC17053.1;Name=PMC17053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002481913.1;locus_tag=CJ235_11565;product=septation protein SpoVG;protein_id=PMC17053.1;transl_table=11 PNGG01000009.1 Genbank gene 29729 30103 . - . ID=gene-CJ235_11570;Name=CJ235_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11570 PNGG01000009.1 Protein Homology CDS 29729 30103 . - 0 ID=cds-PMC17054.1;Parent=gene-CJ235_11570;Dbxref=NCBI_GP:PMC17054.1;Name=PMC17054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499047.1;locus_tag=CJ235_11570;product=RidA family protein;protein_id=PMC17054.1;transl_table=11 PNGG01000009.1 Genbank gene 30090 30944 . - . ID=gene-CJ235_11575;Name=CJ235_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11575 PNGG01000009.1 Protein Homology CDS 30090 30944 . - 0 ID=cds-PMC17055.1;Parent=gene-CJ235_11575;Dbxref=NCBI_GP:PMC17055.1;Name=PMC17055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276765.1;locus_tag=CJ235_11575;product=pur operon repressor;protein_id=PMC17055.1;transl_table=11 PNGG01000009.1 Genbank gene 30959 31807 . - . ID=gene-CJ235_11580;Name=CJ235_11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11580 PNGG01000009.1 Protein Homology CDS 30959 31807 . - 0 ID=cds-PMC17056.1;Parent=gene-CJ235_11580;Dbxref=NCBI_GP:PMC17056.1;Name=PMC17056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473034.1;locus_tag=CJ235_11580;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=PMC17056.1;transl_table=11 PNGG01000009.1 Genbank gene 32189 32452 . - . ID=gene-CJ235_11585;Name=CJ235_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11585 PNGG01000009.1 Protein Homology CDS 32189 32452 . - 0 ID=cds-PMC17057.1;Parent=gene-CJ235_11585;Dbxref=NCBI_GP:PMC17057.1;Name=PMC17057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_765844.1;locus_tag=CJ235_11585;product=hypothetical protein;protein_id=PMC17057.1;transl_table=11 PNGG01000009.1 Genbank gene 32552 33442 . - . ID=gene-CJ235_11590;Name=CJ235_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11590 PNGG01000009.1 Protein Homology CDS 32552 33442 . - 0 ID=cds-PMC17058.1;Parent=gene-CJ235_11590;Dbxref=NCBI_GP:PMC17058.1;Name=PMC17058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473058.1;locus_tag=CJ235_11590;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=PMC17058.1;transl_table=11 PNGG01000009.1 Genbank gene 33455 34003 . - . ID=gene-CJ235_11595;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CJ235_11595 PNGG01000009.1 Protein Homology CDS 33455 34003 . - 0 ID=cds-PMC17059.1;Parent=gene-CJ235_11595;Dbxref=NCBI_GP:PMC17059.1;Name=PMC17059.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452453.1;locus_tag=CJ235_11595;product=DUF4093 domain-containing protein;protein_id=PMC17059.1;transl_table=11 PNGG01000009.1 Genbank gene 34162 34932 . - . ID=gene-CJ235_11600;Name=CJ235_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11600 PNGG01000009.1 Protein Homology CDS 34162 34932 . - 0 ID=cds-PMC17060.1;Parent=gene-CJ235_11600;Dbxref=NCBI_GP:PMC17060.1;Name=PMC17060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473050.1;locus_tag=CJ235_11600;product=metal-dependent hydrolase;protein_id=PMC17060.1;transl_table=11 PNGG01000009.1 Genbank gene 35055 37046 . - . ID=gene-CJ235_11605;Name=CJ235_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11605 PNGG01000009.1 Protein Homology CDS 35055 37046 . - 0 ID=cds-PMC17061.1;Parent=gene-CJ235_11605;Dbxref=NCBI_GP:PMC17061.1;Name=PMC17061.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176426.1;locus_tag=CJ235_11605;product=methionine--tRNA ligase;protein_id=PMC17061.1;transl_table=11 PNGG01000009.1 Genbank gene 37400 38233 . - . ID=gene-CJ235_11610;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CJ235_11610 PNGG01000009.1 Protein Homology CDS 37400 38233 . - 0 ID=cds-PMC17062.1;Parent=gene-CJ235_11610;Dbxref=NCBI_GP:PMC17062.1;Name=PMC17062.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002508732.1;locus_tag=CJ235_11610;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=PMC17062.1;transl_table=11 PNGG01000009.1 Genbank gene 38236 38484 . - . ID=gene-CJ235_11615;Name=CJ235_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11615 PNGG01000009.1 Protein Homology CDS 38236 38484 . - 0 ID=cds-PMC17063.1;Parent=gene-CJ235_11615;Dbxref=NCBI_GP:PMC17063.1;Name=PMC17063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467728.1;locus_tag=CJ235_11615;product=GIY-YIG nuclease family protein;protein_id=PMC17063.1;transl_table=11 PNGG01000009.1 Genbank gene 38477 39202 . - . ID=gene-CJ235_11620;Name=CJ235_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11620 PNGG01000009.1 Protein Homology CDS 38477 39202 . - 0 ID=cds-PMC17064.1;Parent=gene-CJ235_11620;Dbxref=NCBI_GP:PMC17064.1;Name=PMC17064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473049.1;locus_tag=CJ235_11620;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=PMC17064.1;transl_table=11 PNGG01000009.1 Genbank gene 39315 39653 . - . ID=gene-CJ235_11625;Name=CJ235_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11625 PNGG01000009.1 Protein Homology CDS 39315 39653 . - 0 ID=cds-PMC17065.1;Parent=gene-CJ235_11625;Dbxref=NCBI_GP:PMC17065.1;Name=PMC17065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473061.1;locus_tag=CJ235_11625;product=DNA replication initiation control protein YabA;protein_id=PMC17065.1;transl_table=11 PNGG01000009.1 Genbank gene 39668 40471 . - . ID=gene-CJ235_11630;Name=CJ235_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11630 PNGG01000009.1 Protein Homology CDS 39668 40471 . - 0 ID=cds-PMC17066.1;Parent=gene-CJ235_11630;Dbxref=NCBI_GP:PMC17066.1;Name=PMC17066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473039.1;locus_tag=CJ235_11630;product=signal peptidase II;protein_id=PMC17066.1;transl_table=11 PNGG01000009.1 Genbank gene 40474 41400 . - . ID=gene-CJ235_11635;Name=CJ235_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11635 PNGG01000009.1 Protein Homology CDS 40474 41400 . - 0 ID=cds-PMC17067.1;Parent=gene-CJ235_11635;Dbxref=NCBI_GP:PMC17067.1;Name=PMC17067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473067.1;locus_tag=CJ235_11635;product=DNA polymerase III subunit delta';protein_id=PMC17067.1;transl_table=11 PNGG01000009.1 Genbank gene 41522 41851 . - . ID=gene-CJ235_11640;Name=CJ235_11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11640 PNGG01000009.1 Protein Homology CDS 41522 41851 . - 0 ID=cds-PMC17068.1;Parent=gene-CJ235_11640;Dbxref=NCBI_GP:PMC17068.1;Name=PMC17068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CJ235_11640;product=hypothetical protein;protein_id=PMC17068.1;transl_table=11 PNGG01000009.1 Genbank gene 41882 42502 . - . ID=gene-CJ235_11645;Name=CJ235_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11645 PNGG01000009.1 Protein Homology CDS 41882 42502 . - 0 ID=cds-PMC17069.1;Parent=gene-CJ235_11645;Dbxref=NCBI_GP:PMC17069.1;Name=PMC17069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473055.1;locus_tag=CJ235_11645;product=dTMP kinase;protein_id=PMC17069.1;transl_table=11 PNGG01000009.1 Genbank gene 42504 43847 . - . ID=gene-CJ235_11650;Name=CJ235_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11650 PNGG01000009.1 Protein Homology CDS 42504 43847 . - 0 ID=cds-PMC17070.1;Parent=gene-CJ235_11650;Dbxref=NCBI_GP:PMC17070.1;Name=PMC17070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473068.1;locus_tag=CJ235_11650;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=PMC17070.1;transl_table=11 PNGG01000009.1 Genbank gene 44033 45085 . - . ID=gene-CJ235_11655;Name=CJ235_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11655 PNGG01000009.1 Protein Homology CDS 44033 45085 . - 0 ID=cds-PMC17071.1;Parent=gene-CJ235_11655;Dbxref=NCBI_GP:PMC17071.1;Name=PMC17071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473048.1;locus_tag=CJ235_11655;product=transcriptional regulator;protein_id=PMC17071.1;transl_table=11 PNGG01000009.1 Genbank gene 45411 46262 . - . ID=gene-CJ235_11660;Name=CJ235_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CJ235_11660 PNGG01000009.1 Protein Homology CDS 45411 46262 . - 0 ID=cds-PMC17072.1;Parent=gene-CJ235_11660;Dbxref=NCBI_GP:PMC17072.1;Name=PMC17072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473051.1;locus_tag=CJ235_11660;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=PMC17072.1;transl_table=11 PNGG01000009.1 Genbank gene 47382 47496 . - . ID=gene-CJ235_11665;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CJ235_11665 PNGG01000009.1 cmsearch rRNA 47382 47496 . - . ID=rna-CJ235_11665;Parent=gene-CJ235_11665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_11665;product=5S ribosomal RNA PNGG01000009.1 cmsearch exon 47382 47496 . - . ID=exon-CJ235_11665-1;Parent=rna-CJ235_11665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=CJ235_11665;product=5S ribosomal RNA PNGG01000009.1 Genbank gene 47559 49694 . - . ID=gene-CJ235_11670;Name=CJ235_11670;end_range=49694,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CJ235_11670;partial=true PNGG01000009.1 Genbank rRNA 47559 49694 . - . ID=rna-CJ235_11670;Parent=gene-CJ235_11670;end_range=49694,.;gbkey=rRNA;locus_tag=CJ235_11670;partial=true;product=23S ribosomal RNA PNGG01000009.1 Genbank exon 47559 49694 . - . ID=exon-CJ235_11670-1;Parent=rna-CJ235_11670;end_range=49694,.;gbkey=rRNA;locus_tag=CJ235_11670;partial=true;product=23S ribosomal RNA ###