##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM359819v1 #!genome-build-accession NCBI_Assembly:GCA_003598195.1 #!annotation-date 02/20/2018 18:39:54 #!annotation-source NCBI ##sequence-region PTQV01000100.1 1 6609 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000100.1 Genbank region 1 6609 . + . ID=PTQV01000100.1:1..6609;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000100.1 Genbank pseudogene 421 3771 . - . ID=gene-C5O68_11815;Name=C5O68_11815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11815;pseudo=true PTQV01000100.1 Protein Homology CDS 421 3771 . - 0 ID=cds-C5O68_11815;Parent=gene-C5O68_11815;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358386.1;locus_tag=C5O68_11815;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 PTQV01000100.1 Genbank gene 3801 4910 . - . ID=gene-C5O68_11820;Name=C5O68_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11820 PTQV01000100.1 Protein Homology CDS 3801 4910 . - 0 ID=cds-RJP77734.1;Parent=gene-C5O68_11820;Dbxref=NCBI_GP:RJP77734.1;Name=RJP77734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756143.1;locus_tag=C5O68_11820;product=restriction endonuclease subunit S;protein_id=RJP77734.1;transl_table=11 PTQV01000100.1 Genbank gene 4923 6416 . - . ID=gene-C5O68_11825;Name=C5O68_11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11825 PTQV01000100.1 Protein Homology CDS 4923 6416 . - 0 ID=cds-RJP77735.1;Parent=gene-C5O68_11825;Dbxref=NCBI_GP:RJP77735.1;Name=RJP77735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358384.1;locus_tag=C5O68_11825;product=DNA methyltransferase;protein_id=RJP77735.1;transl_table=11 ##sequence-region PTQV01000101.1 1 4781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000101.1 Genbank region 1 4781 . + . ID=PTQV01000101.1:1..4781;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000101.1 Genbank gene 1 78 . + . ID=gene-C5O68_11830;Name=C5O68_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11830;partial=true;start_range=.,1 PTQV01000101.1 Protein Homology CDS 1 78 . + 0 ID=cds-RJP77714.1;Parent=gene-C5O68_11830;Dbxref=NCBI_GP:RJP77714.1;Name=RJP77714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357852.1;locus_tag=C5O68_11830;partial=true;product=aminopeptidase;protein_id=RJP77714.1;start_range=.,1;transl_table=11 PTQV01000101.1 Genbank gene 240 1151 . - . ID=gene-C5O68_11835;Name=C5O68_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11835 PTQV01000101.1 Protein Homology CDS 240 1151 . - 0 ID=cds-RJP77715.1;Parent=gene-C5O68_11835;Dbxref=NCBI_GP:RJP77715.1;Name=RJP77715.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357853.1;locus_tag=C5O68_11835;product=PTS mannose family transporter subunit IID;protein_id=RJP77715.1;transl_table=11 PTQV01000101.1 Genbank gene 1175 1978 . - . ID=gene-C5O68_11840;Name=C5O68_11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11840 PTQV01000101.1 Protein Homology CDS 1175 1978 . - 0 ID=cds-RJP77716.1;Parent=gene-C5O68_11840;Dbxref=NCBI_GP:RJP77716.1;Name=RJP77716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357854.1;locus_tag=C5O68_11840;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=RJP77716.1;transl_table=11 PTQV01000101.1 Genbank gene 2006 2995 . - . ID=gene-C5O68_11845;Name=C5O68_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11845 PTQV01000101.1 Protein Homology CDS 2006 2995 . - 0 ID=cds-RJP77717.1;Parent=gene-C5O68_11845;Dbxref=NCBI_GP:RJP77717.1;Name=RJP77717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021981.1;locus_tag=C5O68_11845;product=PTS mannose transporter subunit IIAB;protein_id=RJP77717.1;transl_table=11 PTQV01000101.1 Genbank gene 3208 4227 . - . ID=gene-C5O68_11850;Name=C5O68_11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11850 PTQV01000101.1 Protein Homology CDS 3208 4227 . - 0 ID=cds-RJP77718.1;Parent=gene-C5O68_11850;Dbxref=NCBI_GP:RJP77718.1;Name=RJP77718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357856.1;locus_tag=C5O68_11850;product=alcohol dehydrogenase AdhP;protein_id=RJP77718.1;transl_table=11 PTQV01000101.1 Genbank gene 4431 4781 . + . ID=gene-C5O68_11855;Name=C5O68_11855;end_range=4781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11855;partial=true PTQV01000101.1 Protein Homology CDS 4431 4781 . + 0 ID=cds-RJP77719.1;Parent=gene-C5O68_11855;Dbxref=NCBI_GP:RJP77719.1;Name=RJP77719.1;end_range=4781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_11855;partial=true;product=IS630 family transposase;protein_id=RJP77719.1;transl_table=11 ##sequence-region PTQV01000102.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000102.1 Genbank region 1 396 . + . ID=PTQV01000102.1:1..396;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000102.1 Genbank gene 1 320 . - . ID=gene-C5O68_11860;Name=C5O68_11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11860;partial=true;start_range=.,1 PTQV01000102.1 Protein Homology CDS 1 320 . - 0 ID=cds-RJP77697.1;Parent=gene-C5O68_11860;Dbxref=NCBI_GP:RJP77697.1;Name=RJP77697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359332.1;locus_tag=C5O68_11860;partial=true;product=hypothetical protein;protein_id=RJP77697.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000103.1 1 2787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000103.1 Genbank region 1 2787 . + . ID=PTQV01000103.1:1..2787;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000103.1 Genbank pseudogene 91 171 . - . ID=gene-C5O68_11865;Name=C5O68_11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11865;pseudo=true PTQV01000103.1 Protein Homology CDS 91 171 . - 0 ID=cds-C5O68_11865;Parent=gene-C5O68_11865;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820552.1;locus_tag=C5O68_11865;product=UDP-galactopuranose mutase;pseudo=true;transl_table=11 PTQV01000103.1 Genbank gene 355 1248 . + . ID=gene-C5O68_11870;Name=C5O68_11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11870 PTQV01000103.1 Protein Homology CDS 355 1248 . + 0 ID=cds-RJP77682.1;Parent=gene-C5O68_11870;Dbxref=NCBI_GP:RJP77682.1;Name=RJP77682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398131.1;locus_tag=C5O68_11870;product=cell filamentation protein Fic;protein_id=RJP77682.1;transl_table=11 PTQV01000103.1 Genbank gene 1772 2230 . + . ID=gene-C5O68_11875;Name=C5O68_11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11875 PTQV01000103.1 Protein Homology CDS 1772 2230 . + 0 ID=cds-RJP77683.1;Parent=gene-C5O68_11875;Dbxref=NCBI_GP:RJP77683.1;Name=RJP77683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186958.1;locus_tag=C5O68_11875;product=DUF4231 domain-containing protein;protein_id=RJP77683.1;transl_table=11 PTQV01000103.1 Genbank gene 2243 2787 . + . ID=gene-C5O68_11880;Name=C5O68_11880;end_range=2787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11880;partial=true PTQV01000103.1 Protein Homology CDS 2243 2787 . + 0 ID=cds-RJP77684.1;Parent=gene-C5O68_11880;Dbxref=NCBI_GP:RJP77684.1;Name=RJP77684.1;end_range=2787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359333.1;locus_tag=C5O68_11880;partial=true;product=hypothetical protein;protein_id=RJP77684.1;transl_table=11 ##sequence-region PTQV01000104.1 1 3345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000104.1 Genbank region 1 3345 . + . ID=PTQV01000104.1:1..3345;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000104.1 Genbank pseudogene 142 225 . + . ID=gene-C5O68_11885;Name=C5O68_11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11885;pseudo=true PTQV01000104.1 Protein Homology CDS 142 225 . + 0 ID=cds-C5O68_11885;Parent=gene-C5O68_11885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846503.1;locus_tag=C5O68_11885;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000104.1 Genbank gene 387 563 . - . ID=gene-C5O68_11890;Name=C5O68_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11890 PTQV01000104.1 Protein Homology CDS 387 563 . - 0 ID=cds-RJP77611.1;Parent=gene-C5O68_11890;Dbxref=NCBI_GP:RJP77611.1;Name=RJP77611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445830.1;locus_tag=C5O68_11890;product=30S ribosomal protein S21;protein_id=RJP77611.1;transl_table=11 PTQV01000104.1 Genbank gene 702 1409 . - . ID=gene-C5O68_11895;Name=C5O68_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11895 PTQV01000104.1 Protein Homology CDS 702 1409 . - 0 ID=cds-RJP77612.1;Parent=gene-C5O68_11895;Dbxref=NCBI_GP:RJP77612.1;Name=RJP77612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445829.1;locus_tag=C5O68_11895;product=glucosamine-6-phosphate deaminase;protein_id=RJP77612.1;transl_table=11 PTQV01000104.1 Genbank gene 1560 2588 . + . ID=gene-C5O68_11900;Name=C5O68_11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11900 PTQV01000104.1 Protein Homology CDS 1560 2588 . + 0 ID=cds-RJP77613.1;Parent=gene-C5O68_11900;Dbxref=NCBI_GP:RJP77613.1;Name=RJP77613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445828.1;locus_tag=C5O68_11900;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=RJP77613.1;transl_table=11 PTQV01000104.1 Genbank gene 3097 3342 . - . ID=gene-C5O68_11905;Name=C5O68_11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11905 PTQV01000104.1 Protein Homology CDS 3097 3342 . - 0 ID=cds-RJP77614.1;Parent=gene-C5O68_11905;Dbxref=NCBI_GP:RJP77614.1;Name=RJP77614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837034.1;locus_tag=C5O68_11905;product=choline-binding protein A;protein_id=RJP77614.1;transl_table=11 ##sequence-region PTQV01000105.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000105.1 Genbank region 1 742 . + . ID=PTQV01000105.1:1..742;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000105.1 Genbank gene 1 742 . + . ID=gene-C5O68_11910;Name=C5O68_11910;end_range=742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11910;partial=true;start_range=.,1 PTQV01000105.1 GeneMarkS+ CDS 1 742 . + 0 ID=cds-RJP77530.1;Parent=gene-C5O68_11910;Dbxref=NCBI_GP:RJP77530.1;Name=RJP77530.1;end_range=742,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_11910;partial=true;product=YSIRK signal domain/LPXTG anchor domain surface protein;protein_id=RJP77530.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000106.1 1 11567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000106.1 Genbank region 1 11567 . + . ID=PTQV01000106.1:1..11567;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000106.1 Genbank pseudogene 86 154 . - . ID=gene-C5O68_11915;Name=C5O68_11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11915;pseudo=true PTQV01000106.1 Protein Homology CDS 86 154 . - 0 ID=cds-C5O68_11915;Parent=gene-C5O68_11915;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_11915;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000106.1 Genbank gene 301 594 . - . ID=gene-C5O68_11920;Name=C5O68_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11920 PTQV01000106.1 Protein Homology CDS 301 594 . - 0 ID=cds-RJP77489.1;Parent=gene-C5O68_11920;Dbxref=NCBI_GP:RJP77489.1;Name=RJP77489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376869.1;locus_tag=C5O68_11920;product=50S ribosomal protein L27;protein_id=RJP77489.1;transl_table=11 PTQV01000106.1 Genbank gene 611 955 . - . ID=gene-C5O68_11925;Name=C5O68_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11925 PTQV01000106.1 Protein Homology CDS 611 955 . - 0 ID=cds-RJP77490.1;Parent=gene-C5O68_11925;Dbxref=NCBI_GP:RJP77490.1;Name=RJP77490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613691.1;locus_tag=C5O68_11925;product=ribosomal-processing cysteine protease Prp;protein_id=RJP77490.1;transl_table=11 PTQV01000106.1 Genbank gene 971 1285 . - . ID=gene-C5O68_11930;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=C5O68_11930 PTQV01000106.1 Protein Homology CDS 971 1285 . - 0 ID=cds-RJP77491.1;Parent=gene-C5O68_11930;Dbxref=NCBI_GP:RJP77491.1;Name=RJP77491.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374562.1;locus_tag=C5O68_11930;product=50S ribosomal protein L21;protein_id=RJP77491.1;transl_table=11 PTQV01000106.1 Genbank gene 1473 2171 . - . ID=gene-C5O68_11935;Name=C5O68_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11935 PTQV01000106.1 Protein Homology CDS 1473 2171 . - 0 ID=cds-RJP77492.1;Parent=gene-C5O68_11935;Dbxref=NCBI_GP:RJP77492.1;Name=RJP77492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358605.1;locus_tag=C5O68_11935;product=DUF1275 domain-containing protein;protein_id=RJP77492.1;transl_table=11 PTQV01000106.1 Genbank gene 2567 2866 . + . ID=gene-C5O68_11940;Name=C5O68_11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11940 PTQV01000106.1 Protein Homology CDS 2567 2866 . + 0 ID=cds-RJP77493.1;Parent=gene-C5O68_11940;Dbxref=NCBI_GP:RJP77493.1;Name=RJP77493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358604.1;locus_tag=C5O68_11940;product=YbaB/EbfC family nucleoid-associated protein;protein_id=RJP77493.1;transl_table=11 PTQV01000106.1 Genbank gene 3208 4182 . - . ID=gene-C5O68_11945;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=C5O68_11945 PTQV01000106.1 Protein Homology CDS 3208 4182 . - 0 ID=cds-RJP77494.1;Parent=gene-C5O68_11945;Dbxref=NCBI_GP:RJP77494.1;Name=RJP77494.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358601.1;locus_tag=C5O68_11945;product=phosphate acetyltransferase;protein_id=RJP77494.1;transl_table=11 PTQV01000106.1 Genbank gene 4226 5122 . - . ID=gene-C5O68_11950;Name=C5O68_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11950 PTQV01000106.1 Protein Homology CDS 4226 5122 . - 0 ID=cds-RJP77495.1;Parent=gene-C5O68_11950;Dbxref=NCBI_GP:RJP77495.1;Name=RJP77495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446291.1;locus_tag=C5O68_11950;product=RluA family pseudouridine synthase;protein_id=RJP77495.1;transl_table=11 PTQV01000106.1 Genbank gene 5119 5937 . - . ID=gene-C5O68_11955;Name=C5O68_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11955 PTQV01000106.1 Protein Homology CDS 5119 5937 . - 0 ID=cds-RJP77496.1;Parent=gene-C5O68_11955;Dbxref=NCBI_GP:RJP77496.1;Name=RJP77496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446292.1;locus_tag=C5O68_11955;product=NAD kinase;protein_id=RJP77496.1;transl_table=11 PTQV01000106.1 Genbank gene 5921 6592 . - . ID=gene-C5O68_11960;Name=C5O68_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11960 PTQV01000106.1 Protein Homology CDS 5921 6592 . - 0 ID=cds-RJP77497.1;Parent=gene-C5O68_11960;Dbxref=NCBI_GP:RJP77497.1;Name=RJP77497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358598.1;locus_tag=C5O68_11960;product=GTP pyrophosphokinase family protein;protein_id=RJP77497.1;transl_table=11 PTQV01000106.1 Genbank gene 6940 7137 . - . ID=gene-C5O68_11965;Name=C5O68_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11965 PTQV01000106.1 Protein Homology CDS 6940 7137 . - 0 ID=cds-RJP77498.1;Parent=gene-C5O68_11965;Dbxref=NCBI_GP:RJP77498.1;Name=RJP77498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511309.1;locus_tag=C5O68_11965;product=hypothetical protein;protein_id=RJP77498.1;transl_table=11 PTQV01000106.1 Genbank gene 7291 7479 . + . ID=gene-C5O68_11970;Name=C5O68_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11970 PTQV01000106.1 Protein Homology CDS 7291 7479 . + 0 ID=cds-RJP77499.1;Parent=gene-C5O68_11970;Dbxref=NCBI_GP:RJP77499.1;Name=RJP77499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260128.1;locus_tag=C5O68_11970;product=hypothetical protein;protein_id=RJP77499.1;transl_table=11 PTQV01000106.1 Genbank gene 7666 8097 . - . ID=gene-C5O68_11975;Name=C5O68_11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11975 PTQV01000106.1 Protein Homology CDS 7666 8097 . - 0 ID=cds-RJP77500.1;Parent=gene-C5O68_11975;Dbxref=NCBI_GP:RJP77500.1;Name=RJP77500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379281.1;locus_tag=C5O68_11975;product=DUF2335 domain-containing protein;protein_id=RJP77500.1;transl_table=11 PTQV01000106.1 Genbank gene 8081 8287 . - . ID=gene-C5O68_11980;Name=C5O68_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11980 PTQV01000106.1 Protein Homology CDS 8081 8287 . - 0 ID=cds-RJP77501.1;Parent=gene-C5O68_11980;Dbxref=NCBI_GP:RJP77501.1;Name=RJP77501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917045.1;locus_tag=C5O68_11980;product=hypothetical protein;protein_id=RJP77501.1;transl_table=11 PTQV01000106.1 Genbank gene 8464 9420 . - . ID=gene-C5O68_11985;Name=C5O68_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11985 PTQV01000106.1 Protein Homology CDS 8464 9420 . - 0 ID=cds-RJP77502.1;Parent=gene-C5O68_11985;Dbxref=NCBI_GP:RJP77502.1;Name=RJP77502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=C5O68_11985;product=autolysin;protein_id=RJP77502.1;transl_table=11 PTQV01000106.1 Genbank gene 9420 9755 . - . ID=gene-C5O68_11990;Name=C5O68_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11990 PTQV01000106.1 Protein Homology CDS 9420 9755 . - 0 ID=cds-RJP77503.1;Parent=gene-C5O68_11990;Dbxref=NCBI_GP:RJP77503.1;Name=RJP77503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186237.1;locus_tag=C5O68_11990;product=phage holin;protein_id=RJP77503.1;transl_table=11 PTQV01000106.1 Genbank gene 9759 10058 . - . ID=gene-C5O68_11995;Name=C5O68_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11995 PTQV01000106.1 Protein Homology CDS 9759 10058 . - 0 ID=cds-RJP77504.1;Parent=gene-C5O68_11995;Dbxref=NCBI_GP:RJP77504.1;Name=RJP77504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246694.1;locus_tag=C5O68_11995;product=hypothetical protein;protein_id=RJP77504.1;transl_table=11 PTQV01000106.1 Genbank gene 10068 10418 . - . ID=gene-C5O68_12000;Name=C5O68_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12000 PTQV01000106.1 Protein Homology CDS 10068 10418 . - 0 ID=cds-RJP77505.1;Parent=gene-C5O68_12000;Dbxref=NCBI_GP:RJP77505.1;Name=RJP77505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001861592.1;locus_tag=C5O68_12000;product=hypothetical protein;protein_id=RJP77505.1;transl_table=11 PTQV01000106.1 Genbank gene 10421 10624 . - . ID=gene-C5O68_12005;Name=C5O68_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12005 PTQV01000106.1 Protein Homology CDS 10421 10624 . - 0 ID=cds-RJP77506.1;Parent=gene-C5O68_12005;Dbxref=NCBI_GP:RJP77506.1;Name=RJP77506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091107.1;locus_tag=C5O68_12005;product=hypothetical protein;protein_id=RJP77506.1;transl_table=11 PTQV01000106.1 Genbank gene 10605 11567 . - . ID=gene-C5O68_12010;Name=C5O68_12010;end_range=11567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12010;partial=true PTQV01000106.1 Protein Homology CDS 10605 11567 . - 0 ID=cds-RJP77507.1;Parent=gene-C5O68_12010;Dbxref=NCBI_GP:RJP77507.1;Name=RJP77507.1;end_range=11567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015997068.1;locus_tag=C5O68_12010;partial=true;product=hypothetical protein;protein_id=RJP77507.1;transl_table=11 ##sequence-region PTQV01000107.1 1 571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000107.1 Genbank region 1 571 . + . ID=PTQV01000107.1:1..571;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000107.1 Genbank gene 1 200 . + . ID=gene-C5O68_12015;Name=C5O68_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12015;partial=true;start_range=.,1 PTQV01000107.1 Protein Homology CDS 1 200 . + 2 ID=cds-RJP77474.1;Parent=gene-C5O68_12015;Dbxref=NCBI_GP:RJP77474.1;Name=RJP77474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_12015;partial=true;product=IS630 family transposase;protein_id=RJP77474.1;start_range=.,1;transl_table=11 PTQV01000107.1 Genbank pseudogene 199 357 . + . ID=gene-C5O68_12020;Name=C5O68_12020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12020;pseudo=true PTQV01000107.1 Protein Homology CDS 199 357 . + 0 ID=cds-C5O68_12020;Parent=gene-C5O68_12020;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014621725.1;locus_tag=C5O68_12020;product=ISL3 family transposase;pseudo=true;transl_table=11 PTQV01000107.1 Genbank gene 474 547 . - . ID=gene-C5O68_12025;Name=C5O68_12025;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12025 PTQV01000107.1 tRNAscan-SE tRNA 474 547 . - . ID=rna-C5O68_12025;Parent=gene-C5O68_12025;anticodon=(pos:complement(511..513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12025;product=tRNA-Asn PTQV01000107.1 tRNAscan-SE exon 474 547 . - . ID=exon-C5O68_12025-1;Parent=rna-C5O68_12025;anticodon=(pos:complement(511..513));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12025;product=tRNA-Asn ##sequence-region PTQV01000108.1 1 1883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000108.1 Genbank region 1 1883 . + . ID=PTQV01000108.1:1..1883;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000108.1 Genbank gene 345 956 . - . ID=gene-C5O68_12030;Name=C5O68_12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12030 PTQV01000108.1 Protein Homology CDS 345 956 . - 0 ID=cds-RJP77454.1;Parent=gene-C5O68_12030;Dbxref=NCBI_GP:RJP77454.1;Name=RJP77454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=C5O68_12030;product=hypothetical protein;protein_id=RJP77454.1;transl_table=11 PTQV01000108.1 Genbank gene 1528 1883 . - . ID=gene-C5O68_12035;Name=C5O68_12035;end_range=1883,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12035;partial=true PTQV01000108.1 GeneMarkS+ CDS 1528 1883 . - 2 ID=cds-RJP77453.1;Parent=gene-C5O68_12035;Dbxref=NCBI_GP:RJP77453.1;Name=RJP77453.1;end_range=1883,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_12035;partial=true;product=peptidase;protein_id=RJP77453.1;transl_table=11 ##sequence-region PTQV01000010.1 1 6053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000010.1 Genbank region 1 6053 . + . ID=PTQV01000010.1:1..6053;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000010.1 Genbank gene 1 169 . - . ID=gene-C5O68_01660;Name=C5O68_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01660;partial=true;start_range=.,1 PTQV01000010.1 Protein Homology CDS 1 169 . - 0 ID=cds-RJP84021.1;Parent=gene-C5O68_01660;Dbxref=NCBI_GP:RJP84021.1;Name=RJP84021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=C5O68_01660;partial=true;product=transposase;protein_id=RJP84021.1;start_range=.,1;transl_table=11 PTQV01000010.1 Genbank gene 442 678 . + . ID=gene-C5O68_01665;Name=C5O68_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01665 PTQV01000010.1 Protein Homology CDS 442 678 . + 0 ID=cds-RJP84014.1;Parent=gene-C5O68_01665;Dbxref=NCBI_GP:RJP84014.1;Name=RJP84014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445191.1;locus_tag=C5O68_01665;product=recombinase RecX;protein_id=RJP84014.1;transl_table=11 PTQV01000010.1 Genbank gene 909 2195 . + . ID=gene-C5O68_01670;Name=C5O68_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01670 PTQV01000010.1 Protein Homology CDS 909 2195 . + 0 ID=cds-RJP84015.1;Parent=gene-C5O68_01670;Dbxref=NCBI_GP:RJP84015.1;Name=RJP84015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445192.1;locus_tag=C5O68_01670;product=adenylosuccinate synthase;protein_id=RJP84015.1;transl_table=11 PTQV01000010.1 Genbank gene 2395 2862 . + . ID=gene-C5O68_01675;Name=C5O68_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01675 PTQV01000010.1 Protein Homology CDS 2395 2862 . + 0 ID=cds-RJP84016.1;Parent=gene-C5O68_01675;Dbxref=NCBI_GP:RJP84016.1;Name=RJP84016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357616.1;locus_tag=C5O68_01675;product=tRNA-specific adenosine deaminase;protein_id=RJP84016.1;transl_table=11 PTQV01000010.1 Genbank gene 2895 2990 . + . ID=gene-C5O68_01680;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=C5O68_01680 PTQV01000010.1 cmsearch SRP_RNA 2895 2990 . + . ID=rna-C5O68_01680;Parent=gene-C5O68_01680;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_01680;product=signal recognition particle sRNA small type PTQV01000010.1 cmsearch exon 2895 2990 . + . ID=exon-C5O68_01680-1;Parent=rna-C5O68_01680;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_01680;product=signal recognition particle sRNA small type PTQV01000010.1 Genbank gene 3050 3493 . + . ID=gene-C5O68_01685;Name=C5O68_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01685 PTQV01000010.1 Protein Homology CDS 3050 3493 . + 0 ID=cds-RJP84017.1;Parent=gene-C5O68_01685;Dbxref=NCBI_GP:RJP84017.1;Name=RJP84017.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445194.1;locus_tag=C5O68_01685;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=RJP84017.1;transl_table=11 PTQV01000010.1 Genbank gene 3432 4010 . + . ID=gene-C5O68_01690;Name=C5O68_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01690 PTQV01000010.1 Protein Homology CDS 3432 4010 . + 0 ID=cds-RJP84018.1;Parent=gene-C5O68_01690;Dbxref=NCBI_GP:RJP84018.1;Name=RJP84018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357618.1;locus_tag=C5O68_01690;product=histidine phosphatase family protein;protein_id=RJP84018.1;transl_table=11 PTQV01000010.1 Genbank gene 4024 5385 . + . ID=gene-C5O68_01695;Name=C5O68_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01695 PTQV01000010.1 Protein Homology CDS 4024 5385 . + 0 ID=cds-RJP84019.1;Parent=gene-C5O68_01695;Dbxref=NCBI_GP:RJP84019.1;Name=RJP84019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006155545.1;locus_tag=C5O68_01695;product=DNA repair protein RadA;protein_id=RJP84019.1;transl_table=11 PTQV01000010.1 Genbank gene 5389 5955 . + . ID=gene-C5O68_01700;Name=C5O68_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01700 PTQV01000010.1 Protein Homology CDS 5389 5955 . + 0 ID=cds-RJP84020.1;Parent=gene-C5O68_01700;Dbxref=NCBI_GP:RJP84020.1;Name=RJP84020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357620.1;locus_tag=C5O68_01700;product=carbonic anhydrase;protein_id=RJP84020.1;transl_table=11 ##sequence-region PTQV01000109.1 1 14696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000109.1 Genbank region 1 14696 . + . ID=PTQV01000109.1:1..14696;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000109.1 Genbank gene 122 1537 . + . ID=gene-C5O68_12040;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=C5O68_12040 PTQV01000109.1 Protein Homology CDS 122 1537 . + 0 ID=cds-RJP77405.1;Parent=gene-C5O68_12040;Dbxref=NCBI_GP:RJP77405.1;Name=RJP77405.1;gbkey=CDS;gene=ply;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359331.1;locus_tag=C5O68_12040;product=thiol-activated toxin pneumolysin;protein_id=RJP77405.1;transl_table=11 PTQV01000109.1 Genbank gene 2212 2928 . + . ID=gene-C5O68_12045;Name=C5O68_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12045 PTQV01000109.1 Protein Homology CDS 2212 2928 . + 0 ID=cds-RJP77406.1;Parent=gene-C5O68_12045;Dbxref=NCBI_GP:RJP77406.1;Name=RJP77406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604432.1;locus_tag=C5O68_12045;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=RJP77406.1;transl_table=11 PTQV01000109.1 Genbank gene 2944 3039 . + . ID=gene-C5O68_12050;Name=C5O68_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12050 PTQV01000109.1 Protein Homology CDS 2944 3039 . + 0 ID=cds-RJP77407.1;Parent=gene-C5O68_12050;Dbxref=NCBI_GP:RJP77407.1;Name=RJP77407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809295.1;locus_tag=C5O68_12050;product=single-stranded DNA-binding protein;protein_id=RJP77407.1;transl_table=11 PTQV01000109.1 Genbank gene 3052 3522 . + . ID=gene-C5O68_12055;Name=C5O68_12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12055 PTQV01000109.1 Protein Homology CDS 3052 3522 . + 0 ID=cds-RJP77408.1;Parent=gene-C5O68_12055;Dbxref=NCBI_GP:RJP77408.1;Name=RJP77408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517879.1;locus_tag=C5O68_12055;product=MarR family transcriptional regulator;protein_id=RJP77408.1;transl_table=11 PTQV01000109.1 Genbank gene 3497 5266 . + . ID=gene-C5O68_12060;Name=C5O68_12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12060 PTQV01000109.1 Protein Homology CDS 3497 5266 . + 0 ID=cds-RJP77409.1;Parent=gene-C5O68_12060;Dbxref=NCBI_GP:RJP77409.1;Name=RJP77409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446935.1;locus_tag=C5O68_12060;product=multidrug ABC transporter ATP-binding protein;protein_id=RJP77409.1;transl_table=11 PTQV01000109.1 Genbank gene 5256 7016 . + . ID=gene-C5O68_12065;Name=C5O68_12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12065 PTQV01000109.1 Protein Homology CDS 5256 7016 . + 0 ID=cds-RJP77410.1;Parent=gene-C5O68_12065;Dbxref=NCBI_GP:RJP77410.1;Name=RJP77410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446934.1;locus_tag=C5O68_12065;product=ABC transporter;protein_id=RJP77410.1;transl_table=11 PTQV01000109.1 Genbank gene 7082 7444 . + . ID=gene-C5O68_12070;Name=C5O68_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12070 PTQV01000109.1 Protein Homology CDS 7082 7444 . + 0 ID=cds-RJP77411.1;Parent=gene-C5O68_12070;Dbxref=NCBI_GP:RJP77411.1;Name=RJP77411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359325.1;locus_tag=C5O68_12070;product=DUF2200 domain-containing protein;protein_id=RJP77411.1;transl_table=11 PTQV01000109.1 Genbank gene 7441 7944 . + . ID=gene-C5O68_12075;Name=C5O68_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12075 PTQV01000109.1 Protein Homology CDS 7441 7944 . + 0 ID=cds-RJP77412.1;Parent=gene-C5O68_12075;Dbxref=NCBI_GP:RJP77412.1;Name=RJP77412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359324.1;locus_tag=C5O68_12075;product=PAP2 family protein;protein_id=RJP77412.1;transl_table=11 PTQV01000109.1 Genbank pseudogene 7990 8058 . - . ID=gene-C5O68_12080;Name=C5O68_12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12080;pseudo=true PTQV01000109.1 Protein Homology CDS 7990 8058 . - 0 ID=cds-C5O68_12080;Parent=gene-C5O68_12080;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_12080;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000109.1 Genbank gene 8164 8610 . + . ID=gene-C5O68_12085;Name=C5O68_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12085 PTQV01000109.1 Protein Homology CDS 8164 8610 . + 0 ID=cds-RJP77413.1;Parent=gene-C5O68_12085;Dbxref=NCBI_GP:RJP77413.1;Name=RJP77413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446932.1;locus_tag=C5O68_12085;product=DNA-binding response regulator;protein_id=RJP77413.1;transl_table=11 PTQV01000109.1 Genbank gene 8615 9289 . + . ID=gene-C5O68_12090;Name=C5O68_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12090 PTQV01000109.1 Protein Homology CDS 8615 9289 . + 0 ID=cds-RJP77414.1;Parent=gene-C5O68_12090;Dbxref=NCBI_GP:RJP77414.1;Name=RJP77414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446931.1;locus_tag=C5O68_12090;product=hypothetical protein;protein_id=RJP77414.1;transl_table=11 PTQV01000109.1 Genbank gene 9492 9725 . + . ID=gene-C5O68_12095;Name=C5O68_12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12095 PTQV01000109.1 Protein Homology CDS 9492 9725 . + 0 ID=cds-RJP77422.1;Parent=gene-C5O68_12095;Dbxref=NCBI_GP:RJP77422.1;Name=RJP77422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647592.1;locus_tag=C5O68_12095;product=choline-binding protein A;protein_id=RJP77422.1;transl_table=11 PTQV01000109.1 Genbank pseudogene 9695 9829 . - . ID=gene-C5O68_12100;Name=C5O68_12100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12100;pseudo=true PTQV01000109.1 Protein Homology CDS 9695 9829 . - 0 ID=cds-C5O68_12100;Parent=gene-C5O68_12100;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_12100;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000109.1 Genbank gene 9923 10222 . + . ID=gene-C5O68_12105;Name=C5O68_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12105 PTQV01000109.1 Protein Homology CDS 9923 10222 . + 0 ID=cds-RJP77415.1;Parent=gene-C5O68_12105;Dbxref=NCBI_GP:RJP77415.1;Name=RJP77415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445543.1;locus_tag=C5O68_12105;product=DUF4651 domain-containing protein;protein_id=RJP77415.1;transl_table=11 PTQV01000109.1 Genbank gene 10219 10536 . + . ID=gene-C5O68_12110;Name=C5O68_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12110 PTQV01000109.1 Protein Homology CDS 10219 10536 . + 0 ID=cds-RJP77416.1;Parent=gene-C5O68_12110;Dbxref=NCBI_GP:RJP77416.1;Name=RJP77416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445544.1;locus_tag=C5O68_12110;product=thioredoxin;protein_id=RJP77416.1;transl_table=11 PTQV01000109.1 Genbank gene 10551 11177 . + . ID=gene-C5O68_12115;Name=C5O68_12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12115 PTQV01000109.1 Protein Homology CDS 10551 11177 . + 0 ID=cds-RJP77417.1;Parent=gene-C5O68_12115;Dbxref=NCBI_GP:RJP77417.1;Name=RJP77417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359318.1;locus_tag=C5O68_12115;product=DUF4479 domain-containing protein;protein_id=RJP77417.1;transl_table=11 PTQV01000109.1 Genbank gene 11219 11980 . + . ID=gene-C5O68_12120;Name=C5O68_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12120 PTQV01000109.1 Protein Homology CDS 11219 11980 . + 0 ID=cds-RJP77418.1;Parent=gene-C5O68_12120;Dbxref=NCBI_GP:RJP77418.1;Name=RJP77418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107790.1;locus_tag=C5O68_12120;product=NAD(P)-dependent oxidoreductase;protein_id=RJP77418.1;transl_table=11 PTQV01000109.1 Genbank gene 12057 12452 . + . ID=gene-C5O68_12125;Name=C5O68_12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12125 PTQV01000109.1 Protein Homology CDS 12057 12452 . + 0 ID=cds-RJP77419.1;Parent=gene-C5O68_12125;Dbxref=NCBI_GP:RJP77419.1;Name=RJP77419.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359316.1;locus_tag=C5O68_12125;product=single-stranded DNA-binding protein;protein_id=RJP77419.1;transl_table=11 PTQV01000109.1 Genbank gene 12608 12892 . + . ID=gene-C5O68_12130;Name=C5O68_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12130 PTQV01000109.1 Protein Homology CDS 12608 12892 . + 0 ID=cds-RJP77420.1;Parent=gene-C5O68_12130;Dbxref=NCBI_GP:RJP77420.1;Name=RJP77420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359315.1;locus_tag=C5O68_12130;product=co-chaperone GroES;protein_id=RJP77420.1;transl_table=11 PTQV01000109.1 Genbank gene 12908 14530 . + . ID=gene-C5O68_12135;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=C5O68_12135 PTQV01000109.1 Protein Homology CDS 12908 14530 . + 0 ID=cds-RJP77421.1;Parent=gene-C5O68_12135;Dbxref=NCBI_GP:RJP77421.1;Name=RJP77421.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005591590.1;locus_tag=C5O68_12135;product=chaperonin GroEL;protein_id=RJP77421.1;transl_table=11 ##sequence-region PTQV01000110.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000110.1 Genbank region 1 783 . + . ID=PTQV01000110.1:1..783;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000110.1 Genbank pseudogene 300 550 . + . ID=gene-C5O68_12140;Name=C5O68_12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12140;pseudo=true PTQV01000110.1 Protein Homology CDS 300 550 . + 0 ID=cds-C5O68_12140;Parent=gene-C5O68_12140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855921.1;locus_tag=C5O68_12140;product=integrase;pseudo=true;transl_table=11 ##sequence-region PTQV01000111.1 1 5182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000111.1 Genbank region 1 5182 . + . ID=PTQV01000111.1:1..5182;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000111.1 Genbank gene 1 417 . + . ID=gene-C5O68_12145;Name=C5O68_12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12145 PTQV01000111.1 Protein Homology CDS 1 417 . + 0 ID=cds-RJP77367.1;Parent=gene-C5O68_12145;Dbxref=NCBI_GP:RJP77367.1;Name=RJP77367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017282.1;locus_tag=C5O68_12145;product=choline-binding protein C;protein_id=RJP77367.1;transl_table=11 PTQV01000111.1 Genbank pseudogene 430 742 . + . ID=gene-C5O68_12150;Name=C5O68_12150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12150;pseudo=true PTQV01000111.1 Protein Homology CDS 430 742 . + 0 ID=cds-C5O68_12150;Parent=gene-C5O68_12150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725077.1;locus_tag=C5O68_12150;product=choline-binding protein C;pseudo=true;transl_table=11 PTQV01000111.1 Genbank pseudogene 854 1388 . - . ID=gene-C5O68_12155;Name=C5O68_12155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12155;pseudo=true PTQV01000111.1 Protein Homology CDS 854 1388 . - 0 ID=cds-C5O68_12155;Parent=gene-C5O68_12155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=C5O68_12155;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000111.1 Genbank pseudogene 1449 1542 . - . ID=gene-C5O68_12160;Name=C5O68_12160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12160;pseudo=true PTQV01000111.1 Protein Homology CDS 1449 1542 . - 0 ID=cds-C5O68_12160;Parent=gene-C5O68_12160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850150.1;locus_tag=C5O68_12160;product=nuclease;pseudo=true;transl_table=11 PTQV01000111.1 Genbank gene 1833 3179 . + . ID=gene-C5O68_12165;Name=C5O68_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12165 PTQV01000111.1 Protein Homology CDS 1833 3179 . + 0 ID=cds-RJP77368.1;Parent=gene-C5O68_12165;Dbxref=NCBI_GP:RJP77368.1;Name=RJP77368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358774.1;locus_tag=C5O68_12165;product=NADP-specific glutamate dehydrogenase;protein_id=RJP77368.1;transl_table=11 PTQV01000111.1 Genbank gene 3459 3629 . - . ID=gene-C5O68_12170;Name=C5O68_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12170 PTQV01000111.1 Protein Homology CDS 3459 3629 . - 0 ID=cds-RJP77369.1;Parent=gene-C5O68_12170;Dbxref=NCBI_GP:RJP77369.1;Name=RJP77369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358775.1;locus_tag=C5O68_12170;product=hypothetical protein;protein_id=RJP77369.1;transl_table=11 PTQV01000111.1 Genbank pseudogene 3642 4088 . - . ID=gene-C5O68_12175;Name=C5O68_12175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12175;pseudo=true PTQV01000111.1 Protein Homology CDS 3642 4088 . - 0 ID=cds-C5O68_12175;Parent=gene-C5O68_12175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082046.1;locus_tag=C5O68_12175;product=ABC transporter;pseudo=true;transl_table=11 PTQV01000111.1 Genbank pseudogene 4237 5041 . - . ID=gene-C5O68_12180;Name=C5O68_12180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12180;pseudo=true PTQV01000111.1 Protein Homology CDS 4237 5041 . - 0 ID=cds-C5O68_12180;Parent=gene-C5O68_12180;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_12180;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000111.1 Genbank pseudogene 5018 5080 . + . ID=gene-C5O68_12185;Name=C5O68_12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12185;pseudo=true PTQV01000111.1 Protein Homology CDS 5018 5080 . + 0 ID=cds-C5O68_12185;Parent=gene-C5O68_12185;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493529.1;locus_tag=C5O68_12185;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11 ##sequence-region PTQV01000112.1 1 4929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000112.1 Genbank region 1 4929 . + . ID=PTQV01000112.1:1..4929;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000112.1 Genbank gene 1 75 . + . ID=gene-C5O68_12190;Name=C5O68_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12190;partial=true;start_range=.,1 PTQV01000112.1 Protein Homology CDS 1 75 . + 0 ID=cds-RJP77350.1;Parent=gene-C5O68_12190;Dbxref=NCBI_GP:RJP77350.1;Name=RJP77350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812163.1;locus_tag=C5O68_12190;partial=true;product=transcription elongation factor GreA;protein_id=RJP77350.1;start_range=.,1;transl_table=11 PTQV01000112.1 Genbank gene 202 858 . + . ID=gene-C5O68_12195;Name=C5O68_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12195 PTQV01000112.1 Protein Homology CDS 202 858 . + 0 ID=cds-RJP77347.1;Parent=gene-C5O68_12195;Dbxref=NCBI_GP:RJP77347.1;Name=RJP77347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358122.1;locus_tag=C5O68_12195;product=DNA-binding response regulator;protein_id=RJP77347.1;transl_table=11 PTQV01000112.1 Genbank gene 855 2183 . + . ID=gene-C5O68_12200;Name=C5O68_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12200 PTQV01000112.1 Protein Homology CDS 855 2183 . + 0 ID=cds-RJP77348.1;Parent=gene-C5O68_12200;Dbxref=NCBI_GP:RJP77348.1;Name=RJP77348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358123.1;locus_tag=C5O68_12200;product=sensor histidine kinase;protein_id=RJP77348.1;transl_table=11 PTQV01000112.1 Genbank gene 2324 3205 . + . ID=gene-C5O68_12205;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=C5O68_12205 PTQV01000112.1 Protein Homology CDS 2324 3205 . + 0 ID=cds-RJP77349.1;Parent=gene-C5O68_12205;Dbxref=NCBI_GP:RJP77349.1;Name=RJP77349.1;gbkey=CDS;gene=fba;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018994.1;locus_tag=C5O68_12205;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=RJP77349.1;transl_table=11 PTQV01000112.1 Genbank pseudogene 3525 4726 . - . ID=gene-C5O68_12210;Name=C5O68_12210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12210;pseudo=true PTQV01000112.1 Protein Homology CDS 3525 4726 . - 0 ID=cds-C5O68_12210;Parent=gene-C5O68_12210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358125.1;locus_tag=C5O68_12210;product=oxidoreductase;pseudo=true;transl_table=11 ##sequence-region PTQV01000113.1 1 7616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000113.1 Genbank region 1 7616 . + . ID=PTQV01000113.1:1..7616;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000113.1 Genbank gene 175 873 . - . ID=gene-C5O68_12215;Name=C5O68_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12215 PTQV01000113.1 Protein Homology CDS 175 873 . - 0 ID=cds-RJP77280.1;Parent=gene-C5O68_12215;Dbxref=NCBI_GP:RJP77280.1;Name=RJP77280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002389365.1;locus_tag=C5O68_12215;product=restriction endonuclease subunit S;protein_id=RJP77280.1;transl_table=11 PTQV01000113.1 Genbank gene 1395 2462 . - . ID=gene-C5O68_12220;Name=C5O68_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12220 PTQV01000113.1 Protein Homology CDS 1395 2462 . - 0 ID=cds-RJP77277.1;Parent=gene-C5O68_12220;Dbxref=NCBI_GP:RJP77277.1;Name=RJP77277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413037.1;locus_tag=C5O68_12220;product=phage abortive infection protein;protein_id=RJP77277.1;transl_table=11 PTQV01000113.1 Genbank gene 2724 3965 . + . ID=gene-C5O68_12225;Name=C5O68_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12225 PTQV01000113.1 Protein Homology CDS 2724 3965 . + 0 ID=cds-RJP77278.1;Parent=gene-C5O68_12225;Dbxref=NCBI_GP:RJP77278.1;Name=RJP77278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109412.1;locus_tag=C5O68_12225;product=Fic family protein;protein_id=RJP77278.1;transl_table=11 PTQV01000113.1 Genbank gene 4119 7487 . - . ID=gene-C5O68_12230;Name=C5O68_12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12230 PTQV01000113.1 Protein Homology CDS 4119 7487 . - 0 ID=cds-RJP77279.1;Parent=gene-C5O68_12230;Dbxref=NCBI_GP:RJP77279.1;Name=RJP77279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284752.1;locus_tag=C5O68_12230;product=DEAD/DEAH box helicase;protein_id=RJP77279.1;transl_table=11 ##sequence-region PTQV01000114.1 1 495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000114.1 Genbank region 1 495 . + . ID=PTQV01000114.1:1..495;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000114.1 Genbank gene 1 486 . - . ID=gene-C5O68_12235;Name=C5O68_12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12235;partial=true;start_range=.,1 PTQV01000114.1 Protein Homology CDS 1 486 . - 0 ID=cds-RJP77276.1;Parent=gene-C5O68_12235;Dbxref=NCBI_GP:RJP77276.1;Name=RJP77276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13592.4;locus_tag=C5O68_12235;partial=true;product=IS630 family transposase;protein_id=RJP77276.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000115.1 1 3724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000115.1 Genbank region 1 3724 . + . ID=PTQV01000115.1:1..3724;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000115.1 Genbank gene 23 340 . - . ID=gene-C5O68_12240;Name=C5O68_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12240 PTQV01000115.1 Protein Homology CDS 23 340 . - 0 ID=cds-RJP77204.1;Parent=gene-C5O68_12240;Dbxref=NCBI_GP:RJP77204.1;Name=RJP77204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445338.1;locus_tag=C5O68_12240;product=hypothetical protein;protein_id=RJP77204.1;transl_table=11 PTQV01000115.1 Genbank gene 438 1799 . - . ID=gene-C5O68_12245;Name=C5O68_12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12245 PTQV01000115.1 Protein Homology CDS 438 1799 . - 0 ID=cds-RJP77205.1;Parent=gene-C5O68_12245;Dbxref=NCBI_GP:RJP77205.1;Name=RJP77205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242574.1;locus_tag=C5O68_12245;product=cell division protein FtsK;protein_id=RJP77205.1;transl_table=11 PTQV01000115.1 Genbank gene 1762 2004 . - . ID=gene-C5O68_12250;Name=C5O68_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12250 PTQV01000115.1 Protein Homology CDS 1762 2004 . - 0 ID=cds-RJP77206.1;Parent=gene-C5O68_12250;Dbxref=NCBI_GP:RJP77206.1;Name=RJP77206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794049.1;locus_tag=C5O68_12250;product=hypothetical protein;protein_id=RJP77206.1;transl_table=11 PTQV01000115.1 Genbank gene 2067 2390 . - . ID=gene-C5O68_12255;Name=C5O68_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12255 PTQV01000115.1 Protein Homology CDS 2067 2390 . - 0 ID=cds-RJP77207.1;Parent=gene-C5O68_12255;Dbxref=NCBI_GP:RJP77207.1;Name=RJP77207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072660.1;locus_tag=C5O68_12255;product=hypothetical protein;protein_id=RJP77207.1;transl_table=11 PTQV01000115.1 Genbank gene 2567 2926 . - . ID=gene-C5O68_12260;Name=C5O68_12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12260 PTQV01000115.1 Protein Homology CDS 2567 2926 . - 0 ID=cds-RJP77209.1;Parent=gene-C5O68_12260;Dbxref=NCBI_GP:RJP77209.1;Name=RJP77209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234754.1;locus_tag=C5O68_12260;product=hypothetical protein;protein_id=RJP77209.1;transl_table=11 PTQV01000115.1 Genbank gene 3119 3397 . + . ID=gene-C5O68_12265;Name=C5O68_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12265 PTQV01000115.1 Protein Homology CDS 3119 3397 . + 0 ID=cds-RJP77208.1;Parent=gene-C5O68_12265;Dbxref=NCBI_GP:RJP77208.1;Name=RJP77208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000397732.1;locus_tag=C5O68_12265;product=hypothetical protein;protein_id=RJP77208.1;transl_table=11 ##sequence-region PTQV01000116.1 1 3844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000116.1 Genbank region 1 3844 . + . ID=PTQV01000116.1:1..3844;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000116.1 Genbank gene 79 267 . - . ID=gene-C5O68_12270;Name=C5O68_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12270 PTQV01000116.1 Protein Homology CDS 79 267 . - 0 ID=cds-RJP77173.1;Parent=gene-C5O68_12270;Dbxref=NCBI_GP:RJP77173.1;Name=RJP77173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_12270;product=hypothetical protein;protein_id=RJP77173.1;transl_table=11 PTQV01000116.1 Genbank gene 309 539 . - . ID=gene-C5O68_12275;Name=C5O68_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12275 PTQV01000116.1 Protein Homology CDS 309 539 . - 0 ID=cds-RJP77174.1;Parent=gene-C5O68_12275;Dbxref=NCBI_GP:RJP77174.1;Name=RJP77174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359516.1;locus_tag=C5O68_12275;product=hypothetical protein;protein_id=RJP77174.1;transl_table=11 PTQV01000116.1 Genbank gene 557 1198 . - . ID=gene-C5O68_12280;Name=C5O68_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12280 PTQV01000116.1 Protein Homology CDS 557 1198 . - 0 ID=cds-RJP77175.1;Parent=gene-C5O68_12280;Dbxref=NCBI_GP:RJP77175.1;Name=RJP77175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359517.1;locus_tag=C5O68_12280;product=CPBP family intramembrane metalloprotease;protein_id=RJP77175.1;transl_table=11 PTQV01000116.1 Genbank gene 1210 1950 . - . ID=gene-C5O68_12285;Name=C5O68_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12285 PTQV01000116.1 Protein Homology CDS 1210 1950 . - 0 ID=cds-RJP77176.1;Parent=gene-C5O68_12285;Dbxref=NCBI_GP:RJP77176.1;Name=RJP77176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359518.1;locus_tag=C5O68_12285;product=DUF3169 domain-containing protein;protein_id=RJP77176.1;transl_table=11 PTQV01000116.1 Genbank gene 1947 2144 . - . ID=gene-C5O68_12290;Name=C5O68_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12290 PTQV01000116.1 Protein Homology CDS 1947 2144 . - 0 ID=cds-RJP77177.1;Parent=gene-C5O68_12290;Dbxref=NCBI_GP:RJP77177.1;Name=RJP77177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445292.1;locus_tag=C5O68_12290;product=hypothetical protein;protein_id=RJP77177.1;transl_table=11 PTQV01000116.1 Genbank gene 2144 2350 . - . ID=gene-C5O68_12295;Name=C5O68_12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12295 PTQV01000116.1 Protein Homology CDS 2144 2350 . - 0 ID=cds-RJP77178.1;Parent=gene-C5O68_12295;Dbxref=NCBI_GP:RJP77178.1;Name=RJP77178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445291.1;locus_tag=C5O68_12295;product=transcriptional regulator;protein_id=RJP77178.1;transl_table=11 PTQV01000116.1 Genbank gene 2360 2773 . - . ID=gene-C5O68_12300;Name=C5O68_12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12300 PTQV01000116.1 Protein Homology CDS 2360 2773 . - 0 ID=cds-RJP77179.1;Parent=gene-C5O68_12300;Dbxref=NCBI_GP:RJP77179.1;Name=RJP77179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856309.1;locus_tag=C5O68_12300;product=hypothetical protein;protein_id=RJP77179.1;transl_table=11 PTQV01000116.1 Genbank gene 3172 3844 . - . ID=gene-C5O68_12305;Name=C5O68_12305;end_range=3844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12305;partial=true PTQV01000116.1 Protein Homology CDS 3172 3844 . - 1 ID=cds-RJP77180.1;Parent=gene-C5O68_12305;Dbxref=NCBI_GP:RJP77180.1;Name=RJP77180.1;end_range=3844,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=C5O68_12305;partial=true;product=hypothetical protein;protein_id=RJP77180.1;transl_table=11 ##sequence-region PTQV01000117.1 1 4393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000117.1 Genbank region 1 4393 . + . ID=PTQV01000117.1:1..4393;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000117.1 Genbank gene 122 1537 . + . ID=gene-C5O68_12310;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=C5O68_12310 PTQV01000117.1 Protein Homology CDS 122 1537 . + 0 ID=cds-RJP77111.1;Parent=gene-C5O68_12310;Dbxref=NCBI_GP:RJP77111.1;Name=RJP77111.1;gbkey=CDS;gene=ply;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359331.1;locus_tag=C5O68_12310;product=thiol-activated toxin pneumolysin;protein_id=RJP77111.1;transl_table=11 PTQV01000117.1 Genbank gene 1547 2293 . + . ID=gene-C5O68_12315;Name=C5O68_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12315 PTQV01000117.1 Protein Homology CDS 1547 2293 . + 0 ID=cds-RJP77112.1;Parent=gene-C5O68_12315;Dbxref=NCBI_GP:RJP77112.1;Name=RJP77112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399289.1;locus_tag=C5O68_12315;product=BlyA;protein_id=RJP77112.1;transl_table=11 PTQV01000117.1 Genbank gene 2309 2530 . + . ID=gene-C5O68_12320;Name=C5O68_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12320 PTQV01000117.1 Protein Homology CDS 2309 2530 . + 0 ID=cds-RJP77113.1;Parent=gene-C5O68_12320;Dbxref=NCBI_GP:RJP77113.1;Name=RJP77113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398183.1;locus_tag=C5O68_12320;product=surface anchored protein;protein_id=RJP77113.1;transl_table=11 PTQV01000117.1 Genbank gene 2736 4393 . + . ID=gene-C5O68_12325;Name=C5O68_12325;end_range=4393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12325;partial=true PTQV01000117.1 Protein Homology CDS 2736 4393 . + 0 ID=cds-RJP77114.1;Parent=gene-C5O68_12325;Dbxref=NCBI_GP:RJP77114.1;Name=RJP77114.1;end_range=4393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880714.1;locus_tag=C5O68_12325;partial=true;product=hypothetical protein;protein_id=RJP77114.1;transl_table=11 ##sequence-region PTQV01000118.1 1 1278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000118.1 Genbank region 1 1278 . + . ID=PTQV01000118.1:1..1278;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000118.1 Genbank gene 1 1278 . - . ID=gene-C5O68_12330;Name=C5O68_12330;end_range=1278,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12330;partial=true;start_range=.,1 PTQV01000118.1 Protein Homology CDS 1 1278 . - 1 ID=cds-RJP77088.1;Parent=gene-C5O68_12330;Dbxref=NCBI_GP:RJP77088.1;Name=RJP77088.1;end_range=1278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844649.1;locus_tag=C5O68_12330;partial=true;product=peptidase S74;protein_id=RJP77088.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000011.1 1 83310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000011.1 Genbank region 1 83310 . + . ID=PTQV01000011.1:1..83310;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000011.1 Genbank gene 369 8441 . - . ID=gene-C5O68_01705;Name=C5O68_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01705 PTQV01000011.1 Protein Homology CDS 369 8441 . - 0 ID=cds-RJP83935.1;Parent=gene-C5O68_01705;Dbxref=NCBI_GP:RJP83935.1;Name=RJP83935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446639.1;locus_tag=C5O68_01705;product=hyaluronoglucosaminidase;protein_id=RJP83935.1;transl_table=11 PTQV01000011.1 Genbank gene 8567 15310 . - . ID=gene-C5O68_01710;Name=C5O68_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01710 PTQV01000011.1 Protein Homology CDS 8567 15310 . - 0 ID=cds-RJP83936.1;Parent=gene-C5O68_01710;Dbxref=NCBI_GP:RJP83936.1;Name=RJP83936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446640.1;locus_tag=C5O68_01710;product=YSIRK signal domain/LPXTG anchor domain surface protein;protein_id=RJP83936.1;transl_table=11 PTQV01000011.1 Genbank gene 15660 16388 . - . ID=gene-C5O68_01715;Name=C5O68_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01715 PTQV01000011.1 Protein Homology CDS 15660 16388 . - 0 ID=cds-RJP83937.1;Parent=gene-C5O68_01715;Dbxref=NCBI_GP:RJP83937.1;Name=RJP83937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446635.1;locus_tag=C5O68_01715;product=peroxide stress protein YaaA;protein_id=RJP83937.1;transl_table=11 PTQV01000011.1 Genbank gene 16581 16760 . - . ID=gene-C5O68_01720;Name=C5O68_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01720 PTQV01000011.1 Protein Homology CDS 16581 16760 . - 0 ID=cds-RJP83938.1;Parent=gene-C5O68_01720;Dbxref=NCBI_GP:RJP83938.1;Name=RJP83938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446642.1;locus_tag=C5O68_01720;product=DUF3953 domain-containing protein;protein_id=RJP83938.1;transl_table=11 PTQV01000011.1 Genbank gene 16924 18519 . - . ID=gene-C5O68_01725;Name=C5O68_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01725 PTQV01000011.1 Protein Homology CDS 16924 18519 . - 0 ID=cds-RJP83939.1;Parent=gene-C5O68_01725;Dbxref=NCBI_GP:RJP83939.1;Name=RJP83939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359000.1;locus_tag=C5O68_01725;product=hypothetical protein;protein_id=RJP83939.1;transl_table=11 PTQV01000011.1 Genbank gene 18531 18941 . - . ID=gene-C5O68_01730;Name=C5O68_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01730 PTQV01000011.1 Protein Homology CDS 18531 18941 . - 0 ID=cds-RJP83940.1;Parent=gene-C5O68_01730;Dbxref=NCBI_GP:RJP83940.1;Name=RJP83940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359001.1;locus_tag=C5O68_01730;product=peptide deformylase;protein_id=RJP83940.1;transl_table=11 PTQV01000011.1 Genbank pseudogene 19070 19260 . + . ID=gene-C5O68_01735;Name=C5O68_01735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01735;pseudo=true PTQV01000011.1 Protein Homology CDS 19070 19260 . + 0 ID=cds-C5O68_01735;Parent=gene-C5O68_01735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=C5O68_01735;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000011.1 Genbank gene 19247 20044 . - . ID=gene-C5O68_01740;Name=C5O68_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01740 PTQV01000011.1 Protein Homology CDS 19247 20044 . - 0 ID=cds-RJP83941.1;Parent=gene-C5O68_01740;Dbxref=NCBI_GP:RJP83941.1;Name=RJP83941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277412.1;locus_tag=C5O68_01740;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=RJP83941.1;transl_table=11 PTQV01000011.1 Genbank gene 20057 22753 . - . ID=gene-C5O68_01745;Name=C5O68_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01745 PTQV01000011.1 Protein Homology CDS 20057 22753 . - 0 ID=cds-RJP83942.1;Parent=gene-C5O68_01745;Dbxref=NCBI_GP:RJP83942.1;Name=RJP83942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359003.1;locus_tag=C5O68_01745;product=ATPase;protein_id=RJP83942.1;transl_table=11 PTQV01000011.1 Genbank gene 23061 24245 . + . ID=gene-C5O68_01750;Name=C5O68_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01750 PTQV01000011.1 Protein Homology CDS 23061 24245 . + 0 ID=cds-RJP83943.1;Parent=gene-C5O68_01750;Dbxref=NCBI_GP:RJP83943.1;Name=RJP83943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446646.1;locus_tag=C5O68_01750;product=cation-efflux pump;protein_id=RJP83943.1;transl_table=11 PTQV01000011.1 Genbank gene 24283 26154 . - . ID=gene-C5O68_01755;Name=C5O68_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01755 PTQV01000011.1 Protein Homology CDS 24283 26154 . - 0 ID=cds-RJP83944.1;Parent=gene-C5O68_01755;Dbxref=NCBI_GP:RJP83944.1;Name=RJP83944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446647.1;locus_tag=C5O68_01755;product=antibiotic ABC transporter ATP-binding protein;protein_id=RJP83944.1;transl_table=11 PTQV01000011.1 Genbank gene 26151 27350 . - . ID=gene-C5O68_01760;Name=C5O68_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01760 PTQV01000011.1 Protein Homology CDS 26151 27350 . - 0 ID=cds-RJP83945.1;Parent=gene-C5O68_01760;Dbxref=NCBI_GP:RJP83945.1;Name=RJP83945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446648.1;locus_tag=C5O68_01760;product=CCA tRNA nucleotidyltransferase;protein_id=RJP83945.1;transl_table=11 PTQV01000011.1 Genbank gene 27347 28114 . - . ID=gene-C5O68_01765;Name=C5O68_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01765 PTQV01000011.1 Protein Homology CDS 27347 28114 . - 0 ID=cds-RJP83946.1;Parent=gene-C5O68_01765;Dbxref=NCBI_GP:RJP83946.1;Name=RJP83946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359007.1;locus_tag=C5O68_01765;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=RJP83946.1;transl_table=11 PTQV01000011.1 Genbank gene 28278 29126 . - . ID=gene-C5O68_01770;Name=C5O68_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01770 PTQV01000011.1 Protein Homology CDS 28278 29126 . - 0 ID=cds-RJP83947.1;Parent=gene-C5O68_01770;Dbxref=NCBI_GP:RJP83947.1;Name=RJP83947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446650.1;locus_tag=C5O68_01770;product=EDD domain protein;protein_id=RJP83947.1;transl_table=11 PTQV01000011.1 Genbank gene 29128 29502 . - . ID=gene-C5O68_01775;Name=C5O68_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01775 PTQV01000011.1 Protein Homology CDS 29128 29502 . - 0 ID=cds-RJP83948.1;Parent=gene-C5O68_01775;Dbxref=NCBI_GP:RJP83948.1;Name=RJP83948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050081.1;locus_tag=C5O68_01775;product=DUF1149 domain-containing protein;protein_id=RJP83948.1;transl_table=11 PTQV01000011.1 Genbank gene 29576 30928 . - . ID=gene-C5O68_01780;Name=C5O68_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01780 PTQV01000011.1 Protein Homology CDS 29576 30928 . - 0 ID=cds-RJP83949.1;Parent=gene-C5O68_01780;Dbxref=NCBI_GP:RJP83949.1;Name=RJP83949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446652.1;locus_tag=C5O68_01780;product=phosphoglucosamine mutase;protein_id=RJP83949.1;transl_table=11 PTQV01000011.1 Genbank gene 30953 31732 . - . ID=gene-C5O68_01785;Name=C5O68_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01785 PTQV01000011.1 Protein Homology CDS 30953 31732 . - 0 ID=cds-RJP83950.1;Parent=gene-C5O68_01785;Dbxref=NCBI_GP:RJP83950.1;Name=RJP83950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359011.1;locus_tag=C5O68_01785;product=hypothetical protein;protein_id=RJP83950.1;transl_table=11 PTQV01000011.1 Genbank gene 31719 32576 . - . ID=gene-C5O68_01790;Name=C5O68_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01790 PTQV01000011.1 Protein Homology CDS 31719 32576 . - 0 ID=cds-RJP83951.1;Parent=gene-C5O68_01790;Dbxref=NCBI_GP:RJP83951.1;Name=RJP83951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446654.1;locus_tag=C5O68_01790;product=TIGR00159 family protein;protein_id=RJP83951.1;transl_table=11 PTQV01000011.1 Genbank gene 32494 32667 . - . ID=gene-C5O68_01795;Name=C5O68_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01795 PTQV01000011.1 Protein Homology CDS 32494 32667 . - 0 ID=cds-RJP83952.1;Parent=gene-C5O68_01795;Dbxref=NCBI_GP:RJP83952.1;Name=RJP83952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359013.1;locus_tag=C5O68_01795;product=hypothetical protein;protein_id=RJP83952.1;transl_table=11 PTQV01000011.1 Genbank gene 32712 33680 . + . ID=gene-C5O68_01800;Name=C5O68_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01800 PTQV01000011.1 Protein Homology CDS 32712 33680 . + 0 ID=cds-RJP83953.1;Parent=gene-C5O68_01800;Dbxref=NCBI_GP:RJP83953.1;Name=RJP83953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359014.1;locus_tag=C5O68_01800;product=ferredoxin--NADP(+) reductase;protein_id=RJP83953.1;transl_table=11 PTQV01000011.1 Genbank gene 33714 34625 . - . ID=gene-C5O68_01805;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=C5O68_01805 PTQV01000011.1 Protein Homology CDS 33714 34625 . - 0 ID=cds-RJP83954.1;Parent=gene-C5O68_01805;Dbxref=NCBI_GP:RJP83954.1;Name=RJP83954.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446656.1;locus_tag=C5O68_01805;product=DNA-binding protein WhiA;protein_id=RJP83954.1;transl_table=11 PTQV01000011.1 Genbank gene 34622 35599 . - . ID=gene-C5O68_01810;Name=C5O68_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01810 PTQV01000011.1 Protein Homology CDS 34622 35599 . - 0 ID=cds-RJP83955.1;Parent=gene-C5O68_01810;Dbxref=NCBI_GP:RJP83955.1;Name=RJP83955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446657.1;locus_tag=C5O68_01810;product=hypothetical protein;protein_id=RJP83955.1;transl_table=11 PTQV01000011.1 Genbank gene 35596 36486 . - . ID=gene-C5O68_01815;Name=C5O68_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01815 PTQV01000011.1 Protein Homology CDS 35596 36486 . - 0 ID=cds-RJP83956.1;Parent=gene-C5O68_01815;Dbxref=NCBI_GP:RJP83956.1;Name=RJP83956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446658.1;locus_tag=C5O68_01815;product=RNase adapter RapZ;protein_id=RJP83956.1;transl_table=11 PTQV01000011.1 Genbank gene 36538 36918 . - . ID=gene-C5O68_01820;Name=C5O68_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01820 PTQV01000011.1 Protein Homology CDS 36538 36918 . - 0 ID=cds-RJP83957.1;Parent=gene-C5O68_01820;Dbxref=NCBI_GP:RJP83957.1;Name=RJP83957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359018.1;locus_tag=C5O68_01820;product=RidA family protein;protein_id=RJP83957.1;transl_table=11 PTQV01000011.1 Genbank gene 36929 37516 . - . ID=gene-C5O68_01825;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;gene_synonym=yihA,ysxC;locus_tag=C5O68_01825 PTQV01000011.1 Protein Homology CDS 36929 37516 . - 0 ID=cds-RJP83958.1;Parent=gene-C5O68_01825;Dbxref=NCBI_GP:RJP83958.1;Name=RJP83958.1;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035057.1;locus_tag=C5O68_01825;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=RJP83958.1;transl_table=11 PTQV01000011.1 Genbank gene 37525 38757 . - . ID=gene-C5O68_01830;Name=C5O68_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01830 PTQV01000011.1 Protein Homology CDS 37525 38757 . - 0 ID=cds-RJP83959.1;Parent=gene-C5O68_01830;Dbxref=NCBI_GP:RJP83959.1;Name=RJP83959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359020.1;locus_tag=C5O68_01830;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=RJP83959.1;transl_table=11 PTQV01000011.1 Genbank gene 38789 38959 . - . ID=gene-C5O68_01835;Name=C5O68_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01835 PTQV01000011.1 Protein Homology CDS 38789 38959 . - 0 ID=cds-RJP83960.1;Parent=gene-C5O68_01835;Dbxref=NCBI_GP:RJP83960.1;Name=RJP83960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359021.1;locus_tag=C5O68_01835;product=hypothetical protein;protein_id=RJP83960.1;transl_table=11 PTQV01000011.1 Genbank gene 38959 39465 . - . ID=gene-C5O68_01840;Name=C5O68_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01840 PTQV01000011.1 Protein Homology CDS 38959 39465 . - 0 ID=cds-RJP83961.1;Parent=gene-C5O68_01840;Dbxref=NCBI_GP:RJP83961.1;Name=RJP83961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359022.1;locus_tag=C5O68_01840;product=dihydrofolate reductase;protein_id=RJP83961.1;transl_table=11 PTQV01000011.1 Genbank gene 39595 40113 . - . ID=gene-C5O68_01845;Name=C5O68_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01845 PTQV01000011.1 Protein Homology CDS 39595 40113 . - 0 ID=cds-RJP83962.1;Parent=gene-C5O68_01845;Dbxref=NCBI_GP:RJP83962.1;Name=RJP83962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229877.1;locus_tag=C5O68_01845;product=DNA starvation/stationary phase protection protein;protein_id=RJP83962.1;transl_table=11 PTQV01000011.1 Genbank gene 40764 42269 . - . ID=gene-C5O68_01850;Name=C5O68_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01850 PTQV01000011.1 Protein Homology CDS 40764 42269 . - 0 ID=cds-RJP83963.1;Parent=gene-C5O68_01850;Dbxref=NCBI_GP:RJP83963.1;Name=RJP83963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844989.1;locus_tag=C5O68_01850;product=1%2C4-beta-N-acetylmuramidase;protein_id=RJP83963.1;transl_table=11 PTQV01000011.1 Genbank gene 42291 43049 . - . ID=gene-C5O68_01855;Name=C5O68_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01855 PTQV01000011.1 Protein Homology CDS 42291 43049 . - 0 ID=cds-RJP83964.1;Parent=gene-C5O68_01855;Dbxref=NCBI_GP:RJP83964.1;Name=RJP83964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446666.1;locus_tag=C5O68_01855;product=triose-phosphate isomerase;protein_id=RJP83964.1;transl_table=11 PTQV01000011.1 Genbank gene 43147 43824 . - . ID=gene-C5O68_01860;Name=C5O68_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01860 PTQV01000011.1 Protein Homology CDS 43147 43824 . - 0 ID=cds-RJP83965.1;Parent=gene-C5O68_01860;Dbxref=NCBI_GP:RJP83965.1;Name=RJP83965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359026.1;locus_tag=C5O68_01860;product=DNA replication protein DnaD;protein_id=RJP83965.1;transl_table=11 PTQV01000011.1 Genbank gene 43833 44777 . - . ID=gene-C5O68_01865;Name=C5O68_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01865 PTQV01000011.1 Protein Homology CDS 43833 44777 . - 0 ID=cds-RJP83966.1;Parent=gene-C5O68_01865;Dbxref=NCBI_GP:RJP83966.1;Name=RJP83966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446668.1;locus_tag=C5O68_01865;product=homoserine O-succinyltransferase;protein_id=RJP83966.1;transl_table=11 PTQV01000011.1 Genbank gene 44761 44946 . - . ID=gene-C5O68_01870;Name=C5O68_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01870 PTQV01000011.1 Protein Homology CDS 44761 44946 . - 0 ID=cds-RJP84002.1;Parent=gene-C5O68_01870;Dbxref=NCBI_GP:RJP84002.1;Name=RJP84002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002668516.1;locus_tag=C5O68_01870;product=hypothetical protein;protein_id=RJP84002.1;transl_table=11 PTQV01000011.1 Genbank gene 45150 45662 . - . ID=gene-C5O68_01875;Name=C5O68_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01875 PTQV01000011.1 Protein Homology CDS 45150 45662 . - 0 ID=cds-RJP83967.1;Parent=gene-C5O68_01875;Dbxref=NCBI_GP:RJP83967.1;Name=RJP83967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049318.1;locus_tag=C5O68_01875;product=adenine phosphoribosyltransferase;protein_id=RJP83967.1;transl_table=11 PTQV01000011.1 Genbank gene 45934 47064 . - . ID=gene-C5O68_01880;Name=C5O68_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01880 PTQV01000011.1 Protein Homology CDS 45934 47064 . - 0 ID=cds-RJP83968.1;Parent=gene-C5O68_01880;Dbxref=NCBI_GP:RJP83968.1;Name=RJP83968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359030.1;locus_tag=C5O68_01880;product=ABC transporter ATP-binding protein;protein_id=RJP83968.1;transl_table=11 PTQV01000011.1 Genbank gene 47345 47430 . - . ID=gene-C5O68_01885;Name=C5O68_01885;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_01885 PTQV01000011.1 tRNAscan-SE tRNA 47345 47430 . - . ID=rna-C5O68_01885;Parent=gene-C5O68_01885;anticodon=(pos:complement(47394..47396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01885;product=tRNA-Leu PTQV01000011.1 tRNAscan-SE exon 47345 47430 . - . ID=exon-C5O68_01885-1;Parent=rna-C5O68_01885;anticodon=(pos:complement(47394..47396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01885;product=tRNA-Leu PTQV01000011.1 Genbank gene 47511 48086 . - . ID=gene-C5O68_01890;Name=C5O68_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01890 PTQV01000011.1 Protein Homology CDS 47511 48086 . - 0 ID=cds-RJP83969.1;Parent=gene-C5O68_01890;Dbxref=NCBI_GP:RJP83969.1;Name=RJP83969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359031.1;locus_tag=C5O68_01890;product=cysteine hydrolase;protein_id=RJP83969.1;transl_table=11 PTQV01000011.1 Genbank gene 48086 48874 . - . ID=gene-C5O68_01895;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=C5O68_01895 PTQV01000011.1 Protein Homology CDS 48086 48874 . - 0 ID=cds-RJP83970.1;Parent=gene-C5O68_01895;Dbxref=NCBI_GP:RJP83970.1;Name=RJP83970.1;gbkey=CDS;gene=codY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445804.1;locus_tag=C5O68_01895;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=RJP83970.1;transl_table=11 PTQV01000011.1 Genbank gene 49232 50806 . - . ID=gene-C5O68_01900;Name=C5O68_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01900 PTQV01000011.1 Protein Homology CDS 49232 50806 . - 0 ID=cds-RJP83971.1;Parent=gene-C5O68_01900;Dbxref=NCBI_GP:RJP83971.1;Name=RJP83971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445802.1;locus_tag=C5O68_01900;product=ATP-dependent RNA helicase;protein_id=RJP83971.1;transl_table=11 PTQV01000011.1 Genbank gene 51004 52230 . - . ID=gene-C5O68_01905;Name=C5O68_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01905 PTQV01000011.1 Protein Homology CDS 51004 52230 . - 0 ID=cds-RJP83972.1;Parent=gene-C5O68_01905;Dbxref=NCBI_GP:RJP83972.1;Name=RJP83972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359034.1;locus_tag=C5O68_01905;product=MFS transporter;protein_id=RJP83972.1;transl_table=11 PTQV01000011.1 Genbank gene 52423 53739 . + . ID=gene-C5O68_01910;Name=C5O68_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01910 PTQV01000011.1 Protein Homology CDS 52423 53739 . + 0 ID=cds-RJP83973.1;Parent=gene-C5O68_01910;Dbxref=NCBI_GP:RJP83973.1;Name=RJP83973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445799.1;locus_tag=C5O68_01910;product=FAD-containing oxidoreductase;protein_id=RJP83973.1;transl_table=11 PTQV01000011.1 Genbank gene 53951 54847 . - . ID=gene-C5O68_01915;Name=C5O68_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01915 PTQV01000011.1 Protein Homology CDS 53951 54847 . - 0 ID=cds-RJP83974.1;Parent=gene-C5O68_01915;Dbxref=NCBI_GP:RJP83974.1;Name=RJP83974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446452.1;locus_tag=C5O68_01915;product=EamA family transporter;protein_id=RJP83974.1;transl_table=11 PTQV01000011.1 Genbank gene 54856 55791 . - . ID=gene-C5O68_01920;Name=C5O68_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01920 PTQV01000011.1 Protein Homology CDS 54856 55791 . - 0 ID=cds-RJP83975.1;Parent=gene-C5O68_01920;Dbxref=NCBI_GP:RJP83975.1;Name=RJP83975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446453.1;locus_tag=C5O68_01920;product=serine hydrolase;protein_id=RJP83975.1;transl_table=11 PTQV01000011.1 Genbank gene 55788 56513 . - . ID=gene-C5O68_01925;Name=C5O68_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01925 PTQV01000011.1 Protein Homology CDS 55788 56513 . - 0 ID=cds-RJP83976.1;Parent=gene-C5O68_01925;Dbxref=NCBI_GP:RJP83976.1;Name=RJP83976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446454.1;locus_tag=C5O68_01925;product=proteinase;protein_id=RJP83976.1;transl_table=11 PTQV01000011.1 Genbank pseudogene 56597 57183 . - . ID=gene-C5O68_01930;Name=C5O68_01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01930;pseudo=true PTQV01000011.1 Protein Homology CDS 56597 57183 . - 0 ID=cds-C5O68_01930;Parent=gene-C5O68_01930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830652.1;locus_tag=C5O68_01930;product=1-alkyl-2-acetylglycerophosphocholine esterase;pseudo=true;transl_table=11 PTQV01000011.1 Genbank gene 57233 58060 . - . ID=gene-C5O68_01935;Name=C5O68_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01935 PTQV01000011.1 Protein Homology CDS 57233 58060 . - 0 ID=cds-RJP83977.1;Parent=gene-C5O68_01935;Dbxref=NCBI_GP:RJP83977.1;Name=RJP83977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446477.1;locus_tag=C5O68_01935;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP83977.1;transl_table=11 PTQV01000011.1 Genbank pseudogene 58093 58895 . - . ID=gene-C5O68_01940;Name=C5O68_01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01940;pseudo=true PTQV01000011.1 Protein Homology CDS 58093 58895 . - 0 ID=cds-C5O68_01940;Parent=gene-C5O68_01940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_01940;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000011.1 Genbank pseudogene 58932 60102 . - . ID=gene-C5O68_01945;Name=C5O68_01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01945;pseudo=true PTQV01000011.1 Protein Homology CDS 58932 60102 . - 0 ID=cds-C5O68_01945;Parent=gene-C5O68_01945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358469.1;locus_tag=C5O68_01945;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000011.1 Genbank gene 60089 60694 . - . ID=gene-C5O68_01950;Name=C5O68_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01950 PTQV01000011.1 Protein Homology CDS 60089 60694 . - 0 ID=cds-RJP83978.1;Parent=gene-C5O68_01950;Dbxref=NCBI_GP:RJP83978.1;Name=RJP83978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446084.1;locus_tag=C5O68_01950;product=dephospho-CoA kinase;protein_id=RJP83978.1;transl_table=11 PTQV01000011.1 Genbank gene 60694 61518 . - . ID=gene-C5O68_01955;Name=C5O68_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01955 PTQV01000011.1 Protein Homology CDS 60694 61518 . - 0 ID=cds-RJP83979.1;Parent=gene-C5O68_01955;Dbxref=NCBI_GP:RJP83979.1;Name=RJP83979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358466.1;locus_tag=C5O68_01955;product=DNA-formamidopyrimidine glycosylase;protein_id=RJP83979.1;transl_table=11 PTQV01000011.1 Genbank gene 61567 62466 . - . ID=gene-C5O68_01960;Name=C5O68_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01960 PTQV01000011.1 Protein Homology CDS 61567 62466 . - 0 ID=cds-RJP83980.1;Parent=gene-C5O68_01960;Dbxref=NCBI_GP:RJP83980.1;Name=RJP83980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002935752.1;locus_tag=C5O68_01960;product=GTPase Era;protein_id=RJP83980.1;transl_table=11 PTQV01000011.1 Genbank gene 62483 62878 . - . ID=gene-C5O68_01965;Name=C5O68_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01965 PTQV01000011.1 Protein Homology CDS 62483 62878 . - 0 ID=cds-RJP83981.1;Parent=gene-C5O68_01965;Dbxref=NCBI_GP:RJP83981.1;Name=RJP83981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358464.1;locus_tag=C5O68_01965;product=diacylglycerol kinase;protein_id=RJP83981.1;transl_table=11 PTQV01000011.1 Genbank gene 62859 63356 . - . ID=gene-C5O68_01970;Name=C5O68_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01970 PTQV01000011.1 Protein Homology CDS 62859 63356 . - 0 ID=cds-RJP83982.1;Parent=gene-C5O68_01970;Dbxref=NCBI_GP:RJP83982.1;Name=RJP83982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380869.1;locus_tag=C5O68_01970;product=endoribonuclease YbeY;protein_id=RJP83982.1;transl_table=11 PTQV01000011.1 Genbank gene 63461 65116 . + . ID=gene-C5O68_01975;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=C5O68_01975 PTQV01000011.1 Protein Homology CDS 63461 65116 . + 0 ID=cds-RJP83983.1;Parent=gene-C5O68_01975;Dbxref=NCBI_GP:RJP83983.1;Name=RJP83983.1;gbkey=CDS;gene=pavA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446079.1;locus_tag=C5O68_01975;product=fibronectin-binding protein PavA;protein_id=RJP83983.1;transl_table=11 PTQV01000011.1 Genbank gene 65177 67078 . - . ID=gene-C5O68_01980;Name=C5O68_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01980 PTQV01000011.1 Protein Homology CDS 65177 67078 . - 0 ID=cds-RJP83984.1;Parent=gene-C5O68_01980;Dbxref=NCBI_GP:RJP83984.1;Name=RJP83984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358461.1;locus_tag=C5O68_01980;product=endo-beta-N-acetylglucosaminidase;protein_id=RJP83984.1;transl_table=11 PTQV01000011.1 Genbank gene 67120 68058 . - . ID=gene-C5O68_01985;Name=C5O68_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01985 PTQV01000011.1 Protein Homology CDS 67120 68058 . - 0 ID=cds-RJP83985.1;Parent=gene-C5O68_01985;Dbxref=NCBI_GP:RJP83985.1;Name=RJP83985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358460.2;locus_tag=C5O68_01985;product=dihydroorotate dehydrogenase;protein_id=RJP83985.1;transl_table=11 PTQV01000011.1 Genbank gene 68069 68869 . - . ID=gene-C5O68_01990;Name=C5O68_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01990 PTQV01000011.1 Protein Homology CDS 68069 68869 . - 0 ID=cds-RJP83986.1;Parent=gene-C5O68_01990;Dbxref=NCBI_GP:RJP83986.1;Name=RJP83986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358459.1;locus_tag=C5O68_01990;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=RJP83986.1;transl_table=11 PTQV01000011.1 Genbank gene 69119 69499 . - . ID=gene-C5O68_01995;Name=C5O68_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01995 PTQV01000011.1 Protein Homology CDS 69119 69499 . - 0 ID=cds-RJP83987.1;Parent=gene-C5O68_01995;Dbxref=NCBI_GP:RJP83987.1;Name=RJP83987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446074.1;locus_tag=C5O68_01995;product=lactoylglutathione lyase;protein_id=RJP83987.1;transl_table=11 PTQV01000011.1 Genbank gene 69557 69916 . - . ID=gene-C5O68_02000;Name=C5O68_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02000 PTQV01000011.1 Protein Homology CDS 69557 69916 . - 0 ID=cds-RJP83988.1;Parent=gene-C5O68_02000;Dbxref=NCBI_GP:RJP83988.1;Name=RJP83988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019786714.1;locus_tag=C5O68_02000;product=50S ribosomal protein L20;protein_id=RJP83988.1;transl_table=11 PTQV01000011.1 Genbank gene 69968 70168 . - . ID=gene-C5O68_02005;Name=C5O68_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02005 PTQV01000011.1 Protein Homology CDS 69968 70168 . - 0 ID=cds-RJP83989.1;Parent=gene-C5O68_02005;Dbxref=NCBI_GP:RJP83989.1;Name=RJP83989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001125942.1;locus_tag=C5O68_02005;product=50S ribosomal protein L35;protein_id=RJP83989.1;transl_table=11 PTQV01000011.1 Genbank gene 70201 70758 . - . ID=gene-C5O68_02010;Name=C5O68_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02010 PTQV01000011.1 Protein Homology CDS 70201 70758 . - 0 ID=cds-RJP83990.1;Parent=gene-C5O68_02010;Dbxref=NCBI_GP:RJP83990.1;Name=RJP83990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446071.1;locus_tag=C5O68_02010;product=translation initiation factor IF-3;protein_id=RJP83990.1;transl_table=11 PTQV01000011.1 Genbank gene 71033 72217 . - . ID=gene-C5O68_02015;Name=C5O68_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02015 PTQV01000011.1 Protein Homology CDS 71033 72217 . - 0 ID=cds-RJP83991.1;Parent=gene-C5O68_02015;Dbxref=NCBI_GP:RJP83991.1;Name=RJP83991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446070.1;locus_tag=C5O68_02015;product=hypothetical protein;protein_id=RJP83991.1;transl_table=11 PTQV01000011.1 Genbank gene 72221 72808 . - . ID=gene-C5O68_02020;Name=C5O68_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02020 PTQV01000011.1 Protein Homology CDS 72221 72808 . - 0 ID=cds-RJP83992.1;Parent=gene-C5O68_02020;Dbxref=NCBI_GP:RJP83992.1;Name=RJP83992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446069.1;locus_tag=C5O68_02020;product=ABC transporter ATP-binding protein;protein_id=RJP83992.1;transl_table=11 PTQV01000011.1 Genbank gene 72840 73103 . - . ID=gene-C5O68_02025;Name=C5O68_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02025 PTQV01000011.1 Protein Homology CDS 72840 73103 . - 0 ID=cds-RJP83993.1;Parent=gene-C5O68_02025;Dbxref=NCBI_GP:RJP83993.1;Name=RJP83993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009730021.1;locus_tag=C5O68_02025;product=hypothetical protein;protein_id=RJP83993.1;transl_table=11 PTQV01000011.1 Genbank pseudogene 73216 74001 . - . ID=gene-C5O68_02030;Name=C5O68_02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02030;pseudo=true PTQV01000011.1 Protein Homology CDS 73216 74001 . - 0 ID=cds-C5O68_02030;Parent=gene-C5O68_02030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_02030;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000011.1 Genbank pseudogene 74039 74248 . + . ID=gene-C5O68_02035;Name=C5O68_02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02035;pseudo=true PTQV01000011.1 Protein Homology CDS 74039 74248 . + 0 ID=cds-C5O68_02035;Parent=gene-C5O68_02035;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446493.1;locus_tag=C5O68_02035;product=thiamine biosynthesis protein ApbE;pseudo=true;transl_table=11 PTQV01000011.1 Genbank gene 74348 74605 . - . ID=gene-C5O68_02040;Name=C5O68_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02040 PTQV01000011.1 Protein Homology CDS 74348 74605 . - 0 ID=cds-RJP83994.1;Parent=gene-C5O68_02040;Dbxref=NCBI_GP:RJP83994.1;Name=RJP83994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358920.1;locus_tag=C5O68_02040;product=hypothetical protein;protein_id=RJP83994.1;transl_table=11 PTQV01000011.1 Genbank gene 74648 76684 . - . ID=gene-C5O68_02045;Name=C5O68_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02045 PTQV01000011.1 Protein Homology CDS 74648 76684 . - 0 ID=cds-RJP83995.1;Parent=gene-C5O68_02045;Dbxref=NCBI_GP:RJP83995.1;Name=RJP83995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358921.1;locus_tag=C5O68_02045;product=glycine--tRNA ligase subunit beta;protein_id=RJP83995.1;transl_table=11 PTQV01000011.1 Genbank gene 76944 77861 . - . ID=gene-C5O68_02050;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=C5O68_02050 PTQV01000011.1 Protein Homology CDS 76944 77861 . - 0 ID=cds-RJP83996.1;Parent=gene-C5O68_02050;Dbxref=NCBI_GP:RJP83996.1;Name=RJP83996.1;gbkey=CDS;gene=glyQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446498.1;locus_tag=C5O68_02050;product=glycine--tRNA ligase subunit alpha;protein_id=RJP83996.1;transl_table=11 PTQV01000011.1 Genbank gene 78056 78817 . - . ID=gene-C5O68_02055;Name=C5O68_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02055 PTQV01000011.1 Protein Homology CDS 78056 78817 . - 0 ID=cds-RJP83997.1;Parent=gene-C5O68_02055;Dbxref=NCBI_GP:RJP83997.1;Name=RJP83997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035812.1;locus_tag=C5O68_02055;product=elongation factor Tu;protein_id=RJP83997.1;transl_table=11 PTQV01000011.1 Genbank gene 79090 79932 . - . ID=gene-C5O68_02060;Name=C5O68_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02060 PTQV01000011.1 Protein Homology CDS 79090 79932 . - 0 ID=cds-RJP83998.1;Parent=gene-C5O68_02060;Dbxref=NCBI_GP:RJP83998.1;Name=RJP83998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358925.1;locus_tag=C5O68_02060;product=aldo/keto reductase;protein_id=RJP83998.1;transl_table=11 PTQV01000011.1 Genbank gene 80047 81438 . - . ID=gene-C5O68_02065;Name=C5O68_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02065 PTQV01000011.1 Protein Homology CDS 80047 81438 . - 0 ID=cds-RJP83999.1;Parent=gene-C5O68_02065;Dbxref=NCBI_GP:RJP83999.1;Name=RJP83999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358926.1;locus_tag=C5O68_02065;product=peptidoglycan GlcNAc deacetylase;protein_id=RJP83999.1;transl_table=11 PTQV01000011.1 Genbank gene 81673 82272 . - . ID=gene-C5O68_02070;Name=C5O68_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02070 PTQV01000011.1 Protein Homology CDS 81673 82272 . - 0 ID=cds-RJP84000.1;Parent=gene-C5O68_02070;Dbxref=NCBI_GP:RJP84000.1;Name=RJP84000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998388.1;locus_tag=C5O68_02070;product=hypothetical protein;protein_id=RJP84000.1;transl_table=11 PTQV01000011.1 Genbank gene 82891 83292 . - . ID=gene-C5O68_02075;Name=C5O68_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02075 PTQV01000011.1 Protein Homology CDS 82891 83292 . - 0 ID=cds-RJP84001.1;Parent=gene-C5O68_02075;Dbxref=NCBI_GP:RJP84001.1;Name=RJP84001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357624.1;locus_tag=C5O68_02075;product=flagellar assembly protein H domain protein;protein_id=RJP84001.1;transl_table=11 ##sequence-region PTQV01000119.1 1 415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000119.1 Genbank region 1 415 . + . ID=PTQV01000119.1:1..415;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000119.1 Genbank gene 1 415 . - . ID=gene-C5O68_12335;Name=C5O68_12335;end_range=415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12335;partial=true;start_range=.,1 PTQV01000119.1 Protein Homology CDS 1 415 . - 2 ID=cds-RJP77076.1;Parent=gene-C5O68_12335;Dbxref=NCBI_GP:RJP77076.1;Name=RJP77076.1;end_range=415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=C5O68_12335;partial=true;product=transposase;protein_id=RJP77076.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000120.1 1 6655 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000120.1 Genbank region 1 6655 . + . ID=PTQV01000120.1:1..6655;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000120.1 Genbank gene 121 1398 . + . ID=gene-C5O68_12340;Name=C5O68_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12340 PTQV01000120.1 Protein Homology CDS 121 1398 . + 0 ID=cds-RJP77046.1;Parent=gene-C5O68_12340;Dbxref=NCBI_GP:RJP77046.1;Name=RJP77046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359470.1;locus_tag=C5O68_12340;product=gamma-glutamylcysteine synthetase;protein_id=RJP77046.1;transl_table=11 PTQV01000120.1 Genbank gene 1475 2959 . + . ID=gene-C5O68_12345;Name=C5O68_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12345 PTQV01000120.1 Protein Homology CDS 1475 2959 . + 0 ID=cds-RJP77047.1;Parent=gene-C5O68_12345;Dbxref=NCBI_GP:RJP77047.1;Name=RJP77047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445346.1;locus_tag=C5O68_12345;product=threonine synthase;protein_id=RJP77047.1;transl_table=11 PTQV01000120.1 Genbank gene 3020 4300 . + . ID=gene-C5O68_12350;Name=C5O68_12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12350 PTQV01000120.1 Protein Homology CDS 3020 4300 . + 0 ID=cds-RJP77048.1;Parent=gene-C5O68_12350;Dbxref=NCBI_GP:RJP77048.1;Name=RJP77048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445347.1;locus_tag=C5O68_12350;product=MATE family efflux transporter;protein_id=RJP77048.1;transl_table=11 PTQV01000120.1 Genbank gene 4304 4927 . + . ID=gene-C5O68_12355;Name=C5O68_12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12355 PTQV01000120.1 Protein Homology CDS 4304 4927 . + 0 ID=cds-RJP77049.1;Parent=gene-C5O68_12355;Dbxref=NCBI_GP:RJP77049.1;Name=RJP77049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445348.1;locus_tag=C5O68_12355;product=HAD family hydrolase;protein_id=RJP77049.1;transl_table=11 PTQV01000120.1 Genbank gene 5090 6268 . + . ID=gene-C5O68_12360;Name=C5O68_12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12360 PTQV01000120.1 Protein Homology CDS 5090 6268 . + 0 ID=cds-RJP77050.1;Parent=gene-C5O68_12360;Dbxref=NCBI_GP:RJP77050.1;Name=RJP77050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359466.1;locus_tag=C5O68_12360;product=peptidoglycan-binding protein LysM;protein_id=RJP77050.1;transl_table=11 ##sequence-region PTQV01000121.1 1 1103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000121.1 Genbank region 1 1103 . + . ID=PTQV01000121.1:1..1103;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000121.1 Genbank pseudogene 98 1027 . - . ID=gene-C5O68_12365;Name=C5O68_12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12365;pseudo=true PTQV01000121.1 Protein Homology CDS 98 1027 . - 0 ID=cds-C5O68_12365;Parent=gene-C5O68_12365;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398391.1;locus_tag=C5O68_12365;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000122.1 1 780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000122.1 Genbank region 1 780 . + . ID=PTQV01000122.1:1..780;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000122.1 Genbank pseudogene 214 711 . - . ID=gene-C5O68_12370;Name=C5O68_12370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12370;pseudo=true PTQV01000122.1 Protein Homology CDS 214 711 . - 0 ID=cds-C5O68_12370;Parent=gene-C5O68_12370;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646889.1;locus_tag=C5O68_12370;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000123.1 1 376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000123.1 Genbank region 1 376 . + . ID=PTQV01000123.1:1..376;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000123.1 Genbank gene 1 363 . - . ID=gene-C5O68_12375;Name=C5O68_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12375;partial=true;start_range=.,1 PTQV01000123.1 Protein Homology CDS 1 363 . - 0 ID=cds-RJP76968.1;Parent=gene-C5O68_12375;Dbxref=NCBI_GP:RJP76968.1;Name=RJP76968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_12375;partial=true;product=IS630 family transposase;protein_id=RJP76968.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000124.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000124.1 Genbank region 1 387 . + . ID=PTQV01000124.1:1..387;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000124.1 Genbank gene 1 369 . - . ID=gene-C5O68_12380;Name=C5O68_12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12380;partial=true;start_range=.,1 PTQV01000124.1 Protein Homology CDS 1 369 . - 0 ID=cds-RJP76967.1;Parent=gene-C5O68_12380;Dbxref=NCBI_GP:RJP76967.1;Name=RJP76967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_12380;partial=true;product=IS630 family transposase;protein_id=RJP76967.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000125.1 1 4967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000125.1 Genbank region 1 4967 . + . ID=PTQV01000125.1:1..4967;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000125.1 Genbank gene 26 96 . + . ID=gene-C5O68_12385;Name=C5O68_12385;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12385 PTQV01000125.1 tRNAscan-SE tRNA 26 96 . + . ID=rna-C5O68_12385;Parent=gene-C5O68_12385;anticodon=(pos:58..60);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12385;product=tRNA-Gly PTQV01000125.1 tRNAscan-SE exon 26 96 . + . ID=exon-C5O68_12385-1;Parent=rna-C5O68_12385;anticodon=(pos:58..60);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12385;product=tRNA-Gly PTQV01000125.1 Genbank gene 131 204 . + . ID=gene-C5O68_12390;Name=C5O68_12390;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12390 PTQV01000125.1 tRNAscan-SE tRNA 131 204 . + . ID=rna-C5O68_12390;Parent=gene-C5O68_12390;anticodon=(pos:165..167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12390;product=tRNA-Ile PTQV01000125.1 tRNAscan-SE exon 131 204 . + . ID=exon-C5O68_12390-1;Parent=rna-C5O68_12390;anticodon=(pos:165..167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12390;product=tRNA-Ile PTQV01000125.1 Genbank gene 286 375 . + . ID=gene-C5O68_12395;Name=C5O68_12395;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12395 PTQV01000125.1 tRNAscan-SE tRNA 286 375 . + . ID=rna-C5O68_12395;Parent=gene-C5O68_12395;anticodon=(pos:322..324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12395;product=tRNA-Ser PTQV01000125.1 tRNAscan-SE exon 286 375 . + . ID=exon-C5O68_12395-1;Parent=rna-C5O68_12395;anticodon=(pos:322..324);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12395;product=tRNA-Ser PTQV01000125.1 Genbank gene 386 459 . + . ID=gene-C5O68_12400;Name=C5O68_12400;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12400 PTQV01000125.1 tRNAscan-SE tRNA 386 459 . + . ID=rna-C5O68_12400;Parent=gene-C5O68_12400;anticodon=(pos:420..422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12400;product=tRNA-Met PTQV01000125.1 tRNAscan-SE exon 386 459 . + . ID=exon-C5O68_12400-1;Parent=rna-C5O68_12400;anticodon=(pos:420..422);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12400;product=tRNA-Met PTQV01000125.1 Genbank gene 463 535 . + . ID=gene-C5O68_12405;Name=C5O68_12405;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12405 PTQV01000125.1 tRNAscan-SE tRNA 463 535 . + . ID=rna-C5O68_12405;Parent=gene-C5O68_12405;anticodon=(pos:496..498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12405;product=tRNA-Phe PTQV01000125.1 tRNAscan-SE exon 463 535 . + . ID=exon-C5O68_12405-1;Parent=rna-C5O68_12405;anticodon=(pos:496..498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12405;product=tRNA-Phe PTQV01000125.1 Genbank gene 548 628 . + . ID=gene-C5O68_12410;Name=C5O68_12410;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12410 PTQV01000125.1 tRNAscan-SE tRNA 548 628 . + . ID=rna-C5O68_12410;Parent=gene-C5O68_12410;anticodon=(pos:582..584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12410;product=tRNA-Tyr PTQV01000125.1 tRNAscan-SE exon 548 628 . + . ID=exon-C5O68_12410-1;Parent=rna-C5O68_12410;anticodon=(pos:582..584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12410;product=tRNA-Tyr PTQV01000125.1 Genbank gene 633 703 . + . ID=gene-C5O68_12415;Name=C5O68_12415;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12415 PTQV01000125.1 tRNAscan-SE tRNA 633 703 . + . ID=rna-C5O68_12415;Parent=gene-C5O68_12415;anticodon=(pos:665..667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12415;product=tRNA-Trp PTQV01000125.1 tRNAscan-SE exon 633 703 . + . ID=exon-C5O68_12415-1;Parent=rna-C5O68_12415;anticodon=(pos:665..667);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12415;product=tRNA-Trp PTQV01000125.1 Genbank gene 718 790 . + . ID=gene-C5O68_12420;Name=C5O68_12420;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12420 PTQV01000125.1 tRNAscan-SE tRNA 718 790 . + . ID=rna-C5O68_12420;Parent=gene-C5O68_12420;anticodon=(pos:751..753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12420;product=tRNA-His PTQV01000125.1 tRNAscan-SE exon 718 790 . + . ID=exon-C5O68_12420-1;Parent=rna-C5O68_12420;anticodon=(pos:751..753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12420;product=tRNA-His PTQV01000125.1 Genbank gene 804 875 . + . ID=gene-C5O68_12425;Name=C5O68_12425;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12425 PTQV01000125.1 tRNAscan-SE tRNA 804 875 . + . ID=rna-C5O68_12425;Parent=gene-C5O68_12425;anticodon=(pos:836..838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12425;product=tRNA-Gln PTQV01000125.1 tRNAscan-SE exon 804 875 . + . ID=exon-C5O68_12425-1;Parent=rna-C5O68_12425;anticodon=(pos:836..838);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12425;product=tRNA-Gln PTQV01000125.1 Genbank gene 885 968 . + . ID=gene-C5O68_12430;Name=C5O68_12430;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12430 PTQV01000125.1 tRNAscan-SE tRNA 885 968 . + . ID=rna-C5O68_12430;Parent=gene-C5O68_12430;anticodon=(pos:919..921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12430;product=tRNA-Leu PTQV01000125.1 tRNAscan-SE exon 885 968 . + . ID=exon-C5O68_12430-1;Parent=rna-C5O68_12430;anticodon=(pos:919..921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12430;product=tRNA-Leu PTQV01000125.1 Genbank gene 1079 1810 . - . ID=gene-C5O68_12435;Name=C5O68_12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12435 PTQV01000125.1 Protein Homology CDS 1079 1810 . - 0 ID=cds-RJP76883.1;Parent=gene-C5O68_12435;Dbxref=NCBI_GP:RJP76883.1;Name=RJP76883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445330.1;locus_tag=C5O68_12435;product=serine/threonine protein phosphatase;protein_id=RJP76883.1;transl_table=11 PTQV01000125.1 Genbank gene 1803 2039 . - . ID=gene-C5O68_12440;Name=C5O68_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12440 PTQV01000125.1 Protein Homology CDS 1803 2039 . - 0 ID=cds-RJP76884.1;Parent=gene-C5O68_12440;Dbxref=NCBI_GP:RJP76884.1;Name=RJP76884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445331.1;locus_tag=C5O68_12440;product=CopG family transcriptional regulator;protein_id=RJP76884.1;transl_table=11 PTQV01000125.1 Genbank gene 2255 2692 . - . ID=gene-C5O68_12445;Name=C5O68_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12445 PTQV01000125.1 Protein Homology CDS 2255 2692 . - 0 ID=cds-RJP76885.1;Parent=gene-C5O68_12445;Dbxref=NCBI_GP:RJP76885.1;Name=RJP76885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445332.1;locus_tag=C5O68_12445;product=HD domain-containing protein;protein_id=RJP76885.1;transl_table=11 PTQV01000125.1 Genbank gene 2733 3866 . - . ID=gene-C5O68_12450;Name=C5O68_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12450 PTQV01000125.1 Protein Homology CDS 2733 3866 . - 0 ID=cds-RJP76886.1;Parent=gene-C5O68_12450;Dbxref=NCBI_GP:RJP76886.1;Name=RJP76886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445333.1;locus_tag=C5O68_12450;product=site-specific integrase;protein_id=RJP76886.1;transl_table=11 PTQV01000125.1 Genbank gene 3870 4073 . - . ID=gene-C5O68_12455;Name=C5O68_12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12455 PTQV01000125.1 Protein Homology CDS 3870 4073 . - 0 ID=cds-RJP76888.1;Parent=gene-C5O68_12455;Dbxref=NCBI_GP:RJP76888.1;Name=RJP76888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445334.1;locus_tag=C5O68_12455;product=DUF3173 domain-containing protein;protein_id=RJP76888.1;transl_table=11 PTQV01000125.1 Genbank gene 4087 4869 . - . ID=gene-C5O68_12460;Name=C5O68_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12460 PTQV01000125.1 Protein Homology CDS 4087 4869 . - 0 ID=cds-RJP76887.1;Parent=gene-C5O68_12460;Dbxref=NCBI_GP:RJP76887.1;Name=RJP76887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445335.1;locus_tag=C5O68_12460;product=Rep protein;protein_id=RJP76887.1;transl_table=11 ##sequence-region PTQV01000126.1 1 2532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000126.1 Genbank region 1 2532 . + . ID=PTQV01000126.1:1..2532;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000126.1 Genbank gene 8 81 . + . ID=gene-C5O68_12465;Name=C5O68_12465;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12465 PTQV01000126.1 tRNAscan-SE tRNA 8 81 . + . ID=rna-C5O68_12465;Parent=gene-C5O68_12465;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12465;product=tRNA-Pro PTQV01000126.1 tRNAscan-SE exon 8 81 . + . ID=exon-C5O68_12465-1;Parent=rna-C5O68_12465;anticodon=(pos:42..44);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12465;product=tRNA-Pro PTQV01000126.1 Genbank gene 87 160 . + . ID=gene-C5O68_12470;Name=C5O68_12470;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12470 PTQV01000126.1 tRNAscan-SE tRNA 87 160 . + . ID=rna-C5O68_12470;Parent=gene-C5O68_12470;anticodon=(pos:121..123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12470;product=tRNA-Met PTQV01000126.1 tRNAscan-SE exon 87 160 . + . ID=exon-C5O68_12470-1;Parent=rna-C5O68_12470;anticodon=(pos:121..123);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12470;product=tRNA-Met PTQV01000126.1 Genbank gene 174 247 . + . ID=gene-C5O68_12475;Name=C5O68_12475;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12475 PTQV01000126.1 tRNAscan-SE tRNA 174 247 . + . ID=rna-C5O68_12475;Parent=gene-C5O68_12475;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12475;product=tRNA-Met PTQV01000126.1 tRNAscan-SE exon 174 247 . + . ID=exon-C5O68_12475-1;Parent=rna-C5O68_12475;anticodon=(pos:208..210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12475;product=tRNA-Met PTQV01000126.1 Genbank gene 258 347 . + . ID=gene-C5O68_12480;Name=C5O68_12480;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12480 PTQV01000126.1 tRNAscan-SE tRNA 258 347 . + . ID=rna-C5O68_12480;Parent=gene-C5O68_12480;anticodon=(pos:294..296);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12480;product=tRNA-Ser PTQV01000126.1 tRNAscan-SE exon 258 347 . + . ID=exon-C5O68_12480-1;Parent=rna-C5O68_12480;anticodon=(pos:294..296);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12480;product=tRNA-Ser PTQV01000126.1 Genbank gene 358 431 . + . ID=gene-C5O68_12485;Name=C5O68_12485;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12485 PTQV01000126.1 tRNAscan-SE tRNA 358 431 . + . ID=rna-C5O68_12485;Parent=gene-C5O68_12485;anticodon=(pos:392..394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12485;product=tRNA-Met PTQV01000126.1 tRNAscan-SE exon 358 431 . + . ID=exon-C5O68_12485-1;Parent=rna-C5O68_12485;anticodon=(pos:392..394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12485;product=tRNA-Met PTQV01000126.1 Genbank gene 435 507 . + . ID=gene-C5O68_12490;Name=C5O68_12490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12490 PTQV01000126.1 tRNAscan-SE tRNA 435 507 . + . ID=rna-C5O68_12490;Parent=gene-C5O68_12490;anticodon=(pos:468..470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12490;product=tRNA-Phe PTQV01000126.1 tRNAscan-SE exon 435 507 . + . ID=exon-C5O68_12490-1;Parent=rna-C5O68_12490;anticodon=(pos:468..470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12490;product=tRNA-Phe PTQV01000126.1 Genbank gene 527 597 . + . ID=gene-C5O68_12495;Name=C5O68_12495;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12495 PTQV01000126.1 tRNAscan-SE tRNA 527 597 . + . ID=rna-C5O68_12495;Parent=gene-C5O68_12495;anticodon=(pos:559..561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12495;product=tRNA-Gly PTQV01000126.1 tRNAscan-SE exon 527 597 . + . ID=exon-C5O68_12495-1;Parent=rna-C5O68_12495;anticodon=(pos:559..561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12495;product=tRNA-Gly PTQV01000126.1 Genbank gene 633 706 . + . ID=gene-C5O68_12500;Name=C5O68_12500;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12500 PTQV01000126.1 tRNAscan-SE tRNA 633 706 . + . ID=rna-C5O68_12500;Parent=gene-C5O68_12500;anticodon=(pos:667..669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12500;product=tRNA-Ile PTQV01000126.1 tRNAscan-SE exon 633 706 . + . ID=exon-C5O68_12500-1;Parent=rna-C5O68_12500;anticodon=(pos:667..669);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12500;product=tRNA-Ile PTQV01000126.1 Genbank gene 713 800 . + . ID=gene-C5O68_12505;Name=C5O68_12505;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_12505 PTQV01000126.1 tRNAscan-SE tRNA 713 800 . + . ID=rna-C5O68_12505;Parent=gene-C5O68_12505;anticodon=(pos:747..749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12505;product=tRNA-Ser PTQV01000126.1 tRNAscan-SE exon 713 800 . + . ID=exon-C5O68_12505-1;Parent=rna-C5O68_12505;anticodon=(pos:747..749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_12505;product=tRNA-Ser PTQV01000126.1 Genbank gene 926 1861 . - . ID=gene-C5O68_12510;Name=C5O68_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12510 PTQV01000126.1 Protein Homology CDS 926 1861 . - 0 ID=cds-RJP76862.1;Parent=gene-C5O68_12510;Dbxref=NCBI_GP:RJP76862.1;Name=RJP76862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359307.1;locus_tag=C5O68_12510;product=bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor;protein_id=RJP76862.1;transl_table=11 PTQV01000126.1 Genbank pseudogene 1858 2496 . - . ID=gene-C5O68_12515;Name=C5O68_12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12515;pseudo=true PTQV01000126.1 Protein Homology CDS 1858 2496 . - 0 ID=cds-C5O68_12515;Parent=gene-C5O68_12515;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359306.1;locus_tag=C5O68_12515;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PTQV01000127.1 1 1631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000127.1 Genbank region 1 1631 . + . ID=PTQV01000127.1:1..1631;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000127.1 Genbank pseudogene 162 236 . + . ID=gene-C5O68_12520;Name=C5O68_12520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12520;pseudo=true PTQV01000127.1 Protein Homology CDS 162 236 . + 0 ID=cds-C5O68_12520;Parent=gene-C5O68_12520;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837117.1;locus_tag=C5O68_12520;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000127.1 Genbank gene 442 762 . + . ID=gene-C5O68_12525;Name=C5O68_12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12525 PTQV01000127.1 Protein Homology CDS 442 762 . + 0 ID=cds-RJP76732.1;Parent=gene-C5O68_12525;Dbxref=NCBI_GP:RJP76732.1;Name=RJP76732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665424.1;locus_tag=C5O68_12525;product=PadR family transcriptional regulator;protein_id=RJP76732.1;transl_table=11 PTQV01000127.1 Genbank gene 766 1581 . + . ID=gene-C5O68_12530;Name=C5O68_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12530 PTQV01000127.1 Protein Homology CDS 766 1581 . + 0 ID=cds-RJP76733.1;Parent=gene-C5O68_12530;Dbxref=NCBI_GP:RJP76733.1;Name=RJP76733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358292.1;locus_tag=C5O68_12530;product=hypothetical protein;protein_id=RJP76733.1;transl_table=11 ##sequence-region PTQV01000012.1 1 41420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000012.1 Genbank region 1 41420 . + . ID=PTQV01000012.1:1..41420;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000012.1 Genbank gene 1 879 . + . ID=gene-C5O68_02080;Name=C5O68_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02080;partial=true;start_range=.,1 PTQV01000012.1 Protein Homology CDS 1 879 . + 0 ID=cds-RJP83853.1;Parent=gene-C5O68_02080;Dbxref=NCBI_GP:RJP83853.1;Name=RJP83853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966215.1;locus_tag=C5O68_02080;partial=true;product=hypothetical protein;protein_id=RJP83853.1;start_range=.,1;transl_table=11 PTQV01000012.1 Genbank gene 872 1078 . + . ID=gene-C5O68_02085;Name=C5O68_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02085 PTQV01000012.1 Protein Homology CDS 872 1078 . + 0 ID=cds-RJP83854.1;Parent=gene-C5O68_02085;Dbxref=NCBI_GP:RJP83854.1;Name=RJP83854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368698.1;locus_tag=C5O68_02085;product=hypothetical protein;protein_id=RJP83854.1;transl_table=11 PTQV01000012.1 Genbank gene 1075 1608 . + . ID=gene-C5O68_02090;Name=C5O68_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02090 PTQV01000012.1 Protein Homology CDS 1075 1608 . + 0 ID=cds-RJP83855.1;Parent=gene-C5O68_02090;Dbxref=NCBI_GP:RJP83855.1;Name=RJP83855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105679.1;locus_tag=C5O68_02090;product=hypothetical protein;protein_id=RJP83855.1;transl_table=11 PTQV01000012.1 Genbank gene 1764 2042 . + . ID=gene-C5O68_02095;Name=C5O68_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02095 PTQV01000012.1 Protein Homology CDS 1764 2042 . + 0 ID=cds-RJP83856.1;Parent=gene-C5O68_02095;Dbxref=NCBI_GP:RJP83856.1;Name=RJP83856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134981.1;locus_tag=C5O68_02095;product=hypothetical protein;protein_id=RJP83856.1;transl_table=11 PTQV01000012.1 Genbank gene 2058 2534 . + . ID=gene-C5O68_02100;Name=C5O68_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02100 PTQV01000012.1 Protein Homology CDS 2058 2534 . + 0 ID=cds-RJP83857.1;Parent=gene-C5O68_02100;Dbxref=NCBI_GP:RJP83857.1;Name=RJP83857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227060.1;locus_tag=C5O68_02100;product=hypothetical protein;protein_id=RJP83857.1;transl_table=11 PTQV01000012.1 Genbank gene 2541 2861 . + . ID=gene-C5O68_02105;Name=C5O68_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02105 PTQV01000012.1 Protein Homology CDS 2541 2861 . + 0 ID=cds-RJP83858.1;Parent=gene-C5O68_02105;Dbxref=NCBI_GP:RJP83858.1;Name=RJP83858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000381729.1;locus_tag=C5O68_02105;product=hypothetical protein;protein_id=RJP83858.1;transl_table=11 PTQV01000012.1 Genbank gene 2867 3262 . + . ID=gene-C5O68_02110;Name=C5O68_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02110 PTQV01000012.1 Protein Homology CDS 2867 3262 . + 0 ID=cds-RJP83859.1;Parent=gene-C5O68_02110;Dbxref=NCBI_GP:RJP83859.1;Name=RJP83859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067166.1;locus_tag=C5O68_02110;product=hypothetical protein;protein_id=RJP83859.1;transl_table=11 PTQV01000012.1 Genbank gene 3270 3638 . + . ID=gene-C5O68_02115;Name=C5O68_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02115 PTQV01000012.1 GeneMarkS+ CDS 3270 3638 . + 0 ID=cds-RJP83860.1;Parent=gene-C5O68_02115;Dbxref=NCBI_GP:RJP83860.1;Name=RJP83860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_02115;product=hypothetical protein;protein_id=RJP83860.1;transl_table=11 PTQV01000012.1 Genbank gene 3653 3982 . + . ID=gene-C5O68_02120;Name=C5O68_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02120 PTQV01000012.1 Protein Homology CDS 3653 3982 . + 0 ID=cds-RJP83861.1;Parent=gene-C5O68_02120;Dbxref=NCBI_GP:RJP83861.1;Name=RJP83861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191486.1;locus_tag=C5O68_02120;product=phage holin;protein_id=RJP83861.1;transl_table=11 PTQV01000012.1 Genbank gene 3985 4941 . + . ID=gene-C5O68_02125;Name=C5O68_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02125 PTQV01000012.1 Protein Homology CDS 3985 4941 . + 0 ID=cds-RJP83862.1;Parent=gene-C5O68_02125;Dbxref=NCBI_GP:RJP83862.1;Name=RJP83862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=C5O68_02125;product=autolysin;protein_id=RJP83862.1;transl_table=11 PTQV01000012.1 Genbank gene 5237 5494 . + . ID=gene-C5O68_02130;Name=C5O68_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02130 PTQV01000012.1 Protein Homology CDS 5237 5494 . + 0 ID=cds-RJP83863.1;Parent=gene-C5O68_02130;Dbxref=NCBI_GP:RJP83863.1;Name=RJP83863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698518.1;locus_tag=C5O68_02130;product=hypothetical protein;protein_id=RJP83863.1;transl_table=11 PTQV01000012.1 Genbank gene 5496 5762 . + . ID=gene-C5O68_02135;Name=C5O68_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02135 PTQV01000012.1 Protein Homology CDS 5496 5762 . + 0 ID=cds-RJP83864.1;Parent=gene-C5O68_02135;Dbxref=NCBI_GP:RJP83864.1;Name=RJP83864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000962022.1;locus_tag=C5O68_02135;product=competence protein ComGC;protein_id=RJP83864.1;transl_table=11 PTQV01000012.1 Genbank gene 5677 6159 . + . ID=gene-C5O68_02140;Name=C5O68_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02140 PTQV01000012.1 Protein Homology CDS 5677 6159 . + 0 ID=cds-RJP83865.1;Parent=gene-C5O68_02140;Dbxref=NCBI_GP:RJP83865.1;Name=RJP83865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359452.1;locus_tag=C5O68_02140;product=competence protein CglD;protein_id=RJP83865.1;transl_table=11 PTQV01000012.1 Genbank gene 6164 6424 . + . ID=gene-C5O68_02145;Name=C5O68_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02145 PTQV01000012.1 Protein Homology CDS 6164 6424 . + 0 ID=cds-RJP83866.1;Parent=gene-C5O68_02145;Dbxref=NCBI_GP:RJP83866.1;Name=RJP83866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445362.1;locus_tag=C5O68_02145;product=hypothetical protein;protein_id=RJP83866.1;transl_table=11 PTQV01000012.1 Genbank gene 6387 6848 . + . ID=gene-C5O68_02150;Name=C5O68_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02150 PTQV01000012.1 Protein Homology CDS 6387 6848 . + 0 ID=cds-RJP83867.1;Parent=gene-C5O68_02150;Dbxref=NCBI_GP:RJP83867.1;Name=RJP83867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445363.1;locus_tag=C5O68_02150;product=competence protein ComGF;protein_id=RJP83867.1;transl_table=11 PTQV01000012.1 Genbank gene 6826 7239 . + . ID=gene-C5O68_02155;Name=C5O68_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02155 PTQV01000012.1 Protein Homology CDS 6826 7239 . + 0 ID=cds-RJP83868.1;Parent=gene-C5O68_02155;Dbxref=NCBI_GP:RJP83868.1;Name=RJP83868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359450.1;locus_tag=C5O68_02155;product=competence protein ComGF;protein_id=RJP83868.1;transl_table=11 PTQV01000012.1 Genbank pseudogene 7272 7397 . + . ID=gene-C5O68_02160;Name=C5O68_02160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02160;pseudo=true PTQV01000012.1 Protein Homology CDS 7272 7397 . + 0 ID=cds-C5O68_02160;Parent=gene-C5O68_02160;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445365.1;locus_tag=C5O68_02160;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 PTQV01000012.1 Genbank pseudogene 8036 8453 . - . ID=gene-C5O68_02165;Name=C5O68_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02165;pseudo=true PTQV01000012.1 Protein Homology CDS 8036 8453 . - 0 ID=cds-C5O68_02165;Parent=gene-C5O68_02165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284935.1;locus_tag=C5O68_02165;product=N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000012.1 Genbank pseudogene 8603 8710 . - . ID=gene-C5O68_02170;Name=C5O68_02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02170;pseudo=true PTQV01000012.1 Protein Homology CDS 8603 8710 . - 0 ID=cds-C5O68_02170;Parent=gene-C5O68_02170;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_02170;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000012.1 Genbank pseudogene 8813 9509 . - . ID=gene-C5O68_02175;Name=C5O68_02175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02175;pseudo=true PTQV01000012.1 Protein Homology CDS 8813 9509 . - 0 ID=cds-C5O68_02175;Parent=gene-C5O68_02175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_02175;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000012.1 Genbank gene 9854 10807 . + . ID=gene-C5O68_02180;Name=C5O68_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02180 PTQV01000012.1 Protein Homology CDS 9854 10807 . + 0 ID=cds-RJP83869.1;Parent=gene-C5O68_02180;Dbxref=NCBI_GP:RJP83869.1;Name=RJP83869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359447.1;locus_tag=C5O68_02180;product=class I SAM-dependent methyltransferase;protein_id=RJP83869.1;transl_table=11 PTQV01000012.1 Genbank gene 10857 12047 . + . ID=gene-C5O68_02185;Name=C5O68_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02185 PTQV01000012.1 Protein Homology CDS 10857 12047 . + 0 ID=cds-RJP83870.1;Parent=gene-C5O68_02185;Dbxref=NCBI_GP:RJP83870.1;Name=RJP83870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359446.1;locus_tag=C5O68_02185;product=acetate kinase;protein_id=RJP83870.1;transl_table=11 PTQV01000012.1 Genbank gene 12563 13018 . + . ID=gene-C5O68_02190;Name=C5O68_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02190 PTQV01000012.1 Protein Homology CDS 12563 13018 . + 0 ID=cds-RJP83871.1;Parent=gene-C5O68_02190;Dbxref=NCBI_GP:RJP83871.1;Name=RJP83871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446611.1;locus_tag=C5O68_02190;product=hypothetical protein;protein_id=RJP83871.1;transl_table=11 PTQV01000012.1 Genbank gene 13024 13569 . + . ID=gene-C5O68_02195;Name=C5O68_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02195 PTQV01000012.1 GeneMarkS+ CDS 13024 13569 . + 0 ID=cds-RJP83872.1;Parent=gene-C5O68_02195;Dbxref=NCBI_GP:RJP83872.1;Name=RJP83872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_02195;product=hypothetical protein;protein_id=RJP83872.1;transl_table=11 PTQV01000012.1 Genbank gene 13896 14267 . + . ID=gene-C5O68_02200;Name=C5O68_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02200 PTQV01000012.1 Protein Homology CDS 13896 14267 . + 0 ID=cds-RJP83873.1;Parent=gene-C5O68_02200;Dbxref=NCBI_GP:RJP83873.1;Name=RJP83873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359445.1;locus_tag=C5O68_02200;product=ribonuclease P protein component;protein_id=RJP83873.1;transl_table=11 PTQV01000012.1 Genbank gene 14236 15066 . + . ID=gene-C5O68_02205;Name=C5O68_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02205 PTQV01000012.1 Protein Homology CDS 14236 15066 . + 0 ID=cds-RJP83874.1;Parent=gene-C5O68_02205;Dbxref=NCBI_GP:RJP83874.1;Name=RJP83874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359444.1;locus_tag=C5O68_02205;product=hypothetical protein;protein_id=RJP83874.1;transl_table=11 PTQV01000012.1 Genbank gene 15085 16071 . + . ID=gene-C5O68_02210;Name=C5O68_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02210 PTQV01000012.1 Protein Homology CDS 15085 16071 . + 0 ID=cds-RJP83875.1;Parent=gene-C5O68_02210;Dbxref=NCBI_GP:RJP83875.1;Name=RJP83875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359443.1;locus_tag=C5O68_02210;product=protein jag;protein_id=RJP83875.1;transl_table=11 PTQV01000012.1 Genbank gene 16122 16745 . + . ID=gene-C5O68_02215;Name=C5O68_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02215 PTQV01000012.1 Protein Homology CDS 16122 16745 . + 0 ID=cds-RJP83876.1;Parent=gene-C5O68_02215;Dbxref=NCBI_GP:RJP83876.1;Name=RJP83876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359442.1;locus_tag=C5O68_02215;product=ribonuclease P;protein_id=RJP83876.1;transl_table=11 PTQV01000012.1 Genbank gene 16876 18333 . + . ID=gene-C5O68_02220;Name=C5O68_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02220 PTQV01000012.1 Protein Homology CDS 16876 18333 . + 0 ID=cds-RJP83877.1;Parent=gene-C5O68_02220;Dbxref=NCBI_GP:RJP83877.1;Name=RJP83877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359441.2;locus_tag=C5O68_02220;product=PTS ascorbate transporter subunit IIC;protein_id=RJP83877.1;transl_table=11 PTQV01000012.1 Genbank gene 18356 18637 . + . ID=gene-C5O68_02225;Name=C5O68_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02225 PTQV01000012.1 Protein Homology CDS 18356 18637 . + 0 ID=cds-RJP83878.1;Parent=gene-C5O68_02225;Dbxref=NCBI_GP:RJP83878.1;Name=RJP83878.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B functions with enzymes IIC (sgaT%3B ulaA) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359440.1;locus_tag=C5O68_02225;product=PTS ascorbate transporter subunit IIB;protein_id=RJP83878.1;transl_table=11 PTQV01000012.1 Genbank gene 18713 19198 . + . ID=gene-C5O68_02230;Name=C5O68_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02230 PTQV01000012.1 Protein Homology CDS 18713 19198 . + 0 ID=cds-RJP83879.1;Parent=gene-C5O68_02230;Dbxref=NCBI_GP:RJP83879.1;Name=RJP83879.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B functions with enzymes IIB (sgaB%3B ulaB) and IIC (sgaT%3B ulaA) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359439.1;locus_tag=C5O68_02230;product=PTS ascorbate transporter subunit IIA;protein_id=RJP83879.1;transl_table=11 PTQV01000012.1 Genbank gene 19215 19880 . + . ID=gene-C5O68_02235;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=C5O68_02235 PTQV01000012.1 Protein Homology CDS 19215 19880 . + 0 ID=cds-RJP83880.1;Parent=gene-C5O68_02235;Dbxref=NCBI_GP:RJP83880.1;Name=RJP83880.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166733.1;locus_tag=C5O68_02235;product=3-dehydro-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=RJP83880.1;transl_table=11 PTQV01000012.1 Genbank gene 19884 20747 . + . ID=gene-C5O68_02240;Name=C5O68_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02240 PTQV01000012.1 Protein Homology CDS 19884 20747 . + 0 ID=cds-RJP83881.1;Parent=gene-C5O68_02240;Dbxref=NCBI_GP:RJP83881.1;Name=RJP83881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359437.1;locus_tag=C5O68_02240;product=xylulose 5-phosphate 3-epimerase;protein_id=RJP83881.1;transl_table=11 PTQV01000012.1 Genbank gene 20749 21453 . + . ID=gene-C5O68_02245;Name=C5O68_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02245 PTQV01000012.1 Protein Homology CDS 20749 21453 . + 0 ID=cds-RJP83882.1;Parent=gene-C5O68_02245;Dbxref=NCBI_GP:RJP83882.1;Name=RJP83882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359436.1;locus_tag=C5O68_02245;product=L-ribulose-5-phosphate 4-epimerase;protein_id=RJP83882.1;transl_table=11 PTQV01000012.1 Genbank gene 21632 23305 . + . ID=gene-C5O68_02250;Name=C5O68_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02250 PTQV01000012.1 Protein Homology CDS 21632 23305 . + 0 ID=cds-RJP83883.1;Parent=gene-C5O68_02250;Dbxref=NCBI_GP:RJP83883.1;Name=RJP83883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359435.1;locus_tag=C5O68_02250;product=ascorbate 6-phosphate lactonase;protein_id=RJP83883.1;transl_table=11 PTQV01000012.1 Genbank gene 23417 24508 . + . ID=gene-C5O68_02255;Name=C5O68_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02255 PTQV01000012.1 Protein Homology CDS 23417 24508 . + 0 ID=cds-RJP83884.1;Parent=gene-C5O68_02255;Dbxref=NCBI_GP:RJP83884.1;Name=RJP83884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359434.1;locus_tag=C5O68_02255;product=L-ascorbate 6-phosphate lactonase;protein_id=RJP83884.1;transl_table=11 PTQV01000012.1 Genbank gene 24622 26598 . + . ID=gene-C5O68_02260;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=C5O68_02260 PTQV01000012.1 Protein Homology CDS 24622 26598 . + 0 ID=cds-RJP83885.1;Parent=gene-C5O68_02260;Dbxref=NCBI_GP:RJP83885.1;Name=RJP83885.1;gbkey=CDS;gene=tkt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445380.1;locus_tag=C5O68_02260;product=transketolase;protein_id=RJP83885.1;transl_table=11 PTQV01000012.1 Genbank gene 26712 27332 . - . ID=gene-C5O68_02265;Name=C5O68_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02265 PTQV01000012.1 Protein Homology CDS 26712 27332 . - 0 ID=cds-RJP83886.1;Parent=gene-C5O68_02265;Dbxref=NCBI_GP:RJP83886.1;Name=RJP83886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277955.1;locus_tag=C5O68_02265;product=hypothetical protein;protein_id=RJP83886.1;transl_table=11 PTQV01000012.1 Genbank gene 27411 27611 . + . ID=gene-C5O68_02270;Name=C5O68_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02270 PTQV01000012.1 Protein Homology CDS 27411 27611 . + 0 ID=cds-RJP83887.1;Parent=gene-C5O68_02270;Dbxref=NCBI_GP:RJP83887.1;Name=RJP83887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868619.1;locus_tag=C5O68_02270;product=hypothetical protein;protein_id=RJP83887.1;transl_table=11 PTQV01000012.1 Genbank gene 27710 28009 . + . ID=gene-C5O68_02275;Name=C5O68_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02275 PTQV01000012.1 Protein Homology CDS 27710 28009 . + 0 ID=cds-RJP83888.1;Parent=gene-C5O68_02275;Dbxref=NCBI_GP:RJP83888.1;Name=RJP83888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445381.1;locus_tag=C5O68_02275;product=preprotein translocase subunit YajC;protein_id=RJP83888.1;transl_table=11 PTQV01000012.1 Genbank gene 28056 28499 . + . ID=gene-C5O68_02280;Name=C5O68_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02280 PTQV01000012.1 Protein Homology CDS 28056 28499 . + 0 ID=cds-RJP83889.1;Parent=gene-C5O68_02280;Dbxref=NCBI_GP:RJP83889.1;Name=RJP83889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445382.1;locus_tag=C5O68_02280;product=phosphatase;protein_id=RJP83889.1;transl_table=11 PTQV01000012.1 Genbank gene 28486 28896 . + . ID=gene-C5O68_02285;Name=C5O68_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02285 PTQV01000012.1 Protein Homology CDS 28486 28896 . + 0 ID=cds-RJP83890.1;Parent=gene-C5O68_02285;Dbxref=NCBI_GP:RJP83890.1;Name=RJP83890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359430.1;locus_tag=C5O68_02285;product=hypothetical protein;protein_id=RJP83890.1;transl_table=11 PTQV01000012.1 Genbank gene 29196 31847 . + . ID=gene-C5O68_02290;Name=C5O68_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02290 PTQV01000012.1 Protein Homology CDS 29196 31847 . + 0 ID=cds-RJP83891.1;Parent=gene-C5O68_02290;Dbxref=NCBI_GP:RJP83891.1;Name=RJP83891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445384.1;locus_tag=C5O68_02290;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=RJP83891.1;transl_table=11 PTQV01000012.1 Genbank gene 31971 32891 . + . ID=gene-C5O68_02295;Name=C5O68_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02295 PTQV01000012.1 Protein Homology CDS 31971 32891 . + 0 ID=cds-RJP83892.1;Parent=gene-C5O68_02295;Dbxref=NCBI_GP:RJP83892.1;Name=RJP83892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033774.1;locus_tag=C5O68_02295;product=XRE family transcriptional regulator;protein_id=RJP83892.1;transl_table=11 PTQV01000012.1 Genbank pseudogene 32990 33064 . - . ID=gene-C5O68_02300;Name=C5O68_02300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02300;pseudo=true PTQV01000012.1 Protein Homology CDS 32990 33064 . - 0 ID=cds-C5O68_02300;Parent=gene-C5O68_02300;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_02300;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000012.1 Genbank gene 33208 33891 . + . ID=gene-C5O68_02305;Name=C5O68_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02305 PTQV01000012.1 Protein Homology CDS 33208 33891 . + 0 ID=cds-RJP83893.1;Parent=gene-C5O68_02305;Dbxref=NCBI_GP:RJP83893.1;Name=RJP83893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183753.1;locus_tag=C5O68_02305;product=ABC transporter ATP-binding protein;protein_id=RJP83893.1;transl_table=11 PTQV01000012.1 Genbank gene 34181 35161 . + . ID=gene-C5O68_02310;Name=C5O68_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02310 PTQV01000012.1 Protein Homology CDS 34181 35161 . + 0 ID=cds-RJP83901.1;Parent=gene-C5O68_02310;Dbxref=NCBI_GP:RJP83901.1;Name=RJP83901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359418.1;locus_tag=C5O68_02310;product=permease;protein_id=RJP83901.1;transl_table=11 PTQV01000012.1 Genbank gene 35338 36345 . + . ID=gene-C5O68_02315;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=C5O68_02315 PTQV01000012.1 Protein Homology CDS 35338 36345 . + 0 ID=cds-RJP83894.1;Parent=gene-C5O68_02315;Dbxref=NCBI_GP:RJP83894.1;Name=RJP83894.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000260663.1;locus_tag=C5O68_02315;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=RJP83894.1;transl_table=11 PTQV01000012.1 Genbank gene 36414 37289 . - . ID=gene-C5O68_02320;Name=C5O68_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02320 PTQV01000012.1 Protein Homology CDS 36414 37289 . - 0 ID=cds-RJP83895.1;Parent=gene-C5O68_02320;Dbxref=NCBI_GP:RJP83895.1;Name=RJP83895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445386.1;locus_tag=C5O68_02320;product=RluA family pseudouridine synthase;protein_id=RJP83895.1;transl_table=11 PTQV01000012.1 Genbank gene 37376 39571 . + . ID=gene-C5O68_02325;Name=C5O68_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02325 PTQV01000012.1 Protein Homology CDS 37376 39571 . + 0 ID=cds-RJP83896.1;Parent=gene-C5O68_02325;Dbxref=NCBI_GP:RJP83896.1;Name=RJP83896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359415.1;locus_tag=C5O68_02325;product=penicillin-binding protein;protein_id=RJP83896.1;transl_table=11 PTQV01000012.1 Genbank gene 39624 39776 . + . ID=gene-C5O68_02330;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C5O68_02330 PTQV01000012.1 Protein Homology CDS 39624 39776 . + 0 ID=cds-RJP83897.1;Parent=gene-C5O68_02330;Dbxref=NCBI_GP:RJP83897.1;Name=RJP83897.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359414.1;locus_tag=C5O68_02330;product=50S ribosomal protein L33;protein_id=RJP83897.1;transl_table=11 PTQV01000012.1 Genbank gene 39786 39962 . + . ID=gene-C5O68_02335;Name=C5O68_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02335 PTQV01000012.1 Protein Homology CDS 39786 39962 . + 0 ID=cds-RJP83898.1;Parent=gene-C5O68_02335;Dbxref=NCBI_GP:RJP83898.1;Name=RJP83898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359413.1;locus_tag=C5O68_02335;product=preprotein translocase subunit SecE;protein_id=RJP83898.1;transl_table=11 PTQV01000012.1 Genbank gene 40016 40552 . + . ID=gene-C5O68_02340;Name=C5O68_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02340 PTQV01000012.1 Protein Homology CDS 40016 40552 . + 0 ID=cds-RJP83899.1;Parent=gene-C5O68_02340;Dbxref=NCBI_GP:RJP83899.1;Name=RJP83899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376740.1;locus_tag=C5O68_02340;product=transcription termination/antitermination protein NusG;protein_id=RJP83899.1;transl_table=11 PTQV01000012.1 Genbank gene 40673 41152 . + . ID=gene-C5O68_02345;Name=C5O68_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02345 PTQV01000012.1 Protein Homology CDS 40673 41152 . + 0 ID=cds-RJP83900.1;Parent=gene-C5O68_02345;Dbxref=NCBI_GP:RJP83900.1;Name=RJP83900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357607.1;locus_tag=C5O68_02345;product=transcriptional regulator;protein_id=RJP83900.1;transl_table=11 PTQV01000012.1 Genbank gene 41245 41316 . + . ID=gene-C5O68_02350;Name=C5O68_02350;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02350 PTQV01000012.1 tRNAscan-SE tRNA 41245 41316 . + . ID=rna-C5O68_02350;Parent=gene-C5O68_02350;anticodon=(pos:41278..41280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02350;product=tRNA-Glu PTQV01000012.1 tRNAscan-SE exon 41245 41316 . + . ID=exon-C5O68_02350-1;Parent=rna-C5O68_02350;anticodon=(pos:41278..41280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02350;product=tRNA-Glu ##sequence-region PTQV01000128.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000128.1 Genbank region 1 249 . + . ID=PTQV01000128.1:1..249;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000128.1 Genbank gene 1 112 . + . ID=gene-C5O68_12535;Name=C5O68_12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12535;partial=true;start_range=.,1 PTQV01000128.1 Protein Homology CDS 1 112 . + 1 ID=cds-RJP76696.1;Parent=gene-C5O68_12535;Dbxref=NCBI_GP:RJP76696.1;Name=RJP76696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=C5O68_12535;partial=true;product=IS200/IS605 family transposase;protein_id=RJP76696.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000129.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000129.1 Genbank region 1 249 . + . ID=PTQV01000129.1:1..249;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000129.1 Genbank gene 1 112 . + . ID=gene-C5O68_12540;Name=C5O68_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12540;partial=true;start_range=.,1 PTQV01000129.1 Protein Homology CDS 1 112 . + 1 ID=cds-RJP76695.1;Parent=gene-C5O68_12540;Dbxref=NCBI_GP:RJP76695.1;Name=RJP76695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=C5O68_12540;partial=true;product=IS200/IS605 family transposase;protein_id=RJP76695.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000130.1 1 482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000130.1 Genbank region 1 482 . + . ID=PTQV01000130.1:1..482;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 ##sequence-region PTQV01000131.1 1 402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000131.1 Genbank region 1 402 . + . ID=PTQV01000131.1:1..402;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000131.1 Genbank pseudogene 1 402 . - . ID=gene-C5O68_12545;Name=C5O68_12545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12545;pseudo=true PTQV01000131.1 Protein Homology CDS 1 402 . - 2 ID=cds-C5O68_12545;Parent=gene-C5O68_12545;Note=frameshifted%3B internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047224.1;locus_tag=C5O68_12545;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000132.1 1 4447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000132.1 Genbank region 1 4447 . + . ID=PTQV01000132.1:1..4447;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000132.1 Genbank gene 72 731 . - . ID=gene-C5O68_12550;Name=C5O68_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12550 PTQV01000132.1 Protein Homology CDS 72 731 . - 0 ID=cds-RJP76634.1;Parent=gene-C5O68_12550;Dbxref=NCBI_GP:RJP76634.1;Name=RJP76634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446693.1;locus_tag=C5O68_12550;product=amino acid ABC transporter permease;protein_id=RJP76634.1;transl_table=11 PTQV01000132.1 Genbank gene 716 1597 . - . ID=gene-C5O68_12555;Name=C5O68_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12555 PTQV01000132.1 Protein Homology CDS 716 1597 . - 0 ID=cds-RJP76635.1;Parent=gene-C5O68_12555;Dbxref=NCBI_GP:RJP76635.1;Name=RJP76635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229572.1;locus_tag=C5O68_12555;product=phosphate ABC transporter ATP-binding protein;protein_id=RJP76635.1;transl_table=11 PTQV01000132.1 Genbank gene 1762 3996 . + . ID=gene-C5O68_12560;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=C5O68_12560 PTQV01000132.1 Protein Homology CDS 1762 3996 . + 0 ID=cds-RJP76636.1;Parent=gene-C5O68_12560;Dbxref=NCBI_GP:RJP76636.1;Name=RJP76636.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358131.1;locus_tag=C5O68_12560;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=RJP76636.1;transl_table=11 PTQV01000132.1 Genbank pseudogene 4104 4169 . + . ID=gene-C5O68_12565;Name=C5O68_12565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12565;pseudo=true PTQV01000132.1 Protein Homology CDS 4104 4169 . + 0 ID=cds-C5O68_12565;Parent=gene-C5O68_12565;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=C5O68_12565;product=chlorohydrolase;pseudo=true;transl_table=11 ##sequence-region PTQV01000133.1 1 4146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000133.1 Genbank region 1 4146 . + . ID=PTQV01000133.1:1..4146;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000133.1 Genbank pseudogene 1 221 . + . ID=gene-C5O68_12570;Name=C5O68_12570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12570;pseudo=true PTQV01000133.1 Protein Homology CDS 1 221 . + 2 ID=cds-C5O68_12570;Parent=gene-C5O68_12570;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_12570;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000133.1 Genbank pseudogene 324 431 . + . ID=gene-C5O68_12575;Name=C5O68_12575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12575;pseudo=true PTQV01000133.1 Protein Homology CDS 324 431 . + 0 ID=cds-C5O68_12575;Parent=gene-C5O68_12575;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_12575;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000133.1 Genbank pseudogene 420 1164 . - . ID=gene-C5O68_12580;Name=C5O68_12580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12580;pseudo=true PTQV01000133.1 Protein Homology CDS 420 1164 . - 0 ID=cds-C5O68_12580;Parent=gene-C5O68_12580;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358917.1;locus_tag=C5O68_12580;product=thiamine biosynthesis protein ApbE;pseudo=true;transl_table=11 PTQV01000133.1 Genbank gene 1461 2840 . + . ID=gene-C5O68_12585;Name=C5O68_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12585 PTQV01000133.1 Protein Homology CDS 1461 2840 . + 0 ID=cds-RJP76592.1;Parent=gene-C5O68_12585;Dbxref=NCBI_GP:RJP76592.1;Name=RJP76592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358916.1;locus_tag=C5O68_12585;product=NADH oxidase;protein_id=RJP76592.1;transl_table=11 PTQV01000133.1 Genbank gene 3518 3871 . + . ID=gene-C5O68_12590;Name=C5O68_12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12590 PTQV01000133.1 Protein Homology CDS 3518 3871 . + 0 ID=cds-RJP76593.1;Parent=gene-C5O68_12590;Dbxref=NCBI_GP:RJP76593.1;Name=RJP76593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000945719.1;locus_tag=C5O68_12590;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=RJP76593.1;transl_table=11 PTQV01000133.1 Genbank gene 3908 4146 . + . ID=gene-C5O68_12595;Name=C5O68_12595;end_range=4146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12595;partial=true PTQV01000133.1 Protein Homology CDS 3908 4146 . + 0 ID=cds-RJP76594.1;Parent=gene-C5O68_12595;Dbxref=NCBI_GP:RJP76594.1;Name=RJP76594.1;end_range=4146,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=C5O68_12595;partial=true;product=transposase;protein_id=RJP76594.1;transl_table=11 ##sequence-region PTQV01000134.1 1 3324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000134.1 Genbank region 1 3324 . + . ID=PTQV01000134.1:1..3324;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000134.1 Genbank pseudogene 1 618 . + . ID=gene-C5O68_12600;Name=C5O68_12600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12600;pseudo=true PTQV01000134.1 Protein Homology CDS 1 618 . + 2 ID=cds-C5O68_12600;Parent=gene-C5O68_12600;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_12600;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000134.1 Genbank pseudogene 634 864 . + . ID=gene-C5O68_12605;Name=C5O68_12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12605;pseudo=true PTQV01000134.1 Protein Homology CDS 634 864 . + 0 ID=cds-C5O68_12605;Parent=gene-C5O68_12605;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136072.1;locus_tag=C5O68_12605;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 PTQV01000134.1 Genbank gene 985 1929 . + . ID=gene-C5O68_12610;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=C5O68_12610 PTQV01000134.1 Protein Homology CDS 985 1929 . + 0 ID=cds-RJP76567.1;Parent=gene-C5O68_12610;Dbxref=NCBI_GP:RJP76567.1;Name=RJP76567.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446529.1;locus_tag=C5O68_12610;product=mannose-6-phosphate isomerase%2C class I;protein_id=RJP76567.1;transl_table=11 PTQV01000134.1 Genbank pseudogene 1970 2902 . - . ID=gene-C5O68_12615;Name=C5O68_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12615;pseudo=true PTQV01000134.1 Protein Homology CDS 1970 2902 . - 0 ID=cds-C5O68_12615;Parent=gene-C5O68_12615;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446528.1;locus_tag=C5O68_12615;product=sodium-dependent transporter;pseudo=true;transl_table=11 PTQV01000134.1 Genbank gene 3033 3324 . + . ID=gene-C5O68_12620;Name=C5O68_12620;end_range=3324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12620;partial=true PTQV01000134.1 Protein Homology CDS 3033 3324 . + 0 ID=cds-RJP76568.1;Parent=gene-C5O68_12620;Dbxref=NCBI_GP:RJP76568.1;Name=RJP76568.1;end_range=3324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=C5O68_12620;partial=true;product=IS5/IS1182 family transposase;protein_id=RJP76568.1;transl_table=11 ##sequence-region PTQV01000135.1 1 3442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000135.1 Genbank region 1 3442 . + . ID=PTQV01000135.1:1..3442;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000135.1 Genbank gene 1 368 . - . ID=gene-C5O68_12625;Name=C5O68_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12625;partial=true;start_range=.,1 PTQV01000135.1 GeneMarkS+ CDS 1 368 . - 0 ID=cds-RJP76550.1;Parent=gene-C5O68_12625;Dbxref=NCBI_GP:RJP76550.1;Name=RJP76550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_12625;partial=true;product=hypothetical protein;protein_id=RJP76550.1;start_range=.,1;transl_table=11 PTQV01000135.1 Genbank gene 421 549 . - . ID=gene-C5O68_12630;Name=C5O68_12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12630 PTQV01000135.1 Protein Homology CDS 421 549 . - 0 ID=cds-RJP76551.1;Parent=gene-C5O68_12630;Dbxref=NCBI_GP:RJP76551.1;Name=RJP76551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477090.1;locus_tag=C5O68_12630;product=hypothetical protein;protein_id=RJP76551.1;transl_table=11 PTQV01000135.1 Genbank pseudogene 763 1809 . + . ID=gene-C5O68_12635;Name=C5O68_12635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12635;pseudo=true PTQV01000135.1 Protein Homology CDS 763 1809 . + 0 ID=cds-C5O68_12635;Parent=gene-C5O68_12635;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547411.1;locus_tag=C5O68_12635;product=DDE transposase;pseudo=true;transl_table=11 PTQV01000135.1 Genbank gene 2034 3323 . - . ID=gene-C5O68_12640;Name=C5O68_12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12640 PTQV01000135.1 Protein Homology CDS 2034 3323 . - 0 ID=cds-RJP76552.1;Parent=gene-C5O68_12640;Dbxref=NCBI_GP:RJP76552.1;Name=RJP76552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359522.1;locus_tag=C5O68_12640;product=histidine--tRNA ligase;protein_id=RJP76552.1;transl_table=11 ##sequence-region PTQV01000013.1 1 16932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000013.1 Genbank region 1 16932 . + . ID=PTQV01000013.1:1..16932;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000013.1 Genbank gene 1 521 . - . ID=gene-C5O68_02355;Name=C5O68_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02355;partial=true;start_range=.,1 PTQV01000013.1 Protein Homology CDS 1 521 . - 0 ID=cds-RJP83825.1;Parent=gene-C5O68_02355;Dbxref=NCBI_GP:RJP83825.1;Name=RJP83825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447109.1;locus_tag=C5O68_02355;partial=true;product=hypothetical protein;protein_id=RJP83825.1;start_range=.,1;transl_table=11 PTQV01000013.1 Genbank gene 611 844 . - . ID=gene-C5O68_02360;Name=C5O68_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02360 PTQV01000013.1 Protein Homology CDS 611 844 . - 0 ID=cds-RJP83826.1;Parent=gene-C5O68_02360;Dbxref=NCBI_GP:RJP83826.1;Name=RJP83826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438800.1;locus_tag=C5O68_02360;product=XRE family transcriptional regulator;protein_id=RJP83826.1;transl_table=11 PTQV01000013.1 Genbank gene 1002 1958 . + . ID=gene-C5O68_02365;Name=C5O68_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02365 PTQV01000013.1 Protein Homology CDS 1002 1958 . + 0 ID=cds-RJP83827.1;Parent=gene-C5O68_02365;Dbxref=NCBI_GP:RJP83827.1;Name=RJP83827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001107586.1;locus_tag=C5O68_02365;product=XRE family transcriptional regulator;protein_id=RJP83827.1;transl_table=11 PTQV01000013.1 Genbank gene 2107 3111 . + . ID=gene-C5O68_02370;Name=C5O68_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02370 PTQV01000013.1 Protein Homology CDS 2107 3111 . + 0 ID=cds-RJP83828.1;Parent=gene-C5O68_02370;Dbxref=NCBI_GP:RJP83828.1;Name=RJP83828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003055091.1;locus_tag=C5O68_02370;product=DNA-binding protein;protein_id=RJP83828.1;transl_table=11 PTQV01000013.1 Genbank gene 3111 3563 . + . ID=gene-C5O68_02375;Name=C5O68_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02375 PTQV01000013.1 Protein Homology CDS 3111 3563 . + 0 ID=cds-RJP83829.1;Parent=gene-C5O68_02375;Dbxref=NCBI_GP:RJP83829.1;Name=RJP83829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357940.1;locus_tag=C5O68_02375;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=RJP83829.1;transl_table=11 PTQV01000013.1 Genbank gene 3659 4825 . + . ID=gene-C5O68_02380;Name=C5O68_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02380 PTQV01000013.1 Protein Homology CDS 3659 4825 . + 0 ID=cds-RJP83830.1;Parent=gene-C5O68_02380;Dbxref=NCBI_GP:RJP83830.1;Name=RJP83830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704683.1;locus_tag=C5O68_02380;product=site-specific integrase;protein_id=RJP83830.1;transl_table=11 PTQV01000013.1 Genbank gene 4945 6060 . + . ID=gene-C5O68_02385;Name=C5O68_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02385 PTQV01000013.1 Protein Homology CDS 4945 6060 . + 0 ID=cds-RJP83831.1;Parent=gene-C5O68_02385;Dbxref=NCBI_GP:RJP83831.1;Name=RJP83831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357598.1;locus_tag=C5O68_02385;product=redox-regulated ATPase YchF;protein_id=RJP83831.1;transl_table=11 PTQV01000013.1 Genbank gene 6132 6701 . + . ID=gene-C5O68_02390;Name=C5O68_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02390 PTQV01000013.1 Protein Homology CDS 6132 6701 . + 0 ID=cds-RJP83832.1;Parent=gene-C5O68_02390;Dbxref=NCBI_GP:RJP83832.1;Name=RJP83832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357599.1;locus_tag=C5O68_02390;product=aminoacyl-tRNA hydrolase;protein_id=RJP83832.1;transl_table=11 PTQV01000013.1 Genbank gene 6702 10211 . + . ID=gene-C5O68_02395;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=C5O68_02395 PTQV01000013.1 Protein Homology CDS 6702 10211 . + 0 ID=cds-RJP83833.1;Parent=gene-C5O68_02395;Dbxref=NCBI_GP:RJP83833.1;Name=RJP83833.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357600.1;locus_tag=C5O68_02395;product=transcription-repair coupling factor;protein_id=RJP83833.1;transl_table=11 PTQV01000013.1 Genbank gene 10269 10535 . + . ID=gene-C5O68_02400;Name=C5O68_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02400 PTQV01000013.1 Protein Homology CDS 10269 10535 . + 0 ID=cds-RJP83834.1;Parent=gene-C5O68_02400;Dbxref=NCBI_GP:RJP83834.1;Name=RJP83834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357601.1;locus_tag=C5O68_02400;product=RNA-binding S4 domain-containing protein;protein_id=RJP83834.1;transl_table=11 PTQV01000013.1 Genbank gene 10528 10896 . + . ID=gene-C5O68_02405;Name=C5O68_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02405 PTQV01000013.1 Protein Homology CDS 10528 10896 . + 0 ID=cds-RJP83835.1;Parent=gene-C5O68_02405;Dbxref=NCBI_GP:RJP83835.1;Name=RJP83835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445184.1;locus_tag=C5O68_02405;product=septum formation initiator family protein;protein_id=RJP83835.1;transl_table=11 PTQV01000013.1 Genbank gene 11016 12284 . + . ID=gene-C5O68_02410;Name=C5O68_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02410 PTQV01000013.1 Protein Homology CDS 11016 12284 . + 0 ID=cds-RJP83836.1;Parent=gene-C5O68_02410;Dbxref=NCBI_GP:RJP83836.1;Name=RJP83836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445185.1;locus_tag=C5O68_02410;product=serine hydrolase;protein_id=RJP83836.1;transl_table=11 PTQV01000013.1 Genbank gene 12281 13558 . + . ID=gene-C5O68_02415;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=C5O68_02415 PTQV01000013.1 Protein Homology CDS 12281 13558 . + 0 ID=cds-RJP83837.1;Parent=gene-C5O68_02415;Dbxref=NCBI_GP:RJP83837.1;Name=RJP83837.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445186.1;locus_tag=C5O68_02415;product=tRNA lysidine(34) synthetase TilS;protein_id=RJP83837.1;transl_table=11 PTQV01000013.1 Genbank gene 13563 14105 . + . ID=gene-C5O68_02420;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=C5O68_02420 PTQV01000013.1 Protein Homology CDS 13563 14105 . + 0 ID=cds-RJP83838.1;Parent=gene-C5O68_02420;Dbxref=NCBI_GP:RJP83838.1;Name=RJP83838.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445187.1;locus_tag=C5O68_02420;product=hypoxanthine phosphoribosyltransferase;protein_id=RJP83838.1;transl_table=11 PTQV01000013.1 Genbank gene 14121 16079 . + . ID=gene-C5O68_02425;Name=C5O68_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02425 PTQV01000013.1 Protein Homology CDS 14121 16079 . + 0 ID=cds-RJP83839.1;Parent=gene-C5O68_02425;Dbxref=NCBI_GP:RJP83839.1;Name=RJP83839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445188.1;locus_tag=C5O68_02425;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=RJP83839.1;transl_table=11 PTQV01000013.1 Genbank gene 16200 16679 . + . ID=gene-C5O68_02430;Name=C5O68_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02430 PTQV01000013.1 Protein Homology CDS 16200 16679 . + 0 ID=cds-RJP83840.1;Parent=gene-C5O68_02430;Dbxref=NCBI_GP:RJP83840.1;Name=RJP83840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588858.1;locus_tag=C5O68_02430;product=transcriptional regulator;protein_id=RJP83840.1;transl_table=11 ##sequence-region PTQV01000136.1 1 1352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000136.1 Genbank region 1 1352 . + . ID=PTQV01000136.1:1..1352;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000136.1 Genbank gene 1 1352 . - . ID=gene-C5O68_12645;Name=C5O68_12645;end_range=1352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12645;partial=true;start_range=.,1 PTQV01000136.1 GeneMarkS+ CDS 1 1352 . - 0 ID=cds-RJP76436.1;Parent=gene-C5O68_12645;Dbxref=NCBI_GP:RJP76436.1;Name=RJP76436.1;end_range=1352,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_12645;partial=true;product=hypothetical protein;protein_id=RJP76436.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000137.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000137.1 Genbank region 1 804 . + . ID=PTQV01000137.1:1..804;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000137.1 Genbank gene 1 247 . - . ID=gene-C5O68_12650;Name=C5O68_12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12650;partial=true;start_range=.,1 PTQV01000137.1 Protein Homology CDS 1 247 . - 0 ID=cds-RJP76400.1;Parent=gene-C5O68_12650;Dbxref=NCBI_GP:RJP76400.1;Name=RJP76400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=C5O68_12650;partial=true;product=transposase;protein_id=RJP76400.1;start_range=.,1;transl_table=11 PTQV01000137.1 Genbank gene 150 356 . - . ID=gene-C5O68_12655;Name=C5O68_12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12655 PTQV01000137.1 Protein Homology CDS 150 356 . - 0 ID=cds-RJP76399.1;Parent=gene-C5O68_12655;Dbxref=NCBI_GP:RJP76399.1;Name=RJP76399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=C5O68_12655;product=transposase;protein_id=RJP76399.1;transl_table=11 PTQV01000137.1 Genbank pseudogene 410 758 . - . ID=gene-C5O68_12660;Name=C5O68_12660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12660;pseudo=true PTQV01000137.1 Protein Homology CDS 410 758 . - 0 ID=cds-C5O68_12660;Parent=gene-C5O68_12660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001846105.1;locus_tag=C5O68_12660;product=IS66 family insertion sequence hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000138.1 1 733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000138.1 Genbank region 1 733 . + . ID=PTQV01000138.1:1..733;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000138.1 Genbank gene 399 572 . + . ID=gene-C5O68_12665;Name=C5O68_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12665 PTQV01000138.1 Protein Homology CDS 399 572 . + 0 ID=cds-RJP76398.1;Parent=gene-C5O68_12665;Dbxref=NCBI_GP:RJP76398.1;Name=RJP76398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130088.1;locus_tag=C5O68_12665;product=CopG family transcriptional regulator;protein_id=RJP76398.1;transl_table=11 ##sequence-region PTQV01000139.1 1 882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000139.1 Genbank region 1 882 . + . ID=PTQV01000139.1:1..882;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000139.1 Genbank gene 170 868 . + . ID=gene-C5O68_12670;Name=C5O68_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12670 PTQV01000139.1 Protein Homology CDS 170 868 . + 0 ID=cds-RJP76397.1;Parent=gene-C5O68_12670;Dbxref=NCBI_GP:RJP76397.1;Name=RJP76397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446451.1;locus_tag=C5O68_12670;product=GntR family transcriptional regulator;protein_id=RJP76397.1;transl_table=11 ##sequence-region PTQV01000140.1 1 444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000140.1 Genbank region 1 444 . + . ID=PTQV01000140.1:1..444;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000140.1 Genbank gene 1 230 . + . ID=gene-C5O68_12675;Name=C5O68_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12675;partial=true;start_range=.,1 PTQV01000140.1 Protein Homology CDS 1 230 . + 2 ID=cds-RJP76388.1;Parent=gene-C5O68_12675;Dbxref=NCBI_GP:RJP76388.1;Name=RJP76388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358420.1;locus_tag=C5O68_12675;partial=true;product=CPBP family intramembrane metalloprotease;protein_id=RJP76388.1;start_range=.,1;transl_table=11 PTQV01000140.1 Genbank gene 337 444 . - . ID=gene-C5O68_12680;Name=C5O68_12680;end_range=444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12680;partial=true PTQV01000140.1 Protein Homology CDS 337 444 . - 0 ID=cds-RJP76389.1;Parent=gene-C5O68_12680;Dbxref=NCBI_GP:RJP76389.1;Name=RJP76389.1;end_range=444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842783.1;locus_tag=C5O68_12680;partial=true;product=AraC family transcriptional regulator;protein_id=RJP76389.1;transl_table=11 ##sequence-region PTQV01000141.1 1 588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000141.1 Genbank region 1 588 . + . ID=PTQV01000141.1:1..588;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000141.1 Genbank gene 1 582 . + . ID=gene-C5O68_12685;Name=C5O68_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12685;partial=true;start_range=.,1 PTQV01000141.1 Protein Homology CDS 1 582 . + 0 ID=cds-RJP76347.1;Parent=gene-C5O68_12685;Dbxref=NCBI_GP:RJP76347.1;Name=RJP76347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_12685;partial=true;product=IS630 family transposase;protein_id=RJP76347.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000142.1 1 2765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000142.1 Genbank region 1 2765 . + . ID=PTQV01000142.1:1..2765;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000142.1 Genbank gene 13 441 . + . ID=gene-C5O68_12690;Name=C5O68_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12690 PTQV01000142.1 Protein Homology CDS 13 441 . + 0 ID=cds-RJP76323.1;Parent=gene-C5O68_12690;Dbxref=NCBI_GP:RJP76323.1;Name=RJP76323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227462.1;locus_tag=C5O68_12690;product=hypothetical protein;protein_id=RJP76323.1;transl_table=11 PTQV01000142.1 Genbank gene 825 1091 . + . ID=gene-C5O68_12695;Name=C5O68_12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12695 PTQV01000142.1 Protein Homology CDS 825 1091 . + 0 ID=cds-RJP76324.1;Parent=gene-C5O68_12695;Dbxref=NCBI_GP:RJP76324.1;Name=RJP76324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159340.1;locus_tag=C5O68_12695;product=hypothetical protein;protein_id=RJP76324.1;transl_table=11 PTQV01000142.1 Genbank pseudogene 1084 1300 . + . ID=gene-C5O68_12700;Name=C5O68_12700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12700;pseudo=true PTQV01000142.1 Protein Homology CDS 1084 1300 . + 0 ID=cds-C5O68_12700;Parent=gene-C5O68_12700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447106.1;locus_tag=C5O68_12700;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000142.1 Genbank gene 1297 1590 . + . ID=gene-C5O68_12705;Name=C5O68_12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12705 PTQV01000142.1 Protein Homology CDS 1297 1590 . + 0 ID=cds-RJP76325.1;Parent=gene-C5O68_12705;Dbxref=NCBI_GP:RJP76325.1;Name=RJP76325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447105.1;locus_tag=C5O68_12705;product=hypothetical protein;protein_id=RJP76325.1;transl_table=11 PTQV01000142.1 Genbank gene 1571 1912 . + . ID=gene-C5O68_12710;Name=C5O68_12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12710 PTQV01000142.1 Protein Homology CDS 1571 1912 . + 0 ID=cds-RJP76326.1;Parent=gene-C5O68_12710;Dbxref=NCBI_GP:RJP76326.1;Name=RJP76326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447104.1;locus_tag=C5O68_12710;product=DNA-binding protein;protein_id=RJP76326.1;transl_table=11 PTQV01000142.1 Genbank gene 1905 2180 . + . ID=gene-C5O68_12715;Name=C5O68_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12715 PTQV01000142.1 Protein Homology CDS 1905 2180 . + 0 ID=cds-RJP76327.1;Parent=gene-C5O68_12715;Dbxref=NCBI_GP:RJP76327.1;Name=RJP76327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397283.1;locus_tag=C5O68_12715;product=hypothetical protein;protein_id=RJP76327.1;transl_table=11 PTQV01000142.1 Genbank gene 2320 2765 . + . ID=gene-C5O68_12720;Name=C5O68_12720;end_range=2765,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12720;partial=true PTQV01000142.1 Protein Homology CDS 2320 2765 . + 0 ID=cds-RJP76328.1;Parent=gene-C5O68_12720;Dbxref=NCBI_GP:RJP76328.1;Name=RJP76328.1;end_range=2765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447102.1;locus_tag=C5O68_12720;partial=true;product=hypothetical protein;protein_id=RJP76328.1;transl_table=11 ##sequence-region PTQV01000143.1 1 1059 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000143.1 Genbank region 1 1059 . + . ID=PTQV01000143.1:1..1059;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000143.1 Genbank gene 1 435 . + . ID=gene-C5O68_12725;Name=C5O68_12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12725;partial=true;start_range=.,1 PTQV01000143.1 Protein Homology CDS 1 435 . + 0 ID=cds-RJP76295.1;Parent=gene-C5O68_12725;Dbxref=NCBI_GP:RJP76295.1;Name=RJP76295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447102.1;locus_tag=C5O68_12725;partial=true;product=hypothetical protein;protein_id=RJP76295.1;start_range=.,1;transl_table=11 PTQV01000143.1 Genbank gene 479 1059 . + . ID=gene-C5O68_12730;Name=C5O68_12730;end_range=1059,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12730;partial=true PTQV01000143.1 Protein Homology CDS 479 1059 . + 0 ID=cds-RJP76296.1;Parent=gene-C5O68_12730;Dbxref=NCBI_GP:RJP76296.1;Name=RJP76296.1;end_range=1059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453774.1;locus_tag=C5O68_12730;partial=true;product=DNA primase;protein_id=RJP76296.1;transl_table=11 ##sequence-region PTQV01000144.1 1 1099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000144.1 Genbank region 1 1099 . + . ID=PTQV01000144.1:1..1099;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000144.1 Genbank gene 1 468 . - . ID=gene-C5O68_12735;Name=C5O68_12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12735;partial=true;start_range=.,1 PTQV01000144.1 Protein Homology CDS 1 468 . - 0 ID=cds-RJP76284.1;Parent=gene-C5O68_12735;Dbxref=NCBI_GP:RJP76284.1;Name=RJP76284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=C5O68_12735;partial=true;product=IS1380 family transposase;protein_id=RJP76284.1;start_range=.,1;transl_table=11 PTQV01000144.1 Genbank pseudogene 633 1099 . - . ID=gene-C5O68_12740;Name=C5O68_12740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12740;pseudo=true PTQV01000144.1 Protein Homology CDS 633 1099 . - 1 ID=cds-C5O68_12740;Parent=gene-C5O68_12740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_12740;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000145.1 1 2561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000145.1 Genbank region 1 2561 . + . ID=PTQV01000145.1:1..2561;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000145.1 Genbank gene 1 636 . - . ID=gene-C5O68_12745;Name=C5O68_12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12745;partial=true;start_range=.,1 PTQV01000145.1 Protein Homology CDS 1 636 . - 0 ID=cds-RJP76223.1;Parent=gene-C5O68_12745;Dbxref=NCBI_GP:RJP76223.1;Name=RJP76223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447102.1;locus_tag=C5O68_12745;partial=true;product=hypothetical protein;protein_id=RJP76223.1;start_range=.,1;transl_table=11 PTQV01000145.1 Genbank gene 617 904 . - . ID=gene-C5O68_12750;Name=C5O68_12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12750 PTQV01000145.1 Protein Homology CDS 617 904 . - 0 ID=cds-RJP76224.1;Parent=gene-C5O68_12750;Dbxref=NCBI_GP:RJP76224.1;Name=RJP76224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492139.1;locus_tag=C5O68_12750;product=transcriptional regulator;protein_id=RJP76224.1;transl_table=11 PTQV01000145.1 Genbank gene 897 1238 . - . ID=gene-C5O68_12755;Name=C5O68_12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12755 PTQV01000145.1 Protein Homology CDS 897 1238 . - 0 ID=cds-RJP76225.1;Parent=gene-C5O68_12755;Dbxref=NCBI_GP:RJP76225.1;Name=RJP76225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447104.1;locus_tag=C5O68_12755;product=DNA-binding protein;protein_id=RJP76225.1;transl_table=11 PTQV01000145.1 Genbank gene 1235 1450 . - . ID=gene-C5O68_12760;Name=C5O68_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12760 PTQV01000145.1 Protein Homology CDS 1235 1450 . - 0 ID=cds-RJP76226.1;Parent=gene-C5O68_12760;Dbxref=NCBI_GP:RJP76226.1;Name=RJP76226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447106.1;locus_tag=C5O68_12760;product=hypothetical protein;protein_id=RJP76226.1;transl_table=11 PTQV01000145.1 Genbank gene 1452 1961 . - . ID=gene-C5O68_12765;Name=C5O68_12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12765 PTQV01000145.1 Protein Homology CDS 1452 1961 . - 0 ID=cds-RJP76227.1;Parent=gene-C5O68_12765;Dbxref=NCBI_GP:RJP76227.1;Name=RJP76227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559698.1;locus_tag=C5O68_12765;product=hypothetical protein;protein_id=RJP76227.1;transl_table=11 PTQV01000145.1 Genbank gene 2142 2549 . - . ID=gene-C5O68_12770;Name=C5O68_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12770 PTQV01000145.1 Protein Homology CDS 2142 2549 . - 0 ID=cds-RJP76228.1;Parent=gene-C5O68_12770;Dbxref=NCBI_GP:RJP76228.1;Name=RJP76228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517977.1;locus_tag=C5O68_12770;product=hypothetical protein;protein_id=RJP76228.1;transl_table=11 ##sequence-region PTQV01000014.1 1 275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000014.1 Genbank region 1 275 . + . ID=PTQV01000014.1:1..275;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000014.1 Genbank gene 100 171 . + . ID=gene-C5O68_02435;Name=C5O68_02435;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02435 PTQV01000014.1 tRNAscan-SE tRNA 100 171 . + . ID=rna-C5O68_02435;Parent=gene-C5O68_02435;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02435;product=tRNA-Glu PTQV01000014.1 tRNAscan-SE exon 100 171 . + . ID=exon-C5O68_02435-1;Parent=rna-C5O68_02435;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02435;product=tRNA-Glu ##sequence-region PTQV01000146.1 1 2175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000146.1 Genbank region 1 2175 . + . ID=PTQV01000146.1:1..2175;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000146.1 Genbank gene 265 1935 . + . ID=gene-C5O68_12775;Name=C5O68_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12775 PTQV01000146.1 Protein Homology CDS 265 1935 . + 0 ID=cds-RJP76209.1;Parent=gene-C5O68_12775;Dbxref=NCBI_GP:RJP76209.1;Name=RJP76209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358702.1;locus_tag=C5O68_12775;product=formate--tetrahydrofolate ligase;protein_id=RJP76209.1;transl_table=11 ##sequence-region PTQV01000147.1 1 2569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000147.1 Genbank region 1 2569 . + . ID=PTQV01000147.1:1..2569;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000147.1 Genbank gene 38 562 . + . ID=gene-C5O68_12780;Name=C5O68_12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12780 PTQV01000147.1 Protein Homology CDS 38 562 . + 0 ID=cds-RJP76177.1;Parent=gene-C5O68_12780;Dbxref=NCBI_GP:RJP76177.1;Name=RJP76177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017333.1;locus_tag=C5O68_12780;product=type I restriction endonuclease subunit S;protein_id=RJP76177.1;transl_table=11 PTQV01000147.1 Genbank gene 619 1416 . + . ID=gene-C5O68_12785;Name=C5O68_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12785 PTQV01000147.1 Protein Homology CDS 619 1416 . + 0 ID=cds-RJP76175.1;Parent=gene-C5O68_12785;Dbxref=NCBI_GP:RJP76175.1;Name=RJP76175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651176.1;locus_tag=C5O68_12785;product=integrase;protein_id=RJP76175.1;transl_table=11 PTQV01000147.1 Genbank pseudogene 1403 1968 . + . ID=gene-C5O68_12790;Name=C5O68_12790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12790;pseudo=true PTQV01000147.1 Protein Homology CDS 1403 1968 . + 0 ID=cds-C5O68_12790;Parent=gene-C5O68_12790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285157.1;locus_tag=C5O68_12790;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 PTQV01000147.1 Genbank gene 1928 2428 . - . ID=gene-C5O68_12795;Name=C5O68_12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12795 PTQV01000147.1 Protein Homology CDS 1928 2428 . - 0 ID=cds-RJP76176.1;Parent=gene-C5O68_12795;Dbxref=NCBI_GP:RJP76176.1;Name=RJP76176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284928.1;locus_tag=C5O68_12795;product=restriction endonuclease subunit S;protein_id=RJP76176.1;transl_table=11 PTQV01000147.1 Genbank pseudogene 2482 2569 . - . ID=gene-C5O68_12800;Name=C5O68_12800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12800;pseudo=true PTQV01000147.1 Protein Homology CDS 2482 2569 . - 0 ID=cds-C5O68_12800;Parent=gene-C5O68_12800;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839301.1;locus_tag=C5O68_12800;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 ##sequence-region PTQV01000148.1 1 1566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000148.1 Genbank region 1 1566 . + . ID=PTQV01000148.1:1..1566;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000148.1 Genbank gene 1 462 . - . ID=gene-C5O68_12805;Name=C5O68_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12805;partial=true;start_range=.,1 PTQV01000148.1 Protein Homology CDS 1 462 . - 0 ID=cds-RJP76138.1;Parent=gene-C5O68_12805;Dbxref=NCBI_GP:RJP76138.1;Name=RJP76138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358420.1;locus_tag=C5O68_12805;partial=true;product=CPBP family intramembrane metalloprotease;protein_id=RJP76138.1;start_range=.,1;transl_table=11 PTQV01000148.1 Genbank gene 681 1490 . + . ID=gene-C5O68_12810;Name=C5O68_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12810 PTQV01000148.1 Protein Homology CDS 681 1490 . + 0 ID=cds-RJP76139.1;Parent=gene-C5O68_12810;Dbxref=NCBI_GP:RJP76139.1;Name=RJP76139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358418.1;locus_tag=C5O68_12810;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP76139.1;transl_table=11 ##sequence-region PTQV01000149.1 1 553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000149.1 Genbank region 1 553 . + . ID=PTQV01000149.1:1..553;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000149.1 Genbank gene 1 231 . - . ID=gene-C5O68_12815;Name=C5O68_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12815 PTQV01000149.1 Protein Homology CDS 1 231 . - 0 ID=cds-RJP76065.1;Parent=gene-C5O68_12815;Dbxref=NCBI_GP:RJP76065.1;Name=RJP76065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611574.1;locus_tag=C5O68_12815;product=hypothetical protein;protein_id=RJP76065.1;transl_table=11 PTQV01000149.1 Genbank gene 172 531 . + . ID=gene-C5O68_12820;Name=C5O68_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12820 PTQV01000149.1 Protein Homology CDS 172 531 . + 0 ID=cds-RJP76066.1;Parent=gene-C5O68_12820;Dbxref=NCBI_GP:RJP76066.1;Name=RJP76066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_12820;product=transposase;protein_id=RJP76066.1;transl_table=11 ##sequence-region PTQV01000150.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000150.1 Genbank region 1 525 . + . ID=PTQV01000150.1:1..525;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000150.1 Genbank gene 36 185 . + . ID=gene-C5O68_12825;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C5O68_12825 PTQV01000150.1 Protein Homology CDS 36 185 . + 0 ID=cds-RJP76041.1;Parent=gene-C5O68_12825;Dbxref=NCBI_GP:RJP76041.1;Name=RJP76041.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028330.1;locus_tag=C5O68_12825;product=50S ribosomal protein L33;protein_id=RJP76041.1;transl_table=11 PTQV01000150.1 Genbank gene 225 458 . + . ID=gene-C5O68_12830;Name=C5O68_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12830 PTQV01000150.1 Protein Homology CDS 225 458 . + 0 ID=cds-RJP76040.1;Parent=gene-C5O68_12830;Dbxref=NCBI_GP:RJP76040.1;Name=RJP76040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358471.1;locus_tag=C5O68_12830;product=preprotein translocase subunit SecG;protein_id=RJP76040.1;transl_table=11 ##sequence-region PTQV01000151.1 1 2307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000151.1 Genbank region 1 2307 . + . ID=PTQV01000151.1:1..2307;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000151.1 Genbank pseudogene 44 806 . + . ID=gene-C5O68_12835;Name=C5O68_12835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12835;pseudo=true PTQV01000151.1 Protein Homology CDS 44 806 . + 0 ID=cds-C5O68_12835;Parent=gene-C5O68_12835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952453.1;locus_tag=C5O68_12835;product=MutR family transcriptional regulator;pseudo=true;transl_table=11 PTQV01000151.1 Genbank gene 996 2243 . + . ID=gene-C5O68_12840;Name=C5O68_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12840 PTQV01000151.1 Protein Homology CDS 996 2243 . + 0 ID=cds-RJP76039.1;Parent=gene-C5O68_12840;Dbxref=NCBI_GP:RJP76039.1;Name=RJP76039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359523.1;locus_tag=C5O68_12840;product=transporter;protein_id=RJP76039.1;transl_table=11 ##sequence-region PTQV01000152.1 1 373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000152.1 Genbank region 1 373 . + . ID=PTQV01000152.1:1..373;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000152.1 Genbank gene 1 373 . + . ID=gene-C5O68_12845;Name=C5O68_12845;end_range=373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12845;partial=true;start_range=.,1 PTQV01000152.1 GeneMarkS+ CDS 1 373 . + 1 ID=cds-RJP76010.1;Parent=gene-C5O68_12845;Dbxref=NCBI_GP:RJP76010.1;Name=RJP76010.1;end_range=373,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_12845;partial=true;product=hypothetical protein;protein_id=RJP76010.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000015.1 1 18617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000015.1 Genbank region 1 18617 . + . ID=PTQV01000015.1:1..18617;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000015.1 Genbank gene 441 1595 . - . ID=gene-C5O68_02440;Name=C5O68_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02440 PTQV01000015.1 Protein Homology CDS 441 1595 . - 0 ID=cds-RJP83800.1;Parent=gene-C5O68_02440;Dbxref=NCBI_GP:RJP83800.1;Name=RJP83800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358383.1;locus_tag=C5O68_02440;product=carbamoyl phosphate synthase large subunit;protein_id=RJP83800.1;transl_table=11 PTQV01000015.1 Genbank pseudogene 1608 2347 . - . ID=gene-C5O68_02445;Name=C5O68_02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02445;pseudo=true PTQV01000015.1 Protein Homology CDS 1608 2347 . - 0 ID=cds-C5O68_02445;Parent=gene-C5O68_02445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446459.1;locus_tag=C5O68_02445;product=esterase;pseudo=true;transl_table=11 PTQV01000015.1 Genbank gene 2369 3193 . - . ID=gene-C5O68_02450;Name=C5O68_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02450 PTQV01000015.1 Protein Homology CDS 2369 3193 . - 0 ID=cds-RJP83801.1;Parent=gene-C5O68_02450;Dbxref=NCBI_GP:RJP83801.1;Name=RJP83801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446460.1;locus_tag=C5O68_02450;product=alpha/beta hydrolase;protein_id=RJP83801.1;transl_table=11 PTQV01000015.1 Genbank gene 3328 4542 . - . ID=gene-C5O68_02455;Name=C5O68_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02455 PTQV01000015.1 Protein Homology CDS 3328 4542 . - 0 ID=cds-RJP83802.1;Parent=gene-C5O68_02455;Dbxref=NCBI_GP:RJP83802.1;Name=RJP83802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358378.1;locus_tag=C5O68_02455;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=RJP83802.1;transl_table=11 PTQV01000015.1 Genbank gene 4551 5693 . - . ID=gene-C5O68_02460;Name=C5O68_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02460 PTQV01000015.1 Protein Homology CDS 4551 5693 . - 0 ID=cds-RJP83803.1;Parent=gene-C5O68_02460;Dbxref=NCBI_GP:RJP83803.1;Name=RJP83803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358377.1;locus_tag=C5O68_02460;product=cysteine desulfurase;protein_id=RJP83803.1;transl_table=11 PTQV01000015.1 Genbank gene 5726 6265 . + . ID=gene-C5O68_02465;Name=C5O68_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02465 PTQV01000015.1 Protein Homology CDS 5726 6265 . + 0 ID=cds-RJP83804.1;Parent=gene-C5O68_02465;Dbxref=NCBI_GP:RJP83804.1;Name=RJP83804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358376.1;locus_tag=C5O68_02465;product=hypothetical protein;protein_id=RJP83804.1;transl_table=11 PTQV01000015.1 Genbank gene 6310 8613 . - . ID=gene-C5O68_02470;Name=C5O68_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02470 PTQV01000015.1 Protein Homology CDS 6310 8613 . - 0 ID=cds-RJP83805.1;Parent=gene-C5O68_02470;Dbxref=NCBI_GP:RJP83805.1;Name=RJP83805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446464.1;locus_tag=C5O68_02470;product=cell division protein FtsK;protein_id=RJP83805.1;transl_table=11 PTQV01000015.1 Genbank gene 8702 10654 . - . ID=gene-C5O68_02475;Name=C5O68_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02475 PTQV01000015.1 Protein Homology CDS 8702 10654 . - 0 ID=cds-RJP83806.1;Parent=gene-C5O68_02475;Dbxref=NCBI_GP:RJP83806.1;Name=RJP83806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446465.1;locus_tag=C5O68_02475;product=PTS fructose transporter subunit IIC;protein_id=RJP83806.1;transl_table=11 PTQV01000015.1 Genbank gene 10651 11562 . - . ID=gene-C5O68_02480;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=C5O68_02480 PTQV01000015.1 Protein Homology CDS 10651 11562 . - 0 ID=cds-RJP83807.1;Parent=gene-C5O68_02480;Dbxref=NCBI_GP:RJP83807.1;Name=RJP83807.1;gbkey=CDS;gene=pfkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358373.1;locus_tag=C5O68_02480;product=1-phosphofructokinase;protein_id=RJP83807.1;transl_table=11 PTQV01000015.1 Genbank gene 11559 12299 . - . ID=gene-C5O68_02485;Name=C5O68_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02485 PTQV01000015.1 Protein Homology CDS 11559 12299 . - 0 ID=cds-RJP83808.1;Parent=gene-C5O68_02485;Dbxref=NCBI_GP:RJP83808.1;Name=RJP83808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358372.1;locus_tag=C5O68_02485;product=DeoR/GlpR transcriptional regulator;protein_id=RJP83808.1;transl_table=11 PTQV01000015.1 Genbank gene 12462 12549 . + . ID=gene-C5O68_02490;Name=C5O68_02490;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02490 PTQV01000015.1 tRNAscan-SE tRNA 12462 12549 . + . ID=rna-C5O68_02490;Parent=gene-C5O68_02490;anticodon=(pos:12496..12498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02490;product=tRNA-Ser PTQV01000015.1 tRNAscan-SE exon 12462 12549 . + . ID=exon-C5O68_02490-1;Parent=rna-C5O68_02490;anticodon=(pos:12496..12498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02490;product=tRNA-Ser PTQV01000015.1 Genbank gene 12905 13369 . + . ID=gene-C5O68_02495;Name=C5O68_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02495 PTQV01000015.1 Protein Homology CDS 12905 13369 . + 0 ID=cds-RJP83809.1;Parent=gene-C5O68_02495;Dbxref=NCBI_GP:RJP83809.1;Name=RJP83809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049399.1;locus_tag=C5O68_02495;product=TM2 domain-containing protein;protein_id=RJP83809.1;transl_table=11 PTQV01000015.1 Genbank gene 13424 13894 . + . ID=gene-C5O68_02500;Name=C5O68_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02500 PTQV01000015.1 Protein Homology CDS 13424 13894 . + 0 ID=cds-RJP83810.1;Parent=gene-C5O68_02500;Dbxref=NCBI_GP:RJP83810.1;Name=RJP83810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006740293.1;locus_tag=C5O68_02500;product=hypothetical protein;protein_id=RJP83810.1;transl_table=11 PTQV01000015.1 Genbank gene 13921 14697 . + . ID=gene-C5O68_02505;Name=C5O68_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02505 PTQV01000015.1 Protein Homology CDS 13921 14697 . + 0 ID=cds-RJP83811.1;Parent=gene-C5O68_02505;Dbxref=NCBI_GP:RJP83811.1;Name=RJP83811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739744.1;locus_tag=C5O68_02505;product=DUF1828 domain-containing protein;protein_id=RJP83811.1;transl_table=11 PTQV01000015.1 Genbank gene 14928 15275 . - . ID=gene-C5O68_02510;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=C5O68_02510 PTQV01000015.1 cmsearch tmRNA 14928 15275 . - . ID=rna-C5O68_02510;Parent=gene-C5O68_02510;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02510;product=transfer-messenger RNA PTQV01000015.1 cmsearch exon 14928 15275 . - . ID=exon-C5O68_02510-1;Parent=rna-C5O68_02510;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02510;product=transfer-messenger RNA PTQV01000015.1 Genbank gene 15921 17030 . - . ID=gene-C5O68_02515;Name=C5O68_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02515 PTQV01000015.1 Protein Homology CDS 15921 17030 . - 0 ID=cds-RJP83812.1;Parent=gene-C5O68_02515;Dbxref=NCBI_GP:RJP83812.1;Name=RJP83812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358371.1;locus_tag=C5O68_02515;product=AI-2E family transporter;protein_id=RJP83812.1;transl_table=11 PTQV01000015.1 Genbank gene 17133 18374 . + . ID=gene-C5O68_02520;Name=C5O68_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02520 PTQV01000015.1 Protein Homology CDS 17133 18374 . + 0 ID=cds-RJP83813.1;Parent=gene-C5O68_02520;Dbxref=NCBI_GP:RJP83813.1;Name=RJP83813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358370.1;locus_tag=C5O68_02520;product=D-alanyl-D-alanine carboxypeptidase;protein_id=RJP83813.1;transl_table=11 ##sequence-region PTQV01000153.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000153.1 Genbank region 1 258 . + . ID=PTQV01000153.1:1..258;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000153.1 Genbank pseudogene 121 258 . - . ID=gene-C5O68_12850;Name=C5O68_12850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12850;pseudo=true PTQV01000153.1 Protein Homology CDS 121 258 . - 0 ID=cds-C5O68_12850;Parent=gene-C5O68_12850;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611967.1;locus_tag=C5O68_12850;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000154.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000154.1 Genbank region 1 405 . + . ID=PTQV01000154.1:1..405;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 ##sequence-region PTQV01000155.1 1 409 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000155.1 Genbank region 1 409 . + . ID=PTQV01000155.1:1..409;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000155.1 Genbank pseudogene 199 409 . + . ID=gene-C5O68_12855;Name=C5O68_12855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_12855;pseudo=true PTQV01000155.1 Protein Homology CDS 199 409 . + 0 ID=cds-C5O68_12855;Parent=gene-C5O68_12855;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446359.1;locus_tag=C5O68_12855;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000156.1 1 312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000156.1 Genbank region 1 312 . + . ID=PTQV01000156.1:1..312;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000156.1 Genbank gene 1 312 . + . ID=gene-C5O68_12860;Name=C5O68_12860;end_range=312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12860;partial=true;start_range=.,1 PTQV01000156.1 GeneMarkS+ CDS 1 312 . + 2 ID=cds-RJP75897.1;Parent=gene-C5O68_12860;Dbxref=NCBI_GP:RJP75897.1;Name=RJP75897.1;end_range=312,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_12860;partial=true;product=hypothetical protein;protein_id=RJP75897.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000016.1 1 60349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000016.1 Genbank region 1 60349 . + . ID=PTQV01000016.1:1..60349;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000016.1 Genbank gene 1 334 . + . ID=gene-C5O68_02525;Name=C5O68_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02525;partial=true;start_range=.,1 PTQV01000016.1 Protein Homology CDS 1 334 . + 1 ID=cds-RJP83739.1;Parent=gene-C5O68_02525;Dbxref=NCBI_GP:RJP83739.1;Name=RJP83739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_02525;partial=true;product=IS630 family transposase;protein_id=RJP83739.1;start_range=.,1;transl_table=11 PTQV01000016.1 Genbank pseudogene 316 753 . - . ID=gene-C5O68_02530;Name=C5O68_02530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02530;pseudo=true PTQV01000016.1 Protein Homology CDS 316 753 . - 0 ID=cds-C5O68_02530;Parent=gene-C5O68_02530;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001153884.1;locus_tag=C5O68_02530;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 962 1156 . + . ID=gene-C5O68_02535;Name=C5O68_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02535 PTQV01000016.1 Protein Homology CDS 962 1156 . + 0 ID=cds-RJP83740.1;Parent=gene-C5O68_02535;Dbxref=NCBI_GP:RJP83740.1;Name=RJP83740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357895.1;locus_tag=C5O68_02535;product=transcriptional regulator;protein_id=RJP83740.1;transl_table=11 PTQV01000016.1 Genbank gene 1172 1714 . + . ID=gene-C5O68_02540;Name=C5O68_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02540 PTQV01000016.1 Protein Homology CDS 1172 1714 . + 0 ID=cds-RJP83741.1;Parent=gene-C5O68_02540;Dbxref=NCBI_GP:RJP83741.1;Name=RJP83741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446870.1;locus_tag=C5O68_02540;product=hypothetical protein;protein_id=RJP83741.1;transl_table=11 PTQV01000016.1 Genbank gene 1725 1982 . + . ID=gene-C5O68_02545;Name=C5O68_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02545 PTQV01000016.1 Protein Homology CDS 1725 1982 . + 0 ID=cds-RJP83742.1;Parent=gene-C5O68_02545;Dbxref=NCBI_GP:RJP83742.1;Name=RJP83742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357894.1;locus_tag=C5O68_02545;product=hypothetical protein;protein_id=RJP83742.1;transl_table=11 PTQV01000016.1 Genbank gene 1979 2305 . + . ID=gene-C5O68_02550;Name=C5O68_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02550 PTQV01000016.1 Protein Homology CDS 1979 2305 . + 0 ID=cds-RJP83743.1;Parent=gene-C5O68_02550;Dbxref=NCBI_GP:RJP83743.1;Name=RJP83743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838777.1;locus_tag=C5O68_02550;product=hypothetical protein;protein_id=RJP83743.1;transl_table=11 PTQV01000016.1 Genbank gene 2332 2910 . + . ID=gene-C5O68_02555;Name=C5O68_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02555 PTQV01000016.1 Protein Homology CDS 2332 2910 . + 0 ID=cds-RJP83744.1;Parent=gene-C5O68_02555;Dbxref=NCBI_GP:RJP83744.1;Name=RJP83744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446872.1;locus_tag=C5O68_02555;product=DUF3278 domain-containing protein;protein_id=RJP83744.1;transl_table=11 PTQV01000016.1 Genbank gene 2907 3383 . + . ID=gene-C5O68_02560;Name=C5O68_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02560 PTQV01000016.1 Protein Homology CDS 2907 3383 . + 0 ID=cds-RJP83745.1;Parent=gene-C5O68_02560;Dbxref=NCBI_GP:RJP83745.1;Name=RJP83745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446873.1;locus_tag=C5O68_02560;product=glutathione peroxidase;protein_id=RJP83745.1;transl_table=11 PTQV01000016.1 Genbank gene 3605 5818 . - . ID=gene-C5O68_02565;Name=C5O68_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02565 PTQV01000016.1 Protein Homology CDS 3605 5818 . - 0 ID=cds-RJP83746.1;Parent=gene-C5O68_02565;Dbxref=NCBI_GP:RJP83746.1;Name=RJP83746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357878.1;locus_tag=C5O68_02565;product=alpha-xylosidase;protein_id=RJP83746.1;transl_table=11 PTQV01000016.1 Genbank pseudogene 6014 6219 . - . ID=gene-C5O68_02570;Name=C5O68_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02570;pseudo=true PTQV01000016.1 Protein Homology CDS 6014 6219 . - 0 ID=cds-C5O68_02570;Parent=gene-C5O68_02570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823010.1;locus_tag=C5O68_02570;product=cell filamentation protein;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 6219 6395 . - . ID=gene-C5O68_02575;Name=C5O68_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02575 PTQV01000016.1 Protein Homology CDS 6219 6395 . - 0 ID=cds-RJP83747.1;Parent=gene-C5O68_02575;Dbxref=NCBI_GP:RJP83747.1;Name=RJP83747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357877.1;locus_tag=C5O68_02575;product=hypothetical protein;protein_id=RJP83747.1;transl_table=11 PTQV01000016.1 Genbank gene 6800 8008 . + . ID=gene-C5O68_02580;Name=C5O68_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02580 PTQV01000016.1 Protein Homology CDS 6800 8008 . + 0 ID=cds-RJP83748.1;Parent=gene-C5O68_02580;Dbxref=NCBI_GP:RJP83748.1;Name=RJP83748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446879.1;locus_tag=C5O68_02580;product=AAA family ATPase;protein_id=RJP83748.1;transl_table=11 PTQV01000016.1 Genbank gene 8471 9334 . - . ID=gene-C5O68_02585;Name=C5O68_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02585 PTQV01000016.1 Protein Homology CDS 8471 9334 . - 0 ID=cds-RJP83749.1;Parent=gene-C5O68_02585;Dbxref=NCBI_GP:RJP83749.1;Name=RJP83749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446457.1;locus_tag=C5O68_02585;product=XRE family transcriptional regulator;protein_id=RJP83749.1;transl_table=11 PTQV01000016.1 Genbank gene 9525 9695 . + . ID=gene-C5O68_02590;Name=C5O68_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02590 PTQV01000016.1 Protein Homology CDS 9525 9695 . + 0 ID=cds-RJP83750.1;Parent=gene-C5O68_02590;Dbxref=NCBI_GP:RJP83750.1;Name=RJP83750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359356.1;locus_tag=C5O68_02590;product=hypothetical protein;protein_id=RJP83750.1;transl_table=11 PTQV01000016.1 Genbank gene 9798 10022 . + . ID=gene-C5O68_02595;Name=C5O68_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02595 PTQV01000016.1 Protein Homology CDS 9798 10022 . + 0 ID=cds-RJP83751.1;Parent=gene-C5O68_02595;Dbxref=NCBI_GP:RJP83751.1;Name=RJP83751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359357.1;locus_tag=C5O68_02595;product=type 2 lantibiotic;protein_id=RJP83751.1;transl_table=11 PTQV01000016.1 Genbank gene 10029 10217 . + . ID=gene-C5O68_02600;Name=C5O68_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02600 PTQV01000016.1 Protein Homology CDS 10029 10217 . + 0 ID=cds-RJP83752.1;Parent=gene-C5O68_02600;Dbxref=NCBI_GP:RJP83752.1;Name=RJP83752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359358.1;locus_tag=C5O68_02600;product=type 2 lantibiotic;protein_id=RJP83752.1;transl_table=11 PTQV01000016.1 Genbank gene 10332 13322 . + . ID=gene-C5O68_02605;Name=C5O68_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02605 PTQV01000016.1 Protein Homology CDS 10332 13322 . + 0 ID=cds-RJP83753.1;Parent=gene-C5O68_02605;Dbxref=NCBI_GP:RJP83753.1;Name=RJP83753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359359.1;locus_tag=C5O68_02605;product=type 2 lantipeptide synthetase LanM;protein_id=RJP83753.1;transl_table=11 PTQV01000016.1 Genbank gene 13672 14376 . + . ID=gene-C5O68_02610;Name=C5O68_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02610 PTQV01000016.1 Protein Homology CDS 13672 14376 . + 0 ID=cds-RJP83754.1;Parent=gene-C5O68_02610;Dbxref=NCBI_GP:RJP83754.1;Name=RJP83754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359360.1;locus_tag=C5O68_02610;product=flavodoxin family protein;protein_id=RJP83754.1;transl_table=11 PTQV01000016.1 Genbank gene 14357 15286 . + . ID=gene-C5O68_02615;Name=C5O68_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02615 PTQV01000016.1 Protein Homology CDS 14357 15286 . + 0 ID=cds-RJP83755.1;Parent=gene-C5O68_02615;Dbxref=NCBI_GP:RJP83755.1;Name=RJP83755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359361.1;locus_tag=C5O68_02615;product=hypothetical protein;protein_id=RJP83755.1;transl_table=11 PTQV01000016.1 Genbank gene 15283 17391 . + . ID=gene-C5O68_02620;Name=C5O68_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02620 PTQV01000016.1 Protein Homology CDS 15283 17391 . + 0 ID=cds-RJP83756.1;Parent=gene-C5O68_02620;Dbxref=NCBI_GP:RJP83756.1;Name=RJP83756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359362.1;locus_tag=C5O68_02620;product=peptidase domain-containing ABC transporter;protein_id=RJP83756.1;transl_table=11 PTQV01000016.1 Genbank gene 17415 19154 . + . ID=gene-C5O68_02625;Name=C5O68_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02625 PTQV01000016.1 Protein Homology CDS 17415 19154 . + 0 ID=cds-RJP83757.1;Parent=gene-C5O68_02625;Dbxref=NCBI_GP:RJP83757.1;Name=RJP83757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359363.1;locus_tag=C5O68_02625;product=serine protease;protein_id=RJP83757.1;transl_table=11 PTQV01000016.1 Genbank gene 19205 19972 . + . ID=gene-C5O68_02630;Name=C5O68_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02630 PTQV01000016.1 Protein Homology CDS 19205 19972 . + 0 ID=cds-RJP83758.1;Parent=gene-C5O68_02630;Dbxref=NCBI_GP:RJP83758.1;Name=RJP83758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359364.1;locus_tag=C5O68_02630;product=hypothetical protein;protein_id=RJP83758.1;transl_table=11 PTQV01000016.1 Genbank gene 19974 20606 . + . ID=gene-C5O68_02635;Name=C5O68_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02635 PTQV01000016.1 Protein Homology CDS 19974 20606 . + 0 ID=cds-RJP83759.1;Parent=gene-C5O68_02635;Dbxref=NCBI_GP:RJP83759.1;Name=RJP83759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359365.1;locus_tag=C5O68_02635;product=peptide ABC transporter ATP-binding protein;protein_id=RJP83759.1;transl_table=11 PTQV01000016.1 Genbank pseudogene 20740 20999 . + . ID=gene-C5O68_02640;Name=C5O68_02640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02640;pseudo=true PTQV01000016.1 Protein Homology CDS 20740 20999 . + 0 ID=cds-C5O68_02640;Parent=gene-C5O68_02640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843943.1;locus_tag=C5O68_02640;product=competence protein ComA;pseudo=true;transl_table=11 PTQV01000016.1 Genbank pseudogene 21225 21308 . - . ID=gene-C5O68_02645;Name=C5O68_02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02645;pseudo=true PTQV01000016.1 Protein Homology CDS 21225 21308 . - 0 ID=cds-C5O68_02645;Parent=gene-C5O68_02645;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245510.1;locus_tag=C5O68_02645;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 21506 21919 . - . ID=gene-C5O68_02650;Name=C5O68_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02650 PTQV01000016.1 Protein Homology CDS 21506 21919 . - 0 ID=cds-RJP83795.1;Parent=gene-C5O68_02650;Dbxref=NCBI_GP:RJP83795.1;Name=RJP83795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446945.1;locus_tag=C5O68_02650;product=nucleoside-diphosphate kinase;protein_id=RJP83795.1;transl_table=11 PTQV01000016.1 Genbank pseudogene 22200 22274 . - . ID=gene-C5O68_02655;Name=C5O68_02655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02655;pseudo=true PTQV01000016.1 Protein Homology CDS 22200 22274 . - 0 ID=cds-C5O68_02655;Parent=gene-C5O68_02655;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_02655;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 22361 26011 . - . ID=gene-C5O68_02660;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=C5O68_02660 PTQV01000016.1 Protein Homology CDS 22361 26011 . - 0 ID=cds-RJP83796.1;Parent=gene-C5O68_02660;Dbxref=NCBI_GP:RJP83796.1;Name=RJP83796.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446946.1;locus_tag=C5O68_02660;product=DNA-directed RNA polymerase subunit beta';protein_id=RJP83796.1;transl_table=11 PTQV01000016.1 Genbank gene 26077 29682 . - . ID=gene-C5O68_02665;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=C5O68_02665 PTQV01000016.1 Protein Homology CDS 26077 29682 . - 0 ID=cds-RJP83760.1;Parent=gene-C5O68_02665;Dbxref=NCBI_GP:RJP83760.1;Name=RJP83760.1;gbkey=CDS;gene=rpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446947.1;locus_tag=C5O68_02665;product=DNA-directed RNA polymerase subunit beta;protein_id=RJP83760.1;transl_table=11 PTQV01000016.1 Genbank gene 30097 30167 . + . ID=gene-C5O68_02670;Name=C5O68_02670;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02670 PTQV01000016.1 tRNAscan-SE tRNA 30097 30167 . + . ID=rna-C5O68_02670;Parent=gene-C5O68_02670;anticodon=(pos:30129..30131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02670;product=tRNA-Cys PTQV01000016.1 tRNAscan-SE exon 30097 30167 . + . ID=exon-C5O68_02670-1;Parent=rna-C5O68_02670;anticodon=(pos:30129..30131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02670;product=tRNA-Cys PTQV01000016.1 Genbank gene 30137 30253 . + . ID=gene-C5O68_02675;Name=C5O68_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02675 PTQV01000016.1 Protein Homology CDS 30137 30253 . + 0 ID=cds-RJP83761.1;Parent=gene-C5O68_02675;Dbxref=NCBI_GP:RJP83761.1;Name=RJP83761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811319.1;locus_tag=C5O68_02675;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=RJP83761.1;transl_table=11 PTQV01000016.1 Genbank gene 30354 31685 . - . ID=gene-C5O68_02680;Name=C5O68_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02680 PTQV01000016.1 Protein Homology CDS 30354 31685 . - 0 ID=cds-RJP83762.1;Parent=gene-C5O68_02680;Dbxref=NCBI_GP:RJP83762.1;Name=RJP83762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359370.1;locus_tag=C5O68_02680;product=HlyC/CorC family transporter;protein_id=RJP83762.1;transl_table=11 PTQV01000016.1 Genbank gene 31840 32664 . - . ID=gene-C5O68_02685;Name=C5O68_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02685 PTQV01000016.1 Protein Homology CDS 31840 32664 . - 0 ID=cds-RJP83763.1;Parent=gene-C5O68_02685;Dbxref=NCBI_GP:RJP83763.1;Name=RJP83763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359371.1;locus_tag=C5O68_02685;product=DNA-entry nuclease;protein_id=RJP83763.1;transl_table=11 PTQV01000016.1 Genbank gene 32703 32897 . - . ID=gene-C5O68_02690;Name=C5O68_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02690 PTQV01000016.1 Protein Homology CDS 32703 32897 . - 0 ID=cds-RJP83764.1;Parent=gene-C5O68_02690;Dbxref=NCBI_GP:RJP83764.1;Name=RJP83764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445458.1;locus_tag=C5O68_02690;product=DNA-directed RNA polymerase subunit beta;protein_id=RJP83764.1;transl_table=11 PTQV01000016.1 Genbank gene 32884 34167 . - . ID=gene-C5O68_02695;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=C5O68_02695 PTQV01000016.1 Protein Homology CDS 32884 34167 . - 0 ID=cds-RJP83765.1;Parent=gene-C5O68_02695;Dbxref=NCBI_GP:RJP83765.1;Name=RJP83765.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359373.1;locus_tag=C5O68_02695;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=RJP83765.1;transl_table=11 PTQV01000016.1 Genbank gene 34191 34421 . - . ID=gene-C5O68_02700;Name=C5O68_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02700 PTQV01000016.1 Protein Homology CDS 34191 34421 . - 0 ID=cds-RJP83766.1;Parent=gene-C5O68_02700;Dbxref=NCBI_GP:RJP83766.1;Name=RJP83766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008719807.1;locus_tag=C5O68_02700;product=phosphopantetheine adenylyltransferase;protein_id=RJP83766.1;transl_table=11 PTQV01000016.1 Genbank gene 34479 35516 . - . ID=gene-C5O68_02705;Name=C5O68_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02705 PTQV01000016.1 Protein Homology CDS 34479 35516 . - 0 ID=cds-RJP83767.1;Parent=gene-C5O68_02705;Dbxref=NCBI_GP:RJP83767.1;Name=RJP83767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359374.1;locus_tag=C5O68_02705;product=PDZ domain-containing protein;protein_id=RJP83767.1;transl_table=11 PTQV01000016.1 Genbank gene 35500 35988 . - . ID=gene-C5O68_02710;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=C5O68_02710 PTQV01000016.1 Protein Homology CDS 35500 35988 . - 0 ID=cds-RJP83768.1;Parent=gene-C5O68_02710;Dbxref=NCBI_GP:RJP83768.1;Name=RJP83768.1;gbkey=CDS;gene=coaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359375.1;locus_tag=C5O68_02710;product=pantetheine-phosphate adenylyltransferase;protein_id=RJP83768.1;transl_table=11 PTQV01000016.1 Genbank gene 35978 36517 . - . ID=gene-C5O68_02715;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=C5O68_02715 PTQV01000016.1 Protein Homology CDS 35978 36517 . - 0 ID=cds-RJP83769.1;Parent=gene-C5O68_02715;Dbxref=NCBI_GP:RJP83769.1;Name=RJP83769.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359376.1;locus_tag=C5O68_02715;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=RJP83769.1;transl_table=11 PTQV01000016.1 Genbank gene 36582 37574 . - . ID=gene-C5O68_02720;Name=C5O68_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02720 PTQV01000016.1 Protein Homology CDS 36582 37574 . - 0 ID=cds-RJP83770.1;Parent=gene-C5O68_02720;Dbxref=NCBI_GP:RJP83770.1;Name=RJP83770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445453.1;locus_tag=C5O68_02720;product=aspartate--ammonia ligase;protein_id=RJP83770.1;transl_table=11 PTQV01000016.1 Genbank pseudogene 37548 37679 . + . ID=gene-C5O68_02725;Name=C5O68_02725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02725;pseudo=true PTQV01000016.1 Protein Homology CDS 37548 37679 . + 0 ID=cds-C5O68_02725;Parent=gene-C5O68_02725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816583.1;locus_tag=C5O68_02725;product=OxaA precursor;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 37685 38368 . - . ID=gene-C5O68_02730;Name=C5O68_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02730 PTQV01000016.1 Protein Homology CDS 37685 38368 . - 0 ID=cds-RJP83771.1;Parent=gene-C5O68_02730;Dbxref=NCBI_GP:RJP83771.1;Name=RJP83771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445452.1;locus_tag=C5O68_02730;product=BAX inhibitor (BI)-1/YccA family protein;protein_id=RJP83771.1;transl_table=11 PTQV01000016.1 Genbank gene 38423 39163 . - . ID=gene-C5O68_02735;Name=C5O68_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02735 PTQV01000016.1 Protein Homology CDS 38423 39163 . - 0 ID=cds-RJP83772.1;Parent=gene-C5O68_02735;Dbxref=NCBI_GP:RJP83772.1;Name=RJP83772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445451.1;locus_tag=C5O68_02735;product=RNA methyltransferase;protein_id=RJP83772.1;transl_table=11 PTQV01000016.1 Genbank gene 39197 39475 . + . ID=gene-C5O68_02740;Name=C5O68_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02740 PTQV01000016.1 Protein Homology CDS 39197 39475 . + 0 ID=cds-RJP83773.1;Parent=gene-C5O68_02740;Dbxref=NCBI_GP:RJP83773.1;Name=RJP83773.1;Note=catalyzes the hydrolysis of acylphosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359381.1;locus_tag=C5O68_02740;product=acylphosphatase;protein_id=RJP83773.1;transl_table=11 PTQV01000016.1 Genbank gene 39553 40479 . + . ID=gene-C5O68_02745;Name=C5O68_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02745 PTQV01000016.1 Protein Homology CDS 39553 40479 . + 0 ID=cds-RJP83774.1;Parent=gene-C5O68_02745;Dbxref=NCBI_GP:RJP83774.1;Name=RJP83774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359382.1;locus_tag=C5O68_02745;product=membrane protein insertase YidC;protein_id=RJP83774.1;transl_table=11 PTQV01000016.1 Genbank gene 40552 41346 . - . ID=gene-C5O68_02750;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=C5O68_02750 PTQV01000016.1 Protein Homology CDS 40552 41346 . - 0 ID=cds-RJP83775.1;Parent=gene-C5O68_02750;Dbxref=NCBI_GP:RJP83775.1;Name=RJP83775.1;gbkey=CDS;gene=pflA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359383.1;locus_tag=C5O68_02750;product=pyruvate formate lyase-activating protein;protein_id=RJP83775.1;transl_table=11 PTQV01000016.1 Genbank gene 41472 42722 . - . ID=gene-C5O68_02755;Name=C5O68_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02755 PTQV01000016.1 Protein Homology CDS 41472 42722 . - 0 ID=cds-RJP83776.1;Parent=gene-C5O68_02755;Dbxref=NCBI_GP:RJP83776.1;Name=RJP83776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445443.1;locus_tag=C5O68_02755;product=diaminopimelate decarboxylase;protein_id=RJP83776.1;transl_table=11 PTQV01000016.1 Genbank gene 42783 43610 . - . ID=gene-C5O68_02760;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=C5O68_02760 PTQV01000016.1 Protein Homology CDS 42783 43610 . - 0 ID=cds-RJP83777.1;Parent=gene-C5O68_02760;Dbxref=NCBI_GP:RJP83777.1;Name=RJP83777.1;gbkey=CDS;gene=purR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359385.1;locus_tag=C5O68_02760;product=pur operon repressor;protein_id=RJP83777.1;transl_table=11 PTQV01000016.1 Genbank gene 43576 43872 . + . ID=gene-C5O68_02765;Name=C5O68_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02765 PTQV01000016.1 Protein Homology CDS 43576 43872 . + 0 ID=cds-RJP83778.1;Parent=gene-C5O68_02765;Dbxref=NCBI_GP:RJP83778.1;Name=RJP83778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843947.1;locus_tag=C5O68_02765;product=hypothetical protein;protein_id=RJP83778.1;transl_table=11 PTQV01000016.1 Genbank gene 43874 44818 . - . ID=gene-C5O68_02770;Name=C5O68_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02770 PTQV01000016.1 Protein Homology CDS 43874 44818 . - 0 ID=cds-RJP83779.1;Parent=gene-C5O68_02770;Dbxref=NCBI_GP:RJP83779.1;Name=RJP83779.1;Note=catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703190.1;locus_tag=C5O68_02770;product=HD domain-containing protein;protein_id=RJP83779.1;transl_table=11 PTQV01000016.1 Genbank gene 44808 46106 . - . ID=gene-C5O68_02775;Name=C5O68_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02775 PTQV01000016.1 Protein Homology CDS 44808 46106 . - 0 ID=cds-RJP83780.1;Parent=gene-C5O68_02775;Dbxref=NCBI_GP:RJP83780.1;Name=RJP83780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445439.1;locus_tag=C5O68_02775;product=DNA recombination protein RmuC;protein_id=RJP83780.1;transl_table=11 PTQV01000016.1 Genbank gene 46066 46728 . - . ID=gene-C5O68_02780;Name=C5O68_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02780 PTQV01000016.1 Protein Homology CDS 46066 46728 . - 0 ID=cds-RJP83781.1;Parent=gene-C5O68_02780;Dbxref=NCBI_GP:RJP83781.1;Name=RJP83781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445438.1;locus_tag=C5O68_02780;product=thiamine diphosphokinase;protein_id=RJP83781.1;transl_table=11 PTQV01000016.1 Genbank gene 46691 47347 . - . ID=gene-C5O68_02785;Name=C5O68_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02785 PTQV01000016.1 Protein Homology CDS 46691 47347 . - 0 ID=cds-RJP83782.1;Parent=gene-C5O68_02785;Dbxref=NCBI_GP:RJP83782.1;Name=RJP83782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359389.1;locus_tag=C5O68_02785;product=ribulose-phosphate 3-epimerase;protein_id=RJP83782.1;transl_table=11 PTQV01000016.1 Genbank gene 47358 48236 . - . ID=gene-C5O68_02790;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=C5O68_02790 PTQV01000016.1 Protein Homology CDS 47358 48236 . - 0 ID=cds-RJP83783.1;Parent=gene-C5O68_02790;Dbxref=NCBI_GP:RJP83783.1;Name=RJP83783.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359390.1;locus_tag=C5O68_02790;product=ribosome small subunit-dependent GTPase A;protein_id=RJP83783.1;transl_table=11 PTQV01000016.1 Genbank gene 48437 48835 . - . ID=gene-C5O68_02795;Name=C5O68_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02795 PTQV01000016.1 Protein Homology CDS 48437 48835 . - 0 ID=cds-RJP83784.1;Parent=gene-C5O68_02795;Dbxref=NCBI_GP:RJP83784.1;Name=RJP83784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230068.1;locus_tag=C5O68_02795;product=hypothetical protein;protein_id=RJP83784.1;transl_table=11 PTQV01000016.1 Genbank gene 48829 49602 . - . ID=gene-C5O68_02800;Name=C5O68_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02800 PTQV01000016.1 Protein Homology CDS 48829 49602 . - 0 ID=cds-RJP83785.1;Parent=gene-C5O68_02800;Dbxref=NCBI_GP:RJP83785.1;Name=RJP83785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227792.1;locus_tag=C5O68_02800;product=cell surface protein;protein_id=RJP83785.1;transl_table=11 PTQV01000016.1 Genbank gene 50292 51164 . - . ID=gene-C5O68_02805;Name=C5O68_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02805 PTQV01000016.1 Protein Homology CDS 50292 51164 . - 0 ID=cds-RJP83786.1;Parent=gene-C5O68_02805;Dbxref=NCBI_GP:RJP83786.1;Name=RJP83786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445435.1;locus_tag=C5O68_02805;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=RJP83786.1;transl_table=11 PTQV01000016.1 Genbank gene 51416 51715 . - . ID=gene-C5O68_02810;Name=C5O68_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02810 PTQV01000016.1 Protein Homology CDS 51416 51715 . - 0 ID=cds-RJP83787.1;Parent=gene-C5O68_02810;Dbxref=NCBI_GP:RJP83787.1;Name=RJP83787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359392.1;locus_tag=C5O68_02810;product=hypothetical protein;protein_id=RJP83787.1;transl_table=11 PTQV01000016.1 Genbank gene 51702 52343 . - . ID=gene-C5O68_02815;Name=C5O68_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02815 PTQV01000016.1 Protein Homology CDS 51702 52343 . - 0 ID=cds-RJP83788.1;Parent=gene-C5O68_02815;Dbxref=NCBI_GP:RJP83788.1;Name=RJP83788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359393.1;locus_tag=C5O68_02815;product=peptide ABC transporter ATP-binding protein;protein_id=RJP83788.1;transl_table=11 PTQV01000016.1 Genbank gene 52345 54387 . - . ID=gene-C5O68_02820;Name=C5O68_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02820 PTQV01000016.1 Protein Homology CDS 52345 54387 . - 0 ID=cds-RJP83789.1;Parent=gene-C5O68_02820;Dbxref=NCBI_GP:RJP83789.1;Name=RJP83789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359394.1;locus_tag=C5O68_02820;product=bacteriocin-associated protein;protein_id=RJP83789.1;transl_table=11 PTQV01000016.1 Genbank gene 55446 56345 . - . ID=gene-C5O68_02825;Name=C5O68_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02825 PTQV01000016.1 Protein Homology CDS 55446 56345 . - 0 ID=cds-RJP83790.1;Parent=gene-C5O68_02825;Dbxref=NCBI_GP:RJP83790.1;Name=RJP83790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359395.1;locus_tag=C5O68_02825;product=transcriptional regulator;protein_id=RJP83790.1;transl_table=11 PTQV01000016.1 Genbank gene 56417 56977 . - . ID=gene-C5O68_02830;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=C5O68_02830 PTQV01000016.1 Protein Homology CDS 56417 56977 . - 0 ID=cds-RJP83791.1;Parent=gene-C5O68_02830;Dbxref=NCBI_GP:RJP83791.1;Name=RJP83791.1;gbkey=CDS;gene=rnmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359396.1;locus_tag=C5O68_02830;product=ribonuclease M5;protein_id=RJP83791.1;transl_table=11 PTQV01000016.1 Genbank gene 56977 57750 . - . ID=gene-C5O68_02835;Name=C5O68_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02835 PTQV01000016.1 Protein Homology CDS 56977 57750 . - 0 ID=cds-RJP83792.1;Parent=gene-C5O68_02835;Dbxref=NCBI_GP:RJP83792.1;Name=RJP83792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359397.1;locus_tag=C5O68_02835;product=hydrolase TatD;protein_id=RJP83792.1;transl_table=11 PTQV01000016.1 Genbank pseudogene 57729 57938 . + . ID=gene-C5O68_02840;Name=C5O68_02840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02840;pseudo=true PTQV01000016.1 Protein Homology CDS 57729 57938 . + 0 ID=cds-C5O68_02840;Parent=gene-C5O68_02840;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844424.1;locus_tag=C5O68_02840;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000016.1 Genbank pseudogene 58052 58186 . - . ID=gene-C5O68_02845;Name=C5O68_02845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02845;pseudo=true PTQV01000016.1 Protein Homology CDS 58052 58186 . - 0 ID=cds-C5O68_02845;Parent=gene-C5O68_02845;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359398.1;locus_tag=C5O68_02845;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000016.1 Genbank gene 58438 59694 . + . ID=gene-C5O68_02850;Name=C5O68_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02850 PTQV01000016.1 Protein Homology CDS 58438 59694 . + 0 ID=cds-RJP83793.1;Parent=gene-C5O68_02850;Dbxref=NCBI_GP:RJP83793.1;Name=RJP83793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=C5O68_02850;product=ISL3 family transposase;protein_id=RJP83793.1;transl_table=11 PTQV01000016.1 Genbank gene 59869 60349 . - . ID=gene-C5O68_02855;Name=C5O68_02855;end_range=60349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02855;partial=true PTQV01000016.1 Protein Homology CDS 59869 60349 . - 1 ID=cds-RJP83794.1;Parent=gene-C5O68_02855;Dbxref=NCBI_GP:RJP83794.1;Name=RJP83794.1;end_range=60349,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00746.19;locus_tag=C5O68_02855;partial=true;product=hypothetical protein;protein_id=RJP83794.1;transl_table=11 ##sequence-region PTQV01000017.1 1 903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000017.1 Genbank region 1 903 . + . ID=PTQV01000017.1:1..903;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000017.1 Genbank gene 6 79 . - . ID=gene-C5O68_02860;Name=C5O68_02860;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02860 PTQV01000017.1 tRNAscan-SE tRNA 6 79 . - . ID=rna-C5O68_02860;Parent=gene-C5O68_02860;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02860;product=tRNA-Pro PTQV01000017.1 tRNAscan-SE exon 6 79 . - . ID=exon-C5O68_02860-1;Parent=rna-C5O68_02860;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02860;product=tRNA-Pro PTQV01000017.1 Genbank gene 95 168 . - . ID=gene-C5O68_02865;Name=C5O68_02865;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02865 PTQV01000017.1 tRNAscan-SE tRNA 95 168 . - . ID=rna-C5O68_02865;Parent=gene-C5O68_02865;anticodon=(pos:complement(132..134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02865;product=tRNA-Arg PTQV01000017.1 tRNAscan-SE exon 95 168 . - . ID=exon-C5O68_02865-1;Parent=rna-C5O68_02865;anticodon=(pos:complement(132..134));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02865;product=tRNA-Arg PTQV01000017.1 Genbank gene 180 265 . - . ID=gene-C5O68_02870;Name=C5O68_02870;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02870 PTQV01000017.1 tRNAscan-SE tRNA 180 265 . - . ID=rna-C5O68_02870;Parent=gene-C5O68_02870;anticodon=(pos:complement(229..231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02870;product=tRNA-Leu PTQV01000017.1 tRNAscan-SE exon 180 265 . - . ID=exon-C5O68_02870-1;Parent=rna-C5O68_02870;anticodon=(pos:complement(229..231));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02870;product=tRNA-Leu PTQV01000017.1 Genbank gene 273 344 . - . ID=gene-C5O68_02875;Name=C5O68_02875;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02875 PTQV01000017.1 tRNAscan-SE tRNA 273 344 . - . ID=rna-C5O68_02875;Parent=gene-C5O68_02875;anticodon=(pos:complement(310..312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02875;product=tRNA-Gly PTQV01000017.1 tRNAscan-SE exon 273 344 . - . ID=exon-C5O68_02875-1;Parent=rna-C5O68_02875;anticodon=(pos:complement(310..312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02875;product=tRNA-Gly PTQV01000017.1 Genbank gene 367 439 . - . ID=gene-C5O68_02880;Name=C5O68_02880;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02880 PTQV01000017.1 tRNAscan-SE tRNA 367 439 . - . ID=rna-C5O68_02880;Parent=gene-C5O68_02880;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02880;product=tRNA-Thr PTQV01000017.1 tRNAscan-SE exon 367 439 . - . ID=exon-C5O68_02880-1;Parent=rna-C5O68_02880;anticodon=(pos:complement(404..406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02880;product=tRNA-Thr PTQV01000017.1 Genbank gene 458 539 . - . ID=gene-C5O68_02885;Name=C5O68_02885;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02885 PTQV01000017.1 tRNAscan-SE tRNA 458 539 . - . ID=rna-C5O68_02885;Parent=gene-C5O68_02885;anticodon=(pos:complement(503..505));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02885;product=tRNA-Leu PTQV01000017.1 tRNAscan-SE exon 458 539 . - . ID=exon-C5O68_02885-1;Parent=rna-C5O68_02885;anticodon=(pos:complement(503..505));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02885;product=tRNA-Leu PTQV01000017.1 Genbank gene 545 617 . - . ID=gene-C5O68_02890;Name=C5O68_02890;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02890 PTQV01000017.1 tRNAscan-SE tRNA 545 617 . - . ID=rna-C5O68_02890;Parent=gene-C5O68_02890;anticodon=(pos:complement(582..584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02890;product=tRNA-Lys PTQV01000017.1 tRNAscan-SE exon 545 617 . - . ID=exon-C5O68_02890-1;Parent=rna-C5O68_02890;anticodon=(pos:complement(582..584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02890;product=tRNA-Lys PTQV01000017.1 Genbank gene 642 714 . - . ID=gene-C5O68_02895;Name=C5O68_02895;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02895 PTQV01000017.1 tRNAscan-SE tRNA 642 714 . - . ID=rna-C5O68_02895;Parent=gene-C5O68_02895;anticodon=(pos:complement(679..681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02895;product=tRNA-Asp PTQV01000017.1 tRNAscan-SE exon 642 714 . - . ID=exon-C5O68_02895-1;Parent=rna-C5O68_02895;anticodon=(pos:complement(679..681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02895;product=tRNA-Asp PTQV01000017.1 Genbank gene 717 789 . - . ID=gene-C5O68_02900;Name=C5O68_02900;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02900 PTQV01000017.1 tRNAscan-SE tRNA 717 789 . - . ID=rna-C5O68_02900;Parent=gene-C5O68_02900;anticodon=(pos:complement(754..756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02900;product=tRNA-Val PTQV01000017.1 tRNAscan-SE exon 717 789 . - . ID=exon-C5O68_02900-1;Parent=rna-C5O68_02900;anticodon=(pos:complement(754..756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02900;product=tRNA-Val PTQV01000017.1 Genbank gene 794 903 . - . ID=gene-C5O68_02905;Name=rrf;end_range=903,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C5O68_02905;partial=true PTQV01000017.1 cmsearch rRNA 794 903 . - . ID=rna-C5O68_02905;Parent=gene-C5O68_02905;Dbxref=RFAM:RF00001;end_range=903,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02905;partial=true;product=5S ribosomal RNA PTQV01000017.1 cmsearch exon 794 903 . - . ID=exon-C5O68_02905-1;Parent=rna-C5O68_02905;Dbxref=RFAM:RF00001;end_range=903,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02905;partial=true;product=5S ribosomal RNA ##sequence-region PTQV01000018.1 1 5242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000018.1 Genbank region 1 5242 . + . ID=PTQV01000018.1:1..5242;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000018.1 Genbank gene 280 1831 . + . ID=gene-C5O68_02910;Name=C5O68_02910;gbkey=Gene;gene_biotype=rRNA;locus_tag=C5O68_02910 PTQV01000018.1 Genbank rRNA 280 1831 . + . ID=rna-C5O68_02910;Parent=gene-C5O68_02910;gbkey=rRNA;locus_tag=C5O68_02910;product=16S ribosomal RNA PTQV01000018.1 Genbank exon 280 1831 . + . ID=exon-C5O68_02910-1;Parent=rna-C5O68_02910;gbkey=rRNA;locus_tag=C5O68_02910;product=16S ribosomal RNA PTQV01000018.1 Genbank gene 1876 1948 . + . ID=gene-C5O68_02915;Name=C5O68_02915;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02915 PTQV01000018.1 tRNAscan-SE tRNA 1876 1948 . + . ID=rna-C5O68_02915;Parent=gene-C5O68_02915;anticodon=(pos:1909..1911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02915;product=tRNA-Ala PTQV01000018.1 tRNAscan-SE exon 1876 1948 . + . ID=exon-C5O68_02915-1;Parent=rna-C5O68_02915;anticodon=(pos:1909..1911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02915;product=tRNA-Ala PTQV01000018.1 Genbank gene 2072 4974 . + . ID=gene-C5O68_02920;Name=C5O68_02920;gbkey=Gene;gene_biotype=rRNA;locus_tag=C5O68_02920 PTQV01000018.1 Genbank rRNA 2072 4974 . + . ID=rna-C5O68_02920;Parent=gene-C5O68_02920;gbkey=rRNA;locus_tag=C5O68_02920;product=23S ribosomal RNA PTQV01000018.1 Genbank exon 2072 4974 . + . ID=exon-C5O68_02920-1;Parent=rna-C5O68_02920;gbkey=rRNA;locus_tag=C5O68_02920;product=23S ribosomal RNA PTQV01000018.1 Genbank gene 5050 5165 . + . ID=gene-C5O68_02925;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=C5O68_02925 PTQV01000018.1 cmsearch rRNA 5050 5165 . + . ID=rna-C5O68_02925;Parent=gene-C5O68_02925;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02925;product=5S ribosomal RNA PTQV01000018.1 cmsearch exon 5050 5165 . + . ID=exon-C5O68_02925-1;Parent=rna-C5O68_02925;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_02925;product=5S ribosomal RNA PTQV01000018.1 Genbank gene 5170 5242 . + . ID=gene-C5O68_02930;Name=C5O68_02930;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_02930 PTQV01000018.1 tRNAscan-SE tRNA 5170 5242 . + . ID=rna-C5O68_02930;Parent=gene-C5O68_02930;anticodon=(pos:5203..5205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02930;product=tRNA-Val PTQV01000018.1 tRNAscan-SE exon 5170 5242 . + . ID=exon-C5O68_02930-1;Parent=rna-C5O68_02930;anticodon=(pos:5203..5205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_02930;product=tRNA-Val ##sequence-region PTQV01000019.1 1 38392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000019.1 Genbank region 1 38392 . + . ID=PTQV01000019.1:1..38392;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000019.1 Genbank gene 25 1551 . - . ID=gene-C5O68_02935;Name=C5O68_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02935 PTQV01000019.1 Protein Homology CDS 25 1551 . - 0 ID=cds-RJP83641.1;Parent=gene-C5O68_02935;Dbxref=NCBI_GP:RJP83641.1;Name=RJP83641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547411.1;locus_tag=C5O68_02935;product=DDE transposase;protein_id=RJP83641.1;transl_table=11 PTQV01000019.1 Genbank pseudogene 1738 1812 . - . ID=gene-C5O68_02940;Name=C5O68_02940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_02940;pseudo=true PTQV01000019.1 Protein Homology CDS 1738 1812 . - 0 ID=cds-C5O68_02940;Parent=gene-C5O68_02940;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_02940;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000019.1 Genbank gene 1808 2356 . - . ID=gene-C5O68_02945;Name=C5O68_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02945 PTQV01000019.1 Protein Homology CDS 1808 2356 . - 0 ID=cds-RJP83642.1;Parent=gene-C5O68_02945;Dbxref=NCBI_GP:RJP83642.1;Name=RJP83642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446632.1;locus_tag=C5O68_02945;product=NAD(P)H-dependent oxidoreductase;protein_id=RJP83642.1;transl_table=11 PTQV01000019.1 Genbank gene 2447 2638 . - . ID=gene-C5O68_02950;Name=C5O68_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02950 PTQV01000019.1 Protein Homology CDS 2447 2638 . - 0 ID=cds-RJP83643.1;Parent=gene-C5O68_02950;Dbxref=NCBI_GP:RJP83643.1;Name=RJP83643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828169.1;locus_tag=C5O68_02950;product=hypothetical protein;protein_id=RJP83643.1;transl_table=11 PTQV01000019.1 Genbank gene 2671 3102 . + . ID=gene-C5O68_02955;Name=C5O68_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02955 PTQV01000019.1 Protein Homology CDS 2671 3102 . + 0 ID=cds-RJP83644.1;Parent=gene-C5O68_02955;Dbxref=NCBI_GP:RJP83644.1;Name=RJP83644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446630.1;locus_tag=C5O68_02955;product=peptidase;protein_id=RJP83644.1;transl_table=11 PTQV01000019.1 Genbank gene 3099 4286 . + . ID=gene-C5O68_02960;Name=C5O68_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02960 PTQV01000019.1 Protein Homology CDS 3099 4286 . + 0 ID=cds-RJP83645.1;Parent=gene-C5O68_02960;Dbxref=NCBI_GP:RJP83645.1;Name=RJP83645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446629.1;locus_tag=C5O68_02960;product=aspartate aminotransferase;protein_id=RJP83645.1;transl_table=11 PTQV01000019.1 Genbank gene 4279 4644 . + . ID=gene-C5O68_02965;Name=C5O68_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02965 PTQV01000019.1 Protein Homology CDS 4279 4644 . + 0 ID=cds-RJP83646.1;Parent=gene-C5O68_02965;Dbxref=NCBI_GP:RJP83646.1;Name=RJP83646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446628.1;locus_tag=C5O68_02965;product=VOC family protein;protein_id=RJP83646.1;transl_table=11 PTQV01000019.1 Genbank gene 4664 6007 . + . ID=gene-C5O68_02970;Name=C5O68_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02970 PTQV01000019.1 Protein Homology CDS 4664 6007 . + 0 ID=cds-RJP83647.1;Parent=gene-C5O68_02970;Dbxref=NCBI_GP:RJP83647.1;Name=RJP83647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446627.1;locus_tag=C5O68_02970;product=asparagine--tRNA ligase;protein_id=RJP83647.1;transl_table=11 PTQV01000019.1 Genbank gene 6160 6450 . + . ID=gene-C5O68_02975;Name=C5O68_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02975 PTQV01000019.1 Protein Homology CDS 6160 6450 . + 0 ID=cds-RJP83648.1;Parent=gene-C5O68_02975;Dbxref=NCBI_GP:RJP83648.1;Name=RJP83648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446625.1;locus_tag=C5O68_02975;product=30S ribosomal protein S6;protein_id=RJP83648.1;transl_table=11 PTQV01000019.1 Genbank gene 6462 6932 . + . ID=gene-C5O68_02980;Name=C5O68_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02980 PTQV01000019.1 Protein Homology CDS 6462 6932 . + 0 ID=cds-RJP83649.1;Parent=gene-C5O68_02980;Dbxref=NCBI_GP:RJP83649.1;Name=RJP83649.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446624.1;locus_tag=C5O68_02980;product=single-stranded DNA-binding protein;protein_id=RJP83649.1;transl_table=11 PTQV01000019.1 Genbank gene 6964 7203 . + . ID=gene-C5O68_02985;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=C5O68_02985 PTQV01000019.1 Protein Homology CDS 6964 7203 . + 0 ID=cds-RJP83650.1;Parent=gene-C5O68_02985;Dbxref=NCBI_GP:RJP83650.1;Name=RJP83650.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002983142.1;locus_tag=C5O68_02985;product=30S ribosomal protein S18;protein_id=RJP83650.1;transl_table=11 PTQV01000019.1 Genbank gene 7427 7930 . + . ID=gene-C5O68_02990;Name=C5O68_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02990 PTQV01000019.1 Protein Homology CDS 7427 7930 . + 0 ID=cds-RJP83651.1;Parent=gene-C5O68_02990;Dbxref=NCBI_GP:RJP83651.1;Name=RJP83651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006152325.1;locus_tag=C5O68_02990;product=N-acetyltransferase;protein_id=RJP83651.1;transl_table=11 PTQV01000019.1 Genbank gene 8012 9412 . + . ID=gene-C5O68_02995;Name=C5O68_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_02995 PTQV01000019.1 Protein Homology CDS 8012 9412 . + 0 ID=cds-RJP83652.1;Parent=gene-C5O68_02995;Dbxref=NCBI_GP:RJP83652.1;Name=RJP83652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446622.1;locus_tag=C5O68_02995;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP83652.1;transl_table=11 PTQV01000019.1 Genbank gene 9414 9773 . + . ID=gene-C5O68_03000;Name=C5O68_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03000 PTQV01000019.1 Protein Homology CDS 9414 9773 . + 0 ID=cds-RJP83653.1;Parent=gene-C5O68_03000;Dbxref=NCBI_GP:RJP83653.1;Name=RJP83653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446621.1;locus_tag=C5O68_03000;product=RNA-binding protein;protein_id=RJP83653.1;transl_table=11 PTQV01000019.1 Genbank gene 9827 10576 . + . ID=gene-C5O68_03005;Name=C5O68_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03005 PTQV01000019.1 Protein Homology CDS 9827 10576 . + 0 ID=cds-RJP83654.1;Parent=gene-C5O68_03005;Dbxref=NCBI_GP:RJP83654.1;Name=RJP83654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390770.1;locus_tag=C5O68_03005;product=SAM-dependent methyltransferase;protein_id=RJP83654.1;transl_table=11 PTQV01000019.1 Genbank gene 10566 10853 . + . ID=gene-C5O68_03010;Name=C5O68_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03010 PTQV01000019.1 Protein Homology CDS 10566 10853 . + 0 ID=cds-RJP83655.1;Parent=gene-C5O68_03010;Dbxref=NCBI_GP:RJP83655.1;Name=RJP83655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358983.1;locus_tag=C5O68_03010;product=hypothetical protein;protein_id=RJP83655.1;transl_table=11 PTQV01000019.1 Genbank gene 10936 11871 . + . ID=gene-C5O68_03015;Name=C5O68_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03015 PTQV01000019.1 Protein Homology CDS 10936 11871 . + 0 ID=cds-RJP83656.1;Parent=gene-C5O68_03015;Dbxref=NCBI_GP:RJP83656.1;Name=RJP83656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036024.1;locus_tag=C5O68_03015;product=manganese-dependent inorganic pyrophosphatase;protein_id=RJP83656.1;transl_table=11 PTQV01000019.1 Genbank gene 11958 12470 . + . ID=gene-C5O68_03020;Name=C5O68_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03020 PTQV01000019.1 Protein Homology CDS 11958 12470 . + 0 ID=cds-RJP83657.1;Parent=gene-C5O68_03020;Dbxref=NCBI_GP:RJP83657.1;Name=RJP83657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358981.1;locus_tag=C5O68_03020;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=RJP83657.1;transl_table=11 PTQV01000019.1 Genbank gene 12454 13104 . + . ID=gene-C5O68_03025;Name=C5O68_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03025 PTQV01000019.1 Protein Homology CDS 12454 13104 . + 0 ID=cds-RJP83658.1;Parent=gene-C5O68_03025;Dbxref=NCBI_GP:RJP83658.1;Name=RJP83658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446616.1;locus_tag=C5O68_03025;product=DUF1803 domain-containing protein;protein_id=RJP83658.1;transl_table=11 PTQV01000019.1 Genbank gene 13204 13401 . + . ID=gene-C5O68_03030;Name=C5O68_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03030 PTQV01000019.1 Protein Homology CDS 13204 13401 . + 0 ID=cds-RJP83659.1;Parent=gene-C5O68_03030;Dbxref=NCBI_GP:RJP83659.1;Name=RJP83659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051196.1;locus_tag=C5O68_03030;product=CsbD family protein;protein_id=RJP83659.1;transl_table=11 PTQV01000019.1 Genbank gene 13449 14894 . - . ID=gene-C5O68_03035;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=C5O68_03035 PTQV01000019.1 Protein Homology CDS 13449 14894 . - 0 ID=cds-RJP83660.1;Parent=gene-C5O68_03035;Dbxref=NCBI_GP:RJP83660.1;Name=RJP83660.1;gbkey=CDS;gene=murE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358977.1;locus_tag=C5O68_03035;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=RJP83660.1;transl_table=11 PTQV01000019.1 Genbank gene 15000 16622 . + . ID=gene-C5O68_03040;Name=C5O68_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03040 PTQV01000019.1 Protein Homology CDS 15000 16622 . + 0 ID=cds-RJP83661.1;Parent=gene-C5O68_03040;Dbxref=NCBI_GP:RJP83661.1;Name=RJP83661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358976.1;locus_tag=C5O68_03040;product=polysaccharide biosynthesis protein;protein_id=RJP83661.1;transl_table=11 PTQV01000019.1 Genbank gene 16829 18787 . + . ID=gene-C5O68_03045;Name=C5O68_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03045 PTQV01000019.1 Protein Homology CDS 16829 18787 . + 0 ID=cds-RJP83662.1;Parent=gene-C5O68_03045;Dbxref=NCBI_GP:RJP83662.1;Name=RJP83662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358975.1;locus_tag=C5O68_03045;product=peptide ABC transporter ATP-binding protein;protein_id=RJP83662.1;transl_table=11 PTQV01000019.1 Genbank gene 18981 20027 . + . ID=gene-C5O68_03050;Name=C5O68_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03050 PTQV01000019.1 GeneMarkS+ CDS 18981 20027 . + 0 ID=cds-RJP83663.1;Parent=gene-C5O68_03050;Dbxref=NCBI_GP:RJP83663.1;Name=RJP83663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_03050;product=hypothetical protein;protein_id=RJP83663.1;transl_table=11 PTQV01000019.1 Genbank gene 20037 21719 . + . ID=gene-C5O68_03055;Name=C5O68_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03055 PTQV01000019.1 Protein Homology CDS 20037 21719 . + 0 ID=cds-RJP83664.1;Parent=gene-C5O68_03055;Dbxref=NCBI_GP:RJP83664.1;Name=RJP83664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768988.1;locus_tag=C5O68_03055;product=ABC transporter ATP-binding protein;protein_id=RJP83664.1;transl_table=11 PTQV01000019.1 Genbank gene 21877 22971 . + . ID=gene-C5O68_03060;Name=C5O68_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03060 PTQV01000019.1 Protein Homology CDS 21877 22971 . + 0 ID=cds-RJP83665.1;Parent=gene-C5O68_03060;Dbxref=NCBI_GP:RJP83665.1;Name=RJP83665.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358970.1;locus_tag=C5O68_03060;product=cystathionine gamma-synthase;protein_id=RJP83665.1;transl_table=11 PTQV01000019.1 Genbank gene 22979 24145 . + . ID=gene-C5O68_03065;Name=C5O68_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03065 PTQV01000019.1 Protein Homology CDS 22979 24145 . + 0 ID=cds-RJP83666.1;Parent=gene-C5O68_03065;Dbxref=NCBI_GP:RJP83666.1;Name=RJP83666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446609.1;locus_tag=C5O68_03065;product=cysteine desulfurase;protein_id=RJP83666.1;transl_table=11 PTQV01000019.1 Genbank gene 24238 27336 . + . ID=gene-C5O68_03070;Name=C5O68_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03070 PTQV01000019.1 Protein Homology CDS 24238 27336 . + 0 ID=cds-RJP83667.1;Parent=gene-C5O68_03070;Dbxref=NCBI_GP:RJP83667.1;Name=RJP83667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358968.1;locus_tag=C5O68_03070;product=RNA helicase;protein_id=RJP83667.1;transl_table=11 PTQV01000019.1 Genbank gene 27384 28001 . + . ID=gene-C5O68_03075;Name=C5O68_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03075 PTQV01000019.1 Protein Homology CDS 27384 28001 . + 0 ID=cds-RJP83668.1;Parent=gene-C5O68_03075;Dbxref=NCBI_GP:RJP83668.1;Name=RJP83668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358967.1;locus_tag=C5O68_03075;product=cystathionine gamma-synthase;protein_id=RJP83668.1;transl_table=11 PTQV01000019.1 Genbank gene 28013 29347 . + . ID=gene-C5O68_03080;Name=C5O68_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03080 PTQV01000019.1 Protein Homology CDS 28013 29347 . + 0 ID=cds-RJP83669.1;Parent=gene-C5O68_03080;Dbxref=NCBI_GP:RJP83669.1;Name=RJP83669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358966.1;locus_tag=C5O68_03080;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=RJP83669.1;transl_table=11 PTQV01000019.1 Genbank gene 29357 29821 . + . ID=gene-C5O68_03085;Name=C5O68_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03085 PTQV01000019.1 Protein Homology CDS 29357 29821 . + 0 ID=cds-RJP83670.1;Parent=gene-C5O68_03085;Dbxref=NCBI_GP:RJP83670.1;Name=RJP83670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358965.1;locus_tag=C5O68_03085;product=N-acetyltransferase;protein_id=RJP83670.1;transl_table=11 PTQV01000019.1 Genbank gene 29818 30312 . + . ID=gene-C5O68_03090;Name=C5O68_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03090 PTQV01000019.1 Protein Homology CDS 29818 30312 . + 0 ID=cds-RJP83671.1;Parent=gene-C5O68_03090;Dbxref=NCBI_GP:RJP83671.1;Name=RJP83671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358964.1;locus_tag=C5O68_03090;product=GNAT family N-acetyltransferase;protein_id=RJP83671.1;transl_table=11 PTQV01000019.1 Genbank gene 30393 32057 . + . ID=gene-C5O68_03095;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=C5O68_03095 PTQV01000019.1 Protein Homology CDS 30393 32057 . + 0 ID=cds-RJP83672.1;Parent=gene-C5O68_03095;Dbxref=NCBI_GP:RJP83672.1;Name=RJP83672.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291668.1;locus_tag=C5O68_03095;product=endolytic transglycosylase MltG;protein_id=RJP83672.1;transl_table=11 PTQV01000019.1 Genbank gene 32119 32601 . + . ID=gene-C5O68_03100;Name=C5O68_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03100 PTQV01000019.1 Protein Homology CDS 32119 32601 . + 0 ID=cds-RJP83673.1;Parent=gene-C5O68_03100;Dbxref=NCBI_GP:RJP83673.1;Name=RJP83673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018370745.1;locus_tag=C5O68_03100;product=transcription elongation factor GreA;protein_id=RJP83673.1;transl_table=11 PTQV01000019.1 Genbank gene 32845 33312 . + . ID=gene-C5O68_03105;Name=C5O68_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03105 PTQV01000019.1 Protein Homology CDS 32845 33312 . + 0 ID=cds-RJP83674.1;Parent=gene-C5O68_03105;Dbxref=NCBI_GP:RJP83674.1;Name=RJP83674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358961.1;locus_tag=C5O68_03105;product=N-acetyltransferase;protein_id=RJP83674.1;transl_table=11 PTQV01000019.1 Genbank gene 33742 33942 . + . ID=gene-C5O68_03110;Name=C5O68_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03110 PTQV01000019.1 Protein Homology CDS 33742 33942 . + 0 ID=cds-RJP83675.1;Parent=gene-C5O68_03110;Dbxref=NCBI_GP:RJP83675.1;Name=RJP83675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358959.1;locus_tag=C5O68_03110;product=ATP synthase subunit C;protein_id=RJP83675.1;transl_table=11 PTQV01000019.1 Genbank gene 33977 34693 . + . ID=gene-C5O68_03115;Name=C5O68_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03115 PTQV01000019.1 Protein Homology CDS 33977 34693 . + 0 ID=cds-RJP83676.1;Parent=gene-C5O68_03115;Dbxref=NCBI_GP:RJP83676.1;Name=RJP83676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358958.1;locus_tag=C5O68_03115;product=ATP synthase subunit A;protein_id=RJP83676.1;transl_table=11 PTQV01000019.1 Genbank gene 34707 35201 . + . ID=gene-C5O68_03120;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=C5O68_03120 PTQV01000019.1 Protein Homology CDS 34707 35201 . + 0 ID=cds-RJP83677.1;Parent=gene-C5O68_03120;Dbxref=NCBI_GP:RJP83677.1;Name=RJP83677.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446421.1;locus_tag=C5O68_03120;product=ATP synthase F0 subunit B;protein_id=RJP83677.1;transl_table=11 PTQV01000019.1 Genbank gene 35201 35737 . + . ID=gene-C5O68_03125;Name=C5O68_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03125 PTQV01000019.1 Protein Homology CDS 35201 35737 . + 0 ID=cds-RJP83678.1;Parent=gene-C5O68_03125;Dbxref=NCBI_GP:RJP83678.1;Name=RJP83678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358956.1;locus_tag=C5O68_03125;product=F0F1 ATP synthase subunit delta;protein_id=RJP83678.1;transl_table=11 PTQV01000019.1 Genbank gene 35752 37257 . + . ID=gene-C5O68_03130;Name=C5O68_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03130 PTQV01000019.1 Protein Homology CDS 35752 37257 . + 0 ID=cds-RJP83679.1;Parent=gene-C5O68_03130;Dbxref=NCBI_GP:RJP83679.1;Name=RJP83679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446419.1;locus_tag=C5O68_03130;product=F0F1 ATP synthase subunit alpha;protein_id=RJP83679.1;transl_table=11 PTQV01000019.1 Genbank gene 37273 38151 . + . ID=gene-C5O68_03135;Name=C5O68_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03135 PTQV01000019.1 Protein Homology CDS 37273 38151 . + 0 ID=cds-RJP83680.1;Parent=gene-C5O68_03135;Dbxref=NCBI_GP:RJP83680.1;Name=RJP83680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358954.1;locus_tag=C5O68_03135;product=F0F1 ATP synthase subunit gamma;protein_id=RJP83680.1;transl_table=11 ##sequence-region PTQV01000001.1 1 53654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000001.1 Genbank region 1 53654 . + . ID=PTQV01000001.1:1..53654;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000001.1 Genbank gene 1 915 . + . ID=gene-C5O68_00005;Name=C5O68_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00005;partial=true;start_range=.,1 PTQV01000001.1 Protein Homology CDS 1 915 . + 0 ID=cds-RJP84808.1;Parent=gene-C5O68_00005;Dbxref=NCBI_GP:RJP84808.1;Name=RJP84808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453780.1;locus_tag=C5O68_00005;partial=true;product=DNA primase;protein_id=RJP84808.1;start_range=.,1;transl_table=11 PTQV01000001.1 Genbank gene 1306 1830 . + . ID=gene-C5O68_00010;Name=C5O68_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00010 PTQV01000001.1 Protein Homology CDS 1306 1830 . + 0 ID=cds-RJP84809.1;Parent=gene-C5O68_00010;Dbxref=NCBI_GP:RJP84809.1;Name=RJP84809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173105.1;locus_tag=C5O68_00010;product=hypothetical protein;protein_id=RJP84809.1;transl_table=11 PTQV01000001.1 Genbank gene 1904 2407 . + . ID=gene-C5O68_00015;Name=C5O68_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00015 PTQV01000001.1 Protein Homology CDS 1904 2407 . + 0 ID=cds-RJP84810.1;Parent=gene-C5O68_00015;Dbxref=NCBI_GP:RJP84810.1;Name=RJP84810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447098.1;locus_tag=C5O68_00015;product=hypothetical protein;protein_id=RJP84810.1;transl_table=11 PTQV01000001.1 Genbank gene 2715 3134 . + . ID=gene-C5O68_00020;Name=C5O68_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00020 PTQV01000001.1 Protein Homology CDS 2715 3134 . + 0 ID=cds-RJP84811.1;Parent=gene-C5O68_00020;Dbxref=NCBI_GP:RJP84811.1;Name=RJP84811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255097.1;locus_tag=C5O68_00020;product=DUF1492 domain-containing protein;protein_id=RJP84811.1;transl_table=11 PTQV01000001.1 Genbank gene 3134 3526 . + . ID=gene-C5O68_00025;Name=C5O68_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00025 PTQV01000001.1 Protein Homology CDS 3134 3526 . + 0 ID=cds-RJP84812.1;Parent=gene-C5O68_00025;Dbxref=NCBI_GP:RJP84812.1;Name=RJP84812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447096.1;locus_tag=C5O68_00025;product=transcriptional regulator;protein_id=RJP84812.1;transl_table=11 PTQV01000001.1 Genbank gene 3989 6820 . + . ID=gene-C5O68_00030;Name=C5O68_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00030 PTQV01000001.1 Protein Homology CDS 3989 6820 . + 0 ID=cds-RJP84813.1;Parent=gene-C5O68_00030;Dbxref=NCBI_GP:RJP84813.1;Name=RJP84813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447021.1;locus_tag=C5O68_00030;product=excinuclease ABC subunit UvrA;protein_id=RJP84813.1;transl_table=11 PTQV01000001.1 Genbank gene 6813 7874 . + . ID=gene-C5O68_00035;Name=C5O68_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00035 PTQV01000001.1 Protein Homology CDS 6813 7874 . + 0 ID=cds-RJP84814.1;Parent=gene-C5O68_00035;Dbxref=NCBI_GP:RJP84814.1;Name=RJP84814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447020.1;locus_tag=C5O68_00035;product=aminopeptidase P family protein;protein_id=RJP84814.1;transl_table=11 PTQV01000001.1 Genbank gene 7879 7971 . + . ID=gene-C5O68_00040;Name=C5O68_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00040 PTQV01000001.1 Protein Homology CDS 7879 7971 . + 0 ID=cds-RJP84815.1;Parent=gene-C5O68_00040;Dbxref=NCBI_GP:RJP84815.1;Name=RJP84815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808829.1;locus_tag=C5O68_00040;product=excinuclease ABC subunit A;protein_id=RJP84815.1;transl_table=11 PTQV01000001.1 Genbank gene 8006 8404 . + . ID=gene-C5O68_00045;Name=C5O68_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00045 PTQV01000001.1 Protein Homology CDS 8006 8404 . + 0 ID=cds-RJP84816.1;Parent=gene-C5O68_00045;Dbxref=NCBI_GP:RJP84816.1;Name=RJP84816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357767.1;locus_tag=C5O68_00045;product=transcriptional regulator Spx;protein_id=RJP84816.1;transl_table=11 PTQV01000001.1 Genbank gene 8470 9039 . + . ID=gene-C5O68_00050;Name=C5O68_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00050 PTQV01000001.1 Protein Homology CDS 8470 9039 . + 0 ID=cds-RJP84817.1;Parent=gene-C5O68_00050;Dbxref=NCBI_GP:RJP84817.1;Name=RJP84817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447017.1;locus_tag=C5O68_00050;product=transcriptional regulator;protein_id=RJP84817.1;transl_table=11 PTQV01000001.1 Genbank gene 9126 9392 . + . ID=gene-C5O68_00055;Name=C5O68_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00055 PTQV01000001.1 Protein Homology CDS 9126 9392 . + 0 ID=cds-RJP84818.1;Parent=gene-C5O68_00055;Dbxref=NCBI_GP:RJP84818.1;Name=RJP84818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357769.1;locus_tag=C5O68_00055;product=IreB family regulatory phosphoprotein;protein_id=RJP84818.1;transl_table=11 PTQV01000001.1 Genbank gene 9396 9815 . + . ID=gene-C5O68_00060;Name=C5O68_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00060 PTQV01000001.1 Protein Homology CDS 9396 9815 . + 0 ID=cds-RJP84819.1;Parent=gene-C5O68_00060;Dbxref=NCBI_GP:RJP84819.1;Name=RJP84819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357770.1;locus_tag=C5O68_00060;product=Holliday junction resolvase RuvX;protein_id=RJP84819.1;transl_table=11 PTQV01000001.1 Genbank gene 9831 10136 . + . ID=gene-C5O68_00065;Name=C5O68_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00065 PTQV01000001.1 Protein Homology CDS 9831 10136 . + 0 ID=cds-RJP84820.1;Parent=gene-C5O68_00065;Dbxref=NCBI_GP:RJP84820.1;Name=RJP84820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357771.1;locus_tag=C5O68_00065;product=DUF1292 domain-containing protein;protein_id=RJP84820.1;transl_table=11 PTQV01000001.1 Genbank gene 10336 11592 . + . ID=gene-C5O68_00070;Name=C5O68_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00070 PTQV01000001.1 Protein Homology CDS 10336 11592 . + 0 ID=cds-RJP84821.1;Parent=gene-C5O68_00070;Dbxref=NCBI_GP:RJP84821.1;Name=RJP84821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357772.1;locus_tag=C5O68_00070;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=RJP84821.1;transl_table=11 PTQV01000001.1 Genbank pseudogene 11677 12141 . + . ID=gene-C5O68_00075;Name=C5O68_00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00075;pseudo=true PTQV01000001.1 Protein Homology CDS 11677 12141 . + 0 ID=cds-C5O68_00075;Parent=gene-C5O68_00075;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447012.1;locus_tag=C5O68_00075;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000001.1 Genbank gene 12287 13819 . + . ID=gene-C5O68_00080;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=C5O68_00080 PTQV01000001.1 Protein Homology CDS 12287 13819 . + 0 ID=cds-RJP84822.1;Parent=gene-C5O68_00080;Dbxref=NCBI_GP:RJP84822.1;Name=RJP84822.1;gbkey=CDS;gene=cls;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357774.1;locus_tag=C5O68_00080;product=cardiolipin synthase;protein_id=RJP84822.1;transl_table=11 PTQV01000001.1 Genbank gene 13895 14038 . + . ID=gene-C5O68_00085;Name=C5O68_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00085 PTQV01000001.1 Protein Homology CDS 13895 14038 . + 0 ID=cds-RJP84823.1;Parent=gene-C5O68_00085;Dbxref=NCBI_GP:RJP84823.1;Name=RJP84823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447010.1;locus_tag=C5O68_00085;product=hypothetical protein;protein_id=RJP84823.1;transl_table=11 PTQV01000001.1 Genbank gene 14075 15613 . + . ID=gene-C5O68_00090;Name=C5O68_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00090 PTQV01000001.1 Protein Homology CDS 14075 15613 . + 0 ID=cds-RJP84824.1;Parent=gene-C5O68_00090;Dbxref=NCBI_GP:RJP84824.1;Name=RJP84824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447009.1;locus_tag=C5O68_00090;product=damage-inducible protein CinA;protein_id=RJP84824.1;transl_table=11 PTQV01000001.1 Genbank gene 15727 17940 . + . ID=gene-C5O68_00095;Name=C5O68_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00095 PTQV01000001.1 Protein Homology CDS 15727 17940 . + 0 ID=cds-RJP84825.1;Parent=gene-C5O68_00095;Dbxref=NCBI_GP:RJP84825.1;Name=RJP84825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447008.1;locus_tag=C5O68_00095;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=RJP84825.1;transl_table=11 PTQV01000001.1 Genbank gene 17952 18092 . + . ID=gene-C5O68_00100;Name=C5O68_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00100 PTQV01000001.1 Protein Homology CDS 17952 18092 . + 0 ID=cds-RJP84826.1;Parent=gene-C5O68_00100;Dbxref=NCBI_GP:RJP84826.1;Name=RJP84826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447007.1;locus_tag=C5O68_00100;product=hypothetical protein;protein_id=RJP84826.1;transl_table=11 PTQV01000001.1 Genbank gene 18136 18642 . + . ID=gene-C5O68_00105;Name=C5O68_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00105 PTQV01000001.1 Protein Homology CDS 18136 18642 . + 0 ID=cds-RJP84827.1;Parent=gene-C5O68_00105;Dbxref=NCBI_GP:RJP84827.1;Name=RJP84827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447006.1;locus_tag=C5O68_00105;product=GNAT family N-acetyltransferase;protein_id=RJP84827.1;transl_table=11 PTQV01000001.1 Genbank gene 18635 19225 . + . ID=gene-C5O68_00110;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=C5O68_00110 PTQV01000001.1 Protein Homology CDS 18635 19225 . + 0 ID=cds-RJP84828.1;Parent=gene-C5O68_00110;Dbxref=NCBI_GP:RJP84828.1;Name=RJP84828.1;gbkey=CDS;gene=nrdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357779.1;locus_tag=C5O68_00110;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=RJP84828.1;transl_table=11 PTQV01000001.1 Genbank gene 19222 19839 . + . ID=gene-C5O68_00115;Name=C5O68_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00115 PTQV01000001.1 Protein Homology CDS 19222 19839 . + 0 ID=cds-RJP84829.1;Parent=gene-C5O68_00115;Dbxref=NCBI_GP:RJP84829.1;Name=RJP84829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357780.1;locus_tag=C5O68_00115;product=phosphoribulokinase;protein_id=RJP84829.1;transl_table=11 PTQV01000001.1 Genbank gene 20106 20414 . + . ID=gene-C5O68_00120;Name=C5O68_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00120 PTQV01000001.1 Protein Homology CDS 20106 20414 . + 0 ID=cds-RJP84830.1;Parent=gene-C5O68_00120;Dbxref=NCBI_GP:RJP84830.1;Name=RJP84830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=C5O68_00120;product=30S ribosomal protein S10;protein_id=RJP84830.1;transl_table=11 PTQV01000001.1 Genbank gene 20631 21257 . + . ID=gene-C5O68_00125;Name=C5O68_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00125 PTQV01000001.1 Protein Homology CDS 20631 21257 . + 0 ID=cds-RJP84831.1;Parent=gene-C5O68_00125;Dbxref=NCBI_GP:RJP84831.1;Name=RJP84831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002986659.1;locus_tag=C5O68_00125;product=50S ribosomal protein L3;protein_id=RJP84831.1;transl_table=11 PTQV01000001.1 Genbank gene 21282 21905 . + . ID=gene-C5O68_00130;Name=C5O68_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00130 PTQV01000001.1 Protein Homology CDS 21282 21905 . + 0 ID=cds-RJP84832.1;Parent=gene-C5O68_00130;Dbxref=NCBI_GP:RJP84832.1;Name=RJP84832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677212.1;locus_tag=C5O68_00130;product=50S ribosomal protein L4;protein_id=RJP84832.1;transl_table=11 PTQV01000001.1 Genbank gene 21905 22201 . + . ID=gene-C5O68_00135;Name=C5O68_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00135 PTQV01000001.1 Protein Homology CDS 21905 22201 . + 0 ID=cds-RJP84833.1;Parent=gene-C5O68_00135;Dbxref=NCBI_GP:RJP84833.1;Name=RJP84833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007518994.1;locus_tag=C5O68_00135;product=50S ribosomal protein L23;protein_id=RJP84833.1;transl_table=11 PTQV01000001.1 Genbank gene 22219 23052 . + . ID=gene-C5O68_00140;Name=C5O68_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00140 PTQV01000001.1 Protein Homology CDS 22219 23052 . + 0 ID=cds-RJP84834.1;Parent=gene-C5O68_00140;Dbxref=NCBI_GP:RJP84834.1;Name=RJP84834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019790357.1;locus_tag=C5O68_00140;product=50S ribosomal protein L2;protein_id=RJP84834.1;transl_table=11 PTQV01000001.1 Genbank gene 23156 23437 . + . ID=gene-C5O68_00145;Name=C5O68_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00145 PTQV01000001.1 Protein Homology CDS 23156 23437 . + 0 ID=cds-RJP84835.1;Parent=gene-C5O68_00145;Dbxref=NCBI_GP:RJP84835.1;Name=RJP84835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357786.1;locus_tag=C5O68_00145;product=30S ribosomal protein S19;protein_id=RJP84835.1;transl_table=11 PTQV01000001.1 Genbank gene 23449 23793 . + . ID=gene-C5O68_00150;Name=C5O68_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00150 PTQV01000001.1 Protein Homology CDS 23449 23793 . + 0 ID=cds-RJP84836.1;Parent=gene-C5O68_00150;Dbxref=NCBI_GP:RJP84836.1;Name=RJP84836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=C5O68_00150;product=50S ribosomal protein L22;protein_id=RJP84836.1;transl_table=11 PTQV01000001.1 Genbank gene 23806 24459 . + . ID=gene-C5O68_00155;Name=C5O68_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00155 PTQV01000001.1 Protein Homology CDS 23806 24459 . + 0 ID=cds-RJP84837.1;Parent=gene-C5O68_00155;Dbxref=NCBI_GP:RJP84837.1;Name=RJP84837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529931.1;locus_tag=C5O68_00155;product=30S ribosomal protein S3;protein_id=RJP84837.1;transl_table=11 PTQV01000001.1 Genbank gene 24463 24876 . + . ID=gene-C5O68_00160;Name=C5O68_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00160 PTQV01000001.1 Protein Homology CDS 24463 24876 . + 0 ID=cds-RJP84838.1;Parent=gene-C5O68_00160;Dbxref=NCBI_GP:RJP84838.1;Name=RJP84838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029477.1;locus_tag=C5O68_00160;product=50S ribosomal protein L16;protein_id=RJP84838.1;transl_table=11 PTQV01000001.1 Genbank gene 24886 25092 . + . ID=gene-C5O68_00165;Name=C5O68_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00165 PTQV01000001.1 Protein Homology CDS 24886 25092 . + 0 ID=cds-RJP84839.1;Parent=gene-C5O68_00165;Dbxref=NCBI_GP:RJP84839.1;Name=RJP84839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357791.1;locus_tag=C5O68_00165;product=50S ribosomal protein L29;protein_id=RJP84839.1;transl_table=11 PTQV01000001.1 Genbank gene 25117 25377 . + . ID=gene-C5O68_00170;Name=C5O68_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00170 PTQV01000001.1 Protein Homology CDS 25117 25377 . + 0 ID=cds-RJP84840.1;Parent=gene-C5O68_00170;Dbxref=NCBI_GP:RJP84840.1;Name=RJP84840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738952.1;locus_tag=C5O68_00170;product=30S ribosomal protein S17;protein_id=RJP84840.1;transl_table=11 PTQV01000001.1 Genbank gene 25403 25771 . + . ID=gene-C5O68_00175;Name=C5O68_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00175 PTQV01000001.1 Protein Homology CDS 25403 25771 . + 0 ID=cds-RJP84841.1;Parent=gene-C5O68_00175;Dbxref=NCBI_GP:RJP84841.1;Name=RJP84841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357793.1;locus_tag=C5O68_00175;product=50S ribosomal protein L14;protein_id=RJP84841.1;transl_table=11 PTQV01000001.1 Genbank gene 25954 26259 . + . ID=gene-C5O68_00180;Name=C5O68_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00180 PTQV01000001.1 Protein Homology CDS 25954 26259 . + 0 ID=cds-RJP84842.1;Parent=gene-C5O68_00180;Dbxref=NCBI_GP:RJP84842.1;Name=RJP84842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011921687.1;locus_tag=C5O68_00180;product=50S ribosomal protein L24;protein_id=RJP84842.1;transl_table=11 PTQV01000001.1 Genbank gene 26283 26825 . + . ID=gene-C5O68_00185;Name=C5O68_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00185 PTQV01000001.1 Protein Homology CDS 26283 26825 . + 0 ID=cds-RJP84843.1;Parent=gene-C5O68_00185;Dbxref=NCBI_GP:RJP84843.1;Name=RJP84843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376779.1;locus_tag=C5O68_00185;product=50S ribosomal protein L5;protein_id=RJP84843.1;transl_table=11 PTQV01000001.1 Genbank gene 26843 27112 . + . ID=gene-C5O68_00190;Name=C5O68_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00190 PTQV01000001.1 Protein Homology CDS 26843 27112 . + 0 ID=cds-RJP84844.1;Parent=gene-C5O68_00190;Dbxref=NCBI_GP:RJP84844.1;Name=RJP84844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357796.1;locus_tag=C5O68_00190;product=30S ribosomal protein S14;protein_id=RJP84844.1;transl_table=11 PTQV01000001.1 Genbank gene 27398 27796 . + . ID=gene-C5O68_00195;Name=C5O68_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00195 PTQV01000001.1 Protein Homology CDS 27398 27796 . + 0 ID=cds-RJP84845.1;Parent=gene-C5O68_00195;Dbxref=NCBI_GP:RJP84845.1;Name=RJP84845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009754342.1;locus_tag=C5O68_00195;product=30S ribosomal protein S8;protein_id=RJP84845.1;transl_table=11 PTQV01000001.1 Genbank gene 27984 28520 . + . ID=gene-C5O68_00200;Name=C5O68_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00200 PTQV01000001.1 Protein Homology CDS 27984 28520 . + 0 ID=cds-RJP84846.1;Parent=gene-C5O68_00200;Dbxref=NCBI_GP:RJP84846.1;Name=RJP84846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399261.1;locus_tag=C5O68_00200;product=50S ribosomal protein L6;protein_id=RJP84846.1;transl_table=11 PTQV01000001.1 Genbank gene 28604 28960 . + . ID=gene-C5O68_00205;Name=C5O68_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00205 PTQV01000001.1 Protein Homology CDS 28604 28960 . + 0 ID=cds-RJP84847.1;Parent=gene-C5O68_00205;Dbxref=NCBI_GP:RJP84847.1;Name=RJP84847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357799.1;locus_tag=C5O68_00205;product=50S ribosomal protein L18;protein_id=RJP84847.1;transl_table=11 PTQV01000001.1 Genbank gene 28978 29472 . + . ID=gene-C5O68_00210;Name=C5O68_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00210 PTQV01000001.1 Protein Homology CDS 28978 29472 . + 0 ID=cds-RJP84848.1;Parent=gene-C5O68_00210;Dbxref=NCBI_GP:RJP84848.1;Name=RJP84848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018376782.1;locus_tag=C5O68_00210;product=30S ribosomal protein S5;protein_id=RJP84848.1;transl_table=11 PTQV01000001.1 Genbank gene 29444 29668 . + . ID=gene-C5O68_00215;Name=C5O68_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00215 PTQV01000001.1 Protein Homology CDS 29444 29668 . + 0 ID=cds-RJP84849.1;Parent=gene-C5O68_00215;Dbxref=NCBI_GP:RJP84849.1;Name=RJP84849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386624.1;locus_tag=C5O68_00215;product=50S ribosomal protein L30;protein_id=RJP84849.1;transl_table=11 PTQV01000001.1 Genbank gene 29813 30253 . + . ID=gene-C5O68_00220;Name=C5O68_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00220 PTQV01000001.1 Protein Homology CDS 29813 30253 . + 0 ID=cds-RJP84850.1;Parent=gene-C5O68_00220;Dbxref=NCBI_GP:RJP84850.1;Name=RJP84850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357802.1;locus_tag=C5O68_00220;product=50S ribosomal protein L15;protein_id=RJP84850.1;transl_table=11 PTQV01000001.1 Genbank gene 30266 31576 . + . ID=gene-C5O68_00225;Name=C5O68_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00225 PTQV01000001.1 Protein Homology CDS 30266 31576 . + 0 ID=cds-RJP84851.1;Parent=gene-C5O68_00225;Dbxref=NCBI_GP:RJP84851.1;Name=RJP84851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357803.1;locus_tag=C5O68_00225;product=preprotein translocase subunit SecY;protein_id=RJP84851.1;transl_table=11 PTQV01000001.1 Genbank gene 31586 31675 . + . ID=gene-C5O68_00230;Name=C5O68_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00230 PTQV01000001.1 Protein Homology CDS 31586 31675 . + 0 ID=cds-RJP84877.1;Parent=gene-C5O68_00230;Dbxref=NCBI_GP:RJP84877.1;Name=RJP84877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_00230;product=DNA alkylation repair protein;protein_id=RJP84877.1;transl_table=11 PTQV01000001.1 Genbank gene 31841 32479 . + . ID=gene-C5O68_00235;Name=C5O68_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00235 PTQV01000001.1 Protein Homology CDS 31841 32479 . + 0 ID=cds-RJP84852.1;Parent=gene-C5O68_00235;Dbxref=NCBI_GP:RJP84852.1;Name=RJP84852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357804.1;locus_tag=C5O68_00235;product=adenylate kinase;protein_id=RJP84852.1;transl_table=11 PTQV01000001.1 Genbank gene 32596 32814 . + . ID=gene-C5O68_00240;Name=C5O68_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00240 PTQV01000001.1 Protein Homology CDS 32596 32814 . + 0 ID=cds-RJP84853.1;Parent=gene-C5O68_00240;Dbxref=NCBI_GP:RJP84853.1;Name=RJP84853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001034141.1;locus_tag=C5O68_00240;product=translation initiation factor IF-1;protein_id=RJP84853.1;transl_table=11 PTQV01000001.1 Genbank gene 32839 32955 . + . ID=gene-C5O68_00245;Name=C5O68_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00245 PTQV01000001.1 Protein Homology CDS 32839 32955 . + 0 ID=cds-RJP84854.1;Parent=gene-C5O68_00245;Dbxref=NCBI_GP:RJP84854.1;Name=RJP84854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773089.1;locus_tag=C5O68_00245;product=50S ribosomal protein L36;protein_id=RJP84854.1;transl_table=11 PTQV01000001.1 Genbank gene 32973 33338 . + . ID=gene-C5O68_00250;Name=C5O68_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00250 PTQV01000001.1 Protein Homology CDS 32973 33338 . + 0 ID=cds-RJP84855.1;Parent=gene-C5O68_00250;Dbxref=NCBI_GP:RJP84855.1;Name=RJP84855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008809894.1;locus_tag=C5O68_00250;product=30S ribosomal protein S13;protein_id=RJP84855.1;transl_table=11 PTQV01000001.1 Genbank gene 33356 33739 . + . ID=gene-C5O68_00255;Name=C5O68_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00255 PTQV01000001.1 Protein Homology CDS 33356 33739 . + 0 ID=cds-RJP84856.1;Parent=gene-C5O68_00255;Dbxref=NCBI_GP:RJP84856.1;Name=RJP84856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018374461.1;locus_tag=C5O68_00255;product=30S ribosomal protein S11;protein_id=RJP84856.1;transl_table=11 PTQV01000001.1 Genbank gene 33782 34717 . + . ID=gene-C5O68_00260;Name=C5O68_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00260 PTQV01000001.1 Protein Homology CDS 33782 34717 . + 0 ID=cds-RJP84857.1;Parent=gene-C5O68_00260;Dbxref=NCBI_GP:RJP84857.1;Name=RJP84857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568977.1;locus_tag=C5O68_00260;product=DNA-directed RNA polymerase subunit alpha;protein_id=RJP84857.1;transl_table=11 PTQV01000001.1 Genbank gene 34729 35115 . + . ID=gene-C5O68_00265;Name=C5O68_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00265 PTQV01000001.1 Protein Homology CDS 34729 35115 . + 0 ID=cds-RJP84858.1;Parent=gene-C5O68_00265;Dbxref=NCBI_GP:RJP84858.1;Name=RJP84858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887523.1;locus_tag=C5O68_00265;product=50S ribosomal protein L17;protein_id=RJP84858.1;transl_table=11 PTQV01000001.1 Genbank gene 35380 35646 . + . ID=gene-C5O68_00270;Name=C5O68_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00270 PTQV01000001.1 Protein Homology CDS 35380 35646 . + 0 ID=cds-RJP84859.1;Parent=gene-C5O68_00270;Dbxref=NCBI_GP:RJP84859.1;Name=RJP84859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357811.2;locus_tag=C5O68_00270;product=ACT domain-containing protein;protein_id=RJP84859.1;transl_table=11 PTQV01000001.1 Genbank gene 35656 36993 . + . ID=gene-C5O68_00275;Name=C5O68_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00275 PTQV01000001.1 Protein Homology CDS 35656 36993 . + 0 ID=cds-RJP84860.1;Parent=gene-C5O68_00275;Dbxref=NCBI_GP:RJP84860.1;Name=RJP84860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018166727.1;locus_tag=C5O68_00275;product=hypothetical protein;protein_id=RJP84860.1;transl_table=11 PTQV01000001.1 Genbank gene 37238 37930 . + . ID=gene-C5O68_00280;Name=C5O68_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00280 PTQV01000001.1 Protein Homology CDS 37238 37930 . + 0 ID=cds-RJP84861.1;Parent=gene-C5O68_00280;Dbxref=NCBI_GP:RJP84861.1;Name=RJP84861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399263.1;locus_tag=C5O68_00280;product=histidine phosphatase family protein;protein_id=RJP84861.1;transl_table=11 PTQV01000001.1 Genbank gene 38229 39887 . - . ID=gene-C5O68_00285;Name=C5O68_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00285 PTQV01000001.1 Protein Homology CDS 38229 39887 . - 0 ID=cds-RJP84862.1;Parent=gene-C5O68_00285;Dbxref=NCBI_GP:RJP84862.1;Name=RJP84862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100973.1;locus_tag=C5O68_00285;product=iron ABC transporter permease;protein_id=RJP84862.1;transl_table=11 PTQV01000001.1 Genbank gene 39877 40968 . - . ID=gene-C5O68_00290;Name=C5O68_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00290 PTQV01000001.1 Protein Homology CDS 39877 40968 . - 0 ID=cds-RJP84863.1;Parent=gene-C5O68_00290;Dbxref=NCBI_GP:RJP84863.1;Name=RJP84863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357816.1;locus_tag=C5O68_00290;product=polyamine ABC transporter ATP-binding protein;protein_id=RJP84863.1;transl_table=11 PTQV01000001.1 Genbank pseudogene 40981 42027 . - . ID=gene-C5O68_00295;Name=C5O68_00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00295;pseudo=true PTQV01000001.1 Protein Homology CDS 40981 42027 . - 0 ID=cds-C5O68_00295;Parent=gene-C5O68_00295;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731174.1;locus_tag=C5O68_00295;product=iron ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PTQV01000001.1 Genbank gene 42138 42911 . - . ID=gene-C5O68_00300;Name=C5O68_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00300 PTQV01000001.1 Protein Homology CDS 42138 42911 . - 0 ID=cds-RJP84864.1;Parent=gene-C5O68_00300;Dbxref=NCBI_GP:RJP84864.1;Name=RJP84864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475411.1;locus_tag=C5O68_00300;product=DNA-binding response regulator;protein_id=RJP84864.1;transl_table=11 PTQV01000001.1 Genbank gene 42904 44505 . - . ID=gene-C5O68_00305;Name=C5O68_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00305 PTQV01000001.1 Protein Homology CDS 42904 44505 . - 0 ID=cds-RJP84865.1;Parent=gene-C5O68_00305;Dbxref=NCBI_GP:RJP84865.1;Name=RJP84865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019718.1;locus_tag=C5O68_00305;product=sensor histidine kinase;protein_id=RJP84865.1;transl_table=11 PTQV01000001.1 Genbank gene 44653 47154 . + . ID=gene-C5O68_00310;Name=C5O68_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00310 PTQV01000001.1 Protein Homology CDS 44653 47154 . + 0 ID=cds-RJP84866.1;Parent=gene-C5O68_00310;Dbxref=NCBI_GP:RJP84866.1;Name=RJP84866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357829.1;locus_tag=C5O68_00310;product=leucine--tRNA ligase;protein_id=RJP84866.1;transl_table=11 PTQV01000001.1 Genbank gene 47321 48187 . + . ID=gene-C5O68_00315;Name=C5O68_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00315 PTQV01000001.1 Protein Homology CDS 47321 48187 . + 0 ID=cds-RJP84867.1;Parent=gene-C5O68_00315;Dbxref=NCBI_GP:RJP84867.1;Name=RJP84867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446968.1;locus_tag=C5O68_00315;product=ABC transporter ATP-binding protein;protein_id=RJP84867.1;transl_table=11 PTQV01000001.1 Genbank gene 48187 49029 . + . ID=gene-C5O68_00320;Name=C5O68_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00320 PTQV01000001.1 Protein Homology CDS 48187 49029 . + 0 ID=cds-RJP84868.1;Parent=gene-C5O68_00320;Dbxref=NCBI_GP:RJP84868.1;Name=RJP84868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446967.1;locus_tag=C5O68_00320;product=multidrug ABC transporter permease;protein_id=RJP84868.1;transl_table=11 PTQV01000001.1 Genbank gene 49048 49503 . + . ID=gene-C5O68_00325;Name=C5O68_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00325 PTQV01000001.1 Protein Homology CDS 49048 49503 . + 0 ID=cds-RJP84869.1;Parent=gene-C5O68_00325;Dbxref=NCBI_GP:RJP84869.1;Name=RJP84869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446966.1;locus_tag=C5O68_00325;product=transcriptional regulator;protein_id=RJP84869.1;transl_table=11 PTQV01000001.1 Genbank gene 49513 49932 . + . ID=gene-C5O68_00330;Name=C5O68_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00330 PTQV01000001.1 Protein Homology CDS 49513 49932 . + 0 ID=cds-RJP84870.1;Parent=gene-C5O68_00330;Dbxref=NCBI_GP:RJP84870.1;Name=RJP84870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446965.1;locus_tag=C5O68_00330;product=DUF3021 domain-containing protein;protein_id=RJP84870.1;transl_table=11 PTQV01000001.1 Genbank gene 50027 50722 . + . ID=gene-C5O68_00335;Name=C5O68_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00335 PTQV01000001.1 Protein Homology CDS 50027 50722 . + 0 ID=cds-RJP84871.1;Parent=gene-C5O68_00335;Dbxref=NCBI_GP:RJP84871.1;Name=RJP84871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357830.1;locus_tag=C5O68_00335;product=GNAT family N-acetyltransferase;protein_id=RJP84871.1;transl_table=11 PTQV01000001.1 Genbank gene 50734 51150 . + . ID=gene-C5O68_00340;Name=C5O68_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00340 PTQV01000001.1 Protein Homology CDS 50734 51150 . + 0 ID=cds-RJP84872.1;Parent=gene-C5O68_00340;Dbxref=NCBI_GP:RJP84872.1;Name=RJP84872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357831.1;locus_tag=C5O68_00340;product=GNAT family N-acetyltransferase;protein_id=RJP84872.1;transl_table=11 PTQV01000001.1 Genbank gene 51903 51995 . - . ID=gene-C5O68_00345;Name=C5O68_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00345 PTQV01000001.1 Protein Homology CDS 51903 51995 . - 0 ID=cds-RJP84873.1;Parent=gene-C5O68_00345;Dbxref=NCBI_GP:RJP84873.1;Name=RJP84873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=C5O68_00345;product=type I addiction module toxin%2C Fst family;protein_id=RJP84873.1;transl_table=11 PTQV01000001.1 Genbank gene 52336 52428 . - . ID=gene-C5O68_00350;Name=C5O68_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00350 PTQV01000001.1 Protein Homology CDS 52336 52428 . - 0 ID=cds-RJP84874.1;Parent=gene-C5O68_00350;Dbxref=NCBI_GP:RJP84874.1;Name=RJP84874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446961.1;locus_tag=C5O68_00350;product=type I addiction module toxin%2C Fst family;protein_id=RJP84874.1;transl_table=11 PTQV01000001.1 Genbank gene 53008 53100 . - . ID=gene-C5O68_00355;Name=C5O68_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00355 PTQV01000001.1 Protein Homology CDS 53008 53100 . - 0 ID=cds-RJP84875.1;Parent=gene-C5O68_00355;Dbxref=NCBI_GP:RJP84875.1;Name=RJP84875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=C5O68_00355;product=type I addiction module toxin%2C Fst family;protein_id=RJP84875.1;transl_table=11 PTQV01000001.1 Genbank gene 53443 53535 . - . ID=gene-C5O68_00360;Name=C5O68_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00360 PTQV01000001.1 Protein Homology CDS 53443 53535 . - 0 ID=cds-RJP84876.1;Parent=gene-C5O68_00360;Dbxref=NCBI_GP:RJP84876.1;Name=RJP84876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446960.1;locus_tag=C5O68_00360;product=type I addiction module toxin%2C Fst family;protein_id=RJP84876.1;transl_table=11 ##sequence-region PTQV01000020.1 1 65541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000020.1 Genbank region 1 65541 . + . ID=PTQV01000020.1:1..65541;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000020.1 Genbank gene 296 1306 . - . ID=gene-C5O68_03140;Name=C5O68_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03140 PTQV01000020.1 Protein Homology CDS 296 1306 . - 0 ID=cds-RJP83520.1;Parent=gene-C5O68_03140;Dbxref=NCBI_GP:RJP83520.1;Name=RJP83520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445217.1;locus_tag=C5O68_03140;product=putative sulfate exporter family transporter;protein_id=RJP83520.1;transl_table=11 PTQV01000020.1 Genbank gene 1456 2625 . + . ID=gene-C5O68_03145;Name=C5O68_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03145 PTQV01000020.1 Protein Homology CDS 1456 2625 . + 0 ID=cds-RJP83521.1;Parent=gene-C5O68_03145;Dbxref=NCBI_GP:RJP83521.1;Name=RJP83521.1;Note=catalyzes the transamination of the aromatic amino acid forming a ketoacid%3B first step in aromatic amino acid degradation in lactococci;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357629.1;locus_tag=C5O68_03145;product=pyridoxal phosphate-dependent aminotransferase;protein_id=RJP83521.1;transl_table=11 PTQV01000020.1 Genbank gene 2622 3392 . + . ID=gene-C5O68_03150;Name=C5O68_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03150 PTQV01000020.1 Protein Homology CDS 2622 3392 . + 0 ID=cds-RJP83522.1;Parent=gene-C5O68_03150;Dbxref=NCBI_GP:RJP83522.1;Name=RJP83522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357630.1;locus_tag=C5O68_03150;product=DNA repair protein RecO;protein_id=RJP83522.1;transl_table=11 PTQV01000020.1 Genbank gene 3389 4381 . + . ID=gene-C5O68_03155;Name=C5O68_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03155 PTQV01000020.1 Protein Homology CDS 3389 4381 . + 0 ID=cds-RJP83523.1;Parent=gene-C5O68_03155;Dbxref=NCBI_GP:RJP83523.1;Name=RJP83523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357631.1;locus_tag=C5O68_03155;product=phosphate acyltransferase PlsX;protein_id=RJP83523.1;transl_table=11 PTQV01000020.1 Genbank gene 4387 4620 . + . ID=gene-C5O68_03160;Name=C5O68_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03160 PTQV01000020.1 Protein Homology CDS 4387 4620 . + 0 ID=cds-RJP83524.1;Parent=gene-C5O68_03160;Dbxref=NCBI_GP:RJP83524.1;Name=RJP83524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445221.1;locus_tag=C5O68_03160;product=acyl carrier protein;protein_id=RJP83524.1;transl_table=11 PTQV01000020.1 Genbank gene 4789 5643 . + . ID=gene-C5O68_03165;Name=C5O68_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03165 PTQV01000020.1 Protein Homology CDS 4789 5643 . + 0 ID=cds-RJP83584.1;Parent=gene-C5O68_03165;Dbxref=NCBI_GP:RJP83584.1;Name=RJP83584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976808.1;locus_tag=C5O68_03165;product=hypothetical protein;protein_id=RJP83584.1;transl_table=11 PTQV01000020.1 Genbank gene 5756 6925 . + . ID=gene-C5O68_03170;Name=C5O68_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03170 PTQV01000020.1 Protein Homology CDS 5756 6925 . + 0 ID=cds-RJP83525.1;Parent=gene-C5O68_03170;Dbxref=NCBI_GP:RJP83525.1;Name=RJP83525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445224.1;locus_tag=C5O68_03170;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=RJP83525.1;transl_table=11 PTQV01000020.1 Genbank gene 7078 7224 . + . ID=gene-C5O68_03175;Name=C5O68_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03175 PTQV01000020.1 Protein Homology CDS 7078 7224 . + 0 ID=cds-RJP83526.1;Parent=gene-C5O68_03175;Dbxref=NCBI_GP:RJP83526.1;Name=RJP83526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445225.1;locus_tag=C5O68_03175;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=RJP83526.1;transl_table=11 PTQV01000020.1 Genbank gene 7258 8604 . + . ID=gene-C5O68_03180;Name=C5O68_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03180 PTQV01000020.1 Protein Homology CDS 7258 8604 . + 0 ID=cds-RJP83527.1;Parent=gene-C5O68_03180;Dbxref=NCBI_GP:RJP83527.1;Name=RJP83527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445226.1;locus_tag=C5O68_03180;product=GHKL domain-containing protein;protein_id=RJP83527.1;transl_table=11 PTQV01000020.1 Genbank gene 8601 9332 . + . ID=gene-C5O68_03185;Name=C5O68_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03185 PTQV01000020.1 Protein Homology CDS 8601 9332 . + 0 ID=cds-RJP83528.1;Parent=gene-C5O68_03185;Dbxref=NCBI_GP:RJP83528.1;Name=RJP83528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445227.1;locus_tag=C5O68_03185;product=DNA-binding response regulator;protein_id=RJP83528.1;transl_table=11 PTQV01000020.1 Genbank gene 9702 9830 . + . ID=gene-C5O68_03190;Name=C5O68_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03190 PTQV01000020.1 Protein Homology CDS 9702 9830 . + 0 ID=cds-RJP83529.1;Parent=gene-C5O68_03190;Dbxref=NCBI_GP:RJP83529.1;Name=RJP83529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=C5O68_03190;product=ethanolamine utilization protein EutH;protein_id=RJP83529.1;transl_table=11 PTQV01000020.1 Genbank gene 9851 9982 . + . ID=gene-C5O68_03195;Name=C5O68_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03195 PTQV01000020.1 Protein Homology CDS 9851 9982 . + 0 ID=cds-RJP83585.1;Parent=gene-C5O68_03195;Dbxref=NCBI_GP:RJP83585.1;Name=RJP83585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=C5O68_03195;product=hypothetical protein;protein_id=RJP83585.1;transl_table=11 PTQV01000020.1 Genbank gene 10093 10275 . + . ID=gene-C5O68_03200;Name=C5O68_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03200 PTQV01000020.1 Protein Homology CDS 10093 10275 . + 0 ID=cds-RJP83530.1;Parent=gene-C5O68_03200;Dbxref=NCBI_GP:RJP83530.1;Name=RJP83530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435077.1;locus_tag=C5O68_03200;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=RJP83530.1;transl_table=11 PTQV01000020.1 Genbank gene 10295 10486 . + . ID=gene-C5O68_03205;Name=C5O68_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03205 PTQV01000020.1 Protein Homology CDS 10295 10486 . + 0 ID=cds-RJP83531.1;Parent=gene-C5O68_03205;Dbxref=NCBI_GP:RJP83531.1;Name=RJP83531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439599.1;locus_tag=C5O68_03205;product=hypothetical protein;protein_id=RJP83531.1;transl_table=11 PTQV01000020.1 Genbank gene 10516 10716 . + . ID=gene-C5O68_03210;Name=C5O68_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03210 PTQV01000020.1 Protein Homology CDS 10516 10716 . + 0 ID=cds-RJP83532.1;Parent=gene-C5O68_03210;Dbxref=NCBI_GP:RJP83532.1;Name=RJP83532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055966.1;locus_tag=C5O68_03210;product=bacteriocin;protein_id=RJP83532.1;transl_table=11 PTQV01000020.1 Genbank gene 10909 11151 . + . ID=gene-C5O68_03215;Name=C5O68_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03215 PTQV01000020.1 Protein Homology CDS 10909 11151 . + 0 ID=cds-RJP83533.1;Parent=gene-C5O68_03215;Dbxref=NCBI_GP:RJP83533.1;Name=RJP83533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357634.1;locus_tag=C5O68_03215;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=RJP83533.1;transl_table=11 PTQV01000020.1 Genbank gene 11873 12460 . + . ID=gene-C5O68_03220;Name=C5O68_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03220 PTQV01000020.1 Protein Homology CDS 11873 12460 . + 0 ID=cds-RJP83534.1;Parent=gene-C5O68_03220;Dbxref=NCBI_GP:RJP83534.1;Name=RJP83534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446388.1;locus_tag=C5O68_03220;product=recombinase family protein;protein_id=RJP83534.1;transl_table=11 PTQV01000020.1 Genbank gene 12659 13894 . + . ID=gene-C5O68_03225;Name=C5O68_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03225 PTQV01000020.1 Protein Homology CDS 12659 13894 . + 0 ID=cds-RJP83535.1;Parent=gene-C5O68_03225;Dbxref=NCBI_GP:RJP83535.1;Name=RJP83535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399520.1;locus_tag=C5O68_03225;product=choline-binding protein C;protein_id=RJP83535.1;transl_table=11 PTQV01000020.1 Genbank gene 13941 15341 . + . ID=gene-C5O68_03230;Name=C5O68_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03230 PTQV01000020.1 Protein Homology CDS 13941 15341 . + 0 ID=cds-RJP83536.1;Parent=gene-C5O68_03230;Dbxref=NCBI_GP:RJP83536.1;Name=RJP83536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725077.1;locus_tag=C5O68_03230;product=choline-binding protein J;protein_id=RJP83536.1;transl_table=11 PTQV01000020.1 Genbank gene 15371 16417 . + . ID=gene-C5O68_03235;Name=C5O68_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03235 PTQV01000020.1 Protein Homology CDS 15371 16417 . + 0 ID=cds-RJP83537.1;Parent=gene-C5O68_03235;Dbxref=NCBI_GP:RJP83537.1;Name=RJP83537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446391.1;locus_tag=C5O68_03235;product=hypothetical protein;protein_id=RJP83537.1;transl_table=11 PTQV01000020.1 Genbank gene 16909 17037 . + . ID=gene-C5O68_03240;Name=C5O68_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03240 PTQV01000020.1 Protein Homology CDS 16909 17037 . + 0 ID=cds-RJP83538.1;Parent=gene-C5O68_03240;Dbxref=NCBI_GP:RJP83538.1;Name=RJP83538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445228.1;locus_tag=C5O68_03240;product=ethanolamine utilization protein EutH;protein_id=RJP83538.1;transl_table=11 PTQV01000020.1 Genbank gene 17058 17204 . + . ID=gene-C5O68_03245;Name=C5O68_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03245 PTQV01000020.1 Protein Homology CDS 17058 17204 . + 0 ID=cds-RJP83586.1;Parent=gene-C5O68_03245;Dbxref=NCBI_GP:RJP83586.1;Name=RJP83586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445229.1;locus_tag=C5O68_03245;product=hypothetical protein;protein_id=RJP83586.1;transl_table=11 PTQV01000020.1 Genbank gene 17239 17433 . + . ID=gene-C5O68_03250;Name=C5O68_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03250 PTQV01000020.1 Protein Homology CDS 17239 17433 . + 0 ID=cds-RJP83539.1;Parent=gene-C5O68_03250;Dbxref=NCBI_GP:RJP83539.1;Name=RJP83539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000180816.1;locus_tag=C5O68_03250;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=RJP83539.1;transl_table=11 PTQV01000020.1 Genbank gene 17461 17661 . + . ID=gene-C5O68_03255;Name=C5O68_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03255 PTQV01000020.1 Protein Homology CDS 17461 17661 . + 0 ID=cds-RJP83540.1;Parent=gene-C5O68_03255;Dbxref=NCBI_GP:RJP83540.1;Name=RJP83540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478863.1;locus_tag=C5O68_03255;product=hypothetical protein;protein_id=RJP83540.1;transl_table=11 PTQV01000020.1 Genbank gene 17670 17837 . + . ID=gene-C5O68_03260;Name=C5O68_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03260 PTQV01000020.1 Protein Homology CDS 17670 17837 . + 0 ID=cds-RJP83541.1;Parent=gene-C5O68_03260;Dbxref=NCBI_GP:RJP83541.1;Name=RJP83541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371542.1;locus_tag=C5O68_03260;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=RJP83541.1;transl_table=11 PTQV01000020.1 Genbank gene 17841 18056 . + . ID=gene-C5O68_03265;Name=C5O68_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03265 PTQV01000020.1 Protein Homology CDS 17841 18056 . + 0 ID=cds-RJP83542.1;Parent=gene-C5O68_03265;Dbxref=NCBI_GP:RJP83542.1;Name=RJP83542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445233.1;locus_tag=C5O68_03265;product=bacteriocin immunity protein;protein_id=RJP83542.1;transl_table=11 PTQV01000020.1 Genbank gene 18137 18316 . + . ID=gene-C5O68_03270;Name=C5O68_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03270 PTQV01000020.1 Protein Homology CDS 18137 18316 . + 0 ID=cds-RJP83543.1;Parent=gene-C5O68_03270;Dbxref=NCBI_GP:RJP83543.1;Name=RJP83543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846993.1;locus_tag=C5O68_03270;product=hypothetical protein;protein_id=RJP83543.1;transl_table=11 PTQV01000020.1 Genbank gene 18395 18601 . + . ID=gene-C5O68_03275;Name=C5O68_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03275 PTQV01000020.1 Protein Homology CDS 18395 18601 . + 0 ID=cds-RJP83544.1;Parent=gene-C5O68_03275;Dbxref=NCBI_GP:RJP83544.1;Name=RJP83544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445234.1;locus_tag=C5O68_03275;product=bacteriocin immunity protein;protein_id=RJP83544.1;transl_table=11 PTQV01000020.1 Genbank gene 19022 19210 . + . ID=gene-C5O68_03280;Name=C5O68_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03280 PTQV01000020.1 Protein Homology CDS 19022 19210 . + 0 ID=cds-RJP83545.1;Parent=gene-C5O68_03280;Dbxref=NCBI_GP:RJP83545.1;Name=RJP83545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757183.1;locus_tag=C5O68_03280;product=hypothetical protein;protein_id=RJP83545.1;transl_table=11 PTQV01000020.1 Genbank pseudogene 19465 19539 . - . ID=gene-C5O68_03285;Name=C5O68_03285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03285;pseudo=true PTQV01000020.1 Protein Homology CDS 19465 19539 . - 0 ID=cds-C5O68_03285;Parent=gene-C5O68_03285;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_03285;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000020.1 Genbank gene 19566 21719 . + . ID=gene-C5O68_03290;Name=C5O68_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03290 PTQV01000020.1 Protein Homology CDS 19566 21719 . + 0 ID=cds-RJP83546.1;Parent=gene-C5O68_03290;Dbxref=NCBI_GP:RJP83546.1;Name=RJP83546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445235.1;locus_tag=C5O68_03290;product=peptide ABC transporter ATP-binding protein;protein_id=RJP83546.1;transl_table=11 PTQV01000020.1 Genbank gene 21732 23081 . + . ID=gene-C5O68_03295;Name=C5O68_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03295 PTQV01000020.1 Protein Homology CDS 21732 23081 . + 0 ID=cds-RJP83547.1;Parent=gene-C5O68_03295;Dbxref=NCBI_GP:RJP83547.1;Name=RJP83547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445236.1;locus_tag=C5O68_03295;product=competence protein ComB;protein_id=RJP83547.1;transl_table=11 PTQV01000020.1 Genbank gene 23315 24064 . + . ID=gene-C5O68_03300;Name=C5O68_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03300 PTQV01000020.1 Protein Homology CDS 23315 24064 . + 0 ID=cds-RJP83548.1;Parent=gene-C5O68_03300;Dbxref=NCBI_GP:RJP83548.1;Name=RJP83548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357639.1;locus_tag=C5O68_03300;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=RJP83548.1;transl_table=11 PTQV01000020.1 Genbank gene 24066 24209 . + . ID=gene-C5O68_03305;Name=C5O68_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03305 PTQV01000020.1 Protein Homology CDS 24066 24209 . + 0 ID=cds-RJP83587.1;Parent=gene-C5O68_03305;Dbxref=NCBI_GP:RJP83587.1;Name=RJP83587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429437.1;locus_tag=C5O68_03305;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=RJP83587.1;transl_table=11 PTQV01000020.1 Genbank gene 24266 27991 . + . ID=gene-C5O68_03310;Name=C5O68_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03310 PTQV01000020.1 Protein Homology CDS 24266 27991 . + 0 ID=cds-RJP83549.1;Parent=gene-C5O68_03310;Dbxref=NCBI_GP:RJP83549.1;Name=RJP83549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445238.1;locus_tag=C5O68_03310;product=phosphoribosylformylglycinamidine synthase;protein_id=RJP83549.1;transl_table=11 PTQV01000020.1 Genbank gene 28085 29527 . + . ID=gene-C5O68_03315;Name=C5O68_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03315 PTQV01000020.1 Protein Homology CDS 28085 29527 . + 0 ID=cds-RJP83550.1;Parent=gene-C5O68_03315;Dbxref=NCBI_GP:RJP83550.1;Name=RJP83550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445239.1;locus_tag=C5O68_03315;product=amidophosphoribosyltransferase;protein_id=RJP83550.1;transl_table=11 PTQV01000020.1 Genbank gene 29745 30767 . + . ID=gene-C5O68_03320;Name=C5O68_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03320 PTQV01000020.1 Protein Homology CDS 29745 30767 . + 0 ID=cds-RJP83551.1;Parent=gene-C5O68_03320;Dbxref=NCBI_GP:RJP83551.1;Name=RJP83551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357642.1;locus_tag=C5O68_03320;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=RJP83551.1;transl_table=11 PTQV01000020.1 Genbank gene 30764 31318 . + . ID=gene-C5O68_03325;Name=C5O68_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03325 PTQV01000020.1 Protein Homology CDS 30764 31318 . + 0 ID=cds-RJP83552.1;Parent=gene-C5O68_03325;Dbxref=NCBI_GP:RJP83552.1;Name=RJP83552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717485.1;locus_tag=C5O68_03325;product=phosphoribosylglycinamide formyltransferase;protein_id=RJP83552.1;transl_table=11 PTQV01000020.1 Genbank gene 31315 31689 . + . ID=gene-C5O68_03330;Name=C5O68_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03330 PTQV01000020.1 Protein Homology CDS 31315 31689 . + 0 ID=cds-RJP83553.1;Parent=gene-C5O68_03330;Dbxref=NCBI_GP:RJP83553.1;Name=RJP83553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218874.1;locus_tag=C5O68_03330;product=hypothetical protein;protein_id=RJP83553.1;transl_table=11 PTQV01000020.1 Genbank gene 31733 32197 . + . ID=gene-C5O68_03335;Name=C5O68_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03335 PTQV01000020.1 Protein Homology CDS 31733 32197 . + 0 ID=cds-RJP83554.1;Parent=gene-C5O68_03335;Dbxref=NCBI_GP:RJP83554.1;Name=RJP83554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445242.1;locus_tag=C5O68_03335;product=N-acetyltransferase;protein_id=RJP83554.1;transl_table=11 PTQV01000020.1 Genbank gene 32199 33746 . + . ID=gene-C5O68_03340;Name=C5O68_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03340 PTQV01000020.1 Protein Homology CDS 32199 33746 . + 0 ID=cds-RJP83555.1;Parent=gene-C5O68_03340;Dbxref=NCBI_GP:RJP83555.1;Name=RJP83555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006146083.1;locus_tag=C5O68_03340;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=RJP83555.1;transl_table=11 PTQV01000020.1 Genbank gene 33868 35130 . + . ID=gene-C5O68_03345;Name=C5O68_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03345 PTQV01000020.1 Protein Homology CDS 33868 35130 . + 0 ID=cds-RJP83556.1;Parent=gene-C5O68_03345;Dbxref=NCBI_GP:RJP83556.1;Name=RJP83556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445244.1;locus_tag=C5O68_03345;product=phosphoribosylamine--glycine ligase;protein_id=RJP83556.1;transl_table=11 PTQV01000020.1 Genbank gene 35039 35329 . + . ID=gene-C5O68_03350;Name=C5O68_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03350 PTQV01000020.1 Protein Homology CDS 35039 35329 . + 0 ID=cds-RJP83557.1;Parent=gene-C5O68_03350;Dbxref=NCBI_GP:RJP83557.1;Name=RJP83557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000498909.1;locus_tag=C5O68_03350;product=hypothetical protein;protein_id=RJP83557.1;transl_table=11 PTQV01000020.1 Genbank gene 35322 35813 . + . ID=gene-C5O68_03355;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=C5O68_03355 PTQV01000020.1 Protein Homology CDS 35322 35813 . + 0 ID=cds-RJP83558.1;Parent=gene-C5O68_03355;Dbxref=NCBI_GP:RJP83558.1;Name=RJP83558.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445245.1;locus_tag=C5O68_03355;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=RJP83558.1;transl_table=11 PTQV01000020.1 Genbank gene 35800 36891 . + . ID=gene-C5O68_03360;Name=C5O68_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03360 PTQV01000020.1 Protein Homology CDS 35800 36891 . + 0 ID=cds-RJP83559.1;Parent=gene-C5O68_03360;Dbxref=NCBI_GP:RJP83559.1;Name=RJP83559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099033.1;locus_tag=C5O68_03360;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=RJP83559.1;transl_table=11 PTQV01000020.1 Genbank gene 36901 37128 . + . ID=gene-C5O68_03365;Name=C5O68_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03365 PTQV01000020.1 Protein Homology CDS 36901 37128 . + 0 ID=cds-RJP83560.1;Parent=gene-C5O68_03365;Dbxref=NCBI_GP:RJP83560.1;Name=RJP83560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357649.1;locus_tag=C5O68_03365;product=phosphoribosylaminoimidazole carboxylase;protein_id=RJP83560.1;transl_table=11 PTQV01000020.1 Genbank gene 37191 38489 . + . ID=gene-C5O68_03370;Name=C5O68_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03370 PTQV01000020.1 Protein Homology CDS 37191 38489 . + 0 ID=cds-RJP83561.1;Parent=gene-C5O68_03370;Dbxref=NCBI_GP:RJP83561.1;Name=RJP83561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357650.1;locus_tag=C5O68_03370;product=adenylosuccinate lyase;protein_id=RJP83561.1;transl_table=11 PTQV01000020.1 Genbank gene 38544 42482 . - . ID=gene-C5O68_03375;Name=C5O68_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03375 PTQV01000020.1 Protein Homology CDS 38544 42482 . - 0 ID=cds-RJP83562.1;Parent=gene-C5O68_03375;Dbxref=NCBI_GP:RJP83562.1;Name=RJP83562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357651.1;locus_tag=C5O68_03375;product=beta-N-acetylhexosaminidase;protein_id=RJP83562.1;transl_table=11 PTQV01000020.1 Genbank gene 42797 43555 . - . ID=gene-C5O68_03380;Name=C5O68_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03380 PTQV01000020.1 Protein Homology CDS 42797 43555 . - 0 ID=cds-RJP83563.1;Parent=gene-C5O68_03380;Dbxref=NCBI_GP:RJP83563.1;Name=RJP83563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357652.1;locus_tag=C5O68_03380;product=GntR family transcriptional regulator;protein_id=RJP83563.1;transl_table=11 PTQV01000020.1 Genbank gene 43868 45655 . + . ID=gene-C5O68_03385;Name=C5O68_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03385 PTQV01000020.1 Protein Homology CDS 43868 45655 . + 0 ID=cds-RJP83564.1;Parent=gene-C5O68_03385;Dbxref=NCBI_GP:RJP83564.1;Name=RJP83564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357653.1;locus_tag=C5O68_03385;product=beta-galactosidase;protein_id=RJP83564.1;transl_table=11 PTQV01000020.1 Genbank gene 45652 46128 . + . ID=gene-C5O68_03390;Name=C5O68_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03390 PTQV01000020.1 Protein Homology CDS 45652 46128 . + 0 ID=cds-RJP83565.1;Parent=gene-C5O68_03390;Dbxref=NCBI_GP:RJP83565.1;Name=RJP83565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357654.1;locus_tag=C5O68_03390;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=RJP83565.1;transl_table=11 PTQV01000020.1 Genbank gene 46156 47061 . + . ID=gene-C5O68_03395;Name=C5O68_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03395 PTQV01000020.1 Protein Homology CDS 46156 47061 . + 0 ID=cds-RJP83566.1;Parent=gene-C5O68_03395;Dbxref=NCBI_GP:RJP83566.1;Name=RJP83566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357655.1;locus_tag=C5O68_03395;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=RJP83566.1;transl_table=11 PTQV01000020.1 Genbank gene 47048 47863 . + . ID=gene-C5O68_03400;Name=C5O68_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03400 PTQV01000020.1 Protein Homology CDS 47048 47863 . + 0 ID=cds-RJP83567.1;Parent=gene-C5O68_03400;Dbxref=NCBI_GP:RJP83567.1;Name=RJP83567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445253.1;locus_tag=C5O68_03400;product=PTS fructose transporter subunit IID;protein_id=RJP83567.1;transl_table=11 PTQV01000020.1 Genbank gene 47870 48274 . + . ID=gene-C5O68_03405;Name=C5O68_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03405 PTQV01000020.1 Protein Homology CDS 47870 48274 . + 0 ID=cds-RJP83568.1;Parent=gene-C5O68_03405;Dbxref=NCBI_GP:RJP83568.1;Name=RJP83568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445254.1;locus_tag=C5O68_03405;product=PTS fructose transporter subunit IIA;protein_id=RJP83568.1;transl_table=11 PTQV01000020.1 Genbank gene 48374 49540 . + . ID=gene-C5O68_03410;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=C5O68_03410 PTQV01000020.1 Protein Homology CDS 48374 49540 . + 0 ID=cds-RJP83569.1;Parent=gene-C5O68_03410;Dbxref=NCBI_GP:RJP83569.1;Name=RJP83569.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357658.1;locus_tag=C5O68_03410;product=tagatose-6-phosphate ketose isomerase;protein_id=RJP83569.1;transl_table=11 PTQV01000020.1 Genbank gene 49656 50693 . + . ID=gene-C5O68_03415;Name=C5O68_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03415 PTQV01000020.1 Protein Homology CDS 49656 50693 . + 0 ID=cds-RJP83570.1;Parent=gene-C5O68_03415;Dbxref=NCBI_GP:RJP83570.1;Name=RJP83570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357659.1;locus_tag=C5O68_03415;product=galactose mutarotase;protein_id=RJP83570.1;transl_table=11 PTQV01000020.1 Genbank pseudogene 50894 51747 . + . ID=gene-C5O68_03420;Name=C5O68_03420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03420;pseudo=true PTQV01000020.1 Protein Homology CDS 50894 51747 . + 0 ID=cds-C5O68_03420;Parent=gene-C5O68_03420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357660.1;locus_tag=C5O68_03420;product=glyoxalase;pseudo=true;transl_table=11 PTQV01000020.1 Genbank gene 51888 52652 . + . ID=gene-C5O68_03425;Name=C5O68_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03425 PTQV01000020.1 Protein Homology CDS 51888 52652 . + 0 ID=cds-RJP83571.1;Parent=gene-C5O68_03425;Dbxref=NCBI_GP:RJP83571.1;Name=RJP83571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357662.1;locus_tag=C5O68_03425;product=phosphorylase;protein_id=RJP83571.1;transl_table=11 PTQV01000020.1 Genbank gene 52866 54245 . + . ID=gene-C5O68_03430;Name=C5O68_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03430 PTQV01000020.1 Protein Homology CDS 52866 54245 . + 0 ID=cds-RJP83572.1;Parent=gene-C5O68_03430;Dbxref=NCBI_GP:RJP83572.1;Name=RJP83572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357664.1;locus_tag=C5O68_03430;product=potassium transporter Trk;protein_id=RJP83572.1;transl_table=11 PTQV01000020.1 Genbank gene 54259 54924 . + . ID=gene-C5O68_03435;Name=C5O68_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03435 PTQV01000020.1 Protein Homology CDS 54259 54924 . + 0 ID=cds-RJP83573.1;Parent=gene-C5O68_03435;Dbxref=NCBI_GP:RJP83573.1;Name=RJP83573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283900.1;locus_tag=C5O68_03435;product=TrkA family potassium uptake protein;protein_id=RJP83573.1;transl_table=11 PTQV01000020.1 Genbank gene 55001 55180 . - . ID=gene-C5O68_03440;Name=C5O68_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03440 PTQV01000020.1 Protein Homology CDS 55001 55180 . - 0 ID=cds-RJP83574.1;Parent=gene-C5O68_03440;Dbxref=NCBI_GP:RJP83574.1;Name=RJP83574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=C5O68_03440;product=hypothetical protein;protein_id=RJP83574.1;transl_table=11 PTQV01000020.1 Genbank pseudogene 55167 55235 . - . ID=gene-C5O68_03445;Name=C5O68_03445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03445;pseudo=true PTQV01000020.1 Protein Homology CDS 55167 55235 . - 0 ID=cds-C5O68_03445;Parent=gene-C5O68_03445;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_03445;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000020.1 Genbank gene 55280 56296 . + . ID=gene-C5O68_03450;Name=C5O68_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03450 PTQV01000020.1 Protein Homology CDS 55280 56296 . + 0 ID=cds-RJP83575.1;Parent=gene-C5O68_03450;Dbxref=NCBI_GP:RJP83575.1;Name=RJP83575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445261.1;locus_tag=C5O68_03450;product=glycosyltransferase family 2 protein;protein_id=RJP83575.1;transl_table=11 PTQV01000020.1 Genbank gene 56412 58214 . + . ID=gene-C5O68_03455;Name=C5O68_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03455 PTQV01000020.1 Protein Homology CDS 56412 58214 . + 0 ID=cds-RJP83576.1;Parent=gene-C5O68_03455;Dbxref=NCBI_GP:RJP83576.1;Name=RJP83576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445262.1;locus_tag=C5O68_03455;product=YSIRK signal domain/LPXTG anchor domain surface protein;protein_id=RJP83576.1;transl_table=11 PTQV01000020.1 Genbank gene 58381 59079 . + . ID=gene-C5O68_03460;Name=C5O68_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03460 PTQV01000020.1 Protein Homology CDS 58381 59079 . + 0 ID=cds-RJP83577.1;Parent=gene-C5O68_03460;Dbxref=NCBI_GP:RJP83577.1;Name=RJP83577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445263.1;locus_tag=C5O68_03460;product=DNA-binding response regulator;protein_id=RJP83577.1;transl_table=11 PTQV01000020.1 Genbank gene 59076 60128 . + . ID=gene-C5O68_03465;Name=C5O68_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03465 PTQV01000020.1 Protein Homology CDS 59076 60128 . + 0 ID=cds-RJP83578.1;Parent=gene-C5O68_03465;Dbxref=NCBI_GP:RJP83578.1;Name=RJP83578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445264.1;locus_tag=C5O68_03465;product=sensor histidine kinase;protein_id=RJP83578.1;transl_table=11 PTQV01000020.1 Genbank gene 60323 60934 . + . ID=gene-C5O68_03470;Name=C5O68_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03470 PTQV01000020.1 Protein Homology CDS 60323 60934 . + 0 ID=cds-RJP83579.1;Parent=gene-C5O68_03470;Dbxref=NCBI_GP:RJP83579.1;Name=RJP83579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407971.1;locus_tag=C5O68_03470;product=30S ribosomal protein S4;protein_id=RJP83579.1;transl_table=11 PTQV01000020.1 Genbank gene 61097 61384 . + . ID=gene-C5O68_03475;Name=C5O68_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03475 PTQV01000020.1 Protein Homology CDS 61097 61384 . + 0 ID=cds-RJP83580.1;Parent=gene-C5O68_03475;Dbxref=NCBI_GP:RJP83580.1;Name=RJP83580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445269.1;locus_tag=C5O68_03475;product=hypothetical protein;protein_id=RJP83580.1;transl_table=11 PTQV01000020.1 Genbank gene 61374 61721 . + . ID=gene-C5O68_03480;Name=C5O68_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03480 PTQV01000020.1 Protein Homology CDS 61374 61721 . + 0 ID=cds-RJP83581.1;Parent=gene-C5O68_03480;Dbxref=NCBI_GP:RJP83581.1;Name=RJP83581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445270.1;locus_tag=C5O68_03480;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=RJP83581.1;transl_table=11 PTQV01000020.1 Genbank gene 62363 63169 . + . ID=gene-C5O68_03485;Name=C5O68_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03485 PTQV01000020.1 Protein Homology CDS 62363 63169 . + 0 ID=cds-RJP83582.1;Parent=gene-C5O68_03485;Dbxref=NCBI_GP:RJP83582.1;Name=RJP83582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445271.1;locus_tag=C5O68_03485;product=hypothetical protein;protein_id=RJP83582.1;transl_table=11 PTQV01000020.1 Genbank gene 63191 64438 . + . ID=gene-C5O68_03490;Name=C5O68_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03490 PTQV01000020.1 Protein Homology CDS 63191 64438 . + 0 ID=cds-RJP83583.1;Parent=gene-C5O68_03490;Dbxref=NCBI_GP:RJP83583.1;Name=RJP83583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445272.1;locus_tag=C5O68_03490;product=toxic anion resistance protein;protein_id=RJP83583.1;transl_table=11 PTQV01000020.1 Genbank gene 64554 65541 . - . ID=gene-C5O68_03495;Name=C5O68_03495;end_range=65541,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03495;partial=true PTQV01000020.1 Protein Homology CDS 64554 65541 . - 1 ID=cds-RJP83588.1;Parent=gene-C5O68_03495;Dbxref=NCBI_GP:RJP83588.1;Name=RJP83588.1;end_range=65541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000926699.1;locus_tag=C5O68_03495;partial=true;product=FRG domain-containing protein;protein_id=RJP83588.1;transl_table=11 ##sequence-region PTQV01000021.1 1 24940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000021.1 Genbank region 1 24940 . + . ID=PTQV01000021.1:1..24940;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000021.1 Genbank gene 214 1914 . - . ID=gene-C5O68_03500;Name=C5O68_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03500 PTQV01000021.1 Protein Homology CDS 214 1914 . - 0 ID=cds-RJP83454.1;Parent=gene-C5O68_03500;Dbxref=NCBI_GP:RJP83454.1;Name=RJP83454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07554.11%2CHMM:TIGR01167;locus_tag=C5O68_03500;product=hypothetical protein;protein_id=RJP83454.1;transl_table=11 PTQV01000021.1 Genbank pseudogene 2148 2595 . + . ID=gene-C5O68_03505;Name=C5O68_03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03505;pseudo=true PTQV01000021.1 Protein Homology CDS 2148 2595 . + 0 ID=cds-C5O68_03505;Parent=gene-C5O68_03505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677226.1;locus_tag=C5O68_03505;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000021.1 Genbank pseudogene 2611 2793 . + . ID=gene-C5O68_03510;Name=C5O68_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03510;pseudo=true PTQV01000021.1 Protein Homology CDS 2611 2793 . + 0 ID=cds-C5O68_03510;Parent=gene-C5O68_03510;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284773.1;locus_tag=C5O68_03510;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000021.1 Genbank gene 3064 3681 . - . ID=gene-C5O68_03515;Name=C5O68_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03515 PTQV01000021.1 Protein Homology CDS 3064 3681 . - 0 ID=cds-RJP83455.1;Parent=gene-C5O68_03515;Dbxref=NCBI_GP:RJP83455.1;Name=RJP83455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046307.1;locus_tag=C5O68_03515;product=potassium-transporting ATPase subunit C;protein_id=RJP83455.1;transl_table=11 PTQV01000021.1 Genbank gene 3805 5874 . - . ID=gene-C5O68_03520;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=C5O68_03520 PTQV01000021.1 Protein Homology CDS 3805 5874 . - 0 ID=cds-RJP83456.1;Parent=gene-C5O68_03520;Dbxref=NCBI_GP:RJP83456.1;Name=RJP83456.1;gbkey=CDS;gene=kdpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893144.1;locus_tag=C5O68_03520;product=K(+)-transporting ATPase subunit B;protein_id=RJP83456.1;transl_table=11 PTQV01000021.1 Genbank gene 5883 7628 . - . ID=gene-C5O68_03525;Name=C5O68_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03525 PTQV01000021.1 Protein Homology CDS 5883 7628 . - 0 ID=cds-RJP83457.1;Parent=gene-C5O68_03525;Dbxref=NCBI_GP:RJP83457.1;Name=RJP83457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007893148.1;locus_tag=C5O68_03525;product=potassium-transporting ATPase subunit KdpA;protein_id=RJP83457.1;transl_table=11 PTQV01000021.1 Genbank gene 7641 7718 . - . ID=gene-C5O68_03530;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=C5O68_03530 PTQV01000021.1 Protein Homology CDS 7641 7718 . - 0 ID=cds-RJP83469.1;Parent=gene-C5O68_03530;Dbxref=NCBI_GP:RJP83469.1;Name=RJP83469.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896418.1;locus_tag=C5O68_03530;product=K(+)-transporting ATPase subunit F;protein_id=RJP83469.1;transl_table=11 PTQV01000021.1 Genbank gene 8018 8743 . - . ID=gene-C5O68_03535;Name=C5O68_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03535 PTQV01000021.1 Protein Homology CDS 8018 8743 . - 0 ID=cds-RJP83458.1;Parent=gene-C5O68_03535;Dbxref=NCBI_GP:RJP83458.1;Name=RJP83458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046299.1;locus_tag=C5O68_03535;product=DNA-binding response regulator;protein_id=RJP83458.1;transl_table=11 PTQV01000021.1 Genbank gene 8733 11366 . - . ID=gene-C5O68_03540;Name=C5O68_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03540 PTQV01000021.1 Protein Homology CDS 8733 11366 . - 0 ID=cds-RJP83459.1;Parent=gene-C5O68_03540;Dbxref=NCBI_GP:RJP83459.1;Name=RJP83459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046297.1;locus_tag=C5O68_03540;product=histidine kinase;protein_id=RJP83459.1;transl_table=11 PTQV01000021.1 Genbank pseudogene 11444 12313 . + . ID=gene-C5O68_03545;Name=C5O68_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03545;pseudo=true PTQV01000021.1 Protein Homology CDS 11444 12313 . + 0 ID=cds-C5O68_03545;Parent=gene-C5O68_03545;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238800.1;locus_tag=C5O68_03545;product=ISL3 family transposase;pseudo=true;transl_table=11 PTQV01000021.1 Genbank gene 12381 13871 . - . ID=gene-C5O68_03550;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=C5O68_03550 PTQV01000021.1 Protein Homology CDS 12381 13871 . - 0 ID=cds-RJP83460.1;Parent=gene-C5O68_03550;Dbxref=NCBI_GP:RJP83460.1;Name=RJP83460.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358220.1;locus_tag=C5O68_03550;product=lysine--tRNA ligase;protein_id=RJP83460.1;transl_table=11 PTQV01000021.1 Genbank gene 14257 14889 . - . ID=gene-C5O68_03555;Name=C5O68_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03555 PTQV01000021.1 Protein Homology CDS 14257 14889 . - 0 ID=cds-RJP83461.1;Parent=gene-C5O68_03555;Dbxref=NCBI_GP:RJP83461.1;Name=RJP83461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397976.1;locus_tag=C5O68_03555;product=orotate phosphoribosyltransferase;protein_id=RJP83461.1;transl_table=11 PTQV01000021.1 Genbank gene 14924 15625 . - . ID=gene-C5O68_03560;Name=C5O68_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03560 PTQV01000021.1 Protein Homology CDS 14924 15625 . - 0 ID=cds-RJP83462.1;Parent=gene-C5O68_03560;Dbxref=NCBI_GP:RJP83462.1;Name=RJP83462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358207.1;locus_tag=C5O68_03560;product=orotidine-5'-phosphate decarboxylase;protein_id=RJP83462.1;transl_table=11 PTQV01000021.1 Genbank pseudogene 15944 16036 . + . ID=gene-C5O68_03565;Name=C5O68_03565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03565;pseudo=true PTQV01000021.1 Protein Homology CDS 15944 16036 . + 0 ID=cds-C5O68_03565;Parent=gene-C5O68_03565;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516271.1;locus_tag=C5O68_03565;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000021.1 Genbank gene 16371 17084 . - . ID=gene-C5O68_03570;Name=C5O68_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03570 PTQV01000021.1 Protein Homology CDS 16371 17084 . - 0 ID=cds-RJP83463.1;Parent=gene-C5O68_03570;Dbxref=NCBI_GP:RJP83463.1;Name=RJP83463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358205.1;locus_tag=C5O68_03570;product=hypothetical protein;protein_id=RJP83463.1;transl_table=11 PTQV01000021.1 Genbank gene 17077 17730 . - . ID=gene-C5O68_03575;Name=C5O68_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03575 PTQV01000021.1 Protein Homology CDS 17077 17730 . - 0 ID=cds-RJP83464.1;Parent=gene-C5O68_03575;Dbxref=NCBI_GP:RJP83464.1;Name=RJP83464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529917.1;locus_tag=C5O68_03575;product=ABC transporter ATP-binding protein;protein_id=RJP83464.1;transl_table=11 PTQV01000021.1 Genbank pseudogene 17747 17932 . - . ID=gene-C5O68_03580;Name=C5O68_03580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03580;pseudo=true PTQV01000021.1 Protein Homology CDS 17747 17932 . - 0 ID=cds-C5O68_03580;Parent=gene-C5O68_03580;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310242.1;locus_tag=C5O68_03580;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000021.1 Genbank pseudogene 18136 19249 . - . ID=gene-C5O68_03585;Name=C5O68_03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03585;pseudo=true PTQV01000021.1 Protein Homology CDS 18136 19249 . - 0 ID=cds-C5O68_03585;Parent=gene-C5O68_03585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817174.1;locus_tag=C5O68_03585;product=heme biosynthesis protein HemY;pseudo=true;transl_table=11 PTQV01000021.1 Genbank pseudogene 19286 19474 . - . ID=gene-C5O68_03590;Name=C5O68_03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03590;pseudo=true PTQV01000021.1 Protein Homology CDS 19286 19474 . - 0 ID=cds-C5O68_03590;Parent=gene-C5O68_03590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828969.1;locus_tag=C5O68_03590;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000021.1 Genbank gene 19458 20306 . - . ID=gene-C5O68_03595;Name=C5O68_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03595 PTQV01000021.1 Protein Homology CDS 19458 20306 . - 0 ID=cds-RJP83465.1;Parent=gene-C5O68_03595;Dbxref=NCBI_GP:RJP83465.1;Name=RJP83465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358201.1;locus_tag=C5O68_03595;product=peptidase M50 family protein;protein_id=RJP83465.1;transl_table=11 PTQV01000021.1 Genbank gene 21150 22370 . - . ID=gene-C5O68_03600;Name=C5O68_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03600 PTQV01000021.1 Protein Homology CDS 21150 22370 . - 0 ID=cds-RJP83466.1;Parent=gene-C5O68_03600;Dbxref=NCBI_GP:RJP83466.1;Name=RJP83466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358199.1;locus_tag=C5O68_03600;product=cell division protein DivIB;protein_id=RJP83466.1;transl_table=11 PTQV01000021.1 Genbank gene 22380 23438 . - . ID=gene-C5O68_03605;Name=C5O68_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03605 PTQV01000021.1 Protein Homology CDS 22380 23438 . - 0 ID=cds-RJP83467.1;Parent=gene-C5O68_03605;Dbxref=NCBI_GP:RJP83467.1;Name=RJP83467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358198.1;locus_tag=C5O68_03605;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=RJP83467.1;transl_table=11 PTQV01000021.1 Genbank gene 23440 24792 . - . ID=gene-C5O68_03610;Name=C5O68_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03610 PTQV01000021.1 Protein Homology CDS 23440 24792 . - 0 ID=cds-RJP83468.1;Parent=gene-C5O68_03610;Dbxref=NCBI_GP:RJP83468.1;Name=RJP83468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358197.1;locus_tag=C5O68_03610;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=RJP83468.1;transl_table=11 ##sequence-region PTQV01000022.1 1 31290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000022.1 Genbank region 1 31290 . + . ID=PTQV01000022.1:1..31290;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000022.1 Genbank gene 1 130 . - . ID=gene-C5O68_03615;Name=C5O68_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03615;partial=true;start_range=.,1 PTQV01000022.1 Protein Homology CDS 1 130 . - 0 ID=cds-RJP83413.1;Parent=gene-C5O68_03615;Dbxref=NCBI_GP:RJP83413.1;Name=RJP83413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_03615;partial=true;product=transposase;protein_id=RJP83413.1;start_range=.,1;transl_table=11 PTQV01000022.1 Genbank gene 194 316 . + . ID=gene-C5O68_03620;Name=C5O68_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03620 PTQV01000022.1 Protein Homology CDS 194 316 . + 0 ID=cds-RJP83388.1;Parent=gene-C5O68_03620;Dbxref=NCBI_GP:RJP83388.1;Name=RJP83388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284936.1;locus_tag=C5O68_03620;product=choline-binding protein A;protein_id=RJP83388.1;transl_table=11 PTQV01000022.1 Genbank pseudogene 533 836 . + . ID=gene-C5O68_03625;Name=C5O68_03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03625;pseudo=true PTQV01000022.1 Protein Homology CDS 533 836 . + 0 ID=cds-C5O68_03625;Parent=gene-C5O68_03625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445695.1;locus_tag=C5O68_03625;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PTQV01000022.1 Genbank gene 1021 1395 . + . ID=gene-C5O68_03630;Name=C5O68_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03630 PTQV01000022.1 Protein Homology CDS 1021 1395 . + 0 ID=cds-RJP83389.1;Parent=gene-C5O68_03630;Dbxref=NCBI_GP:RJP83389.1;Name=RJP83389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445693.1;locus_tag=C5O68_03630;product=murein hydrolase regulator LrgA;protein_id=RJP83389.1;transl_table=11 PTQV01000022.1 Genbank gene 1392 2087 . + . ID=gene-C5O68_03635;Name=C5O68_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03635 PTQV01000022.1 Protein Homology CDS 1392 2087 . + 0 ID=cds-RJP83390.1;Parent=gene-C5O68_03635;Dbxref=NCBI_GP:RJP83390.1;Name=RJP83390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445694.1;locus_tag=C5O68_03635;product=hypothetical protein;protein_id=RJP83390.1;transl_table=11 PTQV01000022.1 Genbank gene 3077 4276 . - . ID=gene-C5O68_03640;Name=C5O68_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03640 PTQV01000022.1 Protein Homology CDS 3077 4276 . - 0 ID=cds-RJP83391.1;Parent=gene-C5O68_03640;Dbxref=NCBI_GP:RJP83391.1;Name=RJP83391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359154.1;locus_tag=C5O68_03640;product=ABC transporter permease;protein_id=RJP83391.1;transl_table=11 PTQV01000022.1 Genbank gene 4255 5166 . - . ID=gene-C5O68_03645;Name=C5O68_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03645 PTQV01000022.1 Protein Homology CDS 4255 5166 . - 0 ID=cds-RJP83392.1;Parent=gene-C5O68_03645;Dbxref=NCBI_GP:RJP83392.1;Name=RJP83392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000895307.1;locus_tag=C5O68_03645;product=sodium ABC transporter ATP-binding protein;protein_id=RJP83392.1;transl_table=11 PTQV01000022.1 Genbank gene 5250 5480 . + . ID=gene-C5O68_03650;Name=C5O68_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03650 PTQV01000022.1 Protein Homology CDS 5250 5480 . + 0 ID=cds-RJP83393.1;Parent=gene-C5O68_03650;Dbxref=NCBI_GP:RJP83393.1;Name=RJP83393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1%2CRefSeq:WP_001846503.1;locus_tag=C5O68_03650;product=hypothetical protein;protein_id=RJP83393.1;transl_table=11 PTQV01000022.1 Genbank pseudogene 5669 5989 . + . ID=gene-C5O68_03655;Name=C5O68_03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03655;pseudo=true PTQV01000022.1 Protein Homology CDS 5669 5989 . + 0 ID=cds-C5O68_03655;Parent=gene-C5O68_03655;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=C5O68_03655;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000022.1 Genbank gene 6389 7006 . + . ID=gene-C5O68_03660;Name=C5O68_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03660 PTQV01000022.1 Protein Homology CDS 6389 7006 . + 0 ID=cds-RJP83394.1;Parent=gene-C5O68_03660;Dbxref=NCBI_GP:RJP83394.1;Name=RJP83394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446715.1;locus_tag=C5O68_03660;product=TVP38/TMEM64 family protein;protein_id=RJP83394.1;transl_table=11 PTQV01000022.1 Genbank gene 7326 8213 . - . ID=gene-C5O68_03665;Name=C5O68_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03665 PTQV01000022.1 Protein Homology CDS 7326 8213 . - 0 ID=cds-RJP83395.1;Parent=gene-C5O68_03665;Dbxref=NCBI_GP:RJP83395.1;Name=RJP83395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446716.1;locus_tag=C5O68_03665;product=fructokinase/branched chain amino acid--2-keto-4-methylthiobutyrate aminotransferase;protein_id=RJP83395.1;transl_table=11 PTQV01000022.1 Genbank gene 8362 10245 . - . ID=gene-C5O68_03670;Name=C5O68_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03670 PTQV01000022.1 Protein Homology CDS 8362 10245 . - 0 ID=cds-RJP83396.1;Parent=gene-C5O68_03670;Dbxref=NCBI_GP:RJP83396.1;Name=RJP83396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359159.1;locus_tag=C5O68_03670;product=PTS beta-glucoside transporter subunit EIIBCA;protein_id=RJP83396.1;transl_table=11 PTQV01000022.1 Genbank gene 10625 12079 . + . ID=gene-C5O68_03675;Name=C5O68_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03675 PTQV01000022.1 Protein Homology CDS 10625 12079 . + 0 ID=cds-RJP83397.1;Parent=gene-C5O68_03675;Dbxref=NCBI_GP:RJP83397.1;Name=RJP83397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359160.1;locus_tag=C5O68_03675;product=sucrose-6-phosphate hydrolase;protein_id=RJP83397.1;transl_table=11 PTQV01000022.1 Genbank gene 12060 13025 . + . ID=gene-C5O68_03680;Name=C5O68_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03680 PTQV01000022.1 Protein Homology CDS 12060 13025 . + 0 ID=cds-RJP83398.1;Parent=gene-C5O68_03680;Dbxref=NCBI_GP:RJP83398.1;Name=RJP83398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446719.1;locus_tag=C5O68_03680;product=LacI family transcriptional regulator;protein_id=RJP83398.1;transl_table=11 PTQV01000022.1 Genbank gene 13063 14337 . - . ID=gene-C5O68_03685;Name=C5O68_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03685 PTQV01000022.1 Protein Homology CDS 13063 14337 . - 0 ID=cds-RJP83399.1;Parent=gene-C5O68_03685;Dbxref=NCBI_GP:RJP83399.1;Name=RJP83399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359162.1;locus_tag=C5O68_03685;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=RJP83399.1;transl_table=11 PTQV01000022.1 Genbank gene 14337 15533 . - . ID=gene-C5O68_03690;Name=C5O68_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03690 PTQV01000022.1 Protein Homology CDS 14337 15533 . - 0 ID=cds-RJP83400.1;Parent=gene-C5O68_03690;Dbxref=NCBI_GP:RJP83400.1;Name=RJP83400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359163.1;locus_tag=C5O68_03690;product=hydroxymethylglutaryl-CoA synthase;protein_id=RJP83400.1;transl_table=11 PTQV01000022.1 Genbank gene 15640 15927 . - . ID=gene-C5O68_03695;Name=C5O68_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03695 PTQV01000022.1 Protein Homology CDS 15640 15927 . - 0 ID=cds-RJP83414.1;Parent=gene-C5O68_03695;Dbxref=NCBI_GP:RJP83414.1;Name=RJP83414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359164.1;locus_tag=C5O68_03695;product=hypothetical protein;protein_id=RJP83414.1;transl_table=11 PTQV01000022.1 Genbank gene 16049 16498 . - . ID=gene-C5O68_03700;Name=C5O68_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03700 PTQV01000022.1 Protein Homology CDS 16049 16498 . - 0 ID=cds-RJP83401.1;Parent=gene-C5O68_03700;Dbxref=NCBI_GP:RJP83401.1;Name=RJP83401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359167.1;locus_tag=C5O68_03700;product=hypothetical protein;protein_id=RJP83401.1;transl_table=11 PTQV01000022.1 Genbank gene 16500 17258 . - . ID=gene-C5O68_03705;Name=C5O68_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03705 PTQV01000022.1 Protein Homology CDS 16500 17258 . - 0 ID=cds-RJP83402.1;Parent=gene-C5O68_03705;Dbxref=NCBI_GP:RJP83402.1;Name=RJP83402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446723.1;locus_tag=C5O68_03705;product=threonine/serine exporter;protein_id=RJP83402.1;transl_table=11 PTQV01000022.1 Genbank gene 17373 19352 . - . ID=gene-C5O68_03710;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=C5O68_03710 PTQV01000022.1 Protein Homology CDS 17373 19352 . - 0 ID=cds-RJP83403.1;Parent=gene-C5O68_03710;Dbxref=NCBI_GP:RJP83403.1;Name=RJP83403.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359169.1;locus_tag=C5O68_03710;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=RJP83403.1;transl_table=11 PTQV01000022.1 Genbank gene 19349 20089 . - . ID=gene-C5O68_03715;Name=C5O68_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03715 PTQV01000022.1 Protein Homology CDS 19349 20089 . - 0 ID=cds-RJP83404.1;Parent=gene-C5O68_03715;Dbxref=NCBI_GP:RJP83404.1;Name=RJP83404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359170.1;locus_tag=C5O68_03715;product=protein phosphatase PhpP;protein_id=RJP83404.1;transl_table=11 PTQV01000022.1 Genbank gene 20104 21420 . - . ID=gene-C5O68_03720;Name=C5O68_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03720 PTQV01000022.1 Protein Homology CDS 20104 21420 . - 0 ID=cds-RJP83405.1;Parent=gene-C5O68_03720;Dbxref=NCBI_GP:RJP83405.1;Name=RJP83405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446726.1;locus_tag=C5O68_03720;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=RJP83405.1;transl_table=11 PTQV01000022.1 Genbank gene 21410 22345 . - . ID=gene-C5O68_03725;Name=C5O68_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03725 PTQV01000022.1 Protein Homology CDS 21410 22345 . - 0 ID=cds-RJP83406.1;Parent=gene-C5O68_03725;Dbxref=NCBI_GP:RJP83406.1;Name=RJP83406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446727.1;locus_tag=C5O68_03725;product=methionyl-tRNA formyltransferase;protein_id=RJP83406.1;transl_table=11 PTQV01000022.1 Genbank gene 22358 24754 . - . ID=gene-C5O68_03730;Name=C5O68_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03730 PTQV01000022.1 Protein Homology CDS 22358 24754 . - 0 ID=cds-RJP83407.1;Parent=gene-C5O68_03730;Dbxref=NCBI_GP:RJP83407.1;Name=RJP83407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446728.1;locus_tag=C5O68_03730;product=primosomal protein N';protein_id=RJP83407.1;transl_table=11 PTQV01000022.1 Genbank gene 24820 25134 . - . ID=gene-C5O68_03735;Name=C5O68_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03735 PTQV01000022.1 Protein Homology CDS 24820 25134 . - 0 ID=cds-RJP83408.1;Parent=gene-C5O68_03735;Dbxref=NCBI_GP:RJP83408.1;Name=RJP83408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359174.1;locus_tag=C5O68_03735;product=DNA-directed RNA polymerase subunit omega;protein_id=RJP83408.1;transl_table=11 PTQV01000022.1 Genbank gene 25159 25785 . - . ID=gene-C5O68_03740;Name=C5O68_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03740 PTQV01000022.1 Protein Homology CDS 25159 25785 . - 0 ID=cds-RJP83409.1;Parent=gene-C5O68_03740;Dbxref=NCBI_GP:RJP83409.1;Name=RJP83409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446730.1;locus_tag=C5O68_03740;product=guanylate kinase;protein_id=RJP83409.1;transl_table=11 PTQV01000022.1 Genbank gene 26066 27217 . + . ID=gene-C5O68_03745;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=C5O68_03745 PTQV01000022.1 Protein Homology CDS 26066 27217 . + 0 ID=cds-RJP83410.1;Parent=gene-C5O68_03745;Dbxref=NCBI_GP:RJP83410.1;Name=RJP83410.1;gbkey=CDS;gene=nagA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359458.1;locus_tag=C5O68_03745;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=RJP83410.1;transl_table=11 PTQV01000022.1 Genbank pseudogene 27455 27856 . - . ID=gene-C5O68_03750;Name=C5O68_03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03750;pseudo=true PTQV01000022.1 Protein Homology CDS 27455 27856 . - 0 ID=cds-C5O68_03750;Parent=gene-C5O68_03750;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=C5O68_03750;product=ISNCY family transposase;pseudo=true;transl_table=11 PTQV01000022.1 Genbank gene 28113 29930 . - . ID=gene-C5O68_03755;Name=C5O68_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03755 PTQV01000022.1 Protein Homology CDS 28113 29930 . - 0 ID=cds-RJP83411.1;Parent=gene-C5O68_03755;Dbxref=NCBI_GP:RJP83411.1;Name=RJP83411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445353.1;locus_tag=C5O68_03755;product=acetyltransferase;protein_id=RJP83411.1;transl_table=11 PTQV01000022.1 Genbank gene 30031 31173 . - . ID=gene-C5O68_03760;Name=C5O68_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03760 PTQV01000022.1 Protein Homology CDS 30031 31173 . - 0 ID=cds-RJP83412.1;Parent=gene-C5O68_03760;Dbxref=NCBI_GP:RJP83412.1;Name=RJP83412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004298827.1;locus_tag=C5O68_03760;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=RJP83412.1;transl_table=11 ##sequence-region PTQV01000023.1 1 61168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000023.1 Genbank region 1 61168 . + . ID=PTQV01000023.1:1..61168;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000023.1 Genbank gene 1 396 . + . ID=gene-C5O68_03765;Name=C5O68_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03765;partial=true;start_range=.,1 PTQV01000023.1 Protein Homology CDS 1 396 . + 0 ID=cds-RJP83260.1;Parent=gene-C5O68_03765;Dbxref=NCBI_GP:RJP83260.1;Name=RJP83260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397908.1;locus_tag=C5O68_03765;partial=true;product=hypothetical protein;protein_id=RJP83260.1;start_range=.,1;transl_table=11 PTQV01000023.1 Genbank gene 424 4035 . + . ID=gene-C5O68_03770;Name=C5O68_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03770 PTQV01000023.1 Protein Homology CDS 424 4035 . + 0 ID=cds-RJP83261.1;Parent=gene-C5O68_03770;Dbxref=NCBI_GP:RJP83261.1;Name=RJP83261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284821.1;locus_tag=C5O68_03770;product=sialidase;protein_id=RJP83261.1;transl_table=11 PTQV01000023.1 Genbank gene 4324 5298 . + . ID=gene-C5O68_03775;Name=C5O68_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03775 PTQV01000023.1 Protein Homology CDS 4324 5298 . + 0 ID=cds-RJP83262.1;Parent=gene-C5O68_03775;Dbxref=NCBI_GP:RJP83262.1;Name=RJP83262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603328.1;locus_tag=C5O68_03775;product=hypothetical protein;protein_id=RJP83262.1;transl_table=11 PTQV01000023.1 Genbank gene 6587 7039 . + . ID=gene-C5O68_03780;Name=C5O68_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03780 PTQV01000023.1 Protein Homology CDS 6587 7039 . + 0 ID=cds-RJP83263.1;Parent=gene-C5O68_03780;Dbxref=NCBI_GP:RJP83263.1;Name=RJP83263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359128.1;locus_tag=C5O68_03780;product=YhcH/YjgK/YiaL family protein;protein_id=RJP83263.1;transl_table=11 PTQV01000023.1 Genbank gene 7058 8395 . + . ID=gene-C5O68_03785;Name=C5O68_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03785 PTQV01000023.1 Protein Homology CDS 7058 8395 . + 0 ID=cds-RJP83264.1;Parent=gene-C5O68_03785;Dbxref=NCBI_GP:RJP83264.1;Name=RJP83264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359127.1;locus_tag=C5O68_03785;product=sugar ABC transporter substrate-binding protein;protein_id=RJP83264.1;transl_table=11 PTQV01000023.1 Genbank gene 8474 9358 . + . ID=gene-C5O68_03790;Name=C5O68_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03790 PTQV01000023.1 Protein Homology CDS 8474 9358 . + 0 ID=cds-RJP83265.1;Parent=gene-C5O68_03790;Dbxref=NCBI_GP:RJP83265.1;Name=RJP83265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359126.1;locus_tag=C5O68_03790;product=sugar ABC transporter permease;protein_id=RJP83265.1;transl_table=11 PTQV01000023.1 Genbank gene 9358 10191 . + . ID=gene-C5O68_03795;Name=C5O68_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03795 PTQV01000023.1 Protein Homology CDS 9358 10191 . + 0 ID=cds-RJP83266.1;Parent=gene-C5O68_03795;Dbxref=NCBI_GP:RJP83266.1;Name=RJP83266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359125.1;locus_tag=C5O68_03795;product=carbohydrate ABC transporter permease;protein_id=RJP83266.1;transl_table=11 PTQV01000023.1 Genbank gene 10209 12302 . + . ID=gene-C5O68_03800;Name=C5O68_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03800 PTQV01000023.1 Protein Homology CDS 10209 12302 . + 0 ID=cds-RJP83267.1;Parent=gene-C5O68_03800;Dbxref=NCBI_GP:RJP83267.1;Name=RJP83267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359124.1;locus_tag=C5O68_03800;product=sialidase;protein_id=RJP83267.1;transl_table=11 PTQV01000023.1 Genbank gene 12314 13417 . + . ID=gene-C5O68_03805;Name=C5O68_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03805 PTQV01000023.1 Protein Homology CDS 12314 13417 . + 0 ID=cds-RJP83268.1;Parent=gene-C5O68_03805;Dbxref=NCBI_GP:RJP83268.1;Name=RJP83268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241740.1;locus_tag=C5O68_03805;product=oxidoreductase;protein_id=RJP83268.1;transl_table=11 PTQV01000023.1 Genbank gene 13597 14295 . + . ID=gene-C5O68_03810;Name=C5O68_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03810 PTQV01000023.1 Protein Homology CDS 13597 14295 . + 0 ID=cds-RJP83269.1;Parent=gene-C5O68_03810;Dbxref=NCBI_GP:RJP83269.1;Name=RJP83269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359122.1;locus_tag=C5O68_03810;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=RJP83269.1;transl_table=11 PTQV01000023.1 Genbank gene 14351 15832 . + . ID=gene-C5O68_03815;Name=C5O68_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03815 PTQV01000023.1 Protein Homology CDS 14351 15832 . + 0 ID=cds-RJP83270.1;Parent=gene-C5O68_03815;Dbxref=NCBI_GP:RJP83270.1;Name=RJP83270.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834377.1;locus_tag=C5O68_03815;product=PTS glucose transporter subunit IIBC;protein_id=RJP83270.1;transl_table=11 PTQV01000023.1 Genbank gene 15956 17284 . + . ID=gene-C5O68_03820;Name=C5O68_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03820 PTQV01000023.1 Protein Homology CDS 15956 17284 . + 0 ID=cds-RJP83271.1;Parent=gene-C5O68_03820;Dbxref=NCBI_GP:RJP83271.1;Name=RJP83271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359120.1;locus_tag=C5O68_03820;product=carbohydrate ABC transporter substrate-binding protein;protein_id=RJP83271.1;transl_table=11 PTQV01000023.1 Genbank gene 17505 18401 . + . ID=gene-C5O68_03825;Name=C5O68_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03825 PTQV01000023.1 Protein Homology CDS 17505 18401 . + 0 ID=cds-RJP83272.1;Parent=gene-C5O68_03825;Dbxref=NCBI_GP:RJP83272.1;Name=RJP83272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359119.1;locus_tag=C5O68_03825;product=sugar ABC transporter permease;protein_id=RJP83272.1;transl_table=11 PTQV01000023.1 Genbank gene 18417 19256 . + . ID=gene-C5O68_03830;Name=C5O68_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03830 PTQV01000023.1 Protein Homology CDS 18417 19256 . + 0 ID=cds-RJP83273.1;Parent=gene-C5O68_03830;Dbxref=NCBI_GP:RJP83273.1;Name=RJP83273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359118.1;locus_tag=C5O68_03830;product=carbohydrate ABC transporter permease;protein_id=RJP83273.1;transl_table=11 PTQV01000023.1 Genbank pseudogene 19231 19326 . + . ID=gene-C5O68_03835;Name=C5O68_03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03835;pseudo=true PTQV01000023.1 Protein Homology CDS 19231 19326 . + 0 ID=cds-C5O68_03835;Parent=gene-C5O68_03835;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_03835;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000023.1 Genbank gene 19484 19936 . + . ID=gene-C5O68_03840;Name=C5O68_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03840 PTQV01000023.1 Protein Homology CDS 19484 19936 . + 0 ID=cds-RJP83274.1;Parent=gene-C5O68_03840;Dbxref=NCBI_GP:RJP83274.1;Name=RJP83274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359117.1;locus_tag=C5O68_03840;product=beta-galactosidase;protein_id=RJP83274.1;transl_table=11 PTQV01000023.1 Genbank gene 20263 20607 . + . ID=gene-C5O68_03845;Name=C5O68_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03845 PTQV01000023.1 Protein Homology CDS 20263 20607 . + 0 ID=cds-RJP83304.1;Parent=gene-C5O68_03845;Dbxref=NCBI_GP:RJP83304.1;Name=RJP83304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359116.1;locus_tag=C5O68_03845;product=hypothetical protein;protein_id=RJP83304.1;transl_table=11 PTQV01000023.1 Genbank gene 20617 20808 . + . ID=gene-C5O68_03850;Name=C5O68_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03850 PTQV01000023.1 Protein Homology CDS 20617 20808 . + 0 ID=cds-RJP83275.1;Parent=gene-C5O68_03850;Dbxref=NCBI_GP:RJP83275.1;Name=RJP83275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844411.1;locus_tag=C5O68_03850;product=hypothetical protein;protein_id=RJP83275.1;transl_table=11 PTQV01000023.1 Genbank gene 20891 21535 . + . ID=gene-C5O68_03855;Name=C5O68_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03855 PTQV01000023.1 Protein Homology CDS 20891 21535 . + 0 ID=cds-RJP83276.1;Parent=gene-C5O68_03855;Dbxref=NCBI_GP:RJP83276.1;Name=RJP83276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445724.1;locus_tag=C5O68_03855;product=DUF624 domain-containing protein;protein_id=RJP83276.1;transl_table=11 PTQV01000023.1 Genbank gene 21705 22622 . + . ID=gene-C5O68_03860;Name=C5O68_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03860 PTQV01000023.1 Protein Homology CDS 21705 22622 . + 0 ID=cds-RJP83277.1;Parent=gene-C5O68_03860;Dbxref=NCBI_GP:RJP83277.1;Name=RJP83277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445725.1;locus_tag=C5O68_03860;product=N-acetylneuraminate lyase;protein_id=RJP83277.1;transl_table=11 PTQV01000023.1 Genbank gene 22640 23524 . + . ID=gene-C5O68_03865;Name=C5O68_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03865 PTQV01000023.1 Protein Homology CDS 22640 23524 . + 0 ID=cds-RJP83278.1;Parent=gene-C5O68_03865;Dbxref=NCBI_GP:RJP83278.1;Name=RJP83278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359112.1;locus_tag=C5O68_03865;product=ROK family protein;protein_id=RJP83278.1;transl_table=11 PTQV01000023.1 Genbank gene 23621 23908 . + . ID=gene-C5O68_03870;Name=C5O68_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03870 PTQV01000023.1 Protein Homology CDS 23621 23908 . + 0 ID=cds-RJP83279.1;Parent=gene-C5O68_03870;Dbxref=NCBI_GP:RJP83279.1;Name=RJP83279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445727.1;locus_tag=C5O68_03870;product=hypothetical protein;protein_id=RJP83279.1;transl_table=11 PTQV01000023.1 Genbank gene 23898 24248 . + . ID=gene-C5O68_03875;Name=C5O68_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03875 PTQV01000023.1 Protein Homology CDS 23898 24248 . + 0 ID=cds-RJP83280.1;Parent=gene-C5O68_03875;Dbxref=NCBI_GP:RJP83280.1;Name=RJP83280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445728.1;locus_tag=C5O68_03875;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=RJP83280.1;transl_table=11 PTQV01000023.1 Genbank gene 24310 25161 . - . ID=gene-C5O68_03880;Name=C5O68_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03880 PTQV01000023.1 Protein Homology CDS 24310 25161 . - 0 ID=cds-RJP83281.1;Parent=gene-C5O68_03880;Dbxref=NCBI_GP:RJP83281.1;Name=RJP83281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359111.1;locus_tag=C5O68_03880;product=MurR/RpiR family transcriptional regulator;protein_id=RJP83281.1;transl_table=11 PTQV01000023.1 Genbank gene 25465 27522 . + . ID=gene-C5O68_03885;Name=C5O68_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03885 PTQV01000023.1 Protein Homology CDS 25465 27522 . + 0 ID=cds-RJP83282.1;Parent=gene-C5O68_03885;Dbxref=NCBI_GP:RJP83282.1;Name=RJP83282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359110.1;locus_tag=C5O68_03885;product=penicillin-binding protein;protein_id=RJP83282.1;transl_table=11 PTQV01000023.1 Genbank gene 27533 28129 . + . ID=gene-C5O68_03890;Name=C5O68_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03890 PTQV01000023.1 Protein Homology CDS 27533 28129 . + 0 ID=cds-RJP83283.1;Parent=gene-C5O68_03890;Dbxref=NCBI_GP:RJP83283.1;Name=RJP83283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002896112.1;locus_tag=C5O68_03890;product=recombination protein RecR;protein_id=RJP83283.1;transl_table=11 PTQV01000023.1 Genbank gene 28306 29349 . + . ID=gene-C5O68_03895;Name=C5O68_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03895 PTQV01000023.1 Protein Homology CDS 28306 29349 . + 0 ID=cds-RJP83284.1;Parent=gene-C5O68_03895;Dbxref=NCBI_GP:RJP83284.1;Name=RJP83284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445732.1;locus_tag=C5O68_03895;product=D-alanine--D-alanine ligase;protein_id=RJP83284.1;transl_table=11 PTQV01000023.1 Genbank gene 29434 30807 . + . ID=gene-C5O68_03900;Name=C5O68_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03900 PTQV01000023.1 Protein Homology CDS 29434 30807 . + 0 ID=cds-RJP83285.1;Parent=gene-C5O68_03900;Dbxref=NCBI_GP:RJP83285.1;Name=RJP83285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359107.1;locus_tag=C5O68_03900;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=RJP83285.1;transl_table=11 PTQV01000023.1 Genbank gene 30902 31606 . + . ID=gene-C5O68_03905;Name=C5O68_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03905 PTQV01000023.1 Protein Homology CDS 30902 31606 . + 0 ID=cds-RJP83286.1;Parent=gene-C5O68_03905;Dbxref=NCBI_GP:RJP83286.1;Name=RJP83286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359105.1;locus_tag=C5O68_03905;product=TIGR02206 family membrane protein;protein_id=RJP83286.1;transl_table=11 PTQV01000023.1 Genbank gene 31825 33198 . + . ID=gene-C5O68_03910;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=C5O68_03910 PTQV01000023.1 Protein Homology CDS 31825 33198 . + 0 ID=cds-RJP83287.1;Parent=gene-C5O68_03910;Dbxref=NCBI_GP:RJP83287.1;Name=RJP83287.1;gbkey=CDS;gene=ftsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359104.1;locus_tag=C5O68_03910;product=cell division protein FtsA;protein_id=RJP83287.1;transl_table=11 PTQV01000023.1 Genbank gene 33215 34474 . + . ID=gene-C5O68_03915;Name=C5O68_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03915 PTQV01000023.1 Protein Homology CDS 33215 34474 . + 0 ID=cds-RJP83288.1;Parent=gene-C5O68_03915;Dbxref=NCBI_GP:RJP83288.1;Name=RJP83288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359103.1;locus_tag=C5O68_03915;product=cell division protein FtsZ;protein_id=RJP83288.1;transl_table=11 PTQV01000023.1 Genbank gene 34479 35150 . + . ID=gene-C5O68_03920;Name=C5O68_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03920 PTQV01000023.1 Protein Homology CDS 34479 35150 . + 0 ID=cds-RJP83289.1;Parent=gene-C5O68_03920;Dbxref=NCBI_GP:RJP83289.1;Name=RJP83289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359102.1;locus_tag=C5O68_03920;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=RJP83289.1;transl_table=11 PTQV01000023.1 Genbank gene 35160 35699 . + . ID=gene-C5O68_03925;Name=C5O68_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03925 PTQV01000023.1 Protein Homology CDS 35160 35699 . + 0 ID=cds-RJP83290.1;Parent=gene-C5O68_03925;Dbxref=NCBI_GP:RJP83290.1;Name=RJP83290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359101.1;locus_tag=C5O68_03925;product=cell division protein SepF;protein_id=RJP83290.1;transl_table=11 PTQV01000023.1 Genbank gene 35699 35962 . + . ID=gene-C5O68_03930;Name=C5O68_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03930 PTQV01000023.1 Protein Homology CDS 35699 35962 . + 0 ID=cds-RJP83291.1;Parent=gene-C5O68_03930;Dbxref=NCBI_GP:RJP83291.1;Name=RJP83291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359100.1;locus_tag=C5O68_03930;product=YggT family protein;protein_id=RJP83291.1;transl_table=11 PTQV01000023.1 Genbank gene 35893 36744 . + . ID=gene-C5O68_03935;Name=C5O68_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03935 PTQV01000023.1 Protein Homology CDS 35893 36744 . + 0 ID=cds-RJP83292.1;Parent=gene-C5O68_03935;Dbxref=NCBI_GP:RJP83292.1;Name=RJP83292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359099.1;locus_tag=C5O68_03935;product=RNA-binding protein;protein_id=RJP83292.1;transl_table=11 PTQV01000023.1 Genbank pseudogene 36741 37539 . + . ID=gene-C5O68_03940;Name=C5O68_03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03940;pseudo=true PTQV01000023.1 Protein Homology CDS 36741 37539 . + 0 ID=cds-C5O68_03940;Parent=gene-C5O68_03940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359098.1;locus_tag=C5O68_03940;product=cell division protein DivIVA;pseudo=true;transl_table=11 PTQV01000023.1 Genbank gene 37582 37743 . + . ID=gene-C5O68_03945;Name=C5O68_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03945 PTQV01000023.1 Protein Homology CDS 37582 37743 . + 0 ID=cds-RJP83293.1;Parent=gene-C5O68_03945;Dbxref=NCBI_GP:RJP83293.1;Name=RJP83293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359096.1;locus_tag=C5O68_03945;product=hypothetical protein;protein_id=RJP83293.1;transl_table=11 PTQV01000023.1 Genbank gene 37887 40679 . + . ID=gene-C5O68_03950;Name=C5O68_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03950 PTQV01000023.1 Protein Homology CDS 37887 40679 . + 0 ID=cds-RJP83294.1;Parent=gene-C5O68_03950;Dbxref=NCBI_GP:RJP83294.1;Name=RJP83294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359095.1;locus_tag=C5O68_03950;product=isoleucine--tRNA ligase;protein_id=RJP83294.1;transl_table=11 PTQV01000023.1 Genbank gene 40863 46760 . + . ID=gene-C5O68_03955;Name=C5O68_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03955 PTQV01000023.1 Protein Homology CDS 40863 46760 . + 0 ID=cds-RJP83295.1;Parent=gene-C5O68_03955;Dbxref=NCBI_GP:RJP83295.1;Name=RJP83295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398910.1;locus_tag=C5O68_03955;product=peptidase M26;protein_id=RJP83295.1;transl_table=11 PTQV01000023.1 Genbank gene 46919 47611 . + . ID=gene-C5O68_03960;Name=C5O68_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03960 PTQV01000023.1 Protein Homology CDS 46919 47611 . + 0 ID=cds-RJP83296.1;Parent=gene-C5O68_03960;Dbxref=NCBI_GP:RJP83296.1;Name=RJP83296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359092.1;locus_tag=C5O68_03960;product=2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase;protein_id=RJP83296.1;transl_table=11 PTQV01000023.1 Genbank gene 47722 48423 . + . ID=gene-C5O68_03965;Name=C5O68_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03965 PTQV01000023.1 Protein Homology CDS 47722 48423 . + 0 ID=cds-RJP83305.1;Parent=gene-C5O68_03965;Dbxref=NCBI_GP:RJP83305.1;Name=RJP83305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445748.1;locus_tag=C5O68_03965;product=macrolide ABC transporter ATP-binding protein;protein_id=RJP83305.1;transl_table=11 PTQV01000023.1 Genbank pseudogene 48425 49443 . + . ID=gene-C5O68_03970;Name=C5O68_03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03970;pseudo=true PTQV01000023.1 Protein Homology CDS 48425 49443 . + 0 ID=cds-C5O68_03970;Parent=gene-C5O68_03970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238355.1;locus_tag=C5O68_03970;product=peptide ABC transporter permease;pseudo=true;transl_table=11 PTQV01000023.1 Genbank pseudogene 49456 51140 . + . ID=gene-C5O68_03975;Name=C5O68_03975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_03975;pseudo=true PTQV01000023.1 Protein Homology CDS 49456 51140 . + 0 ID=cds-C5O68_03975;Parent=gene-C5O68_03975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238354.1;locus_tag=C5O68_03975;product=ABC transporter permease;pseudo=true;transl_table=11 PTQV01000023.1 Genbank gene 51231 51722 . - . ID=gene-C5O68_03980;Name=C5O68_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03980 PTQV01000023.1 Protein Homology CDS 51231 51722 . - 0 ID=cds-RJP83306.1;Parent=gene-C5O68_03980;Dbxref=NCBI_GP:RJP83306.1;Name=RJP83306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445750.1;locus_tag=C5O68_03980;product=thiol peroxidase;protein_id=RJP83306.1;transl_table=11 PTQV01000023.1 Genbank gene 51997 52926 . - . ID=gene-C5O68_03985;Name=psaA;gbkey=Gene;gene=psaA;gene_biotype=protein_coding;locus_tag=C5O68_03985 PTQV01000023.1 Protein Homology CDS 51997 52926 . - 0 ID=cds-RJP83297.1;Parent=gene-C5O68_03985;Dbxref=NCBI_GP:RJP83297.1;Name=RJP83297.1;gbkey=CDS;gene=psaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359087.1;locus_tag=C5O68_03985;product=metal ABC transporter substrate-binding lipoprotein/adhesin PsaA;protein_id=RJP83297.1;transl_table=11 PTQV01000023.1 Genbank gene 52958 53806 . - . ID=gene-C5O68_03990;Name=C5O68_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03990 PTQV01000023.1 Protein Homology CDS 52958 53806 . - 0 ID=cds-RJP83298.1;Parent=gene-C5O68_03990;Dbxref=NCBI_GP:RJP83298.1;Name=RJP83298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359086.1;locus_tag=C5O68_03990;product=metal ABC transporter permease;protein_id=RJP83298.1;transl_table=11 PTQV01000023.1 Genbank gene 53803 54525 . - . ID=gene-C5O68_03995;Name=C5O68_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_03995 PTQV01000023.1 Protein Homology CDS 53803 54525 . - 0 ID=cds-RJP83299.1;Parent=gene-C5O68_03995;Dbxref=NCBI_GP:RJP83299.1;Name=RJP83299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445753.1;locus_tag=C5O68_03995;product=manganese ABC transporter ATP-binding protein;protein_id=RJP83299.1;transl_table=11 PTQV01000023.1 Genbank gene 54816 56708 . + . ID=gene-C5O68_04000;Name=C5O68_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04000 PTQV01000023.1 Protein Homology CDS 54816 56708 . + 0 ID=cds-RJP83300.1;Parent=gene-C5O68_04000;Dbxref=NCBI_GP:RJP83300.1;Name=RJP83300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359084.1;locus_tag=C5O68_04000;product=endopeptidase;protein_id=RJP83300.1;transl_table=11 PTQV01000023.1 Genbank gene 56890 57546 . + . ID=gene-C5O68_04005;Name=C5O68_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04005 PTQV01000023.1 Protein Homology CDS 56890 57546 . + 0 ID=cds-RJP83301.1;Parent=gene-C5O68_04005;Dbxref=NCBI_GP:RJP83301.1;Name=RJP83301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078993.1;locus_tag=C5O68_04005;product=resolvase;protein_id=RJP83301.1;transl_table=11 PTQV01000023.1 Genbank gene 57942 60686 . + . ID=gene-C5O68_04010;Name=C5O68_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04010 PTQV01000023.1 Protein Homology CDS 57942 60686 . + 0 ID=cds-RJP83302.1;Parent=gene-C5O68_04010;Dbxref=NCBI_GP:RJP83302.1;Name=RJP83302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038248.1;locus_tag=C5O68_04010;product=sialidase;protein_id=RJP83302.1;transl_table=11 PTQV01000023.1 Genbank gene 60825 61168 . - . ID=gene-C5O68_04015;Name=C5O68_04015;end_range=61168,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04015;partial=true PTQV01000023.1 Protein Homology CDS 60825 61168 . - 2 ID=cds-RJP83303.1;Parent=gene-C5O68_04015;Dbxref=NCBI_GP:RJP83303.1;Name=RJP83303.1;end_range=61168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772509.1%2CRefSeq:WP_016397908.1;locus_tag=C5O68_04015;partial=true;product=hypothetical protein;protein_id=RJP83303.1;transl_table=11 ##sequence-region PTQV01000024.1 1 28492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000024.1 Genbank region 1 28492 . + . ID=PTQV01000024.1:1..28492;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000024.1 Genbank gene 112 1518 . + . ID=gene-C5O68_04020;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=C5O68_04020 PTQV01000024.1 Protein Homology CDS 112 1518 . + 0 ID=cds-RJP83224.1;Parent=gene-C5O68_04020;Dbxref=NCBI_GP:RJP83224.1;Name=RJP83224.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398931.1;locus_tag=C5O68_04020;product=ATP synthase subunit beta;protein_id=RJP83224.1;transl_table=11 PTQV01000024.1 Genbank gene 1529 1948 . + . ID=gene-C5O68_04025;Name=C5O68_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04025 PTQV01000024.1 Protein Homology CDS 1529 1948 . + 0 ID=cds-RJP83225.1;Parent=gene-C5O68_04025;Dbxref=NCBI_GP:RJP83225.1;Name=RJP83225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358952.1;locus_tag=C5O68_04025;product=F0F1 ATP synthase subunit epsilon;protein_id=RJP83225.1;transl_table=11 PTQV01000024.1 Genbank gene 2192 3205 . - . ID=gene-C5O68_04030;Name=C5O68_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04030 PTQV01000024.1 Protein Homology CDS 2192 3205 . - 0 ID=cds-RJP83226.1;Parent=gene-C5O68_04030;Dbxref=NCBI_GP:RJP83226.1;Name=RJP83226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358951.1;locus_tag=C5O68_04030;product=6-phosphogluconolactonase;protein_id=RJP83226.1;transl_table=11 PTQV01000024.1 Genbank gene 3349 4515 . + . ID=gene-C5O68_04035;Name=C5O68_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04035 PTQV01000024.1 Protein Homology CDS 3349 4515 . + 0 ID=cds-RJP83227.1;Parent=gene-C5O68_04035;Dbxref=NCBI_GP:RJP83227.1;Name=RJP83227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358950.1;locus_tag=C5O68_04035;product=AI-2E family transporter;protein_id=RJP83227.1;transl_table=11 PTQV01000024.1 Genbank gene 4523 5734 . + . ID=gene-C5O68_04040;Name=C5O68_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04040 PTQV01000024.1 Protein Homology CDS 4523 5734 . + 0 ID=cds-RJP83245.1;Parent=gene-C5O68_04040;Dbxref=NCBI_GP:RJP83245.1;Name=RJP83245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446408.1;locus_tag=C5O68_04040;product=hypothetical protein;protein_id=RJP83245.1;transl_table=11 PTQV01000024.1 Genbank gene 5880 6521 . + . ID=gene-C5O68_04045;Name=C5O68_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04045 PTQV01000024.1 Protein Homology CDS 5880 6521 . + 0 ID=cds-RJP83228.1;Parent=gene-C5O68_04045;Dbxref=NCBI_GP:RJP83228.1;Name=RJP83228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446407.1;locus_tag=C5O68_04045;product=amino acid ABC transporter permease;protein_id=RJP83228.1;transl_table=11 PTQV01000024.1 Genbank gene 6531 7160 . + . ID=gene-C5O68_04050;Name=C5O68_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04050 PTQV01000024.1 Protein Homology CDS 6531 7160 . + 0 ID=cds-RJP83229.1;Parent=gene-C5O68_04050;Dbxref=NCBI_GP:RJP83229.1;Name=RJP83229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358947.1;locus_tag=C5O68_04050;product=amino acid ABC transporter ATP-binding protein;protein_id=RJP83229.1;transl_table=11 PTQV01000024.1 Genbank gene 7173 8009 . + . ID=gene-C5O68_04055;Name=C5O68_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04055 PTQV01000024.1 Protein Homology CDS 7173 8009 . + 0 ID=cds-RJP83230.1;Parent=gene-C5O68_04055;Dbxref=NCBI_GP:RJP83230.1;Name=RJP83230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358946.1;locus_tag=C5O68_04055;product=glutamine ABC transporter substrate-binding protein;protein_id=RJP83230.1;transl_table=11 PTQV01000024.1 Genbank gene 8289 8636 . - . ID=gene-C5O68_04060;Name=C5O68_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04060 PTQV01000024.1 Protein Homology CDS 8289 8636 . - 0 ID=cds-RJP83231.1;Parent=gene-C5O68_04060;Dbxref=NCBI_GP:RJP83231.1;Name=RJP83231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358945.1;locus_tag=C5O68_04060;product=thiol reductase thioredoxin;protein_id=RJP83231.1;transl_table=11 PTQV01000024.1 Genbank gene 8748 10466 . - . ID=gene-C5O68_04065;Name=C5O68_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04065 PTQV01000024.1 Protein Homology CDS 8748 10466 . - 0 ID=cds-RJP83232.1;Parent=gene-C5O68_04065;Dbxref=NCBI_GP:RJP83232.1;Name=RJP83232.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446284.1;locus_tag=C5O68_04065;product=phosphoglucomutase;protein_id=RJP83232.1;transl_table=11 PTQV01000024.1 Genbank gene 10793 11803 . - . ID=gene-C5O68_04070;Name=C5O68_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04070 PTQV01000024.1 Protein Homology CDS 10793 11803 . - 0 ID=cds-RJP83233.1;Parent=gene-C5O68_04070;Dbxref=NCBI_GP:RJP83233.1;Name=RJP83233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000603336.1;locus_tag=C5O68_04070;product=hypothetical protein;protein_id=RJP83233.1;transl_table=11 PTQV01000024.1 Genbank gene 12012 12257 . - . ID=gene-C5O68_04075;Name=C5O68_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04075 PTQV01000024.1 Protein Homology CDS 12012 12257 . - 0 ID=cds-RJP83234.1;Parent=gene-C5O68_04075;Dbxref=NCBI_GP:RJP83234.1;Name=RJP83234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445203.1;locus_tag=C5O68_04075;product=hypothetical protein;protein_id=RJP83234.1;transl_table=11 PTQV01000024.1 Genbank gene 12262 12366 . - . ID=gene-C5O68_04080;Name=C5O68_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04080 PTQV01000024.1 Protein Homology CDS 12262 12366 . - 0 ID=cds-RJP83235.1;Parent=gene-C5O68_04080;Dbxref=NCBI_GP:RJP83235.1;Name=RJP83235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233180.1;locus_tag=C5O68_04080;product=damage-inducible protein CinA;protein_id=RJP83235.1;transl_table=11 PTQV01000024.1 Genbank gene 12413 13303 . - . ID=gene-C5O68_04085;Name=C5O68_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04085 PTQV01000024.1 Protein Homology CDS 12413 13303 . - 0 ID=cds-RJP83236.1;Parent=gene-C5O68_04085;Dbxref=NCBI_GP:RJP83236.1;Name=RJP83236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445715.1;locus_tag=C5O68_04085;product=hypothetical protein;protein_id=RJP83236.1;transl_table=11 PTQV01000024.1 Genbank gene 13762 16281 . + . ID=gene-C5O68_04090;Name=C5O68_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04090 PTQV01000024.1 Protein Homology CDS 13762 16281 . + 0 ID=cds-RJP83237.1;Parent=gene-C5O68_04090;Dbxref=NCBI_GP:RJP83237.1;Name=RJP83237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168;locus_tag=C5O68_04090;product=hypothetical protein;protein_id=RJP83237.1;transl_table=11 PTQV01000024.1 Genbank gene 16377 19649 . + . ID=gene-C5O68_04095;Name=C5O68_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04095 PTQV01000024.1 GeneMarkS+ CDS 16377 19649 . + 0 ID=cds-RJP83238.1;Parent=gene-C5O68_04095;Dbxref=NCBI_GP:RJP83238.1;Name=RJP83238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_04095;product=hypothetical protein;protein_id=RJP83238.1;transl_table=11 PTQV01000024.1 Genbank gene 19826 21379 . + . ID=gene-C5O68_04100;Name=C5O68_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04100 PTQV01000024.1 Protein Homology CDS 19826 21379 . + 0 ID=cds-RJP83239.1;Parent=gene-C5O68_04100;Dbxref=NCBI_GP:RJP83239.1;Name=RJP83239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358938.1;locus_tag=C5O68_04100;product=hypothetical protein;protein_id=RJP83239.1;transl_table=11 PTQV01000024.1 Genbank gene 21602 22471 . + . ID=gene-C5O68_04105;Name=C5O68_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04105 PTQV01000024.1 Protein Homology CDS 21602 22471 . + 0 ID=cds-RJP83240.1;Parent=gene-C5O68_04105;Dbxref=NCBI_GP:RJP83240.1;Name=RJP83240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358937.1;locus_tag=C5O68_04105;product=aquaporin family protein;protein_id=RJP83240.1;transl_table=11 PTQV01000024.1 Genbank pseudogene 22625 22820 . - . ID=gene-C5O68_04110;Name=C5O68_04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04110;pseudo=true PTQV01000024.1 Protein Homology CDS 22625 22820 . - 0 ID=cds-C5O68_04110;Parent=gene-C5O68_04110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000461757.1;locus_tag=C5O68_04110;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000024.1 Genbank gene 23526 24722 . + . ID=gene-C5O68_04115;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=C5O68_04115 PTQV01000024.1 Protein Homology CDS 23526 24722 . + 0 ID=cds-RJP83241.1;Parent=gene-C5O68_04115;Dbxref=NCBI_GP:RJP83241.1;Name=RJP83241.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=C5O68_04115;product=elongation factor Tu;protein_id=RJP83241.1;transl_table=11 PTQV01000024.1 Genbank pseudogene 24820 24891 . + . ID=gene-C5O68_04120;Name=C5O68_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04120;pseudo=true PTQV01000024.1 Protein Homology CDS 24820 24891 . + 0 ID=cds-C5O68_04120;Parent=gene-C5O68_04120;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=C5O68_04120;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000024.1 Genbank gene 25428 26510 . - . ID=gene-C5O68_04125;Name=C5O68_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04125 PTQV01000024.1 Protein Homology CDS 25428 26510 . - 0 ID=cds-RJP83242.1;Parent=gene-C5O68_04125;Dbxref=NCBI_GP:RJP83242.1;Name=RJP83242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446035.1;locus_tag=C5O68_04125;product=ATP-dependent helicase;protein_id=RJP83242.1;transl_table=11 PTQV01000024.1 Genbank gene 26507 27484 . - . ID=gene-C5O68_04130;Name=C5O68_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04130 PTQV01000024.1 Protein Homology CDS 26507 27484 . - 0 ID=cds-RJP83243.1;Parent=gene-C5O68_04130;Dbxref=NCBI_GP:RJP83243.1;Name=RJP83243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446036.1;locus_tag=C5O68_04130;product=gfo/Idh/MocA family oxidoreductase;protein_id=RJP83243.1;transl_table=11 PTQV01000024.1 Genbank gene 27682 28492 . + . ID=gene-C5O68_04135;Name=C5O68_04135;end_range=28492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04135;partial=true PTQV01000024.1 Protein Homology CDS 27682 28492 . + 0 ID=cds-RJP83244.1;Parent=gene-C5O68_04135;Dbxref=NCBI_GP:RJP83244.1;Name=RJP83244.1;end_range=28492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445202.1;locus_tag=C5O68_04135;partial=true;product=hypothetical protein;protein_id=RJP83244.1;transl_table=11 ##sequence-region PTQV01000025.1 1 49789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000025.1 Genbank region 1 49789 . + . ID=PTQV01000025.1:1..49789;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000025.1 Genbank pseudogene 34 219 . + . ID=gene-C5O68_04140;Name=C5O68_04140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04140;pseudo=true PTQV01000025.1 Protein Homology CDS 34 219 . + 0 ID=cds-C5O68_04140;Parent=gene-C5O68_04140;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_04140;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000025.1 Genbank gene 203 385 . - . ID=gene-C5O68_04145;Name=C5O68_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04145 PTQV01000025.1 Protein Homology CDS 203 385 . - 0 ID=cds-RJP83193.1;Parent=gene-C5O68_04145;Dbxref=NCBI_GP:RJP83193.1;Name=RJP83193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855484.1;locus_tag=C5O68_04145;product=hypothetical protein;protein_id=RJP83193.1;transl_table=11 PTQV01000025.1 Genbank gene 513 2492 . + . ID=gene-C5O68_04150;Name=C5O68_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04150 PTQV01000025.1 Protein Homology CDS 513 2492 . + 0 ID=cds-RJP83147.1;Parent=gene-C5O68_04150;Dbxref=NCBI_GP:RJP83147.1;Name=RJP83147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359299.1;locus_tag=C5O68_04150;product=peptide ABC transporter substrate-binding protein;protein_id=RJP83147.1;transl_table=11 PTQV01000025.1 Genbank gene 2559 4055 . + . ID=gene-C5O68_04155;Name=C5O68_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04155 PTQV01000025.1 Protein Homology CDS 2559 4055 . + 0 ID=cds-RJP83148.1;Parent=gene-C5O68_04155;Dbxref=NCBI_GP:RJP83148.1;Name=RJP83148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359298.1;locus_tag=C5O68_04155;product=ABC transporter permease;protein_id=RJP83148.1;transl_table=11 PTQV01000025.1 Genbank gene 4055 4981 . + . ID=gene-C5O68_04160;Name=C5O68_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04160 PTQV01000025.1 Protein Homology CDS 4055 4981 . + 0 ID=cds-RJP83149.1;Parent=gene-C5O68_04160;Dbxref=NCBI_GP:RJP83149.1;Name=RJP83149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445463.1;locus_tag=C5O68_04160;product=ABC transporter permease;protein_id=RJP83149.1;transl_table=11 PTQV01000025.1 Genbank gene 4990 6057 . + . ID=gene-C5O68_04165;Name=C5O68_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04165 PTQV01000025.1 Protein Homology CDS 4990 6057 . + 0 ID=cds-RJP83150.1;Parent=gene-C5O68_04165;Dbxref=NCBI_GP:RJP83150.1;Name=RJP83150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359296.1;locus_tag=C5O68_04165;product=ABC transporter ATP-binding protein;protein_id=RJP83150.1;transl_table=11 PTQV01000025.1 Genbank gene 6068 6994 . + . ID=gene-C5O68_04170;Name=C5O68_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04170 PTQV01000025.1 Protein Homology CDS 6068 6994 . + 0 ID=cds-RJP83151.1;Parent=gene-C5O68_04170;Dbxref=NCBI_GP:RJP83151.1;Name=RJP83151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445465.1;locus_tag=C5O68_04170;product=ABC transporter ATP-binding protein;protein_id=RJP83151.1;transl_table=11 PTQV01000025.1 Genbank pseudogene 7552 8529 . + . ID=gene-C5O68_04175;Name=C5O68_04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04175;pseudo=true PTQV01000025.1 Protein Homology CDS 7552 8529 . + 0 ID=cds-C5O68_04175;Parent=gene-C5O68_04175;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445466.1;locus_tag=C5O68_04175;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PTQV01000025.1 Genbank gene 8541 9434 . + . ID=gene-C5O68_04180;Name=C5O68_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04180 PTQV01000025.1 Protein Homology CDS 8541 9434 . + 0 ID=cds-RJP83152.1;Parent=gene-C5O68_04180;Dbxref=NCBI_GP:RJP83152.1;Name=RJP83152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445467.1;locus_tag=C5O68_04180;product=ABC transporter permease;protein_id=RJP83152.1;transl_table=11 PTQV01000025.1 Genbank gene 9447 10250 . + . ID=gene-C5O68_04185;Name=C5O68_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04185 PTQV01000025.1 Protein Homology CDS 9447 10250 . + 0 ID=cds-RJP83153.1;Parent=gene-C5O68_04185;Dbxref=NCBI_GP:RJP83153.1;Name=RJP83153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445468.1;locus_tag=C5O68_04185;product=ABC transporter ATP-binding protein;protein_id=RJP83153.1;transl_table=11 PTQV01000025.1 Genbank gene 10283 10993 . - . ID=gene-C5O68_04190;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=C5O68_04190 PTQV01000025.1 Protein Homology CDS 10283 10993 . - 0 ID=cds-RJP83154.1;Parent=gene-C5O68_04190;Dbxref=NCBI_GP:RJP83154.1;Name=RJP83154.1;gbkey=CDS;gene=treR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359292.1;locus_tag=C5O68_04190;product=trehalose operon repressor;protein_id=RJP83154.1;transl_table=11 PTQV01000025.1 Genbank gene 11178 13133 . + . ID=gene-C5O68_04195;Name=C5O68_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04195 PTQV01000025.1 Protein Homology CDS 11178 13133 . + 0 ID=cds-RJP83155.1;Parent=gene-C5O68_04195;Dbxref=NCBI_GP:RJP83155.1;Name=RJP83155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864201.1;locus_tag=C5O68_04195;product=PTS trehalose transporter subunit IIBC;protein_id=RJP83155.1;transl_table=11 PTQV01000025.1 Genbank gene 13197 14822 . + . ID=gene-C5O68_04200;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=C5O68_04200 PTQV01000025.1 Protein Homology CDS 13197 14822 . + 0 ID=cds-RJP83156.1;Parent=gene-C5O68_04200;Dbxref=NCBI_GP:RJP83156.1;Name=RJP83156.1;gbkey=CDS;gene=treC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359290.1;locus_tag=C5O68_04200;product=alpha%2Calpha-phosphotrehalase;protein_id=RJP83156.1;transl_table=11 PTQV01000025.1 Genbank gene 15373 16656 . + . ID=gene-C5O68_04205;Name=C5O68_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04205 PTQV01000025.1 Protein Homology CDS 15373 16656 . + 0 ID=cds-RJP83157.1;Parent=gene-C5O68_04205;Dbxref=NCBI_GP:RJP83157.1;Name=RJP83157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446840.1;locus_tag=C5O68_04205;product=trigger factor;protein_id=RJP83157.1;transl_table=11 PTQV01000025.1 Genbank gene 16704 19070 . - . ID=gene-C5O68_04210;Name=C5O68_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04210 PTQV01000025.1 Protein Homology CDS 16704 19070 . - 0 ID=cds-RJP83158.1;Parent=gene-C5O68_04210;Dbxref=NCBI_GP:RJP83158.1;Name=RJP83158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446839.1;locus_tag=C5O68_04210;product=ATP-dependent RecD-like DNA helicase;protein_id=RJP83158.1;transl_table=11 PTQV01000025.1 Genbank gene 19330 19944 . - . ID=gene-C5O68_04215;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=C5O68_04215 PTQV01000025.1 Protein Homology CDS 19330 19944 . - 0 ID=cds-RJP83159.1;Parent=gene-C5O68_04215;Dbxref=NCBI_GP:RJP83159.1;Name=RJP83159.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357958.1;locus_tag=C5O68_04215;product=signal peptidase I;protein_id=RJP83159.1;transl_table=11 PTQV01000025.1 Genbank gene 19948 20829 . - . ID=gene-C5O68_04220;Name=C5O68_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04220 PTQV01000025.1 Protein Homology CDS 19948 20829 . - 0 ID=cds-RJP83160.1;Parent=gene-C5O68_04220;Dbxref=NCBI_GP:RJP83160.1;Name=RJP83160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446837.1;locus_tag=C5O68_04220;product=ribonuclease HIII;protein_id=RJP83160.1;transl_table=11 PTQV01000025.1 Genbank gene 20916 21218 . + . ID=gene-C5O68_04225;Name=C5O68_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04225 PTQV01000025.1 Protein Homology CDS 20916 21218 . + 0 ID=cds-RJP83161.1;Parent=gene-C5O68_04225;Dbxref=NCBI_GP:RJP83161.1;Name=RJP83161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446836.1;locus_tag=C5O68_04225;product=hypothetical protein;protein_id=RJP83161.1;transl_table=11 PTQV01000025.1 Genbank gene 21215 21763 . + . ID=gene-C5O68_04230;Name=C5O68_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04230 PTQV01000025.1 Protein Homology CDS 21215 21763 . + 0 ID=cds-RJP83162.1;Parent=gene-C5O68_04230;Dbxref=NCBI_GP:RJP83162.1;Name=RJP83162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446835.1;locus_tag=C5O68_04230;product=CvpA family protein;protein_id=RJP83162.1;transl_table=11 PTQV01000025.1 Genbank gene 21867 24203 . + . ID=gene-C5O68_04235;Name=C5O68_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04235 PTQV01000025.1 Protein Homology CDS 21867 24203 . + 0 ID=cds-RJP83163.1;Parent=gene-C5O68_04235;Dbxref=NCBI_GP:RJP83163.1;Name=RJP83163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357962.1;locus_tag=C5O68_04235;product=endonuclease MutS2;protein_id=RJP83163.1;transl_table=11 PTQV01000025.1 cmsearch riboswitch 24367 24455 . + . ID=id-PTQV01000025.1:24367..24455;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000025.1 Genbank gene 24546 25868 . + . ID=gene-C5O68_04240;Name=C5O68_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04240 PTQV01000025.1 Protein Homology CDS 24546 25868 . + 0 ID=cds-RJP83164.1;Parent=gene-C5O68_04240;Dbxref=NCBI_GP:RJP83164.1;Name=RJP83164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357963.1;locus_tag=C5O68_04240;product=sodium:alanine symporter family protein;protein_id=RJP83164.1;transl_table=11 PTQV01000025.1 Genbank gene 26086 26634 . + . ID=gene-C5O68_04245;Name=C5O68_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04245 PTQV01000025.1 Protein Homology CDS 26086 26634 . + 0 ID=cds-RJP83165.1;Parent=gene-C5O68_04245;Dbxref=NCBI_GP:RJP83165.1;Name=RJP83165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357964.1;locus_tag=C5O68_04245;product=carboxymuconolactone decarboxylase family protein;protein_id=RJP83165.1;transl_table=11 PTQV01000025.1 Genbank gene 26744 27643 . + . ID=gene-C5O68_04250;Name=C5O68_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04250 PTQV01000025.1 Protein Homology CDS 26744 27643 . + 0 ID=cds-RJP83166.1;Parent=gene-C5O68_04250;Dbxref=NCBI_GP:RJP83166.1;Name=RJP83166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446821.1;locus_tag=C5O68_04250;product=C4-dicarboxylate ABC transporter;protein_id=RJP83166.1;transl_table=11 PTQV01000025.1 Genbank gene 27668 28942 . - . ID=gene-C5O68_04255;Name=C5O68_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04255 PTQV01000025.1 Protein Homology CDS 27668 28942 . - 0 ID=cds-RJP83167.1;Parent=gene-C5O68_04255;Dbxref=NCBI_GP:RJP83167.1;Name=RJP83167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357966.2;locus_tag=C5O68_04255;product=serine--tRNA ligase;protein_id=RJP83167.1;transl_table=11 PTQV01000025.1 Genbank gene 29155 29526 . - . ID=gene-C5O68_04260;Name=C5O68_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04260 PTQV01000025.1 Protein Homology CDS 29155 29526 . - 0 ID=cds-RJP83168.1;Parent=gene-C5O68_04260;Dbxref=NCBI_GP:RJP83168.1;Name=RJP83168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357967.1;locus_tag=C5O68_04260;product=DUF956 domain-containing protein;protein_id=RJP83168.1;transl_table=11 PTQV01000025.1 Genbank gene 29529 30893 . - . ID=gene-C5O68_04265;Name=C5O68_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04265 PTQV01000025.1 Protein Homology CDS 29529 30893 . - 0 ID=cds-RJP83169.1;Parent=gene-C5O68_04265;Dbxref=NCBI_GP:RJP83169.1;Name=RJP83169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357968.1;locus_tag=C5O68_04265;product=aspartate kinase;protein_id=RJP83169.1;transl_table=11 PTQV01000025.1 Genbank gene 30977 31081 . - . ID=gene-C5O68_04270;Name=C5O68_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04270 PTQV01000025.1 Protein Homology CDS 30977 31081 . - 0 ID=cds-RJP83170.1;Parent=gene-C5O68_04270;Dbxref=NCBI_GP:RJP83170.1;Name=RJP83170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808883.1;locus_tag=C5O68_04270;product=aspartate kinase;protein_id=RJP83170.1;transl_table=11 PTQV01000025.1 Genbank gene 31218 32003 . + . ID=gene-C5O68_04275;Name=C5O68_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04275 PTQV01000025.1 Protein Homology CDS 31218 32003 . + 0 ID=cds-RJP83171.1;Parent=gene-C5O68_04275;Dbxref=NCBI_GP:RJP83171.1;Name=RJP83171.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357969.1;locus_tag=C5O68_04275;product=enoyl-CoA hydratase;protein_id=RJP83171.1;transl_table=11 PTQV01000025.1 Genbank gene 32097 32531 . + . ID=gene-C5O68_04280;Name=C5O68_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04280 PTQV01000025.1 Protein Homology CDS 32097 32531 . + 0 ID=cds-RJP83172.1;Parent=gene-C5O68_04280;Dbxref=NCBI_GP:RJP83172.1;Name=RJP83172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357970.1;locus_tag=C5O68_04280;product=MarR family transcriptional regulator;protein_id=RJP83172.1;transl_table=11 PTQV01000025.1 Genbank gene 32531 33505 . + . ID=gene-C5O68_04285;Name=C5O68_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04285 PTQV01000025.1 Protein Homology CDS 32531 33505 . + 0 ID=cds-RJP83173.1;Parent=gene-C5O68_04285;Dbxref=NCBI_GP:RJP83173.1;Name=RJP83173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357971.1;locus_tag=C5O68_04285;product=3-oxoacyl-ACP synthase III;protein_id=RJP83173.1;transl_table=11 PTQV01000025.1 Genbank gene 33565 33789 . + . ID=gene-C5O68_04290;Name=C5O68_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04290 PTQV01000025.1 Protein Homology CDS 33565 33789 . + 0 ID=cds-RJP83174.1;Parent=gene-C5O68_04290;Dbxref=NCBI_GP:RJP83174.1;Name=RJP83174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357972.1;locus_tag=C5O68_04290;product=acyl carrier protein;protein_id=RJP83174.1;transl_table=11 PTQV01000025.1 Genbank gene 33908 34882 . + . ID=gene-C5O68_04295;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=C5O68_04295 PTQV01000025.1 Protein Homology CDS 33908 34882 . + 0 ID=cds-RJP83175.1;Parent=gene-C5O68_04295;Dbxref=NCBI_GP:RJP83175.1;Name=RJP83175.1;gbkey=CDS;gene=fabK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357973.1;locus_tag=C5O68_04295;product=enoyl-[acyl-carrier-protein] reductase FabK;protein_id=RJP83175.1;transl_table=11 PTQV01000025.1 Genbank gene 34875 35795 . + . ID=gene-C5O68_04300;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=C5O68_04300 PTQV01000025.1 Protein Homology CDS 34875 35795 . + 0 ID=cds-RJP83176.1;Parent=gene-C5O68_04300;Dbxref=NCBI_GP:RJP83176.1;Name=RJP83176.1;gbkey=CDS;gene=fabD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357974.1;locus_tag=C5O68_04300;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=RJP83176.1;transl_table=11 PTQV01000025.1 Genbank gene 35829 36560 . + . ID=gene-C5O68_04305;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=C5O68_04305 PTQV01000025.1 Protein Homology CDS 35829 36560 . + 0 ID=cds-RJP83177.1;Parent=gene-C5O68_04305;Dbxref=NCBI_GP:RJP83177.1;Name=RJP83177.1;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357975.1;locus_tag=C5O68_04305;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=RJP83177.1;transl_table=11 PTQV01000025.1 Genbank gene 36582 37817 . + . ID=gene-C5O68_04310;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=C5O68_04310 PTQV01000025.1 Protein Homology CDS 36582 37817 . + 0 ID=cds-RJP83178.1;Parent=gene-C5O68_04310;Dbxref=NCBI_GP:RJP83178.1;Name=RJP83178.1;gbkey=CDS;gene=fabF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446781.1;locus_tag=C5O68_04310;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=RJP83178.1;transl_table=11 PTQV01000025.1 Genbank gene 37820 38305 . + . ID=gene-C5O68_04315;Name=C5O68_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04315 PTQV01000025.1 Protein Homology CDS 37820 38305 . + 0 ID=cds-RJP83179.1;Parent=gene-C5O68_04315;Dbxref=NCBI_GP:RJP83179.1;Name=RJP83179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357977.1;locus_tag=C5O68_04315;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=RJP83179.1;transl_table=11 PTQV01000025.1 Genbank gene 38302 38724 . + . ID=gene-C5O68_04320;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=C5O68_04320 PTQV01000025.1 Protein Homology CDS 38302 38724 . + 0 ID=cds-RJP83180.1;Parent=gene-C5O68_04320;Dbxref=NCBI_GP:RJP83180.1;Name=RJP83180.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357978.1;locus_tag=C5O68_04320;product=beta-hydroxyacyl-ACP dehydratase;protein_id=RJP83180.1;transl_table=11 PTQV01000025.1 Genbank gene 38736 40103 . + . ID=gene-C5O68_04325;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=C5O68_04325 PTQV01000025.1 Protein Homology CDS 38736 40103 . + 0 ID=cds-RJP83181.1;Parent=gene-C5O68_04325;Dbxref=NCBI_GP:RJP83181.1;Name=RJP83181.1;gbkey=CDS;gene=accC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357979.1;locus_tag=C5O68_04325;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=RJP83181.1;transl_table=11 PTQV01000025.1 Genbank gene 40140 41006 . + . ID=gene-C5O68_04330;Name=C5O68_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04330 PTQV01000025.1 Protein Homology CDS 40140 41006 . + 0 ID=cds-RJP83182.1;Parent=gene-C5O68_04330;Dbxref=NCBI_GP:RJP83182.1;Name=RJP83182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357980.1;locus_tag=C5O68_04330;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=RJP83182.1;transl_table=11 PTQV01000025.1 Genbank gene 41003 41770 . + . ID=gene-C5O68_04335;Name=C5O68_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04335 PTQV01000025.1 Protein Homology CDS 41003 41770 . + 0 ID=cds-RJP83183.1;Parent=gene-C5O68_04335;Dbxref=NCBI_GP:RJP83183.1;Name=RJP83183.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein%3B these proteins present a shorter N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357981.1;locus_tag=C5O68_04335;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=RJP83183.1;transl_table=11 PTQV01000025.1 Genbank gene 41884 42309 . - . ID=gene-C5O68_04340;Name=C5O68_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04340 PTQV01000025.1 Protein Homology CDS 41884 42309 . - 0 ID=cds-RJP83184.1;Parent=gene-C5O68_04340;Dbxref=NCBI_GP:RJP83184.1;Name=RJP83184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203629.1;locus_tag=C5O68_04340;product=transcription antitermination factor NusB;protein_id=RJP83184.1;transl_table=11 PTQV01000025.1 Genbank gene 42302 42691 . - . ID=gene-C5O68_04345;Name=C5O68_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04345 PTQV01000025.1 Protein Homology CDS 42302 42691 . - 0 ID=cds-RJP83185.1;Parent=gene-C5O68_04345;Dbxref=NCBI_GP:RJP83185.1;Name=RJP83185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446772.1;locus_tag=C5O68_04345;product=Asp23/Gls24 family envelope stress response protein;protein_id=RJP83185.1;transl_table=11 PTQV01000025.1 Genbank gene 42713 43273 . - . ID=gene-C5O68_04350;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=C5O68_04350 PTQV01000025.1 Protein Homology CDS 42713 43273 . - 0 ID=cds-RJP83186.1;Parent=gene-C5O68_04350;Dbxref=NCBI_GP:RJP83186.1;Name=RJP83186.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568636.1;locus_tag=C5O68_04350;product=elongation factor P;protein_id=RJP83186.1;transl_table=11 PTQV01000025.1 Genbank gene 43404 44846 . - . ID=gene-C5O68_04355;Name=C5O68_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04355 PTQV01000025.1 Protein Homology CDS 43404 44846 . - 0 ID=cds-RJP83187.1;Parent=gene-C5O68_04355;Dbxref=NCBI_GP:RJP83187.1;Name=RJP83187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357987.1;locus_tag=C5O68_04355;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B;protein_id=RJP83187.1;transl_table=11 PTQV01000025.1 Genbank gene 44846 46312 . - . ID=gene-C5O68_04360;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=C5O68_04360 PTQV01000025.1 Protein Homology CDS 44846 46312 . - 0 ID=cds-RJP83188.1;Parent=gene-C5O68_04360;Dbxref=NCBI_GP:RJP83188.1;Name=RJP83188.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357988.1;locus_tag=C5O68_04360;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=RJP83188.1;transl_table=11 PTQV01000025.1 Genbank gene 46312 46614 . - . ID=gene-C5O68_04365;Name=C5O68_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04365 PTQV01000025.1 Protein Homology CDS 46312 46614 . - 0 ID=cds-RJP83189.1;Parent=gene-C5O68_04365;Dbxref=NCBI_GP:RJP83189.1;Name=RJP83189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357989.1;locus_tag=C5O68_04365;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C;protein_id=RJP83189.1;transl_table=11 PTQV01000025.1 Genbank gene 46827 48371 . + . ID=gene-C5O68_04370;Name=C5O68_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04370 PTQV01000025.1 Protein Homology CDS 46827 48371 . + 0 ID=cds-RJP83190.1;Parent=gene-C5O68_04370;Dbxref=NCBI_GP:RJP83190.1;Name=RJP83190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011681503.1;locus_tag=C5O68_04370;product=peptide chain release factor 3;protein_id=RJP83190.1;transl_table=11 PTQV01000025.1 Genbank gene 49125 49322 . + . ID=gene-C5O68_04375;Name=C5O68_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04375 PTQV01000025.1 Protein Homology CDS 49125 49322 . + 0 ID=cds-RJP83191.1;Parent=gene-C5O68_04375;Dbxref=NCBI_GP:RJP83191.1;Name=RJP83191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808887.1;locus_tag=C5O68_04375;product=glycosyl transferase family 8;protein_id=RJP83191.1;transl_table=11 PTQV01000025.1 Genbank gene 49397 49609 . + . ID=gene-C5O68_04380;Name=C5O68_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04380 PTQV01000025.1 Protein Homology CDS 49397 49609 . + 0 ID=cds-RJP83192.1;Parent=gene-C5O68_04380;Dbxref=NCBI_GP:RJP83192.1;Name=RJP83192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001858191.1;locus_tag=C5O68_04380;product=glycosyl transferase family 8;protein_id=RJP83192.1;transl_table=11 PTQV01000025.1 Genbank pseudogene 49636 49776 . - . ID=gene-C5O68_04385;Name=C5O68_04385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04385;pseudo=true PTQV01000025.1 Protein Homology CDS 49636 49776 . - 0 ID=cds-C5O68_04385;Parent=gene-C5O68_04385;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=C5O68_04385;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000157.1 1 939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000157.1 Genbank region 1 939 . + . ID=PTQV01000157.1:1..939;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000157.1 Genbank gene 1 862 . - . ID=gene-C5O68_12865;Name=C5O68_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_12865;partial=true;start_range=.,1 PTQV01000157.1 Protein Homology CDS 1 862 . - 0 ID=cds-RJP75896.1;Parent=gene-C5O68_12865;Dbxref=NCBI_GP:RJP75896.1;Name=RJP75896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446502.1;locus_tag=C5O68_12865;partial=true;product=methionine adenosyltransferase;protein_id=RJP75896.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000026.1 1 44497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000026.1 Genbank region 1 44497 . + . ID=PTQV01000026.1:1..44497;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000026.1 Genbank pseudogene 148 219 . - . ID=gene-C5O68_04390;Name=C5O68_04390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04390;pseudo=true PTQV01000026.1 Protein Homology CDS 148 219 . - 0 ID=cds-C5O68_04390;Parent=gene-C5O68_04390;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692801.1;locus_tag=C5O68_04390;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000026.1 Genbank gene 257 886 . - . ID=gene-C5O68_04395;Name=C5O68_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04395 PTQV01000026.1 Protein Homology CDS 257 886 . - 0 ID=cds-RJP83006.1;Parent=gene-C5O68_04395;Dbxref=NCBI_GP:RJP83006.1;Name=RJP83006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690864.1;locus_tag=C5O68_04395;product=MBL fold metallo-hydrolase;protein_id=RJP83006.1;transl_table=11 PTQV01000026.1 Genbank gene 1013 1273 . - . ID=gene-C5O68_04400;Name=C5O68_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04400 PTQV01000026.1 Protein Homology CDS 1013 1273 . - 0 ID=cds-RJP83007.1;Parent=gene-C5O68_04400;Dbxref=NCBI_GP:RJP83007.1;Name=RJP83007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445758.1;locus_tag=C5O68_04400;product=hypothetical protein;protein_id=RJP83007.1;transl_table=11 PTQV01000026.1 Genbank pseudogene 1494 1559 . - . ID=gene-C5O68_04405;Name=C5O68_04405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04405;pseudo=true PTQV01000026.1 Protein Homology CDS 1494 1559 . - 0 ID=cds-C5O68_04405;Parent=gene-C5O68_04405;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=C5O68_04405;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000026.1 Genbank gene 1850 4072 . + . ID=gene-C5O68_04410;Name=C5O68_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04410 PTQV01000026.1 Protein Homology CDS 1850 4072 . + 0 ID=cds-RJP83008.1;Parent=gene-C5O68_04410;Dbxref=NCBI_GP:RJP83008.1;Name=RJP83008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359080.1;locus_tag=C5O68_04410;product=GTP pyrophosphokinase;protein_id=RJP83008.1;transl_table=11 PTQV01000026.1 Genbank gene 4102 4545 . + . ID=gene-C5O68_04415;Name=C5O68_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04415 PTQV01000026.1 Protein Homology CDS 4102 4545 . + 0 ID=cds-RJP83009.1;Parent=gene-C5O68_04415;Dbxref=NCBI_GP:RJP83009.1;Name=RJP83009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445760.1;locus_tag=C5O68_04415;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=RJP83009.1;transl_table=11 PTQV01000026.1 Genbank gene 4577 4942 . - . ID=gene-C5O68_04420;Name=C5O68_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04420 PTQV01000026.1 Protein Homology CDS 4577 4942 . - 0 ID=cds-RJP83010.1;Parent=gene-C5O68_04420;Dbxref=NCBI_GP:RJP83010.1;Name=RJP83010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014307.1;locus_tag=C5O68_04420;product=hypothetical protein;protein_id=RJP83010.1;transl_table=11 PTQV01000026.1 Genbank gene 5160 5810 . - . ID=gene-C5O68_04425;Name=C5O68_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04425 PTQV01000026.1 Protein Homology CDS 5160 5810 . - 0 ID=cds-RJP83011.1;Parent=gene-C5O68_04425;Dbxref=NCBI_GP:RJP83011.1;Name=RJP83011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359073.1;locus_tag=C5O68_04425;product=MarR family transcriptional regulator;protein_id=RJP83011.1;transl_table=11 PTQV01000026.1 Genbank gene 5916 6764 . + . ID=gene-C5O68_04430;Name=C5O68_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04430 PTQV01000026.1 Protein Homology CDS 5916 6764 . + 0 ID=cds-RJP83012.1;Parent=gene-C5O68_04430;Dbxref=NCBI_GP:RJP83012.1;Name=RJP83012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445763.1;locus_tag=C5O68_04430;product=metallophosphoesterase;protein_id=RJP83012.1;transl_table=11 PTQV01000026.1 Genbank gene 6840 7277 . + . ID=gene-C5O68_04435;Name=C5O68_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04435 PTQV01000026.1 Protein Homology CDS 6840 7277 . + 0 ID=cds-RJP83013.1;Parent=gene-C5O68_04435;Dbxref=NCBI_GP:RJP83013.1;Name=RJP83013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445764.1;locus_tag=C5O68_04435;product=Rrf2 family transcriptional regulator;protein_id=RJP83013.1;transl_table=11 PTQV01000026.1 Genbank gene 7485 8558 . - . ID=gene-C5O68_04440;Name=C5O68_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04440 PTQV01000026.1 Protein Homology CDS 7485 8558 . - 0 ID=cds-RJP83014.1;Parent=gene-C5O68_04440;Dbxref=NCBI_GP:RJP83014.1;Name=RJP83014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359068.1;locus_tag=C5O68_04440;product=alpha/beta hydrolase;protein_id=RJP83014.1;transl_table=11 PTQV01000026.1 Genbank gene 8714 9391 . + . ID=gene-C5O68_04445;Name=C5O68_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04445 PTQV01000026.1 Protein Homology CDS 8714 9391 . + 0 ID=cds-RJP83015.1;Parent=gene-C5O68_04445;Dbxref=NCBI_GP:RJP83015.1;Name=RJP83015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445766.1;locus_tag=C5O68_04445;product=DNA-binding response regulator;protein_id=RJP83015.1;transl_table=11 PTQV01000026.1 Genbank gene 9384 10358 . + . ID=gene-C5O68_04450;Name=C5O68_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04450 PTQV01000026.1 Protein Homology CDS 9384 10358 . + 0 ID=cds-RJP83016.1;Parent=gene-C5O68_04450;Dbxref=NCBI_GP:RJP83016.1;Name=RJP83016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445767.1;locus_tag=C5O68_04450;product=sensor histidine kinase;protein_id=RJP83016.1;transl_table=11 PTQV01000026.1 Genbank gene 10405 12348 . - . ID=gene-C5O68_04455;Name=C5O68_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04455 PTQV01000026.1 Protein Homology CDS 10405 12348 . - 0 ID=cds-RJP83017.1;Parent=gene-C5O68_04455;Dbxref=NCBI_GP:RJP83017.1;Name=RJP83017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359065.2;locus_tag=C5O68_04455;product=threonine--tRNA ligase;protein_id=RJP83017.1;transl_table=11 PTQV01000026.1 Genbank pseudogene 12501 12729 . - . ID=gene-C5O68_04460;Name=C5O68_04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04460;pseudo=true PTQV01000026.1 Protein Homology CDS 12501 12729 . - 0 ID=cds-C5O68_04460;Parent=gene-C5O68_04460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002944050.1;locus_tag=C5O68_04460;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000026.1 Genbank pseudogene 12749 12846 . - . ID=gene-C5O68_04465;Name=C5O68_04465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04465;pseudo=true PTQV01000026.1 Protein Homology CDS 12749 12846 . - 0 ID=cds-C5O68_04465;Parent=gene-C5O68_04465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035512.1;locus_tag=C5O68_04465;product=AAA family ATPase;pseudo=true;transl_table=11 PTQV01000026.1 Genbank pseudogene 12986 13098 . - . ID=gene-C5O68_04470;Name=C5O68_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04470;pseudo=true PTQV01000026.1 Protein Homology CDS 12986 13098 . - 0 ID=cds-C5O68_04470;Parent=gene-C5O68_04470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445771.1;locus_tag=C5O68_04470;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000026.1 Genbank gene 13550 13819 . + . ID=gene-C5O68_04475;Name=C5O68_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04475 PTQV01000026.1 Protein Homology CDS 13550 13819 . + 0 ID=cds-RJP83018.1;Parent=gene-C5O68_04475;Dbxref=NCBI_GP:RJP83018.1;Name=RJP83018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018251.1;locus_tag=C5O68_04475;product=30S ribosomal protein S15;protein_id=RJP83018.1;transl_table=11 PTQV01000026.1 Genbank gene 14634 15248 . + . ID=gene-C5O68_04480;Name=C5O68_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04480 PTQV01000026.1 Protein Homology CDS 14634 15248 . + 0 ID=cds-RJP83019.1;Parent=gene-C5O68_04480;Dbxref=NCBI_GP:RJP83019.1;Name=RJP83019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359059.1;locus_tag=C5O68_04480;product=cadmium resistance protein CadD;protein_id=RJP83019.1;transl_table=11 PTQV01000026.1 Genbank gene 15540 16289 . - . ID=gene-C5O68_04485;Name=C5O68_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04485 PTQV01000026.1 Protein Homology CDS 15540 16289 . - 0 ID=cds-RJP83020.1;Parent=gene-C5O68_04485;Dbxref=NCBI_GP:RJP83020.1;Name=RJP83020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500208.1;locus_tag=C5O68_04485;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RJP83020.1;transl_table=11 PTQV01000026.1 Genbank gene 16422 18758 . + . ID=gene-C5O68_04490;Name=C5O68_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04490 PTQV01000026.1 Protein Homology CDS 16422 18758 . + 0 ID=cds-RJP83044.1;Parent=gene-C5O68_04490;Dbxref=NCBI_GP:RJP83044.1;Name=RJP83044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359057.1;locus_tag=C5O68_04490;product=ATPase;protein_id=RJP83044.1;transl_table=11 PTQV01000026.1 Genbank gene 18936 19025 . + . ID=gene-C5O68_04495;Name=C5O68_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04495 PTQV01000026.1 Protein Homology CDS 18936 19025 . + 0 ID=cds-RJP83045.1;Parent=gene-C5O68_04495;Dbxref=NCBI_GP:RJP83045.1;Name=RJP83045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001824422.1;locus_tag=C5O68_04495;product=DNA alkylation repair protein;protein_id=RJP83045.1;transl_table=11 PTQV01000026.1 Genbank gene 19192 22314 . - . ID=gene-C5O68_04500;Name=C5O68_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04500 PTQV01000026.1 Protein Homology CDS 19192 22314 . - 0 ID=cds-RJP83021.1;Parent=gene-C5O68_04500;Dbxref=NCBI_GP:RJP83021.1;Name=RJP83021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828348.1;locus_tag=C5O68_04500;product=helicase;protein_id=RJP83021.1;transl_table=11 PTQV01000026.1 Genbank pseudogene 22527 23765 . - . ID=gene-C5O68_04505;Name=C5O68_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04505;pseudo=true PTQV01000026.1 Protein Homology CDS 22527 23765 . - 0 ID=cds-C5O68_04505;Parent=gene-C5O68_04505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397624.1;locus_tag=C5O68_04505;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000026.1 Genbank gene 24112 24789 . + . ID=gene-C5O68_04510;Name=C5O68_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04510 PTQV01000026.1 Protein Homology CDS 24112 24789 . + 0 ID=cds-RJP83022.1;Parent=gene-C5O68_04510;Dbxref=NCBI_GP:RJP83022.1;Name=RJP83022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359056.1;locus_tag=C5O68_04510;product=tRNA (adenine-N(1))-methyltransferase;protein_id=RJP83022.1;transl_table=11 PTQV01000026.1 Genbank gene 24776 25573 . + . ID=gene-C5O68_04515;Name=C5O68_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04515 PTQV01000026.1 Protein Homology CDS 24776 25573 . + 0 ID=cds-RJP83023.1;Parent=gene-C5O68_04515;Dbxref=NCBI_GP:RJP83023.1;Name=RJP83023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445782.1;locus_tag=C5O68_04515;product=Nif3-like dinuclear metal center hexameric protein;protein_id=RJP83023.1;transl_table=11 PTQV01000026.1 Genbank gene 25581 26693 . + . ID=gene-C5O68_04520;Name=C5O68_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04520 PTQV01000026.1 Protein Homology CDS 25581 26693 . + 0 ID=cds-RJP83024.1;Parent=gene-C5O68_04520;Dbxref=NCBI_GP:RJP83024.1;Name=RJP83024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359054.1;locus_tag=C5O68_04520;product=FAD-dependent oxidoreductase;protein_id=RJP83024.1;transl_table=11 PTQV01000026.1 Genbank gene 26793 27812 . + . ID=gene-C5O68_04525;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C5O68_04525 PTQV01000026.1 Protein Homology CDS 26793 27812 . + 0 ID=cds-RJP83025.1;Parent=gene-C5O68_04525;Dbxref=NCBI_GP:RJP83025.1;Name=RJP83025.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445785.1;locus_tag=C5O68_04525;product=UDP-glucose 4-epimerase GalE;protein_id=RJP83025.1;transl_table=11 PTQV01000026.1 Genbank gene 27814 28779 . + . ID=gene-C5O68_04530;Name=C5O68_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04530 PTQV01000026.1 Protein Homology CDS 27814 28779 . + 0 ID=cds-RJP83026.1;Parent=gene-C5O68_04530;Dbxref=NCBI_GP:RJP83026.1;Name=RJP83026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445786.1;locus_tag=C5O68_04530;product=glycosyltransferase;protein_id=RJP83026.1;transl_table=11 PTQV01000026.1 Genbank gene 28830 29108 . - . ID=gene-C5O68_04535;Name=C5O68_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04535 PTQV01000026.1 Protein Homology CDS 28830 29108 . - 0 ID=cds-RJP83046.1;Parent=gene-C5O68_04535;Dbxref=NCBI_GP:RJP83046.1;Name=RJP83046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359051.1;locus_tag=C5O68_04535;product=ferredoxin;protein_id=RJP83046.1;transl_table=11 PTQV01000026.1 Genbank gene 29088 29564 . + . ID=gene-C5O68_04540;Name=C5O68_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04540 PTQV01000026.1 Protein Homology CDS 29088 29564 . + 0 ID=cds-RJP83027.1;Parent=gene-C5O68_04540;Dbxref=NCBI_GP:RJP83027.1;Name=RJP83027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359050.1;locus_tag=C5O68_04540;product=hypothetical protein;protein_id=RJP83027.1;transl_table=11 PTQV01000026.1 Genbank gene 29573 30244 . + . ID=gene-C5O68_04545;Name=C5O68_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04545 PTQV01000026.1 Protein Homology CDS 29573 30244 . + 0 ID=cds-RJP83028.1;Parent=gene-C5O68_04545;Dbxref=NCBI_GP:RJP83028.1;Name=RJP83028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359049.1;locus_tag=C5O68_04545;product=(d)CMP kinase;protein_id=RJP83028.1;transl_table=11 PTQV01000026.1 Genbank gene 30375 30713 . + . ID=gene-C5O68_04550;Name=C5O68_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04550 PTQV01000026.1 Protein Homology CDS 30375 30713 . + 0 ID=cds-RJP83029.1;Parent=gene-C5O68_04550;Dbxref=NCBI_GP:RJP83029.1;Name=RJP83029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359048.1;locus_tag=C5O68_04550;product=protein PhnA;protein_id=RJP83029.1;transl_table=11 PTQV01000026.1 Genbank gene 30716 31345 . + . ID=gene-C5O68_04555;Name=C5O68_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04555 PTQV01000026.1 Protein Homology CDS 30716 31345 . + 0 ID=cds-RJP83030.1;Parent=gene-C5O68_04555;Dbxref=NCBI_GP:RJP83030.1;Name=RJP83030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033949.1;locus_tag=C5O68_04555;product=hypothetical protein;protein_id=RJP83030.1;transl_table=11 PTQV01000026.1 Genbank gene 31668 32819 . + . ID=gene-C5O68_04560;Name=C5O68_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04560 PTQV01000026.1 Protein Homology CDS 31668 32819 . + 0 ID=cds-RJP83031.1;Parent=gene-C5O68_04560;Dbxref=NCBI_GP:RJP83031.1;Name=RJP83031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359046.1;locus_tag=C5O68_04560;product=MFS transporter;protein_id=RJP83031.1;transl_table=11 PTQV01000026.1 Genbank gene 32791 32952 . - . ID=gene-C5O68_04565;Name=C5O68_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04565 PTQV01000026.1 Protein Homology CDS 32791 32952 . - 0 ID=cds-RJP83032.1;Parent=gene-C5O68_04565;Dbxref=NCBI_GP:RJP83032.1;Name=RJP83032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809593.1;locus_tag=C5O68_04565;product=cytidylate kinase;protein_id=RJP83032.1;transl_table=11 PTQV01000026.1 Genbank gene 33132 33881 . + . ID=gene-C5O68_04570;Name=C5O68_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04570 PTQV01000026.1 Protein Homology CDS 33132 33881 . + 0 ID=cds-RJP83033.1;Parent=gene-C5O68_04570;Dbxref=NCBI_GP:RJP83033.1;Name=RJP83033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359044.1;locus_tag=C5O68_04570;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=RJP83033.1;transl_table=11 PTQV01000026.1 Genbank gene 33871 34644 . + . ID=gene-C5O68_04575;Name=C5O68_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04575 PTQV01000026.1 Protein Homology CDS 33871 34644 . + 0 ID=cds-RJP83034.1;Parent=gene-C5O68_04575;Dbxref=NCBI_GP:RJP83034.1;Name=RJP83034.1;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445794.1;locus_tag=C5O68_04575;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=RJP83034.1;transl_table=11 PTQV01000026.1 Genbank gene 34622 35083 . + . ID=gene-C5O68_04580;Name=C5O68_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04580 PTQV01000026.1 Protein Homology CDS 34622 35083 . + 0 ID=cds-RJP83035.1;Parent=gene-C5O68_04580;Dbxref=NCBI_GP:RJP83035.1;Name=RJP83035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445795.1;locus_tag=C5O68_04580;product=ECF transporter S component;protein_id=RJP83035.1;transl_table=11 PTQV01000026.1 Genbank pseudogene 35231 35705 . - . ID=gene-C5O68_04585;Name=C5O68_04585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04585;pseudo=true PTQV01000026.1 Protein Homology CDS 35231 35705 . - 0 ID=cds-C5O68_04585;Parent=gene-C5O68_04585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155488.1;locus_tag=C5O68_04585;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000026.1 Genbank gene 35754 36476 . - . ID=gene-C5O68_04590;Name=C5O68_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04590 PTQV01000026.1 Protein Homology CDS 35754 36476 . - 0 ID=cds-RJP83036.1;Parent=gene-C5O68_04590;Dbxref=NCBI_GP:RJP83036.1;Name=RJP83036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017479.1;locus_tag=C5O68_04590;product=ABC transporter permease;protein_id=RJP83036.1;transl_table=11 PTQV01000026.1 Genbank gene 36478 37389 . - . ID=gene-C5O68_04595;Name=C5O68_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04595 PTQV01000026.1 Protein Homology CDS 36478 37389 . - 0 ID=cds-RJP83037.1;Parent=gene-C5O68_04595;Dbxref=NCBI_GP:RJP83037.1;Name=RJP83037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197224.1;locus_tag=C5O68_04595;product=ABC transporter ATP-binding protein;protein_id=RJP83037.1;transl_table=11 PTQV01000026.1 Genbank gene 37386 38519 . - . ID=gene-C5O68_04600;Name=C5O68_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04600 PTQV01000026.1 Protein Homology CDS 37386 38519 . - 0 ID=cds-RJP83038.1;Parent=gene-C5O68_04600;Dbxref=NCBI_GP:RJP83038.1;Name=RJP83038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014727367.1;locus_tag=C5O68_04600;product=molybdopterin biosynthesis protein MoeB;protein_id=RJP83038.1;transl_table=11 PTQV01000026.1 Genbank gene 38960 39667 . + . ID=gene-C5O68_04605;Name=C5O68_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04605 PTQV01000026.1 Protein Homology CDS 38960 39667 . + 0 ID=cds-RJP83039.1;Parent=gene-C5O68_04605;Dbxref=NCBI_GP:RJP83039.1;Name=RJP83039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950056.1;locus_tag=C5O68_04605;product=DNA-binding response regulator;protein_id=RJP83039.1;transl_table=11 PTQV01000026.1 Genbank gene 39667 40935 . + . ID=gene-C5O68_04610;Name=C5O68_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04610 PTQV01000026.1 Protein Homology CDS 39667 40935 . + 0 ID=cds-RJP83040.1;Parent=gene-C5O68_04610;Dbxref=NCBI_GP:RJP83040.1;Name=RJP83040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961371.1;locus_tag=C5O68_04610;product=GHKL domain-containing protein;protein_id=RJP83040.1;transl_table=11 PTQV01000026.1 Genbank gene 40954 42036 . - . ID=gene-C5O68_04615;Name=C5O68_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04615 PTQV01000026.1 Protein Homology CDS 40954 42036 . - 0 ID=cds-RJP83041.1;Parent=gene-C5O68_04615;Dbxref=NCBI_GP:RJP83041.1;Name=RJP83041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445796.1;locus_tag=C5O68_04615;product=aminopeptidase P family protein;protein_id=RJP83041.1;transl_table=11 PTQV01000026.1 Genbank gene 42163 42945 . - . ID=gene-C5O68_04620;Name=C5O68_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04620 PTQV01000026.1 Protein Homology CDS 42163 42945 . - 0 ID=cds-RJP83042.1;Parent=gene-C5O68_04620;Dbxref=NCBI_GP:RJP83042.1;Name=RJP83042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359037.1;locus_tag=C5O68_04620;product=glutamine amidotransferase;protein_id=RJP83042.1;transl_table=11 PTQV01000026.1 Genbank gene 42945 44288 . - . ID=gene-C5O68_04625;Name=C5O68_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04625 PTQV01000026.1 Protein Homology CDS 42945 44288 . - 0 ID=cds-RJP83043.1;Parent=gene-C5O68_04625;Dbxref=NCBI_GP:RJP83043.1;Name=RJP83043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445798.1;locus_tag=C5O68_04625;product=DUF1727 domain-containing protein;protein_id=RJP83043.1;transl_table=11 PTQV01000026.1 Genbank pseudogene 44362 44439 . - . ID=gene-C5O68_04630;Name=C5O68_04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04630;pseudo=true PTQV01000026.1 Protein Homology CDS 44362 44439 . - 0 ID=cds-C5O68_04630;Parent=gene-C5O68_04630;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_04630;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region PTQV01000027.1 1 16930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000027.1 Genbank region 1 16930 . + . ID=PTQV01000027.1:1..16930;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000027.1 Genbank gene 1 2464 . - . ID=gene-C5O68_04635;Name=C5O68_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04635;partial=true;start_range=.,1 PTQV01000027.1 Protein Homology CDS 1 2464 . - 0 ID=cds-RJP82972.1;Parent=gene-C5O68_04635;Dbxref=NCBI_GP:RJP82972.1;Name=RJP82972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000639853.1;locus_tag=C5O68_04635;partial=true;product=hypothetical protein;protein_id=RJP82972.1;start_range=.,1;transl_table=11 PTQV01000027.1 Genbank gene 2461 3159 . - . ID=gene-C5O68_04640;Name=C5O68_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04640 PTQV01000027.1 Protein Homology CDS 2461 3159 . - 0 ID=cds-RJP82973.1;Parent=gene-C5O68_04640;Dbxref=NCBI_GP:RJP82973.1;Name=RJP82973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499602.1;locus_tag=C5O68_04640;product=phage tail protein;protein_id=RJP82973.1;transl_table=11 PTQV01000027.1 Genbank gene 3159 5570 . - . ID=gene-C5O68_04645;Name=C5O68_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04645 PTQV01000027.1 Protein Homology CDS 3159 5570 . - 0 ID=cds-RJP82974.1;Parent=gene-C5O68_04645;Dbxref=NCBI_GP:RJP82974.1;Name=RJP82974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000179967.1;locus_tag=C5O68_04645;product=PblA;protein_id=RJP82974.1;transl_table=11 PTQV01000027.1 Genbank gene 5570 5956 . - . ID=gene-C5O68_04650;Name=C5O68_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04650 PTQV01000027.1 Protein Homology CDS 5570 5956 . - 0 ID=cds-RJP82975.1;Parent=gene-C5O68_04650;Dbxref=NCBI_GP:RJP82975.1;Name=RJP82975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560880.1;locus_tag=C5O68_04650;product=hypothetical protein;protein_id=RJP82975.1;transl_table=11 PTQV01000027.1 Genbank gene 5968 6243 . - . ID=gene-C5O68_04655;Name=C5O68_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04655 PTQV01000027.1 Protein Homology CDS 5968 6243 . - 0 ID=cds-RJP82976.1;Parent=gene-C5O68_04655;Dbxref=NCBI_GP:RJP82976.1;Name=RJP82976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010050518.1;locus_tag=C5O68_04655;product=hypothetical protein;protein_id=RJP82976.1;transl_table=11 PTQV01000027.1 Genbank gene 6249 6806 . - . ID=gene-C5O68_04660;Name=C5O68_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04660 PTQV01000027.1 Protein Homology CDS 6249 6806 . - 0 ID=cds-RJP82991.1;Parent=gene-C5O68_04660;Dbxref=NCBI_GP:RJP82991.1;Name=RJP82991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010050515.1;locus_tag=C5O68_04660;product=phage tail protein;protein_id=RJP82991.1;transl_table=11 PTQV01000027.1 Genbank gene 6888 7223 . - . ID=gene-C5O68_04665;Name=C5O68_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04665 PTQV01000027.1 Protein Homology CDS 6888 7223 . - 0 ID=cds-RJP82977.1;Parent=gene-C5O68_04665;Dbxref=NCBI_GP:RJP82977.1;Name=RJP82977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251408.1;locus_tag=C5O68_04665;product=hypothetical protein;protein_id=RJP82977.1;transl_table=11 PTQV01000027.1 Genbank gene 7220 7456 . - . ID=gene-C5O68_04670;Name=C5O68_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04670 PTQV01000027.1 Protein Homology CDS 7220 7456 . - 0 ID=cds-RJP82978.1;Parent=gene-C5O68_04670;Dbxref=NCBI_GP:RJP82978.1;Name=RJP82978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069060.1;locus_tag=C5O68_04670;product=hypothetical protein;protein_id=RJP82978.1;transl_table=11 PTQV01000027.1 Genbank gene 7449 7787 . - . ID=gene-C5O68_04675;Name=C5O68_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04675 PTQV01000027.1 Protein Homology CDS 7449 7787 . - 0 ID=cds-RJP82979.1;Parent=gene-C5O68_04675;Dbxref=NCBI_GP:RJP82979.1;Name=RJP82979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767029.1;locus_tag=C5O68_04675;product=hypothetical protein;protein_id=RJP82979.1;transl_table=11 PTQV01000027.1 Genbank gene 7732 8172 . - . ID=gene-C5O68_04680;Name=C5O68_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04680 PTQV01000027.1 Protein Homology CDS 7732 8172 . - 0 ID=cds-RJP82980.1;Parent=gene-C5O68_04680;Dbxref=NCBI_GP:RJP82980.1;Name=RJP82980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863073.1;locus_tag=C5O68_04680;product=hypothetical protein;protein_id=RJP82980.1;transl_table=11 PTQV01000027.1 Genbank gene 8176 8388 . - . ID=gene-C5O68_04685;Name=C5O68_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04685 PTQV01000027.1 Protein Homology CDS 8176 8388 . - 0 ID=cds-RJP82981.1;Parent=gene-C5O68_04685;Dbxref=NCBI_GP:RJP82981.1;Name=RJP82981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240369.1;locus_tag=C5O68_04685;product=hypothetical protein;protein_id=RJP82981.1;transl_table=11 PTQV01000027.1 Genbank gene 8394 9290 . - . ID=gene-C5O68_04690;Name=C5O68_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04690 PTQV01000027.1 Protein Homology CDS 8394 9290 . - 0 ID=cds-RJP82982.1;Parent=gene-C5O68_04690;Dbxref=NCBI_GP:RJP82982.1;Name=RJP82982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251403.1;locus_tag=C5O68_04690;product=phage major capsid protein;protein_id=RJP82982.1;transl_table=11 PTQV01000027.1 Genbank gene 9296 9760 . - . ID=gene-C5O68_04695;Name=C5O68_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04695 PTQV01000027.1 Protein Homology CDS 9296 9760 . - 0 ID=cds-RJP82992.1;Parent=gene-C5O68_04695;Dbxref=NCBI_GP:RJP82992.1;Name=RJP82992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863070.1;locus_tag=C5O68_04695;product=phage scaffold protein;protein_id=RJP82992.1;transl_table=11 PTQV01000027.1 Genbank gene 9842 11254 . - . ID=gene-C5O68_04700;Name=C5O68_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04700 PTQV01000027.1 Protein Homology CDS 9842 11254 . - 0 ID=cds-RJP82983.1;Parent=gene-C5O68_04700;Dbxref=NCBI_GP:RJP82983.1;Name=RJP82983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251401.1;locus_tag=C5O68_04700;product=terminase;protein_id=RJP82983.1;transl_table=11 PTQV01000027.1 Genbank gene 11305 11535 . - . ID=gene-C5O68_04705;Name=C5O68_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04705 PTQV01000027.1 Protein Homology CDS 11305 11535 . - 0 ID=cds-RJP82984.1;Parent=gene-C5O68_04705;Dbxref=NCBI_GP:RJP82984.1;Name=RJP82984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528509.1;locus_tag=C5O68_04705;product=hypothetical protein;protein_id=RJP82984.1;transl_table=11 PTQV01000027.1 Genbank gene 11843 12070 . - . ID=gene-C5O68_04710;Name=C5O68_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04710 PTQV01000027.1 GeneMarkS+ CDS 11843 12070 . - 0 ID=cds-RJP82985.1;Parent=gene-C5O68_04710;Dbxref=NCBI_GP:RJP82985.1;Name=RJP82985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_04710;product=hypothetical protein;protein_id=RJP82985.1;transl_table=11 PTQV01000027.1 Genbank gene 12057 12272 . - . ID=gene-C5O68_04715;Name=C5O68_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04715 PTQV01000027.1 Protein Homology CDS 12057 12272 . - 0 ID=cds-RJP82986.1;Parent=gene-C5O68_04715;Dbxref=NCBI_GP:RJP82986.1;Name=RJP82986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001047598.1;locus_tag=C5O68_04715;product=hypothetical protein;protein_id=RJP82986.1;transl_table=11 PTQV01000027.1 Genbank gene 12272 13486 . - . ID=gene-C5O68_04720;Name=C5O68_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04720 PTQV01000027.1 Protein Homology CDS 12272 13486 . - 0 ID=cds-RJP82987.1;Parent=gene-C5O68_04720;Dbxref=NCBI_GP:RJP82987.1;Name=RJP82987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047513.1;locus_tag=C5O68_04720;product=hypothetical protein;protein_id=RJP82987.1;transl_table=11 PTQV01000027.1 Genbank gene 13440 14744 . - . ID=gene-C5O68_04725;Name=C5O68_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04725 PTQV01000027.1 Protein Homology CDS 13440 14744 . - 0 ID=cds-RJP82988.1;Parent=gene-C5O68_04725;Dbxref=NCBI_GP:RJP82988.1;Name=RJP82988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000172769.1;locus_tag=C5O68_04725;product=hypothetical protein;protein_id=RJP82988.1;transl_table=11 PTQV01000027.1 Genbank gene 14936 15280 . - . ID=gene-C5O68_04730;Name=C5O68_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04730 PTQV01000027.1 Protein Homology CDS 14936 15280 . - 0 ID=cds-RJP82993.1;Parent=gene-C5O68_04730;Dbxref=NCBI_GP:RJP82993.1;Name=RJP82993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015971728.1;locus_tag=C5O68_04730;product=HNH endonuclease;protein_id=RJP82993.1;transl_table=11 PTQV01000027.1 Genbank gene 15515 16081 . - . ID=gene-C5O68_04735;Name=C5O68_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04735 PTQV01000027.1 Protein Homology CDS 15515 16081 . - 0 ID=cds-RJP82989.1;Parent=gene-C5O68_04735;Dbxref=NCBI_GP:RJP82989.1;Name=RJP82989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754954.1;locus_tag=C5O68_04735;product=site-specific integrase;protein_id=RJP82989.1;transl_table=11 PTQV01000027.1 Genbank gene 16371 16799 . - . ID=gene-C5O68_04740;Name=C5O68_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04740 PTQV01000027.1 Protein Homology CDS 16371 16799 . - 0 ID=cds-RJP82990.1;Parent=gene-C5O68_04740;Dbxref=NCBI_GP:RJP82990.1;Name=RJP82990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=C5O68_04740;product=transcriptional regulator;protein_id=RJP82990.1;transl_table=11 ##sequence-region PTQV01000028.1 1 60851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000028.1 Genbank region 1 60851 . + . ID=PTQV01000028.1:1..60851;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000028.1 Genbank gene 1 8647 . - . ID=gene-C5O68_04745;Name=C5O68_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04745;partial=true;start_range=.,1 PTQV01000028.1 Protein Homology CDS 1 8647 . - 0 ID=cds-RJP82834.1;Parent=gene-C5O68_04745;Dbxref=NCBI_GP:RJP82834.1;Name=RJP82834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445925.1;locus_tag=C5O68_04745;partial=true;product=hypothetical protein;protein_id=RJP82834.1;start_range=.,1;transl_table=11 PTQV01000028.1 Genbank gene 8903 9346 . - . ID=gene-C5O68_04750;Name=C5O68_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04750 PTQV01000028.1 Protein Homology CDS 8903 9346 . - 0 ID=cds-RJP82835.1;Parent=gene-C5O68_04750;Dbxref=NCBI_GP:RJP82835.1;Name=RJP82835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02371.14;locus_tag=C5O68_04750;product=hypothetical protein;protein_id=RJP82835.1;transl_table=11 PTQV01000028.1 Genbank gene 9309 10070 . - . ID=gene-C5O68_04755;Name=C5O68_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04755 PTQV01000028.1 Protein Homology CDS 9309 10070 . - 0 ID=cds-RJP82836.1;Parent=gene-C5O68_04755;Dbxref=NCBI_GP:RJP82836.1;Name=RJP82836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01548.15;locus_tag=C5O68_04755;product=hypothetical protein;protein_id=RJP82836.1;transl_table=11 PTQV01000028.1 Genbank gene 10307 11197 . - . ID=gene-C5O68_04760;Name=C5O68_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04760 PTQV01000028.1 Protein Homology CDS 10307 11197 . - 0 ID=cds-RJP82837.1;Parent=gene-C5O68_04760;Dbxref=NCBI_GP:RJP82837.1;Name=RJP82837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218319.1;locus_tag=C5O68_04760;product=hypothetical protein;protein_id=RJP82837.1;transl_table=11 PTQV01000028.1 Genbank gene 11298 12986 . - . ID=gene-C5O68_04765;Name=C5O68_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04765 PTQV01000028.1 Protein Homology CDS 11298 12986 . - 0 ID=cds-RJP82838.1;Parent=gene-C5O68_04765;Dbxref=NCBI_GP:RJP82838.1;Name=RJP82838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251210.1;locus_tag=C5O68_04765;product=alpha-L-fucosidase;protein_id=RJP82838.1;transl_table=11 PTQV01000028.1 Genbank gene 12988 16776 . - . ID=gene-C5O68_04770;Name=C5O68_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04770 PTQV01000028.1 Protein Homology CDS 12988 16776 . - 0 ID=cds-RJP82839.1;Parent=gene-C5O68_04770;Dbxref=NCBI_GP:RJP82839.1;Name=RJP82839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250572.1;locus_tag=C5O68_04770;product=beta-galactosidase;protein_id=RJP82839.1;transl_table=11 PTQV01000028.1 Genbank gene 17014 21828 . - . ID=gene-C5O68_04775;Name=C5O68_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04775 PTQV01000028.1 Protein Homology CDS 17014 21828 . - 0 ID=cds-RJP82840.1;Parent=gene-C5O68_04775;Dbxref=NCBI_GP:RJP82840.1;Name=RJP82840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000657765.1;locus_tag=C5O68_04775;product=zinc metalloprotease;protein_id=RJP82840.1;transl_table=11 PTQV01000028.1 Genbank pseudogene 22115 22189 . - . ID=gene-C5O68_04780;Name=C5O68_04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04780;pseudo=true PTQV01000028.1 Protein Homology CDS 22115 22189 . - 0 ID=cds-C5O68_04780;Parent=gene-C5O68_04780;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_04780;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000028.1 Genbank gene 22273 23172 . - . ID=gene-C5O68_04785;Name=C5O68_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04785 PTQV01000028.1 Protein Homology CDS 22273 23172 . - 0 ID=cds-RJP82841.1;Parent=gene-C5O68_04785;Dbxref=NCBI_GP:RJP82841.1;Name=RJP82841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359553.1;locus_tag=C5O68_04785;product=SPFH domain-containing protein;protein_id=RJP82841.1;transl_table=11 PTQV01000028.1 Genbank pseudogene 23302 24452 . - . ID=gene-C5O68_04790;Name=C5O68_04790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04790;pseudo=true PTQV01000028.1 Protein Homology CDS 23302 24452 . - 0 ID=cds-C5O68_04790;Parent=gene-C5O68_04790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359554.1;locus_tag=C5O68_04790;product=lactaldehyde reductase;pseudo=true;transl_table=11 PTQV01000028.1 Genbank gene 24598 26364 . - . ID=gene-C5O68_04795;Name=C5O68_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04795 PTQV01000028.1 Protein Homology CDS 24598 26364 . - 0 ID=cds-RJP82842.1;Parent=gene-C5O68_04795;Dbxref=NCBI_GP:RJP82842.1;Name=RJP82842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359555.1;locus_tag=C5O68_04795;product=L-fucose isomerase;protein_id=RJP82842.1;transl_table=11 PTQV01000028.1 Genbank gene 26377 27105 . - . ID=gene-C5O68_04800;Name=C5O68_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04800 PTQV01000028.1 Protein Homology CDS 26377 27105 . - 0 ID=cds-RJP82843.1;Parent=gene-C5O68_04800;Dbxref=NCBI_GP:RJP82843.1;Name=RJP82843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076089.1;locus_tag=C5O68_04800;product=class II aldolase family protein;protein_id=RJP82843.1;transl_table=11 PTQV01000028.1 Genbank gene 27120 30137 . - . ID=gene-C5O68_04805;Name=C5O68_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04805 PTQV01000028.1 Protein Homology CDS 27120 30137 . - 0 ID=cds-RJP82844.1;Parent=gene-C5O68_04805;Dbxref=NCBI_GP:RJP82844.1;Name=RJP82844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813616.1;locus_tag=C5O68_04805;product=beta-galactosidase;protein_id=RJP82844.1;transl_table=11 PTQV01000028.1 Genbank gene 30151 32364 . - . ID=gene-C5O68_04810;Name=C5O68_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04810 PTQV01000028.1 Protein Homology CDS 30151 32364 . - 0 ID=cds-RJP82845.1;Parent=gene-C5O68_04810;Dbxref=NCBI_GP:RJP82845.1;Name=RJP82845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000158269.1;locus_tag=C5O68_04810;product=alpha-galactosidase;protein_id=RJP82845.1;transl_table=11 PTQV01000028.1 Genbank gene 32386 34257 . - . ID=gene-C5O68_04815;Name=C5O68_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04815 PTQV01000028.1 Protein Homology CDS 32386 34257 . - 0 ID=cds-RJP82846.1;Parent=gene-C5O68_04815;Dbxref=NCBI_GP:RJP82846.1;Name=RJP82846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863627.1;locus_tag=C5O68_04815;product=alpha-N-acetylgalactosaminidase;protein_id=RJP82846.1;transl_table=11 PTQV01000028.1 Genbank gene 34263 35582 . - . ID=gene-C5O68_04820;Name=C5O68_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04820 PTQV01000028.1 Protein Homology CDS 34263 35582 . - 0 ID=cds-RJP82847.1;Parent=gene-C5O68_04820;Dbxref=NCBI_GP:RJP82847.1;Name=RJP82847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683274.1;locus_tag=C5O68_04820;product=alpha-L-fucosidase;protein_id=RJP82847.1;transl_table=11 PTQV01000028.1 Genbank gene 35579 36418 . - . ID=gene-C5O68_04825;Name=C5O68_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04825 PTQV01000028.1 Protein Homology CDS 35579 36418 . - 0 ID=cds-RJP82848.1;Parent=gene-C5O68_04825;Dbxref=NCBI_GP:RJP82848.1;Name=RJP82848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001819555.1;locus_tag=C5O68_04825;product=carbohydrate ABC transporter permease;protein_id=RJP82848.1;transl_table=11 PTQV01000028.1 Genbank gene 36421 37350 . - . ID=gene-C5O68_04830;Name=C5O68_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04830 PTQV01000028.1 Protein Homology CDS 36421 37350 . - 0 ID=cds-RJP82849.1;Parent=gene-C5O68_04830;Dbxref=NCBI_GP:RJP82849.1;Name=RJP82849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057514.1;locus_tag=C5O68_04830;product=sugar ABC transporter permease;protein_id=RJP82849.1;transl_table=11 PTQV01000028.1 Genbank gene 37437 38729 . - . ID=gene-C5O68_04835;Name=C5O68_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04835 PTQV01000028.1 Protein Homology CDS 37437 38729 . - 0 ID=cds-RJP82850.1;Parent=gene-C5O68_04835;Dbxref=NCBI_GP:RJP82850.1;Name=RJP82850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036440.1;locus_tag=C5O68_04835;product=carbohydrate ABC transporter substrate-binding protein;protein_id=RJP82850.1;transl_table=11 PTQV01000028.1 Genbank gene 38758 40161 . - . ID=gene-C5O68_04840;Name=C5O68_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04840 PTQV01000028.1 Protein Homology CDS 38758 40161 . - 0 ID=cds-RJP82851.1;Parent=gene-C5O68_04840;Dbxref=NCBI_GP:RJP82851.1;Name=RJP82851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000388529.1;locus_tag=C5O68_04840;product=rhamnulokinase;protein_id=RJP82851.1;transl_table=11 PTQV01000028.1 Genbank gene 40337 41110 . + . ID=gene-C5O68_04845;Name=C5O68_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04845 PTQV01000028.1 Protein Homology CDS 40337 41110 . + 0 ID=cds-RJP82852.1;Parent=gene-C5O68_04845;Dbxref=NCBI_GP:RJP82852.1;Name=RJP82852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359565.1;locus_tag=C5O68_04845;product=DeoR/GlpR transcriptional regulator;protein_id=RJP82852.1;transl_table=11 PTQV01000028.1 Genbank gene 42381 43346 . - . ID=gene-C5O68_04850;Name=C5O68_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04850 PTQV01000028.1 Protein Homology CDS 42381 43346 . - 0 ID=cds-RJP82853.1;Parent=gene-C5O68_04850;Dbxref=NCBI_GP:RJP82853.1;Name=RJP82853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429453.1;locus_tag=C5O68_04850;product=DUF3644 domain-containing protein;protein_id=RJP82853.1;transl_table=11 PTQV01000028.1 Genbank gene 43810 45315 . - . ID=gene-C5O68_04855;Name=C5O68_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04855 PTQV01000028.1 Protein Homology CDS 43810 45315 . - 0 ID=cds-RJP82854.1;Parent=gene-C5O68_04855;Dbxref=NCBI_GP:RJP82854.1;Name=RJP82854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447120.1;locus_tag=C5O68_04855;product=zinc ABC transporter substrate-binding protein AdcA;protein_id=RJP82854.1;transl_table=11 PTQV01000028.1 Genbank gene 45325 46131 . - . ID=gene-C5O68_04860;Name=C5O68_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04860 PTQV01000028.1 Protein Homology CDS 45325 46131 . - 0 ID=cds-RJP82855.1;Parent=gene-C5O68_04860;Dbxref=NCBI_GP:RJP82855.1;Name=RJP82855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447121.1;locus_tag=C5O68_04860;product=zinc ABC transporter permease;protein_id=RJP82855.1;transl_table=11 PTQV01000028.1 Genbank gene 46124 46828 . - . ID=gene-C5O68_04865;Name=C5O68_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04865 PTQV01000028.1 Protein Homology CDS 46124 46828 . - 0 ID=cds-RJP82856.1;Parent=gene-C5O68_04865;Dbxref=NCBI_GP:RJP82856.1;Name=RJP82856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359568.1;locus_tag=C5O68_04865;product=metal ABC transporter ATP-binding protein;protein_id=RJP82856.1;transl_table=11 PTQV01000028.1 Genbank gene 46828 47268 . - . ID=gene-C5O68_04870;Name=C5O68_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04870 PTQV01000028.1 Protein Homology CDS 46828 47268 . - 0 ID=cds-RJP82857.1;Parent=gene-C5O68_04870;Dbxref=NCBI_GP:RJP82857.1;Name=RJP82857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447123.1;locus_tag=C5O68_04870;product=transcriptional regulator;protein_id=RJP82857.1;transl_table=11 PTQV01000028.1 Genbank gene 47421 48689 . - . ID=gene-C5O68_04875;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=C5O68_04875 PTQV01000028.1 Protein Homology CDS 47421 48689 . - 0 ID=cds-RJP82858.1;Parent=gene-C5O68_04875;Dbxref=NCBI_GP:RJP82858.1;Name=RJP82858.1;gbkey=CDS;gene=dltD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447124.1;locus_tag=C5O68_04875;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=RJP82858.1;transl_table=11 PTQV01000028.1 Genbank gene 48682 48921 . - . ID=gene-C5O68_04880;Name=C5O68_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04880 PTQV01000028.1 Protein Homology CDS 48682 48921 . - 0 ID=cds-RJP82859.1;Parent=gene-C5O68_04880;Dbxref=NCBI_GP:RJP82859.1;Name=RJP82859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359571.1;locus_tag=C5O68_04880;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=RJP82859.1;transl_table=11 PTQV01000028.1 Genbank gene 48934 50178 . - . ID=gene-C5O68_04885;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=C5O68_04885 PTQV01000028.1 Protein Homology CDS 48934 50178 . - 0 ID=cds-RJP82860.1;Parent=gene-C5O68_04885;Dbxref=NCBI_GP:RJP82860.1;Name=RJP82860.1;gbkey=CDS;gene=dltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359572.1;locus_tag=C5O68_04885;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=RJP82860.1;transl_table=11 PTQV01000028.1 Genbank gene 50175 51725 . - . ID=gene-C5O68_04890;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=C5O68_04890 PTQV01000028.1 Protein Homology CDS 50175 51725 . - 0 ID=cds-RJP82861.1;Parent=gene-C5O68_04890;Dbxref=NCBI_GP:RJP82861.1;Name=RJP82861.1;gbkey=CDS;gene=dltA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447127.1;locus_tag=C5O68_04890;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=RJP82861.1;transl_table=11 PTQV01000028.1 Genbank gene 51746 51877 . - . ID=gene-C5O68_04895;Name=C5O68_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04895 PTQV01000028.1 Protein Homology CDS 51746 51877 . - 0 ID=cds-RJP82862.1;Parent=gene-C5O68_04895;Dbxref=NCBI_GP:RJP82862.1;Name=RJP82862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036243.1;locus_tag=C5O68_04895;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=RJP82862.1;transl_table=11 PTQV01000028.1 Genbank pseudogene 52129 52206 . - . ID=gene-C5O68_04900;Name=C5O68_04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04900;pseudo=true PTQV01000028.1 Protein Homology CDS 52129 52206 . - 0 ID=cds-C5O68_04900;Parent=gene-C5O68_04900;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397737.1;locus_tag=C5O68_04900;product=DNA alkylation repair protein;pseudo=true;transl_table=11 PTQV01000028.1 Genbank gene 52210 52914 . - . ID=gene-C5O68_04905;Name=C5O68_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04905 PTQV01000028.1 Protein Homology CDS 52210 52914 . - 0 ID=cds-RJP82863.1;Parent=gene-C5O68_04905;Dbxref=NCBI_GP:RJP82863.1;Name=RJP82863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359579.1;locus_tag=C5O68_04905;product=aquaporin family protein;protein_id=RJP82863.1;transl_table=11 PTQV01000028.1 Genbank gene 52984 54810 . - . ID=gene-C5O68_04910;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=C5O68_04910 PTQV01000028.1 Protein Homology CDS 52984 54810 . - 0 ID=cds-RJP82864.1;Parent=gene-C5O68_04910;Dbxref=NCBI_GP:RJP82864.1;Name=RJP82864.1;gbkey=CDS;gene=glpO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447130.1;locus_tag=C5O68_04910;product=type 1 glycerol-3-phosphate oxidase;protein_id=RJP82864.1;transl_table=11 PTQV01000028.1 Genbank gene 54852 56360 . - . ID=gene-C5O68_04915;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=C5O68_04915 PTQV01000028.1 Protein Homology CDS 54852 56360 . - 0 ID=cds-RJP82865.1;Parent=gene-C5O68_04915;Dbxref=NCBI_GP:RJP82865.1;Name=RJP82865.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359582.1;locus_tag=C5O68_04915;product=glycerol kinase;protein_id=RJP82865.1;transl_table=11 PTQV01000028.1 Genbank gene 56519 57946 . - . ID=gene-C5O68_04920;Name=C5O68_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04920 PTQV01000028.1 Protein Homology CDS 56519 57946 . - 0 ID=cds-RJP82866.1;Parent=gene-C5O68_04920;Dbxref=NCBI_GP:RJP82866.1;Name=RJP82866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359583.1;locus_tag=C5O68_04920;product=hypothetical protein;protein_id=RJP82866.1;transl_table=11 PTQV01000028.1 Genbank gene 58111 58983 . + . ID=gene-C5O68_04925;Name=C5O68_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04925 PTQV01000028.1 Protein Homology CDS 58111 58983 . + 0 ID=cds-RJP82867.1;Parent=gene-C5O68_04925;Dbxref=NCBI_GP:RJP82867.1;Name=RJP82867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357853.1;locus_tag=C5O68_04925;product=Hsp33 family molecular chaperone HslO;protein_id=RJP82867.1;transl_table=11 PTQV01000028.1 Genbank gene 58940 59950 . + . ID=gene-C5O68_04930;Name=C5O68_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04930 PTQV01000028.1 Protein Homology CDS 58940 59950 . + 0 ID=cds-RJP82868.1;Parent=gene-C5O68_04930;Dbxref=NCBI_GP:RJP82868.1;Name=RJP82868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359585.1;locus_tag=C5O68_04930;product=tRNA dihydrouridine synthase DusB;protein_id=RJP82868.1;transl_table=11 PTQV01000028.1 Genbank gene 59973 60668 . - . ID=gene-C5O68_04935;Name=C5O68_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04935 PTQV01000028.1 Protein Homology CDS 59973 60668 . - 0 ID=cds-RJP82869.1;Parent=gene-C5O68_04935;Dbxref=NCBI_GP:RJP82869.1;Name=RJP82869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447136.1;locus_tag=C5O68_04935;product=hypothetical protein;protein_id=RJP82869.1;transl_table=11 ##sequence-region PTQV01000029.1 1 18960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000029.1 Genbank region 1 18960 . + . ID=PTQV01000029.1:1..18960;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000029.1 Genbank gene 207 1382 . + . ID=gene-C5O68_04940;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=C5O68_04940 PTQV01000029.1 Protein Homology CDS 207 1382 . + 0 ID=cds-RJP82787.1;Parent=gene-C5O68_04940;Dbxref=NCBI_GP:RJP82787.1;Name=RJP82787.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358701.1;locus_tag=C5O68_04940;product=A/G-specific adenine glycosylase;protein_id=RJP82787.1;transl_table=11 PTQV01000029.1 Genbank gene 1438 2142 . + . ID=gene-C5O68_04945;Name=C5O68_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04945 PTQV01000029.1 Protein Homology CDS 1438 2142 . + 0 ID=cds-RJP82788.1;Parent=gene-C5O68_04945;Dbxref=NCBI_GP:RJP82788.1;Name=RJP82788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722069.1;locus_tag=C5O68_04945;product=DNA-binding response regulator;protein_id=RJP82788.1;transl_table=11 PTQV01000029.1 Genbank gene 2135 3484 . + . ID=gene-C5O68_04950;Name=vicK;gbkey=Gene;gene=vicK;gene_biotype=protein_coding;locus_tag=C5O68_04950 PTQV01000029.1 Protein Homology CDS 2135 3484 . + 0 ID=cds-RJP82789.1;Parent=gene-C5O68_04950;Dbxref=NCBI_GP:RJP82789.1;Name=RJP82789.1;gbkey=CDS;gene=vicK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358699.1;locus_tag=C5O68_04950;product=cell wall metabolism sensor histidine kinase VicK;protein_id=RJP82789.1;transl_table=11 PTQV01000029.1 Genbank gene 3486 4295 . + . ID=gene-C5O68_04955;Name=C5O68_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04955 PTQV01000029.1 Protein Homology CDS 3486 4295 . + 0 ID=cds-RJP82790.1;Parent=gene-C5O68_04955;Dbxref=NCBI_GP:RJP82790.1;Name=RJP82790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446286.1;locus_tag=C5O68_04955;product=MBL fold metallo-hydrolase;protein_id=RJP82790.1;transl_table=11 PTQV01000029.1 Genbank gene 4326 4628 . + . ID=gene-C5O68_04960;Name=C5O68_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04960 PTQV01000029.1 Protein Homology CDS 4326 4628 . + 0 ID=cds-RJP82791.1;Parent=gene-C5O68_04960;Dbxref=NCBI_GP:RJP82791.1;Name=RJP82791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358697.1;locus_tag=C5O68_04960;product=antitoxin;protein_id=RJP82791.1;transl_table=11 PTQV01000029.1 Genbank gene 4621 4884 . + . ID=gene-C5O68_04965;Name=C5O68_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04965 PTQV01000029.1 Protein Homology CDS 4621 4884 . + 0 ID=cds-RJP82792.1;Parent=gene-C5O68_04965;Dbxref=NCBI_GP:RJP82792.1;Name=RJP82792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358696.1;locus_tag=C5O68_04965;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=RJP82792.1;transl_table=11 PTQV01000029.1 Genbank pseudogene 4959 6785 . + . ID=gene-C5O68_04970;Name=C5O68_04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_04970;pseudo=true PTQV01000029.1 Protein Homology CDS 4959 6785 . + 0 ID=cds-C5O68_04970;Parent=gene-C5O68_04970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000150981.1;locus_tag=C5O68_04970;product=restriction endonuclease;pseudo=true;transl_table=11 PTQV01000029.1 Genbank gene 6950 10204 . + . ID=gene-C5O68_04975;Name=C5O68_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04975 PTQV01000029.1 Protein Homology CDS 6950 10204 . + 0 ID=cds-RJP82793.1;Parent=gene-C5O68_04975;Dbxref=NCBI_GP:RJP82793.1;Name=RJP82793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358694.1;locus_tag=C5O68_04975;product=restriction endonuclease;protein_id=RJP82793.1;transl_table=11 PTQV01000029.1 Genbank gene 10554 11522 . - . ID=gene-C5O68_04980;Name=C5O68_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04980 PTQV01000029.1 Protein Homology CDS 10554 11522 . - 0 ID=cds-RJP82794.1;Parent=gene-C5O68_04980;Dbxref=NCBI_GP:RJP82794.1;Name=RJP82794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035175.1;locus_tag=C5O68_04980;product=L-lactate dehydrogenase;protein_id=RJP82794.1;transl_table=11 PTQV01000029.1 Genbank gene 11716 14184 . + . ID=gene-C5O68_04985;Name=C5O68_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04985 PTQV01000029.1 Protein Homology CDS 11716 14184 . + 0 ID=cds-RJP82795.1;Parent=gene-C5O68_04985;Dbxref=NCBI_GP:RJP82795.1;Name=RJP82795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001152995.1;locus_tag=C5O68_04985;product=DNA gyrase subunit A;protein_id=RJP82795.1;transl_table=11 PTQV01000029.1 Genbank gene 14184 14927 . + . ID=gene-C5O68_04990;Name=C5O68_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04990 PTQV01000029.1 Protein Homology CDS 14184 14927 . + 0 ID=cds-RJP82796.1;Parent=gene-C5O68_04990;Dbxref=NCBI_GP:RJP82796.1;Name=RJP82796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358691.1;locus_tag=C5O68_04990;product=sortase;protein_id=RJP82796.1;transl_table=11 PTQV01000029.1 Genbank gene 15060 15368 . + . ID=gene-C5O68_04995;Name=C5O68_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_04995 PTQV01000029.1 Protein Homology CDS 15060 15368 . + 0 ID=cds-RJP82797.1;Parent=gene-C5O68_04995;Dbxref=NCBI_GP:RJP82797.1;Name=RJP82797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291823.1;locus_tag=C5O68_04995;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=RJP82797.1;transl_table=11 PTQV01000029.1 Genbank gene 15464 16738 . + . ID=gene-C5O68_05000;Name=C5O68_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05000 PTQV01000029.1 Protein Homology CDS 15464 16738 . + 0 ID=cds-RJP82798.1;Parent=gene-C5O68_05000;Dbxref=NCBI_GP:RJP82798.1;Name=RJP82798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358687.1;locus_tag=C5O68_05000;product=DUF2130 domain-containing protein;protein_id=RJP82798.1;transl_table=11 PTQV01000029.1 Genbank gene 16748 17626 . + . ID=gene-C5O68_05005;Name=C5O68_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05005 PTQV01000029.1 Protein Homology CDS 16748 17626 . + 0 ID=cds-RJP82799.1;Parent=gene-C5O68_05005;Dbxref=NCBI_GP:RJP82799.1;Name=RJP82799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358685.1;locus_tag=C5O68_05005;product=tRNA pseudouridine(55) synthase TruB;protein_id=RJP82799.1;transl_table=11 PTQV01000029.1 Genbank gene 17867 18169 . + . ID=gene-C5O68_05010;Name=C5O68_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05010 PTQV01000029.1 Protein Homology CDS 17867 18169 . + 0 ID=cds-RJP82800.1;Parent=gene-C5O68_05010;Dbxref=NCBI_GP:RJP82800.1;Name=RJP82800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358684.1;locus_tag=C5O68_05010;product=bacteriocin immunity protein;protein_id=RJP82800.1;transl_table=11 PTQV01000029.1 Genbank gene 18172 18282 . - . ID=gene-C5O68_05015;Name=C5O68_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05015 PTQV01000029.1 Protein Homology CDS 18172 18282 . - 0 ID=cds-RJP82801.1;Parent=gene-C5O68_05015;Dbxref=NCBI_GP:RJP82801.1;Name=RJP82801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809208.1;locus_tag=C5O68_05015;product=pseudouridine synthase;protein_id=RJP82801.1;transl_table=11 PTQV01000029.1 Genbank gene 18277 18915 . + . ID=gene-C5O68_05020;Name=C5O68_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05020 PTQV01000029.1 Protein Homology CDS 18277 18915 . + 0 ID=cds-RJP82802.1;Parent=gene-C5O68_05020;Dbxref=NCBI_GP:RJP82802.1;Name=RJP82802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446125.1;locus_tag=C5O68_05020;product=uridine kinase;protein_id=RJP82802.1;transl_table=11 ##sequence-region PTQV01000002.1 1 82578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000002.1 Genbank region 1 82578 . + . ID=PTQV01000002.1:1..82578;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000002.1 Genbank gene 1 1390 . - . ID=gene-C5O68_00365;Name=C5O68_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00365;partial=true;start_range=.,1 PTQV01000002.1 Protein Homology CDS 1 1390 . - 0 ID=cds-RJP84651.1;Parent=gene-C5O68_00365;Dbxref=NCBI_GP:RJP84651.1;Name=RJP84651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339662.1;locus_tag=C5O68_00365;partial=true;product=hypothetical protein;protein_id=RJP84651.1;start_range=.,1;transl_table=11 PTQV01000002.1 Genbank gene 1395 1745 . - . ID=gene-C5O68_00370;Name=C5O68_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00370 PTQV01000002.1 Protein Homology CDS 1395 1745 . - 0 ID=cds-RJP84652.1;Parent=gene-C5O68_00370;Dbxref=NCBI_GP:RJP84652.1;Name=RJP84652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399159.1;locus_tag=C5O68_00370;product=hypothetical protein;protein_id=RJP84652.1;transl_table=11 PTQV01000002.1 Genbank gene 1754 3802 . - . ID=gene-C5O68_00375;Name=C5O68_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00375 PTQV01000002.1 Protein Homology CDS 1754 3802 . - 0 ID=cds-RJP84742.1;Parent=gene-C5O68_00375;Dbxref=NCBI_GP:RJP84742.1;Name=RJP84742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001852057.1;locus_tag=C5O68_00375;product=hypothetical protein;protein_id=RJP84742.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 5118 5663 . - . ID=gene-C5O68_00380;Name=C5O68_00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00380;pseudo=true PTQV01000002.1 Protein Homology CDS 5118 5663 . - 0 ID=cds-C5O68_00380;Parent=gene-C5O68_00380;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212172.1;locus_tag=C5O68_00380;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 5650 6000 . - . ID=gene-C5O68_00385;Name=C5O68_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00385 PTQV01000002.1 Protein Homology CDS 5650 6000 . - 0 ID=cds-RJP84653.1;Parent=gene-C5O68_00385;Dbxref=NCBI_GP:RJP84653.1;Name=RJP84653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478007.1;locus_tag=C5O68_00385;product=hypothetical protein;protein_id=RJP84653.1;transl_table=11 PTQV01000002.1 Genbank gene 6039 6419 . - . ID=gene-C5O68_00390;Name=C5O68_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00390 PTQV01000002.1 Protein Homology CDS 6039 6419 . - 0 ID=cds-RJP84654.1;Parent=gene-C5O68_00390;Dbxref=NCBI_GP:RJP84654.1;Name=RJP84654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185634.1;locus_tag=C5O68_00390;product=hypothetical protein;protein_id=RJP84654.1;transl_table=11 PTQV01000002.1 Genbank gene 6424 6837 . - . ID=gene-C5O68_00395;Name=C5O68_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00395 PTQV01000002.1 Protein Homology CDS 6424 6837 . - 0 ID=cds-RJP84655.1;Parent=gene-C5O68_00395;Dbxref=NCBI_GP:RJP84655.1;Name=RJP84655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880678.1;locus_tag=C5O68_00395;product=phage tail protein;protein_id=RJP84655.1;transl_table=11 PTQV01000002.1 Genbank gene 6840 7208 . - . ID=gene-C5O68_00400;Name=C5O68_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00400 PTQV01000002.1 Protein Homology CDS 6840 7208 . - 0 ID=cds-RJP84656.1;Parent=gene-C5O68_00400;Dbxref=NCBI_GP:RJP84656.1;Name=RJP84656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608233.1;locus_tag=C5O68_00400;product=hypothetical protein;protein_id=RJP84656.1;transl_table=11 PTQV01000002.1 Genbank gene 7205 7720 . - . ID=gene-C5O68_00405;Name=C5O68_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00405 PTQV01000002.1 Protein Homology CDS 7205 7720 . - 0 ID=cds-RJP84657.1;Parent=gene-C5O68_00405;Dbxref=NCBI_GP:RJP84657.1;Name=RJP84657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284942.1;locus_tag=C5O68_00405;product=hypothetical protein;protein_id=RJP84657.1;transl_table=11 PTQV01000002.1 Genbank gene 7695 8033 . - . ID=gene-C5O68_00410;Name=C5O68_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00410 PTQV01000002.1 Protein Homology CDS 7695 8033 . - 0 ID=cds-RJP84658.1;Parent=gene-C5O68_00410;Dbxref=NCBI_GP:RJP84658.1;Name=RJP84658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000478943.1;locus_tag=C5O68_00410;product=hypothetical protein;protein_id=RJP84658.1;transl_table=11 PTQV01000002.1 Genbank gene 8014 8325 . - . ID=gene-C5O68_00415;Name=C5O68_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00415 PTQV01000002.1 Protein Homology CDS 8014 8325 . - 0 ID=cds-RJP84659.1;Parent=gene-C5O68_00415;Dbxref=NCBI_GP:RJP84659.1;Name=RJP84659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866508.1;locus_tag=C5O68_00415;product=phage head-tail adapter protein;protein_id=RJP84659.1;transl_table=11 PTQV01000002.1 Genbank gene 8327 8515 . - . ID=gene-C5O68_00420;Name=C5O68_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00420 PTQV01000002.1 Protein Homology CDS 8327 8515 . - 0 ID=cds-RJP84660.1;Parent=gene-C5O68_00420;Dbxref=NCBI_GP:RJP84660.1;Name=RJP84660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669348.1;locus_tag=C5O68_00420;product=hypothetical protein;protein_id=RJP84660.1;transl_table=11 PTQV01000002.1 Genbank gene 8505 8687 . - . ID=gene-C5O68_00425;Name=C5O68_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00425 PTQV01000002.1 Protein Homology CDS 8505 8687 . - 0 ID=cds-RJP84661.1;Parent=gene-C5O68_00425;Dbxref=NCBI_GP:RJP84661.1;Name=RJP84661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054935.1;locus_tag=C5O68_00425;product=Rho termination protein;protein_id=RJP84661.1;transl_table=11 PTQV01000002.1 Genbank gene 8699 9541 . - . ID=gene-C5O68_00430;Name=C5O68_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00430 PTQV01000002.1 Protein Homology CDS 8699 9541 . - 0 ID=cds-RJP84662.1;Parent=gene-C5O68_00430;Dbxref=NCBI_GP:RJP84662.1;Name=RJP84662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123892.1;locus_tag=C5O68_00430;product=N4-gp56 family major capsid protein;protein_id=RJP84662.1;transl_table=11 PTQV01000002.1 Genbank gene 9546 10121 . - . ID=gene-C5O68_00435;Name=C5O68_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00435 PTQV01000002.1 Protein Homology CDS 9546 10121 . - 0 ID=cds-RJP84663.1;Parent=gene-C5O68_00435;Dbxref=NCBI_GP:RJP84663.1;Name=RJP84663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001559.1;locus_tag=C5O68_00435;product=phage scaffold protein;protein_id=RJP84663.1;transl_table=11 PTQV01000002.1 Genbank gene 10324 10575 . - . ID=gene-C5O68_00440;Name=C5O68_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00440 PTQV01000002.1 Protein Homology CDS 10324 10575 . - 0 ID=cds-RJP84664.1;Parent=gene-C5O68_00440;Dbxref=NCBI_GP:RJP84664.1;Name=RJP84664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000890161.1;locus_tag=C5O68_00440;product=hypothetical protein;protein_id=RJP84664.1;transl_table=11 PTQV01000002.1 Genbank gene 10577 10840 . - . ID=gene-C5O68_00445;Name=C5O68_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00445 PTQV01000002.1 Protein Homology CDS 10577 10840 . - 0 ID=cds-RJP84665.1;Parent=gene-C5O68_00445;Dbxref=NCBI_GP:RJP84665.1;Name=RJP84665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003693345.1;locus_tag=C5O68_00445;product=hypothetical protein;protein_id=RJP84665.1;transl_table=11 PTQV01000002.1 Genbank gene 10883 11296 . - . ID=gene-C5O68_00450;Name=C5O68_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00450 PTQV01000002.1 Protein Homology CDS 10883 11296 . - 0 ID=cds-RJP84666.1;Parent=gene-C5O68_00450;Dbxref=NCBI_GP:RJP84666.1;Name=RJP84666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000565278.1;locus_tag=C5O68_00450;product=HD domain-containing protein;protein_id=RJP84666.1;transl_table=11 PTQV01000002.1 Genbank gene 11293 11502 . - . ID=gene-C5O68_00455;Name=C5O68_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00455 PTQV01000002.1 Protein Homology CDS 11293 11502 . - 0 ID=cds-RJP84667.1;Parent=gene-C5O68_00455;Dbxref=NCBI_GP:RJP84667.1;Name=RJP84667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000651745.1;locus_tag=C5O68_00455;product=hypothetical protein;protein_id=RJP84667.1;transl_table=11 PTQV01000002.1 Genbank gene 11504 13087 . - . ID=gene-C5O68_00460;Name=C5O68_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00460 PTQV01000002.1 Protein Homology CDS 11504 13087 . - 0 ID=cds-RJP84668.1;Parent=gene-C5O68_00460;Dbxref=NCBI_GP:RJP84668.1;Name=RJP84668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356281.1;locus_tag=C5O68_00460;product=phage head morphogenesis protein;protein_id=RJP84668.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 13050 14519 . - . ID=gene-C5O68_00465;Name=C5O68_00465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00465;pseudo=true PTQV01000002.1 Protein Homology CDS 13050 14519 . - 0 ID=cds-C5O68_00465;Parent=gene-C5O68_00465;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399164.1;locus_tag=C5O68_00465;product=phage portal protein;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 14531 15829 . - . ID=gene-C5O68_00470;Name=C5O68_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00470 PTQV01000002.1 Protein Homology CDS 14531 15829 . - 0 ID=cds-RJP84669.1;Parent=gene-C5O68_00470;Dbxref=NCBI_GP:RJP84669.1;Name=RJP84669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084419.1;locus_tag=C5O68_00470;product=PBSX family phage terminase large subunit;protein_id=RJP84669.1;transl_table=11 PTQV01000002.1 Genbank gene 15807 16316 . - . ID=gene-C5O68_00475;Name=C5O68_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00475 PTQV01000002.1 Protein Homology CDS 15807 16316 . - 0 ID=cds-RJP84670.1;Parent=gene-C5O68_00475;Dbxref=NCBI_GP:RJP84670.1;Name=RJP84670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863690.1;locus_tag=C5O68_00475;product=terminase small subunit;protein_id=RJP84670.1;transl_table=11 PTQV01000002.1 Genbank gene 16776 17222 . - . ID=gene-C5O68_00480;Name=C5O68_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00480 PTQV01000002.1 Protein Homology CDS 16776 17222 . - 0 ID=cds-RJP84671.1;Parent=gene-C5O68_00480;Dbxref=NCBI_GP:RJP84671.1;Name=RJP84671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445581.1;locus_tag=C5O68_00480;product=transcriptional regulator;protein_id=RJP84671.1;transl_table=11 PTQV01000002.1 Genbank gene 17351 17566 . + . ID=gene-C5O68_00485;Name=C5O68_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00485 PTQV01000002.1 Protein Homology CDS 17351 17566 . + 0 ID=cds-RJP84672.1;Parent=gene-C5O68_00485;Dbxref=NCBI_GP:RJP84672.1;Name=RJP84672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445580.1;locus_tag=C5O68_00485;product=AbrB family transcriptional regulator;protein_id=RJP84672.1;transl_table=11 PTQV01000002.1 Genbank gene 17550 17903 . + . ID=gene-C5O68_00490;Name=C5O68_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00490 PTQV01000002.1 Protein Homology CDS 17550 17903 . + 0 ID=cds-RJP84673.1;Parent=gene-C5O68_00490;Dbxref=NCBI_GP:RJP84673.1;Name=RJP84673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445579.1;locus_tag=C5O68_00490;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=RJP84673.1;transl_table=11 PTQV01000002.1 Genbank gene 17924 18331 . - . ID=gene-C5O68_00495;Name=C5O68_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00495 PTQV01000002.1 Protein Homology CDS 17924 18331 . - 0 ID=cds-RJP84674.1;Parent=gene-C5O68_00495;Dbxref=NCBI_GP:RJP84674.1;Name=RJP84674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397661.1;locus_tag=C5O68_00495;product=hypothetical protein;protein_id=RJP84674.1;transl_table=11 PTQV01000002.1 Genbank gene 18343 18765 . - . ID=gene-C5O68_00500;Name=C5O68_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00500 PTQV01000002.1 Protein Homology CDS 18343 18765 . - 0 ID=cds-RJP84675.1;Parent=gene-C5O68_00500;Dbxref=NCBI_GP:RJP84675.1;Name=RJP84675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140868.1;locus_tag=C5O68_00500;product=hypothetical protein;protein_id=RJP84675.1;transl_table=11 PTQV01000002.1 Genbank gene 18762 19022 . - . ID=gene-C5O68_00505;Name=C5O68_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00505 PTQV01000002.1 Protein Homology CDS 18762 19022 . - 0 ID=cds-RJP84676.1;Parent=gene-C5O68_00505;Dbxref=NCBI_GP:RJP84676.1;Name=RJP84676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=C5O68_00505;product=hypothetical protein;protein_id=RJP84676.1;transl_table=11 PTQV01000002.1 Genbank gene 19019 19495 . - . ID=gene-C5O68_00510;Name=C5O68_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00510 PTQV01000002.1 Protein Homology CDS 19019 19495 . - 0 ID=cds-RJP84677.1;Parent=gene-C5O68_00510;Dbxref=NCBI_GP:RJP84677.1;Name=RJP84677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502465.1;locus_tag=C5O68_00510;product=SAM-dependent methyltransferase;protein_id=RJP84677.1;transl_table=11 PTQV01000002.1 Genbank gene 19495 19782 . - . ID=gene-C5O68_00515;Name=C5O68_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00515 PTQV01000002.1 Protein Homology CDS 19495 19782 . - 0 ID=cds-RJP84678.1;Parent=gene-C5O68_00515;Dbxref=NCBI_GP:RJP84678.1;Name=RJP84678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194857.1;locus_tag=C5O68_00515;product=hypothetical protein;protein_id=RJP84678.1;transl_table=11 PTQV01000002.1 Genbank gene 19782 20267 . - . ID=gene-C5O68_00520;Name=C5O68_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00520 PTQV01000002.1 Protein Homology CDS 19782 20267 . - 0 ID=cds-RJP84679.1;Parent=gene-C5O68_00520;Dbxref=NCBI_GP:RJP84679.1;Name=RJP84679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021761.1;locus_tag=C5O68_00520;product=hypothetical protein;protein_id=RJP84679.1;transl_table=11 PTQV01000002.1 Genbank gene 20245 20448 . - . ID=gene-C5O68_00525;Name=C5O68_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00525 PTQV01000002.1 Protein Homology CDS 20245 20448 . - 0 ID=cds-RJP84680.1;Parent=gene-C5O68_00525;Dbxref=NCBI_GP:RJP84680.1;Name=RJP84680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872731.1;locus_tag=C5O68_00525;product=hypothetical protein;protein_id=RJP84680.1;transl_table=11 PTQV01000002.1 Genbank gene 20435 20602 . - . ID=gene-C5O68_00530;Name=C5O68_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00530 PTQV01000002.1 Protein Homology CDS 20435 20602 . - 0 ID=cds-RJP84681.1;Parent=gene-C5O68_00530;Dbxref=NCBI_GP:RJP84681.1;Name=RJP84681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=C5O68_00530;product=hypothetical protein;protein_id=RJP84681.1;transl_table=11 PTQV01000002.1 Genbank gene 20618 21043 . - . ID=gene-C5O68_00535;Name=C5O68_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00535 PTQV01000002.1 Protein Homology CDS 20618 21043 . - 0 ID=cds-RJP84682.1;Parent=gene-C5O68_00535;Dbxref=NCBI_GP:RJP84682.1;Name=RJP84682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001158043.1;locus_tag=C5O68_00535;product=hypothetical protein;protein_id=RJP84682.1;transl_table=11 PTQV01000002.1 Genbank gene 21021 21383 . - . ID=gene-C5O68_00540;Name=C5O68_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00540 PTQV01000002.1 Protein Homology CDS 21021 21383 . - 0 ID=cds-RJP84683.1;Parent=gene-C5O68_00540;Dbxref=NCBI_GP:RJP84683.1;Name=RJP84683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284860.1;locus_tag=C5O68_00540;product=XRE family transcriptional regulator;protein_id=RJP84683.1;transl_table=11 PTQV01000002.1 Genbank gene 21601 22650 . - . ID=gene-C5O68_00545;Name=C5O68_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00545 PTQV01000002.1 Protein Homology CDS 21601 22650 . - 0 ID=cds-RJP84684.1;Parent=gene-C5O68_00545;Dbxref=NCBI_GP:RJP84684.1;Name=RJP84684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646346.1;locus_tag=C5O68_00545;product=hypothetical protein;protein_id=RJP84684.1;transl_table=11 PTQV01000002.1 Genbank gene 22660 23412 . - . ID=gene-C5O68_00550;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=C5O68_00550 PTQV01000002.1 Protein Homology CDS 22660 23412 . - 0 ID=cds-RJP84685.1;Parent=gene-C5O68_00550;Dbxref=NCBI_GP:RJP84685.1;Name=RJP84685.1;gbkey=CDS;gene=bet;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866809.1;locus_tag=C5O68_00550;product=phage recombination protein Bet;protein_id=RJP84685.1;transl_table=11 PTQV01000002.1 Genbank gene 23409 23588 . - . ID=gene-C5O68_00555;Name=C5O68_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00555 PTQV01000002.1 Protein Homology CDS 23409 23588 . - 0 ID=cds-RJP84686.1;Parent=gene-C5O68_00555;Dbxref=NCBI_GP:RJP84686.1;Name=RJP84686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613911.1;locus_tag=C5O68_00555;product=hypothetical protein;protein_id=RJP84686.1;transl_table=11 PTQV01000002.1 Genbank gene 23809 24156 . - . ID=gene-C5O68_00560;Name=C5O68_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00560 PTQV01000002.1 Protein Homology CDS 23809 24156 . - 0 ID=cds-RJP84687.1;Parent=gene-C5O68_00560;Dbxref=NCBI_GP:RJP84687.1;Name=RJP84687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973630.1;locus_tag=C5O68_00560;product=hypothetical protein;protein_id=RJP84687.1;transl_table=11 PTQV01000002.1 Genbank gene 24156 24410 . - . ID=gene-C5O68_00565;Name=C5O68_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00565 PTQV01000002.1 Protein Homology CDS 24156 24410 . - 0 ID=cds-RJP84688.1;Parent=gene-C5O68_00565;Dbxref=NCBI_GP:RJP84688.1;Name=RJP84688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000608473.1;locus_tag=C5O68_00565;product=hypothetical protein;protein_id=RJP84688.1;transl_table=11 PTQV01000002.1 Genbank gene 24498 24764 . - . ID=gene-C5O68_00570;Name=C5O68_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00570 PTQV01000002.1 Protein Homology CDS 24498 24764 . - 0 ID=cds-RJP84689.1;Parent=gene-C5O68_00570;Dbxref=NCBI_GP:RJP84689.1;Name=RJP84689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000450962.1;locus_tag=C5O68_00570;product=hypothetical protein;protein_id=RJP84689.1;transl_table=11 PTQV01000002.1 Genbank gene 24883 25122 . + . ID=gene-C5O68_00575;Name=C5O68_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00575 PTQV01000002.1 Protein Homology CDS 24883 25122 . + 0 ID=cds-RJP84690.1;Parent=gene-C5O68_00575;Dbxref=NCBI_GP:RJP84690.1;Name=RJP84690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134992.1;locus_tag=C5O68_00575;product=hypothetical protein;protein_id=RJP84690.1;transl_table=11 PTQV01000002.1 Genbank gene 25542 25709 . + . ID=gene-C5O68_00580;Name=C5O68_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00580 PTQV01000002.1 Protein Homology CDS 25542 25709 . + 0 ID=cds-RJP84691.1;Parent=gene-C5O68_00580;Dbxref=NCBI_GP:RJP84691.1;Name=RJP84691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397654.1;locus_tag=C5O68_00580;product=YjzC family protein;protein_id=RJP84691.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 26105 26215 . - . ID=gene-C5O68_00585;Name=C5O68_00585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00585;pseudo=true PTQV01000002.1 Protein Homology CDS 26105 26215 . - 0 ID=cds-C5O68_00585;Parent=gene-C5O68_00585;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989840.1;locus_tag=C5O68_00585;product=replication protein;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 26495 26848 . - . ID=gene-C5O68_00590;Name=C5O68_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00590 PTQV01000002.1 Protein Homology CDS 26495 26848 . - 0 ID=cds-RJP84692.1;Parent=gene-C5O68_00590;Dbxref=NCBI_GP:RJP84692.1;Name=RJP84692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001163840.1;locus_tag=C5O68_00590;product=transcriptional regulator;protein_id=RJP84692.1;transl_table=11 PTQV01000002.1 Genbank gene 26836 27015 . - . ID=gene-C5O68_00595;Name=C5O68_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00595 PTQV01000002.1 Protein Homology CDS 26836 27015 . - 0 ID=cds-RJP84693.1;Parent=gene-C5O68_00595;Dbxref=NCBI_GP:RJP84693.1;Name=RJP84693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859599.1;locus_tag=C5O68_00595;product=hypothetical protein;protein_id=RJP84693.1;transl_table=11 PTQV01000002.1 Genbank gene 27088 27813 . - . ID=gene-C5O68_00600;Name=C5O68_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00600 PTQV01000002.1 Protein Homology CDS 27088 27813 . - 0 ID=cds-RJP84694.1;Parent=gene-C5O68_00600;Dbxref=NCBI_GP:RJP84694.1;Name=RJP84694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004151.1;locus_tag=C5O68_00600;product=oxidoreductase;protein_id=RJP84694.1;transl_table=11 PTQV01000002.1 Genbank gene 27826 28062 . - . ID=gene-C5O68_00605;Name=C5O68_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00605 PTQV01000002.1 Protein Homology CDS 27826 28062 . - 0 ID=cds-RJP84695.1;Parent=gene-C5O68_00605;Dbxref=NCBI_GP:RJP84695.1;Name=RJP84695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246378.1;locus_tag=C5O68_00605;product=DUF739 domain-containing protein;protein_id=RJP84695.1;transl_table=11 PTQV01000002.1 Genbank gene 28232 29035 . + . ID=gene-C5O68_00610;Name=C5O68_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00610 PTQV01000002.1 Protein Homology CDS 28232 29035 . + 0 ID=cds-RJP84696.1;Parent=gene-C5O68_00610;Dbxref=NCBI_GP:RJP84696.1;Name=RJP84696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257898.1;locus_tag=C5O68_00610;product=helix-turn-helix domain-containing protein;protein_id=RJP84696.1;transl_table=11 PTQV01000002.1 Genbank gene 29323 30768 . + . ID=gene-C5O68_00615;Name=C5O68_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00615 PTQV01000002.1 Protein Homology CDS 29323 30768 . + 0 ID=cds-RJP84697.1;Parent=gene-C5O68_00615;Dbxref=NCBI_GP:RJP84697.1;Name=RJP84697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866433.1;locus_tag=C5O68_00615;product=recombinase family protein;protein_id=RJP84697.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 30786 30848 . - . ID=gene-C5O68_00620;Name=C5O68_00620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00620;pseudo=true PTQV01000002.1 Protein Homology CDS 30786 30848 . - 0 ID=cds-C5O68_00620;Parent=gene-C5O68_00620;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359453.1;locus_tag=C5O68_00620;product=competence protein ComGC;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 30850 31866 . - . ID=gene-C5O68_00625;Name=C5O68_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00625 PTQV01000002.1 Protein Homology CDS 30850 31866 . - 0 ID=cds-RJP84698.1;Parent=gene-C5O68_00625;Dbxref=NCBI_GP:RJP84698.1;Name=RJP84698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355375.1;locus_tag=C5O68_00625;product=type II secretion system F family protein;protein_id=RJP84698.1;transl_table=11 PTQV01000002.1 Genbank gene 31814 32755 . - . ID=gene-C5O68_00630;Name=C5O68_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00630 PTQV01000002.1 Protein Homology CDS 31814 32755 . - 0 ID=cds-RJP84699.1;Parent=gene-C5O68_00630;Dbxref=NCBI_GP:RJP84699.1;Name=RJP84699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359455.1;locus_tag=C5O68_00630;product=type II/IV secretion system protein;protein_id=RJP84699.1;transl_table=11 PTQV01000002.1 Genbank gene 32831 33196 . - . ID=gene-C5O68_00635;Name=C5O68_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00635 PTQV01000002.1 Protein Homology CDS 32831 33196 . - 0 ID=cds-RJP84700.1;Parent=gene-C5O68_00635;Dbxref=NCBI_GP:RJP84700.1;Name=RJP84700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445357.1;locus_tag=C5O68_00635;product=DUF1033 domain-containing protein;protein_id=RJP84700.1;transl_table=11 PTQV01000002.1 Genbank gene 33318 34358 . - . ID=gene-C5O68_00640;Name=C5O68_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00640 PTQV01000002.1 Protein Homology CDS 33318 34358 . - 0 ID=cds-RJP84701.1;Parent=gene-C5O68_00640;Dbxref=NCBI_GP:RJP84701.1;Name=RJP84701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359457.1;locus_tag=C5O68_00640;product=alcohol dehydrogenase;protein_id=RJP84701.1;transl_table=11 PTQV01000002.1 Genbank gene 34677 34916 . - . ID=gene-C5O68_00645;Name=C5O68_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00645 PTQV01000002.1 Protein Homology CDS 34677 34916 . - 0 ID=cds-RJP84702.1;Parent=gene-C5O68_00645;Dbxref=NCBI_GP:RJP84702.1;Name=RJP84702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907299.1;locus_tag=C5O68_00645;product=hypothetical protein;protein_id=RJP84702.1;transl_table=11 PTQV01000002.1 Genbank gene 35030 35464 . - . ID=gene-C5O68_00650;Name=C5O68_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00650 PTQV01000002.1 Protein Homology CDS 35030 35464 . - 0 ID=cds-RJP84703.1;Parent=gene-C5O68_00650;Dbxref=NCBI_GP:RJP84703.1;Name=RJP84703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359471.1;locus_tag=C5O68_00650;product=cytidine deaminase;protein_id=RJP84703.1;transl_table=11 PTQV01000002.1 Genbank gene 35478 36938 . - . ID=gene-C5O68_00655;Name=C5O68_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00655 PTQV01000002.1 Protein Homology CDS 35478 36938 . - 0 ID=cds-RJP84704.1;Parent=gene-C5O68_00655;Dbxref=NCBI_GP:RJP84704.1;Name=RJP84704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445328.1;locus_tag=C5O68_00655;product=glutamate--tRNA ligase;protein_id=RJP84704.1;transl_table=11 PTQV01000002.1 Genbank gene 37069 38418 . - . ID=gene-C5O68_00660;Name=C5O68_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00660 PTQV01000002.1 Protein Homology CDS 37069 38418 . - 0 ID=cds-RJP84705.1;Parent=gene-C5O68_00660;Dbxref=NCBI_GP:RJP84705.1;Name=RJP84705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445327.1;locus_tag=C5O68_00660;product=glucose-6-phosphate isomerase;protein_id=RJP84705.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 38420 38585 . - . ID=gene-C5O68_00665;Name=C5O68_00665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00665;pseudo=true PTQV01000002.1 Protein Homology CDS 38420 38585 . - 0 ID=cds-C5O68_00665;Parent=gene-C5O68_00665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359474.1;locus_tag=C5O68_00665;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 38589 39278 . - . ID=gene-C5O68_00670;Name=C5O68_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00670 PTQV01000002.1 Protein Homology CDS 38589 39278 . - 0 ID=cds-RJP84706.1;Parent=gene-C5O68_00670;Dbxref=NCBI_GP:RJP84706.1;Name=RJP84706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445325.1;locus_tag=C5O68_00670;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=RJP84706.1;transl_table=11 PTQV01000002.1 Genbank gene 39567 41333 . - . ID=gene-C5O68_00675;Name=C5O68_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00675 PTQV01000002.1 Protein Homology CDS 39567 41333 . - 0 ID=cds-RJP84707.1;Parent=gene-C5O68_00675;Dbxref=NCBI_GP:RJP84707.1;Name=RJP84707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445324.1;locus_tag=C5O68_00675;product=ABC transporter ATP-binding protein;protein_id=RJP84707.1;transl_table=11 PTQV01000002.1 Genbank gene 41335 43041 . - . ID=gene-C5O68_00680;Name=C5O68_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00680 PTQV01000002.1 Protein Homology CDS 41335 43041 . - 0 ID=cds-RJP84708.1;Parent=gene-C5O68_00680;Dbxref=NCBI_GP:RJP84708.1;Name=RJP84708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445323.1;locus_tag=C5O68_00680;product=ABC transporter ATP-binding protein;protein_id=RJP84708.1;transl_table=11 PTQV01000002.1 Genbank gene 43187 45721 . - . ID=gene-C5O68_00685;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=C5O68_00685 PTQV01000002.1 Protein Homology CDS 43187 45721 . - 0 ID=cds-RJP84709.1;Parent=gene-C5O68_00685;Dbxref=NCBI_GP:RJP84709.1;Name=RJP84709.1;gbkey=CDS;gene=mutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445322.1;locus_tag=C5O68_00685;product=DNA mismatch repair protein MutS;protein_id=RJP84709.1;transl_table=11 PTQV01000002.1 Genbank gene 45772 46218 . - . ID=gene-C5O68_00690;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=C5O68_00690 PTQV01000002.1 Protein Homology CDS 45772 46218 . - 0 ID=cds-RJP84710.1;Parent=gene-C5O68_00690;Dbxref=NCBI_GP:RJP84710.1;Name=RJP84710.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445321.1;locus_tag=C5O68_00690;product=arginine repressor;protein_id=RJP84710.1;transl_table=11 PTQV01000002.1 Genbank gene 46354 48045 . + . ID=gene-C5O68_00695;Name=C5O68_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00695 PTQV01000002.1 Protein Homology CDS 46354 48045 . + 0 ID=cds-RJP84711.1;Parent=gene-C5O68_00695;Dbxref=NCBI_GP:RJP84711.1;Name=RJP84711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445320.1;locus_tag=C5O68_00695;product=arginine--tRNA ligase;protein_id=RJP84711.1;transl_table=11 PTQV01000002.1 Genbank gene 48194 48703 . + . ID=gene-C5O68_00700;Name=C5O68_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00700 PTQV01000002.1 Protein Homology CDS 48194 48703 . + 0 ID=cds-RJP84712.1;Parent=gene-C5O68_00700;Dbxref=NCBI_GP:RJP84712.1;Name=RJP84712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359483.1;locus_tag=C5O68_00700;product=cupin;protein_id=RJP84712.1;transl_table=11 PTQV01000002.1 Genbank gene 48787 49494 . + . ID=gene-C5O68_00705;Name=C5O68_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00705 PTQV01000002.1 Protein Homology CDS 48787 49494 . + 0 ID=cds-RJP84713.1;Parent=gene-C5O68_00705;Dbxref=NCBI_GP:RJP84713.1;Name=RJP84713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359484.1;locus_tag=C5O68_00705;product=DNA-binding response regulator;protein_id=RJP84713.1;transl_table=11 PTQV01000002.1 Genbank gene 49495 50826 . + . ID=gene-C5O68_00710;Name=C5O68_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00710 PTQV01000002.1 Protein Homology CDS 49495 50826 . + 0 ID=cds-RJP84714.1;Parent=gene-C5O68_00710;Dbxref=NCBI_GP:RJP84714.1;Name=RJP84714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359485.1;locus_tag=C5O68_00710;product=two-component sensor histidine kinase;protein_id=RJP84714.1;transl_table=11 PTQV01000002.1 Genbank gene 50930 51868 . + . ID=gene-C5O68_00715;Name=C5O68_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00715 PTQV01000002.1 Protein Homology CDS 50930 51868 . + 0 ID=cds-RJP84715.1;Parent=gene-C5O68_00715;Dbxref=NCBI_GP:RJP84715.1;Name=RJP84715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359486.1;locus_tag=C5O68_00715;product=phosphate ABC transporter substrate-binding protein;protein_id=RJP84715.1;transl_table=11 PTQV01000002.1 Genbank gene 51986 52849 . + . ID=gene-C5O68_00720;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C5O68_00720 PTQV01000002.1 Protein Homology CDS 51986 52849 . + 0 ID=cds-RJP84716.1;Parent=gene-C5O68_00720;Dbxref=NCBI_GP:RJP84716.1;Name=RJP84716.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359487.1;locus_tag=C5O68_00720;product=phosphate ABC transporter permease subunit PstC;protein_id=RJP84716.1;transl_table=11 PTQV01000002.1 Genbank gene 52842 53657 . + . ID=gene-C5O68_00725;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C5O68_00725 PTQV01000002.1 Protein Homology CDS 52842 53657 . + 0 ID=cds-RJP84717.1;Parent=gene-C5O68_00725;Dbxref=NCBI_GP:RJP84717.1;Name=RJP84717.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359488.1;locus_tag=C5O68_00725;product=phosphate ABC transporter permease PtsA;protein_id=RJP84717.1;transl_table=11 PTQV01000002.1 Genbank gene 53659 54411 . + . ID=gene-C5O68_00730;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C5O68_00730 PTQV01000002.1 Protein Homology CDS 53659 54411 . + 0 ID=cds-RJP84718.1;Parent=gene-C5O68_00730;Dbxref=NCBI_GP:RJP84718.1;Name=RJP84718.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003101281.1;locus_tag=C5O68_00730;product=phosphate ABC transporter ATP-binding protein;protein_id=RJP84718.1;transl_table=11 PTQV01000002.1 Genbank gene 54426 55076 . + . ID=gene-C5O68_00735;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C5O68_00735 PTQV01000002.1 Protein Homology CDS 54426 55076 . + 0 ID=cds-RJP84719.1;Parent=gene-C5O68_00735;Dbxref=NCBI_GP:RJP84719.1;Name=RJP84719.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359490.1;locus_tag=C5O68_00735;product=phosphate-specific transport system accessory protein PhoU;protein_id=RJP84719.1;transl_table=11 PTQV01000002.1 Genbank gene 55144 55569 . + . ID=gene-C5O68_00740;Name=C5O68_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00740 PTQV01000002.1 Protein Homology CDS 55144 55569 . + 0 ID=cds-RJP84720.1;Parent=gene-C5O68_00740;Dbxref=NCBI_GP:RJP84720.1;Name=RJP84720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13701.4;locus_tag=C5O68_00740;product=hypothetical protein;protein_id=RJP84720.1;transl_table=11 PTQV01000002.1 Genbank pseudogene 55684 56123 . - . ID=gene-C5O68_00745;Name=C5O68_00745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_00745;pseudo=true PTQV01000002.1 Protein Homology CDS 55684 56123 . - 0 ID=cds-C5O68_00745;Parent=gene-C5O68_00745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001206583.1;locus_tag=C5O68_00745;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 PTQV01000002.1 Genbank gene 56347 57363 . + . ID=gene-C5O68_00750;Name=C5O68_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00750 PTQV01000002.1 Protein Homology CDS 56347 57363 . + 0 ID=cds-RJP84721.1;Parent=gene-C5O68_00750;Dbxref=NCBI_GP:RJP84721.1;Name=RJP84721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359493.1;locus_tag=C5O68_00750;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=RJP84721.1;transl_table=11 PTQV01000002.1 Genbank gene 57385 58284 . + . ID=gene-C5O68_00755;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=C5O68_00755 PTQV01000002.1 Protein Homology CDS 57385 58284 . + 0 ID=cds-RJP84722.1;Parent=gene-C5O68_00755;Dbxref=NCBI_GP:RJP84722.1;Name=RJP84722.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445317.1;locus_tag=C5O68_00755;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=RJP84722.1;transl_table=11 PTQV01000002.1 Genbank gene 58338 59012 . - . ID=gene-C5O68_00760;Name=C5O68_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00760 PTQV01000002.1 Protein Homology CDS 58338 59012 . - 0 ID=cds-RJP84723.1;Parent=gene-C5O68_00760;Dbxref=NCBI_GP:RJP84723.1;Name=RJP84723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445316.1;locus_tag=C5O68_00760;product=rhomboid family intramembrane serine protease;protein_id=RJP84723.1;transl_table=11 PTQV01000002.1 Genbank gene 58996 59535 . - . ID=gene-C5O68_00765;Name=C5O68_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00765 PTQV01000002.1 Protein Homology CDS 58996 59535 . - 0 ID=cds-RJP84724.1;Parent=gene-C5O68_00765;Dbxref=NCBI_GP:RJP84724.1;Name=RJP84724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445315.1;locus_tag=C5O68_00765;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=RJP84724.1;transl_table=11 PTQV01000002.1 Genbank gene 59547 60677 . - . ID=gene-C5O68_00770;Name=C5O68_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00770 PTQV01000002.1 Protein Homology CDS 59547 60677 . - 0 ID=cds-RJP84725.1;Parent=gene-C5O68_00770;Dbxref=NCBI_GP:RJP84725.1;Name=RJP84725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359497.1;locus_tag=C5O68_00770;product=N-acetyldiaminopimelate deacetylase;protein_id=RJP84725.1;transl_table=11 PTQV01000002.1 Genbank gene 60746 61444 . - . ID=gene-C5O68_00775;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=C5O68_00775 PTQV01000002.1 Protein Homology CDS 60746 61444 . - 0 ID=cds-RJP84726.1;Parent=gene-C5O68_00775;Dbxref=NCBI_GP:RJP84726.1;Name=RJP84726.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359498.1;locus_tag=C5O68_00775;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=RJP84726.1;transl_table=11 PTQV01000002.1 Genbank gene 61675 62586 . - . ID=gene-C5O68_00780;Name=C5O68_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00780 PTQV01000002.1 Protein Homology CDS 61675 62586 . - 0 ID=cds-RJP84727.1;Parent=gene-C5O68_00780;Dbxref=NCBI_GP:RJP84727.1;Name=RJP84727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445312.1;locus_tag=C5O68_00780;product=EamA family transporter;protein_id=RJP84727.1;transl_table=11 PTQV01000002.1 Genbank gene 62669 65143 . - . ID=gene-C5O68_00785;Name=C5O68_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00785 PTQV01000002.1 Protein Homology CDS 62669 65143 . - 0 ID=cds-RJP84728.1;Parent=gene-C5O68_00785;Dbxref=NCBI_GP:RJP84728.1;Name=RJP84728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359500.1;locus_tag=C5O68_00785;product=transglycosylase;protein_id=RJP84728.1;transl_table=11 PTQV01000002.1 Genbank gene 65285 66541 . + . ID=gene-C5O68_00790;Name=C5O68_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00790 PTQV01000002.1 Protein Homology CDS 65285 66541 . + 0 ID=cds-RJP84729.1;Parent=gene-C5O68_00790;Dbxref=NCBI_GP:RJP84729.1;Name=RJP84729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546895.1;locus_tag=C5O68_00790;product=tyrosine--tRNA ligase;protein_id=RJP84729.1;transl_table=11 PTQV01000002.1 Genbank gene 66619 68679 . - . ID=gene-C5O68_00795;Name=C5O68_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00795 PTQV01000002.1 Protein Homology CDS 66619 68679 . - 0 ID=cds-RJP84730.1;Parent=gene-C5O68_00795;Dbxref=NCBI_GP:RJP84730.1;Name=RJP84730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445309.1;locus_tag=C5O68_00795;product=heavy metal translocating P-type ATPase;protein_id=RJP84730.1;transl_table=11 PTQV01000002.1 Genbank gene 68681 68959 . - . ID=gene-C5O68_00800;Name=C5O68_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00800 PTQV01000002.1 Protein Homology CDS 68681 68959 . - 0 ID=cds-RJP84731.1;Parent=gene-C5O68_00800;Dbxref=NCBI_GP:RJP84731.1;Name=RJP84731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445308.1;locus_tag=C5O68_00800;product=hypothetical protein;protein_id=RJP84731.1;transl_table=11 PTQV01000002.1 Genbank gene 69111 69959 . + . ID=gene-C5O68_00805;Name=C5O68_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00805 PTQV01000002.1 Protein Homology CDS 69111 69959 . + 0 ID=cds-RJP84732.1;Parent=gene-C5O68_00805;Dbxref=NCBI_GP:RJP84732.1;Name=RJP84732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359504.1;locus_tag=C5O68_00805;product=methyltransferase domain-containing protein;protein_id=RJP84732.1;transl_table=11 PTQV01000002.1 Genbank gene 70298 70504 . - . ID=gene-C5O68_00810;Name=C5O68_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00810 PTQV01000002.1 Protein Homology CDS 70298 70504 . - 0 ID=cds-RJP84733.1;Parent=gene-C5O68_00810;Dbxref=NCBI_GP:RJP84733.1;Name=RJP84733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359505.1;locus_tag=C5O68_00810;product=hypothetical protein;protein_id=RJP84733.1;transl_table=11 PTQV01000002.1 Genbank gene 70582 71154 . + . ID=gene-C5O68_00815;Name=C5O68_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00815 PTQV01000002.1 Protein Homology CDS 70582 71154 . + 0 ID=cds-RJP84734.1;Parent=gene-C5O68_00815;Dbxref=NCBI_GP:RJP84734.1;Name=RJP84734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359506.1;locus_tag=C5O68_00815;product=hypothetical protein;protein_id=RJP84734.1;transl_table=11 PTQV01000002.1 Genbank gene 72113 72214 . - . ID=gene-C5O68_00820;Name=C5O68_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00820 PTQV01000002.1 Protein Homology CDS 72113 72214 . - 0 ID=cds-RJP84743.1;Parent=gene-C5O68_00820;Dbxref=NCBI_GP:RJP84743.1;Name=RJP84743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_00820;product=DNA alkylation repair protein;protein_id=RJP84743.1;transl_table=11 PTQV01000002.1 Genbank gene 72199 74457 . - . ID=gene-C5O68_00825;Name=C5O68_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00825 PTQV01000002.1 Protein Homology CDS 72199 74457 . - 0 ID=cds-RJP84735.1;Parent=gene-C5O68_00825;Dbxref=NCBI_GP:RJP84735.1;Name=RJP84735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359507.1;locus_tag=C5O68_00825;product=maltose phosphorylase;protein_id=RJP84735.1;transl_table=11 PTQV01000002.1 Genbank gene 74483 76000 . - . ID=gene-C5O68_00830;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=C5O68_00830 PTQV01000002.1 Protein Homology CDS 74483 76000 . - 0 ID=cds-RJP84736.1;Parent=gene-C5O68_00830;Dbxref=NCBI_GP:RJP84736.1;Name=RJP84736.1;gbkey=CDS;gene=malQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445305.1;locus_tag=C5O68_00830;product=4-alpha-glucanotransferase;protein_id=RJP84736.1;transl_table=11 PTQV01000002.1 Genbank gene 76667 77938 . + . ID=gene-C5O68_00835;Name=C5O68_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00835 PTQV01000002.1 Protein Homology CDS 76667 77938 . + 0 ID=cds-RJP84737.1;Parent=gene-C5O68_00835;Dbxref=NCBI_GP:RJP84737.1;Name=RJP84737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359509.1;locus_tag=C5O68_00835;product=sugar ABC transporter substrate-binding protein;protein_id=RJP84737.1;transl_table=11 PTQV01000002.1 Genbank gene 78033 79340 . + . ID=gene-C5O68_00840;Name=C5O68_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00840 PTQV01000002.1 Protein Homology CDS 78033 79340 . + 0 ID=cds-RJP84738.1;Parent=gene-C5O68_00840;Dbxref=NCBI_GP:RJP84738.1;Name=RJP84738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359510.1;locus_tag=C5O68_00840;product=sugar ABC transporter permease;protein_id=RJP84738.1;transl_table=11 PTQV01000002.1 Genbank gene 79342 80184 . + . ID=gene-C5O68_00845;Name=C5O68_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00845 PTQV01000002.1 Protein Homology CDS 79342 80184 . + 0 ID=cds-RJP84739.1;Parent=gene-C5O68_00845;Dbxref=NCBI_GP:RJP84739.1;Name=RJP84739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445302.1;locus_tag=C5O68_00845;product=sugar ABC transporter permease;protein_id=RJP84739.1;transl_table=11 PTQV01000002.1 Genbank gene 80446 81246 . + . ID=gene-C5O68_00850;Name=C5O68_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00850 PTQV01000002.1 Protein Homology CDS 80446 81246 . + 0 ID=cds-RJP84740.1;Parent=gene-C5O68_00850;Dbxref=NCBI_GP:RJP84740.1;Name=RJP84740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359512.1;locus_tag=C5O68_00850;product=DUF1189 domain-containing protein;protein_id=RJP84740.1;transl_table=11 PTQV01000002.1 Genbank gene 81256 82242 . + . ID=gene-C5O68_00855;Name=C5O68_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00855 PTQV01000002.1 Protein Homology CDS 81256 82242 . + 0 ID=cds-RJP84741.1;Parent=gene-C5O68_00855;Dbxref=NCBI_GP:RJP84741.1;Name=RJP84741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359513.1;locus_tag=C5O68_00855;product=LacI family transcriptional regulator;protein_id=RJP84741.1;transl_table=11 PTQV01000002.1 Genbank gene 82383 82574 . + . ID=gene-C5O68_00860;Name=C5O68_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00860 PTQV01000002.1 Protein Homology CDS 82383 82574 . + 0 ID=cds-RJP84744.1;Parent=gene-C5O68_00860;Dbxref=NCBI_GP:RJP84744.1;Name=RJP84744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_00860;product=hypothetical protein;protein_id=RJP84744.1;transl_table=11 ##sequence-region PTQV01000030.1 1 2810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000030.1 Genbank region 1 2810 . + . ID=PTQV01000030.1:1..2810;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000030.1 Genbank gene 1 2810 . + . ID=gene-C5O68_05025;Name=C5O68_05025;end_range=2810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05025;partial=true;start_range=.,1 PTQV01000030.1 GeneMarkS+ CDS 1 2810 . + 0 ID=cds-RJP82709.1;Parent=gene-C5O68_05025;Dbxref=NCBI_GP:RJP82709.1;Name=RJP82709.1;end_range=2810,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_05025;partial=true;product=hypothetical protein;protein_id=RJP82709.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000031.1 1 34352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000031.1 Genbank region 1 34352 . + . ID=PTQV01000031.1:1..34352;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000031.1 Genbank gene 1 271 . + . ID=gene-C5O68_05030;Name=C5O68_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05030;partial=true;start_range=.,1 PTQV01000031.1 Protein Homology CDS 1 271 . + 1 ID=cds-RJP82629.1;Parent=gene-C5O68_05030;Dbxref=NCBI_GP:RJP82629.1;Name=RJP82629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_05030;partial=true;product=IS630 family transposase;protein_id=RJP82629.1;start_range=.,1;transl_table=11 PTQV01000031.1 Genbank gene 388 2367 . + . ID=gene-C5O68_05035;Name=C5O68_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05035 PTQV01000031.1 Protein Homology CDS 388 2367 . + 0 ID=cds-RJP82630.1;Parent=gene-C5O68_05035;Dbxref=NCBI_GP:RJP82630.1;Name=RJP82630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357921.1;locus_tag=C5O68_05035;product=peptide ABC transporter ATP-binding protein;protein_id=RJP82630.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 2486 3833 . + . ID=gene-C5O68_05040;Name=C5O68_05040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05040;pseudo=true PTQV01000031.1 Protein Homology CDS 2486 3833 . + 0 ID=cds-C5O68_05040;Parent=gene-C5O68_05040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=C5O68_05040;product=IS3 family transposase;pseudo=true;transl_table=11 PTQV01000031.1 Genbank gene 3971 6121 . - . ID=gene-C5O68_05045;Name=C5O68_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05045 PTQV01000031.1 Protein Homology CDS 3971 6121 . - 0 ID=cds-RJP82631.1;Parent=gene-C5O68_05045;Dbxref=NCBI_GP:RJP82631.1;Name=RJP82631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446857.1;locus_tag=C5O68_05045;product=penicillin-binding protein;protein_id=RJP82631.1;transl_table=11 PTQV01000031.1 Genbank gene 6118 6714 . - . ID=gene-C5O68_05050;Name=C5O68_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05050 PTQV01000031.1 Protein Homology CDS 6118 6714 . - 0 ID=cds-RJP82632.1;Parent=gene-C5O68_05050;Dbxref=NCBI_GP:RJP82632.1;Name=RJP82632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357924.1;locus_tag=C5O68_05050;product=Holliday junction resolvase RecU;protein_id=RJP82632.1;transl_table=11 PTQV01000031.1 Genbank gene 7142 7522 . + . ID=gene-C5O68_05055;Name=C5O68_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05055 PTQV01000031.1 Protein Homology CDS 7142 7522 . + 0 ID=cds-RJP82633.1;Parent=gene-C5O68_05055;Dbxref=NCBI_GP:RJP82633.1;Name=RJP82633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284930.1;locus_tag=C5O68_05055;product=hypothetical protein;protein_id=RJP82633.1;transl_table=11 PTQV01000031.1 Genbank gene 8280 8864 . - . ID=gene-C5O68_05060;Name=C5O68_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05060 PTQV01000031.1 Protein Homology CDS 8280 8864 . - 0 ID=cds-RJP82634.1;Parent=gene-C5O68_05060;Dbxref=NCBI_GP:RJP82634.1;Name=RJP82634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04892.10;locus_tag=C5O68_05060;product=VanZ family protein;protein_id=RJP82634.1;transl_table=11 PTQV01000031.1 Genbank gene 8932 9459 . + . ID=gene-C5O68_05065;Name=C5O68_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05065 PTQV01000031.1 Protein Homology CDS 8932 9459 . + 0 ID=cds-RJP82635.1;Parent=gene-C5O68_05065;Dbxref=NCBI_GP:RJP82635.1;Name=RJP82635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357925.1;locus_tag=C5O68_05065;product=hypothetical protein;protein_id=RJP82635.1;transl_table=11 PTQV01000031.1 Genbank gene 9529 9870 . + . ID=gene-C5O68_05070;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=C5O68_05070 PTQV01000031.1 Protein Homology CDS 9529 9870 . + 0 ID=cds-RJP82636.1;Parent=gene-C5O68_05070;Dbxref=NCBI_GP:RJP82636.1;Name=RJP82636.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446854.1;locus_tag=C5O68_05070;product=cell division regulator GpsB;protein_id=RJP82636.1;transl_table=11 PTQV01000031.1 Genbank gene 9891 10271 . + . ID=gene-C5O68_05075;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=C5O68_05075 PTQV01000031.1 cmsearch RNase_P_RNA 9891 10271 . + . ID=rna-C5O68_05075;Parent=gene-C5O68_05075;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_05075;product=RNase P RNA component class B PTQV01000031.1 cmsearch exon 9891 10271 . + . ID=exon-C5O68_05075-1;Parent=rna-C5O68_05075;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=C5O68_05075;product=RNase P RNA component class B PTQV01000031.1 Genbank gene 10356 11513 . + . ID=gene-C5O68_05080;Name=C5O68_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05080 PTQV01000031.1 Protein Homology CDS 10356 11513 . + 0 ID=cds-RJP82637.1;Parent=gene-C5O68_05080;Dbxref=NCBI_GP:RJP82637.1;Name=RJP82637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446853.1;locus_tag=C5O68_05080;product=RNA methyltransferase;protein_id=RJP82637.1;transl_table=11 PTQV01000031.1 Genbank gene 11526 12932 . + . ID=gene-C5O68_05085;Name=C5O68_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05085 PTQV01000031.1 Protein Homology CDS 11526 12932 . + 0 ID=cds-RJP82638.1;Parent=gene-C5O68_05085;Dbxref=NCBI_GP:RJP82638.1;Name=RJP82638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357928.1;locus_tag=C5O68_05085;product=Holliday junction resolvase;protein_id=RJP82638.1;transl_table=11 PTQV01000031.1 Genbank gene 13008 14432 . + . ID=gene-C5O68_05090;Name=C5O68_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05090 PTQV01000031.1 Protein Homology CDS 13008 14432 . + 0 ID=cds-RJP82639.1;Parent=gene-C5O68_05090;Dbxref=NCBI_GP:RJP82639.1;Name=RJP82639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185725.1;locus_tag=C5O68_05090;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=RJP82639.1;transl_table=11 PTQV01000031.1 Genbank gene 14444 15133 . + . ID=gene-C5O68_05095;Name=C5O68_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05095 PTQV01000031.1 Protein Homology CDS 14444 15133 . + 0 ID=cds-RJP82640.1;Parent=gene-C5O68_05095;Dbxref=NCBI_GP:RJP82640.1;Name=RJP82640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357930.1;locus_tag=C5O68_05095;product=DNA-binding response regulator;protein_id=RJP82640.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 15203 15289 . - . ID=gene-C5O68_05100;Name=C5O68_05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05100;pseudo=true PTQV01000031.1 Protein Homology CDS 15203 15289 . - 0 ID=cds-C5O68_05100;Parent=gene-C5O68_05100;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002676205.1;locus_tag=C5O68_05100;product=cytidylate kinase;pseudo=true;transl_table=11 PTQV01000031.1 Genbank gene 15360 15656 . + . ID=gene-C5O68_05105;Name=C5O68_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05105 PTQV01000031.1 Protein Homology CDS 15360 15656 . + 0 ID=cds-RJP82641.1;Parent=gene-C5O68_05105;Dbxref=NCBI_GP:RJP82641.1;Name=RJP82641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750729.1;locus_tag=C5O68_05105;product=peptidase;protein_id=RJP82641.1;transl_table=11 PTQV01000031.1 Genbank gene 15669 16628 . + . ID=gene-C5O68_05110;Name=C5O68_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05110 PTQV01000031.1 Protein Homology CDS 15669 16628 . + 0 ID=cds-RJP82642.1;Parent=gene-C5O68_05110;Dbxref=NCBI_GP:RJP82642.1;Name=RJP82642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788364.1;locus_tag=C5O68_05110;product=cell wall-binding protein;protein_id=RJP82642.1;transl_table=11 PTQV01000031.1 Genbank gene 16646 17545 . + . ID=gene-C5O68_05115;Name=C5O68_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05115 PTQV01000031.1 Protein Homology CDS 16646 17545 . + 0 ID=cds-RJP82643.1;Parent=gene-C5O68_05115;Dbxref=NCBI_GP:RJP82643.1;Name=RJP82643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357945.1;locus_tag=C5O68_05115;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=RJP82643.1;transl_table=11 PTQV01000031.1 Genbank gene 17663 18895 . - . ID=gene-C5O68_05120;Name=C5O68_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05120 PTQV01000031.1 Protein Homology CDS 17663 18895 . - 0 ID=cds-RJP82644.1;Parent=gene-C5O68_05120;Dbxref=NCBI_GP:RJP82644.1;Name=RJP82644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000765682.1;locus_tag=C5O68_05120;product=MFS transporter permease;protein_id=RJP82644.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 18938 19345 . - . ID=gene-C5O68_05125;Name=C5O68_05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05125;pseudo=true PTQV01000031.1 Protein Homology CDS 18938 19345 . - 0 ID=cds-C5O68_05125;Parent=gene-C5O68_05125;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499613.1;locus_tag=C5O68_05125;product=lanthionine synthetase;pseudo=true;transl_table=11 PTQV01000031.1 Genbank pseudogene 19413 19750 . - . ID=gene-C5O68_05130;Name=C5O68_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05130;pseudo=true PTQV01000031.1 Protein Homology CDS 19413 19750 . - 0 ID=cds-C5O68_05130;Parent=gene-C5O68_05130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811282.1;locus_tag=C5O68_05130;product=lantibiotic-modifying protein;pseudo=true;transl_table=11 PTQV01000031.1 Genbank pseudogene 19761 19954 . + . ID=gene-C5O68_05135;Name=C5O68_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05135;pseudo=true PTQV01000031.1 Protein Homology CDS 19761 19954 . + 0 ID=cds-C5O68_05135;Parent=gene-C5O68_05135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315043.1;locus_tag=C5O68_05135;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000031.1 Genbank gene 20246 21603 . - . ID=gene-C5O68_05140;Name=C5O68_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05140 PTQV01000031.1 Protein Homology CDS 21162 21603 . - 0 ID=cds-RJP82645.1;Parent=gene-C5O68_05140;Dbxref=NCBI_GP:RJP82645.1;Name=RJP82645.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=C5O68_05140;product=IS3 family transposase;protein_id=RJP82645.1;transl_table=11 PTQV01000031.1 Protein Homology CDS 20246 21162 . - 2 ID=cds-RJP82645.1;Parent=gene-C5O68_05140;Dbxref=NCBI_GP:RJP82645.1;Name=RJP82645.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611512.1;locus_tag=C5O68_05140;product=IS3 family transposase;protein_id=RJP82645.1;transl_table=11 PTQV01000031.1 Genbank gene 21750 22751 . - . ID=gene-C5O68_05145;Name=C5O68_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05145 PTQV01000031.1 Protein Homology CDS 21750 22751 . - 0 ID=cds-RJP82646.1;Parent=gene-C5O68_05145;Dbxref=NCBI_GP:RJP82646.1;Name=RJP82646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446456.1;locus_tag=C5O68_05145;product=choline-binding protein;protein_id=RJP82646.1;transl_table=11 PTQV01000031.1 Genbank gene 22769 24097 . - . ID=gene-C5O68_05150;Name=C5O68_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05150 PTQV01000031.1 Protein Homology CDS 22769 24097 . - 0 ID=cds-RJP82647.1;Parent=gene-C5O68_05150;Dbxref=NCBI_GP:RJP82647.1;Name=RJP82647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750730.1;locus_tag=C5O68_05150;product=choline-binding protein G;protein_id=RJP82647.1;transl_table=11 PTQV01000031.1 Genbank gene 24239 24736 . - . ID=gene-C5O68_05155;Name=C5O68_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05155 PTQV01000031.1 Protein Homology CDS 24239 24736 . - 0 ID=cds-RJP82648.1;Parent=gene-C5O68_05155;Dbxref=NCBI_GP:RJP82648.1;Name=RJP82648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446841.1;locus_tag=C5O68_05155;product=DNA alkylation repair protein;protein_id=RJP82648.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 24661 24901 . - . ID=gene-C5O68_05160;Name=C5O68_05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05160;pseudo=true PTQV01000031.1 Protein Homology CDS 24661 24901 . - 0 ID=cds-C5O68_05160;Parent=gene-C5O68_05160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812384.1;locus_tag=C5O68_05160;product=DNA alkylation repair protein;pseudo=true;transl_table=11 PTQV01000031.1 Genbank gene 24902 25534 . - . ID=gene-C5O68_05165;Name=C5O68_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05165 PTQV01000031.1 Protein Homology CDS 24902 25534 . - 0 ID=cds-RJP82649.1;Parent=gene-C5O68_05165;Dbxref=NCBI_GP:RJP82649.1;Name=RJP82649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446842.1;locus_tag=C5O68_05165;product=DNA-binding response regulator;protein_id=RJP82649.1;transl_table=11 PTQV01000031.1 Genbank gene 25548 26543 . - . ID=gene-C5O68_05170;Name=C5O68_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05170 PTQV01000031.1 Protein Homology CDS 25548 26543 . - 0 ID=cds-RJP82650.1;Parent=gene-C5O68_05170;Dbxref=NCBI_GP:RJP82650.1;Name=RJP82650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357937.1;locus_tag=C5O68_05170;product=sensor histidine kinase;protein_id=RJP82650.1;transl_table=11 PTQV01000031.1 Genbank gene 26540 27238 . - . ID=gene-C5O68_05175;Name=C5O68_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05175 PTQV01000031.1 Protein Homology CDS 26540 27238 . - 0 ID=cds-RJP82651.1;Parent=gene-C5O68_05175;Dbxref=NCBI_GP:RJP82651.1;Name=RJP82651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446844.1;locus_tag=C5O68_05175;product=transporter;protein_id=RJP82651.1;transl_table=11 PTQV01000031.1 Genbank gene 27315 28325 . - . ID=gene-C5O68_05180;Name=C5O68_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05180 PTQV01000031.1 Protein Homology CDS 27315 28325 . - 0 ID=cds-RJP82652.1;Parent=gene-C5O68_05180;Dbxref=NCBI_GP:RJP82652.1;Name=RJP82652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357935.1;locus_tag=C5O68_05180;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=RJP82652.1;transl_table=11 PTQV01000031.1 Genbank gene 28309 29316 . - . ID=gene-C5O68_05185;Name=C5O68_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05185 PTQV01000031.1 Protein Homology CDS 28309 29316 . - 0 ID=cds-RJP82653.1;Parent=gene-C5O68_05185;Dbxref=NCBI_GP:RJP82653.1;Name=RJP82653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446846.1;locus_tag=C5O68_05185;product=phosphomevalonate kinase;protein_id=RJP82653.1;transl_table=11 PTQV01000031.1 Genbank gene 29303 30256 . - . ID=gene-C5O68_05190;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=C5O68_05190 PTQV01000031.1 Protein Homology CDS 29303 30256 . - 0 ID=cds-RJP82654.1;Parent=gene-C5O68_05190;Dbxref=NCBI_GP:RJP82654.1;Name=RJP82654.1;gbkey=CDS;gene=mvaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446847.1;locus_tag=C5O68_05190;product=diphosphomevalonate decarboxylase;protein_id=RJP82654.1;transl_table=11 PTQV01000031.1 Genbank gene 30238 31116 . - . ID=gene-C5O68_05195;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=C5O68_05195 PTQV01000031.1 Protein Homology CDS 30238 31116 . - 0 ID=cds-RJP82655.1;Parent=gene-C5O68_05195;Dbxref=NCBI_GP:RJP82655.1;Name=RJP82655.1;gbkey=CDS;gene=mvk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357932.1;locus_tag=C5O68_05195;product=mevalonate kinase;protein_id=RJP82655.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 31238 31518 . - . ID=gene-C5O68_05200;Name=C5O68_05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05200;pseudo=true PTQV01000031.1 Protein Homology CDS 31238 31518 . - 0 ID=cds-C5O68_05200;Parent=gene-C5O68_05200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001855238.1;locus_tag=C5O68_05200;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000031.1 Genbank pseudogene 31519 32307 . - . ID=gene-C5O68_05205;Name=C5O68_05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05205;pseudo=true PTQV01000031.1 Protein Homology CDS 31519 32307 . - 0 ID=cds-C5O68_05205;Parent=gene-C5O68_05205;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=C5O68_05205;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000031.1 Genbank gene 32695 33888 . + . ID=gene-C5O68_05210;Name=C5O68_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05210 PTQV01000031.1 Protein Homology CDS 32695 33888 . + 0 ID=cds-RJP82656.1;Parent=gene-C5O68_05210;Dbxref=NCBI_GP:RJP82656.1;Name=RJP82656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359300.1;locus_tag=C5O68_05210;product=O-antigen ligase family protein;protein_id=RJP82656.1;transl_table=11 PTQV01000031.1 Genbank pseudogene 34112 34276 . + . ID=gene-C5O68_05215;Name=C5O68_05215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05215;pseudo=true PTQV01000031.1 Protein Homology CDS 34112 34276 . + 0 ID=cds-C5O68_05215;Parent=gene-C5O68_05215;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514203.1;locus_tag=C5O68_05215;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000032.1 1 65636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000032.1 Genbank region 1 65636 . + . ID=PTQV01000032.1:1..65636;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000032.1 Genbank gene 1 345 . - . ID=gene-C5O68_05220;Name=C5O68_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05220;partial=true;start_range=.,1 PTQV01000032.1 Protein Homology CDS 1 345 . - 0 ID=cds-RJP82492.1;Parent=gene-C5O68_05220;Dbxref=NCBI_GP:RJP82492.1;Name=RJP82492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358799.1;locus_tag=C5O68_05220;partial=true;product=CPBP family intramembrane metalloprotease;protein_id=RJP82492.1;start_range=.,1;transl_table=11 PTQV01000032.1 Genbank gene 594 974 . - . ID=gene-C5O68_05225;Name=C5O68_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05225 PTQV01000032.1 Protein Homology CDS 594 974 . - 0 ID=cds-RJP82493.1;Parent=gene-C5O68_05225;Dbxref=NCBI_GP:RJP82493.1;Name=RJP82493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358800.1;locus_tag=C5O68_05225;product=hypothetical protein;protein_id=RJP82493.1;transl_table=11 PTQV01000032.1 Genbank gene 967 1218 . - . ID=gene-C5O68_05230;Name=C5O68_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05230 PTQV01000032.1 Protein Homology CDS 967 1218 . - 0 ID=cds-RJP82494.1;Parent=gene-C5O68_05230;Dbxref=NCBI_GP:RJP82494.1;Name=RJP82494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813055.1;locus_tag=C5O68_05230;product=hypothetical protein;protein_id=RJP82494.1;transl_table=11 PTQV01000032.1 Genbank gene 1298 1486 . - . ID=gene-C5O68_05235;Name=C5O68_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05235 PTQV01000032.1 Protein Homology CDS 1298 1486 . - 0 ID=cds-RJP82495.1;Parent=gene-C5O68_05235;Dbxref=NCBI_GP:RJP82495.1;Name=RJP82495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358802.1;locus_tag=C5O68_05235;product=replication initiation protein;protein_id=RJP82495.1;transl_table=11 PTQV01000032.1 Genbank gene 1483 1656 . - . ID=gene-C5O68_05240;Name=C5O68_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05240 PTQV01000032.1 Protein Homology CDS 1483 1656 . - 0 ID=cds-RJP82496.1;Parent=gene-C5O68_05240;Dbxref=NCBI_GP:RJP82496.1;Name=RJP82496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028217.1;locus_tag=C5O68_05240;product=hypothetical protein;protein_id=RJP82496.1;transl_table=11 PTQV01000032.1 Genbank gene 1843 2211 . - . ID=gene-C5O68_05245;Name=C5O68_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05245 PTQV01000032.1 Protein Homology CDS 1843 2211 . - 0 ID=cds-RJP82497.1;Parent=gene-C5O68_05245;Dbxref=NCBI_GP:RJP82497.1;Name=RJP82497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371186.1;locus_tag=C5O68_05245;product=50S ribosomal protein L7/L12;protein_id=RJP82497.1;transl_table=11 PTQV01000032.1 Genbank gene 2287 2787 . - . ID=gene-C5O68_05250;Name=C5O68_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05250 PTQV01000032.1 Protein Homology CDS 2287 2787 . - 0 ID=cds-RJP82498.1;Parent=gene-C5O68_05250;Dbxref=NCBI_GP:RJP82498.1;Name=RJP82498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287276.1;locus_tag=C5O68_05250;product=50S ribosomal protein L10;protein_id=RJP82498.1;transl_table=11 PTQV01000032.1 Genbank pseudogene 2792 2977 . + . ID=gene-C5O68_05255;Name=C5O68_05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05255;pseudo=true PTQV01000032.1 Protein Homology CDS 2792 2977 . + 0 ID=cds-C5O68_05255;Parent=gene-C5O68_05255;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010976551.1;locus_tag=C5O68_05255;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000032.1 Genbank gene 3037 4353 . - . ID=gene-C5O68_05260;Name=C5O68_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05260 PTQV01000032.1 Protein Homology CDS 3037 4353 . - 0 ID=cds-RJP82557.1;Parent=gene-C5O68_05260;Dbxref=NCBI_GP:RJP82557.1;Name=RJP82557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358807.2;locus_tag=C5O68_05260;product=TRZ/ATZ family protein;protein_id=RJP82557.1;transl_table=11 PTQV01000032.1 Genbank gene 4823 6571 . - . ID=gene-C5O68_05265;Name=C5O68_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05265 PTQV01000032.1 Protein Homology CDS 4823 6571 . - 0 ID=cds-RJP82499.1;Parent=gene-C5O68_05265;Dbxref=NCBI_GP:RJP82499.1;Name=RJP82499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445892.1;locus_tag=C5O68_05265;product=ABC transporter ATP-binding protein;protein_id=RJP82499.1;transl_table=11 PTQV01000032.1 Genbank gene 6573 8297 . - . ID=gene-C5O68_05270;Name=C5O68_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05270 PTQV01000032.1 Protein Homology CDS 6573 8297 . - 0 ID=cds-RJP82500.1;Parent=gene-C5O68_05270;Dbxref=NCBI_GP:RJP82500.1;Name=RJP82500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358809.1;locus_tag=C5O68_05270;product=ABC transporter ATP-binding protein;protein_id=RJP82500.1;transl_table=11 PTQV01000032.1 Genbank gene 8355 9293 . - . ID=gene-C5O68_05275;Name=C5O68_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05275 PTQV01000032.1 Protein Homology CDS 8355 9293 . - 0 ID=cds-RJP82501.1;Parent=gene-C5O68_05275;Dbxref=NCBI_GP:RJP82501.1;Name=RJP82501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358810.1;locus_tag=C5O68_05275;product=peptide methionine sulfoxide reductase MsrA/MsrB 1;protein_id=RJP82501.1;transl_table=11 PTQV01000032.1 Genbank pseudogene 9322 9512 . - . ID=gene-C5O68_05280;Name=C5O68_05280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05280;pseudo=true PTQV01000032.1 Protein Homology CDS 9322 9512 . - 0 ID=cds-C5O68_05280;Parent=gene-C5O68_05280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_05280;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000032.1 Genbank gene 9588 10457 . - . ID=gene-C5O68_05285;Name=C5O68_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05285 PTQV01000032.1 Protein Homology CDS 9588 10457 . - 0 ID=cds-RJP82502.1;Parent=gene-C5O68_05285;Dbxref=NCBI_GP:RJP82502.1;Name=RJP82502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358811.1;locus_tag=C5O68_05285;product=homoserine kinase;protein_id=RJP82502.1;transl_table=11 PTQV01000032.1 Genbank gene 10459 11745 . - . ID=gene-C5O68_05290;Name=C5O68_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05290 PTQV01000032.1 Protein Homology CDS 10459 11745 . - 0 ID=cds-RJP82503.1;Parent=gene-C5O68_05290;Dbxref=NCBI_GP:RJP82503.1;Name=RJP82503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358812.2;locus_tag=C5O68_05290;product=homoserine dehydrogenase;protein_id=RJP82503.1;transl_table=11 PTQV01000032.1 Genbank gene 11896 12633 . - . ID=gene-C5O68_05295;Name=C5O68_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05295 PTQV01000032.1 Protein Homology CDS 11896 12633 . - 0 ID=cds-RJP82504.1;Parent=gene-C5O68_05295;Dbxref=NCBI_GP:RJP82504.1;Name=RJP82504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358813.1;locus_tag=C5O68_05295;product=adaptor protein MecA;protein_id=RJP82504.1;transl_table=11 PTQV01000032.1 Genbank gene 12833 13867 . - . ID=gene-C5O68_05300;Name=C5O68_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05300 PTQV01000032.1 Protein Homology CDS 12833 13867 . - 0 ID=cds-RJP82505.1;Parent=gene-C5O68_05300;Dbxref=NCBI_GP:RJP82505.1;Name=RJP82505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358814.1;locus_tag=C5O68_05300;product=prephenate dehydratase;protein_id=RJP82505.1;transl_table=11 PTQV01000032.1 Genbank gene 13896 15329 . - . ID=gene-C5O68_05305;Name=C5O68_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05305 PTQV01000032.1 Protein Homology CDS 13896 15329 . - 0 ID=cds-RJP82506.1;Parent=gene-C5O68_05305;Dbxref=NCBI_GP:RJP82506.1;Name=RJP82506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358815.1;locus_tag=C5O68_05305;product=oligosaccharide repeat unit polymerase;protein_id=RJP82506.1;transl_table=11 PTQV01000032.1 Genbank gene 15345 16331 . - . ID=gene-C5O68_05310;Name=C5O68_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05310 PTQV01000032.1 Protein Homology CDS 15345 16331 . - 0 ID=cds-RJP82507.1;Parent=gene-C5O68_05310;Dbxref=NCBI_GP:RJP82507.1;Name=RJP82507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358816.1;locus_tag=C5O68_05310;product=glycosyltransferase family 2 protein;protein_id=RJP82507.1;transl_table=11 PTQV01000032.1 Genbank gene 16333 17490 . - . ID=gene-C5O68_05315;Name=C5O68_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05315 PTQV01000032.1 Protein Homology CDS 16333 17490 . - 0 ID=cds-RJP82508.1;Parent=gene-C5O68_05315;Dbxref=NCBI_GP:RJP82508.1;Name=RJP82508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358817.1;locus_tag=C5O68_05315;product=glycosyltransferase;protein_id=RJP82508.1;transl_table=11 PTQV01000032.1 Genbank gene 17426 18271 . - . ID=gene-C5O68_05320;Name=C5O68_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05320 PTQV01000032.1 Protein Homology CDS 17426 18271 . - 0 ID=cds-RJP82509.1;Parent=gene-C5O68_05320;Dbxref=NCBI_GP:RJP82509.1;Name=RJP82509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358818.1;locus_tag=C5O68_05320;product=phosphorylcholine transferase LicD;protein_id=RJP82509.1;transl_table=11 PTQV01000032.1 Genbank gene 18550 19824 . - . ID=gene-C5O68_05325;Name=C5O68_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05325 PTQV01000032.1 Protein Homology CDS 18550 19824 . - 0 ID=cds-RJP82510.1;Parent=gene-C5O68_05325;Dbxref=NCBI_GP:RJP82510.1;Name=RJP82510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358819.1;locus_tag=C5O68_05325;product=LytR family transcriptional regulator;protein_id=RJP82510.1;transl_table=11 PTQV01000032.1 Genbank gene 19821 20669 . - . ID=gene-C5O68_05330;Name=C5O68_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05330 PTQV01000032.1 Protein Homology CDS 19821 20669 . - 0 ID=cds-RJP82511.1;Parent=gene-C5O68_05330;Dbxref=NCBI_GP:RJP82511.1;Name=RJP82511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358820.1;locus_tag=C5O68_05330;product=prephenate dehydratase;protein_id=RJP82511.1;transl_table=11 PTQV01000032.1 Genbank gene 20666 21142 . - . ID=gene-C5O68_05335;Name=C5O68_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05335 PTQV01000032.1 Protein Homology CDS 20666 21142 . - 0 ID=cds-RJP82512.1;Parent=gene-C5O68_05335;Dbxref=NCBI_GP:RJP82512.1;Name=RJP82512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358821.1;locus_tag=C5O68_05335;product=shikimate kinase;protein_id=RJP82512.1;transl_table=11 PTQV01000032.1 Genbank gene 21135 22418 . - . ID=gene-C5O68_05340;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=C5O68_05340 PTQV01000032.1 Protein Homology CDS 21135 22418 . - 0 ID=cds-RJP82513.1;Parent=gene-C5O68_05340;Dbxref=NCBI_GP:RJP82513.1;Name=RJP82513.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445878.1;locus_tag=C5O68_05340;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=RJP82513.1;transl_table=11 PTQV01000032.1 Genbank gene 22510 22848 . - . ID=gene-C5O68_05345;Name=C5O68_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05345 PTQV01000032.1 Protein Homology CDS 22510 22848 . - 0 ID=cds-RJP82514.1;Parent=gene-C5O68_05345;Dbxref=NCBI_GP:RJP82514.1;Name=RJP82514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358823.1;locus_tag=C5O68_05345;product=YlbF/YmcA family competence regulator;protein_id=RJP82514.1;transl_table=11 PTQV01000032.1 Genbank gene 22859 23962 . - . ID=gene-C5O68_05350;Name=C5O68_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05350 PTQV01000032.1 Protein Homology CDS 22859 23962 . - 0 ID=cds-RJP82515.1;Parent=gene-C5O68_05350;Dbxref=NCBI_GP:RJP82515.1;Name=RJP82515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358824.1;locus_tag=C5O68_05350;product=prephenate dehydrogenase;protein_id=RJP82515.1;transl_table=11 PTQV01000032.1 Genbank gene 23972 25138 . - . ID=gene-C5O68_05355;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=C5O68_05355 PTQV01000032.1 Protein Homology CDS 23972 25138 . - 0 ID=cds-RJP82516.1;Parent=gene-C5O68_05355;Dbxref=NCBI_GP:RJP82516.1;Name=RJP82516.1;gbkey=CDS;gene=aroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358825.1;locus_tag=C5O68_05355;product=chorismate synthase;protein_id=RJP82516.1;transl_table=11 PTQV01000032.1 Genbank gene 25148 26215 . - . ID=gene-C5O68_05360;Name=C5O68_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05360 PTQV01000032.1 Protein Homology CDS 25148 26215 . - 0 ID=cds-RJP82517.1;Parent=gene-C5O68_05360;Dbxref=NCBI_GP:RJP82517.1;Name=RJP82517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358826.1;locus_tag=C5O68_05360;product=3-dehydroquinate synthase;protein_id=RJP82517.1;transl_table=11 PTQV01000032.1 Genbank gene 26234 27088 . - . ID=gene-C5O68_05365;Name=C5O68_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05365 PTQV01000032.1 Protein Homology CDS 26234 27088 . - 0 ID=cds-RJP82518.1;Parent=gene-C5O68_05365;Dbxref=NCBI_GP:RJP82518.1;Name=RJP82518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358827.1;locus_tag=C5O68_05365;product=shikimate dehydrogenase;protein_id=RJP82518.1;transl_table=11 PTQV01000032.1 Genbank gene 27078 27755 . - . ID=gene-C5O68_05370;Name=C5O68_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05370 PTQV01000032.1 Protein Homology CDS 27078 27755 . - 0 ID=cds-RJP82519.1;Parent=gene-C5O68_05370;Dbxref=NCBI_GP:RJP82519.1;Name=RJP82519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358828.1;locus_tag=C5O68_05370;product=type I 3-dehydroquinate dehydratase;protein_id=RJP82519.1;transl_table=11 PTQV01000032.1 Genbank gene 27752 28924 . - . ID=gene-C5O68_05375;Name=C5O68_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05375 PTQV01000032.1 Protein Homology CDS 27752 28924 . - 0 ID=cds-RJP82520.1;Parent=gene-C5O68_05375;Dbxref=NCBI_GP:RJP82520.1;Name=RJP82520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358829.1;locus_tag=C5O68_05375;product=RlmI/RlmK family 23S rRNA methyltransferase;protein_id=RJP82520.1;transl_table=11 PTQV01000032.1 Genbank gene 29032 31182 . + . ID=gene-C5O68_05380;Name=C5O68_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05380 PTQV01000032.1 Protein Homology CDS 29032 31182 . + 0 ID=cds-RJP82521.1;Parent=gene-C5O68_05380;Dbxref=NCBI_GP:RJP82521.1;Name=RJP82521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445868.1;locus_tag=C5O68_05380;product=alkaline phosphatase;protein_id=RJP82521.1;transl_table=11 PTQV01000032.1 Genbank gene 31198 31413 . + . ID=gene-C5O68_05385;Name=C5O68_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05385 PTQV01000032.1 Protein Homology CDS 31198 31413 . + 0 ID=cds-RJP82522.1;Parent=gene-C5O68_05385;Dbxref=NCBI_GP:RJP82522.1;Name=RJP82522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1%2CRefSeq:WP_001842220.1;locus_tag=C5O68_05385;product=hypothetical protein;protein_id=RJP82522.1;transl_table=11 PTQV01000032.1 Genbank gene 31551 31769 . - . ID=gene-C5O68_05390;Name=C5O68_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05390 PTQV01000032.1 Protein Homology CDS 31551 31769 . - 0 ID=cds-RJP82523.1;Parent=gene-C5O68_05390;Dbxref=NCBI_GP:RJP82523.1;Name=RJP82523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001814541.1;locus_tag=C5O68_05390;product=hypothetical protein;protein_id=RJP82523.1;transl_table=11 PTQV01000032.1 Genbank gene 31881 33515 . - . ID=gene-C5O68_05395;Name=C5O68_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05395 PTQV01000032.1 Protein Homology CDS 31881 33515 . - 0 ID=cds-RJP82524.1;Parent=gene-C5O68_05395;Dbxref=NCBI_GP:RJP82524.1;Name=RJP82524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445867.1;locus_tag=C5O68_05395;product=hypothetical protein;protein_id=RJP82524.1;transl_table=11 PTQV01000032.1 Genbank gene 33496 34245 . - . ID=gene-C5O68_05400;Name=C5O68_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05400 PTQV01000032.1 Protein Homology CDS 33496 34245 . - 0 ID=cds-RJP82525.1;Parent=gene-C5O68_05400;Dbxref=NCBI_GP:RJP82525.1;Name=RJP82525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445866.1;locus_tag=C5O68_05400;product=ABC transporter ATP-binding protein;protein_id=RJP82525.1;transl_table=11 PTQV01000032.1 Genbank gene 34425 35879 . + . ID=gene-C5O68_05405;Name=C5O68_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05405 PTQV01000032.1 Protein Homology CDS 34425 35879 . + 0 ID=cds-RJP82526.1;Parent=gene-C5O68_05405;Dbxref=NCBI_GP:RJP82526.1;Name=RJP82526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445865.1;locus_tag=C5O68_05405;product=alpha-amylase;protein_id=RJP82526.1;transl_table=11 PTQV01000032.1 Genbank gene 35970 38588 . - . ID=gene-C5O68_05410;Name=C5O68_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05410 PTQV01000032.1 Protein Homology CDS 35970 38588 . - 0 ID=cds-RJP82527.1;Parent=gene-C5O68_05410;Dbxref=NCBI_GP:RJP82527.1;Name=RJP82527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445864.1;locus_tag=C5O68_05410;product=alanine--tRNA ligase;protein_id=RJP82527.1;transl_table=11 PTQV01000032.1 Genbank gene 38610 39095 . - . ID=gene-C5O68_05415;Name=C5O68_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05415 PTQV01000032.1 Protein Homology CDS 38610 39095 . - 0 ID=cds-RJP82528.1;Parent=gene-C5O68_05415;Dbxref=NCBI_GP:RJP82528.1;Name=RJP82528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445863.1;locus_tag=C5O68_05415;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=RJP82528.1;transl_table=11 PTQV01000032.1 Genbank gene 39608 40141 . - . ID=gene-C5O68_05420;Name=C5O68_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05420 PTQV01000032.1 GeneMarkS+ CDS 39608 40141 . - 0 ID=cds-RJP82529.1;Parent=gene-C5O68_05420;Dbxref=NCBI_GP:RJP82529.1;Name=RJP82529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_05420;product=hypothetical protein;protein_id=RJP82529.1;transl_table=11 PTQV01000032.1 Genbank gene 40294 41364 . - . ID=gene-C5O68_05425;Name=C5O68_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05425 PTQV01000032.1 Protein Homology CDS 40294 41364 . - 0 ID=cds-RJP82530.1;Parent=gene-C5O68_05425;Dbxref=NCBI_GP:RJP82530.1;Name=RJP82530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445861.1;locus_tag=C5O68_05425;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=RJP82530.1;transl_table=11 PTQV01000032.1 Genbank gene 41361 42134 . - . ID=gene-C5O68_05430;Name=C5O68_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05430 PTQV01000032.1 Protein Homology CDS 41361 42134 . - 0 ID=cds-RJP82531.1;Parent=gene-C5O68_05430;Dbxref=NCBI_GP:RJP82531.1;Name=RJP82531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445860.1;locus_tag=C5O68_05430;product=ABC transporter permease;protein_id=RJP82531.1;transl_table=11 PTQV01000032.1 Genbank gene 42131 42937 . - . ID=gene-C5O68_05435;Name=C5O68_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05435 PTQV01000032.1 Protein Homology CDS 42131 42937 . - 0 ID=cds-RJP82532.1;Parent=gene-C5O68_05435;Dbxref=NCBI_GP:RJP82532.1;Name=RJP82532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445859.1;locus_tag=C5O68_05435;product=ABC transporter permease;protein_id=RJP82532.1;transl_table=11 PTQV01000032.1 Genbank gene 42918 44075 . - . ID=gene-C5O68_05440;Name=C5O68_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05440 PTQV01000032.1 Protein Homology CDS 42918 44075 . - 0 ID=cds-RJP82533.1;Parent=gene-C5O68_05440;Dbxref=NCBI_GP:RJP82533.1;Name=RJP82533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358839.1;locus_tag=C5O68_05440;product=ABC transporter ATP-binding protein;protein_id=RJP82533.1;transl_table=11 PTQV01000032.1 Genbank gene 44235 45140 . - . ID=gene-C5O68_05445;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=C5O68_05445 PTQV01000032.1 Protein Homology CDS 44235 45140 . - 0 ID=cds-RJP82534.1;Parent=gene-C5O68_05445;Dbxref=NCBI_GP:RJP82534.1;Name=RJP82534.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445857.1;locus_tag=C5O68_05445;product=UDP-N-acetylmuramate dehydrogenase;protein_id=RJP82534.1;transl_table=11 PTQV01000032.1 Genbank gene 45256 46008 . - . ID=gene-C5O68_05450;Name=C5O68_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05450 PTQV01000032.1 Protein Homology CDS 45256 46008 . - 0 ID=cds-RJP82535.1;Parent=gene-C5O68_05450;Dbxref=NCBI_GP:RJP82535.1;Name=RJP82535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358841.1;locus_tag=C5O68_05450;product=YhfC family intramembrane metalloprotease;protein_id=RJP82535.1;transl_table=11 PTQV01000032.1 Genbank gene 46018 46749 . - . ID=gene-C5O68_05455;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=C5O68_05455 PTQV01000032.1 Protein Homology CDS 46018 46749 . - 0 ID=cds-RJP82536.1;Parent=gene-C5O68_05455;Dbxref=NCBI_GP:RJP82536.1;Name=RJP82536.1;gbkey=CDS;gene=budA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358842.1;locus_tag=C5O68_05455;product=acetolactate decarboxylase;protein_id=RJP82536.1;transl_table=11 PTQV01000032.1 Genbank pseudogene 47233 47754 . - . ID=gene-C5O68_05460;Name=C5O68_05460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05460;pseudo=true PTQV01000032.1 Protein Homology CDS 47233 47754 . - 0 ID=cds-C5O68_05460;Parent=gene-C5O68_05460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669430.1;locus_tag=C5O68_05460;product=streptococcin A-M57;pseudo=true;transl_table=11 PTQV01000032.1 Genbank gene 48171 49442 . + . ID=gene-C5O68_05465;Name=C5O68_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05465 PTQV01000032.1 Protein Homology CDS 48171 49442 . + 0 ID=cds-RJP82537.1;Parent=gene-C5O68_05465;Dbxref=NCBI_GP:RJP82537.1;Name=RJP82537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445854.1;locus_tag=C5O68_05465;product=PLP-dependent aminotransferase family protein;protein_id=RJP82537.1;transl_table=11 PTQV01000032.1 Genbank gene 49464 50279 . - . ID=gene-C5O68_05470;Name=C5O68_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05470 PTQV01000032.1 Protein Homology CDS 49464 50279 . - 0 ID=cds-RJP82538.1;Parent=gene-C5O68_05470;Dbxref=NCBI_GP:RJP82538.1;Name=RJP82538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358844.1;locus_tag=C5O68_05470;product=amino acid ABC transporter substrate-binding protein;protein_id=RJP82538.1;transl_table=11 PTQV01000032.1 Genbank gene 50399 50881 . - . ID=gene-C5O68_05475;Name=C5O68_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05475 PTQV01000032.1 Protein Homology CDS 50399 50881 . - 0 ID=cds-RJP82539.1;Parent=gene-C5O68_05475;Dbxref=NCBI_GP:RJP82539.1;Name=RJP82539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005727.1;locus_tag=C5O68_05475;product=NUDIX domain-containing protein;protein_id=RJP82539.1;transl_table=11 PTQV01000032.1 Genbank gene 50996 51649 . - . ID=gene-C5O68_05480;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=C5O68_05480 PTQV01000032.1 Protein Homology CDS 50996 51649 . - 0 ID=cds-RJP82540.1;Parent=gene-C5O68_05480;Dbxref=NCBI_GP:RJP82540.1;Name=RJP82540.1;gbkey=CDS;gene=phoU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358845.1;locus_tag=C5O68_05480;product=phosphate transport system regulatory protein PhoU;protein_id=RJP82540.1;transl_table=11 PTQV01000032.1 Genbank gene 51661 52419 . - . ID=gene-C5O68_05485;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C5O68_05485 PTQV01000032.1 Protein Homology CDS 51661 52419 . - 0 ID=cds-RJP82541.1;Parent=gene-C5O68_05485;Dbxref=NCBI_GP:RJP82541.1;Name=RJP82541.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358846.1;locus_tag=C5O68_05485;product=phosphate ABC transporter ATP-binding protein;protein_id=RJP82541.1;transl_table=11 PTQV01000032.1 Genbank gene 52432 53235 . - . ID=gene-C5O68_05490;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=C5O68_05490 PTQV01000032.1 Protein Homology CDS 52432 53235 . - 0 ID=cds-RJP82542.1;Parent=gene-C5O68_05490;Dbxref=NCBI_GP:RJP82542.1;Name=RJP82542.1;gbkey=CDS;gene=pstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358847.1;locus_tag=C5O68_05490;product=phosphate ABC transporter ATP-binding protein;protein_id=RJP82542.1;transl_table=11 PTQV01000032.1 Genbank gene 53246 54130 . - . ID=gene-C5O68_05495;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=C5O68_05495 PTQV01000032.1 Protein Homology CDS 53246 54130 . - 0 ID=cds-RJP82543.1;Parent=gene-C5O68_05495;Dbxref=NCBI_GP:RJP82543.1;Name=RJP82543.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001201787.1;locus_tag=C5O68_05495;product=phosphate ABC transporter permease PtsA;protein_id=RJP82543.1;transl_table=11 PTQV01000032.1 Genbank gene 54120 55037 . - . ID=gene-C5O68_05500;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=C5O68_05500 PTQV01000032.1 Protein Homology CDS 54120 55037 . - 0 ID=cds-RJP82544.1;Parent=gene-C5O68_05500;Dbxref=NCBI_GP:RJP82544.1;Name=RJP82544.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358849.1;locus_tag=C5O68_05500;product=phosphate ABC transporter permease subunit PstC;protein_id=RJP82544.1;transl_table=11 PTQV01000032.1 Genbank gene 55037 55915 . - . ID=gene-C5O68_05505;Name=C5O68_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05505 PTQV01000032.1 Protein Homology CDS 55037 55915 . - 0 ID=cds-RJP82545.1;Parent=gene-C5O68_05505;Dbxref=NCBI_GP:RJP82545.1;Name=RJP82545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358850.1;locus_tag=C5O68_05505;product=phosphate-binding protein;protein_id=RJP82545.1;transl_table=11 PTQV01000032.1 Genbank pseudogene 56289 56421 . - . ID=gene-C5O68_05510;Name=C5O68_05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05510;pseudo=true PTQV01000032.1 Protein Homology CDS 56289 56421 . - 0 ID=cds-C5O68_05510;Parent=gene-C5O68_05510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829019.1;locus_tag=C5O68_05510;product=lysyl-tRNA synthetase;pseudo=true;transl_table=11 PTQV01000032.1 Genbank gene 56601 57905 . - . ID=gene-C5O68_05515;Name=C5O68_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05515 PTQV01000032.1 Protein Homology CDS 56601 57905 . - 0 ID=cds-RJP82546.1;Parent=gene-C5O68_05515;Dbxref=NCBI_GP:RJP82546.1;Name=RJP82546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445846.1;locus_tag=C5O68_05515;product=23S rRNA methyltransferase;protein_id=RJP82546.1;transl_table=11 PTQV01000032.1 Genbank gene 57906 58679 . - . ID=gene-C5O68_05520;Name=C5O68_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05520 PTQV01000032.1 Protein Homology CDS 57906 58679 . - 0 ID=cds-RJP82547.1;Parent=gene-C5O68_05520;Dbxref=NCBI_GP:RJP82547.1;Name=RJP82547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445845.1;locus_tag=C5O68_05520;product=inositol monophosphatase family protein;protein_id=RJP82547.1;transl_table=11 PTQV01000032.1 Genbank gene 58669 58947 . - . ID=gene-C5O68_05525;Name=C5O68_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05525 PTQV01000032.1 Protein Homology CDS 58669 58947 . - 0 ID=cds-RJP82548.1;Parent=gene-C5O68_05525;Dbxref=NCBI_GP:RJP82548.1;Name=RJP82548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358854.1;locus_tag=C5O68_05525;product=hypothetical protein;protein_id=RJP82548.1;transl_table=11 PTQV01000032.1 Genbank gene 58947 59348 . - . ID=gene-C5O68_05530;Name=C5O68_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05530 PTQV01000032.1 Protein Homology CDS 58947 59348 . - 0 ID=cds-RJP82549.1;Parent=gene-C5O68_05530;Dbxref=NCBI_GP:RJP82549.1;Name=RJP82549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358855.1;locus_tag=C5O68_05530;product=regulatory protein Spx;protein_id=RJP82549.1;transl_table=11 PTQV01000032.1 Genbank gene 59558 60175 . - . ID=gene-C5O68_05535;Name=C5O68_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05535 PTQV01000032.1 Protein Homology CDS 59558 60175 . - 0 ID=cds-RJP82550.1;Parent=gene-C5O68_05535;Dbxref=NCBI_GP:RJP82550.1;Name=RJP82550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445838.1;locus_tag=C5O68_05535;product=TIGR01906 family membrane protein;protein_id=RJP82550.1;transl_table=11 PTQV01000032.1 Genbank gene 60165 60938 . - . ID=gene-C5O68_05540;Name=C5O68_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05540 PTQV01000032.1 Protein Homology CDS 60165 60938 . - 0 ID=cds-RJP82551.1;Parent=gene-C5O68_05540;Dbxref=NCBI_GP:RJP82551.1;Name=RJP82551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445837.1;locus_tag=C5O68_05540;product=TIGR01457 family HAD-type hydrolase;protein_id=RJP82551.1;transl_table=11 PTQV01000032.1 Genbank gene 60947 61684 . - . ID=gene-C5O68_05545;Name=C5O68_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05545 PTQV01000032.1 Protein Homology CDS 60947 61684 . - 0 ID=cds-RJP82558.1;Parent=gene-C5O68_05545;Dbxref=NCBI_GP:RJP82558.1;Name=RJP82558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445836.1;locus_tag=C5O68_05545;product=acyl-[acyl-carrier-protein] thioesterase;protein_id=RJP82558.1;transl_table=11 PTQV01000032.1 Genbank gene 61689 62819 . - . ID=gene-C5O68_05550;Name=C5O68_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05550 PTQV01000032.1 Protein Homology CDS 61689 62819 . - 0 ID=cds-RJP82552.1;Parent=gene-C5O68_05550;Dbxref=NCBI_GP:RJP82552.1;Name=RJP82552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358859.1;locus_tag=C5O68_05550;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=RJP82552.1;transl_table=11 PTQV01000032.1 Genbank gene 62903 63292 . - . ID=gene-C5O68_05555;Name=C5O68_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05555 PTQV01000032.1 Protein Homology CDS 62903 63292 . - 0 ID=cds-RJP82553.1;Parent=gene-C5O68_05555;Dbxref=NCBI_GP:RJP82553.1;Name=RJP82553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358860.1;locus_tag=C5O68_05555;product=YtxH domain-containing protein;protein_id=RJP82553.1;transl_table=11 PTQV01000032.1 Genbank gene 63308 63691 . - . ID=gene-C5O68_05560;Name=C5O68_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05560 PTQV01000032.1 Protein Homology CDS 63308 63691 . - 0 ID=cds-RJP82554.1;Parent=gene-C5O68_05560;Dbxref=NCBI_GP:RJP82554.1;Name=RJP82554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358861.1;locus_tag=C5O68_05560;product=DUF948 domain-containing protein;protein_id=RJP82554.1;transl_table=11 PTQV01000032.1 Genbank gene 63692 64480 . - . ID=gene-C5O68_05565;Name=C5O68_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05565 PTQV01000032.1 Protein Homology CDS 63692 64480 . - 0 ID=cds-RJP82555.1;Parent=gene-C5O68_05565;Dbxref=NCBI_GP:RJP82555.1;Name=RJP82555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445832.1;locus_tag=C5O68_05565;product=prolipoprotein diacylglyceryl transferase;protein_id=RJP82555.1;transl_table=11 PTQV01000032.1 Genbank gene 64473 65423 . - . ID=gene-C5O68_05570;Name=C5O68_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05570 PTQV01000032.1 Protein Homology CDS 64473 65423 . - 0 ID=cds-RJP82556.1;Parent=gene-C5O68_05570;Dbxref=NCBI_GP:RJP82556.1;Name=RJP82556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358863.1;locus_tag=C5O68_05570;product=HPr kinase/phosphorylase;protein_id=RJP82556.1;transl_table=11 ##sequence-region PTQV01000033.1 1 35084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000033.1 Genbank region 1 35084 . + . ID=PTQV01000033.1:1..35084;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000033.1 Genbank pseudogene 1 803 . - . ID=gene-C5O68_05575;Name=C5O68_05575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05575;pseudo=true PTQV01000033.1 Protein Homology CDS 1 803 . - 0 ID=cds-C5O68_05575;Parent=gene-C5O68_05575;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358042.1;locus_tag=C5O68_05575;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 PTQV01000033.1 Genbank gene 1177 1326 . - . ID=gene-C5O68_05580;Name=C5O68_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05580 PTQV01000033.1 Protein Homology CDS 1177 1326 . - 0 ID=cds-RJP82382.1;Parent=gene-C5O68_05580;Dbxref=NCBI_GP:RJP82382.1;Name=RJP82382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410533.1;locus_tag=C5O68_05580;product=cell envelope;protein_id=RJP82382.1;transl_table=11 PTQV01000033.1 Genbank gene 1291 1410 . + . ID=gene-C5O68_05585;Name=C5O68_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05585 PTQV01000033.1 Protein Homology CDS 1291 1410 . + 0 ID=cds-RJP82383.1;Parent=gene-C5O68_05585;Dbxref=NCBI_GP:RJP82383.1;Name=RJP82383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808898.1;locus_tag=C5O68_05585;product=glutamine synthetase;protein_id=RJP82383.1;transl_table=11 PTQV01000033.1 Genbank gene 1506 2852 . - . ID=gene-C5O68_05590;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=C5O68_05590 PTQV01000033.1 Protein Homology CDS 1506 2852 . - 0 ID=cds-RJP82384.1;Parent=gene-C5O68_05590;Dbxref=NCBI_GP:RJP82384.1;Name=RJP82384.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445488.1;locus_tag=C5O68_05590;product=type I glutamate--ammonia ligase;protein_id=RJP82384.1;transl_table=11 PTQV01000033.1 Genbank gene 2889 3245 . - . ID=gene-C5O68_05595;Name=C5O68_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05595 PTQV01000033.1 Protein Homology CDS 2889 3245 . - 0 ID=cds-RJP82385.1;Parent=gene-C5O68_05595;Dbxref=NCBI_GP:RJP82385.1;Name=RJP82385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358037.1;locus_tag=C5O68_05595;product=MerR family transcriptional regulator;protein_id=RJP82385.1;transl_table=11 PTQV01000033.1 Genbank gene 3322 3849 . - . ID=gene-C5O68_05600;Name=C5O68_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05600 PTQV01000033.1 Protein Homology CDS 3322 3849 . - 0 ID=cds-RJP82386.1;Parent=gene-C5O68_05600;Dbxref=NCBI_GP:RJP82386.1;Name=RJP82386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445486.1;locus_tag=C5O68_05600;product=hypothetical protein;protein_id=RJP82386.1;transl_table=11 PTQV01000033.1 Genbank gene 4323 5519 . - . ID=gene-C5O68_05605;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=C5O68_05605 PTQV01000033.1 Protein Homology CDS 4323 5519 . - 0 ID=cds-RJP82387.1;Parent=gene-C5O68_05605;Dbxref=NCBI_GP:RJP82387.1;Name=RJP82387.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096748.1;locus_tag=C5O68_05605;product=phosphoglycerate kinase;protein_id=RJP82387.1;transl_table=11 PTQV01000033.1 Genbank gene 5609 10624 . - . ID=gene-C5O68_05610;Name=C5O68_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05610 PTQV01000033.1 Protein Homology CDS 5609 10624 . - 0 ID=cds-RJP82388.1;Parent=gene-C5O68_05610;Dbxref=NCBI_GP:RJP82388.1;Name=RJP82388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445484.1;locus_tag=C5O68_05610;product=endo-beta-N-acetylglucosaminidase;protein_id=RJP82388.1;transl_table=11 PTQV01000033.1 Genbank gene 10922 12553 . + . ID=gene-C5O68_05615;Name=C5O68_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05615 PTQV01000033.1 Protein Homology CDS 10922 12553 . + 0 ID=cds-RJP82389.1;Parent=gene-C5O68_05615;Dbxref=NCBI_GP:RJP82389.1;Name=RJP82389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358033.1;locus_tag=C5O68_05615;product=sodium-dependent phosphate transporter;protein_id=RJP82389.1;transl_table=11 PTQV01000033.1 Genbank gene 12923 14530 . - . ID=gene-C5O68_05620;Name=C5O68_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05620 PTQV01000033.1 Protein Homology CDS 12923 14530 . - 0 ID=cds-RJP82390.1;Parent=gene-C5O68_05620;Dbxref=NCBI_GP:RJP82390.1;Name=RJP82390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358032.1;locus_tag=C5O68_05620;product=CTP synthase;protein_id=RJP82390.1;transl_table=11 PTQV01000033.1 Genbank gene 14921 15523 . - . ID=gene-C5O68_05625;Name=C5O68_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05625 PTQV01000033.1 Protein Homology CDS 14921 15523 . - 0 ID=cds-RJP82391.1;Parent=gene-C5O68_05625;Dbxref=NCBI_GP:RJP82391.1;Name=RJP82391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445540.1;locus_tag=C5O68_05625;product=DNA-directed RNA polymerase subunit delta;protein_id=RJP82391.1;transl_table=11 PTQV01000033.1 Genbank gene 15636 16085 . - . ID=gene-C5O68_05630;Name=C5O68_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05630 PTQV01000033.1 Protein Homology CDS 15636 16085 . - 0 ID=cds-RJP82392.1;Parent=gene-C5O68_05630;Dbxref=NCBI_GP:RJP82392.1;Name=RJP82392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358030.1;locus_tag=C5O68_05630;product=N-acetyltransferase;protein_id=RJP82392.1;transl_table=11 PTQV01000033.1 Genbank pseudogene 16090 16212 . - . ID=gene-C5O68_05635;Name=C5O68_05635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05635;pseudo=true PTQV01000033.1 Protein Homology CDS 16090 16212 . - 0 ID=cds-C5O68_05635;Parent=gene-C5O68_05635;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358029.1;locus_tag=C5O68_05635;product=chromosome partitioning protein ParB;pseudo=true;transl_table=11 PTQV01000033.1 Genbank pseudogene 16222 16942 . - . ID=gene-C5O68_05640;Name=C5O68_05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05640;pseudo=true PTQV01000033.1 Protein Homology CDS 16222 16942 . - 0 ID=cds-C5O68_05640;Parent=gene-C5O68_05640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=C5O68_05640;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000033.1 Genbank gene 17161 18318 . - . ID=gene-C5O68_05645;Name=C5O68_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05645 PTQV01000033.1 Protein Homology CDS 17161 18318 . - 0 ID=cds-RJP82393.1;Parent=gene-C5O68_05645;Dbxref=NCBI_GP:RJP82393.1;Name=RJP82393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007285020.1;locus_tag=C5O68_05645;product=MFS transporter;protein_id=RJP82393.1;transl_table=11 PTQV01000033.1 Genbank pseudogene 18915 19052 . - . ID=gene-C5O68_05650;Name=C5O68_05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05650;pseudo=true PTQV01000033.1 Protein Homology CDS 18915 19052 . - 0 ID=cds-C5O68_05650;Parent=gene-C5O68_05650;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358028.1;locus_tag=C5O68_05650;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 PTQV01000033.1 Genbank gene 19070 20290 . - . ID=gene-C5O68_05655;Name=C5O68_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05655 PTQV01000033.1 Protein Homology CDS 19070 20290 . - 0 ID=cds-RJP82394.1;Parent=gene-C5O68_05655;Dbxref=NCBI_GP:RJP82394.1;Name=RJP82394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091364.1;locus_tag=C5O68_05655;product=hypothetical protein;protein_id=RJP82394.1;transl_table=11 PTQV01000033.1 Genbank gene 20490 21362 . - . ID=gene-C5O68_05660;Name=C5O68_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05660 PTQV01000033.1 Protein Homology CDS 20490 21362 . - 0 ID=cds-RJP82395.1;Parent=gene-C5O68_05660;Dbxref=NCBI_GP:RJP82395.1;Name=RJP82395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525616.1;locus_tag=C5O68_05660;product=transcriptional regulator;protein_id=RJP82395.1;transl_table=11 PTQV01000033.1 Genbank gene 21474 22124 . - . ID=gene-C5O68_05665;Name=C5O68_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05665 PTQV01000033.1 Protein Homology CDS 21474 22124 . - 0 ID=cds-RJP82396.1;Parent=gene-C5O68_05665;Dbxref=NCBI_GP:RJP82396.1;Name=RJP82396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358028.1;locus_tag=C5O68_05665;product=phosphatase PAP2 family protein;protein_id=RJP82396.1;transl_table=11 PTQV01000033.1 Genbank gene 22114 22677 . - . ID=gene-C5O68_05670;Name=C5O68_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05670 PTQV01000033.1 Protein Homology CDS 22114 22677 . - 0 ID=cds-RJP82397.1;Parent=gene-C5O68_05670;Dbxref=NCBI_GP:RJP82397.1;Name=RJP82397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446907.1;locus_tag=C5O68_05670;product=ECF transporter S component;protein_id=RJP82397.1;transl_table=11 PTQV01000033.1 cmsearch riboswitch 22841 23060 . - . ID=id-PTQV01000033.1:22841..23060;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000033.1 Genbank gene 23120 23623 . - . ID=gene-C5O68_05675;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=C5O68_05675 PTQV01000033.1 Protein Homology CDS 23120 23623 . - 0 ID=cds-RJP82398.1;Parent=gene-C5O68_05675;Dbxref=NCBI_GP:RJP82398.1;Name=RJP82398.1;gbkey=CDS;gene=trmL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446908.1;locus_tag=C5O68_05675;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=RJP82398.1;transl_table=11 PTQV01000033.1 Genbank gene 23816 24646 . - . ID=gene-C5O68_05680;Name=C5O68_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05680 PTQV01000033.1 Protein Homology CDS 23816 24646 . - 0 ID=cds-RJP82399.1;Parent=gene-C5O68_05680;Dbxref=NCBI_GP:RJP82399.1;Name=RJP82399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358025.1;locus_tag=C5O68_05680;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RJP82399.1;transl_table=11 PTQV01000033.1 Genbank gene 24631 26313 . - . ID=gene-C5O68_05685;Name=C5O68_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05685 PTQV01000033.1 Protein Homology CDS 24631 26313 . - 0 ID=cds-RJP82400.1;Parent=gene-C5O68_05685;Dbxref=NCBI_GP:RJP82400.1;Name=RJP82400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358024.1;locus_tag=C5O68_05685;product=heme ABC transporter ATP-binding protein;protein_id=RJP82400.1;transl_table=11 PTQV01000033.1 Genbank gene 26351 26449 . - . ID=gene-C5O68_05690;Name=C5O68_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05690 PTQV01000033.1 Protein Homology CDS 26351 26449 . - 0 ID=cds-RJP82407.1;Parent=gene-C5O68_05690;Dbxref=NCBI_GP:RJP82407.1;Name=RJP82407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_05690;product=DNA alkylation repair protein;protein_id=RJP82407.1;transl_table=11 PTQV01000033.1 Genbank gene 26596 27144 . - . ID=gene-C5O68_05695;Name=C5O68_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05695 PTQV01000033.1 Protein Homology CDS 26596 27144 . - 0 ID=cds-RJP82401.1;Parent=gene-C5O68_05695;Dbxref=NCBI_GP:RJP82401.1;Name=RJP82401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358023.1;locus_tag=C5O68_05695;product=ECF-type riboflavin transporter substrate-binding protein;protein_id=RJP82401.1;transl_table=11 PTQV01000033.1 Genbank gene 27163 28011 . - . ID=gene-C5O68_05700;Name=C5O68_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05700 PTQV01000033.1 Protein Homology CDS 27163 28011 . - 0 ID=cds-RJP82402.1;Parent=gene-C5O68_05700;Dbxref=NCBI_GP:RJP82402.1;Name=RJP82402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001862942.1;locus_tag=C5O68_05700;product=DNA-directed RNA polymerase subunit delta;protein_id=RJP82402.1;transl_table=11 PTQV01000033.1 Genbank gene 28200 29549 . + . ID=gene-C5O68_05705;Name=C5O68_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05705 PTQV01000033.1 Protein Homology CDS 28200 29549 . + 0 ID=cds-RJP82403.1;Parent=gene-C5O68_05705;Dbxref=NCBI_GP:RJP82403.1;Name=RJP82403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446913.1;locus_tag=C5O68_05705;product=Trk system potassium transporter TrkA;protein_id=RJP82403.1;transl_table=11 PTQV01000033.1 Genbank gene 29553 30992 . + . ID=gene-C5O68_05710;Name=C5O68_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05710 PTQV01000033.1 Protein Homology CDS 29553 30992 . + 0 ID=cds-RJP82404.1;Parent=gene-C5O68_05710;Dbxref=NCBI_GP:RJP82404.1;Name=RJP82404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446914.1;locus_tag=C5O68_05710;product=Trk system potassium transporter TrkH;protein_id=RJP82404.1;transl_table=11 PTQV01000033.1 Genbank pseudogene 31007 31127 . + . ID=gene-C5O68_05715;Name=C5O68_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05715;pseudo=true PTQV01000033.1 Protein Homology CDS 31007 31127 . + 0 ID=cds-C5O68_05715;Parent=gene-C5O68_05715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_05715;product=DNA alkylation repair protein;pseudo=true;transl_table=11 PTQV01000033.1 Genbank gene 31294 33618 . - . ID=gene-C5O68_05720;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=C5O68_05720 PTQV01000033.1 Protein Homology CDS 31294 33618 . - 0 ID=cds-RJP82405.1;Parent=gene-C5O68_05720;Dbxref=NCBI_GP:RJP82405.1;Name=RJP82405.1;gbkey=CDS;gene=pflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358009.1;locus_tag=C5O68_05720;product=formate C-acetyltransferase;protein_id=RJP82405.1;transl_table=11 PTQV01000033.1 Genbank gene 33856 34917 . + . ID=gene-C5O68_05725;Name=C5O68_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05725 PTQV01000033.1 Protein Homology CDS 33856 34917 . + 0 ID=cds-RJP82406.1;Parent=gene-C5O68_05725;Dbxref=NCBI_GP:RJP82406.1;Name=RJP82406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446916.1;locus_tag=C5O68_05725;product=DNA polymerase IV;protein_id=RJP82406.1;transl_table=11 PTQV01000033.1 Genbank gene 34943 35062 . - . ID=gene-C5O68_05730;Name=C5O68_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05730 PTQV01000033.1 Protein Homology CDS 34943 35062 . - 0 ID=cds-RJP82408.1;Parent=gene-C5O68_05730;Dbxref=NCBI_GP:RJP82408.1;Name=RJP82408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808892.1;locus_tag=C5O68_05730;product=UDP pyrophosphate phosphatase;protein_id=RJP82408.1;transl_table=11 ##sequence-region PTQV01000034.1 1 12242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000034.1 Genbank region 1 12242 . + . ID=PTQV01000034.1:1..12242;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000034.1 Genbank gene 1 163 . - . ID=gene-C5O68_05735;Name=C5O68_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05735;partial=true;start_range=.,1 PTQV01000034.1 Protein Homology CDS 1 163 . - 0 ID=cds-RJP82299.1;Parent=gene-C5O68_05735;Dbxref=NCBI_GP:RJP82299.1;Name=RJP82299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=C5O68_05735;partial=true;product=ISNCY family transposase;protein_id=RJP82299.1;start_range=.,1;transl_table=11 PTQV01000034.1 Genbank gene 366 614 . + . ID=gene-C5O68_05740;Name=C5O68_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05740 PTQV01000034.1 Protein Homology CDS 366 614 . + 0 ID=cds-RJP82300.1;Parent=gene-C5O68_05740;Dbxref=NCBI_GP:RJP82300.1;Name=RJP82300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445470.1;locus_tag=C5O68_05740;product=hypothetical protein;protein_id=RJP82300.1;transl_table=11 PTQV01000034.1 Genbank gene 815 1609 . + . ID=gene-C5O68_05745;Name=C5O68_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05745 PTQV01000034.1 Protein Homology CDS 815 1609 . + 0 ID=cds-RJP82301.1;Parent=gene-C5O68_05745;Dbxref=NCBI_GP:RJP82301.1;Name=RJP82301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359288.1;locus_tag=C5O68_05745;product=glutamate racemase;protein_id=RJP82301.1;transl_table=11 PTQV01000034.1 Genbank gene 1606 2577 . + . ID=gene-C5O68_05750;Name=C5O68_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05750 PTQV01000034.1 Protein Homology CDS 1606 2577 . + 0 ID=cds-RJP82302.1;Parent=gene-C5O68_05750;Dbxref=NCBI_GP:RJP82302.1;Name=RJP82302.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445472.1;locus_tag=C5O68_05750;product=non-canonical purine NTP pyrophosphatase;protein_id=RJP82302.1;transl_table=11 PTQV01000034.1 Genbank gene 2553 3074 . + . ID=gene-C5O68_05755;Name=C5O68_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05755 PTQV01000034.1 Protein Homology CDS 2553 3074 . + 0 ID=cds-RJP82303.1;Parent=gene-C5O68_05755;Dbxref=NCBI_GP:RJP82303.1;Name=RJP82303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445473.1;locus_tag=C5O68_05755;product=metallophosphoesterase;protein_id=RJP82303.1;transl_table=11 PTQV01000034.1 Genbank gene 3071 3532 . + . ID=gene-C5O68_05760;Name=C5O68_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05760 PTQV01000034.1 Protein Homology CDS 3071 3532 . + 0 ID=cds-RJP82304.1;Parent=gene-C5O68_05760;Dbxref=NCBI_GP:RJP82304.1;Name=RJP82304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445474.1;locus_tag=C5O68_05760;product=CBS domain-containing protein;protein_id=RJP82304.1;transl_table=11 PTQV01000034.1 Genbank gene 3523 4263 . + . ID=gene-C5O68_05765;Name=C5O68_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05765 PTQV01000034.1 Protein Homology CDS 3523 4263 . + 0 ID=cds-RJP82305.1;Parent=gene-C5O68_05765;Dbxref=NCBI_GP:RJP82305.1;Name=RJP82305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445475.1;locus_tag=C5O68_05765;product=site-specific tyrosine recombinase XerD;protein_id=RJP82305.1;transl_table=11 PTQV01000034.1 Genbank gene 4263 4991 . + . ID=gene-C5O68_05770;Name=C5O68_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05770 PTQV01000034.1 Protein Homology CDS 4263 4991 . + 0 ID=cds-RJP82306.1;Parent=gene-C5O68_05770;Dbxref=NCBI_GP:RJP82306.1;Name=RJP82306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359283.1;locus_tag=C5O68_05770;product=segregation/condensation protein A;protein_id=RJP82306.1;transl_table=11 PTQV01000034.1 Genbank gene 5010 5579 . + . ID=gene-C5O68_05775;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=C5O68_05775 PTQV01000034.1 Protein Homology CDS 5010 5579 . + 0 ID=cds-RJP82307.1;Parent=gene-C5O68_05775;Dbxref=NCBI_GP:RJP82307.1;Name=RJP82307.1;Note=functions during chromosome segregation%3B may form a condensin-like structure with SMC and ScpA%3B forms a homodimer;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359282.1;locus_tag=C5O68_05775;product=segregation and condensation protein B;protein_id=RJP82307.1;transl_table=11 PTQV01000034.1 Genbank gene 5566 6288 . + . ID=gene-C5O68_05780;Name=C5O68_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05780 PTQV01000034.1 Protein Homology CDS 5566 6288 . + 0 ID=cds-RJP82308.1;Parent=gene-C5O68_05780;Dbxref=NCBI_GP:RJP82308.1;Name=RJP82308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359281.1;locus_tag=C5O68_05780;product=rRNA pseudouridine synthase;protein_id=RJP82308.1;transl_table=11 PTQV01000034.1 Genbank gene 6288 6530 . + . ID=gene-C5O68_05785;Name=C5O68_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05785 PTQV01000034.1 Protein Homology CDS 6288 6530 . + 0 ID=cds-RJP82309.1;Parent=gene-C5O68_05785;Dbxref=NCBI_GP:RJP82309.1;Name=RJP82309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359280.1;locus_tag=C5O68_05785;product=membrane protein insertion efficiency factor YidD;protein_id=RJP82309.1;transl_table=11 PTQV01000034.1 Genbank gene 6755 7720 . - . ID=gene-C5O68_05790;Name=C5O68_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05790 PTQV01000034.1 Protein Homology CDS 6755 7720 . - 0 ID=cds-RJP82310.1;Parent=gene-C5O68_05790;Dbxref=NCBI_GP:RJP82310.1;Name=RJP82310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359279.1;locus_tag=C5O68_05790;product=iron ABC transporter substrate-binding protein;protein_id=RJP82310.1;transl_table=11 PTQV01000034.1 Genbank gene 7816 8568 . - . ID=gene-C5O68_05795;Name=C5O68_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05795 PTQV01000034.1 Protein Homology CDS 7816 8568 . - 0 ID=cds-RJP82311.1;Parent=gene-C5O68_05795;Dbxref=NCBI_GP:RJP82311.1;Name=RJP82311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359278.1;locus_tag=C5O68_05795;product=iron ABC transporter ATP-binding protein;protein_id=RJP82311.1;transl_table=11 PTQV01000034.1 Genbank gene 8565 9524 . - . ID=gene-C5O68_05800;Name=C5O68_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05800 PTQV01000034.1 Protein Homology CDS 8565 9524 . - 0 ID=cds-RJP82312.1;Parent=gene-C5O68_05800;Dbxref=NCBI_GP:RJP82312.1;Name=RJP82312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359277.1;locus_tag=C5O68_05800;product=ferrichrome ABC transporter permease;protein_id=RJP82312.1;transl_table=11 PTQV01000034.1 Genbank gene 9514 10488 . - . ID=gene-C5O68_05805;Name=C5O68_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05805 PTQV01000034.1 Protein Homology CDS 9514 10488 . - 0 ID=cds-RJP82313.1;Parent=gene-C5O68_05805;Dbxref=NCBI_GP:RJP82313.1;Name=RJP82313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359276.1;locus_tag=C5O68_05805;product=ferrichrome ABC transporter permease;protein_id=RJP82313.1;transl_table=11 PTQV01000034.1 Genbank gene 10711 11775 . + . ID=gene-C5O68_05810;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=C5O68_05810 PTQV01000034.1 Protein Homology CDS 10711 11775 . + 0 ID=cds-RJP82314.1;Parent=gene-C5O68_05810;Dbxref=NCBI_GP:RJP82314.1;Name=RJP82314.1;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445481.1;locus_tag=C5O68_05810;product=glutamyl aminopeptidase;protein_id=RJP82314.1;transl_table=11 PTQV01000034.1 Genbank gene 11797 12093 . + . ID=gene-C5O68_05815;Name=C5O68_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05815 PTQV01000034.1 Protein Homology CDS 11797 12093 . + 0 ID=cds-RJP82315.1;Parent=gene-C5O68_05815;Dbxref=NCBI_GP:RJP82315.1;Name=RJP82315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445482.1;locus_tag=C5O68_05815;product=bacteriocin immunity protein;protein_id=RJP82315.1;transl_table=11 ##sequence-region PTQV01000035.1 1 36481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000035.1 Genbank region 1 36481 . + . ID=PTQV01000035.1:1..36481;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000035.1 Genbank pseudogene 120 325 . - . ID=gene-C5O68_05820;Name=C5O68_05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05820;pseudo=true PTQV01000035.1 Protein Homology CDS 120 325 . - 0 ID=cds-C5O68_05820;Parent=gene-C5O68_05820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844775.1;locus_tag=C5O68_05820;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PTQV01000035.1 Genbank gene 763 1680 . + . ID=gene-C5O68_05825;Name=C5O68_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05825 PTQV01000035.1 Protein Homology CDS 763 1680 . + 0 ID=cds-RJP82191.1;Parent=gene-C5O68_05825;Dbxref=NCBI_GP:RJP82191.1;Name=RJP82191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358611.1;locus_tag=C5O68_05825;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=RJP82191.1;transl_table=11 PTQV01000035.1 Genbank gene 1773 2621 . - . ID=gene-C5O68_05830;Name=C5O68_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05830 PTQV01000035.1 Protein Homology CDS 1773 2621 . - 0 ID=cds-RJP82192.1;Parent=gene-C5O68_05830;Dbxref=NCBI_GP:RJP82192.1;Name=RJP82192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358612.1;locus_tag=C5O68_05830;product=YitT family protein;protein_id=RJP82192.1;transl_table=11 PTQV01000035.1 Genbank gene 2762 3601 . + . ID=gene-C5O68_05835;Name=C5O68_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05835 PTQV01000035.1 Protein Homology CDS 2762 3601 . + 0 ID=cds-RJP82193.1;Parent=gene-C5O68_05835;Dbxref=NCBI_GP:RJP82193.1;Name=RJP82193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358613.1;locus_tag=C5O68_05835;product=EDD domain protein;protein_id=RJP82193.1;transl_table=11 PTQV01000035.1 Genbank gene 3707 3982 . + . ID=gene-C5O68_05840;Name=C5O68_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05840 PTQV01000035.1 Protein Homology CDS 3707 3982 . + 0 ID=cds-RJP82194.1;Parent=gene-C5O68_05840;Dbxref=NCBI_GP:RJP82194.1;Name=RJP82194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358614.1;locus_tag=C5O68_05840;product=HU family DNA-binding protein;protein_id=RJP82194.1;transl_table=11 PTQV01000035.1 Genbank gene 4408 6309 . + . ID=gene-C5O68_05845;Name=C5O68_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05845 PTQV01000035.1 Protein Homology CDS 4408 6309 . + 0 ID=cds-RJP82195.1;Parent=gene-C5O68_05845;Dbxref=NCBI_GP:RJP82195.1;Name=RJP82195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358615.1;locus_tag=C5O68_05845;product=ABC transporter ATP-binding protein;protein_id=RJP82195.1;transl_table=11 PTQV01000035.1 Genbank gene 6312 7175 . + . ID=gene-C5O68_05850;Name=C5O68_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05850 PTQV01000035.1 Protein Homology CDS 6312 7175 . + 0 ID=cds-RJP82196.1;Parent=gene-C5O68_05850;Dbxref=NCBI_GP:RJP82196.1;Name=RJP82196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012291596.1;locus_tag=C5O68_05850;product=MutR family transcriptional regulator;protein_id=RJP82196.1;transl_table=11 PTQV01000035.1 Genbank gene 7255 8433 . + . ID=gene-C5O68_05855;Name=C5O68_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05855 PTQV01000035.1 Protein Homology CDS 7255 8433 . + 0 ID=cds-RJP82197.1;Parent=gene-C5O68_05855;Dbxref=NCBI_GP:RJP82197.1;Name=RJP82197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358617.1;locus_tag=C5O68_05855;product=MFS transporter;protein_id=RJP82197.1;transl_table=11 PTQV01000035.1 Genbank gene 8526 10484 . + . ID=gene-C5O68_05860;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=C5O68_05860 PTQV01000035.1 Protein Homology CDS 8526 10484 . + 0 ID=cds-RJP82198.1;Parent=gene-C5O68_05860;Dbxref=NCBI_GP:RJP82198.1;Name=RJP82198.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446280.1;locus_tag=C5O68_05860;product=DNA ligase;protein_id=RJP82198.1;transl_table=11 PTQV01000035.1 Genbank gene 10487 11446 . + . ID=gene-C5O68_05865;Name=C5O68_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05865 PTQV01000035.1 Protein Homology CDS 10487 11446 . + 0 ID=cds-RJP82199.1;Parent=gene-C5O68_05865;Dbxref=NCBI_GP:RJP82199.1;Name=RJP82199.1;Note=similar to YegS from E. coli;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134183.1;locus_tag=C5O68_05865;product=diacylglycerol kinase;protein_id=RJP82199.1;transl_table=11 PTQV01000035.1 Genbank gene 11469 13748 . + . ID=gene-C5O68_05870;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=C5O68_05870 PTQV01000035.1 Protein Homology CDS 11469 13748 . + 0 ID=cds-RJP82200.1;Parent=gene-C5O68_05870;Dbxref=NCBI_GP:RJP82200.1;Name=RJP82200.1;gbkey=CDS;gene=pulA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358619.1;locus_tag=C5O68_05870;product=type I pullulanase;protein_id=RJP82200.1;transl_table=11 PTQV01000035.1 Genbank pseudogene 14129 16038 . + . ID=gene-C5O68_05875;Name=C5O68_05875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_05875;pseudo=true PTQV01000035.1 Protein Homology CDS 14129 16038 . + 0 ID=cds-C5O68_05875;Parent=gene-C5O68_05875;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446277.1;locus_tag=C5O68_05875;product=1%2C4-alpha-glucan branching enzyme;pseudo=true;transl_table=11 PTQV01000035.1 Genbank gene 16028 17170 . + . ID=gene-C5O68_05880;Name=C5O68_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05880 PTQV01000035.1 Protein Homology CDS 16028 17170 . + 0 ID=cds-RJP82201.1;Parent=gene-C5O68_05880;Dbxref=NCBI_GP:RJP82201.1;Name=RJP82201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446276.1;locus_tag=C5O68_05880;product=glucose-1-phosphate adenylyltransferase;protein_id=RJP82201.1;transl_table=11 PTQV01000035.1 Genbank gene 17160 18299 . + . ID=gene-C5O68_05885;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=C5O68_05885 PTQV01000035.1 Protein Homology CDS 17160 18299 . + 0 ID=cds-RJP82202.1;Parent=gene-C5O68_05885;Dbxref=NCBI_GP:RJP82202.1;Name=RJP82202.1;gbkey=CDS;gene=glgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358625.1;locus_tag=C5O68_05885;product=glucose-1-phosphate adenylyltransferase subunit GlgD;protein_id=RJP82202.1;transl_table=11 PTQV01000035.1 Genbank gene 18296 19729 . + . ID=gene-C5O68_05890;Name=C5O68_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05890 PTQV01000035.1 Protein Homology CDS 18296 19729 . + 0 ID=cds-RJP82203.1;Parent=gene-C5O68_05890;Dbxref=NCBI_GP:RJP82203.1;Name=RJP82203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358626.1;locus_tag=C5O68_05890;product=glycogen synthase GlgA;protein_id=RJP82203.1;transl_table=11 PTQV01000035.1 Genbank pseudogene 19788 20433 . + . ID=gene-C5O68_05895;Name=serB;gbkey=Gene;gene=serB;gene_biotype=pseudogene;locus_tag=C5O68_05895;pseudo=true PTQV01000035.1 Protein Homology CDS 19788 20433 . + 0 ID=cds-C5O68_05895;Parent=gene-C5O68_05895;Note=frameshifted;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446273.1;locus_tag=C5O68_05895;product=phosphoserine phosphatase SerB;pseudo=true;transl_table=11 PTQV01000035.1 Genbank gene 20430 21557 . + . ID=gene-C5O68_05900;Name=C5O68_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05900 PTQV01000035.1 Protein Homology CDS 20430 21557 . + 0 ID=cds-RJP82204.1;Parent=gene-C5O68_05900;Dbxref=NCBI_GP:RJP82204.1;Name=RJP82204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358628.1;locus_tag=C5O68_05900;product=glycerate kinase;protein_id=RJP82204.1;transl_table=11 PTQV01000035.1 Genbank gene 21554 22000 . - . ID=gene-C5O68_05905;Name=C5O68_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05905 PTQV01000035.1 Protein Homology CDS 21554 22000 . - 0 ID=cds-RJP82205.1;Parent=gene-C5O68_05905;Dbxref=NCBI_GP:RJP82205.1;Name=RJP82205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358629.1;locus_tag=C5O68_05905;product=DUF1694 domain-containing protein;protein_id=RJP82205.1;transl_table=11 PTQV01000035.1 Genbank gene 22164 23468 . + . ID=gene-C5O68_05910;Name=C5O68_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05910 PTQV01000035.1 Protein Homology CDS 22164 23468 . + 0 ID=cds-RJP82206.1;Parent=gene-C5O68_05910;Dbxref=NCBI_GP:RJP82206.1;Name=RJP82206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022813.1;locus_tag=C5O68_05910;product=enolase;protein_id=RJP82206.1;transl_table=11 PTQV01000035.1 Genbank gene 23618 24781 . - . ID=gene-C5O68_05915;Name=C5O68_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05915 PTQV01000035.1 Protein Homology CDS 23618 24781 . - 0 ID=cds-RJP82207.1;Parent=gene-C5O68_05915;Dbxref=NCBI_GP:RJP82207.1;Name=RJP82207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604661.1;locus_tag=C5O68_05915;product=site-specific integrase;protein_id=RJP82207.1;transl_table=11 PTQV01000035.1 Genbank gene 24975 25643 . - . ID=gene-C5O68_05920;Name=C5O68_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05920 PTQV01000035.1 Protein Homology CDS 24975 25643 . - 0 ID=cds-RJP82208.1;Parent=gene-C5O68_05920;Dbxref=NCBI_GP:RJP82208.1;Name=RJP82208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009659321.1;locus_tag=C5O68_05920;product=Fic family protein;protein_id=RJP82208.1;transl_table=11 PTQV01000035.1 Genbank gene 25778 26401 . - . ID=gene-C5O68_05925;Name=C5O68_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05925 PTQV01000035.1 Protein Homology CDS 25778 26401 . - 0 ID=cds-RJP82209.1;Parent=gene-C5O68_05925;Dbxref=NCBI_GP:RJP82209.1;Name=RJP82209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284860.1;locus_tag=C5O68_05925;product=hypothetical protein;protein_id=RJP82209.1;transl_table=11 PTQV01000035.1 Genbank gene 26556 26741 . + . ID=gene-C5O68_05930;Name=C5O68_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05930 PTQV01000035.1 Protein Homology CDS 26556 26741 . + 0 ID=cds-RJP82210.1;Parent=gene-C5O68_05930;Dbxref=NCBI_GP:RJP82210.1;Name=RJP82210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245570.1;locus_tag=C5O68_05930;product=hypothetical protein;protein_id=RJP82210.1;transl_table=11 PTQV01000035.1 Genbank gene 27136 27636 . + . ID=gene-C5O68_05935;Name=C5O68_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05935 PTQV01000035.1 Protein Homology CDS 27136 27636 . + 0 ID=cds-RJP82211.1;Parent=gene-C5O68_05935;Dbxref=NCBI_GP:RJP82211.1;Name=RJP82211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559720.1;locus_tag=C5O68_05935;product=hypothetical protein;protein_id=RJP82211.1;transl_table=11 PTQV01000035.1 Genbank gene 27648 27848 . + . ID=gene-C5O68_05940;Name=C5O68_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05940 PTQV01000035.1 Protein Homology CDS 27648 27848 . + 0 ID=cds-RJP82212.1;Parent=gene-C5O68_05940;Dbxref=NCBI_GP:RJP82212.1;Name=RJP82212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447107.1;locus_tag=C5O68_05940;product=hypothetical protein;protein_id=RJP82212.1;transl_table=11 PTQV01000035.1 Genbank gene 27850 28053 . + . ID=gene-C5O68_05945;Name=C5O68_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05945 PTQV01000035.1 Protein Homology CDS 27850 28053 . + 0 ID=cds-RJP82213.1;Parent=gene-C5O68_05945;Dbxref=NCBI_GP:RJP82213.1;Name=RJP82213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262870.1;locus_tag=C5O68_05945;product=hypothetical protein;protein_id=RJP82213.1;transl_table=11 PTQV01000035.1 Genbank gene 28067 28333 . + . ID=gene-C5O68_05950;Name=C5O68_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05950 PTQV01000035.1 Protein Homology CDS 28067 28333 . + 0 ID=cds-RJP82214.1;Parent=gene-C5O68_05950;Dbxref=NCBI_GP:RJP82214.1;Name=RJP82214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014407969.1;locus_tag=C5O68_05950;product=hypothetical protein;protein_id=RJP82214.1;transl_table=11 PTQV01000035.1 Genbank gene 28495 29361 . + . ID=gene-C5O68_05955;Name=C5O68_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05955 PTQV01000035.1 Protein Homology CDS 28495 29361 . + 0 ID=cds-RJP82215.1;Parent=gene-C5O68_05955;Dbxref=NCBI_GP:RJP82215.1;Name=RJP82215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447102.1;locus_tag=C5O68_05955;product=hypothetical protein;protein_id=RJP82215.1;transl_table=11 PTQV01000035.1 Genbank gene 29441 30895 . + . ID=gene-C5O68_05960;Name=C5O68_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05960 PTQV01000035.1 Protein Homology CDS 29441 30895 . + 0 ID=cds-RJP82216.1;Parent=gene-C5O68_05960;Dbxref=NCBI_GP:RJP82216.1;Name=RJP82216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001828839.1;locus_tag=C5O68_05960;product=DNA primase;protein_id=RJP82216.1;transl_table=11 PTQV01000035.1 Genbank gene 31070 31267 . + . ID=gene-C5O68_05965;Name=C5O68_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05965 PTQV01000035.1 Protein Homology CDS 31070 31267 . + 0 ID=cds-RJP82217.1;Parent=gene-C5O68_05965;Dbxref=NCBI_GP:RJP82217.1;Name=RJP82217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251239.1;locus_tag=C5O68_05965;product=hypothetical protein;protein_id=RJP82217.1;transl_table=11 PTQV01000035.1 Genbank gene 31548 31706 . + . ID=gene-C5O68_05970;Name=C5O68_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05970 PTQV01000035.1 Protein Homology CDS 31548 31706 . + 0 ID=cds-RJP82218.1;Parent=gene-C5O68_05970;Dbxref=NCBI_GP:RJP82218.1;Name=RJP82218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864280.1;locus_tag=C5O68_05970;product=DUF2292 domain-containing protein;protein_id=RJP82218.1;transl_table=11 PTQV01000035.1 Genbank gene 31745 32386 . + . ID=gene-C5O68_05975;Name=C5O68_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05975 PTQV01000035.1 Protein Homology CDS 31745 32386 . + 0 ID=cds-RJP82219.1;Parent=gene-C5O68_05975;Dbxref=NCBI_GP:RJP82219.1;Name=RJP82219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001864281.1;locus_tag=C5O68_05975;product=hypothetical protein;protein_id=RJP82219.1;transl_table=11 PTQV01000035.1 Genbank gene 32389 32628 . + . ID=gene-C5O68_05980;Name=C5O68_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05980 PTQV01000035.1 Protein Homology CDS 32389 32628 . + 0 ID=cds-RJP82220.1;Parent=gene-C5O68_05980;Dbxref=NCBI_GP:RJP82220.1;Name=RJP82220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000650801.1;locus_tag=C5O68_05980;product=hypothetical protein;protein_id=RJP82220.1;transl_table=11 PTQV01000035.1 Genbank gene 32692 32958 . + . ID=gene-C5O68_05985;Name=C5O68_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05985 PTQV01000035.1 Protein Homology CDS 32692 32958 . + 0 ID=cds-RJP82221.1;Parent=gene-C5O68_05985;Dbxref=NCBI_GP:RJP82221.1;Name=RJP82221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000252562.1;locus_tag=C5O68_05985;product=hypothetical protein;protein_id=RJP82221.1;transl_table=11 PTQV01000035.1 Genbank gene 33009 33350 . + . ID=gene-C5O68_05990;Name=C5O68_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05990 PTQV01000035.1 Protein Homology CDS 33009 33350 . + 0 ID=cds-RJP82222.1;Parent=gene-C5O68_05990;Dbxref=NCBI_GP:RJP82222.1;Name=RJP82222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035041.1;locus_tag=C5O68_05990;product=replication protein;protein_id=RJP82222.1;transl_table=11 PTQV01000035.1 Genbank gene 33337 33588 . + . ID=gene-C5O68_05995;Name=C5O68_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_05995 PTQV01000035.1 Protein Homology CDS 33337 33588 . + 0 ID=cds-RJP82223.1;Parent=gene-C5O68_05995;Dbxref=NCBI_GP:RJP82223.1;Name=RJP82223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644292.1;locus_tag=C5O68_05995;product=hypothetical protein;protein_id=RJP82223.1;transl_table=11 PTQV01000035.1 Genbank gene 33910 34077 . - . ID=gene-C5O68_06000;Name=C5O68_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06000 PTQV01000035.1 Protein Homology CDS 33910 34077 . - 0 ID=cds-RJP82224.1;Parent=gene-C5O68_06000;Dbxref=NCBI_GP:RJP82224.1;Name=RJP82224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842327.1;locus_tag=C5O68_06000;product=hypothetical protein;protein_id=RJP82224.1;transl_table=11 PTQV01000035.1 Genbank gene 34180 34572 . + . ID=gene-C5O68_06005;Name=C5O68_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06005 PTQV01000035.1 Protein Homology CDS 34180 34572 . + 0 ID=cds-RJP82225.1;Parent=gene-C5O68_06005;Dbxref=NCBI_GP:RJP82225.1;Name=RJP82225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447096.1;locus_tag=C5O68_06005;product=transcriptional regulator;protein_id=RJP82225.1;transl_table=11 PTQV01000035.1 Genbank gene 34923 35258 . + . ID=gene-C5O68_06010;Name=C5O68_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06010 PTQV01000035.1 GeneMarkS+ CDS 34923 35258 . + 0 ID=cds-RJP82226.1;Parent=gene-C5O68_06010;Dbxref=NCBI_GP:RJP82226.1;Name=RJP82226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06010;product=hypothetical protein;protein_id=RJP82226.1;transl_table=11 ##sequence-region PTQV01000036.1 1 58362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000036.1 Genbank region 1 58362 . + . ID=PTQV01000036.1:1..58362;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000036.1 Genbank gene 1 518 . - . ID=gene-C5O68_06015;Name=C5O68_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06015;partial=true;start_range=.,1 PTQV01000036.1 Protein Homology CDS 1 518 . - 0 ID=cds-RJP82104.1;Parent=gene-C5O68_06015;Dbxref=NCBI_GP:RJP82104.1;Name=RJP82104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447109.1;locus_tag=C5O68_06015;partial=true;product=hypothetical protein;protein_id=RJP82104.1;start_range=.,1;transl_table=11 PTQV01000036.1 Genbank pseudogene 509 1146 . - . ID=gene-C5O68_06020;Name=C5O68_06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06020;pseudo=true PTQV01000036.1 Protein Homology CDS 509 1146 . - 0 ID=cds-C5O68_06020;Parent=gene-C5O68_06020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828330.1;locus_tag=C5O68_06020;product=BRO-like protein;pseudo=true;transl_table=11 PTQV01000036.1 Genbank gene 1166 1360 . - . ID=gene-C5O68_06025;Name=C5O68_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06025 PTQV01000036.1 Protein Homology CDS 1166 1360 . - 0 ID=cds-RJP82105.1;Parent=gene-C5O68_06025;Dbxref=NCBI_GP:RJP82105.1;Name=RJP82105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794674.1;locus_tag=C5O68_06025;product=XRE family transcriptional regulator;protein_id=RJP82105.1;transl_table=11 PTQV01000036.1 Genbank gene 1515 2252 . + . ID=gene-C5O68_06030;Name=C5O68_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06030 PTQV01000036.1 Protein Homology CDS 1515 2252 . + 0 ID=cds-RJP82106.1;Parent=gene-C5O68_06030;Dbxref=NCBI_GP:RJP82106.1;Name=RJP82106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13443.4;locus_tag=C5O68_06030;product=XRE family transcriptional regulator;protein_id=RJP82106.1;transl_table=11 PTQV01000036.1 Genbank gene 2399 3253 . + . ID=gene-C5O68_06035;Name=C5O68_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06035 PTQV01000036.1 Protein Homology CDS 2399 3253 . + 0 ID=cds-RJP82107.1;Parent=gene-C5O68_06035;Dbxref=NCBI_GP:RJP82107.1;Name=RJP82107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045741.1;locus_tag=C5O68_06035;product=DNA damage-inducible protein D;protein_id=RJP82107.1;transl_table=11 PTQV01000036.1 Genbank gene 3419 4585 . + . ID=gene-C5O68_06040;Name=C5O68_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06040 PTQV01000036.1 Protein Homology CDS 3419 4585 . + 0 ID=cds-RJP82108.1;Parent=gene-C5O68_06040;Dbxref=NCBI_GP:RJP82108.1;Name=RJP82108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447113.1;locus_tag=C5O68_06040;product=site-specific integrase;protein_id=RJP82108.1;transl_table=11 PTQV01000036.1 Genbank gene 4746 5690 . + . ID=gene-C5O68_06045;Name=C5O68_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06045 PTQV01000036.1 Protein Homology CDS 4746 5690 . + 0 ID=cds-RJP82109.1;Parent=gene-C5O68_06045;Dbxref=NCBI_GP:RJP82109.1;Name=RJP82109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447022.1;locus_tag=C5O68_06045;product=magnesium transporter CorA family protein;protein_id=RJP82109.1;transl_table=11 PTQV01000036.1 Genbank gene 5702 6385 . + . ID=gene-C5O68_06050;Name=C5O68_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06050 PTQV01000036.1 Protein Homology CDS 5702 6385 . + 0 ID=cds-RJP82110.1;Parent=gene-C5O68_06050;Dbxref=NCBI_GP:RJP82110.1;Name=RJP82110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078028.1;locus_tag=C5O68_06050;product=DUF1129 domain-containing protein;protein_id=RJP82110.1;transl_table=11 PTQV01000036.1 Genbank gene 6640 7671 . + . ID=gene-C5O68_06055;Name=C5O68_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06055 PTQV01000036.1 Protein Homology CDS 6640 7671 . + 0 ID=cds-RJP82111.1;Parent=gene-C5O68_06055;Dbxref=NCBI_GP:RJP82111.1;Name=RJP82111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357762.1;locus_tag=C5O68_06055;product=LD-carboxypeptidase;protein_id=RJP82111.1;transl_table=11 PTQV01000036.1 Genbank gene 7723 8397 . - . ID=gene-C5O68_06060;Name=C5O68_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06060 PTQV01000036.1 Protein Homology CDS 7723 8397 . - 0 ID=cds-RJP82112.1;Parent=gene-C5O68_06060;Dbxref=NCBI_GP:RJP82112.1;Name=RJP82112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000987439.1;locus_tag=C5O68_06060;product=CPBP family intramembrane metalloprotease;protein_id=RJP82112.1;transl_table=11 PTQV01000036.1 Genbank gene 8394 8957 . - . ID=gene-C5O68_06065;Name=C5O68_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06065 PTQV01000036.1 Protein Homology CDS 8394 8957 . - 0 ID=cds-RJP82113.1;Parent=gene-C5O68_06065;Dbxref=NCBI_GP:RJP82113.1;Name=RJP82113.1;Note=constitutive%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357760.1;locus_tag=C5O68_06065;product=DNA-3-methyladenine glycosylase I;protein_id=RJP82113.1;transl_table=11 PTQV01000036.1 Genbank gene 8967 9560 . - . ID=gene-C5O68_06070;Name=C5O68_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06070 PTQV01000036.1 Protein Homology CDS 8967 9560 . - 0 ID=cds-RJP82114.1;Parent=gene-C5O68_06070;Dbxref=NCBI_GP:RJP82114.1;Name=RJP82114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357759.1;locus_tag=C5O68_06070;product=Holliday junction branch migration protein RuvA;protein_id=RJP82114.1;transl_table=11 PTQV01000036.1 cmsearch riboswitch 9717 9831 . + . ID=id-PTQV01000036.1:9717..9831;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000036.1 Genbank gene 9967 11067 . + . ID=gene-C5O68_06075;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=C5O68_06075 PTQV01000036.1 Protein Homology CDS 9967 11067 . + 0 ID=cds-RJP82115.1;Parent=gene-C5O68_06075;Dbxref=NCBI_GP:RJP82115.1;Name=RJP82115.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357758.1;locus_tag=C5O68_06075;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=RJP82115.1;transl_table=11 PTQV01000036.1 Genbank gene 11052 11687 . + . ID=gene-C5O68_06080;Name=C5O68_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06080 PTQV01000036.1 Protein Homology CDS 11052 11687 . + 0 ID=cds-RJP82116.1;Parent=gene-C5O68_06080;Dbxref=NCBI_GP:RJP82116.1;Name=RJP82116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357757.1;locus_tag=C5O68_06080;product=riboflavin synthase;protein_id=RJP82116.1;transl_table=11 PTQV01000036.1 Genbank gene 11707 12912 . + . ID=gene-C5O68_06085;Name=C5O68_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06085 PTQV01000036.1 Protein Homology CDS 11707 12912 . + 0 ID=cds-RJP82165.1;Parent=gene-C5O68_06085;Dbxref=NCBI_GP:RJP82165.1;Name=RJP82165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357756.1;locus_tag=C5O68_06085;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=RJP82165.1;transl_table=11 PTQV01000036.1 Genbank gene 12913 13380 . + . ID=gene-C5O68_06090;Name=C5O68_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06090 PTQV01000036.1 Protein Homology CDS 12913 13380 . + 0 ID=cds-RJP82117.1;Parent=gene-C5O68_06090;Dbxref=NCBI_GP:RJP82117.1;Name=RJP82117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357755.1;locus_tag=C5O68_06090;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=RJP82117.1;transl_table=11 PTQV01000036.1 Genbank gene 13705 15654 . - . ID=gene-C5O68_06095;Name=C5O68_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06095 PTQV01000036.1 Protein Homology CDS 13705 15654 . - 0 ID=cds-RJP82166.1;Parent=gene-C5O68_06095;Dbxref=NCBI_GP:RJP82166.1;Name=RJP82166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447027.1;locus_tag=C5O68_06095;product=DNA mismatch repair endonuclease MutL;protein_id=RJP82166.1;transl_table=11 PTQV01000036.1 Genbank pseudogene 15679 15771 . - . ID=gene-C5O68_06100;Name=C5O68_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06100;pseudo=true PTQV01000036.1 Protein Homology CDS 15679 15771 . - 0 ID=cds-C5O68_06100;Parent=gene-C5O68_06100;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447028.1;locus_tag=C5O68_06100;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000036.1 Genbank gene 15861 16301 . + . ID=gene-C5O68_06105;Name=C5O68_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06105 PTQV01000036.1 Protein Homology CDS 15861 16301 . + 0 ID=cds-RJP82118.1;Parent=gene-C5O68_06105;Dbxref=NCBI_GP:RJP82118.1;Name=RJP82118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447029.1;locus_tag=C5O68_06105;product=LytTR family transcriptional regulator;protein_id=RJP82118.1;transl_table=11 PTQV01000036.1 Genbank gene 16298 16756 . + . ID=gene-C5O68_06110;Name=C5O68_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06110 PTQV01000036.1 Protein Homology CDS 16298 16756 . + 0 ID=cds-RJP82119.1;Parent=gene-C5O68_06110;Dbxref=NCBI_GP:RJP82119.1;Name=RJP82119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357752.1;locus_tag=C5O68_06110;product=DUF3021 domain-containing protein;protein_id=RJP82119.1;transl_table=11 PTQV01000036.1 Genbank pseudogene 16828 16902 . + . ID=gene-C5O68_06115;Name=C5O68_06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06115;pseudo=true PTQV01000036.1 Protein Homology CDS 16828 16902 . + 0 ID=cds-C5O68_06115;Parent=gene-C5O68_06115;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_06115;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000036.1 Genbank gene 17169 18431 . + . ID=gene-C5O68_06120;Name=C5O68_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06120 PTQV01000036.1 Protein Homology CDS 17169 18431 . + 0 ID=cds-RJP82120.1;Parent=gene-C5O68_06120;Dbxref=NCBI_GP:RJP82120.1;Name=RJP82120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357751.1;locus_tag=C5O68_06120;product=hypothetical protein;protein_id=RJP82120.1;transl_table=11 PTQV01000036.1 Genbank gene 18611 19081 . - . ID=gene-C5O68_06125;Name=C5O68_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06125 PTQV01000036.1 Protein Homology CDS 18611 19081 . - 0 ID=cds-RJP82121.1;Parent=gene-C5O68_06125;Dbxref=NCBI_GP:RJP82121.1;Name=RJP82121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357750.2;locus_tag=C5O68_06125;product=ribonucleotide reductase assembly protein NrdI;protein_id=RJP82121.1;transl_table=11 PTQV01000036.1 Genbank gene 19159 19692 . - . ID=gene-C5O68_06130;Name=C5O68_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06130 PTQV01000036.1 Protein Homology CDS 19159 19692 . - 0 ID=cds-RJP82122.1;Parent=gene-C5O68_06130;Dbxref=NCBI_GP:RJP82122.1;Name=RJP82122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399110.1;locus_tag=C5O68_06130;product=ABC transporter permease;protein_id=RJP82122.1;transl_table=11 PTQV01000036.1 Genbank gene 19753 21039 . - . ID=gene-C5O68_06135;Name=C5O68_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06135 PTQV01000036.1 Protein Homology CDS 19753 21039 . - 0 ID=cds-RJP82123.1;Parent=gene-C5O68_06135;Dbxref=NCBI_GP:RJP82123.1;Name=RJP82123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357748.1;locus_tag=C5O68_06135;product=DNA-binding response regulator;protein_id=RJP82123.1;transl_table=11 PTQV01000036.1 Genbank gene 21051 22721 . - . ID=gene-C5O68_06140;Name=C5O68_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06140 PTQV01000036.1 Protein Homology CDS 21051 22721 . - 0 ID=cds-RJP82124.1;Parent=gene-C5O68_06140;Dbxref=NCBI_GP:RJP82124.1;Name=RJP82124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357747.2;locus_tag=C5O68_06140;product=sensor histidine kinase;protein_id=RJP82124.1;transl_table=11 PTQV01000036.1 Genbank gene 22699 23313 . - . ID=gene-C5O68_06145;Name=C5O68_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06145 PTQV01000036.1 Protein Homology CDS 22699 23313 . - 0 ID=cds-RJP82125.1;Parent=gene-C5O68_06145;Dbxref=NCBI_GP:RJP82125.1;Name=RJP82125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447035.1;locus_tag=C5O68_06145;product=DUF624 domain-containing protein;protein_id=RJP82125.1;transl_table=11 PTQV01000036.1 Genbank gene 23448 24017 . + . ID=gene-C5O68_06150;Name=C5O68_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06150 PTQV01000036.1 Protein Homology CDS 23448 24017 . + 0 ID=cds-RJP82126.1;Parent=gene-C5O68_06150;Dbxref=NCBI_GP:RJP82126.1;Name=RJP82126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357745.1;locus_tag=C5O68_06150;product=hypothetical protein;protein_id=RJP82126.1;transl_table=11 PTQV01000036.1 Genbank gene 24047 24739 . - . ID=gene-C5O68_06155;Name=C5O68_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06155 PTQV01000036.1 Protein Homology CDS 24047 24739 . - 0 ID=cds-RJP82127.1;Parent=gene-C5O68_06155;Dbxref=NCBI_GP:RJP82127.1;Name=RJP82127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447037.1;locus_tag=C5O68_06155;product=ABC transporter permease;protein_id=RJP82127.1;transl_table=11 PTQV01000036.1 Genbank gene 24741 25802 . - . ID=gene-C5O68_06160;Name=C5O68_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06160 PTQV01000036.1 Protein Homology CDS 24741 25802 . - 0 ID=cds-RJP82128.1;Parent=gene-C5O68_06160;Dbxref=NCBI_GP:RJP82128.1;Name=RJP82128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357743.1;locus_tag=C5O68_06160;product=methionine ABC transporter ATP-binding protein;protein_id=RJP82128.1;transl_table=11 PTQV01000036.1 Genbank gene 25795 27168 . - . ID=gene-C5O68_06165;Name=C5O68_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06165 PTQV01000036.1 Protein Homology CDS 25795 27168 . - 0 ID=cds-RJP82129.1;Parent=gene-C5O68_06165;Dbxref=NCBI_GP:RJP82129.1;Name=RJP82129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447039.1;locus_tag=C5O68_06165;product=peptidase M20;protein_id=RJP82129.1;transl_table=11 PTQV01000036.1 Genbank gene 27268 28122 . - . ID=gene-C5O68_06170;Name=C5O68_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06170 PTQV01000036.1 Protein Homology CDS 27268 28122 . - 0 ID=cds-RJP82130.1;Parent=gene-C5O68_06170;Dbxref=NCBI_GP:RJP82130.1;Name=RJP82130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357741.1;locus_tag=C5O68_06170;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=RJP82130.1;transl_table=11 PTQV01000036.1 Genbank gene 28276 29106 . - . ID=gene-C5O68_06175;Name=C5O68_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06175 PTQV01000036.1 Protein Homology CDS 28276 29106 . - 0 ID=cds-RJP82131.1;Parent=gene-C5O68_06175;Dbxref=NCBI_GP:RJP82131.1;Name=RJP82131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357740.1;locus_tag=C5O68_06175;product=amino acid ABC transporter substrate-binding protein;protein_id=RJP82131.1;transl_table=11 PTQV01000036.1 Genbank gene 29363 29686 . - . ID=gene-C5O68_06180;Name=C5O68_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06180 PTQV01000036.1 Protein Homology CDS 29363 29686 . - 0 ID=cds-RJP82132.1;Parent=gene-C5O68_06180;Dbxref=NCBI_GP:RJP82132.1;Name=RJP82132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447043.1;locus_tag=C5O68_06180;product=AzlD domain-containing protein;protein_id=RJP82132.1;transl_table=11 PTQV01000036.1 Genbank gene 29676 30371 . - . ID=gene-C5O68_06185;Name=C5O68_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06185 PTQV01000036.1 Protein Homology CDS 29676 30371 . - 0 ID=cds-RJP82133.1;Parent=gene-C5O68_06185;Dbxref=NCBI_GP:RJP82133.1;Name=RJP82133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447044.1;locus_tag=C5O68_06185;product=branched-chain amino acid ABC transporter permease;protein_id=RJP82133.1;transl_table=11 PTQV01000036.1 Genbank gene 30530 31759 . - . ID=gene-C5O68_06190;Name=C5O68_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06190 PTQV01000036.1 Protein Homology CDS 30530 31759 . - 0 ID=cds-RJP82134.1;Parent=gene-C5O68_06190;Dbxref=NCBI_GP:RJP82134.1;Name=RJP82134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357738.1;locus_tag=C5O68_06190;product=hypothetical protein;protein_id=RJP82134.1;transl_table=11 PTQV01000036.1 Genbank gene 31905 32573 . - . ID=gene-C5O68_06195;Name=C5O68_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06195 PTQV01000036.1 Protein Homology CDS 31905 32573 . - 0 ID=cds-RJP82135.1;Parent=gene-C5O68_06195;Dbxref=NCBI_GP:RJP82135.1;Name=RJP82135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758145.1;locus_tag=C5O68_06195;product=CPBP family intramembrane metalloprotease;protein_id=RJP82135.1;transl_table=11 PTQV01000036.1 Genbank gene 32640 32843 . - . ID=gene-C5O68_06200;Name=C5O68_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06200 PTQV01000036.1 Protein Homology CDS 32640 32843 . - 0 ID=cds-RJP82136.1;Parent=gene-C5O68_06200;Dbxref=NCBI_GP:RJP82136.1;Name=RJP82136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933472.1;locus_tag=C5O68_06200;product=hypothetical protein;protein_id=RJP82136.1;transl_table=11 PTQV01000036.1 Genbank gene 33163 33684 . - . ID=gene-C5O68_06205;Name=C5O68_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06205 PTQV01000036.1 Protein Homology CDS 33163 33684 . - 0 ID=cds-RJP82137.1;Parent=gene-C5O68_06205;Dbxref=NCBI_GP:RJP82137.1;Name=RJP82137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145892.1;locus_tag=C5O68_06205;product=PadR family transcriptional regulator;protein_id=RJP82137.1;transl_table=11 PTQV01000036.1 Genbank gene 33687 34046 . - . ID=gene-C5O68_06210;Name=C5O68_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06210 PTQV01000036.1 Protein Homology CDS 33687 34046 . - 0 ID=cds-RJP82167.1;Parent=gene-C5O68_06210;Dbxref=NCBI_GP:RJP82167.1;Name=RJP82167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017770889.1;locus_tag=C5O68_06210;product=hypothetical protein;protein_id=RJP82167.1;transl_table=11 PTQV01000036.1 Genbank gene 34108 35223 . - . ID=gene-C5O68_06215;Name=C5O68_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06215 PTQV01000036.1 Protein Homology CDS 34108 35223 . - 0 ID=cds-RJP82138.1;Parent=gene-C5O68_06215;Dbxref=NCBI_GP:RJP82138.1;Name=RJP82138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009219705.1;locus_tag=C5O68_06215;product=MFS transporter;protein_id=RJP82138.1;transl_table=11 PTQV01000036.1 Genbank gene 35216 35710 . - . ID=gene-C5O68_06220;Name=C5O68_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06220 PTQV01000036.1 GeneMarkS+ CDS 35216 35710 . - 0 ID=cds-RJP82139.1;Parent=gene-C5O68_06220;Dbxref=NCBI_GP:RJP82139.1;Name=RJP82139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06220;product=hypothetical protein;protein_id=RJP82139.1;transl_table=11 PTQV01000036.1 Genbank gene 35724 36314 . - . ID=gene-C5O68_06225;Name=C5O68_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06225 PTQV01000036.1 GeneMarkS+ CDS 35724 36314 . - 0 ID=cds-RJP82140.1;Parent=gene-C5O68_06225;Dbxref=NCBI_GP:RJP82140.1;Name=RJP82140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06225;product=hypothetical protein;protein_id=RJP82140.1;transl_table=11 PTQV01000036.1 Genbank gene 36311 36961 . - . ID=gene-C5O68_06230;Name=C5O68_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06230 PTQV01000036.1 Protein Homology CDS 36311 36961 . - 0 ID=cds-RJP82141.1;Parent=gene-C5O68_06230;Dbxref=NCBI_GP:RJP82141.1;Name=RJP82141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13561.4;locus_tag=C5O68_06230;product=SDR family oxidoreductase;protein_id=RJP82141.1;transl_table=11 PTQV01000036.1 Genbank gene 36954 37847 . - . ID=gene-C5O68_06235;Name=C5O68_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06235 PTQV01000036.1 GeneMarkS+ CDS 36954 37847 . - 0 ID=cds-RJP82142.1;Parent=gene-C5O68_06235;Dbxref=NCBI_GP:RJP82142.1;Name=RJP82142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06235;product=hypothetical protein;protein_id=RJP82142.1;transl_table=11 PTQV01000036.1 Genbank gene 37851 39026 . - . ID=gene-C5O68_06240;Name=C5O68_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06240 PTQV01000036.1 Protein Homology CDS 37851 39026 . - 0 ID=cds-RJP82143.1;Parent=gene-C5O68_06240;Dbxref=NCBI_GP:RJP82143.1;Name=RJP82143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02801.20;locus_tag=C5O68_06240;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=RJP82143.1;transl_table=11 PTQV01000036.1 Genbank gene 39016 39252 . - . ID=gene-C5O68_06245;Name=C5O68_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06245 PTQV01000036.1 Protein Homology CDS 39016 39252 . - 0 ID=cds-RJP82144.1;Parent=gene-C5O68_06245;Dbxref=NCBI_GP:RJP82144.1;Name=RJP82144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;locus_tag=C5O68_06245;product=acyl carrier protein;protein_id=RJP82144.1;transl_table=11 PTQV01000036.1 Genbank gene 39239 39799 . - . ID=gene-C5O68_06250;Name=C5O68_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06250 PTQV01000036.1 GeneMarkS+ CDS 39239 39799 . - 0 ID=cds-RJP82145.1;Parent=gene-C5O68_06250;Dbxref=NCBI_GP:RJP82145.1;Name=RJP82145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06250;product=GNAT family N-acetyltransferase;protein_id=RJP82145.1;transl_table=11 PTQV01000036.1 Genbank pseudogene 40254 40384 . - . ID=gene-C5O68_06255;Name=C5O68_06255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06255;pseudo=true PTQV01000036.1 Protein Homology CDS 40254 40384 . - 0 ID=cds-C5O68_06255;Parent=gene-C5O68_06255;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808511.1;locus_tag=C5O68_06255;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 PTQV01000036.1 Genbank gene 40463 41719 . - . ID=gene-C5O68_06260;Name=C5O68_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06260 PTQV01000036.1 Protein Homology CDS 40463 41719 . - 0 ID=cds-RJP82146.1;Parent=gene-C5O68_06260;Dbxref=NCBI_GP:RJP82146.1;Name=RJP82146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722643.1;locus_tag=C5O68_06260;product=lantibiotic transporter;protein_id=RJP82146.1;transl_table=11 PTQV01000036.1 Genbank gene 41748 43025 . - . ID=gene-C5O68_06265;Name=C5O68_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06265 PTQV01000036.1 Protein Homology CDS 41748 43025 . - 0 ID=cds-RJP82147.1;Parent=gene-C5O68_06265;Dbxref=NCBI_GP:RJP82147.1;Name=RJP82147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947801.1;locus_tag=C5O68_06265;product=lantibiotic biosynthesis protein;protein_id=RJP82147.1;transl_table=11 PTQV01000036.1 Genbank gene 43009 45924 . - . ID=gene-C5O68_06270;Name=C5O68_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06270 PTQV01000036.1 Protein Homology CDS 43009 45924 . - 0 ID=cds-RJP82148.1;Parent=gene-C5O68_06270;Dbxref=NCBI_GP:RJP82148.1;Name=RJP82148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472732.1;locus_tag=C5O68_06270;product=lantibiotic biosynthesis protein;protein_id=RJP82148.1;transl_table=11 PTQV01000036.1 Genbank gene 45984 46088 . - . ID=gene-C5O68_06275;Name=C5O68_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06275 PTQV01000036.1 Protein Homology CDS 45984 46088 . - 0 ID=cds-RJP82149.1;Parent=gene-C5O68_06275;Dbxref=NCBI_GP:RJP82149.1;Name=RJP82149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011225312.1;locus_tag=C5O68_06275;product=bacteriocin;protein_id=RJP82149.1;transl_table=11 PTQV01000036.1 Genbank gene 46378 47241 . - . ID=gene-C5O68_06280;Name=C5O68_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06280 PTQV01000036.1 Protein Homology CDS 46378 47241 . - 0 ID=cds-RJP82150.1;Parent=gene-C5O68_06280;Dbxref=NCBI_GP:RJP82150.1;Name=RJP82150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357734.1;locus_tag=C5O68_06280;product=MutR family transcriptional regulator;protein_id=RJP82150.1;transl_table=11 PTQV01000036.1 Genbank gene 47346 48356 . - . ID=gene-C5O68_06285;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=C5O68_06285 PTQV01000036.1 Protein Homology CDS 47346 48356 . - 0 ID=cds-RJP82151.1;Parent=gene-C5O68_06285;Dbxref=NCBI_GP:RJP82151.1;Name=RJP82151.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357725.1;locus_tag=C5O68_06285;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=RJP82151.1;transl_table=11 PTQV01000036.1 Genbank gene 48346 48783 . - . ID=gene-C5O68_06290;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=C5O68_06290 PTQV01000036.1 Protein Homology CDS 48346 48783 . - 0 ID=cds-RJP82152.1;Parent=gene-C5O68_06290;Dbxref=NCBI_GP:RJP82152.1;Name=RJP82152.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357724.1;locus_tag=C5O68_06290;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=RJP82152.1;transl_table=11 PTQV01000036.1 Genbank gene 48780 49463 . - . ID=gene-C5O68_06295;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=C5O68_06295 PTQV01000036.1 Protein Homology CDS 48780 49463 . - 0 ID=cds-RJP82153.1;Parent=gene-C5O68_06295;Dbxref=NCBI_GP:RJP82153.1;Name=RJP82153.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447049.1;locus_tag=C5O68_06295;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=RJP82153.1;transl_table=11 PTQV01000036.1 Genbank gene 49641 49826 . + . ID=gene-C5O68_06300;Name=C5O68_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06300 PTQV01000036.1 Protein Homology CDS 49641 49826 . + 0 ID=cds-RJP82154.1;Parent=gene-C5O68_06300;Dbxref=NCBI_GP:RJP82154.1;Name=RJP82154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357722.1;locus_tag=C5O68_06300;product=class IIb bacteriocin%2C lactobin A/cerein 7B family;protein_id=RJP82154.1;transl_table=11 PTQV01000036.1 Genbank gene 49828 49980 . + . ID=gene-C5O68_06305;Name=C5O68_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06305 PTQV01000036.1 Protein Homology CDS 49828 49980 . + 0 ID=cds-RJP82155.1;Parent=gene-C5O68_06305;Dbxref=NCBI_GP:RJP82155.1;Name=RJP82155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357721.1;locus_tag=C5O68_06305;product=bacteriocin;protein_id=RJP82155.1;transl_table=11 PTQV01000036.1 Genbank gene 49974 50171 . + . ID=gene-C5O68_06310;Name=C5O68_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06310 PTQV01000036.1 Protein Homology CDS 49974 50171 . + 0 ID=cds-RJP82156.1;Parent=gene-C5O68_06310;Dbxref=NCBI_GP:RJP82156.1;Name=RJP82156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315026.1;locus_tag=C5O68_06310;product=hypothetical protein;protein_id=RJP82156.1;transl_table=11 PTQV01000036.1 Genbank pseudogene 50190 50305 . + . ID=gene-C5O68_06315;Name=C5O68_06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06315;pseudo=true PTQV01000036.1 Protein Homology CDS 50190 50305 . + 0 ID=cds-C5O68_06315;Parent=gene-C5O68_06315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001823330.1;locus_tag=C5O68_06315;product=competence protein;pseudo=true;transl_table=11 PTQV01000036.1 Genbank pseudogene 50302 50516 . - . ID=gene-C5O68_06320;Name=C5O68_06320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06320;pseudo=true PTQV01000036.1 Protein Homology CDS 50302 50516 . - 0 ID=cds-C5O68_06320;Parent=gene-C5O68_06320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447054.1;locus_tag=C5O68_06320;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000036.1 Genbank gene 50750 50965 . - . ID=gene-C5O68_06325;Name=C5O68_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06325 PTQV01000036.1 Protein Homology CDS 50750 50965 . - 0 ID=cds-RJP82157.1;Parent=gene-C5O68_06325;Dbxref=NCBI_GP:RJP82157.1;Name=RJP82157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527686.1;locus_tag=C5O68_06325;product=hypothetical protein;protein_id=RJP82157.1;transl_table=11 PTQV01000036.1 Genbank gene 50955 51224 . - . ID=gene-C5O68_06330;Name=C5O68_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06330 PTQV01000036.1 GeneMarkS+ CDS 50955 51224 . - 0 ID=cds-RJP82158.1;Parent=gene-C5O68_06330;Dbxref=NCBI_GP:RJP82158.1;Name=RJP82158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_06330;product=hypothetical protein;protein_id=RJP82158.1;transl_table=11 PTQV01000036.1 Genbank gene 51488 51721 . + . ID=gene-C5O68_06335;Name=C5O68_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06335 PTQV01000036.1 Protein Homology CDS 51488 51721 . + 0 ID=cds-RJP82159.1;Parent=gene-C5O68_06335;Dbxref=NCBI_GP:RJP82159.1;Name=RJP82159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357720.1;locus_tag=C5O68_06335;product=hypothetical protein;protein_id=RJP82159.1;transl_table=11 PTQV01000036.1 Genbank gene 51723 53402 . + . ID=gene-C5O68_06340;Name=C5O68_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06340 PTQV01000036.1 Protein Homology CDS 51723 53402 . + 0 ID=cds-RJP82160.1;Parent=gene-C5O68_06340;Dbxref=NCBI_GP:RJP82160.1;Name=RJP82160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447056.1;locus_tag=C5O68_06340;product=ribonuclease J;protein_id=RJP82160.1;transl_table=11 PTQV01000036.1 Genbank gene 53754 55667 . - . ID=gene-C5O68_06345;Name=C5O68_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06345 PTQV01000036.1 Protein Homology CDS 53754 55667 . - 0 ID=cds-RJP82161.1;Parent=gene-C5O68_06345;Dbxref=NCBI_GP:RJP82161.1;Name=RJP82161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447057.1;locus_tag=C5O68_06345;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=RJP82161.1;transl_table=11 PTQV01000036.1 Genbank gene 55677 56159 . - . ID=gene-C5O68_06350;Name=C5O68_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06350 PTQV01000036.1 Protein Homology CDS 55677 56159 . - 0 ID=cds-RJP82162.1;Parent=gene-C5O68_06350;Dbxref=NCBI_GP:RJP82162.1;Name=RJP82162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357717.1;locus_tag=C5O68_06350;product=NUDIX hydrolase;protein_id=RJP82162.1;transl_table=11 PTQV01000036.1 Genbank gene 56272 57393 . - . ID=gene-C5O68_06355;Name=C5O68_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06355 PTQV01000036.1 Protein Homology CDS 56272 57393 . - 0 ID=cds-RJP82163.1;Parent=gene-C5O68_06355;Dbxref=NCBI_GP:RJP82163.1;Name=RJP82163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447059.1;locus_tag=C5O68_06355;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=RJP82163.1;transl_table=11 PTQV01000036.1 Genbank gene 57793 58362 . - . ID=gene-C5O68_06360;Name=C5O68_06360;end_range=58362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06360;partial=true PTQV01000036.1 Protein Homology CDS 57793 58362 . - 0 ID=cds-RJP82164.1;Parent=gene-C5O68_06360;Dbxref=NCBI_GP:RJP82164.1;Name=RJP82164.1;end_range=58362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357715.1;locus_tag=C5O68_06360;partial=true;product=cell surface protein;protein_id=RJP82164.1;transl_table=11 ##sequence-region PTQV01000037.1 1 41036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000037.1 Genbank region 1 41036 . + . ID=PTQV01000037.1:1..41036;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000037.1 Genbank gene 1 93 . + . ID=gene-C5O68_06365;Name=C5O68_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06365;partial=true;start_range=.,1 PTQV01000037.1 Protein Homology CDS 1 93 . + 0 ID=cds-RJP81770.1;Parent=gene-C5O68_06365;Dbxref=NCBI_GP:RJP81770.1;Name=RJP81770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811927.1;locus_tag=C5O68_06365;partial=true;product=chlorohydrolase;protein_id=RJP81770.1;start_range=.,1;transl_table=11 PTQV01000037.1 Genbank gene 133 1137 . + . ID=gene-C5O68_06370;Name=C5O68_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06370 PTQV01000037.1 Protein Homology CDS 133 1137 . + 0 ID=cds-RJP81771.1;Parent=gene-C5O68_06370;Dbxref=NCBI_GP:RJP81771.1;Name=RJP81771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446100.1;locus_tag=C5O68_06370;product=peptide ABC transporter substrate-binding protein;protein_id=RJP81771.1;transl_table=11 PTQV01000037.1 Genbank gene 1206 2072 . + . ID=gene-C5O68_06375;Name=C5O68_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06375 PTQV01000037.1 Protein Homology CDS 1206 2072 . + 0 ID=cds-RJP81772.1;Parent=gene-C5O68_06375;Dbxref=NCBI_GP:RJP81772.1;Name=RJP81772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446101.1;locus_tag=C5O68_06375;product=branched-chain amino acid ABC transporter permease;protein_id=RJP81772.1;transl_table=11 PTQV01000037.1 Genbank gene 2069 2827 . + . ID=gene-C5O68_06380;Name=C5O68_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06380 PTQV01000037.1 Protein Homology CDS 2069 2827 . + 0 ID=cds-RJP81773.1;Parent=gene-C5O68_06380;Dbxref=NCBI_GP:RJP81773.1;Name=RJP81773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446102.1;locus_tag=C5O68_06380;product=phosphonate ABC transporter ATP-binding protein;protein_id=RJP81773.1;transl_table=11 PTQV01000037.1 Genbank gene 2917 4677 . + . ID=gene-C5O68_06385;Name=C5O68_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06385 PTQV01000037.1 Protein Homology CDS 2917 4677 . + 0 ID=cds-RJP81774.1;Parent=gene-C5O68_06385;Dbxref=NCBI_GP:RJP81774.1;Name=RJP81774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446103.1;locus_tag=C5O68_06385;product=DNA primase;protein_id=RJP81774.1;transl_table=11 PTQV01000037.1 Genbank gene 4680 5789 . + . ID=gene-C5O68_06390;Name=C5O68_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06390 PTQV01000037.1 Protein Homology CDS 4680 5789 . + 0 ID=cds-RJP81775.1;Parent=gene-C5O68_06390;Dbxref=NCBI_GP:RJP81775.1;Name=RJP81775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358573.1;locus_tag=C5O68_06390;product=RNA polymerase sigma factor SigA;protein_id=RJP81775.1;transl_table=11 PTQV01000037.1 Genbank gene 5804 6133 . + . ID=gene-C5O68_06395;Name=C5O68_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06395 PTQV01000037.1 Protein Homology CDS 5804 6133 . + 0 ID=cds-RJP81826.1;Parent=gene-C5O68_06395;Dbxref=NCBI_GP:RJP81826.1;Name=RJP81826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446105.1;locus_tag=C5O68_06395;product=metal-sulfur cluster assembly factor;protein_id=RJP81826.1;transl_table=11 PTQV01000037.1 Genbank gene 6275 7291 . + . ID=gene-C5O68_06400;Name=C5O68_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06400 PTQV01000037.1 Protein Homology CDS 6275 7291 . + 0 ID=cds-RJP81827.1;Parent=gene-C5O68_06400;Dbxref=NCBI_GP:RJP81827.1;Name=RJP81827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446106.1;locus_tag=C5O68_06400;product=glycosyltransferase;protein_id=RJP81827.1;transl_table=11 PTQV01000037.1 Genbank gene 7307 8632 . + . ID=gene-C5O68_06405;Name=C5O68_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06405 PTQV01000037.1 Protein Homology CDS 7307 8632 . + 0 ID=cds-RJP81776.1;Parent=gene-C5O68_06405;Dbxref=NCBI_GP:RJP81776.1;Name=RJP81776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358576.1;locus_tag=C5O68_06405;product=1%2C2-diacylglycerol 3-glucosyltransferase;protein_id=RJP81776.1;transl_table=11 PTQV01000037.1 Genbank gene 8662 8838 . + . ID=gene-C5O68_06410;Name=C5O68_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06410 PTQV01000037.1 Protein Homology CDS 8662 8838 . + 0 ID=cds-RJP81828.1;Parent=gene-C5O68_06410;Dbxref=NCBI_GP:RJP81828.1;Name=RJP81828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446108.1;locus_tag=C5O68_06410;product=PspC family transcriptional regulator;protein_id=RJP81828.1;transl_table=11 PTQV01000037.1 Genbank gene 8897 9031 . + . ID=gene-C5O68_06415;Name=C5O68_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06415 PTQV01000037.1 Protein Homology CDS 8897 9031 . + 0 ID=cds-RJP81777.1;Parent=gene-C5O68_06415;Dbxref=NCBI_GP:RJP81777.1;Name=RJP81777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446109.1;locus_tag=C5O68_06415;product=DUF4044 domain-containing protein;protein_id=RJP81777.1;transl_table=11 PTQV01000037.1 Genbank gene 9095 10405 . + . ID=gene-C5O68_06420;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=C5O68_06420 PTQV01000037.1 Protein Homology CDS 9095 10405 . + 0 ID=cds-RJP81778.1;Parent=gene-C5O68_06420;Dbxref=NCBI_GP:RJP81778.1;Name=RJP81778.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446110.1;locus_tag=C5O68_06420;product=GTPase ObgE;protein_id=RJP81778.1;transl_table=11 PTQV01000037.1 Genbank gene 10415 10573 . + . ID=gene-C5O68_06425;Name=C5O68_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06425 PTQV01000037.1 Protein Homology CDS 10415 10573 . + 0 ID=cds-RJP81779.1;Parent=gene-C5O68_06425;Dbxref=NCBI_GP:RJP81779.1;Name=RJP81779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446111.1;locus_tag=C5O68_06425;product=hypothetical protein;protein_id=RJP81779.1;transl_table=11 PTQV01000037.1 Genbank gene 11634 12893 . + . ID=gene-C5O68_06430;Name=C5O68_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06430 PTQV01000037.1 Protein Homology CDS 11634 12893 . + 0 ID=cds-RJP81780.1;Parent=gene-C5O68_06430;Dbxref=NCBI_GP:RJP81780.1;Name=RJP81780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001227095.1;locus_tag=C5O68_06430;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=RJP81780.1;transl_table=11 PTQV01000037.1 Genbank gene 12909 13442 . + . ID=gene-C5O68_06435;Name=C5O68_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06435 PTQV01000037.1 Protein Homology CDS 12909 13442 . + 0 ID=cds-RJP81781.1;Parent=gene-C5O68_06435;Dbxref=NCBI_GP:RJP81781.1;Name=RJP81781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446267.1;locus_tag=C5O68_06435;product=RimJ/RimL family protein N-acetyltransferase;protein_id=RJP81781.1;transl_table=11 PTQV01000037.1 Genbank gene 13435 14712 . + . ID=gene-C5O68_06440;Name=C5O68_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06440 PTQV01000037.1 Protein Homology CDS 13435 14712 . + 0 ID=cds-RJP81782.1;Parent=gene-C5O68_06440;Dbxref=NCBI_GP:RJP81782.1;Name=RJP81782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358585.1;locus_tag=C5O68_06440;product=hypothetical protein;protein_id=RJP81782.1;transl_table=11 PTQV01000037.1 Genbank gene 14728 15588 . + . ID=gene-C5O68_06445;Name=C5O68_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06445 PTQV01000037.1 Protein Homology CDS 14728 15588 . + 0 ID=cds-RJP81783.1;Parent=gene-C5O68_06445;Dbxref=NCBI_GP:RJP81783.1;Name=RJP81783.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014622584.1;locus_tag=C5O68_06445;product=methionine aminopeptidase;protein_id=RJP81783.1;transl_table=11 PTQV01000037.1 Genbank gene 15813 15941 . + . ID=gene-C5O68_06450;Name=C5O68_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06450 PTQV01000037.1 Protein Homology CDS 15813 15941 . + 0 ID=cds-RJP81829.1;Parent=gene-C5O68_06450;Dbxref=NCBI_GP:RJP81829.1;Name=RJP81829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284964.1;locus_tag=C5O68_06450;product=galactose-6-phosphate isomerase;protein_id=RJP81829.1;transl_table=11 PTQV01000037.1 Genbank gene 16105 18396 . + . ID=gene-C5O68_06455;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=C5O68_06455 PTQV01000037.1 Protein Homology CDS 16105 18396 . + 0 ID=cds-RJP81784.1;Parent=gene-C5O68_06455;Dbxref=NCBI_GP:RJP81784.1;Name=RJP81784.1;gbkey=CDS;gene=pcrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446302.1;locus_tag=C5O68_06455;product=DNA helicase PcrA;protein_id=RJP81784.1;transl_table=11 PTQV01000037.1 Genbank gene 18439 19119 . + . ID=gene-C5O68_06460;Name=C5O68_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06460 PTQV01000037.1 Protein Homology CDS 18439 19119 . + 0 ID=cds-RJP81785.1;Parent=gene-C5O68_06460;Dbxref=NCBI_GP:RJP81785.1;Name=RJP81785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446301.1;locus_tag=C5O68_06460;product=hypothetical protein;protein_id=RJP81785.1;transl_table=11 PTQV01000037.1 Genbank gene 19116 19805 . - . ID=gene-C5O68_06465;Name=C5O68_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06465 PTQV01000037.1 Protein Homology CDS 19116 19805 . - 0 ID=cds-RJP81786.1;Parent=gene-C5O68_06465;Dbxref=NCBI_GP:RJP81786.1;Name=RJP81786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358591.1;locus_tag=C5O68_06465;product=gamma-glutamyl hydrolase;protein_id=RJP81786.1;transl_table=11 PTQV01000037.1 Genbank gene 19823 20464 . - . ID=gene-C5O68_06470;Name=C5O68_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06470 PTQV01000037.1 Protein Homology CDS 19823 20464 . - 0 ID=cds-RJP81787.1;Parent=gene-C5O68_06470;Dbxref=NCBI_GP:RJP81787.1;Name=RJP81787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358592.1;locus_tag=C5O68_06470;product=redox-sensing transcriptional repressor Rex;protein_id=RJP81787.1;transl_table=11 PTQV01000037.1 Genbank gene 20547 20798 . - . ID=gene-C5O68_06475;Name=C5O68_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06475 PTQV01000037.1 Protein Homology CDS 20547 20798 . - 0 ID=cds-RJP81788.1;Parent=gene-C5O68_06475;Dbxref=NCBI_GP:RJP81788.1;Name=RJP81788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446298.1;locus_tag=C5O68_06475;product=DUF4649 domain-containing protein;protein_id=RJP81788.1;transl_table=11 PTQV01000037.1 Genbank gene 20770 21117 . - . ID=gene-C5O68_06480;Name=C5O68_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06480 PTQV01000037.1 Protein Homology CDS 20770 21117 . - 0 ID=cds-RJP81789.1;Parent=gene-C5O68_06480;Dbxref=NCBI_GP:RJP81789.1;Name=RJP81789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358594.1;locus_tag=C5O68_06480;product=cysteine desulfurase;protein_id=RJP81789.1;transl_table=11 PTQV01000037.1 Genbank gene 21122 22237 . - . ID=gene-C5O68_06485;Name=C5O68_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06485 PTQV01000037.1 Protein Homology CDS 21122 22237 . - 0 ID=cds-RJP81790.1;Parent=gene-C5O68_06485;Dbxref=NCBI_GP:RJP81790.1;Name=RJP81790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358595.1;locus_tag=C5O68_06485;product=cysteine desulfurase;protein_id=RJP81790.1;transl_table=11 PTQV01000037.1 Genbank gene 22247 23206 . - . ID=gene-C5O68_06490;Name=C5O68_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06490 PTQV01000037.1 Protein Homology CDS 22247 23206 . - 0 ID=cds-RJP81791.1;Parent=gene-C5O68_06490;Dbxref=NCBI_GP:RJP81791.1;Name=RJP81791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358596.1;locus_tag=C5O68_06490;product=ribose-phosphate diphosphokinase;protein_id=RJP81791.1;transl_table=11 PTQV01000037.1 Genbank gene 23319 23888 . - . ID=gene-C5O68_06495;Name=C5O68_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06495 PTQV01000037.1 Protein Homology CDS 23319 23888 . - 0 ID=cds-RJP81792.1;Parent=gene-C5O68_06495;Dbxref=NCBI_GP:RJP81792.1;Name=RJP81792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358597.1;locus_tag=C5O68_06495;product=CYTH domain-containing protein;protein_id=RJP81792.1;transl_table=11 PTQV01000037.1 Genbank gene 24020 25165 . - . ID=gene-C5O68_06500;Name=C5O68_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06500 PTQV01000037.1 Protein Homology CDS 24020 25165 . - 0 ID=cds-RJP81793.1;Parent=gene-C5O68_06500;Dbxref=NCBI_GP:RJP81793.1;Name=RJP81793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592975.1;locus_tag=C5O68_06500;product=site-specific integrase;protein_id=RJP81793.1;transl_table=11 PTQV01000037.1 Genbank gene 25664 26554 . - . ID=gene-C5O68_06505;Name=C5O68_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06505 PTQV01000037.1 Protein Homology CDS 25664 26554 . - 0 ID=cds-RJP81794.1;Parent=gene-C5O68_06505;Dbxref=NCBI_GP:RJP81794.1;Name=RJP81794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089905.1;locus_tag=C5O68_06505;product=DNA-binding protein;protein_id=RJP81794.1;transl_table=11 PTQV01000037.1 Genbank gene 26551 27357 . - . ID=gene-C5O68_06510;Name=C5O68_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06510 PTQV01000037.1 Protein Homology CDS 26551 27357 . - 0 ID=cds-RJP81795.1;Parent=gene-C5O68_06510;Dbxref=NCBI_GP:RJP81795.1;Name=RJP81795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149685.1;locus_tag=C5O68_06510;product=XRE family transcriptional regulator;protein_id=RJP81795.1;transl_table=11 PTQV01000037.1 Genbank gene 27500 27637 . + . ID=gene-C5O68_06515;Name=C5O68_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06515 PTQV01000037.1 Protein Homology CDS 27500 27637 . + 0 ID=cds-RJP81796.1;Parent=gene-C5O68_06515;Dbxref=NCBI_GP:RJP81796.1;Name=RJP81796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446472.1;locus_tag=C5O68_06515;product=hypothetical protein;protein_id=RJP81796.1;transl_table=11 PTQV01000037.1 Genbank gene 27806 28000 . + . ID=gene-C5O68_06520;Name=C5O68_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06520 PTQV01000037.1 Protein Homology CDS 27806 28000 . + 0 ID=cds-RJP81797.1;Parent=gene-C5O68_06520;Dbxref=NCBI_GP:RJP81797.1;Name=RJP81797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973621.1;locus_tag=C5O68_06520;product=hypothetical protein;protein_id=RJP81797.1;transl_table=11 PTQV01000037.1 Genbank gene 28189 28638 . - . ID=gene-C5O68_06525;Name=C5O68_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06525 PTQV01000037.1 Protein Homology CDS 28189 28638 . - 0 ID=cds-RJP81798.1;Parent=gene-C5O68_06525;Dbxref=NCBI_GP:RJP81798.1;Name=RJP81798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058907.1;locus_tag=C5O68_06525;product=hypothetical protein;protein_id=RJP81798.1;transl_table=11 PTQV01000037.1 Genbank gene 28697 28882 . + . ID=gene-C5O68_06530;Name=C5O68_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06530 PTQV01000037.1 Protein Homology CDS 28697 28882 . + 0 ID=cds-RJP81799.1;Parent=gene-C5O68_06530;Dbxref=NCBI_GP:RJP81799.1;Name=RJP81799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247546.1;locus_tag=C5O68_06530;product=hypothetical protein;protein_id=RJP81799.1;transl_table=11 PTQV01000037.1 Genbank gene 29054 29524 . - . ID=gene-C5O68_06535;Name=C5O68_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06535 PTQV01000037.1 Protein Homology CDS 29054 29524 . - 0 ID=cds-RJP81800.1;Parent=gene-C5O68_06535;Dbxref=NCBI_GP:RJP81800.1;Name=RJP81800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006149663.1;locus_tag=C5O68_06535;product=hypothetical protein;protein_id=RJP81800.1;transl_table=11 PTQV01000037.1 Genbank gene 29671 29856 . + . ID=gene-C5O68_06540;Name=C5O68_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06540 PTQV01000037.1 Protein Homology CDS 29671 29856 . + 0 ID=cds-RJP81801.1;Parent=gene-C5O68_06540;Dbxref=NCBI_GP:RJP81801.1;Name=RJP81801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008089317.1;locus_tag=C5O68_06540;product=XRE family transcriptional regulator;protein_id=RJP81801.1;transl_table=11 PTQV01000037.1 Genbank gene 29869 30057 . + . ID=gene-C5O68_06545;Name=C5O68_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06545 PTQV01000037.1 Protein Homology CDS 29869 30057 . + 0 ID=cds-RJP81802.1;Parent=gene-C5O68_06545;Dbxref=NCBI_GP:RJP81802.1;Name=RJP81802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001161207.1;locus_tag=C5O68_06545;product=XRE family transcriptional regulator;protein_id=RJP81802.1;transl_table=11 PTQV01000037.1 Genbank gene 30132 30329 . + . ID=gene-C5O68_06550;Name=C5O68_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06550 PTQV01000037.1 Protein Homology CDS 30132 30329 . + 0 ID=cds-RJP81803.1;Parent=gene-C5O68_06550;Dbxref=NCBI_GP:RJP81803.1;Name=RJP81803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066214.1;locus_tag=C5O68_06550;product=hypothetical protein;protein_id=RJP81803.1;transl_table=11 PTQV01000037.1 Genbank gene 30340 30537 . + . ID=gene-C5O68_06555;Name=C5O68_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06555 PTQV01000037.1 Protein Homology CDS 30340 30537 . + 0 ID=cds-RJP81804.1;Parent=gene-C5O68_06555;Dbxref=NCBI_GP:RJP81804.1;Name=RJP81804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427885.1;locus_tag=C5O68_06555;product=hypothetical protein;protein_id=RJP81804.1;transl_table=11 PTQV01000037.1 Genbank gene 30836 31366 . - . ID=gene-C5O68_06560;Name=C5O68_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06560 PTQV01000037.1 Protein Homology CDS 30836 31366 . - 0 ID=cds-RJP81805.1;Parent=gene-C5O68_06560;Dbxref=NCBI_GP:RJP81805.1;Name=RJP81805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135684.1;locus_tag=C5O68_06560;product=hypothetical protein;protein_id=RJP81805.1;transl_table=11 PTQV01000037.1 Genbank gene 31622 31882 . + . ID=gene-C5O68_06565;Name=C5O68_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06565 PTQV01000037.1 Protein Homology CDS 31622 31882 . + 0 ID=cds-RJP81806.1;Parent=gene-C5O68_06565;Dbxref=NCBI_GP:RJP81806.1;Name=RJP81806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097022.1;locus_tag=C5O68_06565;product=hypothetical protein;protein_id=RJP81806.1;transl_table=11 PTQV01000037.1 Genbank gene 31929 32639 . + . ID=gene-C5O68_06570;Name=C5O68_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06570 PTQV01000037.1 Protein Homology CDS 31929 32639 . + 0 ID=cds-RJP81807.1;Parent=gene-C5O68_06570;Dbxref=NCBI_GP:RJP81807.1;Name=RJP81807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002355.1;locus_tag=C5O68_06570;product=hypothetical protein;protein_id=RJP81807.1;transl_table=11 PTQV01000037.1 Genbank gene 33064 33354 . + . ID=gene-C5O68_06575;Name=C5O68_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06575 PTQV01000037.1 Protein Homology CDS 33064 33354 . + 0 ID=cds-RJP81808.1;Parent=gene-C5O68_06575;Dbxref=NCBI_GP:RJP81808.1;Name=RJP81808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000398534.1;locus_tag=C5O68_06575;product=hypothetical protein;protein_id=RJP81808.1;transl_table=11 PTQV01000037.1 Genbank gene 33367 33687 . + . ID=gene-C5O68_06580;Name=C5O68_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06580 PTQV01000037.1 Protein Homology CDS 33367 33687 . + 0 ID=cds-RJP81809.1;Parent=gene-C5O68_06580;Dbxref=NCBI_GP:RJP81809.1;Name=RJP81809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000462832.1;locus_tag=C5O68_06580;product=hypothetical protein;protein_id=RJP81809.1;transl_table=11 PTQV01000037.1 Genbank gene 33703 33999 . + . ID=gene-C5O68_06585;Name=C5O68_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06585 PTQV01000037.1 Protein Homology CDS 33703 33999 . + 0 ID=cds-RJP81810.1;Parent=gene-C5O68_06585;Dbxref=NCBI_GP:RJP81810.1;Name=RJP81810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001156935.1;locus_tag=C5O68_06585;product=hypothetical protein;protein_id=RJP81810.1;transl_table=11 PTQV01000037.1 Genbank gene 33992 34789 . + . ID=gene-C5O68_06590;Name=C5O68_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06590 PTQV01000037.1 Protein Homology CDS 33992 34789 . + 0 ID=cds-RJP81811.1;Parent=gene-C5O68_06590;Dbxref=NCBI_GP:RJP81811.1;Name=RJP81811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289771.1;locus_tag=C5O68_06590;product=DnaD domain protein;protein_id=RJP81811.1;transl_table=11 PTQV01000037.1 Genbank gene 34929 35699 . + . ID=gene-C5O68_06595;Name=C5O68_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06595 PTQV01000037.1 Protein Homology CDS 34929 35699 . + 0 ID=cds-RJP81812.1;Parent=gene-C5O68_06595;Dbxref=NCBI_GP:RJP81812.1;Name=RJP81812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228202.1;locus_tag=C5O68_06595;product=DNA replication protein DnaC;protein_id=RJP81812.1;transl_table=11 PTQV01000037.1 Genbank gene 35714 35908 . + . ID=gene-C5O68_06600;Name=C5O68_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06600 PTQV01000037.1 Protein Homology CDS 35714 35908 . + 0 ID=cds-RJP81813.1;Parent=gene-C5O68_06600;Dbxref=NCBI_GP:RJP81813.1;Name=RJP81813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470305.1;locus_tag=C5O68_06600;product=hypothetical protein;protein_id=RJP81813.1;transl_table=11 PTQV01000037.1 Genbank gene 35908 36135 . + . ID=gene-C5O68_06605;Name=C5O68_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06605 PTQV01000037.1 Protein Homology CDS 35908 36135 . + 0 ID=cds-RJP81814.1;Parent=gene-C5O68_06605;Dbxref=NCBI_GP:RJP81814.1;Name=RJP81814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891963.1;locus_tag=C5O68_06605;product=hypothetical protein;protein_id=RJP81814.1;transl_table=11 PTQV01000037.1 Genbank gene 36222 36617 . + . ID=gene-C5O68_06610;Name=C5O68_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06610 PTQV01000037.1 Protein Homology CDS 36222 36617 . + 0 ID=cds-RJP81815.1;Parent=gene-C5O68_06610;Dbxref=NCBI_GP:RJP81815.1;Name=RJP81815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609556.1;locus_tag=C5O68_06610;product=single-stranded DNA-binding protein;protein_id=RJP81815.1;transl_table=11 PTQV01000037.1 Genbank gene 36633 36800 . + . ID=gene-C5O68_06615;Name=C5O68_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06615 PTQV01000037.1 Protein Homology CDS 36633 36800 . + 0 ID=cds-RJP81816.1;Parent=gene-C5O68_06615;Dbxref=NCBI_GP:RJP81816.1;Name=RJP81816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233204.1;locus_tag=C5O68_06615;product=hypothetical protein;protein_id=RJP81816.1;transl_table=11 PTQV01000037.1 Genbank gene 36787 36975 . + . ID=gene-C5O68_06620;Name=C5O68_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06620 PTQV01000037.1 Protein Homology CDS 36787 36975 . + 0 ID=cds-RJP81817.1;Parent=gene-C5O68_06620;Dbxref=NCBI_GP:RJP81817.1;Name=RJP81817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105096.1;locus_tag=C5O68_06620;product=hypothetical protein;protein_id=RJP81817.1;transl_table=11 PTQV01000037.1 Genbank gene 36968 37459 . + . ID=gene-C5O68_06625;Name=C5O68_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06625 PTQV01000037.1 Protein Homology CDS 36968 37459 . + 0 ID=cds-RJP81818.1;Parent=gene-C5O68_06625;Dbxref=NCBI_GP:RJP81818.1;Name=RJP81818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021764.1;locus_tag=C5O68_06625;product=hypothetical protein;protein_id=RJP81818.1;transl_table=11 PTQV01000037.1 Genbank gene 37459 37746 . + . ID=gene-C5O68_06630;Name=C5O68_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06630 PTQV01000037.1 Protein Homology CDS 37459 37746 . + 0 ID=cds-RJP81819.1;Parent=gene-C5O68_06630;Dbxref=NCBI_GP:RJP81819.1;Name=RJP81819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000194857.1;locus_tag=C5O68_06630;product=hypothetical protein;protein_id=RJP81819.1;transl_table=11 PTQV01000037.1 Genbank gene 37746 38222 . + . ID=gene-C5O68_06635;Name=C5O68_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06635 PTQV01000037.1 Protein Homology CDS 37746 38222 . + 0 ID=cds-RJP81820.1;Parent=gene-C5O68_06635;Dbxref=NCBI_GP:RJP81820.1;Name=RJP81820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502465.1;locus_tag=C5O68_06635;product=class I SAM-dependent methyltransferase;protein_id=RJP81820.1;transl_table=11 PTQV01000037.1 Genbank gene 38219 38479 . + . ID=gene-C5O68_06640;Name=C5O68_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06640 PTQV01000037.1 Protein Homology CDS 38219 38479 . + 0 ID=cds-RJP81821.1;Parent=gene-C5O68_06640;Dbxref=NCBI_GP:RJP81821.1;Name=RJP81821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445573.1;locus_tag=C5O68_06640;product=hypothetical protein;protein_id=RJP81821.1;transl_table=11 PTQV01000037.1 Genbank gene 38476 38898 . + . ID=gene-C5O68_06645;Name=C5O68_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06645 PTQV01000037.1 Protein Homology CDS 38476 38898 . + 0 ID=cds-RJP81822.1;Parent=gene-C5O68_06645;Dbxref=NCBI_GP:RJP81822.1;Name=RJP81822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140868.1;locus_tag=C5O68_06645;product=hypothetical protein;protein_id=RJP81822.1;transl_table=11 PTQV01000037.1 Genbank gene 38910 39332 . + . ID=gene-C5O68_06650;Name=C5O68_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06650 PTQV01000037.1 Protein Homology CDS 38910 39332 . + 0 ID=cds-RJP81823.1;Parent=gene-C5O68_06650;Dbxref=NCBI_GP:RJP81823.1;Name=RJP81823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612397.1;locus_tag=C5O68_06650;product=hypothetical protein;protein_id=RJP81823.1;transl_table=11 PTQV01000037.1 Genbank gene 39455 40015 . + . ID=gene-C5O68_06655;Name=C5O68_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06655 PTQV01000037.1 Protein Homology CDS 39455 40015 . + 0 ID=cds-RJP81824.1;Parent=gene-C5O68_06655;Dbxref=NCBI_GP:RJP81824.1;Name=RJP81824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973644.1;locus_tag=C5O68_06655;product=Lrp/AsnC family transcriptional regulator;protein_id=RJP81824.1;transl_table=11 PTQV01000037.1 Genbank pseudogene 40017 40243 . + . ID=gene-C5O68_06660;Name=C5O68_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06660;pseudo=true PTQV01000037.1 Protein Homology CDS 40017 40243 . + 0 ID=cds-C5O68_06660;Parent=gene-C5O68_06660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973645.1;locus_tag=C5O68_06660;product=DUF3310 domain-containing protein;pseudo=true;transl_table=11 PTQV01000037.1 Genbank pseudogene 40236 40425 . + . ID=gene-C5O68_06665;Name=C5O68_06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06665;pseudo=true PTQV01000037.1 Protein Homology CDS 40236 40425 . + 0 ID=cds-C5O68_06665;Parent=gene-C5O68_06665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007110.1;locus_tag=C5O68_06665;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000037.1 Genbank gene 40415 40645 . + . ID=gene-C5O68_06670;Name=C5O68_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06670 PTQV01000037.1 Protein Homology CDS 40415 40645 . + 0 ID=cds-RJP81825.1;Parent=gene-C5O68_06670;Dbxref=NCBI_GP:RJP81825.1;Name=RJP81825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998323.1;locus_tag=C5O68_06670;product=XRE family transcriptional regulator;protein_id=RJP81825.1;transl_table=11 PTQV01000037.1 Genbank pseudogene 40716 40847 . + . ID=gene-C5O68_06675;Name=C5O68_06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06675;pseudo=true PTQV01000037.1 Protein Homology CDS 40716 40847 . + 0 ID=cds-C5O68_06675;Parent=gene-C5O68_06675;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001165370.1;locus_tag=C5O68_06675;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region PTQV01000038.1 1 16923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000038.1 Genbank region 1 16923 . + . ID=PTQV01000038.1:1..16923;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000038.1 Genbank gene 1 982 . - . ID=gene-C5O68_06680;Name=C5O68_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06680;partial=true;start_range=.,1 PTQV01000038.1 Protein Homology CDS 1 982 . - 0 ID=cds-RJP81701.1;Parent=gene-C5O68_06680;Dbxref=NCBI_GP:RJP81701.1;Name=RJP81701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240828.1;locus_tag=C5O68_06680;partial=true;product=hypothetical protein;protein_id=RJP81701.1;start_range=.,1;transl_table=11 PTQV01000038.1 Genbank pseudogene 1174 1374 . - . ID=gene-C5O68_06685;Name=C5O68_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06685;pseudo=true PTQV01000038.1 Protein Homology CDS 1174 1374 . - 0 ID=cds-C5O68_06685;Parent=gene-C5O68_06685;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000908254.1;locus_tag=C5O68_06685;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000038.1 Genbank gene 1361 2110 . - . ID=gene-C5O68_06690;Name=C5O68_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06690 PTQV01000038.1 Protein Homology CDS 1361 2110 . - 0 ID=cds-RJP81702.1;Parent=gene-C5O68_06690;Dbxref=NCBI_GP:RJP81702.1;Name=RJP81702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07501.10;locus_tag=C5O68_06690;product=hypothetical protein;protein_id=RJP81702.1;transl_table=11 PTQV01000038.1 Genbank gene 2260 2811 . - . ID=gene-C5O68_06695;Name=C5O68_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06695 PTQV01000038.1 Protein Homology CDS 2260 2811 . - 0 ID=cds-RJP81703.1;Parent=gene-C5O68_06695;Dbxref=NCBI_GP:RJP81703.1;Name=RJP81703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358868.1;locus_tag=C5O68_06695;product=N-acetyltransferase;protein_id=RJP81703.1;transl_table=11 PTQV01000038.1 Genbank gene 2918 3742 . - . ID=gene-C5O68_06700;Name=C5O68_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06700 PTQV01000038.1 Protein Homology CDS 2918 3742 . - 0 ID=cds-RJP81704.1;Parent=gene-C5O68_06700;Dbxref=NCBI_GP:RJP81704.1;Name=RJP81704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446593.1;locus_tag=C5O68_06700;product=NAD(+) synthase;protein_id=RJP81704.1;transl_table=11 PTQV01000038.1 Genbank gene 3739 5199 . - . ID=gene-C5O68_06705;Name=C5O68_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06705 PTQV01000038.1 Protein Homology CDS 3739 5199 . - 0 ID=cds-RJP81705.1;Parent=gene-C5O68_06705;Dbxref=NCBI_GP:RJP81705.1;Name=RJP81705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358870.1;locus_tag=C5O68_06705;product=nicotinate phosphoribosyltransferase;protein_id=RJP81705.1;transl_table=11 PTQV01000038.1 Genbank gene 5315 5803 . - . ID=gene-C5O68_06710;Name=C5O68_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06710 PTQV01000038.1 Protein Homology CDS 5315 5803 . - 0 ID=cds-RJP81706.1;Parent=gene-C5O68_06710;Dbxref=NCBI_GP:RJP81706.1;Name=RJP81706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358871.1;locus_tag=C5O68_06710;product=hypothetical protein;protein_id=RJP81706.1;transl_table=11 PTQV01000038.1 Genbank gene 5793 6032 . - . ID=gene-C5O68_06715;Name=C5O68_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06715 PTQV01000038.1 Protein Homology CDS 5793 6032 . - 0 ID=cds-RJP81707.1;Parent=gene-C5O68_06715;Dbxref=NCBI_GP:RJP81707.1;Name=RJP81707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358872.1;locus_tag=C5O68_06715;product=transcriptional regulator;protein_id=RJP81707.1;transl_table=11 PTQV01000038.1 Genbank gene 6388 7116 . - . ID=gene-C5O68_06720;Name=C5O68_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06720 PTQV01000038.1 Protein Homology CDS 6388 7116 . - 0 ID=cds-RJP81708.1;Parent=gene-C5O68_06720;Dbxref=NCBI_GP:RJP81708.1;Name=RJP81708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358873.1;locus_tag=C5O68_06720;product=hypothetical protein;protein_id=RJP81708.1;transl_table=11 PTQV01000038.1 Genbank gene 7132 7977 . - . ID=gene-C5O68_06725;Name=C5O68_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06725 PTQV01000038.1 Protein Homology CDS 7132 7977 . - 0 ID=cds-RJP81709.1;Parent=gene-C5O68_06725;Dbxref=NCBI_GP:RJP81709.1;Name=RJP81709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000452046.1;locus_tag=C5O68_06725;product=ABC transporter ATP-binding protein;protein_id=RJP81709.1;transl_table=11 PTQV01000038.1 Genbank pseudogene 8362 8547 . - . ID=gene-C5O68_06730;Name=C5O68_06730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06730;pseudo=true PTQV01000038.1 Protein Homology CDS 8362 8547 . - 0 ID=cds-C5O68_06730;Parent=gene-C5O68_06730;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446424.1;locus_tag=C5O68_06730;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000038.1 Genbank pseudogene 8571 9601 . + . ID=gene-C5O68_06735;Name=C5O68_06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06735;pseudo=true PTQV01000038.1 Protein Homology CDS 8571 9601 . + 0 ID=cds-C5O68_06735;Parent=gene-C5O68_06735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017292.1;locus_tag=C5O68_06735;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 PTQV01000038.1 Genbank gene 9758 10297 . - . ID=gene-C5O68_06740;Name=C5O68_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06740 PTQV01000038.1 Protein Homology CDS 9758 10297 . - 0 ID=cds-RJP81710.1;Parent=gene-C5O68_06740;Dbxref=NCBI_GP:RJP81710.1;Name=RJP81710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260750.1;locus_tag=C5O68_06740;product=DNA-binding protein;protein_id=RJP81710.1;transl_table=11 PTQV01000038.1 Genbank gene 10540 11007 . + . ID=gene-C5O68_06745;Name=C5O68_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06745 PTQV01000038.1 Protein Homology CDS 10540 11007 . + 0 ID=cds-RJP81711.1;Parent=gene-C5O68_06745;Dbxref=NCBI_GP:RJP81711.1;Name=RJP81711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323524.1;locus_tag=C5O68_06745;product=hypothetical protein;protein_id=RJP81711.1;transl_table=11 PTQV01000038.1 Genbank gene 11026 11439 . + . ID=gene-C5O68_06750;Name=C5O68_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06750 PTQV01000038.1 Protein Homology CDS 11026 11439 . + 0 ID=cds-RJP81712.1;Parent=gene-C5O68_06750;Dbxref=NCBI_GP:RJP81712.1;Name=RJP81712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258404.1;locus_tag=C5O68_06750;product=hypothetical protein;protein_id=RJP81712.1;transl_table=11 PTQV01000038.1 Genbank gene 11958 13265 . + . ID=gene-C5O68_06755;Name=C5O68_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06755 PTQV01000038.1 Protein Homology CDS 11958 13265 . + 0 ID=cds-RJP81713.1;Parent=gene-C5O68_06755;Dbxref=NCBI_GP:RJP81713.1;Name=RJP81713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000198400.1;locus_tag=C5O68_06755;product=plasmid replication protein;protein_id=RJP81713.1;transl_table=11 PTQV01000038.1 Genbank gene 13483 13701 . + . ID=gene-C5O68_06760;Name=C5O68_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06760 PTQV01000038.1 Protein Homology CDS 13483 13701 . + 0 ID=cds-RJP81714.1;Parent=gene-C5O68_06760;Dbxref=NCBI_GP:RJP81714.1;Name=RJP81714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000498423.1;locus_tag=C5O68_06760;product=DUF3173 domain-containing protein;protein_id=RJP81714.1;transl_table=11 PTQV01000038.1 Genbank gene 13694 14884 . + . ID=gene-C5O68_06765;Name=C5O68_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06765 PTQV01000038.1 Protein Homology CDS 13694 14884 . + 0 ID=cds-RJP81715.1;Parent=gene-C5O68_06765;Dbxref=NCBI_GP:RJP81715.1;Name=RJP81715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260738.1;locus_tag=C5O68_06765;product=site-specific integrase;protein_id=RJP81715.1;transl_table=11 PTQV01000038.1 Genbank gene 15237 16799 . - . ID=gene-C5O68_06770;Name=C5O68_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06770 PTQV01000038.1 Protein Homology CDS 15237 16799 . - 0 ID=cds-RJP81716.1;Parent=gene-C5O68_06770;Dbxref=NCBI_GP:RJP81716.1;Name=RJP81716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358893.1;locus_tag=C5O68_06770;product=GMP synthase (glutamine-hydrolyzing);protein_id=RJP81716.1;transl_table=11 ##sequence-region PTQV01000039.1 1 121528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000039.1 Genbank region 1 121528 . + . ID=PTQV01000039.1:1..121528;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000039.1 Genbank pseudogene 234 1018 . - . ID=gene-C5O68_06775;Name=C5O68_06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06775;pseudo=true PTQV01000039.1 Protein Homology CDS 234 1018 . - 0 ID=cds-C5O68_06775;Parent=gene-C5O68_06775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001810082.1;locus_tag=C5O68_06775;product=type I restriction endonuclease subunit S;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 1018 2481 . - . ID=gene-C5O68_06780;Name=C5O68_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06780 PTQV01000039.1 Protein Homology CDS 1018 2481 . - 0 ID=cds-RJP81474.1;Parent=gene-C5O68_06780;Dbxref=NCBI_GP:RJP81474.1;Name=RJP81474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358043.1;locus_tag=C5O68_06780;product=SAM-dependent DNA methyltransferase;protein_id=RJP81474.1;transl_table=11 PTQV01000039.1 Genbank gene 2494 4827 . - . ID=gene-C5O68_06785;Name=C5O68_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06785 PTQV01000039.1 Protein Homology CDS 2494 4827 . - 0 ID=cds-RJP81475.1;Parent=gene-C5O68_06785;Dbxref=NCBI_GP:RJP81475.1;Name=RJP81475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358044.1;locus_tag=C5O68_06785;product=restriction endonuclease subunit R;protein_id=RJP81475.1;transl_table=11 PTQV01000039.1 Genbank gene 5205 5399 . + . ID=gene-C5O68_06790;Name=C5O68_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06790 PTQV01000039.1 Protein Homology CDS 5205 5399 . + 0 ID=cds-RJP81476.1;Parent=gene-C5O68_06790;Dbxref=NCBI_GP:RJP81476.1;Name=RJP81476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358045.1;locus_tag=C5O68_06790;product=hypothetical protein;protein_id=RJP81476.1;transl_table=11 PTQV01000039.1 Genbank gene 5434 5946 . + . ID=gene-C5O68_06795;Name=C5O68_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06795 PTQV01000039.1 Protein Homology CDS 5434 5946 . + 0 ID=cds-RJP81477.1;Parent=gene-C5O68_06795;Dbxref=NCBI_GP:RJP81477.1;Name=RJP81477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001088710.1;locus_tag=C5O68_06795;product=DUF2812 domain-containing protein;protein_id=RJP81477.1;transl_table=11 PTQV01000039.1 Genbank gene 6107 7141 . + . ID=gene-C5O68_06800;Name=C5O68_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06800 PTQV01000039.1 Protein Homology CDS 6107 7141 . + 0 ID=cds-RJP81478.1;Parent=gene-C5O68_06800;Dbxref=NCBI_GP:RJP81478.1;Name=RJP81478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445492.1;locus_tag=C5O68_06800;product=heat-inducible transcriptional repressor HrcA;protein_id=RJP81478.1;transl_table=11 PTQV01000039.1 Genbank gene 7168 7692 . + . ID=gene-C5O68_06805;Name=C5O68_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06805 PTQV01000039.1 Protein Homology CDS 7168 7692 . + 0 ID=cds-RJP81479.1;Parent=gene-C5O68_06805;Dbxref=NCBI_GP:RJP81479.1;Name=RJP81479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445493.1;locus_tag=C5O68_06805;product=nucleotide exchange factor GrpE;protein_id=RJP81479.1;transl_table=11 PTQV01000039.1 Genbank gene 8169 9992 . + . ID=gene-C5O68_06810;Name=C5O68_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06810 PTQV01000039.1 Protein Homology CDS 8169 9992 . + 0 ID=cds-RJP81480.1;Parent=gene-C5O68_06810;Dbxref=NCBI_GP:RJP81480.1;Name=RJP81480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946936.1;locus_tag=C5O68_06810;product=molecular chaperone DnaK;protein_id=RJP81480.1;transl_table=11 PTQV01000039.1 Genbank gene 9994 10395 . + . ID=gene-C5O68_06815;Name=C5O68_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06815 PTQV01000039.1 Protein Homology CDS 9994 10395 . + 0 ID=cds-RJP81481.1;Parent=gene-C5O68_06815;Dbxref=NCBI_GP:RJP81481.1;Name=RJP81481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114360.1;locus_tag=C5O68_06815;product=tRNA (guanine-N7)-methyltransferase;protein_id=RJP81481.1;transl_table=11 PTQV01000039.1 Genbank gene 10612 11751 . + . ID=gene-C5O68_06820;Name=C5O68_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06820 PTQV01000039.1 Protein Homology CDS 10612 11751 . + 0 ID=cds-RJP81482.1;Parent=gene-C5O68_06820;Dbxref=NCBI_GP:RJP81482.1;Name=RJP81482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445497.1;locus_tag=C5O68_06820;product=molecular chaperone DnaJ;protein_id=RJP81482.1;transl_table=11 PTQV01000039.1 Genbank gene 12030 12317 . - . ID=gene-C5O68_06825;Name=C5O68_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06825 PTQV01000039.1 Protein Homology CDS 12030 12317 . - 0 ID=cds-RJP81483.1;Parent=gene-C5O68_06825;Dbxref=NCBI_GP:RJP81483.1;Name=RJP81483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445499.1;locus_tag=C5O68_06825;product=hypothetical protein;protein_id=RJP81483.1;transl_table=11 PTQV01000039.1 Genbank gene 12327 12737 . - . ID=gene-C5O68_06830;Name=C5O68_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06830 PTQV01000039.1 Protein Homology CDS 12327 12737 . - 0 ID=cds-RJP81484.1;Parent=gene-C5O68_06830;Dbxref=NCBI_GP:RJP81484.1;Name=RJP81484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445500.1;locus_tag=C5O68_06830;product=HIT family protein;protein_id=RJP81484.1;transl_table=11 PTQV01000039.1 Genbank gene 12805 13536 . + . ID=gene-C5O68_06835;Name=C5O68_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06835 PTQV01000039.1 Protein Homology CDS 12805 13536 . + 0 ID=cds-RJP81485.1;Parent=gene-C5O68_06835;Dbxref=NCBI_GP:RJP81485.1;Name=RJP81485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445501.1;locus_tag=C5O68_06835;product=multidrug ABC transporter ATP-binding protein;protein_id=RJP81485.1;transl_table=11 PTQV01000039.1 Genbank gene 13533 14582 . + . ID=gene-C5O68_06840;Name=C5O68_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06840 PTQV01000039.1 Protein Homology CDS 13533 14582 . + 0 ID=cds-RJP81486.1;Parent=gene-C5O68_06840;Dbxref=NCBI_GP:RJP81486.1;Name=RJP81486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358054.1;locus_tag=C5O68_06840;product=multidrug ABC transporter permease;protein_id=RJP81486.1;transl_table=11 PTQV01000039.1 Genbank gene 14644 14967 . - . ID=gene-C5O68_06845;Name=C5O68_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06845 PTQV01000039.1 Protein Homology CDS 14644 14967 . - 0 ID=cds-RJP81487.1;Parent=gene-C5O68_06845;Dbxref=NCBI_GP:RJP81487.1;Name=RJP81487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399208.1;locus_tag=C5O68_06845;product=helicase BlpT;protein_id=RJP81487.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 14996 15247 . - . ID=gene-C5O68_06850;Name=C5O68_06850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06850;pseudo=true PTQV01000039.1 Protein Homology CDS 14996 15247 . - 0 ID=cds-C5O68_06850;Parent=gene-C5O68_06850;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130045.1;locus_tag=C5O68_06850;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 15606 15944 . + . ID=gene-C5O68_06855;Name=C5O68_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06855 PTQV01000039.1 Protein Homology CDS 15606 15944 . + 0 ID=cds-RJP81488.1;Parent=gene-C5O68_06855;Dbxref=NCBI_GP:RJP81488.1;Name=RJP81488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445504.1;locus_tag=C5O68_06855;product=LytR family transcriptional regulator;protein_id=RJP81488.1;transl_table=11 PTQV01000039.1 Genbank gene 15949 16686 . + . ID=gene-C5O68_06860;Name=C5O68_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06860 PTQV01000039.1 Protein Homology CDS 15949 16686 . + 0 ID=cds-RJP81489.1;Parent=gene-C5O68_06860;Dbxref=NCBI_GP:RJP81489.1;Name=RJP81489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358057.1;locus_tag=C5O68_06860;product=DNA-binding response regulator;protein_id=RJP81489.1;transl_table=11 PTQV01000039.1 Genbank gene 16700 18040 . + . ID=gene-C5O68_06865;Name=C5O68_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06865 PTQV01000039.1 Protein Homology CDS 16700 18040 . + 0 ID=cds-RJP81490.1;Parent=gene-C5O68_06865;Dbxref=NCBI_GP:RJP81490.1;Name=RJP81490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358058.1;locus_tag=C5O68_06865;product=ATP-binding protein;protein_id=RJP81490.1;transl_table=11 PTQV01000039.1 Genbank gene 18083 18238 . - . ID=gene-C5O68_06870;Name=blpC;gbkey=Gene;gene=blpC;gene_biotype=protein_coding;locus_tag=C5O68_06870 PTQV01000039.1 Protein Homology CDS 18083 18238 . - 0 ID=cds-RJP81491.1;Parent=gene-C5O68_06870;Dbxref=NCBI_GP:RJP81491.1;Name=RJP81491.1;gbkey=CDS;gene=blpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000360258.1;locus_tag=C5O68_06870;product=quorum-sensing system pheromone BlpC;protein_id=RJP81491.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 18295 19657 . - . ID=gene-C5O68_06875;Name=C5O68_06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06875;pseudo=true PTQV01000039.1 Protein Homology CDS 18295 19657 . - 0 ID=cds-C5O68_06875;Parent=gene-C5O68_06875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069090.1;locus_tag=C5O68_06875;product=bacteriocin ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank pseudogene 19668 21825 . - . ID=gene-C5O68_06880;Name=C5O68_06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06880;pseudo=true PTQV01000039.1 Protein Homology CDS 19668 21825 . - 0 ID=cds-C5O68_06880;Parent=gene-C5O68_06880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012677515.1;locus_tag=C5O68_06880;product=peptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 22122 22352 . + . ID=gene-C5O68_06885;Name=C5O68_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06885 PTQV01000039.1 Protein Homology CDS 22122 22352 . + 0 ID=cds-RJP81492.1;Parent=gene-C5O68_06885;Dbxref=NCBI_GP:RJP81492.1;Name=RJP81492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093252.1;locus_tag=C5O68_06885;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=RJP81492.1;transl_table=11 PTQV01000039.1 Genbank gene 22404 22583 . + . ID=gene-C5O68_06890;Name=C5O68_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06890 PTQV01000039.1 Protein Homology CDS 22404 22583 . + 0 ID=cds-RJP81493.1;Parent=gene-C5O68_06890;Dbxref=NCBI_GP:RJP81493.1;Name=RJP81493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358412.1;locus_tag=C5O68_06890;product=hypothetical protein;protein_id=RJP81493.1;transl_table=11 PTQV01000039.1 Genbank gene 22588 22773 . + . ID=gene-C5O68_06895;Name=C5O68_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06895 PTQV01000039.1 Protein Homology CDS 22588 22773 . + 0 ID=cds-RJP81494.1;Parent=gene-C5O68_06895;Dbxref=NCBI_GP:RJP81494.1;Name=RJP81494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820934.1;locus_tag=C5O68_06895;product=hypothetical protein;protein_id=RJP81494.1;transl_table=11 PTQV01000039.1 Genbank gene 22939 23997 . + . ID=gene-C5O68_06900;Name=C5O68_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06900 PTQV01000039.1 Protein Homology CDS 22939 23997 . + 0 ID=cds-RJP81495.1;Parent=gene-C5O68_06900;Dbxref=NCBI_GP:RJP81495.1;Name=RJP81495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000795768.1;locus_tag=C5O68_06900;product=transposase;protein_id=RJP81495.1;transl_table=11 PTQV01000039.1 Genbank gene 24167 24445 . + . ID=gene-C5O68_06905;Name=C5O68_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06905 PTQV01000039.1 Protein Homology CDS 24167 24445 . + 0 ID=cds-RJP81496.1;Parent=gene-C5O68_06905;Dbxref=NCBI_GP:RJP81496.1;Name=RJP81496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042208.1;locus_tag=C5O68_06905;product=hypothetical protein;protein_id=RJP81496.1;transl_table=11 PTQV01000039.1 Genbank gene 24784 25140 . + . ID=gene-C5O68_06910;Name=C5O68_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06910 PTQV01000039.1 Protein Homology CDS 24784 25140 . + 0 ID=cds-RJP81497.1;Parent=gene-C5O68_06910;Dbxref=NCBI_GP:RJP81497.1;Name=RJP81497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445507.1;locus_tag=C5O68_06910;product=hypothetical protein;protein_id=RJP81497.1;transl_table=11 PTQV01000039.1 Genbank gene 25352 25585 . + . ID=gene-C5O68_06915;Name=C5O68_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06915 PTQV01000039.1 Protein Homology CDS 25352 25585 . + 0 ID=cds-RJP81581.1;Parent=gene-C5O68_06915;Dbxref=NCBI_GP:RJP81581.1;Name=RJP81581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358064.1;locus_tag=C5O68_06915;product=ComC/BlpC family peptide pheromone/bacteriocin;protein_id=RJP81581.1;transl_table=11 PTQV01000039.1 Genbank gene 25617 26306 . + . ID=gene-C5O68_06920;Name=C5O68_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06920 PTQV01000039.1 Protein Homology CDS 25617 26306 . + 0 ID=cds-RJP81498.1;Parent=gene-C5O68_06920;Dbxref=NCBI_GP:RJP81498.1;Name=RJP81498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358066.1;locus_tag=C5O68_06920;product=CPBP family intramembrane metalloprotease;protein_id=RJP81498.1;transl_table=11 PTQV01000039.1 Genbank gene 26348 26596 . + . ID=gene-C5O68_06925;Name=C5O68_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06925 PTQV01000039.1 Protein Homology CDS 26348 26596 . + 0 ID=cds-RJP81499.1;Parent=gene-C5O68_06925;Dbxref=NCBI_GP:RJP81499.1;Name=RJP81499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399200.1;locus_tag=C5O68_06925;product=hypothetical protein;protein_id=RJP81499.1;transl_table=11 PTQV01000039.1 Genbank gene 26626 27237 . + . ID=gene-C5O68_06930;Name=C5O68_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06930 PTQV01000039.1 Protein Homology CDS 26626 27237 . + 0 ID=cds-RJP81500.1;Parent=gene-C5O68_06930;Dbxref=NCBI_GP:RJP81500.1;Name=RJP81500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358068.1;locus_tag=C5O68_06930;product=CPBP family intramembrane metalloprotease;protein_id=RJP81500.1;transl_table=11 PTQV01000039.1 Genbank gene 27399 28193 . + . ID=gene-C5O68_06935;Name=C5O68_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06935 PTQV01000039.1 Protein Homology CDS 27399 28193 . + 0 ID=cds-RJP81501.1;Parent=gene-C5O68_06935;Dbxref=NCBI_GP:RJP81501.1;Name=RJP81501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358069.1;locus_tag=C5O68_06935;product=aminoglycoside phosphotransferase;protein_id=RJP81501.1;transl_table=11 PTQV01000039.1 Genbank gene 28190 28825 . + . ID=gene-C5O68_06940;Name=C5O68_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06940 PTQV01000039.1 Protein Homology CDS 28190 28825 . + 0 ID=cds-RJP81502.1;Parent=gene-C5O68_06940;Dbxref=NCBI_GP:RJP81502.1;Name=RJP81502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358070.1;locus_tag=C5O68_06940;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=RJP81502.1;transl_table=11 PTQV01000039.1 Genbank gene 28952 29431 . + . ID=gene-C5O68_06945;Name=C5O68_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06945 PTQV01000039.1 Protein Homology CDS 28952 29431 . + 0 ID=cds-RJP81503.1;Parent=gene-C5O68_06945;Dbxref=NCBI_GP:RJP81503.1;Name=RJP81503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445515.1;locus_tag=C5O68_06945;product=ribosome maturation factor RimP;protein_id=RJP81503.1;transl_table=11 PTQV01000039.1 Genbank gene 29475 30611 . + . ID=gene-C5O68_06950;Name=C5O68_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06950 PTQV01000039.1 Protein Homology CDS 29475 30611 . + 0 ID=cds-RJP81504.1;Parent=gene-C5O68_06950;Dbxref=NCBI_GP:RJP81504.1;Name=RJP81504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445516.1;locus_tag=C5O68_06950;product=transcription termination/antitermination protein NusA;protein_id=RJP81504.1;transl_table=11 PTQV01000039.1 Genbank gene 30633 30926 . + . ID=gene-C5O68_06955;Name=C5O68_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06955 PTQV01000039.1 Protein Homology CDS 30633 30926 . + 0 ID=cds-RJP81505.1;Parent=gene-C5O68_06955;Dbxref=NCBI_GP:RJP81505.1;Name=RJP81505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358073.1;locus_tag=C5O68_06955;product=DUF448 domain-containing protein;protein_id=RJP81505.1;transl_table=11 PTQV01000039.1 Genbank gene 30919 31218 . + . ID=gene-C5O68_06960;Name=C5O68_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06960 PTQV01000039.1 Protein Homology CDS 30919 31218 . + 0 ID=cds-RJP81506.1;Parent=gene-C5O68_06960;Dbxref=NCBI_GP:RJP81506.1;Name=RJP81506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358074.1;locus_tag=C5O68_06960;product=hypothetical protein;protein_id=RJP81506.1;transl_table=11 PTQV01000039.1 Genbank gene 31235 34036 . + . ID=gene-C5O68_06965;Name=C5O68_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06965 PTQV01000039.1 Protein Homology CDS 31235 34036 . + 0 ID=cds-RJP81507.1;Parent=gene-C5O68_06965;Dbxref=NCBI_GP:RJP81507.1;Name=RJP81507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358075.1;locus_tag=C5O68_06965;product=translation initiation factor IF-2;protein_id=RJP81507.1;transl_table=11 PTQV01000039.1 Genbank gene 34287 34637 . + . ID=gene-C5O68_06970;Name=C5O68_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06970 PTQV01000039.1 Protein Homology CDS 34287 34637 . + 0 ID=cds-RJP81508.1;Parent=gene-C5O68_06970;Dbxref=NCBI_GP:RJP81508.1;Name=RJP81508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445520.1;locus_tag=C5O68_06970;product=30S ribosome-binding factor RbfA;protein_id=RJP81508.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 34745 34816 . - . ID=gene-C5O68_06975;Name=C5O68_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06975;pseudo=true PTQV01000039.1 Protein Homology CDS 34745 34816 . - 0 ID=cds-C5O68_06975;Parent=gene-C5O68_06975;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_06975;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000039.1 Genbank pseudogene 35373 36135 . + . ID=gene-C5O68_06980;Name=C5O68_06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06980;pseudo=true PTQV01000039.1 Protein Homology CDS 35373 36135 . + 0 ID=cds-C5O68_06980;Parent=gene-C5O68_06980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359257.1;locus_tag=C5O68_06980;product=restriction endonuclease;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 36344 36511 . + . ID=gene-C5O68_06985;Name=C5O68_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06985 PTQV01000039.1 Protein Homology CDS 36344 36511 . + 0 ID=cds-RJP81582.1;Parent=gene-C5O68_06985;Dbxref=NCBI_GP:RJP81582.1;Name=RJP81582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760983.1;locus_tag=C5O68_06985;product=protein dpnD;protein_id=RJP81582.1;transl_table=11 PTQV01000039.1 Genbank gene 36575 37840 . - . ID=gene-C5O68_06990;Name=C5O68_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_06990 PTQV01000039.1 Protein Homology CDS 36575 37840 . - 0 ID=cds-RJP81509.1;Parent=gene-C5O68_06990;Dbxref=NCBI_GP:RJP81509.1;Name=RJP81509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886006.1;locus_tag=C5O68_06990;product=DNA (cytosine-5-)-methyltransferase;protein_id=RJP81509.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 37957 39446 . + . ID=gene-C5O68_06995;Name=C5O68_06995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_06995;pseudo=true PTQV01000039.1 Protein Homology CDS 37957 39446 . + 0 ID=cds-C5O68_06995;Parent=gene-C5O68_06995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003712295.1;locus_tag=C5O68_06995;product=DNA mismatch repair protein MutH;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 39502 40764 . - . ID=gene-C5O68_07000;Name=C5O68_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07000 PTQV01000039.1 Protein Homology CDS 39502 40764 . - 0 ID=cds-RJP81510.1;Parent=gene-C5O68_07000;Dbxref=NCBI_GP:RJP81510.1;Name=RJP81510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445645.1;locus_tag=C5O68_07000;product=xanthine permease;protein_id=RJP81510.1;transl_table=11 PTQV01000039.1 Genbank gene 40764 41345 . - . ID=gene-C5O68_07005;Name=C5O68_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07005 PTQV01000039.1 Protein Homology CDS 40764 41345 . - 0 ID=cds-RJP81511.1;Parent=gene-C5O68_07005;Dbxref=NCBI_GP:RJP81511.1;Name=RJP81511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359254.1;locus_tag=C5O68_07005;product=xanthine phosphoribosyltransferase;protein_id=RJP81511.1;transl_table=11 PTQV01000039.1 cmsearch riboswitch 41475 41570 . - . ID=id-PTQV01000039.1:41475..41570;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000039.1 Genbank pseudogene 41737 41811 . - . ID=gene-C5O68_07010;Name=C5O68_07010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07010;pseudo=true PTQV01000039.1 Protein Homology CDS 41737 41811 . - 0 ID=cds-C5O68_07010;Parent=gene-C5O68_07010;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_07010;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 41910 42296 . - . ID=gene-C5O68_07015;Name=C5O68_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07015 PTQV01000039.1 Protein Homology CDS 41910 42296 . - 0 ID=cds-RJP81512.1;Parent=gene-C5O68_07015;Dbxref=NCBI_GP:RJP81512.1;Name=RJP81512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035640.1;locus_tag=C5O68_07015;product=VOC family protein;protein_id=RJP81512.1;transl_table=11 PTQV01000039.1 Genbank gene 42308 43135 . - . ID=gene-C5O68_07020;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=C5O68_07020 PTQV01000039.1 Protein Homology CDS 42308 43135 . - 0 ID=cds-RJP81513.1;Parent=gene-C5O68_07020;Dbxref=NCBI_GP:RJP81513.1;Name=RJP81513.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445648.1;locus_tag=C5O68_07020;product=exodeoxyribonuclease III;protein_id=RJP81513.1;transl_table=11 PTQV01000039.1 Genbank gene 43355 44254 . + . ID=gene-C5O68_07025;Name=C5O68_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07025 PTQV01000039.1 Protein Homology CDS 43355 44254 . + 0 ID=cds-RJP81514.1;Parent=gene-C5O68_07025;Dbxref=NCBI_GP:RJP81514.1;Name=RJP81514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445649.1;locus_tag=C5O68_07025;product=CPBP family intramembrane metalloprotease domain-containing protein;protein_id=RJP81514.1;transl_table=11 PTQV01000039.1 Genbank gene 44238 44525 . + . ID=gene-C5O68_07030;Name=C5O68_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07030 PTQV01000039.1 Protein Homology CDS 44238 44525 . + 0 ID=cds-RJP81515.1;Parent=gene-C5O68_07030;Dbxref=NCBI_GP:RJP81515.1;Name=RJP81515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445650.1;locus_tag=C5O68_07030;product=ArsR family transcriptional regulator;protein_id=RJP81515.1;transl_table=11 PTQV01000039.1 Genbank gene 44506 45147 . + . ID=gene-C5O68_07035;Name=C5O68_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07035 PTQV01000039.1 Protein Homology CDS 44506 45147 . + 0 ID=cds-RJP81516.1;Parent=gene-C5O68_07035;Dbxref=NCBI_GP:RJP81516.1;Name=RJP81516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445651.1;locus_tag=C5O68_07035;product=DUF1648 domain-containing protein;protein_id=RJP81516.1;transl_table=11 PTQV01000039.1 Genbank gene 45274 45411 . + . ID=gene-C5O68_07040;Name=C5O68_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07040 PTQV01000039.1 Protein Homology CDS 45274 45411 . + 0 ID=cds-RJP81517.1;Parent=gene-C5O68_07040;Dbxref=NCBI_GP:RJP81517.1;Name=RJP81517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001850047.1;locus_tag=C5O68_07040;product=DUF3290 domain-containing protein;protein_id=RJP81517.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 45461 45725 . + . ID=gene-C5O68_07045;Name=C5O68_07045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07045;pseudo=true PTQV01000039.1 Protein Homology CDS 45461 45725 . + 0 ID=cds-C5O68_07045;Parent=gene-C5O68_07045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001837066.1;locus_tag=C5O68_07045;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 45874 46353 . + . ID=gene-C5O68_07050;Name=C5O68_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07050 PTQV01000039.1 Protein Homology CDS 45874 46353 . + 0 ID=cds-RJP81518.1;Parent=gene-C5O68_07050;Dbxref=NCBI_GP:RJP81518.1;Name=RJP81518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284967.1;locus_tag=C5O68_07050;product=DUF421 domain-containing protein;protein_id=RJP81518.1;transl_table=11 PTQV01000039.1 Genbank gene 46408 48153 . + . ID=gene-C5O68_07055;Name=C5O68_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07055 PTQV01000039.1 Protein Homology CDS 46408 48153 . + 0 ID=cds-RJP81519.1;Parent=gene-C5O68_07055;Dbxref=NCBI_GP:RJP81519.1;Name=RJP81519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445654.1;locus_tag=C5O68_07055;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=RJP81519.1;transl_table=11 PTQV01000039.1 Genbank gene 48143 49885 . + . ID=gene-C5O68_07060;Name=C5O68_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07060 PTQV01000039.1 Protein Homology CDS 48143 49885 . + 0 ID=cds-RJP81520.1;Parent=gene-C5O68_07060;Dbxref=NCBI_GP:RJP81520.1;Name=RJP81520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359248.1;locus_tag=C5O68_07060;product=multidrug ABC transporter ATP-binding protein;protein_id=RJP81520.1;transl_table=11 PTQV01000039.1 Genbank gene 50015 50707 . + . ID=gene-C5O68_07065;Name=C5O68_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07065 PTQV01000039.1 Protein Homology CDS 50015 50707 . + 0 ID=cds-RJP81521.1;Parent=gene-C5O68_07065;Dbxref=NCBI_GP:RJP81521.1;Name=RJP81521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445656.1;locus_tag=C5O68_07065;product=sugar transferase;protein_id=RJP81521.1;transl_table=11 PTQV01000039.1 Genbank gene 50723 51976 . + . ID=gene-C5O68_07070;Name=C5O68_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07070 PTQV01000039.1 Protein Homology CDS 50723 51976 . + 0 ID=cds-RJP81522.1;Parent=gene-C5O68_07070;Dbxref=NCBI_GP:RJP81522.1;Name=RJP81522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359246.1;locus_tag=C5O68_07070;product=capsular biosynthesis protein;protein_id=RJP81522.1;transl_table=11 PTQV01000039.1 Genbank gene 52599 52886 . + . ID=gene-C5O68_07075;Name=C5O68_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07075 PTQV01000039.1 Protein Homology CDS 52599 52886 . + 0 ID=cds-RJP81523.1;Parent=gene-C5O68_07075;Dbxref=NCBI_GP:RJP81523.1;Name=RJP81523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280107.1;locus_tag=C5O68_07075;product=hypothetical protein;protein_id=RJP81523.1;transl_table=11 PTQV01000039.1 Genbank gene 53143 55269 . + . ID=gene-C5O68_07080;Name=pfbA;gbkey=Gene;gene=pfbA;gene_biotype=protein_coding;locus_tag=C5O68_07080 PTQV01000039.1 Protein Homology CDS 53143 55269 . + 0 ID=cds-RJP81524.1;Parent=gene-C5O68_07080;Dbxref=NCBI_GP:RJP81524.1;Name=RJP81524.1;gbkey=CDS;gene=pfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398455.1;locus_tag=C5O68_07080;product=multi-ligand-binding adhesin PfbA;protein_id=RJP81524.1;transl_table=11 PTQV01000039.1 Genbank gene 55253 55549 . + . ID=gene-C5O68_07085;Name=C5O68_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07085 PTQV01000039.1 Protein Homology CDS 55253 55549 . + 0 ID=cds-RJP81525.1;Parent=gene-C5O68_07085;Dbxref=NCBI_GP:RJP81525.1;Name=RJP81525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000239014.1;locus_tag=C5O68_07085;product=hypothetical protein;protein_id=RJP81525.1;transl_table=11 PTQV01000039.1 Genbank gene 55691 56092 . + . ID=gene-C5O68_07090;Name=C5O68_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07090 PTQV01000039.1 Protein Homology CDS 55691 56092 . + 0 ID=cds-RJP81526.1;Parent=gene-C5O68_07090;Dbxref=NCBI_GP:RJP81526.1;Name=RJP81526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822607.1;locus_tag=C5O68_07090;product=hypothetical protein;protein_id=RJP81526.1;transl_table=11 PTQV01000039.1 Genbank gene 56150 56791 . + . ID=gene-C5O68_07095;Name=C5O68_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07095 PTQV01000039.1 Protein Homology CDS 56150 56791 . + 0 ID=cds-RJP81527.1;Parent=gene-C5O68_07095;Dbxref=NCBI_GP:RJP81527.1;Name=RJP81527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359241.1;locus_tag=C5O68_07095;product=PhoU family transcriptional regulator;protein_id=RJP81527.1;transl_table=11 PTQV01000039.1 Genbank gene 56804 58279 . + . ID=gene-C5O68_07100;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=C5O68_07100 PTQV01000039.1 Protein Homology CDS 56804 58279 . + 0 ID=cds-RJP81528.1;Parent=gene-C5O68_07100;Dbxref=NCBI_GP:RJP81528.1;Name=RJP81528.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359240.1;locus_tag=C5O68_07100;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=RJP81528.1;transl_table=11 PTQV01000039.1 Genbank gene 58292 59302 . + . ID=gene-C5O68_07105;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=C5O68_07105 PTQV01000039.1 Protein Homology CDS 58292 59302 . + 0 ID=cds-RJP81529.1;Parent=gene-C5O68_07105;Dbxref=NCBI_GP:RJP81529.1;Name=RJP81529.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996568.1;locus_tag=C5O68_07105;product=UDP-glucose 4-epimerase GalE;protein_id=RJP81529.1;transl_table=11 PTQV01000039.1 Genbank gene 59481 60140 . + . ID=gene-C5O68_07110;Name=C5O68_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07110 PTQV01000039.1 Protein Homology CDS 59481 60140 . + 0 ID=cds-RJP81530.1;Parent=gene-C5O68_07110;Dbxref=NCBI_GP:RJP81530.1;Name=RJP81530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359238.1;locus_tag=C5O68_07110;product=DUF1868 domain-containing protein;protein_id=RJP81530.1;transl_table=11 PTQV01000039.1 Genbank gene 60165 61232 . + . ID=gene-C5O68_07115;Name=C5O68_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07115 PTQV01000039.1 Protein Homology CDS 60165 61232 . + 0 ID=cds-RJP81531.1;Parent=gene-C5O68_07115;Dbxref=NCBI_GP:RJP81531.1;Name=RJP81531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359237.1;locus_tag=C5O68_07115;product=iron ABC transporter substrate-binding protein;protein_id=RJP81531.1;transl_table=11 PTQV01000039.1 Genbank gene 61335 62345 . + . ID=gene-C5O68_07120;Name=C5O68_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07120 PTQV01000039.1 Protein Homology CDS 61335 62345 . + 0 ID=cds-RJP81532.1;Parent=gene-C5O68_07120;Dbxref=NCBI_GP:RJP81532.1;Name=RJP81532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359236.1;locus_tag=C5O68_07120;product=ABC transporter ATP-binding protein;protein_id=RJP81532.1;transl_table=11 PTQV01000039.1 Genbank gene 62357 64048 . + . ID=gene-C5O68_07125;Name=C5O68_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07125 PTQV01000039.1 Protein Homology CDS 62357 64048 . + 0 ID=cds-RJP81533.1;Parent=gene-C5O68_07125;Dbxref=NCBI_GP:RJP81533.1;Name=RJP81533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359235.1;locus_tag=C5O68_07125;product=iron ABC transporter permease;protein_id=RJP81533.1;transl_table=11 PTQV01000039.1 Genbank gene 64051 64761 . + . ID=gene-C5O68_07130;Name=C5O68_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07130 PTQV01000039.1 Protein Homology CDS 64051 64761 . + 0 ID=cds-RJP81534.1;Parent=gene-C5O68_07130;Dbxref=NCBI_GP:RJP81534.1;Name=RJP81534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359233.1;locus_tag=C5O68_07130;product=MgtC/SapB family protein;protein_id=RJP81534.1;transl_table=11 PTQV01000039.1 Genbank gene 64857 65225 . + . ID=gene-C5O68_07135;Name=C5O68_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07135 PTQV01000039.1 Protein Homology CDS 64857 65225 . + 0 ID=cds-RJP81535.1;Parent=gene-C5O68_07135;Dbxref=NCBI_GP:RJP81535.1;Name=RJP81535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359232.1;locus_tag=C5O68_07135;product=hypothetical protein;protein_id=RJP81535.1;transl_table=11 PTQV01000039.1 Genbank gene 65333 66334 . + . ID=gene-C5O68_07140;Name=C5O68_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07140 PTQV01000039.1 Protein Homology CDS 65333 66334 . + 0 ID=cds-RJP81536.1;Parent=gene-C5O68_07140;Dbxref=NCBI_GP:RJP81536.1;Name=RJP81536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359231.1;locus_tag=C5O68_07140;product=LacI family transcriptional regulator;protein_id=RJP81536.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 66942 67016 . + . ID=gene-C5O68_07145;Name=C5O68_07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07145;pseudo=true PTQV01000039.1 Protein Homology CDS 66942 67016 . + 0 ID=cds-C5O68_07145;Parent=gene-C5O68_07145;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_07145;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 67565 68926 . + . ID=gene-C5O68_07150;Name=C5O68_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07150 PTQV01000039.1 Protein Homology CDS 67565 68926 . + 0 ID=cds-RJP81537.1;Parent=gene-C5O68_07150;Dbxref=NCBI_GP:RJP81537.1;Name=RJP81537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445659.1;locus_tag=C5O68_07150;product=anthranilate synthase component I;protein_id=RJP81537.1;transl_table=11 PTQV01000039.1 Genbank gene 68923 69489 . + . ID=gene-C5O68_07155;Name=C5O68_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07155 PTQV01000039.1 Protein Homology CDS 68923 69489 . + 0 ID=cds-RJP81538.1;Parent=gene-C5O68_07155;Dbxref=NCBI_GP:RJP81538.1;Name=RJP81538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445660.1;locus_tag=C5O68_07155;product=type 1 glutamine amidotransferase;protein_id=RJP81538.1;transl_table=11 PTQV01000039.1 Genbank gene 69500 70504 . + . ID=gene-C5O68_07160;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=C5O68_07160 PTQV01000039.1 Protein Homology CDS 69500 70504 . + 0 ID=cds-RJP81539.1;Parent=gene-C5O68_07160;Dbxref=NCBI_GP:RJP81539.1;Name=RJP81539.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359227.1;locus_tag=C5O68_07160;product=anthranilate phosphoribosyltransferase;protein_id=RJP81539.1;transl_table=11 PTQV01000039.1 Genbank gene 70501 71268 . + . ID=gene-C5O68_07165;Name=C5O68_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07165 PTQV01000039.1 Protein Homology CDS 70501 71268 . + 0 ID=cds-RJP81540.1;Parent=gene-C5O68_07165;Dbxref=NCBI_GP:RJP81540.1;Name=RJP81540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445662.1;locus_tag=C5O68_07165;product=indole-3-glycerol phosphate synthase TrpC;protein_id=RJP81540.1;transl_table=11 PTQV01000039.1 Genbank gene 71225 71854 . + . ID=gene-C5O68_07170;Name=C5O68_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07170 PTQV01000039.1 Protein Homology CDS 71225 71854 . + 0 ID=cds-RJP81541.1;Parent=gene-C5O68_07170;Dbxref=NCBI_GP:RJP81541.1;Name=RJP81541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359225.1;locus_tag=C5O68_07170;product=phosphoribosylanthranilate isomerase;protein_id=RJP81541.1;transl_table=11 PTQV01000039.1 Genbank gene 71832 73055 . + . ID=gene-C5O68_07175;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=C5O68_07175 PTQV01000039.1 Protein Homology CDS 71832 73055 . + 0 ID=cds-RJP81542.1;Parent=gene-C5O68_07175;Dbxref=NCBI_GP:RJP81542.1;Name=RJP81542.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445664.1;locus_tag=C5O68_07175;product=tryptophan synthase subunit beta;protein_id=RJP81542.1;transl_table=11 PTQV01000039.1 Genbank gene 73048 73824 . + . ID=gene-C5O68_07180;Name=C5O68_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07180 PTQV01000039.1 Protein Homology CDS 73048 73824 . + 0 ID=cds-RJP81543.1;Parent=gene-C5O68_07180;Dbxref=NCBI_GP:RJP81543.1;Name=RJP81543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359223.1;locus_tag=C5O68_07180;product=tryptophan synthase subunit alpha;protein_id=RJP81543.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 73796 73894 . - . ID=gene-C5O68_07185;Name=C5O68_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07185;pseudo=true PTQV01000039.1 Protein Homology CDS 73796 73894 . - 0 ID=cds-C5O68_07185;Parent=gene-C5O68_07185;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359220.1;locus_tag=C5O68_07185;product=prepilin peptidase;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 74018 74749 . + . ID=gene-C5O68_07190;Name=C5O68_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07190 PTQV01000039.1 Protein Homology CDS 74018 74749 . + 0 ID=cds-RJP81544.1;Parent=gene-C5O68_07190;Dbxref=NCBI_GP:RJP81544.1;Name=RJP81544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359222.1;locus_tag=C5O68_07190;product=hypothetical protein;protein_id=RJP81544.1;transl_table=11 PTQV01000039.1 Genbank gene 74764 75915 . + . ID=gene-C5O68_07195;Name=C5O68_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07195 PTQV01000039.1 Protein Homology CDS 74764 75915 . + 0 ID=cds-RJP81545.1;Parent=gene-C5O68_07195;Dbxref=NCBI_GP:RJP81545.1;Name=RJP81545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359221.1;locus_tag=C5O68_07195;product=ImmA/IrrE family metallo-endopeptidase;protein_id=RJP81545.1;transl_table=11 PTQV01000039.1 Genbank gene 75967 76626 . - . ID=gene-C5O68_07200;Name=C5O68_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07200 PTQV01000039.1 Protein Homology CDS 75967 76626 . - 0 ID=cds-RJP81546.1;Parent=gene-C5O68_07200;Dbxref=NCBI_GP:RJP81546.1;Name=RJP81546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445666.1;locus_tag=C5O68_07200;product=prepilin peptidase;protein_id=RJP81546.1;transl_table=11 PTQV01000039.1 Genbank gene 76696 77151 . + . ID=gene-C5O68_07205;Name=C5O68_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07205 PTQV01000039.1 Protein Homology CDS 76696 77151 . + 0 ID=cds-RJP81547.1;Parent=gene-C5O68_07205;Dbxref=NCBI_GP:RJP81547.1;Name=RJP81547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015605875.1;locus_tag=C5O68_07205;product=N-acetyltransferase;protein_id=RJP81547.1;transl_table=11 PTQV01000039.1 Genbank gene 77334 78335 . + . ID=gene-C5O68_07210;Name=C5O68_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07210 PTQV01000039.1 Protein Homology CDS 77334 78335 . + 0 ID=cds-RJP81548.1;Parent=gene-C5O68_07210;Dbxref=NCBI_GP:RJP81548.1;Name=RJP81548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230206.1;locus_tag=C5O68_07210;product=LacI family transcriptional regulator;protein_id=RJP81548.1;transl_table=11 PTQV01000039.1 Genbank gene 78489 79406 . + . ID=gene-C5O68_07215;Name=C5O68_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07215 PTQV01000039.1 Protein Homology CDS 78489 79406 . + 0 ID=cds-RJP81549.1;Parent=gene-C5O68_07215;Dbxref=NCBI_GP:RJP81549.1;Name=RJP81549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084977.1;locus_tag=C5O68_07215;product=sugar ABC transporter permease;protein_id=RJP81549.1;transl_table=11 PTQV01000039.1 Genbank gene 79417 80307 . + . ID=gene-C5O68_07220;Name=C5O68_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07220 PTQV01000039.1 Protein Homology CDS 79417 80307 . + 0 ID=cds-RJP81550.1;Parent=gene-C5O68_07220;Dbxref=NCBI_GP:RJP81550.1;Name=RJP81550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797960.1;locus_tag=C5O68_07220;product=carbohydrate ABC transporter permease;protein_id=RJP81550.1;transl_table=11 PTQV01000039.1 Genbank gene 80336 81952 . + . ID=gene-C5O68_07225;Name=C5O68_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07225 PTQV01000039.1 Protein Homology CDS 80336 81952 . + 0 ID=cds-RJP81551.1;Parent=gene-C5O68_07225;Dbxref=NCBI_GP:RJP81551.1;Name=RJP81551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669747.1;locus_tag=C5O68_07225;product=ABC transporter substrate-binding protein;protein_id=RJP81551.1;transl_table=11 PTQV01000039.1 Genbank gene 81962 83281 . + . ID=gene-C5O68_07230;Name=C5O68_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07230 PTQV01000039.1 Protein Homology CDS 81962 83281 . + 0 ID=cds-RJP81552.1;Parent=gene-C5O68_07230;Dbxref=NCBI_GP:RJP81552.1;Name=RJP81552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359209.1;locus_tag=C5O68_07230;product=beta-fructofuranosidase;protein_id=RJP81552.1;transl_table=11 PTQV01000039.1 Genbank gene 83488 83560 . - . ID=gene-C5O68_07235;Name=C5O68_07235;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_07235 PTQV01000039.1 tRNAscan-SE tRNA 83488 83560 . - . ID=rna-C5O68_07235;Parent=gene-C5O68_07235;anticodon=(pos:complement(83525..83527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_07235;product=tRNA-Lys PTQV01000039.1 tRNAscan-SE exon 83488 83560 . - . ID=exon-C5O68_07235-1;Parent=rna-C5O68_07235;anticodon=(pos:complement(83525..83527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_07235;product=tRNA-Lys PTQV01000039.1 Genbank gene 83825 85096 . - . ID=gene-C5O68_07240;Name=C5O68_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07240 PTQV01000039.1 Protein Homology CDS 83825 85096 . - 0 ID=cds-RJP81553.1;Parent=gene-C5O68_07240;Dbxref=NCBI_GP:RJP81553.1;Name=RJP81553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359208.1;locus_tag=C5O68_07240;product=replication-associated recombination protein A;protein_id=RJP81553.1;transl_table=11 PTQV01000039.1 Genbank gene 85394 85609 . + . ID=gene-C5O68_07245;Name=C5O68_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07245 PTQV01000039.1 Protein Homology CDS 85394 85609 . + 0 ID=cds-RJP81584.1;Parent=gene-C5O68_07245;Dbxref=NCBI_GP:RJP81584.1;Name=RJP81584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001860604.1;locus_tag=C5O68_07245;product=hypothetical protein;protein_id=RJP81584.1;transl_table=11 PTQV01000039.1 Genbank gene 85782 85952 . + . ID=gene-C5O68_07250;Name=C5O68_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07250 PTQV01000039.1 Protein Homology CDS 85782 85952 . + 0 ID=cds-RJP81583.1;Parent=gene-C5O68_07250;Dbxref=NCBI_GP:RJP81583.1;Name=RJP81583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001840169.1;locus_tag=C5O68_07250;product=hypothetical protein;protein_id=RJP81583.1;transl_table=11 PTQV01000039.1 Genbank gene 86062 86268 . + . ID=gene-C5O68_07255;Name=C5O68_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07255 PTQV01000039.1 Protein Homology CDS 86062 86268 . + 0 ID=cds-RJP81554.1;Parent=gene-C5O68_07255;Dbxref=NCBI_GP:RJP81554.1;Name=RJP81554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359205.1;locus_tag=C5O68_07255;product=type II toxin-antitoxin system HicA family toxin;protein_id=RJP81554.1;transl_table=11 PTQV01000039.1 Genbank gene 86305 86757 . + . ID=gene-C5O68_07260;Name=C5O68_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07260 PTQV01000039.1 Protein Homology CDS 86305 86757 . + 0 ID=cds-RJP81555.1;Parent=gene-C5O68_07260;Dbxref=NCBI_GP:RJP81555.1;Name=RJP81555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359204.1;locus_tag=C5O68_07260;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=RJP81555.1;transl_table=11 PTQV01000039.1 Genbank gene 87048 87518 . + . ID=gene-C5O68_07265;Name=C5O68_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07265 PTQV01000039.1 Protein Homology CDS 87048 87518 . + 0 ID=cds-RJP81556.1;Parent=gene-C5O68_07265;Dbxref=NCBI_GP:RJP81556.1;Name=RJP81556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359203.1;locus_tag=C5O68_07265;product=DUF3013 domain-containing protein;protein_id=RJP81556.1;transl_table=11 PTQV01000039.1 Genbank gene 87574 88089 . + . ID=gene-C5O68_07270;Name=C5O68_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07270 PTQV01000039.1 Protein Homology CDS 87574 88089 . + 0 ID=cds-RJP81557.1;Parent=gene-C5O68_07270;Dbxref=NCBI_GP:RJP81557.1;Name=RJP81557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006595081.1;locus_tag=C5O68_07270;product=hypothetical protein;protein_id=RJP81557.1;transl_table=11 PTQV01000039.1 Genbank gene 88139 88303 . + . ID=gene-C5O68_07275;Name=C5O68_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07275 PTQV01000039.1 Protein Homology CDS 88139 88303 . + 0 ID=cds-RJP81558.1;Parent=gene-C5O68_07275;Dbxref=NCBI_GP:RJP81558.1;Name=RJP81558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399539.1;locus_tag=C5O68_07275;product=7%2C8-dihydro-8-oxoguanine-triphosphatase;protein_id=RJP81558.1;transl_table=11 PTQV01000039.1 Genbank gene 88609 89436 . + . ID=gene-C5O68_07280;Name=C5O68_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07280 PTQV01000039.1 Protein Homology CDS 88609 89436 . + 0 ID=cds-RJP81559.1;Parent=gene-C5O68_07280;Dbxref=NCBI_GP:RJP81559.1;Name=RJP81559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397065.1;locus_tag=C5O68_07280;product=replication initiator protein;protein_id=RJP81559.1;transl_table=11 PTQV01000039.1 Genbank gene 89605 90963 . + . ID=gene-C5O68_07285;Name=C5O68_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07285 PTQV01000039.1 Protein Homology CDS 89605 90963 . + 0 ID=cds-RJP81560.1;Parent=gene-C5O68_07285;Dbxref=NCBI_GP:RJP81560.1;Name=RJP81560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397066.1;locus_tag=C5O68_07285;product=DNA (cytosine-5-)-methyltransferase;protein_id=RJP81560.1;transl_table=11 PTQV01000039.1 Genbank gene 90944 91372 . + . ID=gene-C5O68_07290;Name=C5O68_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07290 PTQV01000039.1 Protein Homology CDS 90944 91372 . + 0 ID=cds-RJP81561.1;Parent=gene-C5O68_07290;Dbxref=NCBI_GP:RJP81561.1;Name=RJP81561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397067.1;locus_tag=C5O68_07290;product=hypothetical protein;protein_id=RJP81561.1;transl_table=11 PTQV01000039.1 Genbank gene 91382 91765 . + . ID=gene-C5O68_07295;Name=C5O68_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07295 PTQV01000039.1 Protein Homology CDS 91382 91765 . + 0 ID=cds-RJP81562.1;Parent=gene-C5O68_07295;Dbxref=NCBI_GP:RJP81562.1;Name=RJP81562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399349.1;locus_tag=C5O68_07295;product=hypothetical protein;protein_id=RJP81562.1;transl_table=11 PTQV01000039.1 Genbank gene 91775 92008 . + . ID=gene-C5O68_07300;Name=C5O68_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07300 PTQV01000039.1 Protein Homology CDS 91775 92008 . + 0 ID=cds-RJP81563.1;Parent=gene-C5O68_07300;Dbxref=NCBI_GP:RJP81563.1;Name=RJP81563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738851.1;locus_tag=C5O68_07300;product=transcriptional regulator;protein_id=RJP81563.1;transl_table=11 PTQV01000039.1 Genbank gene 92011 92592 . + . ID=gene-C5O68_07305;Name=C5O68_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07305 PTQV01000039.1 Protein Homology CDS 92011 92592 . + 0 ID=cds-RJP81564.1;Parent=gene-C5O68_07305;Dbxref=NCBI_GP:RJP81564.1;Name=RJP81564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018165725.1;locus_tag=C5O68_07305;product=CPBP family intramembrane metalloprotease;protein_id=RJP81564.1;transl_table=11 PTQV01000039.1 Genbank gene 92668 93156 . + . ID=gene-C5O68_07310;Name=C5O68_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07310 PTQV01000039.1 Protein Homology CDS 92668 93156 . + 0 ID=cds-RJP81565.1;Parent=gene-C5O68_07310;Dbxref=NCBI_GP:RJP81565.1;Name=RJP81565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028224.1;locus_tag=C5O68_07310;product=2-carboxy-1%2C4-naphthoquinone phytyltransferase;protein_id=RJP81565.1;transl_table=11 PTQV01000039.1 Genbank gene 93156 94976 . + . ID=gene-C5O68_07315;Name=C5O68_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07315 PTQV01000039.1 Protein Homology CDS 93156 94976 . + 0 ID=cds-RJP81566.1;Parent=gene-C5O68_07315;Dbxref=NCBI_GP:RJP81566.1;Name=RJP81566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028225.1;locus_tag=C5O68_07315;product=conjugal transfer protein TraG;protein_id=RJP81566.1;transl_table=11 PTQV01000039.1 Genbank gene 94994 95236 . + . ID=gene-C5O68_07320;Name=C5O68_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07320 PTQV01000039.1 Protein Homology CDS 94994 95236 . + 0 ID=cds-RJP81567.1;Parent=gene-C5O68_07320;Dbxref=NCBI_GP:RJP81567.1;Name=RJP81567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012678629.1;locus_tag=C5O68_07320;product=hypothetical protein;protein_id=RJP81567.1;transl_table=11 PTQV01000039.1 Genbank gene 95256 96107 . + . ID=gene-C5O68_07325;Name=C5O68_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07325 PTQV01000039.1 Protein Homology CDS 95256 96107 . + 0 ID=cds-RJP81568.1;Parent=gene-C5O68_07325;Dbxref=NCBI_GP:RJP81568.1;Name=RJP81568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399352.1;locus_tag=C5O68_07325;product=conjugal transfer protein TrbL;protein_id=RJP81568.1;transl_table=11 PTQV01000039.1 Genbank gene 96297 96650 . + . ID=gene-C5O68_07330;Name=C5O68_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07330 PTQV01000039.1 Protein Homology CDS 96297 96650 . + 0 ID=cds-RJP81569.1;Parent=gene-C5O68_07330;Dbxref=NCBI_GP:RJP81569.1;Name=RJP81569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028689.1;locus_tag=C5O68_07330;product=PrgI family protein;protein_id=RJP81569.1;transl_table=11 PTQV01000039.1 Genbank gene 96607 98958 . + . ID=gene-C5O68_07335;Name=C5O68_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07335 PTQV01000039.1 Protein Homology CDS 96607 98958 . + 0 ID=cds-RJP81570.1;Parent=gene-C5O68_07335;Dbxref=NCBI_GP:RJP81570.1;Name=RJP81570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738651.1;locus_tag=C5O68_07335;product=AAA family ATPase;protein_id=RJP81570.1;transl_table=11 PTQV01000039.1 Genbank gene 98955 101633 . + . ID=gene-C5O68_07340;Name=C5O68_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07340 PTQV01000039.1 Protein Homology CDS 98955 101633 . + 0 ID=cds-RJP81571.1;Parent=gene-C5O68_07340;Dbxref=NCBI_GP:RJP81571.1;Name=RJP81571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397076.1;locus_tag=C5O68_07340;product=CHAP domain-containing protein;protein_id=RJP81571.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 101837 102057 . - . ID=gene-C5O68_07345;Name=C5O68_07345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07345;pseudo=true PTQV01000039.1 Protein Homology CDS 101837 102057 . - 0 ID=cds-C5O68_07345;Parent=gene-C5O68_07345;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002399082.1;locus_tag=C5O68_07345;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 102342 104264 . + . ID=gene-C5O68_07350;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=C5O68_07350 PTQV01000039.1 Protein Homology CDS 102342 104264 . + 0 ID=cds-RJP81572.1;Parent=gene-C5O68_07350;Dbxref=NCBI_GP:RJP81572.1;Name=RJP81572.1;gbkey=CDS;gene=ltrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165607.1;locus_tag=C5O68_07350;product=group II intron reverse transcriptase/maturase;protein_id=RJP81572.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 104313 104399 . + . ID=gene-C5O68_07355;Name=C5O68_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07355;pseudo=true PTQV01000039.1 Protein Homology CDS 104313 104399 . + 0 ID=cds-C5O68_07355;Parent=gene-C5O68_07355;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303681.1;locus_tag=C5O68_07355;product=peptidase P60;pseudo=true;transl_table=11 PTQV01000039.1 Genbank pseudogene 104403 104525 . + . ID=gene-C5O68_07360;Name=C5O68_07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07360;pseudo=true PTQV01000039.1 Protein Homology CDS 104403 104525 . + 0 ID=cds-C5O68_07360;Parent=gene-C5O68_07360;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014623257.1;locus_tag=C5O68_07360;product=CHAP domain-containing protein;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 104614 105459 . - . ID=gene-C5O68_07365;Name=C5O68_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07365 PTQV01000039.1 Protein Homology CDS 104614 105459 . - 0 ID=cds-RJP81573.1;Parent=gene-C5O68_07365;Dbxref=NCBI_GP:RJP81573.1;Name=RJP81573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_688285.1;locus_tag=C5O68_07365;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=RJP81573.1;transl_table=11 PTQV01000039.1 Genbank gene 105456 106046 . - . ID=gene-C5O68_07370;Name=C5O68_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07370 PTQV01000039.1 Protein Homology CDS 105456 106046 . - 0 ID=cds-RJP81574.1;Parent=gene-C5O68_07370;Dbxref=NCBI_GP:RJP81574.1;Name=RJP81574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003069339.1;locus_tag=C5O68_07370;product=abortive phage infection protein;protein_id=RJP81574.1;transl_table=11 PTQV01000039.1 Genbank gene 106240 111144 . + . ID=gene-C5O68_07375;Name=C5O68_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07375 PTQV01000039.1 Protein Homology CDS 106240 111144 . + 0 ID=cds-RJP81585.1;Parent=gene-C5O68_07375;Dbxref=NCBI_GP:RJP81585.1;Name=RJP81585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739811.1;locus_tag=C5O68_07375;product=glucan-binding protein;protein_id=RJP81585.1;transl_table=11 PTQV01000039.1 Genbank gene 111145 111336 . + . ID=gene-C5O68_07380;Name=C5O68_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07380 PTQV01000039.1 Protein Homology CDS 111145 111336 . + 0 ID=cds-RJP81575.1;Parent=gene-C5O68_07380;Dbxref=NCBI_GP:RJP81575.1;Name=RJP81575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003093624.1;locus_tag=C5O68_07380;product=calcium-binding protein;protein_id=RJP81575.1;transl_table=11 PTQV01000039.1 Genbank gene 111320 111871 . + . ID=gene-C5O68_07385;Name=C5O68_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07385 PTQV01000039.1 Protein Homology CDS 111320 111871 . + 0 ID=cds-RJP81576.1;Parent=gene-C5O68_07385;Dbxref=NCBI_GP:RJP81576.1;Name=RJP81576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294879.1;locus_tag=C5O68_07385;product=hypothetical protein;protein_id=RJP81576.1;transl_table=11 PTQV01000039.1 Genbank gene 111923 118726 . + . ID=gene-C5O68_07390;Name=C5O68_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07390 PTQV01000039.1 Protein Homology CDS 111923 118726 . + 0 ID=cds-RJP81577.1;Parent=gene-C5O68_07390;Dbxref=NCBI_GP:RJP81577.1;Name=RJP81577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071192.1;locus_tag=C5O68_07390;product=hypothetical protein;protein_id=RJP81577.1;transl_table=11 PTQV01000039.1 Genbank gene 118796 119095 . + . ID=gene-C5O68_07395;Name=C5O68_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07395 PTQV01000039.1 Protein Homology CDS 118796 119095 . + 0 ID=cds-RJP81578.1;Parent=gene-C5O68_07395;Dbxref=NCBI_GP:RJP81578.1;Name=RJP81578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398051.1;locus_tag=C5O68_07395;product=hypothetical protein;protein_id=RJP81578.1;transl_table=11 PTQV01000039.1 Genbank gene 119110 119400 . + . ID=gene-C5O68_07400;Name=C5O68_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07400 PTQV01000039.1 Protein Homology CDS 119110 119400 . + 0 ID=cds-RJP81579.1;Parent=gene-C5O68_07400;Dbxref=NCBI_GP:RJP81579.1;Name=RJP81579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738782.1;locus_tag=C5O68_07400;product=hypothetical protein;protein_id=RJP81579.1;transl_table=11 PTQV01000039.1 Genbank pseudogene 119436 119612 . - . ID=gene-C5O68_07405;Name=C5O68_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07405;pseudo=true PTQV01000039.1 Protein Homology CDS 119436 119612 . - 0 ID=cds-C5O68_07405;Parent=gene-C5O68_07405;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811622.1;locus_tag=C5O68_07405;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;pseudo=true;transl_table=11 PTQV01000039.1 Genbank pseudogene 119812 119988 . + . ID=gene-C5O68_07410;Name=C5O68_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07410;pseudo=true PTQV01000039.1 Protein Homology CDS 119812 119988 . + 0 ID=cds-C5O68_07410;Parent=gene-C5O68_07410;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398131.1;locus_tag=C5O68_07410;product=cell filamentation protein Fic;pseudo=true;transl_table=11 PTQV01000039.1 Genbank gene 120291 121528 . + . ID=gene-C5O68_07415;Name=C5O68_07415;end_range=121528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07415;partial=true PTQV01000039.1 Protein Homology CDS 120291 121528 . + 0 ID=cds-RJP81580.1;Parent=gene-C5O68_07415;Dbxref=NCBI_GP:RJP81580.1;Name=RJP81580.1;end_range=121528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017271.1;locus_tag=C5O68_07415;partial=true;product=hypothetical protein;protein_id=RJP81580.1;transl_table=11 ##sequence-region PTQV01000003.1 1 47695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000003.1 Genbank region 1 47695 . + . ID=PTQV01000003.1:1..47695;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000003.1 Genbank gene 900 2018 . - . ID=gene-C5O68_00865;Name=C5O68_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00865 PTQV01000003.1 Protein Homology CDS 900 2018 . - 0 ID=cds-RJP84426.1;Parent=gene-C5O68_00865;Dbxref=NCBI_GP:RJP84426.1;Name=RJP84426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447147.1;locus_tag=C5O68_00865;product=CHAP domain-containing protein;protein_id=RJP84426.1;transl_table=11 PTQV01000003.1 Genbank gene 2107 2373 . - . ID=gene-C5O68_00870;Name=C5O68_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00870 PTQV01000003.1 Protein Homology CDS 2107 2373 . - 0 ID=cds-RJP84427.1;Parent=gene-C5O68_00870;Dbxref=NCBI_GP:RJP84427.1;Name=RJP84427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447148.1;locus_tag=C5O68_00870;product=hypothetical protein;protein_id=RJP84427.1;transl_table=11 PTQV01000003.1 Genbank gene 2375 3727 . - . ID=gene-C5O68_00875;Name=C5O68_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00875 PTQV01000003.1 Protein Homology CDS 2375 3727 . - 0 ID=cds-RJP84428.1;Parent=gene-C5O68_00875;Dbxref=NCBI_GP:RJP84428.1;Name=RJP84428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359599.1;locus_tag=C5O68_00875;product=replicative DNA helicase;protein_id=RJP84428.1;transl_table=11 PTQV01000003.1 Genbank gene 3771 4223 . - . ID=gene-C5O68_00880;Name=C5O68_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00880 PTQV01000003.1 Protein Homology CDS 3771 4223 . - 0 ID=cds-RJP84429.1;Parent=gene-C5O68_00880;Dbxref=NCBI_GP:RJP84429.1;Name=RJP84429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359600.1;locus_tag=C5O68_00880;product=50S ribosomal protein L9;protein_id=RJP84429.1;transl_table=11 PTQV01000003.1 Genbank gene 4220 6193 . - . ID=gene-C5O68_00885;Name=C5O68_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00885 PTQV01000003.1 Protein Homology CDS 4220 6193 . - 0 ID=cds-RJP84430.1;Parent=gene-C5O68_00885;Dbxref=NCBI_GP:RJP84430.1;Name=RJP84430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359601.1;locus_tag=C5O68_00885;product=DHH family phosphoesterase;protein_id=RJP84430.1;transl_table=11 PTQV01000003.1 Genbank gene 6329 6877 . - . ID=gene-C5O68_00890;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=C5O68_00890 PTQV01000003.1 Protein Homology CDS 6329 6877 . - 0 ID=cds-RJP84431.1;Parent=gene-C5O68_00890;Dbxref=NCBI_GP:RJP84431.1;Name=RJP84431.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359602.1;locus_tag=C5O68_00890;product=ribosome-associated translation inhibitor RaiA;protein_id=RJP84431.1;transl_table=11 PTQV01000003.1 Genbank gene 6957 7619 . - . ID=gene-C5O68_00895;Name=C5O68_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00895 PTQV01000003.1 Protein Homology CDS 6957 7619 . - 0 ID=cds-RJP84432.1;Parent=gene-C5O68_00895;Dbxref=NCBI_GP:RJP84432.1;Name=RJP84432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359603.1;locus_tag=C5O68_00895;product=amidophosphoribosyltransferase;protein_id=RJP84432.1;transl_table=11 PTQV01000003.1 Genbank gene 7616 8914 . - . ID=gene-C5O68_00900;Name=C5O68_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00900 PTQV01000003.1 Protein Homology CDS 7616 8914 . - 0 ID=cds-RJP84433.1;Parent=gene-C5O68_00900;Dbxref=NCBI_GP:RJP84433.1;Name=RJP84433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359604.1;locus_tag=C5O68_00900;product=DNA/RNA helicase;protein_id=RJP84433.1;transl_table=11 PTQV01000003.1 Genbank gene 8970 9605 . + . ID=gene-C5O68_00905;Name=C5O68_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00905 PTQV01000003.1 Protein Homology CDS 8970 9605 . + 0 ID=cds-RJP84434.1;Parent=gene-C5O68_00905;Dbxref=NCBI_GP:RJP84434.1;Name=RJP84434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359605.1;locus_tag=C5O68_00905;product=YigZ family protein;protein_id=RJP84434.1;transl_table=11 PTQV01000003.1 Genbank gene 9890 10816 . + . ID=gene-C5O68_00910;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=C5O68_00910 PTQV01000003.1 Protein Homology CDS 9890 10816 . + 0 ID=cds-RJP84435.1;Parent=gene-C5O68_00910;Dbxref=NCBI_GP:RJP84435.1;Name=RJP84435.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447156.1;locus_tag=C5O68_00910;product=cysteine synthase A;protein_id=RJP84435.1;transl_table=11 PTQV01000003.1 Genbank gene 10938 11978 . - . ID=gene-C5O68_00915;Name=C5O68_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00915 PTQV01000003.1 Protein Homology CDS 10938 11978 . - 0 ID=cds-RJP84436.1;Parent=gene-C5O68_00915;Dbxref=NCBI_GP:RJP84436.1;Name=RJP84436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003053075.1;locus_tag=C5O68_00915;product=elongation factor Ts;protein_id=RJP84436.1;transl_table=11 PTQV01000003.1 Genbank gene 12057 12836 . - . ID=gene-C5O68_00920;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=C5O68_00920 PTQV01000003.1 Protein Homology CDS 12057 12836 . - 0 ID=cds-RJP84437.1;Parent=gene-C5O68_00920;Dbxref=NCBI_GP:RJP84437.1;Name=RJP84437.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447158.1;locus_tag=C5O68_00920;product=30S ribosomal protein S2;protein_id=RJP84437.1;transl_table=11 PTQV01000003.1 Genbank gene 13060 14238 . - . ID=gene-C5O68_00925;Name=C5O68_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00925 PTQV01000003.1 Protein Homology CDS 13060 14238 . - 0 ID=cds-RJP84438.1;Parent=gene-C5O68_00925;Dbxref=NCBI_GP:RJP84438.1;Name=RJP84438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359612.1;locus_tag=C5O68_00925;product=CHAP domain-containing protein;protein_id=RJP84438.1;transl_table=11 PTQV01000003.1 Genbank gene 14332 14826 . - . ID=gene-C5O68_00930;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=C5O68_00930 PTQV01000003.1 Protein Homology CDS 14332 14826 . - 0 ID=cds-RJP84439.1;Parent=gene-C5O68_00930;Dbxref=NCBI_GP:RJP84439.1;Name=RJP84439.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359613.1;locus_tag=C5O68_00930;product=rod shape-determining protein MreD;protein_id=RJP84439.1;transl_table=11 PTQV01000003.1 Genbank gene 14826 15644 . - . ID=gene-C5O68_00935;Name=C5O68_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00935 PTQV01000003.1 Protein Homology CDS 14826 15644 . - 0 ID=cds-RJP84440.1;Parent=gene-C5O68_00935;Dbxref=NCBI_GP:RJP84440.1;Name=RJP84440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359614.1;locus_tag=C5O68_00935;product=rod shape-determining protein MreC;protein_id=RJP84440.1;transl_table=11 PTQV01000003.1 Genbank gene 15703 16497 . - . ID=gene-C5O68_00940;Name=C5O68_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00940 PTQV01000003.1 Protein Homology CDS 15703 16497 . - 0 ID=cds-RJP84441.1;Parent=gene-C5O68_00940;Dbxref=NCBI_GP:RJP84441.1;Name=RJP84441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359615.1;locus_tag=C5O68_00940;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RJP84441.1;transl_table=11 PTQV01000003.1 Genbank gene 16490 17329 . - . ID=gene-C5O68_00945;Name=C5O68_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00945 PTQV01000003.1 Protein Homology CDS 16490 17329 . - 0 ID=cds-RJP84442.1;Parent=gene-C5O68_00945;Dbxref=NCBI_GP:RJP84442.1;Name=RJP84442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359616.1;locus_tag=C5O68_00945;product=energy-coupling factor transporter ATPase;protein_id=RJP84442.1;transl_table=11 PTQV01000003.1 Genbank gene 17314 18141 . - . ID=gene-C5O68_00950;Name=C5O68_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00950 PTQV01000003.1 Protein Homology CDS 17314 18141 . - 0 ID=cds-RJP84443.1;Parent=gene-C5O68_00950;Dbxref=NCBI_GP:RJP84443.1;Name=RJP84443.1;Note=with CbiNQ forms the ABC transporter for cobalt import%3B Staphylococcus has two adjacent copies of this gene;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447164.1;locus_tag=C5O68_00950;product=energy-coupling factor transporter ATPase;protein_id=RJP84443.1;transl_table=11 PTQV01000003.1 Genbank gene 18138 18683 . - . ID=gene-C5O68_00955;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=C5O68_00955 PTQV01000003.1 Protein Homology CDS 18138 18683 . - 0 ID=cds-RJP84444.1;Parent=gene-C5O68_00955;Dbxref=NCBI_GP:RJP84444.1;Name=RJP84444.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359618.1;locus_tag=C5O68_00955;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=RJP84444.1;transl_table=11 PTQV01000003.1 Genbank gene 18694 19545 . - . ID=gene-C5O68_00960;Name=C5O68_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00960 PTQV01000003.1 Protein Homology CDS 18694 19545 . - 0 ID=cds-RJP84445.1;Parent=gene-C5O68_00960;Dbxref=NCBI_GP:RJP84445.1;Name=RJP84445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359619.1;locus_tag=C5O68_00960;product=helix-turn-helix domain-containing protein;protein_id=RJP84445.1;transl_table=11 PTQV01000003.1 Genbank gene 19578 20861 . - . ID=gene-C5O68_00965;Name=C5O68_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00965 PTQV01000003.1 Protein Homology CDS 19578 20861 . - 0 ID=cds-RJP84446.1;Parent=gene-C5O68_00965;Dbxref=NCBI_GP:RJP84446.1;Name=RJP84446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359620.1;locus_tag=C5O68_00965;product=insulinase family protein;protein_id=RJP84446.1;transl_table=11 PTQV01000003.1 Genbank gene 20858 22108 . - . ID=gene-C5O68_00970;Name=C5O68_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00970 PTQV01000003.1 Protein Homology CDS 20858 22108 . - 0 ID=cds-RJP84447.1;Parent=gene-C5O68_00970;Dbxref=NCBI_GP:RJP84447.1;Name=RJP84447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359621.1;locus_tag=C5O68_00970;product=insulinase family protein;protein_id=RJP84447.1;transl_table=11 PTQV01000003.1 Genbank gene 22267 22635 . + . ID=gene-C5O68_00975;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=C5O68_00975 PTQV01000003.1 Protein Homology CDS 22267 22635 . + 0 ID=cds-RJP84448.1;Parent=gene-C5O68_00975;Dbxref=NCBI_GP:RJP84448.1;Name=RJP84448.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359622.1;locus_tag=C5O68_00975;product=S4 domain-containing protein YaaA;protein_id=RJP84448.1;transl_table=11 PTQV01000003.1 Genbank gene 22638 23729 . + . ID=gene-C5O68_00980;Name=C5O68_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00980 PTQV01000003.1 Protein Homology CDS 22638 23729 . + 0 ID=cds-RJP84449.1;Parent=gene-C5O68_00980;Dbxref=NCBI_GP:RJP84449.1;Name=RJP84449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359623.1;locus_tag=C5O68_00980;product=DNA replication/repair protein RecF;protein_id=RJP84449.1;transl_table=11 PTQV01000003.1 Genbank gene 23786 25264 . - . ID=gene-C5O68_00985;Name=C5O68_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00985 PTQV01000003.1 Protein Homology CDS 23786 25264 . - 0 ID=cds-RJP84450.1;Parent=gene-C5O68_00985;Dbxref=NCBI_GP:RJP84450.1;Name=RJP84450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447171.1;locus_tag=C5O68_00985;product=IMP dehydrogenase;protein_id=RJP84450.1;transl_table=11 PTQV01000003.1 Genbank gene 25416 26441 . - . ID=gene-C5O68_00990;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=C5O68_00990 PTQV01000003.1 Protein Homology CDS 25416 26441 . - 0 ID=cds-RJP84451.1;Parent=gene-C5O68_00990;Dbxref=NCBI_GP:RJP84451.1;Name=RJP84451.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447172.1;locus_tag=C5O68_00990;product=tryptophan--tRNA ligase;protein_id=RJP84451.1;transl_table=11 PTQV01000003.1 Genbank gene 26647 28269 . + . ID=gene-C5O68_00995;Name=C5O68_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_00995 PTQV01000003.1 Protein Homology CDS 26647 28269 . + 0 ID=cds-RJP84452.1;Parent=gene-C5O68_00995;Dbxref=NCBI_GP:RJP84452.1;Name=RJP84452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015511338.1;locus_tag=C5O68_00995;product=ABC-F family ATPase;protein_id=RJP84452.1;transl_table=11 PTQV01000003.1 Genbank gene 28331 30874 . + . ID=gene-C5O68_01000;Name=C5O68_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01000 PTQV01000003.1 Protein Homology CDS 28331 30874 . + 0 ID=cds-RJP84453.1;Parent=gene-C5O68_01000;Dbxref=NCBI_GP:RJP84453.1;Name=RJP84453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447174.1;locus_tag=C5O68_01000;product=copper ABC transporter permease;protein_id=RJP84453.1;transl_table=11 PTQV01000003.1 Genbank gene 30904 33546 . - . ID=gene-C5O68_01005;Name=C5O68_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01005 PTQV01000003.1 Protein Homology CDS 30904 33546 . - 0 ID=cds-RJP84454.1;Parent=gene-C5O68_01005;Dbxref=NCBI_GP:RJP84454.1;Name=RJP84454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447175.1;locus_tag=C5O68_01005;product=hypothetical protein;protein_id=RJP84454.1;transl_table=11 PTQV01000003.1 Genbank gene 33674 34216 . + . ID=gene-C5O68_01010;Name=C5O68_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01010 PTQV01000003.1 Protein Homology CDS 33674 34216 . + 0 ID=cds-RJP84455.1;Parent=gene-C5O68_01010;Dbxref=NCBI_GP:RJP84455.1;Name=RJP84455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447176.1;locus_tag=C5O68_01010;product=TetR family transcriptional regulator;protein_id=RJP84455.1;transl_table=11 PTQV01000003.1 Genbank gene 34257 34330 . - . ID=gene-C5O68_01015;Name=C5O68_01015;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_01015 PTQV01000003.1 tRNAscan-SE tRNA 34257 34330 . - . ID=rna-C5O68_01015;Parent=gene-C5O68_01015;anticodon=(pos:complement(34294..34296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01015;product=tRNA-Asn PTQV01000003.1 tRNAscan-SE exon 34257 34330 . - . ID=exon-C5O68_01015-1;Parent=rna-C5O68_01015;anticodon=(pos:complement(34294..34296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01015;product=tRNA-Asn PTQV01000003.1 Genbank gene 34336 34407 . - . ID=gene-C5O68_01020;Name=C5O68_01020;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_01020 PTQV01000003.1 tRNAscan-SE tRNA 34336 34407 . - . ID=rna-C5O68_01020;Parent=gene-C5O68_01020;anticodon=(pos:complement(34372..34374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01020;product=tRNA-Glu PTQV01000003.1 tRNAscan-SE exon 34336 34407 . - . ID=exon-C5O68_01020-1;Parent=rna-C5O68_01020;anticodon=(pos:complement(34372..34374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01020;product=tRNA-Glu PTQV01000003.1 Genbank gene 34459 35211 . - . ID=gene-C5O68_01025;Name=C5O68_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01025 PTQV01000003.1 Protein Homology CDS 34459 35211 . - 0 ID=cds-RJP84456.1;Parent=gene-C5O68_01025;Dbxref=NCBI_GP:RJP84456.1;Name=RJP84456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359632.1;locus_tag=C5O68_01025;product=DNA-binding response regulator;protein_id=RJP84456.1;transl_table=11 PTQV01000003.1 Genbank gene 35208 36533 . - . ID=gene-C5O68_01030;Name=C5O68_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01030 PTQV01000003.1 Protein Homology CDS 35208 36533 . - 0 ID=cds-RJP84457.1;Parent=gene-C5O68_01030;Dbxref=NCBI_GP:RJP84457.1;Name=RJP84457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359633.1;locus_tag=C5O68_01030;product=histidine kinase;protein_id=RJP84457.1;transl_table=11 PTQV01000003.1 Genbank gene 36554 36679 . - . ID=gene-C5O68_01035;Name=comC;gbkey=Gene;gene=comC;gene_biotype=protein_coding;locus_tag=C5O68_01035 PTQV01000003.1 Protein Homology CDS 36554 36679 . - 0 ID=cds-RJP84458.1;Parent=gene-C5O68_01035;Dbxref=NCBI_GP:RJP84458.1;Name=RJP84458.1;gbkey=CDS;gene=comC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359634.1;locus_tag=C5O68_01035;product=competence-stimulating peptide ComC;protein_id=RJP84458.1;transl_table=11 PTQV01000003.1 Genbank gene 36844 36917 . - . ID=gene-C5O68_01040;Name=C5O68_01040;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_01040 PTQV01000003.1 tRNAscan-SE tRNA 36844 36917 . - . ID=rna-C5O68_01040;Parent=gene-C5O68_01040;anticodon=(pos:complement(36881..36883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01040;product=tRNA-Arg PTQV01000003.1 tRNAscan-SE exon 36844 36917 . - . ID=exon-C5O68_01040-1;Parent=rna-C5O68_01040;anticodon=(pos:complement(36881..36883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_01040;product=tRNA-Arg PTQV01000003.1 Genbank gene 36958 37437 . - . ID=gene-C5O68_01045;Name=C5O68_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01045 PTQV01000003.1 Protein Homology CDS 36958 37437 . - 0 ID=cds-RJP84459.1;Parent=gene-C5O68_01045;Dbxref=NCBI_GP:RJP84459.1;Name=RJP84459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359635.1;locus_tag=C5O68_01045;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=RJP84459.1;transl_table=11 PTQV01000003.1 Genbank gene 37608 38801 . + . ID=gene-C5O68_01050;Name=C5O68_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01050 PTQV01000003.1 Protein Homology CDS 37608 38801 . + 0 ID=cds-RJP84460.1;Parent=gene-C5O68_01050;Dbxref=NCBI_GP:RJP84460.1;Name=RJP84460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359636.1;locus_tag=C5O68_01050;product=serine protease;protein_id=RJP84460.1;transl_table=11 PTQV01000003.1 Genbank gene 38859 39617 . + . ID=gene-C5O68_01055;Name=C5O68_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01055 PTQV01000003.1 Protein Homology CDS 38859 39617 . + 0 ID=cds-RJP84461.1;Parent=gene-C5O68_01055;Dbxref=NCBI_GP:RJP84461.1;Name=RJP84461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359637.1;locus_tag=C5O68_01055;product=chromosome partitioning protein ParB;protein_id=RJP84461.1;transl_table=11 PTQV01000003.1 Genbank gene 39830 41191 . + . ID=gene-C5O68_01060;Name=C5O68_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01060 PTQV01000003.1 Protein Homology CDS 39830 41191 . + 0 ID=cds-RJP84462.1;Parent=gene-C5O68_01060;Dbxref=NCBI_GP:RJP84462.1;Name=RJP84462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357595.1;locus_tag=C5O68_01060;product=chromosomal replication initiator protein DnaA;protein_id=RJP84462.1;transl_table=11 PTQV01000003.1 Genbank gene 41350 42486 . + . ID=gene-C5O68_01065;Name=C5O68_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01065 PTQV01000003.1 Protein Homology CDS 41350 42486 . + 0 ID=cds-RJP84463.1;Parent=gene-C5O68_01065;Dbxref=NCBI_GP:RJP84463.1;Name=RJP84463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357596.1;locus_tag=C5O68_01065;product=DNA polymerase III subunit beta;protein_id=RJP84463.1;transl_table=11 PTQV01000003.1 Genbank gene 42551 42745 . + . ID=gene-C5O68_01070;Name=C5O68_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01070 PTQV01000003.1 Protein Homology CDS 42551 42745 . + 0 ID=cds-RJP84464.1;Parent=gene-C5O68_01070;Dbxref=NCBI_GP:RJP84464.1;Name=RJP84464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357597.1;locus_tag=C5O68_01070;product=DUF951 domain-containing protein;protein_id=RJP84464.1;transl_table=11 PTQV01000003.1 Genbank gene 43386 43778 . - . ID=gene-C5O68_01075;Name=C5O68_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01075 PTQV01000003.1 Protein Homology CDS 43386 43778 . - 0 ID=cds-RJP84465.1;Parent=gene-C5O68_01075;Dbxref=NCBI_GP:RJP84465.1;Name=RJP84465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447096.1;locus_tag=C5O68_01075;product=transcriptional regulator;protein_id=RJP84465.1;transl_table=11 PTQV01000003.1 Genbank gene 43934 44344 . - . ID=gene-C5O68_01080;Name=C5O68_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01080 PTQV01000003.1 Protein Homology CDS 43934 44344 . - 0 ID=cds-RJP84466.1;Parent=gene-C5O68_01080;Dbxref=NCBI_GP:RJP84466.1;Name=RJP84466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000187312.1;locus_tag=C5O68_01080;product=DUF1492 domain-containing protein;protein_id=RJP84466.1;transl_table=11 PTQV01000003.1 Genbank gene 44356 44592 . - . ID=gene-C5O68_01085;Name=C5O68_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01085 PTQV01000003.1 Protein Homology CDS 44356 44592 . - 0 ID=cds-RJP84467.1;Parent=gene-C5O68_01085;Dbxref=NCBI_GP:RJP84467.1;Name=RJP84467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000337779.1;locus_tag=C5O68_01085;product=hypothetical protein;protein_id=RJP84467.1;transl_table=11 PTQV01000003.1 Genbank gene 44996 45499 . - . ID=gene-C5O68_01090;Name=C5O68_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01090 PTQV01000003.1 Protein Homology CDS 44996 45499 . - 0 ID=cds-RJP84468.1;Parent=gene-C5O68_01090;Dbxref=NCBI_GP:RJP84468.1;Name=RJP84468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447098.1;locus_tag=C5O68_01090;product=hypothetical protein;protein_id=RJP84468.1;transl_table=11 PTQV01000003.1 Genbank gene 45568 46092 . - . ID=gene-C5O68_01095;Name=C5O68_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01095 PTQV01000003.1 Protein Homology CDS 45568 46092 . - 0 ID=cds-RJP84469.1;Parent=gene-C5O68_01095;Dbxref=NCBI_GP:RJP84469.1;Name=RJP84469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000173105.1;locus_tag=C5O68_01095;product=hypothetical protein;protein_id=RJP84469.1;transl_table=11 PTQV01000003.1 Genbank gene 46111 46284 . - . ID=gene-C5O68_01100;Name=C5O68_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01100 PTQV01000003.1 Protein Homology CDS 46111 46284 . - 0 ID=cds-RJP84470.1;Parent=gene-C5O68_01100;Dbxref=NCBI_GP:RJP84470.1;Name=RJP84470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694572.1;locus_tag=C5O68_01100;product=DUF2758 domain-containing protein;protein_id=RJP84470.1;transl_table=11 PTQV01000003.1 Genbank gene 46778 47695 . - . ID=gene-C5O68_01105;Name=C5O68_01105;end_range=47695,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01105;partial=true PTQV01000003.1 Protein Homology CDS 46778 47695 . - 0 ID=cds-RJP84471.1;Parent=gene-C5O68_01105;Dbxref=NCBI_GP:RJP84471.1;Name=RJP84471.1;end_range=47695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838178.1;locus_tag=C5O68_01105;partial=true;product=DNA primase;protein_id=RJP84471.1;transl_table=11 ##sequence-region PTQV01000040.1 1 1536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000040.1 Genbank region 1 1536 . + . ID=PTQV01000040.1:1..1536;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000040.1 Genbank gene 185 487 . + . ID=gene-C5O68_07420;Name=C5O68_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07420 PTQV01000040.1 Protein Homology CDS 185 487 . + 0 ID=cds-RJP81387.1;Parent=gene-C5O68_07420;Dbxref=NCBI_GP:RJP81387.1;Name=RJP81387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017255.1;locus_tag=C5O68_07420;product=maturase;protein_id=RJP81387.1;transl_table=11 PTQV01000040.1 Genbank gene 459 866 . + . ID=gene-C5O68_07425;Name=C5O68_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07425 PTQV01000040.1 Protein Homology CDS 459 866 . + 0 ID=cds-RJP81388.1;Parent=gene-C5O68_07425;Dbxref=NCBI_GP:RJP81388.1;Name=RJP81388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398343.1;locus_tag=C5O68_07425;product=hypothetical protein;protein_id=RJP81388.1;transl_table=11 PTQV01000040.1 Genbank pseudogene 968 1536 . - . ID=gene-C5O68_07430;Name=C5O68_07430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07430;pseudo=true PTQV01000040.1 Protein Homology CDS 968 1536 . - 2 ID=cds-C5O68_07430;Parent=gene-C5O68_07430;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558057.1;locus_tag=C5O68_07430;product=ISNCY family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000041.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000041.1 Genbank region 1 1043 . + . ID=PTQV01000041.1:1..1043;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000041.1 Genbank pseudogene 181 1043 . + . ID=gene-C5O68_07435;Name=C5O68_07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07435;pseudo=true PTQV01000041.1 Protein Homology CDS 181 1043 . + 0 ID=cds-C5O68_07435;Parent=gene-C5O68_07435;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816617.1;locus_tag=C5O68_07435;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region PTQV01000042.1 1 23992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000042.1 Genbank region 1 23992 . + . ID=PTQV01000042.1:1..23992;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000042.1 Genbank gene 316 1596 . + . ID=gene-C5O68_07440;Name=C5O68_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07440 PTQV01000042.1 Protein Homology CDS 316 1596 . + 0 ID=cds-RJP81300.1;Parent=gene-C5O68_07440;Dbxref=NCBI_GP:RJP81300.1;Name=RJP81300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447095.1;locus_tag=C5O68_07440;product=metal-independent alpha-mannosidase;protein_id=RJP81300.1;transl_table=11 PTQV01000042.1 Genbank gene 1687 4332 . + . ID=gene-C5O68_07445;Name=C5O68_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07445 PTQV01000042.1 Protein Homology CDS 1687 4332 . + 0 ID=cds-RJP81301.1;Parent=gene-C5O68_07445;Dbxref=NCBI_GP:RJP81301.1;Name=RJP81301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447094.1;locus_tag=C5O68_07445;product=alpha-mannosidase;protein_id=RJP81301.1;transl_table=11 PTQV01000042.1 Genbank gene 4404 5285 . + . ID=gene-C5O68_07450;Name=C5O68_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07450 PTQV01000042.1 Protein Homology CDS 4404 5285 . + 0 ID=cds-RJP81315.1;Parent=gene-C5O68_07450;Dbxref=NCBI_GP:RJP81315.1;Name=RJP81315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359541.1;locus_tag=C5O68_07450;product=ROK family protein;protein_id=RJP81315.1;transl_table=11 PTQV01000042.1 Genbank gene 5279 7159 . + . ID=gene-C5O68_07455;Name=C5O68_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07455 PTQV01000042.1 Protein Homology CDS 5279 7159 . + 0 ID=cds-RJP81302.1;Parent=gene-C5O68_07455;Dbxref=NCBI_GP:RJP81302.1;Name=RJP81302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359540.1;locus_tag=C5O68_07455;product=beta-N-acetylhexosaminidase;protein_id=RJP81302.1;transl_table=11 PTQV01000042.1 Genbank gene 7881 8396 . + . ID=gene-C5O68_07460;Name=C5O68_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07460 PTQV01000042.1 Protein Homology CDS 7881 8396 . + 0 ID=cds-RJP81303.1;Parent=gene-C5O68_07460;Dbxref=NCBI_GP:RJP81303.1;Name=RJP81303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837197.1;locus_tag=C5O68_07460;product=hypothetical protein;protein_id=RJP81303.1;transl_table=11 PTQV01000042.1 Genbank gene 8851 9420 . + . ID=gene-C5O68_07465;Name=C5O68_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07465 PTQV01000042.1 Protein Homology CDS 8851 9420 . + 0 ID=cds-RJP81304.1;Parent=gene-C5O68_07465;Dbxref=NCBI_GP:RJP81304.1;Name=RJP81304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509514.1;locus_tag=C5O68_07465;product=hypothetical protein;protein_id=RJP81304.1;transl_table=11 PTQV01000042.1 Genbank gene 9435 9779 . + . ID=gene-C5O68_07470;Name=C5O68_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07470 PTQV01000042.1 Protein Homology CDS 9435 9779 . + 0 ID=cds-RJP81305.1;Parent=gene-C5O68_07470;Dbxref=NCBI_GP:RJP81305.1;Name=RJP81305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003002962.1;locus_tag=C5O68_07470;product=hypothetical protein;protein_id=RJP81305.1;transl_table=11 PTQV01000042.1 Genbank gene 9779 10213 . + . ID=gene-C5O68_07475;Name=C5O68_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07475 PTQV01000042.1 Protein Homology CDS 9779 10213 . + 0 ID=cds-RJP81306.1;Parent=gene-C5O68_07475;Dbxref=NCBI_GP:RJP81306.1;Name=RJP81306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096818.1;locus_tag=C5O68_07475;product=preprotein translocase subunit SecB;protein_id=RJP81306.1;transl_table=11 PTQV01000042.1 Genbank pseudogene 10779 10913 . + . ID=gene-C5O68_07480;Name=C5O68_07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07480;pseudo=true PTQV01000042.1 Protein Homology CDS 10779 10913 . + 0 ID=cds-C5O68_07480;Parent=gene-C5O68_07480;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006731115.1;locus_tag=C5O68_07480;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000042.1 Genbank pseudogene 13527 13709 . + . ID=gene-C5O68_07485;Name=C5O68_07485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07485;pseudo=true PTQV01000042.1 Protein Homology CDS 13527 13709 . + 0 ID=cds-C5O68_07485;Parent=gene-C5O68_07485;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357674.1;locus_tag=C5O68_07485;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000042.1 Genbank gene 14440 15369 . + . ID=gene-C5O68_07490;Name=C5O68_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07490 PTQV01000042.1 Protein Homology CDS 14440 15369 . + 0 ID=cds-RJP81316.1;Parent=gene-C5O68_07490;Dbxref=NCBI_GP:RJP81316.1;Name=RJP81316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447091.1;locus_tag=C5O68_07490;product=sugar ABC transporter permease;protein_id=RJP81316.1;transl_table=11 PTQV01000042.1 Genbank gene 15383 16306 . + . ID=gene-C5O68_07495;Name=C5O68_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07495 PTQV01000042.1 Protein Homology CDS 15383 16306 . + 0 ID=cds-RJP81307.1;Parent=gene-C5O68_07495;Dbxref=NCBI_GP:RJP81307.1;Name=RJP81307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357676.1;locus_tag=C5O68_07495;product=carbohydrate ABC transporter permease;protein_id=RJP81307.1;transl_table=11 PTQV01000042.1 Genbank gene 16561 18036 . + . ID=gene-C5O68_07500;Name=C5O68_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07500 PTQV01000042.1 Protein Homology CDS 16561 18036 . + 0 ID=cds-RJP81308.1;Parent=gene-C5O68_07500;Dbxref=NCBI_GP:RJP81308.1;Name=RJP81308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447089.1;locus_tag=C5O68_07500;product=sugar ABC transporter substrate-binding protein;protein_id=RJP81308.1;transl_table=11 PTQV01000042.1 Genbank gene 18228 18842 . - . ID=gene-C5O68_07505;Name=C5O68_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07505 PTQV01000042.1 Protein Homology CDS 18228 18842 . - 0 ID=cds-RJP81309.1;Parent=gene-C5O68_07505;Dbxref=NCBI_GP:RJP81309.1;Name=RJP81309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130637.1;locus_tag=C5O68_07505;product=multidrug ABC transporter ATP-binding protein;protein_id=RJP81309.1;transl_table=11 PTQV01000042.1 Genbank gene 18845 19672 . - . ID=gene-C5O68_07510;Name=C5O68_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07510 PTQV01000042.1 Protein Homology CDS 18845 19672 . - 0 ID=cds-RJP81310.1;Parent=gene-C5O68_07510;Dbxref=NCBI_GP:RJP81310.1;Name=RJP81310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402862.1;locus_tag=C5O68_07510;product=hypothetical protein;protein_id=RJP81310.1;transl_table=11 PTQV01000042.1 Genbank gene 19677 20498 . - . ID=gene-C5O68_07515;Name=C5O68_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07515 PTQV01000042.1 Protein Homology CDS 19677 20498 . - 0 ID=cds-RJP81311.1;Parent=gene-C5O68_07515;Dbxref=NCBI_GP:RJP81311.1;Name=RJP81311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698614.1;locus_tag=C5O68_07515;product=beta-carotene 15%2C15'-monooxygenase;protein_id=RJP81311.1;transl_table=11 PTQV01000042.1 Genbank gene 20499 21575 . - . ID=gene-C5O68_07520;Name=C5O68_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07520 PTQV01000042.1 Protein Homology CDS 20499 21575 . - 0 ID=cds-RJP81312.1;Parent=gene-C5O68_07520;Dbxref=NCBI_GP:RJP81312.1;Name=RJP81312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760378.1;locus_tag=C5O68_07520;product=hypothetical protein;protein_id=RJP81312.1;transl_table=11 PTQV01000042.1 Genbank gene 21723 22115 . - . ID=gene-C5O68_07525;Name=C5O68_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07525 PTQV01000042.1 Protein Homology CDS 21723 22115 . - 0 ID=cds-RJP81313.1;Parent=gene-C5O68_07525;Dbxref=NCBI_GP:RJP81313.1;Name=RJP81313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183091.1;locus_tag=C5O68_07525;product=hypothetical protein;protein_id=RJP81313.1;transl_table=11 PTQV01000042.1 Genbank pseudogene 22396 22512 . + . ID=gene-C5O68_07530;Name=C5O68_07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07530;pseudo=true PTQV01000042.1 Protein Homology CDS 22396 22512 . + 0 ID=cds-C5O68_07530;Parent=gene-C5O68_07530;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800424.1;locus_tag=C5O68_07530;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 PTQV01000042.1 Genbank gene 22784 23770 . + . ID=gene-C5O68_07535;Name=C5O68_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07535 PTQV01000042.1 Protein Homology CDS 22784 23770 . + 0 ID=cds-RJP81314.1;Parent=gene-C5O68_07535;Dbxref=NCBI_GP:RJP81314.1;Name=RJP81314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357678.1;locus_tag=C5O68_07535;product=rhodanese domain-containing protein;protein_id=RJP81314.1;transl_table=11 ##sequence-region PTQV01000043.1 1 59575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000043.1 Genbank region 1 59575 . + . ID=PTQV01000043.1:1..59575;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000043.1 Genbank gene 1 209 . + . ID=gene-C5O68_07540;Name=C5O68_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07540;partial=true;start_range=.,1 PTQV01000043.1 Protein Homology CDS 1 209 . + 2 ID=cds-RJP81165.1;Parent=gene-C5O68_07540;Dbxref=NCBI_GP:RJP81165.1;Name=RJP81165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_07540;partial=true;product=transposase;protein_id=RJP81165.1;start_range=.,1;transl_table=11 PTQV01000043.1 Genbank gene 416 649 . + . ID=gene-C5O68_07545;Name=C5O68_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07545 PTQV01000043.1 Protein Homology CDS 416 649 . + 0 ID=cds-RJP81166.1;Parent=gene-C5O68_07545;Dbxref=NCBI_GP:RJP81166.1;Name=RJP81166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445522.1;locus_tag=C5O68_07545;product=DUF1858 domain-containing protein;protein_id=RJP81166.1;transl_table=11 PTQV01000043.1 Genbank gene 649 1983 . + . ID=gene-C5O68_07550;Name=C5O68_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07550 PTQV01000043.1 Protein Homology CDS 649 1983 . + 0 ID=cds-RJP81167.1;Parent=gene-C5O68_07550;Dbxref=NCBI_GP:RJP81167.1;Name=RJP81167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445523.1;locus_tag=C5O68_07550;product=DUF438 domain-containing protein;protein_id=RJP81167.1;transl_table=11 PTQV01000043.1 Genbank gene 1994 2248 . + . ID=gene-C5O68_07555;Name=C5O68_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07555 PTQV01000043.1 Protein Homology CDS 1994 2248 . + 0 ID=cds-RJP81168.1;Parent=gene-C5O68_07555;Dbxref=NCBI_GP:RJP81168.1;Name=RJP81168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358081.1;locus_tag=C5O68_07555;product=DUF1912 domain-containing protein;protein_id=RJP81168.1;transl_table=11 PTQV01000043.1 Genbank gene 2344 2739 . + . ID=gene-C5O68_07560;Name=C5O68_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07560 PTQV01000043.1 Protein Homology CDS 2344 2739 . + 0 ID=cds-RJP81169.1;Parent=gene-C5O68_07560;Dbxref=NCBI_GP:RJP81169.1;Name=RJP81169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445525.1;locus_tag=C5O68_07560;product=helicase;protein_id=RJP81169.1;transl_table=11 PTQV01000043.1 Genbank pseudogene 3022 3599 . + . ID=gene-C5O68_07565;Name=C5O68_07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07565;pseudo=true PTQV01000043.1 Protein Homology CDS 3022 3599 . + 0 ID=cds-C5O68_07565;Parent=gene-C5O68_07565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445526.1;locus_tag=C5O68_07565;product=flavin reductase;pseudo=true;transl_table=11 PTQV01000043.1 Genbank gene 3586 4146 . + . ID=gene-C5O68_07570;Name=C5O68_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07570 PTQV01000043.1 Protein Homology CDS 3586 4146 . + 0 ID=cds-RJP81170.1;Parent=gene-C5O68_07570;Dbxref=NCBI_GP:RJP81170.1;Name=RJP81170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445527.1;locus_tag=C5O68_07570;product=N-acetyltransferase;protein_id=RJP81170.1;transl_table=11 PTQV01000043.1 Genbank gene 4146 4724 . + . ID=gene-C5O68_07575;Name=C5O68_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07575 PTQV01000043.1 Protein Homology CDS 4146 4724 . + 0 ID=cds-RJP81171.1;Parent=gene-C5O68_07575;Dbxref=NCBI_GP:RJP81171.1;Name=RJP81171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445528.1;locus_tag=C5O68_07575;product=shikimate kinase;protein_id=RJP81171.1;transl_table=11 PTQV01000043.1 Genbank gene 5021 5218 . + . ID=gene-C5O68_07580;Name=C5O68_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07580 PTQV01000043.1 GeneMarkS+ CDS 5021 5218 . + 0 ID=cds-RJP81172.1;Parent=gene-C5O68_07580;Dbxref=NCBI_GP:RJP81172.1;Name=RJP81172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_07580;product=hypothetical protein;protein_id=RJP81172.1;transl_table=11 PTQV01000043.1 Genbank gene 5410 6636 . + . ID=gene-C5O68_07585;Name=C5O68_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07585 PTQV01000043.1 Protein Homology CDS 5410 6636 . + 0 ID=cds-RJP81199.1;Parent=gene-C5O68_07585;Dbxref=NCBI_GP:RJP81199.1;Name=RJP81199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237271.1;locus_tag=C5O68_07585;product=beta-carotene 15%2C15'-monooxygenase;protein_id=RJP81199.1;transl_table=11 PTQV01000043.1 Genbank gene 6941 8182 . + . ID=gene-C5O68_07590;Name=C5O68_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07590 PTQV01000043.1 Protein Homology CDS 6941 8182 . + 0 ID=cds-RJP81173.1;Parent=gene-C5O68_07590;Dbxref=NCBI_GP:RJP81173.1;Name=RJP81173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085117.1;locus_tag=C5O68_07590;product=hypothetical protein;protein_id=RJP81173.1;transl_table=11 PTQV01000043.1 Genbank gene 8214 9215 . + . ID=gene-C5O68_07595;Name=C5O68_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07595 PTQV01000043.1 Protein Homology CDS 8214 9215 . + 0 ID=cds-RJP81174.1;Parent=gene-C5O68_07595;Dbxref=NCBI_GP:RJP81174.1;Name=RJP81174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147018.1;locus_tag=C5O68_07595;product=cell filamentation protein Fic;protein_id=RJP81174.1;transl_table=11 PTQV01000043.1 Genbank gene 9338 11989 . + . ID=gene-C5O68_07600;Name=C5O68_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07600 PTQV01000043.1 Protein Homology CDS 9338 11989 . + 0 ID=cds-RJP81175.1;Parent=gene-C5O68_07600;Dbxref=NCBI_GP:RJP81175.1;Name=RJP81175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009732359.1;locus_tag=C5O68_07600;product=valine--tRNA ligase;protein_id=RJP81175.1;transl_table=11 PTQV01000043.1 Genbank gene 12096 13439 . + . ID=gene-C5O68_07605;Name=C5O68_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07605 PTQV01000043.1 Protein Homology CDS 12096 13439 . + 0 ID=cds-RJP81176.1;Parent=gene-C5O68_07605;Dbxref=NCBI_GP:RJP81176.1;Name=RJP81176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778677.1;locus_tag=C5O68_07605;product=AAA family ATPase;protein_id=RJP81176.1;transl_table=11 PTQV01000043.1 Genbank gene 13429 13995 . + . ID=gene-C5O68_07610;Name=C5O68_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07610 PTQV01000043.1 Protein Homology CDS 13429 13995 . + 0 ID=cds-RJP81177.1;Parent=gene-C5O68_07610;Dbxref=NCBI_GP:RJP81177.1;Name=RJP81177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253751.1;locus_tag=C5O68_07610;product=hypothetical protein;protein_id=RJP81177.1;transl_table=11 PTQV01000043.1 Genbank gene 14352 15155 . + . ID=gene-C5O68_07615;Name=C5O68_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07615 PTQV01000043.1 Protein Homology CDS 14352 15155 . + 0 ID=cds-RJP81178.1;Parent=gene-C5O68_07615;Dbxref=NCBI_GP:RJP81178.1;Name=RJP81178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358088.1;locus_tag=C5O68_07615;product=cell filamentation protein Fic;protein_id=RJP81178.1;transl_table=11 PTQV01000043.1 Genbank gene 15427 18105 . + . ID=gene-C5O68_07620;Name=C5O68_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07620 PTQV01000043.1 Protein Homology CDS 15427 18105 . + 0 ID=cds-RJP81179.1;Parent=gene-C5O68_07620;Dbxref=NCBI_GP:RJP81179.1;Name=RJP81179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445534.1;locus_tag=C5O68_07620;product=DEAD/DEAH box helicase;protein_id=RJP81179.1;transl_table=11 PTQV01000043.1 Genbank gene 18404 19243 . + . ID=gene-C5O68_07625;Name=C5O68_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07625 PTQV01000043.1 Protein Homology CDS 18404 19243 . + 0 ID=cds-RJP81180.1;Parent=gene-C5O68_07625;Dbxref=NCBI_GP:RJP81180.1;Name=RJP81180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358098.1;locus_tag=C5O68_07625;product=transcription antiterminator BglG;protein_id=RJP81180.1;transl_table=11 PTQV01000043.1 Genbank gene 19261 21099 . + . ID=gene-C5O68_07630;Name=C5O68_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07630 PTQV01000043.1 Protein Homology CDS 19261 21099 . + 0 ID=cds-RJP81181.1;Parent=gene-C5O68_07630;Dbxref=NCBI_GP:RJP81181.1;Name=RJP81181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358099.1;locus_tag=C5O68_07630;product=PTS beta-glucoside transporter subunit EIIBCA;protein_id=RJP81181.1;transl_table=11 PTQV01000043.1 Genbank pseudogene 21112 22527 . + . ID=gene-C5O68_07635;Name=C5O68_07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07635;pseudo=true PTQV01000043.1 Protein Homology CDS 21112 22527 . + 0 ID=cds-C5O68_07635;Parent=gene-C5O68_07635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358100.1;locus_tag=C5O68_07635;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 PTQV01000043.1 Genbank gene 23119 24165 . + . ID=gene-C5O68_07640;Name=C5O68_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07640 PTQV01000043.1 Protein Homology CDS 23119 24165 . + 0 ID=cds-RJP81200.1;Parent=gene-C5O68_07640;Dbxref=NCBI_GP:RJP81200.1;Name=RJP81200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358101.2;locus_tag=C5O68_07640;product=phenylalanine--tRNA ligase subunit alpha;protein_id=RJP81200.1;transl_table=11 PTQV01000043.1 Genbank gene 24165 24674 . + . ID=gene-C5O68_07645;Name=C5O68_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07645 PTQV01000043.1 Protein Homology CDS 24165 24674 . + 0 ID=cds-RJP81182.1;Parent=gene-C5O68_07645;Dbxref=NCBI_GP:RJP81182.1;Name=RJP81182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358102.1;locus_tag=C5O68_07645;product=GNAT family N-acetyltransferase;protein_id=RJP81182.1;transl_table=11 PTQV01000043.1 Genbank gene 24751 27156 . + . ID=gene-C5O68_07650;Name=C5O68_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07650 PTQV01000043.1 Protein Homology CDS 24751 27156 . + 0 ID=cds-RJP81183.1;Parent=gene-C5O68_07650;Dbxref=NCBI_GP:RJP81183.1;Name=RJP81183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446901.1;locus_tag=C5O68_07650;product=phenylalanine--tRNA ligase subunit beta;protein_id=RJP81183.1;transl_table=11 PTQV01000043.1 Genbank gene 27224 28225 . - . ID=gene-C5O68_07655;Name=C5O68_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07655 PTQV01000043.1 Protein Homology CDS 27224 28225 . - 0 ID=cds-RJP81184.1;Parent=gene-C5O68_07655;Dbxref=NCBI_GP:RJP81184.1;Name=RJP81184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358104.1;locus_tag=C5O68_07655;product=endonuclease/exonuclease/phosphatase family protein;protein_id=RJP81184.1;transl_table=11 PTQV01000043.1 Genbank pseudogene 28381 28869 . + . ID=gene-C5O68_07660;Name=C5O68_07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07660;pseudo=true PTQV01000043.1 Protein Homology CDS 28381 28869 . + 0 ID=cds-C5O68_07660;Parent=gene-C5O68_07660;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=C5O68_07660;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000043.1 Genbank gene 28953 29219 . + . ID=gene-C5O68_07665;Name=C5O68_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07665 PTQV01000043.1 Protein Homology CDS 28953 29219 . + 0 ID=cds-RJP81185.1;Parent=gene-C5O68_07665;Dbxref=NCBI_GP:RJP81185.1;Name=RJP81185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358107.1;locus_tag=C5O68_07665;product=XRE family transcriptional regulator;protein_id=RJP81185.1;transl_table=11 PTQV01000043.1 Genbank gene 29587 31836 . + . ID=gene-C5O68_07670;Name=C5O68_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07670 PTQV01000043.1 Protein Homology CDS 29587 31836 . + 0 ID=cds-RJP81186.1;Parent=gene-C5O68_07670;Dbxref=NCBI_GP:RJP81186.1;Name=RJP81186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446702.1;locus_tag=C5O68_07670;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=RJP81186.1;transl_table=11 PTQV01000043.1 Genbank gene 31938 32804 . + . ID=gene-C5O68_07675;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=C5O68_07675 PTQV01000043.1 Protein Homology CDS 31938 32804 . + 0 ID=cds-RJP81201.1;Parent=gene-C5O68_07675;Dbxref=NCBI_GP:RJP81201.1;Name=RJP81201.1;gbkey=CDS;gene=metF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446701.1;locus_tag=C5O68_07675;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=RJP81201.1;transl_table=11 PTQV01000043.1 Genbank pseudogene 33363 33425 . - . ID=gene-C5O68_07680;Name=C5O68_07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07680;pseudo=true PTQV01000043.1 Protein Homology CDS 33363 33425 . - 0 ID=cds-C5O68_07680;Parent=gene-C5O68_07680;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857731.1;locus_tag=C5O68_07680;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;pseudo=true;transl_table=11 PTQV01000043.1 Genbank pseudogene 33437 33622 . - . ID=gene-C5O68_07685;Name=C5O68_07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07685;pseudo=true PTQV01000043.1 Protein Homology CDS 33437 33622 . - 0 ID=cds-C5O68_07685;Parent=gene-C5O68_07685;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811622.1;locus_tag=C5O68_07685;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000043.1 Genbank gene 33642 35855 . + . ID=gene-C5O68_07690;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=C5O68_07690 PTQV01000043.1 Protein Homology CDS 33642 35855 . + 0 ID=cds-RJP81187.1;Parent=gene-C5O68_07690;Dbxref=NCBI_GP:RJP81187.1;Name=RJP81187.1;gbkey=CDS;gene=pnp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446700.1;locus_tag=C5O68_07690;product=polyribonucleotide nucleotidyltransferase;protein_id=RJP81187.1;transl_table=11 PTQV01000043.1 Genbank gene 35871 36488 . + . ID=gene-C5O68_07695;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=C5O68_07695 PTQV01000043.1 Protein Homology CDS 35871 36488 . + 0 ID=cds-RJP81188.1;Parent=gene-C5O68_07695;Dbxref=NCBI_GP:RJP81188.1;Name=RJP81188.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358111.1;locus_tag=C5O68_07695;product=serine O-acetyltransferase;protein_id=RJP81188.1;transl_table=11 PTQV01000043.1 Genbank gene 36500 37384 . + . ID=gene-C5O68_07700;Name=C5O68_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07700 PTQV01000043.1 Protein Homology CDS 36500 37384 . + 0 ID=cds-RJP81189.1;Parent=gene-C5O68_07700;Dbxref=NCBI_GP:RJP81189.1;Name=RJP81189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446698.1;locus_tag=C5O68_07700;product=GNAT family N-acetyltransferase;protein_id=RJP81189.1;transl_table=11 PTQV01000043.1 Genbank gene 37326 37577 . - . ID=gene-C5O68_07705;Name=C5O68_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07705 PTQV01000043.1 Protein Homology CDS 37326 37577 . - 0 ID=cds-RJP81190.1;Parent=gene-C5O68_07705;Dbxref=NCBI_GP:RJP81190.1;Name=RJP81190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001822012.1;locus_tag=C5O68_07705;product=hypothetical protein;protein_id=RJP81190.1;transl_table=11 PTQV01000043.1 Genbank gene 37467 38810 . + . ID=gene-C5O68_07710;Name=C5O68_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07710 PTQV01000043.1 Protein Homology CDS 37467 38810 . + 0 ID=cds-RJP81191.1;Parent=gene-C5O68_07710;Dbxref=NCBI_GP:RJP81191.1;Name=RJP81191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358113.1;locus_tag=C5O68_07710;product=cysteine--tRNA ligase;protein_id=RJP81191.1;transl_table=11 PTQV01000043.1 Genbank gene 38803 39189 . + . ID=gene-C5O68_07715;Name=C5O68_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07715 PTQV01000043.1 Protein Homology CDS 38803 39189 . + 0 ID=cds-RJP81192.1;Parent=gene-C5O68_07715;Dbxref=NCBI_GP:RJP81192.1;Name=RJP81192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446696.1;locus_tag=C5O68_07715;product=Mini-ribonuclease 3;protein_id=RJP81192.1;transl_table=11 PTQV01000043.1 Genbank gene 39193 40077 . + . ID=gene-C5O68_07720;Name=C5O68_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07720 PTQV01000043.1 Protein Homology CDS 39193 40077 . + 0 ID=cds-RJP81193.1;Parent=gene-C5O68_07720;Dbxref=NCBI_GP:RJP81193.1;Name=RJP81193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358115.1;locus_tag=C5O68_07720;product=PucR family transcriptional regulator;protein_id=RJP81193.1;transl_table=11 PTQV01000043.1 Genbank gene 40887 41822 . + . ID=gene-C5O68_07725;Name=C5O68_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07725 PTQV01000043.1 Protein Homology CDS 40887 41822 . + 0 ID=cds-RJP81194.1;Parent=gene-C5O68_07725;Dbxref=NCBI_GP:RJP81194.1;Name=RJP81194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445715.1;locus_tag=C5O68_07725;product=hypothetical protein;protein_id=RJP81194.1;transl_table=11 PTQV01000043.1 Genbank gene 42226 42891 . + . ID=gene-C5O68_07730;Name=C5O68_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07730 PTQV01000043.1 Protein Homology CDS 42226 42891 . + 0 ID=cds-RJP81195.1;Parent=gene-C5O68_07730;Dbxref=NCBI_GP:RJP81195.1;Name=RJP81195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473604.1;locus_tag=C5O68_07730;product=hypothetical protein;protein_id=RJP81195.1;transl_table=11 PTQV01000043.1 Genbank pseudogene 43517 43702 . + . ID=gene-C5O68_07735;Name=C5O68_07735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07735;pseudo=true PTQV01000043.1 Protein Homology CDS 43517 43702 . + 0 ID=cds-C5O68_07735;Parent=gene-C5O68_07735;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445925.1;locus_tag=C5O68_07735;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000043.1 Genbank pseudogene 47381 54736 . + . ID=gene-C5O68_07740;Name=C5O68_07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07740;pseudo=true PTQV01000043.1 Protein Homology CDS 47381 54736 . + 0 ID=cds-C5O68_07740;Parent=gene-C5O68_07740;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=C5O68_07740;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000043.1 Genbank gene 55013 55579 . + . ID=gene-C5O68_07745;Name=C5O68_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07745 PTQV01000043.1 Protein Homology CDS 55013 55579 . + 0 ID=cds-RJP81202.1;Parent=gene-C5O68_07745;Dbxref=NCBI_GP:RJP81202.1;Name=RJP81202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=C5O68_07745;product=hypothetical protein;protein_id=RJP81202.1;transl_table=11 PTQV01000043.1 Genbank gene 55729 57006 . + . ID=gene-C5O68_07750;Name=C5O68_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07750 PTQV01000043.1 Protein Homology CDS 55729 57006 . + 0 ID=cds-RJP81196.1;Parent=gene-C5O68_07750;Dbxref=NCBI_GP:RJP81196.1;Name=RJP81196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358118.1;locus_tag=C5O68_07750;product=peptide ABC transporter permease;protein_id=RJP81196.1;transl_table=11 PTQV01000043.1 Genbank gene 57134 57766 . + . ID=gene-C5O68_07755;Name=C5O68_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07755 PTQV01000043.1 Protein Homology CDS 57134 57766 . + 0 ID=cds-RJP81197.1;Parent=gene-C5O68_07755;Dbxref=NCBI_GP:RJP81197.1;Name=RJP81197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445807.1;locus_tag=C5O68_07755;product=ABC transporter ATP-binding protein;protein_id=RJP81197.1;transl_table=11 PTQV01000043.1 Genbank gene 58052 59431 . + . ID=gene-C5O68_07760;Name=C5O68_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07760 PTQV01000043.1 Protein Homology CDS 58052 59431 . + 0 ID=cds-RJP81198.1;Parent=gene-C5O68_07760;Dbxref=NCBI_GP:RJP81198.1;Name=RJP81198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358120.1;locus_tag=C5O68_07760;product=ABC transporter permease;protein_id=RJP81198.1;transl_table=11 ##sequence-region PTQV01000044.1 1 18915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000044.1 Genbank region 1 18915 . + . ID=PTQV01000044.1:1..18915;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000044.1 Genbank gene 633 1322 . - . ID=gene-C5O68_07765;Name=C5O68_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07765 PTQV01000044.1 Protein Homology CDS 633 1322 . - 0 ID=cds-RJP81124.1;Parent=gene-C5O68_07765;Dbxref=NCBI_GP:RJP81124.1;Name=RJP81124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145049.1;locus_tag=C5O68_07765;product=50S ribosomal protein L1;protein_id=RJP81124.1;transl_table=11 PTQV01000044.1 Genbank gene 1530 1955 . - . ID=gene-C5O68_07770;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=C5O68_07770 PTQV01000044.1 Protein Homology CDS 1530 1955 . - 0 ID=cds-RJP81125.1;Parent=gene-C5O68_07770;Dbxref=NCBI_GP:RJP81125.1;Name=RJP81125.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358149.1;locus_tag=C5O68_07770;product=50S ribosomal protein L11;protein_id=RJP81125.1;transl_table=11 PTQV01000044.1 Genbank gene 2264 2980 . - . ID=gene-C5O68_07775;Name=C5O68_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07775 PTQV01000044.1 Protein Homology CDS 2264 2980 . - 0 ID=cds-RJP81126.1;Parent=gene-C5O68_07775;Dbxref=NCBI_GP:RJP81126.1;Name=RJP81126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358148.1;locus_tag=C5O68_07775;product=D-alanyl-D-alanine carboxypeptidase;protein_id=RJP81126.1;transl_table=11 PTQV01000044.1 Genbank gene 2983 3453 . - . ID=gene-C5O68_07780;Name=C5O68_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07780 PTQV01000044.1 Protein Homology CDS 2983 3453 . - 0 ID=cds-RJP81127.1;Parent=gene-C5O68_07780;Dbxref=NCBI_GP:RJP81127.1;Name=RJP81127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446674.1;locus_tag=C5O68_07780;product=HIT family protein;protein_id=RJP81127.1;transl_table=11 PTQV01000044.1 Genbank gene 3455 4492 . - . ID=gene-C5O68_07785;Name=C5O68_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07785 PTQV01000044.1 Protein Homology CDS 3455 4492 . - 0 ID=cds-RJP81128.1;Parent=gene-C5O68_07785;Dbxref=NCBI_GP:RJP81128.1;Name=RJP81128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358146.1;locus_tag=C5O68_07785;product=peptidase M42;protein_id=RJP81128.1;transl_table=11 PTQV01000044.1 Genbank gene 4590 5930 . - . ID=gene-C5O68_07790;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=C5O68_07790 PTQV01000044.1 Protein Homology CDS 4590 5930 . - 0 ID=cds-RJP81129.1;Parent=gene-C5O68_07790;Dbxref=NCBI_GP:RJP81129.1;Name=RJP81129.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358145.1;locus_tag=C5O68_07790;product=branched-chain amino acid transport system II carrier protein;protein_id=RJP81129.1;transl_table=11 PTQV01000044.1 Genbank gene 6086 6205 . - . ID=gene-C5O68_07795;Name=C5O68_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07795 PTQV01000044.1 Protein Homology CDS 6086 6205 . - 0 ID=cds-RJP81130.1;Parent=gene-C5O68_07795;Dbxref=NCBI_GP:RJP81130.1;Name=RJP81130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001816288.1;locus_tag=C5O68_07795;product=rhodanese-like domain-containing protein;protein_id=RJP81130.1;transl_table=11 PTQV01000044.1 Genbank gene 6221 6373 . - . ID=gene-C5O68_07800;Name=C5O68_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07800 PTQV01000044.1 Protein Homology CDS 6221 6373 . - 0 ID=cds-RJP81131.1;Parent=gene-C5O68_07800;Dbxref=NCBI_GP:RJP81131.1;Name=RJP81131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658235.1;locus_tag=C5O68_07800;product=rhodanese-like domain-containing protein;protein_id=RJP81131.1;transl_table=11 PTQV01000044.1 Genbank gene 6532 7110 . - . ID=gene-C5O68_07805;Name=C5O68_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07805 PTQV01000044.1 Protein Homology CDS 6532 7110 . - 0 ID=cds-RJP81132.1;Parent=gene-C5O68_07805;Dbxref=NCBI_GP:RJP81132.1;Name=RJP81132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358142.1;locus_tag=C5O68_07805;product=uracil-DNA glycosylase;protein_id=RJP81132.1;transl_table=11 PTQV01000044.1 Genbank gene 7164 8564 . - . ID=gene-C5O68_07810;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=C5O68_07810 PTQV01000044.1 Protein Homology CDS 7164 8564 . - 0 ID=cds-RJP81133.1;Parent=gene-C5O68_07810;Dbxref=NCBI_GP:RJP81133.1;Name=RJP81133.1;gbkey=CDS;gene=pepV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358141.1;locus_tag=C5O68_07810;product=dipeptidase PepV;protein_id=RJP81133.1;transl_table=11 PTQV01000044.1 Genbank gene 8577 9182 . - . ID=gene-C5O68_07815;Name=C5O68_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07815 PTQV01000044.1 Protein Homology CDS 8577 9182 . - 0 ID=cds-RJP81134.1;Parent=gene-C5O68_07815;Dbxref=NCBI_GP:RJP81134.1;Name=RJP81134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358140.1;locus_tag=C5O68_07815;product=nitroreductase family protein;protein_id=RJP81134.1;transl_table=11 PTQV01000044.1 Genbank gene 9353 10153 . + . ID=gene-C5O68_07820;Name=C5O68_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07820 PTQV01000044.1 Protein Homology CDS 9353 10153 . + 0 ID=cds-RJP81135.1;Parent=gene-C5O68_07820;Dbxref=NCBI_GP:RJP81135.1;Name=RJP81135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446681.1;locus_tag=C5O68_07820;product=amino acid ABC transporter substrate-binding protein;protein_id=RJP81135.1;transl_table=11 PTQV01000044.1 Genbank gene 10219 11052 . - . ID=gene-C5O68_07825;Name=C5O68_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07825 PTQV01000044.1 Protein Homology CDS 10219 11052 . - 0 ID=cds-RJP81136.1;Parent=gene-C5O68_07825;Dbxref=NCBI_GP:RJP81136.1;Name=RJP81136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446682.1;locus_tag=C5O68_07825;product=metallophosphatase family protein;protein_id=RJP81136.1;transl_table=11 PTQV01000044.1 Genbank gene 11042 12889 . - . ID=gene-C5O68_07830;Name=C5O68_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07830 PTQV01000044.1 Protein Homology CDS 11042 12889 . - 0 ID=cds-RJP81137.1;Parent=gene-C5O68_07830;Dbxref=NCBI_GP:RJP81137.1;Name=RJP81137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446683.1;locus_tag=C5O68_07830;product=excinuclease ABC subunit C;protein_id=RJP81137.1;transl_table=11 PTQV01000044.1 Genbank gene 12928 13629 . - . ID=gene-C5O68_07835;Name=C5O68_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07835 PTQV01000044.1 Protein Homology CDS 12928 13629 . - 0 ID=cds-RJP81138.1;Parent=gene-C5O68_07835;Dbxref=NCBI_GP:RJP81138.1;Name=RJP81138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446684.1;locus_tag=C5O68_07835;product=peptidase;protein_id=RJP81138.1;transl_table=11 PTQV01000044.1 Genbank gene 13708 14940 . - . ID=gene-C5O68_07840;Name=murN;gbkey=Gene;gene=murN;gene_biotype=protein_coding;locus_tag=C5O68_07840 PTQV01000044.1 Protein Homology CDS 13708 14940 . - 0 ID=cds-RJP81139.1;Parent=gene-C5O68_07840;Dbxref=NCBI_GP:RJP81139.1;Name=RJP81139.1;gbkey=CDS;gene=murN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358135.1;locus_tag=C5O68_07840;product=peptidoglycan bridge formation alanyltransferase MurN;protein_id=RJP81139.1;transl_table=11 PTQV01000044.1 Genbank gene 14945 16165 . - . ID=gene-C5O68_07845;Name=C5O68_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07845 PTQV01000044.1 Protein Homology CDS 14945 16165 . - 0 ID=cds-RJP81140.1;Parent=gene-C5O68_07845;Dbxref=NCBI_GP:RJP81140.1;Name=RJP81140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358134.1;locus_tag=C5O68_07845;product=UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase;protein_id=RJP81140.1;transl_table=11 PTQV01000044.1 Genbank gene 16277 17056 . - . ID=gene-C5O68_07850;Name=C5O68_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07850 PTQV01000044.1 Protein Homology CDS 16277 17056 . - 0 ID=cds-RJP81141.1;Parent=gene-C5O68_07850;Dbxref=NCBI_GP:RJP81141.1;Name=RJP81141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358133.1;locus_tag=C5O68_07850;product=esterase family protein;protein_id=RJP81141.1;transl_table=11 PTQV01000044.1 Genbank gene 17125 18786 . - . ID=gene-C5O68_07855;Name=C5O68_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07855 PTQV01000044.1 Protein Homology CDS 17125 18786 . - 0 ID=cds-RJP81142.1;Parent=gene-C5O68_07855;Dbxref=NCBI_GP:RJP81142.1;Name=RJP81142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446688.1;locus_tag=C5O68_07855;product=ribonuclease J;protein_id=RJP81142.1;transl_table=11 ##sequence-region PTQV01000045.1 1 13699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000045.1 Genbank region 1 13699 . + . ID=PTQV01000045.1:1..13699;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000045.1 Genbank gene 1 2537 . - . ID=gene-C5O68_07860;Name=C5O68_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07860;partial=true;start_range=.,1 PTQV01000045.1 Protein Homology CDS 1 2537 . - 0 ID=cds-RJP81021.1;Parent=gene-C5O68_07860;Dbxref=NCBI_GP:RJP81021.1;Name=RJP81021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02331;locus_tag=C5O68_07860;partial=true;product=hypothetical protein;protein_id=RJP81021.1;start_range=.,1;transl_table=11 PTQV01000045.1 Genbank gene 2553 3479 . - . ID=gene-C5O68_07865;Name=C5O68_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07865 PTQV01000045.1 Protein Homology CDS 2553 3479 . - 0 ID=cds-RJP81022.1;Parent=gene-C5O68_07865;Dbxref=NCBI_GP:RJP81022.1;Name=RJP81022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399288.1;locus_tag=C5O68_07865;product=hypothetical protein;protein_id=RJP81022.1;transl_table=11 PTQV01000045.1 Genbank gene 4064 4198 . - . ID=gene-C5O68_07870;Name=C5O68_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07870 PTQV01000045.1 Protein Homology CDS 4064 4198 . - 0 ID=cds-RJP81023.1;Parent=gene-C5O68_07870;Dbxref=NCBI_GP:RJP81023.1;Name=RJP81023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831903.1;locus_tag=C5O68_07870;product=50S ribosomal protein L34;protein_id=RJP81023.1;transl_table=11 PTQV01000045.1 Genbank gene 4343 5557 . - . ID=gene-C5O68_07875;Name=C5O68_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07875 PTQV01000045.1 Protein Homology CDS 4343 5557 . - 0 ID=cds-RJP81024.1;Parent=gene-C5O68_07875;Dbxref=NCBI_GP:RJP81024.1;Name=RJP81024.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445429.1;locus_tag=C5O68_07875;product=aminotransferase;protein_id=RJP81024.1;transl_table=11 PTQV01000045.1 Genbank gene 5701 6258 . - . ID=gene-C5O68_07880;Name=C5O68_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07880 PTQV01000045.1 Protein Homology CDS 5701 6258 . - 0 ID=cds-RJP81025.1;Parent=gene-C5O68_07880;Dbxref=NCBI_GP:RJP81025.1;Name=RJP81025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001203814.1;locus_tag=C5O68_07880;product=hypothetical protein;protein_id=RJP81025.1;transl_table=11 PTQV01000045.1 Genbank gene 6279 6578 . - . ID=gene-C5O68_07885;Name=C5O68_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07885 PTQV01000045.1 Protein Homology CDS 6279 6578 . - 0 ID=cds-RJP81026.1;Parent=gene-C5O68_07885;Dbxref=NCBI_GP:RJP81026.1;Name=RJP81026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445428.1;locus_tag=C5O68_07885;product=hypothetical protein;protein_id=RJP81026.1;transl_table=11 PTQV01000045.1 Genbank gene 6750 7202 . + . ID=gene-C5O68_07890;Name=C5O68_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07890 PTQV01000045.1 Protein Homology CDS 6750 7202 . + 0 ID=cds-RJP81027.1;Parent=gene-C5O68_07890;Dbxref=NCBI_GP:RJP81027.1;Name=RJP81027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445427.1;locus_tag=C5O68_07890;product=universal stress protein;protein_id=RJP81027.1;transl_table=11 PTQV01000045.1 Genbank pseudogene 7240 7433 . - . ID=gene-C5O68_07895;Name=C5O68_07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07895;pseudo=true PTQV01000045.1 Protein Homology CDS 7240 7433 . - 0 ID=cds-C5O68_07895;Parent=gene-C5O68_07895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_07895;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000045.1 Genbank gene 7430 8821 . - . ID=gene-C5O68_07900;Name=C5O68_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07900 PTQV01000045.1 Protein Homology CDS 7430 8821 . - 0 ID=cds-RJP81028.1;Parent=gene-C5O68_07900;Dbxref=NCBI_GP:RJP81028.1;Name=RJP81028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445426.1;locus_tag=C5O68_07900;product=alanine aminotransferase;protein_id=RJP81028.1;transl_table=11 PTQV01000045.1 Genbank gene 8887 9849 . + . ID=gene-C5O68_07905;Name=C5O68_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07905 PTQV01000045.1 Protein Homology CDS 8887 9849 . + 0 ID=cds-RJP81029.1;Parent=gene-C5O68_07905;Dbxref=NCBI_GP:RJP81029.1;Name=RJP81029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359404.1;locus_tag=C5O68_07905;product=L-asparaginase;protein_id=RJP81029.1;transl_table=11 PTQV01000045.1 Genbank gene 10019 11029 . - . ID=gene-C5O68_07910;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=C5O68_07910 PTQV01000045.1 Protein Homology CDS 10019 11029 . - 0 ID=cds-RJP81030.1;Parent=gene-C5O68_07910;Dbxref=NCBI_GP:RJP81030.1;Name=RJP81030.1;gbkey=CDS;gene=ccpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445424.1;locus_tag=C5O68_07910;product=catabolite control protein A;protein_id=RJP81030.1;transl_table=11 PTQV01000045.1 Genbank gene 11347 11946 . - . ID=gene-C5O68_07915;Name=C5O68_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07915 PTQV01000045.1 Protein Homology CDS 11347 11946 . - 0 ID=cds-RJP81031.1;Parent=gene-C5O68_07915;Dbxref=NCBI_GP:RJP81031.1;Name=RJP81031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445399.1;locus_tag=C5O68_07915;product=DNA-binding response regulator;protein_id=RJP81031.1;transl_table=11 PTQV01000045.1 Genbank gene 11947 13044 . - . ID=gene-C5O68_07920;Name=C5O68_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07920 PTQV01000045.1 Protein Homology CDS 11947 13044 . - 0 ID=cds-RJP81032.1;Parent=gene-C5O68_07920;Dbxref=NCBI_GP:RJP81032.1;Name=RJP81032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001848091.1;locus_tag=C5O68_07920;product=sensor histidine kinase;protein_id=RJP81032.1;transl_table=11 PTQV01000045.1 Genbank gene 13044 13699 . - . ID=gene-C5O68_07925;Name=C5O68_07925;end_range=13699,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07925;partial=true PTQV01000045.1 Protein Homology CDS 13044 13699 . - 2 ID=cds-RJP81033.1;Parent=gene-C5O68_07925;Dbxref=NCBI_GP:RJP81033.1;Name=RJP81033.1;end_range=13699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445397.1;locus_tag=C5O68_07925;partial=true;product=ABC transporter permease;protein_id=RJP81033.1;transl_table=11 ##sequence-region PTQV01000046.1 1 46583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000046.1 Genbank region 1 46583 . + . ID=PTQV01000046.1:1..46583;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000046.1 Genbank gene 303 521 . + . ID=gene-C5O68_07930;Name=C5O68_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07930 PTQV01000046.1 Protein Homology CDS 303 521 . + 0 ID=cds-RJP80944.1;Parent=gene-C5O68_07930;Dbxref=NCBI_GP:RJP80944.1;Name=RJP80944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358527.1;locus_tag=C5O68_07930;product=transcriptional regulator;protein_id=RJP80944.1;transl_table=11 PTQV01000046.1 Genbank pseudogene 525 793 . + . ID=gene-C5O68_07935;Name=C5O68_07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07935;pseudo=true PTQV01000046.1 Protein Homology CDS 525 793 . + 0 ID=cds-C5O68_07935;Parent=gene-C5O68_07935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175447.1;locus_tag=C5O68_07935;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000046.1 Genbank gene 914 1939 . + . ID=gene-C5O68_07940;Name=C5O68_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07940 PTQV01000046.1 Protein Homology CDS 914 1939 . + 0 ID=cds-RJP80945.1;Parent=gene-C5O68_07940;Dbxref=NCBI_GP:RJP80945.1;Name=RJP80945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358528.1;locus_tag=C5O68_07940;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RJP80945.1;transl_table=11 PTQV01000046.1 Genbank gene 1917 2936 . + . ID=gene-C5O68_07945;Name=C5O68_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07945 PTQV01000046.1 Protein Homology CDS 1917 2936 . + 0 ID=cds-RJP80946.1;Parent=gene-C5O68_07945;Dbxref=NCBI_GP:RJP80946.1;Name=RJP80946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358529.1;locus_tag=C5O68_07945;product=iron ABC transporter permease;protein_id=RJP80946.1;transl_table=11 PTQV01000046.1 Genbank gene 2936 3943 . + . ID=gene-C5O68_07950;Name=C5O68_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07950 PTQV01000046.1 Protein Homology CDS 2936 3943 . + 0 ID=cds-RJP80947.1;Parent=gene-C5O68_07950;Dbxref=NCBI_GP:RJP80947.1;Name=RJP80947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358530.1;locus_tag=C5O68_07950;product=iron ABC transporter permease;protein_id=RJP80947.1;transl_table=11 PTQV01000046.1 Genbank gene 3943 4737 . + . ID=gene-C5O68_07955;Name=C5O68_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07955 PTQV01000046.1 Protein Homology CDS 3943 4737 . + 0 ID=cds-RJP80948.1;Parent=gene-C5O68_07955;Dbxref=NCBI_GP:RJP80948.1;Name=RJP80948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358532.1;locus_tag=C5O68_07955;product=ABC transporter ATP-binding protein;protein_id=RJP80948.1;transl_table=11 PTQV01000046.1 Genbank gene 5125 5514 . + . ID=gene-C5O68_07960;Name=C5O68_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07960 PTQV01000046.1 Protein Homology CDS 5125 5514 . + 0 ID=cds-RJP80949.1;Parent=gene-C5O68_07960;Dbxref=NCBI_GP:RJP80949.1;Name=RJP80949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358533.1;locus_tag=C5O68_07960;product=hypothetical protein;protein_id=RJP80949.1;transl_table=11 PTQV01000046.1 Genbank gene 5639 5794 . + . ID=gene-C5O68_07965;Name=C5O68_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07965 PTQV01000046.1 Protein Homology CDS 5639 5794 . + 0 ID=cds-RJP80950.1;Parent=gene-C5O68_07965;Dbxref=NCBI_GP:RJP80950.1;Name=RJP80950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358534.1;locus_tag=C5O68_07965;product=hypothetical protein;protein_id=RJP80950.1;transl_table=11 PTQV01000046.1 Genbank gene 6478 6639 . + . ID=gene-C5O68_07970;Name=C5O68_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07970 PTQV01000046.1 Protein Homology CDS 6478 6639 . + 0 ID=cds-RJP80951.1;Parent=gene-C5O68_07970;Dbxref=NCBI_GP:RJP80951.1;Name=RJP80951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358535.1;locus_tag=C5O68_07970;product=hypothetical protein;protein_id=RJP80951.1;transl_table=11 PTQV01000046.1 Genbank pseudogene 6731 8409 . + . ID=gene-C5O68_07975;Name=C5O68_07975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_07975;pseudo=true PTQV01000046.1 Protein Homology CDS 6731 8409 . + 0 ID=cds-C5O68_07975;Parent=gene-C5O68_07975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358536.1;locus_tag=C5O68_07975;product=recombinase family protein;pseudo=true;transl_table=11 PTQV01000046.1 Genbank gene 8677 9243 . + . ID=gene-C5O68_07980;Name=C5O68_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07980 PTQV01000046.1 Protein Homology CDS 8677 9243 . + 0 ID=cds-RJP80952.1;Parent=gene-C5O68_07980;Dbxref=NCBI_GP:RJP80952.1;Name=RJP80952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446230.1;locus_tag=C5O68_07980;product=hypothetical protein;protein_id=RJP80952.1;transl_table=11 PTQV01000046.1 Genbank gene 9564 9752 . + . ID=gene-C5O68_07985;Name=C5O68_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07985 PTQV01000046.1 Protein Homology CDS 9564 9752 . + 0 ID=cds-RJP80953.1;Parent=gene-C5O68_07985;Dbxref=NCBI_GP:RJP80953.1;Name=RJP80953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446229.1;locus_tag=C5O68_07985;product=CopG family transcriptional regulator;protein_id=RJP80953.1;transl_table=11 PTQV01000046.1 Genbank gene 9814 10572 . + . ID=gene-C5O68_07990;Name=C5O68_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07990 PTQV01000046.1 Protein Homology CDS 9814 10572 . + 0 ID=cds-RJP80954.1;Parent=gene-C5O68_07990;Dbxref=NCBI_GP:RJP80954.1;Name=RJP80954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446228.1;locus_tag=C5O68_07990;product=DUF4343 domain-containing protein;protein_id=RJP80954.1;transl_table=11 PTQV01000046.1 Genbank gene 10630 11457 . + . ID=gene-C5O68_07995;Name=C5O68_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_07995 PTQV01000046.1 Protein Homology CDS 10630 11457 . + 0 ID=cds-RJP80955.1;Parent=gene-C5O68_07995;Dbxref=NCBI_GP:RJP80955.1;Name=RJP80955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358540.1;locus_tag=C5O68_07995;product=ADP-ribosylglycohydrolase;protein_id=RJP80955.1;transl_table=11 PTQV01000046.1 Genbank gene 11596 12480 . + . ID=gene-C5O68_08000;Name=C5O68_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08000 PTQV01000046.1 Protein Homology CDS 11596 12480 . + 0 ID=cds-RJP80956.1;Parent=gene-C5O68_08000;Dbxref=NCBI_GP:RJP80956.1;Name=RJP80956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710121.1;locus_tag=C5O68_08000;product=diacylglycerol kinase family lipid kinase;protein_id=RJP80956.1;transl_table=11 PTQV01000046.1 Genbank gene 12619 14382 . + . ID=gene-C5O68_08005;Name=C5O68_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08005 PTQV01000046.1 Protein Homology CDS 12619 14382 . + 0 ID=cds-RJP80957.1;Parent=gene-C5O68_08005;Dbxref=NCBI_GP:RJP80957.1;Name=RJP80957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358542.1;locus_tag=C5O68_08005;product=alpha-glycosidase;protein_id=RJP80957.1;transl_table=11 PTQV01000046.1 Genbank gene 14657 15112 . + . ID=gene-C5O68_08010;Name=C5O68_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08010 PTQV01000046.1 Protein Homology CDS 14657 15112 . + 0 ID=cds-RJP80984.1;Parent=gene-C5O68_08010;Dbxref=NCBI_GP:RJP80984.1;Name=RJP80984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500472.1;locus_tag=C5O68_08010;product=hypothetical protein;protein_id=RJP80984.1;transl_table=11 PTQV01000046.1 Genbank gene 15558 16034 . + . ID=gene-C5O68_08015;Name=C5O68_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08015 PTQV01000046.1 Protein Homology CDS 15558 16034 . + 0 ID=cds-RJP80958.1;Parent=gene-C5O68_08015;Dbxref=NCBI_GP:RJP80958.1;Name=RJP80958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446214.1;locus_tag=C5O68_08015;product=XRE family transcriptional regulator;protein_id=RJP80958.1;transl_table=11 PTQV01000046.1 Genbank gene 16034 16801 . + . ID=gene-C5O68_08020;Name=C5O68_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08020 PTQV01000046.1 Protein Homology CDS 16034 16801 . + 0 ID=cds-RJP80959.1;Parent=gene-C5O68_08020;Dbxref=NCBI_GP:RJP80959.1;Name=RJP80959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262613.1;locus_tag=C5O68_08020;product=toxin PezT;protein_id=RJP80959.1;transl_table=11 PTQV01000046.1 Genbank gene 16805 18136 . + . ID=gene-C5O68_08025;Name=C5O68_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08025 PTQV01000046.1 Protein Homology CDS 16805 18136 . + 0 ID=cds-RJP80960.1;Parent=gene-C5O68_08025;Dbxref=NCBI_GP:RJP80960.1;Name=RJP80960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911647.1;locus_tag=C5O68_08025;product=hypothetical protein;protein_id=RJP80960.1;transl_table=11 PTQV01000046.1 Genbank gene 18129 18851 . + . ID=gene-C5O68_08030;Name=C5O68_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08030 PTQV01000046.1 Protein Homology CDS 18129 18851 . + 0 ID=cds-RJP80961.1;Parent=gene-C5O68_08030;Dbxref=NCBI_GP:RJP80961.1;Name=RJP80961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260388.1;locus_tag=C5O68_08030;product=hypothetical protein;protein_id=RJP80961.1;transl_table=11 PTQV01000046.1 Genbank gene 18823 21477 . + . ID=gene-C5O68_08035;Name=C5O68_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08035 PTQV01000046.1 Protein Homology CDS 18823 21477 . + 0 ID=cds-RJP80985.1;Parent=gene-C5O68_08035;Dbxref=NCBI_GP:RJP80985.1;Name=RJP80985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911649.1;locus_tag=C5O68_08035;product=recombinase RecF;protein_id=RJP80985.1;transl_table=11 PTQV01000046.1 Genbank gene 21817 22173 . + . ID=gene-C5O68_08040;Name=C5O68_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08040 PTQV01000046.1 Protein Homology CDS 21817 22173 . + 0 ID=cds-RJP80962.1;Parent=gene-C5O68_08040;Dbxref=NCBI_GP:RJP80962.1;Name=RJP80962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590090.1;locus_tag=C5O68_08040;product=hypothetical protein;protein_id=RJP80962.1;transl_table=11 PTQV01000046.1 Genbank gene 22178 22543 . + . ID=gene-C5O68_08045;Name=C5O68_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08045 PTQV01000046.1 Protein Homology CDS 22178 22543 . + 0 ID=cds-RJP80963.1;Parent=gene-C5O68_08045;Dbxref=NCBI_GP:RJP80963.1;Name=RJP80963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401240.1;locus_tag=C5O68_08045;product=plasmid mobilization relaxosome protein MobC;protein_id=RJP80963.1;transl_table=11 PTQV01000046.1 Genbank gene 22530 24359 . + . ID=gene-C5O68_08050;Name=C5O68_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08050 PTQV01000046.1 Protein Homology CDS 22530 24359 . + 0 ID=cds-RJP80964.1;Parent=gene-C5O68_08050;Dbxref=NCBI_GP:RJP80964.1;Name=RJP80964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036741.1;locus_tag=C5O68_08050;product=relaxase;protein_id=RJP80964.1;transl_table=11 PTQV01000046.1 Genbank pseudogene 24517 24921 . + . ID=gene-C5O68_08055;Name=C5O68_08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08055;pseudo=true PTQV01000046.1 Protein Homology CDS 24517 24921 . + 0 ID=cds-C5O68_08055;Parent=gene-C5O68_08055;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018379208.1;locus_tag=C5O68_08055;product=IS110 family transposase;pseudo=true;transl_table=11 PTQV01000046.1 Genbank gene 25404 26249 . - . ID=gene-C5O68_08060;Name=C5O68_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08060 PTQV01000046.1 Protein Homology CDS 25404 26249 . - 0 ID=cds-RJP80965.1;Parent=gene-C5O68_08060;Dbxref=NCBI_GP:RJP80965.1;Name=RJP80965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083480.1;locus_tag=C5O68_08060;product=MutR family transcriptional regulator;protein_id=RJP80965.1;transl_table=11 PTQV01000046.1 Genbank gene 26634 27629 . + . ID=gene-C5O68_08065;Name=C5O68_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08065 PTQV01000046.1 GeneMarkS+ CDS 26634 27629 . + 0 ID=cds-RJP80966.1;Parent=gene-C5O68_08065;Dbxref=NCBI_GP:RJP80966.1;Name=RJP80966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08065;product=hypothetical protein;protein_id=RJP80966.1;transl_table=11 PTQV01000046.1 Genbank gene 27619 28812 . + . ID=gene-C5O68_08070;Name=C5O68_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08070 PTQV01000046.1 Protein Homology CDS 27619 28812 . + 0 ID=cds-RJP80967.1;Parent=gene-C5O68_08070;Dbxref=NCBI_GP:RJP80967.1;Name=RJP80967.1;Note=catalyzes the formation of UDP-glucuronate from UDP-glucose;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03026;locus_tag=C5O68_08070;product=UDP-glucose 6-dehydrogenase;protein_id=RJP80967.1;transl_table=11 PTQV01000046.1 Genbank gene 28814 30034 . + . ID=gene-C5O68_08075;Name=C5O68_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08075 PTQV01000046.1 GeneMarkS+ CDS 28814 30034 . + 0 ID=cds-RJP80968.1;Parent=gene-C5O68_08075;Dbxref=NCBI_GP:RJP80968.1;Name=RJP80968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08075;product=hypothetical protein;protein_id=RJP80968.1;transl_table=11 PTQV01000046.1 Genbank gene 30035 31255 . + . ID=gene-C5O68_08080;Name=C5O68_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08080 PTQV01000046.1 Protein Homology CDS 30035 31255 . + 0 ID=cds-RJP80969.1;Parent=gene-C5O68_08080;Dbxref=NCBI_GP:RJP80969.1;Name=RJP80969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01408.20;locus_tag=C5O68_08080;product=gfo/Idh/MocA family oxidoreductase;protein_id=RJP80969.1;transl_table=11 PTQV01000046.1 Genbank gene 31280 32002 . + . ID=gene-C5O68_08085;Name=C5O68_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08085 PTQV01000046.1 Protein Homology CDS 31280 32002 . + 0 ID=cds-RJP80970.1;Parent=gene-C5O68_08085;Dbxref=NCBI_GP:RJP80970.1;Name=RJP80970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13561.4;locus_tag=C5O68_08085;product=hypothetical protein;protein_id=RJP80970.1;transl_table=11 PTQV01000046.1 Genbank gene 31986 32312 . + . ID=gene-C5O68_08090;Name=C5O68_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08090 PTQV01000046.1 GeneMarkS+ CDS 31986 32312 . + 0 ID=cds-RJP80971.1;Parent=gene-C5O68_08090;Dbxref=NCBI_GP:RJP80971.1;Name=RJP80971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08090;product=hypothetical protein;protein_id=RJP80971.1;transl_table=11 PTQV01000046.1 Genbank gene 32246 32917 . + . ID=gene-C5O68_08095;Name=C5O68_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08095 PTQV01000046.1 Protein Homology CDS 32246 32917 . + 0 ID=cds-RJP80972.1;Parent=gene-C5O68_08095;Dbxref=NCBI_GP:RJP80972.1;Name=RJP80972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02958.18;locus_tag=C5O68_08095;product=hypothetical protein;protein_id=RJP80972.1;transl_table=11 PTQV01000046.1 Genbank gene 32907 33689 . + . ID=gene-C5O68_08100;Name=C5O68_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08100 PTQV01000046.1 Protein Homology CDS 32907 33689 . + 0 ID=cds-RJP80973.1;Parent=gene-C5O68_08100;Dbxref=NCBI_GP:RJP80973.1;Name=RJP80973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00456.19;locus_tag=C5O68_08100;product=hypothetical protein;protein_id=RJP80973.1;transl_table=11 PTQV01000046.1 Genbank gene 33676 34560 . + . ID=gene-C5O68_08105;Name=C5O68_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08105 PTQV01000046.1 Protein Homology CDS 33676 34560 . + 0 ID=cds-RJP80974.1;Parent=gene-C5O68_08105;Dbxref=NCBI_GP:RJP80974.1;Name=RJP80974.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02779.22;locus_tag=C5O68_08105;product=hypothetical protein;protein_id=RJP80974.1;transl_table=11 PTQV01000046.1 Genbank gene 34579 36792 . + . ID=gene-C5O68_08110;Name=C5O68_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08110 PTQV01000046.1 Protein Homology CDS 34579 36792 . + 0 ID=cds-RJP80975.1;Parent=gene-C5O68_08110;Dbxref=NCBI_GP:RJP80975.1;Name=RJP80975.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00501.26%2CHMM:PF00550.23;locus_tag=C5O68_08110;product=hypothetical protein;protein_id=RJP80975.1;transl_table=11 PTQV01000046.1 Genbank gene 36785 37420 . + . ID=gene-C5O68_08115;Name=C5O68_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08115 PTQV01000046.1 Protein Homology CDS 36785 37420 . + 0 ID=cds-RJP80976.1;Parent=gene-C5O68_08115;Dbxref=NCBI_GP:RJP80976.1;Name=RJP80976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01648.18;locus_tag=C5O68_08115;product=hypothetical protein;protein_id=RJP80976.1;transl_table=11 PTQV01000046.1 Genbank gene 37417 38025 . + . ID=gene-C5O68_08120;Name=C5O68_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08120 PTQV01000046.1 Protein Homology CDS 37417 38025 . + 0 ID=cds-RJP80977.1;Parent=gene-C5O68_08120;Dbxref=NCBI_GP:RJP80977.1;Name=RJP80977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446222.1;locus_tag=C5O68_08120;product=peptidase S51;protein_id=RJP80977.1;transl_table=11 PTQV01000046.1 Genbank gene 38043 39266 . + . ID=gene-C5O68_08125;Name=C5O68_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08125 PTQV01000046.1 GeneMarkS+ CDS 38043 39266 . + 0 ID=cds-RJP80978.1;Parent=gene-C5O68_08125;Dbxref=NCBI_GP:RJP80978.1;Name=RJP80978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08125;product=hypothetical protein;protein_id=RJP80978.1;transl_table=11 PTQV01000046.1 Genbank gene 39290 40246 . + . ID=gene-C5O68_08130;Name=C5O68_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08130 PTQV01000046.1 Protein Homology CDS 39290 40246 . + 0 ID=cds-RJP80979.1;Parent=gene-C5O68_08130;Dbxref=NCBI_GP:RJP80979.1;Name=RJP80979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=C5O68_08130;product=MFS transporter;protein_id=RJP80979.1;transl_table=11 PTQV01000046.1 Genbank gene 41070 41291 . + . ID=gene-C5O68_08135;Name=C5O68_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08135 PTQV01000046.1 Protein Homology CDS 41070 41291 . + 0 ID=cds-RJP80980.1;Parent=gene-C5O68_08135;Dbxref=NCBI_GP:RJP80980.1;Name=RJP80980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358566.1;locus_tag=C5O68_08135;product=XRE family transcriptional regulator;protein_id=RJP80980.1;transl_table=11 PTQV01000046.1 Genbank gene 41376 41555 . - . ID=gene-C5O68_08140;Name=C5O68_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08140 PTQV01000046.1 Protein Homology CDS 41376 41555 . - 0 ID=cds-RJP80986.1;Parent=gene-C5O68_08140;Dbxref=NCBI_GP:RJP80986.1;Name=RJP80986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042734.1;locus_tag=C5O68_08140;product=hypothetical protein;protein_id=RJP80986.1;transl_table=11 PTQV01000046.1 Genbank pseudogene 41737 41958 . + . ID=gene-C5O68_08145;Name=C5O68_08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08145;pseudo=true PTQV01000046.1 Protein Homology CDS 41737 41958 . + 0 ID=cds-C5O68_08145;Parent=gene-C5O68_08145;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=C5O68_08145;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000046.1 Genbank gene 42114 43337 . + . ID=gene-C5O68_08150;Name=C5O68_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08150 PTQV01000046.1 Protein Homology CDS 42114 43337 . + 0 ID=cds-RJP80981.1;Parent=gene-C5O68_08150;Dbxref=NCBI_GP:RJP80981.1;Name=RJP80981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358567.1;locus_tag=C5O68_08150;product=cell division protein FtsW;protein_id=RJP80981.1;transl_table=11 PTQV01000046.1 Genbank gene 43362 46058 . + . ID=gene-C5O68_08155;Name=C5O68_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08155 PTQV01000046.1 Protein Homology CDS 43362 46058 . + 0 ID=cds-RJP80982.1;Parent=gene-C5O68_08155;Dbxref=NCBI_GP:RJP80982.1;Name=RJP80982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358568.1;locus_tag=C5O68_08155;product=phosphoenolpyruvate carboxylase;protein_id=RJP80982.1;transl_table=11 PTQV01000046.1 Genbank gene 46422 46526 . + . ID=gene-C5O68_08160;Name=C5O68_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08160 PTQV01000046.1 Protein Homology CDS 46422 46526 . + 0 ID=cds-RJP80983.1;Parent=gene-C5O68_08160;Dbxref=NCBI_GP:RJP80983.1;Name=RJP80983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_08160;product=chlorohydrolase;protein_id=RJP80983.1;transl_table=11 ##sequence-region PTQV01000047.1 1 15928 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000047.1 Genbank region 1 15928 . + . ID=PTQV01000047.1:1..15928;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000047.1 Genbank pseudogene 1 871 . - . ID=gene-C5O68_08165;Name=C5O68_08165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08165;pseudo=true PTQV01000047.1 Protein Homology CDS 1 871 . - 0 ID=cds-C5O68_08165;Parent=gene-C5O68_08165;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611311.1;locus_tag=C5O68_08165;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000047.1 Genbank gene 1206 1631 . - . ID=gene-C5O68_08170;Name=C5O68_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08170 PTQV01000047.1 Protein Homology CDS 1206 1631 . - 0 ID=cds-RJP80856.1;Parent=gene-C5O68_08170;Dbxref=NCBI_GP:RJP80856.1;Name=RJP80856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397600.1;locus_tag=C5O68_08170;product=class I and II aminotransferase;protein_id=RJP80856.1;transl_table=11 PTQV01000047.1 Genbank gene 2206 4092 . - . ID=gene-C5O68_08175;Name=C5O68_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08175 PTQV01000047.1 Protein Homology CDS 2206 4092 . - 0 ID=cds-RJP80836.1;Parent=gene-C5O68_08175;Dbxref=NCBI_GP:RJP80836.1;Name=RJP80836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397602.1;locus_tag=C5O68_08175;product=relaxase;protein_id=RJP80836.1;transl_table=11 PTQV01000047.1 Genbank gene 4079 4444 . - . ID=gene-C5O68_08180;Name=C5O68_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08180 PTQV01000047.1 Protein Homology CDS 4079 4444 . - 0 ID=cds-RJP80837.1;Parent=gene-C5O68_08180;Dbxref=NCBI_GP:RJP80837.1;Name=RJP80837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368526.1;locus_tag=C5O68_08180;product=plasmid mobilization relaxosome protein MobC;protein_id=RJP80837.1;transl_table=11 PTQV01000047.1 Genbank gene 4447 4809 . - . ID=gene-C5O68_08185;Name=C5O68_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08185 PTQV01000047.1 Protein Homology CDS 4447 4809 . - 0 ID=cds-RJP80838.1;Parent=gene-C5O68_08185;Dbxref=NCBI_GP:RJP80838.1;Name=RJP80838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397604.1;locus_tag=C5O68_08185;product=hypothetical protein;protein_id=RJP80838.1;transl_table=11 PTQV01000047.1 Genbank pseudogene 4944 5182 . + . ID=gene-C5O68_08190;Name=C5O68_08190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08190;pseudo=true PTQV01000047.1 Protein Homology CDS 4944 5182 . + 0 ID=cds-C5O68_08190;Parent=gene-C5O68_08190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649754.1;locus_tag=C5O68_08190;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000047.1 Genbank gene 5142 5957 . - . ID=gene-C5O68_08195;Name=C5O68_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08195 PTQV01000047.1 Protein Homology CDS 5142 5957 . - 0 ID=cds-RJP80839.1;Parent=gene-C5O68_08195;Dbxref=NCBI_GP:RJP80839.1;Name=RJP80839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10088.7;locus_tag=C5O68_08195;product=hypothetical protein;protein_id=RJP80839.1;transl_table=11 PTQV01000047.1 Genbank gene 5890 6861 . - . ID=gene-C5O68_08200;Name=C5O68_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08200 PTQV01000047.1 GeneMarkS+ CDS 5890 6861 . - 0 ID=cds-RJP80840.1;Parent=gene-C5O68_08200;Dbxref=NCBI_GP:RJP80840.1;Name=RJP80840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08200;product=hypothetical protein;protein_id=RJP80840.1;transl_table=11 PTQV01000047.1 Genbank gene 6851 7084 . - . ID=gene-C5O68_08205;Name=C5O68_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08205 PTQV01000047.1 Protein Homology CDS 6851 7084 . - 0 ID=cds-RJP80841.1;Parent=gene-C5O68_08205;Dbxref=NCBI_GP:RJP80841.1;Name=RJP80841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000925380.1;locus_tag=C5O68_08205;product=hypothetical protein;protein_id=RJP80841.1;transl_table=11 PTQV01000047.1 Genbank gene 7071 7634 . - . ID=gene-C5O68_08210;Name=C5O68_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08210 PTQV01000047.1 Protein Homology CDS 7071 7634 . - 0 ID=cds-RJP80842.1;Parent=gene-C5O68_08210;Dbxref=NCBI_GP:RJP80842.1;Name=RJP80842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397606.1;locus_tag=C5O68_08210;product=hypothetical protein;protein_id=RJP80842.1;transl_table=11 PTQV01000047.1 Genbank gene 7831 8613 . - . ID=gene-C5O68_08215;Name=C5O68_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08215 PTQV01000047.1 Protein Homology CDS 7831 8613 . - 0 ID=cds-RJP80843.1;Parent=gene-C5O68_08215;Dbxref=NCBI_GP:RJP80843.1;Name=RJP80843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397607.1;locus_tag=C5O68_08215;product=toxin PezT;protein_id=RJP80843.1;transl_table=11 PTQV01000047.1 Genbank gene 8613 9089 . - . ID=gene-C5O68_08220;Name=C5O68_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08220 PTQV01000047.1 Protein Homology CDS 8613 9089 . - 0 ID=cds-RJP80844.1;Parent=gene-C5O68_08220;Dbxref=NCBI_GP:RJP80844.1;Name=RJP80844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028711.1;locus_tag=C5O68_08220;product=XRE family transcriptional regulator;protein_id=RJP80844.1;transl_table=11 PTQV01000047.1 Genbank gene 9158 9445 . - . ID=gene-C5O68_08225;Name=C5O68_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08225 PTQV01000047.1 Protein Homology CDS 9158 9445 . - 0 ID=cds-RJP80845.1;Parent=gene-C5O68_08225;Dbxref=NCBI_GP:RJP80845.1;Name=RJP80845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007520113.1;locus_tag=C5O68_08225;product=hypothetical protein;protein_id=RJP80845.1;transl_table=11 PTQV01000047.1 Genbank gene 9491 9886 . - . ID=gene-C5O68_08230;Name=C5O68_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08230 PTQV01000047.1 Protein Homology CDS 9491 9886 . - 0 ID=cds-RJP80846.1;Parent=gene-C5O68_08230;Dbxref=NCBI_GP:RJP80846.1;Name=RJP80846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014294863.1;locus_tag=C5O68_08230;product=chemotaxis protein;protein_id=RJP80846.1;transl_table=11 PTQV01000047.1 Genbank gene 9883 10116 . - . ID=gene-C5O68_08235;Name=C5O68_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08235 PTQV01000047.1 Protein Homology CDS 9883 10116 . - 0 ID=cds-RJP80847.1;Parent=gene-C5O68_08235;Dbxref=NCBI_GP:RJP80847.1;Name=RJP80847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028261.1;locus_tag=C5O68_08235;product=hypothetical protein;protein_id=RJP80847.1;transl_table=11 PTQV01000047.1 Genbank gene 10170 11258 . - . ID=gene-C5O68_08240;Name=C5O68_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08240 PTQV01000047.1 Protein Homology CDS 10170 11258 . - 0 ID=cds-RJP80848.1;Parent=gene-C5O68_08240;Dbxref=NCBI_GP:RJP80848.1;Name=RJP80848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028260.1;locus_tag=C5O68_08240;product=DNA primase;protein_id=RJP80848.1;transl_table=11 PTQV01000047.1 Genbank gene 11297 11935 . - . ID=gene-C5O68_08245;Name=C5O68_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08245 PTQV01000047.1 Protein Homology CDS 11297 11935 . - 0 ID=cds-RJP80849.1;Parent=gene-C5O68_08245;Dbxref=NCBI_GP:RJP80849.1;Name=RJP80849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017649760.1;locus_tag=C5O68_08245;product=peptidylprolyl isomerase;protein_id=RJP80849.1;transl_table=11 PTQV01000047.1 Genbank pseudogene 12032 12292 . + . ID=gene-C5O68_08250;Name=C5O68_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08250;pseudo=true PTQV01000047.1 Protein Homology CDS 12032 12292 . + 0 ID=cds-C5O68_08250;Parent=gene-C5O68_08250;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558202.1;locus_tag=C5O68_08250;product=ISL3 family transposase;pseudo=true;transl_table=11 PTQV01000047.1 Genbank gene 12382 12540 . - . ID=gene-C5O68_08255;Name=C5O68_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08255 PTQV01000047.1 Protein Homology CDS 12382 12540 . - 0 ID=cds-RJP80850.1;Parent=gene-C5O68_08255;Dbxref=NCBI_GP:RJP80850.1;Name=RJP80850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=C5O68_08255;product=hypothetical protein;protein_id=RJP80850.1;transl_table=11 PTQV01000047.1 Genbank pseudogene 12611 13057 . - . ID=gene-C5O68_08260;Name=C5O68_08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08260;pseudo=true PTQV01000047.1 Protein Homology CDS 12611 13057 . - 0 ID=cds-C5O68_08260;Parent=gene-C5O68_08260;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=C5O68_08260;product=transposase;pseudo=true;transl_table=11 PTQV01000047.1 Genbank gene 13133 13930 . - . ID=gene-C5O68_08265;Name=C5O68_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08265 PTQV01000047.1 Protein Homology CDS 13133 13930 . - 0 ID=cds-RJP80851.1;Parent=gene-C5O68_08265;Dbxref=NCBI_GP:RJP80851.1;Name=RJP80851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=C5O68_08265;product=transposase;protein_id=RJP80851.1;transl_table=11 PTQV01000047.1 Genbank gene 13833 14027 . - . ID=gene-C5O68_08270;Name=C5O68_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08270 PTQV01000047.1 Protein Homology CDS 13833 14027 . - 0 ID=cds-RJP80852.1;Parent=gene-C5O68_08270;Dbxref=NCBI_GP:RJP80852.1;Name=RJP80852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018380232.1;locus_tag=C5O68_08270;product=transposase;protein_id=RJP80852.1;transl_table=11 PTQV01000047.1 Genbank gene 14093 14443 . - . ID=gene-C5O68_08275;Name=C5O68_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08275 PTQV01000047.1 Protein Homology CDS 14093 14443 . - 0 ID=cds-RJP80853.1;Parent=gene-C5O68_08275;Dbxref=NCBI_GP:RJP80853.1;Name=RJP80853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843875.1;locus_tag=C5O68_08275;product=IS66 family insertion sequence hypothetical protein;protein_id=RJP80853.1;transl_table=11 PTQV01000047.1 Genbank gene 14424 14609 . - . ID=gene-C5O68_08280;Name=C5O68_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08280 PTQV01000047.1 Protein Homology CDS 14424 14609 . - 0 ID=cds-RJP80854.1;Parent=gene-C5O68_08280;Dbxref=NCBI_GP:RJP80854.1;Name=RJP80854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=C5O68_08280;product=hypothetical protein;protein_id=RJP80854.1;transl_table=11 PTQV01000047.1 Genbank gene 14822 15913 . - . ID=gene-C5O68_08285;Name=C5O68_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08285 PTQV01000047.1 Protein Homology CDS 14822 15913 . - 0 ID=cds-RJP80855.1;Parent=gene-C5O68_08285;Dbxref=NCBI_GP:RJP80855.1;Name=RJP80855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035094.1;locus_tag=C5O68_08285;product=hypothetical protein;protein_id=RJP80855.1;transl_table=11 ##sequence-region PTQV01000048.1 1 10056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000048.1 Genbank region 1 10056 . + . ID=PTQV01000048.1:1..10056;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000048.1 Genbank pseudogene 36 116 . + . ID=gene-C5O68_08290;Name=C5O68_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08290;pseudo=true PTQV01000048.1 Protein Homology CDS 36 116 . + 0 ID=cds-C5O68_08290;Parent=gene-C5O68_08290;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820552.1;locus_tag=C5O68_08290;product=UDP-galactopuranose mutase;pseudo=true;transl_table=11 PTQV01000048.1 Genbank gene 185 493 . - . ID=gene-C5O68_08295;Name=C5O68_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08295 PTQV01000048.1 Protein Homology CDS 185 493 . - 0 ID=cds-RJP80754.1;Parent=gene-C5O68_08295;Dbxref=NCBI_GP:RJP80754.1;Name=RJP80754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445821.1;locus_tag=C5O68_08295;product=hypothetical protein;protein_id=RJP80754.1;transl_table=11 PTQV01000048.1 Genbank gene 980 7660 . - . ID=gene-C5O68_08300;Name=C5O68_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08300 PTQV01000048.1 Protein Homology CDS 980 7660 . - 0 ID=cds-RJP80755.1;Parent=gene-C5O68_08300;Dbxref=NCBI_GP:RJP80755.1;Name=RJP80755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445820.1;locus_tag=C5O68_08300;product=serine protease;protein_id=RJP80755.1;transl_table=11 PTQV01000048.1 Genbank pseudogene 8453 8539 . + . ID=gene-C5O68_08305;Name=C5O68_08305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08305;pseudo=true PTQV01000048.1 Protein Homology CDS 8453 8539 . + 0 ID=cds-C5O68_08305;Parent=gene-C5O68_08305;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105960.1;locus_tag=C5O68_08305;product=acyl-ACP desaturase;pseudo=true;transl_table=11 PTQV01000048.1 Genbank gene 8529 8897 . + . ID=gene-C5O68_08310;Name=C5O68_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08310 PTQV01000048.1 Protein Homology CDS 8529 8897 . + 0 ID=cds-RJP80756.1;Parent=gene-C5O68_08310;Dbxref=NCBI_GP:RJP80756.1;Name=RJP80756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399287.1;locus_tag=C5O68_08310;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=RJP80756.1;transl_table=11 PTQV01000048.1 Genbank gene 8997 10056 . - . ID=gene-C5O68_08315;Name=C5O68_08315;end_range=10056,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08315;partial=true PTQV01000048.1 Protein Homology CDS 8997 10056 . - 1 ID=cds-RJP80757.1;Parent=gene-C5O68_08315;Dbxref=NCBI_GP:RJP80757.1;Name=RJP80757.1;end_range=10056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399288.1;locus_tag=C5O68_08315;partial=true;product=hypothetical protein;protein_id=RJP80757.1;transl_table=11 ##sequence-region PTQV01000049.1 1 6855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000049.1 Genbank region 1 6855 . + . ID=PTQV01000049.1:1..6855;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000049.1 Genbank gene 134 1054 . - . ID=gene-C5O68_08320;Name=C5O68_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08320 PTQV01000049.1 Protein Homology CDS 134 1054 . - 0 ID=cds-RJP80727.1;Parent=gene-C5O68_08320;Dbxref=NCBI_GP:RJP80727.1;Name=RJP80727.1;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358323.1;locus_tag=C5O68_08320;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=RJP80727.1;transl_table=11 PTQV01000049.1 Genbank gene 1145 1879 . - . ID=gene-C5O68_08325;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=C5O68_08325 PTQV01000049.1 Protein Homology CDS 1145 1879 . - 0 ID=cds-RJP80728.1;Parent=gene-C5O68_08325;Dbxref=NCBI_GP:RJP80728.1;Name=RJP80728.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358322.1;locus_tag=C5O68_08325;product=amino acid ABC transporter ATP-binding protein;protein_id=RJP80728.1;transl_table=11 PTQV01000049.1 Genbank gene 1879 2562 . - . ID=gene-C5O68_08330;Name=C5O68_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08330 PTQV01000049.1 Protein Homology CDS 1879 2562 . - 0 ID=cds-RJP80729.1;Parent=gene-C5O68_08330;Dbxref=NCBI_GP:RJP80729.1;Name=RJP80729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445983.1;locus_tag=C5O68_08330;product=amino acid ABC transporter permease;protein_id=RJP80729.1;transl_table=11 PTQV01000049.1 Genbank gene 2752 2982 . + . ID=gene-C5O68_08335;Name=C5O68_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08335 PTQV01000049.1 Protein Homology CDS 2752 2982 . + 0 ID=cds-RJP80730.1;Parent=gene-C5O68_08335;Dbxref=NCBI_GP:RJP80730.1;Name=RJP80730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003105222.1;locus_tag=C5O68_08335;product=DUF1797 domain-containing protein;protein_id=RJP80730.1;transl_table=11 PTQV01000049.1 Genbank gene 3211 5469 . + . ID=gene-C5O68_08340;Name=C5O68_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08340 PTQV01000049.1 Protein Homology CDS 3211 5469 . + 0 ID=cds-RJP80731.1;Parent=gene-C5O68_08340;Dbxref=NCBI_GP:RJP80731.1;Name=RJP80731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445981.1;locus_tag=C5O68_08340;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=RJP80731.1;transl_table=11 PTQV01000049.1 Genbank gene 5598 6050 . + . ID=gene-C5O68_08345;Name=C5O68_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08345 PTQV01000049.1 Protein Homology CDS 5598 6050 . + 0 ID=cds-RJP80732.1;Parent=gene-C5O68_08345;Dbxref=NCBI_GP:RJP80732.1;Name=RJP80732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445980.1;locus_tag=C5O68_08345;product=NUDIX domain-containing protein;protein_id=RJP80732.1;transl_table=11 PTQV01000049.1 Genbank gene 6261 6560 . + . ID=gene-C5O68_08350;Name=C5O68_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08350 PTQV01000049.1 Protein Homology CDS 6261 6560 . + 0 ID=cds-RJP80733.1;Parent=gene-C5O68_08350;Dbxref=NCBI_GP:RJP80733.1;Name=RJP80733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358314.1;locus_tag=C5O68_08350;product=DUF1827 domain-containing protein;protein_id=RJP80733.1;transl_table=11 ##sequence-region PTQV01000004.1 1 17672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000004.1 Genbank region 1 17672 . + . ID=PTQV01000004.1:1..17672;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000004.1 Genbank pseudogene 1 701 . + . ID=gene-C5O68_01110;Name=C5O68_01110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01110;pseudo=true PTQV01000004.1 Protein Homology CDS 1 701 . + 2 ID=cds-C5O68_01110;Parent=gene-C5O68_01110;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_01110;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000004.1 Genbank gene 820 1167 . - . ID=gene-C5O68_01115;Name=C5O68_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01115 PTQV01000004.1 Protein Homology CDS 820 1167 . - 0 ID=cds-RJP84402.1;Parent=gene-C5O68_01115;Dbxref=NCBI_GP:RJP84402.1;Name=RJP84402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446532.1;locus_tag=C5O68_01115;product=lactoylglutathione lyase;protein_id=RJP84402.1;transl_table=11 PTQV01000004.1 Genbank gene 1278 3053 . - . ID=gene-C5O68_01120;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=C5O68_01120 PTQV01000004.1 Protein Homology CDS 1278 3053 . - 0 ID=cds-RJP84403.1;Parent=gene-C5O68_01120;Dbxref=NCBI_GP:RJP84403.1;Name=RJP84403.1;gbkey=CDS;gene=spxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446533.1;locus_tag=C5O68_01120;product=pyruvate oxidase;protein_id=RJP84403.1;transl_table=11 PTQV01000004.1 Genbank gene 3055 3249 . + . ID=gene-C5O68_01125;Name=C5O68_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01125 PTQV01000004.1 Protein Homology CDS 3055 3249 . + 0 ID=cds-RJP84404.1;Parent=gene-C5O68_01125;Dbxref=NCBI_GP:RJP84404.1;Name=RJP84404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843838.1;locus_tag=C5O68_01125;product=hypothetical protein;protein_id=RJP84404.1;transl_table=11 PTQV01000004.1 Genbank gene 3259 5502 . - . ID=gene-C5O68_01130;Name=C5O68_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01130 PTQV01000004.1 Protein Homology CDS 3259 5502 . - 0 ID=cds-RJP84405.1;Parent=gene-C5O68_01130;Dbxref=NCBI_GP:RJP84405.1;Name=RJP84405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446534.1;locus_tag=C5O68_01130;product=copper-translocating P-type ATPase;protein_id=RJP84405.1;transl_table=11 PTQV01000004.1 Genbank gene 5512 5883 . - . ID=gene-C5O68_01135;Name=C5O68_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01135 PTQV01000004.1 Protein Homology CDS 5512 5883 . - 0 ID=cds-RJP84406.1;Parent=gene-C5O68_01135;Dbxref=NCBI_GP:RJP84406.1;Name=RJP84406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446535.1;locus_tag=C5O68_01135;product=ATPase;protein_id=RJP84406.1;transl_table=11 PTQV01000004.1 Genbank gene 5894 6289 . - . ID=gene-C5O68_01140;Name=C5O68_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01140 PTQV01000004.1 Protein Homology CDS 5894 6289 . - 0 ID=cds-RJP84407.1;Parent=gene-C5O68_01140;Dbxref=NCBI_GP:RJP84407.1;Name=RJP84407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446536.1;locus_tag=C5O68_01140;product=CopY/TcrY family copper transport repressor;protein_id=RJP84407.1;transl_table=11 PTQV01000004.1 cmsearch riboswitch 6473 6571 . + . ID=id-PTQV01000004.1:6473..6571;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000004.1 Genbank gene 6655 7446 . + . ID=gene-C5O68_01145;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=C5O68_01145 PTQV01000004.1 Protein Homology CDS 6655 7446 . + 0 ID=cds-RJP84408.1;Parent=gene-C5O68_01145;Dbxref=NCBI_GP:RJP84408.1;Name=RJP84408.1;gbkey=CDS;gene=thiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358232.1;locus_tag=C5O68_01145;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=RJP84408.1;transl_table=11 PTQV01000004.1 Genbank gene 7652 8284 . - . ID=gene-C5O68_01150;Name=C5O68_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01150 PTQV01000004.1 Protein Homology CDS 7652 8284 . - 0 ID=cds-RJP84409.1;Parent=gene-C5O68_01150;Dbxref=NCBI_GP:RJP84409.1;Name=RJP84409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358231.1;locus_tag=C5O68_01150;product=thiamine phosphate synthase;protein_id=RJP84409.1;transl_table=11 PTQV01000004.1 Genbank gene 8277 9080 . - . ID=gene-C5O68_01155;Name=C5O68_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01155 PTQV01000004.1 Protein Homology CDS 8277 9080 . - 0 ID=cds-RJP84410.1;Parent=gene-C5O68_01155;Dbxref=NCBI_GP:RJP84410.1;Name=RJP84410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358230.1;locus_tag=C5O68_01155;product=hydroxyethylthiazole kinase;protein_id=RJP84410.1;transl_table=11 PTQV01000004.1 Genbank gene 9080 9604 . - . ID=gene-C5O68_01160;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=C5O68_01160 PTQV01000004.1 Protein Homology CDS 9080 9604 . - 0 ID=cds-RJP84411.1;Parent=gene-C5O68_01160;Dbxref=NCBI_GP:RJP84411.1;Name=RJP84411.1;gbkey=CDS;gene=thiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358229.1;locus_tag=C5O68_01160;product=energy coupling factor transporter S component ThiW;protein_id=RJP84411.1;transl_table=11 PTQV01000004.1 Genbank gene 9610 10299 . - . ID=gene-C5O68_01165;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=C5O68_01165 PTQV01000004.1 Protein Homology CDS 9610 10299 . - 0 ID=cds-RJP84412.1;Parent=gene-C5O68_01165;Dbxref=NCBI_GP:RJP84412.1;Name=RJP84412.1;gbkey=CDS;gene=tenA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358228.1;locus_tag=C5O68_01165;product=thiaminase II;protein_id=RJP84412.1;transl_table=11 PTQV01000004.1 Genbank gene 10310 10960 . - . ID=gene-C5O68_01170;Name=C5O68_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01170 PTQV01000004.1 Protein Homology CDS 10310 10960 . - 0 ID=cds-RJP84413.1;Parent=gene-C5O68_01170;Dbxref=NCBI_GP:RJP84413.1;Name=RJP84413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358227.1;locus_tag=C5O68_01170;product=cobalt ABC transporter permease;protein_id=RJP84413.1;transl_table=11 PTQV01000004.1 Genbank gene 10962 12347 . - . ID=gene-C5O68_01175;Name=C5O68_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01175 PTQV01000004.1 Protein Homology CDS 10962 12347 . - 0 ID=cds-RJP84414.1;Parent=gene-C5O68_01175;Dbxref=NCBI_GP:RJP84414.1;Name=RJP84414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358226.1;locus_tag=C5O68_01175;product=sugar ABC transporter ATP-binding protein;protein_id=RJP84414.1;transl_table=11 PTQV01000004.1 Genbank gene 12348 12941 . - . ID=gene-C5O68_01180;Name=C5O68_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01180 PTQV01000004.1 Protein Homology CDS 12348 12941 . - 0 ID=cds-RJP84415.1;Parent=gene-C5O68_01180;Dbxref=NCBI_GP:RJP84415.1;Name=RJP84415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358225.1;locus_tag=C5O68_01180;product=cobalt ABC transporter permease;protein_id=RJP84415.1;transl_table=11 PTQV01000004.1 cmsearch riboswitch 13169 13257 . - . ID=id-PTQV01000004.1:13169..13257;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000004.1 Genbank gene 13373 14002 . - . ID=gene-C5O68_01185;Name=C5O68_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01185 PTQV01000004.1 Protein Homology CDS 13373 14002 . - 0 ID=cds-RJP84416.1;Parent=gene-C5O68_01185;Dbxref=NCBI_GP:RJP84416.1;Name=RJP84416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358224.1;locus_tag=C5O68_01185;product=thiamine phosphate synthase;protein_id=RJP84416.1;transl_table=11 PTQV01000004.1 Genbank gene 14004 14807 . - . ID=gene-C5O68_01190;Name=C5O68_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01190 PTQV01000004.1 Protein Homology CDS 14004 14807 . - 0 ID=cds-RJP84417.1;Parent=gene-C5O68_01190;Dbxref=NCBI_GP:RJP84417.1;Name=RJP84417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358223.1;locus_tag=C5O68_01190;product=hydroxyethylthiazole kinase;protein_id=RJP84417.1;transl_table=11 PTQV01000004.1 Genbank gene 15099 15767 . - . ID=gene-C5O68_01195;Name=C5O68_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01195 PTQV01000004.1 Protein Homology CDS 15099 15767 . - 0 ID=cds-RJP84418.1;Parent=gene-C5O68_01195;Dbxref=NCBI_GP:RJP84418.1;Name=RJP84418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405341.1;locus_tag=C5O68_01195;product=transcriptional regulator;protein_id=RJP84418.1;transl_table=11 PTQV01000004.1 cmsearch riboswitch 15985 16073 . - . ID=id-PTQV01000004.1:15985..16073;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000004.1 Genbank gene 16222 17358 . - . ID=gene-C5O68_01200;Name=lctO;gbkey=Gene;gene=lctO;gene_biotype=protein_coding;locus_tag=C5O68_01200 PTQV01000004.1 Protein Homology CDS 16222 17358 . - 0 ID=cds-RJP84419.1;Parent=gene-C5O68_01200;Dbxref=NCBI_GP:RJP84419.1;Name=RJP84419.1;gbkey=CDS;gene=lctO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358221.1;locus_tag=C5O68_01200;product=L-lactate oxidase;protein_id=RJP84419.1;transl_table=11 ##sequence-region PTQV01000050.1 1 700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000050.1 Genbank region 1 700 . + . ID=PTQV01000050.1:1..700;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000050.1 Genbank gene 545 670 . - . ID=gene-C5O68_08355;Name=C5O68_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08355 PTQV01000050.1 Protein Homology CDS 545 670 . - 0 ID=cds-RJP80720.1;Parent=gene-C5O68_08355;Dbxref=NCBI_GP:RJP80720.1;Name=RJP80720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_08355;product=hypothetical protein;protein_id=RJP80720.1;transl_table=11 ##sequence-region PTQV01000051.1 1 18112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000051.1 Genbank region 1 18112 . + . ID=PTQV01000051.1:1..18112;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000051.1 Genbank pseudogene 1 185 . - . ID=gene-C5O68_08360;Name=C5O68_08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08360;pseudo=true PTQV01000051.1 Protein Homology CDS 1 185 . - 0 ID=cds-C5O68_08360;Parent=gene-C5O68_08360;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_08360;product=transposase;pseudo=true;transl_table=11 PTQV01000051.1 Genbank pseudogene 394 1009 . + . ID=gene-C5O68_08365;Name=C5O68_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08365;pseudo=true PTQV01000051.1 Protein Homology CDS 394 1009 . + 0 ID=cds-C5O68_08365;Parent=gene-C5O68_08365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558195.1;locus_tag=C5O68_08365;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000051.1 Genbank pseudogene 1112 1219 . + . ID=gene-C5O68_08370;Name=C5O68_08370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08370;pseudo=true PTQV01000051.1 Protein Homology CDS 1112 1219 . + 0 ID=cds-C5O68_08370;Parent=gene-C5O68_08370;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_08370;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000051.1 Genbank gene 1365 2240 . - . ID=gene-C5O68_08375;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=C5O68_08375 PTQV01000051.1 Protein Homology CDS 1365 2240 . - 0 ID=cds-RJP80641.1;Parent=gene-C5O68_08375;Dbxref=NCBI_GP:RJP80641.1;Name=RJP80641.1;gbkey=CDS;gene=aguB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358417.1;locus_tag=C5O68_08375;product=N-carbamoylputrescine amidase;protein_id=RJP80641.1;transl_table=11 PTQV01000051.1 Genbank gene 2250 3335 . - . ID=gene-C5O68_08380;Name=aguA;gbkey=Gene;gene=aguA;gene_biotype=protein_coding;locus_tag=C5O68_08380 PTQV01000051.1 Protein Homology CDS 2250 3335 . - 0 ID=cds-RJP80642.1;Parent=gene-C5O68_08380;Dbxref=NCBI_GP:RJP80642.1;Name=RJP80642.1;gbkey=CDS;gene=aguA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358416.1;locus_tag=C5O68_08380;product=agmatine deiminase;protein_id=RJP80642.1;transl_table=11 PTQV01000051.1 Genbank gene 3332 4459 . - . ID=gene-C5O68_08385;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=C5O68_08385 PTQV01000051.1 Protein Homology CDS 3332 4459 . - 0 ID=cds-RJP80643.1;Parent=gene-C5O68_08385;Dbxref=NCBI_GP:RJP80643.1;Name=RJP80643.1;gbkey=CDS;gene=nspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358415.1;locus_tag=C5O68_08385;product=carboxynorspermidine decarboxylase;protein_id=RJP80643.1;transl_table=11 PTQV01000051.1 Genbank gene 4459 5718 . - . ID=gene-C5O68_08390;Name=C5O68_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08390 PTQV01000051.1 Protein Homology CDS 4459 5718 . - 0 ID=cds-RJP80644.1;Parent=gene-C5O68_08390;Dbxref=NCBI_GP:RJP80644.1;Name=RJP80644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358414.1;locus_tag=C5O68_08390;product=saccharopine dehydrogenase;protein_id=RJP80644.1;transl_table=11 PTQV01000051.1 Genbank gene 5715 6575 . - . ID=gene-C5O68_08395;Name=C5O68_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08395 PTQV01000051.1 Protein Homology CDS 5715 6575 . - 0 ID=cds-RJP80645.1;Parent=gene-C5O68_08395;Dbxref=NCBI_GP:RJP80645.1;Name=RJP80645.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358413.1;locus_tag=C5O68_08395;product=polyamine aminopropyltransferase;protein_id=RJP80645.1;transl_table=11 PTQV01000051.1 Genbank gene 6576 8036 . - . ID=gene-C5O68_08400;Name=C5O68_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08400 PTQV01000051.1 Protein Homology CDS 6576 8036 . - 0 ID=cds-RJP80646.1;Parent=gene-C5O68_08400;Dbxref=NCBI_GP:RJP80646.1;Name=RJP80646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732143.1;locus_tag=C5O68_08400;product=arginine decarboxylase;protein_id=RJP80646.1;transl_table=11 PTQV01000051.1 Genbank gene 8328 8510 . + . ID=gene-C5O68_08405;Name=C5O68_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08405 PTQV01000051.1 Protein Homology CDS 8328 8510 . + 0 ID=cds-RJP80647.1;Parent=gene-C5O68_08405;Dbxref=NCBI_GP:RJP80647.1;Name=RJP80647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809529.1;locus_tag=C5O68_08405;product=hypothetical protein;protein_id=RJP80647.1;transl_table=11 PTQV01000051.1 Genbank gene 8743 9792 . + . ID=gene-C5O68_08410;Name=C5O68_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08410 PTQV01000051.1 Protein Homology CDS 8743 9792 . + 0 ID=cds-RJP80648.1;Parent=gene-C5O68_08410;Dbxref=NCBI_GP:RJP80648.1;Name=RJP80648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001153810.1;locus_tag=C5O68_08410;product=IS30 family transposase;protein_id=RJP80648.1;transl_table=11 PTQV01000051.1 Genbank gene 9767 10408 . + . ID=gene-C5O68_08415;Name=C5O68_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08415 PTQV01000051.1 Protein Homology CDS 9767 10408 . + 0 ID=cds-RJP80649.1;Parent=gene-C5O68_08415;Dbxref=NCBI_GP:RJP80649.1;Name=RJP80649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358408.1;locus_tag=C5O68_08415;product=VIT family protein;protein_id=RJP80649.1;transl_table=11 PTQV01000051.1 Genbank gene 10450 12438 . - . ID=gene-C5O68_08420;Name=C5O68_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08420 PTQV01000051.1 Protein Homology CDS 10450 12438 . - 0 ID=cds-RJP80650.1;Parent=gene-C5O68_08420;Dbxref=NCBI_GP:RJP80650.1;Name=RJP80650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358407.1;locus_tag=C5O68_08420;product=ABC transporter permease;protein_id=RJP80650.1;transl_table=11 PTQV01000051.1 Genbank gene 12440 13198 . - . ID=gene-C5O68_08425;Name=C5O68_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08425 PTQV01000051.1 Protein Homology CDS 12440 13198 . - 0 ID=cds-RJP80651.1;Parent=gene-C5O68_08425;Dbxref=NCBI_GP:RJP80651.1;Name=RJP80651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446188.1;locus_tag=C5O68_08425;product=ABC transporter ATP-binding protein;protein_id=RJP80651.1;transl_table=11 PTQV01000051.1 Genbank gene 13626 13817 . + . ID=gene-C5O68_08430;Name=C5O68_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08430 PTQV01000051.1 Protein Homology CDS 13626 13817 . + 0 ID=cds-RJP80652.1;Parent=gene-C5O68_08430;Dbxref=NCBI_GP:RJP80652.1;Name=RJP80652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358405.1;locus_tag=C5O68_08430;product=hypothetical protein;protein_id=RJP80652.1;transl_table=11 PTQV01000051.1 Genbank gene 14171 14473 . - . ID=gene-C5O68_08435;Name=C5O68_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08435 PTQV01000051.1 Protein Homology CDS 14171 14473 . - 0 ID=cds-RJP80653.1;Parent=gene-C5O68_08435;Dbxref=NCBI_GP:RJP80653.1;Name=RJP80653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358404.1;locus_tag=C5O68_08435;product=PspC domain-containing protein;protein_id=RJP80653.1;transl_table=11 PTQV01000051.1 Genbank gene 14502 14951 . - . ID=gene-C5O68_08440;Name=C5O68_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08440 PTQV01000051.1 Protein Homology CDS 14502 14951 . - 0 ID=cds-RJP80654.1;Parent=gene-C5O68_08440;Dbxref=NCBI_GP:RJP80654.1;Name=RJP80654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446192.1;locus_tag=C5O68_08440;product=SprT family protein;protein_id=RJP80654.1;transl_table=11 PTQV01000051.1 Genbank gene 14938 17067 . - . ID=gene-C5O68_08445;Name=C5O68_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08445 PTQV01000051.1 Protein Homology CDS 14938 17067 . - 0 ID=cds-RJP80655.1;Parent=gene-C5O68_08445;Dbxref=NCBI_GP:RJP80655.1;Name=RJP80655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446193.1;locus_tag=C5O68_08445;product=RNA-binding transcriptional accessory protein;protein_id=RJP80655.1;transl_table=11 PTQV01000051.1 Genbank pseudogene 17169 17647 . - . ID=gene-C5O68_08450;Name=C5O68_08450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08450;pseudo=true PTQV01000051.1 Protein Homology CDS 17169 17647 . - 0 ID=cds-C5O68_08450;Parent=gene-C5O68_08450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000442116.1;locus_tag=C5O68_08450;product=capsular biosynthesis protein;pseudo=true;transl_table=11 PTQV01000051.1 Genbank pseudogene 17652 17744 . - . ID=gene-C5O68_08455;Name=C5O68_08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08455;pseudo=true PTQV01000051.1 Protein Homology CDS 17652 17744 . - 0 ID=cds-C5O68_08455;Parent=gene-C5O68_08455;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856145.1;locus_tag=C5O68_08455;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 PTQV01000051.1 Genbank gene 17823 18104 . - . ID=gene-C5O68_08460;Name=C5O68_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08460 PTQV01000051.1 Protein Homology CDS 17823 18104 . - 0 ID=cds-RJP80656.1;Parent=gene-C5O68_08460;Dbxref=NCBI_GP:RJP80656.1;Name=RJP80656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_08460;product=hypothetical protein;protein_id=RJP80656.1;transl_table=11 ##sequence-region PTQV01000052.1 1 18405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000052.1 Genbank region 1 18405 . + . ID=PTQV01000052.1:1..18405;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000052.1 Genbank gene 163 873 . + . ID=gene-C5O68_08465;Name=C5O68_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08465 PTQV01000052.1 Protein Homology CDS 163 873 . + 0 ID=cds-RJP80593.1;Parent=gene-C5O68_08465;Dbxref=NCBI_GP:RJP80593.1;Name=RJP80593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358169.1;locus_tag=C5O68_08465;product=cytochrome c biogenesis protein CcdA;protein_id=RJP80593.1;transl_table=11 PTQV01000052.1 Genbank gene 893 1459 . + . ID=gene-C5O68_08470;Name=C5O68_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08470 PTQV01000052.1 Protein Homology CDS 893 1459 . + 0 ID=cds-RJP80594.1;Parent=gene-C5O68_08470;Dbxref=NCBI_GP:RJP80594.1;Name=RJP80594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759281.1;locus_tag=C5O68_08470;product=thioredoxin family protein;protein_id=RJP80594.1;transl_table=11 PTQV01000052.1 Genbank gene 1470 2582 . + . ID=gene-C5O68_08475;Name=C5O68_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08475 PTQV01000052.1 Protein Homology CDS 1470 2582 . + 0 ID=cds-RJP80595.1;Parent=gene-C5O68_08475;Dbxref=NCBI_GP:RJP80595.1;Name=RJP80595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358171.1;locus_tag=C5O68_08475;product=peptide-methionine (R)-S-oxide reductase;protein_id=RJP80595.1;transl_table=11 PTQV01000052.1 Genbank pseudogene 2579 2769 . - . ID=gene-C5O68_08480;Name=C5O68_08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08480;pseudo=true PTQV01000052.1 Protein Homology CDS 2579 2769 . - 0 ID=cds-C5O68_08480;Parent=gene-C5O68_08480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_08480;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000052.1 Genbank gene 2849 3586 . + . ID=gene-C5O68_08485;Name=C5O68_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08485 PTQV01000052.1 Protein Homology CDS 2849 3586 . + 0 ID=cds-RJP80596.1;Parent=gene-C5O68_08485;Dbxref=NCBI_GP:RJP80596.1;Name=RJP80596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446587.1;locus_tag=C5O68_08485;product=DNA-binding response regulator;protein_id=RJP80596.1;transl_table=11 PTQV01000052.1 Genbank gene 3583 5274 . + . ID=gene-C5O68_08490;Name=C5O68_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08490 PTQV01000052.1 Protein Homology CDS 3583 5274 . + 0 ID=cds-RJP80597.1;Parent=gene-C5O68_08490;Dbxref=NCBI_GP:RJP80597.1;Name=RJP80597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358173.1;locus_tag=C5O68_08490;product=sensor histidine kinase;protein_id=RJP80597.1;transl_table=11 PTQV01000052.1 Genbank gene 5368 5952 . + . ID=gene-C5O68_08495;Name=C5O68_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08495 PTQV01000052.1 Protein Homology CDS 5368 5952 . + 0 ID=cds-RJP80598.1;Parent=gene-C5O68_08495;Dbxref=NCBI_GP:RJP80598.1;Name=RJP80598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446585.1;locus_tag=C5O68_08495;product=TIGR01440 family protein;protein_id=RJP80598.1;transl_table=11 PTQV01000052.1 Genbank gene 6049 12525 . + . ID=gene-C5O68_08500;Name=C5O68_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08500 PTQV01000052.1 Protein Homology CDS 6049 12525 . + 0 ID=cds-RJP80603.1;Parent=gene-C5O68_08500;Dbxref=NCBI_GP:RJP80603.1;Name=RJP80603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472969.1;locus_tag=C5O68_08500;product=zinc metalloprotease;protein_id=RJP80603.1;transl_table=11 PTQV01000052.1 Genbank gene 12586 14307 . + . ID=gene-C5O68_08505;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=C5O68_08505 PTQV01000052.1 Protein Homology CDS 12586 14307 . + 0 ID=cds-RJP80599.1;Parent=gene-C5O68_08505;Dbxref=NCBI_GP:RJP80599.1;Name=RJP80599.1;gbkey=CDS;gene=pabB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358176.1;locus_tag=C5O68_08505;product=aminodeoxychorismate synthase%2C component I;protein_id=RJP80599.1;transl_table=11 PTQV01000052.1 Genbank pseudogene 14308 14925 . + . ID=gene-C5O68_08510;Name=C5O68_08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08510;pseudo=true PTQV01000052.1 Protein Homology CDS 14308 14925 . + 0 ID=cds-C5O68_08510;Parent=gene-C5O68_08510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446582.1;locus_tag=C5O68_08510;product=alpha/beta hydrolase;pseudo=true;transl_table=11 PTQV01000052.1 Genbank gene 14975 16342 . + . ID=gene-C5O68_08515;Name=C5O68_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08515 PTQV01000052.1 Protein Homology CDS 14975 16342 . + 0 ID=cds-RJP80600.1;Parent=gene-C5O68_08515;Dbxref=NCBI_GP:RJP80600.1;Name=RJP80600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361341.1;locus_tag=C5O68_08515;product=D-alanyl-D-alanine carboxypeptidase;protein_id=RJP80600.1;transl_table=11 PTQV01000052.1 Genbank gene 16447 17406 . + . ID=gene-C5O68_08520;Name=C5O68_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08520 PTQV01000052.1 Protein Homology CDS 16447 17406 . + 0 ID=cds-RJP80601.1;Parent=gene-C5O68_08520;Dbxref=NCBI_GP:RJP80601.1;Name=RJP80601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446580.1;locus_tag=C5O68_08520;product=glucokinase;protein_id=RJP80601.1;transl_table=11 PTQV01000052.1 Genbank gene 17504 18343 . + . ID=gene-C5O68_08525;Name=C5O68_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08525 PTQV01000052.1 Protein Homology CDS 17504 18343 . + 0 ID=cds-RJP80602.1;Parent=gene-C5O68_08525;Dbxref=NCBI_GP:RJP80602.1;Name=RJP80602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003011065.1;locus_tag=C5O68_08525;product=thymidylate synthase;protein_id=RJP80602.1;transl_table=11 ##sequence-region PTQV01000053.1 1 15268 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000053.1 Genbank region 1 15268 . + . ID=PTQV01000053.1:1..15268;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000053.1 Genbank pseudogene 37 669 . - . ID=gene-C5O68_08530;Name=C5O68_08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08530;pseudo=true PTQV01000053.1 Protein Homology CDS 37 669 . - 0 ID=cds-C5O68_08530;Parent=gene-C5O68_08530;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358960.1;locus_tag=C5O68_08530;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000053.1 Genbank gene 1034 4309 . + . ID=gene-C5O68_08535;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=C5O68_08535 PTQV01000053.1 Protein Homology CDS 1034 4309 . + 0 ID=cds-RJP80548.1;Parent=gene-C5O68_08535;Dbxref=NCBI_GP:RJP80548.1;Name=RJP80548.1;gbkey=CDS;gene=rexB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446179.1;locus_tag=C5O68_08535;product=ATP-dependent nuclease subunit B;protein_id=RJP80548.1;transl_table=11 PTQV01000053.1 Genbank gene 4306 7956 . + . ID=gene-C5O68_08540;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=C5O68_08540 PTQV01000053.1 Protein Homology CDS 4306 7956 . + 0 ID=cds-RJP80549.1;Parent=gene-C5O68_08540;Dbxref=NCBI_GP:RJP80549.1;Name=RJP80549.1;gbkey=CDS;gene=addA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358634.1;locus_tag=C5O68_08540;product=helicase-exonuclease AddAB subunit AddA;protein_id=RJP80549.1;transl_table=11 PTQV01000053.1 Genbank gene 7974 9098 . + . ID=gene-C5O68_08545;Name=C5O68_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08545 PTQV01000053.1 Protein Homology CDS 7974 9098 . + 0 ID=cds-RJP80550.1;Parent=gene-C5O68_08545;Dbxref=NCBI_GP:RJP80550.1;Name=RJP80550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001821549.1;locus_tag=C5O68_08545;product=hypothetical protein;protein_id=RJP80550.1;transl_table=11 PTQV01000053.1 Genbank gene 9391 14688 . + . ID=gene-C5O68_08550;Name=C5O68_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08550 PTQV01000053.1 Protein Homology CDS 9391 14688 . + 0 ID=cds-RJP80551.1;Parent=gene-C5O68_08550;Dbxref=NCBI_GP:RJP80551.1;Name=RJP80551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417152.1;locus_tag=C5O68_08550;product=peptidase;protein_id=RJP80551.1;transl_table=11 PTQV01000053.1 Genbank pseudogene 14731 14820 . + . ID=gene-C5O68_08555;Name=C5O68_08555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08555;pseudo=true PTQV01000053.1 Protein Homology CDS 14731 14820 . + 0 ID=cds-C5O68_08555;Parent=gene-C5O68_08555;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001834334.1;locus_tag=C5O68_08555;product=peptidase;pseudo=true;transl_table=11 PTQV01000053.1 Genbank gene 14898 15056 . - . ID=gene-C5O68_08560;Name=C5O68_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08560 PTQV01000053.1 Protein Homology CDS 14898 15056 . - 0 ID=cds-RJP80553.1;Parent=gene-C5O68_08560;Dbxref=NCBI_GP:RJP80553.1;Name=RJP80553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=C5O68_08560;product=hypothetical protein;protein_id=RJP80553.1;transl_table=11 PTQV01000053.1 Genbank gene 15127 15268 . - . ID=gene-C5O68_08565;Name=C5O68_08565;end_range=15268,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08565;partial=true PTQV01000053.1 Protein Homology CDS 15127 15268 . - 1 ID=cds-RJP80552.1;Parent=gene-C5O68_08565;Dbxref=NCBI_GP:RJP80552.1;Name=RJP80552.1;end_range=15268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=C5O68_08565;partial=true;product=transposase;protein_id=RJP80552.1;transl_table=11 ##sequence-region PTQV01000054.1 1 1662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000054.1 Genbank region 1 1662 . + . ID=PTQV01000054.1:1..1662;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000054.1 Genbank gene 1 1584 . - . ID=gene-C5O68_08570;Name=C5O68_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08570 PTQV01000054.1 Protein Homology CDS 1 1584 . - 0 ID=cds-RJP80538.1;Parent=gene-C5O68_08570;Dbxref=NCBI_GP:RJP80538.1;Name=RJP80538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009531330.1;locus_tag=C5O68_08570;product=IS1634 family transposase;protein_id=RJP80538.1;transl_table=11 ##sequence-region PTQV01000055.1 1 46021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000055.1 Genbank region 1 46021 . + . ID=PTQV01000055.1:1..46021;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000055.1 Genbank gene 332 1015 . + . ID=gene-C5O68_08575;Name=C5O68_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08575 PTQV01000055.1 Protein Homology CDS 332 1015 . + 0 ID=cds-RJP80395.1;Parent=gene-C5O68_08575;Dbxref=NCBI_GP:RJP80395.1;Name=RJP80395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429260.1;locus_tag=C5O68_08575;product=ribose 5-phosphate isomerase A;protein_id=RJP80395.1;transl_table=11 PTQV01000055.1 Genbank gene 1029 2240 . + . ID=gene-C5O68_08580;Name=C5O68_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08580 PTQV01000055.1 Protein Homology CDS 1029 2240 . + 0 ID=cds-RJP80396.1;Parent=gene-C5O68_08580;Dbxref=NCBI_GP:RJP80396.1;Name=RJP80396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445990.1;locus_tag=C5O68_08580;product=phosphopentomutase;protein_id=RJP80396.1;transl_table=11 PTQV01000055.1 Genbank gene 2242 2784 . + . ID=gene-C5O68_08585;Name=C5O68_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08585 PTQV01000055.1 Protein Homology CDS 2242 2784 . + 0 ID=cds-RJP80397.1;Parent=gene-C5O68_08585;Dbxref=NCBI_GP:RJP80397.1;Name=RJP80397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398095.1;locus_tag=C5O68_08585;product=DUF1697 domain-containing protein;protein_id=RJP80397.1;transl_table=11 PTQV01000055.1 Genbank gene 2800 3609 . + . ID=gene-C5O68_08590;Name=C5O68_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08590 PTQV01000055.1 Protein Homology CDS 2800 3609 . + 0 ID=cds-RJP80398.1;Parent=gene-C5O68_08590;Dbxref=NCBI_GP:RJP80398.1;Name=RJP80398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358328.1;locus_tag=C5O68_08590;product=purine-nucleoside phosphorylase;protein_id=RJP80398.1;transl_table=11 PTQV01000055.1 Genbank pseudogene 3937 6682 . + . ID=gene-C5O68_08595;Name=C5O68_08595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08595;pseudo=true PTQV01000055.1 Protein Homology CDS 3937 6682 . + 0 ID=cds-C5O68_08595;Parent=gene-C5O68_08595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690148.1;locus_tag=C5O68_08595;product=hemolysin;pseudo=true;transl_table=11 PTQV01000055.1 Genbank pseudogene 6790 6864 . + . ID=gene-C5O68_08600;Name=C5O68_08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08600;pseudo=true PTQV01000055.1 Protein Homology CDS 6790 6864 . + 0 ID=cds-C5O68_08600;Parent=gene-C5O68_08600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_08600;product=UDP-galactopuranose mutase;pseudo=true;transl_table=11 PTQV01000055.1 Genbank pseudogene 7431 7621 . - . ID=gene-C5O68_08605;Name=C5O68_08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08605;pseudo=true PTQV01000055.1 Protein Homology CDS 7431 7621 . - 0 ID=cds-C5O68_08605;Parent=gene-C5O68_08605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845794.1;locus_tag=C5O68_08605;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000055.1 Genbank gene 7627 8337 . + . ID=gene-C5O68_08610;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=C5O68_08610 PTQV01000055.1 Protein Homology CDS 7627 8337 . + 0 ID=cds-RJP80399.1;Parent=gene-C5O68_08610;Dbxref=NCBI_GP:RJP80399.1;Name=RJP80399.1;gbkey=CDS;gene=deoD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445995.1;locus_tag=C5O68_08610;product=purine-nucleoside phosphorylase;protein_id=RJP80399.1;transl_table=11 PTQV01000055.1 Genbank gene 8432 8944 . - . ID=gene-C5O68_08615;Name=C5O68_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08615 PTQV01000055.1 Protein Homology CDS 8432 8944 . - 0 ID=cds-RJP80400.1;Parent=gene-C5O68_08615;Dbxref=NCBI_GP:RJP80400.1;Name=RJP80400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684224.1;locus_tag=C5O68_08615;product=topology modulation protein;protein_id=RJP80400.1;transl_table=11 PTQV01000055.1 Genbank gene 8997 9233 . - . ID=gene-C5O68_08620;Name=C5O68_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08620 PTQV01000055.1 Protein Homology CDS 8997 9233 . - 0 ID=cds-RJP80401.1;Parent=gene-C5O68_08620;Dbxref=NCBI_GP:RJP80401.1;Name=RJP80401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358334.2;locus_tag=C5O68_08620;product=30S ribosomal protein S20;protein_id=RJP80401.1;transl_table=11 PTQV01000055.1 Genbank gene 9301 10221 . - . ID=gene-C5O68_08625;Name=C5O68_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08625 PTQV01000055.1 Protein Homology CDS 9301 10221 . - 0 ID=cds-RJP80402.1;Parent=gene-C5O68_08625;Dbxref=NCBI_GP:RJP80402.1;Name=RJP80402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445999.1;locus_tag=C5O68_08625;product=type I pantothenate kinase;protein_id=RJP80402.1;transl_table=11 PTQV01000055.1 Genbank pseudogene 10421 10819 . + . ID=gene-C5O68_08630;Name=C5O68_08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08630;pseudo=true PTQV01000055.1 Protein Homology CDS 10421 10819 . + 0 ID=cds-C5O68_08630;Parent=gene-C5O68_08630;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446000.1;locus_tag=C5O68_08630;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000055.1 Genbank pseudogene 10809 11036 . - . ID=gene-C5O68_08635;Name=C5O68_08635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08635;pseudo=true PTQV01000055.1 Protein Homology CDS 10809 11036 . - 0 ID=cds-C5O68_08635;Parent=gene-C5O68_08635;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844328.1;locus_tag=C5O68_08635;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000055.1 Genbank gene 11035 11625 . + . ID=gene-C5O68_08640;Name=C5O68_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08640 PTQV01000055.1 Protein Homology CDS 11035 11625 . + 0 ID=cds-RJP80403.1;Parent=gene-C5O68_08640;Dbxref=NCBI_GP:RJP80403.1;Name=RJP80403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446003.1;locus_tag=C5O68_08640;product=16S rRNA methyltransferase;protein_id=RJP80403.1;transl_table=11 PTQV01000055.1 Genbank gene 11622 12899 . + . ID=gene-C5O68_08645;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=C5O68_08645 PTQV01000055.1 Protein Homology CDS 11622 12899 . + 0 ID=cds-RJP80404.1;Parent=gene-C5O68_08645;Dbxref=NCBI_GP:RJP80404.1;Name=RJP80404.1;Note=Catalyzes the reversible phosphorolysis of thymidine%2C deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate;gbkey=CDS;gene=deoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446004.1;locus_tag=C5O68_08645;product=pyrimidine-nucleoside phosphorylase;protein_id=RJP80404.1;transl_table=11 PTQV01000055.1 Genbank gene 12919 13581 . + . ID=gene-C5O68_08650;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=C5O68_08650 PTQV01000055.1 Protein Homology CDS 12919 13581 . + 0 ID=cds-RJP80405.1;Parent=gene-C5O68_08650;Dbxref=NCBI_GP:RJP80405.1;Name=RJP80405.1;gbkey=CDS;gene=deoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358339.1;locus_tag=C5O68_08650;product=deoxyribose-phosphate aldolase;protein_id=RJP80405.1;transl_table=11 PTQV01000055.1 Genbank gene 13568 13957 . + . ID=gene-C5O68_08655;Name=C5O68_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08655 PTQV01000055.1 Protein Homology CDS 13568 13957 . + 0 ID=cds-RJP80406.1;Parent=gene-C5O68_08655;Dbxref=NCBI_GP:RJP80406.1;Name=RJP80406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358340.1;locus_tag=C5O68_08655;product=cytidine deaminase;protein_id=RJP80406.1;transl_table=11 PTQV01000055.1 Genbank gene 14047 15099 . + . ID=gene-C5O68_08660;Name=C5O68_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08660 PTQV01000055.1 Protein Homology CDS 14047 15099 . + 0 ID=cds-RJP80407.1;Parent=gene-C5O68_08660;Dbxref=NCBI_GP:RJP80407.1;Name=RJP80407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446007.1;locus_tag=C5O68_08660;product=BMP family ABC transporter substrate-binding protein;protein_id=RJP80407.1;transl_table=11 PTQV01000055.1 Genbank gene 15243 16778 . + . ID=gene-C5O68_08665;Name=C5O68_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08665 PTQV01000055.1 Protein Homology CDS 15243 16778 . + 0 ID=cds-RJP80408.1;Parent=gene-C5O68_08665;Dbxref=NCBI_GP:RJP80408.1;Name=RJP80408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446008.1;locus_tag=C5O68_08665;product=heme ABC transporter ATP-binding protein;protein_id=RJP80408.1;transl_table=11 PTQV01000055.1 Genbank gene 16771 17829 . + . ID=gene-C5O68_08670;Name=C5O68_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08670 PTQV01000055.1 Protein Homology CDS 16771 17829 . + 0 ID=cds-RJP80409.1;Parent=gene-C5O68_08670;Dbxref=NCBI_GP:RJP80409.1;Name=RJP80409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446009.1;locus_tag=C5O68_08670;product=ABC transporter permease;protein_id=RJP80409.1;transl_table=11 PTQV01000055.1 Genbank gene 17832 18788 . + . ID=gene-C5O68_08675;Name=C5O68_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08675 PTQV01000055.1 Protein Homology CDS 17832 18788 . + 0 ID=cds-RJP80410.1;Parent=gene-C5O68_08675;Dbxref=NCBI_GP:RJP80410.1;Name=RJP80410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446010.1;locus_tag=C5O68_08675;product=sugar ABC transporter permease;protein_id=RJP80410.1;transl_table=11 PTQV01000055.1 Genbank gene 18826 19467 . - . ID=gene-C5O68_08680;Name=C5O68_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08680 PTQV01000055.1 Protein Homology CDS 18826 19467 . - 0 ID=cds-RJP80411.1;Parent=gene-C5O68_08680;Dbxref=NCBI_GP:RJP80411.1;Name=RJP80411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446011.1;locus_tag=C5O68_08680;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=RJP80411.1;transl_table=11 PTQV01000055.1 Genbank gene 19603 21546 . + . ID=gene-C5O68_08685;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=C5O68_08685 PTQV01000055.1 Protein Homology CDS 19603 21546 . + 0 ID=cds-RJP80412.1;Parent=gene-C5O68_08685;Dbxref=NCBI_GP:RJP80412.1;Name=RJP80412.1;gbkey=CDS;gene=parE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358350.1;locus_tag=C5O68_08685;product=DNA topoisomerase IV subunit B;protein_id=RJP80412.1;transl_table=11 PTQV01000055.1 Genbank pseudogene 21561 23589 . + . ID=gene-C5O68_08690;Name=C5O68_08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08690;pseudo=true PTQV01000055.1 Protein Homology CDS 21561 23589 . + 0 ID=cds-C5O68_08690;Parent=gene-C5O68_08690;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014166.1;locus_tag=C5O68_08690;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 PTQV01000055.1 Genbank gene 23607 24728 . + . ID=gene-C5O68_08695;Name=C5O68_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08695 PTQV01000055.1 Protein Homology CDS 23607 24728 . + 0 ID=cds-RJP80413.1;Parent=gene-C5O68_08695;Dbxref=NCBI_GP:RJP80413.1;Name=RJP80413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=C5O68_08695;product=type II restriction endonuclease;protein_id=RJP80413.1;transl_table=11 PTQV01000055.1 Genbank gene 24878 25219 . + . ID=gene-C5O68_08700;Name=C5O68_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08700 PTQV01000055.1 Protein Homology CDS 24878 25219 . + 0 ID=cds-RJP80414.1;Parent=gene-C5O68_08700;Dbxref=NCBI_GP:RJP80414.1;Name=RJP80414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000247490.1;locus_tag=C5O68_08700;product=hypothetical protein;protein_id=RJP80414.1;transl_table=11 PTQV01000055.1 Genbank gene 25232 25834 . + . ID=gene-C5O68_08705;Name=C5O68_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08705 PTQV01000055.1 Protein Homology CDS 25232 25834 . + 0 ID=cds-RJP80415.1;Parent=gene-C5O68_08705;Dbxref=NCBI_GP:RJP80415.1;Name=RJP80415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002395946.1;locus_tag=C5O68_08705;product=cell filamentation protein Fic;protein_id=RJP80415.1;transl_table=11 PTQV01000055.1 Genbank gene 25899 26726 . + . ID=gene-C5O68_08710;Name=C5O68_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08710 PTQV01000055.1 Protein Homology CDS 25899 26726 . + 0 ID=cds-RJP80416.1;Parent=gene-C5O68_08710;Dbxref=NCBI_GP:RJP80416.1;Name=RJP80416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217743.1;locus_tag=C5O68_08710;product=aminoglycoside adenylyltransferase;protein_id=RJP80416.1;transl_table=11 PTQV01000055.1 Genbank gene 26756 27316 . + . ID=gene-C5O68_08715;Name=C5O68_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08715 PTQV01000055.1 Protein Homology CDS 26756 27316 . + 0 ID=cds-RJP80417.1;Parent=gene-C5O68_08715;Dbxref=NCBI_GP:RJP80417.1;Name=RJP80417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288800.1;locus_tag=C5O68_08715;product=GTP pyrophosphokinase;protein_id=RJP80417.1;transl_table=11 PTQV01000055.1 Genbank gene 27800 30271 . + . ID=gene-C5O68_08720;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=C5O68_08720 PTQV01000055.1 Protein Homology CDS 27800 30271 . + 0 ID=cds-RJP80418.1;Parent=gene-C5O68_08720;Dbxref=NCBI_GP:RJP80418.1;Name=RJP80418.1;gbkey=CDS;gene=parC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446019.1;locus_tag=C5O68_08720;product=DNA topoisomerase IV subunit A;protein_id=RJP80418.1;transl_table=11 PTQV01000055.1 Genbank gene 30406 31428 . + . ID=gene-C5O68_08725;Name=C5O68_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08725 PTQV01000055.1 Protein Homology CDS 30406 31428 . + 0 ID=cds-RJP80419.1;Parent=gene-C5O68_08725;Dbxref=NCBI_GP:RJP80419.1;Name=RJP80419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446020.1;locus_tag=C5O68_08725;product=branched-chain amino acid aminotransferase;protein_id=RJP80419.1;transl_table=11 PTQV01000055.1 Genbank gene 31451 33418 . + . ID=gene-C5O68_08730;Name=C5O68_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08730 PTQV01000055.1 Protein Homology CDS 31451 33418 . + 0 ID=cds-RJP80420.1;Parent=gene-C5O68_08730;Dbxref=NCBI_GP:RJP80420.1;Name=RJP80420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446021.1;locus_tag=C5O68_08730;product=peptide ABC transporter ATP-binding protein;protein_id=RJP80420.1;transl_table=11 PTQV01000055.1 Genbank gene 33483 34172 . + . ID=gene-C5O68_08735;Name=C5O68_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08735 PTQV01000055.1 Protein Homology CDS 33483 34172 . + 0 ID=cds-RJP80421.1;Parent=gene-C5O68_08735;Dbxref=NCBI_GP:RJP80421.1;Name=RJP80421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000454813.1;locus_tag=C5O68_08735;product=DUF969 domain-containing protein;protein_id=RJP80421.1;transl_table=11 PTQV01000055.1 Genbank gene 34169 35092 . + . ID=gene-C5O68_08740;Name=C5O68_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08740 PTQV01000055.1 Protein Homology CDS 34169 35092 . + 0 ID=cds-RJP80422.1;Parent=gene-C5O68_08740;Dbxref=NCBI_GP:RJP80422.1;Name=RJP80422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358355.1;locus_tag=C5O68_08740;product=DUF979 domain-containing protein;protein_id=RJP80422.1;transl_table=11 PTQV01000055.1 Genbank gene 35107 35751 . + . ID=gene-C5O68_08745;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=C5O68_08745 PTQV01000055.1 Protein Homology CDS 35107 35751 . + 0 ID=cds-RJP80423.1;Parent=gene-C5O68_08745;Dbxref=NCBI_GP:RJP80423.1;Name=RJP80423.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358356.1;locus_tag=C5O68_08745;product=Pyrrolidone-carboxylate peptidase 1;protein_id=RJP80423.1;transl_table=11 PTQV01000055.1 Genbank gene 35919 36149 . + . ID=gene-C5O68_08750;Name=C5O68_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08750 PTQV01000055.1 Protein Homology CDS 35919 36149 . + 0 ID=cds-RJP80424.1;Parent=gene-C5O68_08750;Dbxref=NCBI_GP:RJP80424.1;Name=RJP80424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358357.1;locus_tag=C5O68_08750;product=DUF2969 domain-containing protein;protein_id=RJP80424.1;transl_table=11 PTQV01000055.1 Genbank gene 36199 36279 . + . ID=gene-C5O68_08755;Name=C5O68_08755;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_08755 PTQV01000055.1 tRNAscan-SE tRNA 36199 36279 . + . ID=rna-C5O68_08755;Parent=gene-C5O68_08755;anticodon=(pos:36233..36235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_08755;product=tRNA-Tyr PTQV01000055.1 tRNAscan-SE exon 36199 36279 . + . ID=exon-C5O68_08755-1;Parent=rna-C5O68_08755;anticodon=(pos:36233..36235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_08755;product=tRNA-Tyr PTQV01000055.1 Genbank gene 36289 36360 . + . ID=gene-C5O68_08760;Name=C5O68_08760;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_08760 PTQV01000055.1 tRNAscan-SE tRNA 36289 36360 . + . ID=rna-C5O68_08760;Parent=gene-C5O68_08760;anticodon=(pos:36321..36323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_08760;product=tRNA-Gln PTQV01000055.1 tRNAscan-SE exon 36289 36360 . + . ID=exon-C5O68_08760-1;Parent=rna-C5O68_08760;anticodon=(pos:36321..36323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_08760;product=tRNA-Gln PTQV01000055.1 Genbank gene 36523 37725 . + . ID=gene-C5O68_08765;Name=C5O68_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08765 PTQV01000055.1 Protein Homology CDS 36523 37725 . + 0 ID=cds-RJP80425.1;Parent=gene-C5O68_08765;Dbxref=NCBI_GP:RJP80425.1;Name=RJP80425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002897515.1;locus_tag=C5O68_08765;product=30S ribosomal protein S1;protein_id=RJP80425.1;transl_table=11 PTQV01000055.1 Genbank gene 37812 38309 . + . ID=gene-C5O68_08770;Name=C5O68_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08770 PTQV01000055.1 Protein Homology CDS 37812 38309 . + 0 ID=cds-RJP80426.1;Parent=gene-C5O68_08770;Dbxref=NCBI_GP:RJP80426.1;Name=RJP80426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358362.1;locus_tag=C5O68_08770;product=GAF domain-containing protein;protein_id=RJP80426.1;transl_table=11 PTQV01000055.1 Genbank gene 38309 39964 . + . ID=gene-C5O68_08775;Name=C5O68_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08775 PTQV01000055.1 Protein Homology CDS 38309 39964 . + 0 ID=cds-RJP80427.1;Parent=gene-C5O68_08775;Dbxref=NCBI_GP:RJP80427.1;Name=RJP80427.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358363.1;locus_tag=C5O68_08775;product=DNA polymerase III subunit gamma/tau;protein_id=RJP80427.1;transl_table=11 PTQV01000055.1 Genbank gene 39992 40186 . + . ID=gene-C5O68_08780;Name=C5O68_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08780 PTQV01000055.1 Protein Homology CDS 39992 40186 . + 0 ID=cds-RJP80428.1;Parent=gene-C5O68_08780;Dbxref=NCBI_GP:RJP80428.1;Name=RJP80428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358364.1;locus_tag=C5O68_08780;product=DUF3272 domain-containing protein;protein_id=RJP80428.1;transl_table=11 PTQV01000055.1 Genbank gene 40249 40350 . + . ID=gene-C5O68_08785;Name=C5O68_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08785 PTQV01000055.1 Protein Homology CDS 40249 40350 . + 0 ID=cds-RJP80433.1;Parent=gene-C5O68_08785;Dbxref=NCBI_GP:RJP80433.1;Name=RJP80433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_08785;product=DNA alkylation repair protein;protein_id=RJP80433.1;transl_table=11 PTQV01000055.1 Genbank gene 40451 41221 . + . ID=gene-C5O68_08790;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=C5O68_08790 PTQV01000055.1 Protein Homology CDS 40451 41221 . + 0 ID=cds-RJP80434.1;Parent=gene-C5O68_08790;Dbxref=NCBI_GP:RJP80434.1;Name=RJP80434.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446027.1;locus_tag=C5O68_08790;product=Fe-S cluster assembly ATPase SufC;protein_id=RJP80434.1;transl_table=11 PTQV01000055.1 Genbank gene 41249 42511 . + . ID=gene-C5O68_08795;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=C5O68_08795 PTQV01000055.1 Protein Homology CDS 41249 42511 . + 0 ID=cds-RJP80429.1;Parent=gene-C5O68_08795;Dbxref=NCBI_GP:RJP80429.1;Name=RJP80429.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446028.1;locus_tag=C5O68_08795;product=Fe-S cluster assembly protein SufD;protein_id=RJP80429.1;transl_table=11 PTQV01000055.1 Genbank gene 42522 43748 . + . ID=gene-C5O68_08800;Name=C5O68_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08800 PTQV01000055.1 Protein Homology CDS 42522 43748 . + 0 ID=cds-RJP80430.1;Parent=gene-C5O68_08800;Dbxref=NCBI_GP:RJP80430.1;Name=RJP80430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446029.1;locus_tag=C5O68_08800;product=cysteine desulfurase;protein_id=RJP80430.1;transl_table=11 PTQV01000055.1 Genbank gene 43735 44175 . + . ID=gene-C5O68_08805;Name=C5O68_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08805 PTQV01000055.1 Protein Homology CDS 43735 44175 . + 0 ID=cds-RJP80431.1;Parent=gene-C5O68_08805;Dbxref=NCBI_GP:RJP80431.1;Name=RJP80431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358368.1;locus_tag=C5O68_08805;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=RJP80431.1;transl_table=11 PTQV01000055.1 Genbank gene 44233 45645 . + . ID=gene-C5O68_08810;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=C5O68_08810 PTQV01000055.1 Protein Homology CDS 44233 45645 . + 0 ID=cds-RJP80432.1;Parent=gene-C5O68_08810;Dbxref=NCBI_GP:RJP80432.1;Name=RJP80432.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446031.1;locus_tag=C5O68_08810;product=Fe-S cluster assembly protein SufB;protein_id=RJP80432.1;transl_table=11 ##sequence-region PTQV01000056.1 1 26303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000056.1 Genbank region 1 26303 . + . ID=PTQV01000056.1:1..26303;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000056.1 Genbank gene 1 545 . - . ID=gene-C5O68_08815;Name=C5O68_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08815;partial=true;start_range=.,1 PTQV01000056.1 Protein Homology CDS 1 545 . - 0 ID=cds-RJP80325.1;Parent=gene-C5O68_08815;Dbxref=NCBI_GP:RJP80325.1;Name=RJP80325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359333.1;locus_tag=C5O68_08815;partial=true;product=hypothetical protein;protein_id=RJP80325.1;start_range=.,1;transl_table=11 PTQV01000056.1 Genbank gene 558 1016 . - . ID=gene-C5O68_08820;Name=C5O68_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08820 PTQV01000056.1 Protein Homology CDS 558 1016 . - 0 ID=cds-RJP80326.1;Parent=gene-C5O68_08820;Dbxref=NCBI_GP:RJP80326.1;Name=RJP80326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186958.1;locus_tag=C5O68_08820;product=DUF4231 domain-containing protein;protein_id=RJP80326.1;transl_table=11 PTQV01000056.1 Genbank gene 1331 1945 . - . ID=gene-C5O68_08825;Name=C5O68_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08825 PTQV01000056.1 Protein Homology CDS 1331 1945 . - 0 ID=cds-RJP80347.1;Parent=gene-C5O68_08825;Dbxref=NCBI_GP:RJP80347.1;Name=RJP80347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284940.1;locus_tag=C5O68_08825;product=hypothetical protein;protein_id=RJP80347.1;transl_table=11 PTQV01000056.1 Genbank pseudogene 2228 2533 . - . ID=gene-C5O68_08830;Name=C5O68_08830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08830;pseudo=true PTQV01000056.1 Protein Homology CDS 2228 2533 . - 0 ID=cds-C5O68_08830;Parent=gene-C5O68_08830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=C5O68_08830;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000056.1 Genbank pseudogene 4118 4687 . - . ID=gene-C5O68_08835;Name=C5O68_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08835;pseudo=true PTQV01000056.1 Protein Homology CDS 4118 4687 . - 0 ID=cds-C5O68_08835;Parent=gene-C5O68_08835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000473604.1;locus_tag=C5O68_08835;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000056.1 Genbank gene 5267 5488 . - . ID=gene-C5O68_08840;Name=C5O68_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08840 PTQV01000056.1 GeneMarkS+ CDS 5267 5488 . - 0 ID=cds-RJP80327.1;Parent=gene-C5O68_08840;Dbxref=NCBI_GP:RJP80327.1;Name=RJP80327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_08840;product=hypothetical protein;protein_id=RJP80327.1;transl_table=11 PTQV01000056.1 Genbank pseudogene 5764 5997 . - . ID=gene-C5O68_08845;Name=C5O68_08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08845;pseudo=true PTQV01000056.1 Protein Homology CDS 5764 5997 . - 0 ID=cds-C5O68_08845;Parent=gene-C5O68_08845;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843963.1;locus_tag=C5O68_08845;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000056.1 Genbank gene 6744 7169 . - . ID=gene-C5O68_08850;Name=C5O68_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08850 PTQV01000056.1 Protein Homology CDS 6744 7169 . - 0 ID=cds-RJP80328.1;Parent=gene-C5O68_08850;Dbxref=NCBI_GP:RJP80328.1;Name=RJP80328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000204059.1;locus_tag=C5O68_08850;product=hypothetical protein;protein_id=RJP80328.1;transl_table=11 PTQV01000056.1 Genbank gene 7162 7776 . - . ID=gene-C5O68_08855;Name=C5O68_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08855 PTQV01000056.1 Protein Homology CDS 7162 7776 . - 0 ID=cds-RJP80348.1;Parent=gene-C5O68_08855;Dbxref=NCBI_GP:RJP80348.1;Name=RJP80348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236771.1;locus_tag=C5O68_08855;product=ImmA/IrrE family metallo-endopeptidase;protein_id=RJP80348.1;transl_table=11 PTQV01000056.1 Genbank gene 7921 8265 . - . ID=gene-C5O68_08860;Name=C5O68_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08860 PTQV01000056.1 Protein Homology CDS 7921 8265 . - 0 ID=cds-RJP80329.1;Parent=gene-C5O68_08860;Dbxref=NCBI_GP:RJP80329.1;Name=RJP80329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056000.1;locus_tag=C5O68_08860;product=XRE family transcriptional regulator;protein_id=RJP80329.1;transl_table=11 PTQV01000056.1 Genbank gene 8636 9586 . - . ID=gene-C5O68_08865;Name=C5O68_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08865 PTQV01000056.1 Protein Homology CDS 8636 9586 . - 0 ID=cds-RJP80330.1;Parent=gene-C5O68_08865;Dbxref=NCBI_GP:RJP80330.1;Name=RJP80330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359346.1;locus_tag=C5O68_08865;product=autolysin;protein_id=RJP80330.1;transl_table=11 PTQV01000056.1 Genbank gene 9962 11332 . - . ID=gene-C5O68_08870;Name=C5O68_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08870 PTQV01000056.1 Protein Homology CDS 9962 11332 . - 0 ID=cds-RJP80331.1;Parent=gene-C5O68_08870;Dbxref=NCBI_GP:RJP80331.1;Name=RJP80331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359348.1;locus_tag=C5O68_08870;product=MATE family efflux transporter;protein_id=RJP80331.1;transl_table=11 PTQV01000056.1 Genbank gene 11447 12613 . - . ID=gene-C5O68_08875;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=C5O68_08875 PTQV01000056.1 Protein Homology CDS 11447 12613 . - 0 ID=cds-RJP80332.1;Parent=gene-C5O68_08875;Dbxref=NCBI_GP:RJP80332.1;Name=RJP80332.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359349.1;locus_tag=C5O68_08875;product=recombinase RecA;protein_id=RJP80332.1;transl_table=11 PTQV01000056.1 Genbank gene 12668 13924 . - . ID=gene-C5O68_08880;Name=C5O68_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08880 PTQV01000056.1 Protein Homology CDS 12668 13924 . - 0 ID=cds-RJP80333.1;Parent=gene-C5O68_08880;Dbxref=NCBI_GP:RJP80333.1;Name=RJP80333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446940.1;locus_tag=C5O68_08880;product=competence/damage-inducible protein A;protein_id=RJP80333.1;transl_table=11 PTQV01000056.1 Genbank gene 14008 15024 . - . ID=gene-C5O68_08885;Name=C5O68_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08885 PTQV01000056.1 Protein Homology CDS 14008 15024 . - 0 ID=cds-RJP80334.1;Parent=gene-C5O68_08885;Dbxref=NCBI_GP:RJP80334.1;Name=RJP80334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359351.1;locus_tag=C5O68_08885;product=LytR family transcriptional regulator;protein_id=RJP80334.1;transl_table=11 PTQV01000056.1 Genbank gene 15032 15550 . - . ID=gene-C5O68_08890;Name=C5O68_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08890 PTQV01000056.1 Protein Homology CDS 15032 15550 . - 0 ID=cds-RJP80335.1;Parent=gene-C5O68_08890;Dbxref=NCBI_GP:RJP80335.1;Name=RJP80335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446942.1;locus_tag=C5O68_08890;product=GNAT family N-acetyltransferase;protein_id=RJP80335.1;transl_table=11 PTQV01000056.1 Genbank gene 15540 15983 . - . ID=gene-C5O68_08895;Name=C5O68_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08895 PTQV01000056.1 Protein Homology CDS 15540 15983 . - 0 ID=cds-RJP80336.1;Parent=gene-C5O68_08895;Dbxref=NCBI_GP:RJP80336.1;Name=RJP80336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359353.1;locus_tag=C5O68_08895;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=RJP80336.1;transl_table=11 PTQV01000056.1 Genbank gene 16173 16793 . - . ID=gene-C5O68_08900;Name=C5O68_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08900 PTQV01000056.1 Protein Homology CDS 16173 16793 . - 0 ID=cds-RJP80337.1;Parent=gene-C5O68_08900;Dbxref=NCBI_GP:RJP80337.1;Name=RJP80337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359354.1;locus_tag=C5O68_08900;product=hypothetical protein;protein_id=RJP80337.1;transl_table=11 PTQV01000056.1 Genbank gene 16924 17010 . - . ID=gene-C5O68_08905;Name=C5O68_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08905 PTQV01000056.1 Protein Homology CDS 16924 17010 . - 0 ID=cds-RJP80349.1;Parent=gene-C5O68_08905;Dbxref=NCBI_GP:RJP80349.1;Name=RJP80349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_08905;product=DNA alkylation repair protein;protein_id=RJP80349.1;transl_table=11 PTQV01000056.1 Genbank gene 17111 17503 . - . ID=gene-C5O68_08910;Name=C5O68_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08910 PTQV01000056.1 Protein Homology CDS 17111 17503 . - 0 ID=cds-RJP80338.1;Parent=gene-C5O68_08910;Dbxref=NCBI_GP:RJP80338.1;Name=RJP80338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=C5O68_08910;product=30S ribosomal protein S9;protein_id=RJP80338.1;transl_table=11 PTQV01000056.1 Genbank gene 17523 17969 . - . ID=gene-C5O68_08915;Name=C5O68_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08915 PTQV01000056.1 Protein Homology CDS 17523 17969 . - 0 ID=cds-RJP80339.1;Parent=gene-C5O68_08915;Dbxref=NCBI_GP:RJP80339.1;Name=RJP80339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357865.1;locus_tag=C5O68_08915;product=50S ribosomal protein L13;protein_id=RJP80339.1;transl_table=11 PTQV01000056.1 Genbank gene 18324 18641 . + . ID=gene-C5O68_08920;Name=C5O68_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08920 PTQV01000056.1 Protein Homology CDS 18324 18641 . + 0 ID=cds-RJP80340.1;Parent=gene-C5O68_08920;Dbxref=NCBI_GP:RJP80340.1;Name=RJP80340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445423.1;locus_tag=C5O68_08920;product=GTP cyclohydrolase;protein_id=RJP80340.1;transl_table=11 PTQV01000056.1 Genbank gene 18792 19604 . - . ID=gene-C5O68_08925;Name=C5O68_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08925 PTQV01000056.1 Protein Homology CDS 18792 19604 . - 0 ID=cds-RJP80341.1;Parent=gene-C5O68_08925;Dbxref=NCBI_GP:RJP80341.1;Name=RJP80341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445422.1;locus_tag=C5O68_08925;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=RJP80341.1;transl_table=11 PTQV01000056.1 Genbank gene 19763 20317 . - . ID=gene-C5O68_08930;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=C5O68_08930 PTQV01000056.1 Protein Homology CDS 19763 20317 . - 0 ID=cds-RJP80342.1;Parent=gene-C5O68_08930;Dbxref=NCBI_GP:RJP80342.1;Name=RJP80342.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445421.1;locus_tag=C5O68_08930;product=GTP cyclohydrolase I FolE;protein_id=RJP80342.1;transl_table=11 PTQV01000056.1 Genbank gene 20298 21620 . - . ID=gene-C5O68_08935;Name=C5O68_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08935 PTQV01000056.1 Protein Homology CDS 20298 21620 . - 0 ID=cds-RJP80343.1;Parent=gene-C5O68_08935;Dbxref=NCBI_GP:RJP80343.1;Name=RJP80343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357861.1;locus_tag=C5O68_08935;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=RJP80343.1;transl_table=11 PTQV01000056.1 Genbank gene 21622 22566 . - . ID=gene-C5O68_08940;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=C5O68_08940 PTQV01000056.1 Protein Homology CDS 21622 22566 . - 0 ID=cds-RJP80350.1;Parent=gene-C5O68_08940;Dbxref=NCBI_GP:RJP80350.1;Name=RJP80350.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357860.1;locus_tag=C5O68_08940;product=dihydropteroate synthase;protein_id=RJP80350.1;transl_table=11 PTQV01000056.1 Genbank gene 22690 23400 . - . ID=gene-C5O68_08945;Name=C5O68_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08945 PTQV01000056.1 Protein Homology CDS 22690 23400 . - 0 ID=cds-RJP80344.1;Parent=gene-C5O68_08945;Dbxref=NCBI_GP:RJP80344.1;Name=RJP80344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445418.1;locus_tag=C5O68_08945;product=CPBP family intramembrane metalloprotease;protein_id=RJP80344.1;transl_table=11 PTQV01000056.1 Genbank gene 23450 24868 . - . ID=gene-C5O68_08950;Name=C5O68_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08950 PTQV01000056.1 Protein Homology CDS 23450 24868 . - 0 ID=cds-RJP80345.1;Parent=gene-C5O68_08950;Dbxref=NCBI_GP:RJP80345.1;Name=RJP80345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445417.1;locus_tag=C5O68_08950;product=NCS2 family permease;protein_id=RJP80345.1;transl_table=11 PTQV01000056.1 Genbank gene 25058 25870 . + . ID=gene-C5O68_08955;Name=C5O68_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08955 PTQV01000056.1 Protein Homology CDS 25058 25870 . + 0 ID=cds-RJP80346.1;Parent=gene-C5O68_08955;Dbxref=NCBI_GP:RJP80346.1;Name=RJP80346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357857.1;locus_tag=C5O68_08955;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP80346.1;transl_table=11 PTQV01000056.1 Genbank gene 25906 25998 . - . ID=gene-C5O68_08960;Name=C5O68_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08960 PTQV01000056.1 Protein Homology CDS 25906 25998 . - 0 ID=cds-RJP80351.1;Parent=gene-C5O68_08960;Dbxref=NCBI_GP:RJP80351.1;Name=RJP80351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_08960;product=DNA alkylation repair protein;protein_id=RJP80351.1;transl_table=11 PTQV01000056.1 Genbank pseudogene 26050 26283 . - . ID=gene-C5O68_08965;Name=C5O68_08965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08965;pseudo=true PTQV01000056.1 Protein Homology CDS 26050 26283 . - 0 ID=cds-C5O68_08965;Parent=gene-C5O68_08965;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_08965;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000057.1 1 20576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000057.1 Genbank region 1 20576 . + . ID=PTQV01000057.1:1..20576;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000057.1 Genbank pseudogene 46 123 . - . ID=gene-C5O68_08970;Name=C5O68_08970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08970;pseudo=true PTQV01000057.1 Protein Homology CDS 46 123 . - 0 ID=cds-C5O68_08970;Parent=gene-C5O68_08970;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397737.1;locus_tag=C5O68_08970;product=DNA alkylation repair protein;pseudo=true;transl_table=11 PTQV01000057.1 Genbank gene 199 1812 . - . ID=gene-C5O68_08975;Name=C5O68_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08975 PTQV01000057.1 Protein Homology CDS 199 1812 . - 0 ID=cds-RJP80249.1;Parent=gene-C5O68_08975;Dbxref=NCBI_GP:RJP80249.1;Name=RJP80249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359176.1;locus_tag=C5O68_08975;product=ribonuclease Y;protein_id=RJP80249.1;transl_table=11 PTQV01000057.1 Genbank gene 1864 2184 . - . ID=gene-C5O68_08980;Name=C5O68_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08980 PTQV01000057.1 Protein Homology CDS 1864 2184 . - 0 ID=cds-RJP80250.1;Parent=gene-C5O68_08980;Dbxref=NCBI_GP:RJP80250.1;Name=RJP80250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451507.1;locus_tag=C5O68_08980;product=recombinase;protein_id=RJP80250.1;transl_table=11 PTQV01000057.1 Genbank gene 2285 3070 . - . ID=gene-C5O68_08985;Name=C5O68_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08985 PTQV01000057.1 Protein Homology CDS 2285 3070 . - 0 ID=cds-RJP80251.1;Parent=gene-C5O68_08985;Dbxref=NCBI_GP:RJP80251.1;Name=RJP80251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669600.1;locus_tag=C5O68_08985;product=hypothetical protein;protein_id=RJP80251.1;transl_table=11 PTQV01000057.1 Genbank pseudogene 3168 3668 . - . ID=gene-C5O68_08990;Name=C5O68_08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_08990;pseudo=true PTQV01000057.1 Protein Homology CDS 3168 3668 . - 0 ID=cds-C5O68_08990;Parent=gene-C5O68_08990;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121325.1;locus_tag=C5O68_08990;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000057.1 Genbank gene 3680 3814 . - . ID=gene-C5O68_08995;Name=C5O68_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_08995 PTQV01000057.1 Protein Homology CDS 3680 3814 . - 0 ID=cds-RJP80252.1;Parent=gene-C5O68_08995;Dbxref=NCBI_GP:RJP80252.1;Name=RJP80252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001815749.1;locus_tag=C5O68_08995;product=restriction endonuclease;protein_id=RJP80252.1;transl_table=11 PTQV01000057.1 Genbank gene 4030 4284 . - . ID=gene-C5O68_09000;Name=C5O68_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09000 PTQV01000057.1 Protein Homology CDS 4030 4284 . - 0 ID=cds-RJP80253.1;Parent=gene-C5O68_09000;Dbxref=NCBI_GP:RJP80253.1;Name=RJP80253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359177.1;locus_tag=C5O68_09000;product=Txe/YoeB family addiction module toxin;protein_id=RJP80253.1;transl_table=11 PTQV01000057.1 Genbank gene 4288 4581 . - . ID=gene-C5O68_09005;Name=C5O68_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09005 PTQV01000057.1 Protein Homology CDS 4288 4581 . - 0 ID=cds-RJP80254.1;Parent=gene-C5O68_09005;Dbxref=NCBI_GP:RJP80254.1;Name=RJP80254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359178.1;locus_tag=C5O68_09005;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=RJP80254.1;transl_table=11 PTQV01000057.1 Genbank gene 4674 5771 . - . ID=gene-C5O68_09010;Name=C5O68_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09010 PTQV01000057.1 Protein Homology CDS 4674 5771 . - 0 ID=cds-RJP80255.1;Parent=gene-C5O68_09010;Dbxref=NCBI_GP:RJP80255.1;Name=RJP80255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359179.1;locus_tag=C5O68_09010;product=nucleotidyltransferase;protein_id=RJP80255.1;transl_table=11 PTQV01000057.1 Genbank gene 5781 6527 . - . ID=gene-C5O68_09015;Name=C5O68_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09015 PTQV01000057.1 Protein Homology CDS 5781 6527 . - 0 ID=cds-RJP80256.1;Parent=gene-C5O68_09015;Dbxref=NCBI_GP:RJP80256.1;Name=RJP80256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446735.1;locus_tag=C5O68_09015;product=SAM-dependent methyltransferase;protein_id=RJP80256.1;transl_table=11 PTQV01000057.1 Genbank gene 6632 6985 . - . ID=gene-C5O68_09020;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=C5O68_09020 PTQV01000057.1 Protein Homology CDS 6632 6985 . - 0 ID=cds-RJP80257.1;Parent=gene-C5O68_09020;Dbxref=NCBI_GP:RJP80257.1;Name=RJP80257.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359181.1;locus_tag=C5O68_09020;product=ribosome silencing factor;protein_id=RJP80257.1;transl_table=11 PTQV01000057.1 Genbank gene 6998 7498 . - . ID=gene-C5O68_09025;Name=C5O68_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09025 PTQV01000057.1 Protein Homology CDS 6998 7498 . - 0 ID=cds-RJP80258.1;Parent=gene-C5O68_09025;Dbxref=NCBI_GP:RJP80258.1;Name=RJP80258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359182.1;locus_tag=C5O68_09025;product=cysteine hydrolase;protein_id=RJP80258.1;transl_table=11 PTQV01000057.1 Genbank gene 7499 8092 . - . ID=gene-C5O68_09030;Name=C5O68_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09030 PTQV01000057.1 Protein Homology CDS 7499 8092 . - 0 ID=cds-RJP80259.1;Parent=gene-C5O68_09030;Dbxref=NCBI_GP:RJP80259.1;Name=RJP80259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359183.1;locus_tag=C5O68_09030;product=HD domain-containing protein;protein_id=RJP80259.1;transl_table=11 PTQV01000057.1 Genbank gene 8092 8721 . - . ID=gene-C5O68_09035;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=C5O68_09035 PTQV01000057.1 Protein Homology CDS 8092 8721 . - 0 ID=cds-RJP80260.1;Parent=gene-C5O68_09035;Dbxref=NCBI_GP:RJP80260.1;Name=RJP80260.1;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;gbkey=CDS;gene=nadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359184.1;locus_tag=C5O68_09035;product=nicotinate-nucleotide adenylyltransferase;protein_id=RJP80260.1;transl_table=11 PTQV01000057.1 Genbank gene 8773 9084 . - . ID=gene-C5O68_09040;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=C5O68_09040 PTQV01000057.1 Protein Homology CDS 8773 9084 . - 0 ID=cds-RJP80261.1;Parent=gene-C5O68_09040;Dbxref=NCBI_GP:RJP80261.1;Name=RJP80261.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359185.1;locus_tag=C5O68_09040;product=ribosome assembly RNA-binding protein YhbY;protein_id=RJP80261.1;transl_table=11 PTQV01000057.1 Genbank gene 9298 10404 . - . ID=gene-C5O68_09045;Name=C5O68_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09045 PTQV01000057.1 Protein Homology CDS 9298 10404 . - 0 ID=cds-RJP80262.1;Parent=gene-C5O68_09045;Dbxref=NCBI_GP:RJP80262.1;Name=RJP80262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446741.1;locus_tag=C5O68_09045;product=ribosome biogenesis GTPase YqeH;protein_id=RJP80262.1;transl_table=11 PTQV01000057.1 Genbank gene 10407 10997 . - . ID=gene-C5O68_09050;Name=C5O68_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09050 PTQV01000057.1 Protein Homology CDS 10407 10997 . - 0 ID=cds-RJP80263.1;Parent=gene-C5O68_09050;Dbxref=NCBI_GP:RJP80263.1;Name=RJP80263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359187.1;locus_tag=C5O68_09050;product=YqeG family HAD IIIA-type phosphatase;protein_id=RJP80263.1;transl_table=11 PTQV01000057.1 Genbank gene 10949 11857 . - . ID=gene-C5O68_09055;Name=C5O68_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09055 PTQV01000057.1 Protein Homology CDS 10949 11857 . - 0 ID=cds-RJP80264.1;Parent=gene-C5O68_09055;Dbxref=NCBI_GP:RJP80264.1;Name=RJP80264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359188.1;locus_tag=C5O68_09055;product=magnesium transporter CorA family protein;protein_id=RJP80264.1;transl_table=11 PTQV01000057.1 Genbank gene 11915 12520 . - . ID=gene-C5O68_09060;Name=C5O68_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09060 PTQV01000057.1 Protein Homology CDS 11915 12520 . - 0 ID=cds-RJP80265.1;Parent=gene-C5O68_09060;Dbxref=NCBI_GP:RJP80265.1;Name=RJP80265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359189.1;locus_tag=C5O68_09060;product=mechanosensitive ion channel family protein;protein_id=RJP80265.1;transl_table=11 PTQV01000057.1 Genbank gene 12614 13819 . + . ID=gene-C5O68_09065;Name=C5O68_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09065 PTQV01000057.1 Protein Homology CDS 12614 13819 . + 0 ID=cds-RJP80266.1;Parent=gene-C5O68_09065;Dbxref=NCBI_GP:RJP80266.1;Name=RJP80266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446745.1;locus_tag=C5O68_09065;product=serine/threonine transporter SstT;protein_id=RJP80266.1;transl_table=11 PTQV01000057.1 Genbank gene 13886 14854 . + . ID=gene-C5O68_09070;Name=C5O68_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09070 PTQV01000057.1 Protein Homology CDS 13886 14854 . + 0 ID=cds-RJP80267.1;Parent=gene-C5O68_09070;Dbxref=NCBI_GP:RJP80267.1;Name=RJP80267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028167.1;locus_tag=C5O68_09070;product=aromatic acid exporter family protein;protein_id=RJP80267.1;transl_table=11 PTQV01000057.1 Genbank gene 14981 15361 . + . ID=gene-C5O68_09075;Name=C5O68_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09075 PTQV01000057.1 Protein Homology CDS 14981 15361 . + 0 ID=cds-RJP80268.1;Parent=gene-C5O68_09075;Dbxref=NCBI_GP:RJP80268.1;Name=RJP80268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221621.1;locus_tag=C5O68_09075;product=MarR family transcriptional regulator;protein_id=RJP80268.1;transl_table=11 PTQV01000057.1 Genbank gene 15459 15680 . + . ID=gene-C5O68_09080;Name=C5O68_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09080 PTQV01000057.1 Protein Homology CDS 15459 15680 . + 0 ID=cds-RJP80269.1;Parent=gene-C5O68_09080;Dbxref=NCBI_GP:RJP80269.1;Name=RJP80269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445691.1;locus_tag=C5O68_09080;product=DUF4649 domain-containing protein;protein_id=RJP80269.1;transl_table=11 PTQV01000057.1 Genbank gene 15696 16010 . + . ID=gene-C5O68_09085;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=C5O68_09085 PTQV01000057.1 Protein Homology CDS 15696 16010 . + 0 ID=cds-RJP80270.1;Parent=gene-C5O68_09085;Dbxref=NCBI_GP:RJP80270.1;Name=RJP80270.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445690.1;locus_tag=C5O68_09085;product=thioredoxin;protein_id=RJP80270.1;transl_table=11 PTQV01000057.1 Genbank gene 16212 16865 . + . ID=gene-C5O68_09090;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=C5O68_09090 PTQV01000057.1 Protein Homology CDS 16212 16865 . + 0 ID=cds-RJP80271.1;Parent=gene-C5O68_09090;Dbxref=NCBI_GP:RJP80271.1;Name=RJP80271.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445689.1;locus_tag=C5O68_09090;product=7-cyano-7-deazaguanine synthase QueC;protein_id=RJP80271.1;transl_table=11 PTQV01000057.1 Genbank gene 16865 17308 . + . ID=gene-C5O68_09095;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=C5O68_09095 PTQV01000057.1 Protein Homology CDS 16865 17308 . + 0 ID=cds-RJP80272.1;Parent=gene-C5O68_09095;Dbxref=NCBI_GP:RJP80272.1;Name=RJP80272.1;gbkey=CDS;gene=queD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445688.1;locus_tag=C5O68_09095;product=6-carboxytetrahydropterin synthase QueD;protein_id=RJP80272.1;transl_table=11 PTQV01000057.1 Genbank gene 17301 18017 . + . ID=gene-C5O68_09100;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=C5O68_09100 PTQV01000057.1 Protein Homology CDS 17301 18017 . + 0 ID=cds-RJP80273.1;Parent=gene-C5O68_09100;Dbxref=NCBI_GP:RJP80273.1;Name=RJP80273.1;gbkey=CDS;gene=queE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445687.1;locus_tag=C5O68_09100;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=RJP80273.1;transl_table=11 PTQV01000057.1 Genbank gene 18037 18528 . + . ID=gene-C5O68_09105;Name=C5O68_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09105 PTQV01000057.1 Protein Homology CDS 18037 18528 . + 0 ID=cds-RJP80274.1;Parent=gene-C5O68_09105;Dbxref=NCBI_GP:RJP80274.1;Name=RJP80274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445686.1;locus_tag=C5O68_09105;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=RJP80274.1;transl_table=11 PTQV01000057.1 Genbank gene 18746 19414 . - . ID=gene-C5O68_09110;Name=C5O68_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09110 PTQV01000057.1 Protein Homology CDS 18746 19414 . - 0 ID=cds-RJP80275.1;Parent=gene-C5O68_09110;Dbxref=NCBI_GP:RJP80275.1;Name=RJP80275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445685.1;locus_tag=C5O68_09110;product=aquaporin;protein_id=RJP80275.1;transl_table=11 PTQV01000057.1 Genbank pseudogene 19520 20310 . - . ID=gene-C5O68_09115;Name=C5O68_09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09115;pseudo=true PTQV01000057.1 Protein Homology CDS 19520 20310 . - 0 ID=cds-C5O68_09115;Parent=gene-C5O68_09115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445683.1;locus_tag=C5O68_09115;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000058.1 1 38244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000058.1 Genbank region 1 38244 . + . ID=PTQV01000058.1:1..38244;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000058.1 Genbank gene 321 1319 . + . ID=gene-C5O68_09120;Name=C5O68_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09120 PTQV01000058.1 Protein Homology CDS 321 1319 . + 0 ID=cds-RJP80100.1;Parent=gene-C5O68_09120;Dbxref=NCBI_GP:RJP80100.1;Name=RJP80100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357832.1;locus_tag=C5O68_09120;product=Holliday junction branch migration DNA helicase RuvB;protein_id=RJP80100.1;transl_table=11 PTQV01000058.1 Genbank gene 1300 1872 . + . ID=gene-C5O68_09125;Name=C5O68_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09125 PTQV01000058.1 Protein Homology CDS 1300 1872 . + 0 ID=cds-RJP80101.1;Parent=gene-C5O68_09125;Dbxref=NCBI_GP:RJP80101.1;Name=RJP80101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357833.1;locus_tag=C5O68_09125;product=hypothetical protein;protein_id=RJP80101.1;transl_table=11 PTQV01000058.1 Genbank gene 2057 2176 . - . ID=gene-C5O68_09130;Name=C5O68_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09130 PTQV01000058.1 Protein Homology CDS 2057 2176 . - 0 ID=cds-RJP80122.1;Parent=gene-C5O68_09130;Dbxref=NCBI_GP:RJP80122.1;Name=RJP80122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001812734.1;locus_tag=C5O68_09130;product=DNA alkylation repair protein;protein_id=RJP80122.1;transl_table=11 PTQV01000058.1 Genbank gene 2219 2977 . + . ID=gene-C5O68_09135;Name=C5O68_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09135 PTQV01000058.1 Protein Homology CDS 2219 2977 . + 0 ID=cds-RJP80102.1;Parent=gene-C5O68_09135;Dbxref=NCBI_GP:RJP80102.1;Name=RJP80102.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446955.1;locus_tag=C5O68_09135;product=isoprenyl transferase;protein_id=RJP80102.1;transl_table=11 PTQV01000058.1 Genbank gene 2986 3789 . + . ID=gene-C5O68_09140;Name=C5O68_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09140 PTQV01000058.1 Protein Homology CDS 2986 3789 . + 0 ID=cds-RJP80103.1;Parent=gene-C5O68_09140;Dbxref=NCBI_GP:RJP80103.1;Name=RJP80103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357835.1;locus_tag=C5O68_09140;product=phosphatidate cytidylyltransferase;protein_id=RJP80103.1;transl_table=11 PTQV01000058.1 Genbank gene 3811 5070 . + . ID=gene-C5O68_09145;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=C5O68_09145 PTQV01000058.1 Protein Homology CDS 3811 5070 . + 0 ID=cds-RJP80104.1;Parent=gene-C5O68_09145;Dbxref=NCBI_GP:RJP80104.1;Name=RJP80104.1;gbkey=CDS;gene=rseP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357836.1;locus_tag=C5O68_09145;product=RIP metalloprotease RseP;protein_id=RJP80104.1;transl_table=11 PTQV01000058.1 Genbank gene 5083 6936 . + . ID=gene-C5O68_09150;Name=C5O68_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09150 PTQV01000058.1 Protein Homology CDS 5083 6936 . + 0 ID=cds-RJP80105.1;Parent=gene-C5O68_09150;Dbxref=NCBI_GP:RJP80105.1;Name=RJP80105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357837.1;locus_tag=C5O68_09150;product=proline--tRNA ligase;protein_id=RJP80105.1;transl_table=11 PTQV01000058.1 Genbank gene 7035 8414 . + . ID=gene-C5O68_09155;Name=C5O68_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09155 PTQV01000058.1 Protein Homology CDS 7035 8414 . + 0 ID=cds-RJP80106.1;Parent=gene-C5O68_09155;Dbxref=NCBI_GP:RJP80106.1;Name=RJP80106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357838.1;locus_tag=C5O68_09155;product=6-phospho-beta-glucosidase;protein_id=RJP80106.1;transl_table=11 PTQV01000058.1 Genbank gene 8608 10416 . + . ID=gene-C5O68_09160;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=C5O68_09160 PTQV01000058.1 Protein Homology CDS 8608 10416 . + 0 ID=cds-RJP80107.1;Parent=gene-C5O68_09160;Dbxref=NCBI_GP:RJP80107.1;Name=RJP80107.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357839.1;locus_tag=C5O68_09160;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=RJP80107.1;transl_table=11 PTQV01000058.1 Genbank gene 10861 12630 . + . ID=gene-C5O68_09165;Name=C5O68_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09165 PTQV01000058.1 Protein Homology CDS 10861 12630 . + 0 ID=cds-RJP80108.1;Parent=gene-C5O68_09165;Dbxref=NCBI_GP:RJP80108.1;Name=RJP80108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357950.1;locus_tag=C5O68_09165;product=PTS mannitol transporter subunit IIB;protein_id=RJP80108.1;transl_table=11 PTQV01000058.1 Genbank gene 12654 14609 . + . ID=gene-C5O68_09170;Name=C5O68_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09170 PTQV01000058.1 Protein Homology CDS 12654 14609 . + 0 ID=cds-RJP80109.1;Parent=gene-C5O68_09170;Dbxref=NCBI_GP:RJP80109.1;Name=RJP80109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357951.1;locus_tag=C5O68_09170;product=phosphotransferase;protein_id=RJP80109.1;transl_table=11 PTQV01000058.1 Genbank gene 14611 15048 . + . ID=gene-C5O68_09175;Name=C5O68_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09175 PTQV01000058.1 Protein Homology CDS 14611 15048 . + 0 ID=cds-RJP80110.1;Parent=gene-C5O68_09175;Dbxref=NCBI_GP:RJP80110.1;Name=RJP80110.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357952.1;locus_tag=C5O68_09175;product=PTS mannitol transporter subunit IIA;protein_id=RJP80110.1;transl_table=11 PTQV01000058.1 Genbank gene 15110 16246 . + . ID=gene-C5O68_09180;Name=C5O68_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09180 PTQV01000058.1 Protein Homology CDS 15110 16246 . + 0 ID=cds-RJP80111.1;Parent=gene-C5O68_09180;Dbxref=NCBI_GP:RJP80111.1;Name=RJP80111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357953.1;locus_tag=C5O68_09180;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=RJP80111.1;transl_table=11 PTQV01000058.1 Genbank gene 16453 17502 . + . ID=gene-C5O68_09185;Name=C5O68_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09185 PTQV01000058.1 Protein Homology CDS 16453 17502 . + 0 ID=cds-RJP80112.1;Parent=gene-C5O68_09185;Dbxref=NCBI_GP:RJP80112.1;Name=RJP80112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446949.1;locus_tag=C5O68_09185;product=LLM class flavin-dependent oxidoreductase;protein_id=RJP80112.1;transl_table=11 PTQV01000058.1 Genbank gene 17754 17999 . - . ID=gene-C5O68_09190;Name=C5O68_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09190 PTQV01000058.1 Protein Homology CDS 17754 17999 . - 0 ID=cds-RJP80123.1;Parent=gene-C5O68_09190;Dbxref=NCBI_GP:RJP80123.1;Name=RJP80123.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01473.18;locus_tag=C5O68_09190;product=hypothetical protein;protein_id=RJP80123.1;transl_table=11 PTQV01000058.1 Genbank pseudogene 18056 21875 . - . ID=gene-C5O68_09195;Name=C5O68_09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09195;pseudo=true PTQV01000058.1 Protein Homology CDS 18056 21875 . - 0 ID=cds-C5O68_09195;Parent=gene-C5O68_09195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446948.1;locus_tag=C5O68_09195;product=pullulanase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank pseudogene 22457 22960 . + . ID=gene-C5O68_09200;Name=C5O68_09200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09200;pseudo=true PTQV01000058.1 Protein Homology CDS 22457 22960 . + 0 ID=cds-C5O68_09200;Parent=gene-C5O68_09200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071074.1;locus_tag=C5O68_09200;product=thiol-activated cytolysin;pseudo=true;transl_table=11 PTQV01000058.1 Genbank gene 23214 24605 . + . ID=gene-C5O68_09205;Name=C5O68_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09205 PTQV01000058.1 Protein Homology CDS 23214 24605 . + 0 ID=cds-RJP80124.1;Parent=gene-C5O68_09205;Dbxref=NCBI_GP:RJP80124.1;Name=RJP80124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284359.1;locus_tag=C5O68_09205;product=thiol-activated cytolysin;protein_id=RJP80124.1;transl_table=11 PTQV01000058.1 Genbank pseudogene 24708 24791 . - . ID=gene-C5O68_09210;Name=C5O68_09210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09210;pseudo=true PTQV01000058.1 Protein Homology CDS 24708 24791 . - 0 ID=cds-C5O68_09210;Parent=gene-C5O68_09210;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=C5O68_09210;product=cytidylate kinase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank pseudogene 24863 25024 . - . ID=gene-C5O68_09215;Name=C5O68_09215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09215;pseudo=true PTQV01000058.1 Protein Homology CDS 24863 25024 . - 0 ID=cds-C5O68_09215;Parent=gene-C5O68_09215;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000163009.1;locus_tag=C5O68_09215;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank pseudogene 25220 25313 . + . ID=gene-C5O68_09220;Name=C5O68_09220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09220;pseudo=true PTQV01000058.1 Protein Homology CDS 25220 25313 . + 0 ID=cds-C5O68_09220;Parent=gene-C5O68_09220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036030.1;locus_tag=C5O68_09220;product=D-fructose-6-phosphate amidotransferase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank gene 25300 25713 . + . ID=gene-C5O68_09225;Name=C5O68_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09225 PTQV01000058.1 Protein Homology CDS 25300 25713 . + 0 ID=cds-RJP80113.1;Parent=gene-C5O68_09225;Dbxref=NCBI_GP:RJP80113.1;Name=RJP80113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=C5O68_09225;product=30S ribosomal protein S12;protein_id=RJP80113.1;transl_table=11 PTQV01000058.1 Genbank gene 25733 26203 . + . ID=gene-C5O68_09230;Name=C5O68_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09230 PTQV01000058.1 Protein Homology CDS 25733 26203 . + 0 ID=cds-RJP80114.1;Parent=gene-C5O68_09230;Dbxref=NCBI_GP:RJP80114.1;Name=RJP80114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011285383.1;locus_tag=C5O68_09230;product=30S ribosomal protein S7;protein_id=RJP80114.1;transl_table=11 PTQV01000058.1 Genbank gene 26482 28563 . + . ID=gene-C5O68_09235;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=C5O68_09235 PTQV01000058.1 Protein Homology CDS 26482 28563 . + 0 ID=cds-RJP80115.1;Parent=gene-C5O68_09235;Dbxref=NCBI_GP:RJP80115.1;Name=RJP80115.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357844.1;locus_tag=C5O68_09235;product=elongation factor G;protein_id=RJP80115.1;transl_table=11 PTQV01000058.1 Genbank gene 28667 33058 . + . ID=gene-C5O68_09240;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=C5O68_09240 PTQV01000058.1 Protein Homology CDS 28667 33058 . + 0 ID=cds-RJP80116.1;Parent=gene-C5O68_09240;Dbxref=NCBI_GP:RJP80116.1;Name=RJP80116.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity;gbkey=CDS;gene=polC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357845.1;locus_tag=C5O68_09240;product=PolC-type DNA polymerase III;protein_id=RJP80116.1;transl_table=11 PTQV01000058.1 Genbank gene 33096 33797 . + . ID=gene-C5O68_09245;Name=C5O68_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09245 PTQV01000058.1 Protein Homology CDS 33096 33797 . + 0 ID=cds-RJP80117.1;Parent=gene-C5O68_09245;Dbxref=NCBI_GP:RJP80117.1;Name=RJP80117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000970259.1;locus_tag=C5O68_09245;product=hypothetical protein;protein_id=RJP80117.1;transl_table=11 PTQV01000058.1 Genbank gene 33811 33963 . + . ID=gene-C5O68_09250;Name=C5O68_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09250 PTQV01000058.1 Protein Homology CDS 33811 33963 . + 0 ID=cds-RJP80125.1;Parent=gene-C5O68_09250;Dbxref=NCBI_GP:RJP80125.1;Name=RJP80125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008869148.1;locus_tag=C5O68_09250;product=hypothetical protein;protein_id=RJP80125.1;transl_table=11 PTQV01000058.1 Genbank gene 33985 35226 . + . ID=gene-C5O68_09255;Name=C5O68_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09255 PTQV01000058.1 Protein Homology CDS 33985 35226 . + 0 ID=cds-RJP80118.1;Parent=gene-C5O68_09255;Dbxref=NCBI_GP:RJP80118.1;Name=RJP80118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357848.1;locus_tag=C5O68_09255;product=aminopeptidase;protein_id=RJP80118.1;transl_table=11 PTQV01000058.1 Genbank gene 35236 35466 . + . ID=gene-C5O68_09260;Name=C5O68_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09260 PTQV01000058.1 Protein Homology CDS 35236 35466 . + 0 ID=cds-RJP80119.1;Parent=gene-C5O68_09260;Dbxref=NCBI_GP:RJP80119.1;Name=RJP80119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357849.1;locus_tag=C5O68_09260;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=RJP80119.1;transl_table=11 PTQV01000058.1 Genbank pseudogene 35487 35561 . + . ID=gene-C5O68_09265;Name=C5O68_09265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09265;pseudo=true PTQV01000058.1 Protein Homology CDS 35487 35561 . + 0 ID=cds-C5O68_09265;Parent=gene-C5O68_09265;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_09265;product=chlorohydrolase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank gene 35914 36636 . + . ID=gene-C5O68_09270;Name=C5O68_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09270 PTQV01000058.1 Protein Homology CDS 35914 36636 . + 0 ID=cds-RJP80120.1;Parent=gene-C5O68_09270;Dbxref=NCBI_GP:RJP80120.1;Name=RJP80120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357850.1;locus_tag=C5O68_09270;product=16S rRNA pseudouridine(516) synthase;protein_id=RJP80120.1;transl_table=11 PTQV01000058.1 Genbank pseudogene 36680 36748 . - . ID=gene-C5O68_09275;Name=C5O68_09275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09275;pseudo=true PTQV01000058.1 Protein Homology CDS 36680 36748 . - 0 ID=cds-C5O68_09275;Parent=gene-C5O68_09275;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_09275;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000058.1 Genbank gene 36854 38188 . + . ID=gene-C5O68_09280;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=C5O68_09280 PTQV01000058.1 Protein Homology CDS 36854 38188 . + 0 ID=cds-RJP80121.1;Parent=gene-C5O68_09280;Dbxref=NCBI_GP:RJP80121.1;Name=RJP80121.1;gbkey=CDS;gene=pepC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357852.1;locus_tag=C5O68_09280;product=aminopeptidase C;protein_id=RJP80121.1;transl_table=11 ##sequence-region PTQV01000059.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000059.1 Genbank region 1 528 . + . ID=PTQV01000059.1:1..528;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000059.1 Genbank gene 1 528 . - . ID=gene-C5O68_09285;Name=C5O68_09285;end_range=528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09285;partial=true;start_range=.,1 PTQV01000059.1 GeneMarkS+ CDS 1 528 . - 2 ID=cds-RJP80049.1;Parent=gene-C5O68_09285;Dbxref=NCBI_GP:RJP80049.1;Name=RJP80049.1;end_range=528,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_09285;partial=true;product=hypothetical protein;protein_id=RJP80049.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000005.1 1 46176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000005.1 Genbank region 1 46176 . + . ID=PTQV01000005.1:1..46176;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000005.1 Genbank gene 212 2209 . - . ID=gene-C5O68_01205;Name=C5O68_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01205 PTQV01000005.1 Protein Homology CDS 212 2209 . - 0 ID=cds-RJP84344.1;Parent=gene-C5O68_01205;Dbxref=NCBI_GP:RJP84344.1;Name=RJP84344.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358290.2;locus_tag=C5O68_01205;product=methionine--tRNA ligase;protein_id=RJP84344.1;transl_table=11 PTQV01000005.1 Genbank gene 2333 3592 . - . ID=gene-C5O68_01210;Name=C5O68_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01210 PTQV01000005.1 Protein Homology CDS 2333 3592 . - 0 ID=cds-RJP84345.1;Parent=gene-C5O68_01210;Dbxref=NCBI_GP:RJP84345.1;Name=RJP84345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358289.1;locus_tag=C5O68_01210;product=hypothetical protein;protein_id=RJP84345.1;transl_table=11 PTQV01000005.1 Genbank gene 3594 4295 . - . ID=gene-C5O68_01215;Name=C5O68_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01215 PTQV01000005.1 Protein Homology CDS 3594 4295 . - 0 ID=cds-RJP84346.1;Parent=gene-C5O68_01215;Dbxref=NCBI_GP:RJP84346.1;Name=RJP84346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358288.1;locus_tag=C5O68_01215;product=ABC transporter ATP-binding protein;protein_id=RJP84346.1;transl_table=11 PTQV01000005.1 Genbank gene 4279 5472 . - . ID=gene-C5O68_01220;Name=C5O68_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01220 PTQV01000005.1 Protein Homology CDS 4279 5472 . - 0 ID=cds-RJP84347.1;Parent=gene-C5O68_01220;Dbxref=NCBI_GP:RJP84347.1;Name=RJP84347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358287.1;locus_tag=C5O68_01220;product=efflux RND transporter periplasmic adaptor subunit;protein_id=RJP84347.1;transl_table=11 PTQV01000005.1 Genbank gene 5760 7106 . + . ID=gene-C5O68_01225;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=C5O68_01225 PTQV01000005.1 Protein Homology CDS 5760 7106 . + 0 ID=cds-RJP84348.1;Parent=gene-C5O68_01225;Dbxref=NCBI_GP:RJP84348.1;Name=RJP84348.1;gbkey=CDS;gene=gor;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358286.1;locus_tag=C5O68_01225;product=glutathione-disulfide reductase;protein_id=RJP84348.1;transl_table=11 PTQV01000005.1 Genbank gene 7302 7838 . + . ID=gene-C5O68_01230;Name=C5O68_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01230 PTQV01000005.1 Protein Homology CDS 7302 7838 . + 0 ID=cds-RJP84349.1;Parent=gene-C5O68_01230;Dbxref=NCBI_GP:RJP84349.1;Name=RJP84349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253081.1;locus_tag=C5O68_01230;product=biotin transporter BioY;protein_id=RJP84349.1;transl_table=11 PTQV01000005.1 Genbank gene 7892 8107 . - . ID=gene-C5O68_01235;Name=C5O68_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01235 PTQV01000005.1 Protein Homology CDS 7892 8107 . - 0 ID=cds-RJP84350.1;Parent=gene-C5O68_01235;Dbxref=NCBI_GP:RJP84350.1;Name=RJP84350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807422.1;locus_tag=C5O68_01235;product=hypothetical protein;protein_id=RJP84350.1;transl_table=11 PTQV01000005.1 Genbank gene 8206 8526 . + . ID=gene-C5O68_01240;Name=C5O68_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01240 PTQV01000005.1 Protein Homology CDS 8206 8526 . + 0 ID=cds-RJP84351.1;Parent=gene-C5O68_01240;Dbxref=NCBI_GP:RJP84351.1;Name=RJP84351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358283.1;locus_tag=C5O68_01240;product=hypothetical protein;protein_id=RJP84351.1;transl_table=11 PTQV01000005.1 Genbank gene 8557 8895 . - . ID=gene-C5O68_01245;Name=C5O68_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01245 PTQV01000005.1 Protein Homology CDS 8557 8895 . - 0 ID=cds-RJP84352.1;Parent=gene-C5O68_01245;Dbxref=NCBI_GP:RJP84352.1;Name=RJP84352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358282.1;locus_tag=C5O68_01245;product=hypothetical protein;protein_id=RJP84352.1;transl_table=11 PTQV01000005.1 Genbank gene 8907 9626 . - . ID=gene-C5O68_01250;Name=C5O68_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01250 PTQV01000005.1 Protein Homology CDS 8907 9626 . - 0 ID=cds-RJP84353.1;Parent=gene-C5O68_01250;Dbxref=NCBI_GP:RJP84353.1;Name=RJP84353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445946.1;locus_tag=C5O68_01250;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=RJP84353.1;transl_table=11 PTQV01000005.1 Genbank gene 9616 10134 . - . ID=gene-C5O68_01255;Name=C5O68_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01255 PTQV01000005.1 Protein Homology CDS 9616 10134 . - 0 ID=cds-RJP84354.1;Parent=gene-C5O68_01255;Dbxref=NCBI_GP:RJP84354.1;Name=RJP84354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445945.1;locus_tag=C5O68_01255;product=ribosome maturation factor RimM;protein_id=RJP84354.1;transl_table=11 PTQV01000005.1 Genbank gene 10165 10953 . - . ID=gene-C5O68_01260;Name=C5O68_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01260 PTQV01000005.1 Protein Homology CDS 10165 10953 . - 0 ID=cds-RJP84355.1;Parent=gene-C5O68_01260;Dbxref=NCBI_GP:RJP84355.1;Name=RJP84355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445944.1;locus_tag=C5O68_01260;product=alpha/beta hydrolase;protein_id=RJP84355.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 11096 11300 . - . ID=gene-C5O68_01265;Name=C5O68_01265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01265;pseudo=true PTQV01000005.1 Protein Homology CDS 11096 11300 . - 0 ID=cds-C5O68_01265;Parent=gene-C5O68_01265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779614.1;locus_tag=C5O68_01265;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 11530 11769 . - . ID=gene-C5O68_01270;Name=C5O68_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01270 PTQV01000005.1 Protein Homology CDS 11530 11769 . - 0 ID=cds-RJP84356.1;Parent=gene-C5O68_01270;Dbxref=NCBI_GP:RJP84356.1;Name=RJP84356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590445.1;locus_tag=C5O68_01270;product=KH domain-containing protein;protein_id=RJP84356.1;transl_table=11 PTQV01000005.1 Genbank gene 11789 12061 . - . ID=gene-C5O68_01275;Name=C5O68_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01275 PTQV01000005.1 Protein Homology CDS 11789 12061 . - 0 ID=cds-RJP84357.1;Parent=gene-C5O68_01275;Dbxref=NCBI_GP:RJP84357.1;Name=RJP84357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002884675.1;locus_tag=C5O68_01275;product=30S ribosomal protein S16;protein_id=RJP84357.1;transl_table=11 PTQV01000005.1 Genbank gene 12231 12440 . + . ID=gene-C5O68_01280;Name=C5O68_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01280 PTQV01000005.1 Protein Homology CDS 12231 12440 . + 0 ID=cds-RJP84358.1;Parent=gene-C5O68_01280;Dbxref=NCBI_GP:RJP84358.1;Name=RJP84358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953868.1;locus_tag=C5O68_01280;product=hypothetical protein;protein_id=RJP84358.1;transl_table=11 PTQV01000005.1 Genbank gene 12523 12741 . - . ID=gene-C5O68_01285;Name=C5O68_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01285 PTQV01000005.1 Protein Homology CDS 12523 12741 . - 0 ID=cds-RJP84359.1;Parent=gene-C5O68_01285;Dbxref=NCBI_GP:RJP84359.1;Name=RJP84359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_01285;product=hypothetical protein;protein_id=RJP84359.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 12782 12883 . - . ID=gene-C5O68_01290;Name=C5O68_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01290;pseudo=true PTQV01000005.1 Protein Homology CDS 12782 12883 . - 0 ID=cds-C5O68_01290;Parent=gene-C5O68_01290;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002893744.1;locus_tag=C5O68_01290;product=30S ribosomal protein S9;pseudo=true;transl_table=11 PTQV01000005.1 Genbank pseudogene 13056 13160 . - . ID=gene-C5O68_01295;Name=C5O68_01295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01295;pseudo=true PTQV01000005.1 Protein Homology CDS 13056 13160 . - 0 ID=cds-C5O68_01295;Parent=gene-C5O68_01295;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036206.1;locus_tag=C5O68_01295;product=site-specific integrase;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 13121 13615 . - . ID=gene-C5O68_01300;Name=C5O68_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01300 PTQV01000005.1 Protein Homology CDS 13121 13615 . - 0 ID=cds-RJP84360.1;Parent=gene-C5O68_01300;Dbxref=NCBI_GP:RJP84360.1;Name=RJP84360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284846.1;locus_tag=C5O68_01300;product=XRE family transcriptional regulator;protein_id=RJP84360.1;transl_table=11 PTQV01000005.1 Genbank gene 13659 13997 . - . ID=gene-C5O68_01305;Name=C5O68_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01305 PTQV01000005.1 Protein Homology CDS 13659 13997 . - 0 ID=cds-RJP84361.1;Parent=gene-C5O68_01305;Dbxref=NCBI_GP:RJP84361.1;Name=RJP84361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711077.1;locus_tag=C5O68_01305;product=transcriptional regulator;protein_id=RJP84361.1;transl_table=11 PTQV01000005.1 Genbank gene 14009 14635 . - . ID=gene-C5O68_01310;Name=C5O68_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01310 PTQV01000005.1 Protein Homology CDS 14009 14635 . - 0 ID=cds-RJP84362.1;Parent=gene-C5O68_01310;Dbxref=NCBI_GP:RJP84362.1;Name=RJP84362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035949.1;locus_tag=C5O68_01310;product=cadmium transporter;protein_id=RJP84362.1;transl_table=11 PTQV01000005.1 Genbank gene 14652 14825 . + . ID=gene-C5O68_01315;Name=C5O68_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01315 PTQV01000005.1 Protein Homology CDS 14652 14825 . + 0 ID=cds-RJP84363.1;Parent=gene-C5O68_01315;Dbxref=NCBI_GP:RJP84363.1;Name=RJP84363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892741.1;locus_tag=C5O68_01315;product=FanG protein;protein_id=RJP84363.1;transl_table=11 PTQV01000005.1 Genbank gene 15240 15818 . + . ID=gene-C5O68_01320;Name=C5O68_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01320 PTQV01000005.1 Protein Homology CDS 15240 15818 . + 0 ID=cds-RJP84364.1;Parent=gene-C5O68_01320;Dbxref=NCBI_GP:RJP84364.1;Name=RJP84364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445940.1;locus_tag=C5O68_01320;product=DUF3796 domain-containing protein;protein_id=RJP84364.1;transl_table=11 PTQV01000005.1 Genbank gene 15821 16045 . + . ID=gene-C5O68_01325;Name=C5O68_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01325 PTQV01000005.1 Protein Homology CDS 15821 16045 . + 0 ID=cds-RJP84365.1;Parent=gene-C5O68_01325;Dbxref=NCBI_GP:RJP84365.1;Name=RJP84365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001036207.1;locus_tag=C5O68_01325;product=transcriptional regulator;protein_id=RJP84365.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 16196 16407 . + . ID=gene-C5O68_01330;Name=C5O68_01330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01330;pseudo=true PTQV01000005.1 Protein Homology CDS 16196 16407 . + 0 ID=cds-C5O68_01330;Parent=gene-C5O68_01330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007554690.1;locus_tag=C5O68_01330;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000005.1 Genbank pseudogene 16373 16533 . + . ID=gene-C5O68_01335;Name=C5O68_01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01335;pseudo=true PTQV01000005.1 Protein Homology CDS 16373 16533 . + 0 ID=cds-C5O68_01335;Parent=gene-C5O68_01335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284845.1;locus_tag=C5O68_01335;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 16642 17445 . + . ID=gene-C5O68_01340;Name=C5O68_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01340 PTQV01000005.1 Protein Homology CDS 16642 17445 . + 0 ID=cds-RJP84366.1;Parent=gene-C5O68_01340;Dbxref=NCBI_GP:RJP84366.1;Name=RJP84366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358273.1;locus_tag=C5O68_01340;product=peptidylprolyl isomerase;protein_id=RJP84366.1;transl_table=11 PTQV01000005.1 Genbank gene 17501 19042 . - . ID=gene-C5O68_01345;Name=C5O68_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01345 PTQV01000005.1 Protein Homology CDS 17501 19042 . - 0 ID=cds-RJP84367.1;Parent=gene-C5O68_01345;Dbxref=NCBI_GP:RJP84367.1;Name=RJP84367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445936.1;locus_tag=C5O68_01345;product=ABC transporter ATP-binding protein;protein_id=RJP84367.1;transl_table=11 PTQV01000005.1 Genbank gene 19044 19526 . - . ID=gene-C5O68_01350;Name=C5O68_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01350 PTQV01000005.1 Protein Homology CDS 19044 19526 . - 0 ID=cds-RJP84368.1;Parent=gene-C5O68_01350;Dbxref=NCBI_GP:RJP84368.1;Name=RJP84368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976721.1;locus_tag=C5O68_01350;product=antibiotic resistance protein VanZ;protein_id=RJP84368.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 19526 20591 . - . ID=gene-C5O68_01355;Name=C5O68_01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01355;pseudo=true PTQV01000005.1 Protein Homology CDS 19526 20591 . - 0 ID=cds-C5O68_01355;Parent=gene-C5O68_01355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445934.1;locus_tag=C5O68_01355;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 20612 21142 . - . ID=gene-C5O68_01360;Name=C5O68_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01360 PTQV01000005.1 Protein Homology CDS 20612 21142 . - 0 ID=cds-RJP84369.1;Parent=gene-C5O68_01360;Dbxref=NCBI_GP:RJP84369.1;Name=RJP84369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445933.1;locus_tag=C5O68_01360;product=DUF1027 domain-containing protein;protein_id=RJP84369.1;transl_table=11 PTQV01000005.1 Genbank gene 21299 21904 . - . ID=gene-C5O68_01365;Name=C5O68_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01365 PTQV01000005.1 Protein Homology CDS 21299 21904 . - 0 ID=cds-RJP84370.1;Parent=gene-C5O68_01365;Dbxref=NCBI_GP:RJP84370.1;Name=RJP84370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358268.1;locus_tag=C5O68_01365;product=superoxide dismutase;protein_id=RJP84370.1;transl_table=11 PTQV01000005.1 Genbank gene 22233 23270 . - . ID=gene-C5O68_01370;Name=C5O68_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01370 PTQV01000005.1 Protein Homology CDS 22233 23270 . - 0 ID=cds-RJP84371.1;Parent=gene-C5O68_01370;Dbxref=NCBI_GP:RJP84371.1;Name=RJP84371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445931.1;locus_tag=C5O68_01370;product=DNA polymerase III subunit delta;protein_id=RJP84371.1;transl_table=11 PTQV01000005.1 Genbank gene 23303 24238 . - . ID=gene-C5O68_01375;Name=C5O68_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01375 PTQV01000005.1 Protein Homology CDS 23303 24238 . - 0 ID=cds-RJP84372.1;Parent=gene-C5O68_01375;Dbxref=NCBI_GP:RJP84372.1;Name=RJP84372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445930.1;locus_tag=C5O68_01375;product=dihydroorotate oxidase;protein_id=RJP84372.1;transl_table=11 PTQV01000005.1 Genbank gene 24571 25761 . - . ID=gene-C5O68_01380;Name=C5O68_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01380 PTQV01000005.1 Protein Homology CDS 24571 25761 . - 0 ID=cds-RJP84373.1;Parent=gene-C5O68_01380;Dbxref=NCBI_GP:RJP84373.1;Name=RJP84373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446502.1;locus_tag=C5O68_01380;product=methionine adenosyltransferase;protein_id=RJP84373.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 25947 26164 . + . ID=gene-C5O68_01385;Name=C5O68_01385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01385;pseudo=true PTQV01000005.1 Protein Homology CDS 25947 26164 . + 0 ID=cds-C5O68_01385;Parent=gene-C5O68_01385;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446503.1;locus_tag=C5O68_01385;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 26257 27600 . - . ID=gene-C5O68_01390;Name=C5O68_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01390 PTQV01000005.1 Protein Homology CDS 26257 27600 . - 0 ID=cds-RJP84374.1;Parent=gene-C5O68_01390;Dbxref=NCBI_GP:RJP84374.1;Name=RJP84374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446504.1;locus_tag=C5O68_01390;product=DEAD/DEAH box helicase;protein_id=RJP84374.1;transl_table=11 PTQV01000005.1 Genbank pseudogene 27837 28300 . - . ID=gene-C5O68_01395;Name=C5O68_01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01395;pseudo=true PTQV01000005.1 Protein Homology CDS 27837 28300 . - 0 ID=cds-C5O68_01395;Parent=gene-C5O68_01395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445928.1;locus_tag=C5O68_01395;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 PTQV01000005.1 Genbank pseudogene 28525 28596 . - . ID=gene-C5O68_01400;Name=C5O68_01400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01400;pseudo=true PTQV01000005.1 Protein Homology CDS 28525 28596 . - 0 ID=cds-C5O68_01400;Parent=gene-C5O68_01400;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_01400;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000005.1 Genbank gene 28602 29417 . - . ID=gene-C5O68_01405;Name=C5O68_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01405 PTQV01000005.1 Protein Homology CDS 28602 29417 . - 0 ID=cds-RJP84375.1;Parent=gene-C5O68_01405;Dbxref=NCBI_GP:RJP84375.1;Name=RJP84375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446505.1;locus_tag=C5O68_01405;product=hydrolase;protein_id=RJP84375.1;transl_table=11 PTQV01000005.1 Genbank gene 29469 31649 . - . ID=gene-C5O68_01410;Name=C5O68_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01410 PTQV01000005.1 Protein Homology CDS 29469 31649 . - 0 ID=cds-RJP84376.1;Parent=gene-C5O68_01410;Dbxref=NCBI_GP:RJP84376.1;Name=RJP84376.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446506.1;locus_tag=C5O68_01410;product=PTS glucose/maltose transporter subunit IIBCA;protein_id=RJP84376.1;transl_table=11 PTQV01000005.1 Genbank gene 32056 32982 . - . ID=gene-C5O68_01415;Name=C5O68_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01415 PTQV01000005.1 Protein Homology CDS 32056 32982 . - 0 ID=cds-RJP84377.1;Parent=gene-C5O68_01415;Dbxref=NCBI_GP:RJP84377.1;Name=RJP84377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446508.1;locus_tag=C5O68_01415;product=ABC transporter permease;protein_id=RJP84377.1;transl_table=11 PTQV01000005.1 Genbank gene 32975 33667 . - . ID=gene-C5O68_01420;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=C5O68_01420 PTQV01000005.1 Protein Homology CDS 32975 33667 . - 0 ID=cds-RJP84378.1;Parent=gene-C5O68_01420;Dbxref=NCBI_GP:RJP84378.1;Name=RJP84378.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446509.1;locus_tag=C5O68_01420;product=cell division ATP-binding protein FtsE;protein_id=RJP84378.1;transl_table=11 PTQV01000005.1 Genbank gene 33685 34780 . - . ID=gene-C5O68_01425;Name=C5O68_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01425 PTQV01000005.1 Protein Homology CDS 34709 34780 . - 0 ID=cds-RJP84379.1;Parent=gene-C5O68_01425;Dbxref=NCBI_GP:RJP84379.1;Name=RJP84379.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=C5O68_01425;product=peptide chain release factor 2;protein_id=RJP84379.1;transl_table=11 PTQV01000005.1 Protein Homology CDS 33685 34707 . - 0 ID=cds-RJP84379.1;Parent=gene-C5O68_01425;Dbxref=NCBI_GP:RJP84379.1;Name=RJP84379.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028312.1;locus_tag=C5O68_01425;product=peptide chain release factor 2;protein_id=RJP84379.1;transl_table=11 PTQV01000005.1 Genbank gene 34894 35550 . - . ID=gene-C5O68_01430;Name=C5O68_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01430 PTQV01000005.1 Protein Homology CDS 34894 35550 . - 0 ID=cds-RJP84380.1;Parent=gene-C5O68_01430;Dbxref=NCBI_GP:RJP84380.1;Name=RJP84380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358258.1;locus_tag=C5O68_01430;product=CBS domain-containing protein;protein_id=RJP84380.1;transl_table=11 PTQV01000005.1 Genbank gene 35909 36619 . - . ID=gene-C5O68_01435;Name=C5O68_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01435 PTQV01000005.1 Protein Homology CDS 35909 36619 . - 0 ID=cds-RJP84381.1;Parent=gene-C5O68_01435;Dbxref=NCBI_GP:RJP84381.1;Name=RJP84381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000062217.1;locus_tag=C5O68_01435;product=ABC transporter ATP-binding protein;protein_id=RJP84381.1;transl_table=11 PTQV01000005.1 Genbank gene 36619 37383 . - . ID=gene-C5O68_01440;Name=C5O68_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01440 PTQV01000005.1 Protein Homology CDS 36619 37383 . - 0 ID=cds-RJP84382.1;Parent=gene-C5O68_01440;Dbxref=NCBI_GP:RJP84382.1;Name=RJP84382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913097.1;locus_tag=C5O68_01440;product=ABC transporter ATP-binding protein;protein_id=RJP84382.1;transl_table=11 PTQV01000005.1 Genbank gene 37383 38339 . - . ID=gene-C5O68_01445;Name=C5O68_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01445 PTQV01000005.1 Protein Homology CDS 37383 38339 . - 0 ID=cds-RJP84383.1;Parent=gene-C5O68_01445;Dbxref=NCBI_GP:RJP84383.1;Name=RJP84383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358255.1;locus_tag=C5O68_01445;product=branched-chain amino acid ABC transporter permease;protein_id=RJP84383.1;transl_table=11 PTQV01000005.1 Genbank gene 38343 39212 . - . ID=gene-C5O68_01450;Name=C5O68_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01450 PTQV01000005.1 Protein Homology CDS 38343 39212 . - 0 ID=cds-RJP84384.1;Parent=gene-C5O68_01450;Dbxref=NCBI_GP:RJP84384.1;Name=RJP84384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446516.1;locus_tag=C5O68_01450;product=branched-chain amino acid ABC transporter permease;protein_id=RJP84384.1;transl_table=11 PTQV01000005.1 Genbank gene 39329 40489 . - . ID=gene-C5O68_01455;Name=C5O68_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01455 PTQV01000005.1 Protein Homology CDS 39329 40489 . - 0 ID=cds-RJP84385.1;Parent=gene-C5O68_01455;Dbxref=NCBI_GP:RJP84385.1;Name=RJP84385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358253.1;locus_tag=C5O68_01455;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=RJP84385.1;transl_table=11 PTQV01000005.1 Genbank gene 40592 40840 . - . ID=gene-C5O68_01460;Name=C5O68_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01460 PTQV01000005.1 Protein Homology CDS 40592 40840 . - 0 ID=cds-RJP84386.1;Parent=gene-C5O68_01460;Dbxref=NCBI_GP:RJP84386.1;Name=RJP84386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358251.1;locus_tag=C5O68_01460;product=hypothetical protein;protein_id=RJP84386.1;transl_table=11 PTQV01000005.1 Genbank gene 40824 40922 . + . ID=gene-C5O68_01465;Name=C5O68_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01465 PTQV01000005.1 Protein Homology CDS 40824 40922 . + 0 ID=cds-RJP84393.1;Parent=gene-C5O68_01465;Dbxref=NCBI_GP:RJP84393.1;Name=RJP84393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809256.1;locus_tag=C5O68_01465;product=Clp protease;protein_id=RJP84393.1;transl_table=11 PTQV01000005.1 Genbank gene 40919 41509 . - . ID=gene-C5O68_01470;Name=C5O68_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01470 PTQV01000005.1 Protein Homology CDS 40919 41509 . - 0 ID=cds-RJP84387.1;Parent=gene-C5O68_01470;Dbxref=NCBI_GP:RJP84387.1;Name=RJP84387.1;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446519.1;locus_tag=C5O68_01470;product=ATP-dependent Clp protease proteolytic subunit;protein_id=RJP84387.1;transl_table=11 PTQV01000005.1 Genbank gene 41683 42312 . - . ID=gene-C5O68_01475;Name=C5O68_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01475 PTQV01000005.1 Protein Homology CDS 41683 42312 . - 0 ID=cds-RJP84394.1;Parent=gene-C5O68_01475;Dbxref=NCBI_GP:RJP84394.1;Name=RJP84394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446520.1;locus_tag=C5O68_01475;product=uracil phosphoribosyltransferase;protein_id=RJP84394.1;transl_table=11 PTQV01000005.1 Genbank gene 42401 42868 . - . ID=gene-C5O68_01480;Name=C5O68_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01480 PTQV01000005.1 Protein Homology CDS 42401 42868 . - 0 ID=cds-RJP84388.1;Parent=gene-C5O68_01480;Dbxref=NCBI_GP:RJP84388.1;Name=RJP84388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358248.1;locus_tag=C5O68_01480;product=deoxycytidylate deaminase;protein_id=RJP84388.1;transl_table=11 PTQV01000005.1 Genbank gene 42887 43444 . - . ID=gene-C5O68_01485;Name=C5O68_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01485 PTQV01000005.1 Protein Homology CDS 42887 43444 . - 0 ID=cds-RJP84389.1;Parent=gene-C5O68_01485;Dbxref=NCBI_GP:RJP84389.1;Name=RJP84389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358247.1;locus_tag=C5O68_01485;product=TetR/AcrR family transcriptional regulator;protein_id=RJP84389.1;transl_table=11 PTQV01000005.1 Genbank gene 43569 44414 . + . ID=gene-C5O68_01490;Name=C5O68_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01490 PTQV01000005.1 Protein Homology CDS 43569 44414 . + 0 ID=cds-RJP84390.1;Parent=gene-C5O68_01490;Dbxref=NCBI_GP:RJP84390.1;Name=RJP84390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358246.1;locus_tag=C5O68_01490;product=DegV domain-containing protein;protein_id=RJP84390.1;transl_table=11 PTQV01000005.1 Genbank gene 44473 45645 . + . ID=gene-C5O68_01495;Name=C5O68_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01495 PTQV01000005.1 Protein Homology CDS 44473 45645 . + 0 ID=cds-RJP84395.1;Parent=gene-C5O68_01495;Dbxref=NCBI_GP:RJP84395.1;Name=RJP84395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446525.1;locus_tag=C5O68_01495;product=aminoacetone oxidase family FAD-binding enzyme;protein_id=RJP84395.1;transl_table=11 PTQV01000005.1 Genbank gene 45698 45907 . + . ID=gene-C5O68_01500;Name=C5O68_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01500 PTQV01000005.1 Protein Homology CDS 45698 45907 . + 0 ID=cds-RJP84391.1;Parent=gene-C5O68_01500;Dbxref=NCBI_GP:RJP84391.1;Name=RJP84391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006147280.1;locus_tag=C5O68_01500;product=DUF1697 domain-containing protein;protein_id=RJP84391.1;transl_table=11 PTQV01000005.1 Genbank gene 45904 46176 . - . ID=gene-C5O68_01505;Name=C5O68_01505;end_range=46176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01505;partial=true PTQV01000005.1 Protein Homology CDS 45904 46176 . - 0 ID=cds-RJP84392.1;Parent=gene-C5O68_01505;Dbxref=NCBI_GP:RJP84392.1;Name=RJP84392.1;end_range=46176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_01505;partial=true;product=IS5/IS1182 family transposase;protein_id=RJP84392.1;transl_table=11 ##sequence-region PTQV01000060.1 1 2927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000060.1 Genbank region 1 2927 . + . ID=PTQV01000060.1:1..2927;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000060.1 Genbank gene 183 1946 . + . ID=gene-C5O68_09290;Name=C5O68_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09290 PTQV01000060.1 Protein Homology CDS 183 1946 . + 0 ID=cds-RJP80024.1;Parent=gene-C5O68_09290;Dbxref=NCBI_GP:RJP80024.1;Name=RJP80024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359515.1;locus_tag=C5O68_09290;product=aspartate--tRNA ligase;protein_id=RJP80024.1;transl_table=11 PTQV01000060.1 Genbank gene 1924 2865 . + . ID=gene-C5O68_09295;Name=C5O68_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09295 PTQV01000060.1 Protein Homology CDS 1924 2865 . + 0 ID=cds-RJP80025.1;Parent=gene-C5O68_09295;Dbxref=NCBI_GP:RJP80025.1;Name=RJP80025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359514.1;locus_tag=C5O68_09295;product=YitT family protein;protein_id=RJP80025.1;transl_table=11 ##sequence-region PTQV01000061.1 1 234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000061.1 Genbank region 1 234 . + . ID=PTQV01000061.1:1..234;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000061.1 Genbank gene 1 234 . + . ID=gene-C5O68_09300;Name=C5O68_09300;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09300;partial=true;start_range=.,1 PTQV01000061.1 Protein Homology CDS 1 234 . + 2 ID=cds-RJP79997.1;Parent=gene-C5O68_09300;Dbxref=NCBI_GP:RJP79997.1;Name=RJP79997.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07564.9;locus_tag=C5O68_09300;partial=true;product=hypothetical protein;protein_id=RJP79997.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000062.1 1 26484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000062.1 Genbank region 1 26484 . + . ID=PTQV01000062.1:1..26484;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000062.1 Genbank gene 1 1750 . - . ID=gene-C5O68_09305;Name=C5O68_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09305;partial=true;start_range=.,1 PTQV01000062.1 GeneMarkS+ CDS 1 1750 . - 0 ID=cds-RJP79897.1;Parent=gene-C5O68_09305;Dbxref=NCBI_GP:RJP79897.1;Name=RJP79897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_09305;partial=true;product=hypothetical protein;protein_id=RJP79897.1;start_range=.,1;transl_table=11 PTQV01000062.1 Genbank gene 2035 2304 . - . ID=gene-C5O68_09310;Name=C5O68_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09310 PTQV01000062.1 Protein Homology CDS 2035 2304 . - 0 ID=cds-RJP79898.1;Parent=gene-C5O68_09310;Dbxref=NCBI_GP:RJP79898.1;Name=RJP79898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762786.1;locus_tag=C5O68_09310;product=hypothetical protein;protein_id=RJP79898.1;transl_table=11 PTQV01000062.1 Genbank pseudogene 2555 3614 . - . ID=gene-C5O68_09315;Name=C5O68_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09315;pseudo=true PTQV01000062.1 Protein Homology CDS 2555 3614 . - 0 ID=cds-C5O68_09315;Parent=gene-C5O68_09315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357707.1;locus_tag=C5O68_09315;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000062.1 Genbank gene 4417 4629 . - . ID=gene-C5O68_09320;Name=C5O68_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09320 PTQV01000062.1 Protein Homology CDS 4417 4629 . - 0 ID=cds-RJP79899.1;Parent=gene-C5O68_09320;Dbxref=NCBI_GP:RJP79899.1;Name=RJP79899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357706.1;locus_tag=C5O68_09320;product=hypothetical protein;protein_id=RJP79899.1;transl_table=11 PTQV01000062.1 Genbank gene 4637 5008 . - . ID=gene-C5O68_09325;Name=C5O68_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09325 PTQV01000062.1 Protein Homology CDS 4637 5008 . - 0 ID=cds-RJP79900.1;Parent=gene-C5O68_09325;Dbxref=NCBI_GP:RJP79900.1;Name=RJP79900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357705.1;locus_tag=C5O68_09325;product=hypothetical protein;protein_id=RJP79900.1;transl_table=11 PTQV01000062.1 Genbank gene 5153 5911 . - . ID=gene-C5O68_09330;Name=C5O68_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09330 PTQV01000062.1 Protein Homology CDS 5153 5911 . - 0 ID=cds-RJP79901.1;Parent=gene-C5O68_09330;Dbxref=NCBI_GP:RJP79901.1;Name=RJP79901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357713.1;locus_tag=C5O68_09330;product=hypothetical protein;protein_id=RJP79901.1;transl_table=11 PTQV01000062.1 Genbank gene 6008 6196 . - . ID=gene-C5O68_09335;Name=C5O68_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09335 PTQV01000062.1 Protein Homology CDS 6008 6196 . - 0 ID=cds-RJP79902.1;Parent=gene-C5O68_09335;Dbxref=NCBI_GP:RJP79902.1;Name=RJP79902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000525455.1;locus_tag=C5O68_09335;product=hypothetical protein;protein_id=RJP79902.1;transl_table=11 PTQV01000062.1 Genbank gene 6204 6578 . - . ID=gene-C5O68_09340;Name=C5O68_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09340 PTQV01000062.1 Protein Homology CDS 6204 6578 . - 0 ID=cds-RJP79903.1;Parent=gene-C5O68_09340;Dbxref=NCBI_GP:RJP79903.1;Name=RJP79903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357709.1;locus_tag=C5O68_09340;product=hypothetical protein;protein_id=RJP79903.1;transl_table=11 PTQV01000062.1 Genbank gene 6912 7217 . - . ID=gene-C5O68_09345;Name=C5O68_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09345 PTQV01000062.1 Protein Homology CDS 6912 7217 . - 0 ID=cds-RJP79904.1;Parent=gene-C5O68_09345;Dbxref=NCBI_GP:RJP79904.1;Name=RJP79904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420335.1;locus_tag=C5O68_09345;product=hypothetical protein;protein_id=RJP79904.1;transl_table=11 PTQV01000062.1 Genbank gene 7365 8717 . - . ID=gene-C5O68_09350;Name=C5O68_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09350 PTQV01000062.1 Protein Homology CDS 7365 8717 . - 0 ID=cds-RJP79905.1;Parent=gene-C5O68_09350;Dbxref=NCBI_GP:RJP79905.1;Name=RJP79905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357702.1;locus_tag=C5O68_09350;product=secretion protein HlyD;protein_id=RJP79905.1;transl_table=11 PTQV01000062.1 Genbank gene 8714 9181 . - . ID=gene-C5O68_09355;Name=C5O68_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09355 PTQV01000062.1 Protein Homology CDS 8714 9181 . - 0 ID=cds-RJP79906.1;Parent=gene-C5O68_09355;Dbxref=NCBI_GP:RJP79906.1;Name=RJP79906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357701.1;locus_tag=C5O68_09355;product=AraC family transcriptional regulator;protein_id=RJP79906.1;transl_table=11 PTQV01000062.1 Genbank gene 9174 11393 . - . ID=gene-C5O68_09360;Name=C5O68_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09360 PTQV01000062.1 Protein Homology CDS 9174 11393 . - 0 ID=cds-RJP79921.1;Parent=gene-C5O68_09360;Dbxref=NCBI_GP:RJP79921.1;Name=RJP79921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856353.1;locus_tag=C5O68_09360;product=ABC transporter permease;protein_id=RJP79921.1;transl_table=11 PTQV01000062.1 Genbank gene 11980 12300 . + . ID=gene-C5O68_09365;Name=C5O68_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09365 PTQV01000062.1 Protein Homology CDS 11980 12300 . + 0 ID=cds-RJP79907.1;Parent=gene-C5O68_09365;Dbxref=NCBI_GP:RJP79907.1;Name=RJP79907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357704.1;locus_tag=C5O68_09365;product=DNA-binding protein;protein_id=RJP79907.1;transl_table=11 PTQV01000062.1 Genbank gene 12492 12698 . - . ID=gene-C5O68_09370;Name=C5O68_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09370 PTQV01000062.1 Protein Homology CDS 12492 12698 . - 0 ID=cds-RJP79922.1;Parent=gene-C5O68_09370;Dbxref=NCBI_GP:RJP79922.1;Name=RJP79922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632394.1;locus_tag=C5O68_09370;product=hypothetical protein;protein_id=RJP79922.1;transl_table=11 PTQV01000062.1 Genbank gene 12700 13080 . - . ID=gene-C5O68_09375;Name=C5O68_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09375 PTQV01000062.1 Protein Homology CDS 12700 13080 . - 0 ID=cds-RJP79908.1;Parent=gene-C5O68_09375;Dbxref=NCBI_GP:RJP79908.1;Name=RJP79908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357703.1;locus_tag=C5O68_09375;product=argininosuccinate lyase;protein_id=RJP79908.1;transl_table=11 PTQV01000062.1 Genbank gene 13717 14580 . + . ID=gene-C5O68_09380;Name=C5O68_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09380 PTQV01000062.1 Protein Homology CDS 13717 14580 . + 0 ID=cds-RJP79909.1;Parent=gene-C5O68_09380;Dbxref=NCBI_GP:RJP79909.1;Name=RJP79909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268160.1;locus_tag=C5O68_09380;product=DNA-binding protein;protein_id=RJP79909.1;transl_table=11 PTQV01000062.1 Genbank gene 14632 15219 . - . ID=gene-C5O68_09385;Name=C5O68_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09385 PTQV01000062.1 Protein Homology CDS 14632 15219 . - 0 ID=cds-RJP79910.1;Parent=gene-C5O68_09385;Dbxref=NCBI_GP:RJP79910.1;Name=RJP79910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357690.1;locus_tag=C5O68_09385;product=LysM domain-containing protein;protein_id=RJP79910.1;transl_table=11 PTQV01000062.1 Genbank gene 15461 16132 . + . ID=gene-C5O68_09390;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=C5O68_09390 PTQV01000062.1 Protein Homology CDS 15461 16132 . + 0 ID=cds-RJP79911.1;Parent=gene-C5O68_09390;Dbxref=NCBI_GP:RJP79911.1;Name=RJP79911.1;gbkey=CDS;gene=sdaAB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357689.1;locus_tag=C5O68_09390;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit beta;protein_id=RJP79911.1;transl_table=11 PTQV01000062.1 Genbank gene 16141 17013 . + . ID=gene-C5O68_09395;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=C5O68_09395 PTQV01000062.1 Protein Homology CDS 16141 17013 . + 0 ID=cds-RJP79912.1;Parent=gene-C5O68_09395;Dbxref=NCBI_GP:RJP79912.1;Name=RJP79912.1;gbkey=CDS;gene=sdaAA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357688.1;locus_tag=C5O68_09395;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=RJP79912.1;transl_table=11 PTQV01000062.1 Genbank gene 17035 17667 . + . ID=gene-C5O68_09400;Name=C5O68_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09400 PTQV01000062.1 Protein Homology CDS 17035 17667 . + 0 ID=cds-RJP79913.1;Parent=gene-C5O68_09400;Dbxref=NCBI_GP:RJP79913.1;Name=RJP79913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357687.1;locus_tag=C5O68_09400;product=phosphoglycolate phosphatase;protein_id=RJP79913.1;transl_table=11 PTQV01000062.1 Genbank pseudogene 17870 17951 . + . ID=gene-C5O68_09405;Name=C5O68_09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09405;pseudo=true PTQV01000062.1 Protein Homology CDS 17870 17951 . + 0 ID=cds-C5O68_09405;Parent=gene-C5O68_09405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238277.1;locus_tag=C5O68_09405;product=lysyl-tRNA synthetase;pseudo=true;transl_table=11 PTQV01000062.1 Genbank gene 18014 19864 . - . ID=gene-C5O68_09410;Name=C5O68_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09410 PTQV01000062.1 Protein Homology CDS 18014 19864 . - 0 ID=cds-RJP79914.1;Parent=gene-C5O68_09410;Dbxref=NCBI_GP:RJP79914.1;Name=RJP79914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357686.1;locus_tag=C5O68_09410;product=polysaccharide biosynthesis protein;protein_id=RJP79914.1;transl_table=11 PTQV01000062.1 Genbank gene 19932 21062 . - . ID=gene-C5O68_09415;Name=C5O68_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09415 PTQV01000062.1 Protein Homology CDS 19932 21062 . - 0 ID=cds-RJP79915.1;Parent=gene-C5O68_09415;Dbxref=NCBI_GP:RJP79915.1;Name=RJP79915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000096213.1;locus_tag=C5O68_09415;product=glycosyltransferase;protein_id=RJP79915.1;transl_table=11 PTQV01000062.1 Genbank gene 21120 22286 . + . ID=gene-C5O68_09420;Name=C5O68_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09420 PTQV01000062.1 Protein Homology CDS 21120 22286 . + 0 ID=cds-RJP79916.1;Parent=gene-C5O68_09420;Dbxref=NCBI_GP:RJP79916.1;Name=RJP79916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357684.1;locus_tag=C5O68_09420;product=MFS transporter;protein_id=RJP79916.1;transl_table=11 PTQV01000062.1 Genbank gene 22425 22751 . + . ID=gene-C5O68_09425;Name=C5O68_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09425 PTQV01000062.1 Protein Homology CDS 22425 22751 . + 0 ID=cds-RJP79917.1;Parent=gene-C5O68_09425;Dbxref=NCBI_GP:RJP79917.1;Name=RJP79917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357683.1;locus_tag=C5O68_09425;product=PadR family transcriptional regulator;protein_id=RJP79917.1;transl_table=11 PTQV01000062.1 Genbank gene 22738 23331 . + . ID=gene-C5O68_09430;Name=C5O68_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09430 PTQV01000062.1 Protein Homology CDS 22738 23331 . + 0 ID=cds-RJP79918.1;Parent=gene-C5O68_09430;Dbxref=NCBI_GP:RJP79918.1;Name=RJP79918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357682.1;locus_tag=C5O68_09430;product=DUF1700 domain-containing protein;protein_id=RJP79918.1;transl_table=11 PTQV01000062.1 Genbank gene 23273 24235 . + . ID=gene-C5O68_09435;Name=C5O68_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09435 PTQV01000062.1 Protein Homology CDS 23273 24235 . + 0 ID=cds-RJP79919.1;Parent=gene-C5O68_09435;Dbxref=NCBI_GP:RJP79919.1;Name=RJP79919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357681.1;locus_tag=C5O68_09435;product=hypothetical protein;protein_id=RJP79919.1;transl_table=11 PTQV01000062.1 Genbank gene 24297 25361 . + . ID=gene-C5O68_09440;Name=C5O68_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09440 PTQV01000062.1 Protein Homology CDS 24297 25361 . + 0 ID=cds-RJP79920.1;Parent=gene-C5O68_09440;Dbxref=NCBI_GP:RJP79920.1;Name=RJP79920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357680.1;locus_tag=C5O68_09440;product=hypothetical protein;protein_id=RJP79920.1;transl_table=11 PTQV01000062.1 Genbank pseudogene 25433 26293 . - . ID=gene-C5O68_09445;Name=C5O68_09445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09445;pseudo=true PTQV01000062.1 Protein Homology CDS 25433 26293 . - 0 ID=cds-C5O68_09445;Parent=gene-C5O68_09445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447085.1;locus_tag=C5O68_09445;product=DUF4299 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000063.1 1 22167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000063.1 Genbank region 1 22167 . + . ID=PTQV01000063.1:1..22167;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000063.1 Genbank pseudogene 1 374 . - . ID=gene-C5O68_09450;Name=C5O68_09450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09450;pseudo=true PTQV01000063.1 Protein Homology CDS 1 374 . - 0 ID=cds-C5O68_09450;Parent=gene-C5O68_09450;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_09450;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000063.1 Genbank gene 432 2672 . - . ID=gene-C5O68_09455;Name=C5O68_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09455 PTQV01000063.1 Protein Homology CDS 432 2672 . - 0 ID=cds-RJP79820.1;Parent=gene-C5O68_09455;Dbxref=NCBI_GP:RJP79820.1;Name=RJP79820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446068.1;locus_tag=C5O68_09455;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=RJP79820.1;transl_table=11 PTQV01000063.1 Genbank gene 2656 3294 . - . ID=gene-C5O68_09460;Name=C5O68_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09460 PTQV01000063.1 Protein Homology CDS 2656 3294 . - 0 ID=cds-RJP79821.1;Parent=gene-C5O68_09460;Dbxref=NCBI_GP:RJP79821.1;Name=RJP79821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446067.1;locus_tag=C5O68_09460;product=competence protein CelA;protein_id=RJP79821.1;transl_table=11 PTQV01000063.1 Genbank gene 3361 3930 . - . ID=gene-C5O68_09465;Name=C5O68_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09465 PTQV01000063.1 Protein Homology CDS 3361 3930 . - 0 ID=cds-RJP79822.1;Parent=gene-C5O68_09465;Dbxref=NCBI_GP:RJP79822.1;Name=RJP79822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358449.1;locus_tag=C5O68_09465;product=N-acetyltransferase;protein_id=RJP79822.1;transl_table=11 PTQV01000063.1 Genbank gene 4101 5213 . + . ID=gene-C5O68_09470;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=C5O68_09470 PTQV01000063.1 Protein Homology CDS 4101 5213 . + 0 ID=cds-RJP79823.1;Parent=gene-C5O68_09470;Dbxref=NCBI_GP:RJP79823.1;Name=RJP79823.1;gbkey=CDS;gene=ald;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001035553.1;locus_tag=C5O68_09470;product=alanine dehydrogenase;protein_id=RJP79823.1;transl_table=11 PTQV01000063.1 Genbank pseudogene 5613 5839 . - . ID=gene-C5O68_09475;Name=C5O68_09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09475;pseudo=true PTQV01000063.1 Protein Homology CDS 5613 5839 . - 0 ID=cds-C5O68_09475;Parent=gene-C5O68_09475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168546.1;locus_tag=C5O68_09475;product=transcriptional regulator;pseudo=true;transl_table=11 PTQV01000063.1 Genbank gene 5842 6342 . - . ID=gene-C5O68_09480;Name=C5O68_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09480 PTQV01000063.1 Protein Homology CDS 5842 6342 . - 0 ID=cds-RJP79824.1;Parent=gene-C5O68_09480;Dbxref=NCBI_GP:RJP79824.1;Name=RJP79824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358444.1;locus_tag=C5O68_09480;product=N-acetyltransferase;protein_id=RJP79824.1;transl_table=11 PTQV01000063.1 Genbank gene 6378 6557 . + . ID=gene-C5O68_09485;Name=C5O68_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09485 PTQV01000063.1 Protein Homology CDS 6378 6557 . + 0 ID=cds-RJP79825.1;Parent=gene-C5O68_09485;Dbxref=NCBI_GP:RJP79825.1;Name=RJP79825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813350.1;locus_tag=C5O68_09485;product=hypothetical protein;protein_id=RJP79825.1;transl_table=11 PTQV01000063.1 Genbank gene 6535 7503 . - . ID=gene-C5O68_09490;Name=C5O68_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09490 PTQV01000063.1 Protein Homology CDS 6535 7503 . - 0 ID=cds-RJP79826.1;Parent=gene-C5O68_09490;Dbxref=NCBI_GP:RJP79826.1;Name=RJP79826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358443.1;locus_tag=C5O68_09490;product=phosphate starvation-inducible protein PhoH;protein_id=RJP79826.1;transl_table=11 PTQV01000063.1 Genbank gene 7588 7803 . - . ID=gene-C5O68_09495;Name=C5O68_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09495 PTQV01000063.1 Protein Homology CDS 7588 7803 . - 0 ID=cds-RJP79827.1;Parent=gene-C5O68_09495;Dbxref=NCBI_GP:RJP79827.1;Name=RJP79827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446064.1;locus_tag=C5O68_09495;product=YozE family protein;protein_id=RJP79827.1;transl_table=11 PTQV01000063.1 Genbank gene 7812 8666 . - . ID=gene-C5O68_09500;Name=C5O68_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09500 PTQV01000063.1 Protein Homology CDS 7812 8666 . - 0 ID=cds-RJP79828.1;Parent=gene-C5O68_09500;Dbxref=NCBI_GP:RJP79828.1;Name=RJP79828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446063.1;locus_tag=C5O68_09500;product=RNA-binding protein;protein_id=RJP79828.1;transl_table=11 PTQV01000063.1 Genbank gene 8726 9283 . - . ID=gene-C5O68_09505;Name=C5O68_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09505 PTQV01000063.1 Protein Homology CDS 8726 9283 . - 0 ID=cds-RJP79829.1;Parent=gene-C5O68_09505;Dbxref=NCBI_GP:RJP79829.1;Name=RJP79829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006148672.1;locus_tag=C5O68_09505;product=ribosome-recycling factor;protein_id=RJP79829.1;transl_table=11 PTQV01000063.1 Genbank gene 9292 10029 . - . ID=gene-C5O68_09510;Name=C5O68_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09510 PTQV01000063.1 Protein Homology CDS 9292 10029 . - 0 ID=cds-RJP79830.1;Parent=gene-C5O68_09510;Dbxref=NCBI_GP:RJP79830.1;Name=RJP79830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446061.1;locus_tag=C5O68_09510;product=UMP kinase;protein_id=RJP79830.1;transl_table=11 PTQV01000063.1 Genbank gene 10113 11447 . - . ID=gene-C5O68_09515;Name=C5O68_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09515 PTQV01000063.1 Protein Homology CDS 10113 11447 . - 0 ID=cds-RJP79831.1;Parent=gene-C5O68_09515;Dbxref=NCBI_GP:RJP79831.1;Name=RJP79831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358438.1;locus_tag=C5O68_09515;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=RJP79831.1;transl_table=11 PTQV01000063.1 Genbank gene 11830 12708 . - . ID=gene-C5O68_09520;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=C5O68_09520 PTQV01000063.1 Protein Homology CDS 11830 12708 . - 0 ID=cds-RJP79832.1;Parent=gene-C5O68_09520;Dbxref=NCBI_GP:RJP79832.1;Name=RJP79832.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166890.1;locus_tag=C5O68_09520;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=RJP79832.1;transl_table=11 PTQV01000063.1 Genbank gene 12711 13028 . - . ID=gene-C5O68_09525;Name=C5O68_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09525 PTQV01000063.1 Protein Homology CDS 12711 13028 . - 0 ID=cds-RJP79833.1;Parent=gene-C5O68_09525;Dbxref=NCBI_GP:RJP79833.1;Name=RJP79833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446052.1;locus_tag=C5O68_09525;product=DNA replication initiation control protein YabA;protein_id=RJP79833.1;transl_table=11 PTQV01000063.1 Genbank gene 13068 13958 . - . ID=gene-C5O68_09530;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=C5O68_09530 PTQV01000063.1 Protein Homology CDS 13068 13958 . - 0 ID=cds-RJP79834.1;Parent=gene-C5O68_09530;Dbxref=NCBI_GP:RJP79834.1;Name=RJP79834.1;gbkey=CDS;gene=holB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358430.1;locus_tag=C5O68_09530;product=DNA polymerase III subunit delta';protein_id=RJP79834.1;transl_table=11 PTQV01000063.1 Genbank gene 13955 14593 . - . ID=gene-C5O68_09535;Name=C5O68_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09535 PTQV01000063.1 Protein Homology CDS 13955 14593 . - 0 ID=cds-RJP79835.1;Parent=gene-C5O68_09535;Dbxref=NCBI_GP:RJP79835.1;Name=RJP79835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446050.1;locus_tag=C5O68_09535;product=dTMP kinase;protein_id=RJP79835.1;transl_table=11 PTQV01000063.1 Genbank gene 14707 15504 . - . ID=gene-C5O68_09540;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=C5O68_09540 PTQV01000063.1 Protein Homology CDS 14707 15504 . - 0 ID=cds-RJP79836.1;Parent=gene-C5O68_09540;Dbxref=NCBI_GP:RJP79836.1;Name=RJP79836.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446049.1;locus_tag=C5O68_09540;product=pyrroline-5-carboxylate reductase;protein_id=RJP79836.1;transl_table=11 PTQV01000063.1 Genbank pseudogene 15508 16770 . - . ID=gene-C5O68_09545;Name=C5O68_09545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09545;pseudo=true PTQV01000063.1 Protein Homology CDS 15508 16770 . - 0 ID=cds-C5O68_09545;Parent=gene-C5O68_09545;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446048.1;locus_tag=C5O68_09545;product=glutamate-5-semialdehyde dehydrogenase;pseudo=true;transl_table=11 PTQV01000063.1 Genbank gene 16780 17910 . - . ID=gene-C5O68_09550;Name=C5O68_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09550 PTQV01000063.1 Protein Homology CDS 16780 17910 . - 0 ID=cds-RJP79837.1;Parent=gene-C5O68_09550;Dbxref=NCBI_GP:RJP79837.1;Name=RJP79837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446047.1;locus_tag=C5O68_09550;product=glutamate 5-kinase;protein_id=RJP79837.1;transl_table=11 PTQV01000063.1 Genbank gene 17990 19873 . - . ID=gene-C5O68_09555;Name=C5O68_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09555 PTQV01000063.1 Protein Homology CDS 17990 19873 . - 0 ID=cds-RJP79838.1;Parent=gene-C5O68_09555;Dbxref=NCBI_GP:RJP79838.1;Name=RJP79838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358425.1;locus_tag=C5O68_09555;product=choline-binding protein;protein_id=RJP79838.1;transl_table=11 PTQV01000063.1 Genbank gene 19873 20763 . - . ID=gene-C5O68_09560;Name=C5O68_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09560 PTQV01000063.1 Protein Homology CDS 19873 20763 . - 0 ID=cds-RJP79839.1;Parent=gene-C5O68_09560;Dbxref=NCBI_GP:RJP79839.1;Name=RJP79839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446044.1;locus_tag=C5O68_09560;product=RluA family pseudouridine synthase;protein_id=RJP79839.1;transl_table=11 PTQV01000063.1 Genbank gene 20753 21214 . - . ID=gene-C5O68_09565;Name=C5O68_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09565 PTQV01000063.1 Protein Homology CDS 20753 21214 . - 0 ID=cds-RJP79840.1;Parent=gene-C5O68_09565;Dbxref=NCBI_GP:RJP79840.1;Name=RJP79840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446043.1;locus_tag=C5O68_09565;product=signal peptidase II;protein_id=RJP79840.1;transl_table=11 PTQV01000063.1 Genbank gene 21211 22119 . - . ID=gene-C5O68_09570;Name=C5O68_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09570 PTQV01000063.1 Protein Homology CDS 21211 22119 . - 0 ID=cds-RJP79841.1;Parent=gene-C5O68_09570;Dbxref=NCBI_GP:RJP79841.1;Name=RJP79841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446042.1;locus_tag=C5O68_09570;product=LysR family transcriptional regulator;protein_id=RJP79841.1;transl_table=11 ##sequence-region PTQV01000064.1 1 7717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000064.1 Genbank region 1 7717 . + . ID=PTQV01000064.1:1..7717;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000064.1 Genbank gene 278 7402 . - . ID=gene-C5O68_09575;Name=C5O68_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09575 PTQV01000064.1 Protein Homology CDS 278 7402 . - 0 ID=cds-RJP79767.1;Parent=gene-C5O68_09575;Dbxref=NCBI_GP:RJP79767.1;Name=RJP79767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001042478.1;locus_tag=C5O68_09575;product=beta-galactosidase;protein_id=RJP79767.1;transl_table=11 ##sequence-region PTQV01000065.1 1 14640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000065.1 Genbank region 1 14640 . + . ID=PTQV01000065.1:1..14640;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000065.1 Genbank gene 76 195 . - . ID=gene-C5O68_09580;Name=C5O68_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09580 PTQV01000065.1 Protein Homology CDS 76 195 . - 0 ID=cds-RJP79739.1;Parent=gene-C5O68_09580;Dbxref=NCBI_GP:RJP79739.1;Name=RJP79739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808892.1;locus_tag=C5O68_09580;product=UDP pyrophosphate phosphatase;protein_id=RJP79739.1;transl_table=11 PTQV01000065.1 Genbank gene 188 1033 . - . ID=gene-C5O68_09585;Name=C5O68_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09585 PTQV01000065.1 Protein Homology CDS 188 1033 . - 0 ID=cds-RJP79740.1;Parent=gene-C5O68_09585;Dbxref=NCBI_GP:RJP79740.1;Name=RJP79740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371981.1;locus_tag=C5O68_09585;product=undecaprenyl-diphosphate phosphatase;protein_id=RJP79740.1;transl_table=11 PTQV01000065.1 Genbank gene 1095 2984 . - . ID=gene-C5O68_09590;Name=C5O68_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09590 PTQV01000065.1 Protein Homology CDS 1095 2984 . - 0 ID=cds-RJP79741.1;Parent=gene-C5O68_09590;Dbxref=NCBI_GP:RJP79741.1;Name=RJP79741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446918.1;locus_tag=C5O68_09590;product=DUF2207 domain-containing protein;protein_id=RJP79741.1;transl_table=11 PTQV01000065.1 Genbank gene 3122 4687 . + . ID=gene-C5O68_09595;Name=C5O68_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09595 PTQV01000065.1 Protein Homology CDS 3122 4687 . + 0 ID=cds-RJP79742.1;Parent=gene-C5O68_09595;Dbxref=NCBI_GP:RJP79742.1;Name=RJP79742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358003.2;locus_tag=C5O68_09595;product=glutamine ABC transporter substrate-binding protein;protein_id=RJP79742.1;transl_table=11 PTQV01000065.1 Genbank gene 4687 5427 . + . ID=gene-C5O68_09600;Name=C5O68_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09600 PTQV01000065.1 Protein Homology CDS 4687 5427 . + 0 ID=cds-RJP79743.1;Parent=gene-C5O68_09600;Dbxref=NCBI_GP:RJP79743.1;Name=RJP79743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358002.1;locus_tag=C5O68_09600;product=amino acid ABC transporter ATP-binding protein;protein_id=RJP79743.1;transl_table=11 PTQV01000065.1 Genbank gene 5534 5749 . - . ID=gene-C5O68_09605;Name=C5O68_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09605 PTQV01000065.1 Protein Homology CDS 5534 5749 . - 0 ID=cds-RJP79744.1;Parent=gene-C5O68_09605;Dbxref=NCBI_GP:RJP79744.1;Name=RJP79744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446921.1;locus_tag=C5O68_09605;product=hypothetical protein;protein_id=RJP79744.1;transl_table=11 PTQV01000065.1 Genbank gene 6580 7830 . - . ID=gene-C5O68_09610;Name=C5O68_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09610 PTQV01000065.1 Protein Homology CDS 6580 7830 . - 0 ID=cds-RJP79745.1;Parent=gene-C5O68_09610;Dbxref=NCBI_GP:RJP79745.1;Name=RJP79745.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B biosynthetic;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446922.1;locus_tag=C5O68_09610;product=threonine dehydratase;protein_id=RJP79745.1;transl_table=11 PTQV01000065.1 Genbank gene 7881 8237 . - . ID=gene-C5O68_09615;Name=C5O68_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09615 PTQV01000065.1 Protein Homology CDS 7881 8237 . - 0 ID=cds-RJP79746.1;Parent=gene-C5O68_09615;Dbxref=NCBI_GP:RJP79746.1;Name=RJP79746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357999.1;locus_tag=C5O68_09615;product=ketol-acid reductoisomerase;protein_id=RJP79746.1;transl_table=11 PTQV01000065.1 Genbank gene 8321 9343 . - . ID=gene-C5O68_09620;Name=C5O68_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09620 PTQV01000065.1 Protein Homology CDS 8321 9343 . - 0 ID=cds-RJP79747.1;Parent=gene-C5O68_09620;Dbxref=NCBI_GP:RJP79747.1;Name=RJP79747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003010246.1;locus_tag=C5O68_09620;product=ketol-acid reductoisomerase;protein_id=RJP79747.1;transl_table=11 PTQV01000065.1 Genbank gene 9409 9885 . - . ID=gene-C5O68_09625;Name=C5O68_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09625 PTQV01000065.1 Protein Homology CDS 9409 9885 . - 0 ID=cds-RJP79748.1;Parent=gene-C5O68_09625;Dbxref=NCBI_GP:RJP79748.1;Name=RJP79748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927678.1;locus_tag=C5O68_09625;product=acetolactate synthase small subunit;protein_id=RJP79748.1;transl_table=11 PTQV01000065.1 Genbank gene 9878 11578 . - . ID=gene-C5O68_09630;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=C5O68_09630 PTQV01000065.1 Protein Homology CDS 9878 11578 . - 0 ID=cds-RJP79749.1;Parent=gene-C5O68_09630;Dbxref=NCBI_GP:RJP79749.1;Name=RJP79749.1;gbkey=CDS;gene=ilvB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446925.1;locus_tag=C5O68_09630;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=RJP79749.1;transl_table=11 PTQV01000065.1 Genbank gene 11784 13451 . - . ID=gene-C5O68_09635;Name=C5O68_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09635 PTQV01000065.1 Protein Homology CDS 11784 13451 . - 0 ID=cds-RJP79750.1;Parent=gene-C5O68_09635;Dbxref=NCBI_GP:RJP79750.1;Name=RJP79750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446926.1;locus_tag=C5O68_09635;product=hypothetical protein;protein_id=RJP79750.1;transl_table=11 PTQV01000065.1 Genbank gene 13454 13819 . - . ID=gene-C5O68_09640;Name=C5O68_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09640 PTQV01000065.1 Protein Homology CDS 13454 13819 . - 0 ID=cds-RJP79751.1;Parent=gene-C5O68_09640;Dbxref=NCBI_GP:RJP79751.1;Name=RJP79751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371966.1;locus_tag=C5O68_09640;product=Asp23/Gls24 family envelope stress response protein;protein_id=RJP79751.1;transl_table=11 PTQV01000065.1 Genbank gene 13974 14162 . - . ID=gene-C5O68_09645;Name=C5O68_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09645 PTQV01000065.1 Protein Homology CDS 13974 14162 . - 0 ID=cds-RJP79752.1;Parent=gene-C5O68_09645;Dbxref=NCBI_GP:RJP79752.1;Name=RJP79752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=C5O68_09645;product=50S ribosomal protein L28;protein_id=RJP79752.1;transl_table=11 ##sequence-region PTQV01000066.1 1 663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000066.1 Genbank region 1 663 . + . ID=PTQV01000066.1:1..663;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000066.1 Genbank gene 50 523 . - . ID=gene-C5O68_09650;Name=C5O68_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09650 PTQV01000066.1 Protein Homology CDS 50 523 . - 0 ID=cds-RJP79724.1;Parent=gene-C5O68_09650;Dbxref=NCBI_GP:RJP79724.1;Name=RJP79724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=C5O68_09650;product=IS200/IS605 family transposase;protein_id=RJP79724.1;transl_table=11 ##sequence-region PTQV01000067.1 1 2002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000067.1 Genbank region 1 2002 . + . ID=PTQV01000067.1:1..2002;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000067.1 Genbank gene 1 112 . - . ID=gene-C5O68_09655;Name=C5O68_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09655;partial=true;start_range=.,1 PTQV01000067.1 Protein Homology CDS 1 112 . - 0 ID=cds-RJP79679.1;Parent=gene-C5O68_09655;Dbxref=NCBI_GP:RJP79679.1;Name=RJP79679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445397.1;locus_tag=C5O68_09655;partial=true;product=ABC transporter permease;protein_id=RJP79679.1;start_range=.,1;transl_table=11 PTQV01000067.1 Genbank gene 114 998 . - . ID=gene-C5O68_09660;Name=C5O68_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09660 PTQV01000067.1 Protein Homology CDS 114 998 . - 0 ID=cds-RJP79680.1;Parent=gene-C5O68_09660;Dbxref=NCBI_GP:RJP79680.1;Name=RJP79680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445396.1;locus_tag=C5O68_09660;product=ABC transporter ATP-binding protein;protein_id=RJP79680.1;transl_table=11 PTQV01000067.1 Genbank gene 985 1179 . - . ID=gene-C5O68_09665;Name=C5O68_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09665 PTQV01000067.1 Protein Homology CDS 985 1179 . - 0 ID=cds-RJP79681.1;Parent=gene-C5O68_09665;Dbxref=NCBI_GP:RJP79681.1;Name=RJP79681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445395.1;locus_tag=C5O68_09665;product=hypothetical protein;protein_id=RJP79681.1;transl_table=11 PTQV01000067.1 Genbank gene 1176 1382 . - . ID=gene-C5O68_09670;Name=C5O68_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09670 PTQV01000067.1 Protein Homology CDS 1176 1382 . - 0 ID=cds-RJP79682.1;Parent=gene-C5O68_09670;Dbxref=NCBI_GP:RJP79682.1;Name=RJP79682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359410.1;locus_tag=C5O68_09670;product=hypothetical protein;protein_id=RJP79682.1;transl_table=11 ##sequence-region PTQV01000068.1 1 12822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000068.1 Genbank region 1 12822 . + . ID=PTQV01000068.1:1..12822;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000068.1 Genbank gene 1 355 . - . ID=gene-C5O68_09675;Name=C5O68_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09675;partial=true;start_range=.,1 PTQV01000068.1 Protein Homology CDS 1 355 . - 0 ID=cds-RJP79629.1;Parent=gene-C5O68_09675;Dbxref=NCBI_GP:RJP79629.1;Name=RJP79629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547411.1;locus_tag=C5O68_09675;partial=true;product=DDE transposase;protein_id=RJP79629.1;start_range=.,1;transl_table=11 PTQV01000068.1 Genbank gene 534 917 . - . ID=gene-C5O68_09680;Name=C5O68_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09680 PTQV01000068.1 GeneMarkS+ CDS 534 917 . - 0 ID=cds-RJP79630.1;Parent=gene-C5O68_09680;Dbxref=NCBI_GP:RJP79630.1;Name=RJP79630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_09680;product=hypothetical protein;protein_id=RJP79630.1;transl_table=11 PTQV01000068.1 Genbank gene 999 3629 . - . ID=gene-C5O68_09685;Name=C5O68_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09685 PTQV01000068.1 Protein Homology CDS 999 3629 . - 0 ID=cds-RJP79631.1;Parent=gene-C5O68_09685;Dbxref=NCBI_GP:RJP79631.1;Name=RJP79631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477122.1;locus_tag=C5O68_09685;product=hypothetical protein;protein_id=RJP79631.1;transl_table=11 PTQV01000068.1 Genbank gene 3712 4239 . - . ID=gene-C5O68_09690;Name=C5O68_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09690 PTQV01000068.1 Protein Homology CDS 3712 4239 . - 0 ID=cds-RJP79632.1;Parent=gene-C5O68_09690;Dbxref=NCBI_GP:RJP79632.1;Name=RJP79632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000241940.1;locus_tag=C5O68_09690;product=hypothetical protein;protein_id=RJP79632.1;transl_table=11 PTQV01000068.1 Genbank gene 4348 5688 . - . ID=gene-C5O68_09695;Name=C5O68_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09695 PTQV01000068.1 Protein Homology CDS 4348 5688 . - 0 ID=cds-RJP79633.1;Parent=gene-C5O68_09695;Dbxref=NCBI_GP:RJP79633.1;Name=RJP79633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594682.1;locus_tag=C5O68_09695;product=sensor histidine kinase;protein_id=RJP79633.1;transl_table=11 PTQV01000068.1 Genbank gene 5685 6338 . - . ID=gene-C5O68_09700;Name=C5O68_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09700 PTQV01000068.1 Protein Homology CDS 5685 6338 . - 0 ID=cds-RJP79634.1;Parent=gene-C5O68_09700;Dbxref=NCBI_GP:RJP79634.1;Name=RJP79634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359589.1;locus_tag=C5O68_09700;product=DNA-binding response regulator;protein_id=RJP79634.1;transl_table=11 PTQV01000068.1 Genbank gene 6593 9025 . - . ID=gene-C5O68_09705;Name=C5O68_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09705 PTQV01000068.1 Protein Homology CDS 6593 9025 . - 0 ID=cds-RJP79635.1;Parent=gene-C5O68_09705;Dbxref=NCBI_GP:RJP79635.1;Name=RJP79635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109706.1;locus_tag=C5O68_09705;product=chaperone protein ClpB;protein_id=RJP79635.1;transl_table=11 PTQV01000068.1 Genbank gene 9027 9485 . - . ID=gene-C5O68_09710;Name=C5O68_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09710 PTQV01000068.1 Protein Homology CDS 9027 9485 . - 0 ID=cds-RJP79636.1;Parent=gene-C5O68_09710;Dbxref=NCBI_GP:RJP79636.1;Name=RJP79636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447142.1;locus_tag=C5O68_09710;product=CtsR family transcriptional regulator;protein_id=RJP79636.1;transl_table=11 PTQV01000068.1 Genbank gene 9604 10332 . - . ID=gene-C5O68_09715;Name=C5O68_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09715 PTQV01000068.1 Protein Homology CDS 9604 10332 . - 0 ID=cds-RJP79637.1;Parent=gene-C5O68_09715;Dbxref=NCBI_GP:RJP79637.1;Name=RJP79637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447143.1;locus_tag=C5O68_09715;product=nitrate ABC transporter ATP-binding protein;protein_id=RJP79637.1;transl_table=11 PTQV01000068.1 Genbank gene 10332 11339 . - . ID=gene-C5O68_09720;Name=C5O68_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09720 PTQV01000068.1 Protein Homology CDS 10332 11339 . - 0 ID=cds-RJP79638.1;Parent=gene-C5O68_09720;Dbxref=NCBI_GP:RJP79638.1;Name=RJP79638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359594.1;locus_tag=C5O68_09720;product=nitrate ABC transporter substrate-binding protein;protein_id=RJP79638.1;transl_table=11 PTQV01000068.1 Genbank gene 11377 12138 . - . ID=gene-C5O68_09725;Name=C5O68_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09725 PTQV01000068.1 Protein Homology CDS 11377 12138 . - 0 ID=cds-RJP79639.1;Parent=gene-C5O68_09725;Dbxref=NCBI_GP:RJP79639.1;Name=RJP79639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003447145.1;locus_tag=C5O68_09725;product=nitrate ABC transporter permease;protein_id=RJP79639.1;transl_table=11 PTQV01000068.1 Genbank gene 12098 12388 . - . ID=gene-C5O68_09730;Name=C5O68_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09730 PTQV01000068.1 Protein Homology CDS 12098 12388 . - 0 ID=cds-RJP79640.1;Parent=gene-C5O68_09730;Dbxref=NCBI_GP:RJP79640.1;Name=RJP79640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359596.1;locus_tag=C5O68_09730;product=hypothetical protein;protein_id=RJP79640.1;transl_table=11 PTQV01000068.1 cmsearch riboswitch 12459 12561 . - . ID=id-PTQV01000068.1:12459..12561;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch ##sequence-region PTQV01000069.1 1 1124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000069.1 Genbank region 1 1124 . + . ID=PTQV01000069.1:1..1124;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000069.1 Genbank gene 1 897 . + . ID=gene-C5O68_09735;Name=C5O68_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09735;partial=true;start_range=.,1 PTQV01000069.1 Protein Homology CDS 1 897 . + 0 ID=cds-RJP79618.1;Parent=gene-C5O68_09735;Dbxref=NCBI_GP:RJP79618.1;Name=RJP79618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=C5O68_09735;partial=true;product=IS1380-like element ISSpn5 family transposase;protein_id=RJP79618.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000006.1 1 24394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000006.1 Genbank region 1 24394 . + . ID=PTQV01000006.1:1..24394;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000006.1 Genbank gene 130 2484 . + . ID=gene-C5O68_01510;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=C5O68_01510 PTQV01000006.1 Protein Homology CDS 130 2484 . + 0 ID=cds-RJP84312.1;Parent=gene-C5O68_01510;Dbxref=NCBI_GP:RJP84312.1;Name=RJP84312.1;gbkey=CDS;gene=rnr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358472.1;locus_tag=C5O68_01510;product=ribonuclease R;protein_id=RJP84312.1;transl_table=11 PTQV01000006.1 Genbank gene 2447 2914 . + . ID=gene-C5O68_01515;Name=C5O68_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01515 PTQV01000006.1 Protein Homology CDS 2447 2914 . + 0 ID=cds-RJP84313.1;Parent=gene-C5O68_01515;Dbxref=NCBI_GP:RJP84313.1;Name=RJP84313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358473.1;locus_tag=C5O68_01515;product=SsrA-binding protein;protein_id=RJP84313.1;transl_table=11 PTQV01000006.1 Genbank pseudogene 2930 3789 . + . ID=gene-C5O68_01520;Name=C5O68_01520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01520;pseudo=true PTQV01000006.1 Protein Homology CDS 2930 3789 . + 0 ID=cds-C5O68_01520;Parent=gene-C5O68_01520;Note=with TehA confers resistance to tellurite%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446090.1;locus_tag=C5O68_01520;product=tellurite resistance methyltransferase TehB;pseudo=true;transl_table=11 PTQV01000006.1 Genbank gene 3862 4815 . + . ID=gene-C5O68_01525;Name=C5O68_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01525 PTQV01000006.1 Protein Homology CDS 3862 4815 . + 0 ID=cds-RJP84314.1;Parent=gene-C5O68_01525;Dbxref=NCBI_GP:RJP84314.1;Name=RJP84314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446092.1;locus_tag=C5O68_01525;product=competence protein CoiA;protein_id=RJP84314.1;transl_table=11 PTQV01000006.1 Genbank gene 4834 6636 . + . ID=gene-C5O68_01530;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=C5O68_01530 PTQV01000006.1 Protein Homology CDS 4834 6636 . + 0 ID=cds-RJP84315.1;Parent=gene-C5O68_01530;Dbxref=NCBI_GP:RJP84315.1;Name=RJP84315.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358476.1;locus_tag=C5O68_01530;product=oligoendopeptidase F;protein_id=RJP84315.1;transl_table=11 PTQV01000006.1 Genbank gene 6638 7351 . + . ID=gene-C5O68_01535;Name=C5O68_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01535 PTQV01000006.1 Protein Homology CDS 6638 7351 . + 0 ID=cds-RJP84331.1;Parent=gene-C5O68_01535;Dbxref=NCBI_GP:RJP84331.1;Name=RJP84331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358477.1;locus_tag=C5O68_01535;product=O-methyltransferase;protein_id=RJP84331.1;transl_table=11 PTQV01000006.1 Genbank gene 7418 8356 . + . ID=gene-C5O68_01540;Name=C5O68_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01540 PTQV01000006.1 Protein Homology CDS 7418 8356 . + 0 ID=cds-RJP84316.1;Parent=gene-C5O68_01540;Dbxref=NCBI_GP:RJP84316.1;Name=RJP84316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446095.1;locus_tag=C5O68_01540;product=foldase PrsA;protein_id=RJP84316.1;transl_table=11 PTQV01000006.1 Genbank pseudogene 8665 8760 . + . ID=gene-C5O68_01545;Name=C5O68_01545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01545;pseudo=true PTQV01000006.1 Protein Homology CDS 8665 8760 . + 0 ID=cds-C5O68_01545;Parent=gene-C5O68_01545;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=C5O68_01545;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000006.1 Genbank gene 9120 9740 . - . ID=gene-C5O68_01550;Name=C5O68_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01550 PTQV01000006.1 Protein Homology CDS 9120 9740 . - 0 ID=cds-RJP84317.1;Parent=gene-C5O68_01550;Dbxref=NCBI_GP:RJP84317.1;Name=RJP84317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358481.1;locus_tag=C5O68_01550;product=histidine phosphatase family protein;protein_id=RJP84317.1;transl_table=11 PTQV01000006.1 Genbank gene 9740 10222 . - . ID=gene-C5O68_01555;Name=C5O68_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01555 PTQV01000006.1 Protein Homology CDS 9740 10222 . - 0 ID=cds-RJP84318.1;Parent=gene-C5O68_01555;Dbxref=NCBI_GP:RJP84318.1;Name=RJP84318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446402.1;locus_tag=C5O68_01555;product=aminoacyl-tRNA deacylase;protein_id=RJP84318.1;transl_table=11 PTQV01000006.1 Genbank gene 10222 11064 . - . ID=gene-C5O68_01560;Name=C5O68_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01560 PTQV01000006.1 Protein Homology CDS 10222 11064 . - 0 ID=cds-RJP84319.1;Parent=gene-C5O68_01560;Dbxref=NCBI_GP:RJP84319.1;Name=RJP84319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358483.1;locus_tag=C5O68_01560;product=DUF368 domain-containing protein;protein_id=RJP84319.1;transl_table=11 PTQV01000006.1 Genbank gene 11159 11959 . - . ID=gene-C5O68_01565;Name=C5O68_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01565 PTQV01000006.1 Protein Homology CDS 11159 11959 . - 0 ID=cds-RJP84320.1;Parent=gene-C5O68_01565;Dbxref=NCBI_GP:RJP84320.1;Name=RJP84320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358484.1;locus_tag=C5O68_01565;product=glycosyl hydrolase family 25;protein_id=RJP84320.1;transl_table=11 PTQV01000006.1 Genbank gene 12103 13482 . + . ID=gene-C5O68_01570;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=C5O68_01570 PTQV01000006.1 Protein Homology CDS 12103 13482 . + 0 ID=cds-RJP84321.1;Parent=gene-C5O68_01570;Dbxref=NCBI_GP:RJP84321.1;Name=RJP84321.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446399.1;locus_tag=C5O68_01570;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=RJP84321.1;transl_table=11 PTQV01000006.1 Genbank gene 13492 14037 . + . ID=gene-C5O68_01575;Name=C5O68_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01575 PTQV01000006.1 Protein Homology CDS 13492 14037 . + 0 ID=cds-RJP84322.1;Parent=gene-C5O68_01575;Dbxref=NCBI_GP:RJP84322.1;Name=RJP84322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446398.1;locus_tag=C5O68_01575;product=ADP-ribose pyrophosphatase;protein_id=RJP84322.1;transl_table=11 PTQV01000006.1 Genbank gene 14049 14363 . + . ID=gene-C5O68_01580;Name=C5O68_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01580 PTQV01000006.1 Protein Homology CDS 14049 14363 . + 0 ID=cds-RJP84323.1;Parent=gene-C5O68_01580;Dbxref=NCBI_GP:RJP84323.1;Name=RJP84323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446397.1;locus_tag=C5O68_01580;product=foldase;protein_id=RJP84323.1;transl_table=11 PTQV01000006.1 Genbank gene 14380 15072 . + . ID=gene-C5O68_01585;Name=C5O68_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01585 PTQV01000006.1 Protein Homology CDS 14380 15072 . + 0 ID=cds-RJP84324.1;Parent=gene-C5O68_01585;Dbxref=NCBI_GP:RJP84324.1;Name=RJP84324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446396.1;locus_tag=C5O68_01585;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=RJP84324.1;transl_table=11 PTQV01000006.1 Genbank gene 15149 15640 . + . ID=gene-C5O68_01590;Name=C5O68_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01590 PTQV01000006.1 Protein Homology CDS 15149 15640 . + 0 ID=cds-RJP84325.1;Parent=gene-C5O68_01590;Dbxref=NCBI_GP:RJP84325.1;Name=RJP84325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358489.1;locus_tag=C5O68_01590;product=DUF536 domain-containing protein;protein_id=RJP84325.1;transl_table=11 PTQV01000006.1 Genbank gene 15738 16328 . + . ID=gene-C5O68_01595;Name=C5O68_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01595 PTQV01000006.1 Protein Homology CDS 15738 16328 . + 0 ID=cds-RJP84326.1;Parent=gene-C5O68_01595;Dbxref=NCBI_GP:RJP84326.1;Name=RJP84326.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446394.1;locus_tag=C5O68_01595;product=3'-5' exonuclease;protein_id=RJP84326.1;transl_table=11 PTQV01000006.1 Genbank gene 16331 18100 . + . ID=gene-C5O68_01600;Name=C5O68_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01600 PTQV01000006.1 Protein Homology CDS 16331 18100 . + 0 ID=cds-RJP84327.1;Parent=gene-C5O68_01600;Dbxref=NCBI_GP:RJP84327.1;Name=RJP84327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358491.1;locus_tag=C5O68_01600;product=glycerophosphodiester phosphodiesterase;protein_id=RJP84327.1;transl_table=11 PTQV01000006.1 Genbank pseudogene 18531 18800 . + . ID=gene-C5O68_01605;Name=C5O68_01605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01605;pseudo=true PTQV01000006.1 Protein Homology CDS 18531 18800 . + 0 ID=cds-C5O68_01605;Parent=gene-C5O68_01605;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284790.1;locus_tag=C5O68_01605;product=signal peptide protein;pseudo=true;transl_table=11 PTQV01000006.1 Genbank pseudogene 20600 20797 . + . ID=gene-C5O68_01610;Name=C5O68_01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01610;pseudo=true PTQV01000006.1 Protein Homology CDS 20600 20797 . + 0 ID=cds-C5O68_01610;Parent=gene-C5O68_01610;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358494.1;locus_tag=C5O68_01610;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000006.1 Genbank gene 20837 21241 . + . ID=gene-C5O68_01615;Name=C5O68_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01615 PTQV01000006.1 Protein Homology CDS 20837 21241 . + 0 ID=cds-RJP84332.1;Parent=gene-C5O68_01615;Dbxref=NCBI_GP:RJP84332.1;Name=RJP84332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358496.1;locus_tag=C5O68_01615;product=hypothetical protein;protein_id=RJP84332.1;transl_table=11 PTQV01000006.1 Genbank gene 21471 22178 . + . ID=gene-C5O68_01620;Name=C5O68_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01620 PTQV01000006.1 Protein Homology CDS 21471 22178 . + 0 ID=cds-RJP84328.1;Parent=gene-C5O68_01620;Dbxref=NCBI_GP:RJP84328.1;Name=RJP84328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358497.1;locus_tag=C5O68_01620;product=cytochrome c biogenesis protein CcdA;protein_id=RJP84328.1;transl_table=11 PTQV01000006.1 Genbank gene 22190 22747 . + . ID=gene-C5O68_01625;Name=C5O68_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01625 PTQV01000006.1 Protein Homology CDS 22190 22747 . + 0 ID=cds-RJP84329.1;Parent=gene-C5O68_01625;Dbxref=NCBI_GP:RJP84329.1;Name=RJP84329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446256.1;locus_tag=C5O68_01625;product=thioredoxin;protein_id=RJP84329.1;transl_table=11 PTQV01000006.1 Genbank gene 22870 24261 . + . ID=gene-C5O68_01630;Name=C5O68_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01630 PTQV01000006.1 Protein Homology CDS 22870 24261 . + 0 ID=cds-RJP84330.1;Parent=gene-C5O68_01630;Dbxref=NCBI_GP:RJP84330.1;Name=RJP84330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446255.1;locus_tag=C5O68_01630;product=amino acid permease;protein_id=RJP84330.1;transl_table=11 ##sequence-region PTQV01000070.1 1 32865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000070.1 Genbank region 1 32865 . + . ID=PTQV01000070.1:1..32865;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000070.1 Genbank gene 1 247 . - . ID=gene-C5O68_09740;Name=C5O68_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09740;partial=true;start_range=.,1 PTQV01000070.1 Protein Homology CDS 1 247 . - 0 ID=cds-RJP79548.1;Parent=gene-C5O68_09740;Dbxref=NCBI_GP:RJP79548.1;Name=RJP79548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445207.1;locus_tag=C5O68_09740;partial=true;product=transposase;protein_id=RJP79548.1;start_range=.,1;transl_table=11 PTQV01000070.1 Genbank gene 150 356 . - . ID=gene-C5O68_09745;Name=C5O68_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09745 PTQV01000070.1 Protein Homology CDS 150 356 . - 0 ID=cds-RJP79516.1;Parent=gene-C5O68_09745;Dbxref=NCBI_GP:RJP79516.1;Name=RJP79516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002936301.1;locus_tag=C5O68_09745;product=transposase;protein_id=RJP79516.1;transl_table=11 PTQV01000070.1 Genbank gene 410 757 . - . ID=gene-C5O68_09750;Name=C5O68_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09750 PTQV01000070.1 Protein Homology CDS 410 757 . - 0 ID=cds-RJP79517.1;Parent=gene-C5O68_09750;Dbxref=NCBI_GP:RJP79517.1;Name=RJP79517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586640.1;locus_tag=C5O68_09750;product=IS66 family insertion sequence hypothetical protein;protein_id=RJP79517.1;transl_table=11 PTQV01000070.1 Genbank pseudogene 846 923 . - . ID=gene-C5O68_09755;Name=C5O68_09755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09755;pseudo=true PTQV01000070.1 Protein Homology CDS 846 923 . - 0 ID=cds-C5O68_09755;Parent=gene-C5O68_09755;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001813067.1;locus_tag=C5O68_09755;product=cytidylate kinase;pseudo=true;transl_table=11 PTQV01000070.1 Genbank gene 1126 1977 . + . ID=gene-C5O68_09760;Name=C5O68_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09760 PTQV01000070.1 Protein Homology CDS 1126 1977 . + 0 ID=cds-RJP79518.1;Parent=gene-C5O68_09760;Dbxref=NCBI_GP:RJP79518.1;Name=RJP79518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446175.1;locus_tag=C5O68_09760;product=ribosome biogenesis GTPase YlqF;protein_id=RJP79518.1;transl_table=11 PTQV01000070.1 Genbank gene 1964 2743 . + . ID=gene-C5O68_09765;Name=C5O68_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09765 PTQV01000070.1 Protein Homology CDS 1964 2743 . + 0 ID=cds-RJP79519.1;Parent=gene-C5O68_09765;Dbxref=NCBI_GP:RJP79519.1;Name=RJP79519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446174.1;locus_tag=C5O68_09765;product=ribonuclease HII;protein_id=RJP79519.1;transl_table=11 PTQV01000070.1 Genbank gene 2759 4309 . + . ID=gene-C5O68_09770;Name=C5O68_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09770 PTQV01000070.1 Protein Homology CDS 2759 4309 . + 0 ID=cds-RJP79520.1;Parent=gene-C5O68_09770;Dbxref=NCBI_GP:RJP79520.1;Name=RJP79520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446173.1;locus_tag=C5O68_09770;product=ClC family H(+)/Cl(-) exchange transporter;protein_id=RJP79520.1;transl_table=11 PTQV01000070.1 Genbank gene 4425 4604 . + . ID=gene-C5O68_09775;Name=C5O68_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09775 PTQV01000070.1 Protein Homology CDS 4425 4604 . + 0 ID=cds-RJP79521.1;Parent=gene-C5O68_09775;Dbxref=NCBI_GP:RJP79521.1;Name=RJP79521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009322.1;locus_tag=C5O68_09775;product=hypothetical protein;protein_id=RJP79521.1;transl_table=11 PTQV01000070.1 Genbank gene 4862 5932 . + . ID=gene-C5O68_09780;Name=C5O68_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09780 PTQV01000070.1 Protein Homology CDS 4862 5932 . + 0 ID=cds-RJP79522.1;Parent=gene-C5O68_09780;Dbxref=NCBI_GP:RJP79522.1;Name=RJP79522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446171.1;locus_tag=C5O68_09780;product=tyrosine recombinase XerS;protein_id=RJP79522.1;transl_table=11 PTQV01000070.1 Genbank gene 6145 7353 . - . ID=gene-C5O68_09785;Name=C5O68_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09785 PTQV01000070.1 Protein Homology CDS 6145 7353 . - 0 ID=cds-RJP79523.1;Parent=gene-C5O68_09785;Dbxref=NCBI_GP:RJP79523.1;Name=RJP79523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276616.1;locus_tag=C5O68_09785;product=MATE family efflux transporter;protein_id=RJP79523.1;transl_table=11 PTQV01000070.1 Genbank gene 7364 7624 . - . ID=gene-C5O68_09790;Name=C5O68_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09790 PTQV01000070.1 Protein Homology CDS 7364 7624 . - 0 ID=cds-RJP79524.1;Parent=gene-C5O68_09790;Dbxref=NCBI_GP:RJP79524.1;Name=RJP79524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016398086.1;locus_tag=C5O68_09790;product=hypothetical protein;protein_id=RJP79524.1;transl_table=11 PTQV01000070.1 Genbank gene 7638 8906 . - . ID=gene-C5O68_09795;Name=C5O68_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09795 PTQV01000070.1 Protein Homology CDS 7638 8906 . - 0 ID=cds-RJP79525.1;Parent=gene-C5O68_09795;Dbxref=NCBI_GP:RJP79525.1;Name=RJP79525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358647.1;locus_tag=C5O68_09795;product=dihydroorotase;protein_id=RJP79525.1;transl_table=11 PTQV01000070.1 Genbank gene 8919 9383 . - . ID=gene-C5O68_09800;Name=C5O68_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09800 PTQV01000070.1 Protein Homology CDS 8919 9383 . - 0 ID=cds-RJP79526.1;Parent=gene-C5O68_09800;Dbxref=NCBI_GP:RJP79526.1;Name=RJP79526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446168.1;locus_tag=C5O68_09800;product=DNA mismatch repair protein MutT;protein_id=RJP79526.1;transl_table=11 PTQV01000070.1 Genbank gene 9393 10046 . - . ID=gene-C5O68_09805;Name=C5O68_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09805 PTQV01000070.1 Protein Homology CDS 9393 10046 . - 0 ID=cds-RJP79527.1;Parent=gene-C5O68_09805;Dbxref=NCBI_GP:RJP79527.1;Name=RJP79527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446167.1;locus_tag=C5O68_09805;product=uracil-DNA glycosylase;protein_id=RJP79527.1;transl_table=11 PTQV01000070.1 Genbank gene 10108 10800 . - . ID=gene-C5O68_09810;Name=C5O68_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09810 PTQV01000070.1 Protein Homology CDS 10108 10800 . - 0 ID=cds-RJP79528.1;Parent=gene-C5O68_09810;Dbxref=NCBI_GP:RJP79528.1;Name=RJP79528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446166.1;locus_tag=C5O68_09810;product=noncanonical pyrimidine nucleotidase%2C YjjG family;protein_id=RJP79528.1;transl_table=11 PTQV01000070.1 Genbank gene 10919 11131 . - . ID=gene-C5O68_09815;Name=C5O68_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09815 PTQV01000070.1 Protein Homology CDS 10919 11131 . - 0 ID=cds-RJP79549.1;Parent=gene-C5O68_09815;Dbxref=NCBI_GP:RJP79549.1;Name=RJP79549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014185.1;locus_tag=C5O68_09815;product=hypothetical protein;protein_id=RJP79549.1;transl_table=11 PTQV01000070.1 Genbank gene 11180 11392 . - . ID=gene-C5O68_09820;Name=C5O68_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09820 PTQV01000070.1 Protein Homology CDS 11180 11392 . - 0 ID=cds-RJP79529.1;Parent=gene-C5O68_09820;Dbxref=NCBI_GP:RJP79529.1;Name=RJP79529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000989849.1;locus_tag=C5O68_09820;product=hypothetical protein;protein_id=RJP79529.1;transl_table=11 PTQV01000070.1 Genbank gene 11504 11683 . - . ID=gene-C5O68_09825;Name=C5O68_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09825 PTQV01000070.1 Protein Homology CDS 11504 11683 . - 0 ID=cds-RJP79550.1;Parent=gene-C5O68_09825;Dbxref=NCBI_GP:RJP79550.1;Name=RJP79550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475581.1;locus_tag=C5O68_09825;product=hypothetical protein;protein_id=RJP79550.1;transl_table=11 PTQV01000070.1 Genbank pseudogene 12055 12363 . - . ID=gene-C5O68_09830;Name=C5O68_09830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09830;pseudo=true PTQV01000070.1 Protein Homology CDS 12055 12363 . - 0 ID=cds-C5O68_09830;Parent=gene-C5O68_09830;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446164.1;locus_tag=C5O68_09830;product=dihydroxyacetone kinase subunit L;pseudo=true;transl_table=11 PTQV01000070.1 Genbank gene 12385 13374 . - . ID=gene-C5O68_09835;Name=C5O68_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09835 PTQV01000070.1 Protein Homology CDS 12385 13374 . - 0 ID=cds-RJP79530.1;Parent=gene-C5O68_09835;Dbxref=NCBI_GP:RJP79530.1;Name=RJP79530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446163.1;locus_tag=C5O68_09835;product=dihydroxyacetone kinase subunit DhaK;protein_id=RJP79530.1;transl_table=11 PTQV01000070.1 Genbank pseudogene 13528 14057 . + . ID=gene-C5O68_09840;Name=C5O68_09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09840;pseudo=true PTQV01000070.1 Protein Homology CDS 13528 14057 . + 0 ID=cds-C5O68_09840;Parent=gene-C5O68_09840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446162.1;locus_tag=C5O68_09840;product=dihydroxyacetone kinase transcriptional activator DhaS;pseudo=true;transl_table=11 PTQV01000070.1 Genbank gene 14054 15043 . + . ID=gene-C5O68_09845;Name=dhaK2;gbkey=Gene;gene=dhaK2;gene_biotype=protein_coding;locus_tag=C5O68_09845 PTQV01000070.1 Protein Homology CDS 14054 15043 . + 0 ID=cds-RJP79531.1;Parent=gene-C5O68_09845;Dbxref=NCBI_GP:RJP79531.1;Name=RJP79531.1;gbkey=CDS;gene=dhaK2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446161.1;locus_tag=C5O68_09845;product=DhaKLM operon coactivator DhaQ;protein_id=RJP79531.1;transl_table=11 PTQV01000070.1 Genbank gene 15316 17049 . - . ID=gene-C5O68_09850;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=C5O68_09850 PTQV01000070.1 Protein Homology CDS 15316 17049 . - 0 ID=cds-RJP79532.1;Parent=gene-C5O68_09850;Dbxref=NCBI_GP:RJP79532.1;Name=RJP79532.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446158.1;locus_tag=C5O68_09850;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=RJP79532.1;transl_table=11 PTQV01000070.1 Genbank gene 17055 17318 . - . ID=gene-C5O68_09855;Name=C5O68_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09855 PTQV01000070.1 Protein Homology CDS 17055 17318 . - 0 ID=cds-RJP79533.1;Parent=gene-C5O68_09855;Dbxref=NCBI_GP:RJP79533.1;Name=RJP79533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019775469.1;locus_tag=C5O68_09855;product=phosphocarrier protein HPr;protein_id=RJP79533.1;transl_table=11 PTQV01000070.1 Genbank gene 17668 17886 . + . ID=gene-C5O68_09860;Name=C5O68_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09860 PTQV01000070.1 Protein Homology CDS 17668 17886 . + 0 ID=cds-RJP79534.1;Parent=gene-C5O68_09860;Dbxref=NCBI_GP:RJP79534.1;Name=RJP79534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446156.1;locus_tag=C5O68_09860;product=glutaredoxin-like protein NrdH;protein_id=RJP79534.1;transl_table=11 PTQV01000070.1 Genbank gene 17967 20126 . + . ID=gene-C5O68_09865;Name=C5O68_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09865 PTQV01000070.1 Protein Homology CDS 17967 20126 . + 0 ID=cds-RJP79535.1;Parent=gene-C5O68_09865;Dbxref=NCBI_GP:RJP79535.1;Name=RJP79535.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000523276.1;locus_tag=C5O68_09865;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=RJP79535.1;transl_table=11 PTQV01000070.1 Genbank gene 20314 21276 . + . ID=gene-C5O68_09870;Name=C5O68_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09870 PTQV01000070.1 Protein Homology CDS 20314 21276 . + 0 ID=cds-RJP79536.1;Parent=gene-C5O68_09870;Dbxref=NCBI_GP:RJP79536.1;Name=RJP79536.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358660.1;locus_tag=C5O68_09870;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=RJP79536.1;transl_table=11 PTQV01000070.1 Genbank gene 21609 22370 . + . ID=gene-C5O68_09875;Name=C5O68_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09875 PTQV01000070.1 Protein Homology CDS 21609 22370 . + 0 ID=cds-RJP79537.1;Parent=gene-C5O68_09875;Dbxref=NCBI_GP:RJP79537.1;Name=RJP79537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358661.1;locus_tag=C5O68_09875;product=DeoR/GlpR transcriptional regulator;protein_id=RJP79537.1;transl_table=11 PTQV01000070.1 Genbank gene 22653 22910 . - . ID=gene-C5O68_09880;Name=C5O68_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09880 PTQV01000070.1 Protein Homology CDS 22653 22910 . - 0 ID=cds-RJP79538.1;Parent=gene-C5O68_09880;Dbxref=NCBI_GP:RJP79538.1;Name=RJP79538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446152.1;locus_tag=C5O68_09880;product=DUF3884 domain-containing protein;protein_id=RJP79538.1;transl_table=11 PTQV01000070.1 Genbank gene 22952 24358 . - . ID=gene-C5O68_09885;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=C5O68_09885 PTQV01000070.1 Protein Homology CDS 22952 24358 . - 0 ID=cds-RJP79539.1;Parent=gene-C5O68_09885;Dbxref=NCBI_GP:RJP79539.1;Name=RJP79539.1;gbkey=CDS;gene=lacG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446151.1;locus_tag=C5O68_09885;product=6-phospho-beta-galactosidase;protein_id=RJP79539.1;transl_table=11 PTQV01000070.1 Genbank gene 24573 26264 . - . ID=gene-C5O68_09890;Name=C5O68_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09890 PTQV01000070.1 Protein Homology CDS 24573 26264 . - 0 ID=cds-RJP79540.1;Parent=gene-C5O68_09890;Dbxref=NCBI_GP:RJP79540.1;Name=RJP79540.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358663.1;locus_tag=C5O68_09890;product=PTS lactose transporter subunit IIBC;protein_id=RJP79540.1;transl_table=11 PTQV01000070.1 Genbank gene 26264 26581 . - . ID=gene-C5O68_09895;Name=C5O68_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09895 PTQV01000070.1 Protein Homology CDS 26264 26581 . - 0 ID=cds-RJP79541.1;Parent=gene-C5O68_09895;Dbxref=NCBI_GP:RJP79541.1;Name=RJP79541.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358664.1;locus_tag=C5O68_09895;product=PTS lactose transporter subunit IIA;protein_id=RJP79541.1;transl_table=11 PTQV01000070.1 Genbank gene 26616 27452 . - . ID=gene-C5O68_09900;Name=C5O68_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09900 PTQV01000070.1 Protein Homology CDS 26616 27452 . - 0 ID=cds-RJP79542.1;Parent=gene-C5O68_09900;Dbxref=NCBI_GP:RJP79542.1;Name=RJP79542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446148.1;locus_tag=C5O68_09900;product=transcription antiterminator;protein_id=RJP79542.1;transl_table=11 PTQV01000070.1 Genbank gene 27849 28325 . - . ID=gene-C5O68_09905;Name=C5O68_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09905 PTQV01000070.1 Protein Homology CDS 27849 28325 . - 0 ID=cds-RJP79551.1;Parent=gene-C5O68_09905;Dbxref=NCBI_GP:RJP79551.1;Name=RJP79551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001849973.1;locus_tag=C5O68_09905;product=hypothetical protein;protein_id=RJP79551.1;transl_table=11 PTQV01000070.1 Genbank gene 28726 29706 . - . ID=gene-C5O68_09910;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=C5O68_09910 PTQV01000070.1 Protein Homology CDS 28726 29706 . - 0 ID=cds-RJP79543.1;Parent=gene-C5O68_09910;Dbxref=NCBI_GP:RJP79543.1;Name=RJP79543.1;gbkey=CDS;gene=lacD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358666.1;locus_tag=C5O68_09910;product=tagatose-bisphosphate aldolase;protein_id=RJP79543.1;transl_table=11 PTQV01000070.1 Genbank gene 29708 30637 . - . ID=gene-C5O68_09915;Name=C5O68_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09915 PTQV01000070.1 Protein Homology CDS 29708 30637 . - 0 ID=cds-RJP79544.1;Parent=gene-C5O68_09915;Dbxref=NCBI_GP:RJP79544.1;Name=RJP79544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358667.1;locus_tag=C5O68_09915;product=tagatose-6-phosphate kinase;protein_id=RJP79544.1;transl_table=11 PTQV01000070.1 Genbank gene 30648 31163 . - . ID=gene-C5O68_09920;Name=C5O68_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09920 PTQV01000070.1 Protein Homology CDS 30648 31163 . - 0 ID=cds-RJP79545.1;Parent=gene-C5O68_09920;Dbxref=NCBI_GP:RJP79545.1;Name=RJP79545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358668.1;locus_tag=C5O68_09920;product=galactose-6-phosphate isomerase subunit LacB;protein_id=RJP79545.1;transl_table=11 PTQV01000070.1 Genbank gene 31312 31737 . - . ID=gene-C5O68_09925;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=C5O68_09925 PTQV01000070.1 Protein Homology CDS 31312 31737 . - 0 ID=cds-RJP79546.1;Parent=gene-C5O68_09925;Dbxref=NCBI_GP:RJP79546.1;Name=RJP79546.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446138.1;locus_tag=C5O68_09925;product=galactose-6-phosphate isomerase subunit LacA;protein_id=RJP79546.1;transl_table=11 PTQV01000070.1 Genbank gene 31894 32790 . - . ID=gene-C5O68_09930;Name=C5O68_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09930 PTQV01000070.1 Protein Homology CDS 31894 32790 . - 0 ID=cds-RJP79547.1;Parent=gene-C5O68_09930;Dbxref=NCBI_GP:RJP79547.1;Name=RJP79547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000234238.1;locus_tag=C5O68_09930;product=protein lacX;protein_id=RJP79547.1;transl_table=11 ##sequence-region PTQV01000071.1 1 28197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000071.1 Genbank region 1 28197 . + . ID=PTQV01000071.1:1..28197;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000071.1 Genbank gene 269 1186 . + . ID=gene-C5O68_09935;Name=C5O68_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09935 PTQV01000071.1 Protein Homology CDS 269 1186 . + 0 ID=cds-RJP79322.1;Parent=gene-C5O68_09935;Dbxref=NCBI_GP:RJP79322.1;Name=RJP79322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446254.1;locus_tag=C5O68_09935;product=adhesion protein;protein_id=RJP79322.1;transl_table=11 PTQV01000071.1 Genbank gene 1194 4286 . + . ID=gene-C5O68_09940;Name=C5O68_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09940 PTQV01000071.1 Protein Homology CDS 1194 4286 . + 0 ID=cds-RJP79323.1;Parent=gene-C5O68_09940;Dbxref=NCBI_GP:RJP79323.1;Name=RJP79323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700503.1;locus_tag=C5O68_09940;product=pneumococcal histidine triad protein B;protein_id=RJP79323.1;transl_table=11 PTQV01000071.1 Genbank gene 4602 7721 . + . ID=gene-C5O68_09945;Name=phtE;gbkey=Gene;gene=phtE;gene_biotype=protein_coding;locus_tag=C5O68_09945 PTQV01000071.1 Protein Homology CDS 4602 7721 . + 0 ID=cds-RJP79324.1;Parent=gene-C5O68_09945;Dbxref=NCBI_GP:RJP79324.1;Name=RJP79324.1;gbkey=CDS;gene=phtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358502.1;locus_tag=C5O68_09945;product=pneumococcal histidine triad protein PhtE;protein_id=RJP79324.1;transl_table=11 PTQV01000071.1 Genbank pseudogene 7951 8514 . + . ID=gene-C5O68_09950;Name=C5O68_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09950;pseudo=true PTQV01000071.1 Protein Homology CDS 7951 8514 . + 0 ID=cds-C5O68_09950;Parent=gene-C5O68_09950;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731455.1;locus_tag=C5O68_09950;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000071.1 Genbank pseudogene 8537 8963 . + . ID=gene-C5O68_09955;Name=C5O68_09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_09955;pseudo=true PTQV01000071.1 Protein Homology CDS 8537 8963 . + 0 ID=cds-C5O68_09955;Parent=gene-C5O68_09955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006145489.1;locus_tag=C5O68_09955;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000071.1 Genbank gene 9234 9431 . - . ID=gene-C5O68_09960;Name=C5O68_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09960 PTQV01000071.1 Protein Homology CDS 9234 9431 . - 0 ID=cds-RJP79325.1;Parent=gene-C5O68_09960;Dbxref=NCBI_GP:RJP79325.1;Name=RJP79325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844654.1;locus_tag=C5O68_09960;product=hypothetical protein;protein_id=RJP79325.1;transl_table=11 PTQV01000071.1 Genbank gene 9396 10025 . + . ID=gene-C5O68_09965;Name=C5O68_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09965 PTQV01000071.1 Protein Homology CDS 9396 10025 . + 0 ID=cds-RJP79326.1;Parent=gene-C5O68_09965;Dbxref=NCBI_GP:RJP79326.1;Name=RJP79326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358506.1;locus_tag=C5O68_09965;product=hypothetical protein;protein_id=RJP79326.1;transl_table=11 PTQV01000071.1 Genbank gene 10061 11284 . - . ID=gene-C5O68_09970;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=C5O68_09970 PTQV01000071.1 Protein Homology CDS 10061 11284 . - 0 ID=cds-RJP79327.1;Parent=gene-C5O68_09970;Dbxref=NCBI_GP:RJP79327.1;Name=RJP79327.1;gbkey=CDS;gene=pepT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446250.1;locus_tag=C5O68_09970;product=peptidase T;protein_id=RJP79327.1;transl_table=11 PTQV01000071.1 Genbank gene 11431 12525 . + . ID=gene-C5O68_09975;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=C5O68_09975 PTQV01000071.1 Protein Homology CDS 11431 12525 . + 0 ID=cds-RJP79328.1;Parent=gene-C5O68_09975;Dbxref=NCBI_GP:RJP79328.1;Name=RJP79328.1;gbkey=CDS;gene=hemH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358508.1;locus_tag=C5O68_09975;product=ferrochelatase;protein_id=RJP79328.1;transl_table=11 PTQV01000071.1 Genbank gene 12571 12948 . - . ID=gene-C5O68_09980;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=C5O68_09980 PTQV01000071.1 Protein Homology CDS 12571 12948 . - 0 ID=cds-RJP79329.1;Parent=gene-C5O68_09980;Dbxref=NCBI_GP:RJP79329.1;Name=RJP79329.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358509.1;locus_tag=C5O68_09980;product=large conductance mechanosensitive channel protein MscL;protein_id=RJP79329.1;transl_table=11 PTQV01000071.1 Genbank gene 13030 13461 . - . ID=gene-C5O68_09985;Name=C5O68_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09985 PTQV01000071.1 Protein Homology CDS 13030 13461 . - 0 ID=cds-RJP79330.1;Parent=gene-C5O68_09985;Dbxref=NCBI_GP:RJP79330.1;Name=RJP79330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358510.1;locus_tag=C5O68_09985;product=GtrA family protein;protein_id=RJP79330.1;transl_table=11 PTQV01000071.1 cmsearch riboswitch 13490 13586 . + . ID=id-PTQV01000071.1:13490..13586;Dbxref=RFAM:RF01054;Note=PreQ1 riboswitch class II;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch PTQV01000071.1 Genbank gene 13584 14093 . + . ID=gene-C5O68_09990;Name=C5O68_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_09990 PTQV01000071.1 Protein Homology CDS 13584 14093 . + 0 ID=cds-RJP79331.1;Parent=gene-C5O68_09990;Dbxref=NCBI_GP:RJP79331.1;Name=RJP79331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446246.1;locus_tag=C5O68_09990;product=queuosine transporter QueT;protein_id=RJP79331.1;transl_table=11 PTQV01000071.1 Genbank gene 14193 14265 . + . ID=gene-C5O68_09995;Name=C5O68_09995;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_09995 PTQV01000071.1 tRNAscan-SE tRNA 14193 14265 . + . ID=rna-C5O68_09995;Parent=gene-C5O68_09995;anticodon=(pos:14226..14228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_09995;product=tRNA-Thr PTQV01000071.1 tRNAscan-SE exon 14193 14265 . + . ID=exon-C5O68_09995-1;Parent=rna-C5O68_09995;anticodon=(pos:14226..14228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_09995;product=tRNA-Thr PTQV01000071.1 Genbank gene 14608 15684 . + . ID=gene-C5O68_10000;Name=C5O68_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10000 PTQV01000071.1 Protein Homology CDS 14608 15684 . + 0 ID=cds-RJP79332.1;Parent=gene-C5O68_10000;Dbxref=NCBI_GP:RJP79332.1;Name=RJP79332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542485.1;locus_tag=C5O68_10000;product=aspartate-semialdehyde dehydrogenase;protein_id=RJP79332.1;transl_table=11 PTQV01000071.1 Genbank gene 15740 16675 . + . ID=gene-C5O68_10005;Name=C5O68_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10005 PTQV01000071.1 Protein Homology CDS 15740 16675 . + 0 ID=cds-RJP79333.1;Parent=gene-C5O68_10005;Dbxref=NCBI_GP:RJP79333.1;Name=RJP79333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446244.1;locus_tag=C5O68_10005;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=RJP79333.1;transl_table=11 PTQV01000071.1 Genbank gene 16722 18095 . - . ID=gene-C5O68_10010;Name=C5O68_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10010 PTQV01000071.1 Protein Homology CDS 16722 18095 . - 0 ID=cds-RJP79334.1;Parent=gene-C5O68_10010;Dbxref=NCBI_GP:RJP79334.1;Name=RJP79334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358514.2;locus_tag=C5O68_10010;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=RJP79334.1;transl_table=11 PTQV01000071.1 Genbank gene 18233 18415 . - . ID=gene-C5O68_10015;Name=C5O68_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10015 PTQV01000071.1 Protein Homology CDS 18233 18415 . - 0 ID=cds-RJP79335.1;Parent=gene-C5O68_10015;Dbxref=NCBI_GP:RJP79335.1;Name=RJP79335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358515.1;locus_tag=C5O68_10015;product=tautomerase;protein_id=RJP79335.1;transl_table=11 PTQV01000071.1 Genbank gene 18539 19129 . + . ID=gene-C5O68_10020;Name=C5O68_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10020 PTQV01000071.1 Protein Homology CDS 18539 19129 . + 0 ID=cds-RJP79336.1;Parent=gene-C5O68_10020;Dbxref=NCBI_GP:RJP79336.1;Name=RJP79336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068157.1;locus_tag=C5O68_10020;product=thymidine kinase;protein_id=RJP79336.1;transl_table=11 PTQV01000071.1 Genbank gene 19126 20205 . + . ID=gene-C5O68_10025;Name=C5O68_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10025 PTQV01000071.1 Protein Homology CDS 19126 20205 . + 0 ID=cds-RJP79337.1;Parent=gene-C5O68_10025;Dbxref=NCBI_GP:RJP79337.1;Name=RJP79337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358518.1;locus_tag=C5O68_10025;product=peptide chain release factor 1;protein_id=RJP79337.1;transl_table=11 PTQV01000071.1 Genbank gene 20205 21041 . + . ID=gene-C5O68_10030;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=C5O68_10030 PTQV01000071.1 Protein Homology CDS 20205 21041 . + 0 ID=cds-RJP79338.1;Parent=gene-C5O68_10030;Dbxref=NCBI_GP:RJP79338.1;Name=RJP79338.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358519.1;locus_tag=C5O68_10030;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=RJP79338.1;transl_table=11 PTQV01000071.1 Genbank gene 21016 21627 . + . ID=gene-C5O68_10035;Name=C5O68_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10035 PTQV01000071.1 Protein Homology CDS 21016 21627 . + 0 ID=cds-RJP79339.1;Parent=gene-C5O68_10035;Dbxref=NCBI_GP:RJP79339.1;Name=RJP79339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358520.1;locus_tag=C5O68_10035;product=threonylcarbamoyl-AMP synthase;protein_id=RJP79339.1;transl_table=11 PTQV01000071.1 Genbank gene 21629 22060 . + . ID=gene-C5O68_10040;Name=C5O68_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10040 PTQV01000071.1 Protein Homology CDS 21629 22060 . + 0 ID=cds-RJP79340.1;Parent=gene-C5O68_10040;Dbxref=NCBI_GP:RJP79340.1;Name=RJP79340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446236.1;locus_tag=C5O68_10040;product=GNAT family N-acetyltransferase;protein_id=RJP79340.1;transl_table=11 PTQV01000071.1 Genbank gene 22123 23379 . + . ID=gene-C5O68_10045;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=C5O68_10045 PTQV01000071.1 Protein Homology CDS 22123 23379 . + 0 ID=cds-RJP79341.1;Parent=gene-C5O68_10045;Dbxref=NCBI_GP:RJP79341.1;Name=RJP79341.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446235.1;locus_tag=C5O68_10045;product=serine hydroxymethyltransferase;protein_id=RJP79341.1;transl_table=11 PTQV01000071.1 Genbank gene 23354 24361 . + . ID=gene-C5O68_10050;Name=C5O68_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10050 PTQV01000071.1 Protein Homology CDS 23354 24361 . + 0 ID=cds-RJP79342.1;Parent=gene-C5O68_10050;Dbxref=NCBI_GP:RJP79342.1;Name=RJP79342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358523.1;locus_tag=C5O68_10050;product=nucleoid-associated bacterial family protein;protein_id=RJP79342.1;transl_table=11 PTQV01000071.1 Genbank gene 24361 24975 . + . ID=gene-C5O68_10055;Name=C5O68_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10055 PTQV01000071.1 Protein Homology CDS 24361 24975 . + 0 ID=cds-RJP79343.1;Parent=gene-C5O68_10055;Dbxref=NCBI_GP:RJP79343.1;Name=RJP79343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446233.1;locus_tag=C5O68_10055;product=lysozyme family protein;protein_id=RJP79343.1;transl_table=11 PTQV01000071.1 Genbank gene 25049 26023 . + . ID=gene-C5O68_10060;Name=C5O68_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10060 PTQV01000071.1 Protein Homology CDS 25049 26023 . + 0 ID=cds-RJP79344.1;Parent=gene-C5O68_10060;Dbxref=NCBI_GP:RJP79344.1;Name=RJP79344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358525.1;locus_tag=C5O68_10060;product=DUF1002 domain-containing protein;protein_id=RJP79344.1;transl_table=11 PTQV01000071.1 Genbank gene 26097 27656 . + . ID=gene-C5O68_10065;Name=C5O68_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10065 PTQV01000071.1 Protein Homology CDS 26097 27656 . + 0 ID=cds-RJP79345.1;Parent=gene-C5O68_10065;Dbxref=NCBI_GP:RJP79345.1;Name=RJP79345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000914590.1;locus_tag=C5O68_10065;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=RJP79345.1;transl_table=11 PTQV01000071.1 Genbank gene 27927 28197 . + . ID=gene-C5O68_10070;Name=C5O68_10070;end_range=28197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10070;partial=true PTQV01000071.1 Protein Homology CDS 27927 28197 . + 0 ID=cds-RJP79346.1;Parent=gene-C5O68_10070;Dbxref=NCBI_GP:RJP79346.1;Name=RJP79346.1;end_range=28197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008719803.1;locus_tag=C5O68_10070;partial=true;product=hypothetical protein;protein_id=RJP79346.1;transl_table=11 ##sequence-region PTQV01000072.1 1 7044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000072.1 Genbank region 1 7044 . + . ID=PTQV01000072.1:1..7044;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000072.1 Genbank gene 214 1569 . - . ID=gene-C5O68_10075;Name=C5O68_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10075 PTQV01000072.1 Protein Homology CDS 214 1569 . - 0 ID=cds-RJP79316.1;Parent=gene-C5O68_10075;Dbxref=NCBI_GP:RJP79316.1;Name=RJP79316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050288.1;locus_tag=C5O68_10075;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=RJP79316.1;transl_table=11 PTQV01000072.1 Genbank gene 1626 2402 . + . ID=gene-C5O68_10080;Name=C5O68_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10080 PTQV01000072.1 Protein Homology CDS 1626 2402 . + 0 ID=cds-RJP79317.1;Parent=gene-C5O68_10080;Dbxref=NCBI_GP:RJP79317.1;Name=RJP79317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001086342.1;locus_tag=C5O68_10080;product=aminoglycoside 3'-phosphotransferase;protein_id=RJP79317.1;transl_table=11 PTQV01000072.1 Genbank gene 2412 3188 . + . ID=gene-C5O68_10085;Name=C5O68_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10085 PTQV01000072.1 Protein Homology CDS 2412 3188 . + 0 ID=cds-RJP79318.1;Parent=gene-C5O68_10085;Dbxref=NCBI_GP:RJP79318.1;Name=RJP79318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359310.2;locus_tag=C5O68_10085;product=recombination regulator RecX;protein_id=RJP79318.1;transl_table=11 PTQV01000072.1 Genbank gene 3277 3810 . + . ID=gene-C5O68_10090;Name=C5O68_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10090 PTQV01000072.1 Protein Homology CDS 3277 3810 . + 0 ID=cds-RJP79319.1;Parent=gene-C5O68_10090;Dbxref=NCBI_GP:RJP79319.1;Name=RJP79319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000775318.1;locus_tag=C5O68_10090;product=DUF402 domain-containing protein;protein_id=RJP79319.1;transl_table=11 PTQV01000072.1 Genbank gene 4160 5017 . - . ID=gene-C5O68_10095;Name=C5O68_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10095 PTQV01000072.1 Protein Homology CDS 4160 5017 . - 0 ID=cds-RJP79320.1;Parent=gene-C5O68_10095;Dbxref=NCBI_GP:RJP79320.1;Name=RJP79320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445625.1;locus_tag=C5O68_10095;product=transcriptional regulator;protein_id=RJP79320.1;transl_table=11 PTQV01000072.1 Genbank gene 5029 5802 . - . ID=gene-C5O68_10100;Name=C5O68_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10100 PTQV01000072.1 Protein Homology CDS 5029 5802 . - 0 ID=cds-RJP79321.1;Parent=gene-C5O68_10100;Dbxref=NCBI_GP:RJP79321.1;Name=RJP79321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445624.1;locus_tag=C5O68_10100;product=class I SAM-dependent methyltransferase;protein_id=RJP79321.1;transl_table=11 PTQV01000072.1 Genbank pseudogene 5994 6192 . - . ID=gene-C5O68_10105;Name=C5O68_10105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10105;pseudo=true PTQV01000072.1 Protein Homology CDS 5994 6192 . - 0 ID=cds-C5O68_10105;Parent=gene-C5O68_10105;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001845656.1;locus_tag=C5O68_10105;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000072.1 Genbank pseudogene 6201 6968 . - . ID=gene-C5O68_10110;Name=C5O68_10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10110;pseudo=true PTQV01000072.1 Protein Homology CDS 6201 6968 . - 0 ID=cds-C5O68_10110;Parent=gene-C5O68_10110;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445623.1;locus_tag=C5O68_10110;product=DNA integration/recombination/inversion protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000073.1 1 13542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000073.1 Genbank region 1 13542 . + . ID=PTQV01000073.1:1..13542;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000073.1 Genbank gene 104 913 . - . ID=gene-C5O68_10115;Name=C5O68_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10115 PTQV01000073.1 Protein Homology CDS 104 913 . - 0 ID=cds-RJP79244.1;Parent=gene-C5O68_10115;Dbxref=NCBI_GP:RJP79244.1;Name=RJP79244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358745.1;locus_tag=C5O68_10115;product=phosphorylcholine transferase LicD;protein_id=RJP79244.1;transl_table=11 PTQV01000073.1 Genbank gene 915 1718 . - . ID=gene-C5O68_10120;Name=C5O68_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10120 PTQV01000073.1 Protein Homology CDS 915 1718 . - 0 ID=cds-RJP79245.1;Parent=gene-C5O68_10120;Dbxref=NCBI_GP:RJP79245.1;Name=RJP79245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358744.1;locus_tag=C5O68_10120;product=phosphorylcholine transferase LicD;protein_id=RJP79245.1;transl_table=11 PTQV01000073.1 Genbank gene 1728 3215 . - . ID=gene-C5O68_10125;Name=C5O68_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10125 PTQV01000073.1 Protein Homology CDS 1728 3215 . - 0 ID=cds-RJP79246.1;Parent=gene-C5O68_10125;Dbxref=NCBI_GP:RJP79246.1;Name=RJP79246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358743.1;locus_tag=C5O68_10125;product=virulence factor MviN;protein_id=RJP79246.1;transl_table=11 PTQV01000073.1 Genbank pseudogene 3272 3346 . + . ID=gene-C5O68_10130;Name=C5O68_10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10130;pseudo=true PTQV01000073.1 Protein Homology CDS 3272 3346 . + 0 ID=cds-C5O68_10130;Parent=gene-C5O68_10130;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_10130;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000073.1 Genbank gene 3655 4362 . + . ID=gene-C5O68_10135;Name=C5O68_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10135 PTQV01000073.1 Protein Homology CDS 3655 4362 . + 0 ID=cds-RJP79247.1;Parent=gene-C5O68_10135;Dbxref=NCBI_GP:RJP79247.1;Name=RJP79247.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358742.1;locus_tag=C5O68_10135;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=RJP79247.1;transl_table=11 PTQV01000073.1 Genbank gene 4367 5389 . + . ID=gene-C5O68_10140;Name=C5O68_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10140 PTQV01000073.1 Protein Homology CDS 4367 5389 . + 0 ID=cds-RJP79248.1;Parent=gene-C5O68_10140;Dbxref=NCBI_GP:RJP79248.1;Name=RJP79248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446337.1;locus_tag=C5O68_10140;product=ribitol-5-phosphate dehydrogenase;protein_id=RJP79248.1;transl_table=11 PTQV01000073.1 Genbank gene 5406 6275 . + . ID=gene-C5O68_10145;Name=C5O68_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10145 PTQV01000073.1 Protein Homology CDS 5406 6275 . + 0 ID=cds-RJP79249.1;Parent=gene-C5O68_10145;Dbxref=NCBI_GP:RJP79249.1;Name=RJP79249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358740.1;locus_tag=C5O68_10145;product=choline kinase;protein_id=RJP79249.1;transl_table=11 PTQV01000073.1 Genbank gene 6265 7143 . + . ID=gene-C5O68_10150;Name=C5O68_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10150 PTQV01000073.1 Protein Homology CDS 6265 7143 . + 0 ID=cds-RJP79250.1;Parent=gene-C5O68_10150;Dbxref=NCBI_GP:RJP79250.1;Name=RJP79250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446335.1;locus_tag=C5O68_10150;product=EamA/RhaT family transporter;protein_id=RJP79250.1;transl_table=11 PTQV01000073.1 Genbank gene 7155 7844 . + . ID=gene-C5O68_10155;Name=C5O68_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10155 PTQV01000073.1 Protein Homology CDS 7155 7844 . + 0 ID=cds-RJP79251.1;Parent=gene-C5O68_10155;Dbxref=NCBI_GP:RJP79251.1;Name=RJP79251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446334.1;locus_tag=C5O68_10155;product=CTP--phosphocholine cytidylyltransferase;protein_id=RJP79251.1;transl_table=11 PTQV01000073.1 Genbank gene 7933 8781 . + . ID=gene-C5O68_10160;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=C5O68_10160 PTQV01000073.1 Protein Homology CDS 7933 8781 . + 0 ID=cds-RJP79252.1;Parent=gene-C5O68_10160;Dbxref=NCBI_GP:RJP79252.1;Name=RJP79252.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446333.1;locus_tag=C5O68_10160;product=DNA-protecting protein DprA;protein_id=RJP79252.1;transl_table=11 PTQV01000073.1 Genbank gene 9028 9207 . + . ID=gene-C5O68_10165;Name=C5O68_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10165 PTQV01000073.1 Protein Homology CDS 9028 9207 . + 0 ID=cds-RJP79253.1;Parent=gene-C5O68_10165;Dbxref=NCBI_GP:RJP79253.1;Name=RJP79253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001811819.1;locus_tag=C5O68_10165;product=hypothetical protein;protein_id=RJP79253.1;transl_table=11 PTQV01000073.1 Genbank gene 9554 10597 . + . ID=gene-C5O68_10170;Name=C5O68_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10170 PTQV01000073.1 Protein Homology CDS 9554 10597 . + 0 ID=cds-RJP79254.1;Parent=gene-C5O68_10170;Dbxref=NCBI_GP:RJP79254.1;Name=RJP79254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358735.1;locus_tag=C5O68_10170;product=TIGR00341 family protein;protein_id=RJP79254.1;transl_table=11 PTQV01000073.1 Genbank gene 10764 12851 . + . ID=gene-C5O68_10175;Name=C5O68_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10175 PTQV01000073.1 Protein Homology CDS 10764 12851 . + 0 ID=cds-RJP79255.1;Parent=gene-C5O68_10175;Dbxref=NCBI_GP:RJP79255.1;Name=RJP79255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446332.1;locus_tag=C5O68_10175;product=type I DNA topoisomerase;protein_id=RJP79255.1;transl_table=11 PTQV01000073.1 Genbank gene 13109 13468 . + . ID=gene-C5O68_10180;Name=C5O68_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10180 PTQV01000073.1 Protein Homology CDS 13109 13468 . + 0 ID=cds-RJP79256.1;Parent=gene-C5O68_10180;Dbxref=NCBI_GP:RJP79256.1;Name=RJP79256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358733.1;locus_tag=C5O68_10180;product=DUF454 domain-containing protein;protein_id=RJP79256.1;transl_table=11 ##sequence-region PTQV01000074.1 1 13144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000074.1 Genbank region 1 13144 . + . ID=PTQV01000074.1:1..13144;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000074.1 Genbank gene 1 116 . + . ID=gene-C5O68_10185;Name=C5O68_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10185;partial=true;start_range=.,1 PTQV01000074.1 Protein Homology CDS 1 116 . + 2 ID=cds-RJP79194.1;Parent=gene-C5O68_10185;Dbxref=NCBI_GP:RJP79194.1;Name=RJP79194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063513.1;locus_tag=C5O68_10185;partial=true;product=peptidase C1-like family protein;protein_id=RJP79194.1;start_range=.,1;transl_table=11 PTQV01000074.1 Genbank pseudogene 115 186 . + . ID=gene-C5O68_10190;Name=C5O68_10190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10190;pseudo=true PTQV01000074.1 Protein Homology CDS 115 186 . + 0 ID=cds-C5O68_10190;Parent=gene-C5O68_10190;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446602.1;locus_tag=C5O68_10190;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 PTQV01000074.1 Genbank gene 284 1885 . + . ID=gene-C5O68_10195;Name=C5O68_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10195 PTQV01000074.1 Protein Homology CDS 284 1885 . + 0 ID=cds-RJP79195.1;Parent=gene-C5O68_10195;Dbxref=NCBI_GP:RJP79195.1;Name=RJP79195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083785.1;locus_tag=C5O68_10195;product=type I restriction-modification system subunit M;protein_id=RJP79195.1;transl_table=11 PTQV01000074.1 Genbank gene 2080 3510 . + . ID=gene-C5O68_10200;Name=C5O68_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10200 PTQV01000074.1 Protein Homology CDS 2080 3510 . + 0 ID=cds-RJP79196.1;Parent=gene-C5O68_10200;Dbxref=NCBI_GP:RJP79196.1;Name=RJP79196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077062.1;locus_tag=C5O68_10200;product=ATP-dependent DNA helicase;protein_id=RJP79196.1;transl_table=11 PTQV01000074.1 Genbank gene 3726 3875 . - . ID=gene-C5O68_10205;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=C5O68_10205 PTQV01000074.1 Protein Homology CDS 3726 3875 . - 0 ID=cds-RJP79197.1;Parent=gene-C5O68_10205;Dbxref=NCBI_GP:RJP79197.1;Name=RJP79197.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=C5O68_10205;product=50S ribosomal protein L33;protein_id=RJP79197.1;transl_table=11 PTQV01000074.1 Genbank gene 3891 4073 . - . ID=gene-C5O68_10210;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=C5O68_10210 PTQV01000074.1 Protein Homology CDS 3891 4073 . - 0 ID=cds-RJP79198.1;Parent=gene-C5O68_10210;Dbxref=NCBI_GP:RJP79198.1;Name=RJP79198.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290417.1;locus_tag=C5O68_10210;product=50S ribosomal protein L32;protein_id=RJP79198.1;transl_table=11 PTQV01000074.1 Genbank gene 4225 4425 . - . ID=gene-C5O68_10215;Name=C5O68_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10215 PTQV01000074.1 Protein Homology CDS 4225 4425 . - 0 ID=cds-RJP79199.1;Parent=gene-C5O68_10215;Dbxref=NCBI_GP:RJP79199.1;Name=RJP79199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359533.1;locus_tag=C5O68_10215;product=PTS ascorbate transporter subunit IIC;protein_id=RJP79199.1;transl_table=11 PTQV01000074.1 Genbank gene 4759 6789 . + . ID=gene-C5O68_10220;Name=C5O68_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10220 PTQV01000074.1 Protein Homology CDS 4759 6789 . + 0 ID=cds-RJP79200.1;Parent=gene-C5O68_10220;Dbxref=NCBI_GP:RJP79200.1;Name=RJP79200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359531.1;locus_tag=C5O68_10220;product=transcription antiterminator BglG;protein_id=RJP79200.1;transl_table=11 PTQV01000074.1 Genbank gene 6793 7077 . + . ID=gene-C5O68_10225;Name=C5O68_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10225 PTQV01000074.1 Protein Homology CDS 6793 7077 . + 0 ID=cds-RJP79201.1;Parent=gene-C5O68_10225;Dbxref=NCBI_GP:RJP79201.1;Name=RJP79201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359530.1;locus_tag=C5O68_10225;product=PTS lactose transporter subunit IIB;protein_id=RJP79201.1;transl_table=11 PTQV01000074.1 Genbank gene 7090 8436 . + . ID=gene-C5O68_10230;Name=C5O68_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10230 PTQV01000074.1 Protein Homology CDS 7090 8436 . + 0 ID=cds-RJP79202.1;Parent=gene-C5O68_10230;Dbxref=NCBI_GP:RJP79202.1;Name=RJP79202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359529.1;locus_tag=C5O68_10230;product=PTS ascorbate transporter subunit IIC;protein_id=RJP79202.1;transl_table=11 PTQV01000074.1 Genbank gene 8440 9297 . + . ID=gene-C5O68_10235;Name=C5O68_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10235 PTQV01000074.1 Protein Homology CDS 8440 9297 . + 0 ID=cds-RJP79203.1;Parent=gene-C5O68_10235;Dbxref=NCBI_GP:RJP79203.1;Name=RJP79203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445282.1;locus_tag=C5O68_10235;product=transketolase;protein_id=RJP79203.1;transl_table=11 PTQV01000074.1 Genbank gene 9294 10226 . + . ID=gene-C5O68_10240;Name=C5O68_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10240 PTQV01000074.1 Protein Homology CDS 9294 10226 . + 0 ID=cds-RJP79204.1;Parent=gene-C5O68_10240;Dbxref=NCBI_GP:RJP79204.1;Name=RJP79204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445283.1;locus_tag=C5O68_10240;product=transketolase;protein_id=RJP79204.1;transl_table=11 PTQV01000074.1 Genbank gene 10459 12162 . + . ID=gene-C5O68_10245;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=C5O68_10245 PTQV01000074.1 Protein Homology CDS 10459 12162 . + 0 ID=cds-RJP79205.1;Parent=gene-C5O68_10245;Dbxref=NCBI_GP:RJP79205.1;Name=RJP79205.1;gbkey=CDS;gene=ilvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359526.1;locus_tag=C5O68_10245;product=dihydroxy-acid dehydratase;protein_id=RJP79205.1;transl_table=11 PTQV01000074.1 Genbank gene 12188 12532 . - . ID=gene-C5O68_10250;Name=C5O68_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10250 PTQV01000074.1 Protein Homology CDS 12188 12532 . - 0 ID=cds-RJP79206.1;Parent=gene-C5O68_10250;Dbxref=NCBI_GP:RJP79206.1;Name=RJP79206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809138.1;locus_tag=C5O68_10250;product=hypothetical protein;protein_id=RJP79206.1;transl_table=11 PTQV01000074.1 Genbank gene 12596 12937 . - . ID=gene-C5O68_10255;Name=C5O68_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10255 PTQV01000074.1 Protein Homology CDS 12596 12937 . - 0 ID=cds-RJP79207.1;Parent=gene-C5O68_10255;Dbxref=NCBI_GP:RJP79207.1;Name=RJP79207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359525.1;locus_tag=C5O68_10255;product=metal-sulfur cluster assembly factor;protein_id=RJP79207.1;transl_table=11 PTQV01000074.1 Genbank gene 12952 13086 . + . ID=gene-C5O68_10260;Name=C5O68_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10260 PTQV01000074.1 Protein Homology CDS 12952 13086 . + 0 ID=cds-RJP79208.1;Parent=gene-C5O68_10260;Dbxref=NCBI_GP:RJP79208.1;Name=RJP79208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445286.1;locus_tag=C5O68_10260;product=hypothetical protein;protein_id=RJP79208.1;transl_table=11 ##sequence-region PTQV01000075.1 1 11417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000075.1 Genbank region 1 11417 . + . ID=PTQV01000075.1:1..11417;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000075.1 Genbank gene 96 533 . - . ID=gene-C5O68_10265;Name=C5O68_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10265 PTQV01000075.1 Protein Homology CDS 96 533 . - 0 ID=cds-RJP79173.1;Parent=gene-C5O68_10265;Dbxref=NCBI_GP:RJP79173.1;Name=RJP79173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357627.1;locus_tag=C5O68_10265;product=CoA-binding protein;protein_id=RJP79173.1;transl_table=11 PTQV01000075.1 Genbank gene 617 3250 . - . ID=gene-C5O68_10270;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=C5O68_10270 PTQV01000075.1 Protein Homology CDS 617 3250 . - 0 ID=cds-RJP79177.1;Parent=gene-C5O68_10270;Dbxref=NCBI_GP:RJP79177.1;Name=RJP79177.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357626.1;locus_tag=C5O68_10270;product=DNA polymerase I;protein_id=RJP79177.1;transl_table=11 PTQV01000075.1 Genbank pseudogene 3535 3696 . - . ID=gene-C5O68_10275;Name=C5O68_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10275;pseudo=true PTQV01000075.1 Protein Homology CDS 3535 3696 . - 0 ID=cds-C5O68_10275;Parent=gene-C5O68_10275;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001844241.1;locus_tag=C5O68_10275;product=IS110 family transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 3704 3958 . + . ID=gene-C5O68_10280;Name=C5O68_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10280;pseudo=true PTQV01000075.1 Protein Homology CDS 3704 3958 . + 0 ID=cds-C5O68_10280;Parent=gene-C5O68_10280;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014295150.1;locus_tag=C5O68_10280;product=transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 4029 4187 . + . ID=gene-C5O68_10285;Name=C5O68_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10285;pseudo=true PTQV01000075.1 Protein Homology CDS 4029 4187 . + 0 ID=cds-C5O68_10285;Parent=gene-C5O68_10285;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=C5O68_10285;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000075.1 Genbank gene 4410 5252 . - . ID=gene-C5O68_10290;Name=C5O68_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10290 PTQV01000075.1 Protein Homology CDS 4410 5252 . - 0 ID=cds-RJP79174.1;Parent=gene-C5O68_10290;Dbxref=NCBI_GP:RJP79174.1;Name=RJP79174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757033.1;locus_tag=C5O68_10290;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=RJP79174.1;transl_table=11 PTQV01000075.1 Genbank pseudogene 5479 5731 . - . ID=gene-C5O68_10295;Name=C5O68_10295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10295;pseudo=true PTQV01000075.1 Protein Homology CDS 5479 5731 . - 0 ID=cds-C5O68_10295;Parent=gene-C5O68_10295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839193.1;locus_tag=C5O68_10295;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 5732 6533 . - . ID=gene-C5O68_10300;Name=C5O68_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10300;pseudo=true PTQV01000075.1 Protein Homology CDS 5732 6533 . - 0 ID=cds-C5O68_10300;Parent=gene-C5O68_10300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_10300;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 6573 6976 . - . ID=gene-C5O68_10305;Name=C5O68_10305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10305;pseudo=true PTQV01000075.1 Protein Homology CDS 6573 6976 . - 0 ID=cds-C5O68_10305;Parent=gene-C5O68_10305;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386827.1;locus_tag=C5O68_10305;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank gene 7267 7560 . - . ID=gene-C5O68_10310;Name=C5O68_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10310 PTQV01000075.1 Protein Homology CDS 7267 7560 . - 0 ID=cds-RJP79175.1;Parent=gene-C5O68_10310;Dbxref=NCBI_GP:RJP79175.1;Name=RJP79175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445203.1;locus_tag=C5O68_10310;product=hypothetical protein;protein_id=RJP79175.1;transl_table=11 PTQV01000075.1 Genbank pseudogene 7553 7669 . - . ID=gene-C5O68_10315;Name=C5O68_10315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10315;pseudo=true PTQV01000075.1 Protein Homology CDS 7553 7669 . - 0 ID=cds-C5O68_10315;Parent=gene-C5O68_10315;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233180.1;locus_tag=C5O68_10315;product=damage-inducible protein CinA;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 7873 8061 . + . ID=gene-C5O68_10320;Name=C5O68_10320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10320;pseudo=true PTQV01000075.1 Protein Homology CDS 7873 8061 . + 0 ID=cds-C5O68_10320;Parent=gene-C5O68_10320;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818994.1;locus_tag=C5O68_10320;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000075.1 Genbank pseudogene 8351 9198 . + . ID=gene-C5O68_10325;Name=C5O68_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10325;pseudo=true PTQV01000075.1 Protein Homology CDS 8351 9198 . + 0 ID=cds-C5O68_10325;Parent=gene-C5O68_10325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611222.1;locus_tag=C5O68_10325;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000075.1 Genbank gene 9255 10223 . - . ID=gene-C5O68_10330;Name=C5O68_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10330 PTQV01000075.1 Protein Homology CDS 9255 10223 . - 0 ID=cds-RJP79176.1;Parent=gene-C5O68_10330;Dbxref=NCBI_GP:RJP79176.1;Name=RJP79176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445201.1;locus_tag=C5O68_10330;product=ribose-phosphate diphosphokinase;protein_id=RJP79176.1;transl_table=11 PTQV01000075.1 Genbank gene 10368 10991 . - . ID=gene-C5O68_10335;Name=C5O68_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10335 PTQV01000075.1 Protein Homology CDS 10368 10991 . - 0 ID=cds-RJP79178.1;Parent=gene-C5O68_10335;Dbxref=NCBI_GP:RJP79178.1;Name=RJP79178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001841095.1;locus_tag=C5O68_10335;product=PrsW family intramembrane metalloprotease;protein_id=RJP79178.1;transl_table=11 PTQV01000075.1 Genbank gene 11267 11417 . + . ID=gene-C5O68_10340;Name=C5O68_10340;end_range=11417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10340;partial=true PTQV01000075.1 Protein Homology CDS 11267 11417 . + 0 ID=cds-RJP79179.1;Parent=gene-C5O68_10340;Dbxref=NCBI_GP:RJP79179.1;Name=RJP79179.1;end_range=11417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018373723.1;locus_tag=C5O68_10340;partial=true;product=IS200/IS605 family transposase;protein_id=RJP79179.1;transl_table=11 ##sequence-region PTQV01000076.1 1 38192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000076.1 Genbank region 1 38192 . + . ID=PTQV01000076.1:1..38192;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000076.1 Genbank gene 277 888 . + . ID=gene-C5O68_10345;Name=C5O68_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10345 PTQV01000076.1 Protein Homology CDS 277 888 . + 0 ID=cds-RJP78932.1;Parent=gene-C5O68_10345;Dbxref=NCBI_GP:RJP78932.1;Name=RJP78932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446330.1;locus_tag=C5O68_10345;product=copper homeostasis protein CutC;protein_id=RJP78932.1;transl_table=11 PTQV01000076.1 Genbank gene 931 1587 . + . ID=gene-C5O68_10350;Name=C5O68_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10350 PTQV01000076.1 Protein Homology CDS 931 1587 . + 0 ID=cds-RJP78933.1;Parent=gene-C5O68_10350;Dbxref=NCBI_GP:RJP78933.1;Name=RJP78933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358731.1;locus_tag=C5O68_10350;product=MmcQ family protein;protein_id=RJP78933.1;transl_table=11 PTQV01000076.1 Genbank gene 1891 3453 . + . ID=gene-C5O68_10355;Name=C5O68_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10355 PTQV01000076.1 Protein Homology CDS 1891 3453 . + 0 ID=cds-RJP78934.1;Parent=gene-C5O68_10355;Dbxref=NCBI_GP:RJP78934.1;Name=RJP78934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446328.1;locus_tag=C5O68_10355;product=2-isopropylmalate synthase;protein_id=RJP78934.1;transl_table=11 PTQV01000076.1 Genbank gene 3465 4502 . + . ID=gene-C5O68_10360;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=C5O68_10360 PTQV01000076.1 Protein Homology CDS 3465 4502 . + 0 ID=cds-RJP78935.1;Parent=gene-C5O68_10360;Dbxref=NCBI_GP:RJP78935.1;Name=RJP78935.1;gbkey=CDS;gene=leuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446327.1;locus_tag=C5O68_10360;product=3-isopropylmalate dehydrogenase;protein_id=RJP78935.1;transl_table=11 PTQV01000076.1 Genbank gene 4499 4768 . + . ID=gene-C5O68_10365;Name=C5O68_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10365 PTQV01000076.1 Protein Homology CDS 4499 4768 . + 0 ID=cds-RJP78936.1;Parent=gene-C5O68_10365;Dbxref=NCBI_GP:RJP78936.1;Name=RJP78936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358727.1;locus_tag=C5O68_10365;product=DUF1294 domain-containing protein;protein_id=RJP78936.1;transl_table=11 PTQV01000076.1 Genbank gene 4772 6154 . + . ID=gene-C5O68_10370;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=C5O68_10370 PTQV01000076.1 Protein Homology CDS 4772 6154 . + 0 ID=cds-RJP78937.1;Parent=gene-C5O68_10370;Dbxref=NCBI_GP:RJP78937.1;Name=RJP78937.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446325.1;locus_tag=C5O68_10370;product=3-isopropylmalate dehydratase large subunit;protein_id=RJP78937.1;transl_table=11 PTQV01000076.1 Genbank gene 6164 6757 . + . ID=gene-C5O68_10375;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=C5O68_10375 PTQV01000076.1 Protein Homology CDS 6164 6757 . + 0 ID=cds-RJP78938.1;Parent=gene-C5O68_10375;Dbxref=NCBI_GP:RJP78938.1;Name=RJP78938.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446324.1;locus_tag=C5O68_10375;product=3-isopropylmalate dehydratase small subunit;protein_id=RJP78938.1;transl_table=11 PTQV01000076.1 Genbank gene 6785 7564 . + . ID=gene-C5O68_10380;Name=C5O68_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10380 PTQV01000076.1 Protein Homology CDS 6785 7564 . + 0 ID=cds-RJP78939.1;Parent=gene-C5O68_10380;Dbxref=NCBI_GP:RJP78939.1;Name=RJP78939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002276310.1;locus_tag=C5O68_10380;product=translation factor (SUA5);protein_id=RJP78939.1;transl_table=11 PTQV01000076.1 Genbank gene 7738 9408 . + . ID=gene-C5O68_10385;Name=C5O68_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10385 PTQV01000076.1 Protein Homology CDS 7738 9408 . + 0 ID=cds-RJP78940.1;Parent=gene-C5O68_10385;Dbxref=NCBI_GP:RJP78940.1;Name=RJP78940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391559.1;locus_tag=C5O68_10385;product=endonuclease;protein_id=RJP78940.1;transl_table=11 PTQV01000076.1 Genbank gene 9368 10711 . + . ID=gene-C5O68_10390;Name=C5O68_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10390 PTQV01000076.1 Protein Homology CDS 9368 10711 . + 0 ID=cds-RJP78941.1;Parent=gene-C5O68_10390;Dbxref=NCBI_GP:RJP78941.1;Name=RJP78941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358722.1;locus_tag=C5O68_10390;product=3-isopropylmalate dehydrogenase;protein_id=RJP78941.1;transl_table=11 PTQV01000076.1 Genbank gene 10885 11871 . + . ID=gene-C5O68_10395;Name=C5O68_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10395 PTQV01000076.1 Protein Homology CDS 10885 11871 . + 0 ID=cds-RJP78942.1;Parent=gene-C5O68_10395;Dbxref=NCBI_GP:RJP78942.1;Name=RJP78942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358721.1;locus_tag=C5O68_10395;product=GMP reductase;protein_id=RJP78942.1;transl_table=11 PTQV01000076.1 Genbank gene 11938 12009 . + . ID=gene-C5O68_10400;Name=C5O68_10400;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_10400 PTQV01000076.1 tRNAscan-SE tRNA 11938 12009 . + . ID=rna-C5O68_10400;Parent=gene-C5O68_10400;anticodon=(pos:11971..11973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_10400;product=tRNA-Arg PTQV01000076.1 tRNAscan-SE exon 11938 12009 . + . ID=exon-C5O68_10400-1;Parent=rna-C5O68_10400;anticodon=(pos:11971..11973);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_10400;product=tRNA-Arg PTQV01000076.1 Genbank gene 12189 12887 . + . ID=gene-C5O68_10405;Name=C5O68_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10405 PTQV01000076.1 Protein Homology CDS 12189 12887 . + 0 ID=cds-RJP78943.1;Parent=gene-C5O68_10405;Dbxref=NCBI_GP:RJP78943.1;Name=RJP78943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358720.1;locus_tag=C5O68_10405;product=ribonuclease III;protein_id=RJP78943.1;transl_table=11 PTQV01000076.1 Genbank gene 12878 16417 . + . ID=gene-C5O68_10410;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=C5O68_10410 PTQV01000076.1 Protein Homology CDS 12878 16417 . + 0 ID=cds-RJP78944.1;Parent=gene-C5O68_10410;Dbxref=NCBI_GP:RJP78944.1;Name=RJP78944.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446320.1;locus_tag=C5O68_10410;product=chromosome segregation protein SMC;protein_id=RJP78944.1;transl_table=11 PTQV01000076.1 Genbank gene 16414 17208 . + . ID=gene-C5O68_10415;Name=C5O68_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10415 PTQV01000076.1 Protein Homology CDS 16414 17208 . + 0 ID=cds-RJP78945.1;Parent=gene-C5O68_10415;Dbxref=NCBI_GP:RJP78945.1;Name=RJP78945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358718.1;locus_tag=C5O68_10415;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP78945.1;transl_table=11 PTQV01000076.1 Genbank gene 17208 18026 . + . ID=gene-C5O68_10420;Name=C5O68_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10420 PTQV01000076.1 Protein Homology CDS 17208 18026 . + 0 ID=cds-RJP78946.1;Parent=gene-C5O68_10420;Dbxref=NCBI_GP:RJP78946.1;Name=RJP78946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358717.1;locus_tag=C5O68_10420;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP78946.1;transl_table=11 PTQV01000076.1 Genbank gene 18030 19319 . + . ID=gene-C5O68_10425;Name=C5O68_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10425 PTQV01000076.1 Protein Homology CDS 18030 19319 . + 0 ID=cds-RJP78947.1;Parent=gene-C5O68_10425;Dbxref=NCBI_GP:RJP78947.1;Name=RJP78947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446317.1;locus_tag=C5O68_10425;product=signal recognition particle-docking protein FtsY;protein_id=RJP78947.1;transl_table=11 PTQV01000076.1 Genbank gene 19365 20852 . - . ID=gene-C5O68_10430;Name=C5O68_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10430 PTQV01000076.1 Protein Homology CDS 19365 20852 . - 0 ID=cds-RJP78948.1;Parent=gene-C5O68_10430;Dbxref=NCBI_GP:RJP78948.1;Name=RJP78948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358715.1;locus_tag=C5O68_10430;product=glucose-6-phosphate dehydrogenase;protein_id=RJP78948.1;transl_table=11 PTQV01000076.1 Genbank gene 21003 21743 . - . ID=gene-C5O68_10435;Name=C5O68_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10435 PTQV01000076.1 Protein Homology CDS 21003 21743 . - 0 ID=cds-RJP78949.1;Parent=gene-C5O68_10435;Dbxref=NCBI_GP:RJP78949.1;Name=RJP78949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254183.1;locus_tag=C5O68_10435;product=peptide ABC transporter ATP-binding protein;protein_id=RJP78949.1;transl_table=11 PTQV01000076.1 Genbank gene 21743 23908 . - . ID=gene-C5O68_10440;Name=C5O68_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10440 PTQV01000076.1 Protein Homology CDS 21743 23908 . - 0 ID=cds-RJP78950.1;Parent=gene-C5O68_10440;Dbxref=NCBI_GP:RJP78950.1;Name=RJP78950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358713.1;locus_tag=C5O68_10440;product=amino acid ABC transporter permease;protein_id=RJP78950.1;transl_table=11 PTQV01000076.1 Genbank gene 24078 25031 . + . ID=gene-C5O68_10445;Name=C5O68_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10445 PTQV01000076.1 Protein Homology CDS 24078 25031 . + 0 ID=cds-RJP78951.1;Parent=gene-C5O68_10445;Dbxref=NCBI_GP:RJP78951.1;Name=RJP78951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446313.1;locus_tag=C5O68_10445;product=CPBP family intramembrane metalloprotease domain-containing protein;protein_id=RJP78951.1;transl_table=11 PTQV01000076.1 Genbank gene 25108 27096 . + . ID=gene-C5O68_10450;Name=C5O68_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10450 PTQV01000076.1 Protein Homology CDS 25108 27096 . + 0 ID=cds-RJP78952.1;Parent=gene-C5O68_10450;Dbxref=NCBI_GP:RJP78952.1;Name=RJP78952.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358711.1;locus_tag=C5O68_10450;product=excinuclease ABC subunit B;protein_id=RJP78952.1;transl_table=11 PTQV01000076.1 Genbank gene 27156 27668 . + . ID=gene-C5O68_10455;Name=C5O68_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10455 PTQV01000076.1 Protein Homology CDS 27156 27668 . + 0 ID=cds-RJP78966.1;Parent=gene-C5O68_10455;Dbxref=NCBI_GP:RJP78966.1;Name=RJP78966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829315.1;locus_tag=C5O68_10455;product=N-acetyltransferase;protein_id=RJP78966.1;transl_table=11 PTQV01000076.1 Genbank gene 27634 28122 . + . ID=gene-C5O68_10460;Name=C5O68_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10460 PTQV01000076.1 Protein Homology CDS 27634 28122 . + 0 ID=cds-RJP78953.1;Parent=gene-C5O68_10460;Dbxref=NCBI_GP:RJP78953.1;Name=RJP78953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358709.1;locus_tag=C5O68_10460;product=N-acetyltransferase;protein_id=RJP78953.1;transl_table=11 PTQV01000076.1 Genbank gene 28195 28662 . + . ID=gene-C5O68_10465;Name=C5O68_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10465 PTQV01000076.1 Protein Homology CDS 28195 28662 . + 0 ID=cds-RJP78954.1;Parent=gene-C5O68_10465;Dbxref=NCBI_GP:RJP78954.1;Name=RJP78954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446309.1;locus_tag=C5O68_10465;product=NUDIX hydrolase;protein_id=RJP78954.1;transl_table=11 PTQV01000076.1 Genbank pseudogene 28659 28727 . - . ID=gene-C5O68_10470;Name=C5O68_10470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10470;pseudo=true PTQV01000076.1 Protein Homology CDS 28659 28727 . - 0 ID=cds-C5O68_10470;Parent=gene-C5O68_10470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358707.1;locus_tag=C5O68_10470;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11 PTQV01000076.1 Genbank gene 28871 29845 . + . ID=gene-C5O68_10475;Name=C5O68_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10475 PTQV01000076.1 Protein Homology CDS 28871 29845 . + 0 ID=cds-RJP78955.1;Parent=gene-C5O68_10475;Dbxref=NCBI_GP:RJP78955.1;Name=RJP78955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207597.1;locus_tag=C5O68_10475;product=LacI family transcriptional regulator;protein_id=RJP78955.1;transl_table=11 PTQV01000076.1 Genbank gene 29845 30756 . + . ID=gene-C5O68_10480;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=C5O68_10480 PTQV01000076.1 Protein Homology CDS 29845 30756 . + 0 ID=cds-RJP78956.1;Parent=gene-C5O68_10480;Dbxref=NCBI_GP:RJP78956.1;Name=RJP78956.1;gbkey=CDS;gene=rbsK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739765.1;locus_tag=C5O68_10480;product=ribokinase;protein_id=RJP78956.1;transl_table=11 PTQV01000076.1 Genbank gene 30731 31129 . + . ID=gene-C5O68_10485;Name=C5O68_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10485 PTQV01000076.1 Protein Homology CDS 30731 31129 . + 0 ID=cds-RJP78957.1;Parent=gene-C5O68_10485;Dbxref=NCBI_GP:RJP78957.1;Name=RJP78957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003100993.1;locus_tag=C5O68_10485;product=D-ribose pyranase;protein_id=RJP78957.1;transl_table=11 PTQV01000076.1 Genbank gene 31143 32621 . + . ID=gene-C5O68_10490;Name=C5O68_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10490 PTQV01000076.1 Protein Homology CDS 31143 32621 . + 0 ID=cds-RJP78958.1;Parent=gene-C5O68_10490;Dbxref=NCBI_GP:RJP78958.1;Name=RJP78958.1;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_687152.1;locus_tag=C5O68_10490;product=D-xylose ABC transporter ATP-binding protein;protein_id=RJP78958.1;transl_table=11 PTQV01000076.1 Genbank gene 32623 33567 . + . ID=gene-C5O68_10495;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=C5O68_10495 PTQV01000076.1 Protein Homology CDS 32623 33567 . + 0 ID=cds-RJP78959.1;Parent=gene-C5O68_10495;Dbxref=NCBI_GP:RJP78959.1;Name=RJP78959.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006739551.1;locus_tag=C5O68_10495;product=ribose ABC transporter permease;protein_id=RJP78959.1;transl_table=11 PTQV01000076.1 Genbank gene 33671 34636 . + . ID=gene-C5O68_10500;Name=C5O68_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10500 PTQV01000076.1 Protein Homology CDS 33671 34636 . + 0 ID=cds-RJP78960.1;Parent=gene-C5O68_10500;Dbxref=NCBI_GP:RJP78960.1;Name=RJP78960.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_687150.1;locus_tag=C5O68_10500;product=D-ribose ABC transporter substrate-binding protein;protein_id=RJP78960.1;transl_table=11 PTQV01000076.1 Genbank gene 34717 34854 . + . ID=gene-C5O68_10505;Name=C5O68_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10505 PTQV01000076.1 Protein Homology CDS 34717 34854 . + 0 ID=cds-RJP78967.1;Parent=gene-C5O68_10505;Dbxref=NCBI_GP:RJP78967.1;Name=RJP78967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168176.1;locus_tag=C5O68_10505;product=DNA mismatch repair protein MutT;protein_id=RJP78967.1;transl_table=11 PTQV01000076.1 Genbank gene 34851 35366 . - . ID=gene-C5O68_10510;Name=C5O68_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10510 PTQV01000076.1 Protein Homology CDS 34851 35366 . - 0 ID=cds-RJP78961.1;Parent=gene-C5O68_10510;Dbxref=NCBI_GP:RJP78961.1;Name=RJP78961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358707.1;locus_tag=C5O68_10510;product=transcription repressor NadR;protein_id=RJP78961.1;transl_table=11 PTQV01000076.1 Genbank gene 35378 35905 . - . ID=gene-C5O68_10515;Name=C5O68_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10515 PTQV01000076.1 Protein Homology CDS 35378 35905 . - 0 ID=cds-RJP78962.1;Parent=gene-C5O68_10515;Dbxref=NCBI_GP:RJP78962.1;Name=RJP78962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446307.1;locus_tag=C5O68_10515;product=hypothetical protein;protein_id=RJP78962.1;transl_table=11 PTQV01000076.1 Genbank gene 36082 36645 . - . ID=gene-C5O68_10520;Name=C5O68_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10520 PTQV01000076.1 Protein Homology CDS 36082 36645 . - 0 ID=cds-RJP78963.1;Parent=gene-C5O68_10520;Dbxref=NCBI_GP:RJP78963.1;Name=RJP78963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446306.1;locus_tag=C5O68_10520;product=ECF transporter S component;protein_id=RJP78963.1;transl_table=11 PTQV01000076.1 Genbank gene 36629 37180 . - . ID=gene-C5O68_10525;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=C5O68_10525 PTQV01000076.1 Protein Homology CDS 36629 37180 . - 0 ID=cds-RJP78964.1;Parent=gene-C5O68_10525;Dbxref=NCBI_GP:RJP78964.1;Name=RJP78964.1;gbkey=CDS;gene=coaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358704.1;locus_tag=C5O68_10525;product=phosphopantothenoylcysteine decarboxylase;protein_id=RJP78964.1;transl_table=11 PTQV01000076.1 Genbank gene 37192 37881 . - . ID=gene-C5O68_10530;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=C5O68_10530 PTQV01000076.1 Protein Homology CDS 37192 37881 . - 0 ID=cds-RJP78965.1;Parent=gene-C5O68_10530;Dbxref=NCBI_GP:RJP78965.1;Name=RJP78965.1;gbkey=CDS;gene=coaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446304.1;locus_tag=C5O68_10530;product=phosphopantothenate--cysteine ligase;protein_id=RJP78965.1;transl_table=11 ##sequence-region PTQV01000077.1 1 14568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000077.1 Genbank region 1 14568 . + . ID=PTQV01000077.1:1..14568;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000077.1 Genbank pseudogene 1 136 . - . ID=gene-C5O68_10535;Name=C5O68_10535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10535;pseudo=true PTQV01000077.1 Protein Homology CDS 1 136 . - 0 ID=cds-C5O68_10535;Parent=gene-C5O68_10535;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284991.1;locus_tag=C5O68_10535;product=transposase;pseudo=true;transl_table=11 PTQV01000077.1 Genbank gene 431 1009 . + . ID=gene-C5O68_10540;Name=C5O68_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10540 PTQV01000077.1 Protein Homology CDS 431 1009 . + 0 ID=cds-RJP78899.1;Parent=gene-C5O68_10540;Dbxref=NCBI_GP:RJP78899.1;Name=RJP78899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405172.1;locus_tag=C5O68_10540;product=phosphate propanoyltransferase;protein_id=RJP78899.1;transl_table=11 PTQV01000077.1 Genbank gene 1029 1820 . + . ID=gene-C5O68_10545;Name=C5O68_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10545 PTQV01000077.1 Protein Homology CDS 1029 1820 . + 0 ID=cds-RJP78900.1;Parent=gene-C5O68_10545;Dbxref=NCBI_GP:RJP78900.1;Name=RJP78900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000599441.1;locus_tag=C5O68_10545;product=ABC transporter permease;protein_id=RJP78900.1;transl_table=11 PTQV01000077.1 Genbank gene 1917 2276 . + . ID=gene-C5O68_10550;Name=C5O68_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10550 PTQV01000077.1 Protein Homology CDS 1917 2276 . + 0 ID=cds-RJP78901.1;Parent=gene-C5O68_10550;Dbxref=NCBI_GP:RJP78901.1;Name=RJP78901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284889.1;locus_tag=C5O68_10550;product=hypothetical protein;protein_id=RJP78901.1;transl_table=11 PTQV01000077.1 Genbank gene 2817 3023 . + . ID=gene-C5O68_10555;Name=C5O68_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10555 PTQV01000077.1 Protein Homology CDS 2817 3023 . + 0 ID=cds-RJP78902.1;Parent=gene-C5O68_10555;Dbxref=NCBI_GP:RJP78902.1;Name=RJP78902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284887.1;locus_tag=C5O68_10555;product=hypothetical protein;protein_id=RJP78902.1;transl_table=11 PTQV01000077.1 Genbank pseudogene 3331 3570 . - . ID=gene-C5O68_10560;Name=C5O68_10560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10560;pseudo=true PTQV01000077.1 Protein Homology CDS 3331 3570 . - 0 ID=cds-C5O68_10560;Parent=gene-C5O68_10560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001815699.1;locus_tag=C5O68_10560;product=transposase;pseudo=true;transl_table=11 PTQV01000077.1 Genbank gene 3746 4621 . + . ID=gene-C5O68_10565;Name=C5O68_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10565 PTQV01000077.1 Protein Homology CDS 3746 4621 . + 0 ID=cds-RJP78903.1;Parent=gene-C5O68_10565;Dbxref=NCBI_GP:RJP78903.1;Name=RJP78903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446491.1;locus_tag=C5O68_10565;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=RJP78903.1;transl_table=11 PTQV01000077.1 Genbank gene 4622 5203 . + . ID=gene-C5O68_10570;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=C5O68_10570 PTQV01000077.1 Protein Homology CDS 4622 5203 . + 0 ID=cds-RJP78904.1;Parent=gene-C5O68_10570;Dbxref=NCBI_GP:RJP78904.1;Name=RJP78904.1;gbkey=CDS;gene=pdxT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000689942.1;locus_tag=C5O68_10570;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=RJP78904.1;transl_table=11 PTQV01000077.1 Genbank gene 5443 6090 . - . ID=gene-C5O68_10575;Name=C5O68_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10575 PTQV01000077.1 Protein Homology CDS 5443 6090 . - 0 ID=cds-RJP78905.1;Parent=gene-C5O68_10575;Dbxref=NCBI_GP:RJP78905.1;Name=RJP78905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358913.1;locus_tag=C5O68_10575;product=hemolysin III;protein_id=RJP78905.1;transl_table=11 PTQV01000077.1 Genbank gene 6090 6533 . - . ID=gene-C5O68_10580;Name=C5O68_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10580 PTQV01000077.1 Protein Homology CDS 6090 6533 . - 0 ID=cds-RJP78906.1;Parent=gene-C5O68_10580;Dbxref=NCBI_GP:RJP78906.1;Name=RJP78906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858731.1;locus_tag=C5O68_10580;product=DUF1836 domain-containing protein;protein_id=RJP78906.1;transl_table=11 PTQV01000077.1 Genbank gene 6668 7162 . + . ID=gene-C5O68_10585;Name=C5O68_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10585 PTQV01000077.1 Protein Homology CDS 6668 7162 . + 0 ID=cds-RJP78907.1;Parent=gene-C5O68_10585;Dbxref=NCBI_GP:RJP78907.1;Name=RJP78907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446487.1;locus_tag=C5O68_10585;product=N-acetyltransferase;protein_id=RJP78907.1;transl_table=11 PTQV01000077.1 Genbank gene 7162 7680 . + . ID=gene-C5O68_10590;Name=C5O68_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10590 PTQV01000077.1 Protein Homology CDS 7162 7680 . + 0 ID=cds-RJP78908.1;Parent=gene-C5O68_10590;Dbxref=NCBI_GP:RJP78908.1;Name=RJP78908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358910.1;locus_tag=C5O68_10590;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=RJP78908.1;transl_table=11 PTQV01000077.1 Genbank gene 7686 8042 . + . ID=gene-C5O68_10595;Name=C5O68_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10595 PTQV01000077.1 Protein Homology CDS 7686 8042 . + 0 ID=cds-RJP78909.1;Parent=gene-C5O68_10595;Dbxref=NCBI_GP:RJP78909.1;Name=RJP78909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358909.1;locus_tag=C5O68_10595;product=arsenate reductase family protein;protein_id=RJP78909.1;transl_table=11 PTQV01000077.1 Genbank gene 8200 9000 . + . ID=gene-C5O68_10600;Name=C5O68_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10600 PTQV01000077.1 Protein Homology CDS 8200 9000 . + 0 ID=cds-RJP78910.1;Parent=gene-C5O68_10600;Dbxref=NCBI_GP:RJP78910.1;Name=RJP78910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358908.1;locus_tag=C5O68_10600;product=amino acid ABC transporter permease;protein_id=RJP78910.1;transl_table=11 PTQV01000077.1 Genbank gene 9000 9743 . + . ID=gene-C5O68_10605;Name=C5O68_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10605 PTQV01000077.1 Protein Homology CDS 9000 9743 . + 0 ID=cds-RJP78911.1;Parent=gene-C5O68_10605;Dbxref=NCBI_GP:RJP78911.1;Name=RJP78911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446483.1;locus_tag=C5O68_10605;product=amino acid ABC transporter ATP-binding protein;protein_id=RJP78911.1;transl_table=11 PTQV01000077.1 Genbank gene 9809 10045 . + . ID=gene-C5O68_10610;Name=C5O68_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10610 PTQV01000077.1 Protein Homology CDS 9809 10045 . + 0 ID=cds-RJP78912.1;Parent=gene-C5O68_10610;Dbxref=NCBI_GP:RJP78912.1;Name=RJP78912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358906.1;locus_tag=C5O68_10610;product=DUF4059 domain-containing protein;protein_id=RJP78912.1;transl_table=11 PTQV01000077.1 Genbank gene 10111 11022 . + . ID=gene-C5O68_10615;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=C5O68_10615 PTQV01000077.1 Protein Homology CDS 10111 11022 . + 0 ID=cds-RJP78913.1;Parent=gene-C5O68_10615;Dbxref=NCBI_GP:RJP78913.1;Name=RJP78913.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358905.1;locus_tag=C5O68_10615;product=thioredoxin-disulfide reductase;protein_id=RJP78913.1;transl_table=11 PTQV01000077.1 Genbank gene 11061 11789 . - . ID=gene-C5O68_10620;Name=C5O68_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10620 PTQV01000077.1 Protein Homology CDS 11061 11789 . - 0 ID=cds-RJP78914.1;Parent=gene-C5O68_10620;Dbxref=NCBI_GP:RJP78914.1;Name=RJP78914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446480.1;locus_tag=C5O68_10620;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=RJP78914.1;transl_table=11 PTQV01000077.1 Genbank gene 11834 12445 . - . ID=gene-C5O68_10625;Name=C5O68_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10625 PTQV01000077.1 Protein Homology CDS 11834 12445 . - 0 ID=cds-RJP78915.1;Parent=gene-C5O68_10625;Dbxref=NCBI_GP:RJP78915.1;Name=RJP78915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446479.1;locus_tag=C5O68_10625;product=peptide deformylase;protein_id=RJP78915.1;transl_table=11 PTQV01000077.1 Genbank gene 12620 13939 . + . ID=gene-C5O68_10630;Name=C5O68_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10630 PTQV01000077.1 Protein Homology CDS 12620 13939 . + 0 ID=cds-RJP78916.1;Parent=gene-C5O68_10630;Dbxref=NCBI_GP:RJP78916.1;Name=RJP78916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446478.1;locus_tag=C5O68_10630;product=metallophosphatase;protein_id=RJP78916.1;transl_table=11 PTQV01000077.1 Genbank pseudogene 13945 14007 . - . ID=gene-C5O68_10635;Name=C5O68_10635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10635;pseudo=true PTQV01000077.1 Protein Homology CDS 13945 14007 . - 0 ID=cds-C5O68_10635;Parent=gene-C5O68_10635;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493529.1;locus_tag=C5O68_10635;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11 PTQV01000077.1 Genbank pseudogene 13984 14568 . + . ID=gene-C5O68_10640;Name=C5O68_10640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10640;pseudo=true PTQV01000077.1 Protein Homology CDS 13984 14568 . + 0 ID=cds-C5O68_10640;Parent=gene-C5O68_10640;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_10640;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000078.1 1 7396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000078.1 Genbank region 1 7396 . + . ID=PTQV01000078.1:1..7396;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000078.1 Genbank gene 1 245 . - . ID=gene-C5O68_10645;Name=C5O68_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10645;partial=true;start_range=.,1 PTQV01000078.1 Protein Homology CDS 1 245 . - 0 ID=cds-RJP78881.1;Parent=gene-C5O68_10645;Dbxref=NCBI_GP:RJP78881.1;Name=RJP78881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_10645;partial=true;product=IS630 family transposase;protein_id=RJP78881.1;start_range=.,1;transl_table=11 PTQV01000078.1 Genbank gene 721 1173 . - . ID=gene-C5O68_10650;Name=C5O68_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10650 PTQV01000078.1 Protein Homology CDS 721 1173 . - 0 ID=cds-RJP78882.1;Parent=gene-C5O68_10650;Dbxref=NCBI_GP:RJP78882.1;Name=RJP78882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446356.1;locus_tag=C5O68_10650;product=hypothetical protein;protein_id=RJP78882.1;transl_table=11 PTQV01000078.1 Genbank gene 1187 4264 . - . ID=gene-C5O68_10655;Name=C5O68_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10655 PTQV01000078.1 Protein Homology CDS 1187 4264 . - 0 ID=cds-RJP78883.1;Parent=gene-C5O68_10655;Dbxref=NCBI_GP:RJP78883.1;Name=RJP78883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446357.1;locus_tag=C5O68_10655;product=DEAD/DEAH box helicase;protein_id=RJP78883.1;transl_table=11 PTQV01000078.1 Genbank gene 4403 4903 . - . ID=gene-C5O68_10660;Name=C5O68_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10660 PTQV01000078.1 Protein Homology CDS 4403 4903 . - 0 ID=cds-RJP78884.1;Parent=gene-C5O68_10660;Dbxref=NCBI_GP:RJP78884.1;Name=RJP78884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013175773.1;locus_tag=C5O68_10660;product=hypothetical protein;protein_id=RJP78884.1;transl_table=11 PTQV01000078.1 Genbank gene 4915 5307 . - . ID=gene-C5O68_10665;Name=C5O68_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10665 PTQV01000078.1 GeneMarkS+ CDS 4915 5307 . - 0 ID=cds-RJP78885.1;Parent=gene-C5O68_10665;Dbxref=NCBI_GP:RJP78885.1;Name=RJP78885.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_10665;product=hypothetical protein;protein_id=RJP78885.1;transl_table=11 PTQV01000078.1 Genbank gene 5311 7089 . - . ID=gene-C5O68_10670;Name=C5O68_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10670 PTQV01000078.1 Protein Homology CDS 5311 7089 . - 0 ID=cds-RJP78886.1;Parent=gene-C5O68_10670;Dbxref=NCBI_GP:RJP78886.1;Name=RJP78886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000349002.1;locus_tag=C5O68_10670;product=site-specific DNA-methyltransferase;protein_id=RJP78886.1;transl_table=11 PTQV01000078.1 Genbank pseudogene 7243 7383 . - . ID=gene-C5O68_10675;Name=C5O68_10675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10675;pseudo=true PTQV01000078.1 Protein Homology CDS 7243 7383 . - 0 ID=cds-C5O68_10675;Parent=gene-C5O68_10675;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248054.1;locus_tag=C5O68_10675;product=methyltransferase;pseudo=true;transl_table=11 ##sequence-region PTQV01000079.1 1 13335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000079.1 Genbank region 1 13335 . + . ID=PTQV01000079.1:1..13335;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000079.1 Genbank gene 1 74 . - . ID=gene-C5O68_10680;Name=C5O68_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10680;partial=true;start_range=.,1 PTQV01000079.1 Protein Homology CDS 1 74 . - 0 ID=cds-RJP78849.1;Parent=gene-C5O68_10680;Dbxref=NCBI_GP:RJP78849.1;Name=RJP78849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001842220.1;locus_tag=C5O68_10680;partial=true;product=chlorohydrolase;protein_id=RJP78849.1;start_range=.,1;transl_table=11 PTQV01000079.1 Genbank gene 133 303 . - . ID=gene-C5O68_10685;Name=C5O68_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10685 PTQV01000079.1 Protein Homology CDS 133 303 . - 0 ID=cds-RJP78834.1;Parent=gene-C5O68_10685;Dbxref=NCBI_GP:RJP78834.1;Name=RJP78834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358180.1;locus_tag=C5O68_10685;product=DUF3042 domain-containing protein;protein_id=RJP78834.1;transl_table=11 PTQV01000079.1 Genbank gene 424 1308 . + . ID=gene-C5O68_10690;Name=C5O68_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10690 PTQV01000079.1 Protein Homology CDS 424 1308 . + 0 ID=cds-RJP78835.1;Parent=gene-C5O68_10690;Dbxref=NCBI_GP:RJP78835.1;Name=RJP78835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446577.1;locus_tag=C5O68_10690;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=RJP78835.1;transl_table=11 PTQV01000079.1 Genbank gene 1301 2539 . + . ID=gene-C5O68_10695;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=C5O68_10695 PTQV01000079.1 Protein Homology CDS 1301 2539 . + 0 ID=cds-RJP78836.1;Parent=gene-C5O68_10695;Dbxref=NCBI_GP:RJP78836.1;Name=RJP78836.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446576.1;locus_tag=C5O68_10695;product=GTPase HflX;protein_id=RJP78836.1;transl_table=11 PTQV01000079.1 Genbank gene 2532 3155 . + . ID=gene-C5O68_10700;Name=C5O68_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10700 PTQV01000079.1 Protein Homology CDS 2532 3155 . + 0 ID=cds-RJP78837.1;Parent=gene-C5O68_10700;Dbxref=NCBI_GP:RJP78837.1;Name=RJP78837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446575.1;locus_tag=C5O68_10700;product=cystathionine beta-lyase;protein_id=RJP78837.1;transl_table=11 PTQV01000079.1 Genbank gene 3170 4099 . + . ID=gene-C5O68_10705;Name=C5O68_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10705 PTQV01000079.1 Protein Homology CDS 3170 4099 . + 0 ID=cds-RJP78838.1;Parent=gene-C5O68_10705;Dbxref=NCBI_GP:RJP78838.1;Name=RJP78838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358185.1;locus_tag=C5O68_10705;product=ribonuclease Z;protein_id=RJP78838.1;transl_table=11 PTQV01000079.1 Genbank gene 4120 4875 . + . ID=gene-C5O68_10710;Name=C5O68_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10710 PTQV01000079.1 Protein Homology CDS 4120 4875 . + 0 ID=cds-RJP78839.1;Parent=gene-C5O68_10710;Dbxref=NCBI_GP:RJP78839.1;Name=RJP78839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446573.1;locus_tag=C5O68_10710;product=short-chain dehydrogenase;protein_id=RJP78839.1;transl_table=11 PTQV01000079.1 Genbank gene 4929 5837 . - . ID=gene-C5O68_10715;Name=C5O68_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10715 PTQV01000079.1 Protein Homology CDS 4929 5837 . - 0 ID=cds-RJP78840.1;Parent=gene-C5O68_10715;Dbxref=NCBI_GP:RJP78840.1;Name=RJP78840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446563.1;locus_tag=C5O68_10715;product=LysR family transcriptional regulator;protein_id=RJP78840.1;transl_table=11 PTQV01000079.1 Genbank gene 5949 6170 . + . ID=gene-C5O68_10720;Name=C5O68_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10720 PTQV01000079.1 Protein Homology CDS 5949 6170 . + 0 ID=cds-RJP78850.1;Parent=gene-C5O68_10720;Dbxref=NCBI_GP:RJP78850.1;Name=RJP78850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446558.1;locus_tag=C5O68_10720;product=DUF910 domain-containing protein;protein_id=RJP78850.1;transl_table=11 PTQV01000079.1 Genbank gene 6170 6550 . + . ID=gene-C5O68_10725;Name=C5O68_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10725 PTQV01000079.1 Protein Homology CDS 6170 6550 . + 0 ID=cds-RJP78841.1;Parent=gene-C5O68_10725;Dbxref=NCBI_GP:RJP78841.1;Name=RJP78841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358189.1;locus_tag=C5O68_10725;product=rhodanese-like domain-containing protein;protein_id=RJP78841.1;transl_table=11 PTQV01000079.1 Genbank gene 6622 6849 . + . ID=gene-C5O68_10730;Name=C5O68_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10730 PTQV01000079.1 Protein Homology CDS 6622 6849 . + 0 ID=cds-RJP78842.1;Parent=gene-C5O68_10730;Dbxref=NCBI_GP:RJP78842.1;Name=RJP78842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660075.1;locus_tag=C5O68_10730;product=hypothetical protein;protein_id=RJP78842.1;transl_table=11 PTQV01000079.1 Genbank gene 6889 7614 . - . ID=gene-C5O68_10735;Name=C5O68_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10735 PTQV01000079.1 Protein Homology CDS 6889 7614 . - 0 ID=cds-RJP78843.1;Parent=gene-C5O68_10735;Dbxref=NCBI_GP:RJP78843.1;Name=RJP78843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446556.1;locus_tag=C5O68_10735;product=16S rRNA pseudouridine(516) synthase;protein_id=RJP78843.1;transl_table=11 PTQV01000079.1 Genbank gene 7776 9617 . + . ID=gene-C5O68_10740;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=C5O68_10740 PTQV01000079.1 Protein Homology CDS 7776 9617 . + 0 ID=cds-RJP78844.1;Parent=gene-C5O68_10740;Dbxref=NCBI_GP:RJP78844.1;Name=RJP78844.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446555.1;locus_tag=C5O68_10740;product=translational GTPase TypA;protein_id=RJP78844.1;transl_table=11 PTQV01000079.1 Genbank gene 9637 9891 . + . ID=gene-C5O68_10745;Name=C5O68_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10745 PTQV01000079.1 Protein Homology CDS 9637 9891 . + 0 ID=cds-RJP78845.1;Parent=gene-C5O68_10745;Dbxref=NCBI_GP:RJP78845.1;Name=RJP78845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358193.1;locus_tag=C5O68_10745;product=DUF3165 domain-containing protein;protein_id=RJP78845.1;transl_table=11 PTQV01000079.1 Genbank gene 10207 10554 . + . ID=gene-C5O68_10750;Name=C5O68_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10750 PTQV01000079.1 Protein Homology CDS 10207 10554 . + 0 ID=cds-RJP78846.1;Parent=gene-C5O68_10750;Dbxref=NCBI_GP:RJP78846.1;Name=RJP78846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358194.1;locus_tag=C5O68_10750;product=lactococcin 972 family bacteriocin;protein_id=RJP78846.1;transl_table=11 PTQV01000079.1 Genbank gene 10625 12646 . + . ID=gene-C5O68_10755;Name=C5O68_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10755 PTQV01000079.1 Protein Homology CDS 10625 12646 . + 0 ID=cds-RJP78847.1;Parent=gene-C5O68_10755;Dbxref=NCBI_GP:RJP78847.1;Name=RJP78847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358195.1;locus_tag=C5O68_10755;product=bacteriocin-associated integral membrane family protein;protein_id=RJP78847.1;transl_table=11 PTQV01000079.1 Genbank gene 12648 13289 . + . ID=gene-C5O68_10760;Name=C5O68_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10760 PTQV01000079.1 Protein Homology CDS 12648 13289 . + 0 ID=cds-RJP78848.1;Parent=gene-C5O68_10760;Dbxref=NCBI_GP:RJP78848.1;Name=RJP78848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358196.1;locus_tag=C5O68_10760;product=peptide ABC transporter ATP-binding protein;protein_id=RJP78848.1;transl_table=11 ##sequence-region PTQV01000007.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000007.1 Genbank region 1 821 . + . ID=PTQV01000007.1:1..821;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000007.1 Genbank pseudogene 71 270 . + . ID=gene-C5O68_01635;Name=C5O68_01635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_01635;pseudo=true PTQV01000007.1 Protein Homology CDS 71 270 . + 0 ID=cds-C5O68_01635;Parent=gene-C5O68_01635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808732.1;locus_tag=C5O68_01635;product=transposase;pseudo=true;transl_table=11 PTQV01000007.1 Genbank gene 257 775 . + . ID=gene-C5O68_01640;Name=C5O68_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01640 PTQV01000007.1 Protein Homology CDS 257 775 . + 0 ID=cds-RJP84036.1;Parent=gene-C5O68_01640;Dbxref=NCBI_GP:RJP84036.1;Name=RJP84036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_01640;product=hypothetical protein;protein_id=RJP84036.1;transl_table=11 ##sequence-region PTQV01000080.1 1 15074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000080.1 Genbank region 1 15074 . + . ID=PTQV01000080.1:1..15074;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000080.1 Genbank pseudogene 231 1474 . - . ID=gene-C5O68_10765;Name=C5O68_10765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10765;pseudo=true PTQV01000080.1 Protein Homology CDS 231 1474 . - 0 ID=cds-C5O68_10765;Parent=gene-C5O68_10765;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014017202.1;locus_tag=C5O68_10765;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000080.1 Genbank gene 1471 1824 . - . ID=gene-C5O68_10770;Name=C5O68_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10770 PTQV01000080.1 Protein Homology CDS 1471 1824 . - 0 ID=cds-RJP78689.1;Parent=gene-C5O68_10770;Dbxref=NCBI_GP:RJP78689.1;Name=RJP78689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258243.1;locus_tag=C5O68_10770;product=oligopeptide-binding protein AliB;protein_id=RJP78689.1;transl_table=11 PTQV01000080.1 Genbank gene 2020 3627 . - . ID=gene-C5O68_10775;Name=C5O68_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10775 PTQV01000080.1 Protein Homology CDS 2020 3627 . - 0 ID=cds-RJP78690.1;Parent=gene-C5O68_10775;Dbxref=NCBI_GP:RJP78690.1;Name=RJP78690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357904.1;locus_tag=C5O68_10775;product=glucohydrolase;protein_id=RJP78690.1;transl_table=11 PTQV01000080.1 Genbank pseudogene 3864 4634 . - . ID=gene-C5O68_10780;Name=C5O68_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10780;pseudo=true PTQV01000080.1 Protein Homology CDS 3864 4634 . - 0 ID=cds-C5O68_10780;Parent=gene-C5O68_10780;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001818123.1;locus_tag=C5O68_10780;product=IS110 family transposase;pseudo=true;transl_table=11 PTQV01000080.1 Genbank pseudogene 4729 5199 . - . ID=gene-C5O68_10785;Name=C5O68_10785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10785;pseudo=true PTQV01000080.1 Protein Homology CDS 4729 5199 . - 0 ID=cds-C5O68_10785;Parent=gene-C5O68_10785;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004614190.1;locus_tag=C5O68_10785;product=IS110 family transposase;pseudo=true;transl_table=11 PTQV01000080.1 Genbank gene 5499 6983 . + . ID=gene-C5O68_10790;Name=C5O68_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10790 PTQV01000080.1 Protein Homology CDS 5499 6983 . + 0 ID=cds-RJP78691.1;Parent=gene-C5O68_10790;Dbxref=NCBI_GP:RJP78691.1;Name=RJP78691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357903.1;locus_tag=C5O68_10790;product=hypothetical protein;protein_id=RJP78691.1;transl_table=11 PTQV01000080.1 Genbank gene 7078 7560 . + . ID=gene-C5O68_10795;Name=C5O68_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10795 PTQV01000080.1 Protein Homology CDS 7078 7560 . + 0 ID=cds-RJP78692.1;Parent=gene-C5O68_10795;Dbxref=NCBI_GP:RJP78692.1;Name=RJP78692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357902.1;locus_tag=C5O68_10795;product=S-ribosylhomocysteine lyase;protein_id=RJP78692.1;transl_table=11 PTQV01000080.1 Genbank gene 7621 9723 . - . ID=gene-C5O68_10800;Name=C5O68_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10800 PTQV01000080.1 Protein Homology CDS 7621 9723 . - 0 ID=cds-RJP78693.1;Parent=gene-C5O68_10800;Dbxref=NCBI_GP:RJP78693.1;Name=RJP78693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446864.1;locus_tag=C5O68_10800;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=RJP78693.1;transl_table=11 PTQV01000080.1 Genbank gene 10279 11259 . - . ID=gene-C5O68_10805;Name=C5O68_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10805 PTQV01000080.1 Protein Homology CDS 10279 11259 . - 0 ID=cds-RJP78694.1;Parent=gene-C5O68_10805;Dbxref=NCBI_GP:RJP78694.1;Name=RJP78694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357899.1;locus_tag=C5O68_10805;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=RJP78694.1;transl_table=11 PTQV01000080.1 Genbank gene 11261 13513 . - . ID=gene-C5O68_10810;Name=C5O68_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10810 PTQV01000080.1 Protein Homology CDS 11261 13513 . - 0 ID=cds-RJP78695.1;Parent=gene-C5O68_10810;Dbxref=NCBI_GP:RJP78695.1;Name=RJP78695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357898.1;locus_tag=C5O68_10810;product=penicillin-binding protein;protein_id=RJP78695.1;transl_table=11 PTQV01000080.1 Genbank gene 13517 13834 . - . ID=gene-C5O68_10815;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=C5O68_10815 PTQV01000080.1 Protein Homology CDS 13517 13834 . - 0 ID=cds-RJP78696.1;Parent=gene-C5O68_10815;Dbxref=NCBI_GP:RJP78696.1;Name=RJP78696.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357897.1;locus_tag=C5O68_10815;product=cell division protein FtsL;protein_id=RJP78696.1;transl_table=11 PTQV01000080.1 Genbank gene 13846 14796 . - . ID=gene-C5O68_10820;Name=C5O68_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10820 PTQV01000080.1 Protein Homology CDS 13846 14796 . - 0 ID=cds-RJP78697.1;Parent=gene-C5O68_10820;Dbxref=NCBI_GP:RJP78697.1;Name=RJP78697.1;Note=catalyzes the methylation of the N4 position of C1402 on the 16S rRNA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446868.1;locus_tag=C5O68_10820;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=RJP78697.1;transl_table=11 PTQV01000080.1 Genbank pseudogene 14847 15074 . - . ID=gene-C5O68_10825;Name=C5O68_10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10825;pseudo=true PTQV01000080.1 Protein Homology CDS 14847 15074 . - 0 ID=cds-C5O68_10825;Parent=gene-C5O68_10825;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=C5O68_10825;product=IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000081.1 1 683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000081.1 Genbank region 1 683 . + . ID=PTQV01000081.1:1..683;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000081.1 Genbank gene 1 383 . + . ID=gene-C5O68_10830;Name=C5O68_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10830;partial=true;start_range=.,1 PTQV01000081.1 Protein Homology CDS 1 383 . + 2 ID=cds-RJP78687.1;Parent=gene-C5O68_10830;Dbxref=NCBI_GP:RJP78687.1;Name=RJP78687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=C5O68_10830;partial=true;product=IS30 family transposase;protein_id=RJP78687.1;start_range=.,1;transl_table=11 PTQV01000081.1 Genbank gene 501 683 . + . ID=gene-C5O68_10835;Name=C5O68_10835;end_range=683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10835;partial=true PTQV01000081.1 Protein Homology CDS 501 683 . + 0 ID=cds-RJP78688.1;Parent=gene-C5O68_10835;Dbxref=NCBI_GP:RJP78688.1;Name=RJP78688.1;end_range=683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_10835;partial=true;product=transposase;protein_id=RJP78688.1;transl_table=11 ##sequence-region PTQV01000082.1 1 9653 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000082.1 Genbank region 1 9653 . + . ID=PTQV01000082.1:1..9653;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000082.1 Genbank gene 577 1020 . + . ID=gene-C5O68_10840;Name=C5O68_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10840 PTQV01000082.1 Protein Homology CDS 577 1020 . + 0 ID=cds-RJP78640.1;Parent=gene-C5O68_10840;Dbxref=NCBI_GP:RJP78640.1;Name=RJP78640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445632.1;locus_tag=C5O68_10840;product=MarR family transcriptional regulator;protein_id=RJP78640.1;transl_table=11 PTQV01000082.1 Genbank gene 1067 1246 . + . ID=gene-C5O68_10845;Name=C5O68_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10845 PTQV01000082.1 Protein Homology CDS 1067 1246 . + 0 ID=cds-RJP78641.1;Parent=gene-C5O68_10845;Dbxref=NCBI_GP:RJP78641.1;Name=RJP78641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009014341.1;locus_tag=C5O68_10845;product=polyketide cyclase;protein_id=RJP78641.1;transl_table=11 PTQV01000082.1 Genbank gene 1261 1989 . + . ID=gene-C5O68_10850;Name=C5O68_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10850 PTQV01000082.1 Protein Homology CDS 1261 1989 . + 0 ID=cds-RJP78642.1;Parent=gene-C5O68_10850;Dbxref=NCBI_GP:RJP78642.1;Name=RJP78642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359270.1;locus_tag=C5O68_10850;product=glycine/betaine ABC transporter ATP-binding protein;protein_id=RJP78642.1;transl_table=11 PTQV01000082.1 Genbank gene 1982 3502 . + . ID=gene-C5O68_10855;Name=C5O68_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10855 PTQV01000082.1 Protein Homology CDS 1982 3502 . + 0 ID=cds-RJP78643.1;Parent=gene-C5O68_10855;Dbxref=NCBI_GP:RJP78643.1;Name=RJP78643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445634.1;locus_tag=C5O68_10855;product=glycine/betaine ABC transporter permease;protein_id=RJP78643.1;transl_table=11 PTQV01000082.1 Genbank gene 3840 4193 . + . ID=gene-C5O68_10860;Name=C5O68_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10860 PTQV01000082.1 Protein Homology CDS 3840 4193 . + 0 ID=cds-RJP78644.1;Parent=gene-C5O68_10860;Dbxref=NCBI_GP:RJP78644.1;Name=RJP78644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359263.1;locus_tag=C5O68_10860;product=MerR family transcriptional regulator;protein_id=RJP78644.1;transl_table=11 PTQV01000082.1 Genbank gene 4194 5231 . + . ID=gene-C5O68_10865;Name=C5O68_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10865 PTQV01000082.1 Protein Homology CDS 4194 5231 . + 0 ID=cds-RJP78645.1;Parent=gene-C5O68_10865;Dbxref=NCBI_GP:RJP78645.1;Name=RJP78645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359262.1;locus_tag=C5O68_10865;product=Zn-dependent alcohol dehydrogenase;protein_id=RJP78645.1;transl_table=11 PTQV01000082.1 Genbank gene 5277 6284 . - . ID=gene-C5O68_10870;Name=C5O68_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10870 PTQV01000082.1 Protein Homology CDS 5277 6284 . - 0 ID=cds-RJP78646.1;Parent=gene-C5O68_10870;Dbxref=NCBI_GP:RJP78646.1;Name=RJP78646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359261.1;locus_tag=C5O68_10870;product=LacI family transcriptional regulator;protein_id=RJP78646.1;transl_table=11 PTQV01000082.1 Genbank gene 6448 7626 . + . ID=gene-C5O68_10875;Name=C5O68_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10875 PTQV01000082.1 Protein Homology CDS 6448 7626 . + 0 ID=cds-RJP78647.1;Parent=gene-C5O68_10875;Dbxref=NCBI_GP:RJP78647.1;Name=RJP78647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359260.1;locus_tag=C5O68_10875;product=galactokinase;protein_id=RJP78647.1;transl_table=11 PTQV01000082.1 Genbank gene 7645 9126 . + . ID=gene-C5O68_10880;Name=C5O68_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10880 PTQV01000082.1 Protein Homology CDS 7645 9126 . + 0 ID=cds-RJP78648.1;Parent=gene-C5O68_10880;Dbxref=NCBI_GP:RJP78648.1;Name=RJP78648.1;Note=catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445639.1;locus_tag=C5O68_10880;product=galactose-1-phosphate uridylyltransferase;protein_id=RJP78648.1;transl_table=11 PTQV01000082.1 Genbank pseudogene 9175 9462 . + . ID=gene-C5O68_10885;Name=C5O68_10885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10885;pseudo=true PTQV01000082.1 Protein Homology CDS 9175 9462 . + 0 ID=cds-C5O68_10885;Parent=gene-C5O68_10885;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012386881.1;locus_tag=C5O68_10885;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000082.1 Genbank pseudogene 9497 9653 . + . ID=gene-C5O68_10890;Name=C5O68_10890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10890;pseudo=true PTQV01000082.1 Protein Homology CDS 9497 9653 . + 0 ID=cds-C5O68_10890;Parent=gene-C5O68_10890;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_10890;product=transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000083.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000083.1 Genbank region 1 559 . + . ID=PTQV01000083.1:1..559;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000083.1 Genbank gene 1 174 . + . ID=gene-C5O68_10895;Name=C5O68_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10895;partial=true;start_range=.,1 PTQV01000083.1 Protein Homology CDS 1 174 . + 0 ID=cds-RJP78538.1;Parent=gene-C5O68_10895;Dbxref=NCBI_GP:RJP78538.1;Name=RJP78538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808732.1;locus_tag=C5O68_10895;partial=true;product=transposase;protein_id=RJP78538.1;start_range=.,1;transl_table=11 PTQV01000083.1 Genbank gene 161 439 . + . ID=gene-C5O68_10900;Name=C5O68_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10900 PTQV01000083.1 GeneMarkS+ CDS 161 439 . + 0 ID=cds-RJP78539.1;Parent=gene-C5O68_10900;Dbxref=NCBI_GP:RJP78539.1;Name=RJP78539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_10900;product=hypothetical protein;protein_id=RJP78539.1;transl_table=11 ##sequence-region PTQV01000084.1 1 25816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000084.1 Genbank region 1 25816 . + . ID=PTQV01000084.1:1..25816;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000084.1 Genbank gene 115 1041 . + . ID=gene-C5O68_10905;Name=C5O68_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10905 PTQV01000084.1 Protein Homology CDS 115 1041 . + 0 ID=cds-RJP78492.1;Parent=gene-C5O68_10905;Dbxref=NCBI_GP:RJP78492.1;Name=RJP78492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445959.1;locus_tag=C5O68_10905;product=aldo/keto reductase;protein_id=RJP78492.1;transl_table=11 PTQV01000084.1 Genbank gene 1141 1377 . + . ID=gene-C5O68_10910;Name=C5O68_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10910 PTQV01000084.1 Protein Homology CDS 1141 1377 . + 0 ID=cds-RJP78493.1;Parent=gene-C5O68_10910;Dbxref=NCBI_GP:RJP78493.1;Name=RJP78493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445960.1;locus_tag=C5O68_10910;product=DUF2829 domain-containing protein;protein_id=RJP78493.1;transl_table=11 PTQV01000084.1 Genbank gene 1370 2068 . + . ID=gene-C5O68_10915;Name=C5O68_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10915 PTQV01000084.1 Protein Homology CDS 1370 2068 . + 0 ID=cds-RJP78494.1;Parent=gene-C5O68_10915;Dbxref=NCBI_GP:RJP78494.1;Name=RJP78494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358295.1;locus_tag=C5O68_10915;product=3-oxoacyl-ACP reductase;protein_id=RJP78494.1;transl_table=11 PTQV01000084.1 Genbank gene 2078 2557 . + . ID=gene-C5O68_10920;Name=C5O68_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10920 PTQV01000084.1 Protein Homology CDS 2078 2557 . + 0 ID=cds-RJP78495.1;Parent=gene-C5O68_10920;Dbxref=NCBI_GP:RJP78495.1;Name=RJP78495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445962.1;locus_tag=C5O68_10920;product=NUDIX hydrolase;protein_id=RJP78495.1;transl_table=11 PTQV01000084.1 Genbank gene 2565 3293 . + . ID=gene-C5O68_10925;Name=C5O68_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10925 PTQV01000084.1 Protein Homology CDS 2565 3293 . + 0 ID=cds-RJP78496.1;Parent=gene-C5O68_10925;Dbxref=NCBI_GP:RJP78496.1;Name=RJP78496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358297.1;locus_tag=C5O68_10925;product=GNAT family N-acetyltransferase;protein_id=RJP78496.1;transl_table=11 PTQV01000084.1 Genbank gene 3329 4204 . + . ID=gene-C5O68_10930;Name=C5O68_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10930 PTQV01000084.1 Protein Homology CDS 3329 4204 . + 0 ID=cds-RJP78497.1;Parent=gene-C5O68_10930;Dbxref=NCBI_GP:RJP78497.1;Name=RJP78497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358298.1;locus_tag=C5O68_10930;product=PEP-utilizing enzyme%2C TIM barrel domain protein;protein_id=RJP78497.1;transl_table=11 PTQV01000084.1 Genbank gene 4179 4619 . + . ID=gene-C5O68_10935;Name=C5O68_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10935 PTQV01000084.1 Protein Homology CDS 4179 4619 . + 0 ID=cds-RJP78498.1;Parent=gene-C5O68_10935;Dbxref=NCBI_GP:RJP78498.1;Name=RJP78498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358299.1;locus_tag=C5O68_10935;product=ASCH domain-containing protein;protein_id=RJP78498.1;transl_table=11 PTQV01000084.1 Genbank gene 4742 7288 . + . ID=gene-C5O68_10940;Name=C5O68_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10940 PTQV01000084.1 Protein Homology CDS 4742 7288 . + 0 ID=cds-RJP78499.1;Parent=gene-C5O68_10940;Dbxref=NCBI_GP:RJP78499.1;Name=RJP78499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358300.1;locus_tag=C5O68_10940;product=aminopeptidase;protein_id=RJP78499.1;transl_table=11 PTQV01000084.1 Genbank gene 7397 8071 . + . ID=gene-C5O68_10945;Name=C5O68_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10945 PTQV01000084.1 Protein Homology CDS 7397 8071 . + 0 ID=cds-RJP78500.1;Parent=gene-C5O68_10945;Dbxref=NCBI_GP:RJP78500.1;Name=RJP78500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445967.1;locus_tag=C5O68_10945;product=DNA-binding response regulator;protein_id=RJP78500.1;transl_table=11 PTQV01000084.1 Genbank gene 8061 9395 . + . ID=gene-C5O68_10950;Name=C5O68_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10950 PTQV01000084.1 Protein Homology CDS 8061 9395 . + 0 ID=cds-RJP78501.1;Parent=gene-C5O68_10950;Dbxref=NCBI_GP:RJP78501.1;Name=RJP78501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358302.1;locus_tag=C5O68_10950;product=two-component sensor histidine kinase;protein_id=RJP78501.1;transl_table=11 PTQV01000084.1 Genbank gene 9429 9716 . - . ID=gene-C5O68_10955;Name=C5O68_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10955 PTQV01000084.1 Protein Homology CDS 9429 9716 . - 0 ID=cds-RJP78502.1;Parent=gene-C5O68_10955;Dbxref=NCBI_GP:RJP78502.1;Name=RJP78502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358303.1;locus_tag=C5O68_10955;product=DUF3270 domain-containing protein;protein_id=RJP78502.1;transl_table=11 PTQV01000084.1 Genbank pseudogene 9856 10785 . + . ID=gene-C5O68_10960;Name=C5O68_10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_10960;pseudo=true PTQV01000084.1 Protein Homology CDS 9856 10785 . + 0 ID=cds-C5O68_10960;Parent=gene-C5O68_10960;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445970.1;locus_tag=C5O68_10960;product=peptidase U32;pseudo=true;transl_table=11 PTQV01000084.1 Genbank gene 10985 13435 . + . ID=gene-C5O68_10965;Name=C5O68_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10965 PTQV01000084.1 Protein Homology CDS 10985 13435 . + 0 ID=cds-RJP78503.1;Parent=gene-C5O68_10965;Dbxref=NCBI_GP:RJP78503.1;Name=RJP78503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358305.1;locus_tag=C5O68_10965;product=bifunctional DnaQ family exonuclease/ATP-dependent helicase;protein_id=RJP78503.1;transl_table=11 PTQV01000084.1 Genbank gene 13472 14695 . + . ID=gene-C5O68_10970;Name=C5O68_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10970 PTQV01000084.1 Protein Homology CDS 13472 14695 . + 0 ID=cds-RJP78504.1;Parent=gene-C5O68_10970;Dbxref=NCBI_GP:RJP78504.1;Name=RJP78504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445972.1;locus_tag=C5O68_10970;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=RJP78504.1;transl_table=11 PTQV01000084.1 Genbank gene 14706 15260 . + . ID=gene-C5O68_10975;Name=C5O68_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10975 PTQV01000084.1 Protein Homology CDS 14706 15260 . + 0 ID=cds-RJP78505.1;Parent=gene-C5O68_10975;Dbxref=NCBI_GP:RJP78505.1;Name=RJP78505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445973.1;locus_tag=C5O68_10975;product=DJ-1 family protein;protein_id=RJP78505.1;transl_table=11 PTQV01000084.1 Genbank gene 15336 15908 . + . ID=gene-C5O68_10980;Name=C5O68_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10980 PTQV01000084.1 Protein Homology CDS 15336 15908 . + 0 ID=cds-RJP78506.1;Parent=gene-C5O68_10980;Dbxref=NCBI_GP:RJP78506.1;Name=RJP78506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358308.1;locus_tag=C5O68_10980;product=DNA gyrase subunit B;protein_id=RJP78506.1;transl_table=11 PTQV01000084.1 Genbank gene 15923 17869 . + . ID=gene-C5O68_10985;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=C5O68_10985 PTQV01000084.1 Protein Homology CDS 15923 17869 . + 0 ID=cds-RJP78507.1;Parent=gene-C5O68_10985;Dbxref=NCBI_GP:RJP78507.1;Name=RJP78507.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358309.1;locus_tag=C5O68_10985;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=RJP78507.1;transl_table=11 PTQV01000084.1 Genbank gene 17951 19678 . + . ID=gene-C5O68_10990;Name=C5O68_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10990 PTQV01000084.1 Protein Homology CDS 17951 19678 . + 0 ID=cds-RJP78508.1;Parent=gene-C5O68_10990;Dbxref=NCBI_GP:RJP78508.1;Name=RJP78508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445977.1;locus_tag=C5O68_10990;product=septation ring formation regulator EzrA;protein_id=RJP78508.1;transl_table=11 PTQV01000084.1 Genbank gene 19927 20079 . + . ID=gene-C5O68_10995;Name=C5O68_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_10995 PTQV01000084.1 Protein Homology CDS 19927 20079 . + 0 ID=cds-RJP78510.1;Parent=gene-C5O68_10995;Dbxref=NCBI_GP:RJP78510.1;Name=RJP78510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_357920.1;locus_tag=C5O68_10995;product=hypothetical protein;protein_id=RJP78510.1;transl_table=11 PTQV01000084.1 Genbank gene 20549 25342 . + . ID=gene-C5O68_11000;Name=C5O68_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11000 PTQV01000084.1 Protein Homology CDS 20549 25342 . + 0 ID=cds-RJP78509.1;Parent=gene-C5O68_11000;Dbxref=NCBI_GP:RJP78509.1;Name=RJP78509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446500.1;locus_tag=C5O68_11000;product=serine protease;protein_id=RJP78509.1;transl_table=11 PTQV01000084.1 Genbank gene 25552 25816 . + . ID=gene-C5O68_11005;Name=C5O68_11005;end_range=25816,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11005;partial=true PTQV01000084.1 Protein Homology CDS 25552 25816 . + 0 ID=cds-RJP78511.1;Parent=gene-C5O68_11005;Dbxref=NCBI_GP:RJP78511.1;Name=RJP78511.1;end_range=25816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_11005;partial=true;product=transposase;protein_id=RJP78511.1;transl_table=11 ##sequence-region PTQV01000085.1 1 1666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000085.1 Genbank region 1 1666 . + . ID=PTQV01000085.1:1..1666;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000085.1 Genbank gene 341 1441 . + . ID=gene-C5O68_11010;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=C5O68_11010 PTQV01000085.1 Protein Homology CDS 341 1441 . + 0 ID=cds-RJP78433.1;Parent=gene-C5O68_11010;Dbxref=NCBI_GP:RJP78433.1;Name=RJP78433.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446859.1;locus_tag=C5O68_11010;product=UDP-galactopyranose mutase;protein_id=RJP78433.1;transl_table=11 PTQV01000085.1 Genbank gene 1526 1666 . + . ID=gene-C5O68_11015;Name=C5O68_11015;end_range=1666,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11015;partial=true PTQV01000085.1 Protein Homology CDS 1526 1666 . + 0 ID=cds-RJP78434.1;Parent=gene-C5O68_11015;Dbxref=NCBI_GP:RJP78434.1;Name=RJP78434.1;end_range=1666,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_11015;partial=true;product=IS630 family transposase;protein_id=RJP78434.1;transl_table=11 ##sequence-region PTQV01000086.1 1 2300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000086.1 Genbank region 1 2300 . + . ID=PTQV01000086.1:1..2300;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000086.1 Genbank gene 328 1206 . + . ID=gene-C5O68_11020;Name=C5O68_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11020 PTQV01000086.1 Protein Homology CDS 328 1206 . + 0 ID=cds-RJP78368.1;Parent=gene-C5O68_11020;Dbxref=NCBI_GP:RJP78368.1;Name=RJP78368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445351.1;locus_tag=C5O68_11020;product=DUF975 domain-containing protein;protein_id=RJP78368.1;transl_table=11 PTQV01000086.1 Genbank gene 1324 1968 . - . ID=gene-C5O68_11025;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=C5O68_11025 PTQV01000086.1 Protein Homology CDS 1324 1968 . - 0 ID=cds-RJP78369.1;Parent=gene-C5O68_11025;Dbxref=NCBI_GP:RJP78369.1;Name=RJP78369.1;gbkey=CDS;gene=pcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445350.1;locus_tag=C5O68_11025;product=pyroglutamyl-peptidase I;protein_id=RJP78369.1;transl_table=11 ##sequence-region PTQV01000087.1 1 24340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000087.1 Genbank region 1 24340 . + . ID=PTQV01000087.1:1..24340;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000087.1 Genbank gene 467 3481 . - . ID=gene-C5O68_11030;Name=C5O68_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11030 PTQV01000087.1 Protein Homology CDS 467 3481 . - 0 ID=cds-RJP78297.1;Parent=gene-C5O68_11030;Dbxref=NCBI_GP:RJP78297.1;Name=RJP78297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397909.1;locus_tag=C5O68_11030;product=sialidase;protein_id=RJP78297.1;transl_table=11 PTQV01000087.1 Genbank gene 3718 3903 . - . ID=gene-C5O68_11035;Name=C5O68_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11035 PTQV01000087.1 Protein Homology CDS 3718 3903 . - 0 ID=cds-RJP78298.1;Parent=gene-C5O68_11035;Dbxref=NCBI_GP:RJP78298.1;Name=RJP78298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001820371.1;locus_tag=C5O68_11035;product=hypothetical protein;protein_id=RJP78298.1;transl_table=11 PTQV01000087.1 Genbank gene 4191 4418 . - . ID=gene-C5O68_11040;Name=C5O68_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11040 PTQV01000087.1 Protein Homology CDS 4191 4418 . - 0 ID=cds-RJP78276.1;Parent=gene-C5O68_11040;Dbxref=NCBI_GP:RJP78276.1;Name=RJP78276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359130.1;locus_tag=C5O68_11040;product=hypothetical protein;protein_id=RJP78276.1;transl_table=11 PTQV01000087.1 Genbank gene 5121 6101 . - . ID=gene-C5O68_11045;Name=C5O68_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11045 PTQV01000087.1 Protein Homology CDS 5121 6101 . - 0 ID=cds-RJP78277.1;Parent=gene-C5O68_11045;Dbxref=NCBI_GP:RJP78277.1;Name=RJP78277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359131.1;locus_tag=C5O68_11045;product=acetylxylan esterase;protein_id=RJP78277.1;transl_table=11 PTQV01000087.1 Genbank gene 6274 6381 . - . ID=gene-C5O68_11050;Name=C5O68_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11050 PTQV01000087.1 Protein Homology CDS 6274 6381 . - 0 ID=cds-RJP78278.1;Parent=gene-C5O68_11050;Dbxref=NCBI_GP:RJP78278.1;Name=RJP78278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001809715.1;locus_tag=C5O68_11050;product=alanine racemase;protein_id=RJP78278.1;transl_table=11 PTQV01000087.1 Genbank gene 6418 8433 . - . ID=gene-C5O68_11055;Name=C5O68_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11055 PTQV01000087.1 Protein Homology CDS 6418 8433 . - 0 ID=cds-RJP78279.1;Parent=gene-C5O68_11055;Dbxref=NCBI_GP:RJP78279.1;Name=RJP78279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359132.1;locus_tag=C5O68_11055;product=DNA helicase RecG;protein_id=RJP78279.1;transl_table=11 PTQV01000087.1 Genbank gene 8452 9555 . - . ID=gene-C5O68_11060;Name=C5O68_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11060 PTQV01000087.1 Protein Homology CDS 8452 9555 . - 0 ID=cds-RJP78280.1;Parent=gene-C5O68_11060;Dbxref=NCBI_GP:RJP78280.1;Name=RJP78280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445710.1;locus_tag=C5O68_11060;product=alanine racemase;protein_id=RJP78280.1;transl_table=11 PTQV01000087.1 Genbank gene 9545 9913 . - . ID=gene-C5O68_11065;Name=C5O68_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11065 PTQV01000087.1 Protein Homology CDS 9545 9913 . - 0 ID=cds-RJP78281.1;Parent=gene-C5O68_11065;Dbxref=NCBI_GP:RJP78281.1;Name=RJP78281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445709.1;locus_tag=C5O68_11065;product=holo-ACP synthase;protein_id=RJP78281.1;transl_table=11 PTQV01000087.1 Genbank gene 9952 10983 . - . ID=gene-C5O68_11070;Name=C5O68_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11070 PTQV01000087.1 Protein Homology CDS 9952 10983 . - 0 ID=cds-RJP78282.1;Parent=gene-C5O68_11070;Dbxref=NCBI_GP:RJP78282.1;Name=RJP78282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359135.1;locus_tag=C5O68_11070;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=RJP78282.1;transl_table=11 PTQV01000087.1 Genbank gene 10985 12016 . - . ID=gene-C5O68_11075;Name=C5O68_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11075 PTQV01000087.1 Protein Homology CDS 10985 12016 . - 0 ID=cds-RJP78283.1;Parent=gene-C5O68_11075;Dbxref=NCBI_GP:RJP78283.1;Name=RJP78283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359136.1;locus_tag=C5O68_11075;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=RJP78283.1;transl_table=11 PTQV01000087.1 Genbank gene 12097 14610 . - . ID=gene-C5O68_11080;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=C5O68_11080 PTQV01000087.1 Protein Homology CDS 12097 14610 . - 0 ID=cds-RJP78284.1;Parent=gene-C5O68_11080;Dbxref=NCBI_GP:RJP78284.1;Name=RJP78284.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359137.1;locus_tag=C5O68_11080;product=preprotein translocase subunit SecA;protein_id=RJP78284.1;transl_table=11 PTQV01000087.1 Genbank pseudogene 14756 15042 . - . ID=gene-C5O68_11085;Name=C5O68_11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11085;pseudo=true PTQV01000087.1 Protein Homology CDS 14756 15042 . - 0 ID=cds-C5O68_11085;Parent=gene-C5O68_11085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940701.1;locus_tag=C5O68_11085;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000087.1 Genbank gene 15053 15703 . - . ID=gene-C5O68_11090;Name=C5O68_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11090 PTQV01000087.1 Protein Homology CDS 15053 15703 . - 0 ID=cds-RJP78285.1;Parent=gene-C5O68_11090;Dbxref=NCBI_GP:RJP78285.1;Name=RJP78285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359139.1;locus_tag=C5O68_11090;product=ABC transporter ATP-binding protein;protein_id=RJP78285.1;transl_table=11 PTQV01000087.1 Genbank gene 15707 16384 . - . ID=gene-C5O68_11095;Name=C5O68_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11095 PTQV01000087.1 Protein Homology CDS 15707 16384 . - 0 ID=cds-RJP78286.1;Parent=gene-C5O68_11095;Dbxref=NCBI_GP:RJP78286.1;Name=RJP78286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359140.1;locus_tag=C5O68_11095;product=hypothetical protein;protein_id=RJP78286.1;transl_table=11 PTQV01000087.1 Genbank gene 16341 17132 . - . ID=gene-C5O68_11100;Name=C5O68_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11100 PTQV01000087.1 Protein Homology CDS 16341 17132 . - 0 ID=cds-RJP78287.1;Parent=gene-C5O68_11100;Dbxref=NCBI_GP:RJP78287.1;Name=RJP78287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359141.1;locus_tag=C5O68_11100;product=hypothetical protein;protein_id=RJP78287.1;transl_table=11 PTQV01000087.1 Genbank gene 17164 17499 . - . ID=gene-C5O68_11105;Name=C5O68_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11105 PTQV01000087.1 Protein Homology CDS 17164 17499 . - 0 ID=cds-RJP78288.1;Parent=gene-C5O68_11105;Dbxref=NCBI_GP:RJP78288.1;Name=RJP78288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445704.1;locus_tag=C5O68_11105;product=preprotein translocase subunit SecA;protein_id=RJP78288.1;transl_table=11 PTQV01000087.1 Genbank gene 17580 18890 . - . ID=gene-C5O68_11110;Name=C5O68_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11110 PTQV01000087.1 Protein Homology CDS 17580 18890 . - 0 ID=cds-RJP78289.1;Parent=gene-C5O68_11110;Dbxref=NCBI_GP:RJP78289.1;Name=RJP78289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=C5O68_11110;product=ribosome biogenesis GTPase Der;protein_id=RJP78289.1;transl_table=11 PTQV01000087.1 Genbank gene 18904 19617 . - . ID=gene-C5O68_11115;Name=C5O68_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11115 PTQV01000087.1 Protein Homology CDS 18904 19617 . - 0 ID=cds-RJP78290.1;Parent=gene-C5O68_11115;Dbxref=NCBI_GP:RJP78290.1;Name=RJP78290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359147.1;locus_tag=C5O68_11115;product=NADPH-dependent oxidoreductase;protein_id=RJP78290.1;transl_table=11 PTQV01000087.1 Genbank gene 19614 20510 . - . ID=gene-C5O68_11120;Name=C5O68_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11120 PTQV01000087.1 Protein Homology CDS 19614 20510 . - 0 ID=cds-RJP78291.1;Parent=gene-C5O68_11120;Dbxref=NCBI_GP:RJP78291.1;Name=RJP78291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445701.1;locus_tag=C5O68_11120;product=primosomal protein DnaI;protein_id=RJP78291.1;transl_table=11 PTQV01000087.1 Genbank gene 20511 21680 . - . ID=gene-C5O68_11125;Name=C5O68_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11125 PTQV01000087.1 Protein Homology CDS 20511 21680 . - 0 ID=cds-RJP78292.1;Parent=gene-C5O68_11125;Dbxref=NCBI_GP:RJP78292.1;Name=RJP78292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445700.1;locus_tag=C5O68_11125;product=DNA helicase;protein_id=RJP78292.1;transl_table=11 PTQV01000087.1 Genbank gene 21681 22154 . - . ID=gene-C5O68_11130;Name=C5O68_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11130 PTQV01000087.1 Protein Homology CDS 21681 22154 . - 0 ID=cds-RJP78293.1;Parent=gene-C5O68_11130;Dbxref=NCBI_GP:RJP78293.1;Name=RJP78293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359150.2;locus_tag=C5O68_11130;product=transcriptional regulator NrdR;protein_id=RJP78293.1;transl_table=11 PTQV01000087.1 Genbank gene 22294 22659 . + . ID=gene-C5O68_11135;Name=C5O68_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11135 PTQV01000087.1 Protein Homology CDS 22294 22659 . + 0 ID=cds-RJP78294.1;Parent=gene-C5O68_11135;Dbxref=NCBI_GP:RJP78294.1;Name=RJP78294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445698.1;locus_tag=C5O68_11135;product=GntR family transcriptional regulator;protein_id=RJP78294.1;transl_table=11 PTQV01000087.1 Genbank gene 22664 23359 . + . ID=gene-C5O68_11140;Name=C5O68_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11140 PTQV01000087.1 Protein Homology CDS 22664 23359 . + 0 ID=cds-RJP78295.1;Parent=gene-C5O68_11140;Dbxref=NCBI_GP:RJP78295.1;Name=RJP78295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445697.1;locus_tag=C5O68_11140;product=ABC transporter ATP-binding protein;protein_id=RJP78295.1;transl_table=11 PTQV01000087.1 Genbank gene 23295 24143 . + . ID=gene-C5O68_11145;Name=C5O68_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11145 PTQV01000087.1 Protein Homology CDS 23295 24143 . + 0 ID=cds-RJP78296.1;Parent=gene-C5O68_11145;Dbxref=NCBI_GP:RJP78296.1;Name=RJP78296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359153.1;locus_tag=C5O68_11145;product=hypothetical protein;protein_id=RJP78296.1;transl_table=11 ##sequence-region PTQV01000088.1 1 5658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000088.1 Genbank region 1 5658 . + . ID=PTQV01000088.1:1..5658;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000088.1 Genbank pseudogene 1 492 . - . ID=gene-C5O68_11150;Name=C5O68_11150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11150;pseudo=true PTQV01000088.1 Protein Homology CDS 1 492 . - 0 ID=cds-C5O68_11150;Parent=gene-C5O68_11150;Note=frameshifted%3B internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_11150;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000088.1 Genbank pseudogene 528 635 . + . ID=gene-C5O68_11155;Name=C5O68_11155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11155;pseudo=true PTQV01000088.1 Protein Homology CDS 528 635 . + 0 ID=cds-C5O68_11155;Parent=gene-C5O68_11155;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=C5O68_11155;product=site-specific recombinase;pseudo=true;transl_table=11 PTQV01000088.1 Genbank gene 842 1648 . - . ID=gene-C5O68_11160;Name=C5O68_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11160 PTQV01000088.1 Protein Homology CDS 842 1648 . - 0 ID=cds-RJP78256.1;Parent=gene-C5O68_11160;Dbxref=NCBI_GP:RJP78256.1;Name=RJP78256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358763.1;locus_tag=C5O68_11160;product=Cof-type HAD-IIB family hydrolase;protein_id=RJP78256.1;transl_table=11 PTQV01000088.1 Genbank gene 1661 2965 . - . ID=gene-C5O68_11165;Name=C5O68_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11165 PTQV01000088.1 Protein Homology CDS 1661 2965 . - 0 ID=cds-RJP78257.1;Parent=gene-C5O68_11165;Dbxref=NCBI_GP:RJP78257.1;Name=RJP78257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446365.1;locus_tag=C5O68_11165;product=HD domain-containing protein;protein_id=RJP78257.1;transl_table=11 PTQV01000088.1 Genbank gene 3037 3414 . + . ID=gene-C5O68_11170;Name=C5O68_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11170 PTQV01000088.1 Protein Homology CDS 3037 3414 . + 0 ID=cds-RJP78258.1;Parent=gene-C5O68_11170;Dbxref=NCBI_GP:RJP78258.1;Name=RJP78258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358761.1;locus_tag=C5O68_11170;product=DUF1934 domain-containing protein;protein_id=RJP78258.1;transl_table=11 PTQV01000088.1 Genbank gene 3515 3847 . + . ID=gene-C5O68_11175;Name=C5O68_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11175 PTQV01000088.1 Protein Homology CDS 3515 3847 . + 0 ID=cds-RJP78259.1;Parent=gene-C5O68_11175;Dbxref=NCBI_GP:RJP78259.1;Name=RJP78259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358760.1;locus_tag=C5O68_11175;product=putative DNA-binding protein;protein_id=RJP78259.1;transl_table=11 PTQV01000088.1 Genbank gene 3859 5430 . + . ID=gene-C5O68_11180;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=C5O68_11180 PTQV01000088.1 Protein Homology CDS 3859 5430 . + 0 ID=cds-RJP78260.1;Parent=gene-C5O68_11180;Dbxref=NCBI_GP:RJP78260.1;Name=RJP78260.1;gbkey=CDS;gene=ffh;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358759.1;locus_tag=C5O68_11180;product=signal recognition particle protein;protein_id=RJP78260.1;transl_table=11 ##sequence-region PTQV01000089.1 1 21215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000089.1 Genbank region 1 21215 . + . ID=PTQV01000089.1:1..21215;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000089.1 Genbank gene 1 470 . - . ID=gene-C5O68_11185;Name=C5O68_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11185;partial=true;start_range=.,1 PTQV01000089.1 Protein Homology CDS 1 470 . - 0 ID=cds-RJP78206.1;Parent=gene-C5O68_11185;Dbxref=NCBI_GP:RJP78206.1;Name=RJP78206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001808790.1;locus_tag=C5O68_11185;partial=true;product=IS1380 family transposase;protein_id=RJP78206.1;start_range=.,1;transl_table=11 PTQV01000089.1 Genbank gene 530 901 . + . ID=gene-C5O68_11190;Name=C5O68_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11190 PTQV01000089.1 Protein Homology CDS 530 901 . + 0 ID=cds-RJP78207.1;Parent=gene-C5O68_11190;Dbxref=NCBI_GP:RJP78207.1;Name=RJP78207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358799.1;locus_tag=C5O68_11190;product=hypothetical protein;protein_id=RJP78207.1;transl_table=11 PTQV01000089.1 Genbank gene 1302 2111 . + . ID=gene-C5O68_11195;Name=C5O68_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11195 PTQV01000089.1 Protein Homology CDS 1302 2111 . + 0 ID=cds-RJP78226.1;Parent=gene-C5O68_11195;Dbxref=NCBI_GP:RJP78226.1;Name=RJP78226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445907.1;locus_tag=C5O68_11195;product=RpiR family transcriptional regulator;protein_id=RJP78226.1;transl_table=11 PTQV01000089.1 Genbank gene 2116 2817 . + . ID=gene-C5O68_11200;Name=C5O68_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11200 PTQV01000089.1 Protein Homology CDS 2116 2817 . + 0 ID=cds-RJP78208.1;Parent=gene-C5O68_11200;Dbxref=NCBI_GP:RJP78208.1;Name=RJP78208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445908.1;locus_tag=C5O68_11200;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=RJP78208.1;transl_table=11 PTQV01000089.1 Genbank gene 2842 3759 . + . ID=gene-C5O68_11205;Name=C5O68_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11205 PTQV01000089.1 Protein Homology CDS 2842 3759 . + 0 ID=cds-RJP78209.1;Parent=gene-C5O68_11205;Dbxref=NCBI_GP:RJP78209.1;Name=RJP78209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445909.1;locus_tag=C5O68_11205;product=N-acetylneuraminate lyase;protein_id=RJP78209.1;transl_table=11 PTQV01000089.1 Genbank gene 3787 5328 . + . ID=gene-C5O68_11210;Name=C5O68_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11210 PTQV01000089.1 Protein Homology CDS 3787 5328 . + 0 ID=cds-RJP78210.1;Parent=gene-C5O68_11210;Dbxref=NCBI_GP:RJP78210.1;Name=RJP78210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445910.1;locus_tag=C5O68_11210;product=sodium:solute symporter;protein_id=RJP78210.1;transl_table=11 PTQV01000089.1 Genbank gene 5354 5812 . + . ID=gene-C5O68_11215;Name=C5O68_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11215 PTQV01000089.1 Protein Homology CDS 5354 5812 . + 0 ID=cds-RJP78211.1;Parent=gene-C5O68_11215;Dbxref=NCBI_GP:RJP78211.1;Name=RJP78211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445911.1;locus_tag=C5O68_11215;product=YhcH/YjgK/YiaL family protein;protein_id=RJP78211.1;transl_table=11 PTQV01000089.1 Genbank gene 5814 8036 . + . ID=gene-C5O68_11220;Name=C5O68_11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11220 PTQV01000089.1 Protein Homology CDS 5814 8036 . + 0 ID=cds-RJP78212.1;Parent=gene-C5O68_11220;Dbxref=NCBI_GP:RJP78212.1;Name=RJP78212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000739354.1;locus_tag=C5O68_11220;product=sialidase;protein_id=RJP78212.1;transl_table=11 PTQV01000089.1 Genbank gene 8076 9185 . + . ID=gene-C5O68_11225;Name=C5O68_11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11225 PTQV01000089.1 Protein Homology CDS 8076 9185 . + 0 ID=cds-RJP78213.1;Parent=gene-C5O68_11225;Dbxref=NCBI_GP:RJP78213.1;Name=RJP78213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445912.1;locus_tag=C5O68_11225;product=gfo/Idh/MocA family oxidoreductase;protein_id=RJP78213.1;transl_table=11 PTQV01000089.1 Genbank gene 9342 10232 . + . ID=gene-C5O68_11230;Name=C5O68_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11230 PTQV01000089.1 Protein Homology CDS 9342 10232 . + 0 ID=cds-RJP78214.1;Parent=gene-C5O68_11230;Dbxref=NCBI_GP:RJP78214.1;Name=RJP78214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445913.1;locus_tag=C5O68_11230;product=ROK family protein;protein_id=RJP78214.1;transl_table=11 PTQV01000089.1 Genbank gene 10257 10580 . + . ID=gene-C5O68_11235;Name=C5O68_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11235 PTQV01000089.1 Protein Homology CDS 10257 10580 . + 0 ID=cds-RJP78215.1;Parent=gene-C5O68_11235;Dbxref=NCBI_GP:RJP78215.1;Name=RJP78215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445914.1;locus_tag=C5O68_11235;product=hypothetical protein;protein_id=RJP78215.1;transl_table=11 PTQV01000089.1 Genbank gene 10570 12561 . + . ID=gene-C5O68_11240;Name=C5O68_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11240 PTQV01000089.1 Protein Homology CDS 10570 12561 . + 0 ID=cds-RJP78216.1;Parent=gene-C5O68_11240;Dbxref=NCBI_GP:RJP78216.1;Name=RJP78216.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445915.1;locus_tag=C5O68_11240;product=V-type ATP synthase subunit I;protein_id=RJP78216.1;transl_table=11 PTQV01000089.1 Genbank gene 12577 13053 . + . ID=gene-C5O68_11245;Name=C5O68_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11245 PTQV01000089.1 Protein Homology CDS 12577 13053 . + 0 ID=cds-RJP78217.1;Parent=gene-C5O68_11245;Dbxref=NCBI_GP:RJP78217.1;Name=RJP78217.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445916.1;locus_tag=C5O68_11245;product=V-type ATP synthase subunit K;protein_id=RJP78217.1;transl_table=11 PTQV01000089.1 Genbank gene 13087 13668 . + . ID=gene-C5O68_11250;Name=C5O68_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11250 PTQV01000089.1 Protein Homology CDS 13087 13668 . + 0 ID=cds-RJP78218.1;Parent=gene-C5O68_11250;Dbxref=NCBI_GP:RJP78218.1;Name=RJP78218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445917.1;locus_tag=C5O68_11250;product=hypothetical protein;protein_id=RJP78218.1;transl_table=11 PTQV01000089.1 Genbank gene 13733 14740 . + . ID=gene-C5O68_11255;Name=C5O68_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11255 PTQV01000089.1 Protein Homology CDS 13733 14740 . + 0 ID=cds-RJP78219.1;Parent=gene-C5O68_11255;Dbxref=NCBI_GP:RJP78219.1;Name=RJP78219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445918.1;locus_tag=C5O68_11255;product=V-type ATP synthase subunit C;protein_id=RJP78219.1;transl_table=11 PTQV01000089.1 Genbank gene 14730 15050 . + . ID=gene-C5O68_11260;Name=C5O68_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11260 PTQV01000089.1 Protein Homology CDS 14730 15050 . + 0 ID=cds-RJP78220.1;Parent=gene-C5O68_11260;Dbxref=NCBI_GP:RJP78220.1;Name=RJP78220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445919.1;locus_tag=C5O68_11260;product=V-type ATP synthase subunit F;protein_id=RJP78220.1;transl_table=11 PTQV01000089.1 Genbank gene 15113 16888 . + . ID=gene-C5O68_11265;Name=C5O68_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11265 PTQV01000089.1 Protein Homology CDS 15113 16888 . + 0 ID=cds-RJP78221.1;Parent=gene-C5O68_11265;Dbxref=NCBI_GP:RJP78221.1;Name=RJP78221.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the A subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445920.1;locus_tag=C5O68_11265;product=V-type ATP synthase alpha chain;protein_id=RJP78221.1;transl_table=11 PTQV01000089.1 Genbank gene 16889 18274 . + . ID=gene-C5O68_11270;Name=C5O68_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11270 PTQV01000089.1 Protein Homology CDS 16889 18274 . + 0 ID=cds-RJP78222.1;Parent=gene-C5O68_11270;Dbxref=NCBI_GP:RJP78222.1;Name=RJP78222.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445921.1;locus_tag=C5O68_11270;product=ATP synthase subunit beta;protein_id=RJP78222.1;transl_table=11 PTQV01000089.1 Genbank gene 18297 18908 . + . ID=gene-C5O68_11275;Name=C5O68_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11275 PTQV01000089.1 Protein Homology CDS 18297 18908 . + 0 ID=cds-RJP78223.1;Parent=gene-C5O68_11275;Dbxref=NCBI_GP:RJP78223.1;Name=RJP78223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445922.1;locus_tag=C5O68_11275;product=V-type ATP synthase subunit D;protein_id=RJP78223.1;transl_table=11 PTQV01000089.1 Genbank pseudogene 18986 19105 . + . ID=gene-C5O68_11280;Name=C5O68_11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11280;pseudo=true PTQV01000089.1 Protein Homology CDS 18986 19105 . + 0 ID=cds-C5O68_11280;Parent=gene-C5O68_11280;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218559.1;locus_tag=C5O68_11280;product=peptide ABC transporter ATPase;pseudo=true;transl_table=11 PTQV01000089.1 Genbank gene 19181 19366 . + . ID=gene-C5O68_11285;Name=C5O68_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11285 PTQV01000089.1 Protein Homology CDS 19181 19366 . + 0 ID=cds-RJP78227.1;Parent=gene-C5O68_11285;Dbxref=NCBI_GP:RJP78227.1;Name=RJP78227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=C5O68_11285;product=hypothetical protein;protein_id=RJP78227.1;transl_table=11 PTQV01000089.1 Genbank gene 19347 19670 . + . ID=gene-C5O68_11290;Name=C5O68_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11290 PTQV01000089.1 Protein Homology CDS 19347 19670 . + 0 ID=cds-RJP78224.1;Parent=gene-C5O68_11290;Dbxref=NCBI_GP:RJP78224.1;Name=RJP78224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586640.1;locus_tag=C5O68_11290;product=IS66 family insertion sequence hypothetical protein;protein_id=RJP78224.1;transl_table=11 PTQV01000089.1 Genbank pseudogene 19825 20135 . - . ID=gene-C5O68_11295;Name=C5O68_11295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11295;pseudo=true PTQV01000089.1 Protein Homology CDS 19825 20135 . - 0 ID=cds-C5O68_11295;Parent=gene-C5O68_11295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_11295;product=IS630 family transposase;pseudo=true;transl_table=11 PTQV01000089.1 Genbank gene 20126 20566 . + . ID=gene-C5O68_11300;Name=C5O68_11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11300 PTQV01000089.1 Protein Homology CDS 20126 20566 . + 0 ID=cds-RJP78225.1;Parent=gene-C5O68_11300;Dbxref=NCBI_GP:RJP78225.1;Name=RJP78225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646889.1;locus_tag=C5O68_11300;product=transposase;protein_id=RJP78225.1;transl_table=11 PTQV01000089.1 Genbank pseudogene 20642 21215 . + . ID=gene-C5O68_11305;Name=C5O68_11305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11305;pseudo=true PTQV01000089.1 Protein Homology CDS 20642 21215 . + 0 ID=cds-C5O68_11305;Parent=gene-C5O68_11305;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047224.1;locus_tag=C5O68_11305;product=transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000008.1 1 558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000008.1 Genbank region 1 558 . + . ID=PTQV01000008.1:1..558;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000008.1 Genbank gene 30 356 . + . ID=gene-C5O68_01645;Name=C5O68_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01645 PTQV01000008.1 Protein Homology CDS 30 356 . + 0 ID=cds-RJP84027.1;Parent=gene-C5O68_01645;Dbxref=NCBI_GP:RJP84027.1;Name=RJP84027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331855.1;locus_tag=C5O68_01645;product=transposase;protein_id=RJP84027.1;transl_table=11 PTQV01000008.1 Genbank gene 343 558 . + . ID=gene-C5O68_01650;Name=C5O68_01650;end_range=558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01650;partial=true PTQV01000008.1 GeneMarkS+ CDS 343 558 . + 0 ID=cds-RJP84026.1;Parent=gene-C5O68_01650;Dbxref=NCBI_GP:RJP84026.1;Name=RJP84026.1;end_range=558,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=C5O68_01650;partial=true;product=transposase;protein_id=RJP84026.1;transl_table=11 ##sequence-region PTQV01000090.1 1 13575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000090.1 Genbank region 1 13575 . + . ID=PTQV01000090.1:1..13575;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000090.1 Genbank gene 84 6785 . + . ID=gene-C5O68_11310;Name=C5O68_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11310 PTQV01000090.1 Protein Homology CDS 84 6785 . + 0 ID=cds-RJP78137.1;Parent=gene-C5O68_11310;Dbxref=NCBI_GP:RJP78137.1;Name=RJP78137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358159.1;locus_tag=C5O68_11310;product=beta-galactosidase;protein_id=RJP78137.1;transl_table=11 PTQV01000090.1 Genbank gene 7033 8031 . - . ID=gene-C5O68_11315;Name=C5O68_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11315 PTQV01000090.1 Protein Homology CDS 7033 8031 . - 0 ID=cds-RJP78138.1;Parent=gene-C5O68_11315;Dbxref=NCBI_GP:RJP78138.1;Name=RJP78138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125496.1;locus_tag=C5O68_11315;product=hypothetical protein;protein_id=RJP78138.1;transl_table=11 PTQV01000090.1 Genbank gene 8242 8601 . - . ID=gene-C5O68_11320;Name=C5O68_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11320 PTQV01000090.1 Protein Homology CDS 8242 8601 . - 0 ID=cds-RJP78139.1;Parent=gene-C5O68_11320;Dbxref=NCBI_GP:RJP78139.1;Name=RJP78139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358162.1;locus_tag=C5O68_11320;product=DUF3397 domain-containing protein;protein_id=RJP78139.1;transl_table=11 PTQV01000090.1 Genbank gene 8525 9202 . + . ID=gene-C5O68_11325;Name=C5O68_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11325 PTQV01000090.1 Protein Homology CDS 8525 9202 . + 0 ID=cds-RJP78140.1;Parent=gene-C5O68_11325;Dbxref=NCBI_GP:RJP78140.1;Name=RJP78140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358163.1;locus_tag=C5O68_11325;product=TIGR01212 family radical SAM protein;protein_id=RJP78140.1;transl_table=11 PTQV01000090.1 Genbank gene 9203 9649 . + . ID=gene-C5O68_11330;Name=C5O68_11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11330 PTQV01000090.1 Protein Homology CDS 9203 9649 . + 0 ID=cds-RJP78141.1;Parent=gene-C5O68_11330;Dbxref=NCBI_GP:RJP78141.1;Name=RJP78141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397999.1;locus_tag=C5O68_11330;product=radical SAM protein;protein_id=RJP78141.1;transl_table=11 PTQV01000090.1 Genbank gene 9627 10190 . + . ID=gene-C5O68_11335;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=C5O68_11335 PTQV01000090.1 Protein Homology CDS 9627 10190 . + 0 ID=cds-RJP78142.1;Parent=gene-C5O68_11335;Dbxref=NCBI_GP:RJP78142.1;Name=RJP78142.1;gbkey=CDS;gene=mraW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358165.1;locus_tag=C5O68_11335;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=RJP78142.1;transl_table=11 PTQV01000090.1 Genbank gene 10183 10437 . + . ID=gene-C5O68_11340;Name=C5O68_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11340 PTQV01000090.1 Protein Homology CDS 10183 10437 . + 0 ID=cds-RJP78143.1;Parent=gene-C5O68_11340;Dbxref=NCBI_GP:RJP78143.1;Name=RJP78143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358166.1;locus_tag=C5O68_11340;product=hypothetical protein;protein_id=RJP78143.1;transl_table=11 PTQV01000090.1 Genbank gene 10449 12503 . + . ID=gene-C5O68_11345;Name=C5O68_11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11345 PTQV01000090.1 Protein Homology CDS 10449 12503 . + 0 ID=cds-RJP78144.1;Parent=gene-C5O68_11345;Dbxref=NCBI_GP:RJP78144.1;Name=RJP78144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358167.1;locus_tag=C5O68_11345;product=sodium:proton antiporter;protein_id=RJP78144.1;transl_table=11 PTQV01000090.1 Genbank gene 12667 13542 . + . ID=gene-C5O68_11350;Name=C5O68_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11350 PTQV01000090.1 Protein Homology CDS 12667 13542 . + 0 ID=cds-RJP78145.1;Parent=gene-C5O68_11350;Dbxref=NCBI_GP:RJP78145.1;Name=RJP78145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358168.1;locus_tag=C5O68_11350;product=YihY/virulence factor BrkB family protein;protein_id=RJP78145.1;transl_table=11 ##sequence-region PTQV01000091.1 1 1003 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000091.1 Genbank region 1 1003 . + . ID=PTQV01000091.1:1..1003;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000091.1 Genbank pseudogene 157 501 . - . ID=gene-C5O68_11355;Name=C5O68_11355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11355;pseudo=true PTQV01000091.1 Protein Homology CDS 157 501 . - 0 ID=cds-C5O68_11355;Parent=gene-C5O68_11355;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839193.1;locus_tag=C5O68_11355;product=IS30 family transposase;pseudo=true;transl_table=11 PTQV01000091.1 Genbank gene 545 1003 . + . ID=gene-C5O68_11360;Name=C5O68_11360;end_range=1003,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11360;partial=true PTQV01000091.1 Protein Homology CDS 545 1003 . + 0 ID=cds-RJP78114.1;Parent=gene-C5O68_11360;Dbxref=NCBI_GP:RJP78114.1;Name=RJP78114.1;end_range=1003,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13384.4;locus_tag=C5O68_11360;partial=true;product=IS630 family transposase;protein_id=RJP78114.1;transl_table=11 ##sequence-region PTQV01000092.1 1 890 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000092.1 Genbank region 1 890 . + . ID=PTQV01000092.1:1..890;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000092.1 Genbank gene 160 498 . + . ID=gene-C5O68_11365;Name=C5O68_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11365 PTQV01000092.1 Protein Homology CDS 160 498 . + 0 ID=cds-RJP78104.1;Parent=gene-C5O68_11365;Dbxref=NCBI_GP:RJP78104.1;Name=RJP78104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359465.1;locus_tag=C5O68_11365;product=transcriptional regulator;protein_id=RJP78104.1;transl_table=11 PTQV01000092.1 Genbank pseudogene 509 870 . + . ID=gene-C5O68_11370;Name=C5O68_11370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11370;pseudo=true PTQV01000092.1 Protein Homology CDS 509 870 . + 0 ID=cds-C5O68_11370;Parent=gene-C5O68_11370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022857.1;locus_tag=C5O68_11370;product=DUF1304 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region PTQV01000093.1 1 15190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000093.1 Genbank region 1 15190 . + . ID=PTQV01000093.1:1..15190;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000093.1 Genbank gene 160 3336 . - . ID=gene-C5O68_11375;Name=C5O68_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11375 PTQV01000093.1 Protein Homology CDS 160 3336 . - 0 ID=cds-RJP78068.1;Parent=gene-C5O68_11375;Dbxref=NCBI_GP:RJP78068.1;Name=RJP78068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446343.1;locus_tag=C5O68_11375;product=carbamoyl-phosphate synthase large subunit;protein_id=RJP78068.1;transl_table=11 PTQV01000093.1 Genbank gene 3784 4863 . - . ID=gene-C5O68_11380;Name=C5O68_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11380 PTQV01000093.1 Protein Homology CDS 3784 4863 . - 0 ID=cds-RJP78069.1;Parent=gene-C5O68_11380;Dbxref=NCBI_GP:RJP78069.1;Name=RJP78069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358747.1;locus_tag=C5O68_11380;product=carbamoyl-phosphate synthase small subunit;protein_id=RJP78069.1;transl_table=11 PTQV01000093.1 Genbank gene 4913 5836 . - . ID=gene-C5O68_11385;Name=C5O68_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11385 PTQV01000093.1 Protein Homology CDS 4913 5836 . - 0 ID=cds-RJP78070.1;Parent=gene-C5O68_11385;Dbxref=NCBI_GP:RJP78070.1;Name=RJP78070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446345.1;locus_tag=C5O68_11385;product=aspartate carbamoyltransferase;protein_id=RJP78070.1;transl_table=11 PTQV01000093.1 Genbank gene 5855 6376 . - . ID=gene-C5O68_11390;Name=C5O68_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11390 PTQV01000093.1 Protein Homology CDS 5855 6376 . - 0 ID=cds-RJP78071.1;Parent=gene-C5O68_11390;Dbxref=NCBI_GP:RJP78071.1;Name=RJP78071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358749.1;locus_tag=C5O68_11390;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=RJP78071.1;transl_table=11 PTQV01000093.1 Genbank gene 6587 7216 . - . ID=gene-C5O68_11395;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=C5O68_11395 PTQV01000093.1 Protein Homology CDS 6587 7216 . - 0 ID=cds-RJP78072.1;Parent=gene-C5O68_11395;Dbxref=NCBI_GP:RJP78072.1;Name=RJP78072.1;gbkey=CDS;gene=nth;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358750.1;locus_tag=C5O68_11395;product=endonuclease III;protein_id=RJP78072.1;transl_table=11 PTQV01000093.1 Genbank gene 7216 7758 . - . ID=gene-C5O68_11400;Name=C5O68_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11400 PTQV01000093.1 Protein Homology CDS 7216 7758 . - 0 ID=cds-RJP78073.1;Parent=gene-C5O68_11400;Dbxref=NCBI_GP:RJP78073.1;Name=RJP78073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446348.1;locus_tag=C5O68_11400;product=DUF177 domain-containing protein;protein_id=RJP78073.1;transl_table=11 PTQV01000093.1 Genbank pseudogene 7928 8244 . + . ID=gene-C5O68_11405;Name=C5O68_11405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11405;pseudo=true PTQV01000093.1 Protein Homology CDS 7928 8244 . + 0 ID=cds-C5O68_11405;Parent=gene-C5O68_11405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446349.1;locus_tag=C5O68_11405;product=helicase BlpT;pseudo=true;transl_table=11 PTQV01000093.1 Genbank pseudogene 8518 10044 . + . ID=gene-C5O68_11410;Name=C5O68_11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11410;pseudo=true PTQV01000093.1 Protein Homology CDS 8518 10044 . + 0 ID=cds-C5O68_11410;Parent=gene-C5O68_11410;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358754.1;locus_tag=C5O68_11410;product=multidrug ABC transporter ATP-binding protein;pseudo=true;transl_table=11 PTQV01000093.1 Genbank gene 10192 11091 . - . ID=gene-C5O68_11415;Name=C5O68_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11415 PTQV01000093.1 Protein Homology CDS 10192 11091 . - 0 ID=cds-RJP78074.1;Parent=gene-C5O68_11415;Dbxref=NCBI_GP:RJP78074.1;Name=RJP78074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446351.1;locus_tag=C5O68_11415;product=zinc metalloprotease HtpX;protein_id=RJP78074.1;transl_table=11 PTQV01000093.1 Genbank gene 11093 11653 . - . ID=gene-C5O68_11420;Name=C5O68_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11420 PTQV01000093.1 Protein Homology CDS 11093 11653 . - 0 ID=cds-RJP78075.1;Parent=gene-C5O68_11420;Dbxref=NCBI_GP:RJP78075.1;Name=RJP78075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446352.1;locus_tag=C5O68_11420;product=LemA family protein;protein_id=RJP78075.1;transl_table=11 PTQV01000093.1 Genbank gene 11747 12460 . + . ID=gene-C5O68_11425;Name=C5O68_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11425 PTQV01000093.1 Protein Homology CDS 11747 12460 . + 0 ID=cds-RJP78076.1;Parent=gene-C5O68_11425;Dbxref=NCBI_GP:RJP78076.1;Name=RJP78076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446353.1;locus_tag=C5O68_11425;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=RJP78076.1;transl_table=11 PTQV01000093.1 Genbank gene 12678 13997 . + . ID=gene-C5O68_11430;Name=C5O68_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11430 PTQV01000093.1 Protein Homology CDS 12678 13997 . + 0 ID=cds-RJP78077.1;Parent=gene-C5O68_11430;Dbxref=NCBI_GP:RJP78077.1;Name=RJP78077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358758.1;locus_tag=C5O68_11430;product=uracil permease;protein_id=RJP78077.1;transl_table=11 PTQV01000093.1 Genbank pseudogene 14407 15190 . - . ID=gene-C5O68_11435;Name=C5O68_11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11435;pseudo=true PTQV01000093.1 Protein Homology CDS 14407 15190 . - 2 ID=cds-C5O68_11435;Parent=gene-C5O68_11435;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611577.1;locus_tag=C5O68_11435;product=IS630 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000094.1 1 15746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000094.1 Genbank region 1 15746 . + . ID=PTQV01000094.1:1..15746;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000094.1 Genbank pseudogene 1 997 . - . ID=gene-C5O68_11440;Name=C5O68_11440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11440;pseudo=true PTQV01000094.1 Protein Homology CDS 1 997 . - 0 ID=cds-C5O68_11440;Parent=gene-C5O68_11440;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611311.1;locus_tag=C5O68_11440;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 PTQV01000094.1 Genbank gene 1258 1455 . + . ID=gene-C5O68_11445;Name=C5O68_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11445 PTQV01000094.1 Protein Homology CDS 1258 1455 . + 0 ID=cds-RJP78027.1;Parent=gene-C5O68_11445;Dbxref=NCBI_GP:RJP78027.1;Name=RJP78027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397596.1;locus_tag=C5O68_11445;product=XRE family transcriptional regulator;protein_id=RJP78027.1;transl_table=11 PTQV01000094.1 Genbank gene 1726 1866 . + . ID=gene-C5O68_11450;Name=C5O68_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11450 PTQV01000094.1 Protein Homology CDS 1726 1866 . + 0 ID=cds-RJP78028.1;Parent=gene-C5O68_11450;Dbxref=NCBI_GP:RJP78028.1;Name=RJP78028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003028284.1;locus_tag=C5O68_11450;product=hypothetical protein;protein_id=RJP78028.1;transl_table=11 PTQV01000094.1 Genbank gene 1966 3534 . + . ID=gene-C5O68_11455;Name=C5O68_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11455 PTQV01000094.1 Protein Homology CDS 1966 3534 . + 0 ID=cds-RJP78029.1;Parent=gene-C5O68_11455;Dbxref=NCBI_GP:RJP78029.1;Name=RJP78029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397594.1;locus_tag=C5O68_11455;product=recombinase;protein_id=RJP78029.1;transl_table=11 PTQV01000094.1 Genbank gene 3534 5150 . + . ID=gene-C5O68_11460;Name=C5O68_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11460 PTQV01000094.1 Protein Homology CDS 3534 5150 . + 0 ID=cds-RJP78030.1;Parent=gene-C5O68_11460;Dbxref=NCBI_GP:RJP78030.1;Name=RJP78030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399136.1;locus_tag=C5O68_11460;product=recombinase;protein_id=RJP78030.1;transl_table=11 PTQV01000094.1 Genbank gene 5143 6582 . + . ID=gene-C5O68_11465;Name=C5O68_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11465 PTQV01000094.1 Protein Homology CDS 5143 6582 . + 0 ID=cds-RJP78031.1;Parent=gene-C5O68_11465;Dbxref=NCBI_GP:RJP78031.1;Name=RJP78031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016397592.1;locus_tag=C5O68_11465;product=recombinase;protein_id=RJP78031.1;transl_table=11 PTQV01000094.1 Genbank pseudogene 6693 6995 . + . ID=gene-C5O68_11470;Name=C5O68_11470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11470;pseudo=true PTQV01000094.1 Protein Homology CDS 6693 6995 . + 0 ID=cds-C5O68_11470;Parent=gene-C5O68_11470;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421872.1;locus_tag=C5O68_11470;product=DNA mismatch repair protein MutT;pseudo=true;transl_table=11 PTQV01000094.1 Genbank gene 6992 7465 . + . ID=gene-C5O68_11475;Name=C5O68_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11475 PTQV01000094.1 Protein Homology CDS 6992 7465 . + 0 ID=cds-RJP78032.1;Parent=gene-C5O68_11475;Dbxref=NCBI_GP:RJP78032.1;Name=RJP78032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003013602.1;locus_tag=C5O68_11475;product=GNAT family N-acetyltransferase;protein_id=RJP78032.1;transl_table=11 PTQV01000094.1 Genbank gene 7601 8551 . + . ID=gene-C5O68_11480;Name=C5O68_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11480 PTQV01000094.1 Protein Homology CDS 7601 8551 . + 0 ID=cds-RJP78033.1;Parent=gene-C5O68_11480;Dbxref=NCBI_GP:RJP78033.1;Name=RJP78033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_359200.2;locus_tag=C5O68_11480;product=50S ribosomal protein L11 methyltransferase;protein_id=RJP78033.1;transl_table=11 PTQV01000094.1 Genbank gene 8553 9296 . + . ID=gene-C5O68_11485;Name=C5O68_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11485 PTQV01000094.1 Protein Homology CDS 8553 9296 . + 0 ID=cds-RJP78034.1;Parent=gene-C5O68_11485;Dbxref=NCBI_GP:RJP78034.1;Name=RJP78034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445681.1;locus_tag=C5O68_11485;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=RJP78034.1;transl_table=11 PTQV01000094.1 Genbank gene 9307 11103 . + . ID=gene-C5O68_11490;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=C5O68_11490 PTQV01000094.1 Protein Homology CDS 9307 11103 . + 0 ID=cds-RJP78035.1;Parent=gene-C5O68_11490;Dbxref=NCBI_GP:RJP78035.1;Name=RJP78035.1;gbkey=CDS;gene=pepF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003445682.1;locus_tag=C5O68_11490;product=oligoendopeptidase F;protein_id=RJP78035.1;transl_table=11 PTQV01000094.1 Genbank gene 11164 11841 . - . ID=gene-C5O68_11495;Name=C5O68_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11495 PTQV01000094.1 Protein Homology CDS 11164 11841 . - 0 ID=cds-RJP78036.1;Parent=gene-C5O68_11495;Dbxref=NCBI_GP:RJP78036.1;Name=RJP78036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000433071.1;locus_tag=C5O68_11495;product=transcriptional regulator;protein_id=RJP78036.1;transl_table=11 PTQV01000094.1 Genbank gene 12109 13221 . + . ID=gene-C5O68_11500;Name=C5O68_11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11500 PTQV01000094.1 Protein Homology CDS 12109 13221 . + 0 ID=cds-RJP78037.1;Parent=gene-C5O68_11500;Dbxref=NCBI_GP:RJP78037.1;Name=RJP78037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399294.1;locus_tag=C5O68_11500;product=thiamine biosynthesis protein ThiF;protein_id=RJP78037.1;transl_table=11 PTQV01000094.1 Genbank gene 13191 13961 . + . ID=gene-C5O68_11505;Name=C5O68_11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11505 PTQV01000094.1 Protein Homology CDS 13191 13961 . + 0 ID=cds-RJP78038.1;Parent=gene-C5O68_11505;Dbxref=NCBI_GP:RJP78038.1;Name=RJP78038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000966490.1;locus_tag=C5O68_11505;product=ABC transporter ATP-binding protein;protein_id=RJP78038.1;transl_table=11 PTQV01000094.1 Genbank gene 13954 14718 . + . ID=gene-C5O68_11510;Name=C5O68_11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11510 PTQV01000094.1 Protein Homology CDS 13954 14718 . + 0 ID=cds-RJP78039.1;Parent=gene-C5O68_11510;Dbxref=NCBI_GP:RJP78039.1;Name=RJP78039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863667.1;locus_tag=C5O68_11510;product=ABC transporter permease;protein_id=RJP78039.1;transl_table=11 PTQV01000094.1 Genbank pseudogene 14983 15231 . - . ID=gene-C5O68_11515;Name=C5O68_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11515;pseudo=true PTQV01000094.1 Protein Homology CDS 14983 15231 . - 0 ID=cds-C5O68_11515;Parent=gene-C5O68_11515;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358409.1;locus_tag=C5O68_11515;product=hypothetical protein;pseudo=true;transl_table=11 PTQV01000094.1 Genbank pseudogene 15231 15584 . + . ID=gene-C5O68_11520;Name=C5O68_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11520;pseudo=true PTQV01000094.1 Protein Homology CDS 15231 15584 . + 0 ID=cds-C5O68_11520;Parent=gene-C5O68_11520;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000427006.1;locus_tag=C5O68_11520;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 PTQV01000094.1 Genbank pseudogene 15581 15655 . + . ID=gene-C5O68_11525;Name=C5O68_11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11525;pseudo=true PTQV01000094.1 Protein Homology CDS 15581 15655 . + 0 ID=cds-C5O68_11525;Parent=gene-C5O68_11525;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_11525;product=chlorohydrolase;pseudo=true;transl_table=11 ##sequence-region PTQV01000095.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000095.1 Genbank region 1 248 . + . ID=PTQV01000095.1:1..248;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000095.1 Genbank gene 1 248 . - . ID=gene-C5O68_11530;Name=C5O68_11530;end_range=248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11530;partial=true;start_range=.,1 PTQV01000095.1 Protein Homology CDS 1 248 . - 0 ID=cds-RJP78000.1;Parent=gene-C5O68_11530;Dbxref=NCBI_GP:RJP78000.1;Name=RJP78000.1;end_range=248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446414.1;locus_tag=C5O68_11530;partial=true;product=hypothetical protein;protein_id=RJP78000.1;start_range=.,1;transl_table=11 ##sequence-region PTQV01000096.1 1 28144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000096.1 Genbank region 1 28144 . + . ID=PTQV01000096.1:1..28144;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000096.1 Genbank gene 151 621 . - . ID=gene-C5O68_11535;Name=C5O68_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11535 PTQV01000096.1 Protein Homology CDS 151 621 . - 0 ID=cds-RJP77934.1;Parent=gene-C5O68_11535;Dbxref=NCBI_GP:RJP77934.1;Name=RJP77934.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358387.1;locus_tag=C5O68_11535;product=arginine repressor;protein_id=RJP77934.1;transl_table=11 PTQV01000096.1 Genbank gene 638 2911 . - . ID=gene-C5O68_11540;Name=C5O68_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11540 PTQV01000096.1 Protein Homology CDS 638 2911 . - 0 ID=cds-RJP77935.1;Parent=gene-C5O68_11540;Dbxref=NCBI_GP:RJP77935.1;Name=RJP77935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446113.1;locus_tag=C5O68_11540;product=Xaa-Pro dipeptidyl-peptidase;protein_id=RJP77935.1;transl_table=11 PTQV01000096.1 Genbank gene 3231 6359 . + . ID=gene-C5O68_11545;Name=C5O68_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11545 PTQV01000096.1 Protein Homology CDS 3231 6359 . + 0 ID=cds-RJP77936.1;Parent=gene-C5O68_11545;Dbxref=NCBI_GP:RJP77936.1;Name=RJP77936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358389.1;locus_tag=C5O68_11545;product=DNA polymerase III subunit alpha;protein_id=RJP77936.1;transl_table=11 PTQV01000096.1 Genbank gene 6442 7449 . + . ID=gene-C5O68_11550;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=C5O68_11550 PTQV01000096.1 Protein Homology CDS 6442 7449 . + 0 ID=cds-RJP77937.1;Parent=gene-C5O68_11550;Dbxref=NCBI_GP:RJP77937.1;Name=RJP77937.1;gbkey=CDS;gene=pfkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358390.1;locus_tag=C5O68_11550;product=6-phosphofructokinase;protein_id=RJP77937.1;transl_table=11 PTQV01000096.1 Genbank gene 7508 9013 . + . ID=gene-C5O68_11555;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=C5O68_11555 PTQV01000096.1 Protein Homology CDS 7508 9013 . + 0 ID=cds-RJP77938.1;Parent=gene-C5O68_11555;Dbxref=NCBI_GP:RJP77938.1;Name=RJP77938.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358391.1;locus_tag=C5O68_11555;product=pyruvate kinase;protein_id=RJP77938.1;transl_table=11 PTQV01000096.1 Genbank pseudogene 9104 10370 . - . ID=gene-C5O68_11560;Name=C5O68_11560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11560;pseudo=true PTQV01000096.1 Protein Homology CDS 9104 10370 . - 0 ID=cds-C5O68_11560;Parent=gene-C5O68_11560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000436265.1;locus_tag=C5O68_11560;product=ISL3 family transposase;pseudo=true;transl_table=11 PTQV01000096.1 Genbank gene 10609 10974 . - . ID=gene-C5O68_11565;Name=C5O68_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11565 PTQV01000096.1 Protein Homology CDS 10609 10974 . - 0 ID=cds-RJP77939.1;Parent=gene-C5O68_11565;Dbxref=NCBI_GP:RJP77939.1;Name=RJP77939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167985.1;locus_tag=C5O68_11565;product=integrase;protein_id=RJP77939.1;transl_table=11 PTQV01000096.1 Genbank pseudogene 11041 11121 . - . ID=gene-C5O68_11570;Name=C5O68_11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11570;pseudo=true PTQV01000096.1 Protein Homology CDS 11041 11121 . - 0 ID=cds-C5O68_11570;Parent=gene-C5O68_11570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155203.1;locus_tag=C5O68_11570;product=growth inhibitor PemK;pseudo=true;transl_table=11 PTQV01000096.1 Genbank gene 11257 11451 . - . ID=gene-C5O68_11575;Name=C5O68_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11575 PTQV01000096.1 Protein Homology CDS 11257 11451 . - 0 ID=cds-RJP77940.1;Parent=gene-C5O68_11575;Dbxref=NCBI_GP:RJP77940.1;Name=RJP77940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284915.1;locus_tag=C5O68_11575;product=S26 family signal peptidase;protein_id=RJP77940.1;transl_table=11 PTQV01000096.1 Genbank pseudogene 11548 11793 . - . ID=gene-C5O68_11580;Name=C5O68_11580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11580;pseudo=true PTQV01000096.1 Protein Homology CDS 11548 11793 . - 0 ID=cds-C5O68_11580;Parent=gene-C5O68_11580;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536835.1;locus_tag=C5O68_11580;product=phage repressor protein;pseudo=true;transl_table=11 PTQV01000096.1 Genbank gene 12123 12995 . + . ID=gene-C5O68_11585;Name=C5O68_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11585 PTQV01000096.1 Protein Homology CDS 12123 12995 . + 0 ID=cds-RJP77941.1;Parent=gene-C5O68_11585;Dbxref=NCBI_GP:RJP77941.1;Name=RJP77941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358393.1;locus_tag=C5O68_11585;product=DUF4300 domain-containing protein;protein_id=RJP77941.1;transl_table=11 PTQV01000096.1 Genbank gene 13008 13187 . + . ID=gene-C5O68_11590;Name=C5O68_11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11590 PTQV01000096.1 Protein Homology CDS 13008 13187 . + 0 ID=cds-RJP77942.1;Parent=gene-C5O68_11590;Dbxref=NCBI_GP:RJP77942.1;Name=RJP77942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000859476.1;locus_tag=C5O68_11590;product=hypothetical protein;protein_id=RJP77942.1;transl_table=11 PTQV01000096.1 Genbank gene 13300 13611 . + . ID=gene-C5O68_11595;Name=C5O68_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11595 PTQV01000096.1 Protein Homology CDS 13300 13611 . + 0 ID=cds-RJP77943.1;Parent=gene-C5O68_11595;Dbxref=NCBI_GP:RJP77943.1;Name=RJP77943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446201.1;locus_tag=C5O68_11595;product=hypothetical protein;protein_id=RJP77943.1;transl_table=11 PTQV01000096.1 Genbank gene 13615 14331 . + . ID=gene-C5O68_11600;Name=C5O68_11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11600 PTQV01000096.1 Protein Homology CDS 13615 14331 . + 0 ID=cds-RJP77944.1;Parent=gene-C5O68_11600;Dbxref=NCBI_GP:RJP77944.1;Name=RJP77944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759787.1;locus_tag=C5O68_11600;product=alpha/beta hydrolase;protein_id=RJP77944.1;transl_table=11 PTQV01000096.1 Genbank gene 14461 15276 . - . ID=gene-C5O68_11605;Name=C5O68_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11605 PTQV01000096.1 Protein Homology CDS 14461 15276 . - 0 ID=cds-RJP77945.1;Parent=gene-C5O68_11605;Dbxref=NCBI_GP:RJP77945.1;Name=RJP77945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358398.1;locus_tag=C5O68_11605;product=TIGR03943 family protein;protein_id=RJP77945.1;transl_table=11 PTQV01000096.1 Genbank gene 15273 16178 . - . ID=gene-C5O68_11610;Name=C5O68_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11610 PTQV01000096.1 Protein Homology CDS 15273 16178 . - 0 ID=cds-RJP77946.1;Parent=gene-C5O68_11610;Dbxref=NCBI_GP:RJP77946.1;Name=RJP77946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358399.1;locus_tag=C5O68_11610;product=permease;protein_id=RJP77946.1;transl_table=11 PTQV01000096.1 Genbank gene 16179 16310 . - . ID=gene-C5O68_11615;Name=C5O68_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11615 PTQV01000096.1 Protein Homology CDS 16179 16310 . - 0 ID=cds-RJP77947.1;Parent=gene-C5O68_11615;Dbxref=NCBI_GP:RJP77947.1;Name=RJP77947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446195.1;locus_tag=C5O68_11615;product=hypothetical protein;protein_id=RJP77947.1;transl_table=11 PTQV01000096.1 Genbank gene 16473 16832 . + . ID=gene-C5O68_11620;Name=C5O68_11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11620 PTQV01000096.1 Protein Homology CDS 16473 16832 . + 0 ID=cds-RJP77948.1;Parent=gene-C5O68_11620;Dbxref=NCBI_GP:RJP77948.1;Name=RJP77948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284914.1;locus_tag=C5O68_11620;product=hypothetical protein;protein_id=RJP77948.1;transl_table=11 PTQV01000096.1 Genbank gene 16940 17812 . + . ID=gene-C5O68_11625;Name=C5O68_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11625 PTQV01000096.1 Protein Homology CDS 16940 17812 . + 0 ID=cds-RJP77949.1;Parent=gene-C5O68_11625;Dbxref=NCBI_GP:RJP77949.1;Name=RJP77949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446387.1;locus_tag=C5O68_11625;product=EfeM/EfeO family lipoprotein;protein_id=RJP77949.1;transl_table=11 PTQV01000096.1 Genbank gene 17818 19032 . + . ID=gene-C5O68_11630;Name=C5O68_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11630 PTQV01000096.1 Protein Homology CDS 17818 19032 . + 0 ID=cds-RJP77950.1;Parent=gene-C5O68_11630;Dbxref=NCBI_GP:RJP77950.1;Name=RJP77950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446386.1;locus_tag=C5O68_11630;product=deferrochelatase/peroxidase EfeB;protein_id=RJP77950.1;transl_table=11 PTQV01000096.1 Genbank gene 19007 20695 . + . ID=gene-C5O68_11635;Name=C5O68_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11635 PTQV01000096.1 Protein Homology CDS 19007 20695 . + 0 ID=cds-RJP77951.1;Parent=gene-C5O68_11635;Dbxref=NCBI_GP:RJP77951.1;Name=RJP77951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446385.1;locus_tag=C5O68_11635;product=FTR1 family iron permease;protein_id=RJP77951.1;transl_table=11 PTQV01000096.1 Genbank gene 20696 21427 . + . ID=gene-C5O68_11640;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=C5O68_11640 PTQV01000096.1 Protein Homology CDS 20696 21427 . + 0 ID=cds-RJP77952.1;Parent=gene-C5O68_11640;Dbxref=NCBI_GP:RJP77952.1;Name=RJP77952.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446384.1;locus_tag=C5O68_11640;product=twin-arginine translocase subunit TatC;protein_id=RJP77952.1;transl_table=11 PTQV01000096.1 Genbank gene 21411 21581 . + . ID=gene-C5O68_11645;Name=C5O68_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11645 PTQV01000096.1 Protein Homology CDS 21411 21581 . + 0 ID=cds-RJP77953.1;Parent=gene-C5O68_11645;Dbxref=NCBI_GP:RJP77953.1;Name=RJP77953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446383.1;locus_tag=C5O68_11645;product=twin-arginine translocase TatA/TatE family subunit;protein_id=RJP77953.1;transl_table=11 PTQV01000096.1 Genbank gene 21717 22076 . - . ID=gene-C5O68_11650;Name=C5O68_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11650 PTQV01000096.1 Protein Homology CDS 21717 22076 . - 0 ID=cds-RJP77954.1;Parent=gene-C5O68_11650;Dbxref=NCBI_GP:RJP77954.1;Name=RJP77954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446382.1;locus_tag=C5O68_11650;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=RJP77954.1;transl_table=11 PTQV01000096.1 Genbank gene 22066 22437 . - . ID=gene-C5O68_11655;Name=C5O68_11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11655 PTQV01000096.1 Protein Homology CDS 22066 22437 . - 0 ID=cds-RJP77966.1;Parent=gene-C5O68_11655;Dbxref=NCBI_GP:RJP77966.1;Name=RJP77966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446381.1;locus_tag=C5O68_11655;product=RelB antitoxin;protein_id=RJP77966.1;transl_table=11 PTQV01000096.1 Genbank gene 22540 22782 . - . ID=gene-C5O68_11660;Name=C5O68_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11660 PTQV01000096.1 Protein Homology CDS 22540 22782 . - 0 ID=cds-RJP77955.1;Parent=gene-C5O68_11660;Dbxref=NCBI_GP:RJP77955.1;Name=RJP77955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358770.1;locus_tag=C5O68_11660;product=50S ribosomal protein L31 type B;protein_id=RJP77955.1;transl_table=11 PTQV01000096.1 Genbank gene 22878 23813 . - . ID=gene-C5O68_11665;Name=C5O68_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11665 PTQV01000096.1 Protein Homology CDS 22878 23813 . - 0 ID=cds-RJP77956.1;Parent=gene-C5O68_11665;Dbxref=NCBI_GP:RJP77956.1;Name=RJP77956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446379.1;locus_tag=C5O68_11665;product=bifunctional oligoribonuclease/PAP phosphatase;protein_id=RJP77956.1;transl_table=11 PTQV01000096.1 Genbank gene 23917 24360 . + . ID=gene-C5O68_11670;Name=C5O68_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11670 PTQV01000096.1 Protein Homology CDS 23917 24360 . + 0 ID=cds-RJP77957.1;Parent=gene-C5O68_11670;Dbxref=NCBI_GP:RJP77957.1;Name=RJP77957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358768.1;locus_tag=C5O68_11670;product=flavodoxin;protein_id=RJP77957.1;transl_table=11 PTQV01000096.1 Genbank gene 24476 24742 . + . ID=gene-C5O68_11675;Name=C5O68_11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11675 PTQV01000096.1 Protein Homology CDS 24476 24742 . + 0 ID=cds-RJP77958.1;Parent=gene-C5O68_11675;Dbxref=NCBI_GP:RJP77958.1;Name=RJP77958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446377.1;locus_tag=C5O68_11675;product=chorismate mutase;protein_id=RJP77958.1;transl_table=11 PTQV01000096.1 Genbank gene 24739 25101 . + . ID=gene-C5O68_11680;Name=C5O68_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11680 PTQV01000096.1 Protein Homology CDS 24739 25101 . + 0 ID=cds-RJP77959.1;Parent=gene-C5O68_11680;Dbxref=NCBI_GP:RJP77959.1;Name=RJP77959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358766.1;locus_tag=C5O68_11680;product=fluoride efflux transporter CrcB;protein_id=RJP77959.1;transl_table=11 PTQV01000096.1 Genbank gene 25220 25567 . + . ID=gene-C5O68_11685;Name=C5O68_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11685 PTQV01000096.1 Protein Homology CDS 25220 25567 . + 0 ID=cds-RJP77960.1;Parent=gene-C5O68_11685;Dbxref=NCBI_GP:RJP77960.1;Name=RJP77960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=C5O68_11685;product=50S ribosomal protein L19;protein_id=RJP77960.1;transl_table=11 PTQV01000096.1 Genbank gene 25608 25679 . + . ID=gene-C5O68_11690;Name=C5O68_11690;gbkey=Gene;gene_biotype=tRNA;locus_tag=C5O68_11690 PTQV01000096.1 tRNAscan-SE tRNA 25608 25679 . + . ID=rna-C5O68_11690;Parent=gene-C5O68_11690;anticodon=(pos:25641..25643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_11690;product=tRNA-Arg PTQV01000096.1 tRNAscan-SE exon 25608 25679 . + . ID=exon-C5O68_11690-1;Parent=rna-C5O68_11690;anticodon=(pos:25641..25643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=C5O68_11690;product=tRNA-Arg PTQV01000096.1 Genbank gene 25952 26140 . + . ID=gene-C5O68_11695;Name=C5O68_11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11695 PTQV01000096.1 Protein Homology CDS 25952 26140 . + 0 ID=cds-RJP77961.1;Parent=gene-C5O68_11695;Dbxref=NCBI_GP:RJP77961.1;Name=RJP77961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003088683.1;locus_tag=C5O68_11695;product=type II toxin-antitoxin system HicA family toxin;protein_id=RJP77961.1;transl_table=11 PTQV01000096.1 Genbank gene 26198 26575 . + . ID=gene-C5O68_11700;Name=C5O68_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11700 PTQV01000096.1 Protein Homology CDS 26198 26575 . + 0 ID=cds-RJP77962.1;Parent=gene-C5O68_11700;Dbxref=NCBI_GP:RJP77962.1;Name=RJP77962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002282907.1;locus_tag=C5O68_11700;product=HicB family protein;protein_id=RJP77962.1;transl_table=11 PTQV01000096.1 Genbank gene 26665 26826 . + . ID=gene-C5O68_11705;Name=C5O68_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11705 PTQV01000096.1 Protein Homology CDS 26665 26826 . + 0 ID=cds-RJP77963.1;Parent=gene-C5O68_11705;Dbxref=NCBI_GP:RJP77963.1;Name=RJP77963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000077978.1;locus_tag=C5O68_11705;product=type II toxin-antitoxin system antitoxin%2C RelB/DinJ family;protein_id=RJP77963.1;transl_table=11 PTQV01000096.1 Genbank gene 26872 27186 . + . ID=gene-C5O68_11710;Name=C5O68_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11710 PTQV01000096.1 Protein Homology CDS 26872 27186 . + 0 ID=cds-RJP77964.1;Parent=gene-C5O68_11710;Dbxref=NCBI_GP:RJP77964.1;Name=RJP77964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446372.1;locus_tag=C5O68_11710;product=nucleotidyltransferase domain-containing protein;protein_id=RJP77964.1;transl_table=11 PTQV01000096.1 Genbank gene 27167 27541 . + . ID=gene-C5O68_11715;Name=C5O68_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11715 PTQV01000096.1 Protein Homology CDS 27167 27541 . + 0 ID=cds-RJP77965.1;Parent=gene-C5O68_11715;Dbxref=NCBI_GP:RJP77965.1;Name=RJP77965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446371.1;locus_tag=C5O68_11715;product=DUF86 domain-containing protein;protein_id=RJP77965.1;transl_table=11 PTQV01000096.1 Genbank pseudogene 27668 27877 . + . ID=gene-C5O68_11720;Name=C5O68_11720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11720;pseudo=true PTQV01000096.1 Protein Homology CDS 27668 27877 . + 0 ID=cds-C5O68_11720;Parent=gene-C5O68_11720;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446370.1;locus_tag=C5O68_11720;product=site-specific recombinase;pseudo=true;transl_table=11 PTQV01000096.1 Genbank pseudogene 27892 27999 . - . ID=gene-C5O68_11725;Name=C5O68_11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=C5O68_11725;pseudo=true PTQV01000096.1 Protein Homology CDS 27892 27999 . - 0 ID=cds-C5O68_11725;Parent=gene-C5O68_11725;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105201.1;locus_tag=C5O68_11725;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region PTQV01000097.1 1 3006 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000097.1 Genbank region 1 3006 . + . ID=PTQV01000097.1:1..3006;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000097.1 Genbank gene 180 941 . - . ID=gene-C5O68_11730;Name=C5O68_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11730 PTQV01000097.1 Protein Homology CDS 180 941 . - 0 ID=cds-RJP77817.1;Parent=gene-C5O68_11730;Dbxref=NCBI_GP:RJP77817.1;Name=RJP77817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007284985.1;locus_tag=C5O68_11730;product=hypothetical protein;protein_id=RJP77817.1;transl_table=11 PTQV01000097.1 Genbank gene 904 2634 . - . ID=gene-C5O68_11735;Name=C5O68_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11735 PTQV01000097.1 Protein Homology CDS 904 2634 . - 0 ID=cds-RJP77818.1;Parent=gene-C5O68_11735;Dbxref=NCBI_GP:RJP77818.1;Name=RJP77818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001250146.1;locus_tag=C5O68_11735;product=secretion protein;protein_id=RJP77818.1;transl_table=11 ##sequence-region PTQV01000098.1 1 2715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000098.1 Genbank region 1 2715 . + . ID=PTQV01000098.1:1..2715;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000098.1 Genbank gene 1 178 . - . ID=gene-C5O68_11740;Name=C5O68_11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11740;partial=true;start_range=.,1 PTQV01000098.1 Protein Homology CDS 1 178 . - 0 ID=cds-RJP77808.1;Parent=gene-C5O68_11740;Dbxref=NCBI_GP:RJP77808.1;Name=RJP77808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001843875.1;locus_tag=C5O68_11740;partial=true;product=IS66 family insertion sequence hypothetical protein;protein_id=RJP77808.1;start_range=.,1;transl_table=11 PTQV01000098.1 Genbank gene 159 344 . - . ID=gene-C5O68_11745;Name=C5O68_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11745 PTQV01000098.1 Protein Homology CDS 159 344 . - 0 ID=cds-RJP77806.1;Parent=gene-C5O68_11745;Dbxref=NCBI_GP:RJP77806.1;Name=RJP77806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001136123.1;locus_tag=C5O68_11745;product=hypothetical protein;protein_id=RJP77806.1;transl_table=11 PTQV01000098.1 Genbank gene 440 2536 . - . ID=gene-C5O68_11750;Name=C5O68_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11750 PTQV01000098.1 Protein Homology CDS 440 2536 . - 0 ID=cds-RJP77807.1;Parent=gene-C5O68_11750;Dbxref=NCBI_GP:RJP77807.1;Name=RJP77807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016399394.1;locus_tag=C5O68_11750;product=alpha-mannosidase;protein_id=RJP77807.1;transl_table=11 ##sequence-region PTQV01000099.1 1 10900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000099.1 Genbank region 1 10900 . + . ID=PTQV01000099.1:1..10900;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000099.1 Genbank gene 114 1454 . + . ID=gene-C5O68_11755;Name=C5O68_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11755 PTQV01000099.1 Protein Homology CDS 114 1454 . + 0 ID=cds-RJP77782.1;Parent=gene-C5O68_11755;Dbxref=NCBI_GP:RJP77782.1;Name=RJP77782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446126.1;locus_tag=C5O68_11755;product=exodeoxyribonuclease VII large subunit;protein_id=RJP77782.1;transl_table=11 PTQV01000099.1 Genbank gene 1432 1644 . + . ID=gene-C5O68_11760;Name=C5O68_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11760 PTQV01000099.1 Protein Homology CDS 1432 1644 . + 0 ID=cds-RJP77783.1;Parent=gene-C5O68_11760;Dbxref=NCBI_GP:RJP77783.1;Name=RJP77783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358681.1;locus_tag=C5O68_11760;product=exodeoxyribonuclease 7 small subunit;protein_id=RJP77783.1;transl_table=11 PTQV01000099.1 Genbank gene 1641 2516 . + . ID=gene-C5O68_11765;Name=C5O68_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11765 PTQV01000099.1 Protein Homology CDS 1641 2516 . + 0 ID=cds-RJP77784.1;Parent=gene-C5O68_11765;Dbxref=NCBI_GP:RJP77784.1;Name=RJP77784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358680.1;locus_tag=C5O68_11765;product=polyprenyl synthetase family protein;protein_id=RJP77784.1;transl_table=11 PTQV01000099.1 Genbank gene 2509 3324 . + . ID=gene-C5O68_11770;Name=C5O68_11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11770 PTQV01000099.1 Protein Homology CDS 2509 3324 . + 0 ID=cds-RJP77785.1;Parent=gene-C5O68_11770;Dbxref=NCBI_GP:RJP77785.1;Name=RJP77785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446129.1;locus_tag=C5O68_11770;product=TlyA family rRNA (cytidine-2'-O)-methyltransferase;protein_id=RJP77785.1;transl_table=11 PTQV01000099.1 Genbank gene 3317 3748 . + . ID=gene-C5O68_11775;Name=C5O68_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11775 PTQV01000099.1 Protein Homology CDS 3317 3748 . + 0 ID=cds-RJP77786.1;Parent=gene-C5O68_11775;Dbxref=NCBI_GP:RJP77786.1;Name=RJP77786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358678.1;locus_tag=C5O68_11775;product=arginine repressor;protein_id=RJP77786.1;transl_table=11 PTQV01000099.1 Genbank gene 3755 5422 . + . ID=gene-C5O68_11780;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=C5O68_11780 PTQV01000099.1 Protein Homology CDS 3755 5422 . + 0 ID=cds-RJP77787.1;Parent=gene-C5O68_11780;Dbxref=NCBI_GP:RJP77787.1;Name=RJP77787.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446131.1;locus_tag=C5O68_11780;product=DNA repair protein RecN;protein_id=RJP77787.1;transl_table=11 PTQV01000099.1 Genbank gene 5424 6152 . + . ID=gene-C5O68_11785;Name=C5O68_11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11785 PTQV01000099.1 Protein Homology CDS 5424 6152 . + 0 ID=cds-RJP77788.1;Parent=gene-C5O68_11785;Dbxref=NCBI_GP:RJP77788.1;Name=RJP77788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446132.1;locus_tag=C5O68_11785;product=serine/threonine protein phosphatase;protein_id=RJP77788.1;transl_table=11 PTQV01000099.1 Genbank gene 6231 8054 . + . ID=gene-C5O68_11790;Name=C5O68_11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11790 PTQV01000099.1 Protein Homology CDS 6231 8054 . + 0 ID=cds-RJP77789.1;Parent=gene-C5O68_11790;Dbxref=NCBI_GP:RJP77789.1;Name=RJP77789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446133.1;locus_tag=C5O68_11790;product=elongation factor 4;protein_id=RJP77789.1;transl_table=11 PTQV01000099.1 Genbank gene 8428 8925 . + . ID=gene-C5O68_11795;Name=C5O68_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11795 PTQV01000099.1 Protein Homology CDS 8428 8925 . + 0 ID=cds-RJP77790.1;Parent=gene-C5O68_11795;Dbxref=NCBI_GP:RJP77790.1;Name=RJP77790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446134.1;locus_tag=C5O68_11795;product=PTS fructose transporter subunit IIA;protein_id=RJP77790.1;transl_table=11 PTQV01000099.1 Genbank gene 8964 9269 . + . ID=gene-C5O68_11800;Name=C5O68_11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11800 PTQV01000099.1 Protein Homology CDS 8964 9269 . + 0 ID=cds-RJP77791.1;Parent=gene-C5O68_11800;Dbxref=NCBI_GP:RJP77791.1;Name=RJP77791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003446135.1;locus_tag=C5O68_11800;product=PTS fructose transporter subunit IIB;protein_id=RJP77791.1;transl_table=11 PTQV01000099.1 Genbank gene 9318 10793 . + . ID=gene-C5O68_11805;Name=C5O68_11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11805 PTQV01000099.1 Protein Homology CDS 9318 10793 . + 0 ID=cds-RJP77792.1;Parent=gene-C5O68_11805;Dbxref=NCBI_GP:RJP77792.1;Name=RJP77792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_358158.1;locus_tag=C5O68_11805;product=PTS galactitol transporter subunit IIC;protein_id=RJP77792.1;transl_table=11 PTQV01000099.1 Genbank gene 10819 10900 . + . ID=gene-C5O68_11810;Name=C5O68_11810;end_range=10900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_11810;partial=true PTQV01000099.1 Protein Homology CDS 10819 10900 . + 0 ID=cds-RJP77793.1;Parent=gene-C5O68_11810;Dbxref=NCBI_GP:RJP77793.1;Name=RJP77793.1;end_range=10900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000694305.1;locus_tag=C5O68_11810;partial=true;product=chlorohydrolase;protein_id=RJP77793.1;transl_table=11 ##sequence-region PTQV01000009.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=257758 PTQV01000009.1 Genbank region 1 405 . + . ID=PTQV01000009.1:1..405;Dbxref=taxon:257758;collection-date=2009;country=Spain;gbkey=Src;mol_type=genomic DNA;nat-host=Homo sapiens;strain=Spain939 PTQV01000009.1 Genbank gene 1 405 . + . ID=gene-C5O68_01655;Name=C5O68_01655;end_range=405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=C5O68_01655;partial=true;start_range=.,1 PTQV01000009.1 Protein Homology CDS 1 405 . + 2 ID=cds-RJP84025.1;Parent=gene-C5O68_01655;Dbxref=NCBI_GP:RJP84025.1;Name=RJP84025.1;end_range=405,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13358.4;locus_tag=C5O68_01655;partial=true;product=IS630 family transposase;protein_id=RJP84025.1;start_range=.,1;transl_table=11 ###