##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM398916v1 #!genome-build-accession NCBI_Assembly:GCA_003989165.1 #!annotation-date 10/03/2018 22:04:48 #!annotation-source NCBI ##sequence-region RBME01000100.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000100.1 Genbank region 1 937 . + . ID=RBME01000100.1:1..937;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000100.1 Genbank gene 1 650 . - . ID=gene-D8M40_11910;Name=D8M40_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11910;partial=true;start_range=.,1 RBME01000100.1 Protein Homology CDS 1 650 . - 0 ID=cds-RUP85370.1;Parent=gene-D8M40_11910;Dbxref=NCBI_GP:RUP85370.1;Name=RUP85370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016971253.1;locus_tag=D8M40_11910;partial=true;product=PhzF family phenazine biosynthesis protein;protein_id=RUP85370.1;start_range=.,1;transl_table=11 RBME01000100.1 Genbank gene 745 937 . - . ID=gene-D8M40_11915;Name=D8M40_11915;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11915;partial=true RBME01000100.1 Protein Homology CDS 745 937 . - 1 ID=cds-RUP85371.1;Parent=gene-D8M40_11915;Dbxref=NCBI_GP:RUP85371.1;Name=RUP85371.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016971252.1;locus_tag=D8M40_11915;partial=true;product=EamA family transporter;protein_id=RUP85371.1;transl_table=11 ##sequence-region RBME01000101.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000101.1 Genbank region 1 933 . + . ID=RBME01000101.1:1..933;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000101.1 Genbank gene 1 749 . - . ID=gene-D8M40_11920;Name=D8M40_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11920;partial=true;start_range=.,1 RBME01000101.1 Protein Homology CDS 1 749 . - 0 ID=cds-RUP85367.1;Parent=gene-D8M40_11920;Dbxref=NCBI_GP:RUP85367.1;Name=RUP85367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002552499.1;locus_tag=D8M40_11920;partial=true;product=CBS domain-containing protein;protein_id=RUP85367.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000102.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000102.1 Genbank region 1 932 . + . ID=RBME01000102.1:1..932;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000102.1 Genbank gene 51 905 . - . ID=gene-D8M40_11925;Name=D8M40_11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11925 RBME01000102.1 Protein Homology CDS 51 905 . - 0 ID=cds-RUP85364.1;Parent=gene-D8M40_11925;Dbxref=NCBI_GP:RUP85364.1;Name=RUP85364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020301706.1;locus_tag=D8M40_11925;product=alpha/beta fold hydrolase;protein_id=RUP85364.1;transl_table=11 ##sequence-region RBME01000103.1 1 916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000103.1 Genbank region 1 916 . + . ID=RBME01000103.1:1..916;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000103.1 Genbank pseudogene 56 562 . - . ID=gene-D8M40_11930;Name=D8M40_11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11930;pseudo=true RBME01000103.1 Protein Homology CDS 56 562 . - 0 ID=cds-D8M40_11930;Parent=gene-D8M40_11930;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003188735.1;locus_tag=D8M40_11930;product=right-handed parallel beta-helix repeat-containing protein;pseudo=true;transl_table=11 RBME01000103.1 Genbank gene 562 916 . - . ID=gene-D8M40_11935;Name=D8M40_11935;end_range=916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11935;partial=true RBME01000103.1 Protein Homology CDS 562 916 . - 1 ID=cds-RUP85362.1;Parent=gene-D8M40_11935;Dbxref=NCBI_GP:RUP85362.1;Name=RUP85362.1;end_range=916,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003221858.1;locus_tag=D8M40_11935;partial=true;product=transcriptional regulator;protein_id=RUP85362.1;transl_table=11 ##sequence-region RBME01000104.1 1 910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000104.1 Genbank region 1 910 . + . ID=RBME01000104.1:1..910;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000104.1 Genbank gene 1 910 . + . ID=gene-D8M40_11940;Name=D8M40_11940;end_range=910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11940;partial=true;start_range=.,1 RBME01000104.1 Protein Homology CDS 1 910 . + 0 ID=cds-RUP85359.1;Parent=gene-D8M40_11940;Dbxref=NCBI_GP:RUP85359.1;Name=RUP85359.1;end_range=910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008012583.1;locus_tag=D8M40_11940;partial=true;product=sulfonate ABC transporter substrate-binding protein;protein_id=RUP85359.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000105.1 1 902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000105.1 Genbank region 1 902 . + . ID=RBME01000105.1:1..902;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000105.1 Genbank gene 1 902 . - . ID=gene-D8M40_11945;Name=ribB;end_range=902,.;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=D8M40_11945;partial=true;start_range=.,1 RBME01000105.1 Protein Homology CDS 1 902 . - 0 ID=cds-RUP85356.1;Parent=gene-D8M40_11945;Dbxref=NCBI_GP:RUP85356.1;Name=RUP85356.1;end_range=902,.;gbkey=CDS;gene=ribB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019581380.1;locus_tag=D8M40_11945;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=RUP85356.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000106.1 1 895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000106.1 Genbank region 1 895 . + . ID=RBME01000106.1:1..895;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000106.1 Genbank gene 1 686 . - . ID=gene-D8M40_11950;Name=D8M40_11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11950;partial=true;start_range=.,1 RBME01000106.1 Protein Homology CDS 1 686 . - 0 ID=cds-RUP85353.1;Parent=gene-D8M40_11950;Dbxref=NCBI_GP:RUP85353.1;Name=RUP85353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012312131.1;locus_tag=D8M40_11950;partial=true;product=exodeoxyribonuclease III;protein_id=RUP85353.1;start_range=.,1;transl_table=11 RBME01000106.1 Genbank gene 769 895 . + . ID=gene-D8M40_11955;Name=pyrE;end_range=895,.;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=D8M40_11955;partial=true RBME01000106.1 Protein Homology CDS 769 895 . + 0 ID=cds-RUP85354.1;Parent=gene-D8M40_11955;Dbxref=NCBI_GP:RUP85354.1;Name=RUP85354.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;end_range=895,.;gbkey=CDS;gene=pyrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_789939.1;locus_tag=D8M40_11955;partial=true;product=orotate phosphoribosyltransferase;protein_id=RUP85354.1;transl_table=11 ##sequence-region RBME01000107.1 1 894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000107.1 Genbank region 1 894 . + . ID=RBME01000107.1:1..894;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000107.1 Genbank gene 1 268 . + . ID=gene-D8M40_11960;Name=D8M40_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11960;partial=true;start_range=.,1 RBME01000107.1 Protein Homology CDS 1 268 . + 1 ID=cds-RUP85349.1;Parent=gene-D8M40_11960;Dbxref=NCBI_GP:RUP85349.1;Name=RUP85349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017132813.1;locus_tag=D8M40_11960;partial=true;product=DUF3015 domain-containing protein;protein_id=RUP85349.1;start_range=.,1;transl_table=11 RBME01000107.1 Genbank gene 360 894 . + . ID=gene-D8M40_11965;Name=D8M40_11965;end_range=894,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11965;partial=true RBME01000107.1 Protein Homology CDS 360 894 . + 0 ID=cds-RUP85350.1;Parent=gene-D8M40_11965;Dbxref=NCBI_GP:RUP85350.1;Name=RUP85350.1;end_range=894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007909796.1;locus_tag=D8M40_11965;partial=true;product=DUF4105 domain-containing protein;protein_id=RUP85350.1;transl_table=11 ##sequence-region RBME01000108.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000108.1 Genbank region 1 892 . + . ID=RBME01000108.1:1..892;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000108.1 Genbank gene 1 580 . - . ID=gene-D8M40_11970;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=D8M40_11970;partial=true;start_range=.,1 RBME01000108.1 Protein Homology CDS 1 580 . - 0 ID=cds-RUP85346.1;Parent=gene-D8M40_11970;Dbxref=NCBI_GP:RUP85346.1;Name=RUP85346.1;gbkey=CDS;gene=cynR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017256290.1;locus_tag=D8M40_11970;partial=true;product=transcriptional regulator CynR;protein_id=RUP85346.1;start_range=.,1;transl_table=11 RBME01000108.1 Genbank gene 692 892 . + . ID=gene-D8M40_11975;Name=D8M40_11975;end_range=892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11975;partial=true RBME01000108.1 Protein Homology CDS 692 892 . + 0 ID=cds-RUP85347.1;Parent=gene-D8M40_11975;Dbxref=NCBI_GP:RUP85347.1;Name=RUP85347.1;end_range=892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356406.1;locus_tag=D8M40_11975;partial=true;product=carbonic anhydrase;protein_id=RUP85347.1;transl_table=11 ##sequence-region RBME01000109.1 1 891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000109.1 Genbank region 1 891 . + . ID=RBME01000109.1:1..891;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000109.1 Genbank gene 1 891 . - . ID=gene-D8M40_11980;Name=D8M40_11980;end_range=891,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11980;partial=true;start_range=.,1 RBME01000109.1 Protein Homology CDS 1 891 . - 0 ID=cds-RUP85344.1;Parent=gene-D8M40_11980;Dbxref=NCBI_GP:RUP85344.1;Name=RUP85344.1;end_range=891,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019097921.1;locus_tag=D8M40_11980;partial=true;product=class I SAM-dependent rRNA methyltransferase;protein_id=RUP85344.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000010.1 1 96853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000010.1 Genbank region 1 96853 . + . ID=RBME01000010.1:1..96853;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000010.1 Genbank gene 1 113 . - . ID=gene-D8M40_07900;Name=D8M40_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07900;partial=true;start_range=.,1 RBME01000010.1 Protein Homology CDS 1 113 . - 0 ID=cds-RUP88148.1;Parent=gene-D8M40_07900;Dbxref=NCBI_GP:RUP88148.1;Name=RUP88148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_07900;partial=true;product=helix-turn-helix domain-containing protein;protein_id=RUP88148.1;start_range=.,1;transl_table=11 RBME01000010.1 Genbank gene 274 1386 . + . ID=gene-D8M40_07905;Name=D8M40_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07905 RBME01000010.1 Protein Homology CDS 274 1386 . + 0 ID=cds-RUP88149.1;Parent=gene-D8M40_07905;Dbxref=NCBI_GP:RUP88149.1;Name=RUP88149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121351.1;locus_tag=D8M40_07905;product=aldo/keto reductase;protein_id=RUP88149.1;transl_table=11 RBME01000010.1 Genbank gene 1404 2597 . - . ID=gene-D8M40_07910;Name=D8M40_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07910 RBME01000010.1 Protein Homology CDS 1404 2597 . - 0 ID=cds-RUP88150.1;Parent=gene-D8M40_07910;Dbxref=NCBI_GP:RUP88150.1;Name=RUP88150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121350.1;locus_tag=D8M40_07910;product=o-succinylbenzoate--CoA ligase;protein_id=RUP88150.1;transl_table=11 RBME01000010.1 Genbank gene 2683 3690 . - . ID=gene-D8M40_07915;Name=D8M40_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07915 RBME01000010.1 Protein Homology CDS 2683 3690 . - 0 ID=cds-RUP88151.1;Parent=gene-D8M40_07915;Dbxref=NCBI_GP:RUP88151.1;Name=RUP88151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014835898.1;locus_tag=D8M40_07915;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=RUP88151.1;transl_table=11 RBME01000010.1 Genbank gene 3814 4848 . + . ID=gene-D8M40_07920;Name=D8M40_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07920 RBME01000010.1 Protein Homology CDS 3814 4848 . + 0 ID=cds-RUP88236.1;Parent=gene-D8M40_07920;Dbxref=NCBI_GP:RUP88236.1;Name=RUP88236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399893.1;locus_tag=D8M40_07920;product=O-succinylbenzoate synthase;protein_id=RUP88236.1;transl_table=11 RBME01000010.1 Genbank gene 4975 7512 . + . ID=gene-D8M40_07925;Name=D8M40_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07925 RBME01000010.1 Protein Homology CDS 4975 7512 . + 0 ID=cds-RUP88237.1;Parent=gene-D8M40_07925;Dbxref=NCBI_GP:RUP88237.1;Name=RUP88237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399896.1;locus_tag=D8M40_07925;product=ATP-binding cassette domain-containing protein;protein_id=RUP88237.1;transl_table=11 RBME01000010.1 Genbank gene 7573 8415 . + . ID=gene-D8M40_07930;Name=D8M40_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07930 RBME01000010.1 GeneMarkS+ CDS 7573 8415 . + 0 ID=cds-RUP88152.1;Parent=gene-D8M40_07930;Dbxref=NCBI_GP:RUP88152.1;Name=RUP88152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07930;product=hypothetical protein;protein_id=RUP88152.1;transl_table=11 RBME01000010.1 Genbank gene 8533 10266 . + . ID=gene-D8M40_07935;Name=D8M40_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07935 RBME01000010.1 Protein Homology CDS 8533 10266 . + 0 ID=cds-RUP88153.1;Parent=gene-D8M40_07935;Dbxref=NCBI_GP:RUP88153.1;Name=RUP88153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121345.1;locus_tag=D8M40_07935;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=RUP88153.1;transl_table=11 RBME01000010.1 Genbank gene 10279 10782 . + . ID=gene-D8M40_07940;Name=D8M40_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07940 RBME01000010.1 Protein Homology CDS 10279 10782 . + 0 ID=cds-RUP88154.1;Parent=gene-D8M40_07940;Dbxref=NCBI_GP:RUP88154.1;Name=RUP88154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021337.1;locus_tag=D8M40_07940;product=DUF3592 domain-containing protein;protein_id=RUP88154.1;transl_table=11 RBME01000010.1 Genbank gene 10789 12051 . + . ID=gene-D8M40_07945;Name=D8M40_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07945 RBME01000010.1 Protein Homology CDS 10789 12051 . + 0 ID=cds-RUP88155.1;Parent=gene-D8M40_07945;Dbxref=NCBI_GP:RUP88155.1;Name=RUP88155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121343.1;locus_tag=D8M40_07945;product=glycosyltransferase family 1 protein;protein_id=RUP88155.1;transl_table=11 RBME01000010.1 Genbank gene 12061 12861 . + . ID=gene-D8M40_07950;Name=D8M40_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07950 RBME01000010.1 Protein Homology CDS 12061 12861 . + 0 ID=cds-RUP88156.1;Parent=gene-D8M40_07950;Dbxref=NCBI_GP:RUP88156.1;Name=RUP88156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121342.1;locus_tag=D8M40_07950;product=demethylmenaquinone methyltransferase;protein_id=RUP88156.1;transl_table=11 RBME01000010.1 Genbank gene 13053 13364 . + . ID=gene-D8M40_07955;Name=D8M40_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07955 RBME01000010.1 GeneMarkS+ CDS 13053 13364 . + 0 ID=cds-RUP88157.1;Parent=gene-D8M40_07955;Dbxref=NCBI_GP:RUP88157.1;Name=RUP88157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07955;product=hypothetical protein;protein_id=RUP88157.1;transl_table=11 RBME01000010.1 Genbank gene 13473 14822 . - . ID=gene-D8M40_07960;Name=D8M40_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07960 RBME01000010.1 Protein Homology CDS 13473 14822 . - 0 ID=cds-RUP88238.1;Parent=gene-D8M40_07960;Dbxref=NCBI_GP:RUP88238.1;Name=RUP88238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581589.1;locus_tag=D8M40_07960;product=geranylgeranyl reductase family protein;protein_id=RUP88238.1;transl_table=11 RBME01000010.1 Genbank gene 15017 16033 . + . ID=gene-D8M40_07965;Name=D8M40_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07965 RBME01000010.1 Protein Homology CDS 15017 16033 . + 0 ID=cds-RUP88158.1;Parent=gene-D8M40_07965;Dbxref=NCBI_GP:RUP88158.1;Name=RUP88158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327943.1;locus_tag=D8M40_07965;product=polyprenyl synthetase family protein;protein_id=RUP88158.1;transl_table=11 RBME01000010.1 Genbank gene 16171 16252 . + . ID=gene-D8M40_07970;Name=D8M40_07970;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07970 RBME01000010.1 tRNAscan-SE tRNA 16171 16252 . + . ID=rna-D8M40_07970;Parent=gene-D8M40_07970;anticodon=(pos:16205..16207);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07970;product=tRNA-Tyr RBME01000010.1 tRNAscan-SE exon 16171 16252 . + . ID=exon-D8M40_07970-1;Parent=rna-D8M40_07970;anticodon=(pos:16205..16207);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07970;product=tRNA-Tyr RBME01000010.1 Genbank gene 16493 17569 . - . ID=gene-D8M40_07975;Name=D8M40_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07975 RBME01000010.1 Protein Homology CDS 16493 17569 . - 0 ID=cds-RUP88159.1;Parent=gene-D8M40_07975;Dbxref=NCBI_GP:RUP88159.1;Name=RUP88159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325797.1;locus_tag=D8M40_07975;product=LysR family transcriptional regulator;protein_id=RUP88159.1;transl_table=11 RBME01000010.1 Genbank gene 17568 18554 . + . ID=gene-D8M40_07980;Name=D8M40_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07980 RBME01000010.1 Protein Homology CDS 17568 18554 . + 0 ID=cds-RUP88160.1;Parent=gene-D8M40_07980;Dbxref=NCBI_GP:RUP88160.1;Name=RUP88160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121337.1;locus_tag=D8M40_07980;product=tellurite resistance protein;protein_id=RUP88160.1;transl_table=11 RBME01000010.1 Genbank gene 18876 18948 . + . ID=gene-D8M40_07985;Name=D8M40_07985;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07985 RBME01000010.1 tRNAscan-SE tRNA 18876 18948 . + . ID=rna-D8M40_07985;Parent=gene-D8M40_07985;anticodon=(pos:18909..18911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07985;product=tRNA-Thr RBME01000010.1 tRNAscan-SE exon 18876 18948 . + . ID=exon-D8M40_07985-1;Parent=rna-D8M40_07985;anticodon=(pos:18909..18911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07985;product=tRNA-Thr RBME01000010.1 Genbank gene 18992 19063 . + . ID=gene-D8M40_07990;Name=D8M40_07990;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07990 RBME01000010.1 tRNAscan-SE tRNA 18992 19063 . + . ID=rna-D8M40_07990;Parent=gene-D8M40_07990;anticodon=(pos:19024..19026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07990;product=tRNA-Met RBME01000010.1 tRNAscan-SE exon 18992 19063 . + . ID=exon-D8M40_07990-1;Parent=rna-D8M40_07990;anticodon=(pos:19024..19026);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07990;product=tRNA-Met RBME01000010.1 Genbank gene 19183 19258 . + . ID=gene-D8M40_07995;Name=D8M40_07995;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07995 RBME01000010.1 tRNAscan-SE tRNA 19183 19258 . + . ID=rna-D8M40_07995;Parent=gene-D8M40_07995;anticodon=(pos:19216..19218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07995;product=tRNA-Trp RBME01000010.1 tRNAscan-SE exon 19183 19258 . + . ID=exon-D8M40_07995-1;Parent=rna-D8M40_07995;anticodon=(pos:19216..19218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07995;product=tRNA-Trp RBME01000010.1 Genbank gene 19314 19646 . + . ID=gene-D8M40_08000;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=D8M40_08000 RBME01000010.1 Protein Homology CDS 19314 19646 . + 0 ID=cds-RUP88161.1;Parent=gene-D8M40_08000;Dbxref=NCBI_GP:RUP88161.1;Name=RUP88161.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189725.1;locus_tag=D8M40_08000;product=preprotein translocase subunit SecE;protein_id=RUP88161.1;transl_table=11 RBME01000010.1 Genbank gene 19768 20703 . + . ID=gene-D8M40_08005;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=D8M40_08005 RBME01000010.1 Protein Homology CDS 19768 20703 . + 0 ID=cds-RUP88162.1;Parent=gene-D8M40_08005;Dbxref=NCBI_GP:RUP88162.1;Name=RUP88162.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121335.1;locus_tag=D8M40_08005;product=transcription termination/antitermination protein NusG;protein_id=RUP88162.1;transl_table=11 RBME01000010.1 Genbank gene 20893 21342 . + . ID=gene-D8M40_08010;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=D8M40_08010 RBME01000010.1 Protein Homology CDS 20893 21342 . + 0 ID=cds-RUP88163.1;Parent=gene-D8M40_08010;Dbxref=NCBI_GP:RUP88163.1;Name=RUP88163.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848036.1;locus_tag=D8M40_08010;product=50S ribosomal protein L11;protein_id=RUP88163.1;transl_table=11 RBME01000010.1 Genbank gene 21499 22209 . + . ID=gene-D8M40_08015;Name=D8M40_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08015 RBME01000010.1 Protein Homology CDS 21499 22209 . + 0 ID=cds-RUP88164.1;Parent=gene-D8M40_08015;Dbxref=NCBI_GP:RUP88164.1;Name=RUP88164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014302896.1;locus_tag=D8M40_08015;product=50S ribosomal protein L1;protein_id=RUP88164.1;transl_table=11 RBME01000010.1 Genbank gene 22439 22903 . + . ID=gene-D8M40_08020;Name=D8M40_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08020 RBME01000010.1 Protein Homology CDS 22439 22903 . + 0 ID=cds-RUP88165.1;Parent=gene-D8M40_08020;Dbxref=NCBI_GP:RUP88165.1;Name=RUP88165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121332.1;locus_tag=D8M40_08020;product=DUF454 domain-containing protein;protein_id=RUP88165.1;transl_table=11 RBME01000010.1 Genbank gene 22948 24501 . + . ID=gene-D8M40_08025;Name=D8M40_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08025 RBME01000010.1 Protein Homology CDS 22948 24501 . + 0 ID=cds-RUP88166.1;Parent=gene-D8M40_08025;Dbxref=NCBI_GP:RUP88166.1;Name=RUP88166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326258.1;locus_tag=D8M40_08025;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP88166.1;transl_table=11 RBME01000010.1 Genbank gene 24789 25310 . + . ID=gene-D8M40_08030;Name=D8M40_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08030 RBME01000010.1 Protein Homology CDS 24789 25310 . + 0 ID=cds-RUP88167.1;Parent=gene-D8M40_08030;Dbxref=NCBI_GP:RUP88167.1;Name=RUP88167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121330.1;locus_tag=D8M40_08030;product=50S ribosomal protein L10;protein_id=RUP88167.1;transl_table=11 RBME01000010.1 Genbank gene 25461 25847 . + . ID=gene-D8M40_08035;Name=D8M40_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08035 RBME01000010.1 Protein Homology CDS 25461 25847 . + 0 ID=cds-RUP88168.1;Parent=gene-D8M40_08035;Dbxref=NCBI_GP:RUP88168.1;Name=RUP88168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770269.1;locus_tag=D8M40_08035;product=50S ribosomal protein L7/L12;protein_id=RUP88168.1;transl_table=11 RBME01000010.1 Genbank gene 26154 26693 . + . ID=gene-D8M40_08040;Name=D8M40_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08040 RBME01000010.1 Protein Homology CDS 26154 26693 . + 0 ID=cds-RUP88169.1;Parent=gene-D8M40_08040;Dbxref=NCBI_GP:RUP88169.1;Name=RUP88169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121327.1;locus_tag=D8M40_08040;product=hypothetical protein;protein_id=RUP88169.1;transl_table=11 RBME01000010.1 Genbank gene 26788 27828 . + . ID=gene-D8M40_08045;Name=D8M40_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08045 RBME01000010.1 Protein Homology CDS 26788 27828 . + 0 ID=cds-RUP88170.1;Parent=gene-D8M40_08045;Dbxref=NCBI_GP:RUP88170.1;Name=RUP88170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11271.6;locus_tag=D8M40_08045;product=DUF3068 domain-containing protein;protein_id=RUP88170.1;transl_table=11 RBME01000010.1 Genbank gene 28102 31596 . + . ID=gene-D8M40_08050;Name=D8M40_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08050 RBME01000010.1 Protein Homology CDS 28102 31596 . + 0 ID=cds-RUP88171.1;Parent=gene-D8M40_08050;Dbxref=NCBI_GP:RUP88171.1;Name=RUP88171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322877.1;locus_tag=D8M40_08050;product=DNA-directed RNA polymerase subunit beta;protein_id=RUP88171.1;transl_table=11 RBME01000010.1 Genbank gene 31679 35674 . + . ID=gene-D8M40_08055;Name=D8M40_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08055 RBME01000010.1 Protein Homology CDS 31679 35674 . + 0 ID=cds-RUP88172.1;Parent=gene-D8M40_08055;Dbxref=NCBI_GP:RUP88172.1;Name=RUP88172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121324.1;locus_tag=D8M40_08055;product=DNA-directed RNA polymerase subunit beta';protein_id=RUP88172.1;transl_table=11 RBME01000010.1 Genbank gene 35999 36631 . + . ID=gene-D8M40_08060;Name=D8M40_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08060 RBME01000010.1 Protein Homology CDS 35999 36631 . + 0 ID=cds-RUP88173.1;Parent=gene-D8M40_08060;Dbxref=NCBI_GP:RUP88173.1;Name=RUP88173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276874.1;locus_tag=D8M40_08060;product=hypothetical protein;protein_id=RUP88173.1;transl_table=11 RBME01000010.1 Genbank gene 36672 38084 . + . ID=gene-D8M40_08065;Name=D8M40_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08065 RBME01000010.1 Protein Homology CDS 36672 38084 . + 0 ID=cds-RUP88174.1;Parent=gene-D8M40_08065;Dbxref=NCBI_GP:RUP88174.1;Name=RUP88174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121322.1;locus_tag=D8M40_08065;product=ABC transporter ATP-binding protein;protein_id=RUP88174.1;transl_table=11 RBME01000010.1 Genbank gene 38086 38871 . + . ID=gene-D8M40_08070;Name=D8M40_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08070 RBME01000010.1 Protein Homology CDS 38086 38871 . + 0 ID=cds-RUP88175.1;Parent=gene-D8M40_08070;Dbxref=NCBI_GP:RUP88175.1;Name=RUP88175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121321.1;locus_tag=D8M40_08070;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RUP88175.1;transl_table=11 RBME01000010.1 Genbank gene 38968 40551 . - . ID=gene-D8M40_08075;Name=D8M40_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08075 RBME01000010.1 Protein Homology CDS 38968 40551 . - 0 ID=cds-RUP88176.1;Parent=gene-D8M40_08075;Dbxref=NCBI_GP:RUP88176.1;Name=RUP88176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01522.19;locus_tag=D8M40_08075;product=hypothetical protein;protein_id=RUP88176.1;transl_table=11 RBME01000010.1 Genbank gene 40901 41269 . + . ID=gene-D8M40_08080;Name=D8M40_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08080 RBME01000010.1 Protein Homology CDS 40901 41269 . + 0 ID=cds-RUP88177.1;Parent=gene-D8M40_08080;Dbxref=NCBI_GP:RUP88177.1;Name=RUP88177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297794.1;locus_tag=D8M40_08080;product=30S ribosomal protein S12;protein_id=RUP88177.1;transl_table=11 RBME01000010.1 Genbank gene 41276 41743 . + . ID=gene-D8M40_08085;Name=D8M40_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08085 RBME01000010.1 Protein Homology CDS 41276 41743 . + 0 ID=cds-RUP88178.1;Parent=gene-D8M40_08085;Dbxref=NCBI_GP:RUP88178.1;Name=RUP88178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458991.1;locus_tag=D8M40_08085;product=30S ribosomal protein S7;protein_id=RUP88178.1;transl_table=11 RBME01000010.1 Genbank gene 41979 44111 . + . ID=gene-D8M40_08090;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=D8M40_08090 RBME01000010.1 Protein Homology CDS 41979 44111 . + 0 ID=cds-RUP88179.1;Parent=gene-D8M40_08090;Dbxref=NCBI_GP:RUP88179.1;Name=RUP88179.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121317.1;locus_tag=D8M40_08090;product=elongation factor G;protein_id=RUP88179.1;transl_table=11 RBME01000010.1 Genbank gene 44556 45746 . + . ID=gene-D8M40_08095;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D8M40_08095 RBME01000010.1 Protein Homology CDS 44556 45746 . + 0 ID=cds-RUP88180.1;Parent=gene-D8M40_08095;Dbxref=NCBI_GP:RUP88180.1;Name=RUP88180.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189688.1;locus_tag=D8M40_08095;product=elongation factor Tu;protein_id=RUP88180.1;transl_table=11 RBME01000010.1 Genbank gene 46892 47233 . + . ID=gene-D8M40_08100;Name=D8M40_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08100 RBME01000010.1 Protein Homology CDS 46892 47233 . + 0 ID=cds-RUP88239.1;Parent=gene-D8M40_08100;Dbxref=NCBI_GP:RUP88239.1;Name=RUP88239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360773.1;locus_tag=D8M40_08100;product=LppP/LprE family lipoprotein;protein_id=RUP88239.1;transl_table=11 RBME01000010.1 Genbank gene 47247 48512 . - . ID=gene-D8M40_08105;Name=D8M40_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08105 RBME01000010.1 Protein Homology CDS 47247 48512 . - 0 ID=cds-RUP88181.1;Parent=gene-D8M40_08105;Dbxref=NCBI_GP:RUP88181.1;Name=RUP88181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121315.1;locus_tag=D8M40_08105;product=cation:proton antiporter;protein_id=RUP88181.1;transl_table=11 RBME01000010.1 Genbank gene 48620 49183 . - . ID=gene-D8M40_08110;Name=D8M40_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08110 RBME01000010.1 GeneMarkS+ CDS 48620 49183 . - 0 ID=cds-RUP88182.1;Parent=gene-D8M40_08110;Dbxref=NCBI_GP:RUP88182.1;Name=RUP88182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08110;product=alkaline shock response membrane anchor protein AmaP;protein_id=RUP88182.1;transl_table=11 RBME01000010.1 Genbank gene 49180 49737 . - . ID=gene-D8M40_08115;Name=D8M40_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08115 RBME01000010.1 Protein Homology CDS 49180 49737 . - 0 ID=cds-RUP88183.1;Parent=gene-D8M40_08115;Dbxref=NCBI_GP:RUP88183.1;Name=RUP88183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121313.1;locus_tag=D8M40_08115;product=hypothetical protein;protein_id=RUP88183.1;transl_table=11 RBME01000010.1 Genbank gene 49730 51151 . - . ID=gene-D8M40_08120;Name=D8M40_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08120 RBME01000010.1 GeneMarkS+ CDS 49730 51151 . - 0 ID=cds-RUP88184.1;Parent=gene-D8M40_08120;Dbxref=NCBI_GP:RUP88184.1;Name=RUP88184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08120;product=hypothetical protein;protein_id=RUP88184.1;transl_table=11 RBME01000010.1 Genbank gene 51151 51330 . - . ID=gene-D8M40_08125;Name=D8M40_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08125 RBME01000010.1 Protein Homology CDS 51151 51330 . - 0 ID=cds-RUP88240.1;Parent=gene-D8M40_08125;Dbxref=NCBI_GP:RUP88240.1;Name=RUP88240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019665488.1;locus_tag=D8M40_08125;product=DUF2273 domain-containing protein;protein_id=RUP88240.1;transl_table=11 RBME01000010.1 Genbank gene 51363 51701 . - . ID=gene-D8M40_08130;Name=D8M40_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08130 RBME01000010.1 Protein Homology CDS 51363 51701 . - 0 ID=cds-RUP88185.1;Parent=gene-D8M40_08130;Dbxref=NCBI_GP:RUP88185.1;Name=RUP88185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276897.1;locus_tag=D8M40_08130;product=hypothetical protein;protein_id=RUP88185.1;transl_table=11 RBME01000010.1 Genbank gene 51704 52180 . - . ID=gene-D8M40_08135;Name=D8M40_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08135 RBME01000010.1 Protein Homology CDS 51704 52180 . - 0 ID=cds-RUP88186.1;Parent=gene-D8M40_08135;Dbxref=NCBI_GP:RUP88186.1;Name=RUP88186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121309.1;locus_tag=D8M40_08135;product=Asp23/Gls24 family envelope stress response protein;protein_id=RUP88186.1;transl_table=11 RBME01000010.1 Genbank gene 52902 53207 . + . ID=gene-D8M40_08140;Name=D8M40_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08140 RBME01000010.1 Protein Homology CDS 52902 53207 . + 0 ID=cds-RUP88187.1;Parent=gene-D8M40_08140;Dbxref=NCBI_GP:RUP88187.1;Name=RUP88187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=D8M40_08140;product=30S ribosomal protein S10;protein_id=RUP88187.1;transl_table=11 RBME01000010.1 Genbank gene 53270 53920 . + . ID=gene-D8M40_08145;Name=D8M40_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08145 RBME01000010.1 Protein Homology CDS 53270 53920 . + 0 ID=cds-RUP88188.1;Parent=gene-D8M40_08145;Dbxref=NCBI_GP:RUP88188.1;Name=RUP88188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189651.1;locus_tag=D8M40_08145;product=50S ribosomal protein L3;protein_id=RUP88188.1;transl_table=11 RBME01000010.1 Genbank gene 53923 54582 . + . ID=gene-D8M40_08150;Name=D8M40_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08150 RBME01000010.1 Protein Homology CDS 53923 54582 . + 0 ID=cds-RUP88189.1;Parent=gene-D8M40_08150;Dbxref=NCBI_GP:RUP88189.1;Name=RUP88189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650389.1;locus_tag=D8M40_08150;product=50S ribosomal protein L4;protein_id=RUP88189.1;transl_table=11 RBME01000010.1 Genbank gene 54584 54886 . + . ID=gene-D8M40_08155;Name=D8M40_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08155 RBME01000010.1 Protein Homology CDS 54584 54886 . + 0 ID=cds-RUP88190.1;Parent=gene-D8M40_08155;Dbxref=NCBI_GP:RUP88190.1;Name=RUP88190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340299.1;locus_tag=D8M40_08155;product=50S ribosomal protein L23;protein_id=RUP88190.1;transl_table=11 RBME01000010.1 Genbank gene 54911 55747 . + . ID=gene-D8M40_08160;Name=D8M40_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08160 RBME01000010.1 Protein Homology CDS 54911 55747 . + 0 ID=cds-RUP88191.1;Parent=gene-D8M40_08160;Dbxref=NCBI_GP:RUP88191.1;Name=RUP88191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189648.1;locus_tag=D8M40_08160;product=50S ribosomal protein L2;protein_id=RUP88191.1;transl_table=11 RBME01000010.1 Genbank gene 55764 56039 . + . ID=gene-D8M40_08165;Name=D8M40_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08165 RBME01000010.1 Protein Homology CDS 55764 56039 . + 0 ID=cds-RUP88192.1;Parent=gene-D8M40_08165;Dbxref=NCBI_GP:RUP88192.1;Name=RUP88192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839436.1;locus_tag=D8M40_08165;product=30S ribosomal protein S19;protein_id=RUP88192.1;transl_table=11 RBME01000010.1 Genbank gene 56043 56405 . + . ID=gene-D8M40_08170;Name=D8M40_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08170 RBME01000010.1 Protein Homology CDS 56043 56405 . + 0 ID=cds-RUP88193.1;Parent=gene-D8M40_08170;Dbxref=NCBI_GP:RUP88193.1;Name=RUP88193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118340.1;locus_tag=D8M40_08170;product=50S ribosomal protein L22;protein_id=RUP88193.1;transl_table=11 RBME01000010.1 Genbank gene 56406 57143 . + . ID=gene-D8M40_08175;Name=D8M40_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08175 RBME01000010.1 Protein Homology CDS 56406 57143 . + 0 ID=cds-RUP88194.1;Parent=gene-D8M40_08175;Dbxref=NCBI_GP:RUP88194.1;Name=RUP88194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599754.1;locus_tag=D8M40_08175;product=30S ribosomal protein S3;protein_id=RUP88194.1;transl_table=11 RBME01000010.1 Genbank gene 57147 57563 . + . ID=gene-D8M40_08180;Name=D8M40_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08180 RBME01000010.1 Protein Homology CDS 57147 57563 . + 0 ID=cds-RUP88195.1;Parent=gene-D8M40_08180;Dbxref=NCBI_GP:RUP88195.1;Name=RUP88195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599755.1;locus_tag=D8M40_08180;product=50S ribosomal protein L16;protein_id=RUP88195.1;transl_table=11 RBME01000010.1 Genbank gene 57563 57793 . + . ID=gene-D8M40_08185;Name=D8M40_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08185 RBME01000010.1 Protein Homology CDS 57563 57793 . + 0 ID=cds-RUP88196.1;Parent=gene-D8M40_08185;Dbxref=NCBI_GP:RUP88196.1;Name=RUP88196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599756.1;locus_tag=D8M40_08185;product=50S ribosomal protein L29;protein_id=RUP88196.1;transl_table=11 RBME01000010.1 Genbank gene 57796 58104 . + . ID=gene-D8M40_08190;Name=D8M40_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08190 RBME01000010.1 Protein Homology CDS 57796 58104 . + 0 ID=cds-RUP88197.1;Parent=gene-D8M40_08190;Dbxref=NCBI_GP:RUP88197.1;Name=RUP88197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322841.1;locus_tag=D8M40_08190;product=30S ribosomal protein S17;protein_id=RUP88197.1;transl_table=11 RBME01000010.1 Genbank gene 58277 59251 . + . ID=gene-D8M40_08195;Name=D8M40_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08195 RBME01000010.1 Protein Homology CDS 58277 59251 . + 0 ID=cds-RUP88198.1;Parent=gene-D8M40_08195;Dbxref=NCBI_GP:RUP88198.1;Name=RUP88198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360791.1;locus_tag=D8M40_08195;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP88198.1;transl_table=11 RBME01000010.1 Genbank gene 59371 60177 . - . ID=gene-D8M40_08200;Name=D8M40_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08200 RBME01000010.1 Protein Homology CDS 59371 60177 . - 0 ID=cds-RUP88199.1;Parent=gene-D8M40_08200;Dbxref=NCBI_GP:RUP88199.1;Name=RUP88199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121295.1;locus_tag=D8M40_08200;product=ABC transporter ATP-binding protein;protein_id=RUP88199.1;transl_table=11 RBME01000010.1 Genbank gene 60339 61457 . - . ID=gene-D8M40_08205;Name=D8M40_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08205 RBME01000010.1 Protein Homology CDS 60339 61457 . - 0 ID=cds-RUP88200.1;Parent=gene-D8M40_08205;Dbxref=NCBI_GP:RUP88200.1;Name=RUP88200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121294.1;locus_tag=D8M40_08205;product=iron-enterobactin ABC transporter permease;protein_id=RUP88200.1;transl_table=11 RBME01000010.1 Genbank gene 61454 62476 . - . ID=gene-D8M40_08210;Name=D8M40_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08210 RBME01000010.1 Protein Homology CDS 61454 62476 . - 0 ID=cds-RUP88201.1;Parent=gene-D8M40_08210;Dbxref=NCBI_GP:RUP88201.1;Name=RUP88201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121293.1;locus_tag=D8M40_08210;product=iron ABC transporter permease;protein_id=RUP88201.1;transl_table=11 RBME01000010.1 Genbank gene 62937 63335 . + . ID=gene-D8M40_08215;Name=D8M40_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08215 RBME01000010.1 Protein Homology CDS 62937 63335 . + 0 ID=cds-RUP88202.1;Parent=gene-D8M40_08215;Dbxref=NCBI_GP:RUP88202.1;Name=RUP88202.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07687.12;locus_tag=D8M40_08215;product=hypothetical protein;protein_id=RUP88202.1;transl_table=11 RBME01000010.1 Genbank gene 63725 64096 . + . ID=gene-D8M40_08220;Name=D8M40_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08220 RBME01000010.1 Protein Homology CDS 63725 64096 . + 0 ID=cds-RUP88203.1;Parent=gene-D8M40_08220;Dbxref=NCBI_GP:RUP88203.1;Name=RUP88203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189586.1;locus_tag=D8M40_08220;product=50S ribosomal protein L14;protein_id=RUP88203.1;transl_table=11 RBME01000010.1 Genbank gene 64097 64411 . + . ID=gene-D8M40_08225;Name=D8M40_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08225 RBME01000010.1 Protein Homology CDS 64097 64411 . + 0 ID=cds-RUP88204.1;Parent=gene-D8M40_08225;Dbxref=NCBI_GP:RUP88204.1;Name=RUP88204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441932.1;locus_tag=D8M40_08225;product=50S ribosomal protein L24;protein_id=RUP88204.1;transl_table=11 RBME01000010.1 Genbank gene 64415 64966 . + . ID=gene-D8M40_08230;Name=D8M40_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08230 RBME01000010.1 Protein Homology CDS 64415 64966 . + 0 ID=cds-RUP88205.1;Parent=gene-D8M40_08230;Dbxref=NCBI_GP:RUP88205.1;Name=RUP88205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823239.1;locus_tag=D8M40_08230;product=50S ribosomal protein L5;protein_id=RUP88205.1;transl_table=11 RBME01000010.1 Genbank gene 65398 65907 . + . ID=gene-D8M40_08235;Name=D8M40_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08235 RBME01000010.1 Protein Homology CDS 65398 65907 . + 0 ID=cds-RUP88206.1;Parent=gene-D8M40_08235;Dbxref=NCBI_GP:RUP88206.1;Name=RUP88206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121287.1;locus_tag=D8M40_08235;product=hypothetical protein;protein_id=RUP88206.1;transl_table=11 RBME01000010.1 Genbank gene 66272 66667 . + . ID=gene-D8M40_08240;Name=D8M40_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08240 RBME01000010.1 Protein Homology CDS 66272 66667 . + 0 ID=cds-RUP88207.1;Parent=gene-D8M40_08240;Dbxref=NCBI_GP:RUP88207.1;Name=RUP88207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854344.1;locus_tag=D8M40_08240;product=30S ribosomal protein S8;protein_id=RUP88207.1;transl_table=11 RBME01000010.1 Genbank gene 66685 67221 . + . ID=gene-D8M40_08245;Name=D8M40_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08245 RBME01000010.1 Protein Homology CDS 66685 67221 . + 0 ID=cds-RUP88208.1;Parent=gene-D8M40_08245;Dbxref=NCBI_GP:RUP88208.1;Name=RUP88208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399953.1;locus_tag=D8M40_08245;product=50S ribosomal protein L6;protein_id=RUP88208.1;transl_table=11 RBME01000010.1 Genbank gene 67225 67620 . + . ID=gene-D8M40_08250;Name=D8M40_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08250 RBME01000010.1 Protein Homology CDS 67225 67620 . + 0 ID=cds-RUP88209.1;Parent=gene-D8M40_08250;Dbxref=NCBI_GP:RUP88209.1;Name=RUP88209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297757.1;locus_tag=D8M40_08250;product=50S ribosomal protein L18;protein_id=RUP88209.1;transl_table=11 RBME01000010.1 Genbank gene 67661 68275 . + . ID=gene-D8M40_08255;Name=D8M40_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08255 RBME01000010.1 Protein Homology CDS 67661 68275 . + 0 ID=cds-RUP88210.1;Parent=gene-D8M40_08255;Dbxref=NCBI_GP:RUP88210.1;Name=RUP88210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599779.1;locus_tag=D8M40_08255;product=30S ribosomal protein S5;protein_id=RUP88210.1;transl_table=11 RBME01000010.1 Genbank gene 68279 68464 . + . ID=gene-D8M40_08260;Name=D8M40_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08260 RBME01000010.1 Protein Homology CDS 68279 68464 . + 0 ID=cds-RUP88211.1;Parent=gene-D8M40_08260;Dbxref=NCBI_GP:RUP88211.1;Name=RUP88211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848313.1;locus_tag=D8M40_08260;product=50S ribosomal protein L30;protein_id=RUP88211.1;transl_table=11 RBME01000010.1 Genbank gene 68472 68921 . + . ID=gene-D8M40_08265;Name=D8M40_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08265 RBME01000010.1 Protein Homology CDS 68472 68921 . + 0 ID=cds-RUP88212.1;Parent=gene-D8M40_08265;Dbxref=NCBI_GP:RUP88212.1;Name=RUP88212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013889193.1;locus_tag=D8M40_08265;product=50S ribosomal protein L15;protein_id=RUP88212.1;transl_table=11 RBME01000010.1 Genbank gene 69290 70615 . + . ID=gene-D8M40_08270;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=D8M40_08270 RBME01000010.1 Protein Homology CDS 69290 70615 . + 0 ID=cds-RUP88213.1;Parent=gene-D8M40_08270;Dbxref=NCBI_GP:RUP88213.1;Name=RUP88213.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599793.1;locus_tag=D8M40_08270;product=preprotein translocase subunit SecY;protein_id=RUP88213.1;transl_table=11 RBME01000010.1 Genbank gene 70615 71160 . + . ID=gene-D8M40_08275;Name=D8M40_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08275 RBME01000010.1 Protein Homology CDS 70615 71160 . + 0 ID=cds-RUP88214.1;Parent=gene-D8M40_08275;Dbxref=NCBI_GP:RUP88214.1;Name=RUP88214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599794.1;locus_tag=D8M40_08275;product=adenylate kinase;protein_id=RUP88214.1;transl_table=11 RBME01000010.1 Genbank gene 71282 71983 . + . ID=gene-D8M40_08280;Name=D8M40_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08280 RBME01000010.1 Protein Homology CDS 71282 71983 . + 0 ID=cds-RUP88241.1;Parent=gene-D8M40_08280;Dbxref=NCBI_GP:RUP88241.1;Name=RUP88241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399972.1;locus_tag=D8M40_08280;product=murein L%2CD-transpeptidase;protein_id=RUP88241.1;transl_table=11 RBME01000010.1 Genbank gene 72332 72550 . + . ID=gene-D8M40_08285;Name=D8M40_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08285 RBME01000010.1 Protein Homology CDS 72332 72550 . + 0 ID=cds-RUP88215.1;Parent=gene-D8M40_08285;Dbxref=NCBI_GP:RUP88215.1;Name=RUP88215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599797.1;locus_tag=D8M40_08285;product=translation initiation factor IF-1;protein_id=RUP88215.1;transl_table=11 RBME01000010.1 Genbank gene 72767 73135 . + . ID=gene-D8M40_08290;Name=D8M40_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08290 RBME01000010.1 Protein Homology CDS 72767 73135 . + 0 ID=cds-RUP88216.1;Parent=gene-D8M40_08290;Dbxref=NCBI_GP:RUP88216.1;Name=RUP88216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441897.1;locus_tag=D8M40_08290;product=30S ribosomal protein S13;protein_id=RUP88216.1;transl_table=11 RBME01000010.1 Genbank gene 73139 73540 . + . ID=gene-D8M40_08295;Name=D8M40_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08295 RBME01000010.1 Protein Homology CDS 73139 73540 . + 0 ID=cds-RUP88217.1;Parent=gene-D8M40_08295;Dbxref=NCBI_GP:RUP88217.1;Name=RUP88217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011075047.1;locus_tag=D8M40_08295;product=30S ribosomal protein S11;protein_id=RUP88217.1;transl_table=11 RBME01000010.1 Genbank gene 73562 74167 . + . ID=gene-D8M40_08300;Name=D8M40_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08300 RBME01000010.1 Protein Homology CDS 73562 74167 . + 0 ID=cds-RUP88218.1;Parent=gene-D8M40_08300;Dbxref=NCBI_GP:RUP88218.1;Name=RUP88218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010119835.1;locus_tag=D8M40_08300;product=30S ribosomal protein S4;protein_id=RUP88218.1;transl_table=11 RBME01000010.1 Genbank gene 74249 75256 . + . ID=gene-D8M40_08305;Name=D8M40_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08305 RBME01000010.1 Protein Homology CDS 74249 75256 . + 0 ID=cds-RUP88219.1;Parent=gene-D8M40_08305;Dbxref=NCBI_GP:RUP88219.1;Name=RUP88219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189530.1;locus_tag=D8M40_08305;product=DNA-directed RNA polymerase subunit alpha;protein_id=RUP88219.1;transl_table=11 RBME01000010.1 Genbank gene 75371 75868 . + . ID=gene-D8M40_08310;Name=D8M40_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08310 RBME01000010.1 Protein Homology CDS 75371 75868 . + 0 ID=cds-RUP88220.1;Parent=gene-D8M40_08310;Dbxref=NCBI_GP:RUP88220.1;Name=RUP88220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121272.1;locus_tag=D8M40_08310;product=50S ribosomal protein L17;protein_id=RUP88220.1;transl_table=11 RBME01000010.1 Genbank gene 76035 76238 . + . ID=gene-D8M40_08315;Name=D8M40_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08315 RBME01000010.1 Protein Homology CDS 76035 76238 . + 0 ID=cds-RUP88221.1;Parent=gene-D8M40_08315;Dbxref=NCBI_GP:RUP88221.1;Name=RUP88221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121270.1;locus_tag=D8M40_08315;product=DUF2892 domain-containing protein;protein_id=RUP88221.1;transl_table=11 RBME01000010.1 Genbank gene 76320 77186 . - . ID=gene-D8M40_08320;Name=D8M40_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08320 RBME01000010.1 Protein Homology CDS 76320 77186 . - 0 ID=cds-RUP88222.1;Parent=gene-D8M40_08320;Dbxref=NCBI_GP:RUP88222.1;Name=RUP88222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00950.15;locus_tag=D8M40_08320;product=metal ABC transporter permease;protein_id=RUP88222.1;transl_table=11 RBME01000010.1 Genbank gene 77183 78055 . - . ID=gene-D8M40_08325;Name=D8M40_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08325 RBME01000010.1 Protein Homology CDS 77183 78055 . - 0 ID=cds-RUP88223.1;Parent=gene-D8M40_08325;Dbxref=NCBI_GP:RUP88223.1;Name=RUP88223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00950.15;locus_tag=D8M40_08325;product=metal ABC transporter permease;protein_id=RUP88223.1;transl_table=11 RBME01000010.1 Genbank gene 78052 78843 . - . ID=gene-D8M40_08330;Name=D8M40_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08330 RBME01000010.1 Protein Homology CDS 78052 78843 . - 0 ID=cds-RUP88224.1;Parent=gene-D8M40_08330;Dbxref=NCBI_GP:RUP88224.1;Name=RUP88224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121620.1;locus_tag=D8M40_08330;product=metal ABC transporter ATP-binding protein;protein_id=RUP88224.1;transl_table=11 RBME01000010.1 Genbank gene 78976 79938 . - . ID=gene-D8M40_08335;Name=D8M40_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08335 RBME01000010.1 Protein Homology CDS 78976 79938 . - 0 ID=cds-RUP88225.1;Parent=gene-D8M40_08335;Dbxref=NCBI_GP:RUP88225.1;Name=RUP88225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850159.1;locus_tag=D8M40_08335;product=zinc ABC transporter substrate-binding protein;protein_id=RUP88225.1;transl_table=11 RBME01000010.1 Genbank gene 80105 80890 . + . ID=gene-D8M40_08340;Name=D8M40_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08340 RBME01000010.1 Protein Homology CDS 80105 80890 . + 0 ID=cds-RUP88226.1;Parent=gene-D8M40_08340;Dbxref=NCBI_GP:RUP88226.1;Name=RUP88226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327928.1;locus_tag=D8M40_08340;product=metal-dependent transcriptional regulator;protein_id=RUP88226.1;transl_table=11 RBME01000010.1 Genbank gene 80880 81764 . + . ID=gene-D8M40_08345;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=D8M40_08345 RBME01000010.1 Protein Homology CDS 80880 81764 . + 0 ID=cds-RUP88227.1;Parent=gene-D8M40_08345;Dbxref=NCBI_GP:RUP88227.1;Name=RUP88227.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848279.1;locus_tag=D8M40_08345;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=RUP88227.1;transl_table=11 RBME01000010.1 Genbank gene 81830 83398 . + . ID=gene-D8M40_08350;Name=eccB;gbkey=Gene;gene=eccB;gene_biotype=protein_coding;locus_tag=D8M40_08350 RBME01000010.1 Protein Homology CDS 81830 83398 . + 0 ID=cds-RUP88228.1;Parent=gene-D8M40_08350;Dbxref=NCBI_GP:RUP88228.1;Name=RUP88228.1;gbkey=CDS;gene=eccB;inference=COORDINATES: protein motif:HMM:PF05108.11;locus_tag=D8M40_08350;product=type VII secretion protein EccB;protein_id=RUP88228.1;transl_table=11 RBME01000010.1 Genbank gene 83519 85141 . - . ID=gene-D8M40_08355;Name=D8M40_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08355 RBME01000010.1 Protein Homology CDS 83519 85141 . - 0 ID=cds-RUP88229.1;Parent=gene-D8M40_08355;Dbxref=NCBI_GP:RUP88229.1;Name=RUP88229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00082.20;locus_tag=D8M40_08355;product=hypothetical protein;protein_id=RUP88229.1;transl_table=11 RBME01000010.1 Genbank gene 85081 86475 . - . ID=gene-D8M40_08360;Name=eccD;gbkey=Gene;gene=eccD;gene_biotype=protein_coding;locus_tag=D8M40_08360 RBME01000010.1 Protein Homology CDS 85081 86475 . - 0 ID=cds-RUP88230.1;Parent=gene-D8M40_08360;Dbxref=NCBI_GP:RUP88230.1;Name=RUP88230.1;gbkey=CDS;gene=eccD;inference=COORDINATES: protein motif:HMM:TIGR03920;locus_tag=D8M40_08360;product=type VII secretion integral membrane protein EccD;protein_id=RUP88230.1;transl_table=11 RBME01000010.1 Genbank pseudogene 86612 90565 . + . ID=gene-D8M40_08365;Name=eccCa;gbkey=Gene;gene=eccCa;gene_biotype=pseudogene;locus_tag=D8M40_08365;pseudo=true RBME01000010.1 Protein Homology CDS 86612 90565 . + 0 ID=cds-D8M40_08365;Parent=gene-D8M40_08365;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=eccCa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121612.1;locus_tag=D8M40_08365;product=type VII secretion protein EccCa;pseudo=true;transl_table=11 RBME01000010.1 Genbank gene 90667 91851 . + . ID=gene-D8M40_08370;Name=D8M40_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08370 RBME01000010.1 Protein Homology CDS 90667 91851 . + 0 ID=cds-RUP88231.1;Parent=gene-D8M40_08370;Dbxref=NCBI_GP:RUP88231.1;Name=RUP88231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03931;locus_tag=D8M40_08370;product=type VII secretion-associated protein;protein_id=RUP88231.1;transl_table=11 RBME01000010.1 Genbank gene 91998 92315 . + . ID=gene-D8M40_08375;Name=D8M40_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08375 RBME01000010.1 Protein Homology CDS 91998 92315 . + 0 ID=cds-RUP88232.1;Parent=gene-D8M40_08375;Dbxref=NCBI_GP:RUP88232.1;Name=RUP88232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823266.1;locus_tag=D8M40_08375;product=WXG100 family type VII secretion target;protein_id=RUP88232.1;transl_table=11 RBME01000010.1 Genbank gene 92406 92693 . + . ID=gene-D8M40_08380;Name=D8M40_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08380 RBME01000010.1 Protein Homology CDS 92406 92693 . + 0 ID=cds-RUP88242.1;Parent=gene-D8M40_08380;Dbxref=NCBI_GP:RUP88242.1;Name=RUP88242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848225.1;locus_tag=D8M40_08380;product=WXG100 family type VII secretion target;protein_id=RUP88242.1;transl_table=11 RBME01000010.1 Genbank gene 93016 93459 . + . ID=gene-D8M40_08385;Name=D8M40_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08385 RBME01000010.1 Protein Homology CDS 93016 93459 . + 0 ID=cds-RUP88233.1;Parent=gene-D8M40_08385;Dbxref=NCBI_GP:RUP88233.1;Name=RUP88233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286590.1;locus_tag=D8M40_08385;product=50S ribosomal protein L13;protein_id=RUP88233.1;transl_table=11 RBME01000010.1 Genbank gene 93459 93998 . + . ID=gene-D8M40_08390;Name=D8M40_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08390 RBME01000010.1 Protein Homology CDS 93459 93998 . + 0 ID=cds-RUP88234.1;Parent=gene-D8M40_08390;Dbxref=NCBI_GP:RUP88234.1;Name=RUP88234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004566875.1;locus_tag=D8M40_08390;product=30S ribosomal protein S9;protein_id=RUP88234.1;transl_table=11 RBME01000010.1 Genbank gene 94336 94716 . + . ID=gene-D8M40_08395;Name=D8M40_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08395 RBME01000010.1 GeneMarkS+ CDS 94336 94716 . + 0 ID=cds-RUP88235.1;Parent=gene-D8M40_08395;Dbxref=NCBI_GP:RUP88235.1;Name=RUP88235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08395;product=hypothetical protein;protein_id=RUP88235.1;transl_table=11 RBME01000010.1 Genbank pseudogene 94830 95947 . - . ID=gene-D8M40_08400;Name=D8M40_08400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_08400;pseudo=true RBME01000010.1 Protein Homology CDS 94830 95947 . - 0 ID=cds-D8M40_08400;Parent=gene-D8M40_08400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M40_08400;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000010.1 Genbank pseudogene 96302 96727 . - . ID=gene-D8M40_08405;Name=D8M40_08405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_08405;pseudo=true RBME01000010.1 Protein Homology CDS 96302 96727 . - 0 ID=cds-D8M40_08405;Parent=gene-D8M40_08405;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121479.1;locus_tag=D8M40_08405;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region RBME01000110.1 1 889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000110.1 Genbank region 1 889 . + . ID=RBME01000110.1:1..889;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000110.1 Genbank gene 1 678 . + . ID=gene-D8M40_11985;Name=D8M40_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11985;partial=true;start_range=.,1 RBME01000110.1 Protein Homology CDS 1 678 . + 0 ID=cds-RUP85342.1;Parent=gene-D8M40_11985;Dbxref=NCBI_GP:RUP85342.1;Name=RUP85342.1;Note=Catalyzes the cycloisomerization of cis%2Ccis-muconate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015371453.1;locus_tag=D8M40_11985;partial=true;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=RUP85342.1;start_range=.,1;transl_table=11 RBME01000110.1 Genbank gene 689 889 . + . ID=gene-D8M40_11990;Name=D8M40_11990;end_range=889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11990;partial=true RBME01000110.1 Protein Homology CDS 689 889 . + 0 ID=cds-RUP85343.1;Parent=gene-D8M40_11990;Dbxref=NCBI_GP:RUP85343.1;Name=RUP85343.1;end_range=889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003172400.1;locus_tag=D8M40_11990;partial=true;product=3-oxoadipate enol-lactonase;protein_id=RUP85343.1;transl_table=11 ##sequence-region RBME01000111.1 1 887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000111.1 Genbank region 1 887 . + . ID=RBME01000111.1:1..887;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000111.1 Genbank gene 1 85 . + . ID=gene-D8M40_11995;Name=D8M40_11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11995;partial=true;start_range=.,1 RBME01000111.1 Protein Homology CDS 1 85 . + 1 ID=cds-RUP85339.1;Parent=gene-D8M40_11995;Dbxref=NCBI_GP:RUP85339.1;Name=RUP85339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003200812.1;locus_tag=D8M40_11995;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP85339.1;start_range=.,1;transl_table=11 RBME01000111.1 Genbank gene 98 874 . + . ID=gene-D8M40_12000;Name=D8M40_12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12000 RBME01000111.1 Protein Homology CDS 98 874 . + 0 ID=cds-RUP85340.1;Parent=gene-D8M40_12000;Dbxref=NCBI_GP:RUP85340.1;Name=RUP85340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003236553.1;locus_tag=D8M40_12000;product=amino acid ABC transporter permease;protein_id=RUP85340.1;transl_table=11 ##sequence-region RBME01000112.1 1 885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000112.1 Genbank region 1 885 . + . ID=RBME01000112.1:1..885;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000112.1 Genbank gene 159 512 . - . ID=gene-D8M40_12005;Name=D8M40_12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12005 RBME01000112.1 Protein Homology CDS 159 512 . - 0 ID=cds-RUP85336.1;Parent=gene-D8M40_12005;Dbxref=NCBI_GP:RUP85336.1;Name=RUP85336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_789961.1;locus_tag=D8M40_12005;product=RidA family protein;protein_id=RUP85336.1;transl_table=11 RBME01000112.1 Genbank pseudogene 484 885 . - . ID=gene-D8M40_12010;Name=D8M40_12010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12010;pseudo=true RBME01000112.1 Protein Homology CDS 484 885 . - 1 ID=cds-D8M40_12010;Parent=gene-D8M40_12010;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002551524.1;locus_tag=D8M40_12010;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region RBME01000113.1 1 859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000113.1 Genbank region 1 859 . + . ID=RBME01000113.1:1..859;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000113.1 Genbank gene 1 848 . - . ID=gene-D8M40_12015;Name=D8M40_12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12015;partial=true;start_range=.,1 RBME01000113.1 Protein Homology CDS 1 848 . - 0 ID=cds-RUP85332.1;Parent=gene-D8M40_12015;Dbxref=NCBI_GP:RUP85332.1;Name=RUP85332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003213358.1;locus_tag=D8M40_12015;partial=true;product=type IV secretion protein Rhs;protein_id=RUP85332.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000114.1 1 873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000114.1 Genbank region 1 873 . + . ID=RBME01000114.1:1..873;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000114.1 Genbank gene 1 495 . - . ID=gene-D8M40_12020;Name=D8M40_12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12020;partial=true;start_range=.,1 RBME01000114.1 Protein Homology CDS 1 495 . - 0 ID=cds-RUP85158.1;Parent=gene-D8M40_12020;Dbxref=NCBI_GP:RUP85158.1;Name=RUP85158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003218960.1;locus_tag=D8M40_12020;partial=true;product=helicase;protein_id=RUP85158.1;start_range=.,1;transl_table=11 RBME01000114.1 Genbank gene 505 873 . - . ID=gene-D8M40_12025;Name=D8M40_12025;end_range=873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12025;partial=true RBME01000114.1 Protein Homology CDS 505 873 . - 0 ID=cds-RUP85159.1;Parent=gene-D8M40_12025;Dbxref=NCBI_GP:RUP85159.1;Name=RUP85159.1;end_range=873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010212058.1;locus_tag=D8M40_12025;partial=true;product=hypothetical protein;protein_id=RUP85159.1;transl_table=11 ##sequence-region RBME01000115.1 1 872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000115.1 Genbank region 1 872 . + . ID=RBME01000115.1:1..872;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000115.1 Genbank gene 1 872 . + . ID=gene-D8M40_12030;Name=D8M40_12030;end_range=872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12030;partial=true;start_range=.,1 RBME01000115.1 Protein Homology CDS 1 872 . + 2 ID=cds-RUP85156.1;Parent=gene-D8M40_12030;Dbxref=NCBI_GP:RUP85156.1;Name=RUP85156.1;end_range=872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973081.1;locus_tag=D8M40_12030;partial=true;product=acyltransferase;protein_id=RUP85156.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000116.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000116.1 Genbank region 1 871 . + . ID=RBME01000116.1:1..871;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000116.1 Genbank gene 1 871 . + . ID=gene-D8M40_12035;Name=D8M40_12035;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12035;partial=true;start_range=.,1 RBME01000116.1 Protein Homology CDS 1 871 . + 1 ID=cds-RUP85155.1;Parent=gene-D8M40_12035;Dbxref=NCBI_GP:RUP85155.1;Name=RUP85155.1;end_range=871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019818124.1;locus_tag=D8M40_12035;partial=true;product=serine/threonine protein kinase;protein_id=RUP85155.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000117.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000117.1 Genbank region 1 871 . + . ID=RBME01000117.1:1..871;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000117.1 Genbank gene 1 157 . - . ID=gene-D8M40_12040;Name=D8M40_12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12040;partial=true;start_range=.,1 RBME01000117.1 Protein Homology CDS 1 157 . - 0 ID=cds-RUP85152.1;Parent=gene-D8M40_12040;Dbxref=NCBI_GP:RUP85152.1;Name=RUP85152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017132437.1;locus_tag=D8M40_12040;partial=true;product=cold-shock protein;protein_id=RUP85152.1;start_range=.,1;transl_table=11 RBME01000117.1 Genbank gene 447 761 . - . ID=gene-D8M40_12045;Name=D8M40_12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12045 RBME01000117.1 Protein Homology CDS 447 761 . - 0 ID=cds-RUP85153.1;Parent=gene-D8M40_12045;Dbxref=NCBI_GP:RUP85153.1;Name=RUP85153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010209119.1;locus_tag=D8M40_12045;product=hypothetical protein;protein_id=RUP85153.1;transl_table=11 ##sequence-region RBME01000118.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000118.1 Genbank region 1 871 . + . ID=RBME01000118.1:1..871;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000118.1 Genbank gene 1 234 . - . ID=gene-D8M40_12050;Name=D8M40_12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12050;partial=true;start_range=.,1 RBME01000118.1 Protein Homology CDS 1 234 . - 0 ID=cds-RUP85148.1;Parent=gene-D8M40_12050;Dbxref=NCBI_GP:RUP85148.1;Name=RUP85148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010565614.1;locus_tag=D8M40_12050;partial=true;product=nuclear transport factor 2 family protein;protein_id=RUP85148.1;start_range=.,1;transl_table=11 RBME01000118.1 Genbank gene 227 871 . - . ID=gene-D8M40_12055;Name=D8M40_12055;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12055;partial=true RBME01000118.1 Protein Homology CDS 227 871 . - 0 ID=cds-RUP85149.1;Parent=gene-D8M40_12055;Dbxref=NCBI_GP:RUP85149.1;Name=RUP85149.1;end_range=871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372430.1;locus_tag=D8M40_12055;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=RUP85149.1;transl_table=11 ##sequence-region RBME01000119.1 1 870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000119.1 Genbank region 1 870 . + . ID=RBME01000119.1:1..870;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000119.1 Genbank gene 112 870 . + . ID=gene-D8M40_12060;Name=D8M40_12060;end_range=870,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12060;partial=true RBME01000119.1 Protein Homology CDS 112 870 . + 0 ID=cds-RUP85146.1;Parent=gene-D8M40_12060;Dbxref=NCBI_GP:RUP85146.1;Name=RUP85146.1;end_range=870,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_792580.1;locus_tag=D8M40_12060;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP85146.1;transl_table=11 ##sequence-region RBME01000011.1 1 90598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000011.1 Genbank region 1 90598 . + . ID=RBME01000011.1:1..90598;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000011.1 Genbank gene 173 955 . - . ID=gene-D8M40_08410;Name=D8M40_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08410 RBME01000011.1 Protein Homology CDS 173 955 . - 0 ID=cds-RUP88047.1;Parent=gene-D8M40_08410;Dbxref=NCBI_GP:RUP88047.1;Name=RUP88047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00378.18;locus_tag=D8M40_08410;product=enoyl-CoA hydratase;protein_id=RUP88047.1;transl_table=11 RBME01000011.1 Genbank gene 1082 2515 . - . ID=gene-D8M40_08415;Name=D8M40_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08415 RBME01000011.1 Protein Homology CDS 1082 2515 . - 0 ID=cds-RUP88048.1;Parent=gene-D8M40_08415;Dbxref=NCBI_GP:RUP88048.1;Name=RUP88048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120898.1;locus_tag=D8M40_08415;product=glutaminase;protein_id=RUP88048.1;transl_table=11 RBME01000011.1 Genbank gene 2630 3238 . + . ID=gene-D8M40_08420;Name=D8M40_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08420 RBME01000011.1 Protein Homology CDS 2630 3238 . + 0 ID=cds-RUP88049.1;Parent=gene-D8M40_08420;Dbxref=NCBI_GP:RUP88049.1;Name=RUP88049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120897.1;locus_tag=D8M40_08420;product=nicotinamidase;protein_id=RUP88049.1;transl_table=11 RBME01000011.1 Genbank gene 3292 3573 . - . ID=gene-D8M40_08425;Name=D8M40_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08425 RBME01000011.1 Protein Homology CDS 3292 3573 . - 0 ID=cds-RUP88050.1;Parent=gene-D8M40_08425;Dbxref=NCBI_GP:RUP88050.1;Name=RUP88050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119309.1;locus_tag=D8M40_08425;product=DUF3618 domain-containing protein;protein_id=RUP88050.1;transl_table=11 RBME01000011.1 Genbank gene 3704 4174 . + . ID=gene-D8M40_08430;Name=D8M40_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08430 RBME01000011.1 Protein Homology CDS 3704 4174 . + 0 ID=cds-RUP88051.1;Parent=gene-D8M40_08430;Dbxref=NCBI_GP:RUP88051.1;Name=RUP88051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327287.1;locus_tag=D8M40_08430;product=thioredoxin-dependent thiol peroxidase;protein_id=RUP88051.1;transl_table=11 RBME01000011.1 Genbank gene 4228 4848 . + . ID=gene-D8M40_08435;Name=D8M40_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08435 RBME01000011.1 Protein Homology CDS 4228 4848 . + 0 ID=cds-RUP88052.1;Parent=gene-D8M40_08435;Dbxref=NCBI_GP:RUP88052.1;Name=RUP88052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277809.1;locus_tag=D8M40_08435;product=TetR/AcrR family transcriptional regulator;protein_id=RUP88052.1;transl_table=11 RBME01000011.1 Genbank gene 4867 5271 . - . ID=gene-D8M40_08440;Name=D8M40_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08440 RBME01000011.1 Protein Homology CDS 4867 5271 . - 0 ID=cds-RUP88053.1;Parent=gene-D8M40_08440;Dbxref=NCBI_GP:RUP88053.1;Name=RUP88053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020581.1;locus_tag=D8M40_08440;product=holo-ACP synthase;protein_id=RUP88053.1;transl_table=11 RBME01000011.1 Genbank gene 5275 5952 . - . ID=gene-D8M40_08445;Name=D8M40_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08445 RBME01000011.1 Protein Homology CDS 5275 5952 . - 0 ID=cds-RUP88054.1;Parent=gene-D8M40_08445;Dbxref=NCBI_GP:RUP88054.1;Name=RUP88054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366995.1;locus_tag=D8M40_08445;product=dethiobiotin synthase;protein_id=RUP88054.1;transl_table=11 RBME01000011.1 Genbank gene 5977 7353 . - . ID=gene-D8M40_08450;Name=D8M40_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08450 RBME01000011.1 Protein Homology CDS 5977 7353 . - 0 ID=cds-RUP88114.1;Parent=gene-D8M40_08450;Dbxref=NCBI_GP:RUP88114.1;Name=RUP88114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530589.1;locus_tag=D8M40_08450;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=RUP88114.1;transl_table=11 RBME01000011.1 Genbank gene 7393 8343 . - . ID=gene-D8M40_08455;Name=D8M40_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08455 RBME01000011.1 Protein Homology CDS 7393 8343 . - 0 ID=cds-RUP88115.1;Parent=gene-D8M40_08455;Dbxref=NCBI_GP:RUP88115.1;Name=RUP88115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191235.1;locus_tag=D8M40_08455;product=SPFH domain-containing protein;protein_id=RUP88115.1;transl_table=11 RBME01000011.1 Genbank gene 8571 9407 . + . ID=gene-D8M40_08460;Name=D8M40_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08460 RBME01000011.1 Protein Homology CDS 8571 9407 . + 0 ID=cds-RUP88116.1;Parent=gene-D8M40_08460;Dbxref=NCBI_GP:RUP88116.1;Name=RUP88116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005510053.1;locus_tag=D8M40_08460;product=SDR family oxidoreductase;protein_id=RUP88116.1;transl_table=11 RBME01000011.1 Genbank gene 9438 10049 . + . ID=gene-D8M40_08465;Name=D8M40_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08465 RBME01000011.1 Protein Homology CDS 9438 10049 . + 0 ID=cds-RUP88055.1;Parent=gene-D8M40_08465;Dbxref=NCBI_GP:RUP88055.1;Name=RUP88055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120888.1;locus_tag=D8M40_08465;product=class I SAM-dependent methyltransferase;protein_id=RUP88055.1;transl_table=11 RBME01000011.1 Genbank gene 10530 10614 . - . ID=gene-D8M40_08470;Name=D8M40_08470;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08470 RBME01000011.1 tRNAscan-SE tRNA 10530 10614 . - . ID=rna-D8M40_08470;Parent=gene-D8M40_08470;anticodon=(pos:complement(10578..10580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08470;product=tRNA-Leu RBME01000011.1 tRNAscan-SE exon 10530 10614 . - . ID=exon-D8M40_08470-1;Parent=rna-D8M40_08470;anticodon=(pos:complement(10578..10580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08470;product=tRNA-Leu RBME01000011.1 Genbank gene 10720 11124 . + . ID=gene-D8M40_08475;Name=D8M40_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08475 RBME01000011.1 Protein Homology CDS 10720 11124 . + 0 ID=cds-RUP88117.1;Parent=gene-D8M40_08475;Dbxref=NCBI_GP:RUP88117.1;Name=RUP88117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191248.1;locus_tag=D8M40_08475;product=hypothetical protein;protein_id=RUP88117.1;transl_table=11 RBME01000011.1 Genbank gene 11124 11486 . + . ID=gene-D8M40_08480;Name=D8M40_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08480 RBME01000011.1 Protein Homology CDS 11124 11486 . + 0 ID=cds-RUP88056.1;Parent=gene-D8M40_08480;Dbxref=NCBI_GP:RUP88056.1;Name=RUP88056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822114.1;locus_tag=D8M40_08480;product=DUF3817 domain-containing protein;protein_id=RUP88056.1;transl_table=11 RBME01000011.1 Genbank gene 11584 12225 . - . ID=gene-D8M40_08485;Name=D8M40_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08485 RBME01000011.1 Protein Homology CDS 11584 12225 . - 0 ID=cds-RUP88057.1;Parent=gene-D8M40_08485;Dbxref=NCBI_GP:RUP88057.1;Name=RUP88057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327300.1;locus_tag=D8M40_08485;product=non-canonical purine NTP pyrophosphatase;protein_id=RUP88057.1;transl_table=11 RBME01000011.1 Genbank gene 12225 13016 . - . ID=gene-D8M40_08490;Name=D8M40_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08490 RBME01000011.1 Protein Homology CDS 12225 13016 . - 0 ID=cds-RUP88118.1;Parent=gene-D8M40_08490;Dbxref=NCBI_GP:RUP88118.1;Name=RUP88118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847199.1;locus_tag=D8M40_08490;product=ribonuclease PH;protein_id=RUP88118.1;transl_table=11 RBME01000011.1 Genbank gene 13048 13821 . - . ID=gene-D8M40_08495;Name=D8M40_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08495 RBME01000011.1 Protein Homology CDS 13048 13821 . - 0 ID=cds-RUP88058.1;Parent=gene-D8M40_08495;Dbxref=NCBI_GP:RUP88058.1;Name=RUP88058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531079.1;locus_tag=D8M40_08495;product=MBL fold metallo-hydrolase;protein_id=RUP88058.1;transl_table=11 RBME01000011.1 Genbank gene 13901 14734 . - . ID=gene-D8M40_08500;Name=D8M40_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08500 RBME01000011.1 Protein Homology CDS 13901 14734 . - 0 ID=cds-RUP88059.1;Parent=gene-D8M40_08500;Dbxref=NCBI_GP:RUP88059.1;Name=RUP88059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063017.1;locus_tag=D8M40_08500;product=glutamate racemase;protein_id=RUP88059.1;transl_table=11 RBME01000011.1 Genbank gene 14889 15599 . - . ID=gene-D8M40_08505;Name=D8M40_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08505 RBME01000011.1 Protein Homology CDS 14889 15599 . - 0 ID=cds-RUP88060.1;Parent=gene-D8M40_08505;Dbxref=NCBI_GP:RUP88060.1;Name=RUP88060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120878.1;locus_tag=D8M40_08505;product=rhomboid family intramembrane serine protease;protein_id=RUP88060.1;transl_table=11 RBME01000011.1 Genbank gene 15615 16703 . - . ID=gene-D8M40_08510;Name=D8M40_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08510 RBME01000011.1 Protein Homology CDS 15615 16703 . - 0 ID=cds-RUP88061.1;Parent=gene-D8M40_08510;Dbxref=NCBI_GP:RUP88061.1;Name=RUP88061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120877.1;locus_tag=D8M40_08510;product=peptidase S58 family protein;protein_id=RUP88061.1;transl_table=11 RBME01000011.1 Genbank gene 16718 17251 . - . ID=gene-D8M40_08515;Name=D8M40_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08515 RBME01000011.1 Protein Homology CDS 16718 17251 . - 0 ID=cds-RUP88062.1;Parent=gene-D8M40_08515;Dbxref=NCBI_GP:RUP88062.1;Name=RUP88062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120876.1;locus_tag=D8M40_08515;product=DUF2017 domain-containing protein;protein_id=RUP88062.1;transl_table=11 RBME01000011.1 Genbank gene 17303 17677 . - . ID=gene-D8M40_08520;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=D8M40_08520 RBME01000011.1 Protein Homology CDS 17303 17677 . - 0 ID=cds-RUP88063.1;Parent=gene-D8M40_08520;Dbxref=NCBI_GP:RUP88063.1;Name=RUP88063.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601717.1;locus_tag=D8M40_08520;product=ATP-dependent Clp protease adapter ClpS;protein_id=RUP88063.1;transl_table=11 RBME01000011.1 Genbank gene 17828 19171 . + . ID=gene-D8M40_08525;Name=D8M40_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08525 RBME01000011.1 Protein Homology CDS 17828 19171 . + 0 ID=cds-RUP88064.1;Parent=gene-D8M40_08525;Dbxref=NCBI_GP:RUP88064.1;Name=RUP88064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715274.1;locus_tag=D8M40_08525;product=nicotinate phosphoribosyltransferase;protein_id=RUP88064.1;transl_table=11 RBME01000011.1 Genbank gene 19172 21265 . + . ID=gene-D8M40_08530;Name=D8M40_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08530 RBME01000011.1 Protein Homology CDS 19172 21265 . + 0 ID=cds-RUP88065.1;Parent=gene-D8M40_08530;Dbxref=NCBI_GP:RUP88065.1;Name=RUP88065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120873.1;locus_tag=D8M40_08530;product=ATP-dependent DNA helicase;protein_id=RUP88065.1;transl_table=11 RBME01000011.1 Genbank gene 21262 22506 . - . ID=gene-D8M40_08535;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=D8M40_08535 RBME01000011.1 Protein Homology CDS 21262 22506 . - 0 ID=cds-RUP88066.1;Parent=gene-D8M40_08535;Dbxref=NCBI_GP:RUP88066.1;Name=RUP88066.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120872.1;locus_tag=D8M40_08535;product=phosphoserine phosphatase SerB;protein_id=RUP88066.1;transl_table=11 RBME01000011.1 Genbank gene 22860 24617 . - . ID=gene-D8M40_08540;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=D8M40_08540 RBME01000011.1 Protein Homology CDS 22860 24617 . - 0 ID=cds-RUP88067.1;Parent=gene-D8M40_08540;Dbxref=NCBI_GP:RUP88067.1;Name=RUP88067.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020558.1;locus_tag=D8M40_08540;product=cytochrome c oxidase subunit I;protein_id=RUP88067.1;transl_table=11 RBME01000011.1 Genbank gene 25033 26016 . - . ID=gene-D8M40_08545;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D8M40_08545 RBME01000011.1 Protein Homology CDS 25033 26016 . - 0 ID=cds-RUP88068.1;Parent=gene-D8M40_08545;Dbxref=NCBI_GP:RUP88068.1;Name=RUP88068.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014302265.1;locus_tag=D8M40_08545;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=RUP88068.1;transl_table=11 RBME01000011.1 Genbank gene 26164 26958 . + . ID=gene-D8M40_08550;Name=D8M40_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08550 RBME01000011.1 Protein Homology CDS 26164 26958 . + 0 ID=cds-RUP88069.1;Parent=gene-D8M40_08550;Dbxref=NCBI_GP:RUP88069.1;Name=RUP88069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120868.1;locus_tag=D8M40_08550;product=FadR family transcriptional regulator;protein_id=RUP88069.1;transl_table=11 RBME01000011.1 Genbank gene 27031 29193 . - . ID=gene-D8M40_08555;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D8M40_08555 RBME01000011.1 Protein Homology CDS 27031 29193 . - 0 ID=cds-RUP88070.1;Parent=gene-D8M40_08555;Dbxref=NCBI_GP:RUP88070.1;Name=RUP88070.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715276.1;locus_tag=D8M40_08555;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=RUP88070.1;transl_table=11 RBME01000011.1 Genbank gene 29285 29725 . - . ID=gene-D8M40_08560;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D8M40_08560 RBME01000011.1 Protein Homology CDS 29285 29725 . - 0 ID=cds-RUP88071.1;Parent=gene-D8M40_08560;Dbxref=NCBI_GP:RUP88071.1;Name=RUP88071.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120866.1;locus_tag=D8M40_08560;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=RUP88071.1;transl_table=11 RBME01000011.1 Genbank gene 29830 30075 . - . ID=gene-D8M40_08565;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=D8M40_08565 RBME01000011.1 Protein Homology CDS 29830 30075 . - 0 ID=cds-RUP88072.1;Parent=gene-D8M40_08565;Dbxref=NCBI_GP:RUP88072.1;Name=RUP88072.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284554.1;locus_tag=D8M40_08565;product=glutaredoxin-like protein NrdH;protein_id=RUP88072.1;transl_table=11 RBME01000011.1 Genbank gene 30575 30697 . - . ID=gene-D8M40_08570;Name=D8M40_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08570 RBME01000011.1 Protein Homology CDS 30575 30697 . - 0 ID=cds-RUP88073.1;Parent=gene-D8M40_08570;Dbxref=NCBI_GP:RUP88073.1;Name=RUP88073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600465.1;locus_tag=D8M40_08570;product=50S ribosomal protein L36;protein_id=RUP88073.1;transl_table=11 RBME01000011.1 Genbank gene 30802 32250 . - . ID=gene-D8M40_08575;Name=D8M40_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08575 RBME01000011.1 Protein Homology CDS 30802 32250 . - 0 ID=cds-RUP88119.1;Parent=gene-D8M40_08575;Dbxref=NCBI_GP:RUP88119.1;Name=RUP88119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582243.1;locus_tag=D8M40_08575;product=sugar porter family MFS transporter;protein_id=RUP88119.1;transl_table=11 RBME01000011.1 Genbank gene 32292 33146 . + . ID=gene-D8M40_08580;Name=D8M40_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08580 RBME01000011.1 Protein Homology CDS 32292 33146 . + 0 ID=cds-RUP88074.1;Parent=gene-D8M40_08580;Dbxref=NCBI_GP:RUP88074.1;Name=RUP88074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120861.1;locus_tag=D8M40_08580;product=ammonia-dependent NAD(+) synthetase;protein_id=RUP88074.1;transl_table=11 RBME01000011.1 Genbank gene 33188 33946 . - . ID=gene-D8M40_08585;Name=D8M40_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08585 RBME01000011.1 Protein Homology CDS 33188 33946 . - 0 ID=cds-RUP88075.1;Parent=gene-D8M40_08585;Dbxref=NCBI_GP:RUP88075.1;Name=RUP88075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120860.1;locus_tag=D8M40_08585;product=fructosamine kinase;protein_id=RUP88075.1;transl_table=11 RBME01000011.1 Genbank pseudogene 34033 34743 . + . ID=gene-D8M40_08590;Name=D8M40_08590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_08590;pseudo=true RBME01000011.1 Protein Homology CDS 34033 34743 . + 0 ID=cds-D8M40_08590;Parent=gene-D8M40_08590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852407.1;locus_tag=D8M40_08590;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000011.1 Genbank gene 34894 35367 . - . ID=gene-D8M40_08595;Name=D8M40_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08595 RBME01000011.1 Protein Homology CDS 34894 35367 . - 0 ID=cds-RUP88120.1;Parent=gene-D8M40_08595;Dbxref=NCBI_GP:RUP88120.1;Name=RUP88120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017488738.1;locus_tag=D8M40_08595;product=hypothetical protein;protein_id=RUP88120.1;transl_table=11 RBME01000011.1 Genbank gene 35512 36723 . + . ID=gene-D8M40_08600;Name=D8M40_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08600 RBME01000011.1 Protein Homology CDS 35512 36723 . + 0 ID=cds-RUP88076.1;Parent=gene-D8M40_08600;Dbxref=NCBI_GP:RUP88076.1;Name=RUP88076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022737.1;locus_tag=D8M40_08600;product=cytochrome P450;protein_id=RUP88076.1;transl_table=11 RBME01000011.1 Genbank gene 36814 36999 . - . ID=gene-D8M40_08605;Name=D8M40_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08605 RBME01000011.1 GeneMarkS+ CDS 36814 36999 . - 0 ID=cds-RUP88077.1;Parent=gene-D8M40_08605;Dbxref=NCBI_GP:RUP88077.1;Name=RUP88077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08605;product=hypothetical protein;protein_id=RUP88077.1;transl_table=11 RBME01000011.1 Genbank gene 37298 37370 . - . ID=gene-D8M40_08610;Name=D8M40_08610;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08610 RBME01000011.1 tRNAscan-SE tRNA 37298 37370 . - . ID=rna-D8M40_08610;Parent=gene-D8M40_08610;anticodon=(pos:complement(37335..37337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08610;product=tRNA-Ala RBME01000011.1 tRNAscan-SE exon 37298 37370 . - . ID=exon-D8M40_08610-1;Parent=rna-D8M40_08610;anticodon=(pos:complement(37335..37337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08610;product=tRNA-Ala RBME01000011.1 Genbank gene 37575 38294 . - . ID=gene-D8M40_08615;Name=D8M40_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08615 RBME01000011.1 Protein Homology CDS 37575 38294 . - 0 ID=cds-RUP88078.1;Parent=gene-D8M40_08615;Dbxref=NCBI_GP:RUP88078.1;Name=RUP88078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401752.1;locus_tag=D8M40_08615;product=hypothetical protein;protein_id=RUP88078.1;transl_table=11 RBME01000011.1 Genbank gene 38360 38797 . - . ID=gene-D8M40_08620;Name=D8M40_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08620 RBME01000011.1 Protein Homology CDS 38360 38797 . - 0 ID=cds-RUP88121.1;Parent=gene-D8M40_08620;Dbxref=NCBI_GP:RUP88121.1;Name=RUP88121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327342.1;locus_tag=D8M40_08620;product=DoxX family membrane protein;protein_id=RUP88121.1;transl_table=11 RBME01000011.1 Genbank gene 38883 41498 . - . ID=gene-D8M40_08625;Name=D8M40_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08625 RBME01000011.1 Protein Homology CDS 38883 41498 . - 0 ID=cds-RUP88079.1;Parent=gene-D8M40_08625;Dbxref=NCBI_GP:RUP88079.1;Name=RUP88079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191299.1;locus_tag=D8M40_08625;product=FtsX-like permease family protein;protein_id=RUP88079.1;transl_table=11 RBME01000011.1 Genbank gene 41501 42319 . - . ID=gene-D8M40_08630;Name=D8M40_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08630 RBME01000011.1 Protein Homology CDS 41501 42319 . - 0 ID=cds-RUP88080.1;Parent=gene-D8M40_08630;Dbxref=NCBI_GP:RUP88080.1;Name=RUP88080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005288765.1;locus_tag=D8M40_08630;product=ABC transporter ATP-binding protein;protein_id=RUP88080.1;transl_table=11 RBME01000011.1 Genbank gene 42481 43743 . - . ID=gene-D8M40_08635;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=D8M40_08635 RBME01000011.1 Protein Homology CDS 42481 43743 . - 0 ID=cds-RUP88081.1;Parent=gene-D8M40_08635;Dbxref=NCBI_GP:RUP88081.1;Name=RUP88081.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857072.1;locus_tag=D8M40_08635;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=RUP88081.1;transl_table=11 RBME01000011.1 Genbank gene 43837 44679 . - . ID=gene-D8M40_08640;Name=D8M40_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08640 RBME01000011.1 Protein Homology CDS 43837 44679 . - 0 ID=cds-RUP88082.1;Parent=gene-D8M40_08640;Dbxref=NCBI_GP:RUP88082.1;Name=RUP88082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823120.1;locus_tag=D8M40_08640;product=GAF domain-containing protein;protein_id=RUP88082.1;transl_table=11 RBME01000011.1 Genbank gene 44980 45915 . + . ID=gene-D8M40_08645;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=D8M40_08645 RBME01000011.1 Protein Homology CDS 44980 45915 . + 0 ID=cds-RUP88083.1;Parent=gene-D8M40_08645;Dbxref=NCBI_GP:RUP88083.1;Name=RUP88083.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297416.1;locus_tag=D8M40_08645;product=cysteine synthase A;protein_id=RUP88083.1;transl_table=11 RBME01000011.1 Genbank gene 45937 46503 . + . ID=gene-D8M40_08650;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=D8M40_08650 RBME01000011.1 Protein Homology CDS 45937 46503 . + 0 ID=cds-RUP88084.1;Parent=gene-D8M40_08650;Dbxref=NCBI_GP:RUP88084.1;Name=RUP88084.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005525457.1;locus_tag=D8M40_08650;product=serine O-acetyltransferase;protein_id=RUP88084.1;transl_table=11 RBME01000011.1 Genbank gene 46698 46988 . - . ID=gene-D8M40_08655;Name=D8M40_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08655 RBME01000011.1 Protein Homology CDS 46698 46988 . - 0 ID=cds-RUP88085.1;Parent=gene-D8M40_08655;Dbxref=NCBI_GP:RUP88085.1;Name=RUP88085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022743.1;locus_tag=D8M40_08655;product=N-acetyltransferase;protein_id=RUP88085.1;transl_table=11 RBME01000011.1 Genbank gene 47157 47229 . - . ID=gene-D8M40_08660;Name=D8M40_08660;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08660 RBME01000011.1 tRNAscan-SE tRNA 47157 47229 . - . ID=rna-D8M40_08660;Parent=gene-D8M40_08660;anticodon=(pos:complement(47194..47196));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08660;product=tRNA-Phe RBME01000011.1 tRNAscan-SE exon 47157 47229 . - . ID=exon-D8M40_08660-1;Parent=rna-D8M40_08660;anticodon=(pos:complement(47194..47196));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08660;product=tRNA-Phe RBME01000011.1 Genbank gene 47284 47357 . - . ID=gene-D8M40_08665;Name=D8M40_08665;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08665 RBME01000011.1 tRNAscan-SE tRNA 47284 47357 . - . ID=rna-D8M40_08665;Parent=gene-D8M40_08665;anticodon=(pos:complement(47321..47323));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08665;product=tRNA-Asp RBME01000011.1 tRNAscan-SE exon 47284 47357 . - . ID=exon-D8M40_08665-1;Parent=rna-D8M40_08665;anticodon=(pos:complement(47321..47323));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08665;product=tRNA-Asp RBME01000011.1 Genbank gene 47531 48367 . + . ID=gene-D8M40_08670;Name=D8M40_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08670 RBME01000011.1 Protein Homology CDS 47531 48367 . + 0 ID=cds-RUP88086.1;Parent=gene-D8M40_08670;Dbxref=NCBI_GP:RUP88086.1;Name=RUP88086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120846.1;locus_tag=D8M40_08670;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=RUP88086.1;transl_table=11 RBME01000011.1 Genbank gene 48416 48492 . - . ID=gene-D8M40_08675;Name=D8M40_08675;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08675 RBME01000011.1 tRNAscan-SE tRNA 48416 48492 . - . ID=rna-D8M40_08675;Parent=gene-D8M40_08675;anticodon=(pos:complement(48456..48458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08675;product=tRNA-Asp RBME01000011.1 tRNAscan-SE exon 48416 48492 . - . ID=exon-D8M40_08675-1;Parent=rna-D8M40_08675;anticodon=(pos:complement(48456..48458));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08675;product=tRNA-Asp RBME01000011.1 Genbank gene 48521 48596 . - . ID=gene-D8M40_08680;Name=D8M40_08680;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08680 RBME01000011.1 tRNAscan-SE tRNA 48521 48596 . - . ID=rna-D8M40_08680;Parent=gene-D8M40_08680;anticodon=(pos:complement(48560..48562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08680;product=tRNA-Glu RBME01000011.1 tRNAscan-SE exon 48521 48596 . - . ID=exon-D8M40_08680-1;Parent=rna-D8M40_08680;anticodon=(pos:complement(48560..48562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08680;product=tRNA-Glu RBME01000011.1 Genbank gene 48836 49168 . + . ID=gene-D8M40_08685;Name=D8M40_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08685 RBME01000011.1 Protein Homology CDS 48836 49168 . + 0 ID=cds-RUP88122.1;Parent=gene-D8M40_08685;Dbxref=NCBI_GP:RUP88122.1;Name=RUP88122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189026.1;locus_tag=D8M40_08685;product=transcriptional regulator;protein_id=RUP88122.1;transl_table=11 RBME01000011.1 Genbank gene 49169 50344 . - . ID=gene-D8M40_08690;Name=D8M40_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08690 RBME01000011.1 Protein Homology CDS 49169 50344 . - 0 ID=cds-RUP88123.1;Parent=gene-D8M40_08690;Dbxref=NCBI_GP:RUP88123.1;Name=RUP88123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400454.1;locus_tag=D8M40_08690;product=DUF4185 domain-containing protein;protein_id=RUP88123.1;transl_table=11 RBME01000011.1 Genbank gene 50736 50978 . + . ID=gene-D8M40_08695;Name=D8M40_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08695 RBME01000011.1 Protein Homology CDS 50736 50978 . + 0 ID=cds-RUP88124.1;Parent=gene-D8M40_08695;Dbxref=NCBI_GP:RUP88124.1;Name=RUP88124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120843.1;locus_tag=D8M40_08695;product=copper chaperone;protein_id=RUP88124.1;transl_table=11 RBME01000011.1 Genbank gene 51161 53380 . + . ID=gene-D8M40_08700;Name=D8M40_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08700 RBME01000011.1 Protein Homology CDS 51161 53380 . + 0 ID=cds-RUP88125.1;Parent=gene-D8M40_08700;Dbxref=NCBI_GP:RUP88125.1;Name=RUP88125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007318967.1;locus_tag=D8M40_08700;product=copper-translocating P-type ATPase;protein_id=RUP88125.1;transl_table=11 RBME01000011.1 Genbank gene 53578 53650 . - . ID=gene-D8M40_08705;Name=D8M40_08705;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_08705 RBME01000011.1 tRNAscan-SE tRNA 53578 53650 . - . ID=rna-D8M40_08705;Parent=gene-D8M40_08705;anticodon=(pos:complement(53615..53617));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08705;product=tRNA-Lys RBME01000011.1 tRNAscan-SE exon 53578 53650 . - . ID=exon-D8M40_08705-1;Parent=rna-D8M40_08705;anticodon=(pos:complement(53615..53617));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_08705;product=tRNA-Lys RBME01000011.1 Genbank gene 53809 55320 . - . ID=gene-D8M40_08710;Name=D8M40_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08710 RBME01000011.1 Protein Homology CDS 53809 55320 . - 0 ID=cds-RUP88087.1;Parent=gene-D8M40_08710;Dbxref=NCBI_GP:RUP88087.1;Name=RUP88087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823135.1;locus_tag=D8M40_08710;product=acetyl-CoA hydrolase/transferase family protein;protein_id=RUP88087.1;transl_table=11 RBME01000011.1 Genbank gene 55627 56775 . + . ID=gene-D8M40_08715;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=D8M40_08715 RBME01000011.1 Protein Homology CDS 55627 56775 . + 0 ID=cds-RUP88088.1;Parent=gene-D8M40_08715;Dbxref=NCBI_GP:RUP88088.1;Name=RUP88088.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601768.2;locus_tag=D8M40_08715;product=tRNA dihydrouridine synthase DusB;protein_id=RUP88088.1;transl_table=11 RBME01000011.1 Genbank gene 56855 57538 . + . ID=gene-D8M40_08720;Name=D8M40_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08720 RBME01000011.1 Protein Homology CDS 56855 57538 . + 0 ID=cds-RUP88089.1;Parent=gene-D8M40_08720;Dbxref=NCBI_GP:RUP88089.1;Name=RUP88089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120838.1;locus_tag=D8M40_08720;product=phosphate uptake regulator PhoU;protein_id=RUP88089.1;transl_table=11 RBME01000011.1 Genbank gene 57657 58436 . - . ID=gene-D8M40_08725;Name=D8M40_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08725 RBME01000011.1 Protein Homology CDS 57657 58436 . - 0 ID=cds-RUP88090.1;Parent=gene-D8M40_08725;Dbxref=NCBI_GP:RUP88090.1;Name=RUP88090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769179.1;locus_tag=D8M40_08725;product=phosphate ABC transporter ATP-binding protein;protein_id=RUP88090.1;transl_table=11 RBME01000011.1 Genbank gene 58456 59349 . - . ID=gene-D8M40_08730;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=D8M40_08730 RBME01000011.1 Protein Homology CDS 58456 59349 . - 0 ID=cds-RUP88091.1;Parent=gene-D8M40_08730;Dbxref=NCBI_GP:RUP88091.1;Name=RUP88091.1;gbkey=CDS;gene=pstA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120836.1;locus_tag=D8M40_08730;product=phosphate ABC transporter permease PstA;protein_id=RUP88091.1;transl_table=11 RBME01000011.1 Genbank gene 59346 60323 . - . ID=gene-D8M40_08735;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=D8M40_08735 RBME01000011.1 Protein Homology CDS 59346 60323 . - 0 ID=cds-RUP88092.1;Parent=gene-D8M40_08735;Dbxref=NCBI_GP:RUP88092.1;Name=RUP88092.1;gbkey=CDS;gene=pstC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120835.1;locus_tag=D8M40_08735;product=phosphate ABC transporter permease subunit PstC;protein_id=RUP88092.1;transl_table=11 RBME01000011.1 Genbank gene 60379 61569 . - . ID=gene-D8M40_08740;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=D8M40_08740 RBME01000011.1 Protein Homology CDS 60379 61569 . - 0 ID=cds-RUP88093.1;Parent=gene-D8M40_08740;Dbxref=NCBI_GP:RUP88093.1;Name=RUP88093.1;gbkey=CDS;gene=pstS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120834.1;locus_tag=D8M40_08740;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=RUP88093.1;transl_table=11 RBME01000011.1 Genbank gene 61743 62891 . - . ID=gene-D8M40_08745;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=D8M40_08745 RBME01000011.1 Protein Homology CDS 61743 62891 . - 0 ID=cds-RUP88094.1;Parent=gene-D8M40_08745;Dbxref=NCBI_GP:RUP88094.1;Name=RUP88094.1;gbkey=CDS;gene=mshD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120833.1;locus_tag=D8M40_08745;product=mycothiol synthase;protein_id=RUP88094.1;transl_table=11 RBME01000011.1 Genbank gene 62922 63716 . + . ID=gene-D8M40_08750;Name=D8M40_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08750 RBME01000011.1 Protein Homology CDS 62922 63716 . + 0 ID=cds-RUP88095.1;Parent=gene-D8M40_08750;Dbxref=NCBI_GP:RUP88095.1;Name=RUP88095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11209.6;locus_tag=D8M40_08750;product=DUF2993 domain-containing protein;protein_id=RUP88095.1;transl_table=11 RBME01000011.1 Genbank gene 63719 64753 . - . ID=gene-D8M40_08755;Name=D8M40_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08755 RBME01000011.1 Protein Homology CDS 63719 64753 . - 0 ID=cds-RUP88096.1;Parent=gene-D8M40_08755;Dbxref=NCBI_GP:RUP88096.1;Name=RUP88096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189010.1;locus_tag=D8M40_08755;product=diacylglycerol kinase family lipid kinase;protein_id=RUP88096.1;transl_table=11 RBME01000011.1 Genbank gene 64795 65478 . + . ID=gene-D8M40_08760;Name=D8M40_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08760 RBME01000011.1 Protein Homology CDS 64795 65478 . + 0 ID=cds-RUP88126.1;Parent=gene-D8M40_08760;Dbxref=NCBI_GP:RUP88126.1;Name=RUP88126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360847.1;locus_tag=D8M40_08760;product=FABP family protein;protein_id=RUP88126.1;transl_table=11 RBME01000011.1 Genbank gene 65542 66540 . - . ID=gene-D8M40_08765;Name=D8M40_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08765 RBME01000011.1 Protein Homology CDS 65542 66540 . - 0 ID=cds-RUP88127.1;Parent=gene-D8M40_08765;Dbxref=NCBI_GP:RUP88127.1;Name=RUP88127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522223.1;locus_tag=D8M40_08765;product=aminodeoxychorismate lyase;protein_id=RUP88127.1;transl_table=11 RBME01000011.1 Genbank gene 66608 67816 . + . ID=gene-D8M40_08770;Name=D8M40_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08770 RBME01000011.1 Protein Homology CDS 66608 67816 . + 0 ID=cds-RUP88097.1;Parent=gene-D8M40_08770;Dbxref=NCBI_GP:RUP88097.1;Name=RUP88097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120828.1;locus_tag=D8M40_08770;product=folate-binding protein;protein_id=RUP88097.1;transl_table=11 RBME01000011.1 Genbank gene 67937 68110 . + . ID=gene-D8M40_08775;Name=D8M40_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08775 RBME01000011.1 Protein Homology CDS 67937 68110 . + 0 ID=cds-RUP88128.1;Parent=gene-D8M40_08775;Dbxref=NCBI_GP:RUP88128.1;Name=RUP88128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652021.1;locus_tag=D8M40_08775;product=DUF3073 domain-containing protein;protein_id=RUP88128.1;transl_table=11 RBME01000011.1 Genbank gene 68283 69365 . - . ID=gene-D8M40_08780;Name=D8M40_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08780 RBME01000011.1 Protein Homology CDS 68283 69365 . - 0 ID=cds-RUP88098.1;Parent=gene-D8M40_08780;Dbxref=NCBI_GP:RUP88098.1;Name=RUP88098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120826.1;locus_tag=D8M40_08780;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=RUP88098.1;transl_table=11 RBME01000011.1 Genbank gene 69433 70953 . - . ID=gene-D8M40_08785;Name=D8M40_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08785 RBME01000011.1 Protein Homology CDS 69433 70953 . - 0 ID=cds-RUP88129.1;Parent=gene-D8M40_08785;Dbxref=NCBI_GP:RUP88129.1;Name=RUP88129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118045.1;locus_tag=D8M40_08785;product=amidophosphoribosyltransferase;protein_id=RUP88129.1;transl_table=11 RBME01000011.1 Genbank gene 71059 71460 . - . ID=gene-D8M40_08790;Name=D8M40_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08790 RBME01000011.1 Protein Homology CDS 71059 71460 . - 0 ID=cds-RUP88099.1;Parent=gene-D8M40_08790;Dbxref=NCBI_GP:RUP88099.1;Name=RUP88099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325802.1;locus_tag=D8M40_08790;product=hypothetical protein;protein_id=RUP88099.1;transl_table=11 RBME01000011.1 Genbank gene 71545 72195 . - . ID=gene-D8M40_08795;Name=D8M40_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08795 RBME01000011.1 Protein Homology CDS 71545 72195 . - 0 ID=cds-RUP88130.1;Parent=gene-D8M40_08795;Dbxref=NCBI_GP:RUP88130.1;Name=RUP88130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531334.1;locus_tag=D8M40_08795;product=hemolysin III family protein;protein_id=RUP88130.1;transl_table=11 RBME01000011.1 Genbank gene 72432 74738 . - . ID=gene-D8M40_08800;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=D8M40_08800 RBME01000011.1 Protein Homology CDS 72432 74738 . - 0 ID=cds-RUP88100.1;Parent=gene-D8M40_08800;Dbxref=NCBI_GP:RUP88100.1;Name=RUP88100.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120822.1;locus_tag=D8M40_08800;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=RUP88100.1;transl_table=11 RBME01000011.1 Genbank gene 74751 75431 . - . ID=gene-D8M40_08805;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=D8M40_08805 RBME01000011.1 Protein Homology CDS 74751 75431 . - 0 ID=cds-RUP88101.1;Parent=gene-D8M40_08805;Dbxref=NCBI_GP:RUP88101.1;Name=RUP88101.1;gbkey=CDS;gene=purQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120821.1;locus_tag=D8M40_08805;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=RUP88101.1;transl_table=11 RBME01000011.1 Genbank gene 75431 75712 . - . ID=gene-D8M40_08810;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=D8M40_08810 RBME01000011.1 Protein Homology CDS 75431 75712 . - 0 ID=cds-RUP88102.1;Parent=gene-D8M40_08810;Dbxref=NCBI_GP:RUP88102.1;Name=RUP88102.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601788.1;locus_tag=D8M40_08810;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=RUP88102.1;transl_table=11 RBME01000011.1 Genbank gene 75803 77134 . - . ID=gene-D8M40_08815;Name=D8M40_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08815 RBME01000011.1 Protein Homology CDS 75803 77134 . - 0 ID=cds-RUP88103.1;Parent=gene-D8M40_08815;Dbxref=NCBI_GP:RUP88103.1;Name=RUP88103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120819.1;locus_tag=D8M40_08815;product=DUF2029 domain-containing protein;protein_id=RUP88103.1;transl_table=11 RBME01000011.1 Genbank gene 77137 79410 . - . ID=gene-D8M40_08820;Name=D8M40_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08820 RBME01000011.1 Protein Homology CDS 77137 79410 . - 0 ID=cds-RUP88104.1;Parent=gene-D8M40_08820;Dbxref=NCBI_GP:RUP88104.1;Name=RUP88104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120818.1;locus_tag=D8M40_08820;product=S9 family peptidase;protein_id=RUP88104.1;transl_table=11 RBME01000011.1 Genbank gene 79466 80365 . - . ID=gene-D8M40_08825;Name=D8M40_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08825 RBME01000011.1 Protein Homology CDS 79466 80365 . - 0 ID=cds-RUP88105.1;Parent=gene-D8M40_08825;Dbxref=NCBI_GP:RUP88105.1;Name=RUP88105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120817.1;locus_tag=D8M40_08825;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=RUP88105.1;transl_table=11 RBME01000011.1 Genbank gene 80417 81835 . - . ID=gene-D8M40_08830;Name=D8M40_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08830 RBME01000011.1 Protein Homology CDS 80417 81835 . - 0 ID=cds-RUP88106.1;Parent=gene-D8M40_08830;Dbxref=NCBI_GP:RUP88106.1;Name=RUP88106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014655764.1;locus_tag=D8M40_08830;product=adenylosuccinate lyase;protein_id=RUP88106.1;transl_table=11 RBME01000011.1 Genbank gene 81890 83167 . - . ID=gene-D8M40_08835;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=D8M40_08835 RBME01000011.1 Protein Homology CDS 81890 83167 . - 0 ID=cds-RUP88107.1;Parent=gene-D8M40_08835;Dbxref=NCBI_GP:RUP88107.1;Name=RUP88107.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188928.1;locus_tag=D8M40_08835;product=phosphoribosylamine--glycine ligase;protein_id=RUP88107.1;transl_table=11 RBME01000011.1 Genbank gene 83285 83710 . + . ID=gene-D8M40_08840;Name=D8M40_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08840 RBME01000011.1 Protein Homology CDS 83285 83710 . + 0 ID=cds-RUP88108.1;Parent=gene-D8M40_08840;Dbxref=NCBI_GP:RUP88108.1;Name=RUP88108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120814.1;locus_tag=D8M40_08840;product=HIT family protein;protein_id=RUP88108.1;transl_table=11 RBME01000011.1 Genbank gene 83707 85410 . - . ID=gene-D8M40_08845;Name=D8M40_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08845 RBME01000011.1 Protein Homology CDS 83707 85410 . - 0 ID=cds-RUP88109.1;Parent=gene-D8M40_08845;Dbxref=NCBI_GP:RUP88109.1;Name=RUP88109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120813.1;locus_tag=D8M40_08845;product=sensor histidine kinase;protein_id=RUP88109.1;transl_table=11 RBME01000011.1 Genbank gene 85445 86158 . - . ID=gene-D8M40_08850;Name=D8M40_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08850 RBME01000011.1 Protein Homology CDS 85445 86158 . - 0 ID=cds-RUP88110.1;Parent=gene-D8M40_08850;Dbxref=NCBI_GP:RUP88110.1;Name=RUP88110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188924.1;locus_tag=D8M40_08850;product=DNA-binding response regulator;protein_id=RUP88110.1;transl_table=11 RBME01000011.1 Genbank gene 86389 87417 . + . ID=gene-D8M40_08855;Name=D8M40_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08855 RBME01000011.1 Protein Homology CDS 86389 87417 . + 0 ID=cds-RUP88111.1;Parent=gene-D8M40_08855;Dbxref=NCBI_GP:RUP88111.1;Name=RUP88111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120811.1;locus_tag=D8M40_08855;product=ATP-binding cassette domain-containing protein;protein_id=RUP88111.1;transl_table=11 RBME01000011.1 Genbank gene 87417 88220 . + . ID=gene-D8M40_08860;Name=D8M40_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08860 RBME01000011.1 Protein Homology CDS 87417 88220 . + 0 ID=cds-RUP88112.1;Parent=gene-D8M40_08860;Dbxref=NCBI_GP:RUP88112.1;Name=RUP88112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120810.1;locus_tag=D8M40_08860;product=ABC transporter permease;protein_id=RUP88112.1;transl_table=11 RBME01000011.1 Genbank gene 88525 90510 . - . ID=gene-D8M40_08865;Name=D8M40_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08865 RBME01000011.1 GeneMarkS+ CDS 88525 90510 . - 0 ID=cds-RUP88113.1;Parent=gene-D8M40_08865;Dbxref=NCBI_GP:RUP88113.1;Name=RUP88113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08865;product=hypothetical protein;protein_id=RUP88113.1;transl_table=11 ##sequence-region RBME01000120.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000120.1 Genbank region 1 868 . + . ID=RBME01000120.1:1..868;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000120.1 Genbank gene 1 868 . + . ID=gene-D8M40_12065;Name=D8M40_12065;end_range=868,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12065;partial=true;start_range=.,1 RBME01000120.1 Protein Homology CDS 1 868 . + 0 ID=cds-RUP85144.1;Parent=gene-D8M40_12065;Dbxref=NCBI_GP:RUP85144.1;Name=RUP85144.1;end_range=868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017528053.1;locus_tag=D8M40_12065;partial=true;product=GAF domain-containing protein;protein_id=RUP85144.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000121.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000121.1 Genbank region 1 868 . + . ID=RBME01000121.1:1..868;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000121.1 Genbank gene 102 719 . - . ID=gene-D8M40_12070;Name=D8M40_12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12070 RBME01000121.1 GeneMarkS+ CDS 102 719 . - 0 ID=cds-RUP85142.1;Parent=gene-D8M40_12070;Dbxref=NCBI_GP:RUP85142.1;Name=RUP85142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12070;product=hypothetical protein;protein_id=RUP85142.1;transl_table=11 ##sequence-region RBME01000122.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000122.1 Genbank region 1 868 . + . ID=RBME01000122.1:1..868;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000122.1 Genbank gene 1 402 . - . ID=gene-D8M40_12075;Name=D8M40_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12075;partial=true;start_range=.,1 RBME01000122.1 Protein Homology CDS 1 402 . - 0 ID=cds-RUP85139.1;Parent=gene-D8M40_12075;Dbxref=NCBI_GP:RUP85139.1;Name=RUP85139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005786197.1;locus_tag=D8M40_12075;partial=true;product=copper-binding protein;protein_id=RUP85139.1;start_range=.,1;transl_table=11 RBME01000122.1 Genbank gene 559 868 . + . ID=gene-D8M40_12080;Name=D8M40_12080;end_range=868,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12080;partial=true RBME01000122.1 Protein Homology CDS 559 868 . + 0 ID=cds-RUP85140.1;Parent=gene-D8M40_12080;Dbxref=NCBI_GP:RUP85140.1;Name=RUP85140.1;end_range=868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014717523.1;locus_tag=D8M40_12080;partial=true;product=response regulator;protein_id=RUP85140.1;transl_table=11 ##sequence-region RBME01000123.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000123.1 Genbank region 1 863 . + . ID=RBME01000123.1:1..863;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000123.1 Genbank gene 1 261 . + . ID=gene-D8M40_12085;Name=D8M40_12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12085;partial=true;start_range=.,1 RBME01000123.1 Protein Homology CDS 1 261 . + 0 ID=cds-RUP84984.1;Parent=gene-D8M40_12085;Dbxref=NCBI_GP:RUP84984.1;Name=RUP84984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017734688.1;locus_tag=D8M40_12085;partial=true;product=cytochrome c5 family protein;protein_id=RUP84984.1;start_range=.,1;transl_table=11 RBME01000123.1 Genbank pseudogene 295 863 . + . ID=gene-D8M40_12090;Name=D8M40_12090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12090;pseudo=true RBME01000123.1 Protein Homology CDS 295 863 . + 0 ID=cds-D8M40_12090;Parent=gene-D8M40_12090;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_254177.1;locus_tag=D8M40_12090;product=cytochrome c4;pseudo=true;transl_table=11 ##sequence-region RBME01000124.1 1 863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000124.1 Genbank region 1 863 . + . ID=RBME01000124.1:1..863;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000124.1 Genbank gene 3 863 . + . ID=gene-D8M40_12095;Name=D8M40_12095;end_range=863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12095;partial=true RBME01000124.1 Protein Homology CDS 3 863 . + 0 ID=cds-RUP84981.1;Parent=gene-D8M40_12095;Dbxref=NCBI_GP:RUP84981.1;Name=RUP84981.1;end_range=863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008061337.1;locus_tag=D8M40_12095;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP84981.1;transl_table=11 ##sequence-region RBME01000125.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000125.1 Genbank region 1 857 . + . ID=RBME01000125.1:1..857;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000125.1 Genbank gene 1 857 . - . ID=gene-D8M40_12100;Name=D8M40_12100;end_range=857,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12100;partial=true;start_range=.,1 RBME01000125.1 Protein Homology CDS 1 857 . - 2 ID=cds-RUP84979.1;Parent=gene-D8M40_12100;Dbxref=NCBI_GP:RUP84979.1;Name=RUP84979.1;end_range=857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973683.1;locus_tag=D8M40_12100;partial=true;product=ribonuclease E;protein_id=RUP84979.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000126.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000126.1 Genbank region 1 857 . + . ID=RBME01000126.1:1..857;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000126.1 Genbank gene 1 357 . + . ID=gene-D8M40_12105;Name=D8M40_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12105;partial=true;start_range=.,1 RBME01000126.1 Protein Homology CDS 1 357 . + 0 ID=cds-RUP84975.1;Parent=gene-D8M40_12105;Dbxref=NCBI_GP:RUP84975.1;Name=RUP84975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003176533.1;locus_tag=D8M40_12105;partial=true;product=cell envelope integrity protein CreD;protein_id=RUP84975.1;start_range=.,1;transl_table=11 RBME01000126.1 Genbank gene 442 857 . - . ID=gene-D8M40_12110;Name=D8M40_12110;end_range=857,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12110;partial=true RBME01000126.1 Protein Homology CDS 442 857 . - 2 ID=cds-RUP84976.1;Parent=gene-D8M40_12110;Dbxref=NCBI_GP:RUP84976.1;Name=RUP84976.1;end_range=857,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020302151.1;locus_tag=D8M40_12110;partial=true;product=glutathione S-transferase;protein_id=RUP84976.1;transl_table=11 ##sequence-region RBME01000127.1 1 856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000127.1 Genbank region 1 856 . + . ID=RBME01000127.1:1..856;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000127.1 Genbank gene 109 856 . - . ID=gene-D8M40_12115;Name=D8M40_12115;end_range=856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12115;partial=true RBME01000127.1 Protein Homology CDS 109 856 . - 1 ID=cds-RUP84973.1;Parent=gene-D8M40_12115;Dbxref=NCBI_GP:RUP84973.1;Name=RUP84973.1;end_range=856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003227583.1;locus_tag=D8M40_12115;partial=true;product=exodeoxyribonuclease I;protein_id=RUP84973.1;transl_table=11 ##sequence-region RBME01000128.1 1 856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000128.1 Genbank region 1 856 . + . ID=RBME01000128.1:1..856;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000128.1 Genbank gene 1 569 . - . ID=gene-D8M40_12120;Name=D8M40_12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12120;partial=true;start_range=.,1 RBME01000128.1 Protein Homology CDS 1 569 . - 0 ID=cds-RUP84969.1;Parent=gene-D8M40_12120;Dbxref=NCBI_GP:RUP84969.1;Name=RUP84969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020302461.1;locus_tag=D8M40_12120;partial=true;product=CpaF family protein;protein_id=RUP84969.1;start_range=.,1;transl_table=11 RBME01000128.1 Genbank gene 566 856 . - . ID=gene-D8M40_12125;Name=D8M40_12125;end_range=856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12125;partial=true RBME01000128.1 Protein Homology CDS 566 856 . - 0 ID=cds-RUP84970.1;Parent=gene-D8M40_12125;Dbxref=NCBI_GP:RUP84970.1;Name=RUP84970.1;end_range=856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016972488.1;locus_tag=D8M40_12125;partial=true;product=pilus assembly protein;protein_id=RUP84970.1;transl_table=11 ##sequence-region RBME01000129.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000129.1 Genbank region 1 855 . + . ID=RBME01000129.1:1..855;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000129.1 Genbank gene 1 514 . + . ID=gene-D8M40_12130;Name=D8M40_12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12130;partial=true;start_range=.,1 RBME01000129.1 Protein Homology CDS 1 514 . + 1 ID=cds-RUP84966.1;Parent=gene-D8M40_12130;Dbxref=NCBI_GP:RUP84966.1;Name=RUP84966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014718403.1;locus_tag=D8M40_12130;partial=true;product=S58 family peptidase;protein_id=RUP84966.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000012.1 1 75330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000012.1 Genbank region 1 75330 . + . ID=RBME01000012.1:1..75330;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000012.1 Genbank gene 1 91 . + . ID=gene-D8M40_08870;Name=D8M40_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08870;partial=true;start_range=.,1 RBME01000012.1 Protein Homology CDS 1 91 . + 1 ID=cds-RUP87968.1;Parent=gene-D8M40_08870;Dbxref=NCBI_GP:RUP87968.1;Name=RUP87968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M40_08870;partial=true;product=hypothetical protein;protein_id=RUP87968.1;start_range=.,1;transl_table=11 RBME01000012.1 Genbank pseudogene 198 1544 . + . ID=gene-D8M40_08875;Name=D8M40_08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_08875;pseudo=true RBME01000012.1 Protein Homology CDS 198 1544 . + 0 ID=cds-D8M40_08875;Parent=gene-D8M40_08875;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120728.1;locus_tag=D8M40_08875;product=AI-2E family transporter;pseudo=true;transl_table=11 RBME01000012.1 Genbank gene 1570 2652 . + . ID=gene-D8M40_08880;Name=D8M40_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08880 RBME01000012.1 Protein Homology CDS 1570 2652 . + 0 ID=cds-RUP87969.1;Parent=gene-D8M40_08880;Dbxref=NCBI_GP:RUP87969.1;Name=RUP87969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120727.1;locus_tag=D8M40_08880;product=nucleoside hydrolase;protein_id=RUP87969.1;transl_table=11 RBME01000012.1 Genbank gene 2877 3185 . + . ID=gene-D8M40_08885;Name=D8M40_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08885 RBME01000012.1 Protein Homology CDS 2877 3185 . + 0 ID=cds-RUP88021.1;Parent=gene-D8M40_08885;Dbxref=NCBI_GP:RUP88021.1;Name=RUP88021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768571.1;locus_tag=D8M40_08885;product=TM2 domain-containing protein;protein_id=RUP88021.1;transl_table=11 RBME01000012.1 Genbank gene 3466 4203 . + . ID=gene-D8M40_08890;Name=D8M40_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08890 RBME01000012.1 Protein Homology CDS 3466 4203 . + 0 ID=cds-RUP88022.1;Parent=gene-D8M40_08890;Dbxref=NCBI_GP:RUP88022.1;Name=RUP88022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279155.1;locus_tag=D8M40_08890;product=ECF transporter S component;protein_id=RUP88022.1;transl_table=11 RBME01000012.1 Genbank gene 4184 4924 . + . ID=gene-D8M40_08895;Name=D8M40_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08895 RBME01000012.1 Protein Homology CDS 4184 4924 . + 0 ID=cds-RUP87970.1;Parent=gene-D8M40_08895;Dbxref=NCBI_GP:RUP87970.1;Name=RUP87970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02361.14;locus_tag=D8M40_08895;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RUP87970.1;transl_table=11 RBME01000012.1 Genbank gene 4915 6219 . + . ID=gene-D8M40_08900;Name=D8M40_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08900 RBME01000012.1 Protein Homology CDS 4915 6219 . + 0 ID=cds-RUP87971.1;Parent=gene-D8M40_08900;Dbxref=NCBI_GP:RUP87971.1;Name=RUP87971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=D8M40_08900;product=ATP-binding cassette domain-containing protein;protein_id=RUP87971.1;transl_table=11 RBME01000012.1 Genbank gene 6288 6914 . + . ID=gene-D8M40_08905;Name=D8M40_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08905 RBME01000012.1 Protein Homology CDS 6288 6914 . + 0 ID=cds-RUP88023.1;Parent=gene-D8M40_08905;Dbxref=NCBI_GP:RUP88023.1;Name=RUP88023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188628.1;locus_tag=D8M40_08905;product=DUF1707 domain-containing protein;protein_id=RUP88023.1;transl_table=11 RBME01000012.1 Genbank gene 6936 8171 . + . ID=gene-D8M40_08910;Name=D8M40_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08910 RBME01000012.1 Protein Homology CDS 6936 8171 . + 0 ID=cds-RUP87972.1;Parent=gene-D8M40_08910;Dbxref=NCBI_GP:RUP87972.1;Name=RUP87972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188626.1;locus_tag=D8M40_08910;product=pyridoxal phosphate-dependent aminotransferase;protein_id=RUP87972.1;transl_table=11 RBME01000012.1 Genbank gene 8155 8706 . - . ID=gene-D8M40_08915;Name=D8M40_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08915 RBME01000012.1 GeneMarkS+ CDS 8155 8706 . - 0 ID=cds-RUP87973.1;Parent=gene-D8M40_08915;Dbxref=NCBI_GP:RUP87973.1;Name=RUP87973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08915;product=hypothetical protein;protein_id=RUP87973.1;transl_table=11 RBME01000012.1 Genbank gene 8813 9133 . - . ID=gene-D8M40_08920;Name=D8M40_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08920 RBME01000012.1 GeneMarkS+ CDS 8813 9133 . - 0 ID=cds-RUP87974.1;Parent=gene-D8M40_08920;Dbxref=NCBI_GP:RUP87974.1;Name=RUP87974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08920;product=hypothetical protein;protein_id=RUP87974.1;transl_table=11 RBME01000012.1 Genbank gene 9735 11123 . - . ID=gene-D8M40_08925;Name=D8M40_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08925 RBME01000012.1 Protein Homology CDS 9735 11123 . - 0 ID=cds-RUP87975.1;Parent=gene-D8M40_08925;Dbxref=NCBI_GP:RUP87975.1;Name=RUP87975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120717.1;locus_tag=D8M40_08925;product=MFS transporter;protein_id=RUP87975.1;transl_table=11 RBME01000012.1 Genbank gene 11193 12812 . + . ID=gene-D8M40_08930;Name=D8M40_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08930 RBME01000012.1 Protein Homology CDS 11193 12812 . + 0 ID=cds-RUP87976.1;Parent=gene-D8M40_08930;Dbxref=NCBI_GP:RUP87976.1;Name=RUP87976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120716.1;locus_tag=D8M40_08930;product=ATPase of the ABC class;protein_id=RUP87976.1;transl_table=11 RBME01000012.1 Genbank gene 12864 14036 . - . ID=gene-D8M40_08935;Name=D8M40_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08935 RBME01000012.1 Protein Homology CDS 12864 14036 . - 0 ID=cds-RUP87977.1;Parent=gene-D8M40_08935;Dbxref=NCBI_GP:RUP87977.1;Name=RUP87977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284218.1;locus_tag=D8M40_08935;product=ATP-binding protein;protein_id=RUP87977.1;transl_table=11 RBME01000012.1 Genbank gene 14415 16082 . + . ID=gene-D8M40_08940;Name=D8M40_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08940 RBME01000012.1 Protein Homology CDS 14415 16082 . + 0 ID=cds-RUP87978.1;Parent=gene-D8M40_08940;Dbxref=NCBI_GP:RUP87978.1;Name=RUP87978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120714.1;locus_tag=D8M40_08940;product=HNH endonuclease;protein_id=RUP87978.1;transl_table=11 RBME01000012.1 Genbank gene 16129 17229 . - . ID=gene-D8M40_08945;Name=D8M40_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08945 RBME01000012.1 Protein Homology CDS 16129 17229 . - 0 ID=cds-RUP87979.1;Parent=gene-D8M40_08945;Dbxref=NCBI_GP:RUP87979.1;Name=RUP87979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014010999.1;locus_tag=D8M40_08945;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=RUP87979.1;transl_table=11 RBME01000012.1 Genbank gene 17341 20964 . - . ID=gene-D8M40_08950;Name=D8M40_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08950 RBME01000012.1 Protein Homology CDS 17341 20964 . - 0 ID=cds-RUP87980.1;Parent=gene-D8M40_08950;Dbxref=NCBI_GP:RUP87980.1;Name=RUP87980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00975.18%2CHMM:TIGR01733;locus_tag=D8M40_08950;product=non-ribosomal peptide synthetase;protein_id=RUP87980.1;transl_table=11 RBME01000012.1 Genbank gene 20970 21227 . - . ID=gene-D8M40_08955;Name=D8M40_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08955 RBME01000012.1 Protein Homology CDS 20970 21227 . - 0 ID=cds-RUP87981.1;Parent=gene-D8M40_08955;Dbxref=NCBI_GP:RUP87981.1;Name=RUP87981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015888649.1;locus_tag=D8M40_08955;product=hypothetical protein;protein_id=RUP87981.1;transl_table=11 RBME01000012.1 Genbank gene 21267 22859 . - . ID=gene-D8M40_08960;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=D8M40_08960 RBME01000012.1 Protein Homology CDS 21267 22859 . - 0 ID=cds-RUP87982.1;Parent=gene-D8M40_08960;Dbxref=NCBI_GP:RUP87982.1;Name=RUP87982.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120710.1;locus_tag=D8M40_08960;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=RUP87982.1;transl_table=11 RBME01000012.1 Genbank gene 22849 23943 . - . ID=gene-D8M40_08965;Name=D8M40_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08965 RBME01000012.1 Protein Homology CDS 22849 23943 . - 0 ID=cds-RUP88024.1;Parent=gene-D8M40_08965;Dbxref=NCBI_GP:RUP88024.1;Name=RUP88024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005524097.1;locus_tag=D8M40_08965;product=isochorismate synthase;protein_id=RUP88024.1;transl_table=11 RBME01000012.1 Genbank gene 23976 24632 . - . ID=gene-D8M40_08970;Name=D8M40_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08970 RBME01000012.1 Protein Homology CDS 23976 24632 . - 0 ID=cds-RUP87983.1;Parent=gene-D8M40_08970;Dbxref=NCBI_GP:RUP87983.1;Name=RUP87983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120708.1;locus_tag=D8M40_08970;product=isochorismatase family protein;protein_id=RUP87983.1;transl_table=11 RBME01000012.1 Genbank gene 24635 25444 . - . ID=gene-D8M40_08975;Name=D8M40_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08975 RBME01000012.1 Protein Homology CDS 24635 25444 . - 0 ID=cds-RUP87984.1;Parent=gene-D8M40_08975;Dbxref=NCBI_GP:RUP87984.1;Name=RUP87984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005986173.1;locus_tag=D8M40_08975;product=ABC transporter ATP-binding protein;protein_id=RUP87984.1;transl_table=11 RBME01000012.1 Genbank gene 25434 26471 . - . ID=gene-D8M40_08980;Name=D8M40_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08980 RBME01000012.1 Protein Homology CDS 25434 26471 . - 0 ID=cds-RUP87985.1;Parent=gene-D8M40_08980;Dbxref=NCBI_GP:RUP87985.1;Name=RUP87985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120706.1;locus_tag=D8M40_08980;product=Fe(3+)-siderophore ABC transporter permease;protein_id=RUP87985.1;transl_table=11 RBME01000012.1 Genbank gene 26484 27455 . - . ID=gene-D8M40_08985;Name=D8M40_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08985 RBME01000012.1 Protein Homology CDS 26484 27455 . - 0 ID=cds-RUP87986.1;Parent=gene-D8M40_08985;Dbxref=NCBI_GP:RUP87986.1;Name=RUP87986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120705.1;locus_tag=D8M40_08985;product=iron ABC transporter permease;protein_id=RUP87986.1;transl_table=11 RBME01000012.1 Genbank gene 27498 27755 . - . ID=gene-D8M40_08990;Name=D8M40_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_08990 RBME01000012.1 GeneMarkS+ CDS 27498 27755 . - 0 ID=cds-RUP87987.1;Parent=gene-D8M40_08990;Dbxref=NCBI_GP:RUP87987.1;Name=RUP87987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_08990;product=hypothetical protein;protein_id=RUP87987.1;transl_table=11 RBME01000012.1 Genbank pseudogene 27778 27870 . + . ID=gene-D8M40_08995;Name=D8M40_08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_08995;pseudo=true RBME01000012.1 Protein Homology CDS 27778 27870 . + 0 ID=cds-D8M40_08995;Parent=gene-D8M40_08995;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014380473.1;locus_tag=D8M40_08995;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;pseudo=true;transl_table=11 RBME01000012.1 Genbank gene 31065 32069 . - . ID=gene-D8M40_09000;Name=D8M40_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09000 RBME01000012.1 Protein Homology CDS 31065 32069 . - 0 ID=cds-RUP87988.1;Parent=gene-D8M40_09000;Dbxref=NCBI_GP:RUP87988.1;Name=RUP87988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013863625.1;locus_tag=D8M40_09000;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP87988.1;transl_table=11 RBME01000012.1 Genbank gene 32294 34870 . - . ID=gene-D8M40_09005;Name=D8M40_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09005 RBME01000012.1 GeneMarkS+ CDS 32294 34870 . - 0 ID=cds-RUP87989.1;Parent=gene-D8M40_09005;Dbxref=NCBI_GP:RUP87989.1;Name=RUP87989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09005;product=hypothetical protein;protein_id=RUP87989.1;transl_table=11 RBME01000012.1 Genbank gene 35330 36052 . + . ID=gene-D8M40_09010;Name=D8M40_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09010 RBME01000012.1 Protein Homology CDS 35330 36052 . + 0 ID=cds-RUP88025.1;Parent=gene-D8M40_09010;Dbxref=NCBI_GP:RUP88025.1;Name=RUP88025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007239245.1;locus_tag=D8M40_09010;product=SDR family oxidoreductase;protein_id=RUP88025.1;transl_table=11 RBME01000012.1 Genbank gene 36041 37312 . - . ID=gene-D8M40_09015;Name=D8M40_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09015 RBME01000012.1 Protein Homology CDS 36041 37312 . - 0 ID=cds-RUP87990.1;Parent=gene-D8M40_09015;Dbxref=NCBI_GP:RUP87990.1;Name=RUP87990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00756.18;locus_tag=D8M40_09015;product=DUF3327 domain-containing protein;protein_id=RUP87990.1;transl_table=11 RBME01000012.1 Genbank gene 37434 37916 . - . ID=gene-D8M40_09020;Name=D8M40_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09020 RBME01000012.1 Protein Homology CDS 37434 37916 . - 0 ID=cds-RUP87991.1;Parent=gene-D8M40_09020;Dbxref=NCBI_GP:RUP87991.1;Name=RUP87991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188264.1;locus_tag=D8M40_09020;product=ferritin;protein_id=RUP87991.1;transl_table=11 RBME01000012.1 Genbank gene 38283 39608 . - . ID=gene-D8M40_09025;Name=D8M40_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09025 RBME01000012.1 Protein Homology CDS 38283 39608 . - 0 ID=cds-RUP87992.1;Parent=gene-D8M40_09025;Dbxref=NCBI_GP:RUP87992.1;Name=RUP87992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768971.1;locus_tag=D8M40_09025;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=RUP87992.1;transl_table=11 RBME01000012.1 Genbank gene 39638 40201 . - . ID=gene-D8M40_09030;Name=D8M40_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09030 RBME01000012.1 Protein Homology CDS 39638 40201 . - 0 ID=cds-RUP87993.1;Parent=gene-D8M40_09030;Dbxref=NCBI_GP:RUP87993.1;Name=RUP87993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295967.1;locus_tag=D8M40_09030;product=dCTP deaminase;protein_id=RUP87993.1;transl_table=11 RBME01000012.1 Genbank gene 40265 41950 . - . ID=gene-D8M40_09035;Name=D8M40_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09035 RBME01000012.1 Protein Homology CDS 40265 41950 . - 0 ID=cds-RUP87994.1;Parent=gene-D8M40_09035;Dbxref=NCBI_GP:RUP87994.1;Name=RUP87994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329420.1;locus_tag=D8M40_09035;product=hypothetical protein;protein_id=RUP87994.1;transl_table=11 RBME01000012.1 Genbank gene 42094 42609 . + . ID=gene-D8M40_09040;Name=D8M40_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09040 RBME01000012.1 Protein Homology CDS 42094 42609 . + 0 ID=cds-RUP87995.1;Parent=gene-D8M40_09040;Dbxref=NCBI_GP:RUP87995.1;Name=RUP87995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120693.1;locus_tag=D8M40_09040;product=universal stress protein;protein_id=RUP87995.1;transl_table=11 RBME01000012.1 Genbank gene 42652 42861 . + . ID=gene-D8M40_09045;Name=D8M40_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09045 RBME01000012.1 Protein Homology CDS 42652 42861 . + 0 ID=cds-RUP87996.1;Parent=gene-D8M40_09045;Dbxref=NCBI_GP:RUP87996.1;Name=RUP87996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120692.1;locus_tag=D8M40_09045;product=DUF2613 family protein;protein_id=RUP87996.1;transl_table=11 RBME01000012.1 Genbank gene 42953 46258 . + . ID=gene-D8M40_09050;Name=D8M40_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09050 RBME01000012.1 Protein Homology CDS 42953 46258 . + 0 ID=cds-RUP88026.1;Parent=gene-D8M40_09050;Dbxref=NCBI_GP:RUP88026.1;Name=RUP88026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022075.1;locus_tag=D8M40_09050;product=DUF3367 domain-containing protein;protein_id=RUP88026.1;transl_table=11 RBME01000012.1 Genbank gene 46165 47301 . - . ID=gene-D8M40_09055;Name=D8M40_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09055 RBME01000012.1 Protein Homology CDS 46165 47301 . - 0 ID=cds-RUP87997.1;Parent=gene-D8M40_09055;Dbxref=NCBI_GP:RUP87997.1;Name=RUP87997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120690.1;locus_tag=D8M40_09055;product=acyltransferase;protein_id=RUP87997.1;transl_table=11 RBME01000012.1 Genbank gene 47311 48114 . - . ID=gene-D8M40_09060;Name=D8M40_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09060 RBME01000012.1 GeneMarkS+ CDS 47311 48114 . - 0 ID=cds-RUP87998.1;Parent=gene-D8M40_09060;Dbxref=NCBI_GP:RUP87998.1;Name=RUP87998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09060;product=hypothetical protein;protein_id=RUP87998.1;transl_table=11 RBME01000012.1 Genbank gene 48104 48823 . - . ID=gene-D8M40_09065;Name=D8M40_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09065 RBME01000012.1 GeneMarkS+ CDS 48104 48823 . - 0 ID=cds-RUP87999.1;Parent=gene-D8M40_09065;Dbxref=NCBI_GP:RUP87999.1;Name=RUP87999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09065;product=hypothetical protein;protein_id=RUP87999.1;transl_table=11 RBME01000012.1 Genbank gene 48876 50786 . - . ID=gene-D8M40_09070;Name=D8M40_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09070 RBME01000012.1 Protein Homology CDS 48876 50786 . - 0 ID=cds-RUP88000.1;Parent=gene-D8M40_09070;Dbxref=NCBI_GP:RUP88000.1;Name=RUP88000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08310.9;locus_tag=D8M40_09070;product=hypothetical protein;protein_id=RUP88000.1;transl_table=11 RBME01000012.1 Genbank gene 50922 52286 . + . ID=gene-D8M40_09075;Name=D8M40_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09075 RBME01000012.1 Protein Homology CDS 50922 52286 . + 0 ID=cds-RUP88001.1;Parent=gene-D8M40_09075;Dbxref=NCBI_GP:RUP88001.1;Name=RUP88001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11271.6;locus_tag=D8M40_09075;product=DUF3068 domain-containing protein;protein_id=RUP88001.1;transl_table=11 RBME01000012.1 Genbank gene 52290 53792 . + . ID=gene-D8M40_09080;Name=D8M40_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09080 RBME01000012.1 GeneMarkS+ CDS 52290 53792 . + 0 ID=cds-RUP88002.1;Parent=gene-D8M40_09080;Dbxref=NCBI_GP:RUP88002.1;Name=RUP88002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09080;product=hypothetical protein;protein_id=RUP88002.1;transl_table=11 RBME01000012.1 Genbank gene 53864 53952 . + . ID=gene-D8M40_09085;Name=D8M40_09085;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_09085 RBME01000012.1 tRNAscan-SE tRNA 53864 53952 . + . ID=rna-D8M40_09085;Parent=gene-D8M40_09085;anticodon=(pos:53898..53900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09085;product=tRNA-Ser RBME01000012.1 tRNAscan-SE exon 53864 53952 . + . ID=exon-D8M40_09085-1;Parent=rna-D8M40_09085;anticodon=(pos:53898..53900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09085;product=tRNA-Ser RBME01000012.1 Genbank pseudogene 54078 54305 . - . ID=gene-D8M40_09090;Name=D8M40_09090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09090;pseudo=true RBME01000012.1 Protein Homology CDS 54078 54305 . - 0 ID=cds-D8M40_09090;Parent=gene-D8M40_09090;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013888967.1;locus_tag=D8M40_09090;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000012.1 Genbank gene 54319 55386 . - . ID=gene-D8M40_09095;Name=D8M40_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09095 RBME01000012.1 Protein Homology CDS 54319 55386 . - 0 ID=cds-RUP88003.1;Parent=gene-D8M40_09095;Dbxref=NCBI_GP:RUP88003.1;Name=RUP88003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M40_09095;product=MFS transporter;protein_id=RUP88003.1;transl_table=11 RBME01000012.1 Genbank pseudogene 55677 56892 . + . ID=gene-D8M40_09100;Name=D8M40_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09100;pseudo=true RBME01000012.1 Protein Homology CDS 55677 56892 . + 0 ID=cds-D8M40_09100;Parent=gene-D8M40_09100;Note=programmed frameshift%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611981.1;locus_tag=D8M40_09100;product=IS3 family transposase;pseudo=true;transl_table=11 RBME01000012.1 Genbank gene 57251 57571 . - . ID=gene-D8M40_09105;Name=D8M40_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09105 RBME01000012.1 GeneMarkS+ CDS 57251 57571 . - 0 ID=cds-RUP88004.1;Parent=gene-D8M40_09105;Dbxref=NCBI_GP:RUP88004.1;Name=RUP88004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09105;product=hypothetical protein;protein_id=RUP88004.1;transl_table=11 RBME01000012.1 Genbank gene 57839 58384 . + . ID=gene-D8M40_09110;Name=D8M40_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09110 RBME01000012.1 Protein Homology CDS 57839 58384 . + 0 ID=cds-RUP88027.1;Parent=gene-D8M40_09110;Dbxref=NCBI_GP:RUP88027.1;Name=RUP88027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015381120.1;locus_tag=D8M40_09110;product=NAD(P)H-dependent oxidoreductase;protein_id=RUP88027.1;transl_table=11 RBME01000012.1 Genbank gene 58428 59609 . + . ID=gene-D8M40_09115;Name=D8M40_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09115 RBME01000012.1 Protein Homology CDS 58428 59609 . + 0 ID=cds-RUP88005.1;Parent=gene-D8M40_09115;Dbxref=NCBI_GP:RUP88005.1;Name=RUP88005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M40_09115;product=sensor histidine kinase;protein_id=RUP88005.1;transl_table=11 RBME01000012.1 Genbank gene 59627 60355 . + . ID=gene-D8M40_09120;Name=D8M40_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09120 RBME01000012.1 Protein Homology CDS 59627 60355 . + 0 ID=cds-RUP88006.1;Parent=gene-D8M40_09120;Dbxref=NCBI_GP:RUP88006.1;Name=RUP88006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120152.1;locus_tag=D8M40_09120;product=DNA-binding response regulator;protein_id=RUP88006.1;transl_table=11 RBME01000012.1 Genbank gene 60505 61437 . + . ID=gene-D8M40_09125;Name=D8M40_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09125 RBME01000012.1 Protein Homology CDS 60505 61437 . + 0 ID=cds-RUP88007.1;Parent=gene-D8M40_09125;Dbxref=NCBI_GP:RUP88007.1;Name=RUP88007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120153.1;locus_tag=D8M40_09125;product=ABC transporter ATP-binding protein;protein_id=RUP88007.1;transl_table=11 RBME01000012.1 Genbank gene 61441 62172 . + . ID=gene-D8M40_09130;Name=D8M40_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09130 RBME01000012.1 GeneMarkS+ CDS 61441 62172 . + 0 ID=cds-RUP88008.1;Parent=gene-D8M40_09130;Dbxref=NCBI_GP:RUP88008.1;Name=RUP88008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09130;product=ABC transporter permease;protein_id=RUP88008.1;transl_table=11 RBME01000012.1 Genbank gene 62327 63367 . - . ID=gene-D8M40_09135;Name=D8M40_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09135 RBME01000012.1 Protein Homology CDS 62327 63367 . - 0 ID=cds-RUP88009.1;Parent=gene-D8M40_09135;Dbxref=NCBI_GP:RUP88009.1;Name=RUP88009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120157.1;locus_tag=D8M40_09135;product=hypothetical protein;protein_id=RUP88009.1;transl_table=11 RBME01000012.1 Genbank gene 63540 64901 . + . ID=gene-D8M40_09140;Name=D8M40_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09140 RBME01000012.1 Protein Homology CDS 63540 64901 . + 0 ID=cds-RUP88010.1;Parent=gene-D8M40_09140;Dbxref=NCBI_GP:RUP88010.1;Name=RUP88010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M40_09140;product=MFS transporter;protein_id=RUP88010.1;transl_table=11 RBME01000012.1 Genbank gene 64929 65984 . - . ID=gene-D8M40_09145;Name=D8M40_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09145 RBME01000012.1 Protein Homology CDS 64929 65984 . - 0 ID=cds-RUP88011.1;Parent=gene-D8M40_09145;Dbxref=NCBI_GP:RUP88011.1;Name=RUP88011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120159.1;locus_tag=D8M40_09145;product=hypothetical protein;protein_id=RUP88011.1;transl_table=11 RBME01000012.1 Genbank gene 66105 66197 . + . ID=gene-D8M40_09150;Name=D8M40_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09150 RBME01000012.1 Protein Homology CDS 66105 66197 . + 0 ID=cds-RUP88012.1;Parent=gene-D8M40_09150;Dbxref=NCBI_GP:RUP88012.1;Name=RUP88012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017822299.1;locus_tag=D8M40_09150;product=hypothetical protein;protein_id=RUP88012.1;transl_table=11 RBME01000012.1 Genbank gene 66194 68212 . - . ID=gene-D8M40_09155;Name=D8M40_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09155 RBME01000012.1 Protein Homology CDS 66194 68212 . - 0 ID=cds-RUP88013.1;Parent=gene-D8M40_09155;Dbxref=NCBI_GP:RUP88013.1;Name=RUP88013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120160.1;locus_tag=D8M40_09155;product=BCCT family transporter;protein_id=RUP88013.1;transl_table=11 RBME01000012.1 Genbank gene 68505 70049 . + . ID=gene-D8M40_09160;Name=D8M40_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09160 RBME01000012.1 Protein Homology CDS 68505 70049 . + 0 ID=cds-RUP88014.1;Parent=gene-D8M40_09160;Dbxref=NCBI_GP:RUP88014.1;Name=RUP88014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120161.1;locus_tag=D8M40_09160;product=MFS transporter;protein_id=RUP88014.1;transl_table=11 RBME01000012.1 Genbank gene 70046 70741 . + . ID=gene-D8M40_09165;Name=D8M40_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09165 RBME01000012.1 Protein Homology CDS 70046 70741 . + 0 ID=cds-RUP88015.1;Parent=gene-D8M40_09165;Dbxref=NCBI_GP:RUP88015.1;Name=RUP88015.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M40_09165;product=TetR/AcrR family transcriptional regulator;protein_id=RUP88015.1;transl_table=11 RBME01000012.1 Genbank gene 71039 71284 . - . ID=gene-D8M40_09170;Name=D8M40_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09170 RBME01000012.1 Protein Homology CDS 71039 71284 . - 0 ID=cds-RUP88016.1;Parent=gene-D8M40_09170;Dbxref=NCBI_GP:RUP88016.1;Name=RUP88016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016456433.1;locus_tag=D8M40_09170;product=HNH endonuclease;protein_id=RUP88016.1;transl_table=11 RBME01000012.1 Genbank gene 71635 71958 . - . ID=gene-D8M40_09175;Name=D8M40_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09175 RBME01000012.1 Protein Homology CDS 71635 71958 . - 0 ID=cds-RUP88017.1;Parent=gene-D8M40_09175;Dbxref=NCBI_GP:RUP88017.1;Name=RUP88017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822402.1;locus_tag=D8M40_09175;product=hypothetical protein;protein_id=RUP88017.1;transl_table=11 RBME01000012.1 Genbank gene 72056 72535 . + . ID=gene-D8M40_09180;Name=D8M40_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09180 RBME01000012.1 GeneMarkS+ CDS 72056 72535 . + 0 ID=cds-RUP88018.1;Parent=gene-D8M40_09180;Dbxref=NCBI_GP:RUP88018.1;Name=RUP88018.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09180;product=hypothetical protein;protein_id=RUP88018.1;transl_table=11 RBME01000012.1 Genbank gene 72689 73150 . - . ID=gene-D8M40_09185;Name=D8M40_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09185 RBME01000012.1 Protein Homology CDS 72689 73150 . - 0 ID=cds-RUP88019.1;Parent=gene-D8M40_09185;Dbxref=NCBI_GP:RUP88019.1;Name=RUP88019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M40_09185;product=hypothetical protein;protein_id=RUP88019.1;transl_table=11 RBME01000012.1 Genbank pseudogene 73163 73479 . - . ID=gene-D8M40_09190;Name=D8M40_09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09190;pseudo=true RBME01000012.1 Protein Homology CDS 73163 73479 . - 0 ID=cds-D8M40_09190;Parent=gene-D8M40_09190;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M40_09190;product=transposase;pseudo=true;transl_table=11 RBME01000012.1 Genbank gene 73635 74177 . + . ID=gene-D8M40_09195;Name=D8M40_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09195 RBME01000012.1 GeneMarkS+ CDS 73635 74177 . + 0 ID=cds-RUP88020.1;Parent=gene-D8M40_09195;Dbxref=NCBI_GP:RUP88020.1;Name=RUP88020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09195;product=hypothetical protein;protein_id=RUP88020.1;transl_table=11 RBME01000012.1 Genbank pseudogene 74676 74801 . - . ID=gene-D8M40_09200;Name=D8M40_09200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09200;pseudo=true RBME01000012.1 Protein Homology CDS 74676 74801 . - 0 ID=cds-D8M40_09200;Parent=gene-D8M40_09200;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006287684.1;locus_tag=D8M40_09200;product=RepA protein;pseudo=true;transl_table=11 RBME01000012.1 Genbank pseudogene 74915 75211 . - . ID=gene-D8M40_09205;Name=D8M40_09205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09205;pseudo=true RBME01000012.1 Protein Homology CDS 74915 75211 . - 0 ID=cds-D8M40_09205;Parent=gene-D8M40_09205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558196.1;locus_tag=D8M40_09205;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000130.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000130.1 Genbank region 1 855 . + . ID=RBME01000130.1:1..855;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000130.1 Genbank gene 1 691 . + . ID=gene-D8M40_12135;Name=D8M40_12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12135;partial=true;start_range=.,1 RBME01000130.1 Protein Homology CDS 1 691 . + 1 ID=cds-RUP84847.1;Parent=gene-D8M40_12135;Dbxref=NCBI_GP:RUP84847.1;Name=RUP84847.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020296510.1;locus_tag=D8M40_12135;partial=true;product=acetolactate synthase 3 large subunit;protein_id=RUP84847.1;start_range=.,1;transl_table=11 RBME01000130.1 Genbank gene 694 855 . + . ID=gene-D8M40_12140;Name=ilvN;end_range=855,.;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=D8M40_12140;partial=true RBME01000130.1 Protein Homology CDS 694 855 . + 0 ID=cds-RUP84848.1;Parent=gene-D8M40_12140;Dbxref=NCBI_GP:RUP84848.1;Name=RUP84848.1;end_range=855,.;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005757070.1;locus_tag=D8M40_12140;partial=true;product=acetolactate synthase small subunit;protein_id=RUP84848.1;transl_table=11 ##sequence-region RBME01000131.1 1 850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000131.1 Genbank region 1 850 . + . ID=RBME01000131.1:1..850;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000131.1 Genbank gene 1 850 . + . ID=gene-D8M40_12145;Name=D8M40_12145;end_range=850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12145;partial=true;start_range=.,1 RBME01000131.1 Protein Homology CDS 1 850 . + 2 ID=cds-RUP84845.1;Parent=gene-D8M40_12145;Dbxref=NCBI_GP:RUP84845.1;Name=RUP84845.1;end_range=850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017850033.1;locus_tag=D8M40_12145;partial=true;product=PAS domain S-box protein;protein_id=RUP84845.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000132.1 1 849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000132.1 Genbank region 1 849 . + . ID=RBME01000132.1:1..849;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000132.1 Genbank gene 1 849 . + . ID=gene-D8M40_12150;Name=D8M40_12150;end_range=849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12150;partial=true;start_range=.,1 RBME01000132.1 Protein Homology CDS 1 849 . + 1 ID=cds-RUP84843.1;Parent=gene-D8M40_12150;Dbxref=NCBI_GP:RUP84843.1;Name=RUP84843.1;end_range=849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003438315.1;locus_tag=D8M40_12150;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP84843.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000133.1 1 845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000133.1 Genbank region 1 845 . + . ID=RBME01000133.1:1..845;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000133.1 Genbank gene 1 88 . - . ID=gene-D8M40_12155;Name=D8M40_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12155;partial=true;start_range=.,1 RBME01000133.1 Protein Homology CDS 1 88 . - 0 ID=cds-RUP84839.1;Parent=gene-D8M40_12155;Dbxref=NCBI_GP:RUP84839.1;Name=RUP84839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03979.12;locus_tag=D8M40_12155;partial=true;product=hypothetical protein;protein_id=RUP84839.1;start_range=.,1;transl_table=11 RBME01000133.1 Genbank gene 156 845 . - . ID=gene-D8M40_12160;Name=D8M40_12160;end_range=845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12160;partial=true RBME01000133.1 Protein Homology CDS 156 845 . - 0 ID=cds-RUP84840.1;Parent=gene-D8M40_12160;Dbxref=NCBI_GP:RUP84840.1;Name=RUP84840.1;end_range=845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014720188.1;locus_tag=D8M40_12160;partial=true;product=DNA primase;protein_id=RUP84840.1;transl_table=11 ##sequence-region RBME01000134.1 1 841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000134.1 Genbank region 1 841 . + . ID=RBME01000134.1:1..841;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000134.1 Genbank gene 55 765 . + . ID=gene-D8M40_12165;Name=D8M40_12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12165 RBME01000134.1 Protein Homology CDS 55 765 . + 0 ID=cds-RUP84836.1;Parent=gene-D8M40_12165;Dbxref=NCBI_GP:RUP84836.1;Name=RUP84836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1;locus_tag=D8M40_12165;product=IS6-like element IS1628 family transposase;protein_id=RUP84836.1;transl_table=11 ##sequence-region RBME01000135.1 1 840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000135.1 Genbank region 1 840 . + . ID=RBME01000135.1:1..840;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000135.1 Genbank gene 1 318 . - . ID=gene-D8M40_12170;Name=D8M40_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12170;partial=true;start_range=.,1 RBME01000135.1 Protein Homology CDS 1 318 . - 0 ID=cds-RUP84833.1;Parent=gene-D8M40_12170;Dbxref=NCBI_GP:RUP84833.1;Name=RUP84833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010167815.1;locus_tag=D8M40_12170;partial=true;product=DUF2059 domain-containing protein;protein_id=RUP84833.1;start_range=.,1;transl_table=11 RBME01000135.1 Genbank gene 450 840 . + . ID=gene-D8M40_12175;Name=D8M40_12175;end_range=840,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12175;partial=true RBME01000135.1 Protein Homology CDS 450 840 . + 0 ID=cds-RUP84834.1;Parent=gene-D8M40_12175;Dbxref=NCBI_GP:RUP84834.1;Name=RUP84834.1;end_range=840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017845070.1;locus_tag=D8M40_12175;partial=true;product=2OG-Fe(II) oxygenase;protein_id=RUP84834.1;transl_table=11 ##sequence-region RBME01000136.1 1 838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000136.1 Genbank region 1 838 . + . ID=RBME01000136.1:1..838;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000136.1 Genbank gene 1 827 . - . ID=gene-D8M40_12180;Name=D8M40_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12180;partial=true;start_range=.,1 RBME01000136.1 Protein Homology CDS 1 827 . - 0 ID=cds-RUP84724.1;Parent=gene-D8M40_12180;Dbxref=NCBI_GP:RUP84724.1;Name=RUP84724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004576120.1;locus_tag=D8M40_12180;partial=true;product=MFS transporter;protein_id=RUP84724.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000137.1 1 837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000137.1 Genbank region 1 837 . + . ID=RBME01000137.1:1..837;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000137.1 Genbank pseudogene 1 808 . - . ID=gene-D8M40_12185;Name=D8M40_12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12185;pseudo=true RBME01000137.1 Protein Homology CDS 1 808 . - 0 ID=cds-D8M40_12185;Parent=gene-D8M40_12185;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_252840.1;locus_tag=D8M40_12185;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 ##sequence-region RBME01000138.1 1 837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000138.1 Genbank region 1 837 . + . ID=RBME01000138.1:1..837;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000138.1 Genbank gene 1 279 . + . ID=gene-D8M40_12190;Name=D8M40_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12190;partial=true;start_range=.,1 RBME01000138.1 Protein Homology CDS 1 279 . + 0 ID=cds-RUP84719.1;Parent=gene-D8M40_12190;Dbxref=NCBI_GP:RUP84719.1;Name=RUP84719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003373421.1;locus_tag=D8M40_12190;partial=true;product=hypothetical protein;protein_id=RUP84719.1;start_range=.,1;transl_table=11 RBME01000138.1 Genbank gene 276 837 . + . ID=gene-D8M40_12195;Name=D8M40_12195;end_range=837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12195;partial=true RBME01000138.1 Protein Homology CDS 276 837 . + 0 ID=cds-RUP84720.1;Parent=gene-D8M40_12195;Dbxref=NCBI_GP:RUP84720.1;Name=RUP84720.1;end_range=837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003373423.1;locus_tag=D8M40_12195;partial=true;product=DUF3037 domain-containing protein;protein_id=RUP84720.1;transl_table=11 ##sequence-region RBME01000139.1 1 837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000139.1 Genbank region 1 837 . + . ID=RBME01000139.1:1..837;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000139.1 Genbank gene 1 291 . + . ID=gene-D8M40_12200;Name=D8M40_12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12200;partial=true;start_range=.,1 RBME01000139.1 Protein Homology CDS 1 291 . + 0 ID=cds-RUP84716.1;Parent=gene-D8M40_12200;Dbxref=NCBI_GP:RUP84716.1;Name=RUP84716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003190837.1;locus_tag=D8M40_12200;partial=true;product=DNA-binding response regulator;protein_id=RUP84716.1;start_range=.,1;transl_table=11 RBME01000139.1 Genbank gene 292 837 . + . ID=gene-D8M40_12205;Name=D8M40_12205;end_range=837,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12205;partial=true RBME01000139.1 Protein Homology CDS 292 837 . + 0 ID=cds-RUP84717.1;Parent=gene-D8M40_12205;Dbxref=NCBI_GP:RUP84717.1;Name=RUP84717.1;end_range=837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005787892.1;locus_tag=D8M40_12205;partial=true;product=two-component sensor histidine kinase;protein_id=RUP84717.1;transl_table=11 ##sequence-region RBME01000013.1 1 64220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000013.1 Genbank region 1 64220 . + . ID=RBME01000013.1:1..64220;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000013.1 Genbank gene 129 347 . - . ID=gene-D8M40_09210;Name=D8M40_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09210 RBME01000013.1 GeneMarkS+ CDS 129 347 . - 0 ID=cds-RUP87900.1;Parent=gene-D8M40_09210;Dbxref=NCBI_GP:RUP87900.1;Name=RUP87900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09210;product=hypothetical protein;protein_id=RUP87900.1;transl_table=11 RBME01000013.1 Genbank gene 583 1203 . + . ID=gene-D8M40_09215;Name=D8M40_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09215 RBME01000013.1 GeneMarkS+ CDS 583 1203 . + 0 ID=cds-RUP87901.1;Parent=gene-D8M40_09215;Dbxref=NCBI_GP:RUP87901.1;Name=RUP87901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09215;product=hypothetical protein;protein_id=RUP87901.1;transl_table=11 RBME01000013.1 Genbank gene 1778 2140 . - . ID=gene-D8M40_09220;Name=D8M40_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09220 RBME01000013.1 Protein Homology CDS 1778 2140 . - 0 ID=cds-RUP87902.1;Parent=gene-D8M40_09220;Dbxref=NCBI_GP:RUP87902.1;Name=RUP87902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M40_09220;product=hypothetical protein;protein_id=RUP87902.1;transl_table=11 RBME01000013.1 Genbank gene 2040 2564 . - . ID=gene-D8M40_09225;Name=D8M40_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09225 RBME01000013.1 Protein Homology CDS 2040 2564 . - 0 ID=cds-RUP87903.1;Parent=gene-D8M40_09225;Dbxref=NCBI_GP:RUP87903.1;Name=RUP87903.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=D8M40_09225;product=hypothetical protein;protein_id=RUP87903.1;transl_table=11 RBME01000013.1 Genbank gene 2601 2918 . - . ID=gene-D8M40_09230;Name=D8M40_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09230 RBME01000013.1 Protein Homology CDS 2601 2918 . - 0 ID=cds-RUP87904.1;Parent=gene-D8M40_09230;Dbxref=NCBI_GP:RUP87904.1;Name=RUP87904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120683.1;locus_tag=D8M40_09230;product=transposase;protein_id=RUP87904.1;transl_table=11 RBME01000013.1 Genbank gene 3545 3769 . - . ID=gene-D8M40_09235;Name=D8M40_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09235 RBME01000013.1 GeneMarkS+ CDS 3545 3769 . - 0 ID=cds-RUP87905.1;Parent=gene-D8M40_09235;Dbxref=NCBI_GP:RUP87905.1;Name=RUP87905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09235;product=hypothetical protein;protein_id=RUP87905.1;transl_table=11 RBME01000013.1 Genbank pseudogene 4077 4276 . - . ID=gene-D8M40_09240;Name=D8M40_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09240;pseudo=true RBME01000013.1 Protein Homology CDS 4077 4276 . - 0 ID=cds-D8M40_09240;Parent=gene-D8M40_09240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307246.1;locus_tag=D8M40_09240;product=ribbon-helix-helix protein%2C CopG family;pseudo=true;transl_table=11 RBME01000013.1 Genbank gene 4458 4748 . + . ID=gene-D8M40_09245;Name=D8M40_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09245 RBME01000013.1 GeneMarkS+ CDS 4458 4748 . + 0 ID=cds-RUP87906.1;Parent=gene-D8M40_09245;Dbxref=NCBI_GP:RUP87906.1;Name=RUP87906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09245;product=hypothetical protein;protein_id=RUP87906.1;transl_table=11 RBME01000013.1 Genbank gene 5056 5310 . + . ID=gene-D8M40_09250;Name=D8M40_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09250 RBME01000013.1 Protein Homology CDS 5056 5310 . + 0 ID=cds-RUP87907.1;Parent=gene-D8M40_09250;Dbxref=NCBI_GP:RUP87907.1;Name=RUP87907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839819.1;locus_tag=D8M40_09250;product=hypothetical protein;protein_id=RUP87907.1;transl_table=11 RBME01000013.1 Genbank gene 5605 7434 . + . ID=gene-D8M40_09255;Name=D8M40_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09255 RBME01000013.1 Protein Homology CDS 5605 7434 . + 0 ID=cds-RUP87908.1;Parent=gene-D8M40_09255;Dbxref=NCBI_GP:RUP87908.1;Name=RUP87908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120355.1;locus_tag=D8M40_09255;product=long-chain fatty acid--CoA ligase;protein_id=RUP87908.1;transl_table=11 RBME01000013.1 Genbank gene 7662 8345 . + . ID=gene-D8M40_09260;Name=D8M40_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09260 RBME01000013.1 Protein Homology CDS 7662 8345 . + 0 ID=cds-RUP87909.1;Parent=gene-D8M40_09260;Dbxref=NCBI_GP:RUP87909.1;Name=RUP87909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120356.1;locus_tag=D8M40_09260;product=hypothetical protein;protein_id=RUP87909.1;transl_table=11 RBME01000013.1 Genbank gene 8381 9421 . - . ID=gene-D8M40_09265;Name=D8M40_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09265 RBME01000013.1 Protein Homology CDS 8381 9421 . - 0 ID=cds-RUP87910.1;Parent=gene-D8M40_09265;Dbxref=NCBI_GP:RUP87910.1;Name=RUP87910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120357.1;locus_tag=D8M40_09265;product=DUF21 domain-containing protein;protein_id=RUP87910.1;transl_table=11 RBME01000013.1 Genbank gene 9425 10849 . - . ID=gene-D8M40_09270;Name=D8M40_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09270 RBME01000013.1 Protein Homology CDS 9425 10849 . - 0 ID=cds-RUP87911.1;Parent=gene-D8M40_09270;Dbxref=NCBI_GP:RUP87911.1;Name=RUP87911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120358.1;locus_tag=D8M40_09270;product=HlyC/CorC family transporter;protein_id=RUP87911.1;transl_table=11 RBME01000013.1 Genbank gene 11041 12252 . + . ID=gene-D8M40_09275;Name=D8M40_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09275 RBME01000013.1 Protein Homology CDS 11041 12252 . + 0 ID=cds-RUP87912.1;Parent=gene-D8M40_09275;Dbxref=NCBI_GP:RUP87912.1;Name=RUP87912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120359.1;locus_tag=D8M40_09275;product=coproporphyrinogen III oxidase;protein_id=RUP87912.1;transl_table=11 RBME01000013.1 Genbank gene 12252 13283 . + . ID=gene-D8M40_09280;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=D8M40_09280 RBME01000013.1 Protein Homology CDS 12252 13283 . + 0 ID=cds-RUP87913.1;Parent=gene-D8M40_09280;Dbxref=NCBI_GP:RUP87913.1;Name=RUP87913.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120360.1;locus_tag=D8M40_09280;product=heat-inducible transcriptional repressor HrcA;protein_id=RUP87913.1;transl_table=11 RBME01000013.1 Genbank gene 13422 14567 . + . ID=gene-D8M40_09285;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D8M40_09285 RBME01000013.1 Protein Homology CDS 13422 14567 . + 0 ID=cds-RUP87914.1;Parent=gene-D8M40_09285;Dbxref=NCBI_GP:RUP87914.1;Name=RUP87914.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120361.1;locus_tag=D8M40_09285;product=molecular chaperone DnaJ;protein_id=RUP87914.1;transl_table=11 RBME01000013.1 Genbank gene 14598 15338 . + . ID=gene-D8M40_09290;Name=D8M40_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09290 RBME01000013.1 Protein Homology CDS 14598 15338 . + 0 ID=cds-RUP87915.1;Parent=gene-D8M40_09290;Dbxref=NCBI_GP:RUP87915.1;Name=RUP87915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120362.1;locus_tag=D8M40_09290;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=RUP87915.1;transl_table=11 RBME01000013.1 Genbank gene 15437 17053 . - . ID=gene-D8M40_09295;Name=D8M40_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09295 RBME01000013.1 Protein Homology CDS 15437 17053 . - 0 ID=cds-RUP87916.1;Parent=gene-D8M40_09295;Dbxref=NCBI_GP:RUP87916.1;Name=RUP87916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189410.1;locus_tag=D8M40_09295;product=cytochrome c biogenesis protein DipZ;protein_id=RUP87916.1;transl_table=11 RBME01000013.1 Genbank gene 17281 17682 . + . ID=gene-D8M40_09300;Name=D8M40_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09300 RBME01000013.1 GeneMarkS+ CDS 17281 17682 . + 0 ID=cds-RUP87917.1;Parent=gene-D8M40_09300;Dbxref=NCBI_GP:RUP87917.1;Name=RUP87917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09300;product=hypothetical protein;protein_id=RUP87917.1;transl_table=11 RBME01000013.1 Genbank gene 17694 18275 . + . ID=gene-D8M40_09305;Name=D8M40_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09305 RBME01000013.1 Protein Homology CDS 17694 18275 . + 0 ID=cds-RUP87918.1;Parent=gene-D8M40_09305;Dbxref=NCBI_GP:RUP87918.1;Name=RUP87918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010268922.1;locus_tag=D8M40_09305;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP87918.1;transl_table=11 RBME01000013.1 Genbank gene 18268 19092 . + . ID=gene-D8M40_09310;Name=D8M40_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09310 RBME01000013.1 Protein Homology CDS 18268 19092 . + 0 ID=cds-RUP87919.1;Parent=gene-D8M40_09310;Dbxref=NCBI_GP:RUP87919.1;Name=RUP87919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10099.7;locus_tag=D8M40_09310;product=anti-sigma factor;protein_id=RUP87919.1;transl_table=11 RBME01000013.1 Genbank gene 19149 20135 . + . ID=gene-D8M40_09315;Name=D8M40_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09315 RBME01000013.1 Protein Homology CDS 19149 20135 . + 0 ID=cds-RUP87920.1;Parent=gene-D8M40_09315;Dbxref=NCBI_GP:RUP87920.1;Name=RUP87920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120367.1;locus_tag=D8M40_09315;product=PhoH family protein;protein_id=RUP87920.1;transl_table=11 RBME01000013.1 Genbank gene 20190 20828 . + . ID=gene-D8M40_09320;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D8M40_09320 RBME01000013.1 Protein Homology CDS 20190 20828 . + 0 ID=cds-RUP87921.1;Parent=gene-D8M40_09320;Dbxref=NCBI_GP:RUP87921.1;Name=RUP87921.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120368.1;locus_tag=D8M40_09320;product=rRNA maturation RNase YbeY;protein_id=RUP87921.1;transl_table=11 RBME01000013.1 Genbank gene 20877 21752 . + . ID=gene-D8M40_09325;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=D8M40_09325 RBME01000013.1 Protein Homology CDS 20877 21752 . + 0 ID=cds-RUP87951.1;Parent=gene-D8M40_09325;Dbxref=NCBI_GP:RUP87951.1;Name=RUP87951.1;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822350.1;locus_tag=D8M40_09325;product=pyridoxal kinase PdxY;protein_id=RUP87951.1;transl_table=11 RBME01000013.1 Genbank gene 21756 22682 . + . ID=gene-D8M40_09330;Name=D8M40_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09330 RBME01000013.1 Protein Homology CDS 21756 22682 . + 0 ID=cds-RUP87922.1;Parent=gene-D8M40_09330;Dbxref=NCBI_GP:RUP87922.1;Name=RUP87922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296049.1;locus_tag=D8M40_09330;product=GTPase Era;protein_id=RUP87922.1;transl_table=11 RBME01000013.1 Genbank gene 22686 23426 . + . ID=gene-D8M40_09335;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=D8M40_09335 RBME01000013.1 Protein Homology CDS 22686 23426 . + 0 ID=cds-RUP87923.1;Parent=gene-D8M40_09335;Dbxref=NCBI_GP:RUP87923.1;Name=RUP87923.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296048.1;locus_tag=D8M40_09335;product=DNA repair protein RecO;protein_id=RUP87923.1;transl_table=11 RBME01000013.1 Genbank gene 23488 24225 . + . ID=gene-D8M40_09340;Name=D8M40_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09340 RBME01000013.1 Protein Homology CDS 23488 24225 . + 0 ID=cds-RUP87924.1;Parent=gene-D8M40_09340;Dbxref=NCBI_GP:RUP87924.1;Name=RUP87924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120371.1;locus_tag=D8M40_09340;product=isoprenyl transferase;protein_id=RUP87924.1;transl_table=11 RBME01000013.1 Genbank gene 24222 25316 . + . ID=gene-D8M40_09345;Name=D8M40_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09345 RBME01000013.1 Protein Homology CDS 24222 25316 . + 0 ID=cds-RUP87925.1;Parent=gene-D8M40_09345;Dbxref=NCBI_GP:RUP87925.1;Name=RUP87925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120372.1;locus_tag=D8M40_09345;product=rubrerythrin family protein;protein_id=RUP87925.1;transl_table=11 RBME01000013.1 Genbank gene 25332 25772 . - . ID=gene-D8M40_09350;Name=D8M40_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09350 RBME01000013.1 Protein Homology CDS 25332 25772 . - 0 ID=cds-RUP87926.1;Parent=gene-D8M40_09350;Dbxref=NCBI_GP:RUP87926.1;Name=RUP87926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401490.1;locus_tag=D8M40_09350;product=transcriptional repressor;protein_id=RUP87926.1;transl_table=11 RBME01000013.1 Genbank gene 25786 26073 . - . ID=gene-D8M40_09355;Name=D8M40_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09355 RBME01000013.1 Protein Homology CDS 25786 26073 . - 0 ID=cds-RUP87927.1;Parent=gene-D8M40_09355;Dbxref=NCBI_GP:RUP87927.1;Name=RUP87927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278104.1;locus_tag=D8M40_09355;product=ArsR family transcriptional regulator;protein_id=RUP87927.1;transl_table=11 RBME01000013.1 Genbank gene 26411 27790 . + . ID=gene-D8M40_09360;Name=D8M40_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09360 RBME01000013.1 Protein Homology CDS 26411 27790 . + 0 ID=cds-RUP87928.1;Parent=gene-D8M40_09360;Dbxref=NCBI_GP:RUP87928.1;Name=RUP87928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822371.1;locus_tag=D8M40_09360;product=glycine--tRNA ligase;protein_id=RUP87928.1;transl_table=11 RBME01000013.1 Genbank gene 27819 28331 . + . ID=gene-D8M40_09365;Name=D8M40_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09365 RBME01000013.1 Protein Homology CDS 27819 28331 . + 0 ID=cds-RUP87929.1;Parent=gene-D8M40_09365;Dbxref=NCBI_GP:RUP87929.1;Name=RUP87929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822374.1;locus_tag=D8M40_09365;product=hypothetical protein;protein_id=RUP87929.1;transl_table=11 RBME01000013.1 Genbank gene 28328 30601 . - . ID=gene-D8M40_09370;Name=D8M40_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09370 RBME01000013.1 Protein Homology CDS 28328 30601 . - 0 ID=cds-RUP87930.1;Parent=gene-D8M40_09370;Dbxref=NCBI_GP:RUP87930.1;Name=RUP87930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04536.12;locus_tag=D8M40_09370;product=TPM domain-containing protein;protein_id=RUP87930.1;transl_table=11 RBME01000013.1 Genbank gene 30799 31428 . + . ID=gene-D8M40_09375;Name=D8M40_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09375 RBME01000013.1 Protein Homology CDS 30799 31428 . + 0 ID=cds-RUP87952.1;Parent=gene-D8M40_09375;Dbxref=NCBI_GP:RUP87952.1;Name=RUP87952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401484.1;locus_tag=D8M40_09375;product=YdcF family protein;protein_id=RUP87952.1;transl_table=11 RBME01000013.1 Genbank gene 31476 32804 . + . ID=gene-D8M40_09380;Name=D8M40_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09380 RBME01000013.1 Protein Homology CDS 31476 32804 . + 0 ID=cds-RUP87953.1;Parent=gene-D8M40_09380;Dbxref=NCBI_GP:RUP87953.1;Name=RUP87953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367403.1;locus_tag=D8M40_09380;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=RUP87953.1;transl_table=11 RBME01000013.1 Genbank gene 32846 34750 . + . ID=gene-D8M40_09385;Name=D8M40_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09385 RBME01000013.1 Protein Homology CDS 32846 34750 . + 0 ID=cds-RUP87931.1;Parent=gene-D8M40_09385;Dbxref=NCBI_GP:RUP87931.1;Name=RUP87931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190743.1;locus_tag=D8M40_09385;product=DNA primase;protein_id=RUP87931.1;transl_table=11 RBME01000013.1 Genbank pseudogene 34839 35665 . - . ID=gene-D8M40_09390;Name=D8M40_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09390;pseudo=true RBME01000013.1 Protein Homology CDS 34839 35665 . - 0 ID=cds-D8M40_09390;Parent=gene-D8M40_09390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887985.1;locus_tag=D8M40_09390;product=DUF3800 domain-containing protein;pseudo=true;transl_table=11 RBME01000013.1 Genbank gene 35853 36137 . - . ID=gene-D8M40_09395;Name=D8M40_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09395 RBME01000013.1 Protein Homology CDS 35853 36137 . - 0 ID=cds-RUP87932.1;Parent=gene-D8M40_09395;Dbxref=NCBI_GP:RUP87932.1;Name=RUP87932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849261.1;locus_tag=D8M40_09395;product=hypothetical protein;protein_id=RUP87932.1;transl_table=11 RBME01000013.1 Genbank gene 36210 37538 . - . ID=gene-D8M40_09400;Name=D8M40_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09400 RBME01000013.1 Protein Homology CDS 36210 37538 . - 0 ID=cds-RUP87933.1;Parent=gene-D8M40_09400;Dbxref=NCBI_GP:RUP87933.1;Name=RUP87933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531141.1;locus_tag=D8M40_09400;product=Fic family protein;protein_id=RUP87933.1;transl_table=11 RBME01000013.1 Genbank gene 37921 38394 . + . ID=gene-D8M40_09405;Name=D8M40_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09405 RBME01000013.1 Protein Homology CDS 37921 38394 . + 0 ID=cds-RUP87934.1;Parent=gene-D8M40_09405;Dbxref=NCBI_GP:RUP87934.1;Name=RUP87934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280005.1;locus_tag=D8M40_09405;product=hypothetical protein;protein_id=RUP87934.1;transl_table=11 RBME01000013.1 Genbank gene 38599 39525 . + . ID=gene-D8M40_09410;Name=D8M40_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09410 RBME01000013.1 Protein Homology CDS 38599 39525 . + 0 ID=cds-RUP87935.1;Parent=gene-D8M40_09410;Dbxref=NCBI_GP:RUP87935.1;Name=RUP87935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327340.1;locus_tag=D8M40_09410;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP87935.1;transl_table=11 RBME01000013.1 Genbank gene 39691 39766 . - . ID=gene-D8M40_09415;Name=D8M40_09415;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_09415 RBME01000013.1 tRNAscan-SE tRNA 39691 39766 . - . ID=rna-D8M40_09415;Parent=gene-D8M40_09415;anticodon=(pos:complement(39731..39733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09415;product=tRNA-Asn RBME01000013.1 tRNAscan-SE exon 39691 39766 . - . ID=exon-D8M40_09415-1;Parent=rna-D8M40_09415;anticodon=(pos:complement(39731..39733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09415;product=tRNA-Asn RBME01000013.1 Genbank gene 40069 41439 . + . ID=gene-D8M40_09420;Name=D8M40_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09420 RBME01000013.1 Protein Homology CDS 40069 41439 . + 0 ID=cds-RUP87954.1;Parent=gene-D8M40_09420;Dbxref=NCBI_GP:RUP87954.1;Name=RUP87954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019720.1;locus_tag=D8M40_09420;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=RUP87954.1;transl_table=11 RBME01000013.1 Genbank gene 41561 41637 . + . ID=gene-D8M40_09425;Name=D8M40_09425;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_09425 RBME01000013.1 tRNAscan-SE tRNA 41561 41637 . + . ID=rna-D8M40_09425;Parent=gene-D8M40_09425;anticodon=(pos:41595..41597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09425;product=tRNA-Met RBME01000013.1 tRNAscan-SE exon 41561 41637 . + . ID=exon-D8M40_09425-1;Parent=rna-D8M40_09425;anticodon=(pos:41595..41597);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09425;product=tRNA-Met RBME01000013.1 Genbank gene 41892 42953 . - . ID=gene-D8M40_09430;Name=D8M40_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09430 RBME01000013.1 Protein Homology CDS 41892 42953 . - 0 ID=cds-RUP87936.1;Parent=gene-D8M40_09430;Dbxref=NCBI_GP:RUP87936.1;Name=RUP87936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732252.1;locus_tag=D8M40_09430;product=hydroxyacid dehydrogenase;protein_id=RUP87936.1;transl_table=11 RBME01000013.1 Genbank gene 43431 43625 . + . ID=gene-D8M40_09435;Name=D8M40_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09435 RBME01000013.1 GeneMarkS+ CDS 43431 43625 . + 0 ID=cds-RUP87937.1;Parent=gene-D8M40_09435;Dbxref=NCBI_GP:RUP87937.1;Name=RUP87937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09435;product=hypothetical protein;protein_id=RUP87937.1;transl_table=11 RBME01000013.1 Genbank gene 44052 45635 . - . ID=gene-D8M40_09440;Name=D8M40_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09440 RBME01000013.1 Protein Homology CDS 44052 45635 . - 0 ID=cds-RUP87938.1;Parent=gene-D8M40_09440;Dbxref=NCBI_GP:RUP87938.1;Name=RUP87938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120386.1;locus_tag=D8M40_09440;product=glutamate--cysteine ligase;protein_id=RUP87938.1;transl_table=11 RBME01000013.1 Genbank gene 45772 46944 . + . ID=gene-D8M40_09445;Name=D8M40_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09445 RBME01000013.1 Protein Homology CDS 45772 46944 . + 0 ID=cds-RUP87939.1;Parent=gene-D8M40_09445;Dbxref=NCBI_GP:RUP87939.1;Name=RUP87939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13191.4;locus_tag=D8M40_09445;product=ATP-binding protein;protein_id=RUP87939.1;transl_table=11 RBME01000013.1 Genbank gene 46972 47481 . - . ID=gene-D8M40_09450;Name=D8M40_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09450 RBME01000013.1 Protein Homology CDS 46972 47481 . - 0 ID=cds-RUP87955.1;Parent=gene-D8M40_09450;Dbxref=NCBI_GP:RUP87955.1;Name=RUP87955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120387.1;locus_tag=D8M40_09450;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=RUP87955.1;transl_table=11 RBME01000013.1 Genbank gene 47572 47847 . - . ID=gene-D8M40_09455;Name=D8M40_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09455 RBME01000013.1 GeneMarkS+ CDS 47572 47847 . - 0 ID=cds-RUP87940.1;Parent=gene-D8M40_09455;Dbxref=NCBI_GP:RUP87940.1;Name=RUP87940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09455;product=hypothetical protein;protein_id=RUP87940.1;transl_table=11 RBME01000013.1 Genbank gene 48083 49447 . - . ID=gene-D8M40_09460;Name=D8M40_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09460 RBME01000013.1 Protein Homology CDS 48083 49447 . - 0 ID=cds-RUP87941.1;Parent=gene-D8M40_09460;Dbxref=NCBI_GP:RUP87941.1;Name=RUP87941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359977.1;locus_tag=D8M40_09460;product=citrate transporter;protein_id=RUP87941.1;transl_table=11 RBME01000013.1 Genbank gene 49537 50343 . + . ID=gene-D8M40_09465;Name=D8M40_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09465 RBME01000013.1 Protein Homology CDS 49537 50343 . + 0 ID=cds-RUP87942.1;Parent=gene-D8M40_09465;Dbxref=NCBI_GP:RUP87942.1;Name=RUP87942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120391.1;locus_tag=D8M40_09465;product=sulfite exporter TauE/SafE family protein;protein_id=RUP87942.1;transl_table=11 RBME01000013.1 Genbank gene 50420 51628 . + . ID=gene-D8M40_09470;Name=D8M40_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09470 RBME01000013.1 Protein Homology CDS 50420 51628 . + 0 ID=cds-RUP87943.1;Parent=gene-D8M40_09470;Dbxref=NCBI_GP:RUP87943.1;Name=RUP87943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02566.17%2CHMM:PF12697.5;locus_tag=D8M40_09470;product=OsmC family protein;protein_id=RUP87943.1;transl_table=11 RBME01000013.1 Genbank gene 51665 52468 . + . ID=gene-D8M40_09475;Name=D8M40_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09475 RBME01000013.1 Protein Homology CDS 51665 52468 . + 0 ID=cds-RUP87944.1;Parent=gene-D8M40_09475;Dbxref=NCBI_GP:RUP87944.1;Name=RUP87944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120393.1;locus_tag=D8M40_09475;product=enoyl-CoA hydratase;protein_id=RUP87944.1;transl_table=11 RBME01000013.1 Genbank gene 52568 53380 . + . ID=gene-D8M40_09480;Name=D8M40_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09480 RBME01000013.1 Protein Homology CDS 52568 53380 . + 0 ID=cds-RUP87956.1;Parent=gene-D8M40_09480;Dbxref=NCBI_GP:RUP87956.1;Name=RUP87956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849154.1;locus_tag=D8M40_09480;product=class A beta-lactamase-related serine hydrolase;protein_id=RUP87956.1;transl_table=11 RBME01000013.1 Genbank gene 53387 54316 . - . ID=gene-D8M40_09485;Name=D8M40_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09485 RBME01000013.1 Protein Homology CDS 53387 54316 . - 0 ID=cds-RUP87945.1;Parent=gene-D8M40_09485;Dbxref=NCBI_GP:RUP87945.1;Name=RUP87945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00756.18;locus_tag=D8M40_09485;product=hypothetical protein;protein_id=RUP87945.1;transl_table=11 RBME01000013.1 Genbank gene 54730 55263 . + . ID=gene-D8M40_09490;Name=D8M40_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09490 RBME01000013.1 GeneMarkS+ CDS 54730 55263 . + 0 ID=cds-RUP87946.1;Parent=gene-D8M40_09490;Dbxref=NCBI_GP:RUP87946.1;Name=RUP87946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09490;product=hypothetical protein;protein_id=RUP87946.1;transl_table=11 RBME01000013.1 Genbank gene 55260 55613 . - . ID=gene-D8M40_09495;Name=D8M40_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09495 RBME01000013.1 Protein Homology CDS 55260 55613 . - 0 ID=cds-RUP87947.1;Parent=gene-D8M40_09495;Dbxref=NCBI_GP:RUP87947.1;Name=RUP87947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;locus_tag=D8M40_09495;product=hypothetical protein;protein_id=RUP87947.1;transl_table=11 RBME01000013.1 Genbank gene 55997 59251 . + . ID=gene-D8M40_09500;Name=D8M40_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09500 RBME01000013.1 GeneMarkS+ CDS 55997 59251 . + 0 ID=cds-RUP87948.1;Parent=gene-D8M40_09500;Dbxref=NCBI_GP:RUP87948.1;Name=RUP87948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09500;product=VWA domain-containing protein;protein_id=RUP87948.1;transl_table=11 RBME01000013.1 Genbank gene 59473 60063 . - . ID=gene-D8M40_09505;Name=D8M40_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09505 RBME01000013.1 GeneMarkS+ CDS 59473 60063 . - 0 ID=cds-RUP87949.1;Parent=gene-D8M40_09505;Dbxref=NCBI_GP:RUP87949.1;Name=RUP87949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09505;product=hypothetical protein;protein_id=RUP87949.1;transl_table=11 RBME01000013.1 Genbank gene 60356 63049 . - . ID=gene-D8M40_09510;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=D8M40_09510 RBME01000013.1 Protein Homology CDS 60356 63049 . - 0 ID=cds-RUP87957.1;Parent=gene-D8M40_09510;Dbxref=NCBI_GP:RUP87957.1;Name=RUP87957.1;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117597.1;locus_tag=D8M40_09510;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=RUP87957.1;transl_table=11 RBME01000013.1 Genbank gene 63403 63846 . + . ID=gene-D8M40_09515;Name=D8M40_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09515 RBME01000013.1 Protein Homology CDS 63403 63846 . + 0 ID=cds-RUP87950.1;Parent=gene-D8M40_09515;Dbxref=NCBI_GP:RUP87950.1;Name=RUP87950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120400.1;locus_tag=D8M40_09515;product=DUF3052 domain-containing protein;protein_id=RUP87950.1;transl_table=11 RBME01000013.1 Genbank gene 63943 64015 . + . ID=gene-D8M40_09520;Name=D8M40_09520;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_09520 RBME01000013.1 tRNAscan-SE tRNA 63943 64015 . + . ID=rna-D8M40_09520;Parent=gene-D8M40_09520;anticodon=(pos:63976..63978);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09520;product=tRNA-Val RBME01000013.1 tRNAscan-SE exon 63943 64015 . + . ID=exon-D8M40_09520-1;Parent=rna-D8M40_09520;anticodon=(pos:63976..63978);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_09520;product=tRNA-Val ##sequence-region RBME01000140.1 1 832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000140.1 Genbank region 1 832 . + . ID=RBME01000140.1:1..832;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000140.1 Genbank gene 1 283 . + . ID=gene-D8M40_12210;Name=D8M40_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12210;partial=true;start_range=.,1 RBME01000140.1 Protein Homology CDS 1 283 . + 1 ID=cds-RUP84713.1;Parent=gene-D8M40_12210;Dbxref=NCBI_GP:RUP84713.1;Name=RUP84713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017477453.1;locus_tag=D8M40_12210;partial=true;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=RUP84713.1;start_range=.,1;transl_table=11 RBME01000140.1 Genbank gene 423 832 . + . ID=gene-D8M40_12215;Name=D8M40_12215;end_range=832,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12215;partial=true RBME01000140.1 Protein Homology CDS 423 832 . + 0 ID=cds-RUP84714.1;Parent=gene-D8M40_12215;Dbxref=NCBI_GP:RUP84714.1;Name=RUP84714.1;end_range=832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003175317.1;locus_tag=D8M40_12215;partial=true;product=PAS domain-containing protein;protein_id=RUP84714.1;transl_table=11 ##sequence-region RBME01000141.1 1 830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000141.1 Genbank region 1 830 . + . ID=RBME01000141.1:1..830;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000141.1 Genbank gene 1 329 . + . ID=gene-D8M40_12220;Name=D8M40_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12220;partial=true;start_range=.,1 RBME01000141.1 Protein Homology CDS 1 329 . + 2 ID=cds-RUP84597.1;Parent=gene-D8M40_12220;Dbxref=NCBI_GP:RUP84597.1;Name=RUP84597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010208337.1;locus_tag=D8M40_12220;partial=true;product=MFS transporter;protein_id=RUP84597.1;start_range=.,1;transl_table=11 RBME01000141.1 Genbank gene 389 830 . - . ID=gene-D8M40_12225;Name=D8M40_12225;end_range=830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12225;partial=true RBME01000141.1 Protein Homology CDS 389 830 . - 1 ID=cds-RUP84598.1;Parent=gene-D8M40_12225;Dbxref=NCBI_GP:RUP84598.1;Name=RUP84598.1;end_range=830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_791746.1;locus_tag=D8M40_12225;partial=true;product=pilus assembly protein PilZ;protein_id=RUP84598.1;transl_table=11 ##sequence-region RBME01000142.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000142.1 Genbank region 1 829 . + . ID=RBME01000142.1:1..829;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000142.1 Genbank gene 1 829 . - . ID=gene-D8M40_12230;Name=D8M40_12230;end_range=829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12230;partial=true;start_range=.,1 RBME01000142.1 Protein Homology CDS 1 829 . - 1 ID=cds-RUP84595.1;Parent=gene-D8M40_12230;Dbxref=NCBI_GP:RUP84595.1;Name=RUP84595.1;end_range=829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010448993.1;locus_tag=D8M40_12230;partial=true;product=phenylacetaldoxime dehydratase family protein;protein_id=RUP84595.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000143.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000143.1 Genbank region 1 828 . + . ID=RBME01000143.1:1..828;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000143.1 Genbank gene 1 828 . + . ID=gene-D8M40_12235;Name=D8M40_12235;end_range=828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12235;partial=true;start_range=.,1 RBME01000143.1 Protein Homology CDS 1 828 . + 1 ID=cds-RUP84592.1;Parent=gene-D8M40_12235;Dbxref=NCBI_GP:RUP84592.1;Name=RUP84592.1;end_range=828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_252812.1;locus_tag=D8M40_12235;partial=true;product=aldehyde dehydrogenase family protein;protein_id=RUP84592.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000144.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000144.1 Genbank region 1 828 . + . ID=RBME01000144.1:1..828;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000144.1 Genbank gene 273 828 . - . ID=gene-D8M40_12240;Name=D8M40_12240;end_range=828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12240;partial=true RBME01000144.1 Protein Homology CDS 273 828 . - 1 ID=cds-RUP84589.1;Parent=gene-D8M40_12240;Dbxref=NCBI_GP:RUP84589.1;Name=RUP84589.1;end_range=828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219752.1;locus_tag=D8M40_12240;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP84589.1;transl_table=11 ##sequence-region RBME01000145.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000145.1 Genbank region 1 827 . + . ID=RBME01000145.1:1..827;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000145.1 Genbank gene 1 554 . - . ID=gene-D8M40_12245;Name=algL;gbkey=Gene;gene=algL;gene_biotype=protein_coding;locus_tag=D8M40_12245;partial=true;start_range=.,1 RBME01000145.1 Protein Homology CDS 1 554 . - 0 ID=cds-RUP84586.1;Parent=gene-D8M40_12245;Dbxref=NCBI_GP:RUP84586.1;Name=RUP84586.1;Note=Depolymerizes alginate by cleaving the beta-1%2C4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export;gbkey=CDS;gene=algL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010212979.1;locus_tag=D8M40_12245;partial=true;product=mannuronate-specific alginate lyase;protein_id=RUP84586.1;start_range=.,1;transl_table=11 RBME01000145.1 Genbank gene 563 827 . - . ID=gene-D8M40_12250;Name=D8M40_12250;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12250;partial=true RBME01000145.1 Protein Homology CDS 563 827 . - 1 ID=cds-RUP84587.1;Parent=gene-D8M40_12250;Dbxref=NCBI_GP:RUP84587.1;Name=RUP84587.1;end_range=827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009047088.1;locus_tag=D8M40_12250;partial=true;product=alginate O-acetyltransferase;protein_id=RUP84587.1;transl_table=11 ##sequence-region RBME01000146.1 1 826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000146.1 Genbank region 1 826 . + . ID=RBME01000146.1:1..826;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000146.1 Genbank gene 1 323 . + . ID=gene-D8M40_12255;Name=D8M40_12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12255;partial=true;start_range=.,1 RBME01000146.1 GeneMarkS+ CDS 1 323 . + 2 ID=cds-RUP84491.1;Parent=gene-D8M40_12255;Dbxref=NCBI_GP:RUP84491.1;Name=RUP84491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12255;partial=true;product=hypothetical protein;protein_id=RUP84491.1;start_range=.,1;transl_table=11 RBME01000146.1 Genbank pseudogene 503 613 . - . ID=gene-D8M40_12260;Name=D8M40_12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12260;pseudo=true RBME01000146.1 Protein Homology CDS 503 613 . - 0 ID=cds-D8M40_12260;Parent=gene-D8M40_12260;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008011556.1;locus_tag=D8M40_12260;product=fructose-bisphosphate aldolase;pseudo=true;transl_table=11 ##sequence-region RBME01000147.1 1 826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000147.1 Genbank region 1 826 . + . ID=RBME01000147.1:1..826;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000147.1 Genbank gene 1 90 . - . ID=gene-D8M40_12265;Name=D8M40_12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12265;partial=true;start_range=.,1 RBME01000147.1 Protein Homology CDS 1 90 . - 0 ID=cds-RUP84487.1;Parent=gene-D8M40_12265;Dbxref=NCBI_GP:RUP84487.1;Name=RUP84487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003193279.1;locus_tag=D8M40_12265;partial=true;product=nitrite reductase (NAD(P)H) small subunit;protein_id=RUP84487.1;start_range=.,1;transl_table=11 RBME01000147.1 Genbank gene 87 826 . - . ID=gene-D8M40_12270;Name=D8M40_12270;end_range=826,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12270;partial=true RBME01000147.1 Protein Homology CDS 87 826 . - 2 ID=cds-RUP84488.1;Parent=gene-D8M40_12270;Dbxref=NCBI_GP:RUP84488.1;Name=RUP84488.1;end_range=826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007916393.1;locus_tag=D8M40_12270;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP84488.1;transl_table=11 ##sequence-region RBME01000148.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000148.1 Genbank region 1 825 . + . ID=RBME01000148.1:1..825;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000148.1 Genbank pseudogene 87 782 . - . ID=gene-D8M40_12275;Name=D8M40_12275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12275;pseudo=true RBME01000148.1 Protein Homology CDS 87 782 . - 0 ID=cds-D8M40_12275;Parent=gene-D8M40_12275;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017479309.1;locus_tag=D8M40_12275;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region RBME01000149.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000149.1 Genbank region 1 825 . + . ID=RBME01000149.1:1..825;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000149.1 Genbank gene 1 317 . - . ID=gene-D8M40_12280;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=D8M40_12280;partial=true;start_range=.,1 RBME01000149.1 Protein Homology CDS 1 317 . - 0 ID=cds-RUP84481.1;Parent=gene-D8M40_12280;Dbxref=NCBI_GP:RUP84481.1;Name=RUP84481.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001007035.1;locus_tag=D8M40_12280;partial=true;product=glutamine ABC transporter permease GlnP;protein_id=RUP84481.1;start_range=.,1;transl_table=11 RBME01000149.1 Genbank gene 348 825 . - . ID=gene-D8M40_12285;Name=glnH;end_range=825,.;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=D8M40_12285;partial=true RBME01000149.1 Protein Homology CDS 348 825 . - 1 ID=cds-RUP84482.1;Parent=gene-D8M40_12285;Dbxref=NCBI_GP:RUP84482.1;Name=RUP84482.1;Note=similar to periplasmic-binding component of ABC transporters;end_range=825,.;gbkey=CDS;gene=glnH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010446159.1;locus_tag=D8M40_12285;partial=true;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=RUP84482.1;transl_table=11 ##sequence-region RBME01000014.1 1 62920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000014.1 Genbank region 1 62920 . + . ID=RBME01000014.1:1..62920;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000014.1 Genbank gene 1015 1647 . - . ID=gene-D8M40_09525;Name=D8M40_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09525 RBME01000014.1 GeneMarkS+ CDS 1015 1647 . - 0 ID=cds-RUP87843.1;Parent=gene-D8M40_09525;Dbxref=NCBI_GP:RUP87843.1;Name=RUP87843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09525;product=hypothetical protein;protein_id=RUP87843.1;transl_table=11 RBME01000014.1 Genbank gene 1647 1859 . - . ID=gene-D8M40_09530;Name=D8M40_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09530 RBME01000014.1 GeneMarkS+ CDS 1647 1859 . - 0 ID=cds-RUP87844.1;Parent=gene-D8M40_09530;Dbxref=NCBI_GP:RUP87844.1;Name=RUP87844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09530;product=hypothetical protein;protein_id=RUP87844.1;transl_table=11 RBME01000014.1 Genbank gene 2373 2744 . + . ID=gene-D8M40_09535;Name=D8M40_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09535 RBME01000014.1 Protein Homology CDS 2373 2744 . + 0 ID=cds-RUP87845.1;Parent=gene-D8M40_09535;Dbxref=NCBI_GP:RUP87845.1;Name=RUP87845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120089.1;locus_tag=D8M40_09535;product=hypothetical protein;protein_id=RUP87845.1;transl_table=11 RBME01000014.1 Genbank gene 2786 3013 . - . ID=gene-D8M40_09540;Name=D8M40_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09540 RBME01000014.1 Protein Homology CDS 2786 3013 . - 0 ID=cds-RUP87846.1;Parent=gene-D8M40_09540;Dbxref=NCBI_GP:RUP87846.1;Name=RUP87846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M40_09540;product=hypothetical protein;protein_id=RUP87846.1;transl_table=11 RBME01000014.1 Genbank gene 3390 3617 . - . ID=gene-D8M40_09545;Name=D8M40_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09545 RBME01000014.1 Protein Homology CDS 3390 3617 . - 0 ID=cds-RUP87847.1;Parent=gene-D8M40_09545;Dbxref=NCBI_GP:RUP87847.1;Name=RUP87847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M40_09545;product=hypothetical protein;protein_id=RUP87847.1;transl_table=11 RBME01000014.1 Genbank gene 4272 5117 . - . ID=gene-D8M40_09550;Name=D8M40_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09550 RBME01000014.1 Protein Homology CDS 4272 5117 . - 0 ID=cds-RUP87848.1;Parent=gene-D8M40_09550;Dbxref=NCBI_GP:RUP87848.1;Name=RUP87848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11236.6;locus_tag=D8M40_09550;product=DUF3037 domain-containing protein;protein_id=RUP87848.1;transl_table=11 RBME01000014.1 Genbank gene 5120 5938 . - . ID=gene-D8M40_09555;Name=D8M40_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09555 RBME01000014.1 Protein Homology CDS 5120 5938 . - 0 ID=cds-RUP87849.1;Parent=gene-D8M40_09555;Dbxref=NCBI_GP:RUP87849.1;Name=RUP87849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768327.1;locus_tag=D8M40_09555;product=hypothetical protein;protein_id=RUP87849.1;transl_table=11 RBME01000014.1 Genbank pseudogene 6016 6377 . - . ID=gene-D8M40_09560;Name=D8M40_09560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09560;pseudo=true RBME01000014.1 Protein Homology CDS 6016 6377 . - 0 ID=cds-D8M40_09560;Parent=gene-D8M40_09560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291898.1;locus_tag=D8M40_09560;product=enterochelin esterase;pseudo=true;transl_table=11 RBME01000014.1 Genbank pseudogene 6437 6902 . + . ID=gene-D8M40_09565;Name=D8M40_09565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09565;pseudo=true RBME01000014.1 Protein Homology CDS 6437 6902 . + 0 ID=cds-D8M40_09565;Parent=gene-D8M40_09565;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325328.1;locus_tag=D8M40_09565;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000014.1 Genbank gene 6899 7915 . + . ID=gene-D8M40_09570;Name=D8M40_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09570 RBME01000014.1 Protein Homology CDS 6899 7915 . + 0 ID=cds-RUP87850.1;Parent=gene-D8M40_09570;Dbxref=NCBI_GP:RUP87850.1;Name=RUP87850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291893.1;locus_tag=D8M40_09570;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP87850.1;transl_table=11 RBME01000014.1 Genbank gene 8724 9110 . + . ID=gene-D8M40_09575;Name=D8M40_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09575 RBME01000014.1 GeneMarkS+ CDS 8724 9110 . + 0 ID=cds-RUP87851.1;Parent=gene-D8M40_09575;Dbxref=NCBI_GP:RUP87851.1;Name=RUP87851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09575;product=hypothetical protein;protein_id=RUP87851.1;transl_table=11 RBME01000014.1 Genbank pseudogene 9284 14195 . - . ID=gene-D8M40_09580;Name=D8M40_09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09580;pseudo=true RBME01000014.1 Protein Homology CDS 9284 14195 . - 0 ID=cds-D8M40_09580;Parent=gene-D8M40_09580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847254.1;locus_tag=D8M40_09580;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 RBME01000014.1 Genbank gene 14677 15621 . - . ID=gene-D8M40_09585;Name=D8M40_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09585 RBME01000014.1 Protein Homology CDS 14677 15621 . - 0 ID=cds-RUP87852.1;Parent=gene-D8M40_09585;Dbxref=NCBI_GP:RUP87852.1;Name=RUP87852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297241.1;locus_tag=D8M40_09585;product=Mrr restriction system protein;protein_id=RUP87852.1;transl_table=11 RBME01000014.1 Genbank gene 15793 16053 . + . ID=gene-D8M40_09590;Name=D8M40_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09590 RBME01000014.1 Protein Homology CDS 15793 16053 . + 0 ID=cds-RUP87886.1;Parent=gene-D8M40_09590;Dbxref=NCBI_GP:RUP87886.1;Name=RUP87886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295398.1;locus_tag=D8M40_09590;product=hypothetical protein;protein_id=RUP87886.1;transl_table=11 RBME01000014.1 Genbank gene 16075 18699 . + . ID=gene-D8M40_09595;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=D8M40_09595 RBME01000014.1 Protein Homology CDS 16075 18699 . + 0 ID=cds-RUP87853.1;Parent=gene-D8M40_09595;Dbxref=NCBI_GP:RUP87853.1;Name=RUP87853.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120110.1;locus_tag=D8M40_09595;product=DNA polymerase I;protein_id=RUP87853.1;transl_table=11 RBME01000014.1 Genbank gene 18703 20490 . - . ID=gene-D8M40_09600;Name=D8M40_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09600 RBME01000014.1 Protein Homology CDS 18703 20490 . - 0 ID=cds-RUP87854.1;Parent=gene-D8M40_09600;Dbxref=NCBI_GP:RUP87854.1;Name=RUP87854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019618561.1;locus_tag=D8M40_09600;product=siderophore-interacting protein;protein_id=RUP87854.1;transl_table=11 RBME01000014.1 Genbank gene 20554 22308 . - . ID=gene-D8M40_09605;Name=D8M40_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09605 RBME01000014.1 Protein Homology CDS 20554 22308 . - 0 ID=cds-RUP87855.1;Parent=gene-D8M40_09605;Dbxref=NCBI_GP:RUP87855.1;Name=RUP87855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189952.1;locus_tag=D8M40_09605;product=ABC transporter ATP-binding protein;protein_id=RUP87855.1;transl_table=11 RBME01000014.1 Genbank gene 22305 23261 . - . ID=gene-D8M40_09610;Name=D8M40_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09610 RBME01000014.1 Protein Homology CDS 22305 23261 . - 0 ID=cds-RUP87856.1;Parent=gene-D8M40_09610;Dbxref=NCBI_GP:RUP87856.1;Name=RUP87856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241617.1;locus_tag=D8M40_09610;product=ABC transporter permease;protein_id=RUP87856.1;transl_table=11 RBME01000014.1 Genbank gene 23251 24180 . - . ID=gene-D8M40_09615;Name=D8M40_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09615 RBME01000014.1 Protein Homology CDS 23251 24180 . - 0 ID=cds-RUP87857.1;Parent=gene-D8M40_09615;Dbxref=NCBI_GP:RUP87857.1;Name=RUP87857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120114.1;locus_tag=D8M40_09615;product=ABC transporter permease;protein_id=RUP87857.1;transl_table=11 RBME01000014.1 Genbank gene 24295 25890 . - . ID=gene-D8M40_09620;Name=D8M40_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09620 RBME01000014.1 Protein Homology CDS 24295 25890 . - 0 ID=cds-RUP87858.1;Parent=gene-D8M40_09620;Dbxref=NCBI_GP:RUP87858.1;Name=RUP87858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120115.1;locus_tag=D8M40_09620;product=ABC transporter substrate-binding protein;protein_id=RUP87858.1;transl_table=11 RBME01000014.1 Genbank gene 26466 27932 . + . ID=gene-D8M40_09625;Name=D8M40_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09625 RBME01000014.1 Protein Homology CDS 26466 27932 . + 0 ID=cds-RUP87859.1;Parent=gene-D8M40_09625;Dbxref=NCBI_GP:RUP87859.1;Name=RUP87859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769418.1;locus_tag=D8M40_09625;product=30S ribosomal protein S1;protein_id=RUP87859.1;transl_table=11 RBME01000014.1 Genbank gene 28049 28654 . + . ID=gene-D8M40_09630;Name=D8M40_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09630 RBME01000014.1 Protein Homology CDS 28049 28654 . + 0 ID=cds-RUP87860.1;Parent=gene-D8M40_09630;Dbxref=NCBI_GP:RUP87860.1;Name=RUP87860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120117.1;locus_tag=D8M40_09630;product=dephospho-CoA kinase;protein_id=RUP87860.1;transl_table=11 RBME01000014.1 Genbank gene 28754 30859 . + . ID=gene-D8M40_09635;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=D8M40_09635 RBME01000014.1 Protein Homology CDS 28754 30859 . + 0 ID=cds-RUP87861.1;Parent=gene-D8M40_09635;Dbxref=NCBI_GP:RUP87861.1;Name=RUP87861.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529319.1;locus_tag=D8M40_09635;product=excinuclease ABC subunit UvrB;protein_id=RUP87861.1;transl_table=11 RBME01000014.1 Genbank gene 31018 32292 . + . ID=gene-D8M40_09640;Name=D8M40_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09640 RBME01000014.1 Protein Homology CDS 31018 32292 . + 0 ID=cds-RUP87862.1;Parent=gene-D8M40_09640;Dbxref=NCBI_GP:RUP87862.1;Name=RUP87862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120119.1;locus_tag=D8M40_09640;product=acyl-CoA dehydrogenase;protein_id=RUP87862.1;transl_table=11 RBME01000014.1 Genbank gene 32361 33530 . + . ID=gene-D8M40_09645;Name=D8M40_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09645 RBME01000014.1 Protein Homology CDS 32361 33530 . + 0 ID=cds-RUP87863.1;Parent=gene-D8M40_09645;Dbxref=NCBI_GP:RUP87863.1;Name=RUP87863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120120.1;locus_tag=D8M40_09645;product=CoA transferase;protein_id=RUP87863.1;transl_table=11 RBME01000014.1 Genbank gene 33630 34100 . + . ID=gene-D8M40_09650;Name=D8M40_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09650 RBME01000014.1 Protein Homology CDS 33630 34100 . + 0 ID=cds-RUP87864.1;Parent=gene-D8M40_09650;Dbxref=NCBI_GP:RUP87864.1;Name=RUP87864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120121.1;locus_tag=D8M40_09650;product=universal stress protein;protein_id=RUP87864.1;transl_table=11 RBME01000014.1 Genbank gene 34122 34598 . + . ID=gene-D8M40_09655;Name=D8M40_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09655 RBME01000014.1 Protein Homology CDS 34122 34598 . + 0 ID=cds-RUP87865.1;Parent=gene-D8M40_09655;Dbxref=NCBI_GP:RUP87865.1;Name=RUP87865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120122.1;locus_tag=D8M40_09655;product=universal stress protein;protein_id=RUP87865.1;transl_table=11 RBME01000014.1 Genbank gene 34619 36898 . - . ID=gene-D8M40_09660;Name=D8M40_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09660 RBME01000014.1 Protein Homology CDS 34619 36898 . - 0 ID=cds-RUP87866.1;Parent=gene-D8M40_09660;Dbxref=NCBI_GP:RUP87866.1;Name=RUP87866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120123.1;locus_tag=D8M40_09660;product=helicase;protein_id=RUP87866.1;transl_table=11 RBME01000014.1 Genbank gene 36920 37771 . - . ID=gene-D8M40_09665;Name=D8M40_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09665 RBME01000014.1 Protein Homology CDS 36920 37771 . - 0 ID=cds-RUP87867.1;Parent=gene-D8M40_09665;Dbxref=NCBI_GP:RUP87867.1;Name=RUP87867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120124.1;locus_tag=D8M40_09665;product=DoxX family membrane protein;protein_id=RUP87867.1;transl_table=11 RBME01000014.1 Genbank gene 37964 38563 . - . ID=gene-D8M40_09670;Name=D8M40_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09670 RBME01000014.1 Protein Homology CDS 37964 38563 . - 0 ID=cds-RUP87868.1;Parent=gene-D8M40_09670;Dbxref=NCBI_GP:RUP87868.1;Name=RUP87868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120125.1;locus_tag=D8M40_09670;product=MBL fold metallo-hydrolase;protein_id=RUP87868.1;transl_table=11 RBME01000014.1 Genbank gene 38689 41532 . + . ID=gene-D8M40_09675;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=D8M40_09675 RBME01000014.1 Protein Homology CDS 38689 41532 . + 0 ID=cds-RUP87869.1;Parent=gene-D8M40_09675;Dbxref=NCBI_GP:RUP87869.1;Name=RUP87869.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120126.1;locus_tag=D8M40_09675;product=excinuclease ABC subunit UvrA;protein_id=RUP87869.1;transl_table=11 RBME01000014.1 Genbank gene 41835 42356 . + . ID=gene-D8M40_09680;Name=D8M40_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09680 RBME01000014.1 Protein Homology CDS 41835 42356 . + 0 ID=cds-RUP87870.1;Parent=gene-D8M40_09680;Dbxref=NCBI_GP:RUP87870.1;Name=RUP87870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840930.1;locus_tag=D8M40_09680;product=translation initiation factor IF-3;protein_id=RUP87870.1;transl_table=11 RBME01000014.1 Genbank gene 42389 42583 . + . ID=gene-D8M40_09685;Name=D8M40_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09685 RBME01000014.1 Protein Homology CDS 42389 42583 . + 0 ID=cds-RUP87871.1;Parent=gene-D8M40_09685;Dbxref=NCBI_GP:RUP87871.1;Name=RUP87871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851299.1;locus_tag=D8M40_09685;product=50S ribosomal protein L35;protein_id=RUP87871.1;transl_table=11 RBME01000014.1 Genbank gene 42642 43025 . + . ID=gene-D8M40_09690;Name=D8M40_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09690 RBME01000014.1 Protein Homology CDS 42642 43025 . + 0 ID=cds-RUP87872.1;Parent=gene-D8M40_09690;Dbxref=NCBI_GP:RUP87872.1;Name=RUP87872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600599.1;locus_tag=D8M40_09690;product=50S ribosomal protein L20;protein_id=RUP87872.1;transl_table=11 RBME01000014.1 Genbank gene 43141 43962 . + . ID=gene-D8M40_09695;Name=D8M40_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09695 RBME01000014.1 Protein Homology CDS 43141 43962 . + 0 ID=cds-RUP87873.1;Parent=gene-D8M40_09695;Dbxref=NCBI_GP:RUP87873.1;Name=RUP87873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022471.1;locus_tag=D8M40_09695;product=RNA methyltransferase;protein_id=RUP87873.1;transl_table=11 RBME01000014.1 Genbank gene 44126 45184 . + . ID=gene-D8M40_09700;Name=D8M40_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09700 RBME01000014.1 Protein Homology CDS 44126 45184 . + 0 ID=cds-RUP87874.1;Parent=gene-D8M40_09700;Dbxref=NCBI_GP:RUP87874.1;Name=RUP87874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022470.1;locus_tag=D8M40_09700;product=phenylalanine--tRNA ligase subunit alpha;protein_id=RUP87874.1;transl_table=11 RBME01000014.1 Genbank gene 45214 47718 . + . ID=gene-D8M40_09705;Name=D8M40_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09705 RBME01000014.1 Protein Homology CDS 45214 47718 . + 0 ID=cds-RUP87875.1;Parent=gene-D8M40_09705;Dbxref=NCBI_GP:RUP87875.1;Name=RUP87875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120132.1;locus_tag=D8M40_09705;product=phenylalanine--tRNA ligase subunit beta;protein_id=RUP87875.1;transl_table=11 RBME01000014.1 Genbank gene 47958 48986 . - . ID=gene-D8M40_09710;Name=D8M40_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09710 RBME01000014.1 Protein Homology CDS 47958 48986 . - 0 ID=cds-RUP87876.1;Parent=gene-D8M40_09710;Dbxref=NCBI_GP:RUP87876.1;Name=RUP87876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528121.1;locus_tag=D8M40_09710;product=ornithine cyclodeaminase;protein_id=RUP87876.1;transl_table=11 RBME01000014.1 Genbank gene 49093 50508 . - . ID=gene-D8M40_09715;Name=D8M40_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09715 RBME01000014.1 Protein Homology CDS 49093 50508 . - 0 ID=cds-RUP87887.1;Parent=gene-D8M40_09715;Dbxref=NCBI_GP:RUP87887.1;Name=RUP87887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280340.1;locus_tag=D8M40_09715;product=amino acid permease;protein_id=RUP87887.1;transl_table=11 RBME01000014.1 Genbank gene 51005 52024 . - . ID=gene-D8M40_09720;Name=D8M40_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09720 RBME01000014.1 Protein Homology CDS 51005 52024 . - 0 ID=cds-RUP87877.1;Parent=gene-D8M40_09720;Dbxref=NCBI_GP:RUP87877.1;Name=RUP87877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284191.1;locus_tag=D8M40_09720;product=formamidase;protein_id=RUP87877.1;transl_table=11 RBME01000014.1 Genbank gene 52177 53220 . + . ID=gene-D8M40_09725;Name=D8M40_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09725 RBME01000014.1 Protein Homology CDS 52177 53220 . + 0 ID=cds-RUP87878.1;Parent=gene-D8M40_09725;Dbxref=NCBI_GP:RUP87878.1;Name=RUP87878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120137.1;locus_tag=D8M40_09725;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=RUP87878.1;transl_table=11 RBME01000014.1 Genbank gene 53376 54524 . + . ID=gene-D8M40_09730;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=D8M40_09730 RBME01000014.1 Protein Homology CDS 53376 54524 . + 0 ID=cds-RUP87888.1;Parent=gene-D8M40_09730;Dbxref=NCBI_GP:RUP87888.1;Name=RUP87888.1;gbkey=CDS;gene=argJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019882.1;locus_tag=D8M40_09730;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=RUP87888.1;transl_table=11 RBME01000014.1 Genbank gene 54568 55503 . + . ID=gene-D8M40_09735;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=D8M40_09735 RBME01000014.1 Protein Homology CDS 54568 55503 . + 0 ID=cds-RUP87879.1;Parent=gene-D8M40_09735;Dbxref=NCBI_GP:RUP87879.1;Name=RUP87879.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282711.1;locus_tag=D8M40_09735;product=acetylglutamate kinase;protein_id=RUP87879.1;transl_table=11 RBME01000014.1 Genbank gene 55503 56672 . + . ID=gene-D8M40_09740;Name=D8M40_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09740 RBME01000014.1 Protein Homology CDS 55503 56672 . + 0 ID=cds-RUP87889.1;Parent=gene-D8M40_09740;Dbxref=NCBI_GP:RUP87889.1;Name=RUP87889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840939.1;locus_tag=D8M40_09740;product=acetylornithine transaminase;protein_id=RUP87889.1;transl_table=11 RBME01000014.1 Genbank gene 56681 57676 . + . ID=gene-D8M40_09745;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D8M40_09745 RBME01000014.1 Protein Homology CDS 56681 57676 . + 0 ID=cds-RUP87880.1;Parent=gene-D8M40_09745;Dbxref=NCBI_GP:RUP87880.1;Name=RUP87880.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600617.1;locus_tag=D8M40_09745;product=ornithine carbamoyltransferase;protein_id=RUP87880.1;transl_table=11 RBME01000014.1 Genbank gene 57673 58170 . + . ID=gene-D8M40_09750;Name=D8M40_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09750 RBME01000014.1 Protein Homology CDS 57673 58170 . + 0 ID=cds-RUP87881.1;Parent=gene-D8M40_09750;Dbxref=NCBI_GP:RUP87881.1;Name=RUP87881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017724.1;locus_tag=D8M40_09750;product=arginine repressor;protein_id=RUP87881.1;transl_table=11 RBME01000014.1 Genbank gene 58343 59545 . + . ID=gene-D8M40_09755;Name=D8M40_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09755 RBME01000014.1 Protein Homology CDS 58343 59545 . + 0 ID=cds-RUP87882.1;Parent=gene-D8M40_09755;Dbxref=NCBI_GP:RUP87882.1;Name=RUP87882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118570.1;locus_tag=D8M40_09755;product=argininosuccinate synthase;protein_id=RUP87882.1;transl_table=11 RBME01000014.1 Genbank gene 59545 60999 . + . ID=gene-D8M40_09760;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=D8M40_09760 RBME01000014.1 Protein Homology CDS 59545 60999 . + 0 ID=cds-RUP87883.1;Parent=gene-D8M40_09760;Dbxref=NCBI_GP:RUP87883.1;Name=RUP87883.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120144.1;locus_tag=D8M40_09760;product=argininosuccinate lyase;protein_id=RUP87883.1;transl_table=11 RBME01000014.1 Genbank gene 61009 61200 . + . ID=gene-D8M40_09765;Name=D8M40_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09765 RBME01000014.1 Protein Homology CDS 61009 61200 . + 0 ID=cds-RUP87884.1;Parent=gene-D8M40_09765;Dbxref=NCBI_GP:RUP87884.1;Name=RUP87884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600624.1;locus_tag=D8M40_09765;product=Trm112 family protein;protein_id=RUP87884.1;transl_table=11 RBME01000014.1 Genbank gene 61203 62468 . + . ID=gene-D8M40_09770;Name=D8M40_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09770 RBME01000014.1 Protein Homology CDS 61203 62468 . + 0 ID=cds-RUP87885.1;Parent=gene-D8M40_09770;Dbxref=NCBI_GP:RUP87885.1;Name=RUP87885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323249.1;locus_tag=D8M40_09770;product=tyrosine--tRNA ligase;protein_id=RUP87885.1;transl_table=11 ##sequence-region RBME01000150.1 1 821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000150.1 Genbank region 1 821 . + . ID=RBME01000150.1:1..821;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000150.1 Genbank gene 1 777 . - . ID=gene-D8M40_12290;Name=D8M40_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12290;partial=true;start_range=.,1 RBME01000150.1 Protein Homology CDS 1 777 . - 0 ID=cds-RUP84479.1;Parent=gene-D8M40_12290;Dbxref=NCBI_GP:RUP84479.1;Name=RUP84479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_790546.1;locus_tag=D8M40_12290;partial=true;product=geranyl transferase;protein_id=RUP84479.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000151.1 1 819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000151.1 Genbank region 1 819 . + . ID=RBME01000151.1:1..819;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000151.1 Genbank gene 1 819 . + . ID=gene-D8M40_12295;Name=motB;end_range=819,.;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=D8M40_12295;partial=true;start_range=.,1 RBME01000151.1 Protein Homology CDS 1 819 . + 2 ID=cds-RUP84385.1;Parent=gene-D8M40_12295;Dbxref=NCBI_GP:RUP84385.1;Name=RUP84385.1;end_range=819,.;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014716660.1;locus_tag=D8M40_12295;partial=true;product=motility protein MotB;protein_id=RUP84385.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000152.1 1 818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000152.1 Genbank region 1 818 . + . ID=RBME01000152.1:1..818;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000152.1 Genbank gene 1 818 . + . ID=gene-D8M40_12300;Name=D8M40_12300;end_range=818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12300;partial=true;start_range=.,1 RBME01000152.1 Protein Homology CDS 1 818 . + 2 ID=cds-RUP84383.1;Parent=gene-D8M40_12300;Dbxref=NCBI_GP:RUP84383.1;Name=RUP84383.1;end_range=818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015634934.1;locus_tag=D8M40_12300;partial=true;product=non-ribosomal peptide synthetase;protein_id=RUP84383.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000153.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000153.1 Genbank region 1 814 . + . ID=RBME01000153.1:1..814;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000153.1 Genbank gene 296 628 . + . ID=gene-D8M40_12305;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=D8M40_12305 RBME01000153.1 Protein Homology CDS 296 628 . + 0 ID=cds-RUP84380.1;Parent=gene-D8M40_12305;Dbxref=NCBI_GP:RUP84380.1;Name=RUP84380.1;gbkey=CDS;gene=cyaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008097793.1;locus_tag=D8M40_12305;product=iron donor protein CyaY;protein_id=RUP84380.1;transl_table=11 RBME01000153.1 Genbank gene 631 814 . + . ID=gene-D8M40_12310;Name=D8M40_12310;end_range=814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12310;partial=true RBME01000153.1 Protein Homology CDS 631 814 . + 0 ID=cds-RUP84381.1;Parent=gene-D8M40_12310;Dbxref=NCBI_GP:RUP84381.1;Name=RUP84381.1;end_range=814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003176868.1;locus_tag=D8M40_12310;partial=true;product=DUF1289 domain-containing protein;protein_id=RUP84381.1;transl_table=11 ##sequence-region RBME01000154.1 1 809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000154.1 Genbank region 1 809 . + . ID=RBME01000154.1:1..809;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000154.1 Genbank gene 1 640 . + . ID=gene-D8M40_12315;Name=D8M40_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12315;partial=true;start_range=.,1 RBME01000154.1 Protein Homology CDS 1 640 . + 1 ID=cds-RUP84378.1;Parent=gene-D8M40_12315;Dbxref=NCBI_GP:RUP84378.1;Name=RUP84378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253510.1;locus_tag=D8M40_12315;partial=true;product=asparaginase;protein_id=RUP84378.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000155.1 1 807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000155.1 Genbank region 1 807 . + . ID=RBME01000155.1:1..807;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000155.1 Genbank gene 1 162 . - . ID=gene-D8M40_12320;Name=D8M40_12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12320;partial=true;start_range=.,1 RBME01000155.1 Protein Homology CDS 1 162 . - 0 ID=cds-RUP84296.1;Parent=gene-D8M40_12320;Dbxref=NCBI_GP:RUP84296.1;Name=RUP84296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015886278.1;locus_tag=D8M40_12320;partial=true;product=TldD/PmbA family protein;protein_id=RUP84296.1;start_range=.,1;transl_table=11 RBME01000155.1 Genbank pseudogene 162 797 . - . ID=gene-D8M40_12325;Name=D8M40_12325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12325;pseudo=true RBME01000155.1 Protein Homology CDS 162 797 . - 0 ID=cds-D8M40_12325;Parent=gene-D8M40_12325;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_237832.1;locus_tag=D8M40_12325;product=TldD/PmbA family protein;pseudo=true;transl_table=11 ##sequence-region RBME01000156.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000156.1 Genbank region 1 805 . + . ID=RBME01000156.1:1..805;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000156.1 Genbank pseudogene 1 652 . - . ID=gene-D8M40_12330;Name=D8M40_12330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12330;pseudo=true RBME01000156.1 Protein Homology CDS 1 652 . - 0 ID=cds-D8M40_12330;Parent=gene-D8M40_12330;Note=internal stop%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010462112.1;locus_tag=D8M40_12330;product=LamB/YcsF family protein;pseudo=true;transl_table=11 ##sequence-region RBME01000157.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000157.1 Genbank region 1 805 . + . ID=RBME01000157.1:1..805;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000157.1 Genbank pseudogene 1 659 . - . ID=gene-D8M40_12335;Name=D8M40_12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12335;pseudo=true RBME01000157.1 Protein Homology CDS 1 659 . - 1 ID=cds-D8M40_12335;Parent=gene-D8M40_12335;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933612.1;locus_tag=D8M40_12335;product=PCRF domain-containing protein;pseudo=true;transl_table=11 ##sequence-region RBME01000158.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000158.1 Genbank region 1 803 . + . ID=RBME01000158.1:1..803;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000158.1 Genbank gene 1 523 . + . ID=gene-D8M40_12340;Name=D8M40_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12340;partial=true;start_range=.,1 RBME01000158.1 Protein Homology CDS 1 523 . + 1 ID=cds-RUP84292.1;Parent=gene-D8M40_12340;Dbxref=NCBI_GP:RUP84292.1;Name=RUP84292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010565284.1;locus_tag=D8M40_12340;partial=true;product=hypothetical protein;protein_id=RUP84292.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000159.1 1 803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000159.1 Genbank region 1 803 . + . ID=RBME01000159.1:1..803;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000159.1 Genbank gene 1 347 . + . ID=gene-D8M40_12345;Name=D8M40_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12345;partial=true;start_range=.,1 RBME01000159.1 Protein Homology CDS 1 347 . + 2 ID=cds-RUP84289.1;Parent=gene-D8M40_12345;Dbxref=NCBI_GP:RUP84289.1;Name=RUP84289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005792438.1;locus_tag=D8M40_12345;partial=true;product=argininosuccinate lyase;protein_id=RUP84289.1;start_range=.,1;transl_table=11 RBME01000159.1 Genbank gene 406 803 . - . ID=gene-D8M40_12350;Name=D8M40_12350;end_range=803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12350;partial=true RBME01000159.1 Protein Homology CDS 406 803 . - 2 ID=cds-RUP84290.1;Parent=gene-D8M40_12350;Dbxref=NCBI_GP:RUP84290.1;Name=RUP84290.1;end_range=803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014720449.1;locus_tag=D8M40_12350;partial=true;product=glutathione S-transferase;protein_id=RUP84290.1;transl_table=11 ##sequence-region RBME01000015.1 1 57287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000015.1 Genbank region 1 57287 . + . ID=RBME01000015.1:1..57287;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000015.1 Genbank gene 694 2298 . + . ID=gene-D8M40_09775;Name=D8M40_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09775 RBME01000015.1 Protein Homology CDS 694 2298 . + 0 ID=cds-RUP87780.1;Parent=gene-D8M40_09775;Dbxref=NCBI_GP:RUP87780.1;Name=RUP87780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120540.1;locus_tag=D8M40_09775;product=NYN domain-containing protein;protein_id=RUP87780.1;transl_table=11 RBME01000015.1 Genbank gene 2485 3273 . - . ID=gene-D8M40_09780;Name=D8M40_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09780 RBME01000015.1 Protein Homology CDS 2485 3273 . - 0 ID=cds-RUP87781.1;Parent=gene-D8M40_09780;Dbxref=NCBI_GP:RUP87781.1;Name=RUP87781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402092.1;locus_tag=D8M40_09780;product=PspA/IM30 family protein;protein_id=RUP87781.1;transl_table=11 RBME01000015.1 Genbank gene 3526 4413 . - . ID=gene-D8M40_09785;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=D8M40_09785 RBME01000015.1 Protein Homology CDS 3526 4413 . - 0 ID=cds-RUP87782.1;Parent=gene-D8M40_09785;Dbxref=NCBI_GP:RUP87782.1;Name=RUP87782.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013491904.1;locus_tag=D8M40_09785;product=succinate--CoA ligase subunit alpha;protein_id=RUP87782.1;transl_table=11 RBME01000015.1 Genbank gene 4432 5610 . - . ID=gene-D8M40_09790;Name=D8M40_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09790 RBME01000015.1 Protein Homology CDS 4432 5610 . - 0 ID=cds-RUP87783.1;Parent=gene-D8M40_09790;Dbxref=NCBI_GP:RUP87783.1;Name=RUP87783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847076.1;locus_tag=D8M40_09790;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=RUP87783.1;transl_table=11 RBME01000015.1 Genbank gene 5926 6303 . - . ID=gene-D8M40_09795;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D8M40_09795 RBME01000015.1 Protein Homology CDS 5926 6303 . - 0 ID=cds-RUP87784.1;Parent=gene-D8M40_09795;Dbxref=NCBI_GP:RUP87784.1;Name=RUP87784.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853131.1;locus_tag=D8M40_09795;product=thioredoxin;protein_id=RUP87784.1;transl_table=11 RBME01000015.1 Genbank gene 6494 7816 . - . ID=gene-D8M40_09800;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=D8M40_09800 RBME01000015.1 Protein Homology CDS 6494 7816 . - 0 ID=cds-RUP87823.1;Parent=gene-D8M40_09800;Dbxref=NCBI_GP:RUP87823.1;Name=RUP87823.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402099.1;locus_tag=D8M40_09800;product=replicative DNA helicase;protein_id=RUP87823.1;transl_table=11 RBME01000015.1 Genbank gene 8510 8731 . + . ID=gene-D8M40_09805;Name=D8M40_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09805 RBME01000015.1 GeneMarkS+ CDS 8510 8731 . + 0 ID=cds-RUP87785.1;Parent=gene-D8M40_09805;Dbxref=NCBI_GP:RUP87785.1;Name=RUP87785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09805;product=hypothetical protein;protein_id=RUP87785.1;transl_table=11 RBME01000015.1 Genbank gene 8947 9408 . - . ID=gene-D8M40_09810;Name=D8M40_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09810 RBME01000015.1 Protein Homology CDS 8947 9408 . - 0 ID=cds-RUP87786.1;Parent=gene-D8M40_09810;Dbxref=NCBI_GP:RUP87786.1;Name=RUP87786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846837.1;locus_tag=D8M40_09810;product=50S ribosomal protein L9;protein_id=RUP87786.1;transl_table=11 RBME01000015.1 Genbank gene 9507 10082 . - . ID=gene-D8M40_09815;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=D8M40_09815 RBME01000015.1 Protein Homology CDS 9507 10082 . - 0 ID=cds-RUP87787.1;Parent=gene-D8M40_09815;Dbxref=NCBI_GP:RUP87787.1;Name=RUP87787.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367826.1;locus_tag=D8M40_09815;product=single-stranded DNA-binding protein;protein_id=RUP87787.1;transl_table=11 RBME01000015.1 Genbank gene 10144 10440 . - . ID=gene-D8M40_09820;Name=D8M40_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09820 RBME01000015.1 Protein Homology CDS 10144 10440 . - 0 ID=cds-RUP87788.1;Parent=gene-D8M40_09820;Dbxref=NCBI_GP:RUP87788.1;Name=RUP87788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325941.1;locus_tag=D8M40_09820;product=30S ribosomal protein S6;protein_id=RUP87788.1;transl_table=11 RBME01000015.1 Genbank gene 10653 10844 . - . ID=gene-D8M40_09825;Name=D8M40_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09825 RBME01000015.1 Protein Homology CDS 10653 10844 . - 0 ID=cds-RUP87789.1;Parent=gene-D8M40_09825;Dbxref=NCBI_GP:RUP87789.1;Name=RUP87789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530928.1;locus_tag=D8M40_09825;product=hypothetical protein;protein_id=RUP87789.1;transl_table=11 RBME01000015.1 Genbank gene 10841 12397 . - . ID=gene-D8M40_09830;Name=D8M40_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09830 RBME01000015.1 Protein Homology CDS 10841 12397 . - 0 ID=cds-RUP87790.1;Parent=gene-D8M40_09830;Dbxref=NCBI_GP:RUP87790.1;Name=RUP87790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120550.1;locus_tag=D8M40_09830;product=DUF2029 domain-containing protein;protein_id=RUP87790.1;transl_table=11 RBME01000015.1 Genbank gene 12397 14691 . - . ID=gene-D8M40_09835;Name=D8M40_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09835 RBME01000015.1 Protein Homology CDS 12397 14691 . - 0 ID=cds-RUP87791.1;Parent=gene-D8M40_09835;Dbxref=NCBI_GP:RUP87791.1;Name=RUP87791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120551.1;locus_tag=D8M40_09835;product=penicillin-binding protein;protein_id=RUP87791.1;transl_table=11 RBME01000015.1 Genbank gene 14896 15984 . + . ID=gene-D8M40_09840;Name=D8M40_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09840 RBME01000015.1 Protein Homology CDS 14896 15984 . + 0 ID=cds-RUP87792.1;Parent=gene-D8M40_09840;Dbxref=NCBI_GP:RUP87792.1;Name=RUP87792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120552.1;locus_tag=D8M40_09840;product=inositol-3-phosphate synthase;protein_id=RUP87792.1;transl_table=11 RBME01000015.1 Genbank gene 15995 16450 . + . ID=gene-D8M40_09845;Name=D8M40_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09845 RBME01000015.1 Protein Homology CDS 15995 16450 . + 0 ID=cds-RUP87793.1;Parent=gene-D8M40_09845;Dbxref=NCBI_GP:RUP87793.1;Name=RUP87793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120553.1;locus_tag=D8M40_09845;product=MarR family transcriptional regulator;protein_id=RUP87793.1;transl_table=11 RBME01000015.1 Genbank gene 16456 17466 . + . ID=gene-D8M40_09850;Name=D8M40_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09850 RBME01000015.1 Protein Homology CDS 16456 17466 . + 0 ID=cds-RUP87794.1;Parent=gene-D8M40_09850;Dbxref=NCBI_GP:RUP87794.1;Name=RUP87794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120554.1;locus_tag=D8M40_09850;product=universal stress protein;protein_id=RUP87794.1;transl_table=11 RBME01000015.1 Genbank gene 17577 18044 . + . ID=gene-D8M40_09855;Name=D8M40_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09855 RBME01000015.1 GeneMarkS+ CDS 17577 18044 . + 0 ID=cds-RUP87795.1;Parent=gene-D8M40_09855;Dbxref=NCBI_GP:RUP87795.1;Name=RUP87795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09855;product=hypothetical protein;protein_id=RUP87795.1;transl_table=11 RBME01000015.1 Genbank gene 18100 19062 . - . ID=gene-D8M40_09860;Name=D8M40_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09860 RBME01000015.1 Protein Homology CDS 18100 19062 . - 0 ID=cds-RUP87796.1;Parent=gene-D8M40_09860;Dbxref=NCBI_GP:RUP87796.1;Name=RUP87796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120556.1;locus_tag=D8M40_09860;product=rhodanese-related sulfurtransferase;protein_id=RUP87796.1;transl_table=11 RBME01000015.1 Genbank gene 19213 20706 . - . ID=gene-D8M40_09865;Name=D8M40_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09865 RBME01000015.1 Protein Homology CDS 19213 20706 . - 0 ID=cds-RUP87797.1;Parent=gene-D8M40_09865;Dbxref=NCBI_GP:RUP87797.1;Name=RUP87797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120557.1;locus_tag=D8M40_09865;product=DUF1846 domain-containing protein;protein_id=RUP87797.1;transl_table=11 RBME01000015.1 Genbank gene 20833 21663 . + . ID=gene-D8M40_09870;Name=D8M40_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09870 RBME01000015.1 Protein Homology CDS 20833 21663 . + 0 ID=cds-RUP87798.1;Parent=gene-D8M40_09870;Dbxref=NCBI_GP:RUP87798.1;Name=RUP87798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120558.1;locus_tag=D8M40_09870;product=Fpg/Nei family DNA glycosylase;protein_id=RUP87798.1;transl_table=11 RBME01000015.1 Genbank gene 21720 23567 . + . ID=gene-D8M40_09875;Name=D8M40_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09875 RBME01000015.1 Protein Homology CDS 21720 23567 . + 0 ID=cds-RUP87799.1;Parent=gene-D8M40_09875;Dbxref=NCBI_GP:RUP87799.1;Name=RUP87799.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03853.13;locus_tag=D8M40_09875;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=RUP87799.1;transl_table=11 RBME01000015.1 Genbank gene 23656 23991 . - . ID=gene-D8M40_09880;Name=D8M40_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09880 RBME01000015.1 Protein Homology CDS 23656 23991 . - 0 ID=cds-RUP87824.1;Parent=gene-D8M40_09880;Dbxref=NCBI_GP:RUP87824.1;Name=RUP87824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006436816.1;locus_tag=D8M40_09880;product=hypothetical protein;protein_id=RUP87824.1;transl_table=11 RBME01000015.1 Genbank gene 24151 24582 . + . ID=gene-D8M40_09885;Name=D8M40_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09885 RBME01000015.1 GeneMarkS+ CDS 24151 24582 . + 0 ID=cds-RUP87800.1;Parent=gene-D8M40_09885;Dbxref=NCBI_GP:RUP87800.1;Name=RUP87800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09885;product=hypothetical protein;protein_id=RUP87800.1;transl_table=11 RBME01000015.1 Genbank gene 24664 26196 . - . ID=gene-D8M40_09890;Name=D8M40_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09890 RBME01000015.1 GeneMarkS+ CDS 24664 26196 . - 0 ID=cds-RUP87801.1;Parent=gene-D8M40_09890;Dbxref=NCBI_GP:RUP87801.1;Name=RUP87801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09890;product=hypothetical protein;protein_id=RUP87801.1;transl_table=11 RBME01000015.1 Genbank gene 26193 26918 . - . ID=gene-D8M40_09895;Name=D8M40_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09895 RBME01000015.1 Protein Homology CDS 26193 26918 . - 0 ID=cds-RUP87825.1;Parent=gene-D8M40_09895;Dbxref=NCBI_GP:RUP87825.1;Name=RUP87825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069218.1;locus_tag=D8M40_09895;product=ATP-binding cassette domain-containing protein;protein_id=RUP87825.1;transl_table=11 RBME01000015.1 Genbank gene 27060 27731 . - . ID=gene-D8M40_09900;Name=D8M40_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09900 RBME01000015.1 Protein Homology CDS 27060 27731 . - 0 ID=cds-RUP87802.1;Parent=gene-D8M40_09900;Dbxref=NCBI_GP:RUP87802.1;Name=RUP87802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120564.1;locus_tag=D8M40_09900;product=DNA-binding response regulator;protein_id=RUP87802.1;transl_table=11 RBME01000015.1 Genbank gene 27777 28997 . - . ID=gene-D8M40_09905;Name=D8M40_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09905 RBME01000015.1 Protein Homology CDS 27777 28997 . - 0 ID=cds-RUP87803.1;Parent=gene-D8M40_09905;Dbxref=NCBI_GP:RUP87803.1;Name=RUP87803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M40_09905;product=histidine kinase;protein_id=RUP87803.1;transl_table=11 RBME01000015.1 Genbank pseudogene 29379 29615 . + . ID=gene-D8M40_09910;Name=D8M40_09910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_09910;pseudo=true RBME01000015.1 Protein Homology CDS 29379 29615 . + 0 ID=cds-D8M40_09910;Parent=gene-D8M40_09910;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391499.1;locus_tag=D8M40_09910;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000015.1 Genbank gene 29630 30085 . + . ID=gene-D8M40_09915;Name=D8M40_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09915 RBME01000015.1 Protein Homology CDS 29630 30085 . + 0 ID=cds-RUP87826.1;Parent=gene-D8M40_09915;Dbxref=NCBI_GP:RUP87826.1;Name=RUP87826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391498.1;locus_tag=D8M40_09915;product=hypothetical protein;protein_id=RUP87826.1;transl_table=11 RBME01000015.1 Genbank gene 32326 32523 . - . ID=gene-D8M40_09920;Name=D8M40_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09920 RBME01000015.1 Protein Homology CDS 32326 32523 . - 0 ID=cds-RUP87804.1;Parent=gene-D8M40_09920;Dbxref=NCBI_GP:RUP87804.1;Name=RUP87804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=D8M40_09920;product=hypothetical protein;protein_id=RUP87804.1;transl_table=11 RBME01000015.1 Genbank gene 32806 33726 . - . ID=gene-D8M40_09925;Name=D8M40_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09925 RBME01000015.1 Protein Homology CDS 32806 33726 . - 0 ID=cds-RUP87805.1;Parent=gene-D8M40_09925;Dbxref=NCBI_GP:RUP87805.1;Name=RUP87805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327340.1;locus_tag=D8M40_09925;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP87805.1;transl_table=11 RBME01000015.1 Genbank gene 34522 34788 . + . ID=gene-D8M40_09930;Name=D8M40_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09930 RBME01000015.1 Protein Homology CDS 34522 34788 . + 0 ID=cds-RUP87806.1;Parent=gene-D8M40_09930;Dbxref=NCBI_GP:RUP87806.1;Name=RUP87806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008262866.1;locus_tag=D8M40_09930;product=hypothetical protein;protein_id=RUP87806.1;transl_table=11 RBME01000015.1 Genbank gene 34846 35424 . - . ID=gene-D8M40_09935;Name=D8M40_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09935 RBME01000015.1 GeneMarkS+ CDS 34846 35424 . - 0 ID=cds-RUP87807.1;Parent=gene-D8M40_09935;Dbxref=NCBI_GP:RUP87807.1;Name=RUP87807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09935;product=hypothetical protein;protein_id=RUP87807.1;transl_table=11 RBME01000015.1 Genbank gene 35762 36421 . - . ID=gene-D8M40_09940;Name=D8M40_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09940 RBME01000015.1 Protein Homology CDS 35762 36421 . - 0 ID=cds-RUP87808.1;Parent=gene-D8M40_09940;Dbxref=NCBI_GP:RUP87808.1;Name=RUP87808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120575.1;locus_tag=D8M40_09940;product=TrkA family potassium uptake protein;protein_id=RUP87808.1;transl_table=11 RBME01000015.1 Genbank gene 36414 37769 . - . ID=gene-D8M40_09945;Name=D8M40_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09945 RBME01000015.1 Protein Homology CDS 36414 37769 . - 0 ID=cds-RUP87809.1;Parent=gene-D8M40_09945;Dbxref=NCBI_GP:RUP87809.1;Name=RUP87809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120576.1;locus_tag=D8M40_09945;product=TrkH family potassium uptake protein;protein_id=RUP87809.1;transl_table=11 RBME01000015.1 Genbank gene 37824 38519 . - . ID=gene-D8M40_09950;Name=D8M40_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09950 RBME01000015.1 Protein Homology CDS 37824 38519 . - 0 ID=cds-RUP87810.1;Parent=gene-D8M40_09950;Dbxref=NCBI_GP:RUP87810.1;Name=RUP87810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120577.1;locus_tag=D8M40_09950;product=ABC transporter ATP-binding protein;protein_id=RUP87810.1;transl_table=11 RBME01000015.1 Genbank gene 38519 39679 . - . ID=gene-D8M40_09955;Name=D8M40_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09955 RBME01000015.1 Protein Homology CDS 38519 39679 . - 0 ID=cds-RUP87811.1;Parent=gene-D8M40_09955;Dbxref=NCBI_GP:RUP87811.1;Name=RUP87811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187925.1;locus_tag=D8M40_09955;product=ABC transporter permease;protein_id=RUP87811.1;transl_table=11 RBME01000015.1 Genbank gene 39928 41178 . + . ID=gene-D8M40_09960;Name=D8M40_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09960 RBME01000015.1 Protein Homology CDS 39928 41178 . + 0 ID=cds-RUP87827.1;Parent=gene-D8M40_09960;Dbxref=NCBI_GP:RUP87827.1;Name=RUP87827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280417.1;locus_tag=D8M40_09960;product=sensor histidine kinase;protein_id=RUP87827.1;transl_table=11 RBME01000015.1 Genbank gene 41194 41811 . + . ID=gene-D8M40_09965;Name=D8M40_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09965 RBME01000015.1 Protein Homology CDS 41194 41811 . + 0 ID=cds-RUP87812.1;Parent=gene-D8M40_09965;Dbxref=NCBI_GP:RUP87812.1;Name=RUP87812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120580.1;locus_tag=D8M40_09965;product=DNA-binding response regulator;protein_id=RUP87812.1;transl_table=11 RBME01000015.1 Genbank gene 41821 43542 . + . ID=gene-D8M40_09970;Name=D8M40_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09970 RBME01000015.1 Protein Homology CDS 41821 43542 . + 0 ID=cds-RUP87813.1;Parent=gene-D8M40_09970;Dbxref=NCBI_GP:RUP87813.1;Name=RUP87813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715369.1;locus_tag=D8M40_09970;product=FAD-binding dehydrogenase;protein_id=RUP87813.1;transl_table=11 RBME01000015.1 Genbank gene 43633 44310 . - . ID=gene-D8M40_09975;Name=D8M40_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09975 RBME01000015.1 Protein Homology CDS 43633 44310 . - 0 ID=cds-RUP87814.1;Parent=gene-D8M40_09975;Dbxref=NCBI_GP:RUP87814.1;Name=RUP87814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281531.1;locus_tag=D8M40_09975;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=RUP87814.1;transl_table=11 RBME01000015.1 Genbank gene 44336 44572 . - . ID=gene-D8M40_09980;Name=D8M40_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09980 RBME01000015.1 GeneMarkS+ CDS 44336 44572 . - 0 ID=cds-RUP87815.1;Parent=gene-D8M40_09980;Dbxref=NCBI_GP:RUP87815.1;Name=RUP87815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09980;product=hypothetical protein;protein_id=RUP87815.1;transl_table=11 RBME01000015.1 Genbank gene 44799 45086 . + . ID=gene-D8M40_09985;Name=D8M40_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09985 RBME01000015.1 Protein Homology CDS 44799 45086 . + 0 ID=cds-RUP87816.1;Parent=gene-D8M40_09985;Dbxref=NCBI_GP:RUP87816.1;Name=RUP87816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188337.1;locus_tag=D8M40_09985;product=prevent-host-death family protein;protein_id=RUP87816.1;transl_table=11 RBME01000015.1 Genbank gene 45360 45575 . + . ID=gene-D8M40_09990;Name=D8M40_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_09990 RBME01000015.1 GeneMarkS+ CDS 45360 45575 . + 0 ID=cds-RUP87817.1;Parent=gene-D8M40_09990;Dbxref=NCBI_GP:RUP87817.1;Name=RUP87817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_09990;product=hypothetical protein;protein_id=RUP87817.1;transl_table=11 RBME01000015.1 Genbank gene 45585 46430 . + . ID=gene-D8M40_09995;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=D8M40_09995 RBME01000015.1 Protein Homology CDS 45585 46430 . + 0 ID=cds-RUP87818.1;Parent=gene-D8M40_09995;Dbxref=NCBI_GP:RUP87818.1;Name=RUP87818.1;gbkey=CDS;gene=cobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120588.1;locus_tag=D8M40_09995;product=uroporphyrinogen-III C-methyltransferase;protein_id=RUP87818.1;transl_table=11 RBME01000015.1 Genbank gene 46390 47388 . - . ID=gene-D8M40_10000;Name=D8M40_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10000 RBME01000015.1 Protein Homology CDS 46390 47388 . - 0 ID=cds-RUP87819.1;Parent=gene-D8M40_10000;Dbxref=NCBI_GP:RUP87819.1;Name=RUP87819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120589.1;locus_tag=D8M40_10000;product=sulfite exporter TauE/SafE family protein;protein_id=RUP87819.1;transl_table=11 RBME01000015.1 Genbank gene 47397 48164 . - . ID=gene-D8M40_10005;Name=D8M40_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10005 RBME01000015.1 Protein Homology CDS 47397 48164 . - 0 ID=cds-RUP87820.1;Parent=gene-D8M40_10005;Dbxref=NCBI_GP:RUP87820.1;Name=RUP87820.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01903.15;locus_tag=D8M40_10005;product=sirohydrochlorin chelatase;protein_id=RUP87820.1;transl_table=11 RBME01000015.1 Genbank gene 48181 49443 . - . ID=gene-D8M40_10010;Name=D8M40_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10010 RBME01000015.1 Protein Homology CDS 48181 49443 . - 0 ID=cds-RUP87828.1;Parent=gene-D8M40_10010;Dbxref=NCBI_GP:RUP87828.1;Name=RUP87828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840490.1;locus_tag=D8M40_10010;product=sulfate adenylyltransferase;protein_id=RUP87828.1;transl_table=11 RBME01000015.1 Genbank gene 49497 50480 . - . ID=gene-D8M40_10015;Name=D8M40_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10015 RBME01000015.1 Protein Homology CDS 49497 50480 . - 0 ID=cds-RUP87830.1;Parent=gene-D8M40_10015;Dbxref=NCBI_GP:RUP87830.1;Name=RUP87830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005288216.1;locus_tag=D8M40_10015;product=sulfate adenylyltransferase subunit 2;protein_id=RUP87830.1;transl_table=11 RBME01000015.1 Genbank gene 50489 51283 . - . ID=gene-D8M40_10020;Name=D8M40_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10020 RBME01000015.1 Protein Homology CDS 50489 51283 . - 0 ID=cds-RUP87829.1;Parent=gene-D8M40_10020;Dbxref=NCBI_GP:RUP87829.1;Name=RUP87829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522674.1;locus_tag=D8M40_10020;product=phosphoadenylyl-sulfate reductase;protein_id=RUP87829.1;transl_table=11 RBME01000015.1 Genbank gene 51568 53250 . - . ID=gene-D8M40_10025;Name=D8M40_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10025 RBME01000015.1 Protein Homology CDS 51568 53250 . - 0 ID=cds-RUP87831.1;Parent=gene-D8M40_10025;Dbxref=NCBI_GP:RUP87831.1;Name=RUP87831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189208.1;locus_tag=D8M40_10025;product=nitrite/sulfite reductase;protein_id=RUP87831.1;transl_table=11 RBME01000015.1 Genbank gene 53704 55086 . + . ID=gene-D8M40_10030;Name=D8M40_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10030 RBME01000015.1 Protein Homology CDS 53704 55086 . + 0 ID=cds-RUP87832.1;Parent=gene-D8M40_10030;Dbxref=NCBI_GP:RUP87832.1;Name=RUP87832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322423.1;locus_tag=D8M40_10030;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=RUP87832.1;transl_table=11 RBME01000015.1 Genbank gene 55298 55651 . - . ID=gene-D8M40_10035;Name=D8M40_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10035 RBME01000015.1 GeneMarkS+ CDS 55298 55651 . - 0 ID=cds-RUP87821.1;Parent=gene-D8M40_10035;Dbxref=NCBI_GP:RUP87821.1;Name=RUP87821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10035;product=hypothetical protein;protein_id=RUP87821.1;transl_table=11 RBME01000015.1 Genbank gene 56270 56605 . - . ID=gene-D8M40_10040;Name=D8M40_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10040 RBME01000015.1 GeneMarkS+ CDS 56270 56605 . - 0 ID=cds-RUP87822.1;Parent=gene-D8M40_10040;Dbxref=NCBI_GP:RUP87822.1;Name=RUP87822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10040;product=hypothetical protein;protein_id=RUP87822.1;transl_table=11 RBME01000015.1 Genbank pseudogene 56741 57157 . + . ID=gene-D8M40_10045;Name=D8M40_10045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10045;pseudo=true RBME01000015.1 Protein Homology CDS 56741 57157 . + 0 ID=cds-D8M40_10045;Parent=gene-D8M40_10045;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005285127.1;locus_tag=D8M40_10045;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 ##sequence-region RBME01000160.1 1 802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000160.1 Genbank region 1 802 . + . ID=RBME01000160.1:1..802;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000160.1 Genbank gene 447 802 . + . ID=gene-D8M40_12355;Name=D8M40_12355;end_range=802,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12355;partial=true RBME01000160.1 Protein Homology CDS 447 802 . + 0 ID=cds-RUP84286.1;Parent=gene-D8M40_12355;Dbxref=NCBI_GP:RUP84286.1;Name=RUP84286.1;end_range=802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017137776.1;locus_tag=D8M40_12355;partial=true;product=hypothetical protein;protein_id=RUP84286.1;transl_table=11 ##sequence-region RBME01000161.1 1 800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000161.1 Genbank region 1 800 . + . ID=RBME01000161.1:1..800;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000161.1 Genbank gene 1 800 . + . ID=gene-D8M40_12360;Name=D8M40_12360;end_range=800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12360;partial=true;start_range=.,1 RBME01000161.1 Protein Homology CDS 1 800 . + 2 ID=cds-RUP84204.1;Parent=gene-D8M40_12360;Dbxref=NCBI_GP:RUP84204.1;Name=RUP84204.1;end_range=800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_237036.1;locus_tag=D8M40_12360;partial=true;product=tripartite tricarboxylate transporter permease;protein_id=RUP84204.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000162.1 1 800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000162.1 Genbank region 1 800 . + . ID=RBME01000162.1:1..800;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000162.1 Genbank gene 1 588 . - . ID=gene-D8M40_12365;Name=D8M40_12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12365;partial=true;start_range=.,1 RBME01000162.1 Protein Homology CDS 1 588 . - 0 ID=cds-RUP84201.1;Parent=gene-D8M40_12365;Dbxref=NCBI_GP:RUP84201.1;Name=RUP84201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010209244.1;locus_tag=D8M40_12365;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=RUP84201.1;start_range=.,1;transl_table=11 RBME01000162.1 Genbank gene 581 800 . - . ID=gene-D8M40_12370;Name=D8M40_12370;end_range=800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12370;partial=true RBME01000162.1 Protein Homology CDS 581 800 . - 1 ID=cds-RUP84202.1;Parent=gene-D8M40_12370;Dbxref=NCBI_GP:RUP84202.1;Name=RUP84202.1;end_range=800,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014719082.1;locus_tag=D8M40_12370;partial=true;product=SDR family oxidoreductase;protein_id=RUP84202.1;transl_table=11 ##sequence-region RBME01000163.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000163.1 Genbank region 1 798 . + . ID=RBME01000163.1:1..798;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000163.1 Genbank gene 1 156 . - . ID=gene-D8M40_12375;Name=D8M40_12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12375;partial=true;start_range=.,1 RBME01000163.1 Protein Homology CDS 1 156 . - 0 ID=cds-RUP84200.1;Parent=gene-D8M40_12375;Dbxref=NCBI_GP:RUP84200.1;Name=RUP84200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016972617.1;locus_tag=D8M40_12375;partial=true;product=phosphatidylserine decarboxylase;protein_id=RUP84200.1;start_range=.,1;transl_table=11 RBME01000163.1 Genbank gene 173 798 . - . ID=gene-D8M40_12380;Name=D8M40_12380;end_range=798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12380;partial=true RBME01000163.1 Protein Homology CDS 173 798 . - 2 ID=cds-RUP84199.1;Parent=gene-D8M40_12380;Dbxref=NCBI_GP:RUP84199.1;Name=RUP84199.1;end_range=798,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009046682.1;locus_tag=D8M40_12380;partial=true;product=sulfurtransferase;protein_id=RUP84199.1;transl_table=11 ##sequence-region RBME01000164.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000164.1 Genbank region 1 797 . + . ID=RBME01000164.1:1..797;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000164.1 Genbank gene 37 797 . - . ID=gene-D8M40_12385;Name=D8M40_12385;end_range=797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12385;partial=true RBME01000164.1 Protein Homology CDS 37 797 . - 2 ID=cds-RUP84198.1;Parent=gene-D8M40_12385;Dbxref=NCBI_GP:RUP84198.1;Name=RUP84198.1;end_range=797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003225904.1;locus_tag=D8M40_12385;partial=true;product=MFS transporter;protein_id=RUP84198.1;transl_table=11 ##sequence-region RBME01000165.1 1 797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000165.1 Genbank region 1 797 . + . ID=RBME01000165.1:1..797;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000165.1 Genbank gene 158 640 . + . ID=gene-D8M40_12390;Name=D8M40_12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12390 RBME01000165.1 Protein Homology CDS 158 640 . + 0 ID=cds-RUP84120.1;Parent=gene-D8M40_12390;Dbxref=NCBI_GP:RUP84120.1;Name=RUP84120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016704667.1;locus_tag=D8M40_12390;product=GNAT family N-acetyltransferase;protein_id=RUP84120.1;transl_table=11 RBME01000165.1 Genbank gene 654 797 . + . ID=gene-D8M40_12395;Name=D8M40_12395;end_range=797,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12395;partial=true RBME01000165.1 Protein Homology CDS 654 797 . + 0 ID=cds-RUP84121.1;Parent=gene-D8M40_12395;Dbxref=NCBI_GP:RUP84121.1;Name=RUP84121.1;end_range=797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016971813.1;locus_tag=D8M40_12395;partial=true;product=ester cyclase;protein_id=RUP84121.1;transl_table=11 ##sequence-region RBME01000166.1 1 795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000166.1 Genbank region 1 795 . + . ID=RBME01000166.1:1..795;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000166.1 Genbank gene 1 795 . + . ID=gene-D8M40_12400;Name=trpS;end_range=795,.;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D8M40_12400;partial=true;start_range=.,1 RBME01000166.1 Protein Homology CDS 1 795 . + 2 ID=cds-RUP84118.1;Parent=gene-D8M40_12400;Dbxref=NCBI_GP:RUP84118.1;Name=RUP84118.1;end_range=795,.;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020297570.1;locus_tag=D8M40_12400;partial=true;product=tryptophan--tRNA ligase;protein_id=RUP84118.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000167.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000167.1 Genbank region 1 793 . + . ID=RBME01000167.1:1..793;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000167.1 Genbank gene 1 793 . - . ID=gene-D8M40_12405;Name=D8M40_12405;end_range=793,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12405;partial=true;start_range=.,1 RBME01000167.1 Protein Homology CDS 1 793 . - 0 ID=cds-RUP84116.1;Parent=gene-D8M40_12405;Dbxref=NCBI_GP:RUP84116.1;Name=RUP84116.1;end_range=793,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973838.1;locus_tag=D8M40_12405;partial=true;product=diguanylate phosphodiesterase;protein_id=RUP84116.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000168.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000168.1 Genbank region 1 792 . + . ID=RBME01000168.1:1..792;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000168.1 Genbank gene 1 405 . + . ID=gene-D8M40_12410;Name=D8M40_12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12410;partial=true;start_range=.,1 RBME01000168.1 Protein Homology CDS 1 405 . + 0 ID=cds-RUP84114.1;Parent=gene-D8M40_12410;Dbxref=NCBI_GP:RUP84114.1;Name=RUP84114.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017136119.1;locus_tag=D8M40_12410;partial=true;product=Bcr/CflA family multidrug efflux transporter;protein_id=RUP84114.1;start_range=.,1;transl_table=11 RBME01000168.1 Genbank gene 421 792 . - . ID=gene-D8M40_12415;Name=D8M40_12415;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12415;partial=true RBME01000168.1 Protein Homology CDS 421 792 . - 0 ID=cds-RUP84115.1;Parent=gene-D8M40_12415;Dbxref=NCBI_GP:RUP84115.1;Name=RUP84115.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003189742.1;locus_tag=D8M40_12415;partial=true;product=nucleoside-binding protein;protein_id=RUP84115.1;transl_table=11 ##sequence-region RBME01000169.1 1 790 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000169.1 Genbank region 1 790 . + . ID=RBME01000169.1:1..790;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000169.1 Genbank gene 1 790 . - . ID=gene-D8M40_12420;Name=D8M40_12420;end_range=790,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12420;partial=true;start_range=.,1 RBME01000169.1 Protein Homology CDS 1 790 . - 1 ID=cds-RUP84046.1;Parent=gene-D8M40_12420;Dbxref=NCBI_GP:RUP84046.1;Name=RUP84046.1;end_range=790,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012723947.1;locus_tag=D8M40_12420;partial=true;product=alpha-1%2C4-glucan--maltose-1-phosphate maltosyltransferase;protein_id=RUP84046.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000016.1 1 50153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000016.1 Genbank region 1 50153 . + . ID=RBME01000016.1:1..50153;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000016.1 Genbank gene 1 342 . - . ID=gene-D8M40_10050;Name=D8M40_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10050;partial=true;start_range=.,1 RBME01000016.1 Protein Homology CDS 1 342 . - 0 ID=cds-RUP87771.1;Parent=gene-D8M40_10050;Dbxref=NCBI_GP:RUP87771.1;Name=RUP87771.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M40_10050;partial=true;product=hypothetical protein;protein_id=RUP87771.1;start_range=.,1;transl_table=11 RBME01000016.1 Genbank gene 346 576 . - . ID=gene-D8M40_10055;Name=D8M40_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10055 RBME01000016.1 Protein Homology CDS 346 576 . - 0 ID=cds-RUP87733.1;Parent=gene-D8M40_10055;Dbxref=NCBI_GP:RUP87733.1;Name=RUP87733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M40_10055;product=hypothetical protein;protein_id=RUP87733.1;transl_table=11 RBME01000016.1 Genbank gene 758 1075 . - . ID=gene-D8M40_10060;Name=D8M40_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10060 RBME01000016.1 GeneMarkS+ CDS 758 1075 . - 0 ID=cds-RUP87734.1;Parent=gene-D8M40_10060;Dbxref=NCBI_GP:RUP87734.1;Name=RUP87734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10060;product=hypothetical protein;protein_id=RUP87734.1;transl_table=11 RBME01000016.1 Genbank gene 1250 2824 . - . ID=gene-D8M40_10065;Name=D8M40_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10065 RBME01000016.1 Protein Homology CDS 1250 2824 . - 0 ID=cds-RUP87735.1;Parent=gene-D8M40_10065;Dbxref=NCBI_GP:RUP87735.1;Name=RUP87735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13166.4;locus_tag=D8M40_10065;product=hypothetical protein;protein_id=RUP87735.1;transl_table=11 RBME01000016.1 Genbank gene 2871 3458 . - . ID=gene-D8M40_10070;Name=D8M40_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10070 RBME01000016.1 Protein Homology CDS 2871 3458 . - 0 ID=cds-RUP87736.1;Parent=gene-D8M40_10070;Dbxref=NCBI_GP:RUP87736.1;Name=RUP87736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13166.4;locus_tag=D8M40_10070;product=hypothetical protein;protein_id=RUP87736.1;transl_table=11 RBME01000016.1 Genbank pseudogene 4179 5439 . - . ID=gene-D8M40_10075;Name=D8M40_10075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10075;pseudo=true RBME01000016.1 Protein Homology CDS 4179 5439 . - 0 ID=cds-D8M40_10075;Parent=gene-D8M40_10075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558150.1;locus_tag=D8M40_10075;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000016.1 Genbank gene 5689 6939 . - . ID=gene-D8M40_10080;Name=D8M40_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10080 RBME01000016.1 Protein Homology CDS 5689 6939 . - 0 ID=cds-RUP87772.1;Parent=gene-D8M40_10080;Dbxref=NCBI_GP:RUP87772.1;Name=RUP87772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011076067.1;locus_tag=D8M40_10080;product=LytR family transcriptional regulator;protein_id=RUP87772.1;transl_table=11 RBME01000016.1 Genbank gene 7437 8546 . - . ID=gene-D8M40_10085;Name=D8M40_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10085 RBME01000016.1 Protein Homology CDS 7437 8546 . - 0 ID=cds-RUP87737.1;Parent=gene-D8M40_10085;Dbxref=NCBI_GP:RUP87737.1;Name=RUP87737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121570.1;locus_tag=D8M40_10085;product=amidase;protein_id=RUP87737.1;transl_table=11 RBME01000016.1 Genbank gene 8543 8788 . - . ID=gene-D8M40_10090;Name=D8M40_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10090 RBME01000016.1 Protein Homology CDS 8543 8788 . - 0 ID=cds-RUP87738.1;Parent=gene-D8M40_10090;Dbxref=NCBI_GP:RUP87738.1;Name=RUP87738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121569.1;locus_tag=D8M40_10090;product=CopG family transcriptional regulator;protein_id=RUP87738.1;transl_table=11 RBME01000016.1 Genbank gene 8885 9757 . + . ID=gene-D8M40_10095;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=D8M40_10095 RBME01000016.1 Protein Homology CDS 8885 9757 . + 0 ID=cds-RUP87739.1;Parent=gene-D8M40_10095;Dbxref=NCBI_GP:RUP87739.1;Name=RUP87739.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121568.1;locus_tag=D8M40_10095;product=prephenate dehydratase;protein_id=RUP87739.1;transl_table=11 RBME01000016.1 Genbank gene 9794 10444 . + . ID=gene-D8M40_10100;Name=D8M40_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10100 RBME01000016.1 Protein Homology CDS 9794 10444 . + 0 ID=cds-RUP87740.1;Parent=gene-D8M40_10100;Dbxref=NCBI_GP:RUP87740.1;Name=RUP87740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822516.1;locus_tag=D8M40_10100;product=histidine phosphatase family protein;protein_id=RUP87740.1;transl_table=11 RBME01000016.1 Genbank gene 10459 10806 . - . ID=gene-D8M40_10105;Name=D8M40_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10105 RBME01000016.1 Protein Homology CDS 10459 10806 . - 0 ID=cds-RUP87741.1;Parent=gene-D8M40_10105;Dbxref=NCBI_GP:RUP87741.1;Name=RUP87741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847933.1;locus_tag=D8M40_10105;product=metallopeptidase family protein;protein_id=RUP87741.1;transl_table=11 RBME01000016.1 Genbank gene 10839 11861 . - . ID=gene-D8M40_10110;Name=D8M40_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10110 RBME01000016.1 Protein Homology CDS 10839 11861 . - 0 ID=cds-RUP87742.1;Parent=gene-D8M40_10110;Dbxref=NCBI_GP:RUP87742.1;Name=RUP87742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402049.1;locus_tag=D8M40_10110;product=hypothetical protein;protein_id=RUP87742.1;transl_table=11 RBME01000016.1 Genbank gene 11906 13156 . + . ID=gene-D8M40_10115;Name=D8M40_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10115 RBME01000016.1 Protein Homology CDS 11906 13156 . + 0 ID=cds-RUP87743.1;Parent=gene-D8M40_10115;Dbxref=NCBI_GP:RUP87743.1;Name=RUP87743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121564.1;locus_tag=D8M40_10115;product=serine--tRNA ligase;protein_id=RUP87743.1;transl_table=11 RBME01000016.1 Genbank gene 13153 14031 . + . ID=gene-D8M40_10120;Name=D8M40_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10120 RBME01000016.1 Protein Homology CDS 13153 14031 . + 0 ID=cds-RUP87744.1;Parent=gene-D8M40_10120;Dbxref=NCBI_GP:RUP87744.1;Name=RUP87744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121563.1;locus_tag=D8M40_10120;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RUP87744.1;transl_table=11 RBME01000016.1 Genbank gene 14028 14882 . + . ID=gene-D8M40_10125;Name=D8M40_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10125 RBME01000016.1 Protein Homology CDS 14028 14882 . + 0 ID=cds-RUP87745.1;Parent=gene-D8M40_10125;Dbxref=NCBI_GP:RUP87745.1;Name=RUP87745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121562.1;locus_tag=D8M40_10125;product=HAD family hydrolase;protein_id=RUP87745.1;transl_table=11 RBME01000016.1 Genbank gene 14890 16428 . + . ID=gene-D8M40_10130;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=D8M40_10130 RBME01000016.1 Protein Homology CDS 14890 16428 . + 0 ID=cds-RUP87746.1;Parent=gene-D8M40_10130;Dbxref=NCBI_GP:RUP87746.1;Name=RUP87746.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121561.1;locus_tag=D8M40_10130;product=glycerol kinase;protein_id=RUP87746.1;transl_table=11 RBME01000016.1 Genbank gene 16442 18538 . - . ID=gene-D8M40_10135;Name=D8M40_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10135 RBME01000016.1 Protein Homology CDS 16442 18538 . - 0 ID=cds-RUP87747.1;Parent=gene-D8M40_10135;Dbxref=NCBI_GP:RUP87747.1;Name=RUP87747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121560.1;locus_tag=D8M40_10135;product=hypothetical protein;protein_id=RUP87747.1;transl_table=11 RBME01000016.1 Genbank gene 18778 19968 . + . ID=gene-D8M40_10140;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=D8M40_10140 RBME01000016.1 Protein Homology CDS 18778 19968 . + 0 ID=cds-RUP87748.1;Parent=gene-D8M40_10140;Dbxref=NCBI_GP:RUP87748.1;Name=RUP87748.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529460.1;locus_tag=D8M40_10140;product=UDP-galactopyranose mutase;protein_id=RUP87748.1;transl_table=11 RBME01000016.1 Genbank gene 20056 22005 . + . ID=gene-D8M40_10145;Name=D8M40_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10145 RBME01000016.1 Protein Homology CDS 20056 22005 . + 0 ID=cds-RUP87749.1;Parent=gene-D8M40_10145;Dbxref=NCBI_GP:RUP87749.1;Name=RUP87749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325405.1;locus_tag=D8M40_10145;product=glycosyltransferase family 2 protein;protein_id=RUP87749.1;transl_table=11 RBME01000016.1 Genbank gene 21995 22501 . + . ID=gene-D8M40_10150;Name=D8M40_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10150 RBME01000016.1 Protein Homology CDS 21995 22501 . + 0 ID=cds-RUP87750.1;Parent=gene-D8M40_10150;Dbxref=NCBI_GP:RUP87750.1;Name=RUP87750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121557.1;locus_tag=D8M40_10150;product=phosphatase PAP2 family protein;protein_id=RUP87750.1;transl_table=11 RBME01000016.1 Genbank gene 22502 23506 . + . ID=gene-D8M40_10155;Name=D8M40_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10155 RBME01000016.1 Protein Homology CDS 22502 23506 . + 0 ID=cds-RUP87751.1;Parent=gene-D8M40_10155;Dbxref=NCBI_GP:RUP87751.1;Name=RUP87751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121556.1;locus_tag=D8M40_10155;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=RUP87751.1;transl_table=11 RBME01000016.1 Genbank gene 23665 24687 . + . ID=gene-D8M40_10160;Name=D8M40_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10160 RBME01000016.1 Protein Homology CDS 23665 24687 . + 0 ID=cds-RUP87752.1;Parent=gene-D8M40_10160;Dbxref=NCBI_GP:RUP87752.1;Name=RUP87752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121555.1;locus_tag=D8M40_10160;product=esterase family protein;protein_id=RUP87752.1;transl_table=11 RBME01000016.1 Genbank gene 25036 27036 . + . ID=gene-D8M40_10165;Name=D8M40_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10165 RBME01000016.1 Protein Homology CDS 25036 27036 . + 0 ID=cds-RUP87753.1;Parent=gene-D8M40_10165;Dbxref=NCBI_GP:RUP87753.1;Name=RUP87753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121554.1;locus_tag=D8M40_10165;product=hypothetical protein;protein_id=RUP87753.1;transl_table=11 RBME01000016.1 Genbank gene 27186 27716 . + . ID=gene-D8M40_10170;Name=D8M40_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10170 RBME01000016.1 GeneMarkS+ CDS 27186 27716 . + 0 ID=cds-RUP87754.1;Parent=gene-D8M40_10170;Dbxref=NCBI_GP:RUP87754.1;Name=RUP87754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10170;product=hypothetical protein;protein_id=RUP87754.1;transl_table=11 RBME01000016.1 Genbank gene 27765 28676 . + . ID=gene-D8M40_10175;Name=D8M40_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10175 RBME01000016.1 Protein Homology CDS 27765 28676 . + 0 ID=cds-RUP87755.1;Parent=gene-D8M40_10175;Dbxref=NCBI_GP:RUP87755.1;Name=RUP87755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121552.1;locus_tag=D8M40_10175;product=cutinase family protein;protein_id=RUP87755.1;transl_table=11 RBME01000016.1 Genbank gene 28940 30784 . + . ID=gene-D8M40_10180;Name=D8M40_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10180 RBME01000016.1 Protein Homology CDS 28940 30784 . + 0 ID=cds-RUP87756.1;Parent=gene-D8M40_10180;Dbxref=NCBI_GP:RUP87756.1;Name=RUP87756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121551.1;locus_tag=D8M40_10180;product=acyl-CoA synthase;protein_id=RUP87756.1;transl_table=11 RBME01000016.1 Genbank gene 30785 35701 . + . ID=gene-D8M40_10185;Name=D8M40_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10185 RBME01000016.1 Protein Homology CDS 30785 35701 . + 0 ID=cds-RUP87757.1;Parent=gene-D8M40_10185;Dbxref=NCBI_GP:RUP87757.1;Name=RUP87757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121550.1;locus_tag=D8M40_10185;product=alpha/beta fold hydrolase;protein_id=RUP87757.1;transl_table=11 RBME01000016.1 Genbank gene 35702 37246 . + . ID=gene-D8M40_10190;Name=D8M40_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10190 RBME01000016.1 Protein Homology CDS 35702 37246 . + 0 ID=cds-RUP87758.1;Parent=gene-D8M40_10190;Dbxref=NCBI_GP:RUP87758.1;Name=RUP87758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188576.1;locus_tag=D8M40_10190;product=acyl-CoA carboxylase subunit beta;protein_id=RUP87758.1;transl_table=11 RBME01000016.1 Genbank gene 37314 37694 . - . ID=gene-D8M40_10195;Name=D8M40_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10195 RBME01000016.1 Protein Homology CDS 37314 37694 . - 0 ID=cds-RUP87759.1;Parent=gene-D8M40_10195;Dbxref=NCBI_GP:RUP87759.1;Name=RUP87759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532314.1;locus_tag=D8M40_10195;product=hypothetical protein;protein_id=RUP87759.1;transl_table=11 RBME01000016.1 Genbank gene 37694 37903 . - . ID=gene-D8M40_10200;Name=D8M40_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10200 RBME01000016.1 Protein Homology CDS 37694 37903 . - 0 ID=cds-RUP87760.1;Parent=gene-D8M40_10200;Dbxref=NCBI_GP:RUP87760.1;Name=RUP87760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325312.1;locus_tag=D8M40_10200;product=ribonuclease PH;protein_id=RUP87760.1;transl_table=11 RBME01000016.1 Genbank gene 38144 38419 . - . ID=gene-D8M40_10205;Name=D8M40_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10205 RBME01000016.1 Protein Homology CDS 38144 38419 . - 0 ID=cds-RUP87761.1;Parent=gene-D8M40_10205;Dbxref=NCBI_GP:RUP87761.1;Name=RUP87761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836338.1;locus_tag=D8M40_10205;product=hypothetical protein;protein_id=RUP87761.1;transl_table=11 RBME01000016.1 Genbank gene 38831 39799 . + . ID=gene-D8M40_10210;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D8M40_10210 RBME01000016.1 Protein Homology CDS 38831 39799 . + 0 ID=cds-RUP87762.1;Parent=gene-D8M40_10210;Dbxref=NCBI_GP:RUP87762.1;Name=RUP87762.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121547.1;locus_tag=D8M40_10210;product=EamA family transporter RarD;protein_id=RUP87762.1;transl_table=11 RBME01000016.1 Genbank gene 39713 40111 . - . ID=gene-D8M40_10215;Name=D8M40_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10215 RBME01000016.1 Protein Homology CDS 39713 40111 . - 0 ID=cds-RUP87763.1;Parent=gene-D8M40_10215;Dbxref=NCBI_GP:RUP87763.1;Name=RUP87763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340173.1;locus_tag=D8M40_10215;product=DUF3054 domain-containing protein;protein_id=RUP87763.1;transl_table=11 RBME01000016.1 Genbank gene 40117 41154 . - . ID=gene-D8M40_10220;Name=D8M40_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10220 RBME01000016.1 Protein Homology CDS 40117 41154 . - 0 ID=cds-RUP87764.1;Parent=gene-D8M40_10220;Dbxref=NCBI_GP:RUP87764.1;Name=RUP87764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822551.1;locus_tag=D8M40_10220;product=UPF0104 family protein;protein_id=RUP87764.1;transl_table=11 RBME01000016.1 Genbank gene 41169 43562 . - . ID=gene-D8M40_10225;Name=D8M40_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10225 RBME01000016.1 Protein Homology CDS 41169 43562 . - 0 ID=cds-RUP87765.1;Parent=gene-D8M40_10225;Dbxref=NCBI_GP:RUP87765.1;Name=RUP87765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121544.1;locus_tag=D8M40_10225;product=MMPL family transporter;protein_id=RUP87765.1;transl_table=11 RBME01000016.1 Genbank gene 43571 44230 . - . ID=gene-D8M40_10230;Name=D8M40_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10230 RBME01000016.1 Protein Homology CDS 43571 44230 . - 0 ID=cds-RUP87766.1;Parent=gene-D8M40_10230;Dbxref=NCBI_GP:RUP87766.1;Name=RUP87766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359435.1;locus_tag=D8M40_10230;product=NYN domain-containing protein;protein_id=RUP87766.1;transl_table=11 RBME01000016.1 Genbank gene 44362 45147 . - . ID=gene-D8M40_10235;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=D8M40_10235 RBME01000016.1 Protein Homology CDS 44362 45147 . - 0 ID=cds-RUP87773.1;Parent=gene-D8M40_10235;Dbxref=NCBI_GP:RUP87773.1;Name=RUP87773.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188584.1;locus_tag=D8M40_10235;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=RUP87773.1;transl_table=11 RBME01000016.1 Genbank gene 45425 47257 . + . ID=gene-D8M40_10240;Name=D8M40_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10240 RBME01000016.1 Protein Homology CDS 45425 47257 . + 0 ID=cds-RUP87767.1;Parent=gene-D8M40_10240;Dbxref=NCBI_GP:RUP87767.1;Name=RUP87767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279757.1;locus_tag=D8M40_10240;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=RUP87767.1;transl_table=11 RBME01000016.1 Genbank gene 47502 47843 . + . ID=gene-D8M40_10245;Name=D8M40_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10245 RBME01000016.1 GeneMarkS+ CDS 47502 47843 . + 0 ID=cds-RUP87768.1;Parent=gene-D8M40_10245;Dbxref=NCBI_GP:RUP87768.1;Name=RUP87768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10245;product=hypothetical protein;protein_id=RUP87768.1;transl_table=11 RBME01000016.1 Genbank gene 48184 48486 . + . ID=gene-D8M40_10250;Name=D8M40_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10250 RBME01000016.1 GeneMarkS+ CDS 48184 48486 . + 0 ID=cds-RUP87769.1;Parent=gene-D8M40_10250;Dbxref=NCBI_GP:RUP87769.1;Name=RUP87769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10250;product=hypothetical protein;protein_id=RUP87769.1;transl_table=11 RBME01000016.1 Genbank gene 48492 49265 . - . ID=gene-D8M40_10255;Name=D8M40_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10255 RBME01000016.1 Protein Homology CDS 48492 49265 . - 0 ID=cds-RUP87770.1;Parent=gene-D8M40_10255;Dbxref=NCBI_GP:RUP87770.1;Name=RUP87770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768945.1;locus_tag=D8M40_10255;product=class I SAM-dependent methyltransferase;protein_id=RUP87770.1;transl_table=11 ##sequence-region RBME01000170.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000170.1 Genbank region 1 784 . + . ID=RBME01000170.1:1..784;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000170.1 Genbank gene 1 149 . + . ID=gene-D8M40_12425;Name=D8M40_12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12425;partial=true;start_range=.,1 RBME01000170.1 Protein Homology CDS 1 149 . + 2 ID=cds-RUP84044.1;Parent=gene-D8M40_12425;Dbxref=NCBI_GP:RUP84044.1;Name=RUP84044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016972496.1;locus_tag=D8M40_12425;partial=true;product=pilus assembly protein;protein_id=RUP84044.1;start_range=.,1;transl_table=11 RBME01000170.1 Genbank gene 146 784 . + . ID=gene-D8M40_12430;Name=D8M40_12430;end_range=784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12430;partial=true RBME01000170.1 Protein Homology CDS 146 784 . + 0 ID=cds-RUP84045.1;Parent=gene-D8M40_12430;Dbxref=NCBI_GP:RUP84045.1;Name=RUP84045.1;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016972497.1;locus_tag=D8M40_12430;partial=true;product=PAS domain-containing sensor histidine kinase;protein_id=RUP84045.1;transl_table=11 ##sequence-region RBME01000171.1 1 784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000171.1 Genbank region 1 784 . + . ID=RBME01000171.1:1..784;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000171.1 Genbank gene 240 784 . - . ID=gene-D8M40_12435;Name=D8M40_12435;end_range=784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12435;partial=true RBME01000171.1 Protein Homology CDS 240 784 . - 2 ID=cds-RUP84043.1;Parent=gene-D8M40_12435;Dbxref=NCBI_GP:RUP84043.1;Name=RUP84043.1;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017527034.1;locus_tag=D8M40_12435;partial=true;product=dihydrolipoyl dehydrogenase;protein_id=RUP84043.1;transl_table=11 ##sequence-region RBME01000172.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000172.1 Genbank region 1 783 . + . ID=RBME01000172.1:1..783;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000172.1 Genbank gene 1 239 . + . ID=gene-D8M40_12440;Name=D8M40_12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12440;partial=true;start_range=.,1 RBME01000172.1 Protein Homology CDS 1 239 . + 2 ID=cds-RUP84041.1;Parent=gene-D8M40_12440;Dbxref=NCBI_GP:RUP84041.1;Name=RUP84041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017528528.1;locus_tag=D8M40_12440;partial=true;product=hypothetical protein;protein_id=RUP84041.1;start_range=.,1;transl_table=11 RBME01000172.1 Genbank gene 287 783 . + . ID=gene-D8M40_12445;Name=D8M40_12445;end_range=783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12445;partial=true RBME01000172.1 Protein Homology CDS 287 783 . + 0 ID=cds-RUP84042.1;Parent=gene-D8M40_12445;Dbxref=NCBI_GP:RUP84042.1;Name=RUP84042.1;end_range=783,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015635694.1;locus_tag=D8M40_12445;partial=true;product=hypothetical protein;protein_id=RUP84042.1;transl_table=11 ##sequence-region RBME01000173.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000173.1 Genbank region 1 783 . + . ID=RBME01000173.1:1..783;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000173.1 Genbank gene 1 726 . - . ID=gene-D8M40_12450;Name=D8M40_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12450;partial=true;start_range=.,1 RBME01000173.1 Protein Homology CDS 1 726 . - 0 ID=cds-RUP83983.1;Parent=gene-D8M40_12450;Dbxref=NCBI_GP:RUP83983.1;Name=RUP83983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017991374.1;locus_tag=D8M40_12450;partial=true;product=ornithine cyclodeaminase family protein;protein_id=RUP83983.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000174.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000174.1 Genbank region 1 781 . + . ID=RBME01000174.1:1..781;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000174.1 Genbank gene 74 781 . + . ID=gene-D8M40_12455;Name=D8M40_12455;end_range=781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12455;partial=true RBME01000174.1 Protein Homology CDS 74 781 . + 0 ID=cds-RUP83982.1;Parent=gene-D8M40_12455;Dbxref=NCBI_GP:RUP83982.1;Name=RUP83982.1;end_range=781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019578920.1;locus_tag=D8M40_12455;partial=true;product=FAD-dependent oxidoreductase;protein_id=RUP83982.1;transl_table=11 ##sequence-region RBME01000175.1 1 781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000175.1 Genbank region 1 781 . + . ID=RBME01000175.1:1..781;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 ##sequence-region RBME01000176.1 1 780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000176.1 Genbank region 1 780 . + . ID=RBME01000176.1:1..780;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000176.1 Genbank gene 1 398 . + . ID=gene-D8M40_12460;Name=D8M40_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12460;partial=true;start_range=.,1 RBME01000176.1 Protein Homology CDS 1 398 . + 2 ID=cds-RUP83767.1;Parent=gene-D8M40_12460;Dbxref=NCBI_GP:RUP83767.1;Name=RUP83767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015371212.1;locus_tag=D8M40_12460;partial=true;product=HlyD family secretion protein;protein_id=RUP83767.1;start_range=.,1;transl_table=11 RBME01000176.1 Genbank gene 434 780 . - . ID=gene-D8M40_12465;Name=D8M40_12465;end_range=780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12465;partial=true RBME01000176.1 Protein Homology CDS 434 780 . - 2 ID=cds-RUP83768.1;Parent=gene-D8M40_12465;Dbxref=NCBI_GP:RUP83768.1;Name=RUP83768.1;end_range=780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020301246.1;locus_tag=D8M40_12465;partial=true;product=HlyD family secretion protein;protein_id=RUP83768.1;transl_table=11 ##sequence-region RBME01000177.1 1 778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000177.1 Genbank region 1 778 . + . ID=RBME01000177.1:1..778;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000177.1 Genbank gene 1 316 . - . ID=gene-D8M40_12470;Name=D8M40_12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12470;partial=true;start_range=.,1 RBME01000177.1 Protein Homology CDS 1 316 . - 0 ID=cds-RUP83764.1;Parent=gene-D8M40_12470;Dbxref=NCBI_GP:RUP83764.1;Name=RUP83764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005790285.1;locus_tag=D8M40_12470;partial=true;product=sulfite exporter TauE/SafE family protein;protein_id=RUP83764.1;start_range=.,1;transl_table=11 RBME01000177.1 Genbank gene 309 521 . - . ID=gene-D8M40_12475;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=D8M40_12475 RBME01000177.1 Protein Homology CDS 309 521 . - 0 ID=cds-RUP83765.1;Parent=gene-D8M40_12475;Dbxref=NCBI_GP:RUP83765.1;Name=RUP83765.1;gbkey=CDS;gene=ccoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007922395.1;locus_tag=D8M40_12475;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=RUP83765.1;transl_table=11 RBME01000177.1 Genbank gene 544 778 . - . ID=gene-D8M40_12480;Name=D8M40_12480;end_range=778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12480;partial=true RBME01000177.1 Protein Homology CDS 544 778 . - 1 ID=cds-RUP83766.1;Parent=gene-D8M40_12480;Dbxref=NCBI_GP:RUP83766.1;Name=RUP83766.1;end_range=778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016979306.1;locus_tag=D8M40_12480;partial=true;product=cation-translocating P-type ATPase;protein_id=RUP83766.1;transl_table=11 ##sequence-region RBME01000178.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000178.1 Genbank region 1 777 . + . ID=RBME01000178.1:1..777;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000178.1 Genbank pseudogene 13 435 . + . ID=gene-D8M40_12485;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=D8M40_12485;pseudo=true RBME01000178.1 Protein Homology CDS 13 435 . + 0 ID=cds-D8M40_12485;Parent=gene-D8M40_12485;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003235027.1;locus_tag=D8M40_12485;product=transcription termination/antitermination protein NusA;pseudo=true;transl_table=11 RBME01000178.1 Genbank gene 462 777 . + . ID=gene-D8M40_12490;Name=D8M40_12490;end_range=777,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12490;partial=true RBME01000178.1 Protein Homology CDS 462 777 . + 0 ID=cds-RUP83695.1;Parent=gene-D8M40_12490;Dbxref=NCBI_GP:RUP83695.1;Name=RUP83695.1;end_range=777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011059202.1;locus_tag=D8M40_12490;partial=true;product=translation initiation factor IF-2;protein_id=RUP83695.1;transl_table=11 ##sequence-region RBME01000179.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000179.1 Genbank region 1 777 . + . ID=RBME01000179.1:1..777;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000179.1 Genbank gene 1 605 . - . ID=gene-D8M40_12495;Name=D8M40_12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12495;partial=true;start_range=.,1 RBME01000179.1 Protein Homology CDS 1 605 . - 0 ID=cds-RUP83694.1;Parent=gene-D8M40_12495;Dbxref=NCBI_GP:RUP83694.1;Name=RUP83694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015634933.1;locus_tag=D8M40_12495;partial=true;product=amino acid adenylation;protein_id=RUP83694.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000017.1 1 38613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000017.1 Genbank region 1 38613 . + . ID=RBME01000017.1:1..38613;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000017.1 Genbank pseudogene 123 350 . + . ID=gene-D8M40_10260;Name=D8M40_10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10260;pseudo=true RBME01000017.1 Protein Homology CDS 123 350 . + 0 ID=cds-D8M40_10260;Parent=gene-D8M40_10260;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013170012.1;locus_tag=D8M40_10260;product=IS3 family transposase;pseudo=true;transl_table=11 RBME01000017.1 Genbank gene 1163 2518 . + . ID=gene-D8M40_10265;Name=D8M40_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10265 RBME01000017.1 Protein Homology CDS 1163 2518 . + 0 ID=cds-RUP87695.1;Parent=gene-D8M40_10265;Dbxref=NCBI_GP:RUP87695.1;Name=RUP87695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M40_10265;product=MFS transporter;protein_id=RUP87695.1;transl_table=11 RBME01000017.1 Genbank gene 2700 4058 . + . ID=gene-D8M40_10270;Name=D8M40_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10270 RBME01000017.1 Protein Homology CDS 2700 4058 . + 0 ID=cds-RUP87696.1;Parent=gene-D8M40_10270;Dbxref=NCBI_GP:RUP87696.1;Name=RUP87696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121021.1;locus_tag=D8M40_10270;product=YjiH family protein;protein_id=RUP87696.1;transl_table=11 RBME01000017.1 Genbank gene 4083 4832 . + . ID=gene-D8M40_10275;Name=D8M40_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10275 RBME01000017.1 Protein Homology CDS 4083 4832 . + 0 ID=cds-RUP87697.1;Parent=gene-D8M40_10275;Dbxref=NCBI_GP:RUP87697.1;Name=RUP87697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121022.1;locus_tag=D8M40_10275;product=IclR family transcriptional regulator;protein_id=RUP87697.1;transl_table=11 RBME01000017.1 Genbank gene 4953 6632 . + . ID=gene-D8M40_10280;Name=D8M40_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10280 RBME01000017.1 Protein Homology CDS 4953 6632 . + 0 ID=cds-RUP87698.1;Parent=gene-D8M40_10280;Dbxref=NCBI_GP:RUP87698.1;Name=RUP87698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121023.1;locus_tag=D8M40_10280;product=urocanate hydratase;protein_id=RUP87698.1;transl_table=11 RBME01000017.1 Genbank gene 6922 7905 . + . ID=gene-D8M40_10285;Name=D8M40_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10285 RBME01000017.1 Protein Homology CDS 6922 7905 . + 0 ID=cds-RUP87699.1;Parent=gene-D8M40_10285;Dbxref=NCBI_GP:RUP87699.1;Name=RUP87699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531063.1;locus_tag=D8M40_10285;product=ABC transporter permease;protein_id=RUP87699.1;transl_table=11 RBME01000017.1 Genbank gene 7908 8861 . + . ID=gene-D8M40_10290;Name=D8M40_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10290 RBME01000017.1 Protein Homology CDS 7908 8861 . + 0 ID=cds-RUP87700.1;Parent=gene-D8M40_10290;Dbxref=NCBI_GP:RUP87700.1;Name=RUP87700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121025.1;locus_tag=D8M40_10290;product=ABC transporter permease;protein_id=RUP87700.1;transl_table=11 RBME01000017.1 Genbank gene 8858 10732 . + . ID=gene-D8M40_10295;Name=D8M40_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10295 RBME01000017.1 Protein Homology CDS 8858 10732 . + 0 ID=cds-RUP87701.1;Parent=gene-D8M40_10295;Dbxref=NCBI_GP:RUP87701.1;Name=RUP87701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276888.1;locus_tag=D8M40_10295;product=ABC transporter ATP-binding protein;protein_id=RUP87701.1;transl_table=11 RBME01000017.1 Genbank gene 10899 12587 . + . ID=gene-D8M40_10300;Name=D8M40_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10300 RBME01000017.1 Protein Homology CDS 10899 12587 . + 0 ID=cds-RUP87719.1;Parent=gene-D8M40_10300;Dbxref=NCBI_GP:RUP87719.1;Name=RUP87719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005519634.1;locus_tag=D8M40_10300;product=ABC transporter family substrate-binding protein;protein_id=RUP87719.1;transl_table=11 RBME01000017.1 Genbank gene 12701 14470 . + . ID=gene-D8M40_10305;Name=D8M40_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10305 RBME01000017.1 Protein Homology CDS 12701 14470 . + 0 ID=cds-RUP87702.1;Parent=gene-D8M40_10305;Dbxref=NCBI_GP:RUP87702.1;Name=RUP87702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121028.1;locus_tag=D8M40_10305;product=ABC transporter family substrate-binding protein;protein_id=RUP87702.1;transl_table=11 RBME01000017.1 Genbank gene 14487 14966 . - . ID=gene-D8M40_10310;Name=D8M40_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10310 RBME01000017.1 Protein Homology CDS 14487 14966 . - 0 ID=cds-RUP87703.1;Parent=gene-D8M40_10310;Dbxref=NCBI_GP:RUP87703.1;Name=RUP87703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014011074.1;locus_tag=D8M40_10310;product=DUF488 family protein;protein_id=RUP87703.1;transl_table=11 RBME01000017.1 Genbank gene 14987 15871 . + . ID=gene-D8M40_10315;Name=D8M40_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10315 RBME01000017.1 Protein Homology CDS 14987 15871 . + 0 ID=cds-RUP87704.1;Parent=gene-D8M40_10315;Dbxref=NCBI_GP:RUP87704.1;Name=RUP87704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121030.1;locus_tag=D8M40_10315;product=mechanosensitive ion channel family protein;protein_id=RUP87704.1;transl_table=11 RBME01000017.1 Genbank gene 15871 16440 . + . ID=gene-D8M40_10320;Name=D8M40_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10320 RBME01000017.1 Protein Homology CDS 15871 16440 . + 0 ID=cds-RUP87705.1;Parent=gene-D8M40_10320;Dbxref=NCBI_GP:RUP87705.1;Name=RUP87705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121031.1;locus_tag=D8M40_10320;product=VanZ family protein;protein_id=RUP87705.1;transl_table=11 RBME01000017.1 Genbank gene 16848 17954 . + . ID=gene-D8M40_10325;Name=D8M40_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10325 RBME01000017.1 Protein Homology CDS 16848 17954 . + 0 ID=cds-RUP87720.1;Parent=gene-D8M40_10325;Dbxref=NCBI_GP:RUP87720.1;Name=RUP87720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400213.1;locus_tag=D8M40_10325;product=serine protease;protein_id=RUP87720.1;transl_table=11 RBME01000017.1 Genbank gene 18000 18812 . - . ID=gene-D8M40_10330;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=D8M40_10330 RBME01000017.1 Protein Homology CDS 18000 18812 . - 0 ID=cds-RUP87706.1;Parent=gene-D8M40_10330;Dbxref=NCBI_GP:RUP87706.1;Name=RUP87706.1;gbkey=CDS;gene=hisN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121033.1;locus_tag=D8M40_10330;product=histidinol-phosphatase;protein_id=RUP87706.1;transl_table=11 RBME01000017.1 Genbank gene 18805 19686 . - . ID=gene-D8M40_10335;Name=D8M40_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10335 RBME01000017.1 Protein Homology CDS 18805 19686 . - 0 ID=cds-RUP87707.1;Parent=gene-D8M40_10335;Dbxref=NCBI_GP:RUP87707.1;Name=RUP87707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121034.1;locus_tag=D8M40_10335;product=inositol monophosphatase family protein;protein_id=RUP87707.1;transl_table=11 RBME01000017.1 Genbank gene 19784 20938 . + . ID=gene-D8M40_10340;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=D8M40_10340 RBME01000017.1 Protein Homology CDS 19784 20938 . + 0 ID=cds-RUP87708.1;Parent=gene-D8M40_10340;Dbxref=NCBI_GP:RUP87708.1;Name=RUP87708.1;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121035.1;locus_tag=D8M40_10340;product=peptide chain release factor 2;protein_id=RUP87708.1;transl_table=11 RBME01000017.1 Genbank gene 20928 22520 . - . ID=gene-D8M40_10345;Name=D8M40_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10345 RBME01000017.1 Protein Homology CDS 20928 22520 . - 0 ID=cds-RUP87721.1;Parent=gene-D8M40_10345;Dbxref=NCBI_GP:RUP87721.1;Name=RUP87721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010266682.1;locus_tag=D8M40_10345;product=AbgT family transporter;protein_id=RUP87721.1;transl_table=11 RBME01000017.1 Genbank gene 22856 23545 . + . ID=gene-D8M40_10350;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=D8M40_10350 RBME01000017.1 Protein Homology CDS 22856 23545 . + 0 ID=cds-RUP87722.1;Parent=gene-D8M40_10350;Dbxref=NCBI_GP:RUP87722.1;Name=RUP87722.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600031.1;locus_tag=D8M40_10350;product=cell division ATP-binding protein FtsE;protein_id=RUP87722.1;transl_table=11 RBME01000017.1 Genbank gene 23603 24505 . + . ID=gene-D8M40_10355;Name=D8M40_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10355 RBME01000017.1 Protein Homology CDS 23603 24505 . + 0 ID=cds-RUP87709.1;Parent=gene-D8M40_10355;Dbxref=NCBI_GP:RUP87709.1;Name=RUP87709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014318805.1;locus_tag=D8M40_10355;product=ABC transporter permease;protein_id=RUP87709.1;transl_table=11 RBME01000017.1 Genbank gene 24528 25037 . + . ID=gene-D8M40_10360;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=D8M40_10360 RBME01000017.1 Protein Homology CDS 24528 25037 . + 0 ID=cds-RUP87710.1;Parent=gene-D8M40_10360;Dbxref=NCBI_GP:RUP87710.1;Name=RUP87710.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189093.1;locus_tag=D8M40_10360;product=SsrA-binding protein SmpB;protein_id=RUP87710.1;transl_table=11 RBME01000017.1 Genbank gene 25057 27099 . + . ID=gene-D8M40_10365;Name=D8M40_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10365 RBME01000017.1 Protein Homology CDS 25057 27099 . + 0 ID=cds-RUP87711.1;Parent=gene-D8M40_10365;Dbxref=NCBI_GP:RUP87711.1;Name=RUP87711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121040.1;locus_tag=D8M40_10365;product=acetyltransferase;protein_id=RUP87711.1;transl_table=11 RBME01000017.1 Genbank gene 27186 27971 . - . ID=gene-D8M40_10370;Name=D8M40_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10370 RBME01000017.1 Protein Homology CDS 27186 27971 . - 0 ID=cds-RUP87712.1;Parent=gene-D8M40_10370;Dbxref=NCBI_GP:RUP87712.1;Name=RUP87712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121041.1;locus_tag=D8M40_10370;product=DUF4300 family protein;protein_id=RUP87712.1;transl_table=11 RBME01000017.1 Genbank gene 28043 28291 . + . ID=gene-D8M40_10375;Name=D8M40_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10375 RBME01000017.1 GeneMarkS+ CDS 28043 28291 . + 0 ID=cds-RUP87713.1;Parent=gene-D8M40_10375;Dbxref=NCBI_GP:RUP87713.1;Name=RUP87713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10375;product=hypothetical protein;protein_id=RUP87713.1;transl_table=11 RBME01000017.1 Genbank gene 28358 28745 . + . ID=gene-D8M40_10380;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=D8M40_10380 RBME01000017.1 cmsearch tmRNA 28358 28745 . + . ID=rna-D8M40_10380;Parent=gene-D8M40_10380;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_10380;product=transfer-messenger RNA RBME01000017.1 cmsearch exon 28358 28745 . + . ID=exon-D8M40_10380-1;Parent=rna-D8M40_10380;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_10380;product=transfer-messenger RNA RBME01000017.1 Genbank pseudogene 29194 29430 . + . ID=gene-D8M40_10385;Name=D8M40_10385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10385;pseudo=true RBME01000017.1 Protein Homology CDS 29194 29430 . + 0 ID=cds-D8M40_10385;Parent=gene-D8M40_10385;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120530.1;locus_tag=D8M40_10385;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000017.1 Genbank gene 29644 30651 . + . ID=gene-D8M40_10390;Name=D8M40_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10390 RBME01000017.1 Protein Homology CDS 29644 30651 . + 0 ID=cds-RUP87714.1;Parent=gene-D8M40_10390;Dbxref=NCBI_GP:RUP87714.1;Name=RUP87714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11199.6;locus_tag=D8M40_10390;product=DUF2891 family protein;protein_id=RUP87714.1;transl_table=11 RBME01000017.1 Genbank gene 30661 32151 . - . ID=gene-D8M40_10395;Name=D8M40_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10395 RBME01000017.1 Protein Homology CDS 30661 32151 . - 0 ID=cds-RUP87715.1;Parent=gene-D8M40_10395;Dbxref=NCBI_GP:RUP87715.1;Name=RUP87715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012397099.1;locus_tag=D8M40_10395;product=MFS transporter;protein_id=RUP87715.1;transl_table=11 RBME01000017.1 Genbank gene 32395 32760 . + . ID=gene-D8M40_10400;Name=D8M40_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10400 RBME01000017.1 Protein Homology CDS 32395 32760 . + 0 ID=cds-RUP87723.1;Parent=gene-D8M40_10400;Dbxref=NCBI_GP:RUP87723.1;Name=RUP87723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118993.1;locus_tag=D8M40_10400;product=hypothetical protein;protein_id=RUP87723.1;transl_table=11 RBME01000017.1 Genbank gene 32989 34038 . + . ID=gene-D8M40_10405;Name=D8M40_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10405 RBME01000017.1 Protein Homology CDS 32989 34038 . + 0 ID=cds-RUP87716.1;Parent=gene-D8M40_10405;Dbxref=NCBI_GP:RUP87716.1;Name=RUP87716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121046.1;locus_tag=D8M40_10405;product=iron ABC transporter substrate-binding protein;protein_id=RUP87716.1;transl_table=11 RBME01000017.1 Genbank gene 34263 35264 . + . ID=gene-D8M40_10410;Name=D8M40_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10410 RBME01000017.1 Protein Homology CDS 34263 35264 . + 0 ID=cds-RUP87724.1;Parent=gene-D8M40_10410;Dbxref=NCBI_GP:RUP87724.1;Name=RUP87724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017577146.1;locus_tag=D8M40_10410;product=ABC transporter permease;protein_id=RUP87724.1;transl_table=11 RBME01000017.1 Genbank gene 35359 36408 . + . ID=gene-D8M40_10415;Name=D8M40_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10415 RBME01000017.1 Protein Homology CDS 35359 36408 . + 0 ID=cds-RUP87725.1;Parent=gene-D8M40_10415;Dbxref=NCBI_GP:RUP87725.1;Name=RUP87725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189072.1;locus_tag=D8M40_10415;product=iron ABC transporter permease;protein_id=RUP87725.1;transl_table=11 RBME01000017.1 Genbank gene 36405 37160 . + . ID=gene-D8M40_10420;Name=D8M40_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10420 RBME01000017.1 Protein Homology CDS 36405 37160 . + 0 ID=cds-RUP87717.1;Parent=gene-D8M40_10420;Dbxref=NCBI_GP:RUP87717.1;Name=RUP87717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600042.1;locus_tag=D8M40_10420;product=ATP-binding cassette domain-containing protein;protein_id=RUP87717.1;transl_table=11 RBME01000017.1 Genbank gene 37221 38204 . + . ID=gene-D8M40_10425;Name=D8M40_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10425 RBME01000017.1 Protein Homology CDS 37221 38204 . + 0 ID=cds-RUP87718.1;Parent=gene-D8M40_10425;Dbxref=NCBI_GP:RUP87718.1;Name=RUP87718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01758.14;locus_tag=D8M40_10425;product=arsenic resistance protein;protein_id=RUP87718.1;transl_table=11 ##sequence-region RBME01000180.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000180.1 Genbank region 1 777 . + . ID=RBME01000180.1:1..777;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000180.1 Genbank pseudogene 1 670 . + . ID=gene-D8M40_12500;Name=D8M40_12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12500;pseudo=true RBME01000180.1 Protein Homology CDS 1 670 . + 1 ID=cds-D8M40_12500;Parent=gene-D8M40_12500;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010450383.1;locus_tag=D8M40_12500;product=glycosyltransferase;pseudo=true;transl_table=11 RBME01000180.1 Genbank gene 667 777 . + . ID=gene-D8M40_12505;Name=D8M40_12505;end_range=777,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12505;partial=true RBME01000180.1 Protein Homology CDS 667 777 . + 0 ID=cds-RUP83562.1;Parent=gene-D8M40_12505;Dbxref=NCBI_GP:RUP83562.1;Name=RUP83562.1;end_range=777,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_794733.1;locus_tag=D8M40_12505;partial=true;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=RUP83562.1;transl_table=11 ##sequence-region RBME01000181.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000181.1 Genbank region 1 776 . + . ID=RBME01000181.1:1..776;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000181.1 Genbank gene 1 478 . + . ID=gene-D8M40_12510;Name=D8M40_12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12510;partial=true;start_range=.,1 RBME01000181.1 Protein Homology CDS 1 478 . + 1 ID=cds-RUP83512.1;Parent=gene-D8M40_12510;Dbxref=NCBI_GP:RUP83512.1;Name=RUP83512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005791399.1;locus_tag=D8M40_12510;partial=true;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=RUP83512.1;start_range=.,1;transl_table=11 RBME01000181.1 Genbank gene 542 776 . + . ID=gene-D8M40_12515;Name=D8M40_12515;end_range=776,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12515;partial=true RBME01000181.1 Protein Homology CDS 542 776 . + 0 ID=cds-RUP83513.1;Parent=gene-D8M40_12515;Dbxref=NCBI_GP:RUP83513.1;Name=RUP83513.1;end_range=776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233946.1;locus_tag=D8M40_12515;partial=true;product=mononuclear molybdenum enzyme YedY;protein_id=RUP83513.1;transl_table=11 ##sequence-region RBME01000182.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000182.1 Genbank region 1 776 . + . ID=RBME01000182.1:1..776;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000182.1 Genbank gene 1 776 . + . ID=gene-D8M40_12520;Name=D8M40_12520;end_range=776,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12520;partial=true;start_range=.,1 RBME01000182.1 Protein Homology CDS 1 776 . + 2 ID=cds-RUP83511.1;Parent=gene-D8M40_12520;Dbxref=NCBI_GP:RUP83511.1;Name=RUP83511.1;end_range=776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973491.1;locus_tag=D8M40_12520;partial=true;product=glycosyl transferase family 51;protein_id=RUP83511.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000183.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000183.1 Genbank region 1 773 . + . ID=RBME01000183.1:1..773;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000183.1 Genbank pseudogene 5 772 . - . ID=gene-D8M40_12525;Name=D8M40_12525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12525;pseudo=true RBME01000183.1 Protein Homology CDS 5 772 . - 0 ID=cds-D8M40_12525;Parent=gene-D8M40_12525;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019817592.1;locus_tag=D8M40_12525;product=serine/threonine protein kinase;pseudo=true;transl_table=11 ##sequence-region RBME01000184.1 1 772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000184.1 Genbank region 1 772 . + . ID=RBME01000184.1:1..772;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000184.1 Genbank gene 1 565 . - . ID=gene-D8M40_12530;Name=D8M40_12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12530;partial=true;start_range=.,1 RBME01000184.1 Protein Homology CDS 1 565 . - 0 ID=cds-RUP83453.1;Parent=gene-D8M40_12530;Dbxref=NCBI_GP:RUP83453.1;Name=RUP83453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019332309.1;locus_tag=D8M40_12530;partial=true;product=DNA-binding response regulator;protein_id=RUP83453.1;start_range=.,1;transl_table=11 RBME01000184.1 Genbank gene 682 772 . + . ID=gene-D8M40_12535;Name=D8M40_12535;end_range=772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12535;partial=true RBME01000184.1 Protein Homology CDS 682 772 . + 0 ID=cds-RUP83454.1;Parent=gene-D8M40_12535;Dbxref=NCBI_GP:RUP83454.1;Name=RUP83454.1;end_range=772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325785.1;locus_tag=D8M40_12535;partial=true;product=DNA-binding response regulator;protein_id=RUP83454.1;transl_table=11 ##sequence-region RBME01000185.1 1 770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000185.1 Genbank region 1 770 . + . ID=RBME01000185.1:1..770;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000185.1 Genbank gene 1 73 . - . ID=gene-D8M40_12540;Name=D8M40_12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12540;partial=true;start_range=.,1 RBME01000185.1 Protein Homology CDS 1 73 . - 0 ID=cds-RUP83232.1;Parent=gene-D8M40_12540;Dbxref=NCBI_GP:RUP83232.1;Name=RUP83232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003172213.1;locus_tag=D8M40_12540;partial=true;product=TetR family transcriptional regulator;protein_id=RUP83232.1;start_range=.,1;transl_table=11 RBME01000185.1 Genbank gene 180 770 . - . ID=gene-D8M40_12545;Name=D8M40_12545;end_range=770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12545;partial=true RBME01000185.1 Protein Homology CDS 180 770 . - 0 ID=cds-RUP83233.1;Parent=gene-D8M40_12545;Dbxref=NCBI_GP:RUP83233.1;Name=RUP83233.1;end_range=770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011532564.1;locus_tag=D8M40_12545;partial=true;product=lysine--tRNA ligase;protein_id=RUP83233.1;transl_table=11 ##sequence-region RBME01000186.1 1 769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000186.1 Genbank region 1 769 . + . ID=RBME01000186.1:1..769;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000186.1 Genbank gene 15 704 . + . ID=gene-D8M40_12550;Name=D8M40_12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12550 RBME01000186.1 Protein Homology CDS 15 704 . + 0 ID=cds-RUP83176.1;Parent=gene-D8M40_12550;Dbxref=NCBI_GP:RUP83176.1;Name=RUP83176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008154330.1;locus_tag=D8M40_12550;product=ABC transporter permease;protein_id=RUP83176.1;transl_table=11 ##sequence-region RBME01000187.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000187.1 Genbank region 1 764 . + . ID=RBME01000187.1:1..764;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000187.1 Genbank gene 1 266 . - . ID=gene-D8M40_12555;Name=D8M40_12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12555;partial=true;start_range=.,1 RBME01000187.1 Protein Homology CDS 1 266 . - 0 ID=cds-RUP83174.1;Parent=gene-D8M40_12555;Dbxref=NCBI_GP:RUP83174.1;Name=RUP83174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003381329.1;locus_tag=D8M40_12555;partial=true;product=YeeE/YedE family protein;protein_id=RUP83174.1;start_range=.,1;transl_table=11 RBME01000187.1 Genbank gene 269 703 . - . ID=gene-D8M40_12560;Name=D8M40_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12560 RBME01000187.1 Protein Homology CDS 269 703 . - 0 ID=cds-RUP83175.1;Parent=gene-D8M40_12560;Dbxref=NCBI_GP:RUP83175.1;Name=RUP83175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010209167.1;locus_tag=D8M40_12560;product=YeeE/YedE family protein;protein_id=RUP83175.1;transl_table=11 ##sequence-region RBME01000188.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000188.1 Genbank region 1 763 . + . ID=RBME01000188.1:1..763;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000188.1 Genbank gene 1 763 . + . ID=gene-D8M40_12565;Name=D8M40_12565;end_range=763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12565;partial=true;start_range=.,1 RBME01000188.1 Protein Homology CDS 1 763 . + 1 ID=cds-RUP83173.1;Parent=gene-D8M40_12565;Dbxref=NCBI_GP:RUP83173.1;Name=RUP83173.1;end_range=763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003177055.1;locus_tag=D8M40_12565;partial=true;product=penicillin-binding protein 1C;protein_id=RUP83173.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000189.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000189.1 Genbank region 1 761 . + . ID=RBME01000189.1:1..761;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000189.1 Genbank gene 1 737 . - . ID=gene-D8M40_12570;Name=D8M40_12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12570;partial=true;start_range=.,1 RBME01000189.1 GeneMarkS+ CDS 1 737 . - 0 ID=cds-RUP83172.1;Parent=gene-D8M40_12570;Dbxref=NCBI_GP:RUP83172.1;Name=RUP83172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12570;partial=true;product=hypothetical protein;protein_id=RUP83172.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000018.1 1 35886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000018.1 Genbank region 1 35886 . + . ID=RBME01000018.1:1..35886;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000018.1 Genbank gene 191 385 . - . ID=gene-D8M40_10430;Name=D8M40_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10430 RBME01000018.1 Protein Homology CDS 191 385 . - 0 ID=cds-RUP87661.1;Parent=gene-D8M40_10430;Dbxref=NCBI_GP:RUP87661.1;Name=RUP87661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005393129.1;locus_tag=D8M40_10430;product=PspC domain-containing protein;protein_id=RUP87661.1;transl_table=11 RBME01000018.1 Genbank gene 402 875 . - . ID=gene-D8M40_10435;Name=D8M40_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10435 RBME01000018.1 Protein Homology CDS 402 875 . - 0 ID=cds-RUP87662.1;Parent=gene-D8M40_10435;Dbxref=NCBI_GP:RUP87662.1;Name=RUP87662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327249.1;locus_tag=D8M40_10435;product=ribose-5-phosphate isomerase;protein_id=RUP87662.1;transl_table=11 RBME01000018.1 Genbank gene 959 1231 . - . ID=gene-D8M40_10440;Name=D8M40_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10440 RBME01000018.1 GeneMarkS+ CDS 959 1231 . - 0 ID=cds-RUP87663.1;Parent=gene-D8M40_10440;Dbxref=NCBI_GP:RUP87663.1;Name=RUP87663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10440;product=hypothetical protein;protein_id=RUP87663.1;transl_table=11 RBME01000018.1 Genbank gene 1234 1845 . - . ID=gene-D8M40_10445;Name=D8M40_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10445 RBME01000018.1 Protein Homology CDS 1234 1845 . - 0 ID=cds-RUP87664.1;Parent=gene-D8M40_10445;Dbxref=NCBI_GP:RUP87664.1;Name=RUP87664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277874.1;locus_tag=D8M40_10445;product=disulfide bond formation protein DsbA;protein_id=RUP87664.1;transl_table=11 RBME01000018.1 Genbank gene 2052 4607 . + . ID=gene-D8M40_10450;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=D8M40_10450 RBME01000018.1 Protein Homology CDS 2052 4607 . + 0 ID=cds-RUP87665.1;Parent=gene-D8M40_10450;Dbxref=NCBI_GP:RUP87665.1;Name=RUP87665.1;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120925.1;locus_tag=D8M40_10450;product=aminopeptidase N;protein_id=RUP87665.1;transl_table=11 RBME01000018.1 Genbank gene 4632 5363 . - . ID=gene-D8M40_10455;Name=D8M40_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10455 RBME01000018.1 Protein Homology CDS 4632 5363 . - 0 ID=cds-RUP87666.1;Parent=gene-D8M40_10455;Dbxref=NCBI_GP:RUP87666.1;Name=RUP87666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120924.1;locus_tag=D8M40_10455;product=SDR family oxidoreductase;protein_id=RUP87666.1;transl_table=11 RBME01000018.1 Genbank gene 5410 6615 . - . ID=gene-D8M40_10460;Name=D8M40_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10460 RBME01000018.1 Protein Homology CDS 5410 6615 . - 0 ID=cds-RUP87688.1;Parent=gene-D8M40_10460;Dbxref=NCBI_GP:RUP87688.1;Name=RUP87688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324015.1;locus_tag=D8M40_10460;product=cystathionine gamma-synthase;protein_id=RUP87688.1;transl_table=11 RBME01000018.1 Genbank gene 6793 7842 . + . ID=gene-D8M40_10465;Name=D8M40_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10465 RBME01000018.1 Protein Homology CDS 6793 7842 . + 0 ID=cds-RUP87667.1;Parent=gene-D8M40_10465;Dbxref=NCBI_GP:RUP87667.1;Name=RUP87667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401677.1;locus_tag=D8M40_10465;product=mechanosensitive ion channel family protein;protein_id=RUP87667.1;transl_table=11 RBME01000018.1 Genbank gene 7823 8326 . + . ID=gene-D8M40_10470;Name=D8M40_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10470 RBME01000018.1 Protein Homology CDS 7823 8326 . + 0 ID=cds-RUP87668.1;Parent=gene-D8M40_10470;Dbxref=NCBI_GP:RUP87668.1;Name=RUP87668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120921.1;locus_tag=D8M40_10470;product=globin;protein_id=RUP87668.1;transl_table=11 RBME01000018.1 Genbank gene 8469 9557 . - . ID=gene-D8M40_10475;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=D8M40_10475 RBME01000018.1 Protein Homology CDS 8469 9557 . - 0 ID=cds-RUP87669.1;Parent=gene-D8M40_10475;Dbxref=NCBI_GP:RUP87669.1;Name=RUP87669.1;gbkey=CDS;gene=ald;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324009.1;locus_tag=D8M40_10475;product=alanine dehydrogenase;protein_id=RUP87669.1;transl_table=11 RBME01000018.1 cmsearch riboswitch 9794 9907 . + . ID=id-RBME01000018.1:9794..9907;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch RBME01000018.1 Genbank gene 9904 11808 . + . ID=gene-D8M40_10480;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=D8M40_10480 RBME01000018.1 Protein Homology CDS 9904 11808 . + 0 ID=cds-RUP87689.1;Parent=gene-D8M40_10480;Dbxref=NCBI_GP:RUP87689.1;Name=RUP87689.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324444.1;locus_tag=D8M40_10480;product=phosphomethylpyrimidine synthase ThiC;protein_id=RUP87689.1;transl_table=11 RBME01000018.1 Genbank gene 12017 12229 . + . ID=gene-D8M40_10485;Name=D8M40_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10485 RBME01000018.1 GeneMarkS+ CDS 12017 12229 . + 0 ID=cds-RUP87670.1;Parent=gene-D8M40_10485;Dbxref=NCBI_GP:RUP87670.1;Name=RUP87670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10485;product=hypothetical protein;protein_id=RUP87670.1;transl_table=11 RBME01000018.1 Genbank gene 12229 12969 . + . ID=gene-D8M40_10490;Name=D8M40_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10490 RBME01000018.1 Protein Homology CDS 12229 12969 . + 0 ID=cds-RUP87671.1;Parent=gene-D8M40_10490;Dbxref=NCBI_GP:RUP87671.1;Name=RUP87671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120918.1;locus_tag=D8M40_10490;product=cell filamentation protein Fic;protein_id=RUP87671.1;transl_table=11 RBME01000018.1 Genbank gene 13032 13964 . - . ID=gene-D8M40_10495;Name=D8M40_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10495 RBME01000018.1 Protein Homology CDS 13032 13964 . - 0 ID=cds-RUP87672.1;Parent=gene-D8M40_10495;Dbxref=NCBI_GP:RUP87672.1;Name=RUP87672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=D8M40_10495;product=hypothetical protein;protein_id=RUP87672.1;transl_table=11 RBME01000018.1 Genbank gene 13995 15140 . - . ID=gene-D8M40_10500;Name=D8M40_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10500 RBME01000018.1 Protein Homology CDS 13995 15140 . - 0 ID=cds-RUP87673.1;Parent=gene-D8M40_10500;Dbxref=NCBI_GP:RUP87673.1;Name=RUP87673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04235.10;locus_tag=D8M40_10500;product=DUF418 domain-containing protein;protein_id=RUP87673.1;transl_table=11 RBME01000018.1 Genbank gene 15316 16017 . - . ID=gene-D8M40_10505;Name=D8M40_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10505 RBME01000018.1 Protein Homology CDS 15316 16017 . - 0 ID=cds-RUP87674.1;Parent=gene-D8M40_10505;Dbxref=NCBI_GP:RUP87674.1;Name=RUP87674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020612.1;locus_tag=D8M40_10505;product=hypothetical protein;protein_id=RUP87674.1;transl_table=11 RBME01000018.1 Genbank gene 16017 16667 . - . ID=gene-D8M40_10510;Name=D8M40_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10510 RBME01000018.1 Protein Homology CDS 16017 16667 . - 0 ID=cds-RUP87675.1;Parent=gene-D8M40_10510;Dbxref=NCBI_GP:RUP87675.1;Name=RUP87675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582189.1;locus_tag=D8M40_10510;product=acyl-CoA thioesterase;protein_id=RUP87675.1;transl_table=11 RBME01000018.1 Genbank gene 16728 18398 . - . ID=gene-D8M40_10515;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=D8M40_10515 RBME01000018.1 Protein Homology CDS 16728 18398 . - 0 ID=cds-RUP87676.1;Parent=gene-D8M40_10515;Dbxref=NCBI_GP:RUP87676.1;Name=RUP87676.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120913.1;locus_tag=D8M40_10515;product=energy-dependent translational throttle protein EttA;protein_id=RUP87676.1;transl_table=11 RBME01000018.1 Genbank gene 18517 19077 . - . ID=gene-D8M40_10520;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=D8M40_10520 RBME01000018.1 Protein Homology CDS 18517 19077 . - 0 ID=cds-RUP87677.1;Parent=gene-D8M40_10520;Dbxref=NCBI_GP:RUP87677.1;Name=RUP87677.1;gbkey=CDS;gene=ssb;inference=COORDINATES: protein motif:HMM:TIGR00621;locus_tag=D8M40_10520;product=single-stranded DNA-binding protein;protein_id=RUP87677.1;transl_table=11 RBME01000018.1 Genbank gene 19318 20319 . - . ID=gene-D8M40_10525;Name=D8M40_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10525 RBME01000018.1 Protein Homology CDS 19318 20319 . - 0 ID=cds-RUP87678.1;Parent=gene-D8M40_10525;Dbxref=NCBI_GP:RUP87678.1;Name=RUP87678.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13472.4;locus_tag=D8M40_10525;product=hypothetical protein;protein_id=RUP87678.1;transl_table=11 RBME01000018.1 Genbank gene 20386 22662 . - . ID=gene-D8M40_10530;Name=D8M40_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10530 RBME01000018.1 Protein Homology CDS 20386 22662 . - 0 ID=cds-RUP87679.1;Parent=gene-D8M40_10530;Dbxref=NCBI_GP:RUP87679.1;Name=RUP87679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120910.1;locus_tag=D8M40_10530;product=copper resistance protein;protein_id=RUP87679.1;transl_table=11 RBME01000018.1 Genbank gene 22773 22846 . + . ID=gene-D8M40_10535;Name=D8M40_10535;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_10535 RBME01000018.1 tRNAscan-SE tRNA 22773 22846 . + . ID=rna-D8M40_10535;Parent=gene-D8M40_10535;anticodon=(pos:22807..22809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10535;product=tRNA-Arg RBME01000018.1 tRNAscan-SE exon 22773 22846 . + . ID=exon-D8M40_10535-1;Parent=rna-D8M40_10535;anticodon=(pos:22807..22809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10535;product=tRNA-Arg RBME01000018.1 Genbank gene 23008 23805 . + . ID=gene-D8M40_10540;Name=D8M40_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10540 RBME01000018.1 Protein Homology CDS 23008 23805 . + 0 ID=cds-RUP87680.1;Parent=gene-D8M40_10540;Dbxref=NCBI_GP:RUP87680.1;Name=RUP87680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120909.1;locus_tag=D8M40_10540;product=SDR family oxidoreductase;protein_id=RUP87680.1;transl_table=11 RBME01000018.1 Genbank gene 23862 24542 . + . ID=gene-D8M40_10545;Name=D8M40_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10545 RBME01000018.1 Protein Homology CDS 23862 24542 . + 0 ID=cds-RUP87681.1;Parent=gene-D8M40_10545;Dbxref=NCBI_GP:RUP87681.1;Name=RUP87681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120908.1;locus_tag=D8M40_10545;product=oligoribonuclease;protein_id=RUP87681.1;transl_table=11 RBME01000018.1 Genbank gene 24592 24667 . + . ID=gene-D8M40_10550;Name=D8M40_10550;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_10550 RBME01000018.1 tRNAscan-SE tRNA 24592 24667 . + . ID=rna-D8M40_10550;Parent=gene-D8M40_10550;anticodon=(pos:24625..24627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10550;product=tRNA-His RBME01000018.1 tRNAscan-SE exon 24592 24667 . + . ID=exon-D8M40_10550-1;Parent=rna-D8M40_10550;anticodon=(pos:24625..24627);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10550;product=tRNA-His RBME01000018.1 Genbank gene 24977 26500 . + . ID=gene-D8M40_10555;Name=D8M40_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10555 RBME01000018.1 Protein Homology CDS 24977 26500 . + 0 ID=cds-RUP87682.1;Parent=gene-D8M40_10555;Dbxref=NCBI_GP:RUP87682.1;Name=RUP87682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120907.1;locus_tag=D8M40_10555;product=oxidoreductase;protein_id=RUP87682.1;transl_table=11 RBME01000018.1 Genbank gene 26571 26840 . + . ID=gene-D8M40_10560;Name=D8M40_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10560 RBME01000018.1 GeneMarkS+ CDS 26571 26840 . + 0 ID=cds-RUP87683.1;Parent=gene-D8M40_10560;Dbxref=NCBI_GP:RUP87683.1;Name=RUP87683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10560;product=hypothetical protein;protein_id=RUP87683.1;transl_table=11 RBME01000018.1 Genbank gene 26844 28094 . - . ID=gene-D8M40_10565;Name=D8M40_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10565 RBME01000018.1 Protein Homology CDS 26844 28094 . - 0 ID=cds-RUP87684.1;Parent=gene-D8M40_10565;Dbxref=NCBI_GP:RUP87684.1;Name=RUP87684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01266.22;locus_tag=D8M40_10565;product=FAD-dependent oxidoreductase;protein_id=RUP87684.1;transl_table=11 RBME01000018.1 Genbank gene 28146 29528 . - . ID=gene-D8M40_10570;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D8M40_10570 RBME01000018.1 Protein Homology CDS 28146 29528 . - 0 ID=cds-RUP87685.1;Parent=gene-D8M40_10570;Dbxref=NCBI_GP:RUP87685.1;Name=RUP87685.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120904.1;locus_tag=D8M40_10570;product=branched-chain amino acid transport system II carrier protein;protein_id=RUP87685.1;transl_table=11 RBME01000018.1 Genbank gene 29609 30589 . + . ID=gene-D8M40_10575;Name=D8M40_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10575 RBME01000018.1 Protein Homology CDS 29609 30589 . + 0 ID=cds-RUP87690.1;Parent=gene-D8M40_10575;Dbxref=NCBI_GP:RUP87690.1;Name=RUP87690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120903.1;locus_tag=D8M40_10575;product=ornithine cyclodeaminase family protein;protein_id=RUP87690.1;transl_table=11 RBME01000018.1 Genbank gene 30613 31281 . + . ID=gene-D8M40_10580;Name=D8M40_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10580 RBME01000018.1 Protein Homology CDS 30613 31281 . + 0 ID=cds-RUP87686.1;Parent=gene-D8M40_10580;Dbxref=NCBI_GP:RUP87686.1;Name=RUP87686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120902.1;locus_tag=D8M40_10580;product=GntR family transcriptional regulator;protein_id=RUP87686.1;transl_table=11 RBME01000018.1 Genbank gene 31301 33775 . - . ID=gene-D8M40_10585;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=D8M40_10585 RBME01000018.1 Protein Homology CDS 31301 33775 . - 0 ID=cds-RUP87691.1;Parent=gene-D8M40_10585;Dbxref=NCBI_GP:RUP87691.1;Name=RUP87691.1;gbkey=CDS;gene=hrpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328240.1;locus_tag=D8M40_10585;product=ATP-dependent helicase HrpB;protein_id=RUP87691.1;transl_table=11 RBME01000018.1 Genbank gene 33868 35016 . - . ID=gene-D8M40_10590;Name=D8M40_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10590 RBME01000018.1 Protein Homology CDS 33868 35016 . - 0 ID=cds-RUP87687.1;Parent=gene-D8M40_10590;Dbxref=NCBI_GP:RUP87687.1;Name=RUP87687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120900.1;locus_tag=D8M40_10590;product=transpeptidase;protein_id=RUP87687.1;transl_table=11 RBME01000018.1 Genbank gene 35509 35581 . + . ID=gene-D8M40_10595;Name=D8M40_10595;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_10595 RBME01000018.1 tRNAscan-SE tRNA 35509 35581 . + . ID=rna-D8M40_10595;Parent=gene-D8M40_10595;anticodon=(pos:35542..35544);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10595;product=tRNA-Lys RBME01000018.1 tRNAscan-SE exon 35509 35581 . + . ID=exon-D8M40_10595-1;Parent=rna-D8M40_10595;anticodon=(pos:35542..35544);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_10595;product=tRNA-Lys ##sequence-region RBME01000190.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000190.1 Genbank region 1 761 . + . ID=RBME01000190.1:1..761;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000190.1 Genbank gene 1 561 . - . ID=gene-D8M40_12575;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=D8M40_12575;partial=true;start_range=.,1 RBME01000190.1 Protein Homology CDS 1 561 . - 0 ID=cds-RUP83115.1;Parent=gene-D8M40_12575;Dbxref=NCBI_GP:RUP83115.1;Name=RUP83115.1;gbkey=CDS;gene=hemW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008434163.1;locus_tag=D8M40_12575;partial=true;product=radical SAM family heme chaperone HemW;protein_id=RUP83115.1;start_range=.,1;transl_table=11 RBME01000190.1 Genbank gene 558 761 . - . ID=gene-D8M40_12580;Name=D8M40_12580;end_range=761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12580;partial=true RBME01000190.1 Protein Homology CDS 558 761 . - 0 ID=cds-RUP83114.1;Parent=gene-D8M40_12580;Dbxref=NCBI_GP:RUP83114.1;Name=RUP83114.1;end_range=761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233580.1;locus_tag=D8M40_12580;partial=true;product=non-canonical purine NTP pyrophosphatase;protein_id=RUP83114.1;transl_table=11 ##sequence-region RBME01000191.1 1 760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000191.1 Genbank region 1 760 . + . ID=RBME01000191.1:1..760;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000191.1 Genbank gene 1 604 . + . ID=gene-D8M40_12585;Name=D8M40_12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12585;partial=true;start_range=.,1 RBME01000191.1 Protein Homology CDS 1 604 . + 1 ID=cds-RUP82952.1;Parent=gene-D8M40_12585;Dbxref=NCBI_GP:RUP82952.1;Name=RUP82952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003211731.1;locus_tag=D8M40_12585;partial=true;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=RUP82952.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000192.1 1 759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000192.1 Genbank region 1 759 . + . ID=RBME01000192.1:1..759;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000192.1 Genbank pseudogene 8 238 . - . ID=gene-D8M40_12590;Name=D8M40_12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12590;pseudo=true RBME01000192.1 Protein Homology CDS 8 238 . - 0 ID=cds-D8M40_12590;Parent=gene-D8M40_12590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017904164.1;locus_tag=D8M40_12590;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000192.1 Genbank gene 357 759 . + . ID=gene-D8M40_12595;Name=D8M40_12595;end_range=759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12595;partial=true RBME01000192.1 Protein Homology CDS 357 759 . + 0 ID=cds-RUP82890.1;Parent=gene-D8M40_12595;Dbxref=NCBI_GP:RUP82890.1;Name=RUP82890.1;end_range=759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017340793.1;locus_tag=D8M40_12595;partial=true;product=penicillin-binding protein 1B;protein_id=RUP82890.1;transl_table=11 ##sequence-region RBME01000193.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000193.1 Genbank region 1 754 . + . ID=RBME01000193.1:1..754;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000193.1 Genbank gene 1 754 . - . ID=gene-D8M40_12600;Name=D8M40_12600;end_range=754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12600;partial=true;start_range=.,1 RBME01000193.1 Protein Homology CDS 1 754 . - 1 ID=cds-RUP82889.1;Parent=gene-D8M40_12600;Dbxref=NCBI_GP:RUP82889.1;Name=RUP82889.1;end_range=754,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_235088.1;locus_tag=D8M40_12600;partial=true;product=FAD-binding protein;protein_id=RUP82889.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000194.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000194.1 Genbank region 1 754 . + . ID=RBME01000194.1:1..754;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000194.1 Genbank gene 1 736 . - . ID=gene-D8M40_12605;Name=D8M40_12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12605;partial=true;start_range=.,1 RBME01000194.1 Protein Homology CDS 1 736 . - 0 ID=cds-RUP82888.1;Parent=gene-D8M40_12605;Dbxref=NCBI_GP:RUP82888.1;Name=RUP82888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017939190.1;locus_tag=D8M40_12605;partial=true;product=endopeptidase La;protein_id=RUP82888.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000195.1 1 754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000195.1 Genbank region 1 754 . + . ID=RBME01000195.1:1..754;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000195.1 Genbank gene 1 188 . + . ID=gene-D8M40_12610;Name=D8M40_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12610;partial=true;start_range=.,1 RBME01000195.1 Protein Homology CDS 1 188 . + 2 ID=cds-RUP82886.1;Parent=gene-D8M40_12610;Dbxref=NCBI_GP:RUP82886.1;Name=RUP82886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017135562.1;locus_tag=D8M40_12610;partial=true;product=response regulator;protein_id=RUP82886.1;start_range=.,1;transl_table=11 RBME01000195.1 Genbank gene 374 754 . - . ID=gene-D8M40_12615;Name=D8M40_12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12615 RBME01000195.1 Protein Homology CDS 374 754 . - 0 ID=cds-RUP82887.1;Parent=gene-D8M40_12615;Dbxref=NCBI_GP:RUP82887.1;Name=RUP82887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020798283.1;locus_tag=D8M40_12615;product=response regulator;protein_id=RUP82887.1;transl_table=11 ##sequence-region RBME01000196.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000196.1 Genbank region 1 753 . + . ID=RBME01000196.1:1..753;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000196.1 Genbank gene 1 753 . - . ID=gene-D8M40_12620;Name=D8M40_12620;end_range=753,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12620;partial=true;start_range=.,1 RBME01000196.1 Protein Homology CDS 1 753 . - 1 ID=cds-RUP82815.1;Parent=gene-D8M40_12620;Dbxref=NCBI_GP:RUP82815.1;Name=RUP82815.1;end_range=753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010174350.1;locus_tag=D8M40_12620;partial=true;product=DUF748 domain-containing protein;protein_id=RUP82815.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000197.1 1 752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000197.1 Genbank region 1 752 . + . ID=RBME01000197.1:1..752;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000197.1 Genbank gene 1 752 . + . ID=gene-D8M40_12625;Name=D8M40_12625;end_range=752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12625;partial=true;start_range=.,1 RBME01000197.1 Protein Homology CDS 1 752 . + 2 ID=cds-RUP82353.1;Parent=gene-D8M40_12625;Dbxref=NCBI_GP:RUP82353.1;Name=RUP82353.1;end_range=752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253899.1;locus_tag=D8M40_12625;partial=true;product=hypothetical protein;protein_id=RUP82353.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000198.1 1 752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000198.1 Genbank region 1 752 . + . ID=RBME01000198.1:1..752;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000198.1 Genbank gene 111 752 . + . ID=gene-D8M40_12630;Name=D8M40_12630;end_range=752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12630;partial=true RBME01000198.1 Protein Homology CDS 111 752 . + 0 ID=cds-RUP82293.1;Parent=gene-D8M40_12630;Dbxref=NCBI_GP:RUP82293.1;Name=RUP82293.1;end_range=752,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007921333.1;locus_tag=D8M40_12630;partial=true;product=CPBP family intramembrane metalloprotease;protein_id=RUP82293.1;transl_table=11 ##sequence-region RBME01000199.1 1 751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000199.1 Genbank region 1 751 . + . ID=RBME01000199.1:1..751;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000199.1 Genbank gene 1 328 . + . ID=gene-D8M40_12635;Name=D8M40_12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12635;partial=true;start_range=.,1 RBME01000199.1 Protein Homology CDS 1 328 . + 1 ID=cds-RUP82291.1;Parent=gene-D8M40_12635;Dbxref=NCBI_GP:RUP82291.1;Name=RUP82291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015885055.1;locus_tag=D8M40_12635;partial=true;product=dienelactone hydrolase;protein_id=RUP82291.1;start_range=.,1;transl_table=11 RBME01000199.1 Genbank gene 403 751 . + . ID=gene-D8M40_12640;Name=D8M40_12640;end_range=751,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12640;partial=true RBME01000199.1 Protein Homology CDS 403 751 . + 0 ID=cds-RUP82292.1;Parent=gene-D8M40_12640;Dbxref=NCBI_GP:RUP82292.1;Name=RUP82292.1;end_range=751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_792502.1;locus_tag=D8M40_12640;partial=true;product=NAD-dependent epimerase/dehydratase family protein;protein_id=RUP82292.1;transl_table=11 ##sequence-region RBME01000019.1 1 34335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000019.1 Genbank region 1 34335 . + . ID=RBME01000019.1:1..34335;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000019.1 Genbank gene 205 1524 . + . ID=gene-D8M40_10600;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=D8M40_10600 RBME01000019.1 Protein Homology CDS 205 1524 . + 0 ID=cds-RUP87628.1;Parent=gene-D8M40_10600;Dbxref=NCBI_GP:RUP87628.1;Name=RUP87628.1;gbkey=CDS;gene=mshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021389.1;locus_tag=D8M40_10600;product=D-inositol-3-phosphate glycosyltransferase;protein_id=RUP87628.1;transl_table=11 RBME01000019.1 Genbank gene 1552 2373 . + . ID=gene-D8M40_10605;Name=D8M40_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10605 RBME01000019.1 Protein Homology CDS 1552 2373 . + 0 ID=cds-RUP87629.1;Parent=gene-D8M40_10605;Dbxref=NCBI_GP:RUP87629.1;Name=RUP87629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121380.1;locus_tag=D8M40_10605;product=phosphoglyceromutase;protein_id=RUP87629.1;transl_table=11 RBME01000019.1 Genbank gene 2697 3893 . + . ID=gene-D8M40_10610;Name=D8M40_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10610 RBME01000019.1 Protein Homology CDS 2697 3893 . + 0 ID=cds-RUP87651.1;Parent=gene-D8M40_10610;Dbxref=NCBI_GP:RUP87651.1;Name=RUP87651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599650.1;locus_tag=D8M40_10610;product=sensor histidine kinase;protein_id=RUP87651.1;transl_table=11 RBME01000019.1 Genbank gene 4082 4783 . + . ID=gene-D8M40_10615;Name=D8M40_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10615 RBME01000019.1 Protein Homology CDS 4082 4783 . + 0 ID=cds-RUP87630.1;Parent=gene-D8M40_10615;Dbxref=NCBI_GP:RUP87630.1;Name=RUP87630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189824.1;locus_tag=D8M40_10615;product=DNA-binding response regulator;protein_id=RUP87630.1;transl_table=11 RBME01000019.1 Genbank gene 4852 5769 . - . ID=gene-D8M40_10620;Name=D8M40_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10620 RBME01000019.1 Protein Homology CDS 4852 5769 . - 0 ID=cds-RUP87631.1;Parent=gene-D8M40_10620;Dbxref=NCBI_GP:RUP87631.1;Name=RUP87631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121377.1;locus_tag=D8M40_10620;product=hypothetical protein;protein_id=RUP87631.1;transl_table=11 RBME01000019.1 Genbank gene 5803 6732 . + . ID=gene-D8M40_10625;Name=D8M40_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10625 RBME01000019.1 Protein Homology CDS 5803 6732 . + 0 ID=cds-RUP87632.1;Parent=gene-D8M40_10625;Dbxref=NCBI_GP:RUP87632.1;Name=RUP87632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714802.1;locus_tag=D8M40_10625;product=Ppx/GppA family phosphatase;protein_id=RUP87632.1;transl_table=11 RBME01000019.1 Genbank gene 6744 8072 . + . ID=gene-D8M40_10630;Name=D8M40_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10630 RBME01000019.1 GeneMarkS+ CDS 6744 8072 . + 0 ID=cds-RUP87633.1;Parent=gene-D8M40_10630;Dbxref=NCBI_GP:RUP87633.1;Name=RUP87633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10630;product=hypothetical protein;protein_id=RUP87633.1;transl_table=11 RBME01000019.1 Genbank gene 8227 9033 . + . ID=gene-D8M40_10635;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=D8M40_10635 RBME01000019.1 Protein Homology CDS 8227 9033 . + 0 ID=cds-RUP87634.1;Parent=gene-D8M40_10635;Dbxref=NCBI_GP:RUP87634.1;Name=RUP87634.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121374.1;locus_tag=D8M40_10635;product=pyrroline-5-carboxylate reductase;protein_id=RUP87634.1;transl_table=11 RBME01000019.1 Genbank gene 9570 9761 . + . ID=gene-D8M40_10640;Name=D8M40_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10640 RBME01000019.1 Protein Homology CDS 9570 9761 . + 0 ID=cds-RUP87635.1;Parent=gene-D8M40_10640;Dbxref=NCBI_GP:RUP87635.1;Name=RUP87635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599659.1;locus_tag=D8M40_10640;product=DNA-binding protein;protein_id=RUP87635.1;transl_table=11 RBME01000019.1 Genbank gene 9990 10091 . + . ID=gene-D8M40_10645;Name=D8M40_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10645 RBME01000019.1 Protein Homology CDS 9990 10091 . + 0 ID=cds-RUP87636.1;Parent=gene-D8M40_10645;Dbxref=NCBI_GP:RUP87636.1;Name=RUP87636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=D8M40_10645;product=AURKAIP1/COX24 domain-containing protein;protein_id=RUP87636.1;transl_table=11 RBME01000019.1 Genbank gene 10448 12241 . - . ID=gene-D8M40_10650;Name=D8M40_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10650 RBME01000019.1 Protein Homology CDS 10448 12241 . - 0 ID=cds-RUP87637.1;Parent=gene-D8M40_10650;Dbxref=NCBI_GP:RUP87637.1;Name=RUP87637.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01844.21;locus_tag=D8M40_10650;product=HNH endonuclease;protein_id=RUP87637.1;transl_table=11 RBME01000019.1 Genbank gene 12343 13296 . - . ID=gene-D8M40_10655;Name=D8M40_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10655 RBME01000019.1 Protein Homology CDS 12343 13296 . - 0 ID=cds-RUP87652.1;Parent=gene-D8M40_10655;Dbxref=NCBI_GP:RUP87652.1;Name=RUP87652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323005.1;locus_tag=D8M40_10655;product=HAD-IB family hydrolase;protein_id=RUP87652.1;transl_table=11 RBME01000019.1 Genbank gene 13693 13914 . + . ID=gene-D8M40_10660;Name=D8M40_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10660 RBME01000019.1 Protein Homology CDS 13693 13914 . + 0 ID=cds-RUP87653.1;Parent=gene-D8M40_10660;Dbxref=NCBI_GP:RUP87653.1;Name=RUP87653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527603.1;locus_tag=D8M40_10660;product=glutaredoxin family protein;protein_id=RUP87653.1;transl_table=11 RBME01000019.1 Genbank gene 14340 15872 . + . ID=gene-D8M40_10665;Name=D8M40_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10665 RBME01000019.1 Protein Homology CDS 14340 15872 . + 0 ID=cds-RUP87638.1;Parent=gene-D8M40_10665;Dbxref=NCBI_GP:RUP87638.1;Name=RUP87638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121369.1;locus_tag=D8M40_10665;product=glutamyl-tRNA reductase;protein_id=RUP87638.1;transl_table=11 RBME01000019.1 Genbank gene 15999 16892 . + . ID=gene-D8M40_10670;Name=D8M40_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10670 RBME01000019.1 Protein Homology CDS 15999 16892 . + 0 ID=cds-RUP87639.1;Parent=gene-D8M40_10670;Dbxref=NCBI_GP:RUP87639.1;Name=RUP87639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121368.1;locus_tag=D8M40_10670;product=hydroxymethylbilane synthase;protein_id=RUP87639.1;transl_table=11 RBME01000019.1 Genbank gene 17108 18796 . + . ID=gene-D8M40_10675;Name=D8M40_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10675 RBME01000019.1 Protein Homology CDS 17108 18796 . + 0 ID=cds-RUP87640.1;Parent=gene-D8M40_10675;Dbxref=NCBI_GP:RUP87640.1;Name=RUP87640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121367.1;locus_tag=D8M40_10675;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;protein_id=RUP87640.1;transl_table=11 RBME01000019.1 Genbank gene 18917 19906 . + . ID=gene-D8M40_10680;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=D8M40_10680 RBME01000019.1 Protein Homology CDS 18917 19906 . + 0 ID=cds-RUP87641.1;Parent=gene-D8M40_10680;Dbxref=NCBI_GP:RUP87641.1;Name=RUP87641.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121366.1;locus_tag=D8M40_10680;product=porphobilinogen synthase;protein_id=RUP87641.1;transl_table=11 RBME01000019.1 Genbank gene 20037 20906 . + . ID=gene-D8M40_10685;Name=D8M40_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10685 RBME01000019.1 GeneMarkS+ CDS 20037 20906 . + 0 ID=cds-RUP87642.1;Parent=gene-D8M40_10685;Dbxref=NCBI_GP:RUP87642.1;Name=RUP87642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10685;product=hypothetical protein;protein_id=RUP87642.1;transl_table=11 RBME01000019.1 Genbank gene 20990 22087 . + . ID=gene-D8M40_10690;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=D8M40_10690 RBME01000019.1 Protein Homology CDS 20990 22087 . + 0 ID=cds-RUP87643.1;Parent=gene-D8M40_10690;Dbxref=NCBI_GP:RUP87643.1;Name=RUP87643.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855579.1;locus_tag=D8M40_10690;product=uroporphyrinogen decarboxylase;protein_id=RUP87643.1;transl_table=11 RBME01000019.1 Genbank gene 22374 23849 . + . ID=gene-D8M40_10695;Name=D8M40_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10695 RBME01000019.1 Protein Homology CDS 22374 23849 . + 0 ID=cds-RUP87644.1;Parent=gene-D8M40_10695;Dbxref=NCBI_GP:RUP87644.1;Name=RUP87644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121363.1;locus_tag=D8M40_10695;product=protoporphyrinogen oxidase;protein_id=RUP87644.1;transl_table=11 RBME01000019.1 Genbank gene 24070 25404 . + . ID=gene-D8M40_10700;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=D8M40_10700 RBME01000019.1 Protein Homology CDS 24070 25404 . + 0 ID=cds-RUP87645.1;Parent=gene-D8M40_10700;Dbxref=NCBI_GP:RUP87645.1;Name=RUP87645.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021368.1;locus_tag=D8M40_10700;product=glutamate-1-semialdehyde-2%2C1-aminomutase;protein_id=RUP87645.1;transl_table=11 RBME01000019.1 Genbank gene 25632 26240 . + . ID=gene-D8M40_10705;Name=D8M40_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10705 RBME01000019.1 Protein Homology CDS 25632 26240 . + 0 ID=cds-RUP87654.1;Parent=gene-D8M40_10705;Dbxref=NCBI_GP:RUP87654.1;Name=RUP87654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189767.1;locus_tag=D8M40_10705;product=histidine phosphatase family protein;protein_id=RUP87654.1;transl_table=11 RBME01000019.1 Genbank gene 26322 26948 . + . ID=gene-D8M40_10710;Name=D8M40_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10710 RBME01000019.1 Protein Homology CDS 26322 26948 . + 0 ID=cds-RUP87646.1;Parent=gene-D8M40_10710;Dbxref=NCBI_GP:RUP87646.1;Name=RUP87646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004601491.1;locus_tag=D8M40_10710;product=TlpA family protein disulfide reductase;protein_id=RUP87646.1;transl_table=11 RBME01000019.1 Genbank gene 27108 27905 . + . ID=gene-D8M40_10715;Name=D8M40_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10715 RBME01000019.1 Protein Homology CDS 27108 27905 . + 0 ID=cds-RUP87655.1;Parent=gene-D8M40_10715;Dbxref=NCBI_GP:RUP87655.1;Name=RUP87655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327920.1;locus_tag=D8M40_10715;product=cytochrome c biogenesis protein CcdA;protein_id=RUP87655.1;transl_table=11 RBME01000019.1 Genbank gene 28082 29674 . + . ID=gene-D8M40_10720;Name=D8M40_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10720 RBME01000019.1 Protein Homology CDS 28082 29674 . + 0 ID=cds-RUP87647.1;Parent=gene-D8M40_10720;Dbxref=NCBI_GP:RUP87647.1;Name=RUP87647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121357.1;locus_tag=D8M40_10720;product=cytochrome c biogenesis protein ResB;protein_id=RUP87647.1;transl_table=11 RBME01000019.1 Genbank gene 29937 30929 . + . ID=gene-D8M40_10725;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=D8M40_10725 RBME01000019.1 Protein Homology CDS 29937 30929 . + 0 ID=cds-RUP87648.1;Parent=gene-D8M40_10725;Dbxref=NCBI_GP:RUP87648.1;Name=RUP87648.1;gbkey=CDS;gene=ccsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121356.1;locus_tag=D8M40_10725;product=c-type cytochrome biogenesis protein CcsB;protein_id=RUP87648.1;transl_table=11 RBME01000019.1 Genbank pseudogene 31257 31469 . - . ID=gene-D8M40_10730;Name=D8M40_10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10730;pseudo=true RBME01000019.1 Protein Homology CDS 31257 31469 . - 0 ID=cds-D8M40_10730;Parent=gene-D8M40_10730;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322966.1;locus_tag=D8M40_10730;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000019.1 Genbank gene 31506 31937 . + . ID=gene-D8M40_10735;Name=D8M40_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10735 RBME01000019.1 Protein Homology CDS 31506 31937 . + 0 ID=cds-RUP87649.1;Parent=gene-D8M40_10735;Dbxref=NCBI_GP:RUP87649.1;Name=RUP87649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297830.1;locus_tag=D8M40_10735;product=DUF4229 domain-containing protein;protein_id=RUP87649.1;transl_table=11 RBME01000019.1 Genbank pseudogene 31956 32884 . - . ID=gene-D8M40_10740;Name=D8M40_10740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10740;pseudo=true RBME01000019.1 Protein Homology CDS 31956 32884 . - 0 ID=cds-D8M40_10740;Parent=gene-D8M40_10740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121353.1;locus_tag=D8M40_10740;product=AEC family transporter;pseudo=true;transl_table=11 RBME01000019.1 Genbank gene 33025 33915 . - . ID=gene-D8M40_10745;Name=D8M40_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10745 RBME01000019.1 Protein Homology CDS 33025 33915 . - 0 ID=cds-RUP87650.1;Parent=gene-D8M40_10745;Dbxref=NCBI_GP:RUP87650.1;Name=RUP87650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121352.1;locus_tag=D8M40_10745;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=RUP87650.1;transl_table=11 ##sequence-region RBME01000001.1 1 595695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000001.1 Genbank region 1 595695 . + . ID=RBME01000001.1:1..595695;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000001.1 Genbank gene 781 2451 . + . ID=gene-D8M40_00005;Name=D8M40_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00005 RBME01000001.1 GeneMarkS+ CDS 781 2451 . + 0 ID=cds-RUP90312.1;Parent=gene-D8M40_00005;Dbxref=NCBI_GP:RUP90312.1;Name=RUP90312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00005;product=LPXTG cell wall anchor domain-containing protein;protein_id=RUP90312.1;transl_table=11 RBME01000001.1 Genbank gene 2635 3549 . + . ID=gene-D8M40_00010;Name=D8M40_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00010 RBME01000001.1 Protein Homology CDS 2635 3549 . + 0 ID=cds-RUP90313.1;Parent=gene-D8M40_00010;Dbxref=NCBI_GP:RUP90313.1;Name=RUP90313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120404.1;locus_tag=D8M40_00010;product=class C sortase;protein_id=RUP90313.1;transl_table=11 RBME01000001.1 Genbank pseudogene 3806 3904 . + . ID=gene-D8M40_00015;Name=D8M40_00015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_00015;pseudo=true RBME01000001.1 Protein Homology CDS 3806 3904 . + 0 ID=cds-D8M40_00015;Parent=gene-D8M40_00015;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005964813.1;locus_tag=D8M40_00015;product=transposase;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 4095 4289 . + . ID=gene-D8M40_00020;Name=D8M40_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00020 RBME01000001.1 GeneMarkS+ CDS 4095 4289 . + 0 ID=cds-RUP90314.1;Parent=gene-D8M40_00020;Dbxref=NCBI_GP:RUP90314.1;Name=RUP90314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00020;product=hypothetical protein;protein_id=RUP90314.1;transl_table=11 RBME01000001.1 Genbank gene 4992 6659 . + . ID=gene-D8M40_00025;Name=D8M40_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00025 RBME01000001.1 Protein Homology CDS 4992 6659 . + 0 ID=cds-RUP90315.1;Parent=gene-D8M40_00025;Dbxref=NCBI_GP:RUP90315.1;Name=RUP90315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16555.3;locus_tag=D8M40_00025;product=hypothetical protein;protein_id=RUP90315.1;transl_table=11 RBME01000001.1 Genbank gene 6860 7858 . + . ID=gene-D8M40_00030;Name=D8M40_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00030 RBME01000001.1 Protein Homology CDS 6860 7858 . + 0 ID=cds-RUP90316.1;Parent=gene-D8M40_00030;Dbxref=NCBI_GP:RUP90316.1;Name=RUP90316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120406.1;locus_tag=D8M40_00030;product=sortase;protein_id=RUP90316.1;transl_table=11 RBME01000001.1 Genbank gene 7869 8678 . + . ID=gene-D8M40_00035;Name=D8M40_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00035 RBME01000001.1 GeneMarkS+ CDS 7869 8678 . + 0 ID=cds-RUP90317.1;Parent=gene-D8M40_00035;Dbxref=NCBI_GP:RUP90317.1;Name=RUP90317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00035;product=cell surface protein;protein_id=RUP90317.1;transl_table=11 RBME01000001.1 Genbank gene 8680 10641 . + . ID=gene-D8M40_00040;Name=D8M40_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00040 RBME01000001.1 GeneMarkS+ CDS 8680 10641 . + 0 ID=cds-RUP90318.1;Parent=gene-D8M40_00040;Dbxref=NCBI_GP:RUP90318.1;Name=RUP90318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00040;product=hypothetical protein;protein_id=RUP90318.1;transl_table=11 RBME01000001.1 Genbank gene 10638 11849 . + . ID=gene-D8M40_00045;Name=D8M40_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00045 RBME01000001.1 GeneMarkS+ CDS 10638 11849 . + 0 ID=cds-RUP90319.1;Parent=gene-D8M40_00045;Dbxref=NCBI_GP:RUP90319.1;Name=RUP90319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00045;product=hypothetical protein;protein_id=RUP90319.1;transl_table=11 RBME01000001.1 Genbank gene 12024 12275 . + . ID=gene-D8M40_00050;Name=D8M40_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00050 RBME01000001.1 GeneMarkS+ CDS 12024 12275 . + 0 ID=cds-RUP90320.1;Parent=gene-D8M40_00050;Dbxref=NCBI_GP:RUP90320.1;Name=RUP90320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00050;product=hypothetical protein;protein_id=RUP90320.1;transl_table=11 RBME01000001.1 Genbank gene 12764 13180 . + . ID=gene-D8M40_00055;Name=D8M40_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00055 RBME01000001.1 GeneMarkS+ CDS 12764 13180 . + 0 ID=cds-RUP90321.1;Parent=gene-D8M40_00055;Dbxref=NCBI_GP:RUP90321.1;Name=RUP90321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00055;product=hypothetical protein;protein_id=RUP90321.1;transl_table=11 RBME01000001.1 Genbank gene 13359 13616 . + . ID=gene-D8M40_00060;Name=D8M40_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00060 RBME01000001.1 Protein Homology CDS 13359 13616 . + 0 ID=cds-RUP90322.1;Parent=gene-D8M40_00060;Dbxref=NCBI_GP:RUP90322.1;Name=RUP90322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=D8M40_00060;product=hypothetical protein;protein_id=RUP90322.1;transl_table=11 RBME01000001.1 Genbank gene 13913 14710 . + . ID=gene-D8M40_00065;Name=D8M40_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00065 RBME01000001.1 Protein Homology CDS 13913 14710 . + 0 ID=cds-RUP90768.1;Parent=gene-D8M40_00065;Dbxref=NCBI_GP:RUP90768.1;Name=RUP90768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120414.1;locus_tag=D8M40_00065;product=class E sortase;protein_id=RUP90768.1;transl_table=11 RBME01000001.1 Genbank gene 15223 16896 . + . ID=gene-D8M40_00070;Name=D8M40_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00070 RBME01000001.1 Protein Homology CDS 15223 16896 . + 0 ID=cds-RUP90323.1;Parent=gene-D8M40_00070;Dbxref=NCBI_GP:RUP90323.1;Name=RUP90323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04226;locus_tag=D8M40_00070;product=isopeptide-forming domain-containing fimbrial protein;protein_id=RUP90323.1;transl_table=11 RBME01000001.1 Genbank gene 17068 20088 . + . ID=gene-D8M40_00075;Name=D8M40_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00075 RBME01000001.1 Protein Homology CDS 17068 20088 . + 0 ID=cds-RUP90324.1;Parent=gene-D8M40_00075;Dbxref=NCBI_GP:RUP90324.1;Name=RUP90324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167;locus_tag=D8M40_00075;product=LPXTG cell wall anchor domain-containing protein;protein_id=RUP90324.1;transl_table=11 RBME01000001.1 Genbank gene 20089 21018 . + . ID=gene-D8M40_00080;Name=D8M40_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00080 RBME01000001.1 Protein Homology CDS 20089 21018 . + 0 ID=cds-RUP90325.1;Parent=gene-D8M40_00080;Dbxref=NCBI_GP:RUP90325.1;Name=RUP90325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887798.1;locus_tag=D8M40_00080;product=class C sortase;protein_id=RUP90325.1;transl_table=11 RBME01000001.1 Genbank gene 21029 21895 . + . ID=gene-D8M40_00085;Name=D8M40_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00085 RBME01000001.1 Protein Homology CDS 21029 21895 . + 0 ID=cds-RUP90326.1;Parent=gene-D8M40_00085;Dbxref=NCBI_GP:RUP90326.1;Name=RUP90326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01076;locus_tag=D8M40_00085;product=class C sortase;protein_id=RUP90326.1;transl_table=11 RBME01000001.1 Genbank gene 21905 23374 . + . ID=gene-D8M40_00090;Name=D8M40_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00090 RBME01000001.1 Protein Homology CDS 21905 23374 . + 0 ID=cds-RUP90327.1;Parent=gene-D8M40_00090;Dbxref=NCBI_GP:RUP90327.1;Name=RUP90327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309861.1;locus_tag=D8M40_00090;product=Fic family protein;protein_id=RUP90327.1;transl_table=11 RBME01000001.1 Genbank pseudogene 23423 23524 . - . ID=gene-D8M40_00095;Name=D8M40_00095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_00095;pseudo=true RBME01000001.1 Protein Homology CDS 23423 23524 . - 0 ID=cds-D8M40_00095;Parent=gene-D8M40_00095;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309862.1;locus_tag=D8M40_00095;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 23526 23759 . - . ID=gene-D8M40_00100;Name=D8M40_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00100 RBME01000001.1 GeneMarkS+ CDS 23526 23759 . - 0 ID=cds-RUP90328.1;Parent=gene-D8M40_00100;Dbxref=NCBI_GP:RUP90328.1;Name=RUP90328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00100;product=hypothetical protein;protein_id=RUP90328.1;transl_table=11 RBME01000001.1 Genbank gene 24254 24697 . - . ID=gene-D8M40_00105;Name=D8M40_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00105 RBME01000001.1 GeneMarkS+ CDS 24254 24697 . - 0 ID=cds-RUP90329.1;Parent=gene-D8M40_00105;Dbxref=NCBI_GP:RUP90329.1;Name=RUP90329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00105;product=hypothetical protein;protein_id=RUP90329.1;transl_table=11 RBME01000001.1 Genbank gene 25322 26956 . + . ID=gene-D8M40_00110;Name=D8M40_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00110 RBME01000001.1 Protein Homology CDS 25322 26956 . + 0 ID=cds-RUP90330.1;Parent=gene-D8M40_00110;Dbxref=NCBI_GP:RUP90330.1;Name=RUP90330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327267.1;locus_tag=D8M40_00110;product=TIGR04028 family ABC transporter substrate-binding protein;protein_id=RUP90330.1;transl_table=11 RBME01000001.1 Genbank gene 26956 28002 . + . ID=gene-D8M40_00115;Name=D8M40_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00115 RBME01000001.1 Protein Homology CDS 26956 28002 . + 0 ID=cds-RUP90331.1;Parent=gene-D8M40_00115;Dbxref=NCBI_GP:RUP90331.1;Name=RUP90331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191162.1;locus_tag=D8M40_00115;product=ABC transporter permease;protein_id=RUP90331.1;transl_table=11 RBME01000001.1 Genbank gene 27993 28805 . + . ID=gene-D8M40_00120;Name=D8M40_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00120 RBME01000001.1 Protein Homology CDS 27993 28805 . + 0 ID=cds-RUP90332.1;Parent=gene-D8M40_00120;Dbxref=NCBI_GP:RUP90332.1;Name=RUP90332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327265.1;locus_tag=D8M40_00120;product=ABC transporter permease;protein_id=RUP90332.1;transl_table=11 RBME01000001.1 Genbank gene 28805 30421 . + . ID=gene-D8M40_00125;Name=D8M40_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00125 RBME01000001.1 Protein Homology CDS 28805 30421 . + 0 ID=cds-RUP90333.1;Parent=gene-D8M40_00125;Dbxref=NCBI_GP:RUP90333.1;Name=RUP90333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327264.1;locus_tag=D8M40_00125;product=ABC transporter ATP-binding protein;protein_id=RUP90333.1;transl_table=11 RBME01000001.1 Genbank gene 30485 31753 . + . ID=gene-D8M40_00130;Name=D8M40_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00130 RBME01000001.1 Protein Homology CDS 30485 31753 . + 0 ID=cds-RUP90334.1;Parent=gene-D8M40_00130;Dbxref=NCBI_GP:RUP90334.1;Name=RUP90334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324028.1;locus_tag=D8M40_00130;product=alkylhydroperoxidase domain protein;protein_id=RUP90334.1;transl_table=11 RBME01000001.1 Genbank gene 32121 32756 . - . ID=gene-D8M40_00135;Name=D8M40_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00135 RBME01000001.1 Protein Homology CDS 32121 32756 . - 0 ID=cds-RUP90769.1;Parent=gene-D8M40_00135;Dbxref=NCBI_GP:RUP90769.1;Name=RUP90769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014316495.1;locus_tag=D8M40_00135;product=hypothetical protein;protein_id=RUP90769.1;transl_table=11 RBME01000001.1 Genbank gene 33188 33367 . + . ID=gene-D8M40_00140;Name=D8M40_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00140 RBME01000001.1 GeneMarkS+ CDS 33188 33367 . + 0 ID=cds-RUP90335.1;Parent=gene-D8M40_00140;Dbxref=NCBI_GP:RUP90335.1;Name=RUP90335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00140;product=hypothetical protein;protein_id=RUP90335.1;transl_table=11 RBME01000001.1 Genbank gene 33554 34861 . + . ID=gene-D8M40_00145;Name=D8M40_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00145 RBME01000001.1 Protein Homology CDS 33554 34861 . + 0 ID=cds-RUP90336.1;Parent=gene-D8M40_00145;Dbxref=NCBI_GP:RUP90336.1;Name=RUP90336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120427.1;locus_tag=D8M40_00145;product=DUF3100 domain-containing protein;protein_id=RUP90336.1;transl_table=11 RBME01000001.1 Genbank gene 34938 36161 . + . ID=gene-D8M40_00150;Name=D8M40_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00150 RBME01000001.1 Protein Homology CDS 34938 36161 . + 0 ID=cds-RUP90337.1;Parent=gene-D8M40_00150;Dbxref=NCBI_GP:RUP90337.1;Name=RUP90337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120428.1;locus_tag=D8M40_00150;product=amidohydrolase;protein_id=RUP90337.1;transl_table=11 RBME01000001.1 Genbank gene 36436 38817 . + . ID=gene-D8M40_00155;Name=D8M40_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00155 RBME01000001.1 Protein Homology CDS 36436 38817 . + 0 ID=cds-RUP90338.1;Parent=gene-D8M40_00155;Dbxref=NCBI_GP:RUP90338.1;Name=RUP90338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004051014.1;locus_tag=D8M40_00155;product=hypothetical protein;protein_id=RUP90338.1;transl_table=11 RBME01000001.1 Genbank gene 38962 39660 . + . ID=gene-D8M40_00160;Name=D8M40_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00160 RBME01000001.1 Protein Homology CDS 38962 39660 . + 0 ID=cds-RUP90339.1;Parent=gene-D8M40_00160;Dbxref=NCBI_GP:RUP90339.1;Name=RUP90339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301329.1;locus_tag=D8M40_00160;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=RUP90339.1;transl_table=11 RBME01000001.1 Genbank gene 39709 40617 . - . ID=gene-D8M40_00165;Name=D8M40_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00165 RBME01000001.1 Protein Homology CDS 39709 40617 . - 0 ID=cds-RUP90340.1;Parent=gene-D8M40_00165;Dbxref=NCBI_GP:RUP90340.1;Name=RUP90340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301330.1;locus_tag=D8M40_00165;product=S1 family peptidase;protein_id=RUP90340.1;transl_table=11 RBME01000001.1 Genbank gene 40853 41545 . + . ID=gene-D8M40_00170;Name=D8M40_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00170 RBME01000001.1 Protein Homology CDS 40853 41545 . + 0 ID=cds-RUP90770.1;Parent=gene-D8M40_00170;Dbxref=NCBI_GP:RUP90770.1;Name=RUP90770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120432.1;locus_tag=D8M40_00170;product=GTP pyrophosphokinase;protein_id=RUP90770.1;transl_table=11 RBME01000001.1 Genbank gene 41569 41769 . + . ID=gene-D8M40_00175;Name=D8M40_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00175 RBME01000001.1 Protein Homology CDS 41569 41769 . + 0 ID=cds-RUP90341.1;Parent=gene-D8M40_00175;Dbxref=NCBI_GP:RUP90341.1;Name=RUP90341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013911052.1;locus_tag=D8M40_00175;product=hypothetical protein;protein_id=RUP90341.1;transl_table=11 RBME01000001.1 Genbank pseudogene 41984 43213 . + . ID=gene-D8M40_00180;Name=D8M40_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_00180;pseudo=true RBME01000001.1 Protein Homology CDS 41984 43213 . + 0 ID=cds-D8M40_00180;Parent=gene-D8M40_00180;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120434.1;locus_tag=D8M40_00180;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 43215 43457 . - . ID=gene-D8M40_00185;Name=D8M40_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00185 RBME01000001.1 GeneMarkS+ CDS 43215 43457 . - 0 ID=cds-RUP90342.1;Parent=gene-D8M40_00185;Dbxref=NCBI_GP:RUP90342.1;Name=RUP90342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00185;product=hypothetical protein;protein_id=RUP90342.1;transl_table=11 RBME01000001.1 Genbank gene 43859 44950 . - . ID=gene-D8M40_00190;Name=D8M40_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00190 RBME01000001.1 Protein Homology CDS 43859 44950 . - 0 ID=cds-RUP90343.1;Parent=gene-D8M40_00190;Dbxref=NCBI_GP:RUP90343.1;Name=RUP90343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010121609.1;locus_tag=D8M40_00190;product=2%2C3-butanediol dehydrogenase;protein_id=RUP90343.1;transl_table=11 RBME01000001.1 Genbank gene 45162 45593 . + . ID=gene-D8M40_00195;Name=D8M40_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00195 RBME01000001.1 Protein Homology CDS 45162 45593 . + 0 ID=cds-RUP90344.1;Parent=gene-D8M40_00195;Dbxref=NCBI_GP:RUP90344.1;Name=RUP90344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281716.1;locus_tag=D8M40_00195;product=hypothetical protein;protein_id=RUP90344.1;transl_table=11 RBME01000001.1 Genbank gene 45590 46024 . + . ID=gene-D8M40_00200;Name=D8M40_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00200 RBME01000001.1 Protein Homology CDS 45590 46024 . + 0 ID=cds-RUP90345.1;Parent=gene-D8M40_00200;Dbxref=NCBI_GP:RUP90345.1;Name=RUP90345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01934.15;locus_tag=D8M40_00200;product=DUF86 domain-containing protein;protein_id=RUP90345.1;transl_table=11 RBME01000001.1 Genbank gene 46027 46536 . - . ID=gene-D8M40_00205;Name=D8M40_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00205 RBME01000001.1 Protein Homology CDS 46027 46536 . - 0 ID=cds-RUP90771.1;Parent=gene-D8M40_00205;Dbxref=NCBI_GP:RUP90771.1;Name=RUP90771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281714.1;locus_tag=D8M40_00205;product=2'-5' RNA ligase;protein_id=RUP90771.1;transl_table=11 RBME01000001.1 Genbank gene 46690 48879 . - . ID=gene-D8M40_00210;Name=D8M40_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00210 RBME01000001.1 Protein Homology CDS 46690 48879 . - 0 ID=cds-RUP90346.1;Parent=gene-D8M40_00210;Dbxref=NCBI_GP:RUP90346.1;Name=RUP90346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327757.1;locus_tag=D8M40_00210;product=YhgE/Pip domain-containing protein;protein_id=RUP90346.1;transl_table=11 RBME01000001.1 Genbank gene 48876 51419 . - . ID=gene-D8M40_00215;Name=D8M40_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00215 RBME01000001.1 Protein Homology CDS 48876 51419 . - 0 ID=cds-RUP90772.1;Parent=gene-D8M40_00215;Dbxref=NCBI_GP:RUP90772.1;Name=RUP90772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014010501.1;locus_tag=D8M40_00215;product=YhgE/Pip domain-containing protein;protein_id=RUP90772.1;transl_table=11 RBME01000001.1 Genbank gene 51516 52625 . - . ID=gene-D8M40_00220;Name=D8M40_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00220 RBME01000001.1 Protein Homology CDS 51516 52625 . - 0 ID=cds-RUP90347.1;Parent=gene-D8M40_00220;Dbxref=NCBI_GP:RUP90347.1;Name=RUP90347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02104.13;locus_tag=D8M40_00220;product=SURF1 family protein;protein_id=RUP90347.1;transl_table=11 RBME01000001.1 Genbank gene 52658 53173 . - . ID=gene-D8M40_00225;Name=D8M40_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00225 RBME01000001.1 Protein Homology CDS 52658 53173 . - 0 ID=cds-RUP90348.1;Parent=gene-D8M40_00225;Dbxref=NCBI_GP:RUP90348.1;Name=RUP90348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120443.1;locus_tag=D8M40_00225;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=RUP90348.1;transl_table=11 RBME01000001.1 Genbank gene 53253 54401 . + . ID=gene-D8M40_00230;Name=D8M40_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00230 RBME01000001.1 Protein Homology CDS 53253 54401 . + 0 ID=cds-RUP90349.1;Parent=gene-D8M40_00230;Dbxref=NCBI_GP:RUP90349.1;Name=RUP90349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120444.1;locus_tag=D8M40_00230;product=Nif3-like dinuclear metal center hexameric protein;protein_id=RUP90349.1;transl_table=11 RBME01000001.1 Genbank gene 54522 55319 . + . ID=gene-D8M40_00235;Name=D8M40_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00235 RBME01000001.1 Protein Homology CDS 54522 55319 . + 0 ID=cds-RUP90773.1;Parent=gene-D8M40_00235;Dbxref=NCBI_GP:RUP90773.1;Name=RUP90773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190637.1;locus_tag=D8M40_00235;product=hypothetical protein;protein_id=RUP90773.1;transl_table=11 RBME01000001.1 Genbank gene 55333 56487 . + . ID=gene-D8M40_00240;Name=D8M40_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00240 RBME01000001.1 Protein Homology CDS 55333 56487 . + 0 ID=cds-RUP90350.1;Parent=gene-D8M40_00240;Dbxref=NCBI_GP:RUP90350.1;Name=RUP90350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278218.1;locus_tag=D8M40_00240;product=bifunctional RNase H/acid phosphatase;protein_id=RUP90350.1;transl_table=11 RBME01000001.1 Genbank gene 56585 57019 . + . ID=gene-D8M40_00245;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=D8M40_00245 RBME01000001.1 cmsearch RNase_P_RNA 56585 57019 . + . ID=rna-D8M40_00245;Parent=gene-D8M40_00245;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_00245;product=RNase P RNA component class A RBME01000001.1 cmsearch exon 56585 57019 . + . ID=exon-D8M40_00245-1;Parent=rna-D8M40_00245;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_00245;product=RNase P RNA component class A RBME01000001.1 Genbank gene 57050 58564 . - . ID=gene-D8M40_00250;Name=D8M40_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00250 RBME01000001.1 Protein Homology CDS 57050 58564 . - 0 ID=cds-RUP90351.1;Parent=gene-D8M40_00250;Dbxref=NCBI_GP:RUP90351.1;Name=RUP90351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120448.1;locus_tag=D8M40_00250;product=galactokinase;protein_id=RUP90351.1;transl_table=11 RBME01000001.1 Genbank gene 58847 59059 . + . ID=gene-D8M40_00255;Name=D8M40_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00255 RBME01000001.1 Protein Homology CDS 58847 59059 . + 0 ID=cds-RUP90352.1;Parent=gene-D8M40_00255;Dbxref=NCBI_GP:RUP90352.1;Name=RUP90352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120449.1;locus_tag=D8M40_00255;product=hypothetical protein;protein_id=RUP90352.1;transl_table=11 RBME01000001.1 Genbank gene 59106 60443 . + . ID=gene-D8M40_00260;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D8M40_00260 RBME01000001.1 Protein Homology CDS 59106 60443 . + 0 ID=cds-RUP90353.1;Parent=gene-D8M40_00260;Dbxref=NCBI_GP:RUP90353.1;Name=RUP90353.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190629.1;locus_tag=D8M40_00260;product=type I glutamate--ammonia ligase;protein_id=RUP90353.1;transl_table=11 RBME01000001.1 Genbank gene 60559 63798 . + . ID=gene-D8M40_00265;Name=D8M40_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00265 RBME01000001.1 Protein Homology CDS 60559 63798 . + 0 ID=cds-RUP90354.1;Parent=gene-D8M40_00265;Dbxref=NCBI_GP:RUP90354.1;Name=RUP90354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120451.1;locus_tag=D8M40_00265;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=RUP90354.1;transl_table=11 RBME01000001.1 Genbank gene 63865 64347 . + . ID=gene-D8M40_00270;Name=D8M40_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00270 RBME01000001.1 GeneMarkS+ CDS 63865 64347 . + 0 ID=cds-RUP90355.1;Parent=gene-D8M40_00270;Dbxref=NCBI_GP:RUP90355.1;Name=RUP90355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00270;product=hypothetical protein;protein_id=RUP90355.1;transl_table=11 RBME01000001.1 Genbank gene 64482 65057 . + . ID=gene-D8M40_00275;Name=D8M40_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00275 RBME01000001.1 GeneMarkS+ CDS 64482 65057 . + 0 ID=cds-RUP90356.1;Parent=gene-D8M40_00275;Dbxref=NCBI_GP:RUP90356.1;Name=RUP90356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00275;product=hypothetical protein;protein_id=RUP90356.1;transl_table=11 RBME01000001.1 Genbank gene 65103 66599 . - . ID=gene-D8M40_00280;Name=D8M40_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00280 RBME01000001.1 Protein Homology CDS 65103 66599 . - 0 ID=cds-RUP90357.1;Parent=gene-D8M40_00280;Dbxref=NCBI_GP:RUP90357.1;Name=RUP90357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120454.1;locus_tag=D8M40_00280;product=MFS transporter;protein_id=RUP90357.1;transl_table=11 RBME01000001.1 Genbank gene 66635 68092 . + . ID=gene-D8M40_00285;Name=D8M40_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00285 RBME01000001.1 Protein Homology CDS 66635 68092 . + 0 ID=cds-RUP90774.1;Parent=gene-D8M40_00285;Dbxref=NCBI_GP:RUP90774.1;Name=RUP90774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822068.1;locus_tag=D8M40_00285;product=threonine synthase;protein_id=RUP90774.1;transl_table=11 RBME01000001.1 Genbank gene 68001 69209 . + . ID=gene-D8M40_00290;Name=D8M40_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00290 RBME01000001.1 Protein Homology CDS 68001 69209 . + 0 ID=cds-RUP90358.1;Parent=gene-D8M40_00290;Dbxref=NCBI_GP:RUP90358.1;Name=RUP90358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=D8M40_00290;product=trypsin;protein_id=RUP90358.1;transl_table=11 RBME01000001.1 Genbank gene 69317 69856 . + . ID=gene-D8M40_00295;Name=D8M40_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00295 RBME01000001.1 Protein Homology CDS 69317 69856 . + 0 ID=cds-RUP90359.1;Parent=gene-D8M40_00295;Dbxref=NCBI_GP:RUP90359.1;Name=RUP90359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120457.1;locus_tag=D8M40_00295;product=NUDIX domain-containing protein;protein_id=RUP90359.1;transl_table=11 RBME01000001.1 Genbank gene 69849 70886 . + . ID=gene-D8M40_00300;Name=D8M40_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00300 RBME01000001.1 Protein Homology CDS 69849 70886 . + 0 ID=cds-RUP90360.1;Parent=gene-D8M40_00300;Dbxref=NCBI_GP:RUP90360.1;Name=RUP90360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00657.20;locus_tag=D8M40_00300;product=SGNH/GDSL hydrolase family protein;protein_id=RUP90360.1;transl_table=11 RBME01000001.1 Genbank gene 70941 71429 . + . ID=gene-D8M40_00305;Name=D8M40_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00305 RBME01000001.1 Protein Homology CDS 70941 71429 . + 0 ID=cds-RUP90361.1;Parent=gene-D8M40_00305;Dbxref=NCBI_GP:RUP90361.1;Name=RUP90361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328129.1;locus_tag=D8M40_00305;product=RDD family protein;protein_id=RUP90361.1;transl_table=11 RBME01000001.1 Genbank gene 71436 72215 . - . ID=gene-D8M40_00310;Name=D8M40_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00310 RBME01000001.1 Protein Homology CDS 71436 72215 . - 0 ID=cds-RUP90362.1;Parent=gene-D8M40_00310;Dbxref=NCBI_GP:RUP90362.1;Name=RUP90362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849048.1;locus_tag=D8M40_00310;product=DUF4191 domain-containing protein;protein_id=RUP90362.1;transl_table=11 RBME01000001.1 Genbank gene 72336 73379 . - . ID=gene-D8M40_00315;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=D8M40_00315 RBME01000001.1 Protein Homology CDS 72336 73379 . - 0 ID=cds-RUP90363.1;Parent=gene-D8M40_00315;Dbxref=NCBI_GP:RUP90363.1;Name=RUP90363.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839908.1;locus_tag=D8M40_00315;product=lipoyl synthase;protein_id=RUP90363.1;transl_table=11 RBME01000001.1 Genbank gene 73459 74220 . - . ID=gene-D8M40_00320;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=D8M40_00320 RBME01000001.1 Protein Homology CDS 73459 74220 . - 0 ID=cds-RUP90364.1;Parent=gene-D8M40_00320;Dbxref=NCBI_GP:RUP90364.1;Name=RUP90364.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120462.1;locus_tag=D8M40_00320;product=lipoyl(octanoyl) transferase LipB;protein_id=RUP90364.1;transl_table=11 RBME01000001.1 Genbank gene 74289 75440 . - . ID=gene-D8M40_00325;Name=D8M40_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00325 RBME01000001.1 Protein Homology CDS 74289 75440 . - 0 ID=cds-RUP90365.1;Parent=gene-D8M40_00325;Dbxref=NCBI_GP:RUP90365.1;Name=RUP90365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120463.1;locus_tag=D8M40_00325;product=MFS transporter;protein_id=RUP90365.1;transl_table=11 RBME01000001.1 Genbank gene 75705 77858 . - . ID=gene-D8M40_00330;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=D8M40_00330 RBME01000001.1 Protein Homology CDS 75705 77858 . - 0 ID=cds-RUP90366.1;Parent=gene-D8M40_00330;Dbxref=NCBI_GP:RUP90366.1;Name=RUP90366.1;gbkey=CDS;gene=sucB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120464.1;locus_tag=D8M40_00330;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=RUP90366.1;transl_table=11 RBME01000001.1 Genbank gene 77985 78377 . + . ID=gene-D8M40_00335;Name=D8M40_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00335 RBME01000001.1 Protein Homology CDS 77985 78377 . + 0 ID=cds-RUP90367.1;Parent=gene-D8M40_00335;Dbxref=NCBI_GP:RUP90367.1;Name=RUP90367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117557.1;locus_tag=D8M40_00335;product=oxidoreductase;protein_id=RUP90367.1;transl_table=11 RBME01000001.1 Genbank gene 78416 79951 . - . ID=gene-D8M40_00340;Name=D8M40_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00340 RBME01000001.1 Protein Homology CDS 78416 79951 . - 0 ID=cds-RUP90368.1;Parent=gene-D8M40_00340;Dbxref=NCBI_GP:RUP90368.1;Name=RUP90368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120466.1;locus_tag=D8M40_00340;product=leucyl aminopeptidase;protein_id=RUP90368.1;transl_table=11 RBME01000001.1 Genbank gene 80089 81177 . + . ID=gene-D8M40_00345;Name=D8M40_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00345 RBME01000001.1 Protein Homology CDS 80089 81177 . + 0 ID=cds-RUP90369.1;Parent=gene-D8M40_00345;Dbxref=NCBI_GP:RUP90369.1;Name=RUP90369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120467.1;locus_tag=D8M40_00345;product=branched-chain amino acid aminotransferase;protein_id=RUP90369.1;transl_table=11 RBME01000001.1 Genbank gene 81174 82103 . - . ID=gene-D8M40_00350;Name=D8M40_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00350 RBME01000001.1 Protein Homology CDS 81174 82103 . - 0 ID=cds-RUP90370.1;Parent=gene-D8M40_00350;Dbxref=NCBI_GP:RUP90370.1;Name=RUP90370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02277.15;locus_tag=D8M40_00350;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=RUP90370.1;transl_table=11 RBME01000001.1 Genbank gene 82156 82926 . - . ID=gene-D8M40_00355;Name=D8M40_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00355 RBME01000001.1 Protein Homology CDS 82156 82926 . - 0 ID=cds-RUP90371.1;Parent=gene-D8M40_00355;Dbxref=NCBI_GP:RUP90371.1;Name=RUP90371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297115.1;locus_tag=D8M40_00355;product=DUF3043 domain-containing protein;protein_id=RUP90371.1;transl_table=11 RBME01000001.1 Genbank gene 83058 83402 . + . ID=gene-D8M40_00360;Name=D8M40_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00360 RBME01000001.1 Protein Homology CDS 83058 83402 . + 0 ID=cds-RUP90372.1;Parent=gene-D8M40_00360;Dbxref=NCBI_GP:RUP90372.1;Name=RUP90372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845178.1;locus_tag=D8M40_00360;product=iron-sulfur cluster assembly accessory protein;protein_id=RUP90372.1;transl_table=11 RBME01000001.1 Genbank gene 83620 85542 . - . ID=gene-D8M40_00365;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=D8M40_00365 RBME01000001.1 Protein Homology CDS 83620 85542 . - 0 ID=cds-RUP90373.1;Parent=gene-D8M40_00365;Dbxref=NCBI_GP:RUP90373.1;Name=RUP90373.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601400.1;locus_tag=D8M40_00365;product=asparagine synthase (glutamine-hydrolyzing);protein_id=RUP90373.1;transl_table=11 RBME01000001.1 Genbank gene 85964 87055 . + . ID=gene-D8M40_00370;Name=D8M40_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00370 RBME01000001.1 Protein Homology CDS 85964 87055 . + 0 ID=cds-RUP90374.1;Parent=gene-D8M40_00370;Dbxref=NCBI_GP:RUP90374.1;Name=RUP90374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845183.1;locus_tag=D8M40_00370;product=cytochrome c oxidase subunit II;protein_id=RUP90374.1;transl_table=11 RBME01000001.1 Genbank gene 87076 87507 . + . ID=gene-D8M40_00375;Name=D8M40_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00375 RBME01000001.1 Protein Homology CDS 87076 87507 . + 0 ID=cds-RUP90375.1;Parent=gene-D8M40_00375;Dbxref=NCBI_GP:RUP90375.1;Name=RUP90375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005521772.1;locus_tag=D8M40_00375;product=cytochrome-c oxidase;protein_id=RUP90375.1;transl_table=11 RBME01000001.1 Genbank gene 88037 88651 . + . ID=gene-D8M40_00380;Name=D8M40_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00380 RBME01000001.1 Protein Homology CDS 88037 88651 . + 0 ID=cds-RUP90775.1;Parent=gene-D8M40_00380;Dbxref=NCBI_GP:RUP90775.1;Name=RUP90775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011014948.1;locus_tag=D8M40_00380;product=heme-copper oxidase subunit III;protein_id=RUP90775.1;transl_table=11 RBME01000001.1 Genbank gene 88716 89609 . + . ID=gene-D8M40_00385;Name=D8M40_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00385 RBME01000001.1 Protein Homology CDS 88716 89609 . + 0 ID=cds-RUP90376.1;Parent=gene-D8M40_00385;Dbxref=NCBI_GP:RUP90376.1;Name=RUP90376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768085.1;locus_tag=D8M40_00385;product=cytochrome C;protein_id=RUP90376.1;transl_table=11 RBME01000001.1 Genbank gene 89609 90829 . + . ID=gene-D8M40_00390;Name=D8M40_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00390 RBME01000001.1 Protein Homology CDS 89609 90829 . + 0 ID=cds-RUP90377.1;Parent=gene-D8M40_00390;Dbxref=NCBI_GP:RUP90377.1;Name=RUP90377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278354.1;locus_tag=D8M40_00390;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=RUP90377.1;transl_table=11 RBME01000001.1 Genbank gene 90829 92457 . + . ID=gene-D8M40_00395;Name=D8M40_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00395 RBME01000001.1 Protein Homology CDS 90829 92457 . + 0 ID=cds-RUP90378.1;Parent=gene-D8M40_00395;Dbxref=NCBI_GP:RUP90378.1;Name=RUP90378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528662.1;locus_tag=D8M40_00395;product=cytochrome bc complex cytochrome b subunit;protein_id=RUP90378.1;transl_table=11 RBME01000001.1 Genbank gene 92731 93039 . + . ID=gene-D8M40_00400;Name=D8M40_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00400 RBME01000001.1 GeneMarkS+ CDS 92731 93039 . + 0 ID=cds-RUP90379.1;Parent=gene-D8M40_00400;Dbxref=NCBI_GP:RUP90379.1;Name=RUP90379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00400;product=hypothetical protein;protein_id=RUP90379.1;transl_table=11 RBME01000001.1 Genbank gene 93153 93749 . + . ID=gene-D8M40_00405;Name=D8M40_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00405 RBME01000001.1 Protein Homology CDS 93153 93749 . + 0 ID=cds-RUP90380.1;Parent=gene-D8M40_00405;Dbxref=NCBI_GP:RUP90380.1;Name=RUP90380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324468.1;locus_tag=D8M40_00405;product=peptidoglycan endopeptidase;protein_id=RUP90380.1;transl_table=11 RBME01000001.1 Genbank gene 93836 94873 . + . ID=gene-D8M40_00410;Name=D8M40_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00410 RBME01000001.1 Protein Homology CDS 93836 94873 . + 0 ID=cds-RUP90381.1;Parent=gene-D8M40_00410;Dbxref=NCBI_GP:RUP90381.1;Name=RUP90381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00877.17;locus_tag=D8M40_00410;product=hydrolase;protein_id=RUP90381.1;transl_table=11 RBME01000001.1 Genbank gene 95028 95990 . + . ID=gene-D8M40_00415;Name=D8M40_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00415 RBME01000001.1 Protein Homology CDS 95028 95990 . + 0 ID=cds-RUP90776.1;Parent=gene-D8M40_00415;Dbxref=NCBI_GP:RUP90776.1;Name=RUP90776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297102.1;locus_tag=D8M40_00415;product=ROK family protein;protein_id=RUP90776.1;transl_table=11 RBME01000001.1 Genbank gene 96033 96773 . + . ID=gene-D8M40_00420;Name=D8M40_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00420 RBME01000001.1 Protein Homology CDS 96033 96773 . + 0 ID=cds-RUP90777.1;Parent=gene-D8M40_00420;Dbxref=NCBI_GP:RUP90777.1;Name=RUP90777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120482.1;locus_tag=D8M40_00420;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RUP90777.1;transl_table=11 RBME01000001.1 Genbank gene 96789 97889 . + . ID=gene-D8M40_00425;Name=D8M40_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00425 RBME01000001.1 Protein Homology CDS 96789 97889 . + 0 ID=cds-RUP90382.1;Parent=gene-D8M40_00425;Dbxref=NCBI_GP:RUP90382.1;Name=RUP90382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01757.20;locus_tag=D8M40_00425;product=hypothetical protein;protein_id=RUP90382.1;transl_table=11 RBME01000001.1 Genbank gene 98230 98745 . + . ID=gene-D8M40_00430;Name=D8M40_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00430 RBME01000001.1 Protein Homology CDS 98230 98745 . + 0 ID=cds-RUP90383.1;Parent=gene-D8M40_00430;Dbxref=NCBI_GP:RUP90383.1;Name=RUP90383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014401275.1;locus_tag=D8M40_00430;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=RUP90383.1;transl_table=11 RBME01000001.1 Genbank gene 98778 100166 . + . ID=gene-D8M40_00435;Name=D8M40_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00435 RBME01000001.1 Protein Homology CDS 98778 100166 . + 0 ID=cds-RUP90384.1;Parent=gene-D8M40_00435;Dbxref=NCBI_GP:RUP90384.1;Name=RUP90384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016829510.1;locus_tag=D8M40_00435;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=RUP90384.1;transl_table=11 RBME01000001.1 Genbank gene 100264 101682 . - . ID=gene-D8M40_00440;Name=D8M40_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00440 RBME01000001.1 Protein Homology CDS 100264 101682 . - 0 ID=cds-RUP90385.1;Parent=gene-D8M40_00440;Dbxref=NCBI_GP:RUP90385.1;Name=RUP90385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120487.1;locus_tag=D8M40_00440;product=serine/threonine protein kinase;protein_id=RUP90385.1;transl_table=11 RBME01000001.1 Genbank gene 101846 102229 . + . ID=gene-D8M40_00445;Name=D8M40_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00445 RBME01000001.1 Protein Homology CDS 101846 102229 . + 0 ID=cds-RUP90386.1;Parent=gene-D8M40_00445;Dbxref=NCBI_GP:RUP90386.1;Name=RUP90386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401328.1;locus_tag=D8M40_00445;product=DNA-binding protein;protein_id=RUP90386.1;transl_table=11 RBME01000001.1 Genbank gene 102198 103754 . - . ID=gene-D8M40_00450;Name=D8M40_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00450 RBME01000001.1 Protein Homology CDS 102198 103754 . - 0 ID=cds-RUP90387.1;Parent=gene-D8M40_00450;Dbxref=NCBI_GP:RUP90387.1;Name=RUP90387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120489.1;locus_tag=D8M40_00450;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=RUP90387.1;transl_table=11 RBME01000001.1 Genbank gene 103754 104881 . - . ID=gene-D8M40_00455;Name=D8M40_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00455 RBME01000001.1 Protein Homology CDS 103754 104881 . - 0 ID=cds-RUP90388.1;Parent=gene-D8M40_00455;Dbxref=NCBI_GP:RUP90388.1;Name=RUP90388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120490.1;locus_tag=D8M40_00455;product=polyprenyl synthetase family protein;protein_id=RUP90388.1;transl_table=11 RBME01000001.1 Genbank gene 104985 105554 . - . ID=gene-D8M40_00460;Name=D8M40_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00460 RBME01000001.1 Protein Homology CDS 104985 105554 . - 0 ID=cds-RUP90389.1;Parent=gene-D8M40_00460;Dbxref=NCBI_GP:RUP90389.1;Name=RUP90389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120491.1;locus_tag=D8M40_00460;product=GNAT family N-acetyltransferase;protein_id=RUP90389.1;transl_table=11 RBME01000001.1 Genbank gene 105700 106224 . + . ID=gene-D8M40_00465;Name=D8M40_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00465 RBME01000001.1 GeneMarkS+ CDS 105700 106224 . + 0 ID=cds-RUP90390.1;Parent=gene-D8M40_00465;Dbxref=NCBI_GP:RUP90390.1;Name=RUP90390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00465;product=hypothetical protein;protein_id=RUP90390.1;transl_table=11 RBME01000001.1 Genbank gene 106407 106865 . + . ID=gene-D8M40_00470;Name=D8M40_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00470 RBME01000001.1 Protein Homology CDS 106407 106865 . + 0 ID=cds-RUP90778.1;Parent=gene-D8M40_00470;Dbxref=NCBI_GP:RUP90778.1;Name=RUP90778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856551.1;locus_tag=D8M40_00470;product=DUF3040 domain-containing protein;protein_id=RUP90778.1;transl_table=11 RBME01000001.1 Genbank gene 107497 107931 . + . ID=gene-D8M40_00475;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=D8M40_00475 RBME01000001.1 Protein Homology CDS 107497 107931 . + 0 ID=cds-RUP90391.1;Parent=gene-D8M40_00475;Dbxref=NCBI_GP:RUP90391.1;Name=RUP90391.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839943.1;locus_tag=D8M40_00475;product=transcriptional regulator MraZ;protein_id=RUP90391.1;transl_table=11 RBME01000001.1 Genbank gene 108076 109212 . + . ID=gene-D8M40_00480;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=D8M40_00480 RBME01000001.1 Protein Homology CDS 108076 109212 . + 0 ID=cds-RUP90392.1;Parent=gene-D8M40_00480;Dbxref=NCBI_GP:RUP90392.1;Name=RUP90392.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120495.1;locus_tag=D8M40_00480;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=RUP90392.1;transl_table=11 RBME01000001.1 Genbank gene 109215 110117 . + . ID=gene-D8M40_00485;Name=D8M40_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00485 RBME01000001.1 GeneMarkS+ CDS 109215 110117 . + 0 ID=cds-RUP90393.1;Parent=gene-D8M40_00485;Dbxref=NCBI_GP:RUP90393.1;Name=RUP90393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00485;product=hypothetical protein;protein_id=RUP90393.1;transl_table=11 RBME01000001.1 Genbank gene 110140 112179 . + . ID=gene-D8M40_00490;Name=D8M40_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00490 RBME01000001.1 Protein Homology CDS 110140 112179 . + 0 ID=cds-RUP90394.1;Parent=gene-D8M40_00490;Dbxref=NCBI_GP:RUP90394.1;Name=RUP90394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120497.1;locus_tag=D8M40_00490;product=penicillin-binding protein 2;protein_id=RUP90394.1;transl_table=11 RBME01000001.1 Genbank gene 112283 113851 . + . ID=gene-D8M40_00495;Name=D8M40_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00495 RBME01000001.1 Protein Homology CDS 112283 113851 . + 0 ID=cds-RUP90395.1;Parent=gene-D8M40_00495;Dbxref=NCBI_GP:RUP90395.1;Name=RUP90395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120498.1;locus_tag=D8M40_00495;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=RUP90395.1;transl_table=11 RBME01000001.1 Genbank gene 113851 115362 . + . ID=gene-D8M40_00500;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=D8M40_00500 RBME01000001.1 Protein Homology CDS 113851 115362 . + 0 ID=cds-RUP90396.1;Parent=gene-D8M40_00500;Dbxref=NCBI_GP:RUP90396.1;Name=RUP90396.1;gbkey=CDS;gene=murF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120499.1;locus_tag=D8M40_00500;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=RUP90396.1;transl_table=11 RBME01000001.1 Genbank gene 115436 116533 . + . ID=gene-D8M40_00505;Name=D8M40_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00505 RBME01000001.1 Protein Homology CDS 115436 116533 . + 0 ID=cds-RUP90397.1;Parent=gene-D8M40_00505;Dbxref=NCBI_GP:RUP90397.1;Name=RUP90397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120500.1;locus_tag=D8M40_00505;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=RUP90397.1;transl_table=11 RBME01000001.1 Genbank gene 116603 118054 . + . ID=gene-D8M40_00510;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=D8M40_00510 RBME01000001.1 Protein Homology CDS 116603 118054 . + 0 ID=cds-RUP90779.1;Parent=gene-D8M40_00510;Dbxref=NCBI_GP:RUP90779.1;Name=RUP90779.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823507.1;locus_tag=D8M40_00510;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=RUP90779.1;transl_table=11 RBME01000001.1 Genbank gene 118114 119568 . + . ID=gene-D8M40_00515;Name=D8M40_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00515 RBME01000001.1 Protein Homology CDS 118114 119568 . + 0 ID=cds-RUP90398.1;Parent=gene-D8M40_00515;Dbxref=NCBI_GP:RUP90398.1;Name=RUP90398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120502.1;locus_tag=D8M40_00515;product=cell division protein FtsW;protein_id=RUP90398.1;transl_table=11 RBME01000001.1 Genbank gene 119541 120704 . + . ID=gene-D8M40_00520;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=D8M40_00520 RBME01000001.1 Protein Homology CDS 119541 120704 . + 0 ID=cds-RUP90399.1;Parent=gene-D8M40_00520;Dbxref=NCBI_GP:RUP90399.1;Name=RUP90399.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190529.1;locus_tag=D8M40_00520;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=RUP90399.1;transl_table=11 RBME01000001.1 Genbank gene 120782 122305 . + . ID=gene-D8M40_00525;Name=D8M40_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00525 RBME01000001.1 Protein Homology CDS 120782 122305 . + 0 ID=cds-RUP90400.1;Parent=gene-D8M40_00525;Dbxref=NCBI_GP:RUP90400.1;Name=RUP90400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297079.1;locus_tag=D8M40_00525;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=RUP90400.1;transl_table=11 RBME01000001.1 Genbank gene 122308 122964 . + . ID=gene-D8M40_00530;Name=D8M40_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00530 RBME01000001.1 Protein Homology CDS 122308 122964 . + 0 ID=cds-RUP90401.1;Parent=gene-D8M40_00530;Dbxref=NCBI_GP:RUP90401.1;Name=RUP90401.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08478.8;locus_tag=D8M40_00530;product=FtsQ-type POTRA domain-containing protein;protein_id=RUP90401.1;transl_table=11 RBME01000001.1 Genbank gene 123198 124442 . + . ID=gene-D8M40_00535;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=D8M40_00535 RBME01000001.1 Protein Homology CDS 123198 124442 . + 0 ID=cds-RUP90402.1;Parent=gene-D8M40_00535;Dbxref=NCBI_GP:RUP90402.1;Name=RUP90402.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401310.1;locus_tag=D8M40_00535;product=cell division protein FtsZ;protein_id=RUP90402.1;transl_table=11 RBME01000001.1 Genbank gene 124458 125231 . + . ID=gene-D8M40_00540;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=D8M40_00540 RBME01000001.1 Protein Homology CDS 124458 125231 . + 0 ID=cds-RUP90403.1;Parent=gene-D8M40_00540;Dbxref=NCBI_GP:RUP90403.1;Name=RUP90403.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120507.1;locus_tag=D8M40_00540;product=peptidoglycan editing factor PgeF;protein_id=RUP90403.1;transl_table=11 RBME01000001.1 Genbank gene 125234 125974 . + . ID=gene-D8M40_00545;Name=D8M40_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00545 RBME01000001.1 Protein Homology CDS 125234 125974 . + 0 ID=cds-RUP90404.1;Parent=gene-D8M40_00545;Dbxref=NCBI_GP:RUP90404.1;Name=RUP90404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120508.1;locus_tag=D8M40_00545;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=RUP90404.1;transl_table=11 RBME01000001.1 Genbank gene 126054 126632 . + . ID=gene-D8M40_00550;Name=D8M40_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00550 RBME01000001.1 Protein Homology CDS 126054 126632 . + 0 ID=cds-RUP90405.1;Parent=gene-D8M40_00550;Dbxref=NCBI_GP:RUP90405.1;Name=RUP90405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401307.1;locus_tag=D8M40_00550;product=cell division protein SepF;protein_id=RUP90405.1;transl_table=11 RBME01000001.1 Genbank gene 126745 127044 . + . ID=gene-D8M40_00555;Name=D8M40_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00555 RBME01000001.1 Protein Homology CDS 126745 127044 . + 0 ID=cds-RUP90406.1;Parent=gene-D8M40_00555;Dbxref=NCBI_GP:RUP90406.1;Name=RUP90406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324523.1;locus_tag=D8M40_00555;product=YggT family protein;protein_id=RUP90406.1;transl_table=11 RBME01000001.1 Genbank gene 127236 128309 . + . ID=gene-D8M40_00560;Name=D8M40_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00560 RBME01000001.1 Protein Homology CDS 127236 128309 . + 0 ID=cds-RUP90407.1;Parent=gene-D8M40_00560;Dbxref=NCBI_GP:RUP90407.1;Name=RUP90407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297072.1;locus_tag=D8M40_00560;product=DivIVA domain-containing protein;protein_id=RUP90407.1;transl_table=11 RBME01000001.1 Genbank gene 128480 129967 . - . ID=gene-D8M40_00565;Name=D8M40_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00565 RBME01000001.1 Protein Homology CDS 128480 129967 . - 0 ID=cds-RUP90408.1;Parent=gene-D8M40_00565;Dbxref=NCBI_GP:RUP90408.1;Name=RUP90408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010524085.1;locus_tag=D8M40_00565;product=sodium:glutamate symporter;protein_id=RUP90408.1;transl_table=11 RBME01000001.1 Genbank gene 130307 130939 . - . ID=gene-D8M40_00570;Name=D8M40_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00570 RBME01000001.1 Protein Homology CDS 130307 130939 . - 0 ID=cds-RUP90409.1;Parent=gene-D8M40_00570;Dbxref=NCBI_GP:RUP90409.1;Name=RUP90409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013397788.1;locus_tag=D8M40_00570;product=lactate utilization protein C;protein_id=RUP90409.1;transl_table=11 RBME01000001.1 Genbank gene 130939 132414 . - . ID=gene-D8M40_00575;Name=D8M40_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00575 RBME01000001.1 Protein Homology CDS 130939 132414 . - 0 ID=cds-RUP90410.1;Parent=gene-D8M40_00575;Dbxref=NCBI_GP:RUP90410.1;Name=RUP90410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399599.1;locus_tag=D8M40_00575;product=iron-sulfur cluster-binding protein;protein_id=RUP90410.1;transl_table=11 RBME01000001.1 Genbank gene 132414 133217 . - . ID=gene-D8M40_00580;Name=D8M40_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00580 RBME01000001.1 Protein Homology CDS 132414 133217 . - 0 ID=cds-RUP90411.1;Parent=gene-D8M40_00580;Dbxref=NCBI_GP:RUP90411.1;Name=RUP90411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297866.1;locus_tag=D8M40_00580;product=(Fe-S)-binding protein;protein_id=RUP90411.1;transl_table=11 RBME01000001.1 Genbank gene 133466 133618 . + . ID=gene-D8M40_00585;Name=D8M40_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00585 RBME01000001.1 GeneMarkS+ CDS 133466 133618 . + 0 ID=cds-RUP90412.1;Parent=gene-D8M40_00585;Dbxref=NCBI_GP:RUP90412.1;Name=RUP90412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00585;product=zinc-binding dehydrogenase;protein_id=RUP90412.1;transl_table=11 RBME01000001.1 Genbank gene 133893 137075 . + . ID=gene-D8M40_00590;Name=D8M40_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00590 RBME01000001.1 Protein Homology CDS 133893 137075 . + 0 ID=cds-RUP90780.1;Parent=gene-D8M40_00590;Dbxref=NCBI_GP:RUP90780.1;Name=RUP90780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278452.1;locus_tag=D8M40_00590;product=isoleucine--tRNA ligase;protein_id=RUP90780.1;transl_table=11 RBME01000001.1 Genbank gene 137245 138372 . - . ID=gene-D8M40_00595;Name=D8M40_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00595 RBME01000001.1 Protein Homology CDS 137245 138372 . - 0 ID=cds-RUP90413.1;Parent=gene-D8M40_00595;Dbxref=NCBI_GP:RUP90413.1;Name=RUP90413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012795574.1;locus_tag=D8M40_00595;product=amino acid deaminase/aldolase;protein_id=RUP90413.1;transl_table=11 RBME01000001.1 Genbank gene 138449 139537 . + . ID=gene-D8M40_00600;Name=D8M40_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00600 RBME01000001.1 Protein Homology CDS 138449 139537 . + 0 ID=cds-RUP90781.1;Parent=gene-D8M40_00600;Dbxref=NCBI_GP:RUP90781.1;Name=RUP90781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014011398.1;locus_tag=D8M40_00600;product=alkene reductase;protein_id=RUP90781.1;transl_table=11 RBME01000001.1 Genbank gene 139846 140775 . + . ID=gene-D8M40_00605;Name=D8M40_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00605 RBME01000001.1 Protein Homology CDS 139846 140775 . + 0 ID=cds-RUP90414.1;Parent=gene-D8M40_00605;Dbxref=NCBI_GP:RUP90414.1;Name=RUP90414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283832.1;locus_tag=D8M40_00605;product=hypothetical protein;protein_id=RUP90414.1;transl_table=11 RBME01000001.1 Genbank gene 141061 142047 . + . ID=gene-D8M40_00610;Name=D8M40_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00610 RBME01000001.1 GeneMarkS+ CDS 141061 142047 . + 0 ID=cds-RUP90415.1;Parent=gene-D8M40_00610;Dbxref=NCBI_GP:RUP90415.1;Name=RUP90415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00610;product=hypothetical protein;protein_id=RUP90415.1;transl_table=11 RBME01000001.1 Genbank gene 142346 143314 . + . ID=gene-D8M40_00615;Name=D8M40_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00615 RBME01000001.1 GeneMarkS+ CDS 142346 143314 . + 0 ID=cds-RUP90416.1;Parent=gene-D8M40_00615;Dbxref=NCBI_GP:RUP90416.1;Name=RUP90416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00615;product=hypothetical protein;protein_id=RUP90416.1;transl_table=11 RBME01000001.1 Genbank gene 143682 144929 . + . ID=gene-D8M40_00620;Name=D8M40_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00620 RBME01000001.1 GeneMarkS+ CDS 143682 144929 . + 0 ID=cds-RUP90417.1;Parent=gene-D8M40_00620;Dbxref=NCBI_GP:RUP90417.1;Name=RUP90417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00620;product=hypothetical protein;protein_id=RUP90417.1;transl_table=11 RBME01000001.1 Genbank gene 144962 145594 . + . ID=gene-D8M40_00625;Name=D8M40_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00625 RBME01000001.1 GeneMarkS+ CDS 144962 145594 . + 0 ID=cds-RUP90418.1;Parent=gene-D8M40_00625;Dbxref=NCBI_GP:RUP90418.1;Name=RUP90418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00625;product=hypothetical protein;protein_id=RUP90418.1;transl_table=11 RBME01000001.1 Genbank pseudogene 145778 146645 . + . ID=gene-D8M40_00630;Name=D8M40_00630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_00630;pseudo=true RBME01000001.1 Protein Homology CDS 145778 146645 . + 0 ID=cds-D8M40_00630;Parent=gene-D8M40_00630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582704.1;locus_tag=D8M40_00630;product=EamA/RhaT family transporter;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 146746 147048 . + . ID=gene-D8M40_00635;Name=D8M40_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00635 RBME01000001.1 Protein Homology CDS 146746 147048 . + 0 ID=cds-RUP90419.1;Parent=gene-D8M40_00635;Dbxref=NCBI_GP:RUP90419.1;Name=RUP90419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847876.1;locus_tag=D8M40_00635;product=urease subunit gamma;protein_id=RUP90419.1;transl_table=11 RBME01000001.1 Genbank gene 147098 147409 . + . ID=gene-D8M40_00640;Name=D8M40_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00640 RBME01000001.1 Protein Homology CDS 147098 147409 . + 0 ID=cds-RUP90782.1;Parent=gene-D8M40_00640;Dbxref=NCBI_GP:RUP90782.1;Name=RUP90782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392113.1;locus_tag=D8M40_00640;product=urease subunit beta;protein_id=RUP90782.1;transl_table=11 RBME01000001.1 Genbank gene 147463 149175 . + . ID=gene-D8M40_00645;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=D8M40_00645 RBME01000001.1 Protein Homology CDS 147463 149175 . + 0 ID=cds-RUP90420.1;Parent=gene-D8M40_00645;Dbxref=NCBI_GP:RUP90420.1;Name=RUP90420.1;gbkey=CDS;gene=ureC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013912492.1;locus_tag=D8M40_00645;product=urease subunit alpha;protein_id=RUP90420.1;transl_table=11 RBME01000001.1 Genbank gene 149224 149697 . + . ID=gene-D8M40_00650;Name=D8M40_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00650 RBME01000001.1 Protein Homology CDS 149224 149697 . + 0 ID=cds-RUP90421.1;Parent=gene-D8M40_00650;Dbxref=NCBI_GP:RUP90421.1;Name=RUP90421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392117.1;locus_tag=D8M40_00650;product=urease accessory protein UreE;protein_id=RUP90421.1;transl_table=11 RBME01000001.1 Genbank gene 149678 150427 . + . ID=gene-D8M40_00655;Name=D8M40_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00655 RBME01000001.1 Protein Homology CDS 149678 150427 . + 0 ID=cds-RUP90422.1;Parent=gene-D8M40_00655;Dbxref=NCBI_GP:RUP90422.1;Name=RUP90422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396004.1;locus_tag=D8M40_00655;product=urease accessory protein UreF;protein_id=RUP90422.1;transl_table=11 RBME01000001.1 Genbank gene 150509 151123 . + . ID=gene-D8M40_00660;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=D8M40_00660 RBME01000001.1 Protein Homology CDS 150509 151123 . + 0 ID=cds-RUP90423.1;Parent=gene-D8M40_00660;Dbxref=NCBI_GP:RUP90423.1;Name=RUP90423.1;gbkey=CDS;gene=ureG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014655870.1;locus_tag=D8M40_00660;product=urease accessory protein UreG;protein_id=RUP90423.1;transl_table=11 RBME01000001.1 Genbank gene 151125 152000 . + . ID=gene-D8M40_00665;Name=D8M40_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00665 RBME01000001.1 Protein Homology CDS 151125 152000 . + 0 ID=cds-RUP90424.1;Parent=gene-D8M40_00665;Dbxref=NCBI_GP:RUP90424.1;Name=RUP90424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242775.1;locus_tag=D8M40_00665;product=urease accessory protein UreD;protein_id=RUP90424.1;transl_table=11 RBME01000001.1 Genbank gene 152038 152343 . - . ID=gene-D8M40_00670;Name=D8M40_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00670 RBME01000001.1 Protein Homology CDS 152038 152343 . - 0 ID=cds-RUP90425.1;Parent=gene-D8M40_00670;Dbxref=NCBI_GP:RUP90425.1;Name=RUP90425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016457253.1;locus_tag=D8M40_00670;product=ArsR family transcriptional regulator;protein_id=RUP90425.1;transl_table=11 RBME01000001.1 Genbank gene 152533 153579 . + . ID=gene-D8M40_00675;Name=D8M40_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00675 RBME01000001.1 Protein Homology CDS 152533 153579 . + 0 ID=cds-RUP90783.1;Parent=gene-D8M40_00675;Dbxref=NCBI_GP:RUP90783.1;Name=RUP90783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340884.1;locus_tag=D8M40_00675;product=iron ABC transporter permease;protein_id=RUP90783.1;transl_table=11 RBME01000001.1 Genbank gene 153576 154292 . + . ID=gene-D8M40_00680;Name=D8M40_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00680 RBME01000001.1 Protein Homology CDS 153576 154292 . + 0 ID=cds-RUP90426.1;Parent=gene-D8M40_00680;Dbxref=NCBI_GP:RUP90426.1;Name=RUP90426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840019.1;locus_tag=D8M40_00680;product=ABC transporter ATP-binding protein;protein_id=RUP90426.1;transl_table=11 RBME01000001.1 Genbank gene 154289 155233 . + . ID=gene-D8M40_00685;Name=D8M40_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00685 RBME01000001.1 Protein Homology CDS 154289 155233 . + 0 ID=cds-RUP90427.1;Parent=gene-D8M40_00685;Dbxref=NCBI_GP:RUP90427.1;Name=RUP90427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298107.1;locus_tag=D8M40_00685;product=ABC transporter substrate-binding protein;protein_id=RUP90427.1;transl_table=11 RBME01000001.1 Genbank gene 155241 156152 . - . ID=gene-D8M40_00690;Name=D8M40_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00690 RBME01000001.1 Protein Homology CDS 155241 156152 . - 0 ID=cds-RUP90784.1;Parent=gene-D8M40_00690;Dbxref=NCBI_GP:RUP90784.1;Name=RUP90784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120529.1;locus_tag=D8M40_00690;product=HtaA protein;protein_id=RUP90784.1;transl_table=11 RBME01000001.1 Genbank gene 156547 156867 . + . ID=gene-D8M40_00695;Name=D8M40_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00695 RBME01000001.1 Protein Homology CDS 156547 156867 . + 0 ID=cds-RUP90428.1;Parent=gene-D8M40_00695;Dbxref=NCBI_GP:RUP90428.1;Name=RUP90428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120533.1;locus_tag=D8M40_00695;product=hypothetical protein;protein_id=RUP90428.1;transl_table=11 RBME01000001.1 Genbank gene 157489 157809 . - . ID=gene-D8M40_00700;Name=D8M40_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00700 RBME01000001.1 Protein Homology CDS 157489 157809 . - 0 ID=cds-RUP90429.1;Parent=gene-D8M40_00700;Dbxref=NCBI_GP:RUP90429.1;Name=RUP90429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120533.1;locus_tag=D8M40_00700;product=hypothetical protein;protein_id=RUP90429.1;transl_table=11 RBME01000001.1 Genbank gene 157855 158178 . - . ID=gene-D8M40_00705;Name=D8M40_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00705 RBME01000001.1 Protein Homology CDS 157855 158178 . - 0 ID=cds-RUP90430.1;Parent=gene-D8M40_00705;Dbxref=NCBI_GP:RUP90430.1;Name=RUP90430.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14436.4;locus_tag=D8M40_00705;product=hypothetical protein;protein_id=RUP90430.1;transl_table=11 RBME01000001.1 Genbank gene 158272 158784 . + . ID=gene-D8M40_00710;Name=D8M40_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00710 RBME01000001.1 GeneMarkS+ CDS 158272 158784 . + 0 ID=cds-RUP90431.1;Parent=gene-D8M40_00710;Dbxref=NCBI_GP:RUP90431.1;Name=RUP90431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00710;product=hypothetical protein;protein_id=RUP90431.1;transl_table=11 RBME01000001.1 Genbank gene 159180 159389 . + . ID=gene-D8M40_00715;Name=D8M40_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00715 RBME01000001.1 Protein Homology CDS 159180 159389 . + 0 ID=cds-RUP90432.1;Parent=gene-D8M40_00715;Dbxref=NCBI_GP:RUP90432.1;Name=RUP90432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120535.1;locus_tag=D8M40_00715;product=recombinase XerD;protein_id=RUP90432.1;transl_table=11 RBME01000001.1 Genbank gene 159789 160007 . + . ID=gene-D8M40_00720;Name=D8M40_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00720 RBME01000001.1 GeneMarkS+ CDS 159789 160007 . + 0 ID=cds-RUP90433.1;Parent=gene-D8M40_00720;Dbxref=NCBI_GP:RUP90433.1;Name=RUP90433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00720;product=hypothetical protein;protein_id=RUP90433.1;transl_table=11 RBME01000001.1 Genbank gene 160013 160198 . - . ID=gene-D8M40_00725;Name=D8M40_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00725 RBME01000001.1 GeneMarkS+ CDS 160013 160198 . - 0 ID=cds-RUP90434.1;Parent=gene-D8M40_00725;Dbxref=NCBI_GP:RUP90434.1;Name=RUP90434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00725;product=hypothetical protein;protein_id=RUP90434.1;transl_table=11 RBME01000001.1 Genbank direct_repeat 160353 164102 . + . ID=id-RBME01000001.1:160353..164102;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=160353..160381;rpt_unit_seq=ggaattacctccgcatgcgcggagaagag RBME01000001.1 Genbank gene 164124 164435 . - . ID=gene-D8M40_00730;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=D8M40_00730 RBME01000001.1 Protein Homology CDS 164124 164435 . - 0 ID=cds-RUP90435.1;Parent=gene-D8M40_00730;Dbxref=NCBI_GP:RUP90435.1;Name=RUP90435.1;gbkey=CDS;gene=cas2e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119875.1;locus_tag=D8M40_00730;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=RUP90435.1;transl_table=11 RBME01000001.1 Genbank gene 164436 165371 . - . ID=gene-D8M40_00735;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=D8M40_00735 RBME01000001.1 Protein Homology CDS 164436 165371 . - 0 ID=cds-RUP90436.1;Parent=gene-D8M40_00735;Dbxref=NCBI_GP:RUP90436.1;Name=RUP90436.1;gbkey=CDS;gene=cas1e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119874.1;locus_tag=D8M40_00735;product=type I-E CRISPR-associated endonuclease Cas1;protein_id=RUP90436.1;transl_table=11 RBME01000001.1 Genbank gene 165373 168030 . - . ID=gene-D8M40_00740;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=D8M40_00740 RBME01000001.1 Protein Homology CDS 165373 168030 . - 0 ID=cds-RUP90437.1;Parent=gene-D8M40_00740;Dbxref=NCBI_GP:RUP90437.1;Name=RUP90437.1;gbkey=CDS;gene=cas3;inference=COORDINATES: protein motif:HMM:TIGR01587%2CHMM:TIGR01596;locus_tag=D8M40_00740;product=CRISPR-associated helicase Cas3';protein_id=RUP90437.1;transl_table=11 RBME01000001.1 Genbank gene 168027 168713 . - . ID=gene-D8M40_00745;Name=D8M40_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00745 RBME01000001.1 Protein Homology CDS 168027 168713 . - 0 ID=cds-RUP90438.1;Parent=gene-D8M40_00745;Dbxref=NCBI_GP:RUP90438.1;Name=RUP90438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08798.9;locus_tag=D8M40_00745;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=RUP90438.1;transl_table=11 RBME01000001.1 Genbank gene 168970 170586 . + . ID=gene-D8M40_00750;Name=D8M40_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00750 RBME01000001.1 Protein Homology CDS 168970 170586 . + 0 ID=cds-RUP90439.1;Parent=gene-D8M40_00750;Dbxref=NCBI_GP:RUP90439.1;Name=RUP90439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09481.8;locus_tag=D8M40_00750;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=RUP90439.1;transl_table=11 RBME01000001.1 Genbank gene 170538 171227 . + . ID=gene-D8M40_00755;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=D8M40_00755 RBME01000001.1 Protein Homology CDS 170538 171227 . + 0 ID=cds-RUP90440.1;Parent=gene-D8M40_00755;Dbxref=NCBI_GP:RUP90440.1;Name=RUP90440.1;gbkey=CDS;gene=casB;inference=COORDINATES: protein motif:HMM:TIGR02548;locus_tag=D8M40_00755;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=RUP90440.1;transl_table=11 RBME01000001.1 Genbank gene 171248 172333 . + . ID=gene-D8M40_00760;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=D8M40_00760 RBME01000001.1 Protein Homology CDS 171248 172333 . + 0 ID=cds-RUP90441.1;Parent=gene-D8M40_00760;Dbxref=NCBI_GP:RUP90441.1;Name=RUP90441.1;gbkey=CDS;gene=cas7e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119869.1;locus_tag=D8M40_00760;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=RUP90441.1;transl_table=11 RBME01000001.1 Genbank gene 172326 173039 . + . ID=gene-D8M40_00765;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=D8M40_00765 RBME01000001.1 Protein Homology CDS 172326 173039 . + 0 ID=cds-RUP90442.1;Parent=gene-D8M40_00765;Dbxref=NCBI_GP:RUP90442.1;Name=RUP90442.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119868.1;locus_tag=D8M40_00765;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=RUP90442.1;transl_table=11 RBME01000001.1 Genbank gene 173060 174496 . + . ID=gene-D8M40_00770;Name=D8M40_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00770 RBME01000001.1 Protein Homology CDS 173060 174496 . + 0 ID=cds-RUP90443.1;Parent=gene-D8M40_00770;Dbxref=NCBI_GP:RUP90443.1;Name=RUP90443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119867.1;locus_tag=D8M40_00770;product=DNA polymerase IV;protein_id=RUP90443.1;transl_table=11 RBME01000001.1 Genbank gene 174476 175501 . - . ID=gene-D8M40_00775;Name=D8M40_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00775 RBME01000001.1 Protein Homology CDS 174476 175501 . - 0 ID=cds-RUP90444.1;Parent=gene-D8M40_00775;Dbxref=NCBI_GP:RUP90444.1;Name=RUP90444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821622.1;locus_tag=D8M40_00775;product=asparaginase;protein_id=RUP90444.1;transl_table=11 RBME01000001.1 Genbank gene 175641 176267 . + . ID=gene-D8M40_00780;Name=D8M40_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00780 RBME01000001.1 GeneMarkS+ CDS 175641 176267 . + 0 ID=cds-RUP90445.1;Parent=gene-D8M40_00780;Dbxref=NCBI_GP:RUP90445.1;Name=RUP90445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00780;product=hypothetical protein;protein_id=RUP90445.1;transl_table=11 RBME01000001.1 Genbank gene 176501 178174 . - . ID=gene-D8M40_00785;Name=D8M40_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00785 RBME01000001.1 Protein Homology CDS 176501 178174 . - 0 ID=cds-RUP90446.1;Parent=gene-D8M40_00785;Dbxref=NCBI_GP:RUP90446.1;Name=RUP90446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119864.1;locus_tag=D8M40_00785;product=L-lactate permease;protein_id=RUP90446.1;transl_table=11 RBME01000001.1 Genbank gene 178901 180562 . + . ID=gene-D8M40_00790;Name=D8M40_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00790 RBME01000001.1 Protein Homology CDS 178901 180562 . + 0 ID=cds-RUP90447.1;Parent=gene-D8M40_00790;Dbxref=NCBI_GP:RUP90447.1;Name=RUP90447.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01844.21;locus_tag=D8M40_00790;product=HNH endonuclease;protein_id=RUP90447.1;transl_table=11 RBME01000001.1 Genbank gene 180591 181394 . - . ID=gene-D8M40_00795;Name=D8M40_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00795 RBME01000001.1 GeneMarkS+ CDS 180591 181394 . - 0 ID=cds-RUP90448.1;Parent=gene-D8M40_00795;Dbxref=NCBI_GP:RUP90448.1;Name=RUP90448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00795;product=hypothetical protein;protein_id=RUP90448.1;transl_table=11 RBME01000001.1 Genbank gene 181426 182307 . + . ID=gene-D8M40_00800;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=D8M40_00800 RBME01000001.1 Protein Homology CDS 181426 182307 . + 0 ID=cds-RUP90449.1;Parent=gene-D8M40_00800;Dbxref=NCBI_GP:RUP90449.1;Name=RUP90449.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117497.1;locus_tag=D8M40_00800;product=signal peptidase II;protein_id=RUP90449.1;transl_table=11 RBME01000001.1 Genbank gene 182297 183232 . + . ID=gene-D8M40_00805;Name=D8M40_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00805 RBME01000001.1 Protein Homology CDS 182297 183232 . + 0 ID=cds-RUP90450.1;Parent=gene-D8M40_00805;Dbxref=NCBI_GP:RUP90450.1;Name=RUP90450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601339.1;locus_tag=D8M40_00805;product=RluA family pseudouridine synthase;protein_id=RUP90450.1;transl_table=11 RBME01000001.1 Genbank gene 183261 183857 . + . ID=gene-D8M40_00810;Name=D8M40_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00810 RBME01000001.1 GeneMarkS+ CDS 183261 183857 . + 0 ID=cds-RUP90451.1;Parent=gene-D8M40_00810;Dbxref=NCBI_GP:RUP90451.1;Name=RUP90451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00810;product=hypothetical protein;protein_id=RUP90451.1;transl_table=11 RBME01000001.1 Genbank gene 183869 184060 . + . ID=gene-D8M40_00815;Name=D8M40_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00815 RBME01000001.1 GeneMarkS+ CDS 183869 184060 . + 0 ID=cds-RUP90452.1;Parent=gene-D8M40_00815;Dbxref=NCBI_GP:RUP90452.1;Name=RUP90452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00815;product=hypothetical protein;protein_id=RUP90452.1;transl_table=11 RBME01000001.1 Genbank gene 184084 187662 . + . ID=gene-D8M40_00820;Name=D8M40_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00820 RBME01000001.1 Protein Homology CDS 184084 187662 . + 0 ID=cds-RUP90453.1;Parent=gene-D8M40_00820;Dbxref=NCBI_GP:RUP90453.1;Name=RUP90453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119857.1;locus_tag=D8M40_00820;product=DNA polymerase III subunit alpha;protein_id=RUP90453.1;transl_table=11 RBME01000001.1 Genbank gene 187688 188989 . + . ID=gene-D8M40_00825;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=D8M40_00825 RBME01000001.1 Protein Homology CDS 187688 188989 . + 0 ID=cds-RUP90454.1;Parent=gene-D8M40_00825;Dbxref=NCBI_GP:RUP90454.1;Name=RUP90454.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580583.1;locus_tag=D8M40_00825;product=threonine dehydratase;protein_id=RUP90454.1;transl_table=11 RBME01000001.1 Genbank gene 188989 189645 . + . ID=gene-D8M40_00830;Name=D8M40_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00830 RBME01000001.1 Protein Homology CDS 188989 189645 . + 0 ID=cds-RUP90455.1;Parent=gene-D8M40_00830;Dbxref=NCBI_GP:RUP90455.1;Name=RUP90455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190496.1;locus_tag=D8M40_00830;product=YigZ family protein;protein_id=RUP90455.1;transl_table=11 RBME01000001.1 Genbank gene 189652 189888 . + . ID=gene-D8M40_00835;Name=D8M40_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00835 RBME01000001.1 Protein Homology CDS 189652 189888 . + 0 ID=cds-RUP90456.1;Parent=gene-D8M40_00835;Dbxref=NCBI_GP:RUP90456.1;Name=RUP90456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601325.1;locus_tag=D8M40_00835;product=hypothetical protein;protein_id=RUP90456.1;transl_table=11 RBME01000001.1 Genbank gene 189929 190327 . + . ID=gene-D8M40_00840;Name=D8M40_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00840 RBME01000001.1 Protein Homology CDS 189929 190327 . + 0 ID=cds-RUP90457.1;Parent=gene-D8M40_00840;Dbxref=NCBI_GP:RUP90457.1;Name=RUP90457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528770.1;locus_tag=D8M40_00840;product=RNA-binding S4 domain-containing protein;protein_id=RUP90457.1;transl_table=11 RBME01000001.1 Genbank gene 190375 190830 . - . ID=gene-D8M40_00845;Name=D8M40_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00845 RBME01000001.1 GeneMarkS+ CDS 190375 190830 . - 0 ID=cds-RUP90458.1;Parent=gene-D8M40_00845;Dbxref=NCBI_GP:RUP90458.1;Name=RUP90458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00845;product=hypothetical protein;protein_id=RUP90458.1;transl_table=11 RBME01000001.1 Genbank gene 191157 194078 . - . ID=gene-D8M40_00850;Name=D8M40_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00850 RBME01000001.1 Protein Homology CDS 191157 194078 . - 0 ID=cds-RUP90459.1;Parent=gene-D8M40_00850;Dbxref=NCBI_GP:RUP90459.1;Name=RUP90459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186578.1;locus_tag=D8M40_00850;product=FAD-binding oxidoreductase;protein_id=RUP90459.1;transl_table=11 RBME01000001.1 Genbank gene 194310 197573 . + . ID=gene-D8M40_00855;Name=D8M40_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00855 RBME01000001.1 Protein Homology CDS 194310 197573 . + 0 ID=cds-RUP90460.1;Parent=gene-D8M40_00855;Dbxref=NCBI_GP:RUP90460.1;Name=RUP90460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167;locus_tag=D8M40_00855;product=LPXTG cell wall anchor domain-containing protein;protein_id=RUP90460.1;transl_table=11 RBME01000001.1 Genbank gene 197581 198354 . - . ID=gene-D8M40_00860;Name=D8M40_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00860 RBME01000001.1 Protein Homology CDS 197581 198354 . - 0 ID=cds-RUP90461.1;Parent=gene-D8M40_00860;Dbxref=NCBI_GP:RUP90461.1;Name=RUP90461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119849.1;locus_tag=D8M40_00860;product=glucosamine-6-phosphate deaminase;protein_id=RUP90461.1;transl_table=11 RBME01000001.1 Genbank gene 198426 199610 . - . ID=gene-D8M40_00865;Name=D8M40_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00865 RBME01000001.1 Protein Homology CDS 198426 199610 . - 0 ID=cds-RUP90462.1;Parent=gene-D8M40_00865;Dbxref=NCBI_GP:RUP90462.1;Name=RUP90462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119848.1;locus_tag=D8M40_00865;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=RUP90462.1;transl_table=11 RBME01000001.1 Genbank gene 199765 200706 . + . ID=gene-D8M40_00870;Name=D8M40_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00870 RBME01000001.1 Protein Homology CDS 199765 200706 . + 0 ID=cds-RUP90463.1;Parent=gene-D8M40_00870;Dbxref=NCBI_GP:RUP90463.1;Name=RUP90463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063667.1;locus_tag=D8M40_00870;product=dihydrodipicolinate synthase family protein;protein_id=RUP90463.1;transl_table=11 RBME01000001.1 Genbank gene 200684 201679 . + . ID=gene-D8M40_00875;Name=D8M40_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00875 RBME01000001.1 Protein Homology CDS 200684 201679 . + 0 ID=cds-RUP90464.1;Parent=gene-D8M40_00875;Dbxref=NCBI_GP:RUP90464.1;Name=RUP90464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00480.18;locus_tag=D8M40_00875;product=ROK family protein;protein_id=RUP90464.1;transl_table=11 RBME01000001.1 Genbank gene 201770 202492 . + . ID=gene-D8M40_00880;Name=D8M40_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00880 RBME01000001.1 Protein Homology CDS 201770 202492 . + 0 ID=cds-RUP90465.1;Parent=gene-D8M40_00880;Dbxref=NCBI_GP:RUP90465.1;Name=RUP90465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279774.1;locus_tag=D8M40_00880;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=RUP90465.1;transl_table=11 RBME01000001.1 Genbank gene 202505 203206 . - . ID=gene-D8M40_00885;Name=D8M40_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00885 RBME01000001.1 Protein Homology CDS 202505 203206 . - 0 ID=cds-RUP90466.1;Parent=gene-D8M40_00885;Dbxref=NCBI_GP:RUP90466.1;Name=RUP90466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00392.19%2CHMM:PF07729.10;locus_tag=D8M40_00885;product=FadR family transcriptional regulator;protein_id=RUP90466.1;transl_table=11 RBME01000001.1 Genbank gene 203495 205132 . + . ID=gene-D8M40_00890;Name=D8M40_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00890 RBME01000001.1 Protein Homology CDS 203495 205132 . + 0 ID=cds-RUP90467.1;Parent=gene-D8M40_00890;Dbxref=NCBI_GP:RUP90467.1;Name=RUP90467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011265985.1;locus_tag=D8M40_00890;product=ABC transporter substrate-binding protein;protein_id=RUP90467.1;transl_table=11 RBME01000001.1 Genbank gene 205197 206162 . + . ID=gene-D8M40_00895;Name=D8M40_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00895 RBME01000001.1 Protein Homology CDS 205197 206162 . + 0 ID=cds-RUP90468.1;Parent=gene-D8M40_00895;Dbxref=NCBI_GP:RUP90468.1;Name=RUP90468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003154280.1;locus_tag=D8M40_00895;product=ABC transporter permease;protein_id=RUP90468.1;transl_table=11 RBME01000001.1 Genbank gene 206162 208252 . + . ID=gene-D8M40_00900;Name=D8M40_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00900 RBME01000001.1 Protein Homology CDS 206162 208252 . + 0 ID=cds-RUP90469.1;Parent=gene-D8M40_00900;Dbxref=NCBI_GP:RUP90469.1;Name=RUP90469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119841.1;locus_tag=D8M40_00900;product=ATP-binding cassette domain-containing protein;protein_id=RUP90469.1;transl_table=11 RBME01000001.1 Genbank gene 208258 209106 . + . ID=gene-D8M40_00905;Name=D8M40_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00905 RBME01000001.1 Protein Homology CDS 208258 209106 . + 0 ID=cds-RUP90470.1;Parent=gene-D8M40_00905;Dbxref=NCBI_GP:RUP90470.1;Name=RUP90470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652090.1;locus_tag=D8M40_00905;product=ABC transporter ATP-binding protein;protein_id=RUP90470.1;transl_table=11 RBME01000001.1 Genbank gene 209205 209894 . + . ID=gene-D8M40_00910;Name=D8M40_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00910 RBME01000001.1 Protein Homology CDS 209205 209894 . + 0 ID=cds-RUP90471.1;Parent=gene-D8M40_00910;Dbxref=NCBI_GP:RUP90471.1;Name=RUP90471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120244.1;locus_tag=D8M40_00910;product=S1 family peptidase;protein_id=RUP90471.1;transl_table=11 RBME01000001.1 Genbank gene 209931 211688 . - . ID=gene-D8M40_00915;Name=D8M40_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00915 RBME01000001.1 Protein Homology CDS 209931 211688 . - 0 ID=cds-RUP90472.1;Parent=gene-D8M40_00915;Dbxref=NCBI_GP:RUP90472.1;Name=RUP90472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119834.1;locus_tag=D8M40_00915;product=BCCT family transporter;protein_id=RUP90472.1;transl_table=11 RBME01000001.1 Genbank gene 211789 213174 . - . ID=gene-D8M40_00920;Name=D8M40_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00920 RBME01000001.1 GeneMarkS+ CDS 211789 213174 . - 0 ID=cds-RUP90473.1;Parent=gene-D8M40_00920;Dbxref=NCBI_GP:RUP90473.1;Name=RUP90473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00920;product=DNA polymerase III subunit epsilon;protein_id=RUP90473.1;transl_table=11 RBME01000001.1 Genbank gene 213178 213873 . - . ID=gene-D8M40_00925;Name=D8M40_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00925 RBME01000001.1 Protein Homology CDS 213178 213873 . - 0 ID=cds-RUP90474.1;Parent=gene-D8M40_00925;Dbxref=NCBI_GP:RUP90474.1;Name=RUP90474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M40_00925;product=TetR family transcriptional regulator;protein_id=RUP90474.1;transl_table=11 RBME01000001.1 Genbank gene 214089 214805 . + . ID=gene-D8M40_00930;Name=D8M40_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00930 RBME01000001.1 GeneMarkS+ CDS 214089 214805 . + 0 ID=cds-RUP90475.1;Parent=gene-D8M40_00930;Dbxref=NCBI_GP:RUP90475.1;Name=RUP90475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00930;product=hypothetical protein;protein_id=RUP90475.1;transl_table=11 RBME01000001.1 Genbank gene 214809 215399 . + . ID=gene-D8M40_00935;Name=D8M40_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00935 RBME01000001.1 GeneMarkS+ CDS 214809 215399 . + 0 ID=cds-RUP90476.1;Parent=gene-D8M40_00935;Dbxref=NCBI_GP:RUP90476.1;Name=RUP90476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_00935;product=hypothetical protein;protein_id=RUP90476.1;transl_table=11 RBME01000001.1 Genbank gene 215412 216821 . + . ID=gene-D8M40_00940;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=D8M40_00940 RBME01000001.1 Protein Homology CDS 215412 216821 . + 0 ID=cds-RUP90477.1;Parent=gene-D8M40_00940;Dbxref=NCBI_GP:RUP90477.1;Name=RUP90477.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119829.1;locus_tag=D8M40_00940;product=histidinol dehydrogenase;protein_id=RUP90477.1;transl_table=11 RBME01000001.1 Genbank gene 216825 217919 . + . ID=gene-D8M40_00945;Name=D8M40_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00945 RBME01000001.1 Protein Homology CDS 216825 217919 . + 0 ID=cds-RUP90478.1;Parent=gene-D8M40_00945;Dbxref=NCBI_GP:RUP90478.1;Name=RUP90478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119828.1;locus_tag=D8M40_00945;product=histidinol-phosphate transaminase;protein_id=RUP90478.1;transl_table=11 RBME01000001.1 Genbank gene 217916 218521 . + . ID=gene-D8M40_00950;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=D8M40_00950 RBME01000001.1 Protein Homology CDS 217916 218521 . + 0 ID=cds-RUP90479.1;Parent=gene-D8M40_00950;Dbxref=NCBI_GP:RUP90479.1;Name=RUP90479.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119827.1;locus_tag=D8M40_00950;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=RUP90479.1;transl_table=11 RBME01000001.1 Genbank gene 218930 220189 . + . ID=gene-D8M40_00955;Name=D8M40_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00955 RBME01000001.1 Protein Homology CDS 218930 220189 . + 0 ID=cds-RUP90785.1;Parent=gene-D8M40_00955;Dbxref=NCBI_GP:RUP90785.1;Name=RUP90785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651634.1;locus_tag=D8M40_00955;product=MFS transporter;protein_id=RUP90785.1;transl_table=11 RBME01000001.1 Genbank gene 220205 220837 . + . ID=gene-D8M40_00960;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=D8M40_00960 RBME01000001.1 Protein Homology CDS 220205 220837 . + 0 ID=cds-RUP90480.1;Parent=gene-D8M40_00960;Dbxref=NCBI_GP:RUP90480.1;Name=RUP90480.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119824.1;locus_tag=D8M40_00960;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=RUP90480.1;transl_table=11 RBME01000001.1 Genbank gene 220878 221639 . + . ID=gene-D8M40_00965;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=D8M40_00965 RBME01000001.1 Protein Homology CDS 220878 221639 . + 0 ID=cds-RUP90481.1;Parent=gene-D8M40_00965;Dbxref=NCBI_GP:RUP90481.1;Name=RUP90481.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119823.1;locus_tag=D8M40_00965;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=RUP90481.1;transl_table=11 RBME01000001.1 Genbank gene 221652 222473 . + . ID=gene-D8M40_00970;Name=D8M40_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00970 RBME01000001.1 Protein Homology CDS 221652 222473 . + 0 ID=cds-RUP90482.1;Parent=gene-D8M40_00970;Dbxref=NCBI_GP:RUP90482.1;Name=RUP90482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00459.23;locus_tag=D8M40_00970;product=inositol monophosphatase family protein;protein_id=RUP90482.1;transl_table=11 RBME01000001.1 Genbank gene 222491 223312 . + . ID=gene-D8M40_00975;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=D8M40_00975 RBME01000001.1 Protein Homology CDS 222491 223312 . + 0 ID=cds-RUP90483.1;Parent=gene-D8M40_00975;Dbxref=NCBI_GP:RUP90483.1;Name=RUP90483.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011273397.1;locus_tag=D8M40_00975;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=RUP90483.1;transl_table=11 RBME01000001.1 Genbank gene 223309 223704 . + . ID=gene-D8M40_00980;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=D8M40_00980 RBME01000001.1 Protein Homology CDS 223309 223704 . + 0 ID=cds-RUP90484.1;Parent=gene-D8M40_00980;Dbxref=NCBI_GP:RUP90484.1;Name=RUP90484.1;gbkey=CDS;gene=hisI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119820.1;locus_tag=D8M40_00980;product=phosphoribosyl-AMP cyclohydrolase;protein_id=RUP90484.1;transl_table=11 RBME01000001.1 Genbank gene 223706 224368 . + . ID=gene-D8M40_00985;Name=D8M40_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00985 RBME01000001.1 Protein Homology CDS 223706 224368 . + 0 ID=cds-RUP90485.1;Parent=gene-D8M40_00985;Dbxref=NCBI_GP:RUP90485.1;Name=RUP90485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119819.1;locus_tag=D8M40_00985;product=TIGR02234 family membrane protein;protein_id=RUP90485.1;transl_table=11 RBME01000001.1 Genbank gene 224458 225345 . + . ID=gene-D8M40_00990;Name=D8M40_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00990 RBME01000001.1 Protein Homology CDS 224458 225345 . + 0 ID=cds-RUP90486.1;Parent=gene-D8M40_00990;Dbxref=NCBI_GP:RUP90486.1;Name=RUP90486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119818.1;locus_tag=D8M40_00990;product=indole-3-glycerol-phosphate synthase TrpC;protein_id=RUP90486.1;transl_table=11 RBME01000001.1 Genbank gene 225368 226276 . + . ID=gene-D8M40_00995;Name=D8M40_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_00995 RBME01000001.1 Protein Homology CDS 225368 226276 . + 0 ID=cds-RUP90487.1;Parent=gene-D8M40_00995;Dbxref=NCBI_GP:RUP90487.1;Name=RUP90487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016459293.1;locus_tag=D8M40_00995;product=prolipoprotein diacylglyceryl transferase;protein_id=RUP90487.1;transl_table=11 RBME01000001.1 Genbank gene 226311 227741 . + . ID=gene-D8M40_01000;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=D8M40_01000 RBME01000001.1 Protein Homology CDS 226311 227741 . + 0 ID=cds-RUP90488.1;Parent=gene-D8M40_01000;Dbxref=NCBI_GP:RUP90488.1;Name=RUP90488.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005289647.1;locus_tag=D8M40_01000;product=pyruvate kinase;protein_id=RUP90488.1;transl_table=11 RBME01000001.1 Genbank gene 227796 229052 . - . ID=gene-D8M40_01005;Name=D8M40_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01005 RBME01000001.1 Protein Homology CDS 227796 229052 . - 0 ID=cds-RUP90489.1;Parent=gene-D8M40_01005;Dbxref=NCBI_GP:RUP90489.1;Name=RUP90489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119815.1;locus_tag=D8M40_01005;product=amidohydrolase;protein_id=RUP90489.1;transl_table=11 RBME01000001.1 Genbank gene 229345 231474 . + . ID=gene-D8M40_01010;Name=D8M40_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01010 RBME01000001.1 Protein Homology CDS 229345 231474 . + 0 ID=cds-RUP90490.1;Parent=gene-D8M40_01010;Dbxref=NCBI_GP:RUP90490.1;Name=RUP90490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01468.15;locus_tag=D8M40_01010;product=hypothetical protein;protein_id=RUP90490.1;transl_table=11 RBME01000001.1 Genbank gene 231926 234472 . + . ID=gene-D8M40_01015;Name=D8M40_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01015 RBME01000001.1 GeneMarkS+ CDS 231926 234472 . + 0 ID=cds-RUP90491.1;Parent=gene-D8M40_01015;Dbxref=NCBI_GP:RUP90491.1;Name=RUP90491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01015;product=hypothetical protein;protein_id=RUP90491.1;transl_table=11 RBME01000001.1 Genbank gene 234761 236050 . + . ID=gene-D8M40_01020;Name=D8M40_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01020 RBME01000001.1 Protein Homology CDS 234761 236050 . + 0 ID=cds-RUP90492.1;Parent=gene-D8M40_01020;Dbxref=NCBI_GP:RUP90492.1;Name=RUP90492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01468.15;locus_tag=D8M40_01020;product=hypothetical protein;protein_id=RUP90492.1;transl_table=11 RBME01000001.1 Genbank gene 236291 236689 . + . ID=gene-D8M40_01025;Name=D8M40_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01025 RBME01000001.1 Protein Homology CDS 236291 236689 . + 0 ID=cds-RUP90493.1;Parent=gene-D8M40_01025;Dbxref=NCBI_GP:RUP90493.1;Name=RUP90493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119812.1;locus_tag=D8M40_01025;product=hypothetical protein;protein_id=RUP90493.1;transl_table=11 RBME01000001.1 Genbank gene 236686 237810 . - . ID=gene-D8M40_01030;Name=D8M40_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01030 RBME01000001.1 Protein Homology CDS 236686 237810 . - 0 ID=cds-RUP90494.1;Parent=gene-D8M40_01030;Dbxref=NCBI_GP:RUP90494.1;Name=RUP90494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119811.1;locus_tag=D8M40_01030;product=glycerate kinase;protein_id=RUP90494.1;transl_table=11 RBME01000001.1 Genbank gene 238083 239426 . + . ID=gene-D8M40_01035;Name=D8M40_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01035 RBME01000001.1 Protein Homology CDS 238083 239426 . + 0 ID=cds-RUP90495.1;Parent=gene-D8M40_01035;Dbxref=NCBI_GP:RUP90495.1;Name=RUP90495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190454.1;locus_tag=D8M40_01035;product=NADP-specific glutamate dehydrogenase;protein_id=RUP90495.1;transl_table=11 RBME01000001.1 Genbank gene 239550 240266 . + . ID=gene-D8M40_01040;Name=D8M40_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01040 RBME01000001.1 Protein Homology CDS 239550 240266 . + 0 ID=cds-RUP90496.1;Parent=gene-D8M40_01040;Dbxref=NCBI_GP:RUP90496.1;Name=RUP90496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119809.1;locus_tag=D8M40_01040;product=DivIVA domain-containing protein;protein_id=RUP90496.1;transl_table=11 RBME01000001.1 Genbank gene 240297 240842 . + . ID=gene-D8M40_01045;Name=D8M40_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01045 RBME01000001.1 Protein Homology CDS 240297 240842 . + 0 ID=cds-RUP90497.1;Parent=gene-D8M40_01045;Dbxref=NCBI_GP:RUP90497.1;Name=RUP90497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119808.1;locus_tag=D8M40_01045;product=DUF177 domain-containing protein;protein_id=RUP90497.1;transl_table=11 RBME01000001.1 Genbank gene 240787 241596 . + . ID=gene-D8M40_01050;Name=D8M40_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01050 RBME01000001.1 Protein Homology CDS 240787 241596 . + 0 ID=cds-RUP90498.1;Parent=gene-D8M40_01050;Dbxref=NCBI_GP:RUP90498.1;Name=RUP90498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856375.1;locus_tag=D8M40_01050;product=ribonuclease III;protein_id=RUP90498.1;transl_table=11 RBME01000001.1 Genbank gene 241600 242472 . + . ID=gene-D8M40_01055;Name=D8M40_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01055 RBME01000001.1 Protein Homology CDS 241600 242472 . + 0 ID=cds-RUP90499.1;Parent=gene-D8M40_01055;Dbxref=NCBI_GP:RUP90499.1;Name=RUP90499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600090.1;locus_tag=D8M40_01055;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=RUP90499.1;transl_table=11 RBME01000001.1 Genbank gene 242491 243972 . + . ID=gene-D8M40_01060;Name=D8M40_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01060 RBME01000001.1 Protein Homology CDS 242491 243972 . + 0 ID=cds-RUP90500.1;Parent=gene-D8M40_01060;Dbxref=NCBI_GP:RUP90500.1;Name=RUP90500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119805.1;locus_tag=D8M40_01060;product=alanine:cation symporter family protein;protein_id=RUP90500.1;transl_table=11 RBME01000001.1 Genbank gene 244002 247478 . + . ID=gene-D8M40_01065;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=D8M40_01065 RBME01000001.1 Protein Homology CDS 244002 247478 . + 0 ID=cds-RUP90501.1;Parent=gene-D8M40_01065;Dbxref=NCBI_GP:RUP90501.1;Name=RUP90501.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119804.1;locus_tag=D8M40_01065;product=chromosome segregation protein SMC;protein_id=RUP90501.1;transl_table=11 RBME01000001.1 Genbank gene 247529 248380 . + . ID=gene-D8M40_01070;Name=D8M40_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01070 RBME01000001.1 Protein Homology CDS 247529 248380 . + 0 ID=cds-RUP90502.1;Parent=gene-D8M40_01070;Dbxref=NCBI_GP:RUP90502.1;Name=RUP90502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119803.1;locus_tag=D8M40_01070;product=glycine betaine ABC transporter substrate-binding protein;protein_id=RUP90502.1;transl_table=11 RBME01000001.1 Genbank gene 248539 249915 . + . ID=gene-D8M40_01075;Name=D8M40_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01075 RBME01000001.1 Protein Homology CDS 248539 249915 . + 0 ID=cds-RUP90503.1;Parent=gene-D8M40_01075;Dbxref=NCBI_GP:RUP90503.1;Name=RUP90503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01844.21;locus_tag=D8M40_01075;product=HNH endonuclease;protein_id=RUP90503.1;transl_table=11 RBME01000001.1 Genbank gene 249878 251572 . + . ID=gene-D8M40_01080;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=D8M40_01080 RBME01000001.1 Protein Homology CDS 249878 251572 . + 0 ID=cds-RUP90504.1;Parent=gene-D8M40_01080;Dbxref=NCBI_GP:RUP90504.1;Name=RUP90504.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119801.1;locus_tag=D8M40_01080;product=signal recognition particle-docking protein FtsY;protein_id=RUP90504.1;transl_table=11 RBME01000001.1 Genbank gene 251597 254410 . + . ID=gene-D8M40_01085;Name=D8M40_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01085 RBME01000001.1 Protein Homology CDS 251597 254410 . + 0 ID=cds-RUP90505.1;Parent=gene-D8M40_01085;Dbxref=NCBI_GP:RUP90505.1;Name=RUP90505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119800.1;locus_tag=D8M40_01085;product=DUF4040 family protein;protein_id=RUP90505.1;transl_table=11 RBME01000001.1 Genbank gene 254414 254761 . + . ID=gene-D8M40_01090;Name=D8M40_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01090 RBME01000001.1 Protein Homology CDS 254414 254761 . + 0 ID=cds-RUP90506.1;Parent=gene-D8M40_01090;Dbxref=NCBI_GP:RUP90506.1;Name=RUP90506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845332.1;locus_tag=D8M40_01090;product=Na+/H+ antiporter subunit C;protein_id=RUP90506.1;transl_table=11 RBME01000001.1 Genbank gene 254761 256347 . + . ID=gene-D8M40_01095;Name=D8M40_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01095 RBME01000001.1 Protein Homology CDS 254761 256347 . + 0 ID=cds-RUP90507.1;Parent=gene-D8M40_01095;Dbxref=NCBI_GP:RUP90507.1;Name=RUP90507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119798.1;locus_tag=D8M40_01095;product=monovalent cation/H+ antiporter subunit D family protein;protein_id=RUP90507.1;transl_table=11 RBME01000001.1 Genbank gene 256347 256718 . + . ID=gene-D8M40_01100;Name=D8M40_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01100 RBME01000001.1 Protein Homology CDS 256347 256718 . + 0 ID=cds-RUP90508.1;Parent=gene-D8M40_01100;Dbxref=NCBI_GP:RUP90508.1;Name=RUP90508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119797.1;locus_tag=D8M40_01100;product=sodium:proton antiporter;protein_id=RUP90508.1;transl_table=11 RBME01000001.1 Genbank gene 256718 256978 . + . ID=gene-D8M40_01105;Name=D8M40_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01105 RBME01000001.1 Protein Homology CDS 256718 256978 . + 0 ID=cds-RUP90509.1;Parent=gene-D8M40_01105;Dbxref=NCBI_GP:RUP90509.1;Name=RUP90509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768458.1;locus_tag=D8M40_01105;product=pesticidal protein Cry26Aa;protein_id=RUP90509.1;transl_table=11 RBME01000001.1 Genbank gene 256978 257370 . + . ID=gene-D8M40_01110;Name=D8M40_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01110 RBME01000001.1 Protein Homology CDS 256978 257370 . + 0 ID=cds-RUP90510.1;Parent=gene-D8M40_01110;Dbxref=NCBI_GP:RUP90510.1;Name=RUP90510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821683.1;locus_tag=D8M40_01110;product=sodium:proton antiporter;protein_id=RUP90510.1;transl_table=11 RBME01000001.1 Genbank gene 257525 258847 . + . ID=gene-D8M40_01115;Name=D8M40_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01115 RBME01000001.1 Protein Homology CDS 257525 258847 . + 0 ID=cds-RUP90511.1;Parent=gene-D8M40_01115;Dbxref=NCBI_GP:RUP90511.1;Name=RUP90511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281891.1;locus_tag=D8M40_01115;product=ammonium transporter;protein_id=RUP90511.1;transl_table=11 RBME01000001.1 Genbank gene 258914 259252 . + . ID=gene-D8M40_01120;Name=D8M40_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01120 RBME01000001.1 Protein Homology CDS 258914 259252 . + 0 ID=cds-RUP90512.1;Parent=gene-D8M40_01120;Dbxref=NCBI_GP:RUP90512.1;Name=RUP90512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295327.1;locus_tag=D8M40_01120;product=P-II family nitrogen regulator;protein_id=RUP90512.1;transl_table=11 RBME01000001.1 Genbank gene 259404 260993 . + . ID=gene-D8M40_01125;Name=D8M40_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01125 RBME01000001.1 Protein Homology CDS 259404 260993 . + 0 ID=cds-RUP90513.1;Parent=gene-D8M40_01125;Dbxref=NCBI_GP:RUP90513.1;Name=RUP90513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528857.1;locus_tag=D8M40_01125;product=signal recognition particle protein;protein_id=RUP90513.1;transl_table=11 RBME01000001.1 Genbank gene 261032 263119 . - . ID=gene-D8M40_01130;Name=D8M40_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01130 RBME01000001.1 Protein Homology CDS 261032 263119 . - 0 ID=cds-RUP90514.1;Parent=gene-D8M40_01130;Dbxref=NCBI_GP:RUP90514.1;Name=RUP90514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119791.1;locus_tag=D8M40_01130;product=acyltransferase;protein_id=RUP90514.1;transl_table=11 RBME01000001.1 Genbank gene 263414 263908 . + . ID=gene-D8M40_01135;Name=D8M40_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01135 RBME01000001.1 Protein Homology CDS 263414 263908 . + 0 ID=cds-RUP90515.1;Parent=gene-D8M40_01135;Dbxref=NCBI_GP:RUP90515.1;Name=RUP90515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767956.1;locus_tag=D8M40_01135;product=30S ribosomal protein S16;protein_id=RUP90515.1;transl_table=11 RBME01000001.1 Genbank gene 264021 264521 . + . ID=gene-D8M40_01140;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=D8M40_01140 RBME01000001.1 Protein Homology CDS 264021 264521 . + 0 ID=cds-RUP90516.1;Parent=gene-D8M40_01140;Dbxref=NCBI_GP:RUP90516.1;Name=RUP90516.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190425.1;locus_tag=D8M40_01140;product=ribosome maturation factor RimM;protein_id=RUP90516.1;transl_table=11 RBME01000001.1 Genbank gene 264506 265384 . + . ID=gene-D8M40_01145;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=D8M40_01145 RBME01000001.1 Protein Homology CDS 264506 265384 . + 0 ID=cds-RUP90517.1;Parent=gene-D8M40_01145;Dbxref=NCBI_GP:RUP90517.1;Name=RUP90517.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401216.1;locus_tag=D8M40_01145;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=RUP90517.1;transl_table=11 RBME01000001.1 Genbank gene 265395 267746 . + . ID=gene-D8M40_01150;Name=D8M40_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01150 RBME01000001.1 Protein Homology CDS 265395 267746 . + 0 ID=cds-RUP90518.1;Parent=gene-D8M40_01150;Dbxref=NCBI_GP:RUP90518.1;Name=RUP90518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119787.1;locus_tag=D8M40_01150;product=RNA-binding transcriptional accessory protein;protein_id=RUP90518.1;transl_table=11 RBME01000001.1 Genbank gene 267727 267954 . + . ID=gene-D8M40_01155;Name=D8M40_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01155 RBME01000001.1 GeneMarkS+ CDS 267727 267954 . + 0 ID=cds-RUP90519.1;Parent=gene-D8M40_01155;Dbxref=NCBI_GP:RUP90519.1;Name=RUP90519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01155;product=hypothetical protein;protein_id=RUP90519.1;transl_table=11 RBME01000001.1 Genbank gene 268254 269453 . - . ID=gene-D8M40_01160;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=D8M40_01160 RBME01000001.1 Protein Homology CDS 268254 269453 . - 0 ID=cds-RUP90520.1;Parent=gene-D8M40_01160;Dbxref=NCBI_GP:RUP90520.1;Name=RUP90520.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119784.1;locus_tag=D8M40_01160;product=thiamine biosynthesis protein ThiF;protein_id=RUP90520.1;transl_table=11 RBME01000001.1 Genbank gene 269463 270248 . - . ID=gene-D8M40_01165;Name=D8M40_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01165 RBME01000001.1 Protein Homology CDS 269463 270248 . - 0 ID=cds-RUP90521.1;Parent=gene-D8M40_01165;Dbxref=NCBI_GP:RUP90521.1;Name=RUP90521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767935.1;locus_tag=D8M40_01165;product=thiazole synthase;protein_id=RUP90521.1;transl_table=11 RBME01000001.1 Genbank gene 270257 270481 . - . ID=gene-D8M40_01170;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=D8M40_01170 RBME01000001.1 Protein Homology CDS 270257 270481 . - 0 ID=cds-RUP90522.1;Parent=gene-D8M40_01170;Dbxref=NCBI_GP:RUP90522.1;Name=RUP90522.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119782.1;locus_tag=D8M40_01170;product=sulfur carrier protein ThiS;protein_id=RUP90522.1;transl_table=11 RBME01000001.1 Genbank gene 270506 271735 . - . ID=gene-D8M40_01175;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=D8M40_01175 RBME01000001.1 Protein Homology CDS 270506 271735 . - 0 ID=cds-RUP90786.1;Parent=gene-D8M40_01175;Dbxref=NCBI_GP:RUP90786.1;Name=RUP90786.1;gbkey=CDS;gene=thiO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767933.1;locus_tag=D8M40_01175;product=glycine oxidase ThiO;protein_id=RUP90786.1;transl_table=11 RBME01000001.1 Genbank gene 272572 272916 . + . ID=gene-D8M40_01180;Name=D8M40_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01180 RBME01000001.1 Protein Homology CDS 272572 272916 . + 0 ID=cds-RUP90523.1;Parent=gene-D8M40_01180;Dbxref=NCBI_GP:RUP90523.1;Name=RUP90523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190405.1;locus_tag=D8M40_01180;product=50S ribosomal protein L19;protein_id=RUP90523.1;transl_table=11 RBME01000001.1 Genbank gene 273173 273889 . + . ID=gene-D8M40_01185;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D8M40_01185 RBME01000001.1 Protein Homology CDS 273173 273889 . + 0 ID=cds-RUP90787.1;Parent=gene-D8M40_01185;Dbxref=NCBI_GP:RUP90787.1;Name=RUP90787.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821700.1;locus_tag=D8M40_01185;product=signal peptidase I;protein_id=RUP90787.1;transl_table=11 RBME01000001.1 Genbank gene 273867 274607 . + . ID=gene-D8M40_01190;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D8M40_01190 RBME01000001.1 Protein Homology CDS 273867 274607 . + 0 ID=cds-RUP90524.1;Parent=gene-D8M40_01190;Dbxref=NCBI_GP:RUP90524.1;Name=RUP90524.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119778.1;locus_tag=D8M40_01190;product=signal peptidase I;protein_id=RUP90524.1;transl_table=11 RBME01000001.1 Genbank gene 274678 275298 . + . ID=gene-D8M40_01195;Name=D8M40_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01195 RBME01000001.1 Protein Homology CDS 274678 275298 . + 0 ID=cds-RUP90525.1;Parent=gene-D8M40_01195;Dbxref=NCBI_GP:RUP90525.1;Name=RUP90525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119777.1;locus_tag=D8M40_01195;product=ribonuclease HII;protein_id=RUP90525.1;transl_table=11 RBME01000001.1 Genbank gene 275463 275768 . + . ID=gene-D8M40_01200;Name=D8M40_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01200 RBME01000001.1 Protein Homology CDS 275463 275768 . + 0 ID=cds-RUP90526.1;Parent=gene-D8M40_01200;Dbxref=NCBI_GP:RUP90526.1;Name=RUP90526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601237.1;locus_tag=D8M40_01200;product=DUF2469 family protein;protein_id=RUP90526.1;transl_table=11 RBME01000001.1 Genbank gene 276093 276494 . + . ID=gene-D8M40_01205;Name=D8M40_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01205 RBME01000001.1 Protein Homology CDS 276093 276494 . + 0 ID=cds-RUP90527.1;Parent=gene-D8M40_01205;Dbxref=NCBI_GP:RUP90527.1;Name=RUP90527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580524.1;locus_tag=D8M40_01205;product=YraN family protein;protein_id=RUP90527.1;transl_table=11 RBME01000001.1 Genbank gene 276484 278031 . + . ID=gene-D8M40_01210;Name=D8M40_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01210 RBME01000001.1 Protein Homology CDS 276484 278031 . + 0 ID=cds-RUP90528.1;Parent=gene-D8M40_01210;Dbxref=NCBI_GP:RUP90528.1;Name=RUP90528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119774.1;locus_tag=D8M40_01210;product=ATP-binding protein;protein_id=RUP90528.1;transl_table=11 RBME01000001.1 Genbank gene 278079 279293 . + . ID=gene-D8M40_01215;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=D8M40_01215 RBME01000001.1 Protein Homology CDS 278079 279293 . + 0 ID=cds-RUP90788.1;Parent=gene-D8M40_01215;Dbxref=NCBI_GP:RUP90788.1;Name=RUP90788.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063738.1;locus_tag=D8M40_01215;product=DNA-protecting protein DprA;protein_id=RUP90788.1;transl_table=11 RBME01000001.1 Genbank gene 279340 280335 . + . ID=gene-D8M40_01220;Name=D8M40_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01220 RBME01000001.1 Protein Homology CDS 279340 280335 . + 0 ID=cds-RUP90529.1;Parent=gene-D8M40_01220;Dbxref=NCBI_GP:RUP90529.1;Name=RUP90529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119772.1;locus_tag=D8M40_01220;product=tyrosine recombinase XerC;protein_id=RUP90529.1;transl_table=11 RBME01000001.1 Genbank gene 280391 280951 . - . ID=gene-D8M40_01225;Name=D8M40_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01225 RBME01000001.1 Protein Homology CDS 280391 280951 . - 0 ID=cds-RUP90530.1;Parent=gene-D8M40_01225;Dbxref=NCBI_GP:RUP90530.1;Name=RUP90530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119771.1;locus_tag=D8M40_01225;product=M23 family metallopeptidase;protein_id=RUP90530.1;transl_table=11 RBME01000001.1 Genbank gene 281427 282245 . + . ID=gene-D8M40_01230;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=D8M40_01230 RBME01000001.1 Protein Homology CDS 281427 282245 . + 0 ID=cds-RUP90531.1;Parent=gene-D8M40_01230;Dbxref=NCBI_GP:RUP90531.1;Name=RUP90531.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325233.1;locus_tag=D8M40_01230;product=30S ribosomal protein S2;protein_id=RUP90531.1;transl_table=11 RBME01000001.1 Genbank gene 282336 283163 . + . ID=gene-D8M40_01235;Name=D8M40_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01235 RBME01000001.1 Protein Homology CDS 282336 283163 . + 0 ID=cds-RUP90532.1;Parent=gene-D8M40_01235;Dbxref=NCBI_GP:RUP90532.1;Name=RUP90532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013888634.1;locus_tag=D8M40_01235;product=elongation factor Ts;protein_id=RUP90532.1;transl_table=11 RBME01000001.1 Genbank gene 283386 284126 . + . ID=gene-D8M40_01240;Name=D8M40_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01240 RBME01000001.1 Protein Homology CDS 283386 284126 . + 0 ID=cds-RUP90533.1;Parent=gene-D8M40_01240;Dbxref=NCBI_GP:RUP90533.1;Name=RUP90533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401191.1;locus_tag=D8M40_01240;product=UMP kinase;protein_id=RUP90533.1;transl_table=11 RBME01000001.1 Genbank gene 284199 284756 . + . ID=gene-D8M40_01245;Name=D8M40_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01245 RBME01000001.1 Protein Homology CDS 284199 284756 . + 0 ID=cds-RUP90534.1;Parent=gene-D8M40_01245;Dbxref=NCBI_GP:RUP90534.1;Name=RUP90534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845378.1;locus_tag=D8M40_01245;product=ribosome recycling factor;protein_id=RUP90534.1;transl_table=11 RBME01000001.1 Genbank gene 284934 285827 . + . ID=gene-D8M40_01250;Name=D8M40_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01250 RBME01000001.1 Protein Homology CDS 284934 285827 . + 0 ID=cds-RUP90535.1;Parent=gene-D8M40_01250;Dbxref=NCBI_GP:RUP90535.1;Name=RUP90535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821712.1;locus_tag=D8M40_01250;product=phosphatidate cytidylyltransferase;protein_id=RUP90535.1;transl_table=11 RBME01000001.1 Genbank gene 285868 286995 . + . ID=gene-D8M40_01255;Name=D8M40_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01255 RBME01000001.1 Protein Homology CDS 285868 286995 . + 0 ID=cds-RUP90789.1;Parent=gene-D8M40_01255;Dbxref=NCBI_GP:RUP90789.1;Name=RUP90789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011075666.1;locus_tag=D8M40_01255;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=RUP90789.1;transl_table=11 RBME01000001.1 Genbank gene 287101 287538 . - . ID=gene-D8M40_01260;Name=D8M40_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01260 RBME01000001.1 Protein Homology CDS 287101 287538 . - 0 ID=cds-RUP90536.1;Parent=gene-D8M40_01260;Dbxref=NCBI_GP:RUP90536.1;Name=RUP90536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767908.1;locus_tag=D8M40_01260;product=DUF2631 domain-containing protein;protein_id=RUP90536.1;transl_table=11 RBME01000001.1 Genbank gene 287750 288964 . + . ID=gene-D8M40_01265;Name=D8M40_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01265 RBME01000001.1 Protein Homology CDS 287750 288964 . + 0 ID=cds-RUP90790.1;Parent=gene-D8M40_01265;Dbxref=NCBI_GP:RUP90790.1;Name=RUP90790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010935107.1;locus_tag=D8M40_01265;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=RUP90790.1;transl_table=11 RBME01000001.1 Genbank gene 288991 290211 . + . ID=gene-D8M40_01270;Name=D8M40_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01270 RBME01000001.1 Protein Homology CDS 288991 290211 . + 0 ID=cds-RUP90537.1;Parent=gene-D8M40_01270;Dbxref=NCBI_GP:RUP90537.1;Name=RUP90537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278712.1;locus_tag=D8M40_01270;product=RIP metalloprotease;protein_id=RUP90537.1;transl_table=11 RBME01000001.1 Genbank gene 290279 291442 . + . ID=gene-D8M40_01275;Name=D8M40_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01275 RBME01000001.1 Protein Homology CDS 290279 291442 . + 0 ID=cds-RUP90538.1;Parent=gene-D8M40_01275;Dbxref=NCBI_GP:RUP90538.1;Name=RUP90538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190368.1;locus_tag=D8M40_01275;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=RUP90538.1;transl_table=11 RBME01000001.1 Genbank gene 291475 293325 . + . ID=gene-D8M40_01280;Name=D8M40_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01280 RBME01000001.1 Protein Homology CDS 291475 293325 . + 0 ID=cds-RUP90539.1;Parent=gene-D8M40_01280;Dbxref=NCBI_GP:RUP90539.1;Name=RUP90539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119760.1;locus_tag=D8M40_01280;product=penicillin-binding transpeptidase domain-containing protein;protein_id=RUP90539.1;transl_table=11 RBME01000001.1 Genbank gene 293388 294878 . + . ID=gene-D8M40_01285;Name=D8M40_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01285 RBME01000001.1 Protein Homology CDS 293388 294878 . + 0 ID=cds-RUP90540.1;Parent=gene-D8M40_01285;Dbxref=NCBI_GP:RUP90540.1;Name=RUP90540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849213.1;locus_tag=D8M40_01285;product=amino acid permease;protein_id=RUP90540.1;transl_table=11 RBME01000001.1 Genbank gene 295022 295888 . + . ID=gene-D8M40_01290;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=D8M40_01290 RBME01000001.1 Protein Homology CDS 295022 295888 . + 0 ID=cds-RUP90541.1;Parent=gene-D8M40_01290;Dbxref=NCBI_GP:RUP90541.1;Name=RUP90541.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190366.1;locus_tag=D8M40_01290;product=type I methionyl aminopeptidase;protein_id=RUP90541.1;transl_table=11 RBME01000001.1 Genbank gene 295898 297343 . - . ID=gene-D8M40_01295;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=D8M40_01295 RBME01000001.1 Protein Homology CDS 295898 297343 . - 0 ID=cds-RUP90542.1;Parent=gene-D8M40_01295;Dbxref=NCBI_GP:RUP90542.1;Name=RUP90542.1;gbkey=CDS;gene=mtr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119756.1;locus_tag=D8M40_01295;product=mycothione reductase;protein_id=RUP90542.1;transl_table=11 RBME01000001.1 Genbank gene 297343 298371 . - . ID=gene-D8M40_01300;Name=D8M40_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01300 RBME01000001.1 Protein Homology CDS 297343 298371 . - 0 ID=cds-RUP90543.1;Parent=gene-D8M40_01300;Dbxref=NCBI_GP:RUP90543.1;Name=RUP90543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12697.5;locus_tag=D8M40_01300;product=alpha/beta hydrolase;protein_id=RUP90543.1;transl_table=11 RBME01000001.1 Genbank gene 298672 300102 . + . ID=gene-D8M40_01305;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=D8M40_01305 RBME01000001.1 Protein Homology CDS 298672 300102 . + 0 ID=cds-RUP90791.1;Parent=gene-D8M40_01305;Dbxref=NCBI_GP:RUP90791.1;Name=RUP90791.1;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190354.1;locus_tag=D8M40_01305;product=malate dehydrogenase (quinone);protein_id=RUP90791.1;transl_table=11 RBME01000001.1 Genbank gene 300252 301745 . - . ID=gene-D8M40_01310;Name=D8M40_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01310 RBME01000001.1 Protein Homology CDS 300252 301745 . - 0 ID=cds-RUP90544.1;Parent=gene-D8M40_01310;Dbxref=NCBI_GP:RUP90544.1;Name=RUP90544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119753.1;locus_tag=D8M40_01310;product=YdiU family protein;protein_id=RUP90544.1;transl_table=11 RBME01000001.1 Genbank gene 301749 302681 . - . ID=gene-D8M40_01315;Name=D8M40_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01315 RBME01000001.1 Protein Homology CDS 301749 302681 . - 0 ID=cds-RUP90545.1;Parent=gene-D8M40_01315;Dbxref=NCBI_GP:RUP90545.1;Name=RUP90545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02423.13;locus_tag=D8M40_01315;product=ornithine cyclodeaminase family protein;protein_id=RUP90545.1;transl_table=11 RBME01000001.1 Genbank gene 302891 303691 . - . ID=gene-D8M40_01320;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D8M40_01320 RBME01000001.1 Protein Homology CDS 302891 303691 . - 0 ID=cds-RUP90546.1;Parent=gene-D8M40_01320;Dbxref=NCBI_GP:RUP90546.1;Name=RUP90546.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119751.1;locus_tag=D8M40_01320;product=peroxide stress protein YaaA;protein_id=RUP90546.1;transl_table=11 RBME01000001.1 Genbank gene 303735 305585 . + . ID=gene-D8M40_01325;Name=D8M40_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01325 RBME01000001.1 Protein Homology CDS 303735 305585 . + 0 ID=cds-RUP90547.1;Parent=gene-D8M40_01325;Dbxref=NCBI_GP:RUP90547.1;Name=RUP90547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119750.1;locus_tag=D8M40_01325;product=proline--tRNA ligase;protein_id=RUP90547.1;transl_table=11 RBME01000001.1 Genbank gene 305589 306479 . - . ID=gene-D8M40_01330;Name=D8M40_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01330 RBME01000001.1 Protein Homology CDS 305589 306479 . - 0 ID=cds-RUP90548.1;Parent=gene-D8M40_01330;Dbxref=NCBI_GP:RUP90548.1;Name=RUP90548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328694.1;locus_tag=D8M40_01330;product=PhzF family phenazine biosynthesis protein;protein_id=RUP90548.1;transl_table=11 RBME01000001.1 Genbank gene 306489 307334 . - . ID=gene-D8M40_01335;Name=D8M40_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01335 RBME01000001.1 GeneMarkS+ CDS 306489 307334 . - 0 ID=cds-RUP90549.1;Parent=gene-D8M40_01335;Dbxref=NCBI_GP:RUP90549.1;Name=RUP90549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01335;product=hypothetical protein;protein_id=RUP90549.1;transl_table=11 RBME01000001.1 Genbank gene 307576 308286 . + . ID=gene-D8M40_01340;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=D8M40_01340 RBME01000001.1 Protein Homology CDS 307576 308286 . + 0 ID=cds-RUP90792.1;Parent=gene-D8M40_01340;Dbxref=NCBI_GP:RUP90792.1;Name=RUP90792.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767882.1;locus_tag=D8M40_01340;product=ribosome maturation factor RimP;protein_id=RUP90792.1;transl_table=11 RBME01000001.1 Genbank gene 308298 309533 . + . ID=gene-D8M40_01345;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=D8M40_01345 RBME01000001.1 Protein Homology CDS 308298 309533 . + 0 ID=cds-RUP90550.1;Parent=gene-D8M40_01345;Dbxref=NCBI_GP:RUP90550.1;Name=RUP90550.1;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119746.1;locus_tag=D8M40_01345;product=transcription termination/antitermination protein NusA;protein_id=RUP90550.1;transl_table=11 RBME01000001.1 Genbank gene 309663 309971 . + . ID=gene-D8M40_01350;Name=D8M40_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01350 RBME01000001.1 Protein Homology CDS 309663 309971 . + 0 ID=cds-RUP90551.1;Parent=gene-D8M40_01350;Dbxref=NCBI_GP:RUP90551.1;Name=RUP90551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840090.1;locus_tag=D8M40_01350;product=YlxR family protein;protein_id=RUP90551.1;transl_table=11 RBME01000001.1 Genbank gene 310073 313036 . + . ID=gene-D8M40_01355;Name=D8M40_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01355 RBME01000001.1 Protein Homology CDS 310073 313036 . + 0 ID=cds-RUP90552.1;Parent=gene-D8M40_01355;Dbxref=NCBI_GP:RUP90552.1;Name=RUP90552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298016.1;locus_tag=D8M40_01355;product=translation initiation factor IF-2;protein_id=RUP90552.1;transl_table=11 RBME01000001.1 Genbank gene 313335 313766 . + . ID=gene-D8M40_01360;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=D8M40_01360 RBME01000001.1 Protein Homology CDS 313335 313766 . + 0 ID=cds-RUP90553.1;Parent=gene-D8M40_01360;Dbxref=NCBI_GP:RUP90553.1;Name=RUP90553.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278773.1;locus_tag=D8M40_01360;product=30S ribosome-binding factor RbfA;protein_id=RUP90553.1;transl_table=11 RBME01000001.1 Genbank gene 313766 314731 . + . ID=gene-D8M40_01365;Name=D8M40_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01365 RBME01000001.1 Protein Homology CDS 313766 314731 . + 0 ID=cds-RUP90554.1;Parent=gene-D8M40_01365;Dbxref=NCBI_GP:RUP90554.1;Name=RUP90554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119743.1;locus_tag=D8M40_01365;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=RUP90554.1;transl_table=11 RBME01000001.1 Genbank gene 314728 316056 . + . ID=gene-D8M40_01370;Name=D8M40_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01370 RBME01000001.1 Protein Homology CDS 314728 316056 . + 0 ID=cds-RUP90793.1;Parent=gene-D8M40_01370;Dbxref=NCBI_GP:RUP90793.1;Name=RUP90793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119742.1;locus_tag=D8M40_01370;product=MATE family efflux transporter;protein_id=RUP90793.1;transl_table=11 RBME01000001.1 Genbank gene 316053 316949 . + . ID=gene-D8M40_01375;Name=D8M40_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01375 RBME01000001.1 Protein Homology CDS 316053 316949 . + 0 ID=cds-RUP90555.1;Parent=gene-D8M40_01375;Dbxref=NCBI_GP:RUP90555.1;Name=RUP90555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119741.1;locus_tag=D8M40_01375;product=metallophosphoesterase;protein_id=RUP90555.1;transl_table=11 RBME01000001.1 Genbank gene 316946 317611 . + . ID=gene-D8M40_01380;Name=D8M40_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01380 RBME01000001.1 Protein Homology CDS 316946 317611 . + 0 ID=cds-RUP90556.1;Parent=gene-D8M40_01380;Dbxref=NCBI_GP:RUP90556.1;Name=RUP90556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021015.1;locus_tag=D8M40_01380;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=RUP90556.1;transl_table=11 RBME01000001.1 Genbank gene 317669 318655 . - . ID=gene-D8M40_01385;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=D8M40_01385 RBME01000001.1 Protein Homology CDS 317669 318655 . - 0 ID=cds-RUP90794.1;Parent=gene-D8M40_01385;Dbxref=NCBI_GP:RUP90794.1;Name=RUP90794.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014523408.1;locus_tag=D8M40_01385;product=tRNA pseudouridine(55) synthase TruB;protein_id=RUP90794.1;transl_table=11 RBME01000001.1 Genbank gene 318788 319873 . + . ID=gene-D8M40_01390;Name=D8M40_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01390 RBME01000001.1 Protein Homology CDS 318788 319873 . + 0 ID=cds-RUP90557.1;Parent=gene-D8M40_01390;Dbxref=NCBI_GP:RUP90557.1;Name=RUP90557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119738.1;locus_tag=D8M40_01390;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=RUP90557.1;transl_table=11 RBME01000001.1 Genbank gene 319952 320221 . + . ID=gene-D8M40_01395;Name=D8M40_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01395 RBME01000001.1 Protein Homology CDS 319952 320221 . + 0 ID=cds-RUP90558.1;Parent=gene-D8M40_01395;Dbxref=NCBI_GP:RUP90558.1;Name=RUP90558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528980.1;locus_tag=D8M40_01395;product=30S ribosomal protein S15;protein_id=RUP90558.1;transl_table=11 RBME01000001.1 Genbank gene 320470 322776 . + . ID=gene-D8M40_01400;Name=D8M40_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01400 RBME01000001.1 Protein Homology CDS 320470 322776 . + 0 ID=cds-RUP90559.1;Parent=gene-D8M40_01400;Dbxref=NCBI_GP:RUP90559.1;Name=RUP90559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119736.1;locus_tag=D8M40_01400;product=polyribonucleotide nucleotidyltransferase;protein_id=RUP90559.1;transl_table=11 RBME01000001.1 Genbank gene 322866 323591 . - . ID=gene-D8M40_01405;Name=D8M40_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01405 RBME01000001.1 GeneMarkS+ CDS 322866 323591 . - 0 ID=cds-RUP90560.1;Parent=gene-D8M40_01405;Dbxref=NCBI_GP:RUP90560.1;Name=RUP90560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01405;product=hypothetical protein;protein_id=RUP90560.1;transl_table=11 RBME01000001.1 Genbank gene 323739 324488 . + . ID=gene-D8M40_01410;Name=D8M40_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01410 RBME01000001.1 Protein Homology CDS 323739 324488 . + 0 ID=cds-RUP90561.1;Parent=gene-D8M40_01410;Dbxref=NCBI_GP:RUP90561.1;Name=RUP90561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014525922.1;locus_tag=D8M40_01410;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=RUP90561.1;transl_table=11 RBME01000001.1 Genbank gene 324492 325247 . + . ID=gene-D8M40_01415;Name=D8M40_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01415 RBME01000001.1 Protein Homology CDS 324492 325247 . + 0 ID=cds-RUP90562.1;Parent=gene-D8M40_01415;Dbxref=NCBI_GP:RUP90562.1;Name=RUP90562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278811.1;locus_tag=D8M40_01415;product=FAD-dependent thymidylate synthase;protein_id=RUP90562.1;transl_table=11 RBME01000001.1 Genbank gene 325306 326214 . + . ID=gene-D8M40_01420;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=D8M40_01420 RBME01000001.1 Protein Homology CDS 325306 326214 . + 0 ID=cds-RUP90563.1;Parent=gene-D8M40_01420;Dbxref=NCBI_GP:RUP90563.1;Name=RUP90563.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011897392.1;locus_tag=D8M40_01420;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=RUP90563.1;transl_table=11 RBME01000001.1 Genbank gene 326215 328431 . + . ID=gene-D8M40_01425;Name=D8M40_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01425 RBME01000001.1 Protein Homology CDS 326215 328431 . + 0 ID=cds-RUP90564.1;Parent=gene-D8M40_01425;Dbxref=NCBI_GP:RUP90564.1;Name=RUP90564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325141.1;locus_tag=D8M40_01425;product=RNase J family beta-CASP ribonuclease;protein_id=RUP90564.1;transl_table=11 RBME01000001.1 Genbank gene 328497 329123 . + . ID=gene-D8M40_01430;Name=D8M40_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01430 RBME01000001.1 Protein Homology CDS 328497 329123 . + 0 ID=cds-RUP90565.1;Parent=gene-D8M40_01430;Dbxref=NCBI_GP:RUP90565.1;Name=RUP90565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119730.1;locus_tag=D8M40_01430;product=TIGR03085 family protein;protein_id=RUP90565.1;transl_table=11 RBME01000001.1 Genbank gene 329209 332520 . + . ID=gene-D8M40_01435;Name=D8M40_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01435 RBME01000001.1 Protein Homology CDS 329209 332520 . + 0 ID=cds-RUP90566.1;Parent=gene-D8M40_01435;Dbxref=NCBI_GP:RUP90566.1;Name=RUP90566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119729.1;locus_tag=D8M40_01435;product=DNA translocase FtsK;protein_id=RUP90566.1;transl_table=11 RBME01000001.1 Genbank gene 332812 333831 . + . ID=gene-D8M40_01440;Name=D8M40_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01440 RBME01000001.1 Protein Homology CDS 332812 333831 . + 0 ID=cds-RUP90567.1;Parent=gene-D8M40_01440;Dbxref=NCBI_GP:RUP90567.1;Name=RUP90567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119728.1;locus_tag=D8M40_01440;product=TerC/Alx family metal homeostasis membrane protein;protein_id=RUP90567.1;transl_table=11 RBME01000001.1 Genbank gene 333868 334428 . + . ID=gene-D8M40_01445;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=D8M40_01445 RBME01000001.1 Protein Homology CDS 333868 334428 . + 0 ID=cds-RUP90568.1;Parent=gene-D8M40_01445;Dbxref=NCBI_GP:RUP90568.1;Name=RUP90568.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119727.1;locus_tag=D8M40_01445;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=RUP90568.1;transl_table=11 RBME01000001.1 Genbank gene 334513 334974 . + . ID=gene-D8M40_01450;Name=D8M40_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01450 RBME01000001.1 Protein Homology CDS 334513 334974 . + 0 ID=cds-RUP90795.1;Parent=gene-D8M40_01450;Dbxref=NCBI_GP:RUP90795.1;Name=RUP90795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845467.1;locus_tag=D8M40_01450;product=CinA family protein;protein_id=RUP90795.1;transl_table=11 RBME01000001.1 Genbank gene 335140 335514 . + . ID=gene-D8M40_01455;Name=D8M40_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01455 RBME01000001.1 Protein Homology CDS 335140 335514 . + 0 ID=cds-RUP90569.1;Parent=gene-D8M40_01455;Dbxref=NCBI_GP:RUP90569.1;Name=RUP90569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845469.1;locus_tag=D8M40_01455;product=XRE family transcriptional regulator;protein_id=RUP90569.1;transl_table=11 RBME01000001.1 Genbank gene 335639 336514 . + . ID=gene-D8M40_01460;Name=D8M40_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01460 RBME01000001.1 Protein Homology CDS 335639 336514 . + 0 ID=cds-RUP90570.1;Parent=gene-D8M40_01460;Dbxref=NCBI_GP:RUP90570.1;Name=RUP90570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821761.1;locus_tag=D8M40_01460;product=PspA/IM30 family protein;protein_id=RUP90570.1;transl_table=11 RBME01000001.1 Genbank gene 336558 336773 . + . ID=gene-D8M40_01465;Name=D8M40_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01465 RBME01000001.1 Protein Homology CDS 336558 336773 . + 0 ID=cds-RUP90571.1;Parent=gene-D8M40_01465;Dbxref=NCBI_GP:RUP90571.1;Name=RUP90571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119723.1;locus_tag=D8M40_01465;product=DUF3046 domain-containing protein;protein_id=RUP90571.1;transl_table=11 RBME01000001.1 Genbank gene 336987 338135 . + . ID=gene-D8M40_01470;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=D8M40_01470 RBME01000001.1 Protein Homology CDS 336987 338135 . + 0 ID=cds-RUP90572.1;Parent=gene-D8M40_01470;Dbxref=NCBI_GP:RUP90572.1;Name=RUP90572.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119722.1;locus_tag=D8M40_01470;product=recombinase RecA;protein_id=RUP90572.1;transl_table=11 RBME01000001.1 Genbank gene 338143 338766 . + . ID=gene-D8M40_01475;Name=D8M40_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01475 RBME01000001.1 Protein Homology CDS 338143 338766 . + 0 ID=cds-RUP90573.1;Parent=gene-D8M40_01475;Dbxref=NCBI_GP:RUP90573.1;Name=RUP90573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119721.1;locus_tag=D8M40_01475;product=regulatory protein RecX;protein_id=RUP90573.1;transl_table=11 RBME01000001.1 Genbank gene 339052 340116 . + . ID=gene-D8M40_01480;Name=D8M40_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01480 RBME01000001.1 Protein Homology CDS 339052 340116 . + 0 ID=cds-RUP90574.1;Parent=gene-D8M40_01480;Dbxref=NCBI_GP:RUP90574.1;Name=RUP90574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119720.1;locus_tag=D8M40_01480;product=ATP-binding cassette domain-containing protein;protein_id=RUP90574.1;transl_table=11 RBME01000001.1 Genbank gene 340107 341036 . + . ID=gene-D8M40_01485;Name=D8M40_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01485 RBME01000001.1 Protein Homology CDS 340107 341036 . + 0 ID=cds-RUP90575.1;Parent=gene-D8M40_01485;Dbxref=NCBI_GP:RUP90575.1;Name=RUP90575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119719.1;locus_tag=D8M40_01485;product=proline/glycine betaine ABC transporter permease;protein_id=RUP90575.1;transl_table=11 RBME01000001.1 Genbank gene 341140 342042 . + . ID=gene-D8M40_01490;Name=D8M40_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01490 RBME01000001.1 Protein Homology CDS 341140 342042 . + 0 ID=cds-RUP90576.1;Parent=gene-D8M40_01490;Dbxref=NCBI_GP:RUP90576.1;Name=RUP90576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119718.1;locus_tag=D8M40_01490;product=glycine betaine ABC transporter substrate-binding protein;protein_id=RUP90576.1;transl_table=11 RBME01000001.1 Genbank gene 342241 343779 . + . ID=gene-D8M40_01495;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=D8M40_01495 RBME01000001.1 Protein Homology CDS 342241 343779 . + 0 ID=cds-RUP90796.1;Parent=gene-D8M40_01495;Dbxref=NCBI_GP:RUP90796.1;Name=RUP90796.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242107.1;locus_tag=D8M40_01495;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=RUP90796.1;transl_table=11 RBME01000001.1 Genbank gene 343803 344522 . + . ID=gene-D8M40_01500;Name=D8M40_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01500 RBME01000001.1 GeneMarkS+ CDS 343803 344522 . + 0 ID=cds-RUP90577.1;Parent=gene-D8M40_01500;Dbxref=NCBI_GP:RUP90577.1;Name=RUP90577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01500;product=hypothetical protein;protein_id=RUP90577.1;transl_table=11 RBME01000001.1 Genbank gene 344540 345778 . - . ID=gene-D8M40_01505;Name=D8M40_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01505 RBME01000001.1 GeneMarkS+ CDS 344540 345778 . - 0 ID=cds-RUP90578.1;Parent=gene-D8M40_01505;Dbxref=NCBI_GP:RUP90578.1;Name=RUP90578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01505;product=GNAT family acetyltransferase;protein_id=RUP90578.1;transl_table=11 RBME01000001.1 Genbank gene 345779 347104 . - . ID=gene-D8M40_01510;Name=D8M40_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01510 RBME01000001.1 Protein Homology CDS 345779 347104 . - 0 ID=cds-RUP90797.1;Parent=gene-D8M40_01510;Dbxref=NCBI_GP:RUP90797.1;Name=RUP90797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297973.1;locus_tag=D8M40_01510;product=DUF349 domain-containing protein;protein_id=RUP90797.1;transl_table=11 RBME01000001.1 Genbank gene 347478 348314 . + . ID=gene-D8M40_01515;Name=D8M40_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01515 RBME01000001.1 GeneMarkS+ CDS 347478 348314 . + 0 ID=cds-RUP90579.1;Parent=gene-D8M40_01515;Dbxref=NCBI_GP:RUP90579.1;Name=RUP90579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01515;product=hypothetical protein;protein_id=RUP90579.1;transl_table=11 RBME01000001.1 Genbank gene 348410 349312 . + . ID=gene-D8M40_01520;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=D8M40_01520 RBME01000001.1 Protein Homology CDS 348410 349312 . + 0 ID=cds-RUP90798.1;Parent=gene-D8M40_01520;Dbxref=NCBI_GP:RUP90798.1;Name=RUP90798.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328628.1;locus_tag=D8M40_01520;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=RUP90798.1;transl_table=11 RBME01000001.1 Genbank gene 349346 350263 . + . ID=gene-D8M40_01525;Name=D8M40_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01525 RBME01000001.1 Protein Homology CDS 349346 350263 . + 0 ID=cds-RUP90799.1;Parent=gene-D8M40_01525;Dbxref=NCBI_GP:RUP90799.1;Name=RUP90799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021052.1;locus_tag=D8M40_01525;product=diaminopimelate epimerase;protein_id=RUP90799.1;transl_table=11 RBME01000001.1 Genbank gene 350373 350867 . - . ID=gene-D8M40_01530;Name=D8M40_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01530 RBME01000001.1 Protein Homology CDS 350373 350867 . - 0 ID=cds-RUP90800.1;Parent=gene-D8M40_01530;Dbxref=NCBI_GP:RUP90800.1;Name=RUP90800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401103.1;locus_tag=D8M40_01530;product=hypothetical protein;protein_id=RUP90800.1;transl_table=11 RBME01000001.1 Genbank gene 350977 351801 . - . ID=gene-D8M40_01535;Name=D8M40_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01535 RBME01000001.1 Protein Homology CDS 350977 351801 . - 0 ID=cds-RUP90580.1;Parent=gene-D8M40_01535;Dbxref=NCBI_GP:RUP90580.1;Name=RUP90580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119709.1;locus_tag=D8M40_01535;product=hypothetical protein;protein_id=RUP90580.1;transl_table=11 RBME01000001.1 Genbank gene 352058 353551 . + . ID=gene-D8M40_01540;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=D8M40_01540 RBME01000001.1 Protein Homology CDS 352058 353551 . + 0 ID=cds-RUP90801.1;Parent=gene-D8M40_01540;Dbxref=NCBI_GP:RUP90801.1;Name=RUP90801.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190267.1;locus_tag=D8M40_01540;product=GTPase HflX;protein_id=RUP90801.1;transl_table=11 RBME01000001.1 Genbank gene 353548 354834 . + . ID=gene-D8M40_01545;Name=D8M40_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01545 RBME01000001.1 Protein Homology CDS 353548 354834 . + 0 ID=cds-RUP90581.1;Parent=gene-D8M40_01545;Dbxref=NCBI_GP:RUP90581.1;Name=RUP90581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119707.1;locus_tag=D8M40_01545;product=nitrate reductase;protein_id=RUP90581.1;transl_table=11 RBME01000001.1 Genbank gene 354909 355688 . - . ID=gene-D8M40_01550;Name=D8M40_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01550 RBME01000001.1 Protein Homology CDS 354909 355688 . - 0 ID=cds-RUP90582.1;Parent=gene-D8M40_01550;Dbxref=NCBI_GP:RUP90582.1;Name=RUP90582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190260.1;locus_tag=D8M40_01550;product=DeoR/GlpR transcriptional regulator;protein_id=RUP90582.1;transl_table=11 RBME01000001.1 Genbank gene 355781 356488 . - . ID=gene-D8M40_01555;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=D8M40_01555 RBME01000001.1 Protein Homology CDS 355781 356488 . - 0 ID=cds-RUP90583.1;Parent=gene-D8M40_01555;Dbxref=NCBI_GP:RUP90583.1;Name=RUP90583.1;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119705.1;locus_tag=D8M40_01555;product=transcriptional repressor LexA;protein_id=RUP90583.1;transl_table=11 RBME01000001.1 Genbank gene 357323 357778 . + . ID=gene-D8M40_01560;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=D8M40_01560 RBME01000001.1 Protein Homology CDS 357323 357778 . + 0 ID=cds-RUP90584.1;Parent=gene-D8M40_01560;Dbxref=NCBI_GP:RUP90584.1;Name=RUP90584.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851822.1;locus_tag=D8M40_01560;product=transcriptional repressor NrdR;protein_id=RUP90584.1;transl_table=11 RBME01000001.1 Genbank gene 357809 361858 . - . ID=gene-D8M40_01565;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=D8M40_01565 RBME01000001.1 Protein Homology CDS 357809 361858 . - 0 ID=cds-RUP90585.1;Parent=gene-D8M40_01565;Dbxref=NCBI_GP:RUP90585.1;Name=RUP90585.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119702.1;locus_tag=D8M40_01565;product=ATP-dependent RNA helicase HrpA;protein_id=RUP90585.1;transl_table=11 RBME01000001.1 Genbank gene 362026 363018 . + . ID=gene-D8M40_01570;Name=D8M40_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01570 RBME01000001.1 GeneMarkS+ CDS 362026 363018 . + 0 ID=cds-RUP90586.1;Parent=gene-D8M40_01570;Dbxref=NCBI_GP:RUP90586.1;Name=RUP90586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01570;product=hypothetical protein;protein_id=RUP90586.1;transl_table=11 RBME01000001.1 Genbank gene 363071 364054 . - . ID=gene-D8M40_01575;Name=D8M40_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01575 RBME01000001.1 Protein Homology CDS 363071 364054 . - 0 ID=cds-RUP90587.1;Parent=gene-D8M40_01575;Dbxref=NCBI_GP:RUP90587.1;Name=RUP90587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295687.1;locus_tag=D8M40_01575;product=hydrogen peroxide-inducible genes activator;protein_id=RUP90587.1;transl_table=11 RBME01000001.1 Genbank gene 364156 365391 . + . ID=gene-D8M40_01580;Name=D8M40_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01580 RBME01000001.1 Protein Homology CDS 364156 365391 . + 0 ID=cds-RUP90588.1;Parent=gene-D8M40_01580;Dbxref=NCBI_GP:RUP90588.1;Name=RUP90588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295686.1;locus_tag=D8M40_01580;product=FAD-binding oxidoreductase;protein_id=RUP90588.1;transl_table=11 RBME01000001.1 Genbank gene 365476 368025 . - . ID=gene-D8M40_01585;Name=D8M40_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01585 RBME01000001.1 Protein Homology CDS 365476 368025 . - 0 ID=cds-RUP90802.1;Parent=gene-D8M40_01585;Dbxref=NCBI_GP:RUP90802.1;Name=RUP90802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295683.1;locus_tag=D8M40_01585;product=DUF3516 domain-containing protein;protein_id=RUP90802.1;transl_table=11 RBME01000001.1 Genbank gene 368057 369007 . - . ID=gene-D8M40_01590;Name=D8M40_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01590 RBME01000001.1 Protein Homology CDS 368057 369007 . - 0 ID=cds-RUP90589.1;Parent=gene-D8M40_01590;Dbxref=NCBI_GP:RUP90589.1;Name=RUP90589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119697.1;locus_tag=D8M40_01590;product=PAC2 family protein;protein_id=RUP90589.1;transl_table=11 RBME01000001.1 Genbank gene 369171 370382 . + . ID=gene-D8M40_01595;Name=D8M40_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01595 RBME01000001.1 Protein Homology CDS 369171 370382 . + 0 ID=cds-RUP90590.1;Parent=gene-D8M40_01595;Dbxref=NCBI_GP:RUP90590.1;Name=RUP90590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13830.4;locus_tag=D8M40_01595;product=DUF4192 domain-containing protein;protein_id=RUP90590.1;transl_table=11 RBME01000001.1 Genbank gene 370370 371362 . - . ID=gene-D8M40_01600;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D8M40_01600 RBME01000001.1 Protein Homology CDS 370370 371362 . - 0 ID=cds-RUP90591.1;Parent=gene-D8M40_01600;Dbxref=NCBI_GP:RUP90591.1;Name=RUP90591.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119695.1;locus_tag=D8M40_01600;product=UDP-glucose 4-epimerase GalE;protein_id=RUP90591.1;transl_table=11 RBME01000001.1 Genbank gene 371449 372129 . - . ID=gene-D8M40_01605;Name=D8M40_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01605 RBME01000001.1 Protein Homology CDS 371449 372129 . - 0 ID=cds-RUP90592.1;Parent=gene-D8M40_01605;Dbxref=NCBI_GP:RUP90592.1;Name=RUP90592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190235.1;locus_tag=D8M40_01605;product=metal-dependent transcriptional regulator;protein_id=RUP90592.1;transl_table=11 RBME01000001.1 Genbank gene 372250 373245 . - . ID=gene-D8M40_01610;Name=D8M40_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01610 RBME01000001.1 Protein Homology CDS 372250 373245 . - 0 ID=cds-RUP90593.1;Parent=gene-D8M40_01610;Dbxref=NCBI_GP:RUP90593.1;Name=RUP90593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190233.1;locus_tag=D8M40_01610;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP90593.1;transl_table=11 RBME01000001.1 Genbank gene 373431 373901 . - . ID=gene-D8M40_01615;Name=D8M40_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01615 RBME01000001.1 Protein Homology CDS 373431 373901 . - 0 ID=cds-RUP90803.1;Parent=gene-D8M40_01615;Dbxref=NCBI_GP:RUP90803.1;Name=RUP90803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119692.1;locus_tag=D8M40_01615;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=RUP90803.1;transl_table=11 RBME01000001.1 Genbank gene 374038 375630 . - . ID=gene-D8M40_01620;Name=D8M40_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01620 RBME01000001.1 Protein Homology CDS 374038 375630 . - 0 ID=cds-RUP90594.1;Parent=gene-D8M40_01620;Dbxref=NCBI_GP:RUP90594.1;Name=RUP90594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119691.1;locus_tag=D8M40_01620;product=class I SAM-dependent methyltransferase;protein_id=RUP90594.1;transl_table=11 RBME01000001.1 Genbank gene 375649 376170 . - . ID=gene-D8M40_01625;Name=D8M40_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01625 RBME01000001.1 Protein Homology CDS 375649 376170 . - 0 ID=cds-RUP90595.1;Parent=gene-D8M40_01625;Dbxref=NCBI_GP:RUP90595.1;Name=RUP90595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11298.6;locus_tag=D8M40_01625;product=DUF3099 domain-containing protein;protein_id=RUP90595.1;transl_table=11 RBME01000001.1 Genbank gene 376230 376472 . + . ID=gene-D8M40_01630;Name=D8M40_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01630 RBME01000001.1 Protein Homology CDS 376230 376472 . + 0 ID=cds-RUP90596.1;Parent=gene-D8M40_01630;Dbxref=NCBI_GP:RUP90596.1;Name=RUP90596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063571.1;locus_tag=D8M40_01630;product=DUF3039 domain-containing protein;protein_id=RUP90596.1;transl_table=11 RBME01000001.1 Genbank gene 376582 378390 . + . ID=gene-D8M40_01635;Name=D8M40_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01635 RBME01000001.1 Protein Homology CDS 376582 378390 . + 0 ID=cds-RUP90597.1;Parent=gene-D8M40_01635;Dbxref=NCBI_GP:RUP90597.1;Name=RUP90597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119688.1;locus_tag=D8M40_01635;product=DEAD/DEAH box helicase;protein_id=RUP90597.1;transl_table=11 RBME01000001.1 Genbank gene 378473 379036 . + . ID=gene-D8M40_01640;Name=D8M40_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01640 RBME01000001.1 GeneMarkS+ CDS 378473 379036 . + 0 ID=cds-RUP90598.1;Parent=gene-D8M40_01640;Dbxref=NCBI_GP:RUP90598.1;Name=RUP90598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01640;product=DUF4190 domain-containing protein;protein_id=RUP90598.1;transl_table=11 RBME01000001.1 Genbank gene 379165 380523 . - . ID=gene-D8M40_01645;Name=D8M40_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01645 RBME01000001.1 Protein Homology CDS 379165 380523 . - 0 ID=cds-RUP90804.1;Parent=gene-D8M40_01645;Dbxref=NCBI_GP:RUP90804.1;Name=RUP90804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119686.1;locus_tag=D8M40_01645;product=RNA polymerase sigma factor;protein_id=RUP90804.1;transl_table=11 RBME01000001.1 Genbank gene 380779 381543 . - . ID=gene-D8M40_01650;Name=D8M40_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01650 RBME01000001.1 Protein Homology CDS 380779 381543 . - 0 ID=cds-RUP90599.1;Parent=gene-D8M40_01650;Dbxref=NCBI_GP:RUP90599.1;Name=RUP90599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119685.1;locus_tag=D8M40_01650;product=ROK family protein;protein_id=RUP90599.1;transl_table=11 RBME01000001.1 Genbank gene 381588 382511 . + . ID=gene-D8M40_01655;Name=D8M40_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01655 RBME01000001.1 Protein Homology CDS 381588 382511 . + 0 ID=cds-RUP90600.1;Parent=gene-D8M40_01655;Dbxref=NCBI_GP:RUP90600.1;Name=RUP90600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859848.1;locus_tag=D8M40_01655;product=inositol monophosphatase;protein_id=RUP90600.1;transl_table=11 RBME01000001.1 Genbank gene 382704 382994 . + . ID=gene-D8M40_01660;Name=D8M40_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01660 RBME01000001.1 Protein Homology CDS 382704 382994 . + 0 ID=cds-RUP90601.1;Parent=gene-D8M40_01660;Dbxref=NCBI_GP:RUP90601.1;Name=RUP90601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601114.1;locus_tag=D8M40_01660;product=DUF4193 domain-containing protein;protein_id=RUP90601.1;transl_table=11 RBME01000001.1 Genbank gene 383061 383627 . - . ID=gene-D8M40_01665;Name=D8M40_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01665 RBME01000001.1 Protein Homology CDS 383061 383627 . - 0 ID=cds-RUP90805.1;Parent=gene-D8M40_01665;Dbxref=NCBI_GP:RUP90805.1;Name=RUP90805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119682.1;locus_tag=D8M40_01665;product=DUF3093 domain-containing protein;protein_id=RUP90805.1;transl_table=11 RBME01000001.1 Genbank gene 383755 384207 . + . ID=gene-D8M40_01670;Name=D8M40_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01670 RBME01000001.1 Protein Homology CDS 383755 384207 . + 0 ID=cds-RUP90602.1;Parent=gene-D8M40_01670;Dbxref=NCBI_GP:RUP90602.1;Name=RUP90602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011210286.1;locus_tag=D8M40_01670;product=dUTP diphosphatase;protein_id=RUP90602.1;transl_table=11 RBME01000001.1 Genbank gene 384476 385396 . + . ID=gene-D8M40_01675;Name=D8M40_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01675 RBME01000001.1 Protein Homology CDS 384476 385396 . + 0 ID=cds-RUP90603.1;Parent=gene-D8M40_01675;Dbxref=NCBI_GP:RUP90603.1;Name=RUP90603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119679.1;locus_tag=D8M40_01675;product=DUF3710 domain-containing protein;protein_id=RUP90603.1;transl_table=11 RBME01000001.1 Genbank gene 385399 386640 . + . ID=gene-D8M40_01680;Name=D8M40_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01680 RBME01000001.1 Protein Homology CDS 385399 386640 . + 0 ID=cds-RUP90604.1;Parent=gene-D8M40_01680;Dbxref=NCBI_GP:RUP90604.1;Name=RUP90604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119678.1;locus_tag=D8M40_01680;product=class I SAM-dependent RNA methyltransferase;protein_id=RUP90604.1;transl_table=11 RBME01000001.1 Genbank gene 386734 388623 . + . ID=gene-D8M40_01685;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=D8M40_01685 RBME01000001.1 Protein Homology CDS 386734 388623 . + 0 ID=cds-RUP90605.1;Parent=gene-D8M40_01685;Dbxref=NCBI_GP:RUP90605.1;Name=RUP90605.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119677.1;locus_tag=D8M40_01685;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=RUP90605.1;transl_table=11 RBME01000001.1 Genbank gene 388703 389929 . - . ID=gene-D8M40_01690;Name=D8M40_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01690 RBME01000001.1 Protein Homology CDS 388703 389929 . - 0 ID=cds-RUP90606.1;Parent=gene-D8M40_01690;Dbxref=NCBI_GP:RUP90606.1;Name=RUP90606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00570.21%2CHMM:PF01612.18;locus_tag=D8M40_01690;product=ribonuclease D;protein_id=RUP90606.1;transl_table=11 RBME01000001.1 Genbank gene 389948 390580 . - . ID=gene-D8M40_01695;Name=D8M40_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01695 RBME01000001.1 Protein Homology CDS 389948 390580 . - 0 ID=cds-RUP90806.1;Parent=gene-D8M40_01695;Dbxref=NCBI_GP:RUP90806.1;Name=RUP90806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325015.1;locus_tag=D8M40_01695;product=DUF3000 domain-containing protein;protein_id=RUP90806.1;transl_table=11 RBME01000001.1 Genbank gene 390777 391511 . + . ID=gene-D8M40_01700;Name=D8M40_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01700 RBME01000001.1 Protein Homology CDS 390777 391511 . + 0 ID=cds-RUP90607.1;Parent=gene-D8M40_01700;Dbxref=NCBI_GP:RUP90607.1;Name=RUP90607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119674.1;locus_tag=D8M40_01700;product=hypothetical protein;protein_id=RUP90607.1;transl_table=11 RBME01000001.1 Genbank gene 391630 392031 . - . ID=gene-D8M40_01705;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=D8M40_01705 RBME01000001.1 Protein Homology CDS 391630 392031 . - 0 ID=cds-RUP90608.1;Parent=gene-D8M40_01705;Dbxref=NCBI_GP:RUP90608.1;Name=RUP90608.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190201.1;locus_tag=D8M40_01705;product=peptide-methionine (R)-S-oxide reductase;protein_id=RUP90608.1;transl_table=11 RBME01000001.1 Genbank gene 392110 393387 . - . ID=gene-D8M40_01710;Name=D8M40_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01710 RBME01000001.1 Protein Homology CDS 392110 393387 . - 0 ID=cds-RUP90609.1;Parent=gene-D8M40_01710;Dbxref=NCBI_GP:RUP90609.1;Name=RUP90609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119672.1;locus_tag=D8M40_01710;product=DUF2029 domain-containing protein;protein_id=RUP90609.1;transl_table=11 RBME01000001.1 Genbank gene 393368 394075 . - . ID=gene-D8M40_01715;Name=D8M40_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01715 RBME01000001.1 Protein Homology CDS 393368 394075 . - 0 ID=cds-RUP90610.1;Parent=gene-D8M40_01715;Dbxref=NCBI_GP:RUP90610.1;Name=RUP90610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01872.15;locus_tag=D8M40_01715;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=RUP90610.1;transl_table=11 RBME01000001.1 Genbank gene 394210 394282 . + . ID=gene-D8M40_01720;Name=D8M40_01720;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01720 RBME01000001.1 tRNAscan-SE tRNA 394210 394282 . + . ID=rna-D8M40_01720;Parent=gene-D8M40_01720;anticodon=(pos:394243..394245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01720;product=tRNA-Gly RBME01000001.1 tRNAscan-SE exon 394210 394282 . + . ID=exon-D8M40_01720-1;Parent=rna-D8M40_01720;anticodon=(pos:394243..394245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01720;product=tRNA-Gly RBME01000001.1 Genbank gene 394362 394434 . + . ID=gene-D8M40_01725;Name=D8M40_01725;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01725 RBME01000001.1 tRNAscan-SE tRNA 394362 394434 . + . ID=rna-D8M40_01725;Parent=gene-D8M40_01725;anticodon=(pos:394395..394397);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01725;product=tRNA-Val RBME01000001.1 tRNAscan-SE exon 394362 394434 . + . ID=exon-D8M40_01725-1;Parent=rna-D8M40_01725;anticodon=(pos:394395..394397);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01725;product=tRNA-Val RBME01000001.1 Genbank gene 394465 394537 . + . ID=gene-D8M40_01730;Name=D8M40_01730;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01730 RBME01000001.1 tRNAscan-SE tRNA 394465 394537 . + . ID=rna-D8M40_01730;Parent=gene-D8M40_01730;anticodon=(pos:394498..394500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01730;product=tRNA-Gly RBME01000001.1 tRNAscan-SE exon 394465 394537 . + . ID=exon-D8M40_01730-1;Parent=rna-D8M40_01730;anticodon=(pos:394498..394500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01730;product=tRNA-Gly RBME01000001.1 Genbank gene 394582 394655 . + . ID=gene-D8M40_01735;Name=D8M40_01735;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01735 RBME01000001.1 tRNAscan-SE tRNA 394582 394655 . + . ID=rna-D8M40_01735;Parent=gene-D8M40_01735;anticodon=(pos:394614..394616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01735;product=tRNA-Cys RBME01000001.1 tRNAscan-SE exon 394582 394655 . + . ID=exon-D8M40_01735-1;Parent=rna-D8M40_01735;anticodon=(pos:394614..394616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01735;product=tRNA-Cys RBME01000001.1 Genbank gene 394684 394756 . + . ID=gene-D8M40_01740;Name=D8M40_01740;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01740 RBME01000001.1 tRNAscan-SE tRNA 394684 394756 . + . ID=rna-D8M40_01740;Parent=gene-D8M40_01740;anticodon=(pos:394717..394719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01740;product=tRNA-Val RBME01000001.1 tRNAscan-SE exon 394684 394756 . + . ID=exon-D8M40_01740-1;Parent=rna-D8M40_01740;anticodon=(pos:394717..394719);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01740;product=tRNA-Val RBME01000001.1 Genbank gene 394819 394894 . + . ID=gene-D8M40_01745;Name=D8M40_01745;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_01745 RBME01000001.1 tRNAscan-SE tRNA 394819 394894 . + . ID=rna-D8M40_01745;Parent=gene-D8M40_01745;anticodon=(pos:394852..394854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01745;product=tRNA-Gly RBME01000001.1 tRNAscan-SE exon 394819 394894 . + . ID=exon-D8M40_01745-1;Parent=rna-D8M40_01745;anticodon=(pos:394852..394854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_01745;product=tRNA-Gly RBME01000001.1 Genbank pseudogene 395041 396220 . - . ID=gene-D8M40_01750;Name=D8M40_01750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_01750;pseudo=true RBME01000001.1 Protein Homology CDS 395041 396220 . - 0 ID=cds-D8M40_01750;Parent=gene-D8M40_01750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040355768.1;locus_tag=D8M40_01750;product=IS1249 family transposase;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 396594 397202 . + . ID=gene-D8M40_01755;Name=D8M40_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01755 RBME01000001.1 Protein Homology CDS 396594 397202 . + 0 ID=cds-RUP90611.1;Parent=gene-D8M40_01755;Dbxref=NCBI_GP:RUP90611.1;Name=RUP90611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855865.1;locus_tag=D8M40_01755;product=copper resistance protein CopC;protein_id=RUP90611.1;transl_table=11 RBME01000001.1 Genbank gene 397232 397861 . + . ID=gene-D8M40_01760;Name=D8M40_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01760 RBME01000001.1 Protein Homology CDS 397232 397861 . + 0 ID=cds-RUP90612.1;Parent=gene-D8M40_01760;Dbxref=NCBI_GP:RUP90612.1;Name=RUP90612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119669.1;locus_tag=D8M40_01760;product=copper chaperone PCu(A)C;protein_id=RUP90612.1;transl_table=11 RBME01000001.1 Genbank gene 398112 399239 . + . ID=gene-D8M40_01765;Name=D8M40_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01765 RBME01000001.1 Protein Homology CDS 398112 399239 . + 0 ID=cds-RUP90613.1;Parent=gene-D8M40_01765;Dbxref=NCBI_GP:RUP90613.1;Name=RUP90613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063548.1;locus_tag=D8M40_01765;product=Dyp-type peroxidase;protein_id=RUP90613.1;transl_table=11 RBME01000001.1 Genbank gene 399408 401465 . + . ID=gene-D8M40_01770;Name=D8M40_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01770 RBME01000001.1 Protein Homology CDS 399408 401465 . + 0 ID=cds-RUP90614.1;Parent=gene-D8M40_01770;Dbxref=NCBI_GP:RUP90614.1;Name=RUP90614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119667.1;locus_tag=D8M40_01770;product=threonine--tRNA ligase;protein_id=RUP90614.1;transl_table=11 RBME01000001.1 Genbank gene 401455 402036 . + . ID=gene-D8M40_01775;Name=D8M40_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01775 RBME01000001.1 Protein Homology CDS 401455 402036 . + 0 ID=cds-RUP90615.1;Parent=gene-D8M40_01775;Dbxref=NCBI_GP:RUP90615.1;Name=RUP90615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119666.1;locus_tag=D8M40_01775;product=HIT domain-containing protein;protein_id=RUP90615.1;transl_table=11 RBME01000001.1 Genbank gene 402029 402652 . + . ID=gene-D8M40_01780;Name=D8M40_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01780 RBME01000001.1 Protein Homology CDS 402029 402652 . + 0 ID=cds-RUP90616.1;Parent=gene-D8M40_01780;Dbxref=NCBI_GP:RUP90616.1;Name=RUP90616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600881.1;locus_tag=D8M40_01780;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=RUP90616.1;transl_table=11 RBME01000001.1 Genbank gene 402649 403626 . + . ID=gene-D8M40_01785;Name=D8M40_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01785 RBME01000001.1 Protein Homology CDS 402649 403626 . + 0 ID=cds-RUP90617.1;Parent=gene-D8M40_01785;Dbxref=NCBI_GP:RUP90617.1;Name=RUP90617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119664.1;locus_tag=D8M40_01785;product=phosphatidylinositol mannoside acyltransferase;protein_id=RUP90617.1;transl_table=11 RBME01000001.1 Genbank gene 403638 404738 . + . ID=gene-D8M40_01790;Name=D8M40_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01790 RBME01000001.1 Protein Homology CDS 403638 404738 . + 0 ID=cds-RUP90618.1;Parent=gene-D8M40_01790;Dbxref=NCBI_GP:RUP90618.1;Name=RUP90618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278983.1;locus_tag=D8M40_01790;product=glycosyltransferase family 1 protein;protein_id=RUP90618.1;transl_table=11 RBME01000001.1 Genbank gene 404735 405259 . + . ID=gene-D8M40_01795;Name=D8M40_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01795 RBME01000001.1 Protein Homology CDS 404735 405259 . + 0 ID=cds-RUP90619.1;Parent=gene-D8M40_01795;Dbxref=NCBI_GP:RUP90619.1;Name=RUP90619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119662.1;locus_tag=D8M40_01795;product=hypothetical protein;protein_id=RUP90619.1;transl_table=11 RBME01000001.1 Genbank gene 405278 405754 . - . ID=gene-D8M40_01800;Name=D8M40_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01800 RBME01000001.1 Protein Homology CDS 405278 405754 . - 0 ID=cds-RUP90620.1;Parent=gene-D8M40_01800;Dbxref=NCBI_GP:RUP90620.1;Name=RUP90620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119661.1;locus_tag=D8M40_01800;product=DUF3817 domain-containing protein;protein_id=RUP90620.1;transl_table=11 RBME01000001.1 Genbank gene 405883 406818 . + . ID=gene-D8M40_01805;Name=D8M40_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01805 RBME01000001.1 Protein Homology CDS 405883 406818 . + 0 ID=cds-RUP90621.1;Parent=gene-D8M40_01805;Dbxref=NCBI_GP:RUP90621.1;Name=RUP90621.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13622.4;locus_tag=D8M40_01805;product=acyl-CoA thioesterase II;protein_id=RUP90621.1;transl_table=11 RBME01000001.1 Genbank gene 406982 407737 . + . ID=gene-D8M40_01810;Name=D8M40_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01810 RBME01000001.1 Protein Homology CDS 406982 407737 . + 0 ID=cds-RUP90622.1;Parent=gene-D8M40_01810;Dbxref=NCBI_GP:RUP90622.1;Name=RUP90622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278990.1;locus_tag=D8M40_01810;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=RUP90622.1;transl_table=11 RBME01000001.1 Genbank gene 407759 408298 . + . ID=gene-D8M40_01815;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=D8M40_01815 RBME01000001.1 Protein Homology CDS 407759 408298 . + 0 ID=cds-RUP90623.1;Parent=gene-D8M40_01815;Dbxref=NCBI_GP:RUP90623.1;Name=RUP90623.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119658.1;locus_tag=D8M40_01815;product=crossover junction endodeoxyribonuclease RuvC;protein_id=RUP90623.1;transl_table=11 RBME01000001.1 Genbank gene 408302 408934 . + . ID=gene-D8M40_01820;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=D8M40_01820 RBME01000001.1 Protein Homology CDS 408302 408934 . + 0 ID=cds-RUP90624.1;Parent=gene-D8M40_01820;Dbxref=NCBI_GP:RUP90624.1;Name=RUP90624.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190175.1;locus_tag=D8M40_01820;product=Holliday junction branch migration protein RuvA;protein_id=RUP90624.1;transl_table=11 RBME01000001.1 Genbank gene 408956 410074 . + . ID=gene-D8M40_01825;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=D8M40_01825 RBME01000001.1 Protein Homology CDS 408956 410074 . + 0 ID=cds-RUP90625.1;Parent=gene-D8M40_01825;Dbxref=NCBI_GP:RUP90625.1;Name=RUP90625.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119656.1;locus_tag=D8M40_01825;product=Holliday junction branch migration DNA helicase RuvB;protein_id=RUP90625.1;transl_table=11 RBME01000001.1 Genbank gene 410187 410597 . + . ID=gene-D8M40_01830;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=D8M40_01830 RBME01000001.1 Protein Homology CDS 410187 410597 . + 0 ID=cds-RUP90626.1;Parent=gene-D8M40_01830;Dbxref=NCBI_GP:RUP90626.1;Name=RUP90626.1;gbkey=CDS;gene=yajC;inference=COORDINATES: protein motif:HMM:TIGR00739;locus_tag=D8M40_01830;product=preprotein translocase subunit YajC;protein_id=RUP90626.1;transl_table=11 RBME01000001.1 Genbank gene 410662 412470 . + . ID=gene-D8M40_01835;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=D8M40_01835 RBME01000001.1 Protein Homology CDS 410662 412470 . + 0 ID=cds-RUP90627.1;Parent=gene-D8M40_01835;Dbxref=NCBI_GP:RUP90627.1;Name=RUP90627.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119654.1;locus_tag=D8M40_01835;product=protein translocase subunit SecD;protein_id=RUP90627.1;transl_table=11 RBME01000001.1 Genbank gene 412463 413605 . + . ID=gene-D8M40_01840;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=D8M40_01840 RBME01000001.1 Protein Homology CDS 412463 413605 . + 0 ID=cds-RUP90628.1;Parent=gene-D8M40_01840;Dbxref=NCBI_GP:RUP90628.1;Name=RUP90628.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119653.1;locus_tag=D8M40_01840;product=protein translocase subunit SecF;protein_id=RUP90628.1;transl_table=11 RBME01000001.1 Genbank gene 413711 415444 . + . ID=gene-D8M40_01845;Name=D8M40_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01845 RBME01000001.1 Protein Homology CDS 413711 415444 . + 0 ID=cds-RUP90629.1;Parent=gene-D8M40_01845;Dbxref=NCBI_GP:RUP90629.1;Name=RUP90629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582075.1;locus_tag=D8M40_01845;product=peptide ABC transporter;protein_id=RUP90629.1;transl_table=11 RBME01000001.1 Genbank gene 415512 416078 . + . ID=gene-D8M40_01850;Name=D8M40_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01850 RBME01000001.1 Protein Homology CDS 415512 416078 . + 0 ID=cds-RUP90630.1;Parent=gene-D8M40_01850;Dbxref=NCBI_GP:RUP90630.1;Name=RUP90630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600867.1;locus_tag=D8M40_01850;product=adenine phosphoribosyltransferase;protein_id=RUP90630.1;transl_table=11 RBME01000001.1 Genbank gene 416096 418387 . + . ID=gene-D8M40_01855;Name=D8M40_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01855 RBME01000001.1 Protein Homology CDS 416096 418387 . + 0 ID=cds-RUP90631.1;Parent=gene-D8M40_01855;Dbxref=NCBI_GP:RUP90631.1;Name=RUP90631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600866.1;locus_tag=D8M40_01855;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=RUP90631.1;transl_table=11 RBME01000001.1 Genbank gene 418543 418911 . - . ID=gene-D8M40_01860;Name=D8M40_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01860 RBME01000001.1 GeneMarkS+ CDS 418543 418911 . - 0 ID=cds-RUP90632.1;Parent=gene-D8M40_01860;Dbxref=NCBI_GP:RUP90632.1;Name=RUP90632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_01860;product=hypothetical protein;protein_id=RUP90632.1;transl_table=11 RBME01000001.1 Genbank gene 418993 419859 . - . ID=gene-D8M40_01865;Name=D8M40_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01865 RBME01000001.1 Protein Homology CDS 418993 419859 . - 0 ID=cds-RUP90633.1;Parent=gene-D8M40_01865;Dbxref=NCBI_GP:RUP90633.1;Name=RUP90633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014525860.1;locus_tag=D8M40_01865;product=peptidylprolyl isomerase;protein_id=RUP90633.1;transl_table=11 RBME01000001.1 Genbank gene 420041 420541 . + . ID=gene-D8M40_01870;Name=D8M40_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01870 RBME01000001.1 Protein Homology CDS 420041 420541 . + 0 ID=cds-RUP90807.1;Parent=gene-D8M40_01870;Dbxref=NCBI_GP:RUP90807.1;Name=RUP90807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851706.1;locus_tag=D8M40_01870;product=thiol peroxidase;protein_id=RUP90807.1;transl_table=11 RBME01000001.1 Genbank gene 420601 421272 . + . ID=gene-D8M40_01875;Name=D8M40_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01875 RBME01000001.1 Protein Homology CDS 420601 421272 . + 0 ID=cds-RUP90634.1;Parent=gene-D8M40_01875;Dbxref=NCBI_GP:RUP90634.1;Name=RUP90634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328505.1;locus_tag=D8M40_01875;product=MBL fold metallo-hydrolase;protein_id=RUP90634.1;transl_table=11 RBME01000001.1 Genbank gene 421284 422558 . + . ID=gene-D8M40_01880;Name=D8M40_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01880 RBME01000001.1 Protein Homology CDS 421284 422558 . + 0 ID=cds-RUP90635.1;Parent=gene-D8M40_01880;Dbxref=NCBI_GP:RUP90635.1;Name=RUP90635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190154.1;locus_tag=D8M40_01880;product=histidine--tRNA ligase;protein_id=RUP90635.1;transl_table=11 RBME01000001.1 Genbank gene 422555 423964 . - . ID=gene-D8M40_01885;Name=D8M40_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01885 RBME01000001.1 Protein Homology CDS 422555 423964 . - 0 ID=cds-RUP90636.1;Parent=gene-D8M40_01885;Dbxref=NCBI_GP:RUP90636.1;Name=RUP90636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190153.1;locus_tag=D8M40_01885;product=L-serine ammonia-lyase;protein_id=RUP90636.1;transl_table=11 RBME01000001.1 Genbank gene 424349 426187 . + . ID=gene-D8M40_01890;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=D8M40_01890 RBME01000001.1 Protein Homology CDS 424349 426187 . + 0 ID=cds-RUP90808.1;Parent=gene-D8M40_01890;Dbxref=NCBI_GP:RUP90808.1;Name=RUP90808.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582060.1;locus_tag=D8M40_01890;product=aspartate--tRNA ligase;protein_id=RUP90808.1;transl_table=11 RBME01000001.1 Genbank gene 426273 427484 . + . ID=gene-D8M40_01895;Name=D8M40_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01895 RBME01000001.1 Protein Homology CDS 426273 427484 . + 0 ID=cds-RUP90637.1;Parent=gene-D8M40_01895;Dbxref=NCBI_GP:RUP90637.1;Name=RUP90637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015439499.1;locus_tag=D8M40_01895;product=phosphotransferase;protein_id=RUP90637.1;transl_table=11 RBME01000001.1 Genbank gene 427565 428905 . + . ID=gene-D8M40_01900;Name=D8M40_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01900 RBME01000001.1 Protein Homology CDS 427565 428905 . + 0 ID=cds-RUP90809.1;Parent=gene-D8M40_01900;Dbxref=NCBI_GP:RUP90809.1;Name=RUP90809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018016965.1;locus_tag=D8M40_01900;product=replication-associated recombination protein A;protein_id=RUP90809.1;transl_table=11 RBME01000001.1 Genbank gene 429038 431710 . + . ID=gene-D8M40_01905;Name=D8M40_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01905 RBME01000001.1 Protein Homology CDS 429038 431710 . + 0 ID=cds-RUP90638.1;Parent=gene-D8M40_01905;Dbxref=NCBI_GP:RUP90638.1;Name=RUP90638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119640.1;locus_tag=D8M40_01905;product=alanine--tRNA ligase;protein_id=RUP90638.1;transl_table=11 RBME01000001.1 Genbank gene 431853 432410 . + . ID=gene-D8M40_01910;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=D8M40_01910 RBME01000001.1 Protein Homology CDS 431853 432410 . + 0 ID=cds-RUP90810.1;Parent=gene-D8M40_01910;Dbxref=NCBI_GP:RUP90810.1;Name=RUP90810.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242004.1;locus_tag=D8M40_01910;product=Holliday junction resolvase RuvX;protein_id=RUP90810.1;transl_table=11 RBME01000001.1 Genbank gene 432436 433635 . + . ID=gene-D8M40_01915;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=D8M40_01915 RBME01000001.1 Protein Homology CDS 432436 433635 . + 0 ID=cds-RUP90639.1;Parent=gene-D8M40_01915;Dbxref=NCBI_GP:RUP90639.1;Name=RUP90639.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119638.1;locus_tag=D8M40_01915;product=endolytic transglycosylase MltG;protein_id=RUP90639.1;transl_table=11 RBME01000001.1 Genbank gene 433700 434512 . + . ID=gene-D8M40_01920;Name=D8M40_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01920 RBME01000001.1 Protein Homology CDS 433700 434512 . + 0 ID=cds-RUP90811.1;Parent=gene-D8M40_01920;Dbxref=NCBI_GP:RUP90811.1;Name=RUP90811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295609.1;locus_tag=D8M40_01920;product=shikimate dehydrogenase;protein_id=RUP90811.1;transl_table=11 RBME01000001.1 Genbank gene 434611 435066 . + . ID=gene-D8M40_01925;Name=D8M40_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01925 RBME01000001.1 Protein Homology CDS 434611 435066 . + 0 ID=cds-RUP90640.1;Parent=gene-D8M40_01925;Dbxref=NCBI_GP:RUP90640.1;Name=RUP90640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190138.1;locus_tag=D8M40_01925;product=prepilin peptidase;protein_id=RUP90640.1;transl_table=11 RBME01000001.1 Genbank gene 435075 436310 . + . ID=gene-D8M40_01930;Name=D8M40_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01930 RBME01000001.1 Protein Homology CDS 435075 436310 . + 0 ID=cds-RUP90641.1;Parent=gene-D8M40_01930;Dbxref=NCBI_GP:RUP90641.1;Name=RUP90641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119635.1;locus_tag=D8M40_01930;product=chorismate synthase;protein_id=RUP90641.1;transl_table=11 RBME01000001.1 Genbank gene 436310 436843 . + . ID=gene-D8M40_01935;Name=D8M40_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01935 RBME01000001.1 Protein Homology CDS 436310 436843 . + 0 ID=cds-RUP90642.1;Parent=gene-D8M40_01935;Dbxref=NCBI_GP:RUP90642.1;Name=RUP90642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119634.1;locus_tag=D8M40_01935;product=shikimate kinase;protein_id=RUP90642.1;transl_table=11 RBME01000001.1 Genbank gene 436891 438006 . + . ID=gene-D8M40_01940;Name=D8M40_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01940 RBME01000001.1 Protein Homology CDS 436891 438006 . + 0 ID=cds-RUP90812.1;Parent=gene-D8M40_01940;Dbxref=NCBI_GP:RUP90812.1;Name=RUP90812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836456.1;locus_tag=D8M40_01940;product=3-dehydroquinate synthase;protein_id=RUP90812.1;transl_table=11 RBME01000001.1 Genbank gene 438065 438520 . + . ID=gene-D8M40_01945;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=D8M40_01945 RBME01000001.1 Protein Homology CDS 438065 438520 . + 0 ID=cds-RUP90643.1;Parent=gene-D8M40_01945;Dbxref=NCBI_GP:RUP90643.1;Name=RUP90643.1;gbkey=CDS;gene=aroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119632.1;locus_tag=D8M40_01945;product=type II 3-dehydroquinate dehydratase;protein_id=RUP90643.1;transl_table=11 RBME01000001.1 Genbank gene 438633 439724 . + . ID=gene-D8M40_01950;Name=D8M40_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01950 RBME01000001.1 Protein Homology CDS 438633 439724 . + 0 ID=cds-RUP90644.1;Parent=gene-D8M40_01950;Dbxref=NCBI_GP:RUP90644.1;Name=RUP90644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119631.1;locus_tag=D8M40_01950;product=aminopeptidase P family protein;protein_id=RUP90644.1;transl_table=11 RBME01000001.1 Genbank gene 439928 440491 . + . ID=gene-D8M40_01955;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=D8M40_01955 RBME01000001.1 Protein Homology CDS 439928 440491 . + 0 ID=cds-RUP90645.1;Parent=gene-D8M40_01955;Dbxref=NCBI_GP:RUP90645.1;Name=RUP90645.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600833.1;locus_tag=D8M40_01955;product=elongation factor P;protein_id=RUP90645.1;transl_table=11 RBME01000001.1 Genbank gene 440503 441096 . + . ID=gene-D8M40_01960;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=D8M40_01960 RBME01000001.1 Protein Homology CDS 440503 441096 . + 0 ID=cds-RUP90646.1;Parent=gene-D8M40_01960;Dbxref=NCBI_GP:RUP90646.1;Name=RUP90646.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119629.1;locus_tag=D8M40_01960;product=transcription antitermination factor NusB;protein_id=RUP90646.1;transl_table=11 RBME01000001.1 Genbank gene 441102 441953 . + . ID=gene-D8M40_01965;Name=D8M40_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01965 RBME01000001.1 Protein Homology CDS 441102 441953 . + 0 ID=cds-RUP90647.1;Parent=gene-D8M40_01965;Dbxref=NCBI_GP:RUP90647.1;Name=RUP90647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845709.1;locus_tag=D8M40_01965;product=PPK2 family polyphosphate--nucleotide phosphotransferase;protein_id=RUP90647.1;transl_table=11 RBME01000001.1 Genbank gene 442046 442546 . - . ID=gene-D8M40_01970;Name=D8M40_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01970 RBME01000001.1 Protein Homology CDS 442046 442546 . - 0 ID=cds-RUP90648.1;Parent=gene-D8M40_01970;Dbxref=NCBI_GP:RUP90648.1;Name=RUP90648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119627.1;locus_tag=D8M40_01970;product=hypothetical protein;protein_id=RUP90648.1;transl_table=11 RBME01000001.1 Genbank gene 442556 443080 . - . ID=gene-D8M40_01975;Name=D8M40_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01975 RBME01000001.1 Protein Homology CDS 442556 443080 . - 0 ID=cds-RUP90649.1;Parent=gene-D8M40_01975;Dbxref=NCBI_GP:RUP90649.1;Name=RUP90649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283185.1;locus_tag=D8M40_01975;product=YbjN domain-containing protein;protein_id=RUP90649.1;transl_table=11 RBME01000001.1 Genbank gene 443202 444608 . - . ID=gene-D8M40_01980;Name=D8M40_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01980 RBME01000001.1 Protein Homology CDS 443202 444608 . - 0 ID=cds-RUP90650.1;Parent=gene-D8M40_01980;Dbxref=NCBI_GP:RUP90650.1;Name=RUP90650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119625.1;locus_tag=D8M40_01980;product=TIGR01777 family protein;protein_id=RUP90650.1;transl_table=11 RBME01000001.1 Genbank gene 444719 445423 . + . ID=gene-D8M40_01985;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=D8M40_01985 RBME01000001.1 Protein Homology CDS 444719 445423 . + 0 ID=cds-RUP90651.1;Parent=gene-D8M40_01985;Dbxref=NCBI_GP:RUP90651.1;Name=RUP90651.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119624.1;locus_tag=D8M40_01985;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=RUP90651.1;transl_table=11 RBME01000001.1 Genbank gene 445423 446358 . + . ID=gene-D8M40_01990;Name=D8M40_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01990 RBME01000001.1 Protein Homology CDS 445423 446358 . + 0 ID=cds-RUP90652.1;Parent=gene-D8M40_01990;Dbxref=NCBI_GP:RUP90652.1;Name=RUP90652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119623.1;locus_tag=D8M40_01990;product=aspartate carbamoyltransferase catalytic subunit;protein_id=RUP90652.1;transl_table=11 RBME01000001.1 Genbank gene 446437 447846 . + . ID=gene-D8M40_01995;Name=D8M40_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_01995 RBME01000001.1 Protein Homology CDS 446437 447846 . + 0 ID=cds-RUP90813.1;Parent=gene-D8M40_01995;Dbxref=NCBI_GP:RUP90813.1;Name=RUP90813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328467.1;locus_tag=D8M40_01995;product=dihydroorotase;protein_id=RUP90813.1;transl_table=11 RBME01000001.1 Genbank gene 447905 449113 . + . ID=gene-D8M40_02000;Name=D8M40_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02000 RBME01000001.1 Protein Homology CDS 447905 449113 . + 0 ID=cds-RUP90653.1;Parent=gene-D8M40_02000;Dbxref=NCBI_GP:RUP90653.1;Name=RUP90653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119621.1;locus_tag=D8M40_02000;product=carbamoyl-phosphate synthase small subunit;protein_id=RUP90653.1;transl_table=11 RBME01000001.1 Genbank gene 449116 452451 . + . ID=gene-D8M40_02005;Name=D8M40_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02005 RBME01000001.1 Protein Homology CDS 449116 452451 . + 0 ID=cds-RUP90654.1;Parent=gene-D8M40_02005;Dbxref=NCBI_GP:RUP90654.1;Name=RUP90654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119620.1;locus_tag=D8M40_02005;product=carbamoyl-phosphate synthase large subunit;protein_id=RUP90654.1;transl_table=11 RBME01000001.1 Genbank gene 452441 453286 . + . ID=gene-D8M40_02010;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=D8M40_02010 RBME01000001.1 Protein Homology CDS 452441 453286 . + 0 ID=cds-RUP90655.1;Parent=gene-D8M40_02010;Dbxref=NCBI_GP:RUP90655.1;Name=RUP90655.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119619.1;locus_tag=D8M40_02010;product=orotidine-5'-phosphate decarboxylase;protein_id=RUP90655.1;transl_table=11 RBME01000001.1 Genbank gene 453560 453883 . + . ID=gene-D8M40_02015;Name=D8M40_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02015 RBME01000001.1 Protein Homology CDS 453560 453883 . + 0 ID=cds-RUP90656.1;Parent=gene-D8M40_02015;Dbxref=NCBI_GP:RUP90656.1;Name=RUP90656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241984.1;locus_tag=D8M40_02015;product=integration host factor;protein_id=RUP90656.1;transl_table=11 RBME01000001.1 Genbank gene 453889 454458 . + . ID=gene-D8M40_02020;Name=D8M40_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02020 RBME01000001.1 Protein Homology CDS 453889 454458 . + 0 ID=cds-RUP90657.1;Parent=gene-D8M40_02020;Dbxref=NCBI_GP:RUP90657.1;Name=RUP90657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324892.1;locus_tag=D8M40_02020;product=guanylate kinase;protein_id=RUP90657.1;transl_table=11 RBME01000001.1 Genbank gene 454554 454835 . + . ID=gene-D8M40_02025;Name=D8M40_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02025 RBME01000001.1 Protein Homology CDS 454554 454835 . + 0 ID=cds-RUP90658.1;Parent=gene-D8M40_02025;Dbxref=NCBI_GP:RUP90658.1;Name=RUP90658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400981.1;locus_tag=D8M40_02025;product=DNA-directed RNA polymerase subunit omega;protein_id=RUP90658.1;transl_table=11 RBME01000001.1 Genbank gene 455186 456808 . + . ID=gene-D8M40_02030;Name=D8M40_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02030 RBME01000001.1 Protein Homology CDS 455186 456808 . + 0 ID=cds-RUP90659.1;Parent=gene-D8M40_02030;Dbxref=NCBI_GP:RUP90659.1;Name=RUP90659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00474.15;locus_tag=D8M40_02030;product=sodium:solute symporter family protein;protein_id=RUP90659.1;transl_table=11 RBME01000001.1 Genbank gene 456833 458128 . + . ID=gene-D8M40_02035;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=D8M40_02035 RBME01000001.1 Protein Homology CDS 456833 458128 . + 0 ID=cds-RUP90660.1;Parent=gene-D8M40_02035;Dbxref=NCBI_GP:RUP90660.1;Name=RUP90660.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119613.1;locus_tag=D8M40_02035;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=RUP90660.1;transl_table=11 RBME01000001.1 Genbank gene 458339 459541 . + . ID=gene-D8M40_02040;Name=D8M40_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02040 RBME01000001.1 Protein Homology CDS 458339 459541 . + 0 ID=cds-RUP90814.1;Parent=gene-D8M40_02040;Dbxref=NCBI_GP:RUP90814.1;Name=RUP90814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600817.1;locus_tag=D8M40_02040;product=methionine adenosyltransferase;protein_id=RUP90814.1;transl_table=11 RBME01000001.1 Genbank gene 459559 461565 . + . ID=gene-D8M40_02045;Name=D8M40_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02045 RBME01000001.1 Protein Homology CDS 459559 461565 . + 0 ID=cds-RUP90661.1;Parent=gene-D8M40_02045;Dbxref=NCBI_GP:RUP90661.1;Name=RUP90661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119611.1;locus_tag=D8M40_02045;product=primosomal protein N';protein_id=RUP90661.1;transl_table=11 RBME01000001.1 Genbank gene 461615 462592 . + . ID=gene-D8M40_02050;Name=D8M40_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02050 RBME01000001.1 Protein Homology CDS 461615 462592 . + 0 ID=cds-RUP90662.1;Parent=gene-D8M40_02050;Dbxref=NCBI_GP:RUP90662.1;Name=RUP90662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119610.1;locus_tag=D8M40_02050;product=methionyl-tRNA formyltransferase;protein_id=RUP90662.1;transl_table=11 RBME01000001.1 Genbank gene 462589 464208 . + . ID=gene-D8M40_02055;Name=D8M40_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02055 RBME01000001.1 Protein Homology CDS 462589 464208 . + 0 ID=cds-RUP90663.1;Parent=gene-D8M40_02055;Dbxref=NCBI_GP:RUP90663.1;Name=RUP90663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119609.1;locus_tag=D8M40_02055;product=MFS transporter;protein_id=RUP90663.1;transl_table=11 RBME01000001.1 Genbank gene 464318 464974 . + . ID=gene-D8M40_02060;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=D8M40_02060 RBME01000001.1 Protein Homology CDS 464318 464974 . + 0 ID=cds-RUP90815.1;Parent=gene-D8M40_02060;Dbxref=NCBI_GP:RUP90815.1;Name=RUP90815.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400966.1;locus_tag=D8M40_02060;product=ribulose-phosphate 3-epimerase;protein_id=RUP90815.1;transl_table=11 RBME01000001.1 Genbank gene 464975 466054 . + . ID=gene-D8M40_02065;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=D8M40_02065 RBME01000001.1 Protein Homology CDS 464975 466054 . + 0 ID=cds-RUP90664.1;Parent=gene-D8M40_02065;Dbxref=NCBI_GP:RUP90664.1;Name=RUP90664.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119607.1;locus_tag=D8M40_02065;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=RUP90664.1;transl_table=11 RBME01000001.1 Genbank gene 466068 466796 . + . ID=gene-D8M40_02070;Name=D8M40_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02070 RBME01000001.1 Protein Homology CDS 466068 466796 . + 0 ID=cds-RUP90665.1;Parent=gene-D8M40_02070;Dbxref=NCBI_GP:RUP90665.1;Name=RUP90665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119606.1;locus_tag=D8M40_02070;product=riboflavin synthase;protein_id=RUP90665.1;transl_table=11 RBME01000001.1 Genbank gene 466808 468154 . + . ID=gene-D8M40_02075;Name=D8M40_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02075 RBME01000001.1 Protein Homology CDS 466808 468154 . + 0 ID=cds-RUP90666.1;Parent=gene-D8M40_02075;Dbxref=NCBI_GP:RUP90666.1;Name=RUP90666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119605.1;locus_tag=D8M40_02075;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=RUP90666.1;transl_table=11 RBME01000001.1 Genbank gene 468156 468662 . + . ID=gene-D8M40_02080;Name=D8M40_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02080 RBME01000001.1 Protein Homology CDS 468156 468662 . + 0 ID=cds-RUP90667.1;Parent=gene-D8M40_02080;Dbxref=NCBI_GP:RUP90667.1;Name=RUP90667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119604.1;locus_tag=D8M40_02080;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=RUP90667.1;transl_table=11 RBME01000001.1 Genbank gene 468659 469201 . + . ID=gene-D8M40_02085;Name=D8M40_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02085 RBME01000001.1 Protein Homology CDS 468659 469201 . + 0 ID=cds-RUP90668.1;Parent=gene-D8M40_02085;Dbxref=NCBI_GP:RUP90668.1;Name=RUP90668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119603.1;locus_tag=D8M40_02085;product=PH domain-containing protein;protein_id=RUP90668.1;transl_table=11 RBME01000001.1 Genbank gene 469262 471295 . + . ID=gene-D8M40_02090;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=D8M40_02090 RBME01000001.1 Protein Homology CDS 469262 471295 . + 0 ID=cds-RUP90669.1;Parent=gene-D8M40_02090;Dbxref=NCBI_GP:RUP90669.1;Name=RUP90669.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021713.1;locus_tag=D8M40_02090;product=excinuclease ABC subunit UvrC;protein_id=RUP90669.1;transl_table=11 RBME01000001.1 Genbank gene 471354 472226 . + . ID=gene-D8M40_02095;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=D8M40_02095 RBME01000001.1 Protein Homology CDS 471354 472226 . + 0 ID=cds-RUP90670.1;Parent=gene-D8M40_02095;Dbxref=NCBI_GP:RUP90670.1;Name=RUP90670.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279104.1;locus_tag=D8M40_02095;product=RNase adapter RapZ;protein_id=RUP90670.1;transl_table=11 RBME01000001.1 Genbank gene 472367 473416 . + . ID=gene-D8M40_02100;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=D8M40_02100 RBME01000001.1 Protein Homology CDS 472367 473416 . + 0 ID=cds-RUP90671.1;Parent=gene-D8M40_02100;Dbxref=NCBI_GP:RUP90671.1;Name=RUP90671.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119600.1;locus_tag=D8M40_02100;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=RUP90671.1;transl_table=11 RBME01000001.1 Genbank gene 473505 474542 . + . ID=gene-D8M40_02105;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=D8M40_02105 RBME01000001.1 Protein Homology CDS 473505 474542 . + 0 ID=cds-RUP90672.1;Parent=gene-D8M40_02105;Dbxref=NCBI_GP:RUP90672.1;Name=RUP90672.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823746.1;locus_tag=D8M40_02105;product=DNA-binding protein WhiA;protein_id=RUP90672.1;transl_table=11 RBME01000001.1 Genbank gene 474597 475610 . + . ID=gene-D8M40_02110;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=D8M40_02110 RBME01000001.1 Protein Homology CDS 474597 475610 . + 0 ID=cds-RUP90673.1;Parent=gene-D8M40_02110;Dbxref=NCBI_GP:RUP90673.1;Name=RUP90673.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012878320.1;locus_tag=D8M40_02110;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=RUP90673.1;transl_table=11 RBME01000001.1 Genbank gene 475706 476920 . + . ID=gene-D8M40_02115;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=D8M40_02115 RBME01000001.1 Protein Homology CDS 475706 476920 . + 0 ID=cds-RUP90674.1;Parent=gene-D8M40_02115;Dbxref=NCBI_GP:RUP90674.1;Name=RUP90674.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119597.1;locus_tag=D8M40_02115;product=phosphoglycerate kinase;protein_id=RUP90674.1;transl_table=11 RBME01000001.1 Genbank gene 476968 477747 . + . ID=gene-D8M40_02120;Name=D8M40_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02120 RBME01000001.1 Protein Homology CDS 476968 477747 . + 0 ID=cds-RUP90675.1;Parent=gene-D8M40_02120;Dbxref=NCBI_GP:RUP90675.1;Name=RUP90675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021707.1;locus_tag=D8M40_02120;product=triose-phosphate isomerase;protein_id=RUP90675.1;transl_table=11 RBME01000001.1 Genbank gene 477833 478069 . + . ID=gene-D8M40_02125;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=D8M40_02125 RBME01000001.1 Protein Homology CDS 477833 478069 . + 0 ID=cds-RUP90676.1;Parent=gene-D8M40_02125;Dbxref=NCBI_GP:RUP90676.1;Name=RUP90676.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531608.1;locus_tag=D8M40_02125;product=preprotein translocase subunit SecG;protein_id=RUP90676.1;transl_table=11 RBME01000001.1 Genbank gene 478210 478932 . - . ID=gene-D8M40_02130;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=D8M40_02130 RBME01000001.1 Protein Homology CDS 478210 478932 . - 0 ID=cds-RUP90677.1;Parent=gene-D8M40_02130;Dbxref=NCBI_GP:RUP90677.1;Name=RUP90677.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328413.1;locus_tag=D8M40_02130;product=6-phosphogluconolactonase;protein_id=RUP90677.1;transl_table=11 RBME01000001.1 Genbank gene 478932 479837 . - . ID=gene-D8M40_02135;Name=D8M40_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02135 RBME01000001.1 Protein Homology CDS 478932 479837 . - 0 ID=cds-RUP90678.1;Parent=gene-D8M40_02135;Dbxref=NCBI_GP:RUP90678.1;Name=RUP90678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119593.1;locus_tag=D8M40_02135;product=oxppcycle protein OpcA;protein_id=RUP90678.1;transl_table=11 RBME01000001.1 Genbank gene 479880 481406 . - . ID=gene-D8M40_02140;Name=D8M40_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02140 RBME01000001.1 Protein Homology CDS 479880 481406 . - 0 ID=cds-RUP90679.1;Parent=gene-D8M40_02140;Dbxref=NCBI_GP:RUP90679.1;Name=RUP90679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823739.1;locus_tag=D8M40_02140;product=glucose-6-phosphate dehydrogenase;protein_id=RUP90679.1;transl_table=11 RBME01000001.1 Genbank gene 481488 484760 . - . ID=gene-D8M40_02145;Name=D8M40_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02145 RBME01000001.1 Protein Homology CDS 481488 484760 . - 0 ID=cds-RUP90680.1;Parent=gene-D8M40_02145;Dbxref=NCBI_GP:RUP90680.1;Name=RUP90680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119591.1;locus_tag=D8M40_02145;product=transketolase;protein_id=RUP90680.1;transl_table=11 RBME01000001.1 Genbank gene 485067 485984 . + . ID=gene-D8M40_02150;Name=D8M40_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02150 RBME01000001.1 Protein Homology CDS 485067 485984 . + 0 ID=cds-RUP90816.1;Parent=gene-D8M40_02150;Dbxref=NCBI_GP:RUP90816.1;Name=RUP90816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295558.1;locus_tag=D8M40_02150;product=protoheme IX farnesyltransferase;protein_id=RUP90816.1;transl_table=11 RBME01000001.1 Genbank gene 486010 486987 . - . ID=gene-D8M40_02155;Name=D8M40_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02155 RBME01000001.1 Protein Homology CDS 486010 486987 . - 0 ID=cds-RUP90681.1;Parent=gene-D8M40_02155;Dbxref=NCBI_GP:RUP90681.1;Name=RUP90681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324846.1;locus_tag=D8M40_02155;product=quinone oxidoreductase;protein_id=RUP90681.1;transl_table=11 RBME01000001.1 Genbank gene 487024 487986 . - . ID=gene-D8M40_02160;Name=D8M40_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02160 RBME01000001.1 Protein Homology CDS 487024 487986 . - 0 ID=cds-RUP90682.1;Parent=gene-D8M40_02160;Dbxref=NCBI_GP:RUP90682.1;Name=RUP90682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017019.1;locus_tag=D8M40_02160;product=heme A synthase;protein_id=RUP90682.1;transl_table=11 RBME01000001.1 Genbank gene 488065 488826 . - . ID=gene-D8M40_02165;Name=D8M40_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02165 RBME01000001.1 Protein Homology CDS 488065 488826 . - 0 ID=cds-RUP90683.1;Parent=gene-D8M40_02165;Dbxref=NCBI_GP:RUP90683.1;Name=RUP90683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118865.1;locus_tag=D8M40_02165;product=multidrug ABC transporter permease;protein_id=RUP90683.1;transl_table=11 RBME01000001.1 Genbank gene 488819 489781 . - . ID=gene-D8M40_02170;Name=D8M40_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02170 RBME01000001.1 Protein Homology CDS 488819 489781 . - 0 ID=cds-RUP90684.1;Parent=gene-D8M40_02170;Dbxref=NCBI_GP:RUP90684.1;Name=RUP90684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119586.1;locus_tag=D8M40_02170;product=ABC transporter ATP-binding protein;protein_id=RUP90684.1;transl_table=11 RBME01000001.1 Genbank gene 489778 491439 . - . ID=gene-D8M40_02175;Name=D8M40_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02175 RBME01000001.1 Protein Homology CDS 489778 491439 . - 0 ID=cds-RUP90685.1;Parent=gene-D8M40_02175;Dbxref=NCBI_GP:RUP90685.1;Name=RUP90685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119585.1;locus_tag=D8M40_02175;product=alpha 1%2C6 mannopyranosyltransferase;protein_id=RUP90685.1;transl_table=11 RBME01000001.1 Genbank gene 491697 492482 . + . ID=gene-D8M40_02180;Name=D8M40_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02180 RBME01000001.1 Protein Homology CDS 491697 492482 . + 0 ID=cds-RUP90686.1;Parent=gene-D8M40_02180;Dbxref=NCBI_GP:RUP90686.1;Name=RUP90686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279134.1;locus_tag=D8M40_02180;product=transcriptional regulator;protein_id=RUP90686.1;transl_table=11 RBME01000001.1 Genbank gene 492463 493905 . + . ID=gene-D8M40_02185;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=D8M40_02185 RBME01000001.1 Protein Homology CDS 492463 493905 . + 0 ID=cds-RUP90687.1;Parent=gene-D8M40_02185;Dbxref=NCBI_GP:RUP90687.1;Name=RUP90687.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845883.1;locus_tag=D8M40_02185;product=Fe-S cluster assembly protein SufB;protein_id=RUP90687.1;transl_table=11 RBME01000001.1 Genbank gene 493907 495073 . + . ID=gene-D8M40_02190;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=D8M40_02190 RBME01000001.1 Protein Homology CDS 493907 495073 . + 0 ID=cds-RUP90688.1;Parent=gene-D8M40_02190;Dbxref=NCBI_GP:RUP90688.1;Name=RUP90688.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186736.1;locus_tag=D8M40_02190;product=Fe-S cluster assembly protein SufD;protein_id=RUP90688.1;transl_table=11 RBME01000001.1 Genbank gene 495151 495906 . + . ID=gene-D8M40_02195;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=D8M40_02195 RBME01000001.1 Protein Homology CDS 495151 495906 . + 0 ID=cds-RUP90689.1;Parent=gene-D8M40_02195;Dbxref=NCBI_GP:RUP90689.1;Name=RUP90689.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767685.1;locus_tag=D8M40_02195;product=Fe-S cluster assembly ATPase SufC;protein_id=RUP90689.1;transl_table=11 RBME01000001.1 Genbank gene 495978 497219 . + . ID=gene-D8M40_02200;Name=D8M40_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02200 RBME01000001.1 Protein Homology CDS 495978 497219 . + 0 ID=cds-RUP90690.1;Parent=gene-D8M40_02200;Dbxref=NCBI_GP:RUP90690.1;Name=RUP90690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845880.1;locus_tag=D8M40_02200;product=cysteine desulfurase;protein_id=RUP90690.1;transl_table=11 RBME01000001.1 Genbank gene 497225 497677 . + . ID=gene-D8M40_02205;Name=D8M40_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02205 RBME01000001.1 Protein Homology CDS 497225 497677 . + 0 ID=cds-RUP90691.1;Parent=gene-D8M40_02205;Dbxref=NCBI_GP:RUP90691.1;Name=RUP90691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279143.1;locus_tag=D8M40_02205;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=RUP90691.1;transl_table=11 RBME01000001.1 Genbank gene 497677 498111 . + . ID=gene-D8M40_02210;Name=D8M40_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02210 RBME01000001.1 Protein Homology CDS 497677 498111 . + 0 ID=cds-RUP90692.1;Parent=gene-D8M40_02210;Dbxref=NCBI_GP:RUP90692.1;Name=RUP90692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186729.1;locus_tag=D8M40_02210;product=metal-sulfur cluster assembly factor;protein_id=RUP90692.1;transl_table=11 RBME01000001.1 Genbank gene 498231 498839 . - . ID=gene-D8M40_02215;Name=D8M40_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02215 RBME01000001.1 Protein Homology CDS 498231 498839 . - 0 ID=cds-RUP90693.1;Parent=gene-D8M40_02215;Dbxref=NCBI_GP:RUP90693.1;Name=RUP90693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186507.1;locus_tag=D8M40_02215;product=DNA-binding response regulator;protein_id=RUP90693.1;transl_table=11 RBME01000001.1 Genbank gene 498836 499963 . - . ID=gene-D8M40_02220;Name=D8M40_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02220 RBME01000001.1 Protein Homology CDS 498836 499963 . - 0 ID=cds-RUP90694.1;Parent=gene-D8M40_02220;Dbxref=NCBI_GP:RUP90694.1;Name=RUP90694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119576.1;locus_tag=D8M40_02220;product=sensor histidine kinase;protein_id=RUP90694.1;transl_table=11 RBME01000001.1 Genbank gene 499964 500725 . - . ID=gene-D8M40_02225;Name=D8M40_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02225 RBME01000001.1 Protein Homology CDS 499964 500725 . - 0 ID=cds-RUP90695.1;Parent=gene-D8M40_02225;Dbxref=NCBI_GP:RUP90695.1;Name=RUP90695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005294577.1;locus_tag=D8M40_02225;product=ABC transporter permease;protein_id=RUP90695.1;transl_table=11 RBME01000001.1 Genbank gene 500730 501638 . - . ID=gene-D8M40_02230;Name=D8M40_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02230 RBME01000001.1 Protein Homology CDS 500730 501638 . - 0 ID=cds-RUP90696.1;Parent=gene-D8M40_02230;Dbxref=NCBI_GP:RUP90696.1;Name=RUP90696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119574.1;locus_tag=D8M40_02230;product=ABC transporter ATP-binding protein;protein_id=RUP90696.1;transl_table=11 RBME01000001.1 Genbank gene 501842 501918 . - . ID=gene-D8M40_02235;Name=D8M40_02235;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_02235 RBME01000001.1 tRNAscan-SE tRNA 501842 501918 . - . ID=rna-D8M40_02235;Parent=gene-D8M40_02235;anticodon=(pos:complement(501882..501884));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02235;product=tRNA-Pro RBME01000001.1 tRNAscan-SE exon 501842 501918 . - . ID=exon-D8M40_02235-1;Parent=rna-D8M40_02235;anticodon=(pos:complement(501882..501884));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02235;product=tRNA-Pro RBME01000001.1 Genbank gene 502049 503680 . + . ID=gene-D8M40_02240;Name=D8M40_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02240 RBME01000001.1 Protein Homology CDS 502049 503680 . + 0 ID=cds-RUP90697.1;Parent=gene-D8M40_02240;Dbxref=NCBI_GP:RUP90697.1;Name=RUP90697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017030.1;locus_tag=D8M40_02240;product=ABC transporter ATP-binding protein;protein_id=RUP90697.1;transl_table=11 RBME01000001.1 Genbank gene 503782 504516 . + . ID=gene-D8M40_02245;Name=D8M40_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02245 RBME01000001.1 GeneMarkS+ CDS 503782 504516 . + 0 ID=cds-RUP90698.1;Parent=gene-D8M40_02245;Dbxref=NCBI_GP:RUP90698.1;Name=RUP90698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02245;product=hypothetical protein;protein_id=RUP90698.1;transl_table=11 RBME01000001.1 Genbank gene 504577 505941 . - . ID=gene-D8M40_02250;Name=D8M40_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02250 RBME01000001.1 Protein Homology CDS 504577 505941 . - 0 ID=cds-RUP90699.1;Parent=gene-D8M40_02250;Dbxref=NCBI_GP:RUP90699.1;Name=RUP90699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017032.1;locus_tag=D8M40_02250;product=PFL family protein;protein_id=RUP90699.1;transl_table=11 RBME01000001.1 Genbank gene 505970 506239 . - . ID=gene-D8M40_02255;Name=D8M40_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02255 RBME01000001.1 Protein Homology CDS 505970 506239 . - 0 ID=cds-RUP90700.1;Parent=gene-D8M40_02255;Dbxref=NCBI_GP:RUP90700.1;Name=RUP90700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186707.1;locus_tag=D8M40_02255;product=ACT domain-containing protein;protein_id=RUP90700.1;transl_table=11 RBME01000001.1 Genbank gene 506318 507022 . + . ID=gene-D8M40_02260;Name=D8M40_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02260 RBME01000001.1 Protein Homology CDS 506318 507022 . + 0 ID=cds-RUP90701.1;Parent=gene-D8M40_02260;Dbxref=NCBI_GP:RUP90701.1;Name=RUP90701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119562.1;locus_tag=D8M40_02260;product=NAD(P)-dependent oxidoreductase;protein_id=RUP90701.1;transl_table=11 RBME01000001.1 Genbank gene 507019 507762 . - . ID=gene-D8M40_02265;Name=D8M40_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02265 RBME01000001.1 Protein Homology CDS 507019 507762 . - 0 ID=cds-RUP90702.1;Parent=gene-D8M40_02265;Dbxref=NCBI_GP:RUP90702.1;Name=RUP90702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119561.1;locus_tag=D8M40_02265;product=glutamine amidotransferase;protein_id=RUP90702.1;transl_table=11 RBME01000001.1 Genbank gene 507788 508357 . - . ID=gene-D8M40_02270;Name=D8M40_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02270 RBME01000001.1 Protein Homology CDS 507788 508357 . - 0 ID=cds-RUP90703.1;Parent=gene-D8M40_02270;Dbxref=NCBI_GP:RUP90703.1;Name=RUP90703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119560.1;locus_tag=D8M40_02270;product=TetR/AcrR family transcriptional regulator;protein_id=RUP90703.1;transl_table=11 RBME01000001.1 Genbank gene 508481 511312 . - . ID=gene-D8M40_02275;Name=D8M40_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02275 RBME01000001.1 Protein Homology CDS 508481 511312 . - 0 ID=cds-RUP90704.1;Parent=gene-D8M40_02275;Dbxref=NCBI_GP:RUP90704.1;Name=RUP90704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845844.1;locus_tag=D8M40_02275;product=aconitate hydratase;protein_id=RUP90704.1;transl_table=11 RBME01000001.1 Genbank gene 511547 512047 . + . ID=gene-D8M40_02280;Name=D8M40_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02280 RBME01000001.1 GeneMarkS+ CDS 511547 512047 . + 0 ID=cds-RUP90705.1;Parent=gene-D8M40_02280;Dbxref=NCBI_GP:RUP90705.1;Name=RUP90705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02280;product=hypothetical protein;protein_id=RUP90705.1;transl_table=11 RBME01000001.1 Genbank gene 512524 514302 . + . ID=gene-D8M40_02285;Name=D8M40_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02285 RBME01000001.1 Protein Homology CDS 512524 514302 . + 0 ID=cds-RUP90706.1;Parent=gene-D8M40_02285;Dbxref=NCBI_GP:RUP90706.1;Name=RUP90706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00877.17;locus_tag=D8M40_02285;product=hydrolase;protein_id=RUP90706.1;transl_table=11 RBME01000001.1 Genbank gene 514350 515420 . + . ID=gene-D8M40_02290;Name=D8M40_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02290 RBME01000001.1 Protein Homology CDS 514350 515420 . + 0 ID=cds-RUP90707.1;Parent=gene-D8M40_02290;Dbxref=NCBI_GP:RUP90707.1;Name=RUP90707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282999.1;locus_tag=D8M40_02290;product=ferrochelatase;protein_id=RUP90707.1;transl_table=11 RBME01000001.1 Genbank gene 515422 516186 . - . ID=gene-D8M40_02295;Name=D8M40_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02295 RBME01000001.1 Protein Homology CDS 515422 516186 . - 0 ID=cds-RUP90708.1;Parent=gene-D8M40_02295;Dbxref=NCBI_GP:RUP90708.1;Name=RUP90708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186688.1;locus_tag=D8M40_02295;product=hypothetical protein;protein_id=RUP90708.1;transl_table=11 RBME01000001.1 Genbank gene 516220 517068 . + . ID=gene-D8M40_02300;Name=D8M40_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02300 RBME01000001.1 Protein Homology CDS 516220 517068 . + 0 ID=cds-RUP90709.1;Parent=gene-D8M40_02300;Dbxref=NCBI_GP:RUP90709.1;Name=RUP90709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324809.1;locus_tag=D8M40_02300;product=DUF3097 domain-containing protein;protein_id=RUP90709.1;transl_table=11 RBME01000001.1 Genbank gene 517034 517606 . - . ID=gene-D8M40_02305;Name=D8M40_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02305 RBME01000001.1 Protein Homology CDS 517034 517606 . - 0 ID=cds-RUP90710.1;Parent=gene-D8M40_02305;Dbxref=NCBI_GP:RUP90710.1;Name=RUP90710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823707.1;locus_tag=D8M40_02305;product=MarR family transcriptional regulator;protein_id=RUP90710.1;transl_table=11 RBME01000001.1 Genbank gene 517643 518455 . - . ID=gene-D8M40_02310;Name=D8M40_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02310 RBME01000001.1 Protein Homology CDS 517643 518455 . - 0 ID=cds-RUP90711.1;Parent=gene-D8M40_02310;Dbxref=NCBI_GP:RUP90711.1;Name=RUP90711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715030.1;locus_tag=D8M40_02310;product=TVP38/TMEM64 family protein;protein_id=RUP90711.1;transl_table=11 RBME01000001.1 Genbank gene 518625 519827 . + . ID=gene-D8M40_02315;Name=D8M40_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02315 RBME01000001.1 Protein Homology CDS 518625 519827 . + 0 ID=cds-RUP90712.1;Parent=gene-D8M40_02315;Dbxref=NCBI_GP:RUP90712.1;Name=RUP90712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119551.1;locus_tag=D8M40_02315;product=ferrisiderophore receptor Irp6A;protein_id=RUP90712.1;transl_table=11 RBME01000001.1 Genbank gene 519899 520930 . + . ID=gene-D8M40_02320;Name=D8M40_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02320 RBME01000001.1 Protein Homology CDS 519899 520930 . + 0 ID=cds-RUP90817.1;Parent=gene-D8M40_02320;Dbxref=NCBI_GP:RUP90817.1;Name=RUP90817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277826.1;locus_tag=D8M40_02320;product=iron ABC transporter permease;protein_id=RUP90817.1;transl_table=11 RBME01000001.1 Genbank gene 520984 521733 . + . ID=gene-D8M40_02325;Name=D8M40_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02325 RBME01000001.1 Protein Homology CDS 520984 521733 . + 0 ID=cds-RUP90818.1;Parent=gene-D8M40_02325;Dbxref=NCBI_GP:RUP90818.1;Name=RUP90818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458148.1;locus_tag=D8M40_02325;product=ABC transporter ATP-binding protein;protein_id=RUP90818.1;transl_table=11 RBME01000001.1 Genbank gene 521853 521938 . - . ID=gene-D8M40_02330;Name=D8M40_02330;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_02330 RBME01000001.1 tRNAscan-SE tRNA 521853 521938 . - . ID=rna-D8M40_02330;Parent=gene-D8M40_02330;anticodon=(pos:complement(521903..521905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02330;product=tRNA-Leu RBME01000001.1 tRNAscan-SE exon 521853 521938 . - . ID=exon-D8M40_02330-1;Parent=rna-D8M40_02330;anticodon=(pos:complement(521903..521905));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02330;product=tRNA-Leu RBME01000001.1 Genbank gene 522168 522707 . + . ID=gene-D8M40_02335;Name=D8M40_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02335 RBME01000001.1 Protein Homology CDS 522168 522707 . + 0 ID=cds-RUP90713.1;Parent=gene-D8M40_02335;Dbxref=NCBI_GP:RUP90713.1;Name=RUP90713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324806.1;locus_tag=D8M40_02335;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=RUP90713.1;transl_table=11 RBME01000001.1 Genbank gene 522731 523147 . + . ID=gene-D8M40_02340;Name=D8M40_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02340 RBME01000001.1 Protein Homology CDS 522731 523147 . + 0 ID=cds-RUP90714.1;Parent=gene-D8M40_02340;Dbxref=NCBI_GP:RUP90714.1;Name=RUP90714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119547.1;locus_tag=D8M40_02340;product=hypothetical protein;protein_id=RUP90714.1;transl_table=11 RBME01000001.1 Genbank gene 523144 524286 . - . ID=gene-D8M40_02345;Name=D8M40_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02345 RBME01000001.1 Protein Homology CDS 523144 524286 . - 0 ID=cds-RUP90819.1;Parent=gene-D8M40_02345;Dbxref=NCBI_GP:RUP90819.1;Name=RUP90819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324804.1;locus_tag=D8M40_02345;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=RUP90819.1;transl_table=11 RBME01000001.1 Genbank gene 524319 525290 . - . ID=gene-D8M40_02350;Name=D8M40_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02350 RBME01000001.1 GeneMarkS+ CDS 524319 525290 . - 0 ID=cds-RUP90715.1;Parent=gene-D8M40_02350;Dbxref=NCBI_GP:RUP90715.1;Name=RUP90715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02350;product=hypothetical protein;protein_id=RUP90715.1;transl_table=11 RBME01000001.1 Genbank gene 525578 526405 . + . ID=gene-D8M40_02355;Name=D8M40_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02355 RBME01000001.1 Protein Homology CDS 525578 526405 . + 0 ID=cds-RUP90820.1;Parent=gene-D8M40_02355;Dbxref=NCBI_GP:RUP90820.1;Name=RUP90820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823701.1;locus_tag=D8M40_02355;product=undecaprenyl-diphosphate phosphatase;protein_id=RUP90820.1;transl_table=11 RBME01000001.1 Genbank gene 526427 527683 . + . ID=gene-D8M40_02360;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=D8M40_02360 RBME01000001.1 Protein Homology CDS 526427 527683 . + 0 ID=cds-RUP90716.1;Parent=gene-D8M40_02360;Dbxref=NCBI_GP:RUP90716.1;Name=RUP90716.1;gbkey=CDS;gene=mshC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119543.1;locus_tag=D8M40_02360;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=RUP90716.1;transl_table=11 RBME01000001.1 Genbank gene 527711 527974 . + . ID=gene-D8M40_02365;Name=D8M40_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02365 RBME01000001.1 Protein Homology CDS 527711 527974 . + 0 ID=cds-RUP90821.1;Parent=gene-D8M40_02365;Dbxref=NCBI_GP:RUP90821.1;Name=RUP90821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581962.1;locus_tag=D8M40_02365;product=phosphoribosyl-ATP diphosphatase;protein_id=RUP90821.1;transl_table=11 RBME01000001.1 Genbank gene 528012 528857 . + . ID=gene-D8M40_02370;Name=D8M40_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02370 RBME01000001.1 Protein Homology CDS 528012 528857 . + 0 ID=cds-RUP90717.1;Parent=gene-D8M40_02370;Dbxref=NCBI_GP:RUP90717.1;Name=RUP90717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823696.1;locus_tag=D8M40_02370;product=ATP phosphoribosyltransferase;protein_id=RUP90717.1;transl_table=11 RBME01000001.1 Genbank gene 528973 530514 . + . ID=gene-D8M40_02375;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=D8M40_02375 RBME01000001.1 Protein Homology CDS 528973 530514 . + 0 ID=cds-RUP90718.1;Parent=gene-D8M40_02375;Dbxref=NCBI_GP:RUP90718.1;Name=RUP90718.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186653.1;locus_tag=D8M40_02375;product=aspartate ammonia-lyase;protein_id=RUP90718.1;transl_table=11 RBME01000001.1 Genbank gene 530596 532260 . + . ID=gene-D8M40_02380;Name=D8M40_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02380 RBME01000001.1 Protein Homology CDS 530596 532260 . + 0 ID=cds-RUP90822.1;Parent=gene-D8M40_02380;Dbxref=NCBI_GP:RUP90822.1;Name=RUP90822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186644.1;locus_tag=D8M40_02380;product=formate--tetrahydrofolate ligase;protein_id=RUP90822.1;transl_table=11 RBME01000001.1 Genbank gene 532316 533164 . - . ID=gene-D8M40_02385;Name=D8M40_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02385 RBME01000001.1 Protein Homology CDS 532316 533164 . - 0 ID=cds-RUP90719.1;Parent=gene-D8M40_02385;Dbxref=NCBI_GP:RUP90719.1;Name=RUP90719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324785.1;locus_tag=D8M40_02385;product=RecB family exonuclease;protein_id=RUP90719.1;transl_table=11 RBME01000001.1 Genbank gene 533259 534545 . + . ID=gene-D8M40_02390;Name=D8M40_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02390 RBME01000001.1 Protein Homology CDS 533259 534545 . + 0 ID=cds-RUP90720.1;Parent=gene-D8M40_02390;Dbxref=NCBI_GP:RUP90720.1;Name=RUP90720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119537.1;locus_tag=D8M40_02390;product=M18 family aminopeptidase;protein_id=RUP90720.1;transl_table=11 RBME01000001.1 Genbank gene 534576 535412 . + . ID=gene-D8M40_02395;Name=D8M40_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02395 RBME01000001.1 Protein Homology CDS 534576 535412 . + 0 ID=cds-RUP90721.1;Parent=gene-D8M40_02395;Dbxref=NCBI_GP:RUP90721.1;Name=RUP90721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600714.1;locus_tag=D8M40_02395;product=tRNA (adenine-N1)-methyltransferase;protein_id=RUP90721.1;transl_table=11 RBME01000001.1 Genbank gene 535620 537152 . + . ID=gene-D8M40_02400;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=D8M40_02400 RBME01000001.1 Protein Homology CDS 535620 537152 . + 0 ID=cds-RUP90722.1;Parent=gene-D8M40_02400;Dbxref=NCBI_GP:RUP90722.1;Name=RUP90722.1;gbkey=CDS;gene=arc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119535.1;locus_tag=D8M40_02400;product=proteasome ATPase;protein_id=RUP90722.1;transl_table=11 RBME01000001.1 Genbank gene 537268 538797 . + . ID=gene-D8M40_02405;Name=D8M40_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02405 RBME01000001.1 Protein Homology CDS 537268 538797 . + 0 ID=cds-RUP90823.1;Parent=gene-D8M40_02405;Dbxref=NCBI_GP:RUP90823.1;Name=RUP90823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119534.1;locus_tag=D8M40_02405;product=proteasome accessory factor PafA2;protein_id=RUP90823.1;transl_table=11 RBME01000001.1 Genbank gene 538914 539126 . + . ID=gene-D8M40_02410;Name=D8M40_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02410 RBME01000001.1 Protein Homology CDS 538914 539126 . + 0 ID=cds-RUP90723.1;Parent=gene-D8M40_02410;Dbxref=NCBI_GP:RUP90723.1;Name=RUP90723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324778.1;locus_tag=D8M40_02410;product=ubiquitin-like protein Pup;protein_id=RUP90723.1;transl_table=11 RBME01000001.1 Genbank gene 539123 540559 . + . ID=gene-D8M40_02415;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=D8M40_02415 RBME01000001.1 Protein Homology CDS 539123 540559 . + 0 ID=cds-RUP90724.1;Parent=gene-D8M40_02415;Dbxref=NCBI_GP:RUP90724.1;Name=RUP90724.1;gbkey=CDS;gene=pafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119532.1;locus_tag=D8M40_02415;product=Pup--protein ligase;protein_id=RUP90724.1;transl_table=11 RBME01000001.1 Genbank gene 540565 541611 . + . ID=gene-D8M40_02420;Name=D8M40_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02420 RBME01000001.1 Protein Homology CDS 540565 541611 . + 0 ID=cds-RUP90725.1;Parent=gene-D8M40_02420;Dbxref=NCBI_GP:RUP90725.1;Name=RUP90725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324776.1;locus_tag=D8M40_02420;product=WYL domain-containing protein;protein_id=RUP90725.1;transl_table=11 RBME01000001.1 Genbank gene 541608 542606 . + . ID=gene-D8M40_02425;Name=D8M40_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02425 RBME01000001.1 Protein Homology CDS 541608 542606 . + 0 ID=cds-RUP90726.1;Parent=gene-D8M40_02425;Dbxref=NCBI_GP:RUP90726.1;Name=RUP90726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119530.1;locus_tag=D8M40_02425;product=WYL domain-containing protein;protein_id=RUP90726.1;transl_table=11 RBME01000001.1 Genbank gene 542670 542990 . + . ID=gene-D8M40_02430;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=D8M40_02430 RBME01000001.1 Protein Homology CDS 542670 542990 . + 0 ID=cds-RUP90727.1;Parent=gene-D8M40_02430;Dbxref=NCBI_GP:RUP90727.1;Name=RUP90727.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119529.1;locus_tag=D8M40_02430;product=twin-arginine translocase TatA/TatE family subunit;protein_id=RUP90727.1;transl_table=11 RBME01000001.1 Genbank gene 543225 544265 . + . ID=gene-D8M40_02435;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=D8M40_02435 RBME01000001.1 Protein Homology CDS 543225 544265 . + 0 ID=cds-RUP90728.1;Parent=gene-D8M40_02435;Dbxref=NCBI_GP:RUP90728.1;Name=RUP90728.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119528.1;locus_tag=D8M40_02435;product=twin-arginine translocase subunit TatC;protein_id=RUP90728.1;transl_table=11 RBME01000001.1 Genbank gene 544277 547087 . + . ID=gene-D8M40_02440;Name=D8M40_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02440 RBME01000001.1 Protein Homology CDS 544277 547087 . + 0 ID=cds-RUP90729.1;Parent=gene-D8M40_02440;Dbxref=NCBI_GP:RUP90729.1;Name=RUP90729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279213.1;locus_tag=D8M40_02440;product=DEAD/DEAH box helicase;protein_id=RUP90729.1;transl_table=11 RBME01000001.1 Genbank gene 547112 547849 . + . ID=gene-D8M40_02445;Name=D8M40_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02445 RBME01000001.1 Protein Homology CDS 547112 547849 . + 0 ID=cds-RUP90730.1;Parent=gene-D8M40_02445;Dbxref=NCBI_GP:RUP90730.1;Name=RUP90730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279217.1;locus_tag=D8M40_02445;product=FxsA family protein;protein_id=RUP90730.1;transl_table=11 RBME01000001.1 Genbank gene 547856 549484 . + . ID=gene-D8M40_02450;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=D8M40_02450 RBME01000001.1 Protein Homology CDS 547856 549484 . + 0 ID=cds-RUP90731.1;Parent=gene-D8M40_02450;Dbxref=NCBI_GP:RUP90731.1;Name=RUP90731.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119525.1;locus_tag=D8M40_02450;product=apolipoprotein N-acyltransferase;protein_id=RUP90731.1;transl_table=11 RBME01000001.1 Genbank gene 549491 550381 . + . ID=gene-D8M40_02455;Name=D8M40_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02455 RBME01000001.1 Protein Homology CDS 549491 550381 . + 0 ID=cds-RUP90732.1;Parent=gene-D8M40_02455;Dbxref=NCBI_GP:RUP90732.1;Name=RUP90732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119524.1;locus_tag=D8M40_02455;product=polyprenol monophosphomannose synthase;protein_id=RUP90732.1;transl_table=11 RBME01000001.1 Genbank gene 550612 550998 . - . ID=gene-D8M40_02460;Name=D8M40_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02460 RBME01000001.1 Protein Homology CDS 550612 550998 . - 0 ID=cds-RUP90733.1;Parent=gene-D8M40_02460;Dbxref=NCBI_GP:RUP90733.1;Name=RUP90733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400870.1;locus_tag=D8M40_02460;product=RNA polymerase-binding protein RbpA;protein_id=RUP90733.1;transl_table=11 RBME01000001.1 Genbank gene 551220 551564 . + . ID=gene-D8M40_02465;Name=D8M40_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02465 RBME01000001.1 Protein Homology CDS 551220 551564 . + 0 ID=cds-RUP90734.1;Parent=gene-D8M40_02465;Dbxref=NCBI_GP:RUP90734.1;Name=RUP90734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011559901.1;locus_tag=D8M40_02465;product=hypothetical protein;protein_id=RUP90734.1;transl_table=11 RBME01000001.1 Genbank gene 551564 552280 . + . ID=gene-D8M40_02470;Name=D8M40_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02470 RBME01000001.1 Protein Homology CDS 551564 552280 . + 0 ID=cds-RUP90735.1;Parent=gene-D8M40_02470;Dbxref=NCBI_GP:RUP90735.1;Name=RUP90735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119521.1;locus_tag=D8M40_02470;product=YceI family protein;protein_id=RUP90735.1;transl_table=11 RBME01000001.1 Genbank gene 552370 553083 . + . ID=gene-D8M40_02475;Name=D8M40_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02475 RBME01000001.1 Protein Homology CDS 552370 553083 . + 0 ID=cds-RUP90736.1;Parent=gene-D8M40_02475;Dbxref=NCBI_GP:RUP90736.1;Name=RUP90736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01810.16;locus_tag=D8M40_02475;product=hypothetical protein;protein_id=RUP90736.1;transl_table=11 RBME01000001.1 Genbank gene 553130 554794 . + . ID=gene-D8M40_02480;Name=D8M40_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02480 RBME01000001.1 Protein Homology CDS 553130 554794 . + 0 ID=cds-RUP90737.1;Parent=gene-D8M40_02480;Dbxref=NCBI_GP:RUP90737.1;Name=RUP90737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06889.9;locus_tag=D8M40_02480;product=DUF1266 domain-containing protein;protein_id=RUP90737.1;transl_table=11 RBME01000001.1 Genbank gene 554803 556167 . - . ID=gene-D8M40_02485;Name=D8M40_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02485 RBME01000001.1 Protein Homology CDS 554803 556167 . - 0 ID=cds-RUP90738.1;Parent=gene-D8M40_02485;Dbxref=NCBI_GP:RUP90738.1;Name=RUP90738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119518.1;locus_tag=D8M40_02485;product=SAM-dependent methyltransferase;protein_id=RUP90738.1;transl_table=11 RBME01000001.1 Genbank gene 556267 557667 . + . ID=gene-D8M40_02490;Name=D8M40_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02490 RBME01000001.1 Protein Homology CDS 556267 557667 . + 0 ID=cds-RUP90739.1;Parent=gene-D8M40_02490;Dbxref=NCBI_GP:RUP90739.1;Name=RUP90739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119517.1;locus_tag=D8M40_02490;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP90739.1;transl_table=11 RBME01000001.1 Genbank gene 557765 559273 . + . ID=gene-D8M40_02495;Name=D8M40_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02495 RBME01000001.1 Protein Homology CDS 557765 559273 . + 0 ID=cds-RUP90824.1;Parent=gene-D8M40_02495;Dbxref=NCBI_GP:RUP90824.1;Name=RUP90824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400857.1;locus_tag=D8M40_02495;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=RUP90824.1;transl_table=11 RBME01000001.1 Genbank gene 559317 559799 . - . ID=gene-D8M40_02500;Name=D8M40_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02500 RBME01000001.1 Protein Homology CDS 559317 559799 . - 0 ID=cds-RUP90740.1;Parent=gene-D8M40_02500;Dbxref=NCBI_GP:RUP90740.1;Name=RUP90740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279245.1;locus_tag=D8M40_02500;product=PaaI family thioesterase;protein_id=RUP90740.1;transl_table=11 RBME01000001.1 Genbank gene 559944 561410 . + . ID=gene-D8M40_02505;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=D8M40_02505 RBME01000001.1 Protein Homology CDS 559944 561410 . + 0 ID=cds-RUP90741.1;Parent=gene-D8M40_02505;Dbxref=NCBI_GP:RUP90741.1;Name=RUP90741.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119514.1;locus_tag=D8M40_02505;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=RUP90741.1;transl_table=11 RBME01000001.1 Genbank gene 561472 563031 . - . ID=gene-D8M40_02510;Name=D8M40_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02510 RBME01000001.1 Protein Homology CDS 561472 563031 . - 0 ID=cds-RUP90742.1;Parent=gene-D8M40_02510;Dbxref=NCBI_GP:RUP90742.1;Name=RUP90742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454609.1;locus_tag=D8M40_02510;product=DASS family sodium-coupled anion symporter;protein_id=RUP90742.1;transl_table=11 RBME01000001.1 Genbank gene 563218 564648 . + . ID=gene-D8M40_02515;Name=D8M40_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02515 RBME01000001.1 Protein Homology CDS 563218 564648 . + 0 ID=cds-RUP90743.1;Parent=gene-D8M40_02515;Dbxref=NCBI_GP:RUP90743.1;Name=RUP90743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119512.1;locus_tag=D8M40_02515;product=DEAD/DEAH box helicase;protein_id=RUP90743.1;transl_table=11 RBME01000001.1 Genbank gene 564661 565533 . + . ID=gene-D8M40_02520;Name=D8M40_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02520 RBME01000001.1 Protein Homology CDS 564661 565533 . + 0 ID=cds-RUP90744.1;Parent=gene-D8M40_02520;Dbxref=NCBI_GP:RUP90744.1;Name=RUP90744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324743.1;locus_tag=D8M40_02520;product=hypothetical protein;protein_id=RUP90744.1;transl_table=11 RBME01000001.1 Genbank gene 565511 567028 . + . ID=gene-D8M40_02525;Name=D8M40_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02525 RBME01000001.1 GeneMarkS+ CDS 565511 567028 . + 0 ID=cds-RUP90745.1;Parent=gene-D8M40_02525;Dbxref=NCBI_GP:RUP90745.1;Name=RUP90745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02525;product=VWA domain-containing protein;protein_id=RUP90745.1;transl_table=11 RBME01000001.1 Genbank gene 567058 567642 . - . ID=gene-D8M40_02530;Name=D8M40_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02530 RBME01000001.1 Protein Homology CDS 567058 567642 . - 0 ID=cds-RUP90825.1;Parent=gene-D8M40_02530;Dbxref=NCBI_GP:RUP90825.1;Name=RUP90825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279251.1;locus_tag=D8M40_02530;product=MerR family transcriptional regulator;protein_id=RUP90825.1;transl_table=11 RBME01000001.1 Genbank gene 567952 568701 . - . ID=gene-D8M40_02535;Name=D8M40_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02535 RBME01000001.1 Protein Homology CDS 567952 568701 . - 0 ID=cds-RUP90746.1;Parent=gene-D8M40_02535;Dbxref=NCBI_GP:RUP90746.1;Name=RUP90746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324733.1;locus_tag=D8M40_02535;product=MerR family transcriptional regulator;protein_id=RUP90746.1;transl_table=11 RBME01000001.1 Genbank gene 568711 569142 . - . ID=gene-D8M40_02540;Name=D8M40_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02540 RBME01000001.1 Protein Homology CDS 568711 569142 . - 0 ID=cds-RUP90747.1;Parent=gene-D8M40_02540;Dbxref=NCBI_GP:RUP90747.1;Name=RUP90747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651203.1;locus_tag=D8M40_02540;product=FHA domain-containing protein;protein_id=RUP90747.1;transl_table=11 RBME01000001.1 Genbank gene 569277 571577 . - . ID=gene-D8M40_02545;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=D8M40_02545 RBME01000001.1 Protein Homology CDS 569277 571577 . - 0 ID=cds-RUP90748.1;Parent=gene-D8M40_02545;Dbxref=NCBI_GP:RUP90748.1;Name=RUP90748.1;gbkey=CDS;gene=secA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531455.1;locus_tag=D8M40_02545;product=accessory Sec system translocase SecA2;protein_id=RUP90748.1;transl_table=11 RBME01000001.1 Genbank gene 571629 572474 . - . ID=gene-D8M40_02550;Name=D8M40_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02550 RBME01000001.1 Protein Homology CDS 571629 572474 . - 0 ID=cds-RUP90826.1;Parent=gene-D8M40_02550;Dbxref=NCBI_GP:RUP90826.1;Name=RUP90826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279278.1;locus_tag=D8M40_02550;product=hypothetical protein;protein_id=RUP90826.1;transl_table=11 RBME01000001.1 Genbank gene 572771 574621 . - . ID=gene-D8M40_02555;Name=D8M40_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02555 RBME01000001.1 Protein Homology CDS 572771 574621 . - 0 ID=cds-RUP90749.1;Parent=gene-D8M40_02555;Dbxref=NCBI_GP:RUP90749.1;Name=RUP90749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119504.1;locus_tag=D8M40_02555;product=ABC transporter ATP-binding protein;protein_id=RUP90749.1;transl_table=11 RBME01000001.1 Genbank gene 574618 576165 . - . ID=gene-D8M40_02560;Name=D8M40_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02560 RBME01000001.1 Protein Homology CDS 574618 576165 . - 0 ID=cds-RUP90750.1;Parent=gene-D8M40_02560;Dbxref=NCBI_GP:RUP90750.1;Name=RUP90750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119503.1;locus_tag=D8M40_02560;product=ABC transporter ATP-binding protein;protein_id=RUP90750.1;transl_table=11 RBME01000001.1 Genbank gene 576197 576979 . + . ID=gene-D8M40_02565;Name=D8M40_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02565 RBME01000001.1 Protein Homology CDS 576197 576979 . + 0 ID=cds-RUP90751.1;Parent=gene-D8M40_02565;Dbxref=NCBI_GP:RUP90751.1;Name=RUP90751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017100.1;locus_tag=D8M40_02565;product=class I SAM-dependent methyltransferase;protein_id=RUP90751.1;transl_table=11 RBME01000001.1 Genbank gene 577012 579222 . - . ID=gene-D8M40_02570;Name=D8M40_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02570 RBME01000001.1 Protein Homology CDS 577012 579222 . - 0 ID=cds-RUP90752.1;Parent=gene-D8M40_02570;Dbxref=NCBI_GP:RUP90752.1;Name=RUP90752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119501.1;locus_tag=D8M40_02570;product=bifunctional cytidylate kinase/GTPase Der;protein_id=RUP90752.1;transl_table=11 RBME01000001.1 Genbank gene 579288 580145 . - . ID=gene-D8M40_02575;Name=D8M40_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02575 RBME01000001.1 Protein Homology CDS 579288 580145 . - 0 ID=cds-RUP90753.1;Parent=gene-D8M40_02575;Dbxref=NCBI_GP:RUP90753.1;Name=RUP90753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119500.1;locus_tag=D8M40_02575;product=rRNA pseudouridine synthase;protein_id=RUP90753.1;transl_table=11 RBME01000001.1 Genbank gene 580175 580774 . - . ID=gene-D8M40_02580;Name=D8M40_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02580 RBME01000001.1 Protein Homology CDS 580175 580774 . - 0 ID=cds-RUP90754.1;Parent=gene-D8M40_02580;Dbxref=NCBI_GP:RUP90754.1;Name=RUP90754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856269.1;locus_tag=D8M40_02580;product=SMC-Scp complex subunit ScpB;protein_id=RUP90754.1;transl_table=11 RBME01000001.1 Genbank gene 580879 581661 . - . ID=gene-D8M40_02585;Name=D8M40_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02585 RBME01000001.1 Protein Homology CDS 580879 581661 . - 0 ID=cds-RUP90827.1;Parent=gene-D8M40_02585;Dbxref=NCBI_GP:RUP90827.1;Name=RUP90827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531427.1;locus_tag=D8M40_02585;product=segregation/condensation protein A;protein_id=RUP90827.1;transl_table=11 RBME01000001.1 Genbank gene 581736 582611 . - . ID=gene-D8M40_02590;Name=D8M40_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02590 RBME01000001.1 Protein Homology CDS 581736 582611 . - 0 ID=cds-RUP90755.1;Parent=gene-D8M40_02590;Dbxref=NCBI_GP:RUP90755.1;Name=RUP90755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186491.1;locus_tag=D8M40_02590;product=ParA family protein;protein_id=RUP90755.1;transl_table=11 RBME01000001.1 Genbank gene 582819 583244 . - . ID=gene-D8M40_02595;Name=D8M40_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02595 RBME01000001.1 GeneMarkS+ CDS 582819 583244 . - 0 ID=cds-RUP90756.1;Parent=gene-D8M40_02595;Dbxref=NCBI_GP:RUP90756.1;Name=RUP90756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02595;product=hypothetical protein;protein_id=RUP90756.1;transl_table=11 RBME01000001.1 Genbank gene 583241 583549 . - . ID=gene-D8M40_02600;Name=D8M40_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02600 RBME01000001.1 GeneMarkS+ CDS 583241 583549 . - 0 ID=cds-RUP90757.1;Parent=gene-D8M40_02600;Dbxref=NCBI_GP:RUP90757.1;Name=RUP90757.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02600;product=hypothetical protein;protein_id=RUP90757.1;transl_table=11 RBME01000001.1 Genbank gene 583793 584722 . - . ID=gene-D8M40_02605;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=D8M40_02605 RBME01000001.1 Protein Homology CDS 583793 584722 . - 0 ID=cds-RUP90758.1;Parent=gene-D8M40_02605;Dbxref=NCBI_GP:RUP90758.1;Name=RUP90758.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119494.1;locus_tag=D8M40_02605;product=site-specific tyrosine recombinase XerD;protein_id=RUP90758.1;transl_table=11 RBME01000001.1 Genbank gene 584722 585477 . - . ID=gene-D8M40_02610;Name=D8M40_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02610 RBME01000001.1 Protein Homology CDS 584722 585477 . - 0 ID=cds-RUP90759.1;Parent=gene-D8M40_02610;Dbxref=NCBI_GP:RUP90759.1;Name=RUP90759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119493.1;locus_tag=D8M40_02610;product=NUDIX hydrolase;protein_id=RUP90759.1;transl_table=11 RBME01000001.1 Genbank gene 585470 586486 . - . ID=gene-D8M40_02615;Name=D8M40_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02615 RBME01000001.1 Protein Homology CDS 585470 586486 . - 0 ID=cds-RUP90760.1;Parent=gene-D8M40_02615;Dbxref=NCBI_GP:RUP90760.1;Name=RUP90760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11382.6;locus_tag=D8M40_02615;product=copper transporter;protein_id=RUP90760.1;transl_table=11 RBME01000001.1 Genbank gene 586486 587670 . - . ID=gene-D8M40_02620;Name=D8M40_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02620 RBME01000001.1 Protein Homology CDS 586486 587670 . - 0 ID=cds-RUP90761.1;Parent=gene-D8M40_02620;Dbxref=NCBI_GP:RUP90761.1;Name=RUP90761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186481.1;locus_tag=D8M40_02620;product=thiamine pyrophosphokinase;protein_id=RUP90761.1;transl_table=11 RBME01000001.1 Genbank gene 587728 589458 . - . ID=gene-D8M40_02625;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=D8M40_02625 RBME01000001.1 Protein Homology CDS 587728 589458 . - 0 ID=cds-RUP90762.1;Parent=gene-D8M40_02625;Dbxref=NCBI_GP:RUP90762.1;Name=RUP90762.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119490.1;locus_tag=D8M40_02625;product=DNA repair protein RecN;protein_id=RUP90762.1;transl_table=11 RBME01000001.1 Genbank gene 589467 590489 . - . ID=gene-D8M40_02630;Name=D8M40_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02630 RBME01000001.1 Protein Homology CDS 589467 590489 . - 0 ID=cds-RUP90763.1;Parent=gene-D8M40_02630;Dbxref=NCBI_GP:RUP90763.1;Name=RUP90763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119489.1;locus_tag=D8M40_02630;product=NAD kinase;protein_id=RUP90763.1;transl_table=11 RBME01000001.1 Genbank gene 590486 591322 . - . ID=gene-D8M40_02635;Name=D8M40_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02635 RBME01000001.1 Protein Homology CDS 590486 591322 . - 0 ID=cds-RUP90764.1;Parent=gene-D8M40_02635;Dbxref=NCBI_GP:RUP90764.1;Name=RUP90764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119488.1;locus_tag=D8M40_02635;product=TlyA family RNA methyltransferase;protein_id=RUP90764.1;transl_table=11 RBME01000001.1 Genbank gene 591552 592604 . - . ID=gene-D8M40_02640;Name=D8M40_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02640 RBME01000001.1 Protein Homology CDS 591552 592604 . - 0 ID=cds-RUP90765.1;Parent=gene-D8M40_02640;Dbxref=NCBI_GP:RUP90765.1;Name=RUP90765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324656.1;locus_tag=D8M40_02640;product=HAD-IIA family hydrolase;protein_id=RUP90765.1;transl_table=11 RBME01000001.1 Genbank pseudogene 592601 593314 . - . ID=gene-D8M40_02645;Name=D8M40_02645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_02645;pseudo=true RBME01000001.1 Protein Homology CDS 592601 593314 . - 0 ID=cds-D8M40_02645;Parent=gene-D8M40_02645;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856302.1;locus_tag=D8M40_02645;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000001.1 Genbank gene 593830 594333 . + . ID=gene-D8M40_02650;Name=D8M40_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02650 RBME01000001.1 Protein Homology CDS 593830 594333 . + 0 ID=cds-RUP90766.1;Parent=gene-D8M40_02650;Dbxref=NCBI_GP:RUP90766.1;Name=RUP90766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00565.15;locus_tag=D8M40_02650;product=hypothetical protein;protein_id=RUP90766.1;transl_table=11 RBME01000001.1 Genbank gene 594414 595544 . + . ID=gene-D8M40_02655;Name=D8M40_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02655 RBME01000001.1 Protein Homology CDS 594414 595544 . + 0 ID=cds-RUP90767.1;Parent=gene-D8M40_02655;Dbxref=NCBI_GP:RUP90767.1;Name=RUP90767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187778.1;locus_tag=D8M40_02655;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=RUP90767.1;transl_table=11 ##sequence-region RBME01000200.1 1 750 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000200.1 Genbank region 1 750 . + . ID=RBME01000200.1:1..750;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000200.1 Genbank gene 1 705 . + . ID=gene-D8M40_12645;Name=D8M40_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12645;partial=true;start_range=.,1 RBME01000200.1 Protein Homology CDS 1 705 . + 0 ID=cds-RUP82290.1;Parent=gene-D8M40_12645;Dbxref=NCBI_GP:RUP82290.1;Name=RUP82290.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003229166.1;locus_tag=D8M40_12645;partial=true;product=dihydroxy-acid dehydratase;protein_id=RUP82290.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000201.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000201.1 Genbank region 1 749 . + . ID=RBME01000201.1:1..749;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000201.1 Genbank gene 1 749 . - . ID=gene-D8M40_12650;Name=D8M40_12650;end_range=749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12650;partial=true;start_range=.,1 RBME01000201.1 Protein Homology CDS 1 749 . - 0 ID=cds-RUP82289.1;Parent=gene-D8M40_12650;Dbxref=NCBI_GP:RUP82289.1;Name=RUP82289.1;end_range=749,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014719721.1;locus_tag=D8M40_12650;partial=true;product=putative 2-dehydropantoate 2-reductase;protein_id=RUP82289.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000202.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000202.1 Genbank region 1 747 . + . ID=RBME01000202.1:1..747;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000202.1 Genbank gene 1 747 . - . ID=gene-D8M40_12655;Name=D8M40_12655;end_range=747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12655;partial=true;start_range=.,1 RBME01000202.1 Protein Homology CDS 1 747 . - 2 ID=cds-RUP82246.1;Parent=gene-D8M40_12655;Dbxref=NCBI_GP:RUP82246.1;Name=RUP82246.1;end_range=747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900652.1;locus_tag=D8M40_12655;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=RUP82246.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000203.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000203.1 Genbank region 1 747 . + . ID=RBME01000203.1:1..747;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000203.1 Genbank gene 1 641 . + . ID=gene-D8M40_12660;Name=D8M40_12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12660;partial=true;start_range=.,1 RBME01000203.1 Protein Homology CDS 1 641 . + 2 ID=cds-RUP82244.1;Parent=gene-D8M40_12660;Dbxref=NCBI_GP:RUP82244.1;Name=RUP82244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018929406.1;locus_tag=D8M40_12660;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP82244.1;start_range=.,1;transl_table=11 RBME01000203.1 Genbank gene 654 747 . + . ID=gene-D8M40_12665;Name=D8M40_12665;end_range=747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12665;partial=true RBME01000203.1 Protein Homology CDS 654 747 . + 0 ID=cds-RUP82245.1;Parent=gene-D8M40_12665;Dbxref=NCBI_GP:RUP82245.1;Name=RUP82245.1;end_range=747,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017845543.1;locus_tag=D8M40_12665;partial=true;product=ABC transporter permease;protein_id=RUP82245.1;transl_table=11 ##sequence-region RBME01000204.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000204.1 Genbank region 1 747 . + . ID=RBME01000204.1:1..747;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000204.1 Genbank gene 1 170 . - . ID=gene-D8M40_12670;Name=D8M40_12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12670;partial=true;start_range=.,1 RBME01000204.1 Protein Homology CDS 1 170 . - 0 ID=cds-RUP82242.1;Parent=gene-D8M40_12670;Dbxref=NCBI_GP:RUP82242.1;Name=RUP82242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016969420.1;locus_tag=D8M40_12670;partial=true;product=GNAT family N-acetyltransferase;protein_id=RUP82242.1;start_range=.,1;transl_table=11 RBME01000204.1 Genbank gene 163 639 . - . ID=gene-D8M40_12675;Name=D8M40_12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12675 RBME01000204.1 Protein Homology CDS 163 639 . - 0 ID=cds-RUP82243.1;Parent=gene-D8M40_12675;Dbxref=NCBI_GP:RUP82243.1;Name=RUP82243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003217021.1;locus_tag=D8M40_12675;product=carboxymuconolactone decarboxylase family protein;protein_id=RUP82243.1;transl_table=11 ##sequence-region RBME01000205.1 1 746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000205.1 Genbank region 1 746 . + . ID=RBME01000205.1:1..746;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000205.1 Genbank gene 1 746 . + . ID=gene-D8M40_12680;Name=D8M40_12680;end_range=746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12680;partial=true;start_range=.,1 RBME01000205.1 Protein Homology CDS 1 746 . + 1 ID=cds-RUP82241.1;Parent=gene-D8M40_12680;Dbxref=NCBI_GP:RUP82241.1;Name=RUP82241.1;end_range=746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015634935.1;locus_tag=D8M40_12680;partial=true;product=thioester reductase;protein_id=RUP82241.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000206.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000206.1 Genbank region 1 745 . + . ID=RBME01000206.1:1..745;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000206.1 Genbank gene 1 347 . + . ID=gene-D8M40_12685;Name=D8M40_12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12685;partial=true;start_range=.,1 RBME01000206.1 GeneMarkS+ CDS 1 347 . + 2 ID=cds-RUP82197.1;Parent=gene-D8M40_12685;Dbxref=NCBI_GP:RUP82197.1;Name=RUP82197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12685;partial=true;product=hypothetical protein;protein_id=RUP82197.1;start_range=.,1;transl_table=11 RBME01000206.1 Genbank gene 459 745 . + . ID=gene-D8M40_12690;Name=D8M40_12690;end_range=745,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12690;partial=true RBME01000206.1 Protein Homology CDS 459 745 . + 0 ID=cds-RUP82198.1;Parent=gene-D8M40_12690;Dbxref=NCBI_GP:RUP82198.1;Name=RUP82198.1;end_range=745,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017256487.1;locus_tag=D8M40_12690;partial=true;product=response regulator;protein_id=RUP82198.1;transl_table=11 ##sequence-region RBME01000207.1 1 745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000207.1 Genbank region 1 745 . + . ID=RBME01000207.1:1..745;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000207.1 Genbank gene 1 246 . + . ID=gene-D8M40_12695;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=D8M40_12695;partial=true;start_range=.,1 RBME01000207.1 Protein Homology CDS 1 246 . + 0 ID=cds-RUP82194.1;Parent=gene-D8M40_12695;Dbxref=NCBI_GP:RUP82194.1;Name=RUP82194.1;gbkey=CDS;gene=fdx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_791254.1;locus_tag=D8M40_12695;partial=true;product=ISC system 2Fe-2S type ferredoxin;protein_id=RUP82194.1;start_range=.,1;transl_table=11 RBME01000207.1 Genbank gene 261 461 . + . ID=gene-D8M40_12700;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=D8M40_12700 RBME01000207.1 Protein Homology CDS 261 461 . + 0 ID=cds-RUP82195.1;Parent=gene-D8M40_12700;Dbxref=NCBI_GP:RUP82195.1;Name=RUP82195.1;gbkey=CDS;gene=iscX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010207906.1;locus_tag=D8M40_12700;product=Fe-S assembly protein IscX;protein_id=RUP82195.1;transl_table=11 RBME01000207.1 Genbank gene 553 745 . + . ID=gene-D8M40_12705;Name=D8M40_12705;end_range=745,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12705;partial=true RBME01000207.1 Protein Homology CDS 553 745 . + 0 ID=cds-RUP82196.1;Parent=gene-D8M40_12705;Dbxref=NCBI_GP:RUP82196.1;Name=RUP82196.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;end_range=745,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_791256.1;locus_tag=D8M40_12705;partial=true;product=nucleoside-diphosphate kinase;protein_id=RUP82196.1;transl_table=11 ##sequence-region RBME01000208.1 1 743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000208.1 Genbank region 1 743 . + . ID=RBME01000208.1:1..743;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000208.1 Genbank gene 1 743 . - . ID=gene-D8M40_12710;Name=D8M40_12710;end_range=743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12710;partial=true;start_range=.,1 RBME01000208.1 Protein Homology CDS 1 743 . - 0 ID=cds-RUP82088.1;Parent=gene-D8M40_12710;Dbxref=NCBI_GP:RUP82088.1;Name=RUP82088.1;end_range=743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008431603.1;locus_tag=D8M40_12710;partial=true;product=TonB-dependent receptor;protein_id=RUP82088.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000209.1 1 742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000209.1 Genbank region 1 742 . + . ID=RBME01000209.1:1..742;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000209.1 Genbank gene 1 285 . - . ID=gene-D8M40_12715;Name=D8M40_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12715;partial=true;start_range=.,1 RBME01000209.1 Protein Homology CDS 1 285 . - 0 ID=cds-RUP82086.1;Parent=gene-D8M40_12715;Dbxref=NCBI_GP:RUP82086.1;Name=RUP82086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253692.1;locus_tag=D8M40_12715;partial=true;product=class V aminotransferase;protein_id=RUP82086.1;start_range=.,1;transl_table=11 RBME01000209.1 Genbank gene 295 531 . - . ID=gene-D8M40_12720;Name=D8M40_12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12720 RBME01000209.1 Protein Homology CDS 295 531 . - 0 ID=cds-RUP82087.1;Parent=gene-D8M40_12720;Dbxref=NCBI_GP:RUP82087.1;Name=RUP82087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003213031.1;locus_tag=D8M40_12720;product=hypothetical protein;protein_id=RUP82087.1;transl_table=11 ##sequence-region RBME01000020.1 1 32324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000020.1 Genbank region 1 32324 . + . ID=RBME01000020.1:1..32324;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000020.1 Genbank gene 303 1511 . + . ID=gene-D8M40_10750;Name=D8M40_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10750 RBME01000020.1 Protein Homology CDS 303 1511 . + 0 ID=cds-RUP87006.1;Parent=gene-D8M40_10750;Dbxref=NCBI_GP:RUP87006.1;Name=RUP87006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600262.1;locus_tag=D8M40_10750;product=IS110 family transposase;protein_id=RUP87006.1;transl_table=11 RBME01000020.1 Genbank gene 2055 2876 . - . ID=gene-D8M40_10755;Name=D8M40_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10755 RBME01000020.1 Protein Homology CDS 2055 2876 . - 0 ID=cds-RUP87007.1;Parent=gene-D8M40_10755;Dbxref=NCBI_GP:RUP87007.1;Name=RUP87007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303356.1;locus_tag=D8M40_10755;product=ABC transporter permease;protein_id=RUP87007.1;transl_table=11 RBME01000020.1 Genbank gene 2869 3630 . - . ID=gene-D8M40_10760;Name=D8M40_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10760 RBME01000020.1 Protein Homology CDS 2869 3630 . - 0 ID=cds-RUP87008.1;Parent=gene-D8M40_10760;Dbxref=NCBI_GP:RUP87008.1;Name=RUP87008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303357.1;locus_tag=D8M40_10760;product=multidrug ABC transporter permease;protein_id=RUP87008.1;transl_table=11 RBME01000020.1 Genbank gene 3627 4691 . - . ID=gene-D8M40_10765;Name=D8M40_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10765 RBME01000020.1 Protein Homology CDS 3627 4691 . - 0 ID=cds-RUP87009.1;Parent=gene-D8M40_10765;Dbxref=NCBI_GP:RUP87009.1;Name=RUP87009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303358.1;locus_tag=D8M40_10765;product=ATP-binding cassette domain-containing protein;protein_id=RUP87009.1;transl_table=11 RBME01000020.1 Genbank gene 5103 5732 . + . ID=gene-D8M40_10770;Name=D8M40_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10770 RBME01000020.1 Protein Homology CDS 5103 5732 . + 0 ID=cds-RUP87010.1;Parent=gene-D8M40_10770;Dbxref=NCBI_GP:RUP87010.1;Name=RUP87010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303359.1;locus_tag=D8M40_10770;product=sugar O-acetyltransferase;protein_id=RUP87010.1;transl_table=11 RBME01000020.1 Genbank gene 5779 6957 . + . ID=gene-D8M40_10775;Name=D8M40_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10775 RBME01000020.1 Protein Homology CDS 5779 6957 . + 0 ID=cds-RUP87022.1;Parent=gene-D8M40_10775;Dbxref=NCBI_GP:RUP87022.1;Name=RUP87022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303360.1;locus_tag=D8M40_10775;product=glycosyltransferase;protein_id=RUP87022.1;transl_table=11 RBME01000020.1 Genbank gene 6990 7739 . + . ID=gene-D8M40_10780;Name=D8M40_10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10780 RBME01000020.1 Protein Homology CDS 6990 7739 . + 0 ID=cds-RUP87023.1;Parent=gene-D8M40_10780;Dbxref=NCBI_GP:RUP87023.1;Name=RUP87023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303361.1;locus_tag=D8M40_10780;product=thioesterase;protein_id=RUP87023.1;transl_table=11 RBME01000020.1 Genbank gene 7767 9533 . + . ID=gene-D8M40_10785;Name=D8M40_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10785 RBME01000020.1 Protein Homology CDS 7767 9533 . + 0 ID=cds-RUP87011.1;Parent=gene-D8M40_10785;Dbxref=NCBI_GP:RUP87011.1;Name=RUP87011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307393.1;locus_tag=D8M40_10785;product=ABC transporter ATP-binding protein;protein_id=RUP87011.1;transl_table=11 RBME01000020.1 Genbank gene 9533 11257 . + . ID=gene-D8M40_10790;Name=D8M40_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10790 RBME01000020.1 Protein Homology CDS 9533 11257 . + 0 ID=cds-RUP87012.1;Parent=gene-D8M40_10790;Dbxref=NCBI_GP:RUP87012.1;Name=RUP87012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307392.1;locus_tag=D8M40_10790;product=ABC transporter ATP-binding protein;protein_id=RUP87012.1;transl_table=11 RBME01000020.1 Genbank gene 11261 12739 . - . ID=gene-D8M40_10795;Name=D8M40_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10795 RBME01000020.1 Protein Homology CDS 11261 12739 . - 0 ID=cds-RUP87013.1;Parent=gene-D8M40_10795;Dbxref=NCBI_GP:RUP87013.1;Name=RUP87013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317158.1;locus_tag=D8M40_10795;product=ATP-binding cassette domain-containing protein;protein_id=RUP87013.1;transl_table=11 RBME01000020.1 Genbank gene 12736 13482 . - . ID=gene-D8M40_10800;Name=D8M40_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10800 RBME01000020.1 Protein Homology CDS 12736 13482 . - 0 ID=cds-RUP87014.1;Parent=gene-D8M40_10800;Dbxref=NCBI_GP:RUP87014.1;Name=RUP87014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303365.1;locus_tag=D8M40_10800;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RUP87014.1;transl_table=11 RBME01000020.1 Genbank gene 13482 14108 . - . ID=gene-D8M40_10805;Name=D8M40_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10805 RBME01000020.1 Protein Homology CDS 13482 14108 . - 0 ID=cds-RUP87015.1;Parent=gene-D8M40_10805;Dbxref=NCBI_GP:RUP87015.1;Name=RUP87015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303366.1;locus_tag=D8M40_10805;product=Trep_Strep domain-containing protein;protein_id=RUP87015.1;transl_table=11 RBME01000020.1 Genbank gene 14200 21771 . - . ID=gene-D8M40_10810;Name=D8M40_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10810 RBME01000020.1 Protein Homology CDS 14200 21771 . - 0 ID=cds-RUP87016.1;Parent=gene-D8M40_10810;Dbxref=NCBI_GP:RUP87016.1;Name=RUP87016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319403.1;locus_tag=D8M40_10810;product=amino acid adenylation domain-containing protein;protein_id=RUP87016.1;transl_table=11 RBME01000020.1 Genbank gene 21784 23415 . - . ID=gene-D8M40_10815;Name=D8M40_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10815 RBME01000020.1 Protein Homology CDS 21784 23415 . - 0 ID=cds-RUP87017.1;Parent=gene-D8M40_10815;Dbxref=NCBI_GP:RUP87017.1;Name=RUP87017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307389.1;locus_tag=D8M40_10815;product=adenylate synthase;protein_id=RUP87017.1;transl_table=11 RBME01000020.1 Genbank gene 23412 24020 . - . ID=gene-D8M40_10820;Name=D8M40_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10820 RBME01000020.1 Protein Homology CDS 23412 24020 . - 0 ID=cds-RUP87018.1;Parent=gene-D8M40_10820;Dbxref=NCBI_GP:RUP87018.1;Name=RUP87018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303369.1;locus_tag=D8M40_10820;product=VOC family protein;protein_id=RUP87018.1;transl_table=11 RBME01000020.1 Genbank gene 24013 29547 . - . ID=gene-D8M40_10825;Name=D8M40_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10825 RBME01000020.1 Protein Homology CDS 24013 29547 . - 0 ID=cds-RUP87019.1;Parent=gene-D8M40_10825;Dbxref=NCBI_GP:RUP87019.1;Name=RUP87019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319401.1;locus_tag=D8M40_10825;product=non-ribosomal peptide synthetase;protein_id=RUP87019.1;transl_table=11 RBME01000020.1 Genbank gene 29529 30674 . - . ID=gene-D8M40_10830;Name=D8M40_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10830 RBME01000020.1 Protein Homology CDS 29529 30674 . - 0 ID=cds-RUP87020.1;Parent=gene-D8M40_10830;Dbxref=NCBI_GP:RUP87020.1;Name=RUP87020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307387.1;locus_tag=D8M40_10830;product=thiazolinyl imide reductase;protein_id=RUP87020.1;transl_table=11 RBME01000020.1 Genbank gene 30717 31799 . - . ID=gene-D8M40_10835;Name=D8M40_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10835 RBME01000020.1 Protein Homology CDS 30717 31799 . - 0 ID=cds-RUP87021.1;Parent=gene-D8M40_10835;Dbxref=NCBI_GP:RUP87021.1;Name=RUP87021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307386.1;locus_tag=D8M40_10835;product=DtxR family transcriptional regulator;protein_id=RUP87021.1;transl_table=11 ##sequence-region RBME01000210.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000210.1 Genbank region 1 741 . + . ID=RBME01000210.1:1..741;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000210.1 Genbank gene 1 544 . + . ID=gene-D8M40_12725;Name=D8M40_12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12725;partial=true;start_range=.,1 RBME01000210.1 Protein Homology CDS 1 544 . + 1 ID=cds-RUP82050.1;Parent=gene-D8M40_12725;Dbxref=NCBI_GP:RUP82050.1;Name=RUP82050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003172365.1;locus_tag=D8M40_12725;partial=true;product=hypothetical protein;protein_id=RUP82050.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000211.1 1 740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000211.1 Genbank region 1 740 . + . ID=RBME01000211.1:1..740;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000211.1 Genbank gene 213 740 . + . ID=gene-D8M40_12730;Name=D8M40_12730;end_range=740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12730;partial=true RBME01000211.1 Protein Homology CDS 213 740 . + 0 ID=cds-RUP82049.1;Parent=gene-D8M40_12730;Dbxref=NCBI_GP:RUP82049.1;Name=RUP82049.1;end_range=740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003213168.1;locus_tag=D8M40_12730;partial=true;product=glutamate--cysteine ligase;protein_id=RUP82049.1;transl_table=11 ##sequence-region RBME01000212.1 1 739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000212.1 Genbank region 1 739 . + . ID=RBME01000212.1:1..739;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000212.1 Genbank gene 1 739 . - . ID=gene-D8M40_12735;Name=D8M40_12735;end_range=739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12735;partial=true;start_range=.,1 RBME01000212.1 Protein Homology CDS 1 739 . - 1 ID=cds-RUP82022.1;Parent=gene-D8M40_12735;Dbxref=NCBI_GP:RUP82022.1;Name=RUP82022.1;end_range=739,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705020.1;locus_tag=D8M40_12735;partial=true;product=aldehyde dehydrogenase family protein;protein_id=RUP82022.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000213.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000213.1 Genbank region 1 737 . + . ID=RBME01000213.1:1..737;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000213.1 Genbank gene 1 209 . - . ID=gene-D8M40_12740;Name=D8M40_12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12740;partial=true;start_range=.,1 RBME01000213.1 Protein Homology CDS 1 209 . - 0 ID=cds-RUP81839.1;Parent=gene-D8M40_12740;Dbxref=NCBI_GP:RUP81839.1;Name=RUP81839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017849837.1;locus_tag=D8M40_12740;partial=true;product=glycosyl transferase;protein_id=RUP81839.1;start_range=.,1;transl_table=11 RBME01000213.1 Genbank gene 206 737 . - . ID=gene-D8M40_12745;Name=D8M40_12745;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12745;partial=true RBME01000213.1 Protein Homology CDS 206 737 . - 1 ID=cds-RUP81840.1;Parent=gene-D8M40_12745;Dbxref=NCBI_GP:RUP81840.1;Name=RUP81840.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008439215.1;locus_tag=D8M40_12745;partial=true;product=glycosyltransferase family 2 protein;protein_id=RUP81840.1;transl_table=11 ##sequence-region RBME01000214.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000214.1 Genbank region 1 737 . + . ID=RBME01000214.1:1..737;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000214.1 Genbank gene 198 737 . + . ID=gene-D8M40_12750;Name=D8M40_12750;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12750;partial=true RBME01000214.1 Protein Homology CDS 198 737 . + 0 ID=cds-RUP81813.1;Parent=gene-D8M40_12750;Dbxref=NCBI_GP:RUP81813.1;Name=RUP81813.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014718697.1;locus_tag=D8M40_12750;partial=true;product=glycosyltransferase;protein_id=RUP81813.1;transl_table=11 ##sequence-region RBME01000215.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000215.1 Genbank region 1 737 . + . ID=RBME01000215.1:1..737;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000215.1 Genbank gene 1 737 . + . ID=gene-D8M40_12755;Name=D8M40_12755;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12755;partial=true;start_range=.,1 RBME01000215.1 Protein Homology CDS 1 737 . + 2 ID=cds-RUP81812.1;Parent=gene-D8M40_12755;Dbxref=NCBI_GP:RUP81812.1;Name=RUP81812.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_793603.1;locus_tag=D8M40_12755;partial=true;product=beta-ketoacyl-ACP synthase II;protein_id=RUP81812.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000216.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000216.1 Genbank region 1 737 . + . ID=RBME01000216.1:1..737;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000216.1 Genbank gene 1 427 . + . ID=gene-D8M40_12760;Name=D8M40_12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12760;partial=true;start_range=.,1 RBME01000216.1 Protein Homology CDS 1 427 . + 1 ID=cds-RUP81782.1;Parent=gene-D8M40_12760;Dbxref=NCBI_GP:RUP81782.1;Name=RUP81782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010565666.1;locus_tag=D8M40_12760;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP81782.1;start_range=.,1;transl_table=11 RBME01000216.1 Genbank gene 446 737 . - . ID=gene-D8M40_12765;Name=D8M40_12765;end_range=737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12765;partial=true RBME01000216.1 Protein Homology CDS 446 737 . - 1 ID=cds-RUP81783.1;Parent=gene-D8M40_12765;Dbxref=NCBI_GP:RUP81783.1;Name=RUP81783.1;end_range=737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016974224.1;locus_tag=D8M40_12765;partial=true;product=YkgJ family cysteine cluster protein;protein_id=RUP81783.1;transl_table=11 ##sequence-region RBME01000217.1 1 736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000217.1 Genbank region 1 736 . + . ID=RBME01000217.1:1..736;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000217.1 Genbank pseudogene 1 736 . + . ID=gene-D8M40_12770;Name=D8M40_12770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12770;pseudo=true RBME01000217.1 Protein Homology CDS 1 736 . + 0 ID=cds-D8M40_12770;Parent=gene-D8M40_12770;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007896812.1;locus_tag=D8M40_12770;product=potassium channel protein;pseudo=true;transl_table=11 ##sequence-region RBME01000218.1 1 736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000218.1 Genbank region 1 736 . + . ID=RBME01000218.1:1..736;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000218.1 Genbank gene 1 601 . + . ID=gene-D8M40_12775;Name=D8M40_12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12775;partial=true;start_range=.,1 RBME01000218.1 GeneMarkS+ CDS 1 601 . + 1 ID=cds-RUP81781.1;Parent=gene-D8M40_12775;Dbxref=NCBI_GP:RUP81781.1;Name=RUP81781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12775;partial=true;product=SGNH/GDSL hydrolase family protein;protein_id=RUP81781.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000219.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000219.1 Genbank region 1 735 . + . ID=RBME01000219.1:1..735;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000219.1 Genbank gene 1 735 . - . ID=gene-D8M40_12780;Name=D8M40_12780;end_range=735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12780;partial=true;start_range=.,1 RBME01000219.1 Protein Homology CDS 1 735 . - 1 ID=cds-RUP81780.1;Parent=gene-D8M40_12780;Dbxref=NCBI_GP:RUP81780.1;Name=RUP81780.1;end_range=735,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003220840.1;locus_tag=D8M40_12780;partial=true;product=methyl-accepting chemotaxis protein;protein_id=RUP81780.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000021.1 1 25519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000021.1 Genbank region 1 25519 . + . ID=RBME01000021.1:1..25519;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000021.1 Genbank gene 1 97 . + . ID=gene-D8M40_10840;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M40_10840;partial=true;start_range=.,1 RBME01000021.1 cmsearch rRNA 1 97 . + . ID=rna-D8M40_10840;Parent=gene-D8M40_10840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_10840;partial=true;product=5S ribosomal RNA;start_range=.,1 RBME01000021.1 cmsearch exon 1 97 . + . ID=exon-D8M40_10840-1;Parent=rna-D8M40_10840;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_10840;partial=true;product=5S ribosomal RNA;start_range=.,1 RBME01000021.1 Genbank gene 252 1187 . + . ID=gene-D8M40_10845;Name=D8M40_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10845 RBME01000021.1 Protein Homology CDS 252 1187 . + 0 ID=cds-RUP86977.1;Parent=gene-D8M40_10845;Dbxref=NCBI_GP:RUP86977.1;Name=RUP86977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00494.17;locus_tag=D8M40_10845;product=phytoene/squalene synthase family protein;protein_id=RUP86977.1;transl_table=11 RBME01000021.1 Genbank gene 1184 2893 . + . ID=gene-D8M40_10850;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=protein_coding;locus_tag=D8M40_10850 RBME01000021.1 Protein Homology CDS 1184 2893 . + 0 ID=cds-RUP86978.1;Parent=gene-D8M40_10850;Dbxref=NCBI_GP:RUP86978.1;Name=RUP86978.1;gbkey=CDS;gene=crtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121624.1;locus_tag=D8M40_10850;product=phytoene desaturase;protein_id=RUP86978.1;transl_table=11 RBME01000021.1 Genbank gene 2933 3937 . - . ID=gene-D8M40_10855;Name=D8M40_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10855 RBME01000021.1 Protein Homology CDS 2933 3937 . - 0 ID=cds-RUP86979.1;Parent=gene-D8M40_10855;Dbxref=NCBI_GP:RUP86979.1;Name=RUP86979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279662.1;locus_tag=D8M40_10855;product=23S rRNA pseudouridylate synthase;protein_id=RUP86979.1;transl_table=11 RBME01000021.1 Genbank gene 4336 5232 . + . ID=gene-D8M40_10860;Name=D8M40_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10860 RBME01000021.1 Protein Homology CDS 4336 5232 . + 0 ID=cds-RUP86980.1;Parent=gene-D8M40_10860;Dbxref=NCBI_GP:RUP86980.1;Name=RUP86980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188456.1;locus_tag=D8M40_10860;product=universal stress protein;protein_id=RUP86980.1;transl_table=11 RBME01000021.1 Genbank gene 5236 5493 . + . ID=gene-D8M40_10865;Name=D8M40_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10865 RBME01000021.1 Protein Homology CDS 5236 5493 . + 0 ID=cds-RUP86981.1;Parent=gene-D8M40_10865;Dbxref=NCBI_GP:RUP86981.1;Name=RUP86981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018326.1;locus_tag=D8M40_10865;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=RUP86981.1;transl_table=11 RBME01000021.1 Genbank gene 5687 6313 . + . ID=gene-D8M40_10870;Name=D8M40_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10870 RBME01000021.1 Protein Homology CDS 5687 6313 . + 0 ID=cds-RUP86982.1;Parent=gene-D8M40_10870;Dbxref=NCBI_GP:RUP86982.1;Name=RUP86982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005285355.1;locus_tag=D8M40_10870;product=TetR/AcrR family transcriptional regulator;protein_id=RUP86982.1;transl_table=11 RBME01000021.1 Genbank gene 6310 7599 . - . ID=gene-D8M40_10875;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D8M40_10875 RBME01000021.1 Protein Homology CDS 6310 7599 . - 0 ID=cds-RUP86983.1;Parent=gene-D8M40_10875;Dbxref=NCBI_GP:RUP86983.1;Name=RUP86983.1;gbkey=CDS;gene=yidC;inference=COORDINATES: protein motif:HMM:TIGR03592;locus_tag=D8M40_10875;product=membrane protein insertase YidC;protein_id=RUP86983.1;transl_table=11 RBME01000021.1 Genbank gene 7709 9001 . + . ID=gene-D8M40_10880;Name=D8M40_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10880 RBME01000021.1 Protein Homology CDS 7709 9001 . + 0 ID=cds-RUP86984.1;Parent=gene-D8M40_10880;Dbxref=NCBI_GP:RUP86984.1;Name=RUP86984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121631.1;locus_tag=D8M40_10880;product=sensor histidine kinase;protein_id=RUP86984.1;transl_table=11 RBME01000021.1 Genbank gene 9055 9693 . + . ID=gene-D8M40_10885;Name=D8M40_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10885 RBME01000021.1 Protein Homology CDS 9055 9693 . + 0 ID=cds-RUP86985.1;Parent=gene-D8M40_10885;Dbxref=NCBI_GP:RUP86985.1;Name=RUP86985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402079.1;locus_tag=D8M40_10885;product=DNA-binding response regulator;protein_id=RUP86985.1;transl_table=11 RBME01000021.1 Genbank gene 9713 10348 . - . ID=gene-D8M40_10890;Name=D8M40_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10890 RBME01000021.1 Protein Homology CDS 9713 10348 . - 0 ID=cds-RUP86986.1;Parent=gene-D8M40_10890;Dbxref=NCBI_GP:RUP86986.1;Name=RUP86986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121633.1;locus_tag=D8M40_10890;product=hypothetical protein;protein_id=RUP86986.1;transl_table=11 RBME01000021.1 Genbank gene 10435 12096 . + . ID=gene-D8M40_10895;Name=D8M40_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10895 RBME01000021.1 Protein Homology CDS 10435 12096 . + 0 ID=cds-RUP86987.1;Parent=gene-D8M40_10895;Dbxref=NCBI_GP:RUP86987.1;Name=RUP86987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121634.1;locus_tag=D8M40_10895;product=TM0106 family RecB-like putative nuclease;protein_id=RUP86987.1;transl_table=11 RBME01000021.1 Genbank gene 12093 13301 . - . ID=gene-D8M40_10900;Name=D8M40_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10900 RBME01000021.1 Protein Homology CDS 12093 13301 . - 0 ID=cds-RUP86988.1;Parent=gene-D8M40_10900;Dbxref=NCBI_GP:RUP86988.1;Name=RUP86988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022011.1;locus_tag=D8M40_10900;product=MFS transporter;protein_id=RUP86988.1;transl_table=11 RBME01000021.1 Genbank gene 13373 13774 . + . ID=gene-D8M40_10905;Name=D8M40_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10905 RBME01000021.1 Protein Homology CDS 13373 13774 . + 0 ID=cds-RUP86989.1;Parent=gene-D8M40_10905;Dbxref=NCBI_GP:RUP86989.1;Name=RUP86989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283268.1;locus_tag=D8M40_10905;product=hypothetical protein;protein_id=RUP86989.1;transl_table=11 RBME01000021.1 Genbank gene 13920 14522 . - . ID=gene-D8M40_10910;Name=D8M40_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10910 RBME01000021.1 Protein Homology CDS 13920 14522 . - 0 ID=cds-RUP86990.1;Parent=gene-D8M40_10910;Dbxref=NCBI_GP:RUP86990.1;Name=RUP86990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822499.1;locus_tag=D8M40_10910;product=superoxide dismutase;protein_id=RUP86990.1;transl_table=11 RBME01000021.1 Genbank gene 14711 15373 . + . ID=gene-D8M40_10915;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=D8M40_10915 RBME01000021.1 Protein Homology CDS 14711 15373 . + 0 ID=cds-RUP86991.1;Parent=gene-D8M40_10915;Dbxref=NCBI_GP:RUP86991.1;Name=RUP86991.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121638.1;locus_tag=D8M40_10915;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=RUP86991.1;transl_table=11 RBME01000021.1 Genbank gene 15409 16137 . + . ID=gene-D8M40_10920;Name=D8M40_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10920 RBME01000021.1 Protein Homology CDS 15409 16137 . + 0 ID=cds-RUP86992.1;Parent=gene-D8M40_10920;Dbxref=NCBI_GP:RUP86992.1;Name=RUP86992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121639.1;locus_tag=D8M40_10920;product=glycerophosphodiester phosphodiesterase;protein_id=RUP86992.1;transl_table=11 RBME01000021.1 Genbank gene 16148 17068 . + . ID=gene-D8M40_10925;Name=D8M40_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10925 RBME01000021.1 Protein Homology CDS 16148 17068 . + 0 ID=cds-RUP86993.1;Parent=gene-D8M40_10925;Dbxref=NCBI_GP:RUP86993.1;Name=RUP86993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188492.1;locus_tag=D8M40_10925;product=preprotein translocase subunit SecA;protein_id=RUP86993.1;transl_table=11 RBME01000021.1 Genbank pseudogene 17343 18687 . + . ID=gene-D8M40_10930;Name=D8M40_10930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10930;pseudo=true RBME01000021.1 Protein Homology CDS 17343 18687 . + 0 ID=cds-D8M40_10930;Parent=gene-D8M40_10930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M40_10930;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000021.1 Genbank gene 19030 19719 . + . ID=gene-D8M40_10935;Name=D8M40_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10935 RBME01000021.1 GeneMarkS+ CDS 19030 19719 . + 0 ID=cds-RUP86994.1;Parent=gene-D8M40_10935;Dbxref=NCBI_GP:RUP86994.1;Name=RUP86994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_10935;product=hypothetical protein;protein_id=RUP86994.1;transl_table=11 RBME01000021.1 Genbank gene 19763 20329 . + . ID=gene-D8M40_10940;Name=D8M40_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10940 RBME01000021.1 Protein Homology CDS 19763 20329 . + 0 ID=cds-RUP86995.1;Parent=gene-D8M40_10940;Dbxref=NCBI_GP:RUP86995.1;Name=RUP86995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04034;locus_tag=D8M40_10940;product=SdpA family antimicrobial peptide system protein;protein_id=RUP86995.1;transl_table=11 RBME01000021.1 Genbank gene 20322 21257 . + . ID=gene-D8M40_10945;Name=D8M40_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10945 RBME01000021.1 Protein Homology CDS 20322 21257 . + 0 ID=cds-RUP86996.1;Parent=gene-D8M40_10945;Dbxref=NCBI_GP:RUP86996.1;Name=RUP86996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04033;locus_tag=D8M40_10945;product=hypothetical protein;protein_id=RUP86996.1;transl_table=11 RBME01000021.1 Genbank gene 21261 21665 . + . ID=gene-D8M40_10950;Name=D8M40_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10950 RBME01000021.1 Protein Homology CDS 21261 21665 . + 0 ID=cds-RUP86997.1;Parent=gene-D8M40_10950;Dbxref=NCBI_GP:RUP86997.1;Name=RUP86997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13630.4;locus_tag=D8M40_10950;product=SdpI family protein;protein_id=RUP86997.1;transl_table=11 RBME01000021.1 Genbank pseudogene 22558 22833 . + . ID=gene-D8M40_10955;Name=D8M40_10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10955;pseudo=true RBME01000021.1 Protein Homology CDS 22558 22833 . + 0 ID=cds-D8M40_10955;Parent=gene-D8M40_10955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M40_10955;product=transposase;pseudo=true;transl_table=11 RBME01000021.1 Genbank gene 23145 23735 . + . ID=gene-D8M40_10960;Name=D8M40_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10960 RBME01000021.1 Protein Homology CDS 23145 23735 . + 0 ID=cds-RUP86998.1;Parent=gene-D8M40_10960;Dbxref=NCBI_GP:RUP86998.1;Name=RUP86998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02796.13;locus_tag=D8M40_10960;product=hypothetical protein;protein_id=RUP86998.1;transl_table=11 RBME01000021.1 Genbank gene 23683 24270 . + . ID=gene-D8M40_10965;Name=D8M40_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10965 RBME01000021.1 Protein Homology CDS 23683 24270 . + 0 ID=cds-RUP86999.1;Parent=gene-D8M40_10965;Dbxref=NCBI_GP:RUP86999.1;Name=RUP86999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M40_10965;product=hypothetical protein;protein_id=RUP86999.1;transl_table=11 RBME01000021.1 Genbank gene 24267 25064 . + . ID=gene-D8M40_10970;Name=D8M40_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10970 RBME01000021.1 Protein Homology CDS 24267 25064 . + 0 ID=cds-RUP87000.1;Parent=gene-D8M40_10970;Dbxref=NCBI_GP:RUP87000.1;Name=RUP87000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121573.1;locus_tag=D8M40_10970;product=DNA replication protein;protein_id=RUP87000.1;transl_table=11 RBME01000021.1 Genbank gene 25056 25367 . - . ID=gene-D8M40_10975;Name=D8M40_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10975 RBME01000021.1 Protein Homology CDS 25056 25367 . - 0 ID=cds-RUP87001.1;Parent=gene-D8M40_10975;Dbxref=NCBI_GP:RUP87001.1;Name=RUP87001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M40_10975;product=hypothetical protein;protein_id=RUP87001.1;transl_table=11 ##sequence-region RBME01000220.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000220.1 Genbank region 1 735 . + . ID=RBME01000220.1:1..735;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000220.1 Genbank gene 114 735 . - . ID=gene-D8M40_12785;Name=D8M40_12785;end_range=735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12785;partial=true RBME01000220.1 GeneMarkS+ CDS 114 735 . - 1 ID=cds-RUP81539.1;Parent=gene-D8M40_12785;Dbxref=NCBI_GP:RUP81539.1;Name=RUP81539.1;end_range=735,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12785;partial=true;product=hypothetical protein;protein_id=RUP81539.1;transl_table=11 ##sequence-region RBME01000221.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000221.1 Genbank region 1 734 . + . ID=RBME01000221.1:1..734;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 ##sequence-region RBME01000222.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000222.1 Genbank region 1 734 . + . ID=RBME01000222.1:1..734;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000222.1 Genbank gene 1 734 . - . ID=gene-D8M40_12790;Name=D8M40_12790;end_range=734,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12790;partial=true;start_range=.,1 RBME01000222.1 Protein Homology CDS 1 734 . - 1 ID=cds-RUP81538.1;Parent=gene-D8M40_12790;Dbxref=NCBI_GP:RUP81538.1;Name=RUP81538.1;end_range=734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017134467.1;locus_tag=D8M40_12790;partial=true;product=TonB-dependent receptor;protein_id=RUP81538.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000223.1 1 732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000223.1 Genbank region 1 732 . + . ID=RBME01000223.1:1..732;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000223.1 Genbank gene 1 732 . - . ID=gene-D8M40_12795;Name=D8M40_12795;end_range=732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12795;partial=true;start_range=.,1 RBME01000223.1 Protein Homology CDS 1 732 . - 2 ID=cds-RUP81514.1;Parent=gene-D8M40_12795;Dbxref=NCBI_GP:RUP81514.1;Name=RUP81514.1;end_range=732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005792500.1;locus_tag=D8M40_12795;partial=true;product=ABC transporter permease;protein_id=RUP81514.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000224.1 1 732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000224.1 Genbank region 1 732 . + . ID=RBME01000224.1:1..732;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000224.1 Genbank gene 1 172 . - . ID=gene-D8M40_12800;Name=D8M40_12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12800;partial=true;start_range=.,1 RBME01000224.1 Protein Homology CDS 1 172 . - 0 ID=cds-RUP81512.1;Parent=gene-D8M40_12800;Dbxref=NCBI_GP:RUP81512.1;Name=RUP81512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014719218.1;locus_tag=D8M40_12800;partial=true;product=GlxA family transcriptional regulator;protein_id=RUP81512.1;start_range=.,1;transl_table=11 RBME01000224.1 Genbank gene 175 717 . - . ID=gene-D8M40_12805;Name=D8M40_12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12805 RBME01000224.1 Protein Homology CDS 175 717 . - 0 ID=cds-RUP81513.1;Parent=gene-D8M40_12805;Dbxref=NCBI_GP:RUP81513.1;Name=RUP81513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017256264.1;locus_tag=D8M40_12805;product=isochorismatase family protein;protein_id=RUP81513.1;transl_table=11 ##sequence-region RBME01000225.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000225.1 Genbank region 1 730 . + . ID=RBME01000225.1:1..730;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000225.1 Genbank gene 1 652 . - . ID=gene-D8M40_12810;Name=D8M40_12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12810;partial=true;start_range=.,1 RBME01000225.1 Protein Homology CDS 1 652 . - 0 ID=cds-RUP81488.1;Parent=gene-D8M40_12810;Dbxref=NCBI_GP:RUP81488.1;Name=RUP81488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_236943.1;locus_tag=D8M40_12810;partial=true;product=ABC transporter permease;protein_id=RUP81488.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000226.1 1 727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000226.1 Genbank region 1 727 . + . ID=RBME01000226.1:1..727;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000226.1 Genbank gene 186 727 . - . ID=gene-D8M40_12815;Name=D8M40_12815;end_range=727,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12815;partial=true RBME01000226.1 Protein Homology CDS 186 727 . - 2 ID=cds-RUP81425.1;Parent=gene-D8M40_12815;Dbxref=NCBI_GP:RUP81425.1;Name=RUP81425.1;end_range=727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016974623.1;locus_tag=D8M40_12815;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP81425.1;transl_table=11 ##sequence-region RBME01000227.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000227.1 Genbank region 1 726 . + . ID=RBME01000227.1:1..726;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000227.1 Genbank gene 1 282 . - . ID=gene-D8M40_12820;Name=D8M40_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12820;partial=true;start_range=.,1 RBME01000227.1 Protein Homology CDS 1 282 . - 0 ID=cds-RUP81423.1;Parent=gene-D8M40_12820;Dbxref=NCBI_GP:RUP81423.1;Name=RUP81423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003439482.1;locus_tag=D8M40_12820;partial=true;product=hydroxyproline-2-epimerase;protein_id=RUP81423.1;start_range=.,1;transl_table=11 RBME01000227.1 Genbank gene 294 726 . - . ID=gene-D8M40_12825;Name=D8M40_12825;end_range=726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12825;partial=true RBME01000227.1 Protein Homology CDS 294 726 . - 1 ID=cds-RUP81424.1;Parent=gene-D8M40_12825;Dbxref=NCBI_GP:RUP81424.1;Name=RUP81424.1;end_range=726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017138871.1;locus_tag=D8M40_12825;partial=true;product=aspartate:proton symporter;protein_id=RUP81424.1;transl_table=11 ##sequence-region RBME01000228.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000228.1 Genbank region 1 724 . + . ID=RBME01000228.1:1..724;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000228.1 Genbank gene 1 613 . + . ID=gene-D8M40_12830;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=D8M40_12830;partial=true;start_range=.,1 RBME01000228.1 Protein Homology CDS 1 613 . + 1 ID=cds-RUP81400.1;Parent=gene-D8M40_12830;Dbxref=NCBI_GP:RUP81400.1;Name=RUP81400.1;gbkey=CDS;gene=lptB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003313594.1;locus_tag=D8M40_12830;partial=true;product=LPS export ABC transporter ATP-binding protein;protein_id=RUP81400.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000229.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000229.1 Genbank region 1 724 . + . ID=RBME01000229.1:1..724;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000229.1 Genbank gene 1 615 . + . ID=gene-D8M40_12835;Name=D8M40_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12835;partial=true;start_range=.,1 RBME01000229.1 Protein Homology CDS 1 615 . + 0 ID=cds-RUP81197.1;Parent=gene-D8M40_12835;Dbxref=NCBI_GP:RUP81197.1;Name=RUP81197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010176012.1;locus_tag=D8M40_12835;partial=true;product=class II fumarate hydratase;protein_id=RUP81197.1;start_range=.,1;transl_table=11 RBME01000229.1 Genbank gene 612 724 . - . ID=gene-D8M40_12840;Name=D8M40_12840;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12840;partial=true RBME01000229.1 Protein Homology CDS 612 724 . - 2 ID=cds-RUP81198.1;Parent=gene-D8M40_12840;Dbxref=NCBI_GP:RUP81198.1;Name=RUP81198.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010567459.1;locus_tag=D8M40_12840;partial=true;product=EamA family transporter;protein_id=RUP81198.1;transl_table=11 ##sequence-region RBME01000022.1 1 24255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000022.1 Genbank region 1 24255 . + . ID=RBME01000022.1:1..24255;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000022.1 Genbank pseudogene 131 637 . + . ID=gene-D8M40_10980;Name=D8M40_10980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10980;pseudo=true RBME01000022.1 Protein Homology CDS 131 637 . + 0 ID=cds-D8M40_10980;Parent=gene-D8M40_10980;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529542.1;locus_tag=D8M40_10980;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 RBME01000022.1 Genbank pseudogene 657 1516 . + . ID=gene-D8M40_10985;Name=D8M40_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_10985;pseudo=true RBME01000022.1 Protein Homology CDS 657 1516 . + 0 ID=cds-D8M40_10985;Parent=gene-D8M40_10985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120567.1;locus_tag=D8M40_10985;product=ABC transporter permease;pseudo=true;transl_table=11 RBME01000022.1 Genbank gene 1533 2696 . + . ID=gene-D8M40_10990;Name=D8M40_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10990 RBME01000022.1 Protein Homology CDS 1533 2696 . + 0 ID=cds-RUP86957.1;Parent=gene-D8M40_10990;Dbxref=NCBI_GP:RUP86957.1;Name=RUP86957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120568.1;locus_tag=D8M40_10990;product=histidine kinase;protein_id=RUP86957.1;transl_table=11 RBME01000022.1 Genbank gene 2693 3316 . + . ID=gene-D8M40_10995;Name=D8M40_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_10995 RBME01000022.1 Protein Homology CDS 2693 3316 . + 0 ID=cds-RUP86958.1;Parent=gene-D8M40_10995;Dbxref=NCBI_GP:RUP86958.1;Name=RUP86958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005285138.1;locus_tag=D8M40_10995;product=DNA-binding response regulator;protein_id=RUP86958.1;transl_table=11 RBME01000022.1 Genbank gene 3884 5548 . + . ID=gene-D8M40_11000;Name=D8M40_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11000 RBME01000022.1 Protein Homology CDS 3884 5548 . + 0 ID=cds-RUP86959.1;Parent=gene-D8M40_11000;Dbxref=NCBI_GP:RUP86959.1;Name=RUP86959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006240229.1;locus_tag=D8M40_11000;product=ABC transporter ATP-binding protein;protein_id=RUP86959.1;transl_table=11 RBME01000022.1 Genbank gene 5561 6160 . + . ID=gene-D8M40_11005;Name=D8M40_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11005 RBME01000022.1 Protein Homology CDS 5561 6160 . + 0 ID=cds-RUP86960.1;Parent=gene-D8M40_11005;Dbxref=NCBI_GP:RUP86960.1;Name=RUP86960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002527554.1;locus_tag=D8M40_11005;product=TetR family transcriptional regulator;protein_id=RUP86960.1;transl_table=11 RBME01000022.1 Genbank gene 6165 7382 . + . ID=gene-D8M40_11010;Name=D8M40_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11010 RBME01000022.1 Protein Homology CDS 6165 7382 . + 0 ID=cds-RUP86961.1;Parent=gene-D8M40_11010;Dbxref=NCBI_GP:RUP86961.1;Name=RUP86961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017596549.1;locus_tag=D8M40_11010;product=MFS transporter;protein_id=RUP86961.1;transl_table=11 RBME01000022.1 Genbank gene 7546 7911 . + . ID=gene-D8M40_11015;Name=D8M40_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11015 RBME01000022.1 Protein Homology CDS 7546 7911 . + 0 ID=cds-RUP86962.1;Parent=gene-D8M40_11015;Dbxref=NCBI_GP:RUP86962.1;Name=RUP86962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120598.1;locus_tag=D8M40_11015;product=hypothetical protein;protein_id=RUP86962.1;transl_table=11 RBME01000022.1 Genbank gene 7966 9426 . + . ID=gene-D8M40_11020;Name=D8M40_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11020 RBME01000022.1 Protein Homology CDS 7966 9426 . + 0 ID=cds-RUP86963.1;Parent=gene-D8M40_11020;Dbxref=NCBI_GP:RUP86963.1;Name=RUP86963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010935632.1;locus_tag=D8M40_11020;product=DUF5129 domain-containing protein;protein_id=RUP86963.1;transl_table=11 RBME01000022.1 Genbank pseudogene 9667 9909 . - . ID=gene-D8M40_11025;Name=D8M40_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11025;pseudo=true RBME01000022.1 Protein Homology CDS 9667 9909 . - 0 ID=cds-D8M40_11025;Parent=gene-D8M40_11025;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013837987.1;locus_tag=D8M40_11025;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000022.1 Genbank gene 9977 11260 . - . ID=gene-D8M40_11030;Name=D8M40_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11030 RBME01000022.1 Protein Homology CDS 9977 11260 . - 0 ID=cds-RUP86964.1;Parent=gene-D8M40_11030;Dbxref=NCBI_GP:RUP86964.1;Name=RUP86964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120601.1;locus_tag=D8M40_11030;product=Na/Pi cotransporter family protein;protein_id=RUP86964.1;transl_table=11 RBME01000022.1 Genbank gene 11468 12391 . - . ID=gene-D8M40_11035;Name=D8M40_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11035 RBME01000022.1 GeneMarkS+ CDS 11468 12391 . - 0 ID=cds-RUP86965.1;Parent=gene-D8M40_11035;Dbxref=NCBI_GP:RUP86965.1;Name=RUP86965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11035;product=hypothetical protein;protein_id=RUP86965.1;transl_table=11 RBME01000022.1 Genbank gene 12430 15219 . - . ID=gene-D8M40_11040;Name=D8M40_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11040 RBME01000022.1 Protein Homology CDS 12430 15219 . - 0 ID=cds-RUP86973.1;Parent=gene-D8M40_11040;Dbxref=NCBI_GP:RUP86973.1;Name=RUP86973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822223.1;locus_tag=D8M40_11040;product=leucine--tRNA ligase;protein_id=RUP86973.1;transl_table=11 RBME01000022.1 Genbank gene 15377 17122 . + . ID=gene-D8M40_11045;Name=D8M40_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11045 RBME01000022.1 Protein Homology CDS 15377 17122 . + 0 ID=cds-RUP86966.1;Parent=gene-D8M40_11045;Dbxref=NCBI_GP:RUP86966.1;Name=RUP86966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188354.1;locus_tag=D8M40_11045;product=alpha-keto acid decarboxylase family protein;protein_id=RUP86966.1;transl_table=11 RBME01000022.1 Genbank gene 17534 18031 . - . ID=gene-D8M40_11050;Name=D8M40_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11050 RBME01000022.1 GeneMarkS+ CDS 17534 18031 . - 0 ID=cds-RUP86967.1;Parent=gene-D8M40_11050;Dbxref=NCBI_GP:RUP86967.1;Name=RUP86967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11050;product=hypothetical protein;protein_id=RUP86967.1;transl_table=11 RBME01000022.1 Genbank gene 18268 19659 . - . ID=gene-D8M40_11055;Name=D8M40_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11055 RBME01000022.1 Protein Homology CDS 18268 19659 . - 0 ID=cds-RUP86974.1;Parent=gene-D8M40_11055;Dbxref=NCBI_GP:RUP86974.1;Name=RUP86974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006334600.1;locus_tag=D8M40_11055;product=aldehyde dehydrogenase family protein;protein_id=RUP86974.1;transl_table=11 RBME01000022.1 Genbank gene 19892 20923 . + . ID=gene-D8M40_11060;Name=D8M40_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11060 RBME01000022.1 Protein Homology CDS 19892 20923 . + 0 ID=cds-RUP86968.1;Parent=gene-D8M40_11060;Dbxref=NCBI_GP:RUP86968.1;Name=RUP86968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120608.1;locus_tag=D8M40_11060;product=LLM class flavin-dependent oxidoreductase;protein_id=RUP86968.1;transl_table=11 RBME01000022.1 Genbank gene 21884 22117 . + . ID=gene-D8M40_11065;Name=D8M40_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11065 RBME01000022.1 GeneMarkS+ CDS 21884 22117 . + 0 ID=cds-RUP86969.1;Parent=gene-D8M40_11065;Dbxref=NCBI_GP:RUP86969.1;Name=RUP86969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11065;product=hypothetical protein;protein_id=RUP86969.1;transl_table=11 RBME01000022.1 Genbank gene 22131 23027 . + . ID=gene-D8M40_11070;Name=D8M40_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11070 RBME01000022.1 Protein Homology CDS 22131 23027 . + 0 ID=cds-RUP86970.1;Parent=gene-D8M40_11070;Dbxref=NCBI_GP:RUP86970.1;Name=RUP86970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=D8M40_11070;product=ATP-binding cassette domain-containing protein;protein_id=RUP86970.1;transl_table=11 RBME01000022.1 Genbank gene 23017 23763 . + . ID=gene-D8M40_11075;Name=D8M40_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11075 RBME01000022.1 GeneMarkS+ CDS 23017 23763 . + 0 ID=cds-RUP86971.1;Parent=gene-D8M40_11075;Dbxref=NCBI_GP:RUP86971.1;Name=RUP86971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11075;product=hypothetical protein;protein_id=RUP86971.1;transl_table=11 RBME01000022.1 Genbank gene 23767 24222 . + . ID=gene-D8M40_11080;Name=D8M40_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11080 RBME01000022.1 GeneMarkS+ CDS 23767 24222 . + 0 ID=cds-RUP86972.1;Parent=gene-D8M40_11080;Dbxref=NCBI_GP:RUP86972.1;Name=RUP86972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11080;product=hypothetical protein;protein_id=RUP86972.1;transl_table=11 ##sequence-region RBME01000230.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000230.1 Genbank region 1 724 . + . ID=RBME01000230.1:1..724;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000230.1 Genbank gene 39 724 . - . ID=gene-D8M40_12845;Name=D8M40_12845;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12845;partial=true RBME01000230.1 Protein Homology CDS 39 724 . - 2 ID=cds-RUP81196.1;Parent=gene-D8M40_12845;Dbxref=NCBI_GP:RUP81196.1;Name=RUP81196.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010565048.1;locus_tag=D8M40_12845;partial=true;product=response regulator;protein_id=RUP81196.1;transl_table=11 ##sequence-region RBME01000231.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000231.1 Genbank region 1 724 . + . ID=RBME01000231.1:1..724;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000231.1 Genbank gene 577 724 . + . ID=gene-D8M40_12850;Name=D8M40_12850;end_range=724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12850;partial=true RBME01000231.1 Protein Homology CDS 577 724 . + 0 ID=cds-RUP81178.1;Parent=gene-D8M40_12850;Dbxref=NCBI_GP:RUP81178.1;Name=RUP81178.1;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019818025.1;locus_tag=D8M40_12850;partial=true;product=ferredoxin--NADP reductase;protein_id=RUP81178.1;transl_table=11 ##sequence-region RBME01000232.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000232.1 Genbank region 1 723 . + . ID=RBME01000232.1:1..723;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000232.1 Genbank gene 1 602 . - . ID=gene-D8M40_12855;Name=D8M40_12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12855;partial=true;start_range=.,1 RBME01000232.1 Protein Homology CDS 1 602 . - 0 ID=cds-RUP81177.1;Parent=gene-D8M40_12855;Dbxref=NCBI_GP:RUP81177.1;Name=RUP81177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008435407.1;locus_tag=D8M40_12855;partial=true;product=LysR family transcriptional regulator;protein_id=RUP81177.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000233.1 1 722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000233.1 Genbank region 1 722 . + . ID=RBME01000233.1:1..722;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000233.1 Genbank gene 1 719 . + . ID=gene-D8M40_12860;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D8M40_12860;partial=true;start_range=.,1 RBME01000233.1 Protein Homology CDS 1 719 . + 2 ID=cds-RUP81158.1;Parent=gene-D8M40_12860;Dbxref=NCBI_GP:RUP81158.1;Name=RUP81158.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_235096.1;locus_tag=D8M40_12860;partial=true;product=branched-chain amino acid transport system II carrier protein;protein_id=RUP81158.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000234.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000234.1 Genbank region 1 720 . + . ID=RBME01000234.1:1..720;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000234.1 Genbank gene 1 545 . + . ID=gene-D8M40_12865;Name=D8M40_12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12865;partial=true;start_range=.,1 RBME01000234.1 Protein Homology CDS 1 545 . + 2 ID=cds-RUP81143.1;Parent=gene-D8M40_12865;Dbxref=NCBI_GP:RUP81143.1;Name=RUP81143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003174347.1;locus_tag=D8M40_12865;partial=true;product=gfo/Idh/MocA family oxidoreductase;protein_id=RUP81143.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000235.1 1 659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000235.1 Genbank region 1 659 . + . ID=RBME01000235.1:1..659;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000235.1 Genbank gene 60 419 . + . ID=gene-D8M40_12870;Name=D8M40_12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12870 RBME01000235.1 Protein Homology CDS 60 419 . + 0 ID=cds-RUP81142.1;Parent=gene-D8M40_12870;Dbxref=NCBI_GP:RUP81142.1;Name=RUP81142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M40_12870;product=hypothetical protein;protein_id=RUP81142.1;transl_table=11 RBME01000235.1 Genbank pseudogene 397 465 . - . ID=gene-D8M40_12875;Name=D8M40_12875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12875;pseudo=true RBME01000235.1 Protein Homology CDS 397 465 . - 0 ID=cds-D8M40_12875;Parent=gene-D8M40_12875;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019727246.1;locus_tag=D8M40_12875;product=QacE family quaternary ammonium compound efflux SMR transporter;pseudo=true;transl_table=11 ##sequence-region RBME01000236.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000236.1 Genbank region 1 651 . + . ID=RBME01000236.1:1..651;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000236.1 Genbank gene 1 651 . - . ID=gene-D8M40_12880;Name=D8M40_12880;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12880;partial=true;start_range=.,1 RBME01000236.1 Protein Homology CDS 1 651 . - 2 ID=cds-RUP81056.1;Parent=gene-D8M40_12880;Dbxref=NCBI_GP:RUP81056.1;Name=RUP81056.1;end_range=651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_12880;partial=true;product=transposase;protein_id=RUP81056.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000237.1 1 642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000237.1 Genbank region 1 642 . + . ID=RBME01000237.1:1..642;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000237.1 Genbank gene 27 224 . + . ID=gene-D8M40_12885;Name=D8M40_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12885 RBME01000237.1 Protein Homology CDS 27 224 . + 0 ID=cds-RUP81055.1;Parent=gene-D8M40_12885;Dbxref=NCBI_GP:RUP81055.1;Name=RUP81055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014308606.1;locus_tag=D8M40_12885;product=hypothetical protein;protein_id=RUP81055.1;transl_table=11 RBME01000237.1 Genbank gene 225 572 . - . ID=gene-D8M40_12890;Name=D8M40_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12890 RBME01000237.1 Protein Homology CDS 225 572 . - 0 ID=cds-RUP81054.1;Parent=gene-D8M40_12890;Dbxref=NCBI_GP:RUP81054.1;Name=RUP81054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M40_12890;product=hypothetical protein;protein_id=RUP81054.1;transl_table=11 ##sequence-region RBME01000238.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000238.1 Genbank region 1 617 . + . ID=RBME01000238.1:1..617;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000238.1 Genbank pseudogene 1 603 . - . ID=gene-D8M40_12895;Name=D8M40_12895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12895;pseudo=true RBME01000238.1 Protein Homology CDS 1 603 . - 0 ID=cds-D8M40_12895;Parent=gene-D8M40_12895;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_12895;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region RBME01000239.1 1 577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000239.1 Genbank region 1 577 . + . ID=RBME01000239.1:1..577;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000239.1 Genbank gene 83 577 . - . ID=gene-D8M40_12900;Name=D8M40_12900;end_range=577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12900;partial=true RBME01000239.1 Protein Homology CDS 83 577 . - 0 ID=cds-RUP81035.1;Parent=gene-D8M40_12900;Dbxref=NCBI_GP:RUP81035.1;Name=RUP81035.1;end_range=577,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_12900;partial=true;product=transposase;protein_id=RUP81035.1;transl_table=11 ##sequence-region RBME01000023.1 1 10721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000023.1 Genbank region 1 10721 . + . ID=RBME01000023.1:1..10721;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000023.1 Genbank pseudogene 218 709 . - . ID=gene-D8M40_11085;Name=D8M40_11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11085;pseudo=true RBME01000023.1 Protein Homology CDS 218 709 . - 0 ID=cds-D8M40_11085;Parent=gene-D8M40_11085;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194535.1;locus_tag=D8M40_11085;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 RBME01000023.1 Genbank gene 728 907 . + . ID=gene-D8M40_11090;Name=D8M40_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11090 RBME01000023.1 Protein Homology CDS 728 907 . + 0 ID=cds-RUP86945.1;Parent=gene-D8M40_11090;Dbxref=NCBI_GP:RUP86945.1;Name=RUP86945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001993321.1;locus_tag=D8M40_11090;product=hypothetical protein;protein_id=RUP86945.1;transl_table=11 RBME01000023.1 Genbank gene 837 1688 . - . ID=gene-D8M40_11095;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=D8M40_11095 RBME01000023.1 Protein Homology CDS 837 1688 . - 0 ID=cds-RUP86946.1;Parent=gene-D8M40_11095;Dbxref=NCBI_GP:RUP86946.1;Name=RUP86946.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007929940.1;locus_tag=D8M40_11095;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=RUP86946.1;transl_table=11 RBME01000023.1 Genbank gene 1790 2581 . + . ID=gene-D8M40_11100;Name=D8M40_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11100 RBME01000023.1 Protein Homology CDS 1790 2581 . + 0 ID=cds-RUP86947.1;Parent=gene-D8M40_11100;Dbxref=NCBI_GP:RUP86947.1;Name=RUP86947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_569372.1;locus_tag=D8M40_11100;product=class 1 integron integrase IntI1;protein_id=RUP86947.1;transl_table=11 RBME01000023.1 Genbank pseudogene 2600 2776 . - . ID=gene-D8M40_11105;Name=D8M40_11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11105;pseudo=true RBME01000023.1 Protein Homology CDS 2600 2776 . - 0 ID=cds-D8M40_11105;Parent=gene-D8M40_11105;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002008502.1;locus_tag=D8M40_11105;product=IS6 family transposase;pseudo=true;transl_table=11 RBME01000023.1 Genbank gene 3326 4474 . - . ID=gene-D8M40_11110;Name=D8M40_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11110 RBME01000023.1 GeneMarkS+ CDS 3326 4474 . - 0 ID=cds-RUP86948.1;Parent=gene-D8M40_11110;Dbxref=NCBI_GP:RUP86948.1;Name=RUP86948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11110;product=hypothetical protein;protein_id=RUP86948.1;transl_table=11 RBME01000023.1 Genbank pseudogene 4556 4882 . - . ID=gene-D8M40_11115;Name=D8M40_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11115;pseudo=true RBME01000023.1 Protein Homology CDS 4556 4882 . - 0 ID=cds-D8M40_11115;Parent=gene-D8M40_11115;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010122907.1;locus_tag=D8M40_11115;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000023.1 Genbank gene 5204 5431 . + . ID=gene-D8M40_11120;Name=D8M40_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11120 RBME01000023.1 GeneMarkS+ CDS 5204 5431 . + 0 ID=cds-RUP86949.1;Parent=gene-D8M40_11120;Dbxref=NCBI_GP:RUP86949.1;Name=RUP86949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11120;product=hypothetical protein;protein_id=RUP86949.1;transl_table=11 RBME01000023.1 Genbank gene 5648 6736 . + . ID=gene-D8M40_11125;Name=D8M40_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11125 RBME01000023.1 Protein Homology CDS 5648 6736 . + 0 ID=cds-RUP86952.1;Parent=gene-D8M40_11125;Dbxref=NCBI_GP:RUP86952.1;Name=RUP86952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317386.1;locus_tag=D8M40_11125;product=hypothetical protein;protein_id=RUP86952.1;transl_table=11 RBME01000023.1 Genbank gene 6733 8499 . + . ID=gene-D8M40_11130;Name=D8M40_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11130 RBME01000023.1 Protein Homology CDS 6733 8499 . + 0 ID=cds-RUP86950.1;Parent=gene-D8M40_11130;Dbxref=NCBI_GP:RUP86950.1;Name=RUP86950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016830402.1;locus_tag=D8M40_11130;product=hypothetical protein;protein_id=RUP86950.1;transl_table=11 RBME01000023.1 Genbank gene 9570 10424 . - . ID=gene-D8M40_11135;Name=erm;gbkey=Gene;gene=erm;gene_biotype=protein_coding;locus_tag=D8M40_11135 RBME01000023.1 Protein Homology CDS 9570 10424 . - 0 ID=cds-RUP86951.1;Parent=gene-D8M40_11135;Dbxref=NCBI_GP:RUP86951.1;Name=RUP86951.1;gbkey=CDS;gene=erm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152925.1;locus_tag=D8M40_11135;product=23S ribosomal RNA methyltransferase Erm;protein_id=RUP86951.1;transl_table=11 RBME01000023.1 Genbank gene 10524 10589 . - . ID=gene-D8M40_11140;Name=D8M40_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11140 RBME01000023.1 Protein Homology CDS 10524 10589 . - 0 ID=cds-RUP86953.1;Parent=gene-D8M40_11140;Dbxref=NCBI_GP:RUP86953.1;Name=RUP86953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08051.9;locus_tag=D8M40_11140;product=erythromycin resistance leader peptide;protein_id=RUP86953.1;transl_table=11 ##sequence-region RBME01000240.1 1 522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000240.1 Genbank region 1 522 . + . ID=RBME01000240.1:1..522;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000240.1 Genbank pseudogene 1 447 . - . ID=gene-D8M40_12905;Name=D8M40_12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12905;pseudo=true RBME01000240.1 Protein Homology CDS 1 447 . - 0 ID=cds-D8M40_12905;Parent=gene-D8M40_12905;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319175.1;locus_tag=D8M40_12905;product=transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000241.1 1 475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000241.1 Genbank region 1 475 . + . ID=RBME01000241.1:1..475;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000241.1 Genbank gene 158 233 . + . ID=gene-D8M40_12910;Name=D8M40_12910;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_12910 RBME01000241.1 tRNAscan-SE tRNA 158 233 . + . ID=rna-D8M40_12910;Parent=gene-D8M40_12910;anticodon=(pos:191..193);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_12910;product=tRNA-Val RBME01000241.1 tRNAscan-SE exon 158 233 . + . ID=exon-D8M40_12910-1;Parent=rna-D8M40_12910;anticodon=(pos:191..193);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_12910;product=tRNA-Val ##sequence-region RBME01000242.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000242.1 Genbank region 1 388 . + . ID=RBME01000242.1:1..388;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000242.1 Genbank pseudogene 125 388 . - . ID=gene-D8M40_12915;Name=D8M40_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_12915;pseudo=true RBME01000242.1 Protein Homology CDS 125 388 . - 0 ID=cds-D8M40_12915;Parent=gene-D8M40_12915;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_12915;product=transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000243.1 1 364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000243.1 Genbank region 1 364 . + . ID=RBME01000243.1:1..364;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000243.1 Genbank gene 1 364 . - . ID=gene-D8M40_12920;Name=D8M40_12920;end_range=364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12920;partial=true;start_range=.,1 RBME01000243.1 GeneMarkS+ CDS 1 364 . - 0 ID=cds-RUP80924.1;Parent=gene-D8M40_12920;Dbxref=NCBI_GP:RUP80924.1;Name=RUP80924.1;end_range=364,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12920;partial=true;product=hypothetical protein;protein_id=RUP80924.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000244.1 1 332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000244.1 Genbank region 1 332 . + . ID=RBME01000244.1:1..332;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 ##sequence-region RBME01000245.1 1 294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000245.1 Genbank region 1 294 . + . ID=RBME01000245.1:1..294;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000245.1 Genbank gene 1 294 . + . ID=gene-D8M40_12925;Name=D8M40_12925;end_range=294,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_12925;partial=true;start_range=.,1 RBME01000245.1 GeneMarkS+ CDS 1 294 . + 0 ID=cds-RUP80913.1;Parent=gene-D8M40_12925;Dbxref=NCBI_GP:RUP80913.1;Name=RUP80913.1;end_range=294,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_12925;partial=true;product=hypothetical protein;protein_id=RUP80913.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000024.1 1 9341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000024.1 Genbank region 1 9341 . + . ID=RBME01000024.1:1..9341;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000024.1 Genbank gene 1 996 . - . ID=gene-D8M40_11145;Name=D8M40_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11145;partial=true;start_range=.,1 RBME01000024.1 GeneMarkS+ CDS 1 996 . - 0 ID=cds-RUP86931.1;Parent=gene-D8M40_11145;Dbxref=NCBI_GP:RUP86931.1;Name=RUP86931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11145;partial=true;product=hypothetical protein;protein_id=RUP86931.1;start_range=.,1;transl_table=11 RBME01000024.1 Genbank gene 1417 1489 . - . ID=gene-D8M40_11150;Name=D8M40_11150;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_11150 RBME01000024.1 tRNAscan-SE tRNA 1417 1489 . - . ID=rna-D8M40_11150;Parent=gene-D8M40_11150;anticodon=(pos:complement(1454..1456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_11150;product=tRNA-Thr RBME01000024.1 tRNAscan-SE exon 1417 1489 . - . ID=exon-D8M40_11150-1;Parent=rna-D8M40_11150;anticodon=(pos:complement(1454..1456));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_11150;product=tRNA-Thr RBME01000024.1 Genbank gene 1737 3317 . + . ID=gene-D8M40_11155;Name=D8M40_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11155 RBME01000024.1 Protein Homology CDS 1737 3317 . + 0 ID=cds-RUP86932.1;Parent=gene-D8M40_11155;Dbxref=NCBI_GP:RUP86932.1;Name=RUP86932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121582.1;locus_tag=D8M40_11155;product=threonine/serine exporter family protein;protein_id=RUP86932.1;transl_table=11 RBME01000024.1 Genbank gene 3396 3818 . + . ID=gene-D8M40_11160;Name=D8M40_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11160 RBME01000024.1 Protein Homology CDS 3396 3818 . + 0 ID=cds-RUP86933.1;Parent=gene-D8M40_11160;Dbxref=NCBI_GP:RUP86933.1;Name=RUP86933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011273045.1;locus_tag=D8M40_11160;product=histone;protein_id=RUP86933.1;transl_table=11 RBME01000024.1 Genbank gene 3887 5359 . + . ID=gene-D8M40_11165;Name=D8M40_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11165 RBME01000024.1 Protein Homology CDS 3887 5359 . + 0 ID=cds-RUP86934.1;Parent=gene-D8M40_11165;Dbxref=NCBI_GP:RUP86934.1;Name=RUP86934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121584.1;locus_tag=D8M40_11165;product=trehalose-6-phosphate synthase;protein_id=RUP86934.1;transl_table=11 RBME01000024.1 Genbank gene 5356 5850 . + . ID=gene-D8M40_11170;Name=D8M40_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11170 RBME01000024.1 GeneMarkS+ CDS 5356 5850 . + 0 ID=cds-RUP86935.1;Parent=gene-D8M40_11170;Dbxref=NCBI_GP:RUP86935.1;Name=RUP86935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11170;product=hypothetical protein;protein_id=RUP86935.1;transl_table=11 RBME01000024.1 Genbank gene 5976 6734 . + . ID=gene-D8M40_11175;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=D8M40_11175 RBME01000024.1 Protein Homology CDS 5976 6734 . + 0 ID=cds-RUP86939.1;Parent=gene-D8M40_11175;Dbxref=NCBI_GP:RUP86939.1;Name=RUP86939.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121586.1;locus_tag=D8M40_11175;product=trehalose-phosphatase;protein_id=RUP86939.1;transl_table=11 RBME01000024.1 Genbank gene 6770 7060 . - . ID=gene-D8M40_11180;Name=D8M40_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11180 RBME01000024.1 Protein Homology CDS 6770 7060 . - 0 ID=cds-RUP86936.1;Parent=gene-D8M40_11180;Dbxref=NCBI_GP:RUP86936.1;Name=RUP86936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301150.1;locus_tag=D8M40_11180;product=hypothetical protein;protein_id=RUP86936.1;transl_table=11 RBME01000024.1 Genbank gene 7158 8180 . - . ID=gene-D8M40_11185;Name=D8M40_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11185 RBME01000024.1 Protein Homology CDS 7158 8180 . - 0 ID=cds-RUP86937.1;Parent=gene-D8M40_11185;Dbxref=NCBI_GP:RUP86937.1;Name=RUP86937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121588.1;locus_tag=D8M40_11185;product=IMP dehydrogenase;protein_id=RUP86937.1;transl_table=11 RBME01000024.1 Genbank gene 8354 9040 . - . ID=gene-D8M40_11190;Name=D8M40_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11190 RBME01000024.1 GeneMarkS+ CDS 8354 9040 . - 0 ID=cds-RUP86938.1;Parent=gene-D8M40_11190;Dbxref=NCBI_GP:RUP86938.1;Name=RUP86938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11190;product=hypothetical protein;protein_id=RUP86938.1;transl_table=11 RBME01000024.1 Genbank gene 9033 9233 . - . ID=gene-D8M40_11195;Name=D8M40_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11195 RBME01000024.1 Protein Homology CDS 9033 9233 . - 0 ID=cds-RUP86940.1;Parent=gene-D8M40_11195;Dbxref=NCBI_GP:RUP86940.1;Name=RUP86940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529467.1;locus_tag=D8M40_11195;product=hypothetical protein;protein_id=RUP86940.1;transl_table=11 ##sequence-region RBME01000025.1 1 5699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000025.1 Genbank region 1 5699 . + . ID=RBME01000025.1:1..5699;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000025.1 Genbank gene 291 1568 . - . ID=gene-D8M40_11200;Name=D8M40_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11200 RBME01000025.1 Protein Homology CDS 291 1568 . - 0 ID=cds-RUP86927.1;Parent=gene-D8M40_11200;Dbxref=NCBI_GP:RUP86927.1;Name=RUP86927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121385.1;locus_tag=D8M40_11200;product=MFS transporter;protein_id=RUP86927.1;transl_table=11 RBME01000025.1 Genbank gene 2508 2708 . + . ID=gene-D8M40_11205;Name=D8M40_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11205 RBME01000025.1 Protein Homology CDS 2508 2708 . + 0 ID=cds-RUP86928.1;Parent=gene-D8M40_11205;Dbxref=NCBI_GP:RUP86928.1;Name=RUP86928.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M40_11205;product=transposase;protein_id=RUP86928.1;transl_table=11 RBME01000025.1 Genbank gene 3227 4108 . - . ID=gene-D8M40_11210;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=D8M40_11210 RBME01000025.1 Protein Homology CDS 3227 4108 . - 0 ID=cds-RUP86929.1;Parent=gene-D8M40_11210;Dbxref=NCBI_GP:RUP86929.1;Name=RUP86929.1;gbkey=CDS;gene=ccsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934284.1;locus_tag=D8M40_11210;product=c-type cytochrome biogenesis protein CcsB;protein_id=RUP86929.1;transl_table=11 RBME01000025.1 Genbank pseudogene 4258 5457 . - . ID=gene-D8M40_11215;Name=D8M40_11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11215;pseudo=true RBME01000025.1 Protein Homology CDS 4258 5457 . - 0 ID=cds-D8M40_11215;Parent=gene-D8M40_11215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558200.1;locus_tag=D8M40_11215;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000026.1 1 5498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000026.1 Genbank region 1 5498 . + . ID=RBME01000026.1:1..5498;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000026.1 Genbank gene 254 1778 . + . ID=gene-D8M40_11220;Name=D8M40_11220;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M40_11220 RBME01000026.1 Genbank rRNA 254 1778 . + . ID=rna-D8M40_11220;Parent=gene-D8M40_11220;gbkey=rRNA;locus_tag=D8M40_11220;product=16S ribosomal RNA RBME01000026.1 Genbank exon 254 1778 . + . ID=exon-D8M40_11220-1;Parent=rna-D8M40_11220;gbkey=rRNA;locus_tag=D8M40_11220;product=16S ribosomal RNA RBME01000026.1 Genbank gene 2153 5228 . + . ID=gene-D8M40_11225;Name=D8M40_11225;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M40_11225 RBME01000026.1 Genbank rRNA 2153 5228 . + . ID=rna-D8M40_11225;Parent=gene-D8M40_11225;gbkey=rRNA;locus_tag=D8M40_11225;product=23S ribosomal RNA RBME01000026.1 Genbank exon 2153 5228 . + . ID=exon-D8M40_11225-1;Parent=rna-D8M40_11225;gbkey=rRNA;locus_tag=D8M40_11225;product=23S ribosomal RNA RBME01000026.1 Genbank gene 5350 5468 . + . ID=gene-D8M40_11230;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M40_11230 RBME01000026.1 cmsearch rRNA 5350 5468 . + . ID=rna-D8M40_11230;Parent=gene-D8M40_11230;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_11230;product=5S ribosomal RNA RBME01000026.1 cmsearch exon 5350 5468 . + . ID=exon-D8M40_11230-1;Parent=rna-D8M40_11230;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_11230;product=5S ribosomal RNA ##sequence-region RBME01000027.1 1 4324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000027.1 Genbank region 1 4324 . + . ID=RBME01000027.1:1..4324;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000027.1 Genbank gene 1 73 . - . ID=gene-D8M40_11235;Name=D8M40_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11235;partial=true;start_range=.,1 RBME01000027.1 Protein Homology CDS 1 73 . - 0 ID=cds-RUP86923.1;Parent=gene-D8M40_11235;Dbxref=NCBI_GP:RUP86923.1;Name=RUP86923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1;locus_tag=D8M40_11235;partial=true;product=IS6 family transposase;protein_id=RUP86923.1;start_range=.,1;transl_table=11 RBME01000027.1 Genbank pseudogene 50 127 . + . ID=gene-D8M40_11240;Name=D8M40_11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11240;pseudo=true RBME01000027.1 Protein Homology CDS 50 127 . + 0 ID=cds-D8M40_11240;Parent=gene-D8M40_11240;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291578.1;locus_tag=D8M40_11240;product=Resuscitation-promoting factor Rpf1;pseudo=true;transl_table=11 RBME01000027.1 Genbank gene 212 703 . - . ID=gene-D8M40_11245;Name=D8M40_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11245 RBME01000027.1 GeneMarkS+ CDS 212 703 . - 0 ID=cds-RUP86919.1;Parent=gene-D8M40_11245;Dbxref=NCBI_GP:RUP86919.1;Name=RUP86919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11245;product=hypothetical protein;protein_id=RUP86919.1;transl_table=11 RBME01000027.1 Genbank gene 895 1659 . - . ID=gene-D8M40_11250;Name=D8M40_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11250 RBME01000027.1 Protein Homology CDS 895 1659 . - 0 ID=cds-RUP86920.1;Parent=gene-D8M40_11250;Dbxref=NCBI_GP:RUP86920.1;Name=RUP86920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002008502.1;locus_tag=D8M40_11250;product=IS6-like element IS6100 family transposase;protein_id=RUP86920.1;transl_table=11 RBME01000027.1 Genbank gene 1636 1845 . + . ID=gene-D8M40_11255;Name=D8M40_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11255 RBME01000027.1 Protein Homology CDS 1636 1845 . + 0 ID=cds-RUP86921.1;Parent=gene-D8M40_11255;Dbxref=NCBI_GP:RUP86921.1;Name=RUP86921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000451483.1;locus_tag=D8M40_11255;product=hypothetical protein;protein_id=RUP86921.1;transl_table=11 RBME01000027.1 Genbank pseudogene 1842 2831 . - . ID=gene-D8M40_11260;Name=D8M40_11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11260;pseudo=true RBME01000027.1 Protein Homology CDS 1842 2831 . - 0 ID=cds-D8M40_11260;Parent=gene-D8M40_11260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890217.1;locus_tag=D8M40_11260;product=IS481-like element ISCgl1 family transposase;pseudo=true;transl_table=11 RBME01000027.1 Genbank gene 2831 4006 . - . ID=gene-D8M40_11265;Name=cmx;gbkey=Gene;gene=cmx;gene_biotype=protein_coding;locus_tag=D8M40_11265 RBME01000027.1 Protein Homology CDS 2831 4006 . - 0 ID=cds-RUP86922.1;Parent=gene-D8M40_11265;Dbxref=NCBI_GP:RUP86922.1;Name=RUP86922.1;gbkey=CDS;gene=cmx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010890215.1;locus_tag=D8M40_11265;product=chloramphenicol efflux MFS transporter Cmx;protein_id=RUP86922.1;transl_table=11 RBME01000027.1 Genbank gene 4028 4081 . - . ID=gene-D8M40_11270;Name=D8M40_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11270 RBME01000027.1 Protein Homology CDS 4028 4081 . - 0 ID=cds-RUP86924.1;Parent=gene-D8M40_11270;Dbxref=NCBI_GP:RUP86924.1;Name=RUP86924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08077.9;locus_tag=D8M40_11270;product=hypothetical protein;protein_id=RUP86924.1;transl_table=11 RBME01000027.1 Genbank pseudogene 4198 4275 . - . ID=gene-D8M40_11275;Name=D8M40_11275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11275;pseudo=true RBME01000027.1 Protein Homology CDS 4198 4275 . - 0 ID=cds-D8M40_11275;Parent=gene-D8M40_11275;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859503.1;locus_tag=D8M40_11275;product=Resuscitation-promoting factor Rpf1;pseudo=true;transl_table=11 RBME01000027.1 Genbank gene 4252 4324 . + . ID=gene-D8M40_11280;Name=D8M40_11280;end_range=4324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11280;partial=true RBME01000027.1 Protein Homology CDS 4252 4324 . + 0 ID=cds-RUP86925.1;Parent=gene-D8M40_11280;Dbxref=NCBI_GP:RUP86925.1;Name=RUP86925.1;end_range=4324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1;locus_tag=D8M40_11280;partial=true;product=IS6 family transposase;protein_id=RUP86925.1;transl_table=11 ##sequence-region RBME01000028.1 1 1802 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000028.1 Genbank region 1 1802 . + . ID=RBME01000028.1:1..1802;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000028.1 Genbank gene 80 724 . + . ID=gene-D8M40_11285;Name=D8M40_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11285 RBME01000028.1 Protein Homology CDS 80 724 . + 0 ID=cds-RUP86916.1;Parent=gene-D8M40_11285;Dbxref=NCBI_GP:RUP86916.1;Name=RUP86916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003184725.1;locus_tag=D8M40_11285;product=thiol:disulfide oxidoreductase;protein_id=RUP86916.1;transl_table=11 RBME01000028.1 Genbank gene 865 1644 . - . ID=gene-D8M40_11290;Name=D8M40_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11290 RBME01000028.1 Protein Homology CDS 865 1644 . - 0 ID=cds-RUP86915.1;Parent=gene-D8M40_11290;Dbxref=NCBI_GP:RUP86915.1;Name=RUP86915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009403814.1;locus_tag=D8M40_11290;product=ABC transporter substrate-binding protein;protein_id=RUP86915.1;transl_table=11 ##sequence-region RBME01000029.1 1 1608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000029.1 Genbank region 1 1608 . + . ID=RBME01000029.1:1..1608;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000029.1 Genbank gene 43 1608 . - . ID=gene-D8M40_11295;Name=D8M40_11295;end_range=1608,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11295;partial=true RBME01000029.1 Protein Homology CDS 43 1608 . - 0 ID=cds-RUP86912.1;Parent=gene-D8M40_11295;Dbxref=NCBI_GP:RUP86912.1;Name=RUP86912.1;end_range=1608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008055384.1;locus_tag=D8M40_11295;partial=true;product=TonB-dependent receptor;protein_id=RUP86912.1;transl_table=11 ##sequence-region RBME01000002.1 1 233747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000002.1 Genbank region 1 233747 . + . ID=RBME01000002.1:1..233747;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000002.1 Genbank gene 1 691 . - . ID=gene-D8M40_02660;Name=D8M40_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02660;partial=true;start_range=.,1 RBME01000002.1 Protein Homology CDS 1 691 . - 0 ID=cds-RUP89835.1;Parent=gene-D8M40_02660;Dbxref=NCBI_GP:RUP89835.1;Name=RUP89835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=D8M40_02660;partial=true;product=IS3 family transposase;protein_id=RUP89835.1;start_range=.,1;transl_table=11 RBME01000002.1 Genbank gene 728 916 . - . ID=gene-D8M40_02665;Name=D8M40_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02665 RBME01000002.1 Protein Homology CDS 728 916 . - 0 ID=cds-RUP89836.1;Parent=gene-D8M40_02665;Dbxref=NCBI_GP:RUP89836.1;Name=RUP89836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120348.1;locus_tag=D8M40_02665;product=hypothetical protein;protein_id=RUP89836.1;transl_table=11 RBME01000002.1 Genbank gene 1337 1558 . + . ID=gene-D8M40_02670;Name=D8M40_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02670 RBME01000002.1 GeneMarkS+ CDS 1337 1558 . + 0 ID=cds-RUP89837.1;Parent=gene-D8M40_02670;Dbxref=NCBI_GP:RUP89837.1;Name=RUP89837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02670;product=hypothetical protein;protein_id=RUP89837.1;transl_table=11 RBME01000002.1 Genbank gene 1621 2034 . + . ID=gene-D8M40_02675;Name=D8M40_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02675 RBME01000002.1 GeneMarkS+ CDS 1621 2034 . + 0 ID=cds-RUP89838.1;Parent=gene-D8M40_02675;Dbxref=NCBI_GP:RUP89838.1;Name=RUP89838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02675;product=hypothetical protein;protein_id=RUP89838.1;transl_table=11 RBME01000002.1 Genbank gene 2241 2534 . - . ID=gene-D8M40_02680;Name=D8M40_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02680 RBME01000002.1 Protein Homology CDS 2241 2534 . - 0 ID=cds-RUP89839.1;Parent=gene-D8M40_02680;Dbxref=NCBI_GP:RUP89839.1;Name=RUP89839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276388.1;locus_tag=D8M40_02680;product=antibiotic biosynthesis monooxygenase;protein_id=RUP89839.1;transl_table=11 RBME01000002.1 Genbank gene 2637 3458 . - . ID=gene-D8M40_02685;Name=D8M40_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02685 RBME01000002.1 Protein Homology CDS 2637 3458 . - 0 ID=cds-RUP89840.1;Parent=gene-D8M40_02685;Dbxref=NCBI_GP:RUP89840.1;Name=RUP89840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003779523.1;locus_tag=D8M40_02685;product=class I SAM-dependent methyltransferase;protein_id=RUP89840.1;transl_table=11 RBME01000002.1 Genbank gene 3783 5219 . - . ID=gene-D8M40_02690;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D8M40_02690 RBME01000002.1 Protein Homology CDS 3783 5219 . - 0 ID=cds-RUP89841.1;Parent=gene-D8M40_02690;Dbxref=NCBI_GP:RUP89841.1;Name=RUP89841.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601417.1;locus_tag=D8M40_02690;product=type I glutamate--ammonia ligase;protein_id=RUP89841.1;transl_table=11 RBME01000002.1 Genbank gene 5345 5929 . - . ID=gene-D8M40_02695;Name=D8M40_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02695 RBME01000002.1 Protein Homology CDS 5345 5929 . - 0 ID=cds-RUP89842.1;Parent=gene-D8M40_02695;Dbxref=NCBI_GP:RUP89842.1;Name=RUP89842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400375.1;locus_tag=D8M40_02695;product=aminoacyl-tRNA hydrolase;protein_id=RUP89842.1;transl_table=11 RBME01000002.1 Genbank gene 5997 6683 . - . ID=gene-D8M40_02700;Name=D8M40_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02700 RBME01000002.1 Protein Homology CDS 5997 6683 . - 0 ID=cds-RUP89843.1;Parent=gene-D8M40_02700;Dbxref=NCBI_GP:RUP89843.1;Name=RUP89843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323656.1;locus_tag=D8M40_02700;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=RUP89843.1;transl_table=11 RBME01000002.1 Genbank gene 6928 7698 . - . ID=gene-D8M40_02705;Name=D8M40_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02705 RBME01000002.1 Protein Homology CDS 6928 7698 . - 0 ID=cds-RUP89844.1;Parent=gene-D8M40_02705;Dbxref=NCBI_GP:RUP89844.1;Name=RUP89844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119888.1;locus_tag=D8M40_02705;product=SDR family oxidoreductase;protein_id=RUP89844.1;transl_table=11 RBME01000002.1 Genbank gene 7698 8687 . - . ID=gene-D8M40_02710;Name=D8M40_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02710 RBME01000002.1 Protein Homology CDS 7698 8687 . - 0 ID=cds-RUP89845.1;Parent=gene-D8M40_02710;Dbxref=NCBI_GP:RUP89845.1;Name=RUP89845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530021.1;locus_tag=D8M40_02710;product=ribose-phosphate diphosphokinase;protein_id=RUP89845.1;transl_table=11 RBME01000002.1 Genbank gene 8713 10221 . - . ID=gene-D8M40_02715;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=D8M40_02715 RBME01000002.1 Protein Homology CDS 8713 10221 . - 0 ID=cds-RUP89846.1;Parent=gene-D8M40_02715;Dbxref=NCBI_GP:RUP89846.1;Name=RUP89846.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119890.1;locus_tag=D8M40_02715;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=RUP89846.1;transl_table=11 RBME01000002.1 Genbank pseudogene 10312 11596 . - . ID=gene-D8M40_02720;Name=D8M40_02720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_02720;pseudo=true RBME01000002.1 Protein Homology CDS 10312 11596 . - 0 ID=cds-D8M40_02720;Parent=gene-D8M40_02720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119891.1;locus_tag=D8M40_02720;product=MFS transporter;pseudo=true;transl_table=11 RBME01000002.1 Genbank gene 11961 15698 . + . ID=gene-D8M40_02725;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=D8M40_02725 RBME01000002.1 Protein Homology CDS 11961 15698 . + 0 ID=cds-RUP90024.1;Parent=gene-D8M40_02725;Dbxref=NCBI_GP:RUP90024.1;Name=RUP90024.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119892.1;locus_tag=D8M40_02725;product=transcription-repair coupling factor;protein_id=RUP90024.1;transl_table=11 RBME01000002.1 Genbank gene 15713 16321 . + . ID=gene-D8M40_02730;Name=D8M40_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02730 RBME01000002.1 Protein Homology CDS 15713 16321 . + 0 ID=cds-RUP89847.1;Parent=gene-D8M40_02730;Dbxref=NCBI_GP:RUP89847.1;Name=RUP89847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119893.1;locus_tag=D8M40_02730;product=DNA-3-methyladenine glycosylase;protein_id=RUP89847.1;transl_table=11 RBME01000002.1 Genbank gene 16386 17027 . + . ID=gene-D8M40_02735;Name=D8M40_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02735 RBME01000002.1 Protein Homology CDS 16386 17027 . + 0 ID=cds-RUP89848.1;Parent=gene-D8M40_02735;Dbxref=NCBI_GP:RUP89848.1;Name=RUP89848.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M40_02735;product=TetR/AcrR family transcriptional regulator;protein_id=RUP89848.1;transl_table=11 RBME01000002.1 Genbank gene 16990 19068 . - . ID=gene-D8M40_02740;Name=D8M40_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02740 RBME01000002.1 Protein Homology CDS 16990 19068 . - 0 ID=cds-RUP89849.1;Parent=gene-D8M40_02740;Dbxref=NCBI_GP:RUP89849.1;Name=RUP89849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119895.1;locus_tag=D8M40_02740;product=exopolyphosphatase;protein_id=RUP89849.1;transl_table=11 RBME01000002.1 Genbank gene 19065 20027 . - . ID=gene-D8M40_02745;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=D8M40_02745 RBME01000002.1 Protein Homology CDS 19065 20027 . - 0 ID=cds-RUP89850.1;Parent=gene-D8M40_02745;Dbxref=NCBI_GP:RUP89850.1;Name=RUP89850.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119896.1;locus_tag=D8M40_02745;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=RUP89850.1;transl_table=11 RBME01000002.1 Genbank gene 20028 21185 . - . ID=gene-D8M40_02750;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=D8M40_02750 RBME01000002.1 Protein Homology CDS 20028 21185 . - 0 ID=cds-RUP89851.1;Parent=gene-D8M40_02750;Dbxref=NCBI_GP:RUP89851.1;Name=RUP89851.1;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119897.1;locus_tag=D8M40_02750;product=quinolinate synthase NadA;protein_id=RUP89851.1;transl_table=11 RBME01000002.1 Genbank gene 21283 22725 . - . ID=gene-D8M40_02755;Name=D8M40_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02755 RBME01000002.1 Protein Homology CDS 21283 22725 . - 0 ID=cds-RUP89852.1;Parent=gene-D8M40_02755;Dbxref=NCBI_GP:RUP89852.1;Name=RUP89852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119898.1;locus_tag=D8M40_02755;product=amino acid permease;protein_id=RUP89852.1;transl_table=11 RBME01000002.1 Genbank gene 22931 23566 . + . ID=gene-D8M40_02760;Name=D8M40_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02760 RBME01000002.1 Protein Homology CDS 22931 23566 . + 0 ID=cds-RUP90025.1;Parent=gene-D8M40_02760;Dbxref=NCBI_GP:RUP90025.1;Name=RUP90025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714962.1;locus_tag=D8M40_02760;product=nucleoside triphosphate hydrolase;protein_id=RUP90025.1;transl_table=11 RBME01000002.1 Genbank gene 23579 24382 . + . ID=gene-D8M40_02765;Name=D8M40_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02765 RBME01000002.1 Protein Homology CDS 23579 24382 . + 0 ID=cds-RUP89853.1;Parent=gene-D8M40_02765;Dbxref=NCBI_GP:RUP89853.1;Name=RUP89853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119033.1;locus_tag=D8M40_02765;product=hypothetical protein;protein_id=RUP89853.1;transl_table=11 RBME01000002.1 Genbank gene 24491 25768 . + . ID=gene-D8M40_02770;Name=D8M40_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02770 RBME01000002.1 Protein Homology CDS 24491 25768 . + 0 ID=cds-RUP89854.1;Parent=gene-D8M40_02770;Dbxref=NCBI_GP:RUP89854.1;Name=RUP89854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600201.1;locus_tag=D8M40_02770;product=phosphopyruvate hydratase;protein_id=RUP89854.1;transl_table=11 RBME01000002.1 Genbank gene 25800 26405 . + . ID=gene-D8M40_02775;Name=D8M40_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02775 RBME01000002.1 Protein Homology CDS 25800 26405 . + 0 ID=cds-RUP89855.1;Parent=gene-D8M40_02775;Dbxref=NCBI_GP:RUP89855.1;Name=RUP89855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119902.1;locus_tag=D8M40_02775;product=septum formation initiator family protein;protein_id=RUP89855.1;transl_table=11 RBME01000002.1 Genbank gene 26459 27004 . + . ID=gene-D8M40_02780;Name=D8M40_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02780 RBME01000002.1 Protein Homology CDS 26459 27004 . + 0 ID=cds-RUP89856.1;Parent=gene-D8M40_02780;Dbxref=NCBI_GP:RUP89856.1;Name=RUP89856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822769.1;locus_tag=D8M40_02780;product=DUF501 domain-containing protein;protein_id=RUP89856.1;transl_table=11 RBME01000002.1 Genbank gene 27040 28026 . + . ID=gene-D8M40_02785;Name=D8M40_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02785 RBME01000002.1 Protein Homology CDS 27040 28026 . + 0 ID=cds-RUP89857.1;Parent=gene-D8M40_02785;Dbxref=NCBI_GP:RUP89857.1;Name=RUP89857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119904.1;locus_tag=D8M40_02785;product=Ppx/GppA family phosphatase;protein_id=RUP89857.1;transl_table=11 RBME01000002.1 Genbank gene 28073 28149 . + . ID=gene-D8M40_02790;Name=D8M40_02790;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_02790 RBME01000002.1 tRNAscan-SE tRNA 28073 28149 . + . ID=rna-D8M40_02790;Parent=gene-D8M40_02790;anticodon=(pos:28107..28109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02790;product=tRNA-Leu RBME01000002.1 tRNAscan-SE exon 28073 28149 . + . ID=exon-D8M40_02790-1;Parent=rna-D8M40_02790;anticodon=(pos:28107..28109);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_02790;product=tRNA-Leu RBME01000002.1 Genbank gene 28392 29213 . + . ID=gene-D8M40_02795;Name=D8M40_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02795 RBME01000002.1 Protein Homology CDS 28392 29213 . + 0 ID=cds-RUP89858.1;Parent=gene-D8M40_02795;Dbxref=NCBI_GP:RUP89858.1;Name=RUP89858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119905.1;locus_tag=D8M40_02795;product=hypothetical protein;protein_id=RUP89858.1;transl_table=11 RBME01000002.1 Genbank gene 29355 29975 . - . ID=gene-D8M40_02800;Name=D8M40_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02800 RBME01000002.1 GeneMarkS+ CDS 29355 29975 . - 0 ID=cds-RUP89859.1;Parent=gene-D8M40_02800;Dbxref=NCBI_GP:RUP89859.1;Name=RUP89859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02800;product=hypothetical protein;protein_id=RUP89859.1;transl_table=11 RBME01000002.1 Genbank gene 29990 30514 . - . ID=gene-D8M40_02805;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=D8M40_02805 RBME01000002.1 Protein Homology CDS 29990 30514 . - 0 ID=cds-RUP89860.1;Parent=gene-D8M40_02805;Dbxref=NCBI_GP:RUP89860.1;Name=RUP89860.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005523566.1;locus_tag=D8M40_02805;product=transcription elongation factor GreA;protein_id=RUP89860.1;transl_table=11 RBME01000002.1 Genbank gene 30774 31256 . - . ID=gene-D8M40_02810;Name=D8M40_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02810 RBME01000002.1 Protein Homology CDS 30774 31256 . - 0 ID=cds-RUP89861.1;Parent=gene-D8M40_02810;Dbxref=NCBI_GP:RUP89861.1;Name=RUP89861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14155.4;locus_tag=D8M40_02810;product=DUF4307 domain-containing protein;protein_id=RUP89861.1;transl_table=11 RBME01000002.1 Genbank gene 31355 32206 . + . ID=gene-D8M40_02815;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=D8M40_02815 RBME01000002.1 Protein Homology CDS 31355 32206 . + 0 ID=cds-RUP90026.1;Parent=gene-D8M40_02815;Dbxref=NCBI_GP:RUP90026.1;Name=RUP90026.1;gbkey=CDS;gene=mca;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297486.1;locus_tag=D8M40_02815;product=mycothiol conjugate amidase Mca;protein_id=RUP90026.1;transl_table=11 RBME01000002.1 Genbank gene 32305 32532 . + . ID=gene-D8M40_02820;Name=D8M40_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02820 RBME01000002.1 Protein Homology CDS 32305 32532 . + 0 ID=cds-RUP90027.1;Parent=gene-D8M40_02820;Dbxref=NCBI_GP:RUP90027.1;Name=RUP90027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840983.1;locus_tag=D8M40_02820;product=hypothetical protein;protein_id=RUP90027.1;transl_table=11 RBME01000002.1 Genbank gene 32535 33302 . + . ID=gene-D8M40_02825;Name=D8M40_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02825 RBME01000002.1 Protein Homology CDS 32535 33302 . + 0 ID=cds-RUP89862.1;Parent=gene-D8M40_02825;Dbxref=NCBI_GP:RUP89862.1;Name=RUP89862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187364.1;locus_tag=D8M40_02825;product=isoprenyl transferase;protein_id=RUP89862.1;transl_table=11 RBME01000002.1 Genbank gene 33342 34256 . - . ID=gene-D8M40_02830;Name=D8M40_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02830 RBME01000002.1 Protein Homology CDS 33342 34256 . - 0 ID=cds-RUP89863.1;Parent=gene-D8M40_02830;Dbxref=NCBI_GP:RUP89863.1;Name=RUP89863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119912.1;locus_tag=D8M40_02830;product=type I pantothenate kinase;protein_id=RUP89863.1;transl_table=11 RBME01000002.1 Genbank gene 34338 35606 . + . ID=gene-D8M40_02835;Name=D8M40_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02835 RBME01000002.1 Protein Homology CDS 34338 35606 . + 0 ID=cds-RUP89864.1;Parent=gene-D8M40_02835;Dbxref=NCBI_GP:RUP89864.1;Name=RUP89864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005293313.1;locus_tag=D8M40_02835;product=serine hydroxymethyltransferase;protein_id=RUP89864.1;transl_table=11 RBME01000002.1 Genbank gene 35610 37799 . + . ID=gene-D8M40_02840;Name=D8M40_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02840 RBME01000002.1 Protein Homology CDS 35610 37799 . + 0 ID=cds-RUP89865.1;Parent=gene-D8M40_02840;Dbxref=NCBI_GP:RUP89865.1;Name=RUP89865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00425.16%2CHMM:TIGR00566;locus_tag=D8M40_02840;product=aminodeoxychorismate synthase component I;protein_id=RUP89865.1;transl_table=11 RBME01000002.1 Genbank gene 37901 38833 . + . ID=gene-D8M40_02845;Name=D8M40_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02845 RBME01000002.1 Protein Homology CDS 37901 38833 . + 0 ID=cds-RUP89866.1;Parent=gene-D8M40_02845;Dbxref=NCBI_GP:RUP89866.1;Name=RUP89866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119915.1;locus_tag=D8M40_02845;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP89866.1;transl_table=11 RBME01000002.1 Genbank gene 38920 39669 . + . ID=gene-D8M40_02850;Name=D8M40_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02850 RBME01000002.1 Protein Homology CDS 38920 39669 . + 0 ID=cds-RUP89867.1;Parent=gene-D8M40_02850;Dbxref=NCBI_GP:RUP89867.1;Name=RUP89867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01063.17;locus_tag=D8M40_02850;product=hypothetical protein;protein_id=RUP89867.1;transl_table=11 RBME01000002.1 Genbank gene 39732 40079 . - . ID=gene-D8M40_02855;Name=D8M40_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02855 RBME01000002.1 Protein Homology CDS 39732 40079 . - 0 ID=cds-RUP90028.1;Parent=gene-D8M40_02855;Dbxref=NCBI_GP:RUP90028.1;Name=RUP90028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015381415.1;locus_tag=D8M40_02855;product=transcriptional regulator;protein_id=RUP90028.1;transl_table=11 RBME01000002.1 Genbank gene 40419 41213 . + . ID=gene-D8M40_02860;Name=D8M40_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02860 RBME01000002.1 Protein Homology CDS 40419 41213 . + 0 ID=cds-RUP89868.1;Parent=gene-D8M40_02860;Dbxref=NCBI_GP:RUP89868.1;Name=RUP89868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119919.1;locus_tag=D8M40_02860;product=LysR family transcriptional regulator;protein_id=RUP89868.1;transl_table=11 RBME01000002.1 Genbank gene 41359 41886 . + . ID=gene-D8M40_02865;Name=D8M40_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02865 RBME01000002.1 Protein Homology CDS 41359 41886 . + 0 ID=cds-RUP89869.1;Parent=gene-D8M40_02865;Dbxref=NCBI_GP:RUP89869.1;Name=RUP89869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119920.1;locus_tag=D8M40_02865;product=N-acetyltransferase family protein;protein_id=RUP89869.1;transl_table=11 RBME01000002.1 Genbank gene 41927 42781 . - . ID=gene-D8M40_02870;Name=D8M40_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02870 RBME01000002.1 Protein Homology CDS 41927 42781 . - 0 ID=cds-RUP89870.1;Parent=gene-D8M40_02870;Dbxref=NCBI_GP:RUP89870.1;Name=RUP89870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061778.1;locus_tag=D8M40_02870;product=biotin-dependent carboxyltransferase family protein;protein_id=RUP89870.1;transl_table=11 RBME01000002.1 Genbank gene 42775 43401 . - . ID=gene-D8M40_02875;Name=D8M40_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02875 RBME01000002.1 Protein Homology CDS 42775 43401 . - 0 ID=cds-RUP89871.1;Parent=gene-D8M40_02875;Dbxref=NCBI_GP:RUP89871.1;Name=RUP89871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006237760.1;locus_tag=D8M40_02875;product=allophanate hydrolase subunit 1;protein_id=RUP89871.1;transl_table=11 RBME01000002.1 Genbank gene 43395 44168 . - . ID=gene-D8M40_02880;Name=D8M40_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02880 RBME01000002.1 Protein Homology CDS 43395 44168 . - 0 ID=cds-RUP89872.1;Parent=gene-D8M40_02880;Dbxref=NCBI_GP:RUP89872.1;Name=RUP89872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006578162.1;locus_tag=D8M40_02880;product=LamB/YcsF family protein;protein_id=RUP89872.1;transl_table=11 RBME01000002.1 Genbank gene 44262 45551 . - . ID=gene-D8M40_02885;Name=D8M40_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02885 RBME01000002.1 Protein Homology CDS 44262 45551 . - 0 ID=cds-RUP89873.1;Parent=gene-D8M40_02885;Dbxref=NCBI_GP:RUP89873.1;Name=RUP89873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119924.1;locus_tag=D8M40_02885;product=divalent metal cation transporter;protein_id=RUP89873.1;transl_table=11 RBME01000002.1 Genbank gene 45782 46402 . + . ID=gene-D8M40_02890;Name=D8M40_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02890 RBME01000002.1 Protein Homology CDS 45782 46402 . + 0 ID=cds-RUP89874.1;Parent=gene-D8M40_02890;Dbxref=NCBI_GP:RUP89874.1;Name=RUP89874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00392.19;locus_tag=D8M40_02890;product=GntR family transcriptional regulator;protein_id=RUP89874.1;transl_table=11 RBME01000002.1 Genbank gene 46422 47576 . + . ID=gene-D8M40_02895;Name=D8M40_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02895 RBME01000002.1 Protein Homology CDS 46422 47576 . + 0 ID=cds-RUP89875.1;Parent=gene-D8M40_02895;Dbxref=NCBI_GP:RUP89875.1;Name=RUP89875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119926.1;locus_tag=D8M40_02895;product=hypothetical protein;protein_id=RUP89875.1;transl_table=11 RBME01000002.1 Genbank gene 47681 48538 . + . ID=gene-D8M40_02900;Name=D8M40_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02900 RBME01000002.1 GeneMarkS+ CDS 47681 48538 . + 0 ID=cds-RUP89876.1;Parent=gene-D8M40_02900;Dbxref=NCBI_GP:RUP89876.1;Name=RUP89876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02900;product=hypothetical protein;protein_id=RUP89876.1;transl_table=11 RBME01000002.1 Genbank gene 48573 50579 . - . ID=gene-D8M40_02905;Name=D8M40_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02905 RBME01000002.1 GeneMarkS+ CDS 48573 50579 . - 0 ID=cds-RUP89877.1;Parent=gene-D8M40_02905;Dbxref=NCBI_GP:RUP89877.1;Name=RUP89877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02905;product=hypothetical protein;protein_id=RUP89877.1;transl_table=11 RBME01000002.1 Genbank gene 50598 51254 . - . ID=gene-D8M40_02910;Name=D8M40_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02910 RBME01000002.1 Protein Homology CDS 50598 51254 . - 0 ID=cds-RUP89878.1;Parent=gene-D8M40_02910;Dbxref=NCBI_GP:RUP89878.1;Name=RUP89878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12079.6;locus_tag=D8M40_02910;product=DUF3558 domain-containing protein;protein_id=RUP89878.1;transl_table=11 RBME01000002.1 Genbank gene 51883 52110 . - . ID=gene-D8M40_02915;Name=D8M40_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02915 RBME01000002.1 GeneMarkS+ CDS 51883 52110 . - 0 ID=cds-RUP89879.1;Parent=gene-D8M40_02915;Dbxref=NCBI_GP:RUP89879.1;Name=RUP89879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02915;product=hypothetical protein;protein_id=RUP89879.1;transl_table=11 RBME01000002.1 Genbank gene 52406 52771 . - . ID=gene-D8M40_02920;Name=D8M40_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02920 RBME01000002.1 Protein Homology CDS 52406 52771 . - 0 ID=cds-RUP89880.1;Parent=gene-D8M40_02920;Dbxref=NCBI_GP:RUP89880.1;Name=RUP89880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012998999.1;locus_tag=D8M40_02920;product=alkylphosphonate utilization protein;protein_id=RUP89880.1;transl_table=11 RBME01000002.1 Genbank gene 53025 54428 . - . ID=gene-D8M40_02925;Name=D8M40_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02925 RBME01000002.1 Protein Homology CDS 53025 54428 . - 0 ID=cds-RUP89881.1;Parent=gene-D8M40_02925;Dbxref=NCBI_GP:RUP89881.1;Name=RUP89881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359865.1;locus_tag=D8M40_02925;product=class II fumarate hydratase;protein_id=RUP89881.1;transl_table=11 RBME01000002.1 Genbank gene 54603 55613 . - . ID=gene-D8M40_02930;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=D8M40_02930 RBME01000002.1 Protein Homology CDS 54603 55613 . - 0 ID=cds-RUP89882.1;Parent=gene-D8M40_02930;Dbxref=NCBI_GP:RUP89882.1;Name=RUP89882.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119932.1;locus_tag=D8M40_02930;product=class II fructose-bisphosphatase;protein_id=RUP89882.1;transl_table=11 RBME01000002.1 Genbank gene 55854 56381 . + . ID=gene-D8M40_02935;Name=D8M40_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02935 RBME01000002.1 Protein Homology CDS 55854 56381 . + 0 ID=cds-RUP89883.1;Parent=gene-D8M40_02935;Dbxref=NCBI_GP:RUP89883.1;Name=RUP89883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14030.4;locus_tag=D8M40_02935;product=DUF4245 domain-containing protein;protein_id=RUP89883.1;transl_table=11 RBME01000002.1 Genbank gene 56422 57858 . - . ID=gene-D8M40_02940;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D8M40_02940 RBME01000002.1 Protein Homology CDS 56422 57858 . - 0 ID=cds-RUP89884.1;Parent=gene-D8M40_02940;Dbxref=NCBI_GP:RUP89884.1;Name=RUP89884.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119934.1;locus_tag=D8M40_02940;product=type I glutamate--ammonia ligase;protein_id=RUP89884.1;transl_table=11 RBME01000002.1 Genbank gene 57967 59112 . - . ID=gene-D8M40_02945;Name=D8M40_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02945 RBME01000002.1 Protein Homology CDS 57967 59112 . - 0 ID=cds-RUP89885.1;Parent=gene-D8M40_02945;Dbxref=NCBI_GP:RUP89885.1;Name=RUP89885.1;Note=catalyzes the formation of L-proline from L-ornithine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119935.1;locus_tag=D8M40_02945;product=ornithine cyclodeaminase;protein_id=RUP89885.1;transl_table=11 RBME01000002.1 Genbank gene 59230 59517 . - . ID=gene-D8M40_02950;Name=D8M40_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02950 RBME01000002.1 Protein Homology CDS 59230 59517 . - 0 ID=cds-RUP89886.1;Parent=gene-D8M40_02950;Dbxref=NCBI_GP:RUP89886.1;Name=RUP89886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119936.1;locus_tag=D8M40_02950;product=exodeoxyribonuclease VII small subunit;protein_id=RUP89886.1;transl_table=11 RBME01000002.1 Genbank gene 59596 60834 . - . ID=gene-D8M40_02955;Name=D8M40_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02955 RBME01000002.1 Protein Homology CDS 59596 60834 . - 0 ID=cds-RUP90029.1;Parent=gene-D8M40_02955;Dbxref=NCBI_GP:RUP90029.1;Name=RUP90029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327446.1;locus_tag=D8M40_02955;product=exodeoxyribonuclease VII large subunit;protein_id=RUP90029.1;transl_table=11 RBME01000002.1 Genbank gene 60942 61931 . + . ID=gene-D8M40_02960;Name=D8M40_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02960 RBME01000002.1 Protein Homology CDS 60942 61931 . + 0 ID=cds-RUP89887.1;Parent=gene-D8M40_02960;Dbxref=NCBI_GP:RUP89887.1;Name=RUP89887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119938.1;locus_tag=D8M40_02960;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=RUP89887.1;transl_table=11 RBME01000002.1 Genbank gene 61976 62749 . - . ID=gene-D8M40_02965;Name=D8M40_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02965 RBME01000002.1 GeneMarkS+ CDS 61976 62749 . - 0 ID=cds-RUP89888.1;Parent=gene-D8M40_02965;Dbxref=NCBI_GP:RUP89888.1;Name=RUP89888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02965;product=hypothetical protein;protein_id=RUP89888.1;transl_table=11 RBME01000002.1 Genbank gene 62833 64029 . - . ID=gene-D8M40_02970;Name=D8M40_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02970 RBME01000002.1 Protein Homology CDS 62833 64029 . - 0 ID=cds-RUP89889.1;Parent=gene-D8M40_02970;Dbxref=NCBI_GP:RUP89889.1;Name=RUP89889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119940.1;locus_tag=D8M40_02970;product=DNA recombination protein RmuC;protein_id=RUP89889.1;transl_table=11 RBME01000002.1 Genbank gene 64057 65559 . - . ID=gene-D8M40_02975;Name=D8M40_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02975 RBME01000002.1 Protein Homology CDS 64057 65559 . - 0 ID=cds-RUP89890.1;Parent=gene-D8M40_02975;Dbxref=NCBI_GP:RUP89890.1;Name=RUP89890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119941.1;locus_tag=D8M40_02975;product=AI-2E family transporter;protein_id=RUP89890.1;transl_table=11 RBME01000002.1 Genbank gene 65646 66731 . + . ID=gene-D8M40_02980;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=D8M40_02980 RBME01000002.1 Protein Homology CDS 65646 66731 . + 0 ID=cds-RUP89891.1;Parent=gene-D8M40_02980;Dbxref=NCBI_GP:RUP89891.1;Name=RUP89891.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187319.1;locus_tag=D8M40_02980;product=redox-regulated ATPase YchF;protein_id=RUP89891.1;transl_table=11 RBME01000002.1 Genbank gene 66737 67429 . + . ID=gene-D8M40_02985;Name=D8M40_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02985 RBME01000002.1 Protein Homology CDS 66737 67429 . + 0 ID=cds-RUP89892.1;Parent=gene-D8M40_02985;Dbxref=NCBI_GP:RUP89892.1;Name=RUP89892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119943.1;locus_tag=D8M40_02985;product=VUT family protein;protein_id=RUP89892.1;transl_table=11 RBME01000002.1 Genbank gene 67473 68237 . + . ID=gene-D8M40_02990;Name=D8M40_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02990 RBME01000002.1 Protein Homology CDS 67473 68237 . + 0 ID=cds-RUP89893.1;Parent=gene-D8M40_02990;Dbxref=NCBI_GP:RUP89893.1;Name=RUP89893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119944.1;locus_tag=D8M40_02990;product=PIG-L family deacetylase;protein_id=RUP89893.1;transl_table=11 RBME01000002.1 Genbank gene 68218 68973 . - . ID=gene-D8M40_02995;Name=D8M40_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_02995 RBME01000002.1 GeneMarkS+ CDS 68218 68973 . - 0 ID=cds-RUP89894.1;Parent=gene-D8M40_02995;Dbxref=NCBI_GP:RUP89894.1;Name=RUP89894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_02995;product=hypothetical protein;protein_id=RUP89894.1;transl_table=11 RBME01000002.1 Genbank gene 69104 69871 . + . ID=gene-D8M40_03000;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=D8M40_03000 RBME01000002.1 Protein Homology CDS 69104 69871 . + 0 ID=cds-RUP89895.1;Parent=gene-D8M40_03000;Dbxref=NCBI_GP:RUP89895.1;Name=RUP89895.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119946.1;locus_tag=D8M40_03000;product=zinc transporter ZupT;protein_id=RUP89895.1;transl_table=11 RBME01000002.1 Genbank gene 69883 70479 . - . ID=gene-D8M40_03005;Name=D8M40_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03005 RBME01000002.1 Protein Homology CDS 69883 70479 . - 0 ID=cds-RUP89896.1;Parent=gene-D8M40_03005;Dbxref=NCBI_GP:RUP89896.1;Name=RUP89896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119947.1;locus_tag=D8M40_03005;product=DUF402 domain-containing protein;protein_id=RUP89896.1;transl_table=11 RBME01000002.1 Genbank gene 70494 71240 . - . ID=gene-D8M40_03010;Name=D8M40_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03010 RBME01000002.1 Protein Homology CDS 70494 71240 . - 0 ID=cds-RUP89897.1;Parent=gene-D8M40_03010;Dbxref=NCBI_GP:RUP89897.1;Name=RUP89897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119948.1;locus_tag=D8M40_03010;product=hypothetical protein;protein_id=RUP89897.1;transl_table=11 RBME01000002.1 Genbank gene 71613 73517 . + . ID=gene-D8M40_03015;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=D8M40_03015 RBME01000002.1 Protein Homology CDS 71613 73517 . + 0 ID=cds-RUP89898.1;Parent=gene-D8M40_03015;Dbxref=NCBI_GP:RUP89898.1;Name=RUP89898.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187273.1;locus_tag=D8M40_03015;product=translational GTPase TypA;protein_id=RUP89898.1;transl_table=11 RBME01000002.1 Genbank gene 73590 75524 . + . ID=gene-D8M40_03020;Name=D8M40_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03020 RBME01000002.1 Protein Homology CDS 73590 75524 . + 0 ID=cds-RUP89899.1;Parent=gene-D8M40_03020;Dbxref=NCBI_GP:RUP89899.1;Name=RUP89899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00496.20;locus_tag=D8M40_03020;product=hypothetical protein;protein_id=RUP89899.1;transl_table=11 RBME01000002.1 Genbank gene 75621 76472 . + . ID=gene-D8M40_03025;Name=D8M40_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03025 RBME01000002.1 Protein Homology CDS 75621 76472 . + 0 ID=cds-RUP89900.1;Parent=gene-D8M40_03025;Dbxref=NCBI_GP:RUP89900.1;Name=RUP89900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323555.1;locus_tag=D8M40_03025;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=RUP89900.1;transl_table=11 RBME01000002.1 Genbank gene 76457 76873 . + . ID=gene-D8M40_03030;Name=D8M40_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03030 RBME01000002.1 GeneMarkS+ CDS 76457 76873 . + 0 ID=cds-RUP89901.1;Parent=gene-D8M40_03030;Dbxref=NCBI_GP:RUP89901.1;Name=RUP89901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03030;product=hypothetical protein;protein_id=RUP89901.1;transl_table=11 RBME01000002.1 Genbank gene 76870 77202 . + . ID=gene-D8M40_03035;Name=D8M40_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03035 RBME01000002.1 Protein Homology CDS 76870 77202 . + 0 ID=cds-RUP89902.1;Parent=gene-D8M40_03035;Dbxref=NCBI_GP:RUP89902.1;Name=RUP89902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022271.1;locus_tag=D8M40_03035;product=ferredoxin family protein;protein_id=RUP89902.1;transl_table=11 RBME01000002.1 Genbank gene 77283 78377 . + . ID=gene-D8M40_03040;Name=D8M40_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03040 RBME01000002.1 Protein Homology CDS 77283 78377 . + 0 ID=cds-RUP89903.1;Parent=gene-D8M40_03040;Dbxref=NCBI_GP:RUP89903.1;Name=RUP89903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119954.1;locus_tag=D8M40_03040;product=succinyldiaminopimelate transaminase;protein_id=RUP89903.1;transl_table=11 RBME01000002.1 Genbank gene 78490 78993 . + . ID=gene-D8M40_03045;Name=D8M40_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03045 RBME01000002.1 Protein Homology CDS 78490 78993 . + 0 ID=cds-RUP90030.1;Parent=gene-D8M40_03045;Dbxref=NCBI_GP:RUP90030.1;Name=RUP90030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527089.1;locus_tag=D8M40_03045;product=GtrA family protein;protein_id=RUP90030.1;transl_table=11 RBME01000002.1 Genbank gene 79015 79986 . - . ID=gene-D8M40_03050;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=D8M40_03050 RBME01000002.1 Protein Homology CDS 79015 79986 . - 0 ID=cds-RUP89904.1;Parent=gene-D8M40_03050;Dbxref=NCBI_GP:RUP89904.1;Name=RUP89904.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848534.1;locus_tag=D8M40_03050;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=RUP89904.1;transl_table=11 RBME01000002.1 Genbank gene 80138 81469 . - . ID=gene-D8M40_03055;Name=D8M40_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03055 RBME01000002.1 Protein Homology CDS 80138 81469 . - 0 ID=cds-RUP90031.1;Parent=gene-D8M40_03055;Dbxref=NCBI_GP:RUP90031.1;Name=RUP90031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400547.1;locus_tag=D8M40_03055;product=amino acid permease;protein_id=RUP90031.1;transl_table=11 RBME01000002.1 Genbank gene 81543 81731 . + . ID=gene-D8M40_03060;Name=D8M40_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03060 RBME01000002.1 GeneMarkS+ CDS 81543 81731 . + 0 ID=cds-RUP89905.1;Parent=gene-D8M40_03060;Dbxref=NCBI_GP:RUP89905.1;Name=RUP89905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03060;product=hypothetical protein;protein_id=RUP89905.1;transl_table=11 RBME01000002.1 Genbank gene 81828 82964 . + . ID=gene-D8M40_03065;Name=D8M40_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03065 RBME01000002.1 Protein Homology CDS 81828 82964 . + 0 ID=cds-RUP90032.1;Parent=gene-D8M40_03065;Dbxref=NCBI_GP:RUP90032.1;Name=RUP90032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187247.1;locus_tag=D8M40_03065;product=succinyl-diaminopimelate desuccinylase;protein_id=RUP90032.1;transl_table=11 RBME01000002.1 Genbank gene 83087 83821 . + . ID=gene-D8M40_03070;Name=D8M40_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03070 RBME01000002.1 Protein Homology CDS 83087 83821 . + 0 ID=cds-RUP90033.1;Parent=gene-D8M40_03070;Dbxref=NCBI_GP:RUP90033.1;Name=RUP90033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014522175.1;locus_tag=D8M40_03070;product=TIGR00730 family Rossman fold protein;protein_id=RUP90033.1;transl_table=11 RBME01000002.1 Genbank gene 83808 84638 . + . ID=gene-D8M40_03075;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D8M40_03075 RBME01000002.1 Protein Homology CDS 83808 84638 . + 0 ID=cds-RUP89906.1;Parent=gene-D8M40_03075;Dbxref=NCBI_GP:RUP89906.1;Name=RUP89906.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327507.1;locus_tag=D8M40_03075;product=dihydropteroate synthase;protein_id=RUP89906.1;transl_table=11 RBME01000002.1 Genbank gene 84692 85465 . + . ID=gene-D8M40_03080;Name=D8M40_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03080 RBME01000002.1 Protein Homology CDS 84692 85465 . + 0 ID=cds-RUP89907.1;Parent=gene-D8M40_03080;Dbxref=NCBI_GP:RUP89907.1;Name=RUP89907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531898.1;locus_tag=D8M40_03080;product=glucosyl-3-phosphoglycerate synthase;protein_id=RUP89907.1;transl_table=11 RBME01000002.1 Genbank gene 85651 85923 . + . ID=gene-D8M40_03085;Name=D8M40_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03085 RBME01000002.1 Protein Homology CDS 85651 85923 . + 0 ID=cds-RUP90034.1;Parent=gene-D8M40_03085;Dbxref=NCBI_GP:RUP90034.1;Name=RUP90034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118731.1;locus_tag=D8M40_03085;product=DivIVA domain-containing protein;protein_id=RUP90034.1;transl_table=11 RBME01000002.1 Genbank gene 85933 86829 . + . ID=gene-D8M40_03090;Name=D8M40_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03090 RBME01000002.1 Protein Homology CDS 85933 86829 . + 0 ID=cds-RUP89908.1;Parent=gene-D8M40_03090;Dbxref=NCBI_GP:RUP89908.1;Name=RUP89908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822897.1;locus_tag=D8M40_03090;product=SAM-dependent methyltransferase;protein_id=RUP89908.1;transl_table=11 RBME01000002.1 Genbank gene 86843 88324 . - . ID=gene-D8M40_03095;Name=D8M40_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03095 RBME01000002.1 Protein Homology CDS 86843 88324 . - 0 ID=cds-RUP89909.1;Parent=gene-D8M40_03095;Dbxref=NCBI_GP:RUP89909.1;Name=RUP89909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119965.1;locus_tag=D8M40_03095;product=glycoside hydrolase family 32 protein;protein_id=RUP89909.1;transl_table=11 RBME01000002.1 Genbank gene 88445 89074 . - . ID=gene-D8M40_03100;Name=D8M40_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03100 RBME01000002.1 Protein Homology CDS 88445 89074 . - 0 ID=cds-RUP89910.1;Parent=gene-D8M40_03100;Dbxref=NCBI_GP:RUP89910.1;Name=RUP89910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187229.1;locus_tag=D8M40_03100;product=O-methyltransferase;protein_id=RUP89910.1;transl_table=11 RBME01000002.1 Genbank gene 89265 89951 . + . ID=gene-D8M40_03105;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=D8M40_03105 RBME01000002.1 Protein Homology CDS 89265 89951 . + 0 ID=cds-RUP90035.1;Parent=gene-D8M40_03105;Dbxref=NCBI_GP:RUP90035.1;Name=RUP90035.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301708.1;locus_tag=D8M40_03105;product=RNA polymerase sigma factor SigE;protein_id=RUP90035.1;transl_table=11 RBME01000002.1 Genbank gene 89966 90517 . + . ID=gene-D8M40_03110;Name=D8M40_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03110 RBME01000002.1 GeneMarkS+ CDS 89966 90517 . + 0 ID=cds-RUP89911.1;Parent=gene-D8M40_03110;Dbxref=NCBI_GP:RUP89911.1;Name=RUP89911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03110;product=hypothetical protein;protein_id=RUP89911.1;transl_table=11 RBME01000002.1 Genbank gene 90558 91079 . + . ID=gene-D8M40_03115;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=D8M40_03115 RBME01000002.1 Protein Homology CDS 90558 91079 . + 0 ID=cds-RUP89912.1;Parent=gene-D8M40_03115;Dbxref=NCBI_GP:RUP89912.1;Name=RUP89912.1;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295852.1;locus_tag=D8M40_03115;product=twin-arginine translocase subunit TatB;protein_id=RUP89912.1;transl_table=11 RBME01000002.1 Genbank gene 91154 92278 . - . ID=gene-D8M40_03120;Name=D8M40_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03120 RBME01000002.1 Protein Homology CDS 91154 92278 . - 0 ID=cds-RUP89913.1;Parent=gene-D8M40_03120;Dbxref=NCBI_GP:RUP89913.1;Name=RUP89913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400563.1;locus_tag=D8M40_03120;product=MRP family ATP-binding protein;protein_id=RUP89913.1;transl_table=11 RBME01000002.1 Genbank gene 92477 93073 . + . ID=gene-D8M40_03125;Name=D8M40_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03125 RBME01000002.1 GeneMarkS+ CDS 92477 93073 . + 0 ID=cds-RUP89914.1;Parent=gene-D8M40_03125;Dbxref=NCBI_GP:RUP89914.1;Name=RUP89914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03125;product=hypothetical protein;protein_id=RUP89914.1;transl_table=11 RBME01000002.1 Genbank gene 93057 93959 . - . ID=gene-D8M40_03130;Name=D8M40_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03130 RBME01000002.1 Protein Homology CDS 93057 93959 . - 0 ID=cds-RUP89915.1;Parent=gene-D8M40_03130;Dbxref=NCBI_GP:RUP89915.1;Name=RUP89915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119060.1;locus_tag=D8M40_03130;product=fumarylacetoacetate hydrolase family protein;protein_id=RUP89915.1;transl_table=11 RBME01000002.1 Genbank gene 94088 97864 . - . ID=gene-D8M40_03135;Name=D8M40_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03135 RBME01000002.1 Protein Homology CDS 94088 97864 . - 0 ID=cds-RUP89916.1;Parent=gene-D8M40_03135;Dbxref=NCBI_GP:RUP89916.1;Name=RUP89916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022239.1;locus_tag=D8M40_03135;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=RUP89916.1;transl_table=11 RBME01000002.1 Genbank gene 98037 99614 . + . ID=gene-D8M40_03140;Name=D8M40_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03140 RBME01000002.1 Protein Homology CDS 98037 99614 . + 0 ID=cds-RUP89917.1;Parent=gene-D8M40_03140;Dbxref=NCBI_GP:RUP89917.1;Name=RUP89917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400573.1;locus_tag=D8M40_03140;product=carboxylesterase/lipase family protein;protein_id=RUP89917.1;transl_table=11 RBME01000002.1 Genbank gene 99639 100337 . + . ID=gene-D8M40_03145;Name=D8M40_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03145 RBME01000002.1 GeneMarkS+ CDS 99639 100337 . + 0 ID=cds-RUP89918.1;Parent=gene-D8M40_03145;Dbxref=NCBI_GP:RUP89918.1;Name=RUP89918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03145;product=hypothetical protein;protein_id=RUP89918.1;transl_table=11 RBME01000002.1 Genbank gene 100386 100892 . - . ID=gene-D8M40_03150;Name=D8M40_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03150 RBME01000002.1 GeneMarkS+ CDS 100386 100892 . - 0 ID=cds-RUP89919.1;Parent=gene-D8M40_03150;Dbxref=NCBI_GP:RUP89919.1;Name=RUP89919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03150;product=hypothetical protein;protein_id=RUP89919.1;transl_table=11 RBME01000002.1 Genbank gene 101020 102318 . + . ID=gene-D8M40_03155;Name=D8M40_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03155 RBME01000002.1 Protein Homology CDS 101020 102318 . + 0 ID=cds-RUP89920.1;Parent=gene-D8M40_03155;Dbxref=NCBI_GP:RUP89920.1;Name=RUP89920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119977.1;locus_tag=D8M40_03155;product=MFS transporter;protein_id=RUP89920.1;transl_table=11 RBME01000002.1 Genbank gene 102361 103308 . - . ID=gene-D8M40_03160;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=D8M40_03160 RBME01000002.1 Protein Homology CDS 102361 103308 . - 0 ID=cds-RUP89921.1;Parent=gene-D8M40_03160;Dbxref=NCBI_GP:RUP89921.1;Name=RUP89921.1;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119978.1;locus_tag=D8M40_03160;product=formimidoylglutamase;protein_id=RUP89921.1;transl_table=11 RBME01000002.1 Genbank gene 103423 105363 . + . ID=gene-D8M40_03165;Name=D8M40_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03165 RBME01000002.1 Protein Homology CDS 103423 105363 . + 0 ID=cds-RUP89922.1;Parent=gene-D8M40_03165;Dbxref=NCBI_GP:RUP89922.1;Name=RUP89922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119979.1;locus_tag=D8M40_03165;product=DEAD/DEAH box helicase;protein_id=RUP89922.1;transl_table=11 RBME01000002.1 Genbank gene 105507 105980 . - . ID=gene-D8M40_03170;Name=D8M40_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03170 RBME01000002.1 Protein Homology CDS 105507 105980 . - 0 ID=cds-RUP89923.1;Parent=gene-D8M40_03170;Dbxref=NCBI_GP:RUP89923.1;Name=RUP89923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822931.1;locus_tag=D8M40_03170;product=DUF2269 domain-containing protein;protein_id=RUP89923.1;transl_table=11 RBME01000002.1 Genbank gene 106051 106842 . - . ID=gene-D8M40_03175;Name=D8M40_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03175 RBME01000002.1 Protein Homology CDS 106051 106842 . - 0 ID=cds-RUP89924.1;Parent=gene-D8M40_03175;Dbxref=NCBI_GP:RUP89924.1;Name=RUP89924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327589.1;locus_tag=D8M40_03175;product=HNH endonuclease;protein_id=RUP89924.1;transl_table=11 RBME01000002.1 Genbank gene 106956 108521 . - . ID=gene-D8M40_03180;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=D8M40_03180 RBME01000002.1 Protein Homology CDS 106956 108521 . - 0 ID=cds-RUP89925.1;Parent=gene-D8M40_03180;Dbxref=NCBI_GP:RUP89925.1;Name=RUP89925.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187160.1;locus_tag=D8M40_03180;product=sodium/proline symporter PutP;protein_id=RUP89925.1;transl_table=11 RBME01000002.1 Genbank gene 108746 110317 . - . ID=gene-D8M40_03185;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=D8M40_03185 RBME01000002.1 Protein Homology CDS 108746 110317 . - 0 ID=cds-RUP89926.1;Parent=gene-D8M40_03185;Dbxref=NCBI_GP:RUP89926.1;Name=RUP89926.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187160.1;locus_tag=D8M40_03185;product=sodium/proline symporter PutP;protein_id=RUP89926.1;transl_table=11 RBME01000002.1 Genbank gene 110692 113796 . + . ID=gene-D8M40_03190;Name=D8M40_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03190 RBME01000002.1 Protein Homology CDS 110692 113796 . + 0 ID=cds-RUP89927.1;Parent=gene-D8M40_03190;Dbxref=NCBI_GP:RUP89927.1;Name=RUP89927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848605.1;locus_tag=D8M40_03190;product=DEAD/DEAH box helicase;protein_id=RUP89927.1;transl_table=11 RBME01000002.1 Genbank gene 113799 114671 . + . ID=gene-D8M40_03195;Name=D8M40_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03195 RBME01000002.1 Protein Homology CDS 113799 114671 . + 0 ID=cds-RUP89928.1;Parent=gene-D8M40_03195;Dbxref=NCBI_GP:RUP89928.1;Name=RUP89928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119984.1;locus_tag=D8M40_03195;product=hypothetical protein;protein_id=RUP89928.1;transl_table=11 RBME01000002.1 Genbank gene 114701 115891 . + . ID=gene-D8M40_03200;Name=D8M40_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03200 RBME01000002.1 Protein Homology CDS 114701 115891 . + 0 ID=cds-RUP89929.1;Parent=gene-D8M40_03200;Dbxref=NCBI_GP:RUP89929.1;Name=RUP89929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119985.1;locus_tag=D8M40_03200;product=DNA repair exonuclease;protein_id=RUP89929.1;transl_table=11 RBME01000002.1 Genbank gene 115888 118830 . + . ID=gene-D8M40_03205;Name=D8M40_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03205 RBME01000002.1 Protein Homology CDS 115888 118830 . + 0 ID=cds-RUP89930.1;Parent=gene-D8M40_03205;Dbxref=NCBI_GP:RUP89930.1;Name=RUP89930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13476.4;locus_tag=D8M40_03205;product=hypothetical protein;protein_id=RUP89930.1;transl_table=11 RBME01000002.1 Genbank gene 118920 119432 . + . ID=gene-D8M40_03210;Name=D8M40_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03210 RBME01000002.1 Protein Homology CDS 118920 119432 . + 0 ID=cds-RUP90036.1;Parent=gene-D8M40_03210;Dbxref=NCBI_GP:RUP90036.1;Name=RUP90036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119987.1;locus_tag=D8M40_03210;product=MarR family transcriptional regulator;protein_id=RUP90036.1;transl_table=11 RBME01000002.1 Genbank gene 119522 119595 . - . ID=gene-D8M40_03215;Name=D8M40_03215;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03215 RBME01000002.1 tRNAscan-SE tRNA 119522 119595 . - . ID=rna-D8M40_03215;Parent=gene-D8M40_03215;anticodon=(pos:complement(119559..119561));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03215;product=tRNA-Arg RBME01000002.1 tRNAscan-SE exon 119522 119595 . - . ID=exon-D8M40_03215-1;Parent=rna-D8M40_03215;anticodon=(pos:complement(119559..119561));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03215;product=tRNA-Arg RBME01000002.1 Genbank gene 119693 121309 . - . ID=gene-D8M40_03220;Name=D8M40_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03220 RBME01000002.1 Protein Homology CDS 119693 121309 . - 0 ID=cds-RUP89931.1;Parent=gene-D8M40_03220;Dbxref=NCBI_GP:RUP89931.1;Name=RUP89931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119988.1;locus_tag=D8M40_03220;product=alpha/beta hydrolase;protein_id=RUP89931.1;transl_table=11 RBME01000002.1 Genbank gene 121491 123143 . + . ID=gene-D8M40_03225;Name=D8M40_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03225 RBME01000002.1 Protein Homology CDS 121491 123143 . + 0 ID=cds-RUP89932.1;Parent=gene-D8M40_03225;Dbxref=NCBI_GP:RUP89932.1;Name=RUP89932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861289.1;locus_tag=D8M40_03225;product=arginine--tRNA ligase;protein_id=RUP89932.1;transl_table=11 RBME01000002.1 Genbank gene 123148 124503 . + . ID=gene-D8M40_03230;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=D8M40_03230 RBME01000002.1 Protein Homology CDS 123148 124503 . + 0 ID=cds-RUP89933.1;Parent=gene-D8M40_03230;Dbxref=NCBI_GP:RUP89933.1;Name=RUP89933.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119990.1;locus_tag=D8M40_03230;product=diaminopimelate decarboxylase;protein_id=RUP89933.1;transl_table=11 RBME01000002.1 Genbank gene 124655 125986 . + . ID=gene-D8M40_03235;Name=D8M40_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03235 RBME01000002.1 Protein Homology CDS 124655 125986 . + 0 ID=cds-RUP89934.1;Parent=gene-D8M40_03235;Dbxref=NCBI_GP:RUP89934.1;Name=RUP89934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119991.1;locus_tag=D8M40_03235;product=homoserine dehydrogenase;protein_id=RUP89934.1;transl_table=11 RBME01000002.1 Genbank gene 126011 126940 . + . ID=gene-D8M40_03240;Name=D8M40_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03240 RBME01000002.1 Protein Homology CDS 126011 126940 . + 0 ID=cds-RUP89935.1;Parent=gene-D8M40_03240;Dbxref=NCBI_GP:RUP89935.1;Name=RUP89935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532011.1;locus_tag=D8M40_03240;product=homoserine kinase;protein_id=RUP89935.1;transl_table=11 RBME01000002.1 Genbank gene 127001 128986 . - . ID=gene-D8M40_03245;Name=D8M40_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03245 RBME01000002.1 Protein Homology CDS 127001 128986 . - 0 ID=cds-RUP89936.1;Parent=gene-D8M40_03245;Dbxref=NCBI_GP:RUP89936.1;Name=RUP89936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25%2CHMM:PF03459.15;locus_tag=D8M40_03245;product=ATP-binding cassette domain-containing protein;protein_id=RUP89936.1;transl_table=11 RBME01000002.1 Genbank gene 129027 129848 . - . ID=gene-D8M40_03250;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=D8M40_03250 RBME01000002.1 Protein Homology CDS 129027 129848 . - 0 ID=cds-RUP89937.1;Parent=gene-D8M40_03250;Dbxref=NCBI_GP:RUP89937.1;Name=RUP89937.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327619.1;locus_tag=D8M40_03250;product=molybdate ABC transporter substrate-binding protein;protein_id=RUP89937.1;transl_table=11 RBME01000002.1 Genbank gene 129872 130744 . - . ID=gene-D8M40_03255;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=D8M40_03255 RBME01000002.1 Protein Homology CDS 129872 130744 . - 0 ID=cds-RUP89938.1;Parent=gene-D8M40_03255;Dbxref=NCBI_GP:RUP89938.1;Name=RUP89938.1;gbkey=CDS;gene=fdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527776.1;locus_tag=D8M40_03255;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=RUP89938.1;transl_table=11 RBME01000002.1 Genbank gene 130834 131094 . - . ID=gene-D8M40_03260;Name=D8M40_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03260 RBME01000002.1 Protein Homology CDS 130834 131094 . - 0 ID=cds-RUP90037.1;Parent=gene-D8M40_03260;Dbxref=NCBI_GP:RUP90037.1;Name=RUP90037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599468.1;locus_tag=D8M40_03260;product=MoaD/ThiS family protein;protein_id=RUP90037.1;transl_table=11 RBME01000002.1 Genbank gene 131218 132561 . + . ID=gene-D8M40_03265;Name=D8M40_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03265 RBME01000002.1 Protein Homology CDS 131218 132561 . + 0 ID=cds-RUP89939.1;Parent=gene-D8M40_03265;Dbxref=NCBI_GP:RUP89939.1;Name=RUP89939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441923.1;locus_tag=D8M40_03265;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP89939.1;transl_table=11 RBME01000002.1 Genbank gene 132687 134228 . + . ID=gene-D8M40_03270;Name=D8M40_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03270 RBME01000002.1 Protein Homology CDS 132687 134228 . + 0 ID=cds-RUP89940.1;Parent=gene-D8M40_03270;Dbxref=NCBI_GP:RUP89940.1;Name=RUP89940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015779317.1;locus_tag=D8M40_03270;product=MFS transporter;protein_id=RUP89940.1;transl_table=11 RBME01000002.1 Genbank gene 134473 134958 . + . ID=gene-D8M40_03275;Name=D8M40_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03275 RBME01000002.1 Protein Homology CDS 134473 134958 . + 0 ID=cds-RUP90038.1;Parent=gene-D8M40_03275;Dbxref=NCBI_GP:RUP90038.1;Name=RUP90038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849745.1;locus_tag=D8M40_03275;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=RUP90038.1;transl_table=11 RBME01000002.1 Genbank gene 134939 135439 . + . ID=gene-D8M40_03280;Name=D8M40_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03280 RBME01000002.1 Protein Homology CDS 134939 135439 . + 0 ID=cds-RUP89941.1;Parent=gene-D8M40_03280;Dbxref=NCBI_GP:RUP89941.1;Name=RUP89941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120000.1;locus_tag=D8M40_03280;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=RUP89941.1;transl_table=11 RBME01000002.1 Genbank gene 135495 136709 . + . ID=gene-D8M40_03285;Name=D8M40_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03285 RBME01000002.1 Protein Homology CDS 135495 136709 . + 0 ID=cds-RUP89942.1;Parent=gene-D8M40_03285;Dbxref=NCBI_GP:RUP89942.1;Name=RUP89942.1;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120001.1;locus_tag=D8M40_03285;product=molybdopterin biosynthesis protein MoeB;protein_id=RUP89942.1;transl_table=11 RBME01000002.1 Genbank gene 136706 137338 . - . ID=gene-D8M40_03290;Name=D8M40_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03290 RBME01000002.1 Protein Homology CDS 136706 137338 . - 0 ID=cds-RUP89943.1;Parent=gene-D8M40_03290;Dbxref=NCBI_GP:RUP89943.1;Name=RUP89943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12804.5;locus_tag=D8M40_03290;product=molybdenum cofactor guanylyltransferase;protein_id=RUP89943.1;transl_table=11 RBME01000002.1 Genbank gene 137367 137846 . - . ID=gene-D8M40_03295;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=D8M40_03295 RBME01000002.1 Protein Homology CDS 137367 137846 . - 0 ID=cds-RUP89944.1;Parent=gene-D8M40_03295;Dbxref=NCBI_GP:RUP89944.1;Name=RUP89944.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120003.1;locus_tag=D8M40_03295;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=RUP89944.1;transl_table=11 RBME01000002.1 Genbank gene 137871 139277 . - . ID=gene-D8M40_03300;Name=D8M40_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03300 RBME01000002.1 Protein Homology CDS 137871 139277 . - 0 ID=cds-RUP89945.1;Parent=gene-D8M40_03300;Dbxref=NCBI_GP:RUP89945.1;Name=RUP89945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00994.22%2CHMM:PF03453.15;locus_tag=D8M40_03300;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP89945.1;transl_table=11 RBME01000002.1 Genbank gene 139293 140411 . - . ID=gene-D8M40_03305;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=D8M40_03305 RBME01000002.1 Protein Homology CDS 139293 140411 . - 0 ID=cds-RUP89946.1;Parent=gene-D8M40_03305;Dbxref=NCBI_GP:RUP89946.1;Name=RUP89946.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120005.1;locus_tag=D8M40_03305;product=GTP 3'%2C8-cyclase MoaA;protein_id=RUP89946.1;transl_table=11 RBME01000002.1 Genbank gene 140487 142298 . - . ID=gene-D8M40_03310;Name=D8M40_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03310 RBME01000002.1 Protein Homology CDS 140487 142298 . - 0 ID=cds-RUP89947.1;Parent=gene-D8M40_03310;Dbxref=NCBI_GP:RUP89947.1;Name=RUP89947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120006.1;locus_tag=D8M40_03310;product=long-chain fatty-acid--CoA ligase;protein_id=RUP89947.1;transl_table=11 RBME01000002.1 Genbank gene 142815 144875 . + . ID=gene-D8M40_03315;Name=D8M40_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03315 RBME01000002.1 Protein Homology CDS 142815 144875 . + 0 ID=cds-RUP89948.1;Parent=gene-D8M40_03315;Dbxref=NCBI_GP:RUP89948.1;Name=RUP89948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120007.1;locus_tag=D8M40_03315;product=transcription termination factor Rho;protein_id=RUP89948.1;transl_table=11 RBME01000002.1 Genbank gene 144879 145952 . + . ID=gene-D8M40_03320;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=D8M40_03320 RBME01000002.1 Protein Homology CDS 144879 145952 . + 0 ID=cds-RUP89949.1;Parent=gene-D8M40_03320;Dbxref=NCBI_GP:RUP89949.1;Name=RUP89949.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187085.1;locus_tag=D8M40_03320;product=peptide chain release factor 1;protein_id=RUP89949.1;transl_table=11 RBME01000002.1 Genbank gene 145994 146839 . + . ID=gene-D8M40_03325;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=D8M40_03325 RBME01000002.1 Protein Homology CDS 145994 146839 . + 0 ID=cds-RUP90039.1;Parent=gene-D8M40_03325;Dbxref=NCBI_GP:RUP90039.1;Name=RUP90039.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400648.1;locus_tag=D8M40_03325;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=RUP90039.1;transl_table=11 RBME01000002.1 Genbank gene 146978 147640 . + . ID=gene-D8M40_03330;Name=D8M40_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03330 RBME01000002.1 Protein Homology CDS 146978 147640 . + 0 ID=cds-RUP89950.1;Parent=gene-D8M40_03330;Dbxref=NCBI_GP:RUP89950.1;Name=RUP89950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400649.1;locus_tag=D8M40_03330;product=threonylcarbamoyl-AMP synthase;protein_id=RUP89950.1;transl_table=11 RBME01000002.1 Genbank gene 147640 148815 . + . ID=gene-D8M40_03335;Name=D8M40_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03335 RBME01000002.1 Protein Homology CDS 147640 148815 . + 0 ID=cds-RUP89951.1;Parent=gene-D8M40_03335;Dbxref=NCBI_GP:RUP89951.1;Name=RUP89951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848672.1;locus_tag=D8M40_03335;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=RUP89951.1;transl_table=11 RBME01000002.1 Genbank gene 148874 149341 . + . ID=gene-D8M40_03340;Name=D8M40_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03340 RBME01000002.1 Protein Homology CDS 148874 149341 . + 0 ID=cds-RUP89952.1;Parent=gene-D8M40_03340;Dbxref=NCBI_GP:RUP89952.1;Name=RUP89952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120012.1;locus_tag=D8M40_03340;product=hypothetical protein;protein_id=RUP89952.1;transl_table=11 RBME01000002.1 Genbank gene 149758 150561 . + . ID=gene-D8M40_03345;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=D8M40_03345 RBME01000002.1 Protein Homology CDS 149758 150561 . + 0 ID=cds-RUP89953.1;Parent=gene-D8M40_03345;Dbxref=NCBI_GP:RUP89953.1;Name=RUP89953.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848676.1;locus_tag=D8M40_03345;product=ATP synthase F0 subunit A;protein_id=RUP89953.1;transl_table=11 RBME01000002.1 Genbank gene 150656 150892 . + . ID=gene-D8M40_03350;Name=D8M40_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03350 RBME01000002.1 Protein Homology CDS 150656 150892 . + 0 ID=cds-RUP89954.1;Parent=gene-D8M40_03350;Dbxref=NCBI_GP:RUP89954.1;Name=RUP89954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600432.1;locus_tag=D8M40_03350;product=ATP synthase F0 subunit C;protein_id=RUP89954.1;transl_table=11 RBME01000002.1 Genbank gene 150938 151507 . + . ID=gene-D8M40_03355;Name=D8M40_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03355 RBME01000002.1 Protein Homology CDS 150938 151507 . + 0 ID=cds-RUP89955.1;Parent=gene-D8M40_03355;Dbxref=NCBI_GP:RUP89955.1;Name=RUP89955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187072.1;locus_tag=D8M40_03355;product=F0F1 ATP synthase subunit B;protein_id=RUP89955.1;transl_table=11 RBME01000002.1 Genbank gene 151514 152341 . + . ID=gene-D8M40_03360;Name=D8M40_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03360 RBME01000002.1 Protein Homology CDS 151514 152341 . + 0 ID=cds-RUP89956.1;Parent=gene-D8M40_03360;Dbxref=NCBI_GP:RUP89956.1;Name=RUP89956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295780.1;locus_tag=D8M40_03360;product=F0F1 ATP synthase subunit delta;protein_id=RUP89956.1;transl_table=11 RBME01000002.1 Genbank gene 152387 154060 . + . ID=gene-D8M40_03365;Name=D8M40_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03365 RBME01000002.1 Protein Homology CDS 152387 154060 . + 0 ID=cds-RUP89957.1;Parent=gene-D8M40_03365;Dbxref=NCBI_GP:RUP89957.1;Name=RUP89957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580842.1;locus_tag=D8M40_03365;product=F0F1 ATP synthase subunit alpha;protein_id=RUP89957.1;transl_table=11 RBME01000002.1 Genbank gene 154117 155091 . + . ID=gene-D8M40_03370;Name=D8M40_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03370 RBME01000002.1 Protein Homology CDS 154117 155091 . + 0 ID=cds-RUP89958.1;Parent=gene-D8M40_03370;Dbxref=NCBI_GP:RUP89958.1;Name=RUP89958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120018.1;locus_tag=D8M40_03370;product=F0F1 ATP synthase subunit gamma;protein_id=RUP89958.1;transl_table=11 RBME01000002.1 Genbank gene 155095 156546 . + . ID=gene-D8M40_03375;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=D8M40_03375 RBME01000002.1 Protein Homology CDS 155095 156546 . + 0 ID=cds-RUP89959.1;Parent=gene-D8M40_03375;Dbxref=NCBI_GP:RUP89959.1;Name=RUP89959.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851105.1;locus_tag=D8M40_03375;product=F0F1 ATP synthase subunit beta;protein_id=RUP89959.1;transl_table=11 RBME01000002.1 Genbank gene 156563 156934 . + . ID=gene-D8M40_03380;Name=D8M40_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03380 RBME01000002.1 Protein Homology CDS 156563 156934 . + 0 ID=cds-RUP89960.1;Parent=gene-D8M40_03380;Dbxref=NCBI_GP:RUP89960.1;Name=RUP89960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120020.1;locus_tag=D8M40_03380;product=F0F1 ATP synthase subunit epsilon;protein_id=RUP89960.1;transl_table=11 RBME01000002.1 Genbank gene 157265 157711 . + . ID=gene-D8M40_03385;Name=D8M40_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03385 RBME01000002.1 Protein Homology CDS 157265 157711 . + 0 ID=cds-RUP90040.1;Parent=gene-D8M40_03385;Dbxref=NCBI_GP:RUP90040.1;Name=RUP90040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118671.1;locus_tag=D8M40_03385;product=DUF2550 family protein;protein_id=RUP90040.1;transl_table=11 RBME01000002.1 Genbank gene 157759 158451 . + . ID=gene-D8M40_03390;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=D8M40_03390 RBME01000002.1 Protein Homology CDS 157759 158451 . + 0 ID=cds-RUP89961.1;Parent=gene-D8M40_03390;Dbxref=NCBI_GP:RUP89961.1;Name=RUP89961.1;gbkey=CDS;gene=nucS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600440.1;locus_tag=D8M40_03390;product=endonuclease NucS;protein_id=RUP89961.1;transl_table=11 RBME01000002.1 Genbank gene 158551 158793 . + . ID=gene-D8M40_03395;Name=D8M40_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03395 RBME01000002.1 Protein Homology CDS 158551 158793 . + 0 ID=cds-RUP90041.1;Parent=gene-D8M40_03395;Dbxref=NCBI_GP:RUP90041.1;Name=RUP90041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_694646.1;locus_tag=D8M40_03395;product=hypothetical protein;protein_id=RUP90041.1;transl_table=11 RBME01000002.1 Genbank gene 158907 159203 . + . ID=gene-D8M40_03400;Name=D8M40_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03400 RBME01000002.1 Protein Homology CDS 158907 159203 . + 0 ID=cds-RUP89962.1;Parent=gene-D8M40_03400;Dbxref=NCBI_GP:RUP89962.1;Name=RUP89962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527456.1;locus_tag=D8M40_03400;product=thiamine-binding protein;protein_id=RUP89962.1;transl_table=11 RBME01000002.1 Genbank gene 159287 160291 . + . ID=gene-D8M40_03405;Name=D8M40_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03405 RBME01000002.1 Protein Homology CDS 159287 160291 . + 0 ID=cds-RUP89963.1;Parent=gene-D8M40_03405;Dbxref=NCBI_GP:RUP89963.1;Name=RUP89963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187047.1;locus_tag=D8M40_03405;product=co-chaperone YbbN;protein_id=RUP89963.1;transl_table=11 RBME01000002.1 Genbank gene 160449 161300 . + . ID=gene-D8M40_03410;Name=D8M40_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03410 RBME01000002.1 Protein Homology CDS 160449 161300 . + 0 ID=cds-RUP89964.1;Parent=gene-D8M40_03410;Dbxref=NCBI_GP:RUP89964.1;Name=RUP89964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532084.1;locus_tag=D8M40_03410;product=ABC transporter ATP-binding protein;protein_id=RUP89964.1;transl_table=11 RBME01000002.1 Genbank gene 161322 162203 . + . ID=gene-D8M40_03415;Name=D8M40_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03415 RBME01000002.1 Protein Homology CDS 161322 162203 . + 0 ID=cds-RUP89965.1;Parent=gene-D8M40_03415;Dbxref=NCBI_GP:RUP89965.1;Name=RUP89965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022164.1;locus_tag=D8M40_03415;product=NUDIX domain-containing protein;protein_id=RUP89965.1;transl_table=11 RBME01000002.1 Genbank gene 162380 163183 . + . ID=gene-D8M40_03420;Name=D8M40_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03420 RBME01000002.1 Protein Homology CDS 162380 163183 . + 0 ID=cds-RUP89966.1;Parent=gene-D8M40_03420;Dbxref=NCBI_GP:RUP89966.1;Name=RUP89966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848701.1;locus_tag=D8M40_03420;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=RUP89966.1;transl_table=11 RBME01000002.1 Genbank gene 163211 164176 . + . ID=gene-D8M40_03425;Name=D8M40_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03425 RBME01000002.1 Protein Homology CDS 163211 164176 . + 0 ID=cds-RUP89967.1;Parent=gene-D8M40_03425;Dbxref=NCBI_GP:RUP89967.1;Name=RUP89967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934785.1;locus_tag=D8M40_03425;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=RUP89967.1;transl_table=11 RBME01000002.1 Genbank gene 164225 165346 . + . ID=gene-D8M40_03430;Name=D8M40_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03430 RBME01000002.1 Protein Homology CDS 164225 165346 . + 0 ID=cds-RUP89968.1;Parent=gene-D8M40_03430;Dbxref=NCBI_GP:RUP89968.1;Name=RUP89968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848705.1;locus_tag=D8M40_03430;product=cysteine desulfurase;protein_id=RUP89968.1;transl_table=11 RBME01000002.1 Genbank gene 165351 166190 . - . ID=gene-D8M40_03435;Name=D8M40_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03435 RBME01000002.1 Protein Homology CDS 165351 166190 . - 0 ID=cds-RUP89969.1;Parent=gene-D8M40_03435;Dbxref=NCBI_GP:RUP89969.1;Name=RUP89969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120031.1;locus_tag=D8M40_03435;product=spermidine synthase;protein_id=RUP89969.1;transl_table=11 RBME01000002.1 Genbank gene 166264 167355 . + . ID=gene-D8M40_03440;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=D8M40_03440 RBME01000002.1 Protein Homology CDS 166264 167355 . + 0 ID=cds-RUP89970.1;Parent=gene-D8M40_03440;Dbxref=NCBI_GP:RUP89970.1;Name=RUP89970.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527532.1;locus_tag=D8M40_03440;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=RUP89970.1;transl_table=11 RBME01000002.1 Genbank gene 167394 168449 . + . ID=gene-D8M40_03445;Name=D8M40_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03445 RBME01000002.1 GeneMarkS+ CDS 167394 168449 . + 0 ID=cds-RUP89971.1;Parent=gene-D8M40_03445;Dbxref=NCBI_GP:RUP89971.1;Name=RUP89971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03445;product=hypothetical protein;protein_id=RUP89971.1;transl_table=11 RBME01000002.1 Genbank gene 168466 168780 . - . ID=gene-D8M40_03450;Name=D8M40_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03450 RBME01000002.1 GeneMarkS+ CDS 168466 168780 . - 0 ID=cds-RUP89972.1;Parent=gene-D8M40_03450;Dbxref=NCBI_GP:RUP89972.1;Name=RUP89972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03450;product=hypothetical protein;protein_id=RUP89972.1;transl_table=11 RBME01000002.1 Genbank gene 168780 169874 . - . ID=gene-D8M40_03455;Name=D8M40_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03455 RBME01000002.1 Protein Homology CDS 168780 169874 . - 0 ID=cds-RUP89973.1;Parent=gene-D8M40_03455;Dbxref=NCBI_GP:RUP89973.1;Name=RUP89973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00144.22;locus_tag=D8M40_03455;product=class C beta-lactamase-related serine hydrolase;protein_id=RUP89973.1;transl_table=11 RBME01000002.1 Genbank gene 169885 170556 . - . ID=gene-D8M40_03460;Name=D8M40_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03460 RBME01000002.1 Protein Homology CDS 169885 170556 . - 0 ID=cds-RUP89974.1;Parent=gene-D8M40_03460;Dbxref=NCBI_GP:RUP89974.1;Name=RUP89974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323350.1;locus_tag=D8M40_03460;product=3'-5' exonuclease;protein_id=RUP89974.1;transl_table=11 RBME01000002.1 Genbank gene 170667 172745 . + . ID=gene-D8M40_03465;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=D8M40_03465 RBME01000002.1 Protein Homology CDS 170667 172745 . + 0 ID=cds-RUP89975.1;Parent=gene-D8M40_03465;Dbxref=NCBI_GP:RUP89975.1;Name=RUP89975.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769303.1;locus_tag=D8M40_03465;product=NAD-dependent DNA ligase LigA;protein_id=RUP89975.1;transl_table=11 RBME01000002.1 Genbank gene 172734 173396 . - . ID=gene-D8M40_03470;Name=D8M40_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03470 RBME01000002.1 Protein Homology CDS 172734 173396 . - 0 ID=cds-RUP89976.1;Parent=gene-D8M40_03470;Dbxref=NCBI_GP:RUP89976.1;Name=RUP89976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848727.1;locus_tag=D8M40_03470;product=amino acid-binding ACT domain protein;protein_id=RUP89976.1;transl_table=11 RBME01000002.1 Genbank gene 173593 173883 . + . ID=gene-D8M40_03475;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=D8M40_03475 RBME01000002.1 Protein Homology CDS 173593 173883 . + 0 ID=cds-RUP89977.1;Parent=gene-D8M40_03475;Dbxref=NCBI_GP:RUP89977.1;Name=RUP89977.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280231.1;locus_tag=D8M40_03475;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=RUP89977.1;transl_table=11 RBME01000002.1 Genbank gene 173944 175431 . + . ID=gene-D8M40_03480;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=D8M40_03480 RBME01000002.1 Protein Homology CDS 173944 175431 . + 0 ID=cds-RUP89978.1;Parent=gene-D8M40_03480;Dbxref=NCBI_GP:RUP89978.1;Name=RUP89978.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118647.1;locus_tag=D8M40_03480;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=RUP89978.1;transl_table=11 RBME01000002.1 Genbank gene 175441 175764 . - . ID=gene-D8M40_03485;Name=D8M40_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03485 RBME01000002.1 Protein Homology CDS 175441 175764 . - 0 ID=cds-RUP89979.1;Parent=gene-D8M40_03485;Dbxref=NCBI_GP:RUP89979.1;Name=RUP89979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532119.1;locus_tag=D8M40_03485;product=hypothetical protein;protein_id=RUP89979.1;transl_table=11 RBME01000002.1 Genbank gene 175947 177353 . + . ID=gene-D8M40_03490;Name=D8M40_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03490 RBME01000002.1 Protein Homology CDS 175947 177353 . + 0 ID=cds-RUP89980.1;Parent=gene-D8M40_03490;Dbxref=NCBI_GP:RUP89980.1;Name=RUP89980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120042.1;locus_tag=D8M40_03490;product=DHA2 family efflux MFS transporter permease subunit;protein_id=RUP89980.1;transl_table=11 RBME01000002.1 Genbank gene 177471 178502 . + . ID=gene-D8M40_03495;Name=D8M40_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03495 RBME01000002.1 Protein Homology CDS 177471 178502 . + 0 ID=cds-RUP89981.1;Parent=gene-D8M40_03495;Dbxref=NCBI_GP:RUP89981.1;Name=RUP89981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327686.1;locus_tag=D8M40_03495;product=ATP-dependent 6-phosphofructokinase;protein_id=RUP89981.1;transl_table=11 RBME01000002.1 Genbank gene 178594 180102 . + . ID=gene-D8M40_03500;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=D8M40_03500 RBME01000002.1 Protein Homology CDS 178594 180102 . + 0 ID=cds-RUP90042.1;Parent=gene-D8M40_03500;Dbxref=NCBI_GP:RUP90042.1;Name=RUP90042.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823331.1;locus_tag=D8M40_03500;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=RUP90042.1;transl_table=11 RBME01000002.1 Genbank gene 180208 181626 . + . ID=gene-D8M40_03505;Name=D8M40_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03505 RBME01000002.1 Protein Homology CDS 180208 181626 . + 0 ID=cds-RUP89982.1;Parent=gene-D8M40_03505;Dbxref=NCBI_GP:RUP89982.1;Name=RUP89982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848744.1;locus_tag=D8M40_03505;product=hypothetical protein;protein_id=RUP89982.1;transl_table=11 RBME01000002.1 Genbank gene 181783 182970 . - . ID=gene-D8M40_03510;Name=D8M40_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03510 RBME01000002.1 Protein Homology CDS 181783 182970 . - 0 ID=cds-RUP89983.1;Parent=gene-D8M40_03510;Dbxref=NCBI_GP:RUP89983.1;Name=RUP89983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280245.1;locus_tag=D8M40_03510;product=glutathione S-transferase family protein;protein_id=RUP89983.1;transl_table=11 RBME01000002.1 Genbank gene 183164 183886 . + . ID=gene-D8M40_03515;Name=D8M40_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03515 RBME01000002.1 Protein Homology CDS 183164 183886 . + 0 ID=cds-RUP90043.1;Parent=gene-D8M40_03515;Dbxref=NCBI_GP:RUP90043.1;Name=RUP90043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600488.1;locus_tag=D8M40_03515;product=HNH endonuclease;protein_id=RUP90043.1;transl_table=11 RBME01000002.1 Genbank gene 183956 185203 . + . ID=gene-D8M40_03520;Name=D8M40_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03520 RBME01000002.1 Protein Homology CDS 183956 185203 . + 0 ID=cds-RUP89984.1;Parent=gene-D8M40_03520;Dbxref=NCBI_GP:RUP89984.1;Name=RUP89984.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07681.10;locus_tag=D8M40_03520;product=DoxX family protein;protein_id=RUP89984.1;transl_table=11 RBME01000002.1 Genbank gene 185246 186484 . - . ID=gene-D8M40_03525;Name=D8M40_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03525 RBME01000002.1 Protein Homology CDS 185246 186484 . - 0 ID=cds-RUP89985.1;Parent=gene-D8M40_03525;Dbxref=NCBI_GP:RUP89985.1;Name=RUP89985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120049.1;locus_tag=D8M40_03525;product=DUF2029 domain-containing protein;protein_id=RUP89985.1;transl_table=11 RBME01000002.1 Genbank gene 186531 188372 . - . ID=gene-D8M40_03530;Name=D8M40_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03530 RBME01000002.1 Protein Homology CDS 186531 188372 . - 0 ID=cds-RUP89986.1;Parent=gene-D8M40_03530;Dbxref=NCBI_GP:RUP89986.1;Name=RUP89986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005523080.1;locus_tag=D8M40_03530;product=dihydroxy-acid dehydratase;protein_id=RUP89986.1;transl_table=11 RBME01000002.1 Genbank gene 188462 189046 . - . ID=gene-D8M40_03535;Name=D8M40_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03535 RBME01000002.1 Protein Homology CDS 188462 189046 . - 0 ID=cds-RUP89987.1;Parent=gene-D8M40_03535;Dbxref=NCBI_GP:RUP89987.1;Name=RUP89987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280251.1;locus_tag=D8M40_03535;product=PH domain-containing protein;protein_id=RUP89987.1;transl_table=11 RBME01000002.1 Genbank gene 189070 190308 . - . ID=gene-D8M40_03540;Name=D8M40_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03540 RBME01000002.1 Protein Homology CDS 189070 190308 . - 0 ID=cds-RUP89988.1;Parent=gene-D8M40_03540;Dbxref=NCBI_GP:RUP89988.1;Name=RUP89988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366909.1;locus_tag=D8M40_03540;product=mechanosensitive ion channel family protein;protein_id=RUP89988.1;transl_table=11 RBME01000002.1 Genbank gene 190610 192496 . + . ID=gene-D8M40_03545;Name=D8M40_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03545 RBME01000002.1 Protein Homology CDS 190610 192496 . + 0 ID=cds-RUP89989.1;Parent=gene-D8M40_03545;Dbxref=NCBI_GP:RUP89989.1;Name=RUP89989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295732.1;locus_tag=D8M40_03545;product=acetolactate synthase large subunit;protein_id=RUP89989.1;transl_table=11 RBME01000002.1 Genbank gene 192499 193014 . + . ID=gene-D8M40_03550;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=D8M40_03550 RBME01000002.1 Protein Homology CDS 192499 193014 . + 0 ID=cds-RUP89990.1;Parent=gene-D8M40_03550;Dbxref=NCBI_GP:RUP89990.1;Name=RUP89990.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186907.1;locus_tag=D8M40_03550;product=acetolactate synthase small subunit;protein_id=RUP89990.1;transl_table=11 RBME01000002.1 Genbank gene 193125 194138 . + . ID=gene-D8M40_03555;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=D8M40_03555 RBME01000002.1 Protein Homology CDS 193125 194138 . + 0 ID=cds-RUP89991.1;Parent=gene-D8M40_03555;Dbxref=NCBI_GP:RUP89991.1;Name=RUP89991.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400720.1;locus_tag=D8M40_03555;product=ketol-acid reductoisomerase;protein_id=RUP89991.1;transl_table=11 RBME01000002.1 Genbank gene 194179 195084 . + . ID=gene-D8M40_03560;Name=D8M40_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03560 RBME01000002.1 GeneMarkS+ CDS 194179 195084 . + 0 ID=cds-RUP89992.1;Parent=gene-D8M40_03560;Dbxref=NCBI_GP:RUP89992.1;Name=RUP89992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03560;product=hypothetical protein;protein_id=RUP89992.1;transl_table=11 RBME01000002.1 Genbank gene 195291 196871 . + . ID=gene-D8M40_03565;Name=D8M40_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03565 RBME01000002.1 Protein Homology CDS 195291 196871 . + 0 ID=cds-RUP89993.1;Parent=gene-D8M40_03565;Dbxref=NCBI_GP:RUP89993.1;Name=RUP89993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295726.1;locus_tag=D8M40_03565;product=phosphoglycerate dehydrogenase;protein_id=RUP89993.1;transl_table=11 RBME01000002.1 Genbank gene 196874 198091 . - . ID=gene-D8M40_03570;Name=D8M40_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03570 RBME01000002.1 Protein Homology CDS 196874 198091 . - 0 ID=cds-RUP89994.1;Parent=gene-D8M40_03570;Dbxref=NCBI_GP:RUP89994.1;Name=RUP89994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284110.1;locus_tag=D8M40_03570;product=pyridoxal phosphate-dependent aminotransferase family protein;protein_id=RUP89994.1;transl_table=11 RBME01000002.1 Genbank gene 198088 198813 . - . ID=gene-D8M40_03575;Name=D8M40_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03575 RBME01000002.1 Protein Homology CDS 198088 198813 . - 0 ID=cds-RUP89995.1;Parent=gene-D8M40_03575;Dbxref=NCBI_GP:RUP89995.1;Name=RUP89995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03744.11;locus_tag=D8M40_03575;product=6-carboxyhexanoate--CoA ligase;protein_id=RUP89995.1;transl_table=11 RBME01000002.1 Genbank gene 198922 199839 . + . ID=gene-D8M40_03580;Name=D8M40_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03580 RBME01000002.1 GeneMarkS+ CDS 198922 199839 . + 0 ID=cds-RUP89996.1;Parent=gene-D8M40_03580;Dbxref=NCBI_GP:RUP89996.1;Name=RUP89996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03580;product=hypothetical protein;protein_id=RUP89996.1;transl_table=11 RBME01000002.1 Genbank gene 199887 200906 . + . ID=gene-D8M40_03585;Name=D8M40_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03585 RBME01000002.1 Protein Homology CDS 199887 200906 . + 0 ID=cds-RUP89997.1;Parent=gene-D8M40_03585;Dbxref=NCBI_GP:RUP89997.1;Name=RUP89997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186893.1;locus_tag=D8M40_03585;product=3-isopropylmalate dehydrogenase;protein_id=RUP89997.1;transl_table=11 RBME01000002.1 Genbank gene 201049 202587 . + . ID=gene-D8M40_03590;Name=D8M40_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03590 RBME01000002.1 Protein Homology CDS 201049 202587 . + 0 ID=cds-RUP89998.1;Parent=gene-D8M40_03590;Dbxref=NCBI_GP:RUP89998.1;Name=RUP89998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295722.1;locus_tag=D8M40_03590;product=cell wall-binding repeat-containing protein;protein_id=RUP89998.1;transl_table=11 RBME01000002.1 Genbank gene 202638 204503 . + . ID=gene-D8M40_03595;Name=D8M40_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03595 RBME01000002.1 Protein Homology CDS 202638 204503 . + 0 ID=cds-RUP89999.1;Parent=gene-D8M40_03595;Dbxref=NCBI_GP:RUP89999.1;Name=RUP89999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400731.1;locus_tag=D8M40_03595;product=cyclic nucleotide-binding/CBS domain-containing protein;protein_id=RUP89999.1;transl_table=11 RBME01000002.1 Genbank gene 204652 205182 . + . ID=gene-D8M40_03600;Name=D8M40_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03600 RBME01000002.1 Protein Homology CDS 204652 205182 . + 0 ID=cds-RUP90044.1;Parent=gene-D8M40_03600;Dbxref=NCBI_GP:RUP90044.1;Name=RUP90044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400732.1;locus_tag=D8M40_03600;product=3'-5' exonuclease;protein_id=RUP90044.1;transl_table=11 RBME01000002.1 Genbank gene 205202 205996 . + . ID=gene-D8M40_03605;Name=D8M40_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03605 RBME01000002.1 Protein Homology CDS 205202 205996 . + 0 ID=cds-RUP90000.1;Parent=gene-D8M40_03605;Dbxref=NCBI_GP:RUP90000.1;Name=RUP90000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600512.1;locus_tag=D8M40_03605;product=FAA hydrolase family protein;protein_id=RUP90000.1;transl_table=11 RBME01000002.1 Genbank gene 206001 207098 . - . ID=gene-D8M40_03610;Name=D8M40_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03610 RBME01000002.1 Protein Homology CDS 206001 207098 . - 0 ID=cds-RUP90045.1;Parent=gene-D8M40_03610;Dbxref=NCBI_GP:RUP90045.1;Name=RUP90045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323318.1;locus_tag=D8M40_03610;product=isochorismate synthase;protein_id=RUP90045.1;transl_table=11 RBME01000002.1 Genbank gene 207157 208653 . + . ID=gene-D8M40_03615;Name=D8M40_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03615 RBME01000002.1 Protein Homology CDS 207157 208653 . + 0 ID=cds-RUP90046.1;Parent=gene-D8M40_03615;Dbxref=NCBI_GP:RUP90046.1;Name=RUP90046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651070.1;locus_tag=D8M40_03615;product=glutamate--tRNA ligase;protein_id=RUP90046.1;transl_table=11 RBME01000002.1 Genbank gene 208807 208878 . + . ID=gene-D8M40_03620;Name=D8M40_03620;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03620 RBME01000002.1 tRNAscan-SE tRNA 208807 208878 . + . ID=rna-D8M40_03620;Parent=gene-D8M40_03620;anticodon=(pos:208840..208842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03620;product=tRNA-Gln RBME01000002.1 tRNAscan-SE exon 208807 208878 . + . ID=exon-D8M40_03620-1;Parent=rna-D8M40_03620;anticodon=(pos:208840..208842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03620;product=tRNA-Gln RBME01000002.1 Genbank gene 208912 208987 . + . ID=gene-D8M40_03625;Name=D8M40_03625;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03625 RBME01000002.1 tRNAscan-SE tRNA 208912 208987 . + . ID=rna-D8M40_03625;Parent=gene-D8M40_03625;anticodon=(pos:208946..208948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03625;product=tRNA-Glu RBME01000002.1 tRNAscan-SE exon 208912 208987 . + . ID=exon-D8M40_03625-1;Parent=rna-D8M40_03625;anticodon=(pos:208946..208948);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03625;product=tRNA-Glu RBME01000002.1 Genbank gene 209055 209351 . + . ID=gene-D8M40_03630;Name=D8M40_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03630 RBME01000002.1 GeneMarkS+ CDS 209055 209351 . + 0 ID=cds-RUP90001.1;Parent=gene-D8M40_03630;Dbxref=NCBI_GP:RUP90001.1;Name=RUP90001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03630;product=hypothetical protein;protein_id=RUP90001.1;transl_table=11 RBME01000002.1 Genbank gene 209508 210347 . + . ID=gene-D8M40_03635;Name=D8M40_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03635 RBME01000002.1 Protein Homology CDS 209508 210347 . + 0 ID=cds-RUP90002.1;Parent=gene-D8M40_03635;Dbxref=NCBI_GP:RUP90002.1;Name=RUP90002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00657.20;locus_tag=D8M40_03635;product=hypothetical protein;protein_id=RUP90002.1;transl_table=11 RBME01000002.1 Genbank gene 210635 211552 . + . ID=gene-D8M40_03640;Name=D8M40_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03640 RBME01000002.1 Protein Homology CDS 210635 211552 . + 0 ID=cds-RUP90047.1;Parent=gene-D8M40_03640;Dbxref=NCBI_GP:RUP90047.1;Name=RUP90047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278132.1;locus_tag=D8M40_03640;product=DMT family transporter;protein_id=RUP90047.1;transl_table=11 RBME01000002.1 Genbank gene 211789 213162 . + . ID=gene-D8M40_03645;Name=D8M40_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03645 RBME01000002.1 Protein Homology CDS 211789 213162 . + 0 ID=cds-RUP90003.1;Parent=gene-D8M40_03645;Dbxref=NCBI_GP:RUP90003.1;Name=RUP90003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278141.1;locus_tag=D8M40_03645;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=RUP90003.1;transl_table=11 RBME01000002.1 Genbank gene 213259 214752 . - . ID=gene-D8M40_03650;Name=D8M40_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03650 RBME01000002.1 Protein Homology CDS 213259 214752 . - 0 ID=cds-RUP90048.1;Parent=gene-D8M40_03650;Dbxref=NCBI_GP:RUP90048.1;Name=RUP90048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854614.1;locus_tag=D8M40_03650;product=deoxyribodipyrimidine photo-lyase;protein_id=RUP90048.1;transl_table=11 RBME01000002.1 Genbank gene 214994 215692 . - . ID=gene-D8M40_03655;Name=D8M40_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03655 RBME01000002.1 Protein Homology CDS 214994 215692 . - 0 ID=cds-RUP90004.1;Parent=gene-D8M40_03655;Dbxref=NCBI_GP:RUP90004.1;Name=RUP90004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282586.1;locus_tag=D8M40_03655;product=IclR family transcriptional regulator;protein_id=RUP90004.1;transl_table=11 RBME01000002.1 Genbank gene 215722 217155 . + . ID=gene-D8M40_03660;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=D8M40_03660 RBME01000002.1 Protein Homology CDS 215722 217155 . + 0 ID=cds-RUP90005.1;Parent=gene-D8M40_03660;Dbxref=NCBI_GP:RUP90005.1;Name=RUP90005.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600536.1;locus_tag=D8M40_03660;product=3-isopropylmalate dehydratase large subunit;protein_id=RUP90005.1;transl_table=11 RBME01000002.1 Genbank gene 217185 217772 . + . ID=gene-D8M40_03665;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=D8M40_03665 RBME01000002.1 Protein Homology CDS 217185 217772 . + 0 ID=cds-RUP90006.1;Parent=gene-D8M40_03665;Dbxref=NCBI_GP:RUP90006.1;Name=RUP90006.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296962.1;locus_tag=D8M40_03665;product=3-isopropylmalate dehydratase small subunit;protein_id=RUP90006.1;transl_table=11 RBME01000002.1 Genbank gene 217773 218768 . - . ID=gene-D8M40_03670;Name=D8M40_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03670 RBME01000002.1 Protein Homology CDS 217773 218768 . - 0 ID=cds-RUP90007.1;Parent=gene-D8M40_03670;Dbxref=NCBI_GP:RUP90007.1;Name=RUP90007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186853.1;locus_tag=D8M40_03670;product=NUDIX hydrolase;protein_id=RUP90007.1;transl_table=11 RBME01000002.1 Genbank gene 218859 219851 . + . ID=gene-D8M40_03675;Name=D8M40_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03675 RBME01000002.1 Protein Homology CDS 218859 219851 . + 0 ID=cds-RUP90008.1;Parent=gene-D8M40_03675;Dbxref=NCBI_GP:RUP90008.1;Name=RUP90008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005290376.1;locus_tag=D8M40_03675;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=RUP90008.1;transl_table=11 RBME01000002.1 Genbank gene 219901 220962 . + . ID=gene-D8M40_03680;Name=D8M40_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03680 RBME01000002.1 Protein Homology CDS 219901 220962 . + 0 ID=cds-RUP90009.1;Parent=gene-D8M40_03680;Dbxref=NCBI_GP:RUP90009.1;Name=RUP90009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323299.1;locus_tag=D8M40_03680;product=D-alanine--D-alanine ligase A;protein_id=RUP90009.1;transl_table=11 RBME01000002.1 Genbank gene 220988 222154 . - . ID=gene-D8M40_03685;Name=D8M40_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03685 RBME01000002.1 Protein Homology CDS 220988 222154 . - 0 ID=cds-RUP90010.1;Parent=gene-D8M40_03685;Dbxref=NCBI_GP:RUP90010.1;Name=RUP90010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769396.1;locus_tag=D8M40_03685;product=DUF3515 domain-containing protein;protein_id=RUP90010.1;transl_table=11 RBME01000002.1 Genbank gene 222196 223227 . + . ID=gene-D8M40_03690;Name=D8M40_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03690 RBME01000002.1 Protein Homology CDS 222196 223227 . + 0 ID=cds-RUP90011.1;Parent=gene-D8M40_03690;Dbxref=NCBI_GP:RUP90011.1;Name=RUP90011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848890.1;locus_tag=D8M40_03690;product=thiamine-phosphate kinase;protein_id=RUP90011.1;transl_table=11 RBME01000002.1 Genbank gene 223224 223952 . + . ID=gene-D8M40_03695;Name=D8M40_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03695 RBME01000002.1 Protein Homology CDS 223224 223952 . + 0 ID=cds-RUP90012.1;Parent=gene-D8M40_03695;Dbxref=NCBI_GP:RUP90012.1;Name=RUP90012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022507.1;locus_tag=D8M40_03695;product=uracil-DNA glycosylase;protein_id=RUP90012.1;transl_table=11 RBME01000002.1 Genbank gene 223972 225681 . + . ID=gene-D8M40_03700;Name=D8M40_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03700 RBME01000002.1 Protein Homology CDS 223972 225681 . + 0 ID=cds-RUP90013.1;Parent=gene-D8M40_03700;Dbxref=NCBI_GP:RUP90013.1;Name=RUP90013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02734.15%2CHMM:PF13684.4;locus_tag=D8M40_03700;product=DAK2 domain-containing protein;protein_id=RUP90013.1;transl_table=11 RBME01000002.1 Genbank gene 225683 227923 . + . ID=gene-D8M40_03705;Name=D8M40_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03705 RBME01000002.1 Protein Homology CDS 225683 227923 . + 0 ID=cds-RUP90014.1;Parent=gene-D8M40_03705;Dbxref=NCBI_GP:RUP90014.1;Name=RUP90014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04851.13%2CHMM:PF17191.2;locus_tag=D8M40_03705;product=ATP-dependent DNA helicase RecG;protein_id=RUP90014.1;transl_table=11 RBME01000002.1 Genbank gene 227965 228552 . + . ID=gene-D8M40_03710;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=D8M40_03710 RBME01000002.1 Protein Homology CDS 227965 228552 . + 0 ID=cds-RUP90015.1;Parent=gene-D8M40_03710;Dbxref=NCBI_GP:RUP90015.1;Name=RUP90015.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062027.1;locus_tag=D8M40_03710;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=RUP90015.1;transl_table=11 RBME01000002.1 Genbank gene 228651 229148 . + . ID=gene-D8M40_03715;Name=D8M40_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03715 RBME01000002.1 Protein Homology CDS 228651 229148 . + 0 ID=cds-RUP90016.1;Parent=gene-D8M40_03715;Dbxref=NCBI_GP:RUP90016.1;Name=RUP90016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323291.1;locus_tag=D8M40_03715;product=pantetheine-phosphate adenylyltransferase;protein_id=RUP90016.1;transl_table=11 RBME01000002.1 Genbank gene 229145 229975 . - . ID=gene-D8M40_03720;Name=D8M40_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03720 RBME01000002.1 Protein Homology CDS 229145 229975 . - 0 ID=cds-RUP90017.1;Parent=gene-D8M40_03720;Dbxref=NCBI_GP:RUP90017.1;Name=RUP90017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823078.1;locus_tag=D8M40_03720;product=DUF368 domain-containing protein;protein_id=RUP90017.1;transl_table=11 RBME01000002.1 Genbank gene 230131 230207 . + . ID=gene-D8M40_03725;Name=D8M40_03725;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03725 RBME01000002.1 tRNAscan-SE tRNA 230131 230207 . + . ID=rna-D8M40_03725;Parent=gene-D8M40_03725;anticodon=(pos:230165..230167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03725;product=tRNA-Leu RBME01000002.1 tRNAscan-SE exon 230131 230207 . + . ID=exon-D8M40_03725-1;Parent=rna-D8M40_03725;anticodon=(pos:230165..230167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03725;product=tRNA-Leu RBME01000002.1 Genbank gene 230600 230896 . + . ID=gene-D8M40_03730;Name=D8M40_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03730 RBME01000002.1 GeneMarkS+ CDS 230600 230896 . + 0 ID=cds-RUP90018.1;Parent=gene-D8M40_03730;Dbxref=NCBI_GP:RUP90018.1;Name=RUP90018.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03730;product=hypothetical protein;protein_id=RUP90018.1;transl_table=11 RBME01000002.1 Genbank gene 231392 231754 . + . ID=gene-D8M40_03735;Name=D8M40_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03735 RBME01000002.1 Protein Homology CDS 231392 231754 . + 0 ID=cds-RUP90019.1;Parent=gene-D8M40_03735;Dbxref=NCBI_GP:RUP90019.1;Name=RUP90019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120096.1;locus_tag=D8M40_03735;product=hypothetical protein;protein_id=RUP90019.1;transl_table=11 RBME01000002.1 Genbank gene 231928 232470 . + . ID=gene-D8M40_03740;Name=D8M40_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03740 RBME01000002.1 GeneMarkS+ CDS 231928 232470 . + 0 ID=cds-RUP90020.1;Parent=gene-D8M40_03740;Dbxref=NCBI_GP:RUP90020.1;Name=RUP90020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03740;product=hypothetical protein;protein_id=RUP90020.1;transl_table=11 RBME01000002.1 Genbank gene 232503 232871 . + . ID=gene-D8M40_03745;Name=D8M40_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03745 RBME01000002.1 GeneMarkS+ CDS 232503 232871 . + 0 ID=cds-RUP90021.1;Parent=gene-D8M40_03745;Dbxref=NCBI_GP:RUP90021.1;Name=RUP90021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03745;product=hypothetical protein;protein_id=RUP90021.1;transl_table=11 RBME01000002.1 Genbank gene 232846 233136 . + . ID=gene-D8M40_03750;Name=D8M40_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03750 RBME01000002.1 GeneMarkS+ CDS 232846 233136 . + 0 ID=cds-RUP90022.1;Parent=gene-D8M40_03750;Dbxref=NCBI_GP:RUP90022.1;Name=RUP90022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03750;product=hypothetical protein;protein_id=RUP90022.1;transl_table=11 RBME01000002.1 Genbank gene 233305 233661 . + . ID=gene-D8M40_03755;Name=D8M40_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03755 RBME01000002.1 GeneMarkS+ CDS 233305 233661 . + 0 ID=cds-RUP90023.1;Parent=gene-D8M40_03755;Dbxref=NCBI_GP:RUP90023.1;Name=RUP90023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03755;product=hypothetical protein;protein_id=RUP90023.1;transl_table=11 ##sequence-region RBME01000030.1 1 1576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000030.1 Genbank region 1 1576 . + . ID=RBME01000030.1:1..1576;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000030.1 Genbank pseudogene 48 887 . + . ID=gene-D8M40_11300;Name=D8M40_11300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11300;pseudo=true RBME01000030.1 Protein Homology CDS 48 887 . + 0 ID=cds-D8M40_11300;Parent=gene-D8M40_11300;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010211316.1;locus_tag=D8M40_11300;product=NAD-dependent protein deacetylase;pseudo=true;transl_table=11 ##sequence-region RBME01000031.1 1 1508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000031.1 Genbank region 1 1508 . + . ID=RBME01000031.1:1..1508;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000031.1 Genbank gene 62 616 . + . ID=gene-D8M40_11305;Name=D8M40_11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11305 RBME01000031.1 Protein Homology CDS 62 616 . + 0 ID=cds-RUP86906.1;Parent=gene-D8M40_11305;Dbxref=NCBI_GP:RUP86906.1;Name=RUP86906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016977263.1;locus_tag=D8M40_11305;product=hypothetical protein;protein_id=RUP86906.1;transl_table=11 RBME01000031.1 Genbank gene 690 1067 . - . ID=gene-D8M40_11310;Name=D8M40_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11310 RBME01000031.1 Protein Homology CDS 690 1067 . - 0 ID=cds-RUP86907.1;Parent=gene-D8M40_11310;Dbxref=NCBI_GP:RUP86907.1;Name=RUP86907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014720512.1;locus_tag=D8M40_11310;product=hypothetical protein;protein_id=RUP86907.1;transl_table=11 RBME01000031.1 Genbank gene 1221 1508 . + . ID=gene-D8M40_11315;Name=D8M40_11315;end_range=1508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11315;partial=true RBME01000031.1 Protein Homology CDS 1221 1508 . + 0 ID=cds-RUP86908.1;Parent=gene-D8M40_11315;Dbxref=NCBI_GP:RUP86908.1;Name=RUP86908.1;end_range=1508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003096653.1;locus_tag=D8M40_11315;partial=true;product=response regulator;protein_id=RUP86908.1;transl_table=11 ##sequence-region RBME01000032.1 1 1497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000032.1 Genbank region 1 1497 . + . ID=RBME01000032.1:1..1497;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000032.1 Genbank gene 8 1411 . - . ID=gene-D8M40_11320;Name=D8M40_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11320 RBME01000032.1 Protein Homology CDS 8 1411 . - 0 ID=cds-RUP86904.1;Parent=gene-D8M40_11320;Dbxref=NCBI_GP:RUP86904.1;Name=RUP86904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011562043.1;locus_tag=D8M40_11320;product=IS30 family transposase;protein_id=RUP86904.1;transl_table=11 ##sequence-region RBME01000033.1 1 1415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000033.1 Genbank region 1 1415 . + . ID=RBME01000033.1:1..1415;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000033.1 Genbank gene 1 1415 . - . ID=gene-D8M40_11325;Name=D8M40_11325;end_range=1415,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11325;partial=true;start_range=.,1 RBME01000033.1 Protein Homology CDS 1 1415 . - 0 ID=cds-RUP86901.1;Parent=gene-D8M40_11325;Dbxref=NCBI_GP:RUP86901.1;Name=RUP86901.1;end_range=1415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014716367.1;locus_tag=D8M40_11325;partial=true;product=type I secretion protein;protein_id=RUP86901.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000034.1 1 1440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000034.1 Genbank region 1 1440 . + . ID=RBME01000034.1:1..1440;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000034.1 Genbank pseudogene 37 1252 . - . ID=gene-D8M40_11330;Name=D8M40_11330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11330;pseudo=true RBME01000034.1 Protein Homology CDS 37 1252 . - 0 ID=cds-D8M40_11330;Parent=gene-D8M40_11330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M40_11330;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000035.1 1 1435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000035.1 Genbank region 1 1435 . + . ID=RBME01000035.1:1..1435;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000035.1 Genbank gene 75 1274 . - . ID=gene-D8M40_11335;Name=D8M40_11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11335 RBME01000035.1 Protein Homology CDS 75 1274 . - 0 ID=cds-RUP86897.1;Parent=gene-D8M40_11335;Dbxref=NCBI_GP:RUP86897.1;Name=RUP86897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714772.1;locus_tag=D8M40_11335;product=IS1249 family transposase;protein_id=RUP86897.1;transl_table=11 ##sequence-region RBME01000036.1 1 1387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000036.1 Genbank region 1 1387 . + . ID=RBME01000036.1:1..1387;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000036.1 Genbank gene 1 82 . + . ID=gene-D8M40_11340;Name=D8M40_11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11340;partial=true;start_range=.,1 RBME01000036.1 Protein Homology CDS 1 82 . + 1 ID=cds-RUP86894.1;Parent=gene-D8M40_11340;Dbxref=NCBI_GP:RUP86894.1;Name=RUP86894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017736403.1;locus_tag=D8M40_11340;partial=true;product=vanillate O-demethylase oxidoreductase VanB;protein_id=RUP86894.1;start_range=.,1;transl_table=11 RBME01000036.1 Genbank gene 201 1387 . + . ID=gene-D8M40_11345;Name=D8M40_11345;end_range=1387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11345;partial=true RBME01000036.1 Protein Homology CDS 201 1387 . + 0 ID=cds-RUP86895.1;Parent=gene-D8M40_11345;Dbxref=NCBI_GP:RUP86895.1;Name=RUP86895.1;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C;end_range=1387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_792430.1;locus_tag=D8M40_11345;partial=true;product=DNA polymerase II;protein_id=RUP86895.1;transl_table=11 ##sequence-region RBME01000037.1 1 1385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000037.1 Genbank region 1 1385 . + . ID=RBME01000037.1:1..1385;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000037.1 Genbank gene 1 328 . - . ID=gene-D8M40_11350;Name=D8M40_11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11350;partial=true;start_range=.,1 RBME01000037.1 Protein Homology CDS 1 328 . - 0 ID=cds-RUP86416.1;Parent=gene-D8M40_11350;Dbxref=NCBI_GP:RUP86416.1;Name=RUP86416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017138550.1;locus_tag=D8M40_11350;partial=true;product=hypothetical protein;protein_id=RUP86416.1;start_range=.,1;transl_table=11 RBME01000037.1 Genbank gene 318 1001 . - . ID=gene-D8M40_11355;Name=D8M40_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11355 RBME01000037.1 Protein Homology CDS 318 1001 . - 0 ID=cds-RUP86417.1;Parent=gene-D8M40_11355;Dbxref=NCBI_GP:RUP86417.1;Name=RUP86417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003187938.1;locus_tag=D8M40_11355;product=outer membrane lipoprotein carrier protein LolA;protein_id=RUP86417.1;transl_table=11 RBME01000037.1 Genbank pseudogene 998 1385 . - . ID=gene-D8M40_11360;Name=D8M40_11360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11360;pseudo=true RBME01000037.1 Protein Homology CDS 998 1385 . - 1 ID=cds-D8M40_11360;Parent=gene-D8M40_11360;Note=internal stop%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012721833.1;locus_tag=D8M40_11360;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 ##sequence-region RBME01000038.1 1 1376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000038.1 Genbank region 1 1376 . + . ID=RBME01000038.1:1..1376;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000038.1 Genbank gene 30 965 . - . ID=gene-D8M40_11365;Name=D8M40_11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11365 RBME01000038.1 Protein Homology CDS 30 965 . - 0 ID=cds-RUP86412.1;Parent=gene-D8M40_11365;Dbxref=NCBI_GP:RUP86412.1;Name=RUP86412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003207290.1;locus_tag=D8M40_11365;product=LysR family transcriptional regulator;protein_id=RUP86412.1;transl_table=11 RBME01000038.1 Genbank gene 987 1376 . - . ID=gene-D8M40_11370;Name=D8M40_11370;end_range=1376,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11370;partial=true RBME01000038.1 Protein Homology CDS 987 1376 . - 0 ID=cds-RUP86413.1;Parent=gene-D8M40_11370;Dbxref=NCBI_GP:RUP86413.1;Name=RUP86413.1;Note=involved in the transport of C4-dicarboxylates across the membrane;end_range=1376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003207293.1;locus_tag=D8M40_11370;partial=true;product=C4-dicarboxylate transporter DctA;protein_id=RUP86413.1;transl_table=11 ##sequence-region RBME01000039.1 1 1355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000039.1 Genbank region 1 1355 . + . ID=RBME01000039.1:1..1355;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000039.1 Genbank gene 1 394 . - . ID=gene-D8M40_11375;Name=D8M40_11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11375;partial=true;start_range=.,1 RBME01000039.1 Protein Homology CDS 1 394 . - 0 ID=cds-RUP86410.1;Parent=gene-D8M40_11375;Dbxref=NCBI_GP:RUP86410.1;Name=RUP86410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371231.1;locus_tag=D8M40_11375;partial=true;product=L-arabinose ABC transporter permease AraH;protein_id=RUP86410.1;start_range=.,1;transl_table=11 RBME01000039.1 Genbank gene 412 1355 . - . ID=gene-D8M40_11380;Name=D8M40_11380;end_range=1355,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11380;partial=true RBME01000039.1 Protein Homology CDS 412 1355 . - 2 ID=cds-RUP86409.1;Parent=gene-D8M40_11380;Dbxref=NCBI_GP:RUP86409.1;Name=RUP86409.1;end_range=1355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973654.1;locus_tag=D8M40_11380;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP86409.1;transl_table=11 ##sequence-region RBME01000003.1 1 172501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000003.1 Genbank region 1 172501 . + . ID=RBME01000003.1:1..172501;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000003.1 Genbank pseudogene 125 756 . - . ID=gene-D8M40_03760;Name=D8M40_03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_03760;pseudo=true RBME01000003.1 Protein Homology CDS 125 756 . - 0 ID=cds-D8M40_03760;Parent=gene-D8M40_03760;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558196.1;locus_tag=D8M40_03760;product=IS3 family transposase;pseudo=true;transl_table=11 RBME01000003.1 Genbank gene 1047 1982 . - . ID=gene-D8M40_03765;Name=D8M40_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03765 RBME01000003.1 Protein Homology CDS 1047 1982 . - 0 ID=cds-RUP89494.1;Parent=gene-D8M40_03765;Dbxref=NCBI_GP:RUP89494.1;Name=RUP89494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061481.1;locus_tag=D8M40_03765;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=RUP89494.1;transl_table=11 RBME01000003.1 Genbank gene 1945 3195 . - . ID=gene-D8M40_03770;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=D8M40_03770 RBME01000003.1 Protein Homology CDS 1945 3195 . - 0 ID=cds-RUP89495.1;Parent=gene-D8M40_03770;Dbxref=NCBI_GP:RUP89495.1;Name=RUP89495.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280775.1;locus_tag=D8M40_03770;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=RUP89495.1;transl_table=11 RBME01000003.1 Genbank gene 3201 5678 . - . ID=gene-D8M40_03775;Name=D8M40_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03775 RBME01000003.1 Protein Homology CDS 3201 5678 . - 0 ID=cds-RUP89496.1;Parent=gene-D8M40_03775;Dbxref=NCBI_GP:RUP89496.1;Name=RUP89496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120165.1;locus_tag=D8M40_03775;product=MMPL family transporter;protein_id=RUP89496.1;transl_table=11 RBME01000003.1 Genbank gene 5782 5872 . - . ID=gene-D8M40_03780;Name=D8M40_03780;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03780 RBME01000003.1 tRNAscan-SE tRNA 5782 5872 . - . ID=rna-D8M40_03780;Parent=gene-D8M40_03780;anticodon=(pos:complement(5836..5838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03780;product=tRNA-Ser RBME01000003.1 tRNAscan-SE exon 5782 5872 . - . ID=exon-D8M40_03780-1;Parent=rna-D8M40_03780;anticodon=(pos:complement(5836..5838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03780;product=tRNA-Ser RBME01000003.1 Genbank gene 6253 6477 . - . ID=gene-D8M40_03785;Name=D8M40_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03785 RBME01000003.1 Protein Homology CDS 6253 6477 . - 0 ID=cds-RUP89497.1;Parent=gene-D8M40_03785;Dbxref=NCBI_GP:RUP89497.1;Name=RUP89497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016421846.1;locus_tag=D8M40_03785;product=CsbD family protein;protein_id=RUP89497.1;transl_table=11 RBME01000003.1 Genbank gene 6535 7113 . - . ID=gene-D8M40_03790;Name=D8M40_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03790 RBME01000003.1 Protein Homology CDS 6535 7113 . - 0 ID=cds-RUP89498.1;Parent=gene-D8M40_03790;Dbxref=NCBI_GP:RUP89498.1;Name=RUP89498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120168.1;locus_tag=D8M40_03790;product=nucleoside deaminase;protein_id=RUP89498.1;transl_table=11 RBME01000003.1 Genbank gene 7126 7620 . - . ID=gene-D8M40_03795;Name=D8M40_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03795 RBME01000003.1 Protein Homology CDS 7126 7620 . - 0 ID=cds-RUP89499.1;Parent=gene-D8M40_03795;Dbxref=NCBI_GP:RUP89499.1;Name=RUP89499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120169.1;locus_tag=D8M40_03795;product=tRNA adenosine deaminase;protein_id=RUP89499.1;transl_table=11 RBME01000003.1 Genbank gene 7660 8688 . + . ID=gene-D8M40_03800;Name=D8M40_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03800 RBME01000003.1 Protein Homology CDS 7660 8688 . + 0 ID=cds-RUP89500.1;Parent=gene-D8M40_03800;Dbxref=NCBI_GP:RUP89500.1;Name=RUP89500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188399.1;locus_tag=D8M40_03800;product=prephenate dehydrogenase;protein_id=RUP89500.1;transl_table=11 RBME01000003.1 Genbank gene 9073 11187 . - . ID=gene-D8M40_03805;Name=D8M40_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03805 RBME01000003.1 Protein Homology CDS 9073 11187 . - 0 ID=cds-RUP89501.1;Parent=gene-D8M40_03805;Dbxref=NCBI_GP:RUP89501.1;Name=RUP89501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120171.1;locus_tag=D8M40_03805;product=acyl-CoA oxidase;protein_id=RUP89501.1;transl_table=11 RBME01000003.1 Genbank gene 11253 12548 . - . ID=gene-D8M40_03810;Name=D8M40_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03810 RBME01000003.1 Protein Homology CDS 11253 12548 . - 0 ID=cds-RUP89502.1;Parent=gene-D8M40_03810;Dbxref=NCBI_GP:RUP89502.1;Name=RUP89502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120172.1;locus_tag=D8M40_03810;product=acetyl-CoA C-acetyltransferase;protein_id=RUP89502.1;transl_table=11 RBME01000003.1 Genbank gene 12709 14025 . + . ID=gene-D8M40_03815;Name=D8M40_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03815 RBME01000003.1 Protein Homology CDS 12709 14025 . + 0 ID=cds-RUP89503.1;Parent=gene-D8M40_03815;Dbxref=NCBI_GP:RUP89503.1;Name=RUP89503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120173.1;locus_tag=D8M40_03815;product=3-oxoacyl-ACP reductase;protein_id=RUP89503.1;transl_table=11 RBME01000003.1 Genbank gene 14058 14993 . + . ID=gene-D8M40_03820;Name=D8M40_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03820 RBME01000003.1 Protein Homology CDS 14058 14993 . + 0 ID=cds-RUP89504.1;Parent=gene-D8M40_03820;Dbxref=NCBI_GP:RUP89504.1;Name=RUP89504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120174.1;locus_tag=D8M40_03820;product=hypothetical protein;protein_id=RUP89504.1;transl_table=11 RBME01000003.1 Genbank gene 15148 16347 . + . ID=gene-D8M40_03825;Name=D8M40_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03825 RBME01000003.1 Protein Homology CDS 15148 16347 . + 0 ID=cds-RUP89505.1;Parent=gene-D8M40_03825;Dbxref=NCBI_GP:RUP89505.1;Name=RUP89505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120175.1;locus_tag=D8M40_03825;product=aminopeptidase P family protein;protein_id=RUP89505.1;transl_table=11 RBME01000003.1 Genbank gene 16439 17755 . + . ID=gene-D8M40_03830;Name=D8M40_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03830 RBME01000003.1 Protein Homology CDS 16439 17755 . + 0 ID=cds-RUP89506.1;Parent=gene-D8M40_03830;Dbxref=NCBI_GP:RUP89506.1;Name=RUP89506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10011.7;locus_tag=D8M40_03830;product=DUF2254 domain-containing protein;protein_id=RUP89506.1;transl_table=11 RBME01000003.1 Genbank gene 17934 18425 . + . ID=gene-D8M40_03835;Name=D8M40_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03835 RBME01000003.1 GeneMarkS+ CDS 17934 18425 . + 0 ID=cds-RUP89507.1;Parent=gene-D8M40_03835;Dbxref=NCBI_GP:RUP89507.1;Name=RUP89507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03835;product=XRE family transcriptional regulator;protein_id=RUP89507.1;transl_table=11 RBME01000003.1 Genbank gene 18781 19245 . - . ID=gene-D8M40_03840;Name=D8M40_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03840 RBME01000003.1 Protein Homology CDS 18781 19245 . - 0 ID=cds-RUP89508.1;Parent=gene-D8M40_03840;Dbxref=NCBI_GP:RUP89508.1;Name=RUP89508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120178.1;locus_tag=D8M40_03840;product=hypothetical protein;protein_id=RUP89508.1;transl_table=11 RBME01000003.1 Genbank gene 19245 20069 . - . ID=gene-D8M40_03845;Name=D8M40_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03845 RBME01000003.1 Protein Homology CDS 19245 20069 . - 0 ID=cds-RUP89509.1;Parent=gene-D8M40_03845;Dbxref=NCBI_GP:RUP89509.1;Name=RUP89509.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06114.11;locus_tag=D8M40_03845;product=ImmA/IrrE family metallo-endopeptidase;protein_id=RUP89509.1;transl_table=11 RBME01000003.1 Genbank gene 20066 20422 . - . ID=gene-D8M40_03850;Name=D8M40_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03850 RBME01000003.1 Protein Homology CDS 20066 20422 . - 0 ID=cds-RUP89510.1;Parent=gene-D8M40_03850;Dbxref=NCBI_GP:RUP89510.1;Name=RUP89510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120180.1;locus_tag=D8M40_03850;product=XRE family transcriptional regulator;protein_id=RUP89510.1;transl_table=11 RBME01000003.1 Genbank pseudogene 20653 23509 . + . ID=gene-D8M40_03855;Name=D8M40_03855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_03855;pseudo=true RBME01000003.1 Protein Homology CDS 20653 23509 . + 0 ID=cds-D8M40_03855;Parent=gene-D8M40_03855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120181.1;locus_tag=D8M40_03855;product=SAM-dependent DNA methyltransferase;pseudo=true;transl_table=11 RBME01000003.1 Genbank gene 23626 25182 . - . ID=gene-D8M40_03860;Name=D8M40_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03860 RBME01000003.1 Protein Homology CDS 23626 25182 . - 0 ID=cds-RUP89619.1;Parent=gene-D8M40_03860;Dbxref=NCBI_GP:RUP89619.1;Name=RUP89619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010647783.1;locus_tag=D8M40_03860;product=AbgT family transporter;protein_id=RUP89619.1;transl_table=11 RBME01000003.1 Genbank gene 25166 26458 . - . ID=gene-D8M40_03865;Name=D8M40_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03865 RBME01000003.1 Protein Homology CDS 25166 26458 . - 0 ID=cds-RUP89511.1;Parent=gene-D8M40_03865;Dbxref=NCBI_GP:RUP89511.1;Name=RUP89511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01891;locus_tag=D8M40_03865;product=amidohydrolase;protein_id=RUP89511.1;transl_table=11 RBME01000003.1 Genbank gene 26458 27762 . - . ID=gene-D8M40_03870;Name=D8M40_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03870 RBME01000003.1 Protein Homology CDS 26458 27762 . - 0 ID=cds-RUP89512.1;Parent=gene-D8M40_03870;Dbxref=NCBI_GP:RUP89512.1;Name=RUP89512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009079889.1;locus_tag=D8M40_03870;product=amidohydrolase family protein;protein_id=RUP89512.1;transl_table=11 RBME01000003.1 Genbank gene 28052 29479 . + . ID=gene-D8M40_03875;Name=D8M40_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03875 RBME01000003.1 Protein Homology CDS 28052 29479 . + 0 ID=cds-RUP89513.1;Parent=gene-D8M40_03875;Dbxref=NCBI_GP:RUP89513.1;Name=RUP89513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019618714.1;locus_tag=D8M40_03875;product=APC family permease;protein_id=RUP89513.1;transl_table=11 RBME01000003.1 Genbank gene 29488 30783 . + . ID=gene-D8M40_03880;Name=D8M40_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03880 RBME01000003.1 Protein Homology CDS 29488 30783 . + 0 ID=cds-RUP89514.1;Parent=gene-D8M40_03880;Dbxref=NCBI_GP:RUP89514.1;Name=RUP89514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324334.1;locus_tag=D8M40_03880;product=glutamine synthetase;protein_id=RUP89514.1;transl_table=11 RBME01000003.1 Genbank gene 30812 31948 . + . ID=gene-D8M40_03885;Name=D8M40_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03885 RBME01000003.1 Protein Homology CDS 30812 31948 . + 0 ID=cds-RUP89620.1;Parent=gene-D8M40_03885;Dbxref=NCBI_GP:RUP89620.1;Name=RUP89620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005268583.1;locus_tag=D8M40_03885;product=amidohydrolase;protein_id=RUP89620.1;transl_table=11 RBME01000003.1 Genbank gene 31983 33176 . + . ID=gene-D8M40_03890;Name=D8M40_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03890 RBME01000003.1 Protein Homology CDS 31983 33176 . + 0 ID=cds-RUP89515.1;Parent=gene-D8M40_03890;Dbxref=NCBI_GP:RUP89515.1;Name=RUP89515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01891;locus_tag=D8M40_03890;product=amidohydrolase;protein_id=RUP89515.1;transl_table=11 RBME01000003.1 Genbank gene 33362 34078 . - . ID=gene-D8M40_03895;Name=D8M40_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03895 RBME01000003.1 Protein Homology CDS 33362 34078 . - 0 ID=cds-RUP89516.1;Parent=gene-D8M40_03895;Dbxref=NCBI_GP:RUP89516.1;Name=RUP89516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01427.15;locus_tag=D8M40_03895;product=hypothetical protein;protein_id=RUP89516.1;transl_table=11 RBME01000003.1 Genbank gene 34047 35477 . - . ID=gene-D8M40_03900;Name=D8M40_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03900 RBME01000003.1 Protein Homology CDS 34047 35477 . - 0 ID=cds-RUP89517.1;Parent=gene-D8M40_03900;Dbxref=NCBI_GP:RUP89517.1;Name=RUP89517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016666637.1;locus_tag=D8M40_03900;product=APC family permease;protein_id=RUP89517.1;transl_table=11 RBME01000003.1 Genbank gene 35749 36141 . - . ID=gene-D8M40_03905;Name=D8M40_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03905 RBME01000003.1 Protein Homology CDS 35749 36141 . - 0 ID=cds-RUP89518.1;Parent=gene-D8M40_03905;Dbxref=NCBI_GP:RUP89518.1;Name=RUP89518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328133.1;locus_tag=D8M40_03905;product=hypothetical protein;protein_id=RUP89518.1;transl_table=11 RBME01000003.1 Genbank gene 36360 38783 . + . ID=gene-D8M40_03910;Name=D8M40_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03910 RBME01000003.1 Protein Homology CDS 36360 38783 . + 0 ID=cds-RUP89519.1;Parent=gene-D8M40_03910;Dbxref=NCBI_GP:RUP89519.1;Name=RUP89519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120190.1;locus_tag=D8M40_03910;product=DUF262 domain-containing protein;protein_id=RUP89519.1;transl_table=11 RBME01000003.1 Genbank gene 38886 39566 . - . ID=gene-D8M40_03915;Name=D8M40_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03915 RBME01000003.1 Protein Homology CDS 38886 39566 . - 0 ID=cds-RUP89520.1;Parent=gene-D8M40_03915;Dbxref=NCBI_GP:RUP89520.1;Name=RUP89520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822088.1;locus_tag=D8M40_03915;product=hypothetical protein;protein_id=RUP89520.1;transl_table=11 RBME01000003.1 Genbank gene 39836 40141 . - . ID=gene-D8M40_03920;Name=D8M40_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03920 RBME01000003.1 GeneMarkS+ CDS 39836 40141 . - 0 ID=cds-RUP89521.1;Parent=gene-D8M40_03920;Dbxref=NCBI_GP:RUP89521.1;Name=RUP89521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03920;product=hypothetical protein;protein_id=RUP89521.1;transl_table=11 RBME01000003.1 Genbank gene 40454 40756 . + . ID=gene-D8M40_03925;Name=D8M40_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03925 RBME01000003.1 GeneMarkS+ CDS 40454 40756 . + 0 ID=cds-RUP89522.1;Parent=gene-D8M40_03925;Dbxref=NCBI_GP:RUP89522.1;Name=RUP89522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_03925;product=hypothetical protein;protein_id=RUP89522.1;transl_table=11 RBME01000003.1 Genbank gene 40865 44122 . + . ID=gene-D8M40_03930;Name=D8M40_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03930 RBME01000003.1 Protein Homology CDS 40865 44122 . + 0 ID=cds-RUP89523.1;Parent=gene-D8M40_03930;Dbxref=NCBI_GP:RUP89523.1;Name=RUP89523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00176.21%2CHMM:PF04434.15;locus_tag=D8M40_03930;product=hypothetical protein;protein_id=RUP89523.1;transl_table=11 RBME01000003.1 Genbank gene 44332 45363 . - . ID=gene-D8M40_03935;Name=D8M40_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03935 RBME01000003.1 Protein Homology CDS 44332 45363 . - 0 ID=cds-RUP89524.1;Parent=gene-D8M40_03935;Dbxref=NCBI_GP:RUP89524.1;Name=RUP89524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120194.1;locus_tag=D8M40_03935;product=ArsR family transcriptional regulator;protein_id=RUP89524.1;transl_table=11 RBME01000003.1 Genbank gene 45535 47421 . - . ID=gene-D8M40_03940;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=D8M40_03940 RBME01000003.1 Protein Homology CDS 45535 47421 . - 0 ID=cds-RUP89525.1;Parent=gene-D8M40_03940;Dbxref=NCBI_GP:RUP89525.1;Name=RUP89525.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120195.1;locus_tag=D8M40_03940;product=selenocysteine-specific translation elongation factor;protein_id=RUP89525.1;transl_table=11 RBME01000003.1 Genbank gene 47422 48771 . - . ID=gene-D8M40_03945;Name=D8M40_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03945 RBME01000003.1 Protein Homology CDS 47422 48771 . - 0 ID=cds-RUP89526.1;Parent=gene-D8M40_03945;Dbxref=NCBI_GP:RUP89526.1;Name=RUP89526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022296.1;locus_tag=D8M40_03945;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=RUP89526.1;transl_table=11 RBME01000003.1 Genbank gene 48908 49003 . - . ID=gene-D8M40_03950;Name=D8M40_03950;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_03950 RBME01000003.1 tRNAscan-SE tRNA 48908 49003 . - . ID=rna-D8M40_03950;Parent=gene-D8M40_03950;anticodon=(pos:complement(48966..48968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03950;product=tRNA-Sec RBME01000003.1 tRNAscan-SE exon 48908 49003 . - . ID=exon-D8M40_03950-1;Parent=rna-D8M40_03950;anticodon=(pos:complement(48966..48968));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_03950;product=tRNA-Sec RBME01000003.1 Genbank pseudogene 49050 50048 . + . ID=gene-D8M40_03955;Name=selD;gbkey=Gene;gene=selD;gene_biotype=pseudogene;locus_tag=D8M40_03955;pseudo=true RBME01000003.1 Protein Homology CDS 49050 50048 . + 0 ID=cds-D8M40_03955;Parent=gene-D8M40_03955;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822873.1;locus_tag=D8M40_03955;product=selenide%2C water dikinase SelD;pseudo=true;transl_table=11 RBME01000003.1 Genbank gene 50232 51350 . - . ID=gene-D8M40_03960;Name=D8M40_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03960 RBME01000003.1 Protein Homology CDS 50232 51350 . - 0 ID=cds-RUP89527.1;Parent=gene-D8M40_03960;Dbxref=NCBI_GP:RUP89527.1;Name=RUP89527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323572.1;locus_tag=D8M40_03960;product=nitrite reductase;protein_id=RUP89527.1;transl_table=11 RBME01000003.1 Genbank gene 51347 52504 . - . ID=gene-D8M40_03965;Name=D8M40_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03965 RBME01000003.1 Protein Homology CDS 51347 52504 . - 0 ID=cds-RUP89528.1;Parent=gene-D8M40_03965;Dbxref=NCBI_GP:RUP89528.1;Name=RUP89528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120199.1;locus_tag=D8M40_03965;product=4Fe-4S dicluster domain-containing protein;protein_id=RUP89528.1;transl_table=11 RBME01000003.1 Genbank gene 52509 55220 . - . ID=gene-D8M40_03970;Name=D8M40_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03970 RBME01000003.1 Protein Homology CDS 52509 55220 . - 0 ID=cds-RUP89529.1;Parent=gene-D8M40_03970;Dbxref=NCBI_GP:RUP89529.1;Name=RUP89529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010551295.1;locus_tag=D8M40_03970;product=formate dehydrogenase;protein_id=RUP89529.1;transl_table=11 RBME01000003.1 Genbank gene 55281 55847 . - . ID=gene-D8M40_03975;Name=D8M40_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03975 RBME01000003.1 Protein Homology CDS 55281 55847 . - 0 ID=cds-RUP89621.1;Parent=gene-D8M40_03975;Dbxref=NCBI_GP:RUP89621.1;Name=RUP89621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822869.1;locus_tag=D8M40_03975;product=dehydrogenase;protein_id=RUP89621.1;transl_table=11 RBME01000003.1 Genbank gene 56115 57662 . + . ID=gene-D8M40_03980;Name=D8M40_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03980 RBME01000003.1 Protein Homology CDS 56115 57662 . + 0 ID=cds-RUP89530.1;Parent=gene-D8M40_03980;Dbxref=NCBI_GP:RUP89530.1;Name=RUP89530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120202.1;locus_tag=D8M40_03980;product=dicarboxylate/amino acid:cation symporter;protein_id=RUP89530.1;transl_table=11 RBME01000003.1 Genbank gene 57608 58855 . - . ID=gene-D8M40_03985;Name=D8M40_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03985 RBME01000003.1 Protein Homology CDS 57608 58855 . - 0 ID=cds-RUP89531.1;Parent=gene-D8M40_03985;Dbxref=NCBI_GP:RUP89531.1;Name=RUP89531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309682.1;locus_tag=D8M40_03985;product=ATP-binding protein;protein_id=RUP89531.1;transl_table=11 RBME01000003.1 Genbank gene 59218 59790 . + . ID=gene-D8M40_03990;Name=D8M40_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03990 RBME01000003.1 Protein Homology CDS 59218 59790 . + 0 ID=cds-RUP89532.1;Parent=gene-D8M40_03990;Dbxref=NCBI_GP:RUP89532.1;Name=RUP89532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284644.1;locus_tag=D8M40_03990;product=DUF4065 domain-containing protein;protein_id=RUP89532.1;transl_table=11 RBME01000003.1 Genbank gene 59812 60192 . + . ID=gene-D8M40_03995;Name=D8M40_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_03995 RBME01000003.1 Protein Homology CDS 59812 60192 . + 0 ID=cds-RUP89533.1;Parent=gene-D8M40_03995;Dbxref=NCBI_GP:RUP89533.1;Name=RUP89533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836787.1;locus_tag=D8M40_03995;product=hypothetical protein;protein_id=RUP89533.1;transl_table=11 RBME01000003.1 Genbank gene 60257 61024 . + . ID=gene-D8M40_04000;Name=D8M40_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04000 RBME01000003.1 Protein Homology CDS 60257 61024 . + 0 ID=cds-RUP89534.1;Parent=gene-D8M40_04000;Dbxref=NCBI_GP:RUP89534.1;Name=RUP89534.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01814.21%2CHMM:PF04405.12;locus_tag=D8M40_04000;product=iron-sulfur cluster repair di-iron protein;protein_id=RUP89534.1;transl_table=11 RBME01000003.1 Genbank gene 61065 62330 . - . ID=gene-D8M40_04005;Name=D8M40_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04005 RBME01000003.1 Protein Homology CDS 61065 62330 . - 0 ID=cds-RUP89535.1;Parent=gene-D8M40_04005;Dbxref=NCBI_GP:RUP89535.1;Name=RUP89535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120206.1;locus_tag=D8M40_04005;product=arginine deiminase;protein_id=RUP89535.1;transl_table=11 RBME01000003.1 Genbank gene 62342 63043 . - . ID=gene-D8M40_04010;Name=D8M40_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04010 RBME01000003.1 Protein Homology CDS 62342 63043 . - 0 ID=cds-RUP89536.1;Parent=gene-D8M40_04010;Dbxref=NCBI_GP:RUP89536.1;Name=RUP89536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07947.12;locus_tag=D8M40_04010;product=lysoplasmalogenase;protein_id=RUP89536.1;transl_table=11 RBME01000003.1 Genbank gene 63071 63697 . - . ID=gene-D8M40_04015;Name=D8M40_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04015 RBME01000003.1 Protein Homology CDS 63071 63697 . - 0 ID=cds-RUP89537.1;Parent=gene-D8M40_04015;Dbxref=NCBI_GP:RUP89537.1;Name=RUP89537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327737.1;locus_tag=D8M40_04015;product=class I SAM-dependent methyltransferase;protein_id=RUP89537.1;transl_table=11 RBME01000003.1 Genbank gene 63809 64267 . - . ID=gene-D8M40_04020;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=D8M40_04020 RBME01000003.1 Protein Homology CDS 63809 64267 . - 0 ID=cds-RUP89538.1;Parent=gene-D8M40_04020;Dbxref=NCBI_GP:RUP89538.1;Name=RUP89538.1;gbkey=CDS;gene=cynS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019929908.1;locus_tag=D8M40_04020;product=cyanase;protein_id=RUP89538.1;transl_table=11 RBME01000003.1 Genbank gene 64408 65049 . + . ID=gene-D8M40_04025;Name=D8M40_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04025 RBME01000003.1 Protein Homology CDS 64408 65049 . + 0 ID=cds-RUP89539.1;Parent=gene-D8M40_04025;Dbxref=NCBI_GP:RUP89539.1;Name=RUP89539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120211.1;locus_tag=D8M40_04025;product=Fic family protein;protein_id=RUP89539.1;transl_table=11 RBME01000003.1 Genbank gene 65118 65193 . - . ID=gene-D8M40_04030;Name=D8M40_04030;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_04030 RBME01000003.1 tRNAscan-SE tRNA 65118 65193 . - . ID=rna-D8M40_04030;Parent=gene-D8M40_04030;anticodon=(pos:complement(65158..65160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04030;product=tRNA-Arg RBME01000003.1 tRNAscan-SE exon 65118 65193 . - . ID=exon-D8M40_04030-1;Parent=rna-D8M40_04030;anticodon=(pos:complement(65158..65160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04030;product=tRNA-Arg RBME01000003.1 Genbank gene 65331 66914 . - . ID=gene-D8M40_04035;Name=D8M40_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04035 RBME01000003.1 Protein Homology CDS 65331 66914 . - 0 ID=cds-RUP89540.1;Parent=gene-D8M40_04035;Dbxref=NCBI_GP:RUP89540.1;Name=RUP89540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599478.1;locus_tag=D8M40_04035;product=DASS family sodium-coupled anion symporter;protein_id=RUP89540.1;transl_table=11 RBME01000003.1 Genbank gene 66982 68346 . - . ID=gene-D8M40_04040;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=D8M40_04040 RBME01000003.1 Protein Homology CDS 66982 68346 . - 0 ID=cds-RUP89541.1;Parent=gene-D8M40_04040;Dbxref=NCBI_GP:RUP89541.1;Name=RUP89541.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191304.1;locus_tag=D8M40_04040;product=magnesium transporter;protein_id=RUP89541.1;transl_table=11 RBME01000003.1 Genbank gene 68567 69301 . - . ID=gene-D8M40_04045;Name=D8M40_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04045 RBME01000003.1 GeneMarkS+ CDS 68567 69301 . - 0 ID=cds-RUP89542.1;Parent=gene-D8M40_04045;Dbxref=NCBI_GP:RUP89542.1;Name=RUP89542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04045;product=hypothetical protein;protein_id=RUP89542.1;transl_table=11 RBME01000003.1 Genbank gene 69331 70701 . - . ID=gene-D8M40_04050;Name=D8M40_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04050 RBME01000003.1 Protein Homology CDS 69331 70701 . - 0 ID=cds-RUP89543.1;Parent=gene-D8M40_04050;Dbxref=NCBI_GP:RUP89543.1;Name=RUP89543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04235.10;locus_tag=D8M40_04050;product=DUF1624 domain-containing protein;protein_id=RUP89543.1;transl_table=11 RBME01000003.1 Genbank gene 70843 70931 . - . ID=gene-D8M40_04055;Name=D8M40_04055;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_04055 RBME01000003.1 tRNAscan-SE tRNA 70843 70931 . - . ID=rna-D8M40_04055;Parent=gene-D8M40_04055;anticodon=(pos:complement(70895..70897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04055;product=tRNA-Ser RBME01000003.1 tRNAscan-SE exon 70843 70931 . - . ID=exon-D8M40_04055-1;Parent=rna-D8M40_04055;anticodon=(pos:complement(70895..70897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04055;product=tRNA-Ser RBME01000003.1 Genbank gene 70957 72030 . + . ID=gene-D8M40_04060;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D8M40_04060 RBME01000003.1 Protein Homology CDS 70957 72030 . + 0 ID=cds-RUP89544.1;Parent=gene-D8M40_04060;Dbxref=NCBI_GP:RUP89544.1;Name=RUP89544.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120216.1;locus_tag=D8M40_04060;product=histidinol-phosphate transaminase;protein_id=RUP89544.1;transl_table=11 RBME01000003.1 Genbank gene 72030 72449 . + . ID=gene-D8M40_04065;Name=D8M40_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04065 RBME01000003.1 Protein Homology CDS 72030 72449 . + 0 ID=cds-RUP89545.1;Parent=gene-D8M40_04065;Dbxref=NCBI_GP:RUP89545.1;Name=RUP89545.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04020.11;locus_tag=D8M40_04065;product=phage holin family protein;protein_id=RUP89545.1;transl_table=11 RBME01000003.1 Genbank gene 72625 73755 . - . ID=gene-D8M40_04070;Name=D8M40_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04070 RBME01000003.1 Protein Homology CDS 72625 73755 . - 0 ID=cds-RUP89546.1;Parent=gene-D8M40_04070;Dbxref=NCBI_GP:RUP89546.1;Name=RUP89546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120218.1;locus_tag=D8M40_04070;product=LLM class flavin-dependent oxidoreductase;protein_id=RUP89546.1;transl_table=11 RBME01000003.1 Genbank gene 74144 74365 . + . ID=gene-D8M40_04075;Name=D8M40_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04075 RBME01000003.1 Protein Homology CDS 74144 74365 . + 0 ID=cds-RUP89547.1;Parent=gene-D8M40_04075;Dbxref=NCBI_GP:RUP89547.1;Name=RUP89547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310898.1;locus_tag=D8M40_04075;product=hypothetical protein;protein_id=RUP89547.1;transl_table=11 RBME01000003.1 Genbank gene 74501 74588 . - . ID=gene-D8M40_04080;Name=D8M40_04080;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_04080 RBME01000003.1 tRNAscan-SE tRNA 74501 74588 . - . ID=rna-D8M40_04080;Parent=gene-D8M40_04080;anticodon=(pos:complement(74552..74554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04080;product=tRNA-Ser RBME01000003.1 tRNAscan-SE exon 74501 74588 . - . ID=exon-D8M40_04080-1;Parent=rna-D8M40_04080;anticodon=(pos:complement(74552..74554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_04080;product=tRNA-Ser RBME01000003.1 Genbank gene 74694 75656 . + . ID=gene-D8M40_04085;Name=D8M40_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04085 RBME01000003.1 Protein Homology CDS 74694 75656 . + 0 ID=cds-RUP89622.1;Parent=gene-D8M40_04085;Dbxref=NCBI_GP:RUP89622.1;Name=RUP89622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022928.1;locus_tag=D8M40_04085;product=NAD(P)H-quinone oxidoreductase;protein_id=RUP89622.1;transl_table=11 RBME01000003.1 Genbank gene 75851 77086 . - . ID=gene-D8M40_04090;Name=D8M40_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04090 RBME01000003.1 Protein Homology CDS 75851 77086 . - 0 ID=cds-RUP89548.1;Parent=gene-D8M40_04090;Dbxref=NCBI_GP:RUP89548.1;Name=RUP89548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120220.1;locus_tag=D8M40_04090;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=RUP89548.1;transl_table=11 RBME01000003.1 Genbank gene 77309 78160 . + . ID=gene-D8M40_04095;Name=D8M40_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04095 RBME01000003.1 Protein Homology CDS 77309 78160 . + 0 ID=cds-RUP89623.1;Parent=gene-D8M40_04095;Dbxref=NCBI_GP:RUP89623.1;Name=RUP89623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018485.1;locus_tag=D8M40_04095;product=ABC transporter permease;protein_id=RUP89623.1;transl_table=11 RBME01000003.1 Genbank gene 78206 78991 . + . ID=gene-D8M40_04100;Name=D8M40_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04100 RBME01000003.1 Protein Homology CDS 78206 78991 . + 0 ID=cds-RUP89549.1;Parent=gene-D8M40_04100;Dbxref=NCBI_GP:RUP89549.1;Name=RUP89549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188329.1;locus_tag=D8M40_04100;product=ABC transporter ATP-binding protein;protein_id=RUP89549.1;transl_table=11 RBME01000003.1 Genbank gene 79036 79980 . + . ID=gene-D8M40_04105;Name=D8M40_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04105 RBME01000003.1 Protein Homology CDS 79036 79980 . + 0 ID=cds-RUP89550.1;Parent=gene-D8M40_04105;Dbxref=NCBI_GP:RUP89550.1;Name=RUP89550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022923.1;locus_tag=D8M40_04105;product=glycosyltransferase family 2 protein;protein_id=RUP89550.1;transl_table=11 RBME01000003.1 Genbank pseudogene 80290 80493 . - . ID=gene-D8M40_04110;Name=D8M40_04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04110;pseudo=true RBME01000003.1 Protein Homology CDS 80290 80493 . - 0 ID=cds-D8M40_04110;Parent=gene-D8M40_04110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014523775.1;locus_tag=D8M40_04110;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000003.1 Genbank gene 80620 81087 . - . ID=gene-D8M40_04115;Name=D8M40_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04115 RBME01000003.1 Protein Homology CDS 80620 81087 . - 0 ID=cds-RUP89551.1;Parent=gene-D8M40_04115;Dbxref=NCBI_GP:RUP89551.1;Name=RUP89551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120225.1;locus_tag=D8M40_04115;product=GtrA family protein;protein_id=RUP89551.1;transl_table=11 RBME01000003.1 Genbank gene 81135 81992 . - . ID=gene-D8M40_04120;Name=D8M40_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04120 RBME01000003.1 GeneMarkS+ CDS 81135 81992 . - 0 ID=cds-RUP89552.1;Parent=gene-D8M40_04120;Dbxref=NCBI_GP:RUP89552.1;Name=RUP89552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04120;product=hypothetical protein;protein_id=RUP89552.1;transl_table=11 RBME01000003.1 Genbank gene 82059 82307 . + . ID=gene-D8M40_04125;Name=D8M40_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04125 RBME01000003.1 Protein Homology CDS 82059 82307 . + 0 ID=cds-RUP89553.1;Parent=gene-D8M40_04125;Dbxref=NCBI_GP:RUP89553.1;Name=RUP89553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120227.1;locus_tag=D8M40_04125;product=hypothetical protein;protein_id=RUP89553.1;transl_table=11 RBME01000003.1 Genbank gene 82316 83731 . + . ID=gene-D8M40_04130;Name=D8M40_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04130 RBME01000003.1 Protein Homology CDS 82316 83731 . + 0 ID=cds-RUP89554.1;Parent=gene-D8M40_04130;Dbxref=NCBI_GP:RUP89554.1;Name=RUP89554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012361183.1;locus_tag=D8M40_04130;product=FAD-binding oxidoreductase;protein_id=RUP89554.1;transl_table=11 RBME01000003.1 Genbank gene 83761 84522 . + . ID=gene-D8M40_04135;Name=D8M40_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04135 RBME01000003.1 Protein Homology CDS 83761 84522 . + 0 ID=cds-RUP89555.1;Parent=gene-D8M40_04135;Dbxref=NCBI_GP:RUP89555.1;Name=RUP89555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323212.1;locus_tag=D8M40_04135;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=RUP89555.1;transl_table=11 RBME01000003.1 Genbank gene 84553 86451 . + . ID=gene-D8M40_04140;Name=D8M40_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04140 RBME01000003.1 Protein Homology CDS 84553 86451 . + 0 ID=cds-RUP89556.1;Parent=gene-D8M40_04140;Dbxref=NCBI_GP:RUP89556.1;Name=RUP89556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120230.1;locus_tag=D8M40_04140;product=hypothetical protein;protein_id=RUP89556.1;transl_table=11 RBME01000003.1 Genbank gene 86676 89900 . + . ID=gene-D8M40_04145;Name=D8M40_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04145 RBME01000003.1 Protein Homology CDS 86676 89900 . + 0 ID=cds-RUP89624.1;Parent=gene-D8M40_04145;Dbxref=NCBI_GP:RUP89624.1;Name=RUP89624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280635.1;locus_tag=D8M40_04145;product=arabinosyltransferase;protein_id=RUP89624.1;transl_table=11 RBME01000003.1 Genbank gene 89904 91913 . + . ID=gene-D8M40_04150;Name=D8M40_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04150 RBME01000003.1 GeneMarkS+ CDS 89904 91913 . + 0 ID=cds-RUP89557.1;Parent=gene-D8M40_04150;Dbxref=NCBI_GP:RUP89557.1;Name=RUP89557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04150;product=hypothetical protein;protein_id=RUP89557.1;transl_table=11 RBME01000003.1 Genbank gene 91938 92870 . + . ID=gene-D8M40_04155;Name=D8M40_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04155 RBME01000003.1 Protein Homology CDS 91938 92870 . + 0 ID=cds-RUP89558.1;Parent=gene-D8M40_04155;Dbxref=NCBI_GP:RUP89558.1;Name=RUP89558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120233.1;locus_tag=D8M40_04155;product=NAD-dependent epimerase/dehydratase family protein;protein_id=RUP89558.1;transl_table=11 RBME01000003.1 Genbank gene 92842 93234 . - . ID=gene-D8M40_04160;Name=D8M40_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04160 RBME01000003.1 Protein Homology CDS 92842 93234 . - 0 ID=cds-RUP89559.1;Parent=gene-D8M40_04160;Dbxref=NCBI_GP:RUP89559.1;Name=RUP89559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120234.1;locus_tag=D8M40_04160;product=DUF2304 domain-containing protein;protein_id=RUP89559.1;transl_table=11 RBME01000003.1 Genbank gene 93235 93927 . - . ID=gene-D8M40_04165;Name=D8M40_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04165 RBME01000003.1 Protein Homology CDS 93235 93927 . - 0 ID=cds-RUP89560.1;Parent=gene-D8M40_04165;Dbxref=NCBI_GP:RUP89560.1;Name=RUP89560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007629810.1;locus_tag=D8M40_04165;product=glycosyltransferase family 2 protein;protein_id=RUP89560.1;transl_table=11 RBME01000003.1 Genbank gene 93944 95221 . - . ID=gene-D8M40_04170;Name=D8M40_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04170 RBME01000003.1 GeneMarkS+ CDS 93944 95221 . - 0 ID=cds-RUP89561.1;Parent=gene-D8M40_04170;Dbxref=NCBI_GP:RUP89561.1;Name=RUP89561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04170;product=polysaccharide biosynthesis protein;protein_id=RUP89561.1;transl_table=11 RBME01000003.1 Genbank gene 95255 96112 . - . ID=gene-D8M40_04175;Name=D8M40_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04175 RBME01000003.1 Protein Homology CDS 95255 96112 . - 0 ID=cds-RUP89562.1;Parent=gene-D8M40_04175;Dbxref=NCBI_GP:RUP89562.1;Name=RUP89562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13641.4;locus_tag=D8M40_04175;product=glycosyltransferase;protein_id=RUP89562.1;transl_table=11 RBME01000003.1 Genbank gene 96112 96993 . - . ID=gene-D8M40_04180;Name=D8M40_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04180 RBME01000003.1 Protein Homology CDS 96112 96993 . - 0 ID=cds-RUP89563.1;Parent=gene-D8M40_04180;Dbxref=NCBI_GP:RUP89563.1;Name=RUP89563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07859.11;locus_tag=D8M40_04180;product=hypothetical protein;protein_id=RUP89563.1;transl_table=11 RBME01000003.1 Genbank gene 97099 97713 . + . ID=gene-D8M40_04185;Name=D8M40_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04185 RBME01000003.1 GeneMarkS+ CDS 97099 97713 . + 0 ID=cds-RUP89564.1;Parent=gene-D8M40_04185;Dbxref=NCBI_GP:RUP89564.1;Name=RUP89564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04185;product=hypothetical protein;protein_id=RUP89564.1;transl_table=11 RBME01000003.1 Genbank gene 97738 99729 . - . ID=gene-D8M40_04190;Name=D8M40_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04190 RBME01000003.1 Protein Homology CDS 97738 99729 . - 0 ID=cds-RUP89565.1;Parent=gene-D8M40_04190;Dbxref=NCBI_GP:RUP89565.1;Name=RUP89565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120240.1;locus_tag=D8M40_04190;product=peptidase M13;protein_id=RUP89565.1;transl_table=11 RBME01000003.1 Genbank gene 99758 100462 . + . ID=gene-D8M40_04195;Name=D8M40_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04195 RBME01000003.1 GeneMarkS+ CDS 99758 100462 . + 0 ID=cds-RUP89566.1;Parent=gene-D8M40_04195;Dbxref=NCBI_GP:RUP89566.1;Name=RUP89566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04195;product=hypothetical protein;protein_id=RUP89566.1;transl_table=11 RBME01000003.1 Genbank gene 100465 101328 . + . ID=gene-D8M40_04200;Name=D8M40_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04200 RBME01000003.1 Protein Homology CDS 100465 101328 . + 0 ID=cds-RUP89567.1;Parent=gene-D8M40_04200;Dbxref=NCBI_GP:RUP89567.1;Name=RUP89567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13367.4;locus_tag=D8M40_04200;product=protease PrsW;protein_id=RUP89567.1;transl_table=11 RBME01000003.1 Genbank gene 101297 102895 . - . ID=gene-D8M40_04205;Name=D8M40_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04205 RBME01000003.1 Protein Homology CDS 101297 102895 . - 0 ID=cds-RUP89568.1;Parent=gene-D8M40_04205;Dbxref=NCBI_GP:RUP89568.1;Name=RUP89568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120243.1;locus_tag=D8M40_04205;product=aldehyde dehydrogenase family protein;protein_id=RUP89568.1;transl_table=11 RBME01000003.1 Genbank gene 103014 103739 . - . ID=gene-D8M40_04210;Name=D8M40_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04210 RBME01000003.1 Protein Homology CDS 103014 103739 . - 0 ID=cds-RUP89569.1;Parent=gene-D8M40_04210;Dbxref=NCBI_GP:RUP89569.1;Name=RUP89569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120244.1;locus_tag=D8M40_04210;product=S1 family peptidase;protein_id=RUP89569.1;transl_table=11 RBME01000003.1 Genbank gene 103953 104828 . - . ID=gene-D8M40_04215;Name=D8M40_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04215 RBME01000003.1 Protein Homology CDS 103953 104828 . - 0 ID=cds-RUP89570.1;Parent=gene-D8M40_04215;Dbxref=NCBI_GP:RUP89570.1;Name=RUP89570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120245.1;locus_tag=D8M40_04215;product=S1 family peptidase;protein_id=RUP89570.1;transl_table=11 RBME01000003.1 Genbank gene 105386 107575 . - . ID=gene-D8M40_04220;Name=D8M40_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04220 RBME01000003.1 Protein Homology CDS 105386 107575 . - 0 ID=cds-RUP89571.1;Parent=gene-D8M40_04220;Dbxref=NCBI_GP:RUP89571.1;Name=RUP89571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120246.1;locus_tag=D8M40_04220;product=BCCT family transporter;protein_id=RUP89571.1;transl_table=11 RBME01000003.1 Genbank gene 107789 109561 . + . ID=gene-D8M40_04225;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=D8M40_04225 RBME01000003.1 Protein Homology CDS 107789 109561 . + 0 ID=cds-RUP89625.1;Parent=gene-D8M40_04225;Dbxref=NCBI_GP:RUP89625.1;Name=RUP89625.1;gbkey=CDS;gene=betA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530497.1;locus_tag=D8M40_04225;product=choline dehydrogenase;protein_id=RUP89625.1;transl_table=11 RBME01000003.1 Genbank gene 109578 111176 . - . ID=gene-D8M40_04230;Name=D8M40_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04230 RBME01000003.1 Protein Homology CDS 109578 111176 . - 0 ID=cds-RUP89572.1;Parent=gene-D8M40_04230;Dbxref=NCBI_GP:RUP89572.1;Name=RUP89572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120248.1;locus_tag=D8M40_04230;product=PepSY domain-containing protein;protein_id=RUP89572.1;transl_table=11 RBME01000003.1 Genbank gene 111404 112354 . + . ID=gene-D8M40_04235;Name=D8M40_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04235 RBME01000003.1 Protein Homology CDS 111404 112354 . + 0 ID=cds-RUP89573.1;Parent=gene-D8M40_04235;Dbxref=NCBI_GP:RUP89573.1;Name=RUP89573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01263.18;locus_tag=D8M40_04235;product=aldose epimerase;protein_id=RUP89573.1;transl_table=11 RBME01000003.1 Genbank gene 112523 114178 . + . ID=gene-D8M40_04240;Name=D8M40_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04240 RBME01000003.1 Protein Homology CDS 112523 114178 . + 0 ID=cds-RUP89574.1;Parent=gene-D8M40_04240;Dbxref=NCBI_GP:RUP89574.1;Name=RUP89574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303240.1;locus_tag=D8M40_04240;product=Na+/galactose cotransporter;protein_id=RUP89574.1;transl_table=11 RBME01000003.1 Genbank gene 114197 114529 . + . ID=gene-D8M40_04245;Name=D8M40_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04245 RBME01000003.1 Protein Homology CDS 114197 114529 . + 0 ID=cds-RUP89575.1;Parent=gene-D8M40_04245;Dbxref=NCBI_GP:RUP89575.1;Name=RUP89575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120251.1;locus_tag=D8M40_04245;product=hypothetical protein;protein_id=RUP89575.1;transl_table=11 RBME01000003.1 Genbank gene 114532 115794 . + . ID=gene-D8M40_04250;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=D8M40_04250 RBME01000003.1 Protein Homology CDS 114532 115794 . + 0 ID=cds-RUP89576.1;Parent=gene-D8M40_04250;Dbxref=NCBI_GP:RUP89576.1;Name=RUP89576.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005296822.1;locus_tag=D8M40_04250;product=galactose-1-phosphate uridylyltransferase;protein_id=RUP89576.1;transl_table=11 RBME01000003.1 Genbank gene 115787 117088 . + . ID=gene-D8M40_04255;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=D8M40_04255 RBME01000003.1 Protein Homology CDS 115787 117088 . + 0 ID=cds-RUP89577.1;Parent=gene-D8M40_04255;Dbxref=NCBI_GP:RUP89577.1;Name=RUP89577.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934744.1;locus_tag=D8M40_04255;product=galactokinase;protein_id=RUP89577.1;transl_table=11 RBME01000003.1 Genbank gene 117228 117641 . + . ID=gene-D8M40_04260;Name=D8M40_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04260 RBME01000003.1 Protein Homology CDS 117228 117641 . + 0 ID=cds-RUP89578.1;Parent=gene-D8M40_04260;Dbxref=NCBI_GP:RUP89578.1;Name=RUP89578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360928.1;locus_tag=D8M40_04260;product=aspartate 1-decarboxylase;protein_id=RUP89578.1;transl_table=11 RBME01000003.1 Genbank gene 117663 119093 . + . ID=gene-D8M40_04265;Name=D8M40_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04265 RBME01000003.1 Protein Homology CDS 117663 119093 . + 0 ID=cds-RUP89579.1;Parent=gene-D8M40_04265;Dbxref=NCBI_GP:RUP89579.1;Name=RUP89579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015490686.1;locus_tag=D8M40_04265;product=DASS family sodium-coupled anion symporter;protein_id=RUP89579.1;transl_table=11 RBME01000003.1 Genbank gene 119110 120417 . - . ID=gene-D8M40_04270;Name=D8M40_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04270 RBME01000003.1 Protein Homology CDS 119110 120417 . - 0 ID=cds-RUP89626.1;Parent=gene-D8M40_04270;Dbxref=NCBI_GP:RUP89626.1;Name=RUP89626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279191.1;locus_tag=D8M40_04270;product=anaerobic C4-dicarboxylate transporter;protein_id=RUP89626.1;transl_table=11 RBME01000003.1 Genbank gene 120961 122598 . + . ID=gene-D8M40_04275;Name=D8M40_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04275 RBME01000003.1 Protein Homology CDS 120961 122598 . + 0 ID=cds-RUP89580.1;Parent=gene-D8M40_04275;Dbxref=NCBI_GP:RUP89580.1;Name=RUP89580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120258.1;locus_tag=D8M40_04275;product=HNH endonuclease;protein_id=RUP89580.1;transl_table=11 RBME01000003.1 Genbank gene 122952 123617 . + . ID=gene-D8M40_04280;Name=D8M40_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04280 RBME01000003.1 Protein Homology CDS 122952 123617 . + 0 ID=cds-RUP89581.1;Parent=gene-D8M40_04280;Dbxref=NCBI_GP:RUP89581.1;Name=RUP89581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120276.1;locus_tag=D8M40_04280;product=MOSC domain-containing protein;protein_id=RUP89581.1;transl_table=11 RBME01000003.1 Genbank gene 123744 125108 . + . ID=gene-D8M40_04285;Name=D8M40_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04285 RBME01000003.1 Protein Homology CDS 123744 125108 . + 0 ID=cds-RUP89582.1;Parent=gene-D8M40_04285;Dbxref=NCBI_GP:RUP89582.1;Name=RUP89582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005275975.1;locus_tag=D8M40_04285;product=MFS transporter;protein_id=RUP89582.1;transl_table=11 RBME01000003.1 Genbank gene 125319 126149 . - . ID=gene-D8M40_04290;Name=D8M40_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04290 RBME01000003.1 Protein Homology CDS 125319 126149 . - 0 ID=cds-RUP89583.1;Parent=gene-D8M40_04290;Dbxref=NCBI_GP:RUP89583.1;Name=RUP89583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323224.1;locus_tag=D8M40_04290;product=VOC family protein;protein_id=RUP89583.1;transl_table=11 RBME01000003.1 Genbank gene 126149 126469 . - . ID=gene-D8M40_04295;Name=D8M40_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04295 RBME01000003.1 Protein Homology CDS 126149 126469 . - 0 ID=cds-RUP89584.1;Parent=gene-D8M40_04295;Dbxref=NCBI_GP:RUP89584.1;Name=RUP89584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120288.1;locus_tag=D8M40_04295;product=RNA-binding S4 domain-containing protein;protein_id=RUP89584.1;transl_table=11 RBME01000003.1 Genbank gene 126503 127231 . - . ID=gene-D8M40_04300;Name=D8M40_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04300 RBME01000003.1 Protein Homology CDS 126503 127231 . - 0 ID=cds-RUP89585.1;Parent=gene-D8M40_04300;Dbxref=NCBI_GP:RUP89585.1;Name=RUP89585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120289.1;locus_tag=D8M40_04300;product=SDR family oxidoreductase;protein_id=RUP89585.1;transl_table=11 RBME01000003.1 Genbank gene 127264 128316 . + . ID=gene-D8M40_04305;Name=D8M40_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04305 RBME01000003.1 Protein Homology CDS 127264 128316 . + 0 ID=cds-RUP89586.1;Parent=gene-D8M40_04305;Dbxref=NCBI_GP:RUP89586.1;Name=RUP89586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582474.1;locus_tag=D8M40_04305;product=AbrB family transcriptional regulator;protein_id=RUP89586.1;transl_table=11 RBME01000003.1 Genbank gene 128928 129275 . - . ID=gene-D8M40_04310;Name=D8M40_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04310 RBME01000003.1 GeneMarkS+ CDS 128928 129275 . - 0 ID=cds-RUP89587.1;Parent=gene-D8M40_04310;Dbxref=NCBI_GP:RUP89587.1;Name=RUP89587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04310;product=hypothetical protein;protein_id=RUP89587.1;transl_table=11 RBME01000003.1 Genbank direct_repeat 129396 130033 . + . ID=id-RBME01000003.1:129396..130033;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=129396..129423;rpt_unit_seq=ggctcatccccgcatgcgcggggaaaac RBME01000003.1 Genbank gene 130401 133193 . + . ID=gene-D8M40_04315;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=D8M40_04315 RBME01000003.1 Protein Homology CDS 130401 133193 . + 0 ID=cds-RUP89627.1;Parent=gene-D8M40_04315;Dbxref=NCBI_GP:RUP89627.1;Name=RUP89627.1;gbkey=CDS;gene=cas3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284085.1;locus_tag=D8M40_04315;product=CRISPR-associated helicase Cas3';protein_id=RUP89627.1;transl_table=11 RBME01000003.1 Genbank gene 133239 134951 . + . ID=gene-D8M40_04320;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;locus_tag=D8M40_04320 RBME01000003.1 Protein Homology CDS 133239 134951 . + 0 ID=cds-RUP89588.1;Parent=gene-D8M40_04320;Dbxref=NCBI_GP:RUP89588.1;Name=RUP89588.1;gbkey=CDS;gene=casA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328198.1;locus_tag=D8M40_04320;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=RUP89588.1;transl_table=11 RBME01000003.1 Genbank gene 134944 135561 . + . ID=gene-D8M40_04325;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=D8M40_04325 RBME01000003.1 Protein Homology CDS 134944 135561 . + 0 ID=cds-RUP89589.1;Parent=gene-D8M40_04325;Dbxref=NCBI_GP:RUP89589.1;Name=RUP89589.1;gbkey=CDS;gene=casB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118256.1;locus_tag=D8M40_04325;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=RUP89589.1;transl_table=11 RBME01000003.1 Genbank gene 135588 136718 . + . ID=gene-D8M40_04330;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=D8M40_04330 RBME01000003.1 Protein Homology CDS 135588 136718 . + 0 ID=cds-RUP89590.1;Parent=gene-D8M40_04330;Dbxref=NCBI_GP:RUP89590.1;Name=RUP89590.1;gbkey=CDS;gene=cas7e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013889408.1;locus_tag=D8M40_04330;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=RUP89590.1;transl_table=11 RBME01000003.1 Genbank gene 136720 137442 . + . ID=gene-D8M40_04335;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=D8M40_04335 RBME01000003.1 Protein Homology CDS 136720 137442 . + 0 ID=cds-RUP89591.1;Parent=gene-D8M40_04335;Dbxref=NCBI_GP:RUP89591.1;Name=RUP89591.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187429.1;locus_tag=D8M40_04335;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=RUP89591.1;transl_table=11 RBME01000003.1 Genbank gene 137439 138086 . + . ID=gene-D8M40_04340;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=D8M40_04340 RBME01000003.1 Protein Homology CDS 137439 138086 . + 0 ID=cds-RUP89592.1;Parent=gene-D8M40_04340;Dbxref=NCBI_GP:RUP89592.1;Name=RUP89592.1;gbkey=CDS;gene=cas6e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004008257.1;locus_tag=D8M40_04340;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=RUP89592.1;transl_table=11 RBME01000003.1 Genbank gene 138092 139036 . + . ID=gene-D8M40_04345;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=D8M40_04345 RBME01000003.1 Protein Homology CDS 138092 139036 . + 0 ID=cds-RUP89593.1;Parent=gene-D8M40_04345;Dbxref=NCBI_GP:RUP89593.1;Name=RUP89593.1;gbkey=CDS;gene=cas1e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187422.1;locus_tag=D8M40_04345;product=type I-E CRISPR-associated endonuclease Cas1;protein_id=RUP89593.1;transl_table=11 RBME01000003.1 Genbank gene 139033 139377 . + . ID=gene-D8M40_04350;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=D8M40_04350 RBME01000003.1 Protein Homology CDS 139033 139377 . + 0 ID=cds-RUP89594.1;Parent=gene-D8M40_04350;Dbxref=NCBI_GP:RUP89594.1;Name=RUP89594.1;gbkey=CDS;gene=cas2e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187420.1;locus_tag=D8M40_04350;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=RUP89594.1;transl_table=11 RBME01000003.1 Genbank gene 139398 141089 . - . ID=gene-D8M40_04355;Name=D8M40_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04355 RBME01000003.1 Protein Homology CDS 139398 141089 . - 0 ID=cds-RUP89628.1;Parent=gene-D8M40_04355;Dbxref=NCBI_GP:RUP89628.1;Name=RUP89628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188270.1;locus_tag=D8M40_04355;product=DUF885 domain-containing protein;protein_id=RUP89628.1;transl_table=11 RBME01000003.1 Genbank gene 141283 142518 . + . ID=gene-D8M40_04360;Name=D8M40_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04360 RBME01000003.1 Protein Homology CDS 141283 142518 . + 0 ID=cds-RUP89595.1;Parent=gene-D8M40_04360;Dbxref=NCBI_GP:RUP89595.1;Name=RUP89595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120297.1;locus_tag=D8M40_04360;product=ROK family transcriptional regulator;protein_id=RUP89595.1;transl_table=11 RBME01000003.1 Genbank gene 142536 143093 . - . ID=gene-D8M40_04365;Name=D8M40_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04365 RBME01000003.1 Protein Homology CDS 142536 143093 . - 0 ID=cds-RUP89596.1;Parent=gene-D8M40_04365;Dbxref=NCBI_GP:RUP89596.1;Name=RUP89596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120298.1;locus_tag=D8M40_04365;product=gamma carbonic anhydrase family protein;protein_id=RUP89596.1;transl_table=11 RBME01000003.1 Genbank gene 143180 143800 . - . ID=gene-D8M40_04370;Name=D8M40_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04370 RBME01000003.1 GeneMarkS+ CDS 143180 143800 . - 0 ID=cds-RUP89597.1;Parent=gene-D8M40_04370;Dbxref=NCBI_GP:RUP89597.1;Name=RUP89597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04370;product=HAD family hydrolase;protein_id=RUP89597.1;transl_table=11 RBME01000003.1 Genbank gene 143908 146127 . - . ID=gene-D8M40_04375;Name=D8M40_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04375 RBME01000003.1 Protein Homology CDS 143908 146127 . - 0 ID=cds-RUP89598.1;Parent=gene-D8M40_04375;Dbxref=NCBI_GP:RUP89598.1;Name=RUP89598.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12799.5;locus_tag=D8M40_04375;product=hypothetical protein;protein_id=RUP89598.1;transl_table=11 RBME01000003.1 Genbank gene 146289 146603 . - . ID=gene-D8M40_04380;Name=D8M40_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04380 RBME01000003.1 GeneMarkS+ CDS 146289 146603 . - 0 ID=cds-RUP89599.1;Parent=gene-D8M40_04380;Dbxref=NCBI_GP:RUP89599.1;Name=RUP89599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04380;product=hypothetical protein;protein_id=RUP89599.1;transl_table=11 RBME01000003.1 Genbank gene 146717 147574 . - . ID=gene-D8M40_04385;Name=D8M40_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04385 RBME01000003.1 Protein Homology CDS 146717 147574 . - 0 ID=cds-RUP89600.1;Parent=gene-D8M40_04385;Dbxref=NCBI_GP:RUP89600.1;Name=RUP89600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241313.1;locus_tag=D8M40_04385;product=heme ABC transporter ATP-binding protein;protein_id=RUP89600.1;transl_table=11 RBME01000003.1 Genbank gene 147571 148656 . - . ID=gene-D8M40_04390;Name=D8M40_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04390 RBME01000003.1 Protein Homology CDS 147571 148656 . - 0 ID=cds-RUP89601.1;Parent=gene-D8M40_04390;Dbxref=NCBI_GP:RUP89601.1;Name=RUP89601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303015.1;locus_tag=D8M40_04390;product=iron ABC transporter permease;protein_id=RUP89601.1;transl_table=11 RBME01000003.1 Genbank gene 148610 149704 . - . ID=gene-D8M40_04395;Name=D8M40_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04395 RBME01000003.1 Protein Homology CDS 148610 149704 . - 0 ID=cds-RUP89602.1;Parent=gene-D8M40_04395;Dbxref=NCBI_GP:RUP89602.1;Name=RUP89602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190610.1;locus_tag=D8M40_04395;product=hemin ABC transporter substrate-binding protein;protein_id=RUP89602.1;transl_table=11 RBME01000003.1 Genbank gene 149813 151702 . - . ID=gene-D8M40_04400;Name=D8M40_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04400 RBME01000003.1 Protein Homology CDS 149813 151702 . - 0 ID=cds-RUP89603.1;Parent=gene-D8M40_04400;Dbxref=NCBI_GP:RUP89603.1;Name=RUP89603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280752.1;locus_tag=D8M40_04400;product=hypothetical protein;protein_id=RUP89603.1;transl_table=11 RBME01000003.1 Genbank gene 151864 152448 . + . ID=gene-D8M40_04405;Name=D8M40_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04405 RBME01000003.1 GeneMarkS+ CDS 151864 152448 . + 0 ID=cds-RUP89604.1;Parent=gene-D8M40_04405;Dbxref=NCBI_GP:RUP89604.1;Name=RUP89604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04405;product=hypothetical protein;protein_id=RUP89604.1;transl_table=11 RBME01000003.1 Genbank gene 152667 155408 . - . ID=gene-D8M40_04410;Name=D8M40_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04410 RBME01000003.1 Protein Homology CDS 152667 155408 . - 0 ID=cds-RUP89605.1;Parent=gene-D8M40_04410;Dbxref=NCBI_GP:RUP89605.1;Name=RUP89605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M40_04410;product=hypothetical protein;protein_id=RUP89605.1;transl_table=11 RBME01000003.1 Genbank gene 155538 156503 . - . ID=gene-D8M40_04415;Name=D8M40_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04415 RBME01000003.1 Protein Homology CDS 155538 156503 . - 0 ID=cds-RUP89606.1;Parent=gene-D8M40_04415;Dbxref=NCBI_GP:RUP89606.1;Name=RUP89606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M40_04415;product=hypothetical protein;protein_id=RUP89606.1;transl_table=11 RBME01000003.1 Genbank gene 156955 159168 . - . ID=gene-D8M40_04420;Name=D8M40_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04420 RBME01000003.1 Protein Homology CDS 156955 159168 . - 0 ID=cds-RUP89607.1;Parent=gene-D8M40_04420;Dbxref=NCBI_GP:RUP89607.1;Name=RUP89607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M40_04420;product=hypothetical protein;protein_id=RUP89607.1;transl_table=11 RBME01000003.1 Genbank gene 159358 160362 . - . ID=gene-D8M40_04425;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D8M40_04425 RBME01000003.1 Protein Homology CDS 159358 160362 . - 0 ID=cds-RUP89608.1;Parent=gene-D8M40_04425;Dbxref=NCBI_GP:RUP89608.1;Name=RUP89608.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120308.1;locus_tag=D8M40_04425;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=RUP89608.1;transl_table=11 RBME01000003.1 Genbank gene 160366 160824 . - . ID=gene-D8M40_04430;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D8M40_04430 RBME01000003.1 Protein Homology CDS 160366 160824 . - 0 ID=cds-RUP89609.1;Parent=gene-D8M40_04430;Dbxref=NCBI_GP:RUP89609.1;Name=RUP89609.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120309.1;locus_tag=D8M40_04430;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=RUP89609.1;transl_table=11 RBME01000003.1 Genbank pseudogene 161122 161339 . + . ID=gene-D8M40_04435;Name=D8M40_04435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04435;pseudo=true RBME01000003.1 Protein Homology CDS 161122 161339 . + 0 ID=cds-D8M40_04435;Parent=gene-D8M40_04435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M40_04435;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000003.1 Genbank gene 161511 162212 . - . ID=gene-D8M40_04440;Name=D8M40_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04440 RBME01000003.1 Protein Homology CDS 161511 162212 . - 0 ID=cds-RUP89610.1;Parent=gene-D8M40_04440;Dbxref=NCBI_GP:RUP89610.1;Name=RUP89610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303933.1;locus_tag=D8M40_04440;product=DUF3800 domain-containing protein;protein_id=RUP89610.1;transl_table=11 RBME01000003.1 Genbank gene 162204 162761 . + . ID=gene-D8M40_04445;Name=D8M40_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04445 RBME01000003.1 GeneMarkS+ CDS 162204 162761 . + 0 ID=cds-RUP89611.1;Parent=gene-D8M40_04445;Dbxref=NCBI_GP:RUP89611.1;Name=RUP89611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04445;product=hypothetical protein;protein_id=RUP89611.1;transl_table=11 RBME01000003.1 Genbank gene 163486 164316 . + . ID=gene-D8M40_04450;Name=D8M40_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04450 RBME01000003.1 Protein Homology CDS 163486 164316 . + 0 ID=cds-RUP89629.1;Parent=gene-D8M40_04450;Dbxref=NCBI_GP:RUP89629.1;Name=RUP89629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188257.1;locus_tag=D8M40_04450;product=triacylglycerol lipase;protein_id=RUP89629.1;transl_table=11 RBME01000003.1 Genbank gene 164313 165278 . - . ID=gene-D8M40_04455;Name=D8M40_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04455 RBME01000003.1 Protein Homology CDS 164313 165278 . - 0 ID=cds-RUP89612.1;Parent=gene-D8M40_04455;Dbxref=NCBI_GP:RUP89612.1;Name=RUP89612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120311.1;locus_tag=D8M40_04455;product=NAD-dependent protein deacetylase;protein_id=RUP89612.1;transl_table=11 RBME01000003.1 Genbank gene 165372 165620 . - . ID=gene-D8M40_04460;Name=D8M40_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04460 RBME01000003.1 Protein Homology CDS 165372 165620 . - 0 ID=cds-RUP89630.1;Parent=gene-D8M40_04460;Dbxref=NCBI_GP:RUP89630.1;Name=RUP89630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063830.1;locus_tag=D8M40_04460;product=hypothetical protein;protein_id=RUP89630.1;transl_table=11 RBME01000003.1 Genbank gene 165685 166665 . - . ID=gene-D8M40_04465;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=D8M40_04465 RBME01000003.1 Protein Homology CDS 165685 166665 . - 0 ID=cds-RUP89613.1;Parent=gene-D8M40_04465;Dbxref=NCBI_GP:RUP89613.1;Name=RUP89613.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188252.1;locus_tag=D8M40_04465;product=biotin synthase BioB;protein_id=RUP89613.1;transl_table=11 RBME01000003.1 Genbank gene 166786 167565 . + . ID=gene-D8M40_04470;Name=D8M40_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04470 RBME01000003.1 Protein Homology CDS 166786 167565 . + 0 ID=cds-RUP89614.1;Parent=gene-D8M40_04470;Dbxref=NCBI_GP:RUP89614.1;Name=RUP89614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120314.1;locus_tag=D8M40_04470;product=DUF4442 domain-containing protein;protein_id=RUP89614.1;transl_table=11 RBME01000003.1 Genbank gene 167590 168924 . + . ID=gene-D8M40_04475;Name=D8M40_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04475 RBME01000003.1 Protein Homology CDS 167590 168924 . + 0 ID=cds-RUP89615.1;Parent=gene-D8M40_04475;Dbxref=NCBI_GP:RUP89615.1;Name=RUP89615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120315.1;locus_tag=D8M40_04475;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP89615.1;transl_table=11 RBME01000003.1 Genbank gene 168963 170009 . - . ID=gene-D8M40_04480;Name=D8M40_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04480 RBME01000003.1 Protein Homology CDS 168963 170009 . - 0 ID=cds-RUP89616.1;Parent=gene-D8M40_04480;Dbxref=NCBI_GP:RUP89616.1;Name=RUP89616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120316.1;locus_tag=D8M40_04480;product=iron ABC transporter permease;protein_id=RUP89616.1;transl_table=11 RBME01000003.1 Genbank gene 170012 171181 . - . ID=gene-D8M40_04485;Name=D8M40_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04485 RBME01000003.1 Protein Homology CDS 170012 171181 . - 0 ID=cds-RUP89617.1;Parent=gene-D8M40_04485;Dbxref=NCBI_GP:RUP89617.1;Name=RUP89617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120317.1;locus_tag=D8M40_04485;product=hemin ABC transporter substrate-binding protein;protein_id=RUP89617.1;transl_table=11 RBME01000003.1 Genbank gene 171183 171878 . - . ID=gene-D8M40_04490;Name=D8M40_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04490 RBME01000003.1 Protein Homology CDS 171183 171878 . - 0 ID=cds-RUP89618.1;Parent=gene-D8M40_04490;Dbxref=NCBI_GP:RUP89618.1;Name=RUP89618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120318.1;locus_tag=D8M40_04490;product=biliverdin-producing heme oxygenase;protein_id=RUP89618.1;transl_table=11 ##sequence-region RBME01000040.1 1 1350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000040.1 Genbank region 1 1350 . + . ID=RBME01000040.1:1..1350;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000040.1 Genbank gene 1 1206 . - . ID=gene-D8M40_11385;Name=D8M40_11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11385;partial=true;start_range=.,1 RBME01000040.1 Protein Homology CDS 1 1206 . - 0 ID=cds-RUP86407.1;Parent=gene-D8M40_11385;Dbxref=NCBI_GP:RUP86407.1;Name=RUP86407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017845435.1;locus_tag=D8M40_11385;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP86407.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000041.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000041.1 Genbank region 1 1312 . + . ID=RBME01000041.1:1..1312;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000041.1 Genbank gene 1 1312 . + . ID=gene-D8M40_11390;Name=D8M40_11390;end_range=1312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11390;partial=true;start_range=.,1 RBME01000041.1 Protein Homology CDS 1 1312 . + 1 ID=cds-RUP86404.1;Parent=gene-D8M40_11390;Dbxref=NCBI_GP:RUP86404.1;Name=RUP86404.1;end_range=1312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015634935.1;locus_tag=D8M40_11390;partial=true;product=amino acid adenylation domain-containing protein;protein_id=RUP86404.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000042.1 1 1316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000042.1 Genbank region 1 1316 . + . ID=RBME01000042.1:1..1316;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000042.1 Genbank gene 1 506 . + . ID=gene-D8M40_11395;Name=D8M40_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11395;partial=true;start_range=.,1 RBME01000042.1 Protein Homology CDS 1 506 . + 2 ID=cds-RUP86399.1;Parent=gene-D8M40_11395;Dbxref=NCBI_GP:RUP86399.1;Name=RUP86399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003192879.1;locus_tag=D8M40_11395;partial=true;product=biotin/lipoyl-binding protein;protein_id=RUP86399.1;start_range=.,1;transl_table=11 RBME01000042.1 Genbank gene 604 1146 . + . ID=gene-D8M40_11400;Name=D8M40_11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11400 RBME01000042.1 Protein Homology CDS 604 1146 . + 0 ID=cds-RUP86400.1;Parent=gene-D8M40_11400;Dbxref=NCBI_GP:RUP86400.1;Name=RUP86400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003219774.1;locus_tag=D8M40_11400;product=exonuclease;protein_id=RUP86400.1;transl_table=11 RBME01000042.1 Genbank gene 1210 1316 . + . ID=gene-D8M40_11405;Name=D8M40_11405;end_range=1316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11405;partial=true RBME01000042.1 Protein Homology CDS 1210 1316 . + 0 ID=cds-RUP86401.1;Parent=gene-D8M40_11405;Dbxref=NCBI_GP:RUP86401.1;Name=RUP86401.1;end_range=1316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016492083.1;locus_tag=D8M40_11405;partial=true;product=DUF1255 family protein;protein_id=RUP86401.1;transl_table=11 ##sequence-region RBME01000043.1 1 1313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000043.1 Genbank region 1 1313 . + . ID=RBME01000043.1:1..1313;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000043.1 Genbank gene 1 693 . - . ID=gene-D8M40_11410;Name=D8M40_11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11410;partial=true;start_range=.,1 RBME01000043.1 Protein Homology CDS 1 693 . - 0 ID=cds-RUP86395.1;Parent=gene-D8M40_11410;Dbxref=NCBI_GP:RUP86395.1;Name=RUP86395.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016253964.1;locus_tag=D8M40_11410;partial=true;product=adenylosuccinate synthase;protein_id=RUP86395.1;start_range=.,1;transl_table=11 RBME01000043.1 Genbank gene 748 1313 . - . ID=gene-D8M40_11415;Name=hisZ;end_range=1313,.;gbkey=Gene;gene=hisZ;gene_biotype=protein_coding;locus_tag=D8M40_11415;partial=true RBME01000043.1 Protein Homology CDS 748 1313 . - 2 ID=cds-RUP86396.1;Parent=gene-D8M40_11415;Dbxref=NCBI_GP:RUP86396.1;Name=RUP86396.1;Note=May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine;end_range=1313,.;gbkey=CDS;gene=hisZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233684.1;locus_tag=D8M40_11415;partial=true;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=RUP86396.1;transl_table=11 ##sequence-region RBME01000044.1 1 1301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000044.1 Genbank region 1 1301 . + . ID=RBME01000044.1:1..1301;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000044.1 Genbank gene 1 581 . + . ID=gene-D8M40_11420;Name=D8M40_11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11420;partial=true;start_range=.,1 RBME01000044.1 Protein Homology CDS 1 581 . + 2 ID=cds-RUP86391.1;Parent=gene-D8M40_11420;Dbxref=NCBI_GP:RUP86391.1;Name=RUP86391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016978589.1;locus_tag=D8M40_11420;partial=true;product=lipoyl synthase;protein_id=RUP86391.1;start_range=.,1;transl_table=11 RBME01000044.1 Genbank gene 708 1301 . - . ID=gene-D8M40_11425;Name=D8M40_11425;end_range=1301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11425;partial=true RBME01000044.1 Protein Homology CDS 708 1301 . - 0 ID=cds-RUP86392.1;Parent=gene-D8M40_11425;Dbxref=NCBI_GP:RUP86392.1;Name=RUP86392.1;end_range=1301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008150516.1;locus_tag=D8M40_11425;partial=true;product=phosphoenolpyruvate-protein phosphotransferase PtsP;protein_id=RUP86392.1;transl_table=11 ##sequence-region RBME01000045.1 1 1287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000045.1 Genbank region 1 1287 . + . ID=RBME01000045.1:1..1287;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000045.1 Genbank gene 1 211 . - . ID=gene-D8M40_11430;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D8M40_11430;partial=true;start_range=.,1 RBME01000045.1 Protein Homology CDS 1 211 . - 0 ID=cds-RUP86385.1;Parent=gene-D8M40_11430;Dbxref=NCBI_GP:RUP86385.1;Name=RUP86385.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003437980.1;locus_tag=D8M40_11430;partial=true;product=membrane protein insertion efficiency factor YidD;protein_id=RUP86385.1;start_range=.,1;transl_table=11 RBME01000045.1 Genbank gene 204 677 . - . ID=gene-D8M40_11435;Name=D8M40_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11435 RBME01000045.1 Protein Homology CDS 204 677 . - 0 ID=cds-RUP86386.1;Parent=gene-D8M40_11435;Dbxref=NCBI_GP:RUP86386.1;Name=RUP86386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003233595.1;locus_tag=D8M40_11435;product=ribonuclease P protein component;protein_id=RUP86386.1;transl_table=11 RBME01000045.1 Genbank gene 625 759 . - . ID=gene-D8M40_11440;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=D8M40_11440 RBME01000045.1 Protein Homology CDS 625 759 . - 0 ID=cds-RUP86387.1;Parent=gene-D8M40_11440;Dbxref=NCBI_GP:RUP86387.1;Name=RUP86387.1;gbkey=CDS;gene=rpmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002551315.1;locus_tag=D8M40_11440;product=50S ribosomal protein L34;protein_id=RUP86387.1;transl_table=11 ##sequence-region RBME01000046.1 1 1267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000046.1 Genbank region 1 1267 . + . ID=RBME01000046.1:1..1267;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000046.1 Genbank gene 32 910 . - . ID=gene-D8M40_11445;Name=D8M40_11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11445 RBME01000046.1 Protein Homology CDS 32 910 . - 0 ID=cds-RUP86382.1;Parent=gene-D8M40_11445;Dbxref=NCBI_GP:RUP86382.1;Name=RUP86382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=D8M40_11445;product=IS3 family transposase;protein_id=RUP86382.1;transl_table=11 RBME01000046.1 Genbank gene 904 1194 . - . ID=gene-D8M40_11450;Name=D8M40_11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11450 RBME01000046.1 Protein Homology CDS 904 1194 . - 0 ID=cds-RUP86383.1;Parent=gene-D8M40_11450;Dbxref=NCBI_GP:RUP86383.1;Name=RUP86383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=D8M40_11450;product=hypothetical protein;protein_id=RUP86383.1;transl_table=11 ##sequence-region RBME01000047.1 1 1263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000047.1 Genbank region 1 1263 . + . ID=RBME01000047.1:1..1263;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000047.1 Genbank gene 104 1263 . + . ID=gene-D8M40_11455;Name=D8M40_11455;end_range=1263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11455;partial=true RBME01000047.1 Protein Homology CDS 104 1263 . + 0 ID=cds-RUP86379.1;Parent=gene-D8M40_11455;Dbxref=NCBI_GP:RUP86379.1;Name=RUP86379.1;end_range=1263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020800276.1;locus_tag=D8M40_11455;partial=true;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=RUP86379.1;transl_table=11 ##sequence-region RBME01000048.1 1 1257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000048.1 Genbank region 1 1257 . + . ID=RBME01000048.1:1..1257;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000048.1 Genbank gene 1 401 . - . ID=gene-D8M40_11460;Name=D8M40_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11460;partial=true;start_range=.,1 RBME01000048.1 Protein Homology CDS 1 401 . - 0 ID=cds-RUP86377.1;Parent=gene-D8M40_11460;Dbxref=NCBI_GP:RUP86377.1;Name=RUP86377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003195206.1;locus_tag=D8M40_11460;partial=true;product=DNA-binding protein;protein_id=RUP86377.1;start_range=.,1;transl_table=11 RBME01000048.1 Genbank gene 410 1257 . - . ID=gene-D8M40_11465;Name=D8M40_11465;end_range=1257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11465;partial=true RBME01000048.1 Protein Homology CDS 410 1257 . - 2 ID=cds-RUP86378.1;Parent=gene-D8M40_11465;Dbxref=NCBI_GP:RUP86378.1;Name=RUP86378.1;end_range=1257,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015886399.1;locus_tag=D8M40_11465;partial=true;product=DNA-binding protein;protein_id=RUP86378.1;transl_table=11 ##sequence-region RBME01000049.1 1 1255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000049.1 Genbank region 1 1255 . + . ID=RBME01000049.1:1..1255;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000049.1 Genbank gene 186 530 . + . ID=gene-D8M40_11470;Name=D8M40_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11470 RBME01000049.1 Protein Homology CDS 186 530 . + 0 ID=cds-RUP86374.1;Parent=gene-D8M40_11470;Dbxref=NCBI_GP:RUP86374.1;Name=RUP86374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005788737.1;locus_tag=D8M40_11470;product=hypothetical protein;protein_id=RUP86374.1;transl_table=11 RBME01000049.1 Genbank gene 591 827 . - . ID=gene-D8M40_11475;Name=D8M40_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11475 RBME01000049.1 Protein Homology CDS 591 827 . - 0 ID=cds-RUP86372.1;Parent=gene-D8M40_11475;Dbxref=NCBI_GP:RUP86372.1;Name=RUP86372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017136925.1;locus_tag=D8M40_11475;product=hypothetical protein;protein_id=RUP86372.1;transl_table=11 RBME01000049.1 Genbank gene 1064 1255 . + . ID=gene-D8M40_11480;Name=D8M40_11480;end_range=1255,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11480;partial=true RBME01000049.1 Protein Homology CDS 1064 1255 . + 0 ID=cds-RUP86373.1;Parent=gene-D8M40_11480;Dbxref=NCBI_GP:RUP86373.1;Name=RUP86373.1;end_range=1255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008431334.1;locus_tag=D8M40_11480;partial=true;product=ACP phosphodiesterase;protein_id=RUP86373.1;transl_table=11 ##sequence-region RBME01000004.1 1 162920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000004.1 Genbank region 1 162920 . + . ID=RBME01000004.1:1..162920;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000004.1 Genbank pseudogene 129 1085 . - . ID=gene-D8M40_04495;Name=D8M40_04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04495;pseudo=true RBME01000004.1 Protein Homology CDS 129 1085 . - 0 ID=cds-D8M40_04495;Parent=gene-D8M40_04495;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121479.1;locus_tag=D8M40_04495;product=MFS transporter;pseudo=true;transl_table=11 RBME01000004.1 Genbank gene 1197 2540 . + . ID=gene-D8M40_04500;Name=D8M40_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04500 RBME01000004.1 Protein Homology CDS 1197 2540 . + 0 ID=cds-RUP89342.1;Parent=gene-D8M40_04500;Dbxref=NCBI_GP:RUP89342.1;Name=RUP89342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189502.1;locus_tag=D8M40_04500;product=phosphoglucosamine mutase;protein_id=RUP89342.1;transl_table=11 RBME01000004.1 Genbank gene 2744 3055 . + . ID=gene-D8M40_04505;Name=D8M40_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04505 RBME01000004.1 GeneMarkS+ CDS 2744 3055 . + 0 ID=cds-RUP89343.1;Parent=gene-D8M40_04505;Dbxref=NCBI_GP:RUP89343.1;Name=RUP89343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04505;product=hypothetical protein;protein_id=RUP89343.1;transl_table=11 RBME01000004.1 Genbank gene 3055 4746 . + . ID=gene-D8M40_04510;Name=D8M40_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04510 RBME01000004.1 GeneMarkS+ CDS 3055 4746 . + 0 ID=cds-RUP89344.1;Parent=gene-D8M40_04510;Dbxref=NCBI_GP:RUP89344.1;Name=RUP89344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04510;product=hypothetical protein;protein_id=RUP89344.1;transl_table=11 RBME01000004.1 Genbank pseudogene 4740 4967 . + . ID=gene-D8M40_04515;Name=D8M40_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04515;pseudo=true RBME01000004.1 Protein Homology CDS 4740 4967 . + 0 ID=cds-D8M40_04515;Parent=gene-D8M40_04515;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322739.1;locus_tag=D8M40_04515;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000004.1 Genbank gene 5096 5935 . - . ID=gene-D8M40_04520;Name=D8M40_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04520 RBME01000004.1 Protein Homology CDS 5096 5935 . - 0 ID=cds-RUP89345.1;Parent=gene-D8M40_04520;Dbxref=NCBI_GP:RUP89345.1;Name=RUP89345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018754.1;locus_tag=D8M40_04520;product=alpha/beta hydrolase;protein_id=RUP89345.1;transl_table=11 RBME01000004.1 Genbank gene 6036 7907 . + . ID=gene-D8M40_04525;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=D8M40_04525 RBME01000004.1 Protein Homology CDS 6036 7907 . + 0 ID=cds-RUP89346.1;Parent=gene-D8M40_04525;Dbxref=NCBI_GP:RUP89346.1;Name=RUP89346.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601471.2;locus_tag=D8M40_04525;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=RUP89346.1;transl_table=11 RBME01000004.1 Genbank gene 8001 9113 . + . ID=gene-D8M40_04530;Name=D8M40_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04530 RBME01000004.1 Protein Homology CDS 8001 9113 . + 0 ID=cds-RUP89347.1;Parent=gene-D8M40_04530;Dbxref=NCBI_GP:RUP89347.1;Name=RUP89347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823276.1;locus_tag=D8M40_04530;product=alanine racemase;protein_id=RUP89347.1;transl_table=11 RBME01000004.1 Genbank gene 9152 9634 . + . ID=gene-D8M40_04535;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=D8M40_04535 RBME01000004.1 Protein Homology CDS 9152 9634 . + 0 ID=cds-RUP89459.1;Parent=gene-D8M40_04535;Dbxref=NCBI_GP:RUP89459.1;Name=RUP89459.1;gbkey=CDS;gene=tsaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848207.1;locus_tag=D8M40_04535;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=RUP89459.1;transl_table=11 RBME01000004.1 Genbank gene 9786 10256 . + . ID=gene-D8M40_04540;Name=D8M40_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04540 RBME01000004.1 GeneMarkS+ CDS 9786 10256 . + 0 ID=cds-RUP89348.1;Parent=gene-D8M40_04540;Dbxref=NCBI_GP:RUP89348.1;Name=RUP89348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04540;product=hypothetical protein;protein_id=RUP89348.1;transl_table=11 RBME01000004.1 Genbank gene 10259 11035 . + . ID=gene-D8M40_04545;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=D8M40_04545 RBME01000004.1 Protein Homology CDS 10259 11035 . + 0 ID=cds-RUP89349.1;Parent=gene-D8M40_04545;Dbxref=NCBI_GP:RUP89349.1;Name=RUP89349.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014523809.1;locus_tag=D8M40_04545;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=RUP89349.1;transl_table=11 RBME01000004.1 Genbank gene 11071 11562 . + . ID=gene-D8M40_04550;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D8M40_04550 RBME01000004.1 Protein Homology CDS 11071 11562 . + 0 ID=cds-RUP89460.1;Parent=gene-D8M40_04550;Dbxref=NCBI_GP:RUP89460.1;Name=RUP89460.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848203.1;locus_tag=D8M40_04550;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=RUP89460.1;transl_table=11 RBME01000004.1 Genbank gene 11572 12672 . + . ID=gene-D8M40_04555;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=D8M40_04555 RBME01000004.1 Protein Homology CDS 11572 12672 . + 0 ID=cds-RUP89350.1;Parent=gene-D8M40_04555;Dbxref=NCBI_GP:RUP89350.1;Name=RUP89350.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277172.1;locus_tag=D8M40_04555;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=RUP89350.1;transl_table=11 RBME01000004.1 Genbank gene 12882 13181 . + . ID=gene-D8M40_04560;Name=D8M40_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04560 RBME01000004.1 Protein Homology CDS 12882 13181 . + 0 ID=cds-RUP89461.1;Parent=gene-D8M40_04560;Dbxref=NCBI_GP:RUP89461.1;Name=RUP89461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297709.1;locus_tag=D8M40_04560;product=co-chaperone GroES;protein_id=RUP89461.1;transl_table=11 RBME01000004.1 Genbank gene 13198 14820 . + . ID=gene-D8M40_04565;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D8M40_04565 RBME01000004.1 Protein Homology CDS 13198 14820 . + 0 ID=cds-RUP89351.1;Parent=gene-D8M40_04565;Dbxref=NCBI_GP:RUP89351.1;Name=RUP89351.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823284.1;locus_tag=D8M40_04565;product=chaperonin GroEL;protein_id=RUP89351.1;transl_table=11 RBME01000004.1 Genbank gene 15204 15773 . + . ID=gene-D8M40_04570;Name=D8M40_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04570 RBME01000004.1 Protein Homology CDS 15204 15773 . + 0 ID=cds-RUP89462.1;Parent=gene-D8M40_04570;Dbxref=NCBI_GP:RUP89462.1;Name=RUP89462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400027.1;locus_tag=D8M40_04570;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP89462.1;transl_table=11 RBME01000004.1 Genbank gene 15770 16783 . + . ID=gene-D8M40_04575;Name=D8M40_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04575 RBME01000004.1 GeneMarkS+ CDS 15770 16783 . + 0 ID=cds-RUP89352.1;Parent=gene-D8M40_04575;Dbxref=NCBI_GP:RUP89352.1;Name=RUP89352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04575;product=hypothetical protein;protein_id=RUP89352.1;transl_table=11 RBME01000004.1 Genbank gene 16899 17288 . - . ID=gene-D8M40_04580;Name=D8M40_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04580 RBME01000004.1 Protein Homology CDS 16899 17288 . - 0 ID=cds-RUP89463.1;Parent=gene-D8M40_04580;Dbxref=NCBI_GP:RUP89463.1;Name=RUP89463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599838.1;locus_tag=D8M40_04580;product=hypothetical protein;protein_id=RUP89463.1;transl_table=11 RBME01000004.1 Genbank gene 17468 18985 . + . ID=gene-D8M40_04585;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=D8M40_04585 RBME01000004.1 Protein Homology CDS 17468 18985 . + 0 ID=cds-RUP89353.1;Parent=gene-D8M40_04585;Dbxref=NCBI_GP:RUP89353.1;Name=RUP89353.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277200.1;locus_tag=D8M40_04585;product=IMP dehydrogenase;protein_id=RUP89353.1;transl_table=11 RBME01000004.1 Genbank gene 19040 20200 . + . ID=gene-D8M40_04590;Name=D8M40_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04590 RBME01000004.1 Protein Homology CDS 19040 20200 . + 0 ID=cds-RUP89354.1;Parent=gene-D8M40_04590;Dbxref=NCBI_GP:RUP89354.1;Name=RUP89354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599840.1;locus_tag=D8M40_04590;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=RUP89354.1;transl_table=11 RBME01000004.1 Genbank gene 20239 21168 . - . ID=gene-D8M40_04595;Name=D8M40_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04595 RBME01000004.1 Protein Homology CDS 20239 21168 . - 0 ID=cds-RUP89464.1;Parent=gene-D8M40_04595;Dbxref=NCBI_GP:RUP89464.1;Name=RUP89464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189458.1;locus_tag=D8M40_04595;product=EamA family transporter;protein_id=RUP89464.1;transl_table=11 RBME01000004.1 Genbank gene 21320 22894 . + . ID=gene-D8M40_04600;Name=D8M40_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04600 RBME01000004.1 Protein Homology CDS 21320 22894 . + 0 ID=cds-RUP89355.1;Parent=gene-D8M40_04600;Dbxref=NCBI_GP:RUP89355.1;Name=RUP89355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823296.1;locus_tag=D8M40_04600;product=glutamine-hydrolyzing GMP synthase;protein_id=RUP89355.1;transl_table=11 RBME01000004.1 Genbank gene 23577 24404 . + . ID=gene-D8M40_04605;Name=D8M40_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04605 RBME01000004.1 GeneMarkS+ CDS 23577 24404 . + 0 ID=cds-RUP89356.1;Parent=gene-D8M40_04605;Dbxref=NCBI_GP:RUP89356.1;Name=RUP89356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04605;product=hypothetical protein;protein_id=RUP89356.1;transl_table=11 RBME01000004.1 Genbank gene 24405 26093 . + . ID=gene-D8M40_04610;Name=D8M40_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04610 RBME01000004.1 Protein Homology CDS 24405 26093 . + 0 ID=cds-RUP89357.1;Parent=gene-D8M40_04610;Dbxref=NCBI_GP:RUP89357.1;Name=RUP89357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121504.1;locus_tag=D8M40_04610;product=DNA polymerase Y family protein;protein_id=RUP89357.1;transl_table=11 RBME01000004.1 Genbank gene 26106 26939 . - . ID=gene-D8M40_04615;Name=D8M40_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04615 RBME01000004.1 GeneMarkS+ CDS 26106 26939 . - 0 ID=cds-RUP89358.1;Parent=gene-D8M40_04615;Dbxref=NCBI_GP:RUP89358.1;Name=RUP89358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04615;product=hypothetical protein;protein_id=RUP89358.1;transl_table=11 RBME01000004.1 Genbank gene 27095 28126 . + . ID=gene-D8M40_04620;Name=D8M40_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04620 RBME01000004.1 Protein Homology CDS 27095 28126 . + 0 ID=cds-RUP89359.1;Parent=gene-D8M40_04620;Dbxref=NCBI_GP:RUP89359.1;Name=RUP89359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400042.1;locus_tag=D8M40_04620;product=sucrase ferredoxin;protein_id=RUP89359.1;transl_table=11 RBME01000004.1 Genbank gene 28174 29220 . - . ID=gene-D8M40_04625;Name=D8M40_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04625 RBME01000004.1 Protein Homology CDS 28174 29220 . - 0 ID=cds-RUP89360.1;Parent=gene-D8M40_04625;Dbxref=NCBI_GP:RUP89360.1;Name=RUP89360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840767.1;locus_tag=D8M40_04625;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP89360.1;transl_table=11 RBME01000004.1 Genbank gene 29281 29628 . - . ID=gene-D8M40_04630;Name=D8M40_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04630 RBME01000004.1 Protein Homology CDS 29281 29628 . - 0 ID=cds-RUP89361.1;Parent=gene-D8M40_04630;Dbxref=NCBI_GP:RUP89361.1;Name=RUP89361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011265756.1;locus_tag=D8M40_04630;product=transcriptional regulator;protein_id=RUP89361.1;transl_table=11 RBME01000004.1 Genbank gene 29732 30829 . + . ID=gene-D8M40_04635;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=D8M40_04635 RBME01000004.1 Protein Homology CDS 29732 30829 . + 0 ID=cds-RUP89362.1;Parent=gene-D8M40_04635;Dbxref=NCBI_GP:RUP89362.1;Name=RUP89362.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849980.1;locus_tag=D8M40_04635;product=arsenical-resistance protein;protein_id=RUP89362.1;transl_table=11 RBME01000004.1 Genbank gene 30980 31654 . - . ID=gene-D8M40_04640;Name=D8M40_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04640 RBME01000004.1 Protein Homology CDS 30980 31654 . - 0 ID=cds-RUP89363.1;Parent=gene-D8M40_04640;Dbxref=NCBI_GP:RUP89363.1;Name=RUP89363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004566952.1;locus_tag=D8M40_04640;product=ABC transporter permease;protein_id=RUP89363.1;transl_table=11 RBME01000004.1 Genbank gene 31651 32727 . - . ID=gene-D8M40_04645;Name=D8M40_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04645 RBME01000004.1 Protein Homology CDS 31651 32727 . - 0 ID=cds-RUP89364.1;Parent=gene-D8M40_04645;Dbxref=NCBI_GP:RUP89364.1;Name=RUP89364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004601098.1;locus_tag=D8M40_04645;product=methionine ABC transporter ATP-binding protein;protein_id=RUP89364.1;transl_table=11 RBME01000004.1 Genbank gene 32902 33789 . - . ID=gene-D8M40_04650;Name=D8M40_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04650 RBME01000004.1 Protein Homology CDS 32902 33789 . - 0 ID=cds-RUP89365.1;Parent=gene-D8M40_04650;Dbxref=NCBI_GP:RUP89365.1;Name=RUP89365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400049.1;locus_tag=D8M40_04650;product=methionine ABC transporter substrate-binding protein;protein_id=RUP89365.1;transl_table=11 RBME01000004.1 Genbank gene 34017 37187 . + . ID=gene-D8M40_04655;Name=D8M40_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04655 RBME01000004.1 Protein Homology CDS 34017 37187 . + 0 ID=cds-RUP89366.1;Parent=gene-D8M40_04655;Dbxref=NCBI_GP:RUP89366.1;Name=RUP89366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322664.1;locus_tag=D8M40_04655;product=error-prone DNA polymerase;protein_id=RUP89366.1;transl_table=11 RBME01000004.1 Genbank gene 37239 38273 . - . ID=gene-D8M40_04660;Name=D8M40_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04660 RBME01000004.1 Protein Homology CDS 37239 38273 . - 0 ID=cds-RUP89367.1;Parent=gene-D8M40_04660;Dbxref=NCBI_GP:RUP89367.1;Name=RUP89367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822836.1;locus_tag=D8M40_04660;product=ABC transporter substrate-binding protein;protein_id=RUP89367.1;transl_table=11 RBME01000004.1 Genbank gene 38317 39753 . - . ID=gene-D8M40_04665;Name=D8M40_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04665 RBME01000004.1 Protein Homology CDS 38317 39753 . - 0 ID=cds-RUP89368.1;Parent=gene-D8M40_04665;Dbxref=NCBI_GP:RUP89368.1;Name=RUP89368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062958.1;locus_tag=D8M40_04665;product=aldehyde dehydrogenase;protein_id=RUP89368.1;transl_table=11 RBME01000004.1 Genbank gene 39801 40685 . - . ID=gene-D8M40_04670;Name=D8M40_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04670 RBME01000004.1 Protein Homology CDS 39801 40685 . - 0 ID=cds-RUP89369.1;Parent=gene-D8M40_04670;Dbxref=NCBI_GP:RUP89369.1;Name=RUP89369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848808.1;locus_tag=D8M40_04670;product=dihydrodipicolinate synthase family protein;protein_id=RUP89369.1;transl_table=11 RBME01000004.1 Genbank gene 40686 41501 . - . ID=gene-D8M40_04675;Name=D8M40_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04675 RBME01000004.1 Protein Homology CDS 40686 41501 . - 0 ID=cds-RUP89370.1;Parent=gene-D8M40_04675;Dbxref=NCBI_GP:RUP89370.1;Name=RUP89370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04909.12;locus_tag=D8M40_04675;product=hypothetical protein;protein_id=RUP89370.1;transl_table=11 RBME01000004.1 Genbank gene 41587 42372 . - . ID=gene-D8M40_04680;Name=D8M40_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04680 RBME01000004.1 Protein Homology CDS 41587 42372 . - 0 ID=cds-RUP89371.1;Parent=gene-D8M40_04680;Dbxref=NCBI_GP:RUP89371.1;Name=RUP89371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121517.1;locus_tag=D8M40_04680;product=SDR family oxidoreductase;protein_id=RUP89371.1;transl_table=11 RBME01000004.1 Genbank gene 42478 43251 . - . ID=gene-D8M40_04685;Name=D8M40_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04685 RBME01000004.1 Protein Homology CDS 42478 43251 . - 0 ID=cds-RUP89372.1;Parent=gene-D8M40_04685;Dbxref=NCBI_GP:RUP89372.1;Name=RUP89372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016442577.1;locus_tag=D8M40_04685;product=IclR family transcriptional regulator;protein_id=RUP89372.1;transl_table=11 RBME01000004.1 Genbank gene 43528 44817 . + . ID=gene-D8M40_04690;Name=D8M40_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04690 RBME01000004.1 Protein Homology CDS 43528 44817 . + 0 ID=cds-RUP89373.1;Parent=gene-D8M40_04690;Dbxref=NCBI_GP:RUP89373.1;Name=RUP89373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003985800.1;locus_tag=D8M40_04690;product=fuconate dehydratase;protein_id=RUP89373.1;transl_table=11 RBME01000004.1 Genbank gene 44874 46256 . + . ID=gene-D8M40_04695;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=D8M40_04695 RBME01000004.1 Protein Homology CDS 44874 46256 . + 0 ID=cds-RUP89374.1;Parent=gene-D8M40_04695;Dbxref=NCBI_GP:RUP89374.1;Name=RUP89374.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011505672.1;locus_tag=D8M40_04695;product=L-fucose:H+ symporter permease;protein_id=RUP89374.1;transl_table=11 RBME01000004.1 Genbank gene 46260 46685 . + . ID=gene-D8M40_04700;Name=D8M40_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04700 RBME01000004.1 Protein Homology CDS 46260 46685 . + 0 ID=cds-RUP89375.1;Parent=gene-D8M40_04700;Dbxref=NCBI_GP:RUP89375.1;Name=RUP89375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121521.1;locus_tag=D8M40_04700;product=fucose isomerase;protein_id=RUP89375.1;transl_table=11 RBME01000004.1 Genbank gene 46739 47392 . + . ID=gene-D8M40_04705;Name=D8M40_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04705 RBME01000004.1 Protein Homology CDS 46739 47392 . + 0 ID=cds-RUP89465.1;Parent=gene-D8M40_04705;Dbxref=NCBI_GP:RUP89465.1;Name=RUP89465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121522.1;locus_tag=D8M40_04705;product=DUF159 family protein;protein_id=RUP89465.1;transl_table=11 RBME01000004.1 Genbank gene 47421 48701 . - . ID=gene-D8M40_04710;Name=D8M40_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04710 RBME01000004.1 Protein Homology CDS 47421 48701 . - 0 ID=cds-RUP89376.1;Parent=gene-D8M40_04710;Dbxref=NCBI_GP:RUP89376.1;Name=RUP89376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121523.1;locus_tag=D8M40_04710;product=Zn-dependent hydrolase;protein_id=RUP89376.1;transl_table=11 RBME01000004.1 Genbank gene 48701 49741 . - . ID=gene-D8M40_04715;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D8M40_04715 RBME01000004.1 Protein Homology CDS 48701 49741 . - 0 ID=cds-RUP89377.1;Parent=gene-D8M40_04715;Dbxref=NCBI_GP:RUP89377.1;Name=RUP89377.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121524.1;locus_tag=D8M40_04715;product=histidinol-phosphate transaminase;protein_id=RUP89377.1;transl_table=11 RBME01000004.1 Genbank gene 49842 51161 . - . ID=gene-D8M40_04720;Name=D8M40_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04720 RBME01000004.1 Protein Homology CDS 49842 51161 . - 0 ID=cds-RUP89378.1;Parent=gene-D8M40_04720;Dbxref=NCBI_GP:RUP89378.1;Name=RUP89378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121525.1;locus_tag=D8M40_04720;product=septum formation initiator;protein_id=RUP89378.1;transl_table=11 RBME01000004.1 Genbank gene 51242 52987 . - . ID=gene-D8M40_04725;Name=D8M40_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04725 RBME01000004.1 Protein Homology CDS 51242 52987 . - 0 ID=cds-RUP89379.1;Parent=gene-D8M40_04725;Dbxref=NCBI_GP:RUP89379.1;Name=RUP89379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121526.1;locus_tag=D8M40_04725;product=acetolactate synthase;protein_id=RUP89379.1;transl_table=11 RBME01000004.1 Genbank gene 53221 54315 . + . ID=gene-D8M40_04730;Name=D8M40_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04730 RBME01000004.1 Protein Homology CDS 53221 54315 . + 0 ID=cds-RUP89466.1;Parent=gene-D8M40_04730;Dbxref=NCBI_GP:RUP89466.1;Name=RUP89466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011273476.1;locus_tag=D8M40_04730;product=glycerophosphodiester phosphodiesterase;protein_id=RUP89466.1;transl_table=11 RBME01000004.1 Genbank gene 54322 54876 . - . ID=gene-D8M40_04735;Name=D8M40_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04735 RBME01000004.1 GeneMarkS+ CDS 54322 54876 . - 0 ID=cds-RUP89380.1;Parent=gene-D8M40_04735;Dbxref=NCBI_GP:RUP89380.1;Name=RUP89380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04735;product=hypothetical protein;protein_id=RUP89380.1;transl_table=11 RBME01000004.1 Genbank gene 54992 55297 . - . ID=gene-D8M40_04740;Name=D8M40_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04740 RBME01000004.1 GeneMarkS+ CDS 54992 55297 . - 0 ID=cds-RUP89381.1;Parent=gene-D8M40_04740;Dbxref=NCBI_GP:RUP89381.1;Name=RUP89381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04740;product=hypothetical protein;protein_id=RUP89381.1;transl_table=11 RBME01000004.1 Genbank gene 55432 56487 . + . ID=gene-D8M40_04745;Name=D8M40_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04745 RBME01000004.1 Protein Homology CDS 55432 56487 . + 0 ID=cds-RUP89382.1;Parent=gene-D8M40_04745;Dbxref=NCBI_GP:RUP89382.1;Name=RUP89382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324354.1;locus_tag=D8M40_04745;product=trimeric intracellular cation channel family protein;protein_id=RUP89382.1;transl_table=11 RBME01000004.1 Genbank gene 56645 57007 . + . ID=gene-D8M40_04750;Name=D8M40_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04750 RBME01000004.1 Protein Homology CDS 56645 57007 . + 0 ID=cds-RUP89383.1;Parent=gene-D8M40_04750;Dbxref=NCBI_GP:RUP89383.1;Name=RUP89383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00903.23;locus_tag=D8M40_04750;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=RUP89383.1;transl_table=11 RBME01000004.1 Genbank gene 56884 58230 . + . ID=gene-D8M40_04755;Name=D8M40_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04755 RBME01000004.1 Protein Homology CDS 56884 58230 . + 0 ID=cds-RUP89384.1;Parent=gene-D8M40_04755;Dbxref=NCBI_GP:RUP89384.1;Name=RUP89384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05977.11;locus_tag=D8M40_04755;product=MFS transporter;protein_id=RUP89384.1;transl_table=11 RBME01000004.1 Genbank gene 58473 59810 . + . ID=gene-D8M40_04760;Name=D8M40_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04760 RBME01000004.1 Protein Homology CDS 58473 59810 . + 0 ID=cds-RUP89385.1;Parent=gene-D8M40_04760;Dbxref=NCBI_GP:RUP89385.1;Name=RUP89385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121531.1;locus_tag=D8M40_04760;product=MFS transporter;protein_id=RUP89385.1;transl_table=11 RBME01000004.1 Genbank gene 59880 61523 . + . ID=gene-D8M40_04765;Name=D8M40_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04765 RBME01000004.1 Protein Homology CDS 59880 61523 . + 0 ID=cds-RUP89386.1;Parent=gene-D8M40_04765;Dbxref=NCBI_GP:RUP89386.1;Name=RUP89386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121532.1;locus_tag=D8M40_04765;product=amidohydrolase;protein_id=RUP89386.1;transl_table=11 RBME01000004.1 Genbank gene 61756 63081 . - . ID=gene-D8M40_04770;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=D8M40_04770 RBME01000004.1 Protein Homology CDS 61756 63081 . - 0 ID=cds-RUP89467.1;Parent=gene-D8M40_04770;Dbxref=NCBI_GP:RUP89467.1;Name=RUP89467.1;gbkey=CDS;gene=gabT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189233.1;locus_tag=D8M40_04770;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=RUP89467.1;transl_table=11 RBME01000004.1 Genbank gene 63211 64746 . + . ID=gene-D8M40_04775;Name=D8M40_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04775 RBME01000004.1 Protein Homology CDS 63211 64746 . + 0 ID=cds-RUP89387.1;Parent=gene-D8M40_04775;Dbxref=NCBI_GP:RUP89387.1;Name=RUP89387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07905.9;locus_tag=D8M40_04775;product=PucR family transcriptional regulator;protein_id=RUP89387.1;transl_table=11 RBME01000004.1 Genbank gene 64864 66456 . - . ID=gene-D8M40_04780;Name=D8M40_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04780 RBME01000004.1 Protein Homology CDS 64864 66456 . - 0 ID=cds-RUP89388.1;Parent=gene-D8M40_04780;Dbxref=NCBI_GP:RUP89388.1;Name=RUP89388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03372.21;locus_tag=D8M40_04780;product=HAD family hydrolase;protein_id=RUP89388.1;transl_table=11 RBME01000004.1 Genbank gene 66458 67549 . - . ID=gene-D8M40_04785;Name=D8M40_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04785 RBME01000004.1 Protein Homology CDS 66458 67549 . - 0 ID=cds-RUP89389.1;Parent=gene-D8M40_04785;Dbxref=NCBI_GP:RUP89389.1;Name=RUP89389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010523770.1;locus_tag=D8M40_04785;product=ABC transporter ATP-binding protein;protein_id=RUP89389.1;transl_table=11 RBME01000004.1 Genbank gene 67515 68501 . - . ID=gene-D8M40_04790;Name=D8M40_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04790 RBME01000004.1 Protein Homology CDS 67515 68501 . - 0 ID=cds-RUP89390.1;Parent=gene-D8M40_04790;Dbxref=NCBI_GP:RUP89390.1;Name=RUP89390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600051.1;locus_tag=D8M40_04790;product=ABC transporter permease subunit;protein_id=RUP89390.1;transl_table=11 RBME01000004.1 Genbank gene 68489 69397 . - . ID=gene-D8M40_04795;Name=D8M40_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04795 RBME01000004.1 Protein Homology CDS 68489 69397 . - 0 ID=cds-RUP89391.1;Parent=gene-D8M40_04795;Dbxref=NCBI_GP:RUP89391.1;Name=RUP89391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010523772.1;locus_tag=D8M40_04795;product=spermidine/putrescine ABC transporter permease;protein_id=RUP89391.1;transl_table=11 RBME01000004.1 Genbank gene 69401 70552 . - . ID=gene-D8M40_04800;Name=D8M40_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04800 RBME01000004.1 Protein Homology CDS 69401 70552 . - 0 ID=cds-RUP89392.1;Parent=gene-D8M40_04800;Dbxref=NCBI_GP:RUP89392.1;Name=RUP89392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600053.1;locus_tag=D8M40_04800;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP89392.1;transl_table=11 RBME01000004.1 Genbank gene 70710 71471 . - . ID=gene-D8M40_04805;Name=D8M40_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04805 RBME01000004.1 Protein Homology CDS 70710 71471 . - 0 ID=cds-RUP89393.1;Parent=gene-D8M40_04805;Dbxref=NCBI_GP:RUP89393.1;Name=RUP89393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822101.1;locus_tag=D8M40_04805;product=GntR family transcriptional regulator;protein_id=RUP89393.1;transl_table=11 RBME01000004.1 Genbank gene 71613 73010 . - . ID=gene-D8M40_04810;Name=D8M40_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04810 RBME01000004.1 Protein Homology CDS 71613 73010 . - 0 ID=cds-RUP89394.1;Parent=gene-D8M40_04810;Dbxref=NCBI_GP:RUP89394.1;Name=RUP89394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017793506.1;locus_tag=D8M40_04810;product=amino acid permease;protein_id=RUP89394.1;transl_table=11 RBME01000004.1 Genbank pseudogene 73579 73866 . + . ID=gene-D8M40_04815;Name=D8M40_04815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04815;pseudo=true RBME01000004.1 Protein Homology CDS 73579 73866 . + 0 ID=cds-D8M40_04815;Parent=gene-D8M40_04815;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388703.1;locus_tag=D8M40_04815;product=Abi family protein;pseudo=true;transl_table=11 RBME01000004.1 Genbank gene 73887 74687 . - . ID=gene-D8M40_04820;Name=D8M40_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04820 RBME01000004.1 GeneMarkS+ CDS 73887 74687 . - 0 ID=cds-RUP89395.1;Parent=gene-D8M40_04820;Dbxref=NCBI_GP:RUP89395.1;Name=RUP89395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04820;product=hypothetical protein;protein_id=RUP89395.1;transl_table=11 RBME01000004.1 Genbank gene 75103 75363 . - . ID=gene-D8M40_04825;Name=D8M40_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04825 RBME01000004.1 Protein Homology CDS 75103 75363 . - 0 ID=cds-RUP89468.1;Parent=gene-D8M40_04825;Dbxref=NCBI_GP:RUP89468.1;Name=RUP89468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277286.1;locus_tag=D8M40_04825;product=hypothetical protein;protein_id=RUP89468.1;transl_table=11 RBME01000004.1 Genbank gene 75552 78113 . + . ID=gene-D8M40_04830;Name=D8M40_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04830 RBME01000004.1 Protein Homology CDS 75552 78113 . + 0 ID=cds-RUP89396.1;Parent=gene-D8M40_04830;Dbxref=NCBI_GP:RUP89396.1;Name=RUP89396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121400.1;locus_tag=D8M40_04830;product=nitric-oxide reductase large subunit;protein_id=RUP89396.1;transl_table=11 RBME01000004.1 Genbank pseudogene 78117 78719 . + . ID=gene-D8M40_04835;Name=D8M40_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04835;pseudo=true RBME01000004.1 Protein Homology CDS 78117 78719 . + 0 ID=cds-D8M40_04835;Parent=gene-D8M40_04835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281483.1;locus_tag=D8M40_04835;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000004.1 Genbank pseudogene 78909 79646 . + . ID=gene-D8M40_04840;Name=D8M40_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_04840;pseudo=true RBME01000004.1 Protein Homology CDS 78909 79646 . + 0 ID=cds-D8M40_04840;Parent=gene-D8M40_04840;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014385565.1;locus_tag=D8M40_04840;product=slipin family protein;pseudo=true;transl_table=11 RBME01000004.1 Genbank gene 80070 80504 . - . ID=gene-D8M40_04845;Name=D8M40_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04845 RBME01000004.1 Protein Homology CDS 80070 80504 . - 0 ID=cds-RUP89469.1;Parent=gene-D8M40_04845;Dbxref=NCBI_GP:RUP89469.1;Name=RUP89469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600184.1;locus_tag=D8M40_04845;product=hypothetical protein;protein_id=RUP89469.1;transl_table=11 RBME01000004.1 Genbank gene 80681 81289 . + . ID=gene-D8M40_04850;Name=D8M40_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04850 RBME01000004.1 GeneMarkS+ CDS 80681 81289 . + 0 ID=cds-RUP89397.1;Parent=gene-D8M40_04850;Dbxref=NCBI_GP:RUP89397.1;Name=RUP89397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04850;product=hypothetical protein;protein_id=RUP89397.1;transl_table=11 RBME01000004.1 Genbank gene 81403 82386 . + . ID=gene-D8M40_04855;Name=D8M40_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04855 RBME01000004.1 Protein Homology CDS 81403 82386 . + 0 ID=cds-RUP89398.1;Parent=gene-D8M40_04855;Dbxref=NCBI_GP:RUP89398.1;Name=RUP89398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822140.1;locus_tag=D8M40_04855;product=ABC transporter substrate-binding protein;protein_id=RUP89398.1;transl_table=11 RBME01000004.1 Genbank gene 82399 83397 . + . ID=gene-D8M40_04860;Name=D8M40_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04860 RBME01000004.1 Protein Homology CDS 82399 83397 . + 0 ID=cds-RUP89399.1;Parent=gene-D8M40_04860;Dbxref=NCBI_GP:RUP89399.1;Name=RUP89399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121406.1;locus_tag=D8M40_04860;product=Fe(3+)-siderophore ABC transporter permease;protein_id=RUP89399.1;transl_table=11 RBME01000004.1 Genbank gene 83387 84562 . + . ID=gene-D8M40_04865;Name=D8M40_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04865 RBME01000004.1 Protein Homology CDS 83387 84562 . + 0 ID=cds-RUP89400.1;Parent=gene-D8M40_04865;Dbxref=NCBI_GP:RUP89400.1;Name=RUP89400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822138.1;locus_tag=D8M40_04865;product=iron-enterobactin ABC transporter permease;protein_id=RUP89400.1;transl_table=11 RBME01000004.1 Genbank gene 84559 85344 . + . ID=gene-D8M40_04870;Name=D8M40_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04870 RBME01000004.1 Protein Homology CDS 84559 85344 . + 0 ID=cds-RUP89401.1;Parent=gene-D8M40_04870;Dbxref=NCBI_GP:RUP89401.1;Name=RUP89401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019744682.1;locus_tag=D8M40_04870;product=ABC transporter ATP-binding protein;protein_id=RUP89401.1;transl_table=11 RBME01000004.1 Genbank gene 85409 85858 . + . ID=gene-D8M40_04875;Name=D8M40_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04875 RBME01000004.1 Protein Homology CDS 85409 85858 . + 0 ID=cds-RUP89402.1;Parent=gene-D8M40_04875;Dbxref=NCBI_GP:RUP89402.1;Name=RUP89402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189426.1;locus_tag=D8M40_04875;product=hypothetical protein;protein_id=RUP89402.1;transl_table=11 RBME01000004.1 Genbank gene 85855 87435 . + . ID=gene-D8M40_04880;Name=D8M40_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04880 RBME01000004.1 Protein Homology CDS 85855 87435 . + 0 ID=cds-RUP89403.1;Parent=gene-D8M40_04880;Dbxref=NCBI_GP:RUP89403.1;Name=RUP89403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582567.1;locus_tag=D8M40_04880;product=hypothetical protein;protein_id=RUP89403.1;transl_table=11 RBME01000004.1 Genbank gene 87432 87902 . - . ID=gene-D8M40_04885;Name=D8M40_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04885 RBME01000004.1 Protein Homology CDS 87432 87902 . - 0 ID=cds-RUP89404.1;Parent=gene-D8M40_04885;Dbxref=NCBI_GP:RUP89404.1;Name=RUP89404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277253.1;locus_tag=D8M40_04885;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=RUP89404.1;transl_table=11 RBME01000004.1 Genbank gene 87926 88777 . + . ID=gene-D8M40_04890;Name=D8M40_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04890 RBME01000004.1 Protein Homology CDS 87926 88777 . + 0 ID=cds-RUP89470.1;Parent=gene-D8M40_04890;Dbxref=NCBI_GP:RUP89470.1;Name=RUP89470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599881.1;locus_tag=D8M40_04890;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=RUP89470.1;transl_table=11 RBME01000004.1 Genbank gene 88875 89183 . + . ID=gene-D8M40_04895;Name=D8M40_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04895 RBME01000004.1 Protein Homology CDS 88875 89183 . + 0 ID=cds-RUP89471.1;Parent=gene-D8M40_04895;Dbxref=NCBI_GP:RUP89471.1;Name=RUP89471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650495.1;locus_tag=D8M40_04895;product=DUF3017 domain-containing protein;protein_id=RUP89471.1;transl_table=11 RBME01000004.1 Genbank gene 89235 90617 . + . ID=gene-D8M40_04900;Name=D8M40_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04900 RBME01000004.1 Protein Homology CDS 89235 90617 . + 0 ID=cds-RUP89405.1;Parent=gene-D8M40_04900;Dbxref=NCBI_GP:RUP89405.1;Name=RUP89405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326645.1;locus_tag=D8M40_04900;product=GntP family permease;protein_id=RUP89405.1;transl_table=11 RBME01000004.1 Genbank gene 90604 91125 . - . ID=gene-D8M40_04905;Name=D8M40_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04905 RBME01000004.1 Protein Homology CDS 90604 91125 . - 0 ID=cds-RUP89406.1;Parent=gene-D8M40_04905;Dbxref=NCBI_GP:RUP89406.1;Name=RUP89406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121415.1;locus_tag=D8M40_04905;product=gluconokinase;protein_id=RUP89406.1;transl_table=11 RBME01000004.1 Genbank gene 91136 92245 . - . ID=gene-D8M40_04910;Name=D8M40_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04910 RBME01000004.1 GeneMarkS+ CDS 91136 92245 . - 0 ID=cds-RUP89407.1;Parent=gene-D8M40_04910;Dbxref=NCBI_GP:RUP89407.1;Name=RUP89407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04910;product=hypothetical protein;protein_id=RUP89407.1;transl_table=11 RBME01000004.1 Genbank gene 92339 93103 . - . ID=gene-D8M40_04915;Name=D8M40_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04915 RBME01000004.1 Protein Homology CDS 92339 93103 . - 0 ID=cds-RUP89408.1;Parent=gene-D8M40_04915;Dbxref=NCBI_GP:RUP89408.1;Name=RUP89408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441631.1;locus_tag=D8M40_04915;product=TetR/AcrR family transcriptional regulator;protein_id=RUP89408.1;transl_table=11 RBME01000004.1 Genbank gene 93096 95498 . - . ID=gene-D8M40_04920;Name=D8M40_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04920 RBME01000004.1 Protein Homology CDS 93096 95498 . - 0 ID=cds-RUP89409.1;Parent=gene-D8M40_04920;Dbxref=NCBI_GP:RUP89409.1;Name=RUP89409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121418.1;locus_tag=D8M40_04920;product=MMPL family transporter;protein_id=RUP89409.1;transl_table=11 RBME01000004.1 Genbank gene 95651 96769 . - . ID=gene-D8M40_04925;Name=D8M40_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04925 RBME01000004.1 Protein Homology CDS 95651 96769 . - 0 ID=cds-RUP89410.1;Parent=gene-D8M40_04925;Dbxref=NCBI_GP:RUP89410.1;Name=RUP89410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121419.1;locus_tag=D8M40_04925;product=homoserine O-acetyltransferase;protein_id=RUP89410.1;transl_table=11 RBME01000004.1 Genbank gene 97012 98364 . + . ID=gene-D8M40_04930;Name=D8M40_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04930 RBME01000004.1 Protein Homology CDS 97012 98364 . + 0 ID=cds-RUP89411.1;Parent=gene-D8M40_04930;Dbxref=NCBI_GP:RUP89411.1;Name=RUP89411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821331.1;locus_tag=D8M40_04930;product=amino acid permease;protein_id=RUP89411.1;transl_table=11 RBME01000004.1 Genbank gene 98872 101088 . - . ID=gene-D8M40_04935;Name=D8M40_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04935 RBME01000004.1 Protein Homology CDS 98872 101088 . - 0 ID=cds-RUP89412.1;Parent=gene-D8M40_04935;Dbxref=NCBI_GP:RUP89412.1;Name=RUP89412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189398.1;locus_tag=D8M40_04935;product=NADP-dependent isocitrate dehydrogenase;protein_id=RUP89412.1;transl_table=11 RBME01000004.1 Genbank gene 101377 102525 . + . ID=gene-D8M40_04940;Name=D8M40_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04940 RBME01000004.1 Protein Homology CDS 101377 102525 . + 0 ID=cds-RUP89413.1;Parent=gene-D8M40_04940;Dbxref=NCBI_GP:RUP89413.1;Name=RUP89413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121422.1;locus_tag=D8M40_04940;product=MFS transporter;protein_id=RUP89413.1;transl_table=11 RBME01000004.1 Genbank gene 102564 103499 . + . ID=gene-D8M40_04945;Name=D8M40_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04945 RBME01000004.1 Protein Homology CDS 102564 103499 . + 0 ID=cds-RUP89414.1;Parent=gene-D8M40_04945;Dbxref=NCBI_GP:RUP89414.1;Name=RUP89414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121423.1;locus_tag=D8M40_04945;product=exodeoxyribonuclease III;protein_id=RUP89414.1;transl_table=11 RBME01000004.1 Genbank gene 103530 104309 . + . ID=gene-D8M40_04950;Name=D8M40_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04950 RBME01000004.1 Protein Homology CDS 103530 104309 . + 0 ID=cds-RUP89415.1;Parent=gene-D8M40_04950;Dbxref=NCBI_GP:RUP89415.1;Name=RUP89415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121424.1;locus_tag=D8M40_04950;product=trimeric intracellular cation channel family protein;protein_id=RUP89415.1;transl_table=11 RBME01000004.1 Genbank gene 104365 104556 . + . ID=gene-D8M40_04955;Name=D8M40_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04955 RBME01000004.1 GeneMarkS+ CDS 104365 104556 . + 0 ID=cds-RUP89416.1;Parent=gene-D8M40_04955;Dbxref=NCBI_GP:RUP89416.1;Name=RUP89416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04955;product=hypothetical protein;protein_id=RUP89416.1;transl_table=11 RBME01000004.1 Genbank gene 104691 105722 . + . ID=gene-D8M40_04960;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D8M40_04960 RBME01000004.1 Protein Homology CDS 104691 105722 . + 0 ID=cds-RUP89417.1;Parent=gene-D8M40_04960;Dbxref=NCBI_GP:RUP89417.1;Name=RUP89417.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121426.1;locus_tag=D8M40_04960;product=tryptophan--tRNA ligase;protein_id=RUP89417.1;transl_table=11 RBME01000004.1 Genbank gene 105908 106903 . + . ID=gene-D8M40_04965;Name=D8M40_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04965 RBME01000004.1 Protein Homology CDS 105908 106903 . + 0 ID=cds-RUP89472.1;Parent=gene-D8M40_04965;Dbxref=NCBI_GP:RUP89472.1;Name=RUP89472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849704.1;locus_tag=D8M40_04965;product=YihY family inner membrane protein;protein_id=RUP89472.1;transl_table=11 RBME01000004.1 Genbank gene 107019 108398 . - . ID=gene-D8M40_04970;Name=D8M40_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04970 RBME01000004.1 Protein Homology CDS 107019 108398 . - 0 ID=cds-RUP89418.1;Parent=gene-D8M40_04970;Dbxref=NCBI_GP:RUP89418.1;Name=RUP89418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121428.1;locus_tag=D8M40_04970;product=D-alanyl-D-alanine carboxypeptidase;protein_id=RUP89418.1;transl_table=11 RBME01000004.1 Genbank gene 108500 109558 . + . ID=gene-D8M40_04975;Name=D8M40_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04975 RBME01000004.1 GeneMarkS+ CDS 108500 109558 . + 0 ID=cds-RUP89419.1;Parent=gene-D8M40_04975;Dbxref=NCBI_GP:RUP89419.1;Name=RUP89419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04975;product=adenosine deaminase;protein_id=RUP89419.1;transl_table=11 RBME01000004.1 Genbank gene 109567 110817 . - . ID=gene-D8M40_04980;Name=D8M40_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04980 RBME01000004.1 Protein Homology CDS 109567 110817 . - 0 ID=cds-RUP89473.1;Parent=gene-D8M40_04980;Dbxref=NCBI_GP:RUP89473.1;Name=RUP89473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849695.1;locus_tag=D8M40_04980;product=hypothetical protein;protein_id=RUP89473.1;transl_table=11 RBME01000004.1 Genbank gene 110917 111873 . - . ID=gene-D8M40_04985;Name=D8M40_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04985 RBME01000004.1 Protein Homology CDS 110917 111873 . - 0 ID=cds-RUP89420.1;Parent=gene-D8M40_04985;Dbxref=NCBI_GP:RUP89420.1;Name=RUP89420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00877.17;locus_tag=D8M40_04985;product=NlpC/P60 family protein;protein_id=RUP89420.1;transl_table=11 RBME01000004.1 Genbank gene 111873 112199 . - . ID=gene-D8M40_04990;Name=D8M40_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04990 RBME01000004.1 GeneMarkS+ CDS 111873 112199 . - 0 ID=cds-RUP89421.1;Parent=gene-D8M40_04990;Dbxref=NCBI_GP:RUP89421.1;Name=RUP89421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_04990;product=hypothetical protein;protein_id=RUP89421.1;transl_table=11 RBME01000004.1 Genbank gene 112301 112936 . + . ID=gene-D8M40_04995;Name=D8M40_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_04995 RBME01000004.1 Protein Homology CDS 112301 112936 . + 0 ID=cds-RUP89422.1;Parent=gene-D8M40_04995;Dbxref=NCBI_GP:RUP89422.1;Name=RUP89422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599916.1;locus_tag=D8M40_04995;product=uracil phosphoribosyltransferase;protein_id=RUP89422.1;transl_table=11 RBME01000004.1 Genbank gene 113028 113465 . + . ID=gene-D8M40_05000;Name=D8M40_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05000 RBME01000004.1 Protein Homology CDS 113028 113465 . + 0 ID=cds-RUP89423.1;Parent=gene-D8M40_05000;Dbxref=NCBI_GP:RUP89423.1;Name=RUP89423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322588.1;locus_tag=D8M40_05000;product=XRE family transcriptional regulator;protein_id=RUP89423.1;transl_table=11 RBME01000004.1 Genbank gene 113553 114743 . + . ID=gene-D8M40_05005;Name=D8M40_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05005 RBME01000004.1 Protein Homology CDS 113553 114743 . + 0 ID=cds-RUP89424.1;Parent=gene-D8M40_05005;Dbxref=NCBI_GP:RUP89424.1;Name=RUP89424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121435.1;locus_tag=D8M40_05005;product=amidohydrolase;protein_id=RUP89424.1;transl_table=11 RBME01000004.1 Genbank gene 114876 116303 . + . ID=gene-D8M40_05010;Name=D8M40_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05010 RBME01000004.1 Protein Homology CDS 114876 116303 . + 0 ID=cds-RUP89425.1;Parent=gene-D8M40_05010;Dbxref=NCBI_GP:RUP89425.1;Name=RUP89425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849681.1;locus_tag=D8M40_05010;product=NAD(P)H-quinone dehydrogenase;protein_id=RUP89425.1;transl_table=11 RBME01000004.1 Genbank gene 116484 119912 . + . ID=gene-D8M40_05015;Name=D8M40_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05015 RBME01000004.1 Protein Homology CDS 116484 119912 . + 0 ID=cds-RUP89426.1;Parent=gene-D8M40_05015;Dbxref=NCBI_GP:RUP89426.1;Name=RUP89426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121437.1;locus_tag=D8M40_05015;product=pyruvate carboxylase;protein_id=RUP89426.1;transl_table=11 RBME01000004.1 Genbank gene 119945 120907 . - . ID=gene-D8M40_05020;Name=D8M40_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05020 RBME01000004.1 Protein Homology CDS 119945 120907 . - 0 ID=cds-RUP89427.1;Parent=gene-D8M40_05020;Dbxref=NCBI_GP:RUP89427.1;Name=RUP89427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01497.16;locus_tag=D8M40_05020;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP89427.1;transl_table=11 RBME01000004.1 Genbank gene 120955 121158 . + . ID=gene-D8M40_05025;Name=D8M40_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05025 RBME01000004.1 GeneMarkS+ CDS 120955 121158 . + 0 ID=cds-RUP89428.1;Parent=gene-D8M40_05025;Dbxref=NCBI_GP:RUP89428.1;Name=RUP89428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05025;product=hypothetical protein;protein_id=RUP89428.1;transl_table=11 RBME01000004.1 Genbank gene 121309 121809 . - . ID=gene-D8M40_05030;Name=D8M40_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05030 RBME01000004.1 Protein Homology CDS 121309 121809 . - 0 ID=cds-RUP89429.1;Parent=gene-D8M40_05030;Dbxref=NCBI_GP:RUP89429.1;Name=RUP89429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121439.1;locus_tag=D8M40_05030;product=GNAT family N-acetyltransferase;protein_id=RUP89429.1;transl_table=11 RBME01000004.1 Genbank gene 121875 123653 . - . ID=gene-D8M40_05035;Name=D8M40_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05035 RBME01000004.1 Protein Homology CDS 121875 123653 . - 0 ID=cds-RUP89430.1;Parent=gene-D8M40_05035;Dbxref=NCBI_GP:RUP89430.1;Name=RUP89430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189359.1;locus_tag=D8M40_05035;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=RUP89430.1;transl_table=11 RBME01000004.1 Genbank gene 123940 124827 . - . ID=gene-D8M40_05040;Name=D8M40_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05040 RBME01000004.1 Protein Homology CDS 123940 124827 . - 0 ID=cds-RUP89431.1;Parent=gene-D8M40_05040;Dbxref=NCBI_GP:RUP89431.1;Name=RUP89431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121441.1;locus_tag=D8M40_05040;product=sulfurtransferase;protein_id=RUP89431.1;transl_table=11 RBME01000004.1 Genbank gene 124912 126000 . + . ID=gene-D8M40_05045;Name=D8M40_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05045 RBME01000004.1 Protein Homology CDS 124912 126000 . + 0 ID=cds-RUP89474.1;Parent=gene-D8M40_05045;Dbxref=NCBI_GP:RUP89474.1;Name=RUP89474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014800100.1;locus_tag=D8M40_05045;product=hypothetical protein;protein_id=RUP89474.1;transl_table=11 RBME01000004.1 Genbank gene 125997 126470 . - . ID=gene-D8M40_05050;Name=D8M40_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05050 RBME01000004.1 Protein Homology CDS 125997 126470 . - 0 ID=cds-RUP89432.1;Parent=gene-D8M40_05050;Dbxref=NCBI_GP:RUP89432.1;Name=RUP89432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296976.1;locus_tag=D8M40_05050;product=DUF3151 domain-containing protein;protein_id=RUP89432.1;transl_table=11 RBME01000004.1 Genbank gene 126563 127186 . - . ID=gene-D8M40_05055;Name=D8M40_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05055 RBME01000004.1 Protein Homology CDS 126563 127186 . - 0 ID=cds-RUP89475.1;Parent=gene-D8M40_05055;Dbxref=NCBI_GP:RUP89475.1;Name=RUP89475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021157.1;locus_tag=D8M40_05055;product=septum formation inhibitor Maf;protein_id=RUP89475.1;transl_table=11 RBME01000004.1 Genbank gene 127210 127440 . - . ID=gene-D8M40_05060;Name=D8M40_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05060 RBME01000004.1 Protein Homology CDS 127210 127440 . - 0 ID=cds-RUP89433.1;Parent=gene-D8M40_05060;Dbxref=NCBI_GP:RUP89433.1;Name=RUP89433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13822.4;locus_tag=D8M40_05060;product=acyl-CoA carboxylase subunit epsilon;protein_id=RUP89433.1;transl_table=11 RBME01000004.1 Genbank gene 127469 129034 . - . ID=gene-D8M40_05065;Name=D8M40_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05065 RBME01000004.1 Protein Homology CDS 127469 129034 . - 0 ID=cds-RUP89434.1;Parent=gene-D8M40_05065;Dbxref=NCBI_GP:RUP89434.1;Name=RUP89434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121446.1;locus_tag=D8M40_05065;product=acyl-CoA carboxylase subunit beta;protein_id=RUP89434.1;transl_table=11 RBME01000004.1 Genbank gene 129099 129320 . - . ID=gene-D8M40_05070;Name=D8M40_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05070 RBME01000004.1 Protein Homology CDS 129099 129320 . - 0 ID=cds-RUP89435.1;Parent=gene-D8M40_05070;Dbxref=NCBI_GP:RUP89435.1;Name=RUP89435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13822.4;locus_tag=D8M40_05070;product=acyl-CoA carboxylase subunit epsilon;protein_id=RUP89435.1;transl_table=11 RBME01000004.1 Genbank gene 129378 130997 . - . ID=gene-D8M40_05075;Name=D8M40_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05075 RBME01000004.1 Protein Homology CDS 129378 130997 . - 0 ID=cds-RUP89436.1;Parent=gene-D8M40_05075;Dbxref=NCBI_GP:RUP89436.1;Name=RUP89436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599940.1;locus_tag=D8M40_05075;product=acyl-CoA carboxylase subunit beta;protein_id=RUP89436.1;transl_table=11 RBME01000004.1 Genbank gene 131110 132840 . - . ID=gene-D8M40_05080;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=D8M40_05080 RBME01000004.1 Protein Homology CDS 131110 132840 . - 0 ID=cds-RUP89437.1;Parent=gene-D8M40_05080;Dbxref=NCBI_GP:RUP89437.1;Name=RUP89437.1;gbkey=CDS;gene=treS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121449.1;locus_tag=D8M40_05080;product=maltose alpha-D-glucosyltransferase;protein_id=RUP89437.1;transl_table=11 RBME01000004.1 Genbank gene 132954 133160 . - . ID=gene-D8M40_05085;Name=D8M40_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05085 RBME01000004.1 Protein Homology CDS 132954 133160 . - 0 ID=cds-RUP89438.1;Parent=gene-D8M40_05085;Dbxref=NCBI_GP:RUP89438.1;Name=RUP89438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839607.1;locus_tag=D8M40_05085;product=hypothetical protein;protein_id=RUP89438.1;transl_table=11 RBME01000004.1 Genbank gene 133166 134053 . - . ID=gene-D8M40_05090;Name=D8M40_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05090 RBME01000004.1 Protein Homology CDS 133166 134053 . - 0 ID=cds-RUP89439.1;Parent=gene-D8M40_05090;Dbxref=NCBI_GP:RUP89439.1;Name=RUP89439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931803.1;locus_tag=D8M40_05090;product=carbohydrate ABC transporter permease;protein_id=RUP89439.1;transl_table=11 RBME01000004.1 Genbank gene 134054 135025 . - . ID=gene-D8M40_05095;Name=D8M40_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05095 RBME01000004.1 Protein Homology CDS 134054 135025 . - 0 ID=cds-RUP89440.1;Parent=gene-D8M40_05095;Dbxref=NCBI_GP:RUP89440.1;Name=RUP89440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400128.1;locus_tag=D8M40_05095;product=sugar ABC transporter permease;protein_id=RUP89440.1;transl_table=11 RBME01000004.1 Genbank gene 135027 136337 . - . ID=gene-D8M40_05100;Name=D8M40_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05100 RBME01000004.1 Protein Homology CDS 135027 136337 . - 0 ID=cds-RUP89476.1;Parent=gene-D8M40_05100;Dbxref=NCBI_GP:RUP89476.1;Name=RUP89476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821486.1;locus_tag=D8M40_05100;product=ABC transporter substrate-binding protein;protein_id=RUP89476.1;transl_table=11 RBME01000004.1 Genbank gene 136540 137745 . - . ID=gene-D8M40_05105;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=D8M40_05105 RBME01000004.1 Protein Homology CDS 136540 137745 . - 0 ID=cds-RUP89441.1;Parent=gene-D8M40_05105;Dbxref=NCBI_GP:RUP89441.1;Name=RUP89441.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599959.1;locus_tag=D8M40_05105;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=RUP89441.1;transl_table=11 RBME01000004.1 Genbank gene 137778 138515 . + . ID=gene-D8M40_05110;Name=D8M40_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05110 RBME01000004.1 Protein Homology CDS 137778 138515 . + 0 ID=cds-RUP89442.1;Parent=gene-D8M40_05110;Dbxref=NCBI_GP:RUP89442.1;Name=RUP89442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121455.1;locus_tag=D8M40_05110;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=RUP89442.1;transl_table=11 RBME01000004.1 Genbank gene 138524 139030 . + . ID=gene-D8M40_05115;Name=D8M40_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05115 RBME01000004.1 Protein Homology CDS 138524 139030 . + 0 ID=cds-RUP89477.1;Parent=gene-D8M40_05115;Dbxref=NCBI_GP:RUP89477.1;Name=RUP89477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016829817.1;locus_tag=D8M40_05115;product=hypothetical protein;protein_id=RUP89477.1;transl_table=11 RBME01000004.1 Genbank gene 139102 140367 . + . ID=gene-D8M40_05120;Name=D8M40_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05120 RBME01000004.1 Protein Homology CDS 139102 140367 . + 0 ID=cds-RUP89443.1;Parent=gene-D8M40_05120;Dbxref=NCBI_GP:RUP89443.1;Name=RUP89443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121457.1;locus_tag=D8M40_05120;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=RUP89443.1;transl_table=11 RBME01000004.1 Genbank gene 140419 140982 . + . ID=gene-D8M40_05125;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=D8M40_05125 RBME01000004.1 Protein Homology CDS 140419 140982 . + 0 ID=cds-RUP89444.1;Parent=gene-D8M40_05125;Dbxref=NCBI_GP:RUP89444.1;Name=RUP89444.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121458.1;locus_tag=D8M40_05125;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=RUP89444.1;transl_table=11 RBME01000004.1 Genbank gene 141136 142095 . + . ID=gene-D8M40_05130;Name=D8M40_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05130 RBME01000004.1 Protein Homology CDS 141136 142095 . + 0 ID=cds-RUP89445.1;Parent=gene-D8M40_05130;Dbxref=NCBI_GP:RUP89445.1;Name=RUP89445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121459.1;locus_tag=D8M40_05130;product=bile acid:sodium symporter family protein;protein_id=RUP89445.1;transl_table=11 RBME01000004.1 Genbank gene 142132 143127 . + . ID=gene-D8M40_05135;Name=D8M40_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05135 RBME01000004.1 Protein Homology CDS 142132 143127 . + 0 ID=cds-RUP89446.1;Parent=gene-D8M40_05135;Dbxref=NCBI_GP:RUP89446.1;Name=RUP89446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121460.1;locus_tag=D8M40_05135;product=bile acid:sodium symporter family protein;protein_id=RUP89446.1;transl_table=11 RBME01000004.1 Genbank gene 143189 144784 . + . ID=gene-D8M40_05140;Name=D8M40_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05140 RBME01000004.1 Protein Homology CDS 143189 144784 . + 0 ID=cds-RUP89447.1;Parent=gene-D8M40_05140;Dbxref=NCBI_GP:RUP89447.1;Name=RUP89447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121461.1;locus_tag=D8M40_05140;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=RUP89447.1;transl_table=11 RBME01000004.1 Genbank gene 145033 145683 . + . ID=gene-D8M40_05145;Name=D8M40_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05145 RBME01000004.1 Protein Homology CDS 145033 145683 . + 0 ID=cds-RUP89448.1;Parent=gene-D8M40_05145;Dbxref=NCBI_GP:RUP89448.1;Name=RUP89448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14014.4;locus_tag=D8M40_05145;product=DUF4230 domain-containing protein;protein_id=RUP89448.1;transl_table=11 RBME01000004.1 Genbank gene 145752 147068 . + . ID=gene-D8M40_05150;Name=D8M40_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05150 RBME01000004.1 Protein Homology CDS 145752 147068 . + 0 ID=cds-RUP89449.1;Parent=gene-D8M40_05150;Dbxref=NCBI_GP:RUP89449.1;Name=RUP89449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121463.1;locus_tag=D8M40_05150;product=alpha/beta fold hydrolase;protein_id=RUP89449.1;transl_table=11 RBME01000004.1 Genbank gene 147079 148572 . - . ID=gene-D8M40_05155;Name=D8M40_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05155 RBME01000004.1 Protein Homology CDS 147079 148572 . - 0 ID=cds-RUP89450.1;Parent=gene-D8M40_05155;Dbxref=NCBI_GP:RUP89450.1;Name=RUP89450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121464.1;locus_tag=D8M40_05155;product=ABC transporter ATP-binding protein;protein_id=RUP89450.1;transl_table=11 RBME01000004.1 Genbank gene 148569 149405 . - . ID=gene-D8M40_05160;Name=D8M40_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05160 RBME01000004.1 Protein Homology CDS 148569 149405 . - 0 ID=cds-RUP89451.1;Parent=gene-D8M40_05160;Dbxref=NCBI_GP:RUP89451.1;Name=RUP89451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121465.1;locus_tag=D8M40_05160;product=ABC transporter permease;protein_id=RUP89451.1;transl_table=11 RBME01000004.1 Genbank gene 149402 150358 . - . ID=gene-D8M40_05165;Name=D8M40_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05165 RBME01000004.1 Protein Homology CDS 149402 150358 . - 0 ID=cds-RUP89452.1;Parent=gene-D8M40_05165;Dbxref=NCBI_GP:RUP89452.1;Name=RUP89452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121466.1;locus_tag=D8M40_05165;product=ABC transporter permease;protein_id=RUP89452.1;transl_table=11 RBME01000004.1 Genbank gene 150355 151887 . - . ID=gene-D8M40_05170;Name=D8M40_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05170 RBME01000004.1 Protein Homology CDS 150355 151887 . - 0 ID=cds-RUP89453.1;Parent=gene-D8M40_05170;Dbxref=NCBI_GP:RUP89453.1;Name=RUP89453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121467.1;locus_tag=D8M40_05170;product=ABC transporter substrate-binding protein;protein_id=RUP89453.1;transl_table=11 RBME01000004.1 Genbank gene 151889 152875 . - . ID=gene-D8M40_05175;Name=D8M40_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05175 RBME01000004.1 Protein Homology CDS 151889 152875 . - 0 ID=cds-RUP89478.1;Parent=gene-D8M40_05175;Dbxref=NCBI_GP:RUP89478.1;Name=RUP89478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839805.1;locus_tag=D8M40_05175;product=LLM class flavin-dependent oxidoreductase;protein_id=RUP89478.1;transl_table=11 RBME01000004.1 Genbank gene 153067 154470 . - . ID=gene-D8M40_05180;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D8M40_05180 RBME01000004.1 Protein Homology CDS 153067 154470 . - 0 ID=cds-RUP89454.1;Parent=gene-D8M40_05180;Dbxref=NCBI_GP:RUP89454.1;Name=RUP89454.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121469.1;locus_tag=D8M40_05180;product=branched-chain amino acid transport system II carrier protein;protein_id=RUP89454.1;transl_table=11 RBME01000004.1 Genbank gene 154575 155723 . - . ID=gene-D8M40_05185;Name=D8M40_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05185 RBME01000004.1 Protein Homology CDS 154575 155723 . - 0 ID=cds-RUP89479.1;Parent=gene-D8M40_05185;Dbxref=NCBI_GP:RUP89479.1;Name=RUP89479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401518.1;locus_tag=D8M40_05185;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=RUP89479.1;transl_table=11 RBME01000004.1 Genbank gene 155804 157666 . - . ID=gene-D8M40_05190;Name=D8M40_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05190 RBME01000004.1 Protein Homology CDS 155804 157666 . - 0 ID=cds-RUP89455.1;Parent=gene-D8M40_05190;Dbxref=NCBI_GP:RUP89455.1;Name=RUP89455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121471.1;locus_tag=D8M40_05190;product=ABC transporter ATP-binding protein;protein_id=RUP89455.1;transl_table=11 RBME01000004.1 Genbank gene 158042 158473 . + . ID=gene-D8M40_05195;Name=D8M40_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05195 RBME01000004.1 Protein Homology CDS 158042 158473 . + 0 ID=cds-RUP89480.1;Parent=gene-D8M40_05195;Dbxref=NCBI_GP:RUP89480.1;Name=RUP89480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849344.1;locus_tag=D8M40_05195;product=hypothetical protein;protein_id=RUP89480.1;transl_table=11 RBME01000004.1 Genbank gene 158584 159915 . - . ID=gene-D8M40_05200;Name=D8M40_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05200 RBME01000004.1 Protein Homology CDS 158584 159915 . - 0 ID=cds-RUP89456.1;Parent=gene-D8M40_05200;Dbxref=NCBI_GP:RUP89456.1;Name=RUP89456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00135.26;locus_tag=D8M40_05200;product=carboxylesterase/lipase family protein;protein_id=RUP89456.1;transl_table=11 RBME01000004.1 Genbank gene 159919 160488 . - . ID=gene-D8M40_05205;Name=D8M40_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05205 RBME01000004.1 GeneMarkS+ CDS 159919 160488 . - 0 ID=cds-RUP89457.1;Parent=gene-D8M40_05205;Dbxref=NCBI_GP:RUP89457.1;Name=RUP89457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05205;product=hypothetical protein;protein_id=RUP89457.1;transl_table=11 RBME01000004.1 Genbank pseudogene 160494 160625 . + . ID=gene-D8M40_05210;Name=D8M40_05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05210;pseudo=true RBME01000004.1 Protein Homology CDS 160494 160625 . + 0 ID=cds-D8M40_05210;Parent=gene-D8M40_05210;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M40_05210;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000004.1 Genbank pseudogene 160661 161440 . - . ID=gene-D8M40_05215;Name=D8M40_05215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05215;pseudo=true RBME01000004.1 Protein Homology CDS 160661 161440 . - 0 ID=cds-D8M40_05215;Parent=gene-D8M40_05215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006680457.1;locus_tag=D8M40_05215;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000004.1 Genbank gene 161478 162674 . + . ID=gene-D8M40_05220;Name=D8M40_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05220 RBME01000004.1 Protein Homology CDS 161478 162674 . + 0 ID=cds-RUP89458.1;Parent=gene-D8M40_05220;Dbxref=NCBI_GP:RUP89458.1;Name=RUP89458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359282.1;locus_tag=D8M40_05220;product=hypothetical protein;protein_id=RUP89458.1;transl_table=11 ##sequence-region RBME01000050.1 1 1254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000050.1 Genbank region 1 1254 . + . ID=RBME01000050.1:1..1254;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000050.1 Genbank gene 1 345 . - . ID=gene-D8M40_11485;Name=D8M40_11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11485;partial=true;start_range=.,1 RBME01000050.1 Protein Homology CDS 1 345 . - 0 ID=cds-RUP86368.1;Parent=gene-D8M40_11485;Dbxref=NCBI_GP:RUP86368.1;Name=RUP86368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003216858.1;locus_tag=D8M40_11485;partial=true;product=hypothetical protein;protein_id=RUP86368.1;start_range=.,1;transl_table=11 RBME01000050.1 Genbank gene 530 1254 . + . ID=gene-D8M40_11490;Name=D8M40_11490;end_range=1254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11490;partial=true RBME01000050.1 Protein Homology CDS 530 1254 . + 0 ID=cds-RUP86369.1;Parent=gene-D8M40_11490;Dbxref=NCBI_GP:RUP86369.1;Name=RUP86369.1;end_range=1254,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011336336.1;locus_tag=D8M40_11490;partial=true;product=sodium:proton antiporter;protein_id=RUP86369.1;transl_table=11 ##sequence-region RBME01000051.1 1 1253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000051.1 Genbank region 1 1253 . + . ID=RBME01000051.1:1..1253;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000051.1 Genbank gene 1 428 . - . ID=gene-D8M40_11495;Name=D8M40_11495;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M40_11495;partial=true;start_range=.,1 RBME01000051.1 Genbank rRNA 1 428 . - . ID=rna-D8M40_11495;Parent=gene-D8M40_11495;gbkey=rRNA;locus_tag=D8M40_11495;partial=true;product=16S ribosomal RNA;start_range=.,1 RBME01000051.1 Genbank exon 1 428 . - . ID=exon-D8M40_11495-1;Parent=rna-D8M40_11495;gbkey=rRNA;locus_tag=D8M40_11495;partial=true;product=16S ribosomal RNA;start_range=.,1 RBME01000051.1 Genbank pseudogene 488 741 . + . ID=gene-D8M40_11500;Name=D8M40_11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11500;pseudo=true RBME01000051.1 Protein Homology CDS 488 741 . + 0 ID=cds-D8M40_11500;Parent=gene-D8M40_11500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011331836.1;locus_tag=D8M40_11500;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000051.1 Genbank gene 993 1069 . - . ID=gene-D8M40_11505;Name=D8M40_11505;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_11505 RBME01000051.1 tRNAscan-SE tRNA 993 1069 . - . ID=rna-D8M40_11505;Parent=gene-D8M40_11505;anticodon=(pos:complement(1033..1035));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_11505;product=tRNA-Arg RBME01000051.1 tRNAscan-SE exon 993 1069 . - . ID=exon-D8M40_11505-1;Parent=rna-D8M40_11505;anticodon=(pos:complement(1033..1035));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_11505;product=tRNA-Arg ##sequence-region RBME01000052.1 1 1219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000052.1 Genbank region 1 1219 . + . ID=RBME01000052.1:1..1219;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000052.1 Genbank gene 6 1219 . - . ID=gene-D8M40_11510;Name=D8M40_11510;end_range=1219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11510;partial=true RBME01000052.1 Protein Homology CDS 6 1219 . - 2 ID=cds-RUP86366.1;Parent=gene-D8M40_11510;Dbxref=NCBI_GP:RUP86366.1;Name=RUP86366.1;end_range=1219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032655801.1;locus_tag=D8M40_11510;partial=true;product=amino acid adenylation domain-containing protein;protein_id=RUP86366.1;transl_table=11 ##sequence-region RBME01000053.1 1 1216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000053.1 Genbank region 1 1216 . + . ID=RBME01000053.1:1..1216;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000053.1 Genbank gene 1 83 . - . ID=gene-D8M40_11515;Name=D8M40_11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11515;partial=true;start_range=.,1 RBME01000053.1 Protein Homology CDS 1 83 . - 0 ID=cds-RUP86364.1;Parent=gene-D8M40_11515;Dbxref=NCBI_GP:RUP86364.1;Name=RUP86364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017139583.1;locus_tag=D8M40_11515;partial=true;product=molecular chaperone;protein_id=RUP86364.1;start_range=.,1;transl_table=11 RBME01000053.1 Genbank gene 303 824 . + . ID=gene-D8M40_11520;Name=D8M40_11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11520 RBME01000053.1 Protein Homology CDS 303 824 . + 0 ID=cds-RUP86362.1;Parent=gene-D8M40_11520;Dbxref=NCBI_GP:RUP86362.1;Name=RUP86362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003192436.1;locus_tag=D8M40_11520;product=chemotaxis protein CheY;protein_id=RUP86362.1;transl_table=11 RBME01000053.1 Genbank gene 920 1216 . - . ID=gene-D8M40_11525;Name=D8M40_11525;end_range=1216,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11525;partial=true RBME01000053.1 Protein Homology CDS 920 1216 . - 0 ID=cds-RUP86363.1;Parent=gene-D8M40_11525;Dbxref=NCBI_GP:RUP86363.1;Name=RUP86363.1;end_range=1216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003192433.1;locus_tag=D8M40_11525;partial=true;product=aldo/keto reductase;protein_id=RUP86363.1;transl_table=11 ##sequence-region RBME01000054.1 1 1214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000054.1 Genbank region 1 1214 . + . ID=RBME01000054.1:1..1214;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000054.1 Genbank gene 1 1214 . + . ID=gene-D8M40_11530;Name=D8M40_11530;end_range=1214,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M40_11530;partial=true;start_range=.,1 RBME01000054.1 Genbank rRNA 1 1214 . + . ID=rna-D8M40_11530;Parent=gene-D8M40_11530;end_range=1214,.;gbkey=rRNA;locus_tag=D8M40_11530;partial=true;product=23S ribosomal RNA;start_range=.,1 RBME01000054.1 Genbank exon 1 1214 . + . ID=exon-D8M40_11530-1;Parent=rna-D8M40_11530;end_range=1214,.;gbkey=rRNA;locus_tag=D8M40_11530;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region RBME01000055.1 1 1210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000055.1 Genbank region 1 1210 . + . ID=RBME01000055.1:1..1210;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000055.1 Genbank gene 41 1195 . - . ID=gene-D8M40_11535;Name=D8M40_11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11535 RBME01000055.1 GeneMarkS+ CDS 41 1195 . - 0 ID=cds-RUP86359.1;Parent=gene-D8M40_11535;Dbxref=NCBI_GP:RUP86359.1;Name=RUP86359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11535;product=YncE family protein;protein_id=RUP86359.1;transl_table=11 ##sequence-region RBME01000056.1 1 1203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000056.1 Genbank region 1 1203 . + . ID=RBME01000056.1:1..1203;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000056.1 Genbank gene 60 1203 . - . ID=gene-D8M40_11540;Name=D8M40_11540;end_range=1203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11540;partial=true RBME01000056.1 Protein Homology CDS 60 1203 . - 1 ID=cds-RUP85920.1;Parent=gene-D8M40_11540;Dbxref=NCBI_GP:RUP85920.1;Name=RUP85920.1;end_range=1203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017530783.1;locus_tag=D8M40_11540;partial=true;product=acyl-CoA dehydrogenase;protein_id=RUP85920.1;transl_table=11 ##sequence-region RBME01000057.1 1 1197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000057.1 Genbank region 1 1197 . + . ID=RBME01000057.1:1..1197;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000057.1 Genbank gene 1 87 . + . ID=gene-D8M40_11545;Name=D8M40_11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11545;partial=true;start_range=.,1 RBME01000057.1 GeneMarkS+ CDS 1 87 . + 0 ID=cds-RUP85916.1;Parent=gene-D8M40_11545;Dbxref=NCBI_GP:RUP85916.1;Name=RUP85916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11545;partial=true;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=RUP85916.1;start_range=.,1;transl_table=11 RBME01000057.1 Genbank gene 103 495 . + . ID=gene-D8M40_11550;Name=D8M40_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11550 RBME01000057.1 Protein Homology CDS 103 495 . + 0 ID=cds-RUP85917.1;Parent=gene-D8M40_11550;Dbxref=NCBI_GP:RUP85917.1;Name=RUP85917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014719074.1;locus_tag=D8M40_11550;product=5-carboxymethyl-2-hydroxymuconate isomerase;protein_id=RUP85917.1;transl_table=11 RBME01000057.1 Genbank gene 628 1197 . + . ID=gene-D8M40_11555;Name=D8M40_11555;end_range=1197,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11555;partial=true RBME01000057.1 Protein Homology CDS 628 1197 . + 0 ID=cds-RUP85918.1;Parent=gene-D8M40_11555;Dbxref=NCBI_GP:RUP85918.1;Name=RUP85918.1;end_range=1197,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014719075.1;locus_tag=D8M40_11555;partial=true;product=MFS transporter;protein_id=RUP85918.1;transl_table=11 ##sequence-region RBME01000058.1 1 1191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000058.1 Genbank region 1 1191 . + . ID=RBME01000058.1:1..1191;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000058.1 Genbank gene 1 246 . - . ID=gene-D8M40_11560;Name=D8M40_11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11560;partial=true;start_range=.,1 RBME01000058.1 Protein Homology CDS 1 246 . - 0 ID=cds-RUP85912.1;Parent=gene-D8M40_11560;Dbxref=NCBI_GP:RUP85912.1;Name=RUP85912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018604307.1;locus_tag=D8M40_11560;partial=true;product=hypothetical protein;protein_id=RUP85912.1;start_range=.,1;transl_table=11 RBME01000058.1 Genbank gene 526 750 . - . ID=gene-D8M40_11565;Name=D8M40_11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11565 RBME01000058.1 Protein Homology CDS 526 750 . - 0 ID=cds-RUP85913.1;Parent=gene-D8M40_11565;Dbxref=NCBI_GP:RUP85913.1;Name=RUP85913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008031832.1;locus_tag=D8M40_11565;product=hypothetical protein;protein_id=RUP85913.1;transl_table=11 RBME01000058.1 Genbank pseudogene 764 1191 . - . ID=gene-D8M40_11570;Name=D8M40_11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11570;pseudo=true RBME01000058.1 Protein Homology CDS 764 1191 . - 1 ID=cds-D8M40_11570;Parent=gene-D8M40_11570;Note=frameshifted%3B incomplete%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007977589.1;locus_tag=D8M40_11570;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region RBME01000059.1 1 1156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000059.1 Genbank region 1 1156 . + . ID=RBME01000059.1:1..1156;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000059.1 Genbank gene 457 738 . + . ID=gene-D8M40_11575;Name=D8M40_11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11575 RBME01000059.1 Protein Homology CDS 457 738 . + 0 ID=cds-RUP85909.1;Parent=gene-D8M40_11575;Dbxref=NCBI_GP:RUP85909.1;Name=RUP85909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019692933.1;locus_tag=D8M40_11575;product=N-acetyltransferase;protein_id=RUP85909.1;transl_table=11 RBME01000059.1 Genbank gene 804 1156 . - . ID=gene-D8M40_11580;Name=D8M40_11580;end_range=1156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11580;partial=true RBME01000059.1 Protein Homology CDS 804 1156 . - 2 ID=cds-RUP85910.1;Parent=gene-D8M40_11580;Dbxref=NCBI_GP:RUP85910.1;Name=RUP85910.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;end_range=1156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007908583.1;locus_tag=D8M40_11580;partial=true;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=RUP85910.1;transl_table=11 ##sequence-region RBME01000005.1 1 144993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000005.1 Genbank region 1 144993 . + . ID=RBME01000005.1:1..144993;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000005.1 Genbank gene 1 513 . + . ID=gene-D8M40_05225;Name=D8M40_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05225;partial=true;start_range=.,1 RBME01000005.1 GeneMarkS+ CDS 1 513 . + 0 ID=cds-RUP89046.1;Parent=gene-D8M40_05225;Dbxref=NCBI_GP:RUP89046.1;Name=RUP89046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05225;partial=true;product=hypothetical protein;protein_id=RUP89046.1;start_range=.,1;transl_table=11 RBME01000005.1 Genbank gene 633 1307 . - . ID=gene-D8M40_05230;Name=D8M40_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05230 RBME01000005.1 Protein Homology CDS 633 1307 . - 0 ID=cds-RUP89047.1;Parent=gene-D8M40_05230;Dbxref=NCBI_GP:RUP89047.1;Name=RUP89047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;locus_tag=D8M40_05230;product=DNA-binding response regulator;protein_id=RUP89047.1;transl_table=11 RBME01000005.1 Genbank gene 1307 2545 . - . ID=gene-D8M40_05235;Name=D8M40_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05235 RBME01000005.1 Protein Homology CDS 1307 2545 . - 0 ID=cds-RUP89048.1;Parent=gene-D8M40_05235;Dbxref=NCBI_GP:RUP89048.1;Name=RUP89048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M40_05235;product=hypothetical protein;protein_id=RUP89048.1;transl_table=11 RBME01000005.1 Genbank gene 3015 6011 . + . ID=gene-D8M40_05240;Name=D8M40_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05240 RBME01000005.1 Protein Homology CDS 3015 6011 . + 0 ID=cds-RUP89049.1;Parent=gene-D8M40_05240;Dbxref=NCBI_GP:RUP89049.1;Name=RUP89049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00041.19;locus_tag=D8M40_05240;product=hypothetical protein;protein_id=RUP89049.1;transl_table=11 RBME01000005.1 Genbank gene 6011 7027 . + . ID=gene-D8M40_05245;Name=D8M40_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05245 RBME01000005.1 Protein Homology CDS 6011 7027 . + 0 ID=cds-RUP89050.1;Parent=gene-D8M40_05245;Dbxref=NCBI_GP:RUP89050.1;Name=RUP89050.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=D8M40_05245;product=hypothetical protein;protein_id=RUP89050.1;transl_table=11 RBME01000005.1 Genbank pseudogene 7186 7520 . + . ID=gene-D8M40_05250;Name=D8M40_05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05250;pseudo=true RBME01000005.1 Protein Homology CDS 7186 7520 . + 0 ID=cds-D8M40_05250;Parent=gene-D8M40_05250;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M40_05250;product=transposase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 7517 7918 . + . ID=gene-D8M40_05255;Name=D8M40_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05255 RBME01000005.1 Protein Homology CDS 7517 7918 . + 0 ID=cds-RUP89051.1;Parent=gene-D8M40_05255;Dbxref=NCBI_GP:RUP89051.1;Name=RUP89051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M40_05255;product=hypothetical protein;protein_id=RUP89051.1;transl_table=11 RBME01000005.1 Genbank gene 7920 8087 . + . ID=gene-D8M40_05260;Name=D8M40_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05260 RBME01000005.1 Protein Homology CDS 7920 8087 . + 0 ID=cds-RUP89052.1;Parent=gene-D8M40_05260;Dbxref=NCBI_GP:RUP89052.1;Name=RUP89052.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M40_05260;product=hypothetical protein;protein_id=RUP89052.1;transl_table=11 RBME01000005.1 Genbank gene 8081 8440 . + . ID=gene-D8M40_05265;Name=D8M40_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05265 RBME01000005.1 Protein Homology CDS 8081 8440 . + 0 ID=cds-RUP89053.1;Parent=gene-D8M40_05265;Dbxref=NCBI_GP:RUP89053.1;Name=RUP89053.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M40_05265;product=hypothetical protein;protein_id=RUP89053.1;transl_table=11 RBME01000005.1 Genbank gene 8869 9837 . + . ID=gene-D8M40_05270;Name=D8M40_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05270 RBME01000005.1 Protein Homology CDS 8869 9837 . + 0 ID=cds-RUP89054.1;Parent=gene-D8M40_05270;Dbxref=NCBI_GP:RUP89054.1;Name=RUP89054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00899.19;locus_tag=D8M40_05270;product=ThiF family adenylyltransferase;protein_id=RUP89054.1;transl_table=11 RBME01000005.1 Genbank gene 9834 11090 . + . ID=gene-D8M40_05275;Name=D8M40_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05275 RBME01000005.1 GeneMarkS+ CDS 9834 11090 . + 0 ID=cds-RUP89055.1;Parent=gene-D8M40_05275;Dbxref=NCBI_GP:RUP89055.1;Name=RUP89055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05275;product=hypothetical protein;protein_id=RUP89055.1;transl_table=11 RBME01000005.1 Genbank gene 11115 12371 . + . ID=gene-D8M40_05280;Name=D8M40_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05280 RBME01000005.1 Protein Homology CDS 11115 12371 . + 0 ID=cds-RUP89056.1;Parent=gene-D8M40_05280;Dbxref=NCBI_GP:RUP89056.1;Name=RUP89056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05977.11;locus_tag=D8M40_05280;product=MFS transporter;protein_id=RUP89056.1;transl_table=11 RBME01000005.1 Genbank gene 12451 13020 . - . ID=gene-D8M40_05285;Name=D8M40_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05285 RBME01000005.1 Protein Homology CDS 12451 13020 . - 0 ID=cds-RUP89154.1;Parent=gene-D8M40_05285;Dbxref=NCBI_GP:RUP89154.1;Name=RUP89154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009943651.1;locus_tag=D8M40_05285;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=RUP89154.1;transl_table=11 RBME01000005.1 Genbank gene 13162 13626 . + . ID=gene-D8M40_05290;Name=D8M40_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05290 RBME01000005.1 Protein Homology CDS 13162 13626 . + 0 ID=cds-RUP89057.1;Parent=gene-D8M40_05290;Dbxref=NCBI_GP:RUP89057.1;Name=RUP89057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02537.13;locus_tag=D8M40_05290;product=hypothetical protein;protein_id=RUP89057.1;transl_table=11 RBME01000005.1 Genbank gene 13623 14012 . + . ID=gene-D8M40_05295;Name=D8M40_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05295 RBME01000005.1 Protein Homology CDS 13623 14012 . + 0 ID=cds-RUP89058.1;Parent=gene-D8M40_05295;Dbxref=NCBI_GP:RUP89058.1;Name=RUP89058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768441.1;locus_tag=D8M40_05295;product=hypothetical protein;protein_id=RUP89058.1;transl_table=11 RBME01000005.1 Genbank pseudogene 14043 14242 . + . ID=gene-D8M40_05300;Name=D8M40_05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05300;pseudo=true RBME01000005.1 Protein Homology CDS 14043 14242 . + 0 ID=cds-D8M40_05300;Parent=gene-D8M40_05300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014320389.1;locus_tag=D8M40_05300;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 14405 15013 . + . ID=gene-D8M40_05305;Name=D8M40_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05305 RBME01000005.1 Protein Homology CDS 14405 15013 . + 0 ID=cds-RUP89059.1;Parent=gene-D8M40_05305;Dbxref=NCBI_GP:RUP89059.1;Name=RUP89059.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M40_05305;product=hypothetical protein;protein_id=RUP89059.1;transl_table=11 RBME01000005.1 Genbank pseudogene 15036 15185 . + . ID=gene-D8M40_05310;Name=D8M40_05310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05310;pseudo=true RBME01000005.1 Protein Homology CDS 15036 15185 . + 0 ID=cds-D8M40_05310;Parent=gene-D8M40_05310;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301397.1;locus_tag=D8M40_05310;product=transposase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 15436 15693 . - . ID=gene-D8M40_05315;Name=D8M40_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05315 RBME01000005.1 GeneMarkS+ CDS 15436 15693 . - 0 ID=cds-RUP89060.1;Parent=gene-D8M40_05315;Dbxref=NCBI_GP:RUP89060.1;Name=RUP89060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05315;product=hypothetical protein;protein_id=RUP89060.1;transl_table=11 RBME01000005.1 Genbank gene 15977 16756 . - . ID=gene-D8M40_05320;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=D8M40_05320 RBME01000005.1 Protein Homology CDS 15977 16756 . - 0 ID=cds-RUP89061.1;Parent=gene-D8M40_05320;Dbxref=NCBI_GP:RUP89061.1;Name=RUP89061.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280178.1;locus_tag=D8M40_05320;product=respiratory nitrate reductase subunit gamma;protein_id=RUP89061.1;transl_table=11 RBME01000005.1 Genbank gene 16798 17631 . - . ID=gene-D8M40_05325;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=D8M40_05325 RBME01000005.1 Protein Homology CDS 16798 17631 . - 0 ID=cds-RUP89062.1;Parent=gene-D8M40_05325;Dbxref=NCBI_GP:RUP89062.1;Name=RUP89062.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282382.1;locus_tag=D8M40_05325;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=RUP89062.1;transl_table=11 RBME01000005.1 Genbank gene 17668 19260 . - . ID=gene-D8M40_05330;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=D8M40_05330 RBME01000005.1 Protein Homology CDS 17668 19260 . - 0 ID=cds-RUP89063.1;Parent=gene-D8M40_05330;Dbxref=NCBI_GP:RUP89063.1;Name=RUP89063.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600414.1;locus_tag=D8M40_05330;product=nitrate reductase subunit beta;protein_id=RUP89063.1;transl_table=11 RBME01000005.1 Genbank gene 19260 23018 . - . ID=gene-D8M40_05335;Name=D8M40_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05335 RBME01000005.1 Protein Homology CDS 19260 23018 . - 0 ID=cds-RUP89064.1;Parent=gene-D8M40_05335;Dbxref=NCBI_GP:RUP89064.1;Name=RUP89064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011897089.1;locus_tag=D8M40_05335;product=nitrate reductase subunit alpha;protein_id=RUP89064.1;transl_table=11 RBME01000005.1 Genbank gene 23038 24363 . - . ID=gene-D8M40_05340;Name=D8M40_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05340 RBME01000005.1 Protein Homology CDS 23038 24363 . - 0 ID=cds-RUP89065.1;Parent=gene-D8M40_05340;Dbxref=NCBI_GP:RUP89065.1;Name=RUP89065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280182.1;locus_tag=D8M40_05340;product=NarK/NasA family nitrate transporter;protein_id=RUP89065.1;transl_table=11 RBME01000005.1 Genbank gene 24593 25075 . + . ID=gene-D8M40_05345;Name=D8M40_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05345 RBME01000005.1 Protein Homology CDS 24593 25075 . + 0 ID=cds-RUP89066.1;Parent=gene-D8M40_05345;Dbxref=NCBI_GP:RUP89066.1;Name=RUP89066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120629.1;locus_tag=D8M40_05345;product=molybdopterin biosynthesis protein MoeB;protein_id=RUP89066.1;transl_table=11 RBME01000005.1 Genbank gene 25321 27147 . + . ID=gene-D8M40_05350;Name=D8M40_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05350 RBME01000005.1 Protein Homology CDS 25321 27147 . + 0 ID=cds-RUP89155.1;Parent=gene-D8M40_05350;Dbxref=NCBI_GP:RUP89155.1;Name=RUP89155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769711.1;locus_tag=D8M40_05350;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP89155.1;transl_table=11 RBME01000005.1 Genbank gene 27238 28461 . - . ID=gene-D8M40_05355;Name=D8M40_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05355 RBME01000005.1 Protein Homology CDS 27238 28461 . - 0 ID=cds-RUP89067.1;Parent=gene-D8M40_05355;Dbxref=NCBI_GP:RUP89067.1;Name=RUP89067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02661.16;locus_tag=D8M40_05355;product=Fic family protein;protein_id=RUP89067.1;transl_table=11 RBME01000005.1 Genbank gene 28703 30214 . - . ID=gene-D8M40_05360;Name=D8M40_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05360 RBME01000005.1 GeneMarkS+ CDS 28703 30214 . - 0 ID=cds-RUP89068.1;Parent=gene-D8M40_05360;Dbxref=NCBI_GP:RUP89068.1;Name=RUP89068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05360;product=hypothetical protein;protein_id=RUP89068.1;transl_table=11 RBME01000005.1 Genbank gene 30330 31229 . - . ID=gene-D8M40_05365;Name=D8M40_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05365 RBME01000005.1 Protein Homology CDS 30330 31229 . - 0 ID=cds-RUP89069.1;Parent=gene-D8M40_05365;Dbxref=NCBI_GP:RUP89069.1;Name=RUP89069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120633.1;locus_tag=D8M40_05365;product=anchored repeat-type ABC transporter permease subunit;protein_id=RUP89069.1;transl_table=11 RBME01000005.1 Genbank gene 31229 31957 . - . ID=gene-D8M40_05370;Name=D8M40_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05370 RBME01000005.1 Protein Homology CDS 31229 31957 . - 0 ID=cds-RUP89070.1;Parent=gene-D8M40_05370;Dbxref=NCBI_GP:RUP89070.1;Name=RUP89070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120634.1;locus_tag=D8M40_05370;product=anchored repeat-type ABC transporter ATP-binding subunit;protein_id=RUP89070.1;transl_table=11 RBME01000005.1 Genbank gene 31960 32877 . - . ID=gene-D8M40_05375;Name=D8M40_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05375 RBME01000005.1 Protein Homology CDS 31960 32877 . - 0 ID=cds-RUP89071.1;Parent=gene-D8M40_05375;Dbxref=NCBI_GP:RUP89071.1;Name=RUP89071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120635.1;locus_tag=D8M40_05375;product=peptidase;protein_id=RUP89071.1;transl_table=11 RBME01000005.1 Genbank gene 32961 34535 . - . ID=gene-D8M40_05380;Name=D8M40_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05380 RBME01000005.1 Protein Homology CDS 32961 34535 . - 0 ID=cds-RUP89072.1;Parent=gene-D8M40_05380;Dbxref=NCBI_GP:RUP89072.1;Name=RUP89072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186879.1;locus_tag=D8M40_05380;product=anchored repeat ABC transporter%2C substrate-binding protein;protein_id=RUP89072.1;transl_table=11 RBME01000005.1 Genbank gene 34567 36438 . - . ID=gene-D8M40_05385;Name=D8M40_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05385 RBME01000005.1 Protein Homology CDS 34567 36438 . - 0 ID=cds-RUP89073.1;Parent=gene-D8M40_05385;Dbxref=NCBI_GP:RUP89073.1;Name=RUP89073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120637.1;locus_tag=D8M40_05385;product=cell surface protein;protein_id=RUP89073.1;transl_table=11 RBME01000005.1 Genbank gene 36484 39120 . - . ID=gene-D8M40_05390;Name=D8M40_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05390 RBME01000005.1 Protein Homology CDS 36484 39120 . - 0 ID=cds-RUP89074.1;Parent=gene-D8M40_05390;Dbxref=NCBI_GP:RUP89074.1;Name=RUP89074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03769;locus_tag=D8M40_05390;product=hypothetical protein;protein_id=RUP89074.1;transl_table=11 RBME01000005.1 Genbank gene 39284 42271 . - . ID=gene-D8M40_05395;Name=D8M40_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05395 RBME01000005.1 Protein Homology CDS 39284 42271 . - 0 ID=cds-RUP89075.1;Parent=gene-D8M40_05395;Dbxref=NCBI_GP:RUP89075.1;Name=RUP89075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03769;locus_tag=D8M40_05395;product=hypothetical protein;protein_id=RUP89075.1;transl_table=11 RBME01000005.1 Genbank gene 42522 44156 . - . ID=gene-D8M40_05400;Name=D8M40_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05400 RBME01000005.1 GeneMarkS+ CDS 42522 44156 . - 0 ID=cds-RUP89076.1;Parent=gene-D8M40_05400;Dbxref=NCBI_GP:RUP89076.1;Name=RUP89076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05400;product=hypothetical protein;protein_id=RUP89076.1;transl_table=11 RBME01000005.1 Genbank gene 44204 45145 . - . ID=gene-D8M40_05405;Name=D8M40_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05405 RBME01000005.1 Protein Homology CDS 44204 45145 . - 0 ID=cds-RUP89077.1;Parent=gene-D8M40_05405;Dbxref=NCBI_GP:RUP89077.1;Name=RUP89077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120639.1;locus_tag=D8M40_05405;product=ABC transporter ATP-binding protein;protein_id=RUP89077.1;transl_table=11 RBME01000005.1 Genbank gene 45222 46577 . - . ID=gene-D8M40_05410;Name=D8M40_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05410 RBME01000005.1 Protein Homology CDS 45222 46577 . - 0 ID=cds-RUP89156.1;Parent=gene-D8M40_05410;Dbxref=NCBI_GP:RUP89156.1;Name=RUP89156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005294311.1;locus_tag=D8M40_05410;product=TRAP transporter large permease subunit;protein_id=RUP89156.1;transl_table=11 RBME01000005.1 Genbank gene 48068 49039 . - . ID=gene-D8M40_05415;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=D8M40_05415 RBME01000005.1 Protein Homology CDS 48068 49039 . - 0 ID=cds-RUP89157.1;Parent=gene-D8M40_05415;Dbxref=NCBI_GP:RUP89157.1;Name=RUP89157.1;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006064207.1;locus_tag=D8M40_05415;product=formimidoylglutamase;protein_id=RUP89157.1;transl_table=11 RBME01000005.1 Genbank gene 49491 51032 . + . ID=gene-D8M40_05420;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=D8M40_05420 RBME01000005.1 Protein Homology CDS 49491 51032 . + 0 ID=cds-RUP89158.1;Parent=gene-D8M40_05420;Dbxref=NCBI_GP:RUP89158.1;Name=RUP89158.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006064205.1;locus_tag=D8M40_05420;product=histidine ammonia-lyase;protein_id=RUP89158.1;transl_table=11 RBME01000005.1 Genbank gene 51112 52317 . + . ID=gene-D8M40_05425;Name=D8M40_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05425 RBME01000005.1 Protein Homology CDS 51112 52317 . + 0 ID=cds-RUP89078.1;Parent=gene-D8M40_05425;Dbxref=NCBI_GP:RUP89078.1;Name=RUP89078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018309.1;locus_tag=D8M40_05425;product=imidazolonepropionase;protein_id=RUP89078.1;transl_table=11 RBME01000005.1 Genbank gene 52427 54082 . + . ID=gene-D8M40_05430;Name=D8M40_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05430 RBME01000005.1 Protein Homology CDS 52427 54082 . + 0 ID=cds-RUP89079.1;Parent=gene-D8M40_05430;Dbxref=NCBI_GP:RUP89079.1;Name=RUP89079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325897.1;locus_tag=D8M40_05430;product=anthranilate synthase component 1;protein_id=RUP89079.1;transl_table=11 RBME01000005.1 Genbank gene 54088 54723 . + . ID=gene-D8M40_05435;Name=D8M40_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05435 RBME01000005.1 Protein Homology CDS 54088 54723 . + 0 ID=cds-RUP89159.1;Parent=gene-D8M40_05435;Dbxref=NCBI_GP:RUP89159.1;Name=RUP89159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325896.1;locus_tag=D8M40_05435;product=anthranilate synthase component II;protein_id=RUP89159.1;transl_table=11 RBME01000005.1 Genbank gene 54723 55793 . + . ID=gene-D8M40_05440;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=D8M40_05440 RBME01000005.1 Protein Homology CDS 54723 55793 . + 0 ID=cds-RUP89080.1;Parent=gene-D8M40_05440;Dbxref=NCBI_GP:RUP89080.1;Name=RUP89080.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018369.1;locus_tag=D8M40_05440;product=anthranilate phosphoribosyltransferase;protein_id=RUP89080.1;transl_table=11 RBME01000005.1 Genbank gene 55783 57282 . + . ID=gene-D8M40_05445;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=D8M40_05445 RBME01000005.1 Protein Homology CDS 55783 57282 . + 0 ID=cds-RUP89081.1;Parent=gene-D8M40_05445;Dbxref=NCBI_GP:RUP89081.1;Name=RUP89081.1;gbkey=CDS;gene=trpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402195.1;locus_tag=D8M40_05445;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=RUP89081.1;transl_table=11 RBME01000005.1 Genbank gene 57388 58656 . + . ID=gene-D8M40_05450;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=D8M40_05450 RBME01000005.1 Protein Homology CDS 57388 58656 . + 0 ID=cds-RUP89082.1;Parent=gene-D8M40_05450;Dbxref=NCBI_GP:RUP89082.1;Name=RUP89082.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325892.1;locus_tag=D8M40_05450;product=tryptophan synthase subunit beta;protein_id=RUP89082.1;transl_table=11 RBME01000005.1 Genbank gene 58659 59489 . + . ID=gene-D8M40_05455;Name=D8M40_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05455 RBME01000005.1 Protein Homology CDS 58659 59489 . + 0 ID=cds-RUP89083.1;Parent=gene-D8M40_05455;Dbxref=NCBI_GP:RUP89083.1;Name=RUP89083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188018.1;locus_tag=D8M40_05455;product=tryptophan synthase subunit alpha;protein_id=RUP89083.1;transl_table=11 RBME01000005.1 Genbank gene 59659 60942 . - . ID=gene-D8M40_05460;Name=D8M40_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05460 RBME01000005.1 Protein Homology CDS 59659 60942 . - 0 ID=cds-RUP89084.1;Parent=gene-D8M40_05460;Dbxref=NCBI_GP:RUP89084.1;Name=RUP89084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846976.1;locus_tag=D8M40_05460;product=dicarboxylate/amino acid:cation symporter;protein_id=RUP89084.1;transl_table=11 RBME01000005.1 Genbank gene 61036 61509 . + . ID=gene-D8M40_05465;Name=D8M40_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05465 RBME01000005.1 Protein Homology CDS 61036 61509 . + 0 ID=cds-RUP89085.1;Parent=gene-D8M40_05465;Dbxref=NCBI_GP:RUP89085.1;Name=RUP89085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188031.1;locus_tag=D8M40_05465;product=SdpI family protein;protein_id=RUP89085.1;transl_table=11 RBME01000005.1 Genbank gene 61639 62010 . + . ID=gene-D8M40_05470;Name=D8M40_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05470 RBME01000005.1 Protein Homology CDS 61639 62010 . + 0 ID=cds-RUP89086.1;Parent=gene-D8M40_05470;Dbxref=NCBI_GP:RUP89086.1;Name=RUP89086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005391612.1;locus_tag=D8M40_05470;product=Rieske (2Fe-2S) protein;protein_id=RUP89086.1;transl_table=11 RBME01000005.1 Genbank gene 62065 62373 . + . ID=gene-D8M40_05475;Name=D8M40_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05475 RBME01000005.1 Protein Homology CDS 62065 62373 . + 0 ID=cds-RUP89087.1;Parent=gene-D8M40_05475;Dbxref=NCBI_GP:RUP89087.1;Name=RUP89087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530730.1;locus_tag=D8M40_05475;product=hypothetical protein;protein_id=RUP89087.1;transl_table=11 RBME01000005.1 Genbank gene 62394 62741 . - . ID=gene-D8M40_05480;Name=D8M40_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05480 RBME01000005.1 Protein Homology CDS 62394 62741 . - 0 ID=cds-RUP89088.1;Parent=gene-D8M40_05480;Dbxref=NCBI_GP:RUP89088.1;Name=RUP89088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298178.1;locus_tag=D8M40_05480;product=branched-chain amino acid ABC transporter permease;protein_id=RUP89088.1;transl_table=11 RBME01000005.1 Genbank gene 62741 63487 . - . ID=gene-D8M40_05485;Name=D8M40_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05485 RBME01000005.1 Protein Homology CDS 62741 63487 . - 0 ID=cds-RUP89089.1;Parent=gene-D8M40_05485;Dbxref=NCBI_GP:RUP89089.1;Name=RUP89089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652427.1;locus_tag=D8M40_05485;product=branched-chain amino acid ABC transporter permease;protein_id=RUP89089.1;transl_table=11 RBME01000005.1 Genbank gene 63488 64948 . - . ID=gene-D8M40_05490;Name=D8M40_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05490 RBME01000005.1 Protein Homology CDS 63488 64948 . - 0 ID=cds-RUP89090.1;Parent=gene-D8M40_05490;Dbxref=NCBI_GP:RUP89090.1;Name=RUP89090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325864.1;locus_tag=D8M40_05490;product=CCA tRNA nucleotidyltransferase;protein_id=RUP89090.1;transl_table=11 RBME01000005.1 Genbank gene 64977 65798 . + . ID=gene-D8M40_05495;Name=D8M40_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05495 RBME01000005.1 Protein Homology CDS 64977 65798 . + 0 ID=cds-RUP89091.1;Parent=gene-D8M40_05495;Dbxref=NCBI_GP:RUP89091.1;Name=RUP89091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120658.1;locus_tag=D8M40_05495;product=NUDIX domain-containing protein;protein_id=RUP89091.1;transl_table=11 RBME01000005.1 Genbank gene 65795 68188 . + . ID=gene-D8M40_05500;Name=D8M40_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05500 RBME01000005.1 GeneMarkS+ CDS 65795 68188 . + 0 ID=cds-RUP89092.1;Parent=gene-D8M40_05500;Dbxref=NCBI_GP:RUP89092.1;Name=RUP89092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05500;product=hypothetical protein;protein_id=RUP89092.1;transl_table=11 RBME01000005.1 Genbank gene 68204 71767 . + . ID=gene-D8M40_05505;Name=D8M40_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05505 RBME01000005.1 Protein Homology CDS 68204 71767 . + 0 ID=cds-RUP89093.1;Parent=gene-D8M40_05505;Dbxref=NCBI_GP:RUP89093.1;Name=RUP89093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120660.1;locus_tag=D8M40_05505;product=murein biosynthesis protein MurJ;protein_id=RUP89093.1;transl_table=11 RBME01000005.1 Genbank gene 71969 72613 . + . ID=gene-D8M40_05510;Name=D8M40_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05510 RBME01000005.1 Protein Homology CDS 71969 72613 . + 0 ID=cds-RUP89094.1;Parent=gene-D8M40_05510;Dbxref=NCBI_GP:RUP89094.1;Name=RUP89094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530716.1;locus_tag=D8M40_05510;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP89094.1;transl_table=11 RBME01000005.1 Genbank gene 72754 73677 . + . ID=gene-D8M40_05515;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=D8M40_05515 RBME01000005.1 Protein Homology CDS 72754 73677 . + 0 ID=cds-RUP89095.1;Parent=gene-D8M40_05515;Dbxref=NCBI_GP:RUP89095.1;Name=RUP89095.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847020.1;locus_tag=D8M40_05515;product=thioredoxin-disulfide reductase;protein_id=RUP89095.1;transl_table=11 RBME01000005.1 Genbank gene 73802 74125 . + . ID=gene-D8M40_05520;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D8M40_05520 RBME01000005.1 Protein Homology CDS 73802 74125 . + 0 ID=cds-RUP89096.1;Parent=gene-D8M40_05520;Dbxref=NCBI_GP:RUP89096.1;Name=RUP89096.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602283.1;locus_tag=D8M40_05520;product=thioredoxin;protein_id=RUP89096.1;transl_table=11 RBME01000005.1 Genbank gene 74227 75411 . + . ID=gene-D8M40_05525;Name=D8M40_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05525 RBME01000005.1 Protein Homology CDS 74227 75411 . + 0 ID=cds-RUP89097.1;Parent=gene-D8M40_05525;Dbxref=NCBI_GP:RUP89097.1;Name=RUP89097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188064.1;locus_tag=D8M40_05525;product=N-acetylmuramoyl-L-alanine amidase;protein_id=RUP89097.1;transl_table=11 RBME01000005.1 Genbank gene 75501 76721 . - . ID=gene-D8M40_05530;Name=D8M40_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05530 RBME01000005.1 Protein Homology CDS 75501 76721 . - 0 ID=cds-RUP89098.1;Parent=gene-D8M40_05530;Dbxref=NCBI_GP:RUP89098.1;Name=RUP89098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847028.1;locus_tag=D8M40_05530;product=ParB/RepB/Spo0J family partition protein;protein_id=RUP89098.1;transl_table=11 RBME01000005.1 Genbank gene 76737 77690 . - . ID=gene-D8M40_05535;Name=D8M40_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05535 RBME01000005.1 Protein Homology CDS 76737 77690 . - 0 ID=cds-RUP89099.1;Parent=gene-D8M40_05535;Dbxref=NCBI_GP:RUP89099.1;Name=RUP89099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530704.1;locus_tag=D8M40_05535;product=ParA family protein;protein_id=RUP89099.1;transl_table=11 RBME01000005.1 Genbank gene 77701 78303 . - . ID=gene-D8M40_05540;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=D8M40_05540 RBME01000005.1 Protein Homology CDS 77701 78303 . - 0 ID=cds-RUP89100.1;Parent=gene-D8M40_05540;Dbxref=NCBI_GP:RUP89100.1;Name=RUP89100.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120667.1;locus_tag=D8M40_05540;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=RUP89100.1;transl_table=11 RBME01000005.1 Genbank gene 78303 79358 . - . ID=gene-D8M40_05545;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D8M40_05545 RBME01000005.1 Protein Homology CDS 78303 79358 . - 0 ID=cds-RUP89101.1;Parent=gene-D8M40_05545;Dbxref=NCBI_GP:RUP89101.1;Name=RUP89101.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022379.1;locus_tag=D8M40_05545;product=membrane protein insertase YidC;protein_id=RUP89101.1;transl_table=11 RBME01000005.1 Genbank gene 79368 79682 . - . ID=gene-D8M40_05550;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D8M40_05550 RBME01000005.1 Protein Homology CDS 79368 79682 . - 0 ID=cds-RUP89102.1;Parent=gene-D8M40_05550;Dbxref=NCBI_GP:RUP89102.1;Name=RUP89102.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017219.1;locus_tag=D8M40_05550;product=membrane protein insertion efficiency factor YidD;protein_id=RUP89102.1;transl_table=11 RBME01000005.1 Genbank gene 79679 80071 . - . ID=gene-D8M40_05555;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=D8M40_05555 RBME01000005.1 Protein Homology CDS 79679 80071 . - 0 ID=cds-RUP89103.1;Parent=gene-D8M40_05555;Dbxref=NCBI_GP:RUP89103.1;Name=RUP89103.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004601685.1;locus_tag=D8M40_05555;product=ribonuclease P protein component;protein_id=RUP89103.1;transl_table=11 RBME01000005.1 Genbank gene 80075 80218 . - . ID=gene-D8M40_05560;Name=D8M40_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05560 RBME01000005.1 Protein Homology CDS 80075 80218 . - 0 ID=cds-RUP89104.1;Parent=gene-D8M40_05560;Dbxref=NCBI_GP:RUP89104.1;Name=RUP89104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003890928.1;locus_tag=D8M40_05560;product=50S ribosomal protein L34;protein_id=RUP89104.1;transl_table=11 RBME01000005.1 Genbank gene 81061 82842 . + . ID=gene-D8M40_05565;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=D8M40_05565 RBME01000005.1 Protein Homology CDS 81061 82842 . + 0 ID=cds-RUP89105.1;Parent=gene-D8M40_05565;Dbxref=NCBI_GP:RUP89105.1;Name=RUP89105.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120671.1;locus_tag=D8M40_05565;product=chromosomal replication initiator protein DnaA;protein_id=RUP89105.1;transl_table=11 RBME01000005.1 Genbank gene 83613 84800 . + . ID=gene-D8M40_05570;Name=D8M40_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05570 RBME01000005.1 Protein Homology CDS 83613 84800 . + 0 ID=cds-RUP89106.1;Parent=gene-D8M40_05570;Dbxref=NCBI_GP:RUP89106.1;Name=RUP89106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276004.1;locus_tag=D8M40_05570;product=DNA polymerase III subunit beta;protein_id=RUP89106.1;transl_table=11 RBME01000005.1 Genbank gene 84800 86083 . + . ID=gene-D8M40_05575;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=D8M40_05575 RBME01000005.1 Protein Homology CDS 84800 86083 . + 0 ID=cds-RUP89107.1;Parent=gene-D8M40_05575;Dbxref=NCBI_GP:RUP89107.1;Name=RUP89107.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120673.1;locus_tag=D8M40_05575;product=DNA replication/repair protein RecF;protein_id=RUP89107.1;transl_table=11 RBME01000005.1 Genbank gene 86086 86814 . + . ID=gene-D8M40_05580;Name=D8M40_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05580 RBME01000005.1 Protein Homology CDS 86086 86814 . + 0 ID=cds-RUP89108.1;Parent=gene-D8M40_05580;Dbxref=NCBI_GP:RUP89108.1;Name=RUP89108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118151.1;locus_tag=D8M40_05580;product=DUF721 domain-containing protein;protein_id=RUP89108.1;transl_table=11 RBME01000005.1 Genbank gene 86972 88999 . + . ID=gene-D8M40_05585;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=D8M40_05585 RBME01000005.1 Protein Homology CDS 86972 88999 . + 0 ID=cds-RUP89109.1;Parent=gene-D8M40_05585;Dbxref=NCBI_GP:RUP89109.1;Name=RUP89109.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599257.1;locus_tag=D8M40_05585;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=RUP89109.1;transl_table=11 RBME01000005.1 Genbank gene 89090 89980 . + . ID=gene-D8M40_05590;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=D8M40_05590 RBME01000005.1 Protein Homology CDS 89090 89980 . + 0 ID=cds-RUP89110.1;Parent=gene-D8M40_05590;Dbxref=NCBI_GP:RUP89110.1;Name=RUP89110.1;gbkey=CDS;gene=pdxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120676.1;locus_tag=D8M40_05590;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=RUP89110.1;transl_table=11 RBME01000005.1 Genbank gene 90060 90242 . - . ID=gene-D8M40_05595;Name=D8M40_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05595 RBME01000005.1 GeneMarkS+ CDS 90060 90242 . - 0 ID=cds-RUP89111.1;Parent=gene-D8M40_05595;Dbxref=NCBI_GP:RUP89111.1;Name=RUP89111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05595;product=hypothetical protein;protein_id=RUP89111.1;transl_table=11 RBME01000005.1 Genbank gene 90432 93050 . + . ID=gene-D8M40_05600;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=D8M40_05600 RBME01000005.1 Protein Homology CDS 90432 93050 . + 0 ID=cds-RUP89112.1;Parent=gene-D8M40_05600;Dbxref=NCBI_GP:RUP89112.1;Name=RUP89112.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120678.1;locus_tag=D8M40_05600;product=DNA gyrase subunit A;protein_id=RUP89112.1;transl_table=11 RBME01000005.1 Genbank gene 93059 93409 . + . ID=gene-D8M40_05605;Name=D8M40_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05605 RBME01000005.1 Protein Homology CDS 93059 93409 . + 0 ID=cds-RUP89113.1;Parent=gene-D8M40_05605;Dbxref=NCBI_GP:RUP89113.1;Name=RUP89113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340589.1;locus_tag=D8M40_05605;product=DUF3566 domain-containing protein;protein_id=RUP89113.1;transl_table=11 RBME01000005.1 Genbank gene 93489 93565 . + . ID=gene-D8M40_05610;Name=D8M40_05610;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_05610 RBME01000005.1 tRNAscan-SE tRNA 93489 93565 . + . ID=rna-D8M40_05610;Parent=gene-D8M40_05610;anticodon=(pos:93523..93525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05610;product=tRNA-Ile RBME01000005.1 tRNAscan-SE exon 93489 93565 . + . ID=exon-D8M40_05610-1;Parent=rna-D8M40_05610;anticodon=(pos:93523..93525);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05610;product=tRNA-Ile RBME01000005.1 Genbank gene 93577 93649 . + . ID=gene-D8M40_05615;Name=D8M40_05615;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_05615 RBME01000005.1 tRNAscan-SE tRNA 93577 93649 . + . ID=rna-D8M40_05615;Parent=gene-D8M40_05615;anticodon=(pos:93610..93612);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05615;product=tRNA-Ala RBME01000005.1 tRNAscan-SE exon 93577 93649 . + . ID=exon-D8M40_05615-1;Parent=rna-D8M40_05615;anticodon=(pos:93610..93612);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05615;product=tRNA-Ala RBME01000005.1 Genbank gene 93713 93946 . + . ID=gene-D8M40_05620;Name=D8M40_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05620 RBME01000005.1 Protein Homology CDS 93713 93946 . + 0 ID=cds-RUP89114.1;Parent=gene-D8M40_05620;Dbxref=NCBI_GP:RUP89114.1;Name=RUP89114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006130669.1;locus_tag=D8M40_05620;product=hypothetical protein;protein_id=RUP89114.1;transl_table=11 RBME01000005.1 Genbank gene 94534 95130 . - . ID=gene-D8M40_05625;Name=D8M40_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05625 RBME01000005.1 Protein Homology CDS 94534 95130 . - 0 ID=cds-RUP89115.1;Parent=gene-D8M40_05625;Dbxref=NCBI_GP:RUP89115.1;Name=RUP89115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600135.1;locus_tag=D8M40_05625;product=cadmium transporter;protein_id=RUP89115.1;transl_table=11 RBME01000005.1 Genbank gene 95131 95490 . - . ID=gene-D8M40_05630;Name=D8M40_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05630 RBME01000005.1 Protein Homology CDS 95131 95490 . - 0 ID=cds-RUP89116.1;Parent=gene-D8M40_05630;Dbxref=NCBI_GP:RUP89116.1;Name=RUP89116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839590.1;locus_tag=D8M40_05630;product=ArsR family transcriptional regulator;protein_id=RUP89116.1;transl_table=11 RBME01000005.1 Genbank pseudogene 96005 96655 . + . ID=gene-D8M40_05635;Name=D8M40_05635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05635;pseudo=true RBME01000005.1 Protein Homology CDS 96005 96655 . + 0 ID=cds-D8M40_05635;Parent=gene-D8M40_05635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_099156038.1;locus_tag=D8M40_05635;product=IS6 family transposase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 96908 97558 . - . ID=gene-D8M40_05640;Name=D8M40_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05640 RBME01000005.1 Protein Homology CDS 96908 97558 . - 0 ID=cds-RUP89117.1;Parent=gene-D8M40_05640;Dbxref=NCBI_GP:RUP89117.1;Name=RUP89117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770482.1;locus_tag=D8M40_05640;product=vitamin K epoxide reductase family protein;protein_id=RUP89117.1;transl_table=11 RBME01000005.1 Genbank gene 97568 98275 . - . ID=gene-D8M40_05645;Name=D8M40_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05645 RBME01000005.1 Protein Homology CDS 97568 98275 . - 0 ID=cds-RUP89118.1;Parent=gene-D8M40_05645;Dbxref=NCBI_GP:RUP89118.1;Name=RUP89118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015453104.1;locus_tag=D8M40_05645;product=disulfide bond formation protein DsbA;protein_id=RUP89118.1;transl_table=11 RBME01000005.1 Genbank gene 98380 98709 . - . ID=gene-D8M40_05650;Name=D8M40_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05650 RBME01000005.1 Protein Homology CDS 98380 98709 . - 0 ID=cds-RUP89119.1;Parent=gene-D8M40_05650;Dbxref=NCBI_GP:RUP89119.1;Name=RUP89119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402255.1;locus_tag=D8M40_05650;product=ArsR family transcriptional regulator;protein_id=RUP89119.1;transl_table=11 RBME01000005.1 Genbank gene 98853 99644 . - . ID=gene-D8M40_05655;Name=D8M40_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05655 RBME01000005.1 Protein Homology CDS 98853 99644 . - 0 ID=cds-RUP89120.1;Parent=gene-D8M40_05655;Dbxref=NCBI_GP:RUP89120.1;Name=RUP89120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841217.1;locus_tag=D8M40_05655;product=M23 family metallopeptidase;protein_id=RUP89120.1;transl_table=11 RBME01000005.1 Genbank pseudogene 100011 102054 . - . ID=gene-D8M40_05660;Name=D8M40_05660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05660;pseudo=true RBME01000005.1 Protein Homology CDS 100011 102054 . - 0 ID=cds-D8M40_05660;Parent=gene-D8M40_05660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847987.1;locus_tag=D8M40_05660;product=copper resistance protein;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 102312 102896 . + . ID=gene-D8M40_05665;Name=D8M40_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05665 RBME01000005.1 Protein Homology CDS 102312 102896 . + 0 ID=cds-RUP89121.1;Parent=gene-D8M40_05665;Dbxref=NCBI_GP:RUP89121.1;Name=RUP89121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860216.1;locus_tag=D8M40_05665;product=copper resistance protein CopC;protein_id=RUP89121.1;transl_table=11 RBME01000005.1 Genbank gene 103073 103438 . + . ID=gene-D8M40_05670;Name=D8M40_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05670 RBME01000005.1 Protein Homology CDS 103073 103438 . + 0 ID=cds-RUP89122.1;Parent=gene-D8M40_05670;Dbxref=NCBI_GP:RUP89122.1;Name=RUP89122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847982.1;locus_tag=D8M40_05670;product=ArsR family transcriptional regulator;protein_id=RUP89122.1;transl_table=11 RBME01000005.1 Genbank gene 103435 105408 . + . ID=gene-D8M40_05675;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=D8M40_05675 RBME01000005.1 Protein Homology CDS 103435 105408 . + 0 ID=cds-RUP89123.1;Parent=gene-D8M40_05675;Dbxref=NCBI_GP:RUP89123.1;Name=RUP89123.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860212.1;locus_tag=D8M40_05675;product=cadmium-translocating P-type ATPase;protein_id=RUP89123.1;transl_table=11 RBME01000005.1 Genbank pseudogene 105472 106511 . + . ID=gene-D8M40_05680;Name=D8M40_05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05680;pseudo=true RBME01000005.1 Protein Homology CDS 105472 106511 . + 0 ID=cds-D8M40_05680;Parent=gene-D8M40_05680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841230.1;locus_tag=D8M40_05680;product=SURF1 family protein;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 106634 107542 . + . ID=gene-D8M40_05685;Name=D8M40_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05685 RBME01000005.1 Protein Homology CDS 106634 107542 . + 0 ID=cds-RUP89124.1;Parent=gene-D8M40_05685;Dbxref=NCBI_GP:RUP89124.1;Name=RUP89124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295729.1;locus_tag=D8M40_05685;product=cation transporter;protein_id=RUP89124.1;transl_table=11 RBME01000005.1 Genbank gene 107676 108215 . - . ID=gene-D8M40_05690;Name=D8M40_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05690 RBME01000005.1 Protein Homology CDS 107676 108215 . - 0 ID=cds-RUP89125.1;Parent=gene-D8M40_05690;Dbxref=NCBI_GP:RUP89125.1;Name=RUP89125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458765.1;locus_tag=D8M40_05690;product=DinB family protein;protein_id=RUP89125.1;transl_table=11 RBME01000005.1 Genbank pseudogene 108383 108520 . - . ID=gene-D8M40_05695;Name=D8M40_05695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05695;pseudo=true RBME01000005.1 Protein Homology CDS 108383 108520 . - 0 ID=cds-D8M40_05695;Parent=gene-D8M40_05695;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002546817.1;locus_tag=D8M40_05695;product=cadmium transporter;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 108607 109215 . + . ID=gene-D8M40_05700;Name=D8M40_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05700 RBME01000005.1 Protein Homology CDS 108607 109215 . + 0 ID=cds-RUP89126.1;Parent=gene-D8M40_05700;Dbxref=NCBI_GP:RUP89126.1;Name=RUP89126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821861.1;locus_tag=D8M40_05700;product=recombinase family protein;protein_id=RUP89126.1;transl_table=11 RBME01000005.1 Genbank pseudogene 109554 110501 . - . ID=gene-D8M40_05705;Name=D8M40_05705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05705;pseudo=true RBME01000005.1 Protein Homology CDS 109554 110501 . - 0 ID=cds-D8M40_05705;Parent=gene-D8M40_05705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013170012.1;locus_tag=D8M40_05705;product=IS3 family transposase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 110590 112071 . - . ID=gene-D8M40_05710;Name=D8M40_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05710 RBME01000005.1 Protein Homology CDS 110590 112071 . - 0 ID=cds-RUP89127.1;Parent=gene-D8M40_05710;Dbxref=NCBI_GP:RUP89127.1;Name=RUP89127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602158.1;locus_tag=D8M40_05710;product=multicopper oxidase family protein;protein_id=RUP89127.1;transl_table=11 RBME01000005.1 Genbank gene 112143 112718 . - . ID=gene-D8M40_05715;Name=D8M40_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05715 RBME01000005.1 Protein Homology CDS 112143 112718 . - 0 ID=cds-RUP89128.1;Parent=gene-D8M40_05715;Dbxref=NCBI_GP:RUP89128.1;Name=RUP89128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006284600.1;locus_tag=D8M40_05715;product=hypothetical protein;protein_id=RUP89128.1;transl_table=11 RBME01000005.1 Genbank gene 113123 113845 . + . ID=gene-D8M40_05720;Name=D8M40_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05720 RBME01000005.1 Protein Homology CDS 113123 113845 . + 0 ID=cds-RUP89160.1;Parent=gene-D8M40_05720;Dbxref=NCBI_GP:RUP89160.1;Name=RUP89160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602156.1;locus_tag=D8M40_05720;product=DNA-binding response regulator;protein_id=RUP89160.1;transl_table=11 RBME01000005.1 Genbank gene 113842 114969 . + . ID=gene-D8M40_05725;Name=D8M40_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05725 RBME01000005.1 Protein Homology CDS 113842 114969 . + 0 ID=cds-RUP89129.1;Parent=gene-D8M40_05725;Dbxref=NCBI_GP:RUP89129.1;Name=RUP89129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840783.1;locus_tag=D8M40_05725;product=sensor histidine kinase;protein_id=RUP89129.1;transl_table=11 RBME01000005.1 Genbank gene 115084 115410 . + . ID=gene-D8M40_05730;Name=D8M40_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05730 RBME01000005.1 Protein Homology CDS 115084 115410 . + 0 ID=cds-RUP89130.1;Parent=gene-D8M40_05730;Dbxref=NCBI_GP:RUP89130.1;Name=RUP89130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010933983.1;locus_tag=D8M40_05730;product=copper chaperone;protein_id=RUP89130.1;transl_table=11 RBME01000005.1 Genbank gene 115462 117651 . + . ID=gene-D8M40_05735;Name=D8M40_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05735 RBME01000005.1 Protein Homology CDS 115462 117651 . + 0 ID=cds-RUP89131.1;Parent=gene-D8M40_05735;Dbxref=NCBI_GP:RUP89131.1;Name=RUP89131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020309512.1;locus_tag=D8M40_05735;product=copper-translocating P-type ATPase;protein_id=RUP89131.1;transl_table=11 RBME01000005.1 Genbank gene 117699 118313 . + . ID=gene-D8M40_05740;Name=D8M40_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05740 RBME01000005.1 Protein Homology CDS 117699 118313 . + 0 ID=cds-RUP89132.1;Parent=gene-D8M40_05740;Dbxref=NCBI_GP:RUP89132.1;Name=RUP89132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276111.1;locus_tag=D8M40_05740;product=DUF1541 domain-containing protein;protein_id=RUP89132.1;transl_table=11 RBME01000005.1 Genbank pseudogene 118581 118733 . + . ID=gene-D8M40_05745;Name=D8M40_05745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05745;pseudo=true RBME01000005.1 Protein Homology CDS 118581 118733 . + 0 ID=cds-D8M40_05745;Parent=gene-D8M40_05745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1;locus_tag=D8M40_05745;product=IS6 family transposase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 118899 119204 . + . ID=gene-D8M40_05750;Name=D8M40_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05750 RBME01000005.1 GeneMarkS+ CDS 118899 119204 . + 0 ID=cds-RUP89133.1;Parent=gene-D8M40_05750;Dbxref=NCBI_GP:RUP89133.1;Name=RUP89133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05750;product=hypothetical protein;protein_id=RUP89133.1;transl_table=11 RBME01000005.1 Genbank gene 120018 121238 . + . ID=gene-D8M40_05755;Name=D8M40_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05755 RBME01000005.1 Protein Homology CDS 120018 121238 . + 0 ID=cds-RUP89161.1;Parent=gene-D8M40_05755;Dbxref=NCBI_GP:RUP89161.1;Name=RUP89161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840417.1;locus_tag=D8M40_05755;product=ATP-binding protein;protein_id=RUP89161.1;transl_table=11 RBME01000005.1 Genbank gene 121274 122416 . - . ID=gene-D8M40_05760;Name=D8M40_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05760 RBME01000005.1 Protein Homology CDS 121274 122416 . - 0 ID=cds-RUP89134.1;Parent=gene-D8M40_05760;Dbxref=NCBI_GP:RUP89134.1;Name=RUP89134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120339.1;locus_tag=D8M40_05760;product=glycosyltransferase family 1 protein;protein_id=RUP89134.1;transl_table=11 RBME01000005.1 Genbank gene 122426 122638 . - . ID=gene-D8M40_05765;Name=D8M40_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05765 RBME01000005.1 GeneMarkS+ CDS 122426 122638 . - 0 ID=cds-RUP89135.1;Parent=gene-D8M40_05765;Dbxref=NCBI_GP:RUP89135.1;Name=RUP89135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05765;product=hypothetical protein;protein_id=RUP89135.1;transl_table=11 RBME01000005.1 Genbank gene 122835 123959 . - . ID=gene-D8M40_05770;Name=D8M40_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05770 RBME01000005.1 GeneMarkS+ CDS 122835 123959 . - 0 ID=cds-RUP89136.1;Parent=gene-D8M40_05770;Dbxref=NCBI_GP:RUP89136.1;Name=RUP89136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05770;product=hypothetical protein;protein_id=RUP89136.1;transl_table=11 RBME01000005.1 Genbank gene 124307 125254 . + . ID=gene-D8M40_05775;Name=D8M40_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05775 RBME01000005.1 Protein Homology CDS 124307 125254 . + 0 ID=cds-RUP89137.1;Parent=gene-D8M40_05775;Dbxref=NCBI_GP:RUP89137.1;Name=RUP89137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188142.1;locus_tag=D8M40_05775;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=RUP89137.1;transl_table=11 RBME01000005.1 Genbank gene 125332 127644 . + . ID=gene-D8M40_05780;Name=D8M40_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05780 RBME01000005.1 Protein Homology CDS 125332 127644 . + 0 ID=cds-RUP89138.1;Parent=gene-D8M40_05780;Dbxref=NCBI_GP:RUP89138.1;Name=RUP89138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120334.1;locus_tag=D8M40_05780;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=RUP89138.1;transl_table=11 RBME01000005.1 Genbank gene 127655 128749 . - . ID=gene-D8M40_05785;Name=D8M40_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05785 RBME01000005.1 Protein Homology CDS 127655 128749 . - 0 ID=cds-RUP89139.1;Parent=gene-D8M40_05785;Dbxref=NCBI_GP:RUP89139.1;Name=RUP89139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03631.13;locus_tag=D8M40_05785;product=YihY/virulence factor BrkB family protein;protein_id=RUP89139.1;transl_table=11 RBME01000005.1 Genbank gene 128922 129452 . + . ID=gene-D8M40_05790;Name=D8M40_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05790 RBME01000005.1 Protein Homology CDS 128922 129452 . + 0 ID=cds-RUP89140.1;Parent=gene-D8M40_05790;Dbxref=NCBI_GP:RUP89140.1;Name=RUP89140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005292634.1;locus_tag=D8M40_05790;product=peptidylprolyl isomerase;protein_id=RUP89140.1;transl_table=11 RBME01000005.1 Genbank gene 130041 131231 . - . ID=gene-D8M40_05795;Name=D8M40_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05795 RBME01000005.1 GeneMarkS+ CDS 130041 131231 . - 0 ID=cds-RUP89141.1;Parent=gene-D8M40_05795;Dbxref=NCBI_GP:RUP89141.1;Name=RUP89141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05795;product=hypothetical protein;protein_id=RUP89141.1;transl_table=11 RBME01000005.1 Genbank gene 131231 131755 . - . ID=gene-D8M40_05800;Name=D8M40_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05800 RBME01000005.1 Protein Homology CDS 131231 131755 . - 0 ID=cds-RUP89142.1;Parent=gene-D8M40_05800;Dbxref=NCBI_GP:RUP89142.1;Name=RUP89142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120330.1;locus_tag=D8M40_05800;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP89142.1;transl_table=11 RBME01000005.1 Genbank gene 131822 132205 . - . ID=gene-D8M40_05805;Name=D8M40_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05805 RBME01000005.1 GeneMarkS+ CDS 131822 132205 . - 0 ID=cds-RUP89143.1;Parent=gene-D8M40_05805;Dbxref=NCBI_GP:RUP89143.1;Name=RUP89143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05805;product=hypothetical protein;protein_id=RUP89143.1;transl_table=11 RBME01000005.1 Genbank gene 132392 132793 . + . ID=gene-D8M40_05810;Name=D8M40_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05810 RBME01000005.1 Protein Homology CDS 132392 132793 . + 0 ID=cds-RUP89144.1;Parent=gene-D8M40_05810;Dbxref=NCBI_GP:RUP89144.1;Name=RUP89144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120328.1;locus_tag=D8M40_05810;product=GntR family transcriptional regulator;protein_id=RUP89144.1;transl_table=11 RBME01000005.1 Genbank gene 132796 133611 . + . ID=gene-D8M40_05815;Name=D8M40_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05815 RBME01000005.1 GeneMarkS+ CDS 132796 133611 . + 0 ID=cds-RUP89145.1;Parent=gene-D8M40_05815;Dbxref=NCBI_GP:RUP89145.1;Name=RUP89145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05815;product=hypothetical protein;protein_id=RUP89145.1;transl_table=11 RBME01000005.1 Genbank gene 133687 134319 . + . ID=gene-D8M40_05820;Name=D8M40_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05820 RBME01000005.1 GeneMarkS+ CDS 133687 134319 . + 0 ID=cds-RUP89146.1;Parent=gene-D8M40_05820;Dbxref=NCBI_GP:RUP89146.1;Name=RUP89146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05820;product=hypothetical protein;protein_id=RUP89146.1;transl_table=11 RBME01000005.1 Genbank gene 134338 134610 . - . ID=gene-D8M40_05825;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=D8M40_05825 RBME01000005.1 Protein Homology CDS 134338 134610 . - 0 ID=cds-RUP89147.1;Parent=gene-D8M40_05825;Dbxref=NCBI_GP:RUP89147.1;Name=RUP89147.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120325.1;locus_tag=D8M40_05825;product=cell division protein CrgA;protein_id=RUP89147.1;transl_table=11 RBME01000005.1 Genbank gene 134756 136819 . - . ID=gene-D8M40_05830;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=D8M40_05830 RBME01000005.1 Protein Homology CDS 134756 136819 . - 0 ID=cds-RUP89148.1;Parent=gene-D8M40_05830;Dbxref=NCBI_GP:RUP89148.1;Name=RUP89148.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120324.1;locus_tag=D8M40_05830;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=RUP89148.1;transl_table=11 RBME01000005.1 Genbank pseudogene 137731 138657 . - . ID=gene-D8M40_05835;Name=D8M40_05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_05835;pseudo=true RBME01000005.1 Protein Homology CDS 137731 138657 . - 0 ID=cds-D8M40_05835;Parent=gene-D8M40_05835;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188175.1;locus_tag=D8M40_05835;product=serine/threonine protein kinase;pseudo=true;transl_table=11 RBME01000005.1 Genbank gene 138661 140088 . - . ID=gene-D8M40_05840;Name=D8M40_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05840 RBME01000005.1 Protein Homology CDS 138661 140088 . - 0 ID=cds-RUP89149.1;Parent=gene-D8M40_05840;Dbxref=NCBI_GP:RUP89149.1;Name=RUP89149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846619.1;locus_tag=D8M40_05840;product=penicillin-binding protein 2;protein_id=RUP89149.1;transl_table=11 RBME01000005.1 Genbank gene 140085 141533 . - . ID=gene-D8M40_05845;Name=D8M40_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05845 RBME01000005.1 Protein Homology CDS 140085 141533 . - 0 ID=cds-RUP89150.1;Parent=gene-D8M40_05845;Dbxref=NCBI_GP:RUP89150.1;Name=RUP89150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120322.1;locus_tag=D8M40_05845;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=RUP89150.1;transl_table=11 RBME01000005.1 Genbank gene 141534 142982 . - . ID=gene-D8M40_05850;Name=D8M40_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05850 RBME01000005.1 Protein Homology CDS 141534 142982 . - 0 ID=cds-RUP89151.1;Parent=gene-D8M40_05850;Dbxref=NCBI_GP:RUP89151.1;Name=RUP89151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120321.1;locus_tag=D8M40_05850;product=serine/threonine-protein phosphatase;protein_id=RUP89151.1;transl_table=11 RBME01000005.1 Genbank gene 142983 143450 . - . ID=gene-D8M40_05855;Name=D8M40_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05855 RBME01000005.1 Protein Homology CDS 142983 143450 . - 0 ID=cds-RUP89152.1;Parent=gene-D8M40_05855;Dbxref=NCBI_GP:RUP89152.1;Name=RUP89152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399466.1;locus_tag=D8M40_05855;product=FHA domain-containing protein;protein_id=RUP89152.1;transl_table=11 RBME01000005.1 Genbank gene 143479 144390 . - . ID=gene-D8M40_05860;Name=D8M40_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05860 RBME01000005.1 Protein Homology CDS 143479 144390 . - 0 ID=cds-RUP89153.1;Parent=gene-D8M40_05860;Dbxref=NCBI_GP:RUP89153.1;Name=RUP89153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120319.1;locus_tag=D8M40_05860;product=DUF2662 domain-containing protein;protein_id=RUP89153.1;transl_table=11 RBME01000005.1 Genbank gene 144686 144770 . + . ID=gene-D8M40_05865;Name=D8M40_05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_05865 RBME01000005.1 tRNAscan-SE tRNA 144686 144770 . + . ID=rna-D8M40_05865;Parent=gene-D8M40_05865;anticodon=(pos:144720..144722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05865;product=tRNA-Leu RBME01000005.1 tRNAscan-SE exon 144686 144770 . + . ID=exon-D8M40_05865-1;Parent=rna-D8M40_05865;anticodon=(pos:144720..144722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_05865;product=tRNA-Leu ##sequence-region RBME01000060.1 1 1132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000060.1 Genbank region 1 1132 . + . ID=RBME01000060.1:1..1132;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000060.1 Genbank gene 1 219 . - . ID=gene-D8M40_11585;Name=D8M40_11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11585;partial=true;start_range=.,1 RBME01000060.1 Protein Homology CDS 1 219 . - 0 ID=cds-RUP85907.1;Parent=gene-D8M40_11585;Dbxref=NCBI_GP:RUP85907.1;Name=RUP85907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014716579.1;locus_tag=D8M40_11585;partial=true;product=fimbriae biosynthesis protein;protein_id=RUP85907.1;start_range=.,1;transl_table=11 RBME01000060.1 Genbank gene 216 872 . - . ID=gene-D8M40_11590;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=D8M40_11590 RBME01000060.1 Protein Homology CDS 216 872 . - 0 ID=cds-RUP85906.1;Parent=gene-D8M40_11590;Dbxref=NCBI_GP:RUP85906.1;Name=RUP85906.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015373579.1;locus_tag=D8M40_11590;product=type IV pilus assembly protein PilM;protein_id=RUP85906.1;transl_table=11 ##sequence-region RBME01000061.1 1 1131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000061.1 Genbank region 1 1131 . + . ID=RBME01000061.1:1..1131;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000061.1 Genbank gene 1 335 . + . ID=gene-D8M40_11595;Name=D8M40_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11595;partial=true;start_range=.,1 RBME01000061.1 Protein Homology CDS 1 335 . + 2 ID=cds-RUP85902.1;Parent=gene-D8M40_11595;Dbxref=NCBI_GP:RUP85902.1;Name=RUP85902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_252620.1;locus_tag=D8M40_11595;partial=true;product=methionine ABC transporter substrate-binding protein;protein_id=RUP85902.1;start_range=.,1;transl_table=11 RBME01000061.1 Genbank gene 579 1131 . - . ID=gene-D8M40_11600;Name=rlmJ;end_range=1131,.;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=D8M40_11600;partial=true RBME01000061.1 Protein Homology CDS 579 1131 . - 1 ID=cds-RUP85903.1;Parent=gene-D8M40_11600;Dbxref=NCBI_GP:RUP85903.1;Name=RUP85903.1;end_range=1131,.;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_790253.1;locus_tag=D8M40_11600;partial=true;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=RUP85903.1;transl_table=11 ##sequence-region RBME01000062.1 1 1130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000062.1 Genbank region 1 1130 . + . ID=RBME01000062.1:1..1130;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000062.1 Genbank gene 1 212 . + . ID=gene-D8M40_11605;Name=D8M40_11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11605;partial=true;start_range=.,1 RBME01000062.1 Protein Homology CDS 1 212 . + 2 ID=cds-RUP85899.1;Parent=gene-D8M40_11605;Dbxref=NCBI_GP:RUP85899.1;Name=RUP85899.1;Note=catalyzes the formation of 3-methyl-2-oxobutanoate from 2%2C3%2C-dihydroxy-3-methylbutanoate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_793546.1;locus_tag=D8M40_11605;partial=true;product=dihydroxy-acid dehydratase;protein_id=RUP85899.1;start_range=.,1;transl_table=11 RBME01000062.1 Genbank gene 261 983 . + . ID=gene-D8M40_11610;Name=D8M40_11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11610 RBME01000062.1 Protein Homology CDS 261 983 . + 0 ID=cds-RUP85900.1;Parent=gene-D8M40_11610;Dbxref=NCBI_GP:RUP85900.1;Name=RUP85900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020294812.1;locus_tag=D8M40_11610;product=FadR family transcriptional regulator;protein_id=RUP85900.1;transl_table=11 ##sequence-region RBME01000063.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000063.1 Genbank region 1 1129 . + . ID=RBME01000063.1:1..1129;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000063.1 Genbank gene 1 356 . - . ID=gene-D8M40_11615;Name=D8M40_11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11615;partial=true;start_range=.,1 RBME01000063.1 Protein Homology CDS 1 356 . - 0 ID=cds-RUP85895.1;Parent=gene-D8M40_11615;Dbxref=NCBI_GP:RUP85895.1;Name=RUP85895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019648202.1;locus_tag=D8M40_11615;partial=true;product=tail-specific protease;protein_id=RUP85895.1;start_range=.,1;transl_table=11 RBME01000063.1 Genbank gene 815 1129 . + . ID=gene-D8M40_11620;Name=D8M40_11620;end_range=1129,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11620;partial=true RBME01000063.1 Protein Homology CDS 815 1129 . + 0 ID=cds-RUP85896.1;Parent=gene-D8M40_11620;Dbxref=NCBI_GP:RUP85896.1;Name=RUP85896.1;end_range=1129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008152887.1;locus_tag=D8M40_11620;partial=true;product=ATP-dependent helicase HrpB;protein_id=RUP85896.1;transl_table=11 ##sequence-region RBME01000064.1 1 1127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000064.1 Genbank region 1 1127 . + . ID=RBME01000064.1:1..1127;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000064.1 Genbank gene 1 1127 . + . ID=gene-D8M40_11625;Name=D8M40_11625;end_range=1127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11625;partial=true;start_range=.,1 RBME01000064.1 Protein Homology CDS 1 1127 . + 0 ID=cds-RUP85892.1;Parent=gene-D8M40_11625;Dbxref=NCBI_GP:RUP85892.1;Name=RUP85892.1;end_range=1127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017737263.1;locus_tag=D8M40_11625;partial=true;product=type IV secretion protein Rhs;protein_id=RUP85892.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000065.1 1 1121 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000065.1 Genbank region 1 1121 . + . ID=RBME01000065.1:1..1121;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000065.1 Genbank gene 1 536 . + . ID=gene-D8M40_11630;Name=D8M40_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11630;partial=true;start_range=.,1 RBME01000065.1 Protein Homology CDS 1 536 . + 2 ID=cds-RUP85889.1;Parent=gene-D8M40_11630;Dbxref=NCBI_GP:RUP85889.1;Name=RUP85889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009044365.1;locus_tag=D8M40_11630;partial=true;product=flavodoxin family protein;protein_id=RUP85889.1;start_range=.,1;transl_table=11 RBME01000065.1 Genbank gene 569 1003 . - . ID=gene-D8M40_11635;Name=D8M40_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11635 RBME01000065.1 Protein Homology CDS 569 1003 . - 0 ID=cds-RUP85890.1;Parent=gene-D8M40_11635;Dbxref=NCBI_GP:RUP85890.1;Name=RUP85890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008147893.1;locus_tag=D8M40_11635;product=AraC family transcriptional regulator;protein_id=RUP85890.1;transl_table=11 ##sequence-region RBME01000066.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000066.1 Genbank region 1 1118 . + . ID=RBME01000066.1:1..1118;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000066.1 Genbank gene 210 1118 . - . ID=gene-D8M40_11640;Name=D8M40_11640;end_range=1118,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11640;partial=true RBME01000066.1 Protein Homology CDS 210 1118 . - 0 ID=cds-RUP85888.1;Parent=gene-D8M40_11640;Dbxref=NCBI_GP:RUP85888.1;Name=RUP85888.1;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_790099.1;locus_tag=D8M40_11640;partial=true;product=FAD-binding oxidoreductase;protein_id=RUP85888.1;transl_table=11 ##sequence-region RBME01000067.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000067.1 Genbank region 1 1117 . + . ID=RBME01000067.1:1..1117;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000067.1 Genbank gene 1 1117 . + . ID=gene-D8M40_11645;Name=D8M40_11645;end_range=1117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11645;partial=true;start_range=.,1 RBME01000067.1 Protein Homology CDS 1 1117 . + 2 ID=cds-RUP85885.1;Parent=gene-D8M40_11645;Dbxref=NCBI_GP:RUP85885.1;Name=RUP85885.1;end_range=1117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032655801.1;locus_tag=D8M40_11645;partial=true;product=hypothetical protein;protein_id=RUP85885.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000068.1 1 1109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000068.1 Genbank region 1 1109 . + . ID=RBME01000068.1:1..1109;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000068.1 Genbank gene 1 413 . - . ID=gene-D8M40_11650;Name=D8M40_11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11650;partial=true;start_range=.,1 RBME01000068.1 Protein Homology CDS 1 413 . - 0 ID=cds-RUP85882.1;Parent=gene-D8M40_11650;Dbxref=NCBI_GP:RUP85882.1;Name=RUP85882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016985381.1;locus_tag=D8M40_11650;partial=true;product=aldehyde dehydrogenase family protein;protein_id=RUP85882.1;start_range=.,1;transl_table=11 RBME01000068.1 Genbank gene 568 1109 . + . ID=gene-D8M40_11655;Name=D8M40_11655;end_range=1109,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11655;partial=true RBME01000068.1 Protein Homology CDS 568 1109 . + 0 ID=cds-RUP85883.1;Parent=gene-D8M40_11655;Dbxref=NCBI_GP:RUP85883.1;Name=RUP85883.1;end_range=1109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017526398.1;locus_tag=D8M40_11655;partial=true;product=LysR family transcriptional regulator;protein_id=RUP85883.1;transl_table=11 ##sequence-region RBME01000069.1 1 1103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000069.1 Genbank region 1 1103 . + . ID=RBME01000069.1:1..1103;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000069.1 Genbank gene 73 438 . + . ID=gene-D8M40_11660;Name=D8M40_11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11660 RBME01000069.1 Protein Homology CDS 73 438 . + 0 ID=cds-RUP85790.1;Parent=gene-D8M40_11660;Dbxref=NCBI_GP:RUP85790.1;Name=RUP85790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014308606.1;locus_tag=D8M40_11660;product=IS3 family transposase;protein_id=RUP85790.1;transl_table=11 RBME01000069.1 Genbank pseudogene 363 1103 . + . ID=gene-D8M40_11665;Name=D8M40_11665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11665;pseudo=true RBME01000069.1 Protein Homology CDS 363 1103 . + 0 ID=cds-D8M40_11665;Parent=gene-D8M40_11665;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=D8M40_11665;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region RBME01000006.1 1 129602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000006.1 Genbank region 1 129602 . + . ID=RBME01000006.1:1..129602;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000006.1 Genbank gene 509 2227 . + . ID=gene-D8M40_05870;Name=D8M40_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05870 RBME01000006.1 Protein Homology CDS 509 2227 . + 0 ID=cds-RUP88771.1;Parent=gene-D8M40_05870;Dbxref=NCBI_GP:RUP88771.1;Name=RUP88771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121669.1;locus_tag=D8M40_05870;product=long-chain fatty acid--CoA ligase;protein_id=RUP88771.1;transl_table=11 RBME01000006.1 Genbank gene 2545 4338 . + . ID=gene-D8M40_05875;Name=D8M40_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05875 RBME01000006.1 Protein Homology CDS 2545 4338 . + 0 ID=cds-RUP88772.1;Parent=gene-D8M40_05875;Dbxref=NCBI_GP:RUP88772.1;Name=RUP88772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011074974.1;locus_tag=D8M40_05875;product=long-chain fatty acid--CoA ligase;protein_id=RUP88772.1;transl_table=11 RBME01000006.1 Genbank gene 4556 6460 . + . ID=gene-D8M40_05880;Name=D8M40_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05880 RBME01000006.1 Protein Homology CDS 4556 6460 . + 0 ID=cds-RUP88773.1;Parent=gene-D8M40_05880;Dbxref=NCBI_GP:RUP88773.1;Name=RUP88773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121160.1;locus_tag=D8M40_05880;product=long-chain fatty acid--CoA ligase;protein_id=RUP88773.1;transl_table=11 RBME01000006.1 Genbank gene 6742 7815 . - . ID=gene-D8M40_05885;Name=dnoA;gbkey=Gene;gene=dnoA;gene_biotype=protein_coding;locus_tag=D8M40_05885 RBME01000006.1 Protein Homology CDS 6742 7815 . - 0 ID=cds-RUP88774.1;Parent=gene-D8M40_05885;Dbxref=NCBI_GP:RUP88774.1;Name=RUP88774.1;gbkey=CDS;gene=dnoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121159.1;locus_tag=D8M40_05885;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP88774.1;transl_table=11 RBME01000006.1 Genbank gene 8057 9595 . + . ID=gene-D8M40_05890;Name=dnoB;gbkey=Gene;gene=dnoB;gene_biotype=protein_coding;locus_tag=D8M40_05890 RBME01000006.1 Protein Homology CDS 8057 9595 . + 0 ID=cds-RUP88775.1;Parent=gene-D8M40_05890;Dbxref=NCBI_GP:RUP88775.1;Name=RUP88775.1;gbkey=CDS;gene=dnoB;inference=COORDINATES: protein motif:HMM:PF00282.17;locus_tag=D8M40_05890;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=RUP88775.1;transl_table=11 RBME01000006.1 Genbank gene 9588 11006 . + . ID=gene-D8M40_05895;Name=dnoC;gbkey=Gene;gene=dnoC;gene_biotype=protein_coding;locus_tag=D8M40_05895 RBME01000006.1 Protein Homology CDS 9588 11006 . + 0 ID=cds-RUP88776.1;Parent=gene-D8M40_05895;Dbxref=NCBI_GP:RUP88776.1;Name=RUP88776.1;gbkey=CDS;gene=dnoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121157.1;locus_tag=D8M40_05895;product=L-lysine 6-monooxygenase;protein_id=RUP88776.1;transl_table=11 RBME01000006.1 Genbank gene 10937 13555 . + . ID=gene-D8M40_05900;Name=dnoD;gbkey=Gene;gene=dnoD;gene_biotype=protein_coding;locus_tag=D8M40_05900 RBME01000006.1 Protein Homology CDS 10937 13555 . + 0 ID=cds-RUP88777.1;Parent=gene-D8M40_05900;Dbxref=NCBI_GP:RUP88777.1;Name=RUP88777.1;gbkey=CDS;gene=dnoD;inference=COORDINATES: protein motif:HMM:PF04183.10%2CHMM:PF13523.4;locus_tag=D8M40_05900;product=GNAT family N-acetyltransferase;protein_id=RUP88777.1;transl_table=11 RBME01000006.1 Genbank gene 13666 14727 . + . ID=gene-D8M40_05905;Name=dnoE;gbkey=Gene;gene=dnoE;gene_biotype=protein_coding;locus_tag=D8M40_05905 RBME01000006.1 Protein Homology CDS 13666 14727 . + 0 ID=cds-RUP88778.1;Parent=gene-D8M40_05905;Dbxref=NCBI_GP:RUP88778.1;Name=RUP88778.1;gbkey=CDS;gene=dnoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887773.1;locus_tag=D8M40_05905;product=iron ABC transporter permease;protein_id=RUP88778.1;transl_table=11 RBME01000006.1 Genbank gene 14724 15833 . + . ID=gene-D8M40_05910;Name=dnoF;gbkey=Gene;gene=dnoF;gene_biotype=protein_coding;locus_tag=D8M40_05910 RBME01000006.1 Protein Homology CDS 14724 15833 . + 0 ID=cds-RUP88779.1;Parent=gene-D8M40_05910;Dbxref=NCBI_GP:RUP88779.1;Name=RUP88779.1;gbkey=CDS;gene=dnoF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121154.1;locus_tag=D8M40_05910;product=iron ABC transporter permease;protein_id=RUP88779.1;transl_table=11 RBME01000006.1 Genbank gene 15890 16729 . + . ID=gene-D8M40_05915;Name=dnoG;gbkey=Gene;gene=dnoG;gene_biotype=protein_coding;locus_tag=D8M40_05915 RBME01000006.1 Protein Homology CDS 15890 16729 . + 0 ID=cds-RUP88780.1;Parent=gene-D8M40_05915;Dbxref=NCBI_GP:RUP88780.1;Name=RUP88780.1;gbkey=CDS;gene=dnoG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600690.1;locus_tag=D8M40_05915;product=ABC transporter ATP-binding protein;protein_id=RUP88780.1;transl_table=11 RBME01000006.1 Genbank gene 16905 26138 . + . ID=gene-D8M40_05920;Name=D8M40_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05920 RBME01000006.1 Protein Homology CDS 16905 26138 . + 0 ID=cds-RUP88781.1;Parent=gene-D8M40_05920;Dbxref=NCBI_GP:RUP88781.1;Name=RUP88781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121152.1;locus_tag=D8M40_05920;product=DUF1729 domain-containing protein;protein_id=RUP88781.1;transl_table=11 RBME01000006.1 Genbank gene 26170 27177 . + . ID=gene-D8M40_05925;Name=D8M40_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05925 RBME01000006.1 Protein Homology CDS 26170 27177 . + 0 ID=cds-RUP88782.1;Parent=gene-D8M40_05925;Dbxref=NCBI_GP:RUP88782.1;Name=RUP88782.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01522.19;locus_tag=D8M40_05925;product=polysaccharide deacetylase family protein;protein_id=RUP88782.1;transl_table=11 RBME01000006.1 Genbank gene 27251 27694 . - . ID=gene-D8M40_05930;Name=D8M40_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05930 RBME01000006.1 GeneMarkS+ CDS 27251 27694 . - 0 ID=cds-RUP88783.1;Parent=gene-D8M40_05930;Dbxref=NCBI_GP:RUP88783.1;Name=RUP88783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05930;product=hypothetical protein;protein_id=RUP88783.1;transl_table=11 RBME01000006.1 Genbank gene 27880 29118 . + . ID=gene-D8M40_05935;Name=D8M40_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05935 RBME01000006.1 Protein Homology CDS 27880 29118 . + 0 ID=cds-RUP88784.1;Parent=gene-D8M40_05935;Dbxref=NCBI_GP:RUP88784.1;Name=RUP88784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121149.1;locus_tag=D8M40_05935;product=esterase family protein;protein_id=RUP88784.1;transl_table=11 RBME01000006.1 Genbank gene 29167 29679 . + . ID=gene-D8M40_05940;Name=D8M40_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05940 RBME01000006.1 Protein Homology CDS 29167 29679 . + 0 ID=cds-RUP88785.1;Parent=gene-D8M40_05940;Dbxref=NCBI_GP:RUP88785.1;Name=RUP88785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121148.1;locus_tag=D8M40_05940;product=hypothetical protein;protein_id=RUP88785.1;transl_table=11 RBME01000006.1 Genbank gene 29676 30854 . - . ID=gene-D8M40_05945;Name=D8M40_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05945 RBME01000006.1 Protein Homology CDS 29676 30854 . - 0 ID=cds-RUP88786.1;Parent=gene-D8M40_05945;Dbxref=NCBI_GP:RUP88786.1;Name=RUP88786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327203.1;locus_tag=D8M40_05945;product=UDP-N-acetylmuramate dehydrogenase;protein_id=RUP88786.1;transl_table=11 RBME01000006.1 Genbank gene 30878 31369 . + . ID=gene-D8M40_05950;Name=D8M40_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05950 RBME01000006.1 Protein Homology CDS 30878 31369 . + 0 ID=cds-RUP88787.1;Parent=gene-D8M40_05950;Dbxref=NCBI_GP:RUP88787.1;Name=RUP88787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910704.1;locus_tag=D8M40_05950;product=DUF2505 domain-containing protein;protein_id=RUP88787.1;transl_table=11 RBME01000006.1 Genbank gene 31399 32319 . + . ID=gene-D8M40_05955;Name=D8M40_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05955 RBME01000006.1 Protein Homology CDS 31399 32319 . + 0 ID=cds-RUP88788.1;Parent=gene-D8M40_05955;Dbxref=NCBI_GP:RUP88788.1;Name=RUP88788.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11209.6;locus_tag=D8M40_05955;product=DUF2993 domain-containing protein;protein_id=RUP88788.1;transl_table=11 RBME01000006.1 Genbank gene 32316 33263 . - . ID=gene-D8M40_05960;Name=D8M40_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05960 RBME01000006.1 GeneMarkS+ CDS 32316 33263 . - 0 ID=cds-RUP88789.1;Parent=gene-D8M40_05960;Dbxref=NCBI_GP:RUP88789.1;Name=RUP88789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05960;product=hypothetical protein;protein_id=RUP88789.1;transl_table=11 RBME01000006.1 Genbank gene 33267 33575 . - . ID=gene-D8M40_05965;Name=D8M40_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05965 RBME01000006.1 Protein Homology CDS 33267 33575 . - 0 ID=cds-RUP88858.1;Parent=gene-D8M40_05965;Dbxref=NCBI_GP:RUP88858.1;Name=RUP88858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650242.1;locus_tag=D8M40_05965;product=DUF2516 family protein;protein_id=RUP88858.1;transl_table=11 RBME01000006.1 Genbank gene 33653 34120 . - . ID=gene-D8M40_05970;Name=D8M40_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05970 RBME01000006.1 GeneMarkS+ CDS 33653 34120 . - 0 ID=cds-RUP88790.1;Parent=gene-D8M40_05970;Dbxref=NCBI_GP:RUP88790.1;Name=RUP88790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_05970;product=hypothetical protein;protein_id=RUP88790.1;transl_table=11 RBME01000006.1 Genbank gene 34195 35472 . - . ID=gene-D8M40_05975;Name=D8M40_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05975 RBME01000006.1 Protein Homology CDS 34195 35472 . - 0 ID=cds-RUP88791.1;Parent=gene-D8M40_05975;Dbxref=NCBI_GP:RUP88791.1;Name=RUP88791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121141.1;locus_tag=D8M40_05975;product=DUF445 family protein;protein_id=RUP88791.1;transl_table=11 RBME01000006.1 Genbank gene 35709 36077 . - . ID=gene-D8M40_05980;Name=D8M40_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05980 RBME01000006.1 Protein Homology CDS 35709 36077 . - 0 ID=cds-RUP88792.1;Parent=gene-D8M40_05980;Dbxref=NCBI_GP:RUP88792.1;Name=RUP88792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189861.1;locus_tag=D8M40_05980;product=hypothetical protein;protein_id=RUP88792.1;transl_table=11 RBME01000006.1 Genbank gene 36214 36963 . - . ID=gene-D8M40_05985;Name=D8M40_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05985 RBME01000006.1 Protein Homology CDS 36214 36963 . - 0 ID=cds-RUP88793.1;Parent=gene-D8M40_05985;Dbxref=NCBI_GP:RUP88793.1;Name=RUP88793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599620.1;locus_tag=D8M40_05985;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=RUP88793.1;transl_table=11 RBME01000006.1 Genbank gene 36963 38972 . - . ID=gene-D8M40_05990;Name=D8M40_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05990 RBME01000006.1 Protein Homology CDS 36963 38972 . - 0 ID=cds-RUP88794.1;Parent=gene-D8M40_05990;Dbxref=NCBI_GP:RUP88794.1;Name=RUP88794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323075.1;locus_tag=D8M40_05990;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=RUP88794.1;transl_table=11 RBME01000006.1 Genbank gene 39039 39794 . - . ID=gene-D8M40_05995;Name=D8M40_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_05995 RBME01000006.1 Protein Homology CDS 39039 39794 . - 0 ID=cds-RUP88795.1;Parent=gene-D8M40_05995;Dbxref=NCBI_GP:RUP88795.1;Name=RUP88795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531187.1;locus_tag=D8M40_05995;product=succinate dehydrogenase;protein_id=RUP88795.1;transl_table=11 RBME01000006.1 Genbank gene 40191 41606 . - . ID=gene-D8M40_06000;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=D8M40_06000 RBME01000006.1 Protein Homology CDS 40191 41606 . - 0 ID=cds-RUP88859.1;Parent=gene-D8M40_06000;Dbxref=NCBI_GP:RUP88859.1;Name=RUP88859.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846183.1;locus_tag=D8M40_06000;product=dihydrolipoyl dehydrogenase;protein_id=RUP88859.1;transl_table=11 RBME01000006.1 Genbank gene 42229 43353 . + . ID=gene-D8M40_06005;Name=D8M40_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06005 RBME01000006.1 Protein Homology CDS 42229 43353 . + 0 ID=cds-RUP88796.1;Parent=gene-D8M40_06005;Dbxref=NCBI_GP:RUP88796.1;Name=RUP88796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121134.1;locus_tag=D8M40_06005;product=esterase family protein;protein_id=RUP88796.1;transl_table=11 RBME01000006.1 Genbank gene 43584 44579 . + . ID=gene-D8M40_06010;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=D8M40_06010 RBME01000006.1 Protein Homology CDS 43584 44579 . + 0 ID=cds-RUP88797.1;Parent=gene-D8M40_06010;Dbxref=NCBI_GP:RUP88797.1;Name=RUP88797.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327169.1;locus_tag=D8M40_06010;product=dTDP-glucose 4%2C6-dehydratase;protein_id=RUP88797.1;transl_table=11 RBME01000006.1 Genbank gene 44595 45962 . + . ID=gene-D8M40_06015;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=D8M40_06015 RBME01000006.1 Protein Homology CDS 44595 45962 . + 0 ID=cds-RUP88860.1;Parent=gene-D8M40_06015;Dbxref=NCBI_GP:RUP88860.1;Name=RUP88860.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121132.1;locus_tag=D8M40_06015;product=dTDP-4-dehydrorhamnose reductase;protein_id=RUP88860.1;transl_table=11 RBME01000006.1 Genbank pseudogene 46032 47324 . + . ID=gene-D8M40_06020;Name=D8M40_06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06020;pseudo=true RBME01000006.1 Protein Homology CDS 46032 47324 . + 0 ID=cds-D8M40_06020;Parent=gene-D8M40_06020;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853604.1;locus_tag=D8M40_06020;product=sodium:glutamate symporter;pseudo=true;transl_table=11 RBME01000006.1 Genbank gene 47454 48320 . + . ID=gene-D8M40_06025;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=D8M40_06025 RBME01000006.1 Protein Homology CDS 47454 48320 . + 0 ID=cds-RUP88798.1;Parent=gene-D8M40_06025;Dbxref=NCBI_GP:RUP88798.1;Name=RUP88798.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121131.1;locus_tag=D8M40_06025;product=glucose-1-phosphate thymidylyltransferase;protein_id=RUP88798.1;transl_table=11 RBME01000006.1 Genbank gene 48372 49301 . + . ID=gene-D8M40_06030;Name=D8M40_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06030 RBME01000006.1 Protein Homology CDS 48372 49301 . + 0 ID=cds-RUP88799.1;Parent=gene-D8M40_06030;Dbxref=NCBI_GP:RUP88799.1;Name=RUP88799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394704.1;locus_tag=D8M40_06030;product=disulfide bond formation protein DsbA;protein_id=RUP88799.1;transl_table=11 RBME01000006.1 Genbank gene 49319 50182 . + . ID=gene-D8M40_06035;Name=D8M40_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06035 RBME01000006.1 Protein Homology CDS 49319 50182 . + 0 ID=cds-RUP88800.1;Parent=gene-D8M40_06035;Dbxref=NCBI_GP:RUP88800.1;Name=RUP88800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121129.1;locus_tag=D8M40_06035;product=cytochrome c biogenesis protein CcdA;protein_id=RUP88800.1;transl_table=11 RBME01000006.1 Genbank gene 50236 50853 . - . ID=gene-D8M40_06040;Name=D8M40_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06040 RBME01000006.1 Protein Homology CDS 50236 50853 . - 0 ID=cds-RUP88801.1;Parent=gene-D8M40_06040;Dbxref=NCBI_GP:RUP88801.1;Name=RUP88801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189892.1;locus_tag=D8M40_06040;product=MBL fold metallo-hydrolase;protein_id=RUP88801.1;transl_table=11 RBME01000006.1 Genbank gene 50859 51989 . - . ID=gene-D8M40_06045;Name=D8M40_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06045 RBME01000006.1 Protein Homology CDS 50859 51989 . - 0 ID=cds-RUP88861.1;Parent=gene-D8M40_06045;Dbxref=NCBI_GP:RUP88861.1;Name=RUP88861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323088.1;locus_tag=D8M40_06045;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=RUP88861.1;transl_table=11 RBME01000006.1 Genbank gene 52292 53935 . + . ID=gene-D8M40_06050;Name=D8M40_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06050 RBME01000006.1 Protein Homology CDS 52292 53935 . + 0 ID=cds-RUP88802.1;Parent=gene-D8M40_06050;Dbxref=NCBI_GP:RUP88802.1;Name=RUP88802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121126.1;locus_tag=D8M40_06050;product=acyl-CoA synthetase;protein_id=RUP88802.1;transl_table=11 RBME01000006.1 Genbank gene 54584 54982 . - . ID=gene-D8M40_06055;Name=D8M40_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06055 RBME01000006.1 Protein Homology CDS 54584 54982 . - 0 ID=cds-RUP88803.1;Parent=gene-D8M40_06055;Dbxref=NCBI_GP:RUP88803.1;Name=RUP88803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010935748.1;locus_tag=D8M40_06055;product=ATP-binding protein;protein_id=RUP88803.1;transl_table=11 RBME01000006.1 Genbank gene 55184 56911 . - . ID=gene-D8M40_06060;Name=D8M40_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06060 RBME01000006.1 Protein Homology CDS 55184 56911 . - 0 ID=cds-RUP88804.1;Parent=gene-D8M40_06060;Dbxref=NCBI_GP:RUP88804.1;Name=RUP88804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014311671.1;locus_tag=D8M40_06060;product=transcriptional regulator;protein_id=RUP88804.1;transl_table=11 RBME01000006.1 Genbank gene 57128 57709 . - . ID=gene-D8M40_06065;Name=D8M40_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06065 RBME01000006.1 Protein Homology CDS 57128 57709 . - 0 ID=cds-RUP88805.1;Parent=gene-D8M40_06065;Dbxref=NCBI_GP:RUP88805.1;Name=RUP88805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317303.1;locus_tag=D8M40_06065;product=hypothetical protein;protein_id=RUP88805.1;transl_table=11 RBME01000006.1 Genbank gene 57731 57979 . - . ID=gene-D8M40_06070;Name=D8M40_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06070 RBME01000006.1 Protein Homology CDS 57731 57979 . - 0 ID=cds-RUP88806.1;Parent=gene-D8M40_06070;Dbxref=NCBI_GP:RUP88806.1;Name=RUP88806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317304.1;locus_tag=D8M40_06070;product=hypothetical protein;protein_id=RUP88806.1;transl_table=11 RBME01000006.1 Genbank gene 57976 61170 . - . ID=gene-D8M40_06075;Name=D8M40_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06075 RBME01000006.1 Protein Homology CDS 57976 61170 . - 0 ID=cds-RUP88807.1;Parent=gene-D8M40_06075;Dbxref=NCBI_GP:RUP88807.1;Name=RUP88807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317305.1;locus_tag=D8M40_06075;product=type I restriction endonuclease subunit R;protein_id=RUP88807.1;transl_table=11 RBME01000006.1 Genbank gene 61163 62332 . - . ID=gene-D8M40_06080;Name=D8M40_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06080 RBME01000006.1 Protein Homology CDS 61163 62332 . - 0 ID=cds-RUP88808.1;Parent=gene-D8M40_06080;Dbxref=NCBI_GP:RUP88808.1;Name=RUP88808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=D8M40_06080;product=restriction endonuclease subunit S;protein_id=RUP88808.1;transl_table=11 RBME01000006.1 Genbank gene 62332 63939 . - . ID=gene-D8M40_06085;Name=D8M40_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06085 RBME01000006.1 Protein Homology CDS 62332 63939 . - 0 ID=cds-RUP88809.1;Parent=gene-D8M40_06085;Dbxref=NCBI_GP:RUP88809.1;Name=RUP88809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319562.1;locus_tag=D8M40_06085;product=SAM-dependent DNA methyltransferase;protein_id=RUP88809.1;transl_table=11 RBME01000006.1 Genbank gene 64020 65972 . - . ID=gene-D8M40_06090;Name=D8M40_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06090 RBME01000006.1 Protein Homology CDS 64020 65972 . - 0 ID=cds-RUP88810.1;Parent=gene-D8M40_06090;Dbxref=NCBI_GP:RUP88810.1;Name=RUP88810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014302592.1;locus_tag=D8M40_06090;product=DNA-binding protein;protein_id=RUP88810.1;transl_table=11 RBME01000006.1 Genbank gene 66112 66306 . + . ID=gene-D8M40_06095;Name=D8M40_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06095 RBME01000006.1 Protein Homology CDS 66112 66306 . + 0 ID=cds-RUP88811.1;Parent=gene-D8M40_06095;Dbxref=NCBI_GP:RUP88811.1;Name=RUP88811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012038906.1;locus_tag=D8M40_06095;product=hypothetical protein;protein_id=RUP88811.1;transl_table=11 RBME01000006.1 Genbank pseudogene 66256 67338 . - . ID=gene-D8M40_06100;Name=D8M40_06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06100;pseudo=true RBME01000006.1 Protein Homology CDS 66256 67338 . - 0 ID=cds-D8M40_06100;Parent=gene-D8M40_06100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014302593.1;locus_tag=D8M40_06100;product=Fic family protein;pseudo=true;transl_table=11 RBME01000006.1 Genbank gene 67538 67613 . - . ID=gene-D8M40_06105;Name=D8M40_06105;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_06105 RBME01000006.1 tRNAscan-SE tRNA 67538 67613 . - . ID=rna-D8M40_06105;Parent=gene-D8M40_06105;anticodon=(pos:complement(67578..67580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06105;product=tRNA-Thr RBME01000006.1 tRNAscan-SE exon 67538 67613 . - . ID=exon-D8M40_06105-1;Parent=rna-D8M40_06105;anticodon=(pos:complement(67578..67580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06105;product=tRNA-Thr RBME01000006.1 Genbank gene 67755 69014 . - . ID=gene-D8M40_06110;Name=D8M40_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06110 RBME01000006.1 Protein Homology CDS 67755 69014 . - 0 ID=cds-RUP88862.1;Parent=gene-D8M40_06110;Dbxref=NCBI_GP:RUP88862.1;Name=RUP88862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119173.1;locus_tag=D8M40_06110;product=DNA polymerase III subunit delta';protein_id=RUP88862.1;transl_table=11 RBME01000006.1 Genbank gene 69160 70686 . + . ID=gene-D8M40_06115;Name=D8M40_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06115 RBME01000006.1 Protein Homology CDS 69160 70686 . + 0 ID=cds-RUP88812.1;Parent=gene-D8M40_06115;Dbxref=NCBI_GP:RUP88812.1;Name=RUP88812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846159.1;locus_tag=D8M40_06115;product=adenylate/guanylate cyclase domain-containing protein;protein_id=RUP88812.1;transl_table=11 RBME01000006.1 Genbank gene 70910 72169 . + . ID=gene-D8M40_06120;Name=D8M40_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06120 RBME01000006.1 Protein Homology CDS 70910 72169 . + 0 ID=cds-RUP88863.1;Parent=gene-D8M40_06120;Dbxref=NCBI_GP:RUP88863.1;Name=RUP88863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323093.1;locus_tag=D8M40_06120;product=DUF418 domain-containing protein;protein_id=RUP88863.1;transl_table=11 RBME01000006.1 Genbank gene 72166 75165 . - . ID=gene-D8M40_06125;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=D8M40_06125 RBME01000006.1 Protein Homology CDS 72166 75165 . - 0 ID=cds-RUP88813.1;Parent=gene-D8M40_06125;Dbxref=NCBI_GP:RUP88813.1;Name=RUP88813.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121110.1;locus_tag=D8M40_06125;product=type I DNA topoisomerase;protein_id=RUP88813.1;transl_table=11 RBME01000006.1 Genbank gene 75354 75557 . - . ID=gene-D8M40_06130;Name=D8M40_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06130 RBME01000006.1 Protein Homology CDS 75354 75557 . - 0 ID=cds-RUP88814.1;Parent=gene-D8M40_06130;Dbxref=NCBI_GP:RUP88814.1;Name=RUP88814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010266781.1;locus_tag=D8M40_06130;product=cold-shock protein;protein_id=RUP88814.1;transl_table=11 RBME01000006.1 Genbank gene 75744 78200 . + . ID=gene-D8M40_06135;Name=D8M40_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06135 RBME01000006.1 Protein Homology CDS 75744 78200 . + 0 ID=cds-RUP88815.1;Parent=gene-D8M40_06135;Dbxref=NCBI_GP:RUP88815.1;Name=RUP88815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121108.1;locus_tag=D8M40_06135;product=DUF1998 domain-containing protein;protein_id=RUP88815.1;transl_table=11 RBME01000006.1 Genbank gene 78247 78633 . - . ID=gene-D8M40_06140;Name=D8M40_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06140 RBME01000006.1 Protein Homology CDS 78247 78633 . - 0 ID=cds-RUP88816.1;Parent=gene-D8M40_06140;Dbxref=NCBI_GP:RUP88816.1;Name=RUP88816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121107.1;locus_tag=D8M40_06140;product=TadE-like protein;protein_id=RUP88816.1;transl_table=11 RBME01000006.1 Genbank gene 78630 78932 . - . ID=gene-D8M40_06145;Name=D8M40_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06145 RBME01000006.1 Protein Homology CDS 78630 78932 . - 0 ID=cds-RUP88817.1;Parent=gene-D8M40_06145;Dbxref=NCBI_GP:RUP88817.1;Name=RUP88817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021504.1;locus_tag=D8M40_06145;product=hypothetical protein;protein_id=RUP88817.1;transl_table=11 RBME01000006.1 Genbank gene 78988 79128 . - . ID=gene-D8M40_06150;Name=D8M40_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06150 RBME01000006.1 Protein Homology CDS 78988 79128 . - 0 ID=cds-RUP88864.1;Parent=gene-D8M40_06150;Dbxref=NCBI_GP:RUP88864.1;Name=RUP88864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019355568.1;locus_tag=D8M40_06150;product=DUF4244 domain-containing protein;protein_id=RUP88864.1;transl_table=11 RBME01000006.1 Genbank gene 79361 79930 . - . ID=gene-D8M40_06155;Name=D8M40_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06155 RBME01000006.1 Protein Homology CDS 79361 79930 . - 0 ID=cds-RUP88865.1;Parent=gene-D8M40_06155;Dbxref=NCBI_GP:RUP88865.1;Name=RUP88865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280908.1;locus_tag=D8M40_06155;product=type II secretion system F family protein;protein_id=RUP88865.1;transl_table=11 RBME01000006.1 Genbank gene 79942 80745 . - . ID=gene-D8M40_06160;Name=D8M40_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06160 RBME01000006.1 Protein Homology CDS 79942 80745 . - 0 ID=cds-RUP88818.1;Parent=gene-D8M40_06160;Dbxref=NCBI_GP:RUP88818.1;Name=RUP88818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00482.21;locus_tag=D8M40_06160;product=type II secretion protein F;protein_id=RUP88818.1;transl_table=11 RBME01000006.1 Genbank gene 80742 81869 . - . ID=gene-D8M40_06165;Name=D8M40_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06165 RBME01000006.1 Protein Homology CDS 80742 81869 . - 0 ID=cds-RUP88819.1;Parent=gene-D8M40_06165;Dbxref=NCBI_GP:RUP88819.1;Name=RUP88819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121102.1;locus_tag=D8M40_06165;product=TadA family conjugal transfer-associated ATPase;protein_id=RUP88819.1;transl_table=11 RBME01000006.1 Genbank gene 81912 83120 . - . ID=gene-D8M40_06170;Name=D8M40_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06170 RBME01000006.1 GeneMarkS+ CDS 81912 83120 . - 0 ID=cds-RUP88820.1;Parent=gene-D8M40_06170;Dbxref=NCBI_GP:RUP88820.1;Name=RUP88820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06170;product=hypothetical protein;protein_id=RUP88820.1;transl_table=11 RBME01000006.1 Genbank gene 83441 84430 . + . ID=gene-D8M40_06175;Name=D8M40_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06175 RBME01000006.1 Protein Homology CDS 83441 84430 . + 0 ID=cds-RUP88821.1;Parent=gene-D8M40_06175;Dbxref=NCBI_GP:RUP88821.1;Name=RUP88821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121100.1;locus_tag=D8M40_06175;product=HAD family hydrolase;protein_id=RUP88821.1;transl_table=11 RBME01000006.1 Genbank gene 84519 85022 . + . ID=gene-D8M40_06180;Name=D8M40_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06180 RBME01000006.1 Protein Homology CDS 84519 85022 . + 0 ID=cds-RUP88822.1;Parent=gene-D8M40_06180;Dbxref=NCBI_GP:RUP88822.1;Name=RUP88822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189941.1;locus_tag=D8M40_06180;product=phage holin family protein;protein_id=RUP88822.1;transl_table=11 RBME01000006.1 Genbank gene 85083 86045 . + . ID=gene-D8M40_06185;Name=D8M40_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06185 RBME01000006.1 Protein Homology CDS 85083 86045 . + 0 ID=cds-RUP88823.1;Parent=gene-D8M40_06185;Dbxref=NCBI_GP:RUP88823.1;Name=RUP88823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12697.5;locus_tag=D8M40_06185;product=alpha/beta hydrolase;protein_id=RUP88823.1;transl_table=11 RBME01000006.1 Genbank gene 86103 87299 . - . ID=gene-D8M40_06190;Name=D8M40_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06190 RBME01000006.1 Protein Homology CDS 86103 87299 . - 0 ID=cds-RUP88824.1;Parent=gene-D8M40_06190;Dbxref=NCBI_GP:RUP88824.1;Name=RUP88824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121097.1;locus_tag=D8M40_06190;product=serine protease;protein_id=RUP88824.1;transl_table=11 RBME01000006.1 Genbank gene 87335 88096 . - . ID=gene-D8M40_06195;Name=D8M40_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06195 RBME01000006.1 Protein Homology CDS 87335 88096 . - 0 ID=cds-RUP88825.1;Parent=gene-D8M40_06195;Dbxref=NCBI_GP:RUP88825.1;Name=RUP88825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121096.1;locus_tag=D8M40_06195;product=CoA pyrophosphatase;protein_id=RUP88825.1;transl_table=11 RBME01000006.1 Genbank gene 88096 88851 . - . ID=gene-D8M40_06200;Name=D8M40_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06200 RBME01000006.1 Protein Homology CDS 88096 88851 . - 0 ID=cds-RUP88826.1;Parent=gene-D8M40_06200;Dbxref=NCBI_GP:RUP88826.1;Name=RUP88826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00578.19;locus_tag=D8M40_06200;product=TlpA family protein disulfide reductase;protein_id=RUP88826.1;transl_table=11 RBME01000006.1 Genbank gene 89227 89910 . + . ID=gene-D8M40_06205;Name=D8M40_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06205 RBME01000006.1 Protein Homology CDS 89227 89910 . + 0 ID=cds-RUP88827.1;Parent=gene-D8M40_06205;Dbxref=NCBI_GP:RUP88827.1;Name=RUP88827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770229.1;locus_tag=D8M40_06205;product=Crp/Fnr family transcriptional regulator;protein_id=RUP88827.1;transl_table=11 RBME01000006.1 Genbank gene 90115 90960 . - . ID=gene-D8M40_06210;Name=D8M40_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06210 RBME01000006.1 Protein Homology CDS 90115 90960 . - 0 ID=cds-RUP88828.1;Parent=gene-D8M40_06210;Dbxref=NCBI_GP:RUP88828.1;Name=RUP88828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650156.1;locus_tag=D8M40_06210;product=MBL fold metallo-hydrolase;protein_id=RUP88828.1;transl_table=11 RBME01000006.1 Genbank gene 90964 91440 . - . ID=gene-D8M40_06215;Name=D8M40_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06215 RBME01000006.1 Protein Homology CDS 90964 91440 . - 0 ID=cds-RUP88829.1;Parent=gene-D8M40_06215;Dbxref=NCBI_GP:RUP88829.1;Name=RUP88829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121091.1;locus_tag=D8M40_06215;product=RidA family protein;protein_id=RUP88829.1;transl_table=11 RBME01000006.1 Genbank gene 91443 91598 . - . ID=gene-D8M40_06220;Name=D8M40_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06220 RBME01000006.1 Protein Homology CDS 91443 91598 . - 0 ID=cds-RUP88830.1;Parent=gene-D8M40_06220;Dbxref=NCBI_GP:RUP88830.1;Name=RUP88830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005522039.1;locus_tag=D8M40_06220;product=DUF4177 domain-containing protein;protein_id=RUP88830.1;transl_table=11 RBME01000006.1 Genbank gene 91688 92041 . - . ID=gene-D8M40_06225;Name=D8M40_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06225 RBME01000006.1 Protein Homology CDS 91688 92041 . - 0 ID=cds-RUP88831.1;Parent=gene-D8M40_06225;Dbxref=NCBI_GP:RUP88831.1;Name=RUP88831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018023131.1;locus_tag=D8M40_06225;product=WhiB family transcriptional regulator;protein_id=RUP88831.1;transl_table=11 RBME01000006.1 Genbank gene 92128 94602 . + . ID=gene-D8M40_06230;Name=D8M40_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06230 RBME01000006.1 Protein Homology CDS 92128 94602 . + 0 ID=cds-RUP88832.1;Parent=gene-D8M40_06230;Dbxref=NCBI_GP:RUP88832.1;Name=RUP88832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530321.1;locus_tag=D8M40_06230;product=penicillin-binding protein;protein_id=RUP88832.1;transl_table=11 RBME01000006.1 Genbank gene 94599 95138 . - . ID=gene-D8M40_06235;Name=D8M40_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06235 RBME01000006.1 Protein Homology CDS 94599 95138 . - 0 ID=cds-RUP88833.1;Parent=gene-D8M40_06235;Dbxref=NCBI_GP:RUP88833.1;Name=RUP88833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121087.1;locus_tag=D8M40_06235;product=GatB/YqeY domain-containing protein;protein_id=RUP88833.1;transl_table=11 RBME01000006.1 Genbank gene 95222 96127 . + . ID=gene-D8M40_06240;Name=D8M40_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06240 RBME01000006.1 Protein Homology CDS 95222 96127 . + 0 ID=cds-RUP88866.1;Parent=gene-D8M40_06240;Dbxref=NCBI_GP:RUP88866.1;Name=RUP88866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855784.1;locus_tag=D8M40_06240;product=metallophosphoesterase;protein_id=RUP88866.1;transl_table=11 RBME01000006.1 Genbank gene 96251 96327 . + . ID=gene-D8M40_06245;Name=D8M40_06245;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_06245 RBME01000006.1 tRNAscan-SE tRNA 96251 96327 . + . ID=rna-D8M40_06245;Parent=gene-D8M40_06245;anticodon=(pos:96285..96287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06245;product=tRNA-Pro RBME01000006.1 tRNAscan-SE exon 96251 96327 . + . ID=exon-D8M40_06245-1;Parent=rna-D8M40_06245;anticodon=(pos:96285..96287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06245;product=tRNA-Pro RBME01000006.1 Genbank gene 96554 97951 . - . ID=gene-D8M40_06250;Name=D8M40_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06250 RBME01000006.1 GeneMarkS+ CDS 96554 97951 . - 0 ID=cds-RUP88834.1;Parent=gene-D8M40_06250;Dbxref=NCBI_GP:RUP88834.1;Name=RUP88834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06250;product=collagen-like protein;protein_id=RUP88834.1;transl_table=11 RBME01000006.1 Genbank gene 98186 98485 . + . ID=gene-D8M40_06255;Name=D8M40_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06255 RBME01000006.1 Protein Homology CDS 98186 98485 . + 0 ID=cds-RUP88835.1;Parent=gene-D8M40_06255;Dbxref=NCBI_GP:RUP88835.1;Name=RUP88835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121084.1;locus_tag=D8M40_06255;product=peptidase M23;protein_id=RUP88835.1;transl_table=11 RBME01000006.1 Genbank gene 98587 99999 . - . ID=gene-D8M40_06260;Name=D8M40_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06260 RBME01000006.1 GeneMarkS+ CDS 98587 99999 . - 0 ID=cds-RUP88836.1;Parent=gene-D8M40_06260;Dbxref=NCBI_GP:RUP88836.1;Name=RUP88836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06260;product=hypothetical protein;protein_id=RUP88836.1;transl_table=11 RBME01000006.1 Genbank gene 100370 101917 . - . ID=gene-D8M40_06265;Name=D8M40_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06265 RBME01000006.1 Protein Homology CDS 100370 101917 . - 0 ID=cds-RUP88837.1;Parent=gene-D8M40_06265;Dbxref=NCBI_GP:RUP88837.1;Name=RUP88837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309894.1;locus_tag=D8M40_06265;product=catalase;protein_id=RUP88837.1;transl_table=11 RBME01000006.1 Genbank gene 102070 102618 . + . ID=gene-D8M40_06270;Name=D8M40_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06270 RBME01000006.1 Protein Homology CDS 102070 102618 . + 0 ID=cds-RUP88838.1;Parent=gene-D8M40_06270;Dbxref=NCBI_GP:RUP88838.1;Name=RUP88838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910627.1;locus_tag=D8M40_06270;product=RNA polymerase sigma factor;protein_id=RUP88838.1;transl_table=11 RBME01000006.1 Genbank gene 102707 104014 . + . ID=gene-D8M40_06275;Name=D8M40_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06275 RBME01000006.1 Protein Homology CDS 102707 104014 . + 0 ID=cds-RUP88839.1;Parent=gene-D8M40_06275;Dbxref=NCBI_GP:RUP88839.1;Name=RUP88839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280845.1;locus_tag=D8M40_06275;product=hypothetical protein;protein_id=RUP88839.1;transl_table=11 RBME01000006.1 Genbank gene 104124 105161 . - . ID=gene-D8M40_06280;Name=D8M40_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06280 RBME01000006.1 Protein Homology CDS 104124 105161 . - 0 ID=cds-RUP88840.1;Parent=gene-D8M40_06280;Dbxref=NCBI_GP:RUP88840.1;Name=RUP88840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297959.1;locus_tag=D8M40_06280;product=aspartate-semialdehyde dehydrogenase;protein_id=RUP88840.1;transl_table=11 RBME01000006.1 Genbank gene 105198 106463 . - . ID=gene-D8M40_06285;Name=D8M40_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06285 RBME01000006.1 Protein Homology CDS 105198 106463 . - 0 ID=cds-RUP88841.1;Parent=gene-D8M40_06285;Dbxref=NCBI_GP:RUP88841.1;Name=RUP88841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121078.1;locus_tag=D8M40_06285;product=aspartate kinase;protein_id=RUP88841.1;transl_table=11 RBME01000006.1 Genbank gene 106838 108661 . + . ID=gene-D8M40_06290;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=D8M40_06290 RBME01000006.1 Protein Homology CDS 106838 108661 . + 0 ID=cds-RUP88842.1;Parent=gene-D8M40_06290;Dbxref=NCBI_GP:RUP88842.1;Name=RUP88842.1;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121076.1;locus_tag=D8M40_06290;product=2-isopropylmalate synthase;protein_id=RUP88842.1;transl_table=11 RBME01000006.1 Genbank pseudogene 108830 109861 . + . ID=gene-D8M40_06295;Name=D8M40_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06295;pseudo=true RBME01000006.1 Protein Homology CDS 108830 109861 . + 0 ID=cds-D8M40_06295;Parent=gene-D8M40_06295;Note=3'-5' exonuclease of DNA polymerase III%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021545.1;locus_tag=D8M40_06295;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11 RBME01000006.1 Genbank gene 110319 111560 . + . ID=gene-D8M40_06300;Name=D8M40_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06300 RBME01000006.1 Protein Homology CDS 110319 111560 . + 0 ID=cds-RUP88843.1;Parent=gene-D8M40_06300;Dbxref=NCBI_GP:RUP88843.1;Name=RUP88843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121073.1;locus_tag=D8M40_06300;product=Mur ligase family protein;protein_id=RUP88843.1;transl_table=11 RBME01000006.1 Genbank gene 111576 112442 . + . ID=gene-D8M40_06305;Name=D8M40_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06305 RBME01000006.1 Protein Homology CDS 111576 112442 . + 0 ID=cds-RUP88844.1;Parent=gene-D8M40_06305;Dbxref=NCBI_GP:RUP88844.1;Name=RUP88844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121072.1;locus_tag=D8M40_06305;product=glutamine amidotransferase;protein_id=RUP88844.1;transl_table=11 RBME01000006.1 Genbank gene 112525 113466 . + . ID=gene-D8M40_06310;Name=D8M40_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06310 RBME01000006.1 Protein Homology CDS 112525 113466 . + 0 ID=cds-RUP88845.1;Parent=gene-D8M40_06310;Dbxref=NCBI_GP:RUP88845.1;Name=RUP88845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08021.9;locus_tag=D8M40_06310;product=siderophore-interacting protein;protein_id=RUP88845.1;transl_table=11 RBME01000006.1 Genbank gene 113540 114199 . - . ID=gene-D8M40_06315;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=D8M40_06315 RBME01000006.1 Protein Homology CDS 113540 114199 . - 0 ID=cds-RUP88846.1;Parent=gene-D8M40_06315;Dbxref=NCBI_GP:RUP88846.1;Name=RUP88846.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121070.1;locus_tag=D8M40_06315;product=recombination protein RecR;protein_id=RUP88846.1;transl_table=11 RBME01000006.1 Genbank gene 114200 114538 . - . ID=gene-D8M40_06320;Name=D8M40_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06320 RBME01000006.1 Protein Homology CDS 114200 114538 . - 0 ID=cds-RUP88847.1;Parent=gene-D8M40_06320;Dbxref=NCBI_GP:RUP88847.1;Name=RUP88847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821574.1;locus_tag=D8M40_06320;product=YbaB/EbfC family nucleoid-associated protein;protein_id=RUP88847.1;transl_table=11 RBME01000006.1 Genbank gene 114665 117319 . - . ID=gene-D8M40_06325;Name=D8M40_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06325 RBME01000006.1 Protein Homology CDS 114665 117319 . - 0 ID=cds-RUP88848.1;Parent=gene-D8M40_06325;Dbxref=NCBI_GP:RUP88848.1;Name=RUP88848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821575.1;locus_tag=D8M40_06325;product=DNA polymerase III subunit gamma and tau;protein_id=RUP88848.1;transl_table=11 RBME01000006.1 Genbank gene 117408 117986 . - . ID=gene-D8M40_06330;Name=D8M40_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06330 RBME01000006.1 Protein Homology CDS 117408 117986 . - 0 ID=cds-RUP88849.1;Parent=gene-D8M40_06330;Dbxref=NCBI_GP:RUP88849.1;Name=RUP88849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121067.1;locus_tag=D8M40_06330;product=hypothetical protein;protein_id=RUP88849.1;transl_table=11 RBME01000006.1 Genbank gene 117967 119235 . - . ID=gene-D8M40_06335;Name=D8M40_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06335 RBME01000006.1 Protein Homology CDS 117967 119235 . - 0 ID=cds-RUP88850.1;Parent=gene-D8M40_06335;Dbxref=NCBI_GP:RUP88850.1;Name=RUP88850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121066.1;locus_tag=D8M40_06335;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=RUP88850.1;transl_table=11 RBME01000006.1 Genbank gene 119377 120159 . - . ID=gene-D8M40_06340;Name=D8M40_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06340 RBME01000006.1 Protein Homology CDS 119377 120159 . - 0 ID=cds-RUP88867.1;Parent=gene-D8M40_06340;Dbxref=NCBI_GP:RUP88867.1;Name=RUP88867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823799.1;locus_tag=D8M40_06340;product=ABC transporter ATP-binding protein;protein_id=RUP88867.1;transl_table=11 RBME01000006.1 Genbank gene 120200 121048 . - . ID=gene-D8M40_06345;Name=D8M40_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06345 RBME01000006.1 Protein Homology CDS 120200 121048 . - 0 ID=cds-RUP88851.1;Parent=gene-D8M40_06345;Dbxref=NCBI_GP:RUP88851.1;Name=RUP88851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022310.1;locus_tag=D8M40_06345;product=ABC transporter permease;protein_id=RUP88851.1;transl_table=11 RBME01000006.1 Genbank gene 121067 122248 . - . ID=gene-D8M40_06350;Name=D8M40_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06350 RBME01000006.1 Protein Homology CDS 121067 122248 . - 0 ID=cds-RUP88852.1;Parent=gene-D8M40_06350;Dbxref=NCBI_GP:RUP88852.1;Name=RUP88852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281069.1;locus_tag=D8M40_06350;product=ABC transporter substrate-binding protein;protein_id=RUP88852.1;transl_table=11 RBME01000006.1 Genbank gene 122931 123746 . - . ID=gene-D8M40_06355;Name=D8M40_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06355 RBME01000006.1 Protein Homology CDS 122931 123746 . - 0 ID=cds-RUP88853.1;Parent=gene-D8M40_06355;Dbxref=NCBI_GP:RUP88853.1;Name=RUP88853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121059.1;locus_tag=D8M40_06355;product=hypothetical protein;protein_id=RUP88853.1;transl_table=11 RBME01000006.1 Genbank gene 123861 123955 . - . ID=gene-D8M40_06360;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=D8M40_06360 RBME01000006.1 cmsearch SRP_RNA 123861 123955 . - . ID=rna-D8M40_06360;Parent=gene-D8M40_06360;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_06360;product=signal recognition particle sRNA small type RBME01000006.1 cmsearch exon 123861 123955 . - . ID=exon-D8M40_06360-1;Parent=rna-D8M40_06360;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_06360;product=signal recognition particle sRNA small type RBME01000006.1 Genbank gene 124149 125351 . + . ID=gene-D8M40_06365;Name=D8M40_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06365 RBME01000006.1 Protein Homology CDS 124149 125351 . + 0 ID=cds-RUP88868.1;Parent=gene-D8M40_06365;Dbxref=NCBI_GP:RUP88868.1;Name=RUP88868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062260.1;locus_tag=D8M40_06365;product=YibE/F family protein;protein_id=RUP88868.1;transl_table=11 RBME01000006.1 Genbank gene 125461 127017 . + . ID=gene-D8M40_06370;Name=D8M40_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06370 RBME01000006.1 Protein Homology CDS 125461 127017 . + 0 ID=cds-RUP88854.1;Parent=gene-D8M40_06370;Dbxref=NCBI_GP:RUP88854.1;Name=RUP88854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458397.1;locus_tag=D8M40_06370;product=DeoR family transcriptional regulator;protein_id=RUP88854.1;transl_table=11 RBME01000006.1 Genbank gene 127023 127940 . - . ID=gene-D8M40_06375;Name=D8M40_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06375 RBME01000006.1 Protein Homology CDS 127023 127940 . - 0 ID=cds-RUP88855.1;Parent=gene-D8M40_06375;Dbxref=NCBI_GP:RUP88855.1;Name=RUP88855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121056.1;locus_tag=D8M40_06375;product=siderophore-interacting protein;protein_id=RUP88855.1;transl_table=11 RBME01000006.1 Genbank gene 128003 129124 . - . ID=gene-D8M40_06380;Name=D8M40_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06380 RBME01000006.1 Protein Homology CDS 128003 129124 . - 0 ID=cds-RUP88856.1;Parent=gene-D8M40_06380;Dbxref=NCBI_GP:RUP88856.1;Name=RUP88856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121055.1;locus_tag=D8M40_06380;product=glycosyltransferase family 1 protein;protein_id=RUP88856.1;transl_table=11 RBME01000006.1 Genbank gene 129231 129419 . - . ID=gene-D8M40_06385;Name=D8M40_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06385 RBME01000006.1 GeneMarkS+ CDS 129231 129419 . - 0 ID=cds-RUP88857.1;Parent=gene-D8M40_06385;Dbxref=NCBI_GP:RUP88857.1;Name=RUP88857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06385;product=hypothetical protein;protein_id=RUP88857.1;transl_table=11 RBME01000006.1 Genbank pseudogene 129476 129553 . - . ID=gene-D8M40_06390;Name=D8M40_06390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06390;pseudo=true RBME01000006.1 Protein Homology CDS 129476 129553 . - 0 ID=cds-D8M40_06390;Parent=gene-D8M40_06390;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291578.1;locus_tag=D8M40_06390;product=Resuscitation-promoting factor Rpf1;pseudo=true;transl_table=11 RBME01000006.1 Genbank gene 129530 129602 . + . ID=gene-D8M40_06395;Name=D8M40_06395;end_range=129602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06395;partial=true RBME01000006.1 Protein Homology CDS 129530 129602 . + 0 ID=cds-RUP88869.1;Parent=gene-D8M40_06395;Dbxref=NCBI_GP:RUP88869.1;Name=RUP88869.1;end_range=129602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1;locus_tag=D8M40_06395;partial=true;product=IS6 family transposase;protein_id=RUP88869.1;transl_table=11 ##sequence-region RBME01000070.1 1 1102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000070.1 Genbank region 1 1102 . + . ID=RBME01000070.1:1..1102;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000070.1 Genbank gene 1 168 . + . ID=gene-D8M40_11670;Name=D8M40_11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11670;partial=true;start_range=.,1 RBME01000070.1 Protein Homology CDS 1 168 . + 0 ID=cds-RUP85787.1;Parent=gene-D8M40_11670;Dbxref=NCBI_GP:RUP85787.1;Name=RUP85787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005786897.1;locus_tag=D8M40_11670;partial=true;product=LysR family transcriptional regulator;protein_id=RUP85787.1;start_range=.,1;transl_table=11 RBME01000070.1 Genbank gene 173 1102 . - . ID=gene-D8M40_11675;Name=D8M40_11675;end_range=1102,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11675;partial=true RBME01000070.1 Protein Homology CDS 173 1102 . - 0 ID=cds-RUP85788.1;Parent=gene-D8M40_11675;Dbxref=NCBI_GP:RUP85788.1;Name=RUP85788.1;end_range=1102,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020302054.1;locus_tag=D8M40_11675;partial=true;product=MFS transporter;protein_id=RUP85788.1;transl_table=11 ##sequence-region RBME01000071.1 1 1101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000071.1 Genbank region 1 1101 . + . ID=RBME01000071.1:1..1101;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000071.1 Genbank gene 1 379 . - . ID=gene-D8M40_11680;Name=D8M40_11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11680;partial=true;start_range=.,1 RBME01000071.1 Protein Homology CDS 1 379 . - 0 ID=cds-RUP85782.1;Parent=gene-D8M40_11680;Dbxref=NCBI_GP:RUP85782.1;Name=RUP85782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020302437.1;locus_tag=D8M40_11680;partial=true;product=cobalamin-binding protein;protein_id=RUP85782.1;start_range=.,1;transl_table=11 RBME01000071.1 Genbank gene 376 795 . - . ID=gene-D8M40_11685;Name=D8M40_11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11685 RBME01000071.1 Protein Homology CDS 376 795 . - 0 ID=cds-RUP85783.1;Parent=gene-D8M40_11685;Dbxref=NCBI_GP:RUP85783.1;Name=RUP85783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007906826.1;locus_tag=D8M40_11685;product=MFS transporter;protein_id=RUP85783.1;transl_table=11 RBME01000071.1 Genbank gene 792 1101 . - . ID=gene-D8M40_11690;Name=D8M40_11690;end_range=1101,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11690;partial=true RBME01000071.1 Protein Homology CDS 792 1101 . - 1 ID=cds-RUP85784.1;Parent=gene-D8M40_11690;Dbxref=NCBI_GP:RUP85784.1;Name=RUP85784.1;end_range=1101,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_237524.1;locus_tag=D8M40_11690;partial=true;product=GTP cyclohydrolase II;protein_id=RUP85784.1;transl_table=11 ##sequence-region RBME01000072.1 1 1087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000072.1 Genbank region 1 1087 . + . ID=RBME01000072.1:1..1087;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000072.1 Genbank gene 128 1087 . + . ID=gene-D8M40_11695;Name=D8M40_11695;end_range=1087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11695;partial=true RBME01000072.1 Protein Homology CDS 128 1087 . + 0 ID=cds-RUP85780.1;Parent=gene-D8M40_11695;Dbxref=NCBI_GP:RUP85780.1;Name=RUP85780.1;end_range=1087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008004145.1;locus_tag=D8M40_11695;partial=true;product=beta-lactamase;protein_id=RUP85780.1;transl_table=11 ##sequence-region RBME01000073.1 1 1082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000073.1 Genbank region 1 1082 . + . ID=RBME01000073.1:1..1082;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000073.1 Genbank gene 79 939 . + . ID=gene-D8M40_11700;Name=D8M40_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11700 RBME01000073.1 Protein Homology CDS 79 939 . + 0 ID=cds-RUP85777.1;Parent=gene-D8M40_11700;Dbxref=NCBI_GP:RUP85777.1;Name=RUP85777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233524.1;locus_tag=D8M40_11700;product=MurR/RpiR family transcriptional regulator;protein_id=RUP85777.1;transl_table=11 ##sequence-region RBME01000074.1 1 1045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000074.1 Genbank region 1 1045 . + . ID=RBME01000074.1:1..1045;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000074.1 Genbank gene 1 1045 . + . ID=gene-D8M40_11705;Name=D8M40_11705;end_range=1045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11705;partial=true;start_range=.,1 RBME01000074.1 Protein Homology CDS 1 1045 . + 0 ID=cds-RUP85667.1;Parent=gene-D8M40_11705;Dbxref=NCBI_GP:RUP85667.1;Name=RUP85667.1;end_range=1045,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019371578.1;locus_tag=D8M40_11705;partial=true;product=alpha/beta fold hydrolase;protein_id=RUP85667.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000075.1 1 1035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000075.1 Genbank region 1 1035 . + . ID=RBME01000075.1:1..1035;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000075.1 Genbank gene 1 1026 . - . ID=gene-D8M40_11710;Name=D8M40_11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11710;partial=true;start_range=.,1 RBME01000075.1 Protein Homology CDS 1 1026 . - 0 ID=cds-RUP85665.1;Parent=gene-D8M40_11710;Dbxref=NCBI_GP:RUP85665.1;Name=RUP85665.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00072.22%2CHMM:PF00512.23;locus_tag=D8M40_11710;partial=true;product=response regulator;protein_id=RUP85665.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000076.1 1 1034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000076.1 Genbank region 1 1034 . + . ID=RBME01000076.1:1..1034;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000076.1 Genbank gene 54 812 . + . ID=gene-D8M40_11715;Name=D8M40_11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11715 RBME01000076.1 Protein Homology CDS 54 812 . + 0 ID=cds-RUP85662.1;Parent=gene-D8M40_11715;Dbxref=NCBI_GP:RUP85662.1;Name=RUP85662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017528441.1;locus_tag=D8M40_11715;product=PIG-L family deacetylase;protein_id=RUP85662.1;transl_table=11 RBME01000076.1 Genbank gene 809 1034 . + . ID=gene-D8M40_11720;Name=D8M40_11720;end_range=1034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11720;partial=true RBME01000076.1 Protein Homology CDS 809 1034 . + 0 ID=cds-RUP85663.1;Parent=gene-D8M40_11720;Dbxref=NCBI_GP:RUP85663.1;Name=RUP85663.1;end_range=1034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019817141.1;locus_tag=D8M40_11720;partial=true;product=SAM-dependent methyltransferase;protein_id=RUP85663.1;transl_table=11 ##sequence-region RBME01000077.1 1 1027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000077.1 Genbank region 1 1027 . + . ID=RBME01000077.1:1..1027;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000077.1 Genbank gene 1 1027 . + . ID=gene-D8M40_11725;Name=D8M40_11725;end_range=1027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11725;partial=true;start_range=.,1 RBME01000077.1 Protein Homology CDS 1 1027 . + 2 ID=cds-RUP85659.1;Parent=gene-D8M40_11725;Dbxref=NCBI_GP:RUP85659.1;Name=RUP85659.1;end_range=1027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015372476.1;locus_tag=D8M40_11725;partial=true;product=ornithine monooxygenase;protein_id=RUP85659.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000078.1 1 1027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000078.1 Genbank region 1 1027 . + . ID=RBME01000078.1:1..1027;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000078.1 Genbank gene 1 149 . + . ID=gene-D8M40_11730;Name=D8M40_11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11730;partial=true;start_range=.,1 RBME01000078.1 Protein Homology CDS 1 149 . + 2 ID=cds-RUP85656.1;Parent=gene-D8M40_11730;Dbxref=NCBI_GP:RUP85656.1;Name=RUP85656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020302120.1;locus_tag=D8M40_11730;partial=true;product=ATP-binding protein;protein_id=RUP85656.1;start_range=.,1;transl_table=11 RBME01000078.1 Genbank gene 331 1027 . - . ID=gene-D8M40_11735;Name=D8M40_11735;end_range=1027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11735;partial=true RBME01000078.1 Protein Homology CDS 331 1027 . - 1 ID=cds-RUP85657.1;Parent=gene-D8M40_11735;Dbxref=NCBI_GP:RUP85657.1;Name=RUP85657.1;end_range=1027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010168506.1;locus_tag=D8M40_11735;partial=true;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RUP85657.1;transl_table=11 ##sequence-region RBME01000079.1 1 1027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000079.1 Genbank region 1 1027 . + . ID=RBME01000079.1:1..1027;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000079.1 Genbank gene 1 1027 . + . ID=gene-D8M40_11740;Name=D8M40_11740;end_range=1027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11740;partial=true;start_range=.,1 RBME01000079.1 Protein Homology CDS 1 1027 . + 1 ID=cds-RUP85570.1;Parent=gene-D8M40_11740;Dbxref=NCBI_GP:RUP85570.1;Name=RUP85570.1;end_range=1027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014720317.1;locus_tag=D8M40_11740;partial=true;product=hybrid sensor histidine kinase/response regulator;protein_id=RUP85570.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000007.1 1 123594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000007.1 Genbank region 1 123594 . + . ID=RBME01000007.1:1..123594;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000007.1 Genbank gene 1 97 . + . ID=gene-D8M40_06400;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M40_06400;partial=true;start_range=.,1 RBME01000007.1 cmsearch rRNA 1 97 . + . ID=rna-D8M40_06400;Parent=gene-D8M40_06400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_06400;partial=true;product=5S ribosomal RNA;start_range=.,1 RBME01000007.1 cmsearch exon 1 97 . + . ID=exon-D8M40_06400-1;Parent=rna-D8M40_06400;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M40_06400;partial=true;product=5S ribosomal RNA;start_range=.,1 RBME01000007.1 Genbank gene 318 1139 . + . ID=gene-D8M40_06405;Name=D8M40_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06405 RBME01000007.1 Protein Homology CDS 318 1139 . + 0 ID=cds-RUP88654.1;Parent=gene-D8M40_06405;Dbxref=NCBI_GP:RUP88654.1;Name=RUP88654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121162.1;locus_tag=D8M40_06405;product=sulfite exporter TauE/SafE family protein;protein_id=RUP88654.1;transl_table=11 RBME01000007.1 Genbank gene 1265 2845 . - . ID=gene-D8M40_06410;Name=D8M40_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06410 RBME01000007.1 Protein Homology CDS 1265 2845 . - 0 ID=cds-RUP88749.1;Parent=gene-D8M40_06410;Dbxref=NCBI_GP:RUP88749.1;Name=RUP88749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013669613.1;locus_tag=D8M40_06410;product=metallophosphoesterase family protein;protein_id=RUP88749.1;transl_table=11 RBME01000007.1 Genbank gene 3282 3932 . - . ID=gene-D8M40_06415;Name=D8M40_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06415 RBME01000007.1 Protein Homology CDS 3282 3932 . - 0 ID=cds-RUP88750.1;Parent=gene-D8M40_06415;Dbxref=NCBI_GP:RUP88750.1;Name=RUP88750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822935.1;locus_tag=D8M40_06415;product=DUF3239 domain-containing protein;protein_id=RUP88750.1;transl_table=11 RBME01000007.1 Genbank gene 4031 5701 . - . ID=gene-D8M40_06420;Name=D8M40_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06420 RBME01000007.1 Protein Homology CDS 4031 5701 . - 0 ID=cds-RUP88751.1;Parent=gene-D8M40_06420;Dbxref=NCBI_GP:RUP88751.1;Name=RUP88751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014316532.1;locus_tag=D8M40_06420;product=helicase;protein_id=RUP88751.1;transl_table=11 RBME01000007.1 Genbank gene 6126 8927 . - . ID=gene-D8M40_06425;Name=D8M40_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06425 RBME01000007.1 Protein Homology CDS 6126 8927 . - 0 ID=cds-RUP88655.1;Parent=gene-D8M40_06425;Dbxref=NCBI_GP:RUP88655.1;Name=RUP88655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13625.4;locus_tag=D8M40_06425;product=hypothetical protein;protein_id=RUP88655.1;transl_table=11 RBME01000007.1 Genbank gene 8975 9157 . + . ID=gene-D8M40_06430;Name=D8M40_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06430 RBME01000007.1 Protein Homology CDS 8975 9157 . + 0 ID=cds-RUP88656.1;Parent=gene-D8M40_06430;Dbxref=NCBI_GP:RUP88656.1;Name=RUP88656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018078.1;locus_tag=D8M40_06430;product=hypothetical protein;protein_id=RUP88656.1;transl_table=11 RBME01000007.1 Genbank gene 9473 10153 . - . ID=gene-D8M40_06435;Name=D8M40_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06435 RBME01000007.1 Protein Homology CDS 9473 10153 . - 0 ID=cds-RUP88657.1;Parent=gene-D8M40_06435;Dbxref=NCBI_GP:RUP88657.1;Name=RUP88657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121167.1;locus_tag=D8M40_06435;product=DUF3235 domain-containing protein;protein_id=RUP88657.1;transl_table=11 RBME01000007.1 Genbank gene 10689 11072 . + . ID=gene-D8M40_06440;Name=D8M40_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06440 RBME01000007.1 Protein Homology CDS 10689 11072 . + 0 ID=cds-RUP88658.1;Parent=gene-D8M40_06440;Dbxref=NCBI_GP:RUP88658.1;Name=RUP88658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187767.1;locus_tag=D8M40_06440;product=cold-shock protein;protein_id=RUP88658.1;transl_table=11 RBME01000007.1 Genbank gene 11094 11660 . - . ID=gene-D8M40_06445;Name=D8M40_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06445 RBME01000007.1 Protein Homology CDS 11094 11660 . - 0 ID=cds-RUP88752.1;Parent=gene-D8M40_06445;Dbxref=NCBI_GP:RUP88752.1;Name=RUP88752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400243.1;locus_tag=D8M40_06445;product=DUF2771 domain-containing protein;protein_id=RUP88752.1;transl_table=11 RBME01000007.1 Genbank gene 11767 12591 . - . ID=gene-D8M40_06450;Name=D8M40_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06450 RBME01000007.1 Protein Homology CDS 11767 12591 . - 0 ID=cds-RUP88659.1;Parent=gene-D8M40_06450;Dbxref=NCBI_GP:RUP88659.1;Name=RUP88659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121170.1;locus_tag=D8M40_06450;product=glutaminyl-peptide cyclotransferase;protein_id=RUP88659.1;transl_table=11 RBME01000007.1 Genbank gene 12884 14311 . + . ID=gene-D8M40_06455;Name=D8M40_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06455 RBME01000007.1 Protein Homology CDS 12884 14311 . + 0 ID=cds-RUP88753.1;Parent=gene-D8M40_06455;Dbxref=NCBI_GP:RUP88753.1;Name=RUP88753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061420.1;locus_tag=D8M40_06455;product=NCS2 family permease;protein_id=RUP88753.1;transl_table=11 RBME01000007.1 Genbank gene 14327 15328 . + . ID=gene-D8M40_06460;Name=D8M40_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06460 RBME01000007.1 Protein Homology CDS 14327 15328 . + 0 ID=cds-RUP88660.1;Parent=gene-D8M40_06460;Dbxref=NCBI_GP:RUP88660.1;Name=RUP88660.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00588.17;locus_tag=D8M40_06460;product=RNA methyltransferase;protein_id=RUP88660.1;transl_table=11 RBME01000007.1 Genbank gene 15325 16242 . - . ID=gene-D8M40_06465;Name=D8M40_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06465 RBME01000007.1 Protein Homology CDS 15325 16242 . - 0 ID=cds-RUP88661.1;Parent=gene-D8M40_06465;Dbxref=NCBI_GP:RUP88661.1;Name=RUP88661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121173.1;locus_tag=D8M40_06465;product=hypothetical protein;protein_id=RUP88661.1;transl_table=11 RBME01000007.1 Genbank gene 16270 17715 . - . ID=gene-D8M40_06470;Name=D8M40_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06470 RBME01000007.1 Protein Homology CDS 16270 17715 . - 0 ID=cds-RUP88662.1;Parent=gene-D8M40_06470;Dbxref=NCBI_GP:RUP88662.1;Name=RUP88662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303115.1;locus_tag=D8M40_06470;product=DUF3071 domain-containing protein;protein_id=RUP88662.1;transl_table=11 RBME01000007.1 Genbank gene 17752 18885 . - . ID=gene-D8M40_06475;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=D8M40_06475 RBME01000007.1 Protein Homology CDS 17752 18885 . - 0 ID=cds-RUP88663.1;Parent=gene-D8M40_06475;Dbxref=NCBI_GP:RUP88663.1;Name=RUP88663.1;gbkey=CDS;gene=serC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121175.1;locus_tag=D8M40_06475;product=phosphoserine transaminase;protein_id=RUP88663.1;transl_table=11 RBME01000007.1 Genbank gene 19208 20503 . + . ID=gene-D8M40_06480;Name=D8M40_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06480 RBME01000007.1 Protein Homology CDS 19208 20503 . + 0 ID=cds-RUP88754.1;Parent=gene-D8M40_06480;Dbxref=NCBI_GP:RUP88754.1;Name=RUP88754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328359.1;locus_tag=D8M40_06480;product=citrate synthase;protein_id=RUP88754.1;transl_table=11 RBME01000007.1 Genbank gene 20714 21082 . + . ID=gene-D8M40_06485;Name=D8M40_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06485 RBME01000007.1 Protein Homology CDS 20714 21082 . + 0 ID=cds-RUP88664.1;Parent=gene-D8M40_06485;Dbxref=NCBI_GP:RUP88664.1;Name=RUP88664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121177.1;locus_tag=D8M40_06485;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=RUP88664.1;transl_table=11 RBME01000007.1 Genbank gene 21160 22041 . + . ID=gene-D8M40_06490;Name=D8M40_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06490 RBME01000007.1 Protein Homology CDS 21160 22041 . + 0 ID=cds-RUP88665.1;Parent=gene-D8M40_06490;Dbxref=NCBI_GP:RUP88665.1;Name=RUP88665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121178.1;locus_tag=D8M40_06490;product=aldo/keto reductase;protein_id=RUP88665.1;transl_table=11 RBME01000007.1 Genbank gene 22447 22788 . + . ID=gene-D8M40_06495;Name=D8M40_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06495 RBME01000007.1 Protein Homology CDS 22447 22788 . + 0 ID=cds-RUP88666.1;Parent=gene-D8M40_06495;Dbxref=NCBI_GP:RUP88666.1;Name=RUP88666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011075195.1;locus_tag=D8M40_06495;product=DUF485 domain-containing protein;protein_id=RUP88666.1;transl_table=11 RBME01000007.1 Genbank gene 22792 24480 . + . ID=gene-D8M40_06500;Name=D8M40_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06500 RBME01000007.1 Protein Homology CDS 22792 24480 . + 0 ID=cds-RUP88667.1;Parent=gene-D8M40_06500;Dbxref=NCBI_GP:RUP88667.1;Name=RUP88667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291434.1;locus_tag=D8M40_06500;product=cation acetate symporter;protein_id=RUP88667.1;transl_table=11 RBME01000007.1 Genbank gene 24732 25568 . + . ID=gene-D8M40_06505;Name=D8M40_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06505 RBME01000007.1 Protein Homology CDS 24732 25568 . + 0 ID=cds-RUP88755.1;Parent=gene-D8M40_06505;Dbxref=NCBI_GP:RUP88755.1;Name=RUP88755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121181.1;locus_tag=D8M40_06505;product=hypothetical protein;protein_id=RUP88755.1;transl_table=11 RBME01000007.1 Genbank gene 25683 27194 . + . ID=gene-D8M40_06510;Name=D8M40_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06510 RBME01000007.1 Protein Homology CDS 25683 27194 . + 0 ID=cds-RUP88668.1;Parent=gene-D8M40_06510;Dbxref=NCBI_GP:RUP88668.1;Name=RUP88668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189379.1;locus_tag=D8M40_06510;product=MmgE/PrpD family protein;protein_id=RUP88668.1;transl_table=11 RBME01000007.1 Genbank gene 27194 28111 . + . ID=gene-D8M40_06515;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=D8M40_06515 RBME01000007.1 Protein Homology CDS 27194 28111 . + 0 ID=cds-RUP88669.1;Parent=gene-D8M40_06515;Dbxref=NCBI_GP:RUP88669.1;Name=RUP88669.1;gbkey=CDS;gene=prpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849669.1;locus_tag=D8M40_06515;product=methylisocitrate lyase;protein_id=RUP88669.1;transl_table=11 RBME01000007.1 Genbank gene 28180 29331 . + . ID=gene-D8M40_06520;Name=D8M40_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06520 RBME01000007.1 Protein Homology CDS 28180 29331 . + 0 ID=cds-RUP88670.1;Parent=gene-D8M40_06520;Dbxref=NCBI_GP:RUP88670.1;Name=RUP88670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189377.1;locus_tag=D8M40_06520;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=RUP88670.1;transl_table=11 RBME01000007.1 Genbank gene 29376 30389 . - . ID=gene-D8M40_06525;Name=D8M40_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06525 RBME01000007.1 Protein Homology CDS 29376 30389 . - 0 ID=cds-RUP88671.1;Parent=gene-D8M40_06525;Dbxref=NCBI_GP:RUP88671.1;Name=RUP88671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121185.1;locus_tag=D8M40_06525;product=DUF1906 domain-containing protein;protein_id=RUP88671.1;transl_table=11 RBME01000007.1 Genbank gene 30545 30617 . - . ID=gene-D8M40_06530;Name=D8M40_06530;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_06530 RBME01000007.1 tRNAscan-SE tRNA 30545 30617 . - . ID=rna-D8M40_06530;Parent=gene-D8M40_06530;anticodon=(pos:complement(30582..30584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06530;product=tRNA-Arg RBME01000007.1 tRNAscan-SE exon 30545 30617 . - . ID=exon-D8M40_06530-1;Parent=rna-D8M40_06530;anticodon=(pos:complement(30582..30584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_06530;product=tRNA-Arg RBME01000007.1 Genbank gene 30734 31021 . - . ID=gene-D8M40_06535;Name=D8M40_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06535 RBME01000007.1 Protein Homology CDS 30734 31021 . - 0 ID=cds-RUP88672.1;Parent=gene-D8M40_06535;Dbxref=NCBI_GP:RUP88672.1;Name=RUP88672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187687.1;locus_tag=D8M40_06535;product=NrdH-redoxin;protein_id=RUP88672.1;transl_table=11 RBME01000007.1 Genbank gene 31022 31561 . - . ID=gene-D8M40_06540;Name=D8M40_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06540 RBME01000007.1 Protein Homology CDS 31022 31561 . - 0 ID=cds-RUP88673.1;Parent=gene-D8M40_06540;Dbxref=NCBI_GP:RUP88673.1;Name=RUP88673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187686.1;locus_tag=D8M40_06540;product=dihydrofolate reductase;protein_id=RUP88673.1;transl_table=11 RBME01000007.1 Genbank gene 31567 32409 . - . ID=gene-D8M40_06545;Name=D8M40_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06545 RBME01000007.1 Protein Homology CDS 31567 32409 . - 0 ID=cds-RUP88674.1;Parent=gene-D8M40_06545;Dbxref=NCBI_GP:RUP88674.1;Name=RUP88674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187679.1;locus_tag=D8M40_06545;product=thymidylate synthase;protein_id=RUP88674.1;transl_table=11 RBME01000007.1 Genbank gene 32486 33244 . - . ID=gene-D8M40_06550;Name=D8M40_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06550 RBME01000007.1 Protein Homology CDS 32486 33244 . - 0 ID=cds-RUP88675.1;Parent=gene-D8M40_06550;Dbxref=NCBI_GP:RUP88675.1;Name=RUP88675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291399.1;locus_tag=D8M40_06550;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=RUP88675.1;transl_table=11 RBME01000007.1 Genbank gene 33275 38128 . + . ID=gene-D8M40_06555;Name=D8M40_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06555 RBME01000007.1 Protein Homology CDS 33275 38128 . + 0 ID=cds-RUP88676.1;Parent=gene-D8M40_06555;Dbxref=NCBI_GP:RUP88676.1;Name=RUP88676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530243.1;locus_tag=D8M40_06555;product=DEAD/DEAH box helicase;protein_id=RUP88676.1;transl_table=11 RBME01000007.1 Genbank gene 38201 39052 . + . ID=gene-D8M40_06560;Name=D8M40_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06560 RBME01000007.1 Protein Homology CDS 38201 39052 . + 0 ID=cds-RUP88677.1;Parent=gene-D8M40_06560;Dbxref=NCBI_GP:RUP88677.1;Name=RUP88677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530228.1;locus_tag=D8M40_06560;product=Fpg/Nei family DNA glycosylase;protein_id=RUP88677.1;transl_table=11 RBME01000007.1 Genbank gene 39075 40739 . - . ID=gene-D8M40_06565;Name=D8M40_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06565 RBME01000007.1 Protein Homology CDS 39075 40739 . - 0 ID=cds-RUP88678.1;Parent=gene-D8M40_06565;Dbxref=NCBI_GP:RUP88678.1;Name=RUP88678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121191.1;locus_tag=D8M40_06565;product=glucose-6-phosphate isomerase;protein_id=RUP88678.1;transl_table=11 RBME01000007.1 Genbank gene 40769 41884 . - . ID=gene-D8M40_06570;Name=D8M40_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06570 RBME01000007.1 Protein Homology CDS 40769 41884 . - 0 ID=cds-RUP88679.1;Parent=gene-D8M40_06570;Dbxref=NCBI_GP:RUP88679.1;Name=RUP88679.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01297;locus_tag=D8M40_06570;product=cation transporter;protein_id=RUP88679.1;transl_table=11 RBME01000007.1 Genbank gene 41898 43874 . - . ID=gene-D8M40_06575;Name=D8M40_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06575 RBME01000007.1 Protein Homology CDS 41898 43874 . - 0 ID=cds-RUP88680.1;Parent=gene-D8M40_06575;Dbxref=NCBI_GP:RUP88680.1;Name=RUP88680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121193.1;locus_tag=D8M40_06575;product=hypothetical protein;protein_id=RUP88680.1;transl_table=11 RBME01000007.1 Genbank gene 44304 44831 . - . ID=gene-D8M40_06580;Name=D8M40_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06580 RBME01000007.1 Protein Homology CDS 44304 44831 . - 0 ID=cds-RUP88681.1;Parent=gene-D8M40_06580;Dbxref=NCBI_GP:RUP88681.1;Name=RUP88681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769336.1;locus_tag=D8M40_06580;product=flavin reductase;protein_id=RUP88681.1;transl_table=11 RBME01000007.1 Genbank gene 44835 45890 . - . ID=gene-D8M40_06585;Name=D8M40_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06585 RBME01000007.1 Protein Homology CDS 44835 45890 . - 0 ID=cds-RUP88682.1;Parent=gene-D8M40_06585;Dbxref=NCBI_GP:RUP88682.1;Name=RUP88682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121195.1;locus_tag=D8M40_06585;product=acyl-CoA dehydrogenase;protein_id=RUP88682.1;transl_table=11 RBME01000007.1 Genbank gene 45992 46537 . - . ID=gene-D8M40_06590;Name=D8M40_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06590 RBME01000007.1 Protein Homology CDS 45992 46537 . - 0 ID=cds-RUP88683.1;Parent=gene-D8M40_06590;Dbxref=NCBI_GP:RUP88683.1;Name=RUP88683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018402.1;locus_tag=D8M40_06590;product=OsmC family peroxiredoxin;protein_id=RUP88683.1;transl_table=11 RBME01000007.1 Genbank gene 46824 47138 . - . ID=gene-D8M40_06595;Name=D8M40_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06595 RBME01000007.1 Protein Homology CDS 46824 47138 . - 0 ID=cds-RUP88684.1;Parent=gene-D8M40_06595;Dbxref=NCBI_GP:RUP88684.1;Name=RUP88684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581083.1;locus_tag=D8M40_06595;product=chorismate mutase;protein_id=RUP88684.1;transl_table=11 RBME01000007.1 Genbank gene 47235 49886 . + . ID=gene-D8M40_06600;Name=D8M40_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06600 RBME01000007.1 Protein Homology CDS 47235 49886 . + 0 ID=cds-RUP88685.1;Parent=gene-D8M40_06600;Dbxref=NCBI_GP:RUP88685.1;Name=RUP88685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323803.1;locus_tag=D8M40_06600;product=ATP-dependent DNA helicase PcrA;protein_id=RUP88685.1;transl_table=11 RBME01000007.1 Genbank gene 49953 50732 . - . ID=gene-D8M40_06605;Name=D8M40_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06605 RBME01000007.1 Protein Homology CDS 49953 50732 . - 0 ID=cds-RUP88686.1;Parent=gene-D8M40_06605;Dbxref=NCBI_GP:RUP88686.1;Name=RUP88686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530200.1;locus_tag=D8M40_06605;product=M23 family metallopeptidase;protein_id=RUP88686.1;transl_table=11 RBME01000007.1 Genbank gene 51205 51963 . - . ID=gene-D8M40_06610;Name=D8M40_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06610 RBME01000007.1 Protein Homology CDS 51205 51963 . - 0 ID=cds-RUP88756.1;Parent=gene-D8M40_06610;Dbxref=NCBI_GP:RUP88756.1;Name=RUP88756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187647.1;locus_tag=D8M40_06610;product=M23 family metallopeptidase;protein_id=RUP88756.1;transl_table=11 RBME01000007.1 Genbank gene 52531 54009 . + . ID=gene-D8M40_06615;Name=D8M40_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06615 RBME01000007.1 GeneMarkS+ CDS 52531 54009 . + 0 ID=cds-RUP88687.1;Parent=gene-D8M40_06615;Dbxref=NCBI_GP:RUP88687.1;Name=RUP88687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06615;product=hypothetical protein;protein_id=RUP88687.1;transl_table=11 RBME01000007.1 Genbank gene 54021 54605 . + . ID=gene-D8M40_06620;Name=D8M40_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06620 RBME01000007.1 Protein Homology CDS 54021 54605 . + 0 ID=cds-RUP88688.1;Parent=gene-D8M40_06620;Dbxref=NCBI_GP:RUP88688.1;Name=RUP88688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121202.1;locus_tag=D8M40_06620;product=phosphoribosylglycinamide formyltransferase;protein_id=RUP88688.1;transl_table=11 RBME01000007.1 Genbank gene 54598 56187 . + . ID=gene-D8M40_06625;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=D8M40_06625 RBME01000007.1 Protein Homology CDS 54598 56187 . + 0 ID=cds-RUP88689.1;Parent=gene-D8M40_06625;Dbxref=NCBI_GP:RUP88689.1;Name=RUP88689.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018024247.1;locus_tag=D8M40_06625;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=RUP88689.1;transl_table=11 RBME01000007.1 Genbank gene 56187 56786 . + . ID=gene-D8M40_06630;Name=D8M40_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06630 RBME01000007.1 Protein Homology CDS 56187 56786 . + 0 ID=cds-RUP88690.1;Parent=gene-D8M40_06630;Dbxref=NCBI_GP:RUP88690.1;Name=RUP88690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016422168.1;locus_tag=D8M40_06630;product=TetR/AcrR family transcriptional regulator;protein_id=RUP88690.1;transl_table=11 RBME01000007.1 Genbank gene 56865 57725 . + . ID=gene-D8M40_06635;Name=D8M40_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06635 RBME01000007.1 Protein Homology CDS 56865 57725 . + 0 ID=cds-RUP88691.1;Parent=gene-D8M40_06635;Dbxref=NCBI_GP:RUP88691.1;Name=RUP88691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018185662.1;locus_tag=D8M40_06635;product=CoA ester lyase;protein_id=RUP88691.1;transl_table=11 RBME01000007.1 Genbank gene 57763 58704 . - . ID=gene-D8M40_06640;Name=D8M40_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06640 RBME01000007.1 Protein Homology CDS 57763 58704 . - 0 ID=cds-RUP88692.1;Parent=gene-D8M40_06640;Dbxref=NCBI_GP:RUP88692.1;Name=RUP88692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121206.1;locus_tag=D8M40_06640;product=alpha/beta hydrolase;protein_id=RUP88692.1;transl_table=11 RBME01000007.1 Genbank gene 58775 59707 . - . ID=gene-D8M40_06645;Name=D8M40_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06645 RBME01000007.1 Protein Homology CDS 58775 59707 . - 0 ID=cds-RUP88693.1;Parent=gene-D8M40_06645;Dbxref=NCBI_GP:RUP88693.1;Name=RUP88693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121207.1;locus_tag=D8M40_06645;product=cytochrome b/b6 domain-containing protein;protein_id=RUP88693.1;transl_table=11 RBME01000007.1 Genbank gene 60341 61312 . - . ID=gene-D8M40_06650;Name=D8M40_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06650 RBME01000007.1 Protein Homology CDS 60341 61312 . - 0 ID=cds-RUP88694.1;Parent=gene-D8M40_06650;Dbxref=NCBI_GP:RUP88694.1;Name=RUP88694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00766.17;locus_tag=D8M40_06650;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=RUP88694.1;transl_table=11 RBME01000007.1 Genbank gene 61323 62141 . - . ID=gene-D8M40_06655;Name=D8M40_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06655 RBME01000007.1 Protein Homology CDS 61323 62141 . - 0 ID=cds-RUP88695.1;Parent=gene-D8M40_06655;Dbxref=NCBI_GP:RUP88695.1;Name=RUP88695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017204156.1;locus_tag=D8M40_06655;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=RUP88695.1;transl_table=11 RBME01000007.1 Genbank gene 62248 62916 . - . ID=gene-D8M40_06660;Name=D8M40_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06660 RBME01000007.1 Protein Homology CDS 62248 62916 . - 0 ID=cds-RUP88696.1;Parent=gene-D8M40_06660;Dbxref=NCBI_GP:RUP88696.1;Name=RUP88696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187629.1;locus_tag=D8M40_06660;product=TetR/AcrR family transcriptional regulator;protein_id=RUP88696.1;transl_table=11 RBME01000007.1 Genbank gene 63140 63394 . - . ID=gene-D8M40_06665;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=D8M40_06665 RBME01000007.1 Protein Homology CDS 63140 63394 . - 0 ID=cds-RUP88697.1;Parent=gene-D8M40_06665;Dbxref=NCBI_GP:RUP88697.1;Name=RUP88697.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279904.1;locus_tag=D8M40_06665;product=30S ribosomal protein S18;protein_id=RUP88697.1;transl_table=11 RBME01000007.1 Genbank gene 63410 63715 . - . ID=gene-D8M40_06670;Name=D8M40_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06670 RBME01000007.1 Protein Homology CDS 63410 63715 . - 0 ID=cds-RUP88698.1;Parent=gene-D8M40_06670;Dbxref=NCBI_GP:RUP88698.1;Name=RUP88698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297576.1;locus_tag=D8M40_06670;product=30S ribosomal protein S14;protein_id=RUP88698.1;transl_table=11 RBME01000007.1 Genbank gene 63718 63882 . - . ID=gene-D8M40_06675;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D8M40_06675 RBME01000007.1 Protein Homology CDS 63718 63882 . - 0 ID=cds-RUP88699.1;Parent=gene-D8M40_06675;Dbxref=NCBI_GP:RUP88699.1;Name=RUP88699.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279910.1;locus_tag=D8M40_06675;product=50S ribosomal protein L33;protein_id=RUP88699.1;transl_table=11 RBME01000007.1 Genbank gene 63885 64121 . - . ID=gene-D8M40_06680;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=D8M40_06680 RBME01000007.1 Protein Homology CDS 63885 64121 . - 0 ID=cds-RUP88700.1;Parent=gene-D8M40_06680;Dbxref=NCBI_GP:RUP88700.1;Name=RUP88700.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400296.1;locus_tag=D8M40_06680;product=50S ribosomal protein L28;protein_id=RUP88700.1;transl_table=11 RBME01000007.1 Genbank gene 64491 64757 . + . ID=gene-D8M40_06685;Name=D8M40_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06685 RBME01000007.1 Protein Homology CDS 64491 64757 . + 0 ID=cds-RUP88701.1;Parent=gene-D8M40_06685;Dbxref=NCBI_GP:RUP88701.1;Name=RUP88701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323793.1;locus_tag=D8M40_06685;product=type B 50S ribosomal protein L31;protein_id=RUP88701.1;transl_table=11 RBME01000007.1 Genbank gene 64774 64947 . + . ID=gene-D8M40_06690;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=D8M40_06690 RBME01000007.1 Protein Homology CDS 64774 64947 . + 0 ID=cds-RUP88702.1;Parent=gene-D8M40_06690;Dbxref=NCBI_GP:RUP88702.1;Name=RUP88702.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530148.1;locus_tag=D8M40_06690;product=50S ribosomal protein L32;protein_id=RUP88702.1;transl_table=11 RBME01000007.1 Genbank gene 65573 66697 . + . ID=gene-D8M40_06695;Name=D8M40_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06695 RBME01000007.1 Protein Homology CDS 65573 66697 . + 0 ID=cds-RUP88757.1;Parent=gene-D8M40_06695;Dbxref=NCBI_GP:RUP88757.1;Name=RUP88757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400301.1;locus_tag=D8M40_06695;product=PDZ domain-containing protein;protein_id=RUP88757.1;transl_table=11 RBME01000007.1 Genbank gene 66752 67345 . + . ID=gene-D8M40_06700;Name=D8M40_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06700 RBME01000007.1 Protein Homology CDS 66752 67345 . + 0 ID=cds-RUP88703.1;Parent=gene-D8M40_06700;Dbxref=NCBI_GP:RUP88703.1;Name=RUP88703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187605.1;locus_tag=D8M40_06700;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=RUP88703.1;transl_table=11 RBME01000007.1 Genbank gene 67433 67639 . + . ID=gene-D8M40_06705;Name=D8M40_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06705 RBME01000007.1 GeneMarkS+ CDS 67433 67639 . + 0 ID=cds-RUP88704.1;Parent=gene-D8M40_06705;Dbxref=NCBI_GP:RUP88704.1;Name=RUP88704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06705;product=hypothetical protein;protein_id=RUP88704.1;transl_table=11 RBME01000007.1 Genbank gene 67679 68170 . - . ID=gene-D8M40_06710;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=D8M40_06710 RBME01000007.1 Protein Homology CDS 67679 68170 . - 0 ID=cds-RUP88705.1;Parent=gene-D8M40_06710;Dbxref=NCBI_GP:RUP88705.1;Name=RUP88705.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187600.1;locus_tag=D8M40_06710;product=large conductance mechanosensitive channel protein MscL;protein_id=RUP88705.1;transl_table=11 RBME01000007.1 Genbank gene 68205 69125 . - . ID=gene-D8M40_06715;Name=D8M40_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06715 RBME01000007.1 Protein Homology CDS 68205 69125 . - 0 ID=cds-RUP88706.1;Parent=gene-D8M40_06715;Dbxref=NCBI_GP:RUP88706.1;Name=RUP88706.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08666.10;locus_tag=D8M40_06715;product=hypothetical protein;protein_id=RUP88706.1;transl_table=11 RBME01000007.1 Genbank gene 69147 69905 . - . ID=gene-D8M40_06720;Name=D8M40_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06720 RBME01000007.1 Protein Homology CDS 69147 69905 . - 0 ID=cds-RUP88707.1;Parent=gene-D8M40_06720;Dbxref=NCBI_GP:RUP88707.1;Name=RUP88707.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02727;locus_tag=D8M40_06720;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=RUP88707.1;transl_table=11 RBME01000007.1 Genbank gene 70061 71029 . + . ID=gene-D8M40_06725;Name=D8M40_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06725 RBME01000007.1 Protein Homology CDS 70061 71029 . + 0 ID=cds-RUP88708.1;Parent=gene-D8M40_06725;Dbxref=NCBI_GP:RUP88708.1;Name=RUP88708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020384607.1;locus_tag=D8M40_06725;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=RUP88708.1;transl_table=11 RBME01000007.1 Genbank gene 71064 72389 . + . ID=gene-D8M40_06730;Name=D8M40_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06730 RBME01000007.1 Protein Homology CDS 71064 72389 . + 0 ID=cds-RUP88709.1;Parent=gene-D8M40_06730;Dbxref=NCBI_GP:RUP88709.1;Name=RUP88709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846427.1;locus_tag=D8M40_06730;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP88709.1;transl_table=11 RBME01000007.1 Genbank gene 72415 73107 . + . ID=gene-D8M40_06735;Name=D8M40_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06735 RBME01000007.1 Protein Homology CDS 72415 73107 . + 0 ID=cds-RUP88710.1;Parent=gene-D8M40_06735;Dbxref=NCBI_GP:RUP88710.1;Name=RUP88710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121226.1;locus_tag=D8M40_06735;product=N-acetyltransferase;protein_id=RUP88710.1;transl_table=11 RBME01000007.1 Genbank gene 73223 74662 . + . ID=gene-D8M40_06740;Name=D8M40_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06740 RBME01000007.1 GeneMarkS+ CDS 73223 74662 . + 0 ID=cds-RUP88711.1;Parent=gene-D8M40_06740;Dbxref=NCBI_GP:RUP88711.1;Name=RUP88711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06740;product=hypothetical protein;protein_id=RUP88711.1;transl_table=11 RBME01000007.1 Genbank gene 74735 75343 . - . ID=gene-D8M40_06745;Name=D8M40_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06745 RBME01000007.1 Protein Homology CDS 74735 75343 . - 0 ID=cds-RUP88758.1;Parent=gene-D8M40_06745;Dbxref=NCBI_GP:RUP88758.1;Name=RUP88758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003800245.1;locus_tag=D8M40_06745;product=DNA-3-methyladenine glycosylase I;protein_id=RUP88758.1;transl_table=11 RBME01000007.1 Genbank gene 75607 76002 . + . ID=gene-D8M40_06750;Name=D8M40_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06750 RBME01000007.1 Protein Homology CDS 75607 76002 . + 0 ID=cds-RUP88759.1;Parent=gene-D8M40_06750;Dbxref=NCBI_GP:RUP88759.1;Name=RUP88759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858469.1;locus_tag=D8M40_06750;product=DoxX family protein;protein_id=RUP88759.1;transl_table=11 RBME01000007.1 Genbank gene 75989 76699 . + . ID=gene-D8M40_06755;Name=D8M40_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06755 RBME01000007.1 Protein Homology CDS 75989 76699 . + 0 ID=cds-RUP88712.1;Parent=gene-D8M40_06755;Dbxref=NCBI_GP:RUP88712.1;Name=RUP88712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13490.4;locus_tag=D8M40_06755;product=hypothetical protein;protein_id=RUP88712.1;transl_table=11 RBME01000007.1 Genbank gene 76666 78363 . - . ID=gene-D8M40_06760;Name=D8M40_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06760 RBME01000007.1 Protein Homology CDS 76666 78363 . - 0 ID=cds-RUP88713.1;Parent=gene-D8M40_06760;Dbxref=NCBI_GP:RUP88713.1;Name=RUP88713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121231.1;locus_tag=D8M40_06760;product=phospholipid carrier-dependent glycosyltransferase;protein_id=RUP88713.1;transl_table=11 RBME01000007.1 Genbank gene 78449 79327 . + . ID=gene-D8M40_06765;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=D8M40_06765 RBME01000007.1 Protein Homology CDS 78449 79327 . + 0 ID=cds-RUP88714.1;Parent=gene-D8M40_06765;Dbxref=NCBI_GP:RUP88714.1;Name=RUP88714.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121232.1;locus_tag=D8M40_06765;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=RUP88714.1;transl_table=11 RBME01000007.1 Genbank gene 79564 81405 . + . ID=gene-D8M40_06770;Name=D8M40_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06770 RBME01000007.1 Protein Homology CDS 79564 81405 . + 0 ID=cds-RUP88715.1;Parent=gene-D8M40_06770;Dbxref=NCBI_GP:RUP88715.1;Name=RUP88715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297551.1;locus_tag=D8M40_06770;product=BCCT family transporter;protein_id=RUP88715.1;transl_table=11 RBME01000007.1 Genbank gene 81564 83405 . + . ID=gene-D8M40_06775;Name=D8M40_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06775 RBME01000007.1 Protein Homology CDS 81564 83405 . + 0 ID=cds-RUP88716.1;Parent=gene-D8M40_06775;Dbxref=NCBI_GP:RUP88716.1;Name=RUP88716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121234.1;locus_tag=D8M40_06775;product=methionine--tRNA ligase;protein_id=RUP88716.1;transl_table=11 RBME01000007.1 Genbank gene 83477 84811 . + . ID=gene-D8M40_06780;Name=D8M40_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06780 RBME01000007.1 Protein Homology CDS 83477 84811 . + 0 ID=cds-RUP88717.1;Parent=gene-D8M40_06780;Dbxref=NCBI_GP:RUP88717.1;Name=RUP88717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121235.1;locus_tag=D8M40_06780;product=MFS transporter;protein_id=RUP88717.1;transl_table=11 RBME01000007.1 Genbank gene 84890 85735 . + . ID=gene-D8M40_06785;Name=D8M40_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06785 RBME01000007.1 Protein Homology CDS 84890 85735 . + 0 ID=cds-RUP88718.1;Parent=gene-D8M40_06785;Dbxref=NCBI_GP:RUP88718.1;Name=RUP88718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121236.1;locus_tag=D8M40_06785;product=TatD family deoxyribonuclease;protein_id=RUP88718.1;transl_table=11 RBME01000007.1 Genbank gene 86025 87191 . + . ID=gene-D8M40_06790;Name=D8M40_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06790 RBME01000007.1 Protein Homology CDS 86025 87191 . + 0 ID=cds-RUP88719.1;Parent=gene-D8M40_06790;Dbxref=NCBI_GP:RUP88719.1;Name=RUP88719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187555.1;locus_tag=D8M40_06790;product=resuscitation-promoting factor;protein_id=RUP88719.1;transl_table=11 RBME01000007.1 Genbank gene 87211 88125 . + . ID=gene-D8M40_06795;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=D8M40_06795 RBME01000007.1 Protein Homology CDS 87211 88125 . + 0 ID=cds-RUP88720.1;Parent=gene-D8M40_06795;Dbxref=NCBI_GP:RUP88720.1;Name=RUP88720.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400329.1;locus_tag=D8M40_06795;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=RUP88720.1;transl_table=11 RBME01000007.1 Genbank gene 88162 89256 . + . ID=gene-D8M40_06800;Name=D8M40_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06800 RBME01000007.1 Protein Homology CDS 88162 89256 . + 0 ID=cds-RUP88721.1;Parent=gene-D8M40_06800;Dbxref=NCBI_GP:RUP88721.1;Name=RUP88721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530105.1;locus_tag=D8M40_06800;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=RUP88721.1;transl_table=11 RBME01000007.1 Genbank gene 89321 90640 . - . ID=gene-D8M40_06805;Name=D8M40_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06805 RBME01000007.1 Protein Homology CDS 89321 90640 . - 0 ID=cds-RUP88760.1;Parent=gene-D8M40_06805;Dbxref=NCBI_GP:RUP88760.1;Name=RUP88760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282005.1;locus_tag=D8M40_06805;product=hypothetical protein;protein_id=RUP88760.1;transl_table=11 RBME01000007.1 Genbank gene 90837 92678 . + . ID=gene-D8M40_06810;Name=D8M40_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06810 RBME01000007.1 Protein Homology CDS 90837 92678 . + 0 ID=cds-RUP88722.1;Parent=gene-D8M40_06810;Dbxref=NCBI_GP:RUP88722.1;Name=RUP88722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934632.1;locus_tag=D8M40_06810;product=ABC transporter ATP-binding protein;protein_id=RUP88722.1;transl_table=11 RBME01000007.1 Genbank gene 92776 93252 . + . ID=gene-D8M40_06815;Name=D8M40_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06815 RBME01000007.1 GeneMarkS+ CDS 92776 93252 . + 0 ID=cds-RUP88723.1;Parent=gene-D8M40_06815;Dbxref=NCBI_GP:RUP88723.1;Name=RUP88723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06815;product=hypothetical protein;protein_id=RUP88723.1;transl_table=11 RBME01000007.1 Genbank gene 93316 93639 . + . ID=gene-D8M40_06820;Name=D8M40_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06820 RBME01000007.1 Protein Homology CDS 93316 93639 . + 0 ID=cds-RUP88724.1;Parent=gene-D8M40_06820;Dbxref=NCBI_GP:RUP88724.1;Name=RUP88724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016457015.1;locus_tag=D8M40_06820;product=antibiotic biosynthesis monooxygenase;protein_id=RUP88724.1;transl_table=11 RBME01000007.1 Genbank gene 93795 94841 . + . ID=gene-D8M40_06825;Name=D8M40_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06825 RBME01000007.1 Protein Homology CDS 93795 94841 . + 0 ID=cds-RUP88725.1;Parent=gene-D8M40_06825;Dbxref=NCBI_GP:RUP88725.1;Name=RUP88725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121244.1;locus_tag=D8M40_06825;product=enoyl-CoA hydratase/isomerase family protein;protein_id=RUP88725.1;transl_table=11 RBME01000007.1 Genbank gene 94792 95580 . + . ID=gene-D8M40_06830;Name=D8M40_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06830 RBME01000007.1 Protein Homology CDS 94792 95580 . + 0 ID=cds-RUP88726.1;Parent=gene-D8M40_06830;Dbxref=NCBI_GP:RUP88726.1;Name=RUP88726.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07853.9;locus_tag=D8M40_06830;product=DUF1648 domain-containing protein;protein_id=RUP88726.1;transl_table=11 RBME01000007.1 Genbank gene 95651 97834 . - . ID=gene-D8M40_06835;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=D8M40_06835 RBME01000007.1 Protein Homology CDS 95651 97834 . - 0 ID=cds-RUP88727.1;Parent=gene-D8M40_06835;Dbxref=NCBI_GP:RUP88727.1;Name=RUP88727.1;gbkey=CDS;gene=glcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021889.1;locus_tag=D8M40_06835;product=malate synthase G;protein_id=RUP88727.1;transl_table=11 RBME01000007.1 Genbank gene 98263 99555 . + . ID=gene-D8M40_06840;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=D8M40_06840 RBME01000007.1 Protein Homology CDS 98263 99555 . + 0 ID=cds-RUP88728.1;Parent=gene-D8M40_06840;Dbxref=NCBI_GP:RUP88728.1;Name=RUP88728.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601531.1;locus_tag=D8M40_06840;product=isocitrate lyase;protein_id=RUP88728.1;transl_table=11 RBME01000007.1 Genbank gene 99558 100058 . + . ID=gene-D8M40_06845;Name=D8M40_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06845 RBME01000007.1 Protein Homology CDS 99558 100058 . + 0 ID=cds-RUP88729.1;Parent=gene-D8M40_06845;Dbxref=NCBI_GP:RUP88729.1;Name=RUP88729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016422839.1;locus_tag=D8M40_06845;product=RraA family protein;protein_id=RUP88729.1;transl_table=11 RBME01000007.1 Genbank gene 100153 101382 . - . ID=gene-D8M40_06850;Name=D8M40_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06850 RBME01000007.1 GeneMarkS+ CDS 100153 101382 . - 0 ID=cds-RUP88730.1;Parent=gene-D8M40_06850;Dbxref=NCBI_GP:RUP88730.1;Name=RUP88730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06850;product=hypothetical protein;protein_id=RUP88730.1;transl_table=11 RBME01000007.1 Genbank gene 101491 102144 . + . ID=gene-D8M40_06855;Name=D8M40_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06855 RBME01000007.1 Protein Homology CDS 101491 102144 . + 0 ID=cds-RUP88761.1;Parent=gene-D8M40_06855;Dbxref=NCBI_GP:RUP88761.1;Name=RUP88761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400358.1;locus_tag=D8M40_06855;product=hypothetical protein;protein_id=RUP88761.1;transl_table=11 RBME01000007.1 Genbank gene 102165 102536 . - . ID=gene-D8M40_06860;Name=D8M40_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06860 RBME01000007.1 GeneMarkS+ CDS 102165 102536 . - 0 ID=cds-RUP88731.1;Parent=gene-D8M40_06860;Dbxref=NCBI_GP:RUP88731.1;Name=RUP88731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06860;product=hypothetical protein;protein_id=RUP88731.1;transl_table=11 RBME01000007.1 Genbank gene 102612 103481 . + . ID=gene-D8M40_06865;Name=D8M40_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06865 RBME01000007.1 Protein Homology CDS 102612 103481 . + 0 ID=cds-RUP88732.1;Parent=gene-D8M40_06865;Dbxref=NCBI_GP:RUP88732.1;Name=RUP88732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017991.1;locus_tag=D8M40_06865;product=patatin family protein;protein_id=RUP88732.1;transl_table=11 RBME01000007.1 Genbank gene 103701 104126 . + . ID=gene-D8M40_06870;Name=D8M40_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06870 RBME01000007.1 GeneMarkS+ CDS 103701 104126 . + 0 ID=cds-RUP88733.1;Parent=gene-D8M40_06870;Dbxref=NCBI_GP:RUP88733.1;Name=RUP88733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06870;product=hypothetical protein;protein_id=RUP88733.1;transl_table=11 RBME01000007.1 Genbank gene 104204 105787 . + . ID=gene-D8M40_06875;Name=D8M40_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06875 RBME01000007.1 GeneMarkS+ CDS 104204 105787 . + 0 ID=cds-RUP88734.1;Parent=gene-D8M40_06875;Dbxref=NCBI_GP:RUP88734.1;Name=RUP88734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06875;product=hypothetical protein;protein_id=RUP88734.1;transl_table=11 RBME01000007.1 Genbank gene 105816 107462 . - . ID=gene-D8M40_06880;Name=D8M40_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06880 RBME01000007.1 Protein Homology CDS 105816 107462 . - 0 ID=cds-RUP88735.1;Parent=gene-D8M40_06880;Dbxref=NCBI_GP:RUP88735.1;Name=RUP88735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005293392.1;locus_tag=D8M40_06880;product=peptide chain release factor 3;protein_id=RUP88735.1;transl_table=11 RBME01000007.1 Genbank gene 107600 108163 . + . ID=gene-D8M40_06885;Name=D8M40_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06885 RBME01000007.1 Protein Homology CDS 107600 108163 . + 0 ID=cds-RUP88736.1;Parent=gene-D8M40_06885;Dbxref=NCBI_GP:RUP88736.1;Name=RUP88736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03358.13;locus_tag=D8M40_06885;product=NADPH-dependent oxidoreductase;protein_id=RUP88736.1;transl_table=11 RBME01000007.1 Genbank gene 108164 108868 . - . ID=gene-D8M40_06890;Name=D8M40_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06890 RBME01000007.1 Protein Homology CDS 108164 108868 . - 0 ID=cds-RUP88737.1;Parent=gene-D8M40_06890;Dbxref=NCBI_GP:RUP88737.1;Name=RUP88737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187482.1;locus_tag=D8M40_06890;product=aminoacyl-tRNA hydrolase;protein_id=RUP88737.1;transl_table=11 RBME01000007.1 Genbank gene 108946 109944 . + . ID=gene-D8M40_06895;Name=D8M40_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06895 RBME01000007.1 Protein Homology CDS 108946 109944 . + 0 ID=cds-RUP88738.1;Parent=gene-D8M40_06895;Dbxref=NCBI_GP:RUP88738.1;Name=RUP88738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121258.1;locus_tag=D8M40_06895;product=nitronate monooxygenase;protein_id=RUP88738.1;transl_table=11 RBME01000007.1 Genbank gene 110009 111475 . + . ID=gene-D8M40_06900;Name=D8M40_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06900 RBME01000007.1 Protein Homology CDS 110009 111475 . + 0 ID=cds-RUP88739.1;Parent=gene-D8M40_06900;Dbxref=NCBI_GP:RUP88739.1;Name=RUP88739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187479.1;locus_tag=D8M40_06900;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=RUP88739.1;transl_table=11 RBME01000007.1 Genbank gene 111462 111662 . - . ID=gene-D8M40_06905;Name=D8M40_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06905 RBME01000007.1 GeneMarkS+ CDS 111462 111662 . - 0 ID=cds-RUP88740.1;Parent=gene-D8M40_06905;Dbxref=NCBI_GP:RUP88740.1;Name=RUP88740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_06905;product=hypothetical protein;protein_id=RUP88740.1;transl_table=11 RBME01000007.1 Genbank pseudogene 111960 112645 . + . ID=gene-D8M40_06910;Name=D8M40_06910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06910;pseudo=true RBME01000007.1 Protein Homology CDS 111960 112645 . + 0 ID=cds-D8M40_06910;Parent=gene-D8M40_06910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319128.1;locus_tag=D8M40_06910;product=hypothetical protein;pseudo=true;transl_table=11 RBME01000007.1 Genbank gene 113034 114458 . + . ID=gene-D8M40_06915;Name=D8M40_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06915 RBME01000007.1 Protein Homology CDS 113034 114458 . + 0 ID=cds-RUP88741.1;Parent=gene-D8M40_06915;Dbxref=NCBI_GP:RUP88741.1;Name=RUP88741.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13454.4;locus_tag=D8M40_06915;product=hypothetical protein;protein_id=RUP88741.1;transl_table=11 RBME01000007.1 Genbank gene 114476 115657 . + . ID=gene-D8M40_06920;Name=D8M40_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06920 RBME01000007.1 Protein Homology CDS 114476 115657 . + 0 ID=cds-RUP88742.1;Parent=gene-D8M40_06920;Dbxref=NCBI_GP:RUP88742.1;Name=RUP88742.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02786.15;locus_tag=D8M40_06920;product=ATP-grasp domain-containing protein;protein_id=RUP88742.1;transl_table=11 RBME01000007.1 Genbank gene 115657 116889 . + . ID=gene-D8M40_06925;Name=D8M40_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06925 RBME01000007.1 Protein Homology CDS 115657 116889 . + 0 ID=cds-RUP88743.1;Parent=gene-D8M40_06925;Dbxref=NCBI_GP:RUP88743.1;Name=RUP88743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02655.12;locus_tag=D8M40_06925;product=ATP-grasp domain-containing protein;protein_id=RUP88743.1;transl_table=11 RBME01000007.1 Genbank gene 116890 117537 . + . ID=gene-D8M40_06930;Name=D8M40_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06930 RBME01000007.1 Protein Homology CDS 116890 117537 . + 0 ID=cds-RUP88744.1;Parent=gene-D8M40_06930;Dbxref=NCBI_GP:RUP88744.1;Name=RUP88744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00583.23;locus_tag=D8M40_06930;product=GNAT family N-acetyltransferase;protein_id=RUP88744.1;transl_table=11 RBME01000007.1 Genbank gene 117534 118367 . + . ID=gene-D8M40_06935;Name=D8M40_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06935 RBME01000007.1 Protein Homology CDS 117534 118367 . + 0 ID=cds-RUP88745.1;Parent=gene-D8M40_06935;Dbxref=NCBI_GP:RUP88745.1;Name=RUP88745.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01522.19;locus_tag=D8M40_06935;product=hypothetical protein;protein_id=RUP88745.1;transl_table=11 RBME01000007.1 Genbank gene 118364 119557 . + . ID=gene-D8M40_06940;Name=D8M40_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06940 RBME01000007.1 Protein Homology CDS 118364 119557 . + 0 ID=cds-RUP88746.1;Parent=gene-D8M40_06940;Dbxref=NCBI_GP:RUP88746.1;Name=RUP88746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13535.4;locus_tag=D8M40_06940;product=ATP-grasp domain-containing protein;protein_id=RUP88746.1;transl_table=11 RBME01000007.1 Genbank gene 119554 120762 . + . ID=gene-D8M40_06945;Name=D8M40_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06945 RBME01000007.1 Protein Homology CDS 119554 120762 . + 0 ID=cds-RUP88747.1;Parent=gene-D8M40_06945;Dbxref=NCBI_GP:RUP88747.1;Name=RUP88747.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M40_06945;product=MFS transporter;protein_id=RUP88747.1;transl_table=11 RBME01000007.1 Genbank gene 120824 121030 . - . ID=gene-D8M40_06950;Name=D8M40_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06950 RBME01000007.1 Protein Homology CDS 120824 121030 . - 0 ID=cds-RUP88748.1;Parent=gene-D8M40_06950;Dbxref=NCBI_GP:RUP88748.1;Name=RUP88748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019737615.1;locus_tag=D8M40_06950;product=hypothetical protein;protein_id=RUP88748.1;transl_table=11 RBME01000007.1 Genbank pseudogene 121058 122404 . + . ID=gene-D8M40_06955;Name=D8M40_06955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06955;pseudo=true RBME01000007.1 Protein Homology CDS 121058 122404 . + 0 ID=cds-D8M40_06955;Parent=gene-D8M40_06955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M40_06955;product=IS256 family transposase;pseudo=true;transl_table=11 RBME01000007.1 Genbank pseudogene 122559 122982 . + . ID=gene-D8M40_06960;Name=D8M40_06960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06960;pseudo=true RBME01000007.1 Protein Homology CDS 122559 122982 . + 0 ID=cds-D8M40_06960;Parent=gene-D8M40_06960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190703.1;locus_tag=D8M40_06960;product=transposase;pseudo=true;transl_table=11 RBME01000007.1 Genbank gene 123141 123594 . + . ID=gene-D8M40_06965;Name=D8M40_06965;end_range=123594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06965;partial=true RBME01000007.1 Protein Homology CDS 123141 123594 . + 0 ID=cds-RUP88762.1;Parent=gene-D8M40_06965;Dbxref=NCBI_GP:RUP88762.1;Name=RUP88762.1;end_range=123594,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M40_06965;partial=true;product=hypothetical protein;protein_id=RUP88762.1;transl_table=11 ##sequence-region RBME01000080.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000080.1 Genbank region 1 1025 . + . ID=RBME01000080.1:1..1025;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000080.1 Genbank gene 1 984 . + . ID=gene-D8M40_11745;Name=D8M40_11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11745;partial=true;start_range=.,1 RBME01000080.1 Protein Homology CDS 1 984 . + 0 ID=cds-RUP85567.1;Parent=gene-D8M40_11745;Dbxref=NCBI_GP:RUP85567.1;Name=RUP85567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012723396.1;locus_tag=D8M40_11745;partial=true;product=IS481 family transposase;protein_id=RUP85567.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000081.1 1 1023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000081.1 Genbank region 1 1023 . + . ID=RBME01000081.1:1..1023;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000081.1 Genbank pseudogene 6 155 . + . ID=gene-D8M40_11750;Name=D8M40_11750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11750;pseudo=true RBME01000081.1 Protein Homology CDS 6 155 . + 0 ID=cds-D8M40_11750;Parent=gene-D8M40_11750;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003197326.1;locus_tag=D8M40_11750;product=triacylglycerol lipase;pseudo=true;transl_table=11 RBME01000081.1 Genbank gene 168 1023 . - . ID=gene-D8M40_11755;Name=D8M40_11755;end_range=1023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11755;partial=true RBME01000081.1 Protein Homology CDS 168 1023 . - 1 ID=cds-RUP85565.1;Parent=gene-D8M40_11755;Dbxref=NCBI_GP:RUP85565.1;Name=RUP85565.1;end_range=1023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012721955.1;locus_tag=D8M40_11755;partial=true;product=DMT family transporter;protein_id=RUP85565.1;transl_table=11 ##sequence-region RBME01000082.1 1 1007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000082.1 Genbank region 1 1007 . + . ID=RBME01000082.1:1..1007;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000082.1 Genbank gene 1 413 . - . ID=gene-D8M40_11760;Name=D8M40_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11760;partial=true;start_range=.,1 RBME01000082.1 Protein Homology CDS 1 413 . - 0 ID=cds-RUP85562.1;Parent=gene-D8M40_11760;Dbxref=NCBI_GP:RUP85562.1;Name=RUP85562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008014132.1;locus_tag=D8M40_11760;partial=true;product=branched-chain amino acid ABC transporter permease;protein_id=RUP85562.1;start_range=.,1;transl_table=11 RBME01000082.1 Genbank gene 418 1007 . - . ID=gene-D8M40_11765;Name=D8M40_11765;end_range=1007,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11765;partial=true RBME01000082.1 Protein Homology CDS 418 1007 . - 2 ID=cds-RUP85563.1;Parent=gene-D8M40_11765;Dbxref=NCBI_GP:RUP85563.1;Name=RUP85563.1;end_range=1007,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007895472.1;locus_tag=D8M40_11765;partial=true;product=branched-chain amino acid ABC transporter permease;protein_id=RUP85563.1;transl_table=11 ##sequence-region RBME01000083.1 1 1007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000083.1 Genbank region 1 1007 . + . ID=RBME01000083.1:1..1007;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000083.1 Genbank gene 1 1007 . + . ID=gene-D8M40_11770;Name=mltF;end_range=1007,.;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=D8M40_11770;partial=true;start_range=.,1 RBME01000083.1 Protein Homology CDS 1 1007 . + 2 ID=cds-RUP85498.1;Parent=gene-D8M40_11770;Dbxref=NCBI_GP:RUP85498.1;Name=RUP85498.1;end_range=1007,.;gbkey=CDS;gene=mltF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005791148.1;locus_tag=D8M40_11770;partial=true;product=membrane-bound lytic murein transglycosylase MltF;protein_id=RUP85498.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000084.1 1 996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000084.1 Genbank region 1 996 . + . ID=RBME01000084.1:1..996;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000084.1 Genbank gene 21 974 . - . ID=gene-D8M40_11775;Name=D8M40_11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11775 RBME01000084.1 Protein Homology CDS 21 974 . - 0 ID=cds-RUP85494.1;Parent=gene-D8M40_11775;Dbxref=NCBI_GP:RUP85494.1;Name=RUP85494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13535.4;locus_tag=D8M40_11775;product=ATP-grasp domain-containing protein;protein_id=RUP85494.1;transl_table=11 ##sequence-region RBME01000085.1 1 988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000085.1 Genbank region 1 988 . + . ID=RBME01000085.1:1..988;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000085.1 Genbank gene 1 336 . - . ID=gene-D8M40_11780;Name=D8M40_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11780;partial=true;start_range=.,1 RBME01000085.1 Protein Homology CDS 1 336 . - 0 ID=cds-RUP85490.1;Parent=gene-D8M40_11780;Dbxref=NCBI_GP:RUP85490.1;Name=RUP85490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008018844.1;locus_tag=D8M40_11780;partial=true;product=amino acid permease;protein_id=RUP85490.1;start_range=.,1;transl_table=11 RBME01000085.1 Genbank gene 769 988 . - . ID=gene-D8M40_11785;Name=D8M40_11785;end_range=988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11785;partial=true RBME01000085.1 GeneMarkS+ CDS 769 988 . - 1 ID=cds-RUP85491.1;Parent=gene-D8M40_11785;Dbxref=NCBI_GP:RUP85491.1;Name=RUP85491.1;end_range=988,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_11785;partial=true;product=hypothetical protein;protein_id=RUP85491.1;transl_table=11 ##sequence-region RBME01000086.1 1 982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000086.1 Genbank region 1 982 . + . ID=RBME01000086.1:1..982;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000086.1 Genbank pseudogene 1 982 . - . ID=gene-D8M40_11790;Name=D8M40_11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11790;pseudo=true RBME01000086.1 Protein Homology CDS 1 982 . - 0 ID=cds-D8M40_11790;Parent=gene-D8M40_11790;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_251018.1;locus_tag=D8M40_11790;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region RBME01000087.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000087.1 Genbank region 1 979 . + . ID=RBME01000087.1:1..979;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000087.1 Genbank gene 1 114 . + . ID=gene-D8M40_11795;Name=D8M40_11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11795;partial=true;start_range=.,1 RBME01000087.1 Protein Homology CDS 1 114 . + 0 ID=cds-RUP85431.1;Parent=gene-D8M40_11795;Dbxref=NCBI_GP:RUP85431.1;Name=RUP85431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253803.1;locus_tag=D8M40_11795;partial=true;product=GNAT family N-acetyltransferase;protein_id=RUP85431.1;start_range=.,1;transl_table=11 RBME01000087.1 Genbank gene 153 979 . + . ID=gene-D8M40_11800;Name=D8M40_11800;end_range=979,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11800;partial=true RBME01000087.1 Protein Homology CDS 153 979 . + 0 ID=cds-RUP85432.1;Parent=gene-D8M40_11800;Dbxref=NCBI_GP:RUP85432.1;Name=RUP85432.1;end_range=979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008070038.1;locus_tag=D8M40_11800;partial=true;product=acyl-CoA thioesterase II;protein_id=RUP85432.1;transl_table=11 ##sequence-region RBME01000088.1 1 972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000088.1 Genbank region 1 972 . + . ID=RBME01000088.1:1..972;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000088.1 Genbank pseudogene 1 972 . - . ID=gene-D8M40_11805;Name=D8M40_11805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_11805;pseudo=true RBME01000088.1 Protein Homology CDS 1 972 . - 0 ID=cds-D8M40_11805;Parent=gene-D8M40_11805;Note=internal stop%3B incomplete%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017684159.1;locus_tag=D8M40_11805;product=filamentous hemagglutinin;pseudo=true;transl_table=11 ##sequence-region RBME01000089.1 1 970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000089.1 Genbank region 1 970 . + . ID=RBME01000089.1:1..970;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000089.1 Genbank gene 1 748 . - . ID=gene-D8M40_11810;Name=D8M40_11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11810;partial=true;start_range=.,1 RBME01000089.1 Protein Homology CDS 1 748 . - 0 ID=cds-RUP85421.1;Parent=gene-D8M40_11810;Dbxref=NCBI_GP:RUP85421.1;Name=RUP85421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016971387.1;locus_tag=D8M40_11810;partial=true;product=hypothetical protein;protein_id=RUP85421.1;start_range=.,1;transl_table=11 RBME01000089.1 Genbank gene 847 970 . + . ID=gene-D8M40_11815;Name=D8M40_11815;end_range=970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11815;partial=true RBME01000089.1 Protein Homology CDS 847 970 . + 0 ID=cds-RUP85422.1;Parent=gene-D8M40_11815;Dbxref=NCBI_GP:RUP85422.1;Name=RUP85422.1;end_range=970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_793684.1;locus_tag=D8M40_11815;partial=true;product=HNH nuclease family protein;protein_id=RUP85422.1;transl_table=11 ##sequence-region RBME01000008.1 1 111263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000008.1 Genbank region 1 111263 . + . ID=RBME01000008.1:1..111263;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000008.1 Genbank gene 1 113 . - . ID=gene-D8M40_06970;Name=D8M40_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06970;partial=true;start_range=.,1 RBME01000008.1 Protein Homology CDS 1 113 . - 0 ID=cds-RUP88467.1;Parent=gene-D8M40_06970;Dbxref=NCBI_GP:RUP88467.1;Name=RUP88467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M40_06970;partial=true;product=helix-turn-helix domain-containing protein;protein_id=RUP88467.1;start_range=.,1;transl_table=11 RBME01000008.1 Genbank gene 1490 1888 . - . ID=gene-D8M40_06975;Name=D8M40_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06975 RBME01000008.1 Protein Homology CDS 1490 1888 . - 0 ID=cds-RUP88468.1;Parent=gene-D8M40_06975;Dbxref=NCBI_GP:RUP88468.1;Name=RUP88468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M40_06975;product=hypothetical protein;protein_id=RUP88468.1;transl_table=11 RBME01000008.1 Genbank pseudogene 2121 2375 . - . ID=gene-D8M40_06980;Name=D8M40_06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_06980;pseudo=true RBME01000008.1 Protein Homology CDS 2121 2375 . - 0 ID=cds-D8M40_06980;Parent=gene-D8M40_06980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M40_06980;product=transposase;pseudo=true;transl_table=11 RBME01000008.1 Genbank gene 2475 2624 . + . ID=gene-D8M40_06985;Name=D8M40_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06985 RBME01000008.1 Protein Homology CDS 2475 2624 . + 0 ID=cds-RUP88469.1;Parent=gene-D8M40_06985;Dbxref=NCBI_GP:RUP88469.1;Name=RUP88469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=D8M40_06985;product=hypothetical protein;protein_id=RUP88469.1;transl_table=11 RBME01000008.1 Genbank gene 2893 3324 . - . ID=gene-D8M40_06990;Name=D8M40_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06990 RBME01000008.1 Protein Homology CDS 2893 3324 . - 0 ID=cds-RUP88470.1;Parent=gene-D8M40_06990;Dbxref=NCBI_GP:RUP88470.1;Name=RUP88470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846762.1;locus_tag=D8M40_06990;product=deacylase;protein_id=RUP88470.1;transl_table=11 RBME01000008.1 Genbank gene 3344 3943 . - . ID=gene-D8M40_06995;Name=D8M40_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_06995 RBME01000008.1 Protein Homology CDS 3344 3943 . - 0 ID=cds-RUP88471.1;Parent=gene-D8M40_06995;Dbxref=NCBI_GP:RUP88471.1;Name=RUP88471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01810.16;locus_tag=D8M40_06995;product=hypothetical protein;protein_id=RUP88471.1;transl_table=11 RBME01000008.1 Genbank gene 4012 4833 . - . ID=gene-D8M40_07000;Name=D8M40_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07000 RBME01000008.1 GeneMarkS+ CDS 4012 4833 . - 0 ID=cds-RUP88472.1;Parent=gene-D8M40_07000;Dbxref=NCBI_GP:RUP88472.1;Name=RUP88472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07000;product=hypothetical protein;protein_id=RUP88472.1;transl_table=11 RBME01000008.1 Genbank gene 5139 5215 . - . ID=gene-D8M40_07005;Name=D8M40_07005;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07005 RBME01000008.1 tRNAscan-SE tRNA 5139 5215 . - . ID=rna-D8M40_07005;Parent=gene-D8M40_07005;anticodon=(pos:complement(5179..5181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07005;product=tRNA-Met RBME01000008.1 tRNAscan-SE exon 5139 5215 . - . ID=exon-D8M40_07005-1;Parent=rna-D8M40_07005;anticodon=(pos:complement(5179..5181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07005;product=tRNA-Met RBME01000008.1 Genbank gene 5383 8388 . - . ID=gene-D8M40_07010;Name=D8M40_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07010 RBME01000008.1 Protein Homology CDS 5383 8388 . - 0 ID=cds-RUP88551.1;Parent=gene-D8M40_07010;Dbxref=NCBI_GP:RUP88551.1;Name=RUP88551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121019.1;locus_tag=D8M40_07010;product=UPF0182 family protein;protein_id=RUP88551.1;transl_table=11 RBME01000008.1 Genbank gene 8512 9159 . + . ID=gene-D8M40_07015;Name=D8M40_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07015 RBME01000008.1 Protein Homology CDS 8512 9159 . + 0 ID=cds-RUP88473.1;Parent=gene-D8M40_07015;Dbxref=NCBI_GP:RUP88473.1;Name=RUP88473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121018.1;locus_tag=D8M40_07015;product=hypothetical protein;protein_id=RUP88473.1;transl_table=11 RBME01000008.1 Genbank gene 9222 9941 . + . ID=gene-D8M40_07020;Name=D8M40_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07020 RBME01000008.1 GeneMarkS+ CDS 9222 9941 . + 0 ID=cds-RUP88474.1;Parent=gene-D8M40_07020;Dbxref=NCBI_GP:RUP88474.1;Name=RUP88474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07020;product=beta-N-acetylglucosaminidase;protein_id=RUP88474.1;transl_table=11 RBME01000008.1 Genbank gene 9963 11000 . - . ID=gene-D8M40_07025;Name=D8M40_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07025 RBME01000008.1 Protein Homology CDS 9963 11000 . - 0 ID=cds-RUP88552.1;Parent=gene-D8M40_07025;Dbxref=NCBI_GP:RUP88552.1;Name=RUP88552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400209.1;locus_tag=D8M40_07025;product=PDZ domain-containing protein;protein_id=RUP88552.1;transl_table=11 RBME01000008.1 Genbank gene 11190 12626 . + . ID=gene-D8M40_07030;Name=D8M40_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07030 RBME01000008.1 Protein Homology CDS 11190 12626 . + 0 ID=cds-RUP88475.1;Parent=gene-D8M40_07030;Dbxref=NCBI_GP:RUP88475.1;Name=RUP88475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121015.1;locus_tag=D8M40_07030;product=hydrolase;protein_id=RUP88475.1;transl_table=11 RBME01000008.1 Genbank gene 12687 13619 . + . ID=gene-D8M40_07035;Name=D8M40_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07035 RBME01000008.1 GeneMarkS+ CDS 12687 13619 . + 0 ID=cds-RUP88476.1;Parent=gene-D8M40_07035;Dbxref=NCBI_GP:RUP88476.1;Name=RUP88476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07035;product=hypothetical protein;protein_id=RUP88476.1;transl_table=11 RBME01000008.1 Genbank gene 13546 15594 . - . ID=gene-D8M40_07040;Name=D8M40_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07040 RBME01000008.1 Protein Homology CDS 13546 15594 . - 0 ID=cds-RUP88477.1;Parent=gene-D8M40_07040;Dbxref=NCBI_GP:RUP88477.1;Name=RUP88477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121013.1;locus_tag=D8M40_07040;product=ATP-dependent DNA helicase UvrD2;protein_id=RUP88477.1;transl_table=11 RBME01000008.1 Genbank gene 15605 16846 . - . ID=gene-D8M40_07045;Name=D8M40_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07045 RBME01000008.1 Protein Homology CDS 15605 16846 . - 0 ID=cds-RUP88478.1;Parent=gene-D8M40_07045;Dbxref=NCBI_GP:RUP88478.1;Name=RUP88478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296164.1;locus_tag=D8M40_07045;product=Ion channel protein;protein_id=RUP88478.1;transl_table=11 RBME01000008.1 Genbank gene 16858 20388 . - . ID=gene-D8M40_07050;Name=D8M40_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07050 RBME01000008.1 Protein Homology CDS 16858 20388 . - 0 ID=cds-RUP88479.1;Parent=gene-D8M40_07050;Dbxref=NCBI_GP:RUP88479.1;Name=RUP88479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121011.1;locus_tag=D8M40_07050;product=ATP-dependent helicase;protein_id=RUP88479.1;transl_table=11 RBME01000008.1 Genbank gene 20381 23692 . - . ID=gene-D8M40_07055;Name=D8M40_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07055 RBME01000008.1 Protein Homology CDS 20381 23692 . - 0 ID=cds-RUP88480.1;Parent=gene-D8M40_07055;Dbxref=NCBI_GP:RUP88480.1;Name=RUP88480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021108.1;locus_tag=D8M40_07055;product=ATP-dependent helicase;protein_id=RUP88480.1;transl_table=11 RBME01000008.1 Genbank gene 23696 24451 . - . ID=gene-D8M40_07060;Name=D8M40_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07060 RBME01000008.1 Protein Homology CDS 23696 24451 . - 0 ID=cds-RUP88481.1;Parent=gene-D8M40_07060;Dbxref=NCBI_GP:RUP88481.1;Name=RUP88481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322366.1;locus_tag=D8M40_07060;product=hypothetical protein;protein_id=RUP88481.1;transl_table=11 RBME01000008.1 Genbank gene 24460 25407 . - . ID=gene-D8M40_07065;Name=D8M40_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07065 RBME01000008.1 Protein Homology CDS 24460 25407 . - 0 ID=cds-RUP88482.1;Parent=gene-D8M40_07065;Dbxref=NCBI_GP:RUP88482.1;Name=RUP88482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189157.1;locus_tag=D8M40_07065;product=DUF3152 domain-containing protein;protein_id=RUP88482.1;transl_table=11 RBME01000008.1 Genbank gene 25466 25693 . - . ID=gene-D8M40_07070;Name=D8M40_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07070 RBME01000008.1 Protein Homology CDS 25466 25693 . - 0 ID=cds-RUP88483.1;Parent=gene-D8M40_07070;Dbxref=NCBI_GP:RUP88483.1;Name=RUP88483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011558807.1;locus_tag=D8M40_07070;product=DUF3107 domain-containing protein;protein_id=RUP88483.1;transl_table=11 RBME01000008.1 Genbank gene 25929 27278 . + . ID=gene-D8M40_07075;Name=D8M40_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07075 RBME01000008.1 Protein Homology CDS 25929 27278 . + 0 ID=cds-RUP88484.1;Parent=gene-D8M40_07075;Dbxref=NCBI_GP:RUP88484.1;Name=RUP88484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277548.1;locus_tag=D8M40_07075;product=DEAD/DEAH box helicase;protein_id=RUP88484.1;transl_table=11 RBME01000008.1 Genbank gene 27278 28576 . + . ID=gene-D8M40_07080;Name=D8M40_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07080 RBME01000008.1 Protein Homology CDS 27278 28576 . + 0 ID=cds-RUP88485.1;Parent=gene-D8M40_07080;Dbxref=NCBI_GP:RUP88485.1;Name=RUP88485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528185.1;locus_tag=D8M40_07080;product=hypothetical protein;protein_id=RUP88485.1;transl_table=11 RBME01000008.1 Genbank gene 28595 29044 . - . ID=gene-D8M40_07085;Name=D8M40_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07085 RBME01000008.1 GeneMarkS+ CDS 28595 29044 . - 0 ID=cds-RUP88486.1;Parent=gene-D8M40_07085;Dbxref=NCBI_GP:RUP88486.1;Name=RUP88486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07085;product=hypothetical protein;protein_id=RUP88486.1;transl_table=11 RBME01000008.1 Genbank gene 29307 29489 . - . ID=gene-D8M40_07090;Name=D8M40_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07090 RBME01000008.1 GeneMarkS+ CDS 29307 29489 . - 0 ID=cds-RUP88487.1;Parent=gene-D8M40_07090;Dbxref=NCBI_GP:RUP88487.1;Name=RUP88487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07090;product=hypothetical protein;protein_id=RUP88487.1;transl_table=11 RBME01000008.1 Genbank gene 29536 29796 . + . ID=gene-D8M40_07095;Name=D8M40_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07095 RBME01000008.1 Protein Homology CDS 29536 29796 . + 0 ID=cds-RUP88488.1;Parent=gene-D8M40_07095;Dbxref=NCBI_GP:RUP88488.1;Name=RUP88488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322377.1;locus_tag=D8M40_07095;product=WhiB family transcriptional regulator;protein_id=RUP88488.1;transl_table=11 RBME01000008.1 Genbank gene 30222 30590 . - . ID=gene-D8M40_07100;Name=D8M40_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07100 RBME01000008.1 GeneMarkS+ CDS 30222 30590 . - 0 ID=cds-RUP88489.1;Parent=gene-D8M40_07100;Dbxref=NCBI_GP:RUP88489.1;Name=RUP88489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07100;product=hypothetical protein;protein_id=RUP88489.1;transl_table=11 RBME01000008.1 Genbank gene 30590 31294 . - . ID=gene-D8M40_07105;Name=D8M40_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07105 RBME01000008.1 Protein Homology CDS 30590 31294 . - 0 ID=cds-RUP88490.1;Parent=gene-D8M40_07105;Dbxref=NCBI_GP:RUP88490.1;Name=RUP88490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934497.1;locus_tag=D8M40_07105;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP88490.1;transl_table=11 RBME01000008.1 Genbank gene 31335 32624 . + . ID=gene-D8M40_07110;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=D8M40_07110 RBME01000008.1 Protein Homology CDS 31335 32624 . + 0 ID=cds-RUP88491.1;Parent=gene-D8M40_07110;Dbxref=NCBI_GP:RUP88491.1;Name=RUP88491.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910964.1;locus_tag=D8M40_07110;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=RUP88491.1;transl_table=11 RBME01000008.1 Genbank gene 32625 33665 . + . ID=gene-D8M40_07115;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=D8M40_07115 RBME01000008.1 Protein Homology CDS 32625 33665 . + 0 ID=cds-RUP88492.1;Parent=gene-D8M40_07115;Dbxref=NCBI_GP:RUP88492.1;Name=RUP88492.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322389.1;locus_tag=D8M40_07115;product=ribosome small subunit-dependent GTPase A;protein_id=RUP88492.1;transl_table=11 RBME01000008.1 Genbank gene 33747 34253 . - . ID=gene-D8M40_07120;Name=D8M40_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07120 RBME01000008.1 Protein Homology CDS 33747 34253 . - 0 ID=cds-RUP88493.1;Parent=gene-D8M40_07120;Dbxref=NCBI_GP:RUP88493.1;Name=RUP88493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458805.1;locus_tag=D8M40_07120;product=hypothetical protein;protein_id=RUP88493.1;transl_table=11 RBME01000008.1 Genbank gene 34255 34665 . - . ID=gene-D8M40_07125;Name=D8M40_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07125 RBME01000008.1 Protein Homology CDS 34255 34665 . - 0 ID=cds-RUP88494.1;Parent=gene-D8M40_07125;Dbxref=NCBI_GP:RUP88494.1;Name=RUP88494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528174.1;locus_tag=D8M40_07125;product=HAD family hydrolase;protein_id=RUP88494.1;transl_table=11 RBME01000008.1 Genbank gene 34830 35285 . + . ID=gene-D8M40_07130;Name=D8M40_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07130 RBME01000008.1 GeneMarkS+ CDS 34830 35285 . + 0 ID=cds-RUP88495.1;Parent=gene-D8M40_07130;Dbxref=NCBI_GP:RUP88495.1;Name=RUP88495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07130;product=hypothetical protein;protein_id=RUP88495.1;transl_table=11 RBME01000008.1 Genbank gene 35330 37927 . - . ID=gene-D8M40_07135;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=D8M40_07135 RBME01000008.1 Protein Homology CDS 35330 37927 . - 0 ID=cds-RUP88553.1;Parent=gene-D8M40_07135;Dbxref=NCBI_GP:RUP88553.1;Name=RUP88553.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821994.1;locus_tag=D8M40_07135;product=preprotein translocase subunit SecA;protein_id=RUP88553.1;transl_table=11 RBME01000008.1 Genbank gene 38100 38777 . - . ID=gene-D8M40_07140;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=D8M40_07140 RBME01000008.1 Protein Homology CDS 38100 38777 . - 0 ID=cds-RUP88496.1;Parent=gene-D8M40_07140;Dbxref=NCBI_GP:RUP88496.1;Name=RUP88496.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581467.1;locus_tag=D8M40_07140;product=ribosome-associated translation inhibitor RaiA;protein_id=RUP88496.1;transl_table=11 RBME01000008.1 Genbank gene 38924 39571 . - . ID=gene-D8M40_07145;Name=D8M40_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07145 RBME01000008.1 Protein Homology CDS 38924 39571 . - 0 ID=cds-RUP88497.1;Parent=gene-D8M40_07145;Dbxref=NCBI_GP:RUP88497.1;Name=RUP88497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286089.1;locus_tag=D8M40_07145;product=ComF family protein;protein_id=RUP88497.1;transl_table=11 RBME01000008.1 Genbank gene 39598 41415 . - . ID=gene-D8M40_07150;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=D8M40_07150 RBME01000008.1 Protein Homology CDS 39598 41415 . - 0 ID=cds-RUP88498.1;Parent=gene-D8M40_07150;Dbxref=NCBI_GP:RUP88498.1;Name=RUP88498.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120992.1;locus_tag=D8M40_07150;product=MtrAB system accessory protein LpqB;protein_id=RUP88498.1;transl_table=11 RBME01000008.1 Genbank gene 41381 42925 . - . ID=gene-D8M40_07155;Name=D8M40_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07155 RBME01000008.1 Protein Homology CDS 41381 42925 . - 0 ID=cds-RUP88554.1;Parent=gene-D8M40_07155;Dbxref=NCBI_GP:RUP88554.1;Name=RUP88554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189191.1;locus_tag=D8M40_07155;product=sensor histidine kinase;protein_id=RUP88554.1;transl_table=11 RBME01000008.1 Genbank gene 43129 43833 . - . ID=gene-D8M40_07160;Name=D8M40_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07160 RBME01000008.1 Protein Homology CDS 43129 43833 . - 0 ID=cds-RUP88499.1;Parent=gene-D8M40_07160;Dbxref=NCBI_GP:RUP88499.1;Name=RUP88499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821989.1;locus_tag=D8M40_07160;product=DNA-binding response regulator;protein_id=RUP88499.1;transl_table=11 RBME01000008.1 Genbank gene 43808 44563 . - . ID=gene-D8M40_07165;Name=D8M40_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07165 RBME01000008.1 Protein Homology CDS 43808 44563 . - 0 ID=cds-RUP88500.1;Parent=gene-D8M40_07165;Dbxref=NCBI_GP:RUP88500.1;Name=RUP88500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120989.1;locus_tag=D8M40_07165;product=dTMP kinase;protein_id=RUP88500.1;transl_table=11 RBME01000008.1 Genbank gene 44560 44910 . - . ID=gene-D8M40_07170;Name=D8M40_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07170 RBME01000008.1 Protein Homology CDS 44560 44910 . - 0 ID=cds-RUP88501.1;Parent=gene-D8M40_07170;Dbxref=NCBI_GP:RUP88501.1;Name=RUP88501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821987.1;locus_tag=D8M40_07170;product=DUF4259 domain-containing protein;protein_id=RUP88501.1;transl_table=11 RBME01000008.1 Genbank gene 45102 46217 . + . ID=gene-D8M40_07175;Name=D8M40_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07175 RBME01000008.1 GeneMarkS+ CDS 45102 46217 . + 0 ID=cds-RUP88502.1;Parent=gene-D8M40_07175;Dbxref=NCBI_GP:RUP88502.1;Name=RUP88502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07175;product=hypothetical protein;protein_id=RUP88502.1;transl_table=11 RBME01000008.1 Genbank gene 46291 47538 . - . ID=gene-D8M40_07180;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=D8M40_07180 RBME01000008.1 Protein Homology CDS 46291 47538 . - 0 ID=cds-RUP88503.1;Parent=gene-D8M40_07180;Dbxref=NCBI_GP:RUP88503.1;Name=RUP88503.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836074.1;locus_tag=D8M40_07180;product=mannose-6-phosphate isomerase%2C class I;protein_id=RUP88503.1;transl_table=11 RBME01000008.1 Genbank gene 47595 48989 . - . ID=gene-D8M40_07185;Name=D8M40_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07185 RBME01000008.1 Protein Homology CDS 47595 48989 . - 0 ID=cds-RUP88504.1;Parent=gene-D8M40_07185;Dbxref=NCBI_GP:RUP88504.1;Name=RUP88504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120985.1;locus_tag=D8M40_07185;product=phosphomannomutase/phosphoglucomutase;protein_id=RUP88504.1;transl_table=11 RBME01000008.1 Genbank gene 49117 49830 . - . ID=gene-D8M40_07190;Name=D8M40_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07190 RBME01000008.1 Protein Homology CDS 49117 49830 . - 0 ID=cds-RUP88555.1;Parent=gene-D8M40_07190;Dbxref=NCBI_GP:RUP88555.1;Name=RUP88555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599975.1;locus_tag=D8M40_07190;product=DUF3499 domain-containing protein;protein_id=RUP88555.1;transl_table=11 RBME01000008.1 Genbank gene 49968 50441 . + . ID=gene-D8M40_07195;Name=D8M40_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07195 RBME01000008.1 Protein Homology CDS 49968 50441 . + 0 ID=cds-RUP88505.1;Parent=gene-D8M40_07195;Dbxref=NCBI_GP:RUP88505.1;Name=RUP88505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322429.1;locus_tag=D8M40_07195;product=metallopeptidase family protein;protein_id=RUP88505.1;transl_table=11 RBME01000008.1 Genbank gene 50490 50786 . - . ID=gene-D8M40_07200;Name=D8M40_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07200 RBME01000008.1 Protein Homology CDS 50490 50786 . - 0 ID=cds-RUP88506.1;Parent=gene-D8M40_07200;Dbxref=NCBI_GP:RUP88506.1;Name=RUP88506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296130.1;locus_tag=D8M40_07200;product=WhiB family transcriptional regulator;protein_id=RUP88506.1;transl_table=11 RBME01000008.1 Genbank gene 51073 52143 . - . ID=gene-D8M40_07205;Name=D8M40_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07205 RBME01000008.1 Protein Homology CDS 51073 52143 . - 0 ID=cds-RUP88507.1;Parent=gene-D8M40_07205;Dbxref=NCBI_GP:RUP88507.1;Name=RUP88507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400162.1;locus_tag=D8M40_07205;product=NDP-sugar synthase;protein_id=RUP88507.1;transl_table=11 RBME01000008.1 Genbank gene 52250 53164 . - . ID=gene-D8M40_07210;Name=D8M40_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07210 RBME01000008.1 Protein Homology CDS 52250 53164 . - 0 ID=cds-RUP88556.1;Parent=gene-D8M40_07210;Dbxref=NCBI_GP:RUP88556.1;Name=RUP88556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277483.1;locus_tag=D8M40_07210;product=glycosyltransferase family 2 protein;protein_id=RUP88556.1;transl_table=11 RBME01000008.1 Genbank gene 53236 54891 . + . ID=gene-D8M40_07215;Name=D8M40_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07215 RBME01000008.1 Protein Homology CDS 53236 54891 . + 0 ID=cds-RUP88557.1;Parent=gene-D8M40_07215;Dbxref=NCBI_GP:RUP88557.1;Name=RUP88557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189221.1;locus_tag=D8M40_07215;product=LytR family transcriptional regulator;protein_id=RUP88557.1;transl_table=11 RBME01000008.1 Genbank gene 55014 55706 . + . ID=gene-D8M40_07220;Name=D8M40_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07220 RBME01000008.1 Protein Homology CDS 55014 55706 . + 0 ID=cds-RUP88508.1;Parent=gene-D8M40_07220;Dbxref=NCBI_GP:RUP88508.1;Name=RUP88508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120978.1;locus_tag=D8M40_07220;product=TIGR03089 family protein;protein_id=RUP88508.1;transl_table=11 RBME01000008.1 Genbank gene 55810 56988 . + . ID=gene-D8M40_07225;Name=D8M40_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07225 RBME01000008.1 Protein Homology CDS 55810 56988 . + 0 ID=cds-RUP88509.1;Parent=gene-D8M40_07225;Dbxref=NCBI_GP:RUP88509.1;Name=RUP88509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120977.1;locus_tag=D8M40_07225;product=acetyl-CoA C-acyltransferase;protein_id=RUP88509.1;transl_table=11 RBME01000008.1 Genbank gene 56991 59291 . + . ID=gene-D8M40_07230;Name=D8M40_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07230 RBME01000008.1 Protein Homology CDS 56991 59291 . + 0 ID=cds-RUP88510.1;Parent=gene-D8M40_07230;Dbxref=NCBI_GP:RUP88510.1;Name=RUP88510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120976.1;locus_tag=D8M40_07230;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=RUP88510.1;transl_table=11 RBME01000008.1 Genbank gene 59569 59790 . - . ID=gene-D8M40_07235;Name=D8M40_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07235 RBME01000008.1 GeneMarkS+ CDS 59569 59790 . - 0 ID=cds-RUP88511.1;Parent=gene-D8M40_07235;Dbxref=NCBI_GP:RUP88511.1;Name=RUP88511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07235;product=hypothetical protein;protein_id=RUP88511.1;transl_table=11 RBME01000008.1 Genbank gene 59980 61155 . - . ID=gene-D8M40_07240;Name=D8M40_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07240 RBME01000008.1 Protein Homology CDS 59980 61155 . - 0 ID=cds-RUP88512.1;Parent=gene-D8M40_07240;Dbxref=NCBI_GP:RUP88512.1;Name=RUP88512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189325.1;locus_tag=D8M40_07240;product=acyl-CoA dehydrogenase;protein_id=RUP88512.1;transl_table=11 RBME01000008.1 Genbank pseudogene 61365 61978 . + . ID=gene-D8M40_07245;Name=D8M40_07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_07245;pseudo=true RBME01000008.1 Protein Homology CDS 61365 61978 . + 0 ID=cds-D8M40_07245;Parent=gene-D8M40_07245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189326.1;locus_tag=D8M40_07245;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 RBME01000008.1 Genbank gene 61999 62877 . - . ID=gene-D8M40_07250;Name=D8M40_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07250 RBME01000008.1 Protein Homology CDS 61999 62877 . - 0 ID=cds-RUP88513.1;Parent=gene-D8M40_07250;Dbxref=NCBI_GP:RUP88513.1;Name=RUP88513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03328.12;locus_tag=D8M40_07250;product=CoA ester lyase;protein_id=RUP88513.1;transl_table=11 RBME01000008.1 Genbank gene 63156 64502 . - . ID=gene-D8M40_07255;Name=D8M40_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07255 RBME01000008.1 Protein Homology CDS 63156 64502 . - 0 ID=cds-RUP88558.1;Parent=gene-D8M40_07255;Dbxref=NCBI_GP:RUP88558.1;Name=RUP88558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821374.1;locus_tag=D8M40_07255;product=amidohydrolase;protein_id=RUP88558.1;transl_table=11 RBME01000008.1 Genbank gene 64752 66599 . - . ID=gene-D8M40_07260;Name=D8M40_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07260 RBME01000008.1 Protein Homology CDS 64752 66599 . - 0 ID=cds-RUP88514.1;Parent=gene-D8M40_07260;Dbxref=NCBI_GP:RUP88514.1;Name=RUP88514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849366.1;locus_tag=D8M40_07260;product=elongation factor 4;protein_id=RUP88514.1;transl_table=11 RBME01000008.1 Genbank gene 66704 67240 . + . ID=gene-D8M40_07265;Name=D8M40_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07265 RBME01000008.1 Protein Homology CDS 66704 67240 . + 0 ID=cds-RUP88515.1;Parent=gene-D8M40_07265;Dbxref=NCBI_GP:RUP88515.1;Name=RUP88515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120968.1;locus_tag=D8M40_07265;product=hypothetical protein;protein_id=RUP88515.1;transl_table=11 RBME01000008.1 Genbank gene 67440 67706 . + . ID=gene-D8M40_07270;Name=D8M40_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07270 RBME01000008.1 Protein Homology CDS 67440 67706 . + 0 ID=cds-RUP88516.1;Parent=gene-D8M40_07270;Dbxref=NCBI_GP:RUP88516.1;Name=RUP88516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016422323.1;locus_tag=D8M40_07270;product=30S ribosomal protein S20;protein_id=RUP88516.1;transl_table=11 RBME01000008.1 Genbank gene 70227 70877 . - . ID=gene-D8M40_07275;Name=D8M40_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07275 RBME01000008.1 Protein Homology CDS 70227 70877 . - 0 ID=cds-RUP88517.1;Parent=gene-D8M40_07275;Dbxref=NCBI_GP:RUP88517.1;Name=RUP88517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401589.1;locus_tag=D8M40_07275;product=LysE family translocator;protein_id=RUP88517.1;transl_table=11 RBME01000008.1 Genbank gene 70874 71350 . - . ID=gene-D8M40_07280;Name=D8M40_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07280 RBME01000008.1 Protein Homology CDS 70874 71350 . - 0 ID=cds-RUP88518.1;Parent=gene-D8M40_07280;Dbxref=NCBI_GP:RUP88518.1;Name=RUP88518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528326.1;locus_tag=D8M40_07280;product=ankyrin repeat domain-containing protein;protein_id=RUP88518.1;transl_table=11 RBME01000008.1 Genbank gene 71363 72313 . - . ID=gene-D8M40_07285;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=D8M40_07285 RBME01000008.1 Protein Homology CDS 71363 72313 . - 0 ID=cds-RUP88559.1;Parent=gene-D8M40_07285;Dbxref=NCBI_GP:RUP88559.1;Name=RUP88559.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401591.1;locus_tag=D8M40_07285;product=DNA polymerase III subunit delta;protein_id=RUP88559.1;transl_table=11 RBME01000008.1 Genbank gene 72338 74077 . - . ID=gene-D8M40_07290;Name=D8M40_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07290 RBME01000008.1 Protein Homology CDS 72338 74077 . - 0 ID=cds-RUP88519.1;Parent=gene-D8M40_07290;Dbxref=NCBI_GP:RUP88519.1;Name=RUP88519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03772.14;locus_tag=D8M40_07290;product=ComEC/Rec2 family competence protein;protein_id=RUP88519.1;transl_table=11 RBME01000008.1 Genbank gene 74087 74908 . - . ID=gene-D8M40_07295;Name=D8M40_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07295 RBME01000008.1 Protein Homology CDS 74087 74908 . - 0 ID=cds-RUP88520.1;Parent=gene-D8M40_07295;Dbxref=NCBI_GP:RUP88520.1;Name=RUP88520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821363.1;locus_tag=D8M40_07295;product=hypothetical protein;protein_id=RUP88520.1;transl_table=11 RBME01000008.1 Genbank gene 75048 75857 . - . ID=gene-D8M40_07300;Name=D8M40_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07300 RBME01000008.1 Protein Homology CDS 75048 75857 . - 0 ID=cds-RUP88521.1;Parent=gene-D8M40_07300;Dbxref=NCBI_GP:RUP88521.1;Name=RUP88521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821362.1;locus_tag=D8M40_07300;product=DegV family protein;protein_id=RUP88521.1;transl_table=11 RBME01000008.1 Genbank gene 75858 76535 . - . ID=gene-D8M40_07305;Name=D8M40_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07305 RBME01000008.1 Protein Homology CDS 75858 76535 . - 0 ID=cds-RUP88522.1;Parent=gene-D8M40_07305;Dbxref=NCBI_GP:RUP88522.1;Name=RUP88522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120957.1;locus_tag=D8M40_07305;product=histidine phosphatase family protein;protein_id=RUP88522.1;transl_table=11 RBME01000008.1 Genbank gene 76532 76990 . - . ID=gene-D8M40_07310;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=D8M40_07310 RBME01000008.1 Protein Homology CDS 76532 76990 . - 0 ID=cds-RUP88523.1;Parent=gene-D8M40_07310;Dbxref=NCBI_GP:RUP88523.1;Name=RUP88523.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120956.1;locus_tag=D8M40_07310;product=ribosome silencing factor;protein_id=RUP88523.1;transl_table=11 RBME01000008.1 Genbank gene 77089 77745 . - . ID=gene-D8M40_07315;Name=D8M40_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07315 RBME01000008.1 Protein Homology CDS 77089 77745 . - 0 ID=cds-RUP88524.1;Parent=gene-D8M40_07315;Dbxref=NCBI_GP:RUP88524.1;Name=RUP88524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120955.1;locus_tag=D8M40_07315;product=nicotinate-nucleotide adenylyltransferase;protein_id=RUP88524.1;transl_table=11 RBME01000008.1 Genbank gene 77832 78341 . - . ID=gene-D8M40_07320;Name=D8M40_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07320 RBME01000008.1 GeneMarkS+ CDS 77832 78341 . - 0 ID=cds-RUP88525.1;Parent=gene-D8M40_07320;Dbxref=NCBI_GP:RUP88525.1;Name=RUP88525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07320;product=hypothetical protein;protein_id=RUP88525.1;transl_table=11 RBME01000008.1 Genbank gene 78384 79685 . - . ID=gene-D8M40_07325;Name=D8M40_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07325 RBME01000008.1 Protein Homology CDS 78384 79685 . - 0 ID=cds-RUP88526.1;Parent=gene-D8M40_07325;Dbxref=NCBI_GP:RUP88526.1;Name=RUP88526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768265.1;locus_tag=D8M40_07325;product=glutamate-5-semialdehyde dehydrogenase;protein_id=RUP88526.1;transl_table=11 RBME01000008.1 Genbank gene 79704 80612 . - . ID=gene-D8M40_07330;Name=D8M40_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07330 RBME01000008.1 Protein Homology CDS 79704 80612 . - 0 ID=cds-RUP88527.1;Parent=gene-D8M40_07330;Dbxref=NCBI_GP:RUP88527.1;Name=RUP88527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120952.1;locus_tag=D8M40_07330;product=hypothetical protein;protein_id=RUP88527.1;transl_table=11 RBME01000008.1 Genbank gene 80712 81950 . - . ID=gene-D8M40_07335;Name=D8M40_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07335 RBME01000008.1 Protein Homology CDS 80712 81950 . - 0 ID=cds-RUP88528.1;Parent=gene-D8M40_07335;Dbxref=NCBI_GP:RUP88528.1;Name=RUP88528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011897690.1;locus_tag=D8M40_07335;product=glutamate 5-kinase;protein_id=RUP88528.1;transl_table=11 RBME01000008.1 Genbank gene 82039 83568 . - . ID=gene-D8M40_07340;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=D8M40_07340 RBME01000008.1 Protein Homology CDS 82039 83568 . - 0 ID=cds-RUP88529.1;Parent=gene-D8M40_07340;Dbxref=NCBI_GP:RUP88529.1;Name=RUP88529.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329223.1;locus_tag=D8M40_07340;product=GTPase ObgE;protein_id=RUP88529.1;transl_table=11 RBME01000008.1 Genbank gene 83693 83971 . - . ID=gene-D8M40_07345;Name=D8M40_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07345 RBME01000008.1 Protein Homology CDS 83693 83971 . - 0 ID=cds-RUP88530.1;Parent=gene-D8M40_07345;Dbxref=NCBI_GP:RUP88530.1;Name=RUP88530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190882.1;locus_tag=D8M40_07345;product=50S ribosomal protein L27;protein_id=RUP88530.1;transl_table=11 RBME01000008.1 Genbank gene 83992 84297 . - . ID=gene-D8M40_07350;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=D8M40_07350 RBME01000008.1 Protein Homology CDS 83992 84297 . - 0 ID=cds-RUP88531.1;Parent=gene-D8M40_07350;Dbxref=NCBI_GP:RUP88531.1;Name=RUP88531.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006064165.1;locus_tag=D8M40_07350;product=50S ribosomal protein L21;protein_id=RUP88531.1;transl_table=11 RBME01000008.1 Genbank gene 84602 88153 . - . ID=gene-D8M40_07355;Name=D8M40_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07355 RBME01000008.1 Protein Homology CDS 84602 88153 . - 0 ID=cds-RUP88532.1;Parent=gene-D8M40_07355;Dbxref=NCBI_GP:RUP88532.1;Name=RUP88532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018016584.1;locus_tag=D8M40_07355;product=Rne/Rng family ribonuclease;protein_id=RUP88532.1;transl_table=11 RBME01000008.1 Genbank gene 88556 89239 . + . ID=gene-D8M40_07360;Name=D8M40_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07360 RBME01000008.1 GeneMarkS+ CDS 88556 89239 . + 0 ID=cds-RUP88533.1;Parent=gene-D8M40_07360;Dbxref=NCBI_GP:RUP88533.1;Name=RUP88533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07360;product=hypothetical protein;protein_id=RUP88533.1;transl_table=11 RBME01000008.1 Genbank gene 89564 89974 . - . ID=gene-D8M40_07365;Name=D8M40_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07365 RBME01000008.1 Protein Homology CDS 89564 89974 . - 0 ID=cds-RUP88534.1;Parent=gene-D8M40_07365;Dbxref=NCBI_GP:RUP88534.1;Name=RUP88534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859294.1;locus_tag=D8M40_07365;product=nucleoside-diphosphate kinase;protein_id=RUP88534.1;transl_table=11 RBME01000008.1 Genbank gene 90044 90544 . - . ID=gene-D8M40_07370;Name=D8M40_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07370 RBME01000008.1 Protein Homology CDS 90044 90544 . - 0 ID=cds-RUP88535.1;Parent=gene-D8M40_07370;Dbxref=NCBI_GP:RUP88535.1;Name=RUP88535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120944.1;locus_tag=D8M40_07370;product=DUF4233 domain-containing protein;protein_id=RUP88535.1;transl_table=11 RBME01000008.1 Genbank gene 90541 92103 . - . ID=gene-D8M40_07375;Name=D8M40_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07375 RBME01000008.1 Protein Homology CDS 90541 92103 . - 0 ID=cds-RUP88536.1;Parent=gene-D8M40_07375;Dbxref=NCBI_GP:RUP88536.1;Name=RUP88536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120943.1;locus_tag=D8M40_07375;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=RUP88536.1;transl_table=11 RBME01000008.1 Genbank gene 92103 94862 . - . ID=gene-D8M40_07380;Name=D8M40_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07380 RBME01000008.1 Protein Homology CDS 92103 94862 . - 0 ID=cds-RUP88537.1;Parent=gene-D8M40_07380;Dbxref=NCBI_GP:RUP88537.1;Name=RUP88537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120942.1;locus_tag=D8M40_07380;product=valine--tRNA ligase;protein_id=RUP88537.1;transl_table=11 RBME01000008.1 Genbank gene 95000 95830 . + . ID=gene-D8M40_07385;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=D8M40_07385 RBME01000008.1 Protein Homology CDS 95000 95830 . + 0 ID=cds-RUP88538.1;Parent=gene-D8M40_07385;Dbxref=NCBI_GP:RUP88538.1;Name=RUP88538.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120941.1;locus_tag=D8M40_07385;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=RUP88538.1;transl_table=11 RBME01000008.1 Genbank gene 95842 96708 . + . ID=gene-D8M40_07390;Name=D8M40_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07390 RBME01000008.1 Protein Homology CDS 95842 96708 . + 0 ID=cds-RUP88539.1;Parent=gene-D8M40_07390;Dbxref=NCBI_GP:RUP88539.1;Name=RUP88539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120940.1;locus_tag=D8M40_07390;product=pantoate--beta-alanine ligase;protein_id=RUP88539.1;transl_table=11 RBME01000008.1 Genbank gene 96701 97414 . + . ID=gene-D8M40_07395;Name=D8M40_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07395 RBME01000008.1 GeneMarkS+ CDS 96701 97414 . + 0 ID=cds-RUP88540.1;Parent=gene-D8M40_07395;Dbxref=NCBI_GP:RUP88540.1;Name=RUP88540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07395;product=TetR/AcrR family transcriptional regulator;protein_id=RUP88540.1;transl_table=11 RBME01000008.1 Genbank gene 97459 98793 . - . ID=gene-D8M40_07400;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=D8M40_07400 RBME01000008.1 Protein Homology CDS 97459 98793 . - 0 ID=cds-RUP88541.1;Parent=gene-D8M40_07400;Dbxref=NCBI_GP:RUP88541.1;Name=RUP88541.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367461.1;locus_tag=D8M40_07400;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=RUP88541.1;transl_table=11 RBME01000008.1 Genbank gene 98954 101329 . + . ID=gene-D8M40_07405;Name=D8M40_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07405 RBME01000008.1 GeneMarkS+ CDS 98954 101329 . + 0 ID=cds-RUP88542.1;Parent=gene-D8M40_07405;Dbxref=NCBI_GP:RUP88542.1;Name=RUP88542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07405;product=hypothetical protein;protein_id=RUP88542.1;transl_table=11 RBME01000008.1 Genbank gene 101380 102051 . - . ID=gene-D8M40_07410;Name=D8M40_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07410 RBME01000008.1 Protein Homology CDS 101380 102051 . - 0 ID=cds-RUP88543.1;Parent=gene-D8M40_07410;Dbxref=NCBI_GP:RUP88543.1;Name=RUP88543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120936.1;locus_tag=D8M40_07410;product=DNA-binding response regulator;protein_id=RUP88543.1;transl_table=11 RBME01000008.1 Genbank gene 102509 103138 . - . ID=gene-D8M40_07415;Name=D8M40_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07415 RBME01000008.1 Protein Homology CDS 102509 103138 . - 0 ID=cds-RUP88544.1;Parent=gene-D8M40_07415;Dbxref=NCBI_GP:RUP88544.1;Name=RUP88544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120935.1;locus_tag=D8M40_07415;product=ATP-dependent Clp protease proteolytic subunit;protein_id=RUP88544.1;transl_table=11 RBME01000008.1 Genbank gene 103177 103779 . - . ID=gene-D8M40_07420;Name=D8M40_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07420 RBME01000008.1 Protein Homology CDS 103177 103779 . - 0 ID=cds-RUP88545.1;Parent=gene-D8M40_07420;Dbxref=NCBI_GP:RUP88545.1;Name=RUP88545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821938.1;locus_tag=D8M40_07420;product=ATP-dependent Clp protease proteolytic subunit;protein_id=RUP88545.1;transl_table=11 RBME01000008.1 Genbank gene 104026 105411 . - . ID=gene-D8M40_07425;Name=D8M40_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07425 RBME01000008.1 Protein Homology CDS 104026 105411 . - 0 ID=cds-RUP88546.1;Parent=gene-D8M40_07425;Dbxref=NCBI_GP:RUP88546.1;Name=RUP88546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120932.1;locus_tag=D8M40_07425;product=trigger factor;protein_id=RUP88546.1;transl_table=11 RBME01000008.1 Genbank gene 105501 105577 . - . ID=gene-D8M40_07430;Name=D8M40_07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07430 RBME01000008.1 tRNAscan-SE tRNA 105501 105577 . - . ID=rna-D8M40_07430;Parent=gene-D8M40_07430;anticodon=(pos:complement(105541..105543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07430;product=tRNA-Pro RBME01000008.1 tRNAscan-SE exon 105501 105577 . - . ID=exon-D8M40_07430-1;Parent=rna-D8M40_07430;anticodon=(pos:complement(105541..105543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07430;product=tRNA-Pro RBME01000008.1 Genbank gene 105728 108082 . + . ID=gene-D8M40_07435;Name=D8M40_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07435 RBME01000008.1 Protein Homology CDS 105728 108082 . + 0 ID=cds-RUP88547.1;Parent=gene-D8M40_07435;Dbxref=NCBI_GP:RUP88547.1;Name=RUP88547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120931.1;locus_tag=D8M40_07435;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=RUP88547.1;transl_table=11 RBME01000008.1 Genbank gene 108109 109854 . - . ID=gene-D8M40_07440;Name=D8M40_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07440 RBME01000008.1 Protein Homology CDS 108109 109854 . - 0 ID=cds-RUP88548.1;Parent=gene-D8M40_07440;Dbxref=NCBI_GP:RUP88548.1;Name=RUP88548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120930.1;locus_tag=D8M40_07440;product=pyruvate oxidase;protein_id=RUP88548.1;transl_table=11 RBME01000008.1 Genbank gene 110033 110107 . - . ID=gene-D8M40_07445;Name=D8M40_07445;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M40_07445 RBME01000008.1 tRNAscan-SE tRNA 110033 110107 . - . ID=rna-D8M40_07445;Parent=gene-D8M40_07445;anticodon=(pos:complement(110072..110074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07445;product=tRNA-Gly RBME01000008.1 tRNAscan-SE exon 110033 110107 . - . ID=exon-D8M40_07445-1;Parent=rna-D8M40_07445;anticodon=(pos:complement(110072..110074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M40_07445;product=tRNA-Gly RBME01000008.1 Genbank gene 110277 111101 . + . ID=gene-D8M40_07450;Name=D8M40_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07450 RBME01000008.1 Protein Homology CDS 110277 111101 . + 0 ID=cds-RUP88549.1;Parent=gene-D8M40_07450;Dbxref=NCBI_GP:RUP88549.1;Name=RUP88549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401649.1;locus_tag=D8M40_07450;product=DUF1542 domain-containing protein;protein_id=RUP88549.1;transl_table=11 RBME01000008.1 Genbank gene 111173 111263 . - . ID=gene-D8M40_07455;Name=D8M40_07455;end_range=111263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07455;partial=true RBME01000008.1 Protein Homology CDS 111173 111263 . - 1 ID=cds-RUP88550.1;Parent=gene-D8M40_07455;Dbxref=NCBI_GP:RUP88550.1;Name=RUP88550.1;end_range=111263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M40_07455;partial=true;product=hypothetical protein;protein_id=RUP88550.1;transl_table=11 ##sequence-region RBME01000090.1 1 970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000090.1 Genbank region 1 970 . + . ID=RBME01000090.1:1..970;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000090.1 Genbank gene 1 234 . - . ID=gene-D8M40_11820;Name=D8M40_11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11820;partial=true;start_range=.,1 RBME01000090.1 Protein Homology CDS 1 234 . - 0 ID=cds-RUP85409.1;Parent=gene-D8M40_11820;Dbxref=NCBI_GP:RUP85409.1;Name=RUP85409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010566626.1;locus_tag=D8M40_11820;partial=true;product=AMP-dependent synthetase;protein_id=RUP85409.1;start_range=.,1;transl_table=11 RBME01000090.1 Genbank gene 494 970 . + . ID=gene-D8M40_11825;Name=D8M40_11825;end_range=970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11825;partial=true RBME01000090.1 Protein Homology CDS 494 970 . + 0 ID=cds-RUP85410.1;Parent=gene-D8M40_11825;Dbxref=NCBI_GP:RUP85410.1;Name=RUP85410.1;end_range=970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005787405.1;locus_tag=D8M40_11825;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP85410.1;transl_table=11 ##sequence-region RBME01000091.1 1 968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000091.1 Genbank region 1 968 . + . ID=RBME01000091.1:1..968;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000091.1 Genbank gene 50 382 . + . ID=gene-D8M40_11830;Name=D8M40_11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11830 RBME01000091.1 Protein Homology CDS 50 382 . + 0 ID=cds-RUP85405.1;Parent=gene-D8M40_11830;Dbxref=NCBI_GP:RUP85405.1;Name=RUP85405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005783674.1;locus_tag=D8M40_11830;product=hypothetical protein;protein_id=RUP85405.1;transl_table=11 RBME01000091.1 Genbank gene 465 779 . + . ID=gene-D8M40_11835;Name=D8M40_11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11835 RBME01000091.1 Protein Homology CDS 465 779 . + 0 ID=cds-RUP85406.1;Parent=gene-D8M40_11835;Dbxref=NCBI_GP:RUP85406.1;Name=RUP85406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011058563.1;locus_tag=D8M40_11835;product=R body protein RebB-like protein;protein_id=RUP85406.1;transl_table=11 RBME01000091.1 Genbank gene 830 968 . + . ID=gene-D8M40_11840;Name=D8M40_11840;end_range=968,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11840;partial=true RBME01000091.1 Protein Homology CDS 830 968 . + 0 ID=cds-RUP85407.1;Parent=gene-D8M40_11840;Dbxref=NCBI_GP:RUP85407.1;Name=RUP85407.1;end_range=968,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011058564.1;locus_tag=D8M40_11840;partial=true;product=R body protein RebB-like protein;protein_id=RUP85407.1;transl_table=11 ##sequence-region RBME01000092.1 1 964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000092.1 Genbank region 1 964 . + . ID=RBME01000092.1:1..964;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000092.1 Genbank gene 1 314 . + . ID=gene-D8M40_11845;Name=D8M40_11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11845;partial=true;start_range=.,1 RBME01000092.1 Protein Homology CDS 1 314 . + 2 ID=cds-RUP85401.1;Parent=gene-D8M40_11845;Dbxref=NCBI_GP:RUP85401.1;Name=RUP85401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001007035.1;locus_tag=D8M40_11845;partial=true;product=ABC transporter permease subunit;protein_id=RUP85401.1;start_range=.,1;transl_table=11 RBME01000092.1 Genbank gene 311 964 . + . ID=gene-D8M40_11850;Name=D8M40_11850;end_range=964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11850;partial=true RBME01000092.1 Protein Homology CDS 311 964 . + 0 ID=cds-RUP85402.1;Parent=gene-D8M40_11850;Dbxref=NCBI_GP:RUP85402.1;Name=RUP85402.1;end_range=964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017491583.1;locus_tag=D8M40_11850;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=RUP85402.1;transl_table=11 ##sequence-region RBME01000093.1 1 959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000093.1 Genbank region 1 959 . + . ID=RBME01000093.1:1..959;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000093.1 Genbank gene 1 220 . + . ID=gene-D8M40_11855;Name=D8M40_11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11855;partial=true;start_range=.,1 RBME01000093.1 Protein Homology CDS 1 220 . + 1 ID=cds-RUP85397.1;Parent=gene-D8M40_11855;Dbxref=NCBI_GP:RUP85397.1;Name=RUP85397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017848873.1;locus_tag=D8M40_11855;partial=true;product=HAD family phosphatase;protein_id=RUP85397.1;start_range=.,1;transl_table=11 RBME01000093.1 Genbank gene 217 959 . - . ID=gene-D8M40_11860;Name=D8M40_11860;end_range=959,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11860;partial=true RBME01000093.1 Protein Homology CDS 217 959 . - 2 ID=cds-RUP85398.1;Parent=gene-D8M40_11860;Dbxref=NCBI_GP:RUP85398.1;Name=RUP85398.1;end_range=959,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003172628.1;locus_tag=D8M40_11860;partial=true;product=LysR family transcriptional regulator;protein_id=RUP85398.1;transl_table=11 ##sequence-region RBME01000094.1 1 955 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000094.1 Genbank region 1 955 . + . ID=RBME01000094.1:1..955;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000094.1 Genbank gene 1 193 . + . ID=gene-D8M40_11865;Name=D8M40_11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11865;partial=true;start_range=.,1 RBME01000094.1 Protein Homology CDS 1 193 . + 1 ID=cds-RUP85393.1;Parent=gene-D8M40_11865;Dbxref=NCBI_GP:RUP85393.1;Name=RUP85393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003188807.1;locus_tag=D8M40_11865;partial=true;product=hypothetical protein;protein_id=RUP85393.1;start_range=.,1;transl_table=11 RBME01000094.1 Genbank gene 249 955 . - . ID=gene-D8M40_11870;Name=D8M40_11870;end_range=955,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11870;partial=true RBME01000094.1 Protein Homology CDS 249 955 . - 2 ID=cds-RUP85394.1;Parent=gene-D8M40_11870;Dbxref=NCBI_GP:RUP85394.1;Name=RUP85394.1;end_range=955,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016986999.1;locus_tag=D8M40_11870;partial=true;product=amino acid dehydrogenase;protein_id=RUP85394.1;transl_table=11 ##sequence-region RBME01000095.1 1 954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000095.1 Genbank region 1 954 . + . ID=RBME01000095.1:1..954;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000095.1 Genbank gene 1 954 . - . ID=gene-D8M40_11875;Name=D8M40_11875;end_range=954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11875;partial=true;start_range=.,1 RBME01000095.1 Protein Homology CDS 1 954 . - 0 ID=cds-RUP85389.1;Parent=gene-D8M40_11875;Dbxref=NCBI_GP:RUP85389.1;Name=RUP85389.1;end_range=954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020301972.1;locus_tag=D8M40_11875;partial=true;product=phosphoesterase;protein_id=RUP85389.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000096.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000096.1 Genbank region 1 947 . + . ID=RBME01000096.1:1..947;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000096.1 Genbank gene 1 575 . + . ID=gene-D8M40_11880;Name=D8M40_11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11880;partial=true;start_range=.,1 RBME01000096.1 Protein Homology CDS 1 575 . + 2 ID=cds-RUP85384.1;Parent=gene-D8M40_11880;Dbxref=NCBI_GP:RUP85384.1;Name=RUP85384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017737117.1;locus_tag=D8M40_11880;partial=true;product=energy transducer TonB;protein_id=RUP85384.1;start_range=.,1;transl_table=11 RBME01000096.1 Genbank gene 568 947 . + . ID=gene-D8M40_11885;Name=rimI;end_range=947,.;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D8M40_11885;partial=true RBME01000096.1 Protein Homology CDS 568 947 . + 0 ID=cds-RUP85385.1;Parent=gene-D8M40_11885;Dbxref=NCBI_GP:RUP85385.1;Name=RUP85385.1;end_range=947,.;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233953.1;locus_tag=D8M40_11885;partial=true;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=RUP85385.1;transl_table=11 ##sequence-region RBME01000097.1 1 940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000097.1 Genbank region 1 940 . + . ID=RBME01000097.1:1..940;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000097.1 Genbank gene 1 696 . - . ID=gene-D8M40_11890;Name=D8M40_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11890;partial=true;start_range=.,1 RBME01000097.1 Protein Homology CDS 1 696 . - 0 ID=cds-RUP85381.1;Parent=gene-D8M40_11890;Dbxref=NCBI_GP:RUP85381.1;Name=RUP85381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009682817.1;locus_tag=D8M40_11890;partial=true;product=glutathione synthase;protein_id=RUP85381.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000098.1 1 938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000098.1 Genbank region 1 938 . + . ID=RBME01000098.1:1..938;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000098.1 Genbank gene 1 179 . + . ID=gene-D8M40_11895;Name=D8M40_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11895;partial=true;start_range=.,1 RBME01000098.1 Protein Homology CDS 1 179 . + 2 ID=cds-RUP85378.1;Parent=gene-D8M40_11895;Dbxref=NCBI_GP:RUP85378.1;Name=RUP85378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553995.1;locus_tag=D8M40_11895;partial=true;product=outer membrane lipoprotein carrier protein LolA;protein_id=RUP85378.1;start_range=.,1;transl_table=11 RBME01000098.1 Genbank gene 207 938 . + . ID=gene-D8M40_11900;Name=D8M40_11900;end_range=938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11900;partial=true RBME01000098.1 Protein Homology CDS 207 938 . + 0 ID=cds-RUP85379.1;Parent=gene-D8M40_11900;Dbxref=NCBI_GP:RUP85379.1;Name=RUP85379.1;end_range=938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013973284.1;locus_tag=D8M40_11900;partial=true;product=AAA family ATPase;protein_id=RUP85379.1;transl_table=11 ##sequence-region RBME01000099.1 1 937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000099.1 Genbank region 1 937 . + . ID=RBME01000099.1:1..937;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000099.1 Genbank gene 1 937 . - . ID=gene-D8M40_11905;Name=D8M40_11905;end_range=937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_11905;partial=true;start_range=.,1 RBME01000099.1 Protein Homology CDS 1 937 . - 2 ID=cds-RUP85374.1;Parent=gene-D8M40_11905;Dbxref=NCBI_GP:RUP85374.1;Name=RUP85374.1;end_range=937,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046722256.1;locus_tag=D8M40_11905;partial=true;product=non-ribosomal peptide synthetase;protein_id=RUP85374.1;start_range=.,1;transl_table=11 ##sequence-region RBME01000009.1 1 106477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=43769 RBME01000009.1 Genbank region 1 106477 . + . ID=RBME01000009.1:1..106477;Dbxref=taxon:43769;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID18036 RBME01000009.1 Genbank gene 177 3632 . - . ID=gene-D8M40_07460;Name=D8M40_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07460 RBME01000009.1 Protein Homology CDS 177 3632 . - 0 ID=cds-RUP88299.1;Parent=gene-D8M40_07460;Dbxref=NCBI_GP:RUP88299.1;Name=RUP88299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120731.1;locus_tag=D8M40_07460;product=aldehyde dehydrogenase family protein;protein_id=RUP88299.1;transl_table=11 RBME01000009.1 Genbank gene 4043 5905 . + . ID=gene-D8M40_07465;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=D8M40_07465 RBME01000009.1 Protein Homology CDS 4043 5905 . + 0 ID=cds-RUP88300.1;Parent=gene-D8M40_07465;Dbxref=NCBI_GP:RUP88300.1;Name=RUP88300.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279388.1;locus_tag=D8M40_07465;product=molecular chaperone DnaK;protein_id=RUP88300.1;transl_table=11 RBME01000009.1 Genbank gene 5906 6694 . + . ID=gene-D8M40_07470;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=D8M40_07470 RBME01000009.1 Protein Homology CDS 5906 6694 . + 0 ID=cds-RUP88301.1;Parent=gene-D8M40_07470;Dbxref=NCBI_GP:RUP88301.1;Name=RUP88301.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120733.1;locus_tag=D8M40_07470;product=nucleotide exchange factor GrpE;protein_id=RUP88301.1;transl_table=11 RBME01000009.1 Genbank gene 6720 7910 . + . ID=gene-D8M40_07475;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D8M40_07475 RBME01000009.1 Protein Homology CDS 6720 7910 . + 0 ID=cds-RUP88302.1;Parent=gene-D8M40_07475;Dbxref=NCBI_GP:RUP88302.1;Name=RUP88302.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120734.1;locus_tag=D8M40_07475;product=molecular chaperone DnaJ;protein_id=RUP88302.1;transl_table=11 RBME01000009.1 Genbank gene 7941 8402 . + . ID=gene-D8M40_07480;Name=D8M40_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07480 RBME01000009.1 Protein Homology CDS 7941 8402 . + 0 ID=cds-RUP88303.1;Parent=gene-D8M40_07480;Dbxref=NCBI_GP:RUP88303.1;Name=RUP88303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120735.1;locus_tag=D8M40_07480;product=MerR family transcriptional regulator;protein_id=RUP88303.1;transl_table=11 RBME01000009.1 Genbank gene 8647 10161 . + . ID=gene-D8M40_07485;Name=D8M40_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07485 RBME01000009.1 Protein Homology CDS 8647 10161 . + 0 ID=cds-RUP88304.1;Parent=gene-D8M40_07485;Dbxref=NCBI_GP:RUP88304.1;Name=RUP88304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329341.1;locus_tag=D8M40_07485;product=aldehyde dehydrogenase;protein_id=RUP88304.1;transl_table=11 RBME01000009.1 Genbank gene 10168 11421 . - . ID=gene-D8M40_07490;Name=D8M40_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07490 RBME01000009.1 Protein Homology CDS 10168 11421 . - 0 ID=cds-RUP88305.1;Parent=gene-D8M40_07490;Dbxref=NCBI_GP:RUP88305.1;Name=RUP88305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06259.10;locus_tag=D8M40_07490;product=hypothetical protein;protein_id=RUP88305.1;transl_table=11 RBME01000009.1 Genbank gene 11424 11744 . - . ID=gene-D8M40_07495;Name=D8M40_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07495 RBME01000009.1 GeneMarkS+ CDS 11424 11744 . - 0 ID=cds-RUP88306.1;Parent=gene-D8M40_07495;Dbxref=NCBI_GP:RUP88306.1;Name=RUP88306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07495;product=hypothetical protein;protein_id=RUP88306.1;transl_table=11 RBME01000009.1 Genbank gene 11857 12684 . + . ID=gene-D8M40_07500;Name=D8M40_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07500 RBME01000009.1 Protein Homology CDS 11857 12684 . + 0 ID=cds-RUP88307.1;Parent=gene-D8M40_07500;Dbxref=NCBI_GP:RUP88307.1;Name=RUP88307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120739.1;locus_tag=D8M40_07500;product=amidohydrolase;protein_id=RUP88307.1;transl_table=11 RBME01000009.1 Genbank gene 12679 13323 . - . ID=gene-D8M40_07505;Name=D8M40_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07505 RBME01000009.1 Protein Homology CDS 12679 13323 . - 0 ID=cds-RUP88308.1;Parent=gene-D8M40_07505;Dbxref=NCBI_GP:RUP88308.1;Name=RUP88308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863455.1;locus_tag=D8M40_07505;product=ATP-binding cassette domain-containing protein;protein_id=RUP88308.1;transl_table=11 RBME01000009.1 Genbank gene 13392 15431 . - . ID=gene-D8M40_07510;Name=D8M40_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07510 RBME01000009.1 GeneMarkS+ CDS 13392 15431 . - 0 ID=cds-RUP88309.1;Parent=gene-D8M40_07510;Dbxref=NCBI_GP:RUP88309.1;Name=RUP88309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07510;product=hypothetical protein;protein_id=RUP88309.1;transl_table=11 RBME01000009.1 Genbank gene 15495 16721 . - . ID=gene-D8M40_07515;Name=D8M40_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07515 RBME01000009.1 GeneMarkS+ CDS 15495 16721 . - 0 ID=cds-RUP88310.1;Parent=gene-D8M40_07515;Dbxref=NCBI_GP:RUP88310.1;Name=RUP88310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07515;product=hypothetical protein;protein_id=RUP88310.1;transl_table=11 RBME01000009.1 Genbank gene 16964 18361 . + . ID=gene-D8M40_07520;Name=D8M40_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07520 RBME01000009.1 Protein Homology CDS 16964 18361 . + 0 ID=cds-RUP88311.1;Parent=gene-D8M40_07520;Dbxref=NCBI_GP:RUP88311.1;Name=RUP88311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188682.1;locus_tag=D8M40_07520;product=sodium:glutamate symporter;protein_id=RUP88311.1;transl_table=11 RBME01000009.1 Genbank gene 18532 21090 . + . ID=gene-D8M40_07525;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=D8M40_07525 RBME01000009.1 Protein Homology CDS 18532 21090 . + 0 ID=cds-RUP88312.1;Parent=gene-D8M40_07525;Dbxref=NCBI_GP:RUP88312.1;Name=RUP88312.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120744.1;locus_tag=D8M40_07525;product=ATP-dependent chaperone ClpB;protein_id=RUP88312.1;transl_table=11 RBME01000009.1 Genbank gene 21170 21958 . + . ID=gene-D8M40_07530;Name=D8M40_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07530 RBME01000009.1 Protein Homology CDS 21170 21958 . + 0 ID=cds-RUP88313.1;Parent=gene-D8M40_07530;Dbxref=NCBI_GP:RUP88313.1;Name=RUP88313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120745.1;locus_tag=D8M40_07530;product=putative hydro-lyase;protein_id=RUP88313.1;transl_table=11 RBME01000009.1 Genbank gene 22166 22996 . + . ID=gene-D8M40_07535;Name=D8M40_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07535 RBME01000009.1 Protein Homology CDS 22166 22996 . + 0 ID=cds-RUP88314.1;Parent=gene-D8M40_07535;Dbxref=NCBI_GP:RUP88314.1;Name=RUP88314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120747.1;locus_tag=D8M40_07535;product=sulfurtransferase;protein_id=RUP88314.1;transl_table=11 RBME01000009.1 Genbank gene 23675 24559 . + . ID=gene-D8M40_07540;Name=D8M40_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07540 RBME01000009.1 Protein Homology CDS 23675 24559 . + 0 ID=cds-RUP88374.1;Parent=gene-D8M40_07540;Dbxref=NCBI_GP:RUP88374.1;Name=RUP88374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529757.1;locus_tag=D8M40_07540;product=hypothetical protein;protein_id=RUP88374.1;transl_table=11 RBME01000009.1 Genbank gene 24552 25094 . + . ID=gene-D8M40_07545;Name=D8M40_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07545 RBME01000009.1 Protein Homology CDS 24552 25094 . + 0 ID=cds-RUP88315.1;Parent=gene-D8M40_07545;Dbxref=NCBI_GP:RUP88315.1;Name=RUP88315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011272936.1;locus_tag=D8M40_07545;product=orotate phosphoribosyltransferase;protein_id=RUP88315.1;transl_table=11 RBME01000009.1 Genbank gene 25094 25783 . + . ID=gene-D8M40_07550;Name=D8M40_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07550 RBME01000009.1 Protein Homology CDS 25094 25783 . + 0 ID=cds-RUP88316.1;Parent=gene-D8M40_07550;Dbxref=NCBI_GP:RUP88316.1;Name=RUP88316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401926.1;locus_tag=D8M40_07550;product=RNA methyltransferase;protein_id=RUP88316.1;transl_table=11 RBME01000009.1 Genbank gene 25922 27127 . + . ID=gene-D8M40_07555;Name=D8M40_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07555 RBME01000009.1 Protein Homology CDS 25922 27127 . + 0 ID=cds-RUP88317.1;Parent=gene-D8M40_07555;Dbxref=NCBI_GP:RUP88317.1;Name=RUP88317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120751.1;locus_tag=D8M40_07555;product=glycoside hydrolase family 76;protein_id=RUP88317.1;transl_table=11 RBME01000009.1 Genbank gene 27186 28220 . + . ID=gene-D8M40_07560;Name=D8M40_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07560 RBME01000009.1 Protein Homology CDS 27186 28220 . + 0 ID=cds-RUP88318.1;Parent=gene-D8M40_07560;Dbxref=NCBI_GP:RUP88318.1;Name=RUP88318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601964.1;locus_tag=D8M40_07560;product=class II fructose-bisphosphate aldolase;protein_id=RUP88318.1;transl_table=11 RBME01000009.1 Genbank gene 28259 29488 . + . ID=gene-D8M40_07565;Name=D8M40_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07565 RBME01000009.1 Protein Homology CDS 28259 29488 . + 0 ID=cds-RUP88319.1;Parent=gene-D8M40_07565;Dbxref=NCBI_GP:RUP88319.1;Name=RUP88319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401923.1;locus_tag=D8M40_07565;product=FUSC family protein;protein_id=RUP88319.1;transl_table=11 RBME01000009.1 Genbank gene 29519 30472 . - . ID=gene-D8M40_07570;Name=D8M40_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07570 RBME01000009.1 Protein Homology CDS 29519 30472 . - 0 ID=cds-RUP88320.1;Parent=gene-D8M40_07570;Dbxref=NCBI_GP:RUP88320.1;Name=RUP88320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120754.1;locus_tag=D8M40_07570;product=hypothetical protein;protein_id=RUP88320.1;transl_table=11 RBME01000009.1 Genbank gene 30580 31872 . + . ID=gene-D8M40_07575;Name=D8M40_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07575 RBME01000009.1 Protein Homology CDS 30580 31872 . + 0 ID=cds-RUP88321.1;Parent=gene-D8M40_07575;Dbxref=NCBI_GP:RUP88321.1;Name=RUP88321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847779.1;locus_tag=D8M40_07575;product=adenylosuccinate synthase;protein_id=RUP88321.1;transl_table=11 RBME01000009.1 Genbank gene 31879 33396 . + . ID=gene-D8M40_07580;Name=D8M40_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07580 RBME01000009.1 Protein Homology CDS 31879 33396 . + 0 ID=cds-RUP88322.1;Parent=gene-D8M40_07580;Dbxref=NCBI_GP:RUP88322.1;Name=RUP88322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120756.1;locus_tag=D8M40_07580;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=RUP88322.1;transl_table=11 RBME01000009.1 Genbank gene 33393 35975 . - . ID=gene-D8M40_07585;Name=D8M40_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07585 RBME01000009.1 Protein Homology CDS 33393 35975 . - 0 ID=cds-RUP88323.1;Parent=gene-D8M40_07585;Dbxref=NCBI_GP:RUP88323.1;Name=RUP88323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120757.1;locus_tag=D8M40_07585;product=serine/threonine protein kinase;protein_id=RUP88323.1;transl_table=11 RBME01000009.1 Genbank gene 35972 37033 . - . ID=gene-D8M40_07590;Name=D8M40_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07590 RBME01000009.1 Protein Homology CDS 35972 37033 . - 0 ID=cds-RUP88324.1;Parent=gene-D8M40_07590;Dbxref=NCBI_GP:RUP88324.1;Name=RUP88324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401911.1;locus_tag=D8M40_07590;product=glutamate ABC transporter substrate-binding protein;protein_id=RUP88324.1;transl_table=11 RBME01000009.1 Genbank gene 37030 38544 . - . ID=gene-D8M40_07595;Name=D8M40_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07595 RBME01000009.1 Protein Homology CDS 37030 38544 . - 0 ID=cds-RUP88375.1;Parent=gene-D8M40_07595;Dbxref=NCBI_GP:RUP88375.1;Name=RUP88375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117918.1;locus_tag=D8M40_07595;product=hypothetical protein;protein_id=RUP88375.1;transl_table=11 RBME01000009.1 Genbank gene 38700 39296 . + . ID=gene-D8M40_07600;Name=D8M40_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07600 RBME01000009.1 Protein Homology CDS 38700 39296 . + 0 ID=cds-RUP88325.1;Parent=gene-D8M40_07600;Dbxref=NCBI_GP:RUP88325.1;Name=RUP88325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601943.1;locus_tag=D8M40_07600;product=NUDIX hydrolase;protein_id=RUP88325.1;transl_table=11 RBME01000009.1 Genbank gene 39322 40848 . - . ID=gene-D8M40_07605;Name=D8M40_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07605 RBME01000009.1 Protein Homology CDS 39322 40848 . - 0 ID=cds-RUP88376.1;Parent=gene-D8M40_07605;Dbxref=NCBI_GP:RUP88376.1;Name=RUP88376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847757.1;locus_tag=D8M40_07605;product=cardiolipin synthase A;protein_id=RUP88376.1;transl_table=11 RBME01000009.1 Genbank gene 40864 41688 . - . ID=gene-D8M40_07610;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=D8M40_07610 RBME01000009.1 Protein Homology CDS 40864 41688 . - 0 ID=cds-RUP88326.1;Parent=gene-D8M40_07610;Dbxref=NCBI_GP:RUP88326.1;Name=RUP88326.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004601265.1;locus_tag=D8M40_07610;product=exodeoxyribonuclease III;protein_id=RUP88326.1;transl_table=11 RBME01000009.1 Genbank gene 41724 42857 . - . ID=gene-D8M40_07615;Name=D8M40_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07615 RBME01000009.1 Protein Homology CDS 41724 42857 . - 0 ID=cds-RUP88327.1;Parent=gene-D8M40_07615;Dbxref=NCBI_GP:RUP88327.1;Name=RUP88327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120763.1;locus_tag=D8M40_07615;product=GNAT family N-acetyltransferase;protein_id=RUP88327.1;transl_table=11 RBME01000009.1 Genbank gene 42864 43481 . - . ID=gene-D8M40_07620;Name=D8M40_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07620 RBME01000009.1 Protein Homology CDS 42864 43481 . - 0 ID=cds-RUP88328.1;Parent=gene-D8M40_07620;Dbxref=NCBI_GP:RUP88328.1;Name=RUP88328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284937.1;locus_tag=D8M40_07620;product=peptide deformylase;protein_id=RUP88328.1;transl_table=11 RBME01000009.1 Genbank gene 43480 43767 . + . ID=gene-D8M40_07625;Name=D8M40_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07625 RBME01000009.1 Protein Homology CDS 43480 43767 . + 0 ID=cds-RUP88329.1;Parent=gene-D8M40_07625;Dbxref=NCBI_GP:RUP88329.1;Name=RUP88329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242673.1;locus_tag=D8M40_07625;product=DUF3263 domain-containing protein;protein_id=RUP88329.1;transl_table=11 RBME01000009.1 Genbank gene 43769 44623 . + . ID=gene-D8M40_07630;Name=D8M40_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07630 RBME01000009.1 Protein Homology CDS 43769 44623 . + 0 ID=cds-RUP88330.1;Parent=gene-D8M40_07630;Dbxref=NCBI_GP:RUP88330.1;Name=RUP88330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13399.4;locus_tag=D8M40_07630;product=LytR family transcriptional regulator;protein_id=RUP88330.1;transl_table=11 RBME01000009.1 Genbank gene 44623 45837 . + . ID=gene-D8M40_07635;Name=D8M40_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07635 RBME01000009.1 Protein Homology CDS 44623 45837 . + 0 ID=cds-RUP88331.1;Parent=gene-D8M40_07635;Dbxref=NCBI_GP:RUP88331.1;Name=RUP88331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120767.1;locus_tag=D8M40_07635;product=glutamate--cysteine ligase;protein_id=RUP88331.1;transl_table=11 RBME01000009.1 Genbank gene 45865 46143 . - . ID=gene-D8M40_07640;Name=D8M40_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07640 RBME01000009.1 GeneMarkS+ CDS 45865 46143 . - 0 ID=cds-RUP88332.1;Parent=gene-D8M40_07640;Dbxref=NCBI_GP:RUP88332.1;Name=RUP88332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07640;product=hypothetical protein;protein_id=RUP88332.1;transl_table=11 RBME01000009.1 Genbank gene 46365 46757 . - . ID=gene-D8M40_07645;Name=D8M40_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07645 RBME01000009.1 Protein Homology CDS 46365 46757 . - 0 ID=cds-RUP88333.1;Parent=gene-D8M40_07645;Dbxref=NCBI_GP:RUP88333.1;Name=RUP88333.1;Note=subunit G of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822633.1;locus_tag=D8M40_07645;product=cation:proton antiporter;protein_id=RUP88333.1;transl_table=11 RBME01000009.1 Genbank gene 46760 47035 . - . ID=gene-D8M40_07650;Name=D8M40_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07650 RBME01000009.1 Protein Homology CDS 46760 47035 . - 0 ID=cds-RUP88334.1;Parent=gene-D8M40_07650;Dbxref=NCBI_GP:RUP88334.1;Name=RUP88334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120770.1;locus_tag=D8M40_07650;product=cation:proton antiporter;protein_id=RUP88334.1;transl_table=11 RBME01000009.1 Genbank gene 47040 47549 . - . ID=gene-D8M40_07655;Name=D8M40_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07655 RBME01000009.1 Protein Homology CDS 47040 47549 . - 0 ID=cds-RUP88377.1;Parent=gene-D8M40_07655;Dbxref=NCBI_GP:RUP88377.1;Name=RUP88377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652160.1;locus_tag=D8M40_07655;product=Na+/H+ antiporter subunit E;protein_id=RUP88377.1;transl_table=11 RBME01000009.1 Genbank gene 47639 49321 . - . ID=gene-D8M40_07660;Name=D8M40_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07660 RBME01000009.1 Protein Homology CDS 47639 49321 . - 0 ID=cds-RUP88335.1;Parent=gene-D8M40_07660;Dbxref=NCBI_GP:RUP88335.1;Name=RUP88335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120772.1;locus_tag=D8M40_07660;product=Na+/H+ antiporter subunit D;protein_id=RUP88335.1;transl_table=11 RBME01000009.1 Genbank gene 49356 49862 . - . ID=gene-D8M40_07665;Name=D8M40_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07665 RBME01000009.1 Protein Homology CDS 49356 49862 . - 0 ID=cds-RUP88336.1;Parent=gene-D8M40_07665;Dbxref=NCBI_GP:RUP88336.1;Name=RUP88336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329872.1;locus_tag=D8M40_07665;product=Na(+)/H(+) antiporter subunit C;protein_id=RUP88336.1;transl_table=11 RBME01000009.1 Genbank gene 49862 52903 . - . ID=gene-D8M40_07670;Name=D8M40_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07670 RBME01000009.1 Protein Homology CDS 49862 52903 . - 0 ID=cds-RUP88337.1;Parent=gene-D8M40_07670;Dbxref=NCBI_GP:RUP88337.1;Name=RUP88337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120774.1;locus_tag=D8M40_07670;product=Na+/H+ antiporter subunit A;protein_id=RUP88337.1;transl_table=11 RBME01000009.1 Genbank gene 52954 54297 . - . ID=gene-D8M40_07675;Name=D8M40_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07675 RBME01000009.1 Protein Homology CDS 52954 54297 . - 0 ID=cds-RUP88378.1;Parent=gene-D8M40_07675;Dbxref=NCBI_GP:RUP88378.1;Name=RUP88378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117938.1;locus_tag=D8M40_07675;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP88378.1;transl_table=11 RBME01000009.1 Genbank gene 54398 55828 . - . ID=gene-D8M40_07680;Name=D8M40_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07680 RBME01000009.1 Protein Homology CDS 54398 55828 . - 0 ID=cds-RUP88338.1;Parent=gene-D8M40_07680;Dbxref=NCBI_GP:RUP88338.1;Name=RUP88338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120776.1;locus_tag=D8M40_07680;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP88338.1;transl_table=11 RBME01000009.1 Genbank gene 56065 57711 . + . ID=gene-D8M40_07685;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D8M40_07685 RBME01000009.1 Protein Homology CDS 56065 57711 . + 0 ID=cds-RUP88339.1;Parent=gene-D8M40_07685;Dbxref=NCBI_GP:RUP88339.1;Name=RUP88339.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019371.1;locus_tag=D8M40_07685;product=chaperonin GroEL;protein_id=RUP88339.1;transl_table=11 RBME01000009.1 Genbank gene 58325 58522 . + . ID=gene-D8M40_07690;Name=D8M40_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07690 RBME01000009.1 GeneMarkS+ CDS 58325 58522 . + 0 ID=cds-RUP88340.1;Parent=gene-D8M40_07690;Dbxref=NCBI_GP:RUP88340.1;Name=RUP88340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07690;product=hypothetical protein;protein_id=RUP88340.1;transl_table=11 RBME01000009.1 Genbank gene 58897 59796 . + . ID=gene-D8M40_07695;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=D8M40_07695 RBME01000009.1 Protein Homology CDS 58897 59796 . + 0 ID=cds-RUP88341.1;Parent=gene-D8M40_07695;Dbxref=NCBI_GP:RUP88341.1;Name=RUP88341.1;gbkey=CDS;gene=ppk2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117940.1;locus_tag=D8M40_07695;product=polyphosphate kinase 2;protein_id=RUP88341.1;transl_table=11 RBME01000009.1 Genbank gene 59799 60125 . - . ID=gene-D8M40_07700;Name=D8M40_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07700 RBME01000009.1 Protein Homology CDS 59799 60125 . - 0 ID=cds-RUP88342.1;Parent=gene-D8M40_07700;Dbxref=NCBI_GP:RUP88342.1;Name=RUP88342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120781.1;locus_tag=D8M40_07700;product=rhodanese-like domain-containing protein;protein_id=RUP88342.1;transl_table=11 RBME01000009.1 Genbank gene 60217 61029 . - . ID=gene-D8M40_07705;Name=D8M40_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07705 RBME01000009.1 Protein Homology CDS 60217 61029 . - 0 ID=cds-RUP88343.1;Parent=gene-D8M40_07705;Dbxref=NCBI_GP:RUP88343.1;Name=RUP88343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120782.1;locus_tag=D8M40_07705;product=hypothetical protein;protein_id=RUP88343.1;transl_table=11 RBME01000009.1 Genbank gene 61269 61745 . - . ID=gene-D8M40_07710;Name=D8M40_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07710 RBME01000009.1 Protein Homology CDS 61269 61745 . - 0 ID=cds-RUP88344.1;Parent=gene-D8M40_07710;Dbxref=NCBI_GP:RUP88344.1;Name=RUP88344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310832.1;locus_tag=D8M40_07710;product=inorganic diphosphatase;protein_id=RUP88344.1;transl_table=11 RBME01000009.1 Genbank gene 61978 63312 . + . ID=gene-D8M40_07715;Name=D8M40_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07715 RBME01000009.1 Protein Homology CDS 61978 63312 . + 0 ID=cds-RUP88345.1;Parent=gene-D8M40_07715;Dbxref=NCBI_GP:RUP88345.1;Name=RUP88345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401868.1;locus_tag=D8M40_07715;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=RUP88345.1;transl_table=11 RBME01000009.1 Genbank gene 63381 64442 . + . ID=gene-D8M40_07720;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=D8M40_07720 RBME01000009.1 Protein Homology CDS 63381 64442 . + 0 ID=cds-RUP88346.1;Parent=gene-D8M40_07720;Dbxref=NCBI_GP:RUP88346.1;Name=RUP88346.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581006.1;locus_tag=D8M40_07720;product=tRNA lysidine(34) synthetase TilS;protein_id=RUP88346.1;transl_table=11 RBME01000009.1 Genbank gene 64580 65191 . + . ID=gene-D8M40_07725;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=D8M40_07725 RBME01000009.1 Protein Homology CDS 64580 65191 . + 0 ID=cds-RUP88347.1;Parent=gene-D8M40_07725;Dbxref=NCBI_GP:RUP88347.1;Name=RUP88347.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120787.1;locus_tag=D8M40_07725;product=hypoxanthine phosphoribosyltransferase;protein_id=RUP88347.1;transl_table=11 RBME01000009.1 Genbank gene 65312 67492 . + . ID=gene-D8M40_07730;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=D8M40_07730 RBME01000009.1 Protein Homology CDS 65312 67492 . + 0 ID=cds-RUP88348.1;Parent=gene-D8M40_07730;Dbxref=NCBI_GP:RUP88348.1;Name=RUP88348.1;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120788.1;locus_tag=D8M40_07730;product=ATP-dependent zinc metalloprotease FtsH;protein_id=RUP88348.1;transl_table=11 RBME01000009.1 Genbank gene 67485 68081 . + . ID=gene-D8M40_07735;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=D8M40_07735 RBME01000009.1 Protein Homology CDS 67485 68081 . + 0 ID=cds-RUP88349.1;Parent=gene-D8M40_07735;Dbxref=NCBI_GP:RUP88349.1;Name=RUP88349.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120789.1;locus_tag=D8M40_07735;product=GTP cyclohydrolase I FolE;protein_id=RUP88349.1;transl_table=11 RBME01000009.1 Genbank gene 68202 69005 . + . ID=gene-D8M40_07740;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D8M40_07740 RBME01000009.1 Protein Homology CDS 68202 69005 . + 0 ID=cds-RUP88379.1;Parent=gene-D8M40_07740;Dbxref=NCBI_GP:RUP88379.1;Name=RUP88379.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297316.1;locus_tag=D8M40_07740;product=dihydropteroate synthase;protein_id=RUP88379.1;transl_table=11 RBME01000009.1 Genbank gene 69110 69460 . + . ID=gene-D8M40_07745;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=D8M40_07745 RBME01000009.1 Protein Homology CDS 69110 69460 . + 0 ID=cds-RUP88350.1;Parent=gene-D8M40_07745;Dbxref=NCBI_GP:RUP88350.1;Name=RUP88350.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120791.1;locus_tag=D8M40_07745;product=dihydroneopterin aldolase;protein_id=RUP88350.1;transl_table=11 RBME01000009.1 Genbank gene 69457 69963 . + . ID=gene-D8M40_07750;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=D8M40_07750 RBME01000009.1 Protein Homology CDS 69457 69963 . + 0 ID=cds-RUP88351.1;Parent=gene-D8M40_07750;Dbxref=NCBI_GP:RUP88351.1;Name=RUP88351.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120792.1;locus_tag=D8M40_07750;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=RUP88351.1;transl_table=11 RBME01000009.1 Genbank gene 69971 70432 . + . ID=gene-D8M40_07755;Name=D8M40_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07755 RBME01000009.1 Protein Homology CDS 69971 70432 . + 0 ID=cds-RUP88352.1;Parent=gene-D8M40_07755;Dbxref=NCBI_GP:RUP88352.1;Name=RUP88352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120793.1;locus_tag=D8M40_07755;product=DUF3180 domain-containing protein;protein_id=RUP88352.1;transl_table=11 RBME01000009.1 Genbank gene 70447 71760 . + . ID=gene-D8M40_07760;Name=D8M40_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07760 RBME01000009.1 GeneMarkS+ CDS 70447 71760 . + 0 ID=cds-RUP88353.1;Parent=gene-D8M40_07760;Dbxref=NCBI_GP:RUP88353.1;Name=RUP88353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07760;product=hypothetical protein;protein_id=RUP88353.1;transl_table=11 RBME01000009.1 Genbank gene 72186 72809 . + . ID=gene-D8M40_07765;Name=D8M40_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07765 RBME01000009.1 Protein Homology CDS 72186 72809 . + 0 ID=cds-RUP88380.1;Parent=gene-D8M40_07765;Dbxref=NCBI_GP:RUP88380.1;Name=RUP88380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401857.1;locus_tag=D8M40_07765;product=pantoate--beta-alanine ligase;protein_id=RUP88380.1;transl_table=11 RBME01000009.1 Genbank gene 72814 73743 . - . ID=gene-D8M40_07770;Name=D8M40_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07770 RBME01000009.1 Protein Homology CDS 72814 73743 . - 0 ID=cds-RUP88381.1;Parent=gene-D8M40_07770;Dbxref=NCBI_GP:RUP88381.1;Name=RUP88381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529464.1;locus_tag=D8M40_07770;product=ArsA family ATPase;protein_id=RUP88381.1;transl_table=11 RBME01000009.1 Genbank gene 73803 74066 . - . ID=gene-D8M40_07775;Name=D8M40_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07775 RBME01000009.1 Protein Homology CDS 73803 74066 . - 0 ID=cds-RUP88354.1;Parent=gene-D8M40_07775;Dbxref=NCBI_GP:RUP88354.1;Name=RUP88354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120797.1;locus_tag=D8M40_07775;product=DNA helicase;protein_id=RUP88354.1;transl_table=11 RBME01000009.1 Genbank gene 74087 75808 . - . ID=gene-D8M40_07780;Name=D8M40_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07780 RBME01000009.1 Protein Homology CDS 74087 75808 . - 0 ID=cds-RUP88355.1;Parent=gene-D8M40_07780;Dbxref=NCBI_GP:RUP88355.1;Name=RUP88355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120798.1;locus_tag=D8M40_07780;product=carbon starvation protein A;protein_id=RUP88355.1;transl_table=11 RBME01000009.1 Genbank gene 76022 77632 . + . ID=gene-D8M40_07785;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=D8M40_07785 RBME01000009.1 Protein Homology CDS 76022 77632 . + 0 ID=cds-RUP88382.1;Parent=gene-D8M40_07785;Dbxref=NCBI_GP:RUP88382.1;Name=RUP88382.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188841.1;locus_tag=D8M40_07785;product=lysine--tRNA ligase;protein_id=RUP88382.1;transl_table=11 RBME01000009.1 Genbank gene 77641 79068 . + . ID=gene-D8M40_07790;Name=D8M40_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07790 RBME01000009.1 Protein Homology CDS 77641 79068 . + 0 ID=cds-RUP88356.1;Parent=gene-D8M40_07790;Dbxref=NCBI_GP:RUP88356.1;Name=RUP88356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120800.1;locus_tag=D8M40_07790;product=DHA2 family efflux MFS transporter permease subunit;protein_id=RUP88356.1;transl_table=11 RBME01000009.1 Genbank gene 79106 80587 . + . ID=gene-D8M40_07795;Name=D8M40_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07795 RBME01000009.1 Protein Homology CDS 79106 80587 . + 0 ID=cds-RUP88357.1;Parent=gene-D8M40_07795;Dbxref=NCBI_GP:RUP88357.1;Name=RUP88357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120801.1;locus_tag=D8M40_07795;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=RUP88357.1;transl_table=11 RBME01000009.1 Genbank gene 81012 83261 . + . ID=gene-D8M40_07800;Name=D8M40_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07800 RBME01000009.1 Protein Homology CDS 81012 83261 . + 0 ID=cds-RUP88358.1;Parent=gene-D8M40_07800;Dbxref=NCBI_GP:RUP88358.1;Name=RUP88358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120802.1;locus_tag=D8M40_07800;product=YhgE/Pip domain-containing protein;protein_id=RUP88358.1;transl_table=11 RBME01000009.1 Genbank gene 83532 86417 . + . ID=gene-D8M40_07805;Name=D8M40_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07805 RBME01000009.1 Protein Homology CDS 83532 86417 . + 0 ID=cds-RUP88359.1;Parent=gene-D8M40_07805;Dbxref=NCBI_GP:RUP88359.1;Name=RUP88359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120803.1;locus_tag=D8M40_07805;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=RUP88359.1;transl_table=11 RBME01000009.1 Genbank gene 86674 87957 . - . ID=gene-D8M40_07810;Name=D8M40_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07810 RBME01000009.1 Protein Homology CDS 86674 87957 . - 0 ID=cds-RUP88383.1;Parent=gene-D8M40_07810;Dbxref=NCBI_GP:RUP88383.1;Name=RUP88383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120804.1;locus_tag=D8M40_07810;product=lipase;protein_id=RUP88383.1;transl_table=11 RBME01000009.1 Genbank gene 88362 89231 . - . ID=gene-D8M40_07815;Name=D8M40_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07815 RBME01000009.1 Protein Homology CDS 88362 89231 . - 0 ID=cds-RUP88384.1;Parent=gene-D8M40_07815;Dbxref=NCBI_GP:RUP88384.1;Name=RUP88384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284775.1;locus_tag=D8M40_07815;product=A/G-specific adenine glycosylase;protein_id=RUP88384.1;transl_table=11 RBME01000009.1 Genbank gene 89321 89938 . + . ID=gene-D8M40_07820;Name=D8M40_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07820 RBME01000009.1 Protein Homology CDS 89321 89938 . + 0 ID=cds-RUP88360.1;Parent=gene-D8M40_07820;Dbxref=NCBI_GP:RUP88360.1;Name=RUP88360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401837.1;locus_tag=D8M40_07820;product=carbonic anhydrase;protein_id=RUP88360.1;transl_table=11 RBME01000009.1 Genbank gene 90153 90908 . + . ID=gene-D8M40_07825;Name=D8M40_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07825 RBME01000009.1 GeneMarkS+ CDS 90153 90908 . + 0 ID=cds-RUP88361.1;Parent=gene-D8M40_07825;Dbxref=NCBI_GP:RUP88361.1;Name=RUP88361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M40_07825;product=hypothetical protein;protein_id=RUP88361.1;transl_table=11 RBME01000009.1 Genbank gene 90943 92496 . - . ID=gene-D8M40_07830;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=D8M40_07830 RBME01000009.1 Protein Homology CDS 90943 92496 . - 0 ID=cds-RUP88362.1;Parent=gene-D8M40_07830;Dbxref=NCBI_GP:RUP88362.1;Name=RUP88362.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121603.1;locus_tag=D8M40_07830;product=DNA repair protein RadA;protein_id=RUP88362.1;transl_table=11 RBME01000009.1 Genbank gene 92670 93329 . - . ID=gene-D8M40_07835;Name=D8M40_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07835 RBME01000009.1 Protein Homology CDS 92670 93329 . - 0 ID=cds-RUP88363.1;Parent=gene-D8M40_07835;Dbxref=NCBI_GP:RUP88363.1;Name=RUP88363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121602.1;locus_tag=D8M40_07835;product=hypothetical protein;protein_id=RUP88363.1;transl_table=11 RBME01000009.1 Genbank gene 93569 94153 . + . ID=gene-D8M40_07840;Name=D8M40_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07840 RBME01000009.1 Protein Homology CDS 93569 94153 . + 0 ID=cds-RUP88364.1;Parent=gene-D8M40_07840;Dbxref=NCBI_GP:RUP88364.1;Name=RUP88364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188874.1;locus_tag=D8M40_07840;product=CarD family transcriptional regulator;protein_id=RUP88364.1;transl_table=11 RBME01000009.1 Genbank gene 94188 95615 . + . ID=gene-D8M40_07845;Name=D8M40_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07845 RBME01000009.1 Protein Homology CDS 94188 95615 . + 0 ID=cds-RUP88365.1;Parent=gene-D8M40_07845;Dbxref=NCBI_GP:RUP88365.1;Name=RUP88365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007469771.1;locus_tag=D8M40_07845;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=RUP88365.1;transl_table=11 RBME01000009.1 Genbank gene 95646 97163 . + . ID=gene-D8M40_07850;Name=D8M40_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07850 RBME01000009.1 Protein Homology CDS 95646 97163 . + 0 ID=cds-RUP88366.1;Parent=gene-D8M40_07850;Dbxref=NCBI_GP:RUP88366.1;Name=RUP88366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121599.1;locus_tag=D8M40_07850;product=cysteine--tRNA ligase;protein_id=RUP88366.1;transl_table=11 RBME01000009.1 Genbank gene 97265 98206 . + . ID=gene-D8M40_07855;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=D8M40_07855 RBME01000009.1 Protein Homology CDS 97265 98206 . + 0 ID=cds-RUP88367.1;Parent=gene-D8M40_07855;Dbxref=NCBI_GP:RUP88367.1;Name=RUP88367.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121598.1;locus_tag=D8M40_07855;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=RUP88367.1;transl_table=11 RBME01000009.1 Genbank gene 98270 99187 . - . ID=gene-D8M40_07860;Name=D8M40_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07860 RBME01000009.1 Protein Homology CDS 98270 99187 . - 0 ID=cds-RUP88368.1;Parent=gene-D8M40_07860;Dbxref=NCBI_GP:RUP88368.1;Name=RUP88368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08843.9;locus_tag=D8M40_07860;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=RUP88368.1;transl_table=11 RBME01000009.1 Genbank gene 99174 100004 . - . ID=gene-D8M40_07865;Name=D8M40_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07865 RBME01000009.1 Protein Homology CDS 99174 100004 . - 0 ID=cds-RUP88369.1;Parent=gene-D8M40_07865;Dbxref=NCBI_GP:RUP88369.1;Name=RUP88369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13338.4;locus_tag=D8M40_07865;product=hypothetical protein;protein_id=RUP88369.1;transl_table=11 RBME01000009.1 Genbank pseudogene 100159 101371 . + . ID=gene-D8M40_07870;Name=D8M40_07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M40_07870;pseudo=true RBME01000009.1 Protein Homology CDS 100159 101371 . + 0 ID=cds-D8M40_07870;Parent=gene-D8M40_07870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121596.1;locus_tag=D8M40_07870;product=RtcB family protein;pseudo=true;transl_table=11 RBME01000009.1 Genbank gene 101464 102189 . + . ID=gene-D8M40_07875;Name=D8M40_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07875 RBME01000009.1 Protein Homology CDS 101464 102189 . + 0 ID=cds-RUP88370.1;Parent=gene-D8M40_07875;Dbxref=NCBI_GP:RUP88370.1;Name=RUP88370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274195.1;locus_tag=D8M40_07875;product=DoxX family protein;protein_id=RUP88370.1;transl_table=11 RBME01000009.1 Genbank gene 102389 103363 . - . ID=gene-D8M40_07880;Name=D8M40_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07880 RBME01000009.1 Protein Homology CDS 102389 103363 . - 0 ID=cds-RUP88371.1;Parent=gene-D8M40_07880;Dbxref=NCBI_GP:RUP88371.1;Name=RUP88371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325729.1;locus_tag=D8M40_07880;product=metal ABC transporter permease;protein_id=RUP88371.1;transl_table=11 RBME01000009.1 Genbank gene 103363 104052 . - . ID=gene-D8M40_07885;Name=D8M40_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07885 RBME01000009.1 Protein Homology CDS 103363 104052 . - 0 ID=cds-RUP88372.1;Parent=gene-D8M40_07885;Dbxref=NCBI_GP:RUP88372.1;Name=RUP88372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188893.1;locus_tag=D8M40_07885;product=metal ABC transporter ATP-binding protein;protein_id=RUP88372.1;transl_table=11 RBME01000009.1 Genbank gene 104059 105072 . - . ID=gene-D8M40_07890;Name=D8M40_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07890 RBME01000009.1 Protein Homology CDS 104059 105072 . - 0 ID=cds-RUP88385.1;Parent=gene-D8M40_07890;Dbxref=NCBI_GP:RUP88385.1;Name=RUP88385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188894.1;locus_tag=D8M40_07890;product=ABC transporter substrate-binding protein;protein_id=RUP88385.1;transl_table=11 RBME01000009.1 Genbank gene 105152 106258 . + . ID=gene-D8M40_07895;Name=D8M40_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M40_07895 RBME01000009.1 Protein Homology CDS 105152 106258 . + 0 ID=cds-RUP88373.1;Parent=gene-D8M40_07895;Dbxref=NCBI_GP:RUP88373.1;Name=RUP88373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121591.1;locus_tag=D8M40_07895;product=LacI family DNA-binding transcriptional regulator;protein_id=RUP88373.1;transl_table=11 ###