##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM398949v1 #!genome-build-accession NCBI_Assembly:GCA_003989495.1 #!annotation-date 10/03/2018 21:54:34 #!annotation-source NCBI ##sequence-region RBLY01000010.1 1 72673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000010.1 Genbank region 1 72673 . + . ID=RBLY01000010.1:1..72673;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000010.1 Genbank gene 526 705 . - . ID=gene-D8M19_09615;Name=D8M19_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09615 RBLY01000010.1 GeneMarkS+ CDS 526 705 . - 0 ID=cds-RUP91940.1;Parent=gene-D8M19_09615;Dbxref=NCBI_GP:RUP91940.1;Name=RUP91940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09615;product=hypothetical protein;protein_id=RUP91940.1;transl_table=11 RBLY01000010.1 Genbank gene 1682 2422 . + . ID=gene-D8M19_09620;Name=D8M19_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09620 RBLY01000010.1 GeneMarkS+ CDS 1682 2422 . + 0 ID=cds-RUP91941.1;Parent=gene-D8M19_09620;Dbxref=NCBI_GP:RUP91941.1;Name=RUP91941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09620;product=hypothetical protein;protein_id=RUP91941.1;transl_table=11 RBLY01000010.1 Genbank gene 2423 2995 . + . ID=gene-D8M19_09625;Name=D8M19_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09625 RBLY01000010.1 Protein Homology CDS 2423 2995 . + 0 ID=cds-RUP91942.1;Parent=gene-D8M19_09625;Dbxref=NCBI_GP:RUP91942.1;Name=RUP91942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04034;locus_tag=D8M19_09625;product=SdpA family antimicrobial peptide system protein;protein_id=RUP91942.1;transl_table=11 RBLY01000010.1 Genbank gene 2989 3924 . + . ID=gene-D8M19_09630;Name=D8M19_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09630 RBLY01000010.1 GeneMarkS+ CDS 2989 3924 . + 0 ID=cds-RUP91943.1;Parent=gene-D8M19_09630;Dbxref=NCBI_GP:RUP91943.1;Name=RUP91943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09630;product=hypothetical protein;protein_id=RUP91943.1;transl_table=11 RBLY01000010.1 Genbank gene 3943 4374 . + . ID=gene-D8M19_09635;Name=D8M19_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09635 RBLY01000010.1 GeneMarkS+ CDS 3943 4374 . + 0 ID=cds-RUP91944.1;Parent=gene-D8M19_09635;Dbxref=NCBI_GP:RUP91944.1;Name=RUP91944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09635;product=hypothetical protein;protein_id=RUP91944.1;transl_table=11 RBLY01000010.1 Genbank pseudogene 4450 4916 . - . ID=gene-D8M19_09640;Name=D8M19_09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09640;pseudo=true RBLY01000010.1 Protein Homology CDS 4450 4916 . - 0 ID=cds-D8M19_09640;Parent=gene-D8M19_09640;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014316121.1;locus_tag=D8M19_09640;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000010.1 Genbank pseudogene 5319 6515 . + . ID=gene-D8M19_09645;Name=D8M19_09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09645;pseudo=true RBLY01000010.1 Protein Homology CDS 5319 6515 . + 0 ID=cds-D8M19_09645;Parent=gene-D8M19_09645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558200.1;locus_tag=D8M19_09645;product=IS3 family transposase;pseudo=true;transl_table=11 RBLY01000010.1 Genbank gene 6685 8337 . + . ID=gene-D8M19_09650;Name=D8M19_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09650 RBLY01000010.1 Protein Homology CDS 6685 8337 . + 0 ID=cds-RUP91945.1;Parent=gene-D8M19_09650;Dbxref=NCBI_GP:RUP91945.1;Name=RUP91945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012730744.1;locus_tag=D8M19_09650;product=ABC transporter ATP-binding protein;protein_id=RUP91945.1;transl_table=11 RBLY01000010.1 Genbank gene 8330 8590 . + . ID=gene-D8M19_09655;Name=D8M19_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09655 RBLY01000010.1 Protein Homology CDS 8330 8590 . + 0 ID=cds-RUP91946.1;Parent=gene-D8M19_09655;Dbxref=NCBI_GP:RUP91946.1;Name=RUP91946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00106.23;locus_tag=D8M19_09655;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=RUP91946.1;transl_table=11 RBLY01000010.1 Genbank gene 8695 9885 . + . ID=gene-D8M19_09660;Name=D8M19_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09660 RBLY01000010.1 Protein Homology CDS 8695 9885 . + 0 ID=cds-RUP91947.1;Parent=gene-D8M19_09660;Dbxref=NCBI_GP:RUP91947.1;Name=RUP91947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M19_09660;product=MFS transporter;protein_id=RUP91947.1;transl_table=11 RBLY01000010.1 Genbank gene 9882 10187 . - . ID=gene-D8M19_09665;Name=D8M19_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09665 RBLY01000010.1 GeneMarkS+ CDS 9882 10187 . - 0 ID=cds-RUP91948.1;Parent=gene-D8M19_09665;Dbxref=NCBI_GP:RUP91948.1;Name=RUP91948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09665;product=hypothetical protein;protein_id=RUP91948.1;transl_table=11 RBLY01000010.1 Genbank gene 10410 10955 . + . ID=gene-D8M19_09670;Name=D8M19_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09670 RBLY01000010.1 Protein Homology CDS 10410 10955 . + 0 ID=cds-RUP91996.1;Parent=gene-D8M19_09670;Dbxref=NCBI_GP:RUP91996.1;Name=RUP91996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015381120.1;locus_tag=D8M19_09670;product=NAD(P)H-dependent oxidoreductase;protein_id=RUP91996.1;transl_table=11 RBLY01000010.1 Genbank gene 11003 12184 . + . ID=gene-D8M19_09675;Name=D8M19_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09675 RBLY01000010.1 Protein Homology CDS 11003 12184 . + 0 ID=cds-RUP91949.1;Parent=gene-D8M19_09675;Dbxref=NCBI_GP:RUP91949.1;Name=RUP91949.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M19_09675;product=sensor histidine kinase;protein_id=RUP91949.1;transl_table=11 RBLY01000010.1 Genbank gene 12202 12924 . + . ID=gene-D8M19_09680;Name=D8M19_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09680 RBLY01000010.1 Protein Homology CDS 12202 12924 . + 0 ID=cds-RUP91950.1;Parent=gene-D8M19_09680;Dbxref=NCBI_GP:RUP91950.1;Name=RUP91950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120152.1;locus_tag=D8M19_09680;product=DNA-binding response regulator;protein_id=RUP91950.1;transl_table=11 RBLY01000010.1 Genbank gene 13074 14006 . + . ID=gene-D8M19_09685;Name=D8M19_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09685 RBLY01000010.1 Protein Homology CDS 13074 14006 . + 0 ID=cds-RUP91951.1;Parent=gene-D8M19_09685;Dbxref=NCBI_GP:RUP91951.1;Name=RUP91951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120153.1;locus_tag=D8M19_09685;product=ABC transporter ATP-binding protein;protein_id=RUP91951.1;transl_table=11 RBLY01000010.1 Genbank gene 14010 14741 . + . ID=gene-D8M19_09690;Name=D8M19_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09690 RBLY01000010.1 GeneMarkS+ CDS 14010 14741 . + 0 ID=cds-RUP91952.1;Parent=gene-D8M19_09690;Dbxref=NCBI_GP:RUP91952.1;Name=RUP91952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09690;product=ABC transporter permease;protein_id=RUP91952.1;transl_table=11 RBLY01000010.1 Genbank pseudogene 14757 14885 . + . ID=gene-D8M19_09695;Name=D8M19_09695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09695;pseudo=true RBLY01000010.1 Protein Homology CDS 14757 14885 . + 0 ID=cds-D8M19_09695;Parent=gene-D8M19_09695;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120155.1;locus_tag=D8M19_09695;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 RBLY01000010.1 Genbank gene 14896 15936 . - . ID=gene-D8M19_09700;Name=D8M19_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09700 RBLY01000010.1 Protein Homology CDS 14896 15936 . - 0 ID=cds-RUP91953.1;Parent=gene-D8M19_09700;Dbxref=NCBI_GP:RUP91953.1;Name=RUP91953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120157.1;locus_tag=D8M19_09700;product=hypothetical protein;protein_id=RUP91953.1;transl_table=11 RBLY01000010.1 Genbank gene 16109 17494 . + . ID=gene-D8M19_09705;Name=D8M19_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09705 RBLY01000010.1 Protein Homology CDS 16109 17494 . + 0 ID=cds-RUP91954.1;Parent=gene-D8M19_09705;Dbxref=NCBI_GP:RUP91954.1;Name=RUP91954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M19_09705;product=MFS transporter;protein_id=RUP91954.1;transl_table=11 RBLY01000010.1 Genbank gene 17523 18596 . - . ID=gene-D8M19_09710;Name=D8M19_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09710 RBLY01000010.1 Protein Homology CDS 17523 18596 . - 0 ID=cds-RUP91955.1;Parent=gene-D8M19_09710;Dbxref=NCBI_GP:RUP91955.1;Name=RUP91955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120159.1;locus_tag=D8M19_09710;product=hypothetical protein;protein_id=RUP91955.1;transl_table=11 RBLY01000010.1 Genbank gene 18675 18920 . + . ID=gene-D8M19_09715;Name=D8M19_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09715 RBLY01000010.1 Protein Homology CDS 18675 18920 . + 0 ID=cds-RUP91956.1;Parent=gene-D8M19_09715;Dbxref=NCBI_GP:RUP91956.1;Name=RUP91956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012689984.1;locus_tag=D8M19_09715;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=RUP91956.1;transl_table=11 RBLY01000010.1 Genbank gene 18938 19021 . + . ID=gene-D8M19_09720;Name=D8M19_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09720 RBLY01000010.1 Protein Homology CDS 18938 19021 . + 0 ID=cds-RUP91997.1;Parent=gene-D8M19_09720;Dbxref=NCBI_GP:RUP91997.1;Name=RUP91997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007299764.1;locus_tag=D8M19_09720;product=hypothetical protein;protein_id=RUP91997.1;transl_table=11 RBLY01000010.1 Genbank gene 19018 21033 . - . ID=gene-D8M19_09725;Name=D8M19_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09725 RBLY01000010.1 Protein Homology CDS 19018 21033 . - 0 ID=cds-RUP91957.1;Parent=gene-D8M19_09725;Dbxref=NCBI_GP:RUP91957.1;Name=RUP91957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120160.1;locus_tag=D8M19_09725;product=BCCT family transporter;protein_id=RUP91957.1;transl_table=11 RBLY01000010.1 Genbank gene 21342 22886 . + . ID=gene-D8M19_09730;Name=D8M19_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09730 RBLY01000010.1 Protein Homology CDS 21342 22886 . + 0 ID=cds-RUP91958.1;Parent=gene-D8M19_09730;Dbxref=NCBI_GP:RUP91958.1;Name=RUP91958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120161.1;locus_tag=D8M19_09730;product=MFS transporter;protein_id=RUP91958.1;transl_table=11 RBLY01000010.1 Genbank gene 22883 23593 . + . ID=gene-D8M19_09735;Name=D8M19_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09735 RBLY01000010.1 Protein Homology CDS 22883 23593 . + 0 ID=cds-RUP91959.1;Parent=gene-D8M19_09735;Dbxref=NCBI_GP:RUP91959.1;Name=RUP91959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M19_09735;product=TetR/AcrR family transcriptional regulator;protein_id=RUP91959.1;transl_table=11 RBLY01000010.1 Genbank gene 23843 24166 . - . ID=gene-D8M19_09740;Name=D8M19_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09740 RBLY01000010.1 Protein Homology CDS 23843 24166 . - 0 ID=cds-RUP91960.1;Parent=gene-D8M19_09740;Dbxref=NCBI_GP:RUP91960.1;Name=RUP91960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822402.1;locus_tag=D8M19_09740;product=hypothetical protein;protein_id=RUP91960.1;transl_table=11 RBLY01000010.1 Genbank gene 24343 24561 . + . ID=gene-D8M19_09745;Name=D8M19_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09745 RBLY01000010.1 GeneMarkS+ CDS 24343 24561 . + 0 ID=cds-RUP91961.1;Parent=gene-D8M19_09745;Dbxref=NCBI_GP:RUP91961.1;Name=RUP91961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09745;product=hypothetical protein;protein_id=RUP91961.1;transl_table=11 RBLY01000010.1 Genbank gene 24639 24947 . + . ID=gene-D8M19_09750;Name=D8M19_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09750 RBLY01000010.1 Protein Homology CDS 24639 24947 . + 0 ID=cds-RUP91962.1;Parent=gene-D8M19_09750;Dbxref=NCBI_GP:RUP91962.1;Name=RUP91962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014308941.1;locus_tag=D8M19_09750;product=hypothetical protein;protein_id=RUP91962.1;transl_table=11 RBLY01000010.1 Genbank gene 25334 25876 . + . ID=gene-D8M19_09755;Name=D8M19_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09755 RBLY01000010.1 GeneMarkS+ CDS 25334 25876 . + 0 ID=cds-RUP91963.1;Parent=gene-D8M19_09755;Dbxref=NCBI_GP:RUP91963.1;Name=RUP91963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09755;product=hypothetical protein;protein_id=RUP91963.1;transl_table=11 RBLY01000010.1 Genbank gene 26317 27402 . + . ID=gene-D8M19_09760;Name=D8M19_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09760 RBLY01000010.1 Protein Homology CDS 26317 27402 . + 0 ID=cds-RUP91964.1;Parent=gene-D8M19_09760;Dbxref=NCBI_GP:RUP91964.1;Name=RUP91964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13338.4;locus_tag=D8M19_09760;product=hypothetical protein;protein_id=RUP91964.1;transl_table=11 RBLY01000010.1 Genbank gene 27248 28381 . + . ID=gene-D8M19_09765;Name=D8M19_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09765 RBLY01000010.1 Protein Homology CDS 27248 28381 . + 0 ID=cds-RUP91965.1;Parent=gene-D8M19_09765;Dbxref=NCBI_GP:RUP91965.1;Name=RUP91965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08843.9;locus_tag=D8M19_09765;product=hypothetical protein;protein_id=RUP91965.1;transl_table=11 RBLY01000010.1 Genbank gene 28368 30455 . + . ID=gene-D8M19_09770;Name=D8M19_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09770 RBLY01000010.1 Protein Homology CDS 28368 30455 . + 0 ID=cds-RUP91966.1;Parent=gene-D8M19_09770;Dbxref=NCBI_GP:RUP91966.1;Name=RUP91966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07693.12;locus_tag=D8M19_09770;product=hypothetical protein;protein_id=RUP91966.1;transl_table=11 RBLY01000010.1 Genbank gene 30576 30650 . - . ID=gene-D8M19_09775;Name=D8M19_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09775 RBLY01000010.1 Protein Homology CDS 30576 30650 . - 0 ID=cds-RUP91998.1;Parent=gene-D8M19_09775;Dbxref=NCBI_GP:RUP91998.1;Name=RUP91998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02796.13;locus_tag=D8M19_09775;product=hypothetical protein;protein_id=RUP91998.1;transl_table=11 RBLY01000010.1 Genbank pseudogene 30715 31929 . + . ID=gene-D8M19_09780;Name=D8M19_09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09780;pseudo=true RBLY01000010.1 Protein Homology CDS 30715 31929 . + 0 ID=cds-D8M19_09780;Parent=gene-D8M19_09780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611980.1;locus_tag=D8M19_09780;product=IS3 family transposase;pseudo=true;transl_table=11 RBLY01000010.1 Genbank gene 32654 33622 . - . ID=gene-D8M19_09785;Name=D8M19_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09785 RBLY01000010.1 Protein Homology CDS 32654 33622 . - 0 ID=cds-RUP91967.1;Parent=gene-D8M19_09785;Dbxref=NCBI_GP:RUP91967.1;Name=RUP91967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120163.1;locus_tag=D8M19_09785;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=RUP91967.1;transl_table=11 RBLY01000010.1 Genbank gene 33606 34856 . - . ID=gene-D8M19_09790;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=D8M19_09790 RBLY01000010.1 Protein Homology CDS 33606 34856 . - 0 ID=cds-RUP91968.1;Parent=gene-D8M19_09790;Dbxref=NCBI_GP:RUP91968.1;Name=RUP91968.1;gbkey=CDS;gene=tgt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280775.1;locus_tag=D8M19_09790;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=RUP91968.1;transl_table=11 RBLY01000010.1 Genbank gene 34938 37493 . - . ID=gene-D8M19_09795;Name=D8M19_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09795 RBLY01000010.1 Protein Homology CDS 34938 37493 . - 0 ID=cds-RUP91969.1;Parent=gene-D8M19_09795;Dbxref=NCBI_GP:RUP91969.1;Name=RUP91969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120165.1;locus_tag=D8M19_09795;product=MMPL family transporter;protein_id=RUP91969.1;transl_table=11 RBLY01000010.1 Genbank gene 37681 37771 . - . ID=gene-D8M19_09800;Name=D8M19_09800;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09800 RBLY01000010.1 tRNAscan-SE tRNA 37681 37771 . - . ID=rna-D8M19_09800;Parent=gene-D8M19_09800;anticodon=(pos:complement(37735..37737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09800;product=tRNA-Ser RBLY01000010.1 tRNAscan-SE exon 37681 37771 . - . ID=exon-D8M19_09800-1;Parent=rna-D8M19_09800;anticodon=(pos:complement(37735..37737));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09800;product=tRNA-Ser RBLY01000010.1 Genbank gene 38237 38461 . - . ID=gene-D8M19_09805;Name=D8M19_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09805 RBLY01000010.1 Protein Homology CDS 38237 38461 . - 0 ID=cds-RUP91970.1;Parent=gene-D8M19_09805;Dbxref=NCBI_GP:RUP91970.1;Name=RUP91970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016421846.1;locus_tag=D8M19_09805;product=CsbD family protein;protein_id=RUP91970.1;transl_table=11 RBLY01000010.1 Genbank gene 38519 38950 . - . ID=gene-D8M19_09810;Name=D8M19_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09810 RBLY01000010.1 Protein Homology CDS 38519 38950 . - 0 ID=cds-RUP91999.1;Parent=gene-D8M19_09810;Dbxref=NCBI_GP:RUP91999.1;Name=RUP91999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020397805.1;locus_tag=D8M19_09810;product=nucleoside deaminase;protein_id=RUP91999.1;transl_table=11 RBLY01000010.1 Genbank gene 39152 39646 . - . ID=gene-D8M19_09815;Name=D8M19_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09815 RBLY01000010.1 Protein Homology CDS 39152 39646 . - 0 ID=cds-RUP91971.1;Parent=gene-D8M19_09815;Dbxref=NCBI_GP:RUP91971.1;Name=RUP91971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120169.1;locus_tag=D8M19_09815;product=tRNA adenosine deaminase;protein_id=RUP91971.1;transl_table=11 RBLY01000010.1 Genbank gene 39686 40714 . + . ID=gene-D8M19_09820;Name=D8M19_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09820 RBLY01000010.1 Protein Homology CDS 39686 40714 . + 0 ID=cds-RUP91972.1;Parent=gene-D8M19_09820;Dbxref=NCBI_GP:RUP91972.1;Name=RUP91972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188399.1;locus_tag=D8M19_09820;product=prephenate dehydrogenase;protein_id=RUP91972.1;transl_table=11 RBLY01000010.1 Genbank gene 40711 42849 . - . ID=gene-D8M19_09825;Name=D8M19_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09825 RBLY01000010.1 Protein Homology CDS 40711 42849 . - 0 ID=cds-RUP91973.1;Parent=gene-D8M19_09825;Dbxref=NCBI_GP:RUP91973.1;Name=RUP91973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120171.1;locus_tag=D8M19_09825;product=acyl-CoA oxidase;protein_id=RUP91973.1;transl_table=11 RBLY01000010.1 Genbank gene 42947 44242 . - . ID=gene-D8M19_09830;Name=D8M19_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09830 RBLY01000010.1 Protein Homology CDS 42947 44242 . - 0 ID=cds-RUP91974.1;Parent=gene-D8M19_09830;Dbxref=NCBI_GP:RUP91974.1;Name=RUP91974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120172.1;locus_tag=D8M19_09830;product=acetyl-CoA C-acetyltransferase;protein_id=RUP91974.1;transl_table=11 RBLY01000010.1 Genbank gene 44403 45719 . + . ID=gene-D8M19_09835;Name=D8M19_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09835 RBLY01000010.1 Protein Homology CDS 44403 45719 . + 0 ID=cds-RUP91975.1;Parent=gene-D8M19_09835;Dbxref=NCBI_GP:RUP91975.1;Name=RUP91975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120173.1;locus_tag=D8M19_09835;product=3-oxoacyl-ACP reductase;protein_id=RUP91975.1;transl_table=11 RBLY01000010.1 Genbank gene 45752 46687 . + . ID=gene-D8M19_09840;Name=D8M19_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09840 RBLY01000010.1 Protein Homology CDS 45752 46687 . + 0 ID=cds-RUP91976.1;Parent=gene-D8M19_09840;Dbxref=NCBI_GP:RUP91976.1;Name=RUP91976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120174.1;locus_tag=D8M19_09840;product=hypothetical protein;protein_id=RUP91976.1;transl_table=11 RBLY01000010.1 Genbank gene 46853 48028 . + . ID=gene-D8M19_09845;Name=D8M19_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09845 RBLY01000010.1 Protein Homology CDS 46853 48028 . + 0 ID=cds-RUP91977.1;Parent=gene-D8M19_09845;Dbxref=NCBI_GP:RUP91977.1;Name=RUP91977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120175.1;locus_tag=D8M19_09845;product=aminopeptidase P family protein;protein_id=RUP91977.1;transl_table=11 RBLY01000010.1 Genbank gene 48386 49702 . + . ID=gene-D8M19_09850;Name=D8M19_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09850 RBLY01000010.1 Protein Homology CDS 48386 49702 . + 0 ID=cds-RUP91978.1;Parent=gene-D8M19_09850;Dbxref=NCBI_GP:RUP91978.1;Name=RUP91978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10011.7;locus_tag=D8M19_09850;product=DUF2254 domain-containing protein;protein_id=RUP91978.1;transl_table=11 RBLY01000010.1 Genbank gene 49881 50372 . + . ID=gene-D8M19_09855;Name=D8M19_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09855 RBLY01000010.1 GeneMarkS+ CDS 49881 50372 . + 0 ID=cds-RUP91979.1;Parent=gene-D8M19_09855;Dbxref=NCBI_GP:RUP91979.1;Name=RUP91979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09855;product=XRE family transcriptional regulator;protein_id=RUP91979.1;transl_table=11 RBLY01000010.1 Genbank gene 50575 50838 . + . ID=gene-D8M19_09860;Name=D8M19_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09860 RBLY01000010.1 GeneMarkS+ CDS 50575 50838 . + 0 ID=cds-RUP91980.1;Parent=gene-D8M19_09860;Dbxref=NCBI_GP:RUP91980.1;Name=RUP91980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09860;product=hypothetical protein;protein_id=RUP91980.1;transl_table=11 RBLY01000010.1 Genbank gene 51118 51738 . - . ID=gene-D8M19_09865;Name=D8M19_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09865 RBLY01000010.1 Protein Homology CDS 51118 51738 . - 0 ID=cds-RUP91981.1;Parent=gene-D8M19_09865;Dbxref=NCBI_GP:RUP91981.1;Name=RUP91981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14014.4;locus_tag=D8M19_09865;product=DUF4230 domain-containing protein;protein_id=RUP91981.1;transl_table=11 RBLY01000010.1 Genbank gene 52024 52959 . + . ID=gene-D8M19_09870;Name=D8M19_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09870 RBLY01000010.1 Protein Homology CDS 52024 52959 . + 0 ID=cds-RUP91982.1;Parent=gene-D8M19_09870;Dbxref=NCBI_GP:RUP91982.1;Name=RUP91982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00533.24%2CHMM:PF00929.22;locus_tag=D8M19_09870;product=DNA polymerase III subunit epsilon;protein_id=RUP91982.1;transl_table=11 RBLY01000010.1 Genbank gene 53057 54895 . - . ID=gene-D8M19_09875;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=D8M19_09875 RBLY01000010.1 Protein Homology CDS 53057 54895 . - 0 ID=cds-RUP91983.1;Parent=gene-D8M19_09875;Dbxref=NCBI_GP:RUP91983.1;Name=RUP91983.1;gbkey=CDS;gene=selB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327475.1;locus_tag=D8M19_09875;product=selenocysteine-specific translation elongation factor;protein_id=RUP91983.1;transl_table=11 RBLY01000010.1 Genbank gene 54896 56185 . - . ID=gene-D8M19_09880;Name=D8M19_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09880 RBLY01000010.1 Protein Homology CDS 54896 56185 . - 0 ID=cds-RUP92000.1;Parent=gene-D8M19_09880;Dbxref=NCBI_GP:RUP92000.1;Name=RUP92000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120196.1;locus_tag=D8M19_09880;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=RUP92000.1;transl_table=11 RBLY01000010.1 Genbank gene 56337 56432 . - . ID=gene-D8M19_09885;Name=D8M19_09885;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09885 RBLY01000010.1 tRNAscan-SE tRNA 56337 56432 . - . ID=rna-D8M19_09885;Parent=gene-D8M19_09885;anticodon=(pos:complement(56395..56397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09885;product=tRNA-Sec RBLY01000010.1 tRNAscan-SE exon 56337 56432 . - . ID=exon-D8M19_09885-1;Parent=rna-D8M19_09885;anticodon=(pos:complement(56395..56397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09885;product=tRNA-Sec RBLY01000010.1 Genbank gene 56532 57587 . + . ID=gene-D8M19_09890;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=D8M19_09890 RBLY01000010.1 Protein Homology CDS 56532 57587 . + 0 ID=cds-RUP91984.1;Parent=gene-D8M19_09890;Dbxref=NCBI_GP:RUP91984.1;Name=RUP91984.1;gbkey=CDS;gene=selD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400493.1;locus_tag=D8M19_09890;product=selenide%2C water dikinase SelD;protein_id=RUP91984.1;transl_table=11 RBLY01000010.1 Genbank gene 57640 58758 . - . ID=gene-D8M19_09895;Name=D8M19_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09895 RBLY01000010.1 Protein Homology CDS 57640 58758 . - 0 ID=cds-RUP91985.1;Parent=gene-D8M19_09895;Dbxref=NCBI_GP:RUP91985.1;Name=RUP91985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323572.1;locus_tag=D8M19_09895;product=nitrite reductase;protein_id=RUP91985.1;transl_table=11 RBLY01000010.1 Genbank gene 58755 59888 . - . ID=gene-D8M19_09900;Name=D8M19_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09900 RBLY01000010.1 Protein Homology CDS 58755 59888 . - 0 ID=cds-RUP91986.1;Parent=gene-D8M19_09900;Dbxref=NCBI_GP:RUP91986.1;Name=RUP91986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120199.1;locus_tag=D8M19_09900;product=4Fe-4S dicluster domain-containing protein;protein_id=RUP91986.1;transl_table=11 RBLY01000010.1 Genbank gene 59895 62588 . - . ID=gene-D8M19_09905;Name=D8M19_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09905 RBLY01000010.1 Protein Homology CDS 59895 62588 . - 0 ID=cds-RUP91987.1;Parent=gene-D8M19_09905;Dbxref=NCBI_GP:RUP91987.1;Name=RUP91987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120200.1;locus_tag=D8M19_09905;product=formate dehydrogenase;protein_id=RUP91987.1;transl_table=11 RBLY01000010.1 Genbank gene 62658 63224 . - . ID=gene-D8M19_09910;Name=D8M19_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09910 RBLY01000010.1 Protein Homology CDS 62658 63224 . - 0 ID=cds-RUP91988.1;Parent=gene-D8M19_09910;Dbxref=NCBI_GP:RUP91988.1;Name=RUP91988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822869.1;locus_tag=D8M19_09910;product=dehydrogenase;protein_id=RUP91988.1;transl_table=11 RBLY01000010.1 Genbank pseudogene 63530 64921 . + . ID=gene-D8M19_09915;Name=D8M19_09915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09915;pseudo=true RBLY01000010.1 Protein Homology CDS 63530 64921 . + 0 ID=cds-D8M19_09915;Parent=gene-D8M19_09915;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120202.1;locus_tag=D8M19_09915;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 RBLY01000010.1 Genbank gene 65699 66541 . + . ID=gene-D8M19_09920;Name=D8M19_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09920 RBLY01000010.1 Protein Homology CDS 65699 66541 . + 0 ID=cds-RUP91989.1;Parent=gene-D8M19_09920;Dbxref=NCBI_GP:RUP91989.1;Name=RUP91989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01814.21%2CHMM:PF04405.12;locus_tag=D8M19_09920;product=iron-sulfur cluster repair di-iron protein;protein_id=RUP91989.1;transl_table=11 RBLY01000010.1 Genbank gene 66654 67340 . - . ID=gene-D8M19_09925;Name=D8M19_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09925 RBLY01000010.1 Protein Homology CDS 66654 67340 . - 0 ID=cds-RUP91990.1;Parent=gene-D8M19_09925;Dbxref=NCBI_GP:RUP91990.1;Name=RUP91990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07947.12;locus_tag=D8M19_09925;product=hypothetical protein;protein_id=RUP91990.1;transl_table=11 RBLY01000010.1 Genbank gene 67368 67994 . - . ID=gene-D8M19_09930;Name=D8M19_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09930 RBLY01000010.1 Protein Homology CDS 67368 67994 . - 0 ID=cds-RUP91991.1;Parent=gene-D8M19_09930;Dbxref=NCBI_GP:RUP91991.1;Name=RUP91991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327737.1;locus_tag=D8M19_09930;product=class I SAM-dependent methyltransferase;protein_id=RUP91991.1;transl_table=11 RBLY01000010.1 Genbank gene 68097 68555 . - . ID=gene-D8M19_09935;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=D8M19_09935 RBLY01000010.1 Protein Homology CDS 68097 68555 . - 0 ID=cds-RUP91992.1;Parent=gene-D8M19_09935;Dbxref=NCBI_GP:RUP91992.1;Name=RUP91992.1;gbkey=CDS;gene=cynS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120210.1;locus_tag=D8M19_09935;product=cyanase;protein_id=RUP91992.1;transl_table=11 RBLY01000010.1 Genbank gene 68600 69358 . - . ID=gene-D8M19_09940;Name=D8M19_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09940 RBLY01000010.1 Protein Homology CDS 68600 69358 . - 0 ID=cds-RUP91993.1;Parent=gene-D8M19_09940;Dbxref=NCBI_GP:RUP91993.1;Name=RUP91993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468555.1;locus_tag=D8M19_09940;product=ATP-binding cassette domain-containing protein;protein_id=RUP91993.1;transl_table=11 RBLY01000010.1 Genbank gene 69355 70320 . - . ID=gene-D8M19_09945;Name=D8M19_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09945 RBLY01000010.1 Protein Homology CDS 69355 70320 . - 0 ID=cds-RUP91994.1;Parent=gene-D8M19_09945;Dbxref=NCBI_GP:RUP91994.1;Name=RUP91994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018023893.1;locus_tag=D8M19_09945;product=enterobactin ABC transporter permease;protein_id=RUP91994.1;transl_table=11 RBLY01000010.1 Genbank gene 70310 71224 . - . ID=gene-D8M19_09950;Name=D8M19_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09950 RBLY01000010.1 Protein Homology CDS 70310 71224 . - 0 ID=cds-RUP92001.1;Parent=gene-D8M19_09950;Dbxref=NCBI_GP:RUP92001.1;Name=RUP92001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012093163.1;locus_tag=D8M19_09950;product=ABC transporter permease;protein_id=RUP92001.1;transl_table=11 RBLY01000010.1 Genbank gene 71261 72262 . - . ID=gene-D8M19_09955;Name=D8M19_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09955 RBLY01000010.1 Protein Homology CDS 71261 72262 . - 0 ID=cds-RUP91995.1;Parent=gene-D8M19_09955;Dbxref=NCBI_GP:RUP91995.1;Name=RUP91995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01497.16;locus_tag=D8M19_09955;product=hypothetical protein;protein_id=RUP91995.1;transl_table=11 ##sequence-region RBLY01000011.1 1 72123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000011.1 Genbank region 1 72123 . + . ID=RBLY01000011.1:1..72123;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000011.1 Genbank gene 1 93 . + . ID=gene-D8M19_09960;Name=D8M19_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09960;partial=true;start_range=.,1 RBLY01000011.1 Protein Homology CDS 1 93 . + 0 ID=cds-RUP91874.1;Parent=gene-D8M19_09960;Dbxref=NCBI_GP:RUP91874.1;Name=RUP91874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M19_09960;partial=true;product=hypothetical protein;protein_id=RUP91874.1;start_range=.,1;transl_table=11 RBLY01000011.1 Genbank pseudogene 128 613 . - . ID=gene-D8M19_09965;Name=D8M19_09965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09965;pseudo=true RBLY01000011.1 Protein Homology CDS 128 613 . - 0 ID=cds-D8M19_09965;Parent=gene-D8M19_09965;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767629.1;locus_tag=D8M19_09965;product=exodeoxyribonuclease V subunit beta;pseudo=true;transl_table=11 RBLY01000011.1 Genbank gene 705 1991 . + . ID=gene-D8M19_09970;Name=D8M19_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09970 RBLY01000011.1 Protein Homology CDS 705 1991 . + 0 ID=cds-RUP91875.1;Parent=gene-D8M19_09970;Dbxref=NCBI_GP:RUP91875.1;Name=RUP91875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006285177.1;locus_tag=D8M19_09970;product=M18 family aminopeptidase;protein_id=RUP91875.1;transl_table=11 RBLY01000011.1 Genbank gene 2095 2931 . + . ID=gene-D8M19_09975;Name=D8M19_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09975 RBLY01000011.1 Protein Homology CDS 2095 2931 . + 0 ID=cds-RUP91876.1;Parent=gene-D8M19_09975;Dbxref=NCBI_GP:RUP91876.1;Name=RUP91876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600714.1;locus_tag=D8M19_09975;product=tRNA (adenine-N1)-methyltransferase;protein_id=RUP91876.1;transl_table=11 RBLY01000011.1 Genbank gene 3155 4681 . + . ID=gene-D8M19_09980;Name=arc;gbkey=Gene;gene=arc;gene_biotype=protein_coding;locus_tag=D8M19_09980 RBLY01000011.1 Protein Homology CDS 3155 4681 . + 0 ID=cds-RUP91877.1;Parent=gene-D8M19_09980;Dbxref=NCBI_GP:RUP91877.1;Name=RUP91877.1;gbkey=CDS;gene=arc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119535.1;locus_tag=D8M19_09980;product=proteasome ATPase;protein_id=RUP91877.1;transl_table=11 RBLY01000011.1 Genbank gene 4807 6324 . + . ID=gene-D8M19_09985;Name=D8M19_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09985 RBLY01000011.1 Protein Homology CDS 4807 6324 . + 0 ID=cds-RUP91878.1;Parent=gene-D8M19_09985;Dbxref=NCBI_GP:RUP91878.1;Name=RUP91878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119534.1;locus_tag=D8M19_09985;product=proteasome accessory factor PafA2;protein_id=RUP91878.1;transl_table=11 RBLY01000011.1 Genbank gene 6451 6660 . + . ID=gene-D8M19_09990;Name=D8M19_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09990 RBLY01000011.1 Protein Homology CDS 6451 6660 . + 0 ID=cds-RUP91879.1;Parent=gene-D8M19_09990;Dbxref=NCBI_GP:RUP91879.1;Name=RUP91879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324778.1;locus_tag=D8M19_09990;product=ubiquitin-like protein Pup;protein_id=RUP91879.1;transl_table=11 RBLY01000011.1 Genbank gene 6657 8093 . + . ID=gene-D8M19_09995;Name=pafA;gbkey=Gene;gene=pafA;gene_biotype=protein_coding;locus_tag=D8M19_09995 RBLY01000011.1 Protein Homology CDS 6657 8093 . + 0 ID=cds-RUP91880.1;Parent=gene-D8M19_09995;Dbxref=NCBI_GP:RUP91880.1;Name=RUP91880.1;gbkey=CDS;gene=pafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119532.1;locus_tag=D8M19_09995;product=Pup--protein ligase;protein_id=RUP91880.1;transl_table=11 RBLY01000011.1 Genbank gene 8099 9106 . + . ID=gene-D8M19_10000;Name=D8M19_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10000 RBLY01000011.1 Protein Homology CDS 8099 9106 . + 0 ID=cds-RUP91881.1;Parent=gene-D8M19_10000;Dbxref=NCBI_GP:RUP91881.1;Name=RUP91881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13280.4;locus_tag=D8M19_10000;product=WYL domain-containing protein;protein_id=RUP91881.1;transl_table=11 RBLY01000011.1 Genbank gene 9103 10104 . + . ID=gene-D8M19_10005;Name=D8M19_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10005 RBLY01000011.1 Protein Homology CDS 9103 10104 . + 0 ID=cds-RUP91882.1;Parent=gene-D8M19_10005;Dbxref=NCBI_GP:RUP91882.1;Name=RUP91882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119530.1;locus_tag=D8M19_10005;product=WYL domain-containing protein;protein_id=RUP91882.1;transl_table=11 RBLY01000011.1 Genbank gene 10168 10491 . + . ID=gene-D8M19_10010;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=D8M19_10010 RBLY01000011.1 Protein Homology CDS 10168 10491 . + 0 ID=cds-RUP91883.1;Parent=gene-D8M19_10010;Dbxref=NCBI_GP:RUP91883.1;Name=RUP91883.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119529.1;locus_tag=D8M19_10010;product=twin-arginine translocase TatA/TatE family subunit;protein_id=RUP91883.1;transl_table=11 RBLY01000011.1 Genbank gene 10755 11693 . + . ID=gene-D8M19_10015;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=D8M19_10015 RBLY01000011.1 Protein Homology CDS 10755 11693 . + 0 ID=cds-RUP91884.1;Parent=gene-D8M19_10015;Dbxref=NCBI_GP:RUP91884.1;Name=RUP91884.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119528.1;locus_tag=D8M19_10015;product=twin-arginine translocase subunit TatC;protein_id=RUP91884.1;transl_table=11 RBLY01000011.1 Genbank gene 11705 14515 . + . ID=gene-D8M19_10020;Name=D8M19_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10020 RBLY01000011.1 Protein Homology CDS 11705 14515 . + 0 ID=cds-RUP91885.1;Parent=gene-D8M19_10020;Dbxref=NCBI_GP:RUP91885.1;Name=RUP91885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279213.1;locus_tag=D8M19_10020;product=DEAD/DEAH box helicase;protein_id=RUP91885.1;transl_table=11 RBLY01000011.1 Genbank gene 14540 15205 . + . ID=gene-D8M19_10025;Name=D8M19_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10025 RBLY01000011.1 Protein Homology CDS 14540 15205 . + 0 ID=cds-RUP91886.1;Parent=gene-D8M19_10025;Dbxref=NCBI_GP:RUP91886.1;Name=RUP91886.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04186.11;locus_tag=D8M19_10025;product=FxsA family protein;protein_id=RUP91886.1;transl_table=11 RBLY01000011.1 Genbank gene 15256 16938 . + . ID=gene-D8M19_10030;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=D8M19_10030 RBLY01000011.1 Protein Homology CDS 15256 16938 . + 0 ID=cds-RUP91887.1;Parent=gene-D8M19_10030;Dbxref=NCBI_GP:RUP91887.1;Name=RUP91887.1;gbkey=CDS;gene=lnt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119525.1;locus_tag=D8M19_10030;product=apolipoprotein N-acyltransferase;protein_id=RUP91887.1;transl_table=11 RBLY01000011.1 Genbank gene 16946 17827 . + . ID=gene-D8M19_10035;Name=D8M19_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10035 RBLY01000011.1 Protein Homology CDS 16946 17827 . + 0 ID=cds-RUP91888.1;Parent=gene-D8M19_10035;Dbxref=NCBI_GP:RUP91888.1;Name=RUP91888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119524.1;locus_tag=D8M19_10035;product=polyprenol monophosphomannose synthase;protein_id=RUP91888.1;transl_table=11 RBLY01000011.1 Genbank gene 17953 18339 . - . ID=gene-D8M19_10040;Name=D8M19_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10040 RBLY01000011.1 Protein Homology CDS 17953 18339 . - 0 ID=cds-RUP91889.1;Parent=gene-D8M19_10040;Dbxref=NCBI_GP:RUP91889.1;Name=RUP91889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119523.1;locus_tag=D8M19_10040;product=RNA polymerase-binding protein RbpA;protein_id=RUP91889.1;transl_table=11 RBLY01000011.1 Genbank gene 18588 18923 . + . ID=gene-D8M19_10045;Name=D8M19_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10045 RBLY01000011.1 Protein Homology CDS 18588 18923 . + 0 ID=cds-RUP91890.1;Parent=gene-D8M19_10045;Dbxref=NCBI_GP:RUP91890.1;Name=RUP91890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651230.1;locus_tag=D8M19_10045;product=hypothetical protein;protein_id=RUP91890.1;transl_table=11 RBLY01000011.1 Genbank gene 18923 19636 . + . ID=gene-D8M19_10050;Name=D8M19_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10050 RBLY01000011.1 Protein Homology CDS 18923 19636 . + 0 ID=cds-RUP91891.1;Parent=gene-D8M19_10050;Dbxref=NCBI_GP:RUP91891.1;Name=RUP91891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119521.1;locus_tag=D8M19_10050;product=YceI family protein;protein_id=RUP91891.1;transl_table=11 RBLY01000011.1 Genbank gene 19828 21480 . + . ID=gene-D8M19_10055;Name=D8M19_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10055 RBLY01000011.1 Protein Homology CDS 19828 21480 . + 0 ID=cds-RUP91892.1;Parent=gene-D8M19_10055;Dbxref=NCBI_GP:RUP91892.1;Name=RUP91892.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06889.9;locus_tag=D8M19_10055;product=DUF1266 domain-containing protein;protein_id=RUP91892.1;transl_table=11 RBLY01000011.1 Genbank gene 21516 22829 . - . ID=gene-D8M19_10060;Name=D8M19_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10060 RBLY01000011.1 Protein Homology CDS 21516 22829 . - 0 ID=cds-RUP91893.1;Parent=gene-D8M19_10060;Dbxref=NCBI_GP:RUP91893.1;Name=RUP91893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119518.1;locus_tag=D8M19_10060;product=SAM-dependent methyltransferase;protein_id=RUP91893.1;transl_table=11 RBLY01000011.1 Genbank gene 22981 24378 . + . ID=gene-D8M19_10065;Name=D8M19_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10065 RBLY01000011.1 Protein Homology CDS 22981 24378 . + 0 ID=cds-RUP91894.1;Parent=gene-D8M19_10065;Dbxref=NCBI_GP:RUP91894.1;Name=RUP91894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119517.1;locus_tag=D8M19_10065;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP91894.1;transl_table=11 RBLY01000011.1 Genbank gene 24590 26098 . + . ID=gene-D8M19_10070;Name=D8M19_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10070 RBLY01000011.1 Protein Homology CDS 24590 26098 . + 0 ID=cds-RUP91895.1;Parent=gene-D8M19_10070;Dbxref=NCBI_GP:RUP91895.1;Name=RUP91895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400857.1;locus_tag=D8M19_10070;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=RUP91895.1;transl_table=11 RBLY01000011.1 Genbank gene 26126 26599 . - . ID=gene-D8M19_10075;Name=D8M19_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10075 RBLY01000011.1 Protein Homology CDS 26126 26599 . - 0 ID=cds-RUP91896.1;Parent=gene-D8M19_10075;Dbxref=NCBI_GP:RUP91896.1;Name=RUP91896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119515.1;locus_tag=D8M19_10075;product=PaaI family thioesterase;protein_id=RUP91896.1;transl_table=11 RBLY01000011.1 Genbank gene 26713 28179 . + . ID=gene-D8M19_10080;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=D8M19_10080 RBLY01000011.1 Protein Homology CDS 26713 28179 . + 0 ID=cds-RUP91897.1;Parent=gene-D8M19_10080;Dbxref=NCBI_GP:RUP91897.1;Name=RUP91897.1;gbkey=CDS;gene=gndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119514.1;locus_tag=D8M19_10080;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=RUP91897.1;transl_table=11 RBLY01000011.1 Genbank gene 28204 29754 . - . ID=gene-D8M19_10085;Name=D8M19_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10085 RBLY01000011.1 Protein Homology CDS 28204 29754 . - 0 ID=cds-RUP91898.1;Parent=gene-D8M19_10085;Dbxref=NCBI_GP:RUP91898.1;Name=RUP91898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119513.1;locus_tag=D8M19_10085;product=DASS family sodium-coupled anion symporter;protein_id=RUP91898.1;transl_table=11 RBLY01000011.1 Genbank gene 29970 31415 . + . ID=gene-D8M19_10090;Name=D8M19_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10090 RBLY01000011.1 Protein Homology CDS 29970 31415 . + 0 ID=cds-RUP91899.1;Parent=gene-D8M19_10090;Dbxref=NCBI_GP:RUP91899.1;Name=RUP91899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767584.1;locus_tag=D8M19_10090;product=DEAD/DEAH box helicase;protein_id=RUP91899.1;transl_table=11 RBLY01000011.1 Genbank gene 31462 32334 . + . ID=gene-D8M19_10095;Name=D8M19_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10095 RBLY01000011.1 Protein Homology CDS 31462 32334 . + 0 ID=cds-RUP91900.1;Parent=gene-D8M19_10095;Dbxref=NCBI_GP:RUP91900.1;Name=RUP91900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324743.1;locus_tag=D8M19_10095;product=hypothetical protein;protein_id=RUP91900.1;transl_table=11 RBLY01000011.1 Genbank gene 32312 33865 . + . ID=gene-D8M19_10100;Name=D8M19_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10100 RBLY01000011.1 Protein Homology CDS 32312 33865 . + 0 ID=cds-RUP91901.1;Parent=gene-D8M19_10100;Dbxref=NCBI_GP:RUP91901.1;Name=RUP91901.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00092.26;locus_tag=D8M19_10100;product=VWA domain-containing protein;protein_id=RUP91901.1;transl_table=11 RBLY01000011.1 Genbank gene 33896 34474 . - . ID=gene-D8M19_10105;Name=D8M19_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10105 RBLY01000011.1 Protein Homology CDS 33896 34474 . - 0 ID=cds-RUP91933.1;Parent=gene-D8M19_10105;Dbxref=NCBI_GP:RUP91933.1;Name=RUP91933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329565.1;locus_tag=D8M19_10105;product=MerR family transcriptional regulator;protein_id=RUP91933.1;transl_table=11 RBLY01000011.1 Genbank gene 34778 35527 . - . ID=gene-D8M19_10110;Name=D8M19_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10110 RBLY01000011.1 Protein Homology CDS 34778 35527 . - 0 ID=cds-RUP91902.1;Parent=gene-D8M19_10110;Dbxref=NCBI_GP:RUP91902.1;Name=RUP91902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651204.1;locus_tag=D8M19_10110;product=MerR family transcriptional regulator;protein_id=RUP91902.1;transl_table=11 RBLY01000011.1 Genbank gene 35537 35968 . - . ID=gene-D8M19_10115;Name=D8M19_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10115 RBLY01000011.1 Protein Homology CDS 35537 35968 . - 0 ID=cds-RUP91903.1;Parent=gene-D8M19_10115;Dbxref=NCBI_GP:RUP91903.1;Name=RUP91903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119507.1;locus_tag=D8M19_10115;product=FHA domain-containing protein;protein_id=RUP91903.1;transl_table=11 RBLY01000011.1 Genbank gene 36174 38474 . - . ID=gene-D8M19_10120;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=D8M19_10120 RBLY01000011.1 Protein Homology CDS 36174 38474 . - 0 ID=cds-RUP91904.1;Parent=gene-D8M19_10120;Dbxref=NCBI_GP:RUP91904.1;Name=RUP91904.1;gbkey=CDS;gene=secA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119506.1;locus_tag=D8M19_10120;product=accessory Sec system translocase SecA2;protein_id=RUP91904.1;transl_table=11 RBLY01000011.1 Genbank gene 38561 39406 . - . ID=gene-D8M19_10125;Name=D8M19_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10125 RBLY01000011.1 Protein Homology CDS 38561 39406 . - 0 ID=cds-RUP91934.1;Parent=gene-D8M19_10125;Dbxref=NCBI_GP:RUP91934.1;Name=RUP91934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282862.1;locus_tag=D8M19_10125;product=esterase;protein_id=RUP91934.1;transl_table=11 RBLY01000011.1 Genbank gene 39706 41523 . - . ID=gene-D8M19_10130;Name=D8M19_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10130 RBLY01000011.1 Protein Homology CDS 39706 41523 . - 0 ID=cds-RUP91905.1;Parent=gene-D8M19_10130;Dbxref=NCBI_GP:RUP91905.1;Name=RUP91905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119504.1;locus_tag=D8M19_10130;product=ABC transporter ATP-binding protein;protein_id=RUP91905.1;transl_table=11 RBLY01000011.1 Genbank gene 41526 43082 . - . ID=gene-D8M19_10135;Name=D8M19_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10135 RBLY01000011.1 Protein Homology CDS 41526 43082 . - 0 ID=cds-RUP91906.1;Parent=gene-D8M19_10135;Dbxref=NCBI_GP:RUP91906.1;Name=RUP91906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119503.1;locus_tag=D8M19_10135;product=ABC transporter ATP-binding protein;protein_id=RUP91906.1;transl_table=11 RBLY01000011.1 Genbank gene 43114 43908 . + . ID=gene-D8M19_10140;Name=D8M19_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10140 RBLY01000011.1 Protein Homology CDS 43114 43908 . + 0 ID=cds-RUP91907.1;Parent=gene-D8M19_10140;Dbxref=NCBI_GP:RUP91907.1;Name=RUP91907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840361.1;locus_tag=D8M19_10140;product=class I SAM-dependent methyltransferase;protein_id=RUP91907.1;transl_table=11 RBLY01000011.1 Genbank gene 43982 46192 . - . ID=gene-D8M19_10145;Name=D8M19_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10145 RBLY01000011.1 Protein Homology CDS 43982 46192 . - 0 ID=cds-RUP91908.1;Parent=gene-D8M19_10145;Dbxref=NCBI_GP:RUP91908.1;Name=RUP91908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119501.1;locus_tag=D8M19_10145;product=bifunctional cytidylate kinase/GTPase Der;protein_id=RUP91908.1;transl_table=11 RBLY01000011.1 Genbank gene 46238 47089 . - . ID=gene-D8M19_10150;Name=D8M19_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10150 RBLY01000011.1 Protein Homology CDS 46238 47089 . - 0 ID=cds-RUP91909.1;Parent=gene-D8M19_10150;Dbxref=NCBI_GP:RUP91909.1;Name=RUP91909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119500.1;locus_tag=D8M19_10150;product=rRNA pseudouridine synthase;protein_id=RUP91909.1;transl_table=11 RBLY01000011.1 Genbank gene 47119 47718 . - . ID=gene-D8M19_10155;Name=D8M19_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10155 RBLY01000011.1 Protein Homology CDS 47119 47718 . - 0 ID=cds-RUP91910.1;Parent=gene-D8M19_10155;Dbxref=NCBI_GP:RUP91910.1;Name=RUP91910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119499.1;locus_tag=D8M19_10155;product=SMC-Scp complex subunit ScpB;protein_id=RUP91910.1;transl_table=11 RBLY01000011.1 Genbank gene 47825 48607 . - . ID=gene-D8M19_10160;Name=D8M19_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10160 RBLY01000011.1 Protein Homology CDS 47825 48607 . - 0 ID=cds-RUP91935.1;Parent=gene-D8M19_10160;Dbxref=NCBI_GP:RUP91935.1;Name=RUP91935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531427.1;locus_tag=D8M19_10160;product=segregation/condensation protein A;protein_id=RUP91935.1;transl_table=11 RBLY01000011.1 Genbank gene 48676 49551 . - . ID=gene-D8M19_10165;Name=D8M19_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10165 RBLY01000011.1 Protein Homology CDS 48676 49551 . - 0 ID=cds-RUP91911.1;Parent=gene-D8M19_10165;Dbxref=NCBI_GP:RUP91911.1;Name=RUP91911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119497.1;locus_tag=D8M19_10165;product=ParA family protein;protein_id=RUP91911.1;transl_table=11 RBLY01000011.1 Genbank gene 49759 50064 . - . ID=gene-D8M19_10170;Name=D8M19_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10170 RBLY01000011.1 GeneMarkS+ CDS 49759 50064 . - 0 ID=cds-RUP91912.1;Parent=gene-D8M19_10170;Dbxref=NCBI_GP:RUP91912.1;Name=RUP91912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10170;product=hypothetical protein;protein_id=RUP91912.1;transl_table=11 RBLY01000011.1 Genbank gene 50182 50490 . - . ID=gene-D8M19_10175;Name=D8M19_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10175 RBLY01000011.1 GeneMarkS+ CDS 50182 50490 . - 0 ID=cds-RUP91913.1;Parent=gene-D8M19_10175;Dbxref=NCBI_GP:RUP91913.1;Name=RUP91913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10175;product=hypothetical protein;protein_id=RUP91913.1;transl_table=11 RBLY01000011.1 Genbank gene 51015 51263 . - . ID=gene-D8M19_10180;Name=D8M19_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10180 RBLY01000011.1 GeneMarkS+ CDS 51015 51263 . - 0 ID=cds-RUP91914.1;Parent=gene-D8M19_10180;Dbxref=NCBI_GP:RUP91914.1;Name=RUP91914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10180;product=hypothetical protein;protein_id=RUP91914.1;transl_table=11 RBLY01000011.1 Genbank pseudogene 51626 51806 . + . ID=gene-D8M19_10185;Name=D8M19_10185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10185;pseudo=true RBLY01000011.1 Protein Homology CDS 51626 51806 . + 0 ID=cds-D8M19_10185;Parent=gene-D8M19_10185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120348.1;locus_tag=D8M19_10185;product=transposase;pseudo=true;transl_table=11 RBLY01000011.1 Genbank gene 51843 52367 . + . ID=gene-D8M19_10190;Name=D8M19_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10190 RBLY01000011.1 Protein Homology CDS 51843 52367 . + 0 ID=cds-RUP91915.1;Parent=gene-D8M19_10190;Dbxref=NCBI_GP:RUP91915.1;Name=RUP91915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M19_10190;product=hypothetical protein;protein_id=RUP91915.1;transl_table=11 RBLY01000011.1 Genbank gene 52186 52554 . + . ID=gene-D8M19_10195;Name=D8M19_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10195 RBLY01000011.1 Protein Homology CDS 52186 52554 . + 0 ID=cds-RUP91916.1;Parent=gene-D8M19_10195;Dbxref=NCBI_GP:RUP91916.1;Name=RUP91916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M19_10195;product=transposase;protein_id=RUP91916.1;transl_table=11 RBLY01000011.1 Genbank gene 52762 54003 . - . ID=gene-D8M19_10200;Name=D8M19_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10200 RBLY01000011.1 Protein Homology CDS 52762 54003 . - 0 ID=cds-RUP91917.1;Parent=gene-D8M19_10200;Dbxref=NCBI_GP:RUP91917.1;Name=RUP91917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;locus_tag=D8M19_10200;product=MFS transporter;protein_id=RUP91917.1;transl_table=11 RBLY01000011.1 Genbank gene 53996 57400 . - . ID=gene-D8M19_10205;Name=D8M19_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10205 RBLY01000011.1 Protein Homology CDS 53996 57400 . - 0 ID=cds-RUP91918.1;Parent=gene-D8M19_10205;Dbxref=NCBI_GP:RUP91918.1;Name=RUP91918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06276.10;locus_tag=D8M19_10205;product=siderophore biosynthesis protein;protein_id=RUP91918.1;transl_table=11 RBLY01000011.1 Genbank gene 57438 58229 . - . ID=gene-D8M19_10210;Name=D8M19_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10210 RBLY01000011.1 Protein Homology CDS 57438 58229 . - 0 ID=cds-RUP91919.1;Parent=gene-D8M19_10210;Dbxref=NCBI_GP:RUP91919.1;Name=RUP91919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013169968.1;locus_tag=D8M19_10210;product=ABC transporter ATP-binding protein;protein_id=RUP91919.1;transl_table=11 RBLY01000011.1 Genbank gene 58282 59268 . - . ID=gene-D8M19_10215;Name=D8M19_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10215 RBLY01000011.1 Protein Homology CDS 58282 59268 . - 0 ID=cds-RUP91920.1;Parent=gene-D8M19_10215;Dbxref=NCBI_GP:RUP91920.1;Name=RUP91920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004566909.1;locus_tag=D8M19_10215;product=iron ABC transporter permease;protein_id=RUP91920.1;transl_table=11 RBLY01000011.1 Genbank gene 59292 60191 . - . ID=gene-D8M19_10220;Name=D8M19_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10220 RBLY01000011.1 Protein Homology CDS 59292 60191 . - 0 ID=cds-RUP91921.1;Parent=gene-D8M19_10220;Dbxref=NCBI_GP:RUP91921.1;Name=RUP91921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301460.1;locus_tag=D8M19_10220;product=iron ABC transporter permease;protein_id=RUP91921.1;transl_table=11 RBLY01000011.1 Genbank gene 60314 61249 . - . ID=gene-D8M19_10225;Name=D8M19_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10225 RBLY01000011.1 Protein Homology CDS 60314 61249 . - 0 ID=cds-RUP91922.1;Parent=gene-D8M19_10225;Dbxref=NCBI_GP:RUP91922.1;Name=RUP91922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836333.1;locus_tag=D8M19_10225;product=iron siderophore-binding protein;protein_id=RUP91922.1;transl_table=11 RBLY01000011.1 Genbank gene 61412 62341 . - . ID=gene-D8M19_10230;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=D8M19_10230 RBLY01000011.1 Protein Homology CDS 61412 62341 . - 0 ID=cds-RUP91923.1;Parent=gene-D8M19_10230;Dbxref=NCBI_GP:RUP91923.1;Name=RUP91923.1;gbkey=CDS;gene=xerD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119494.1;locus_tag=D8M19_10230;product=site-specific tyrosine recombinase XerD;protein_id=RUP91923.1;transl_table=11 RBLY01000011.1 Genbank gene 62341 63096 . - . ID=gene-D8M19_10235;Name=D8M19_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10235 RBLY01000011.1 Protein Homology CDS 62341 63096 . - 0 ID=cds-RUP91924.1;Parent=gene-D8M19_10235;Dbxref=NCBI_GP:RUP91924.1;Name=RUP91924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119493.1;locus_tag=D8M19_10235;product=NUDIX hydrolase;protein_id=RUP91924.1;transl_table=11 RBLY01000011.1 Genbank gene 63099 64046 . - . ID=gene-D8M19_10240;Name=D8M19_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10240 RBLY01000011.1 Protein Homology CDS 63099 64046 . - 0 ID=cds-RUP91925.1;Parent=gene-D8M19_10240;Dbxref=NCBI_GP:RUP91925.1;Name=RUP91925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11382.6;locus_tag=D8M19_10240;product=copper transporter;protein_id=RUP91925.1;transl_table=11 RBLY01000011.1 Genbank gene 64046 65230 . - . ID=gene-D8M19_10245;Name=D8M19_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10245 RBLY01000011.1 Protein Homology CDS 64046 65230 . - 0 ID=cds-RUP91926.1;Parent=gene-D8M19_10245;Dbxref=NCBI_GP:RUP91926.1;Name=RUP91926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119491.1;locus_tag=D8M19_10245;product=thiamine pyrophosphokinase;protein_id=RUP91926.1;transl_table=11 RBLY01000011.1 Genbank gene 65281 67008 . - . ID=gene-D8M19_10250;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=D8M19_10250 RBLY01000011.1 Protein Homology CDS 65281 67008 . - 0 ID=cds-RUP91927.1;Parent=gene-D8M19_10250;Dbxref=NCBI_GP:RUP91927.1;Name=RUP91927.1;gbkey=CDS;gene=recN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006063285.1;locus_tag=D8M19_10250;product=DNA repair protein RecN;protein_id=RUP91927.1;transl_table=11 RBLY01000011.1 Genbank gene 67017 68003 . - . ID=gene-D8M19_10255;Name=D8M19_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10255 RBLY01000011.1 Protein Homology CDS 67017 68003 . - 0 ID=cds-RUP91928.1;Parent=gene-D8M19_10255;Dbxref=NCBI_GP:RUP91928.1;Name=RUP91928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863787.1;locus_tag=D8M19_10255;product=NAD kinase;protein_id=RUP91928.1;transl_table=11 RBLY01000011.1 Genbank gene 68015 68851 . - . ID=gene-D8M19_10260;Name=D8M19_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10260 RBLY01000011.1 Protein Homology CDS 68015 68851 . - 0 ID=cds-RUP91929.1;Parent=gene-D8M19_10260;Dbxref=NCBI_GP:RUP91929.1;Name=RUP91929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018024172.1;locus_tag=D8M19_10260;product=TlyA family RNA methyltransferase;protein_id=RUP91929.1;transl_table=11 RBLY01000011.1 Genbank gene 69087 70115 . - . ID=gene-D8M19_10265;Name=D8M19_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10265 RBLY01000011.1 Protein Homology CDS 69087 70115 . - 0 ID=cds-RUP91930.1;Parent=gene-D8M19_10265;Dbxref=NCBI_GP:RUP91930.1;Name=RUP91930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531409.1;locus_tag=D8M19_10265;product=HAD-IIA family hydrolase;protein_id=RUP91930.1;transl_table=11 RBLY01000011.1 Genbank gene 70112 70945 . - . ID=gene-D8M19_10270;Name=D8M19_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10270 RBLY01000011.1 Protein Homology CDS 70112 70945 . - 0 ID=cds-RUP91931.1;Parent=gene-D8M19_10270;Dbxref=NCBI_GP:RUP91931.1;Name=RUP91931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119485.1;locus_tag=D8M19_10270;product=hypothetical protein;protein_id=RUP91931.1;transl_table=11 RBLY01000011.1 Genbank gene 71260 71805 . + . ID=gene-D8M19_10275;Name=D8M19_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10275 RBLY01000011.1 Protein Homology CDS 71260 71805 . + 0 ID=cds-RUP91932.1;Parent=gene-D8M19_10275;Dbxref=NCBI_GP:RUP91932.1;Name=RUP91932.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00565.15;locus_tag=D8M19_10275;product=hypothetical protein;protein_id=RUP91932.1;transl_table=11 RBLY01000011.1 Genbank gene 72002 72120 . - . ID=gene-D8M19_10280;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M19_10280 RBLY01000011.1 cmsearch rRNA 72002 72120 . - . ID=rna-D8M19_10280;Parent=gene-D8M19_10280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_10280;product=5S ribosomal RNA RBLY01000011.1 cmsearch exon 72002 72120 . - . ID=exon-D8M19_10280-1;Parent=rna-D8M19_10280;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_10280;product=5S ribosomal RNA ##sequence-region RBLY01000012.1 1 50935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000012.1 Genbank region 1 50935 . + . ID=RBLY01000012.1:1..50935;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000012.1 Genbank gene 128 216 . - . ID=gene-D8M19_10285;Name=D8M19_10285;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_10285 RBLY01000012.1 tRNAscan-SE tRNA 128 216 . - . ID=rna-D8M19_10285;Parent=gene-D8M19_10285;anticodon=(pos:complement(180..182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_10285;product=tRNA-Ser RBLY01000012.1 tRNAscan-SE exon 128 216 . - . ID=exon-D8M19_10285-1;Parent=rna-D8M19_10285;anticodon=(pos:complement(180..182));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_10285;product=tRNA-Ser RBLY01000012.1 Genbank gene 288 1772 . - . ID=gene-D8M19_10290;Name=D8M19_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10290 RBLY01000012.1 GeneMarkS+ CDS 288 1772 . - 0 ID=cds-RUP91491.1;Parent=gene-D8M19_10290;Dbxref=NCBI_GP:RUP91491.1;Name=RUP91491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10290;product=hypothetical protein;protein_id=RUP91491.1;transl_table=11 RBLY01000012.1 Genbank gene 1776 3095 . - . ID=gene-D8M19_10295;Name=D8M19_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10295 RBLY01000012.1 Protein Homology CDS 1776 3095 . - 0 ID=cds-RUP91492.1;Parent=gene-D8M19_10295;Dbxref=NCBI_GP:RUP91492.1;Name=RUP91492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11271.6;locus_tag=D8M19_10295;product=DUF3068 domain-containing protein;protein_id=RUP91492.1;transl_table=11 RBLY01000012.1 Genbank gene 3242 3658 . + . ID=gene-D8M19_10300;Name=D8M19_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10300 RBLY01000012.1 GeneMarkS+ CDS 3242 3658 . + 0 ID=cds-RUP91493.1;Parent=gene-D8M19_10300;Dbxref=NCBI_GP:RUP91493.1;Name=RUP91493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10300;product=hypothetical protein;protein_id=RUP91493.1;transl_table=11 RBLY01000012.1 Genbank gene 3707 4843 . + . ID=gene-D8M19_10305;Name=D8M19_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10305 RBLY01000012.1 Protein Homology CDS 3707 4843 . + 0 ID=cds-RUP91494.1;Parent=gene-D8M19_10305;Dbxref=NCBI_GP:RUP91494.1;Name=RUP91494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120690.1;locus_tag=D8M19_10305;product=acyltransferase;protein_id=RUP91494.1;transl_table=11 RBLY01000012.1 Genbank gene 4750 8019 . - . ID=gene-D8M19_10310;Name=D8M19_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10310 RBLY01000012.1 Protein Homology CDS 4750 8019 . - 0 ID=cds-RUP91524.1;Parent=gene-D8M19_10310;Dbxref=NCBI_GP:RUP91524.1;Name=RUP91524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022075.1;locus_tag=D8M19_10310;product=DUF3367 domain-containing protein;protein_id=RUP91524.1;transl_table=11 RBLY01000012.1 Genbank gene 8111 8296 . - . ID=gene-D8M19_10315;Name=D8M19_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10315 RBLY01000012.1 Protein Homology CDS 8111 8296 . - 0 ID=cds-RUP91525.1;Parent=gene-D8M19_10315;Dbxref=NCBI_GP:RUP91525.1;Name=RUP91525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768961.1;locus_tag=D8M19_10315;product=DUF2613 family protein;protein_id=RUP91525.1;transl_table=11 RBLY01000012.1 Genbank gene 8392 8907 . - . ID=gene-D8M19_10320;Name=D8M19_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10320 RBLY01000012.1 Protein Homology CDS 8392 8907 . - 0 ID=cds-RUP91495.1;Parent=gene-D8M19_10320;Dbxref=NCBI_GP:RUP91495.1;Name=RUP91495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120693.1;locus_tag=D8M19_10320;product=universal stress protein;protein_id=RUP91495.1;transl_table=11 RBLY01000012.1 Genbank pseudogene 8925 9416 . + . ID=gene-D8M19_10325;Name=D8M19_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10325;pseudo=true RBLY01000012.1 Protein Homology CDS 8925 9416 . + 0 ID=cds-D8M19_10325;Parent=gene-D8M19_10325;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360876.1;locus_tag=D8M19_10325;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000012.1 Genbank gene 9450 11135 . + . ID=gene-D8M19_10330;Name=D8M19_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10330 RBLY01000012.1 Protein Homology CDS 9450 11135 . + 0 ID=cds-RUP91496.1;Parent=gene-D8M19_10330;Dbxref=NCBI_GP:RUP91496.1;Name=RUP91496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329420.1;locus_tag=D8M19_10330;product=hypothetical protein;protein_id=RUP91496.1;transl_table=11 RBLY01000012.1 Genbank gene 11199 11762 . + . ID=gene-D8M19_10335;Name=D8M19_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10335 RBLY01000012.1 Protein Homology CDS 11199 11762 . + 0 ID=cds-RUP91497.1;Parent=gene-D8M19_10335;Dbxref=NCBI_GP:RUP91497.1;Name=RUP91497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295967.1;locus_tag=D8M19_10335;product=dCTP deaminase;protein_id=RUP91497.1;transl_table=11 RBLY01000012.1 Genbank gene 11803 13197 . + . ID=gene-D8M19_10340;Name=D8M19_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10340 RBLY01000012.1 Protein Homology CDS 11803 13197 . + 0 ID=cds-RUP91498.1;Parent=gene-D8M19_10340;Dbxref=NCBI_GP:RUP91498.1;Name=RUP91498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297154.1;locus_tag=D8M19_10340;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=RUP91498.1;transl_table=11 RBLY01000012.1 Genbank gene 13596 14078 . + . ID=gene-D8M19_10345;Name=D8M19_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10345 RBLY01000012.1 Protein Homology CDS 13596 14078 . + 0 ID=cds-RUP91499.1;Parent=gene-D8M19_10345;Dbxref=NCBI_GP:RUP91499.1;Name=RUP91499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188264.1;locus_tag=D8M19_10345;product=ferritin;protein_id=RUP91499.1;transl_table=11 RBLY01000012.1 Genbank gene 14231 15406 . + . ID=gene-D8M19_10350;Name=D8M19_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10350 RBLY01000012.1 Protein Homology CDS 14231 15406 . + 0 ID=cds-RUP91500.1;Parent=gene-D8M19_10350;Dbxref=NCBI_GP:RUP91500.1;Name=RUP91500.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11806.6;locus_tag=D8M19_10350;product=DUF3327 domain-containing protein;protein_id=RUP91500.1;transl_table=11 RBLY01000012.1 Genbank gene 15390 16112 . - . ID=gene-D8M19_10355;Name=D8M19_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10355 RBLY01000012.1 Protein Homology CDS 15390 16112 . - 0 ID=cds-RUP91501.1;Parent=gene-D8M19_10355;Dbxref=NCBI_GP:RUP91501.1;Name=RUP91501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274157.1;locus_tag=D8M19_10355;product=SDR family oxidoreductase;protein_id=RUP91501.1;transl_table=11 RBLY01000012.1 Genbank gene 16572 19115 . + . ID=gene-D8M19_10360;Name=D8M19_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10360 RBLY01000012.1 GeneMarkS+ CDS 16572 19115 . + 0 ID=cds-RUP91502.1;Parent=gene-D8M19_10360;Dbxref=NCBI_GP:RUP91502.1;Name=RUP91502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10360;product=hypothetical protein;protein_id=RUP91502.1;transl_table=11 RBLY01000012.1 Genbank gene 19367 20371 . + . ID=gene-D8M19_10365;Name=D8M19_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10365 RBLY01000012.1 Protein Homology CDS 19367 20371 . + 0 ID=cds-RUP91503.1;Parent=gene-D8M19_10365;Dbxref=NCBI_GP:RUP91503.1;Name=RUP91503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013863625.1;locus_tag=D8M19_10365;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP91503.1;transl_table=11 RBLY01000012.1 Genbank gene 20422 22782 . + . ID=gene-D8M19_10370;Name=D8M19_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10370 RBLY01000012.1 GeneMarkS+ CDS 20422 22782 . + 0 ID=cds-RUP91504.1;Parent=gene-D8M19_10370;Dbxref=NCBI_GP:RUP91504.1;Name=RUP91504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10370;product=hypothetical protein;protein_id=RUP91504.1;transl_table=11 RBLY01000012.1 Genbank gene 22859 23989 . + . ID=gene-D8M19_10375;Name=D8M19_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10375 RBLY01000012.1 GeneMarkS+ CDS 22859 23989 . + 0 ID=cds-RUP91505.1;Parent=gene-D8M19_10375;Dbxref=NCBI_GP:RUP91505.1;Name=RUP91505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10375;product=hypothetical protein;protein_id=RUP91505.1;transl_table=11 RBLY01000012.1 Genbank gene 24032 25000 . + . ID=gene-D8M19_10380;Name=D8M19_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10380 RBLY01000012.1 Protein Homology CDS 24032 25000 . + 0 ID=cds-RUP91526.1;Parent=gene-D8M19_10380;Dbxref=NCBI_GP:RUP91526.1;Name=RUP91526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120705.1;locus_tag=D8M19_10380;product=iron ABC transporter permease;protein_id=RUP91526.1;transl_table=11 RBLY01000012.1 Genbank gene 25001 26050 . + . ID=gene-D8M19_10385;Name=D8M19_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10385 RBLY01000012.1 Protein Homology CDS 25001 26050 . + 0 ID=cds-RUP91506.1;Parent=gene-D8M19_10385;Dbxref=NCBI_GP:RUP91506.1;Name=RUP91506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120706.1;locus_tag=D8M19_10385;product=Fe(3+)-siderophore ABC transporter permease;protein_id=RUP91506.1;transl_table=11 RBLY01000012.1 Genbank gene 26040 26894 . + . ID=gene-D8M19_10390;Name=D8M19_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10390 RBLY01000012.1 Protein Homology CDS 26040 26894 . + 0 ID=cds-RUP91507.1;Parent=gene-D8M19_10390;Dbxref=NCBI_GP:RUP91507.1;Name=RUP91507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120707.1;locus_tag=D8M19_10390;product=ABC transporter ATP-binding protein;protein_id=RUP91507.1;transl_table=11 RBLY01000012.1 Genbank gene 26897 27553 . + . ID=gene-D8M19_10395;Name=D8M19_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10395 RBLY01000012.1 Protein Homology CDS 26897 27553 . + 0 ID=cds-RUP91508.1;Parent=gene-D8M19_10395;Dbxref=NCBI_GP:RUP91508.1;Name=RUP91508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120708.1;locus_tag=D8M19_10395;product=isochorismatase family protein;protein_id=RUP91508.1;transl_table=11 RBLY01000012.1 Genbank gene 27586 28707 . + . ID=gene-D8M19_10400;Name=D8M19_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10400 RBLY01000012.1 Protein Homology CDS 27586 28707 . + 0 ID=cds-RUP91527.1;Parent=gene-D8M19_10400;Dbxref=NCBI_GP:RUP91527.1;Name=RUP91527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005524097.1;locus_tag=D8M19_10400;product=isochorismate synthase;protein_id=RUP91527.1;transl_table=11 RBLY01000012.1 Genbank gene 28697 30289 . + . ID=gene-D8M19_10405;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=D8M19_10405 RBLY01000012.1 Protein Homology CDS 28697 30289 . + 0 ID=cds-RUP91509.1;Parent=gene-D8M19_10405;Dbxref=NCBI_GP:RUP91509.1;Name=RUP91509.1;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120710.1;locus_tag=D8M19_10405;product=2%2C3-dihydroxybenzoate-AMP ligase;protein_id=RUP91509.1;transl_table=11 RBLY01000012.1 Genbank gene 30195 30596 . + . ID=gene-D8M19_10410;Name=D8M19_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10410 RBLY01000012.1 Protein Homology CDS 30195 30596 . + 0 ID=cds-RUP91510.1;Parent=gene-D8M19_10410;Dbxref=NCBI_GP:RUP91510.1;Name=RUP91510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;locus_tag=D8M19_10410;product=hypothetical protein;protein_id=RUP91510.1;transl_table=11 RBLY01000012.1 Genbank gene 30569 34225 . + . ID=gene-D8M19_10415;Name=D8M19_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10415 RBLY01000012.1 Protein Homology CDS 30569 34225 . + 0 ID=cds-RUP91511.1;Parent=gene-D8M19_10415;Dbxref=NCBI_GP:RUP91511.1;Name=RUP91511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23%2CHMM:PF00668.18;locus_tag=D8M19_10415;product=amino acid adenylation domain-containing protein;protein_id=RUP91511.1;transl_table=11 RBLY01000012.1 Genbank gene 34405 35502 . + . ID=gene-D8M19_10420;Name=D8M19_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10420 RBLY01000012.1 Protein Homology CDS 34405 35502 . + 0 ID=cds-RUP91512.1;Parent=gene-D8M19_10420;Dbxref=NCBI_GP:RUP91512.1;Name=RUP91512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120713.1;locus_tag=D8M19_10420;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=RUP91512.1;transl_table=11 RBLY01000012.1 Genbank pseudogene 35829 36338 . + . ID=gene-D8M19_10425;Name=D8M19_10425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10425;pseudo=true RBLY01000012.1 Protein Homology CDS 35829 36338 . + 0 ID=cds-D8M19_10425;Parent=gene-D8M19_10425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910989.1;locus_tag=D8M19_10425;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000012.1 Genbank pseudogene 36641 37367 . + . ID=gene-D8M19_10430;Name=D8M19_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10430;pseudo=true RBLY01000012.1 Protein Homology CDS 36641 37367 . + 0 ID=cds-D8M19_10430;Parent=gene-D8M19_10430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770343.1;locus_tag=D8M19_10430;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000012.1 Genbank gene 37936 39588 . - . ID=gene-D8M19_10435;Name=D8M19_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10435 RBLY01000012.1 Protein Homology CDS 37936 39588 . - 0 ID=cds-RUP91513.1;Parent=gene-D8M19_10435;Dbxref=NCBI_GP:RUP91513.1;Name=RUP91513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120716.1;locus_tag=D8M19_10435;product=ATPase of the ABC class;protein_id=RUP91513.1;transl_table=11 RBLY01000012.1 Genbank gene 39724 41004 . + . ID=gene-D8M19_10440;Name=D8M19_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10440 RBLY01000012.1 Protein Homology CDS 39724 41004 . + 0 ID=cds-RUP91514.1;Parent=gene-D8M19_10440;Dbxref=NCBI_GP:RUP91514.1;Name=RUP91514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018135274.1;locus_tag=D8M19_10440;product=MFS transporter;protein_id=RUP91514.1;transl_table=11 RBLY01000012.1 Genbank gene 41254 42006 . + . ID=gene-D8M19_10445;Name=D8M19_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10445 RBLY01000012.1 GeneMarkS+ CDS 41254 42006 . + 0 ID=cds-RUP91515.1;Parent=gene-D8M19_10445;Dbxref=NCBI_GP:RUP91515.1;Name=RUP91515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10445;product=hypothetical protein;protein_id=RUP91515.1;transl_table=11 RBLY01000012.1 Genbank gene 42113 42664 . + . ID=gene-D8M19_10450;Name=D8M19_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10450 RBLY01000012.1 GeneMarkS+ CDS 42113 42664 . + 0 ID=cds-RUP91516.1;Parent=gene-D8M19_10450;Dbxref=NCBI_GP:RUP91516.1;Name=RUP91516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10450;product=hypothetical protein;protein_id=RUP91516.1;transl_table=11 RBLY01000012.1 Genbank gene 42648 43883 . - . ID=gene-D8M19_10455;Name=D8M19_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10455 RBLY01000012.1 Protein Homology CDS 42648 43883 . - 0 ID=cds-RUP91517.1;Parent=gene-D8M19_10455;Dbxref=NCBI_GP:RUP91517.1;Name=RUP91517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188626.1;locus_tag=D8M19_10455;product=pyridoxal phosphate-dependent aminotransferase;protein_id=RUP91517.1;transl_table=11 RBLY01000012.1 Genbank gene 43905 44564 . - . ID=gene-D8M19_10460;Name=D8M19_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10460 RBLY01000012.1 Protein Homology CDS 43905 44564 . - 0 ID=cds-RUP91518.1;Parent=gene-D8M19_10460;Dbxref=NCBI_GP:RUP91518.1;Name=RUP91518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08044.9;locus_tag=D8M19_10460;product=DUF1707 domain-containing protein;protein_id=RUP91518.1;transl_table=11 RBLY01000012.1 Genbank gene 44574 45851 . - . ID=gene-D8M19_10465;Name=D8M19_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10465 RBLY01000012.1 Protein Homology CDS 44574 45851 . - 0 ID=cds-RUP91519.1;Parent=gene-D8M19_10465;Dbxref=NCBI_GP:RUP91519.1;Name=RUP91519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=D8M19_10465;product=ATP-binding cassette domain-containing protein;protein_id=RUP91519.1;transl_table=11 RBLY01000012.1 Genbank gene 45842 46582 . - . ID=gene-D8M19_10470;Name=D8M19_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10470 RBLY01000012.1 Protein Homology CDS 45842 46582 . - 0 ID=cds-RUP91520.1;Parent=gene-D8M19_10470;Dbxref=NCBI_GP:RUP91520.1;Name=RUP91520.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02361.14;locus_tag=D8M19_10470;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RUP91520.1;transl_table=11 RBLY01000012.1 Genbank gene 46563 47285 . - . ID=gene-D8M19_10475;Name=D8M19_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10475 RBLY01000012.1 Protein Homology CDS 46563 47285 . - 0 ID=cds-RUP91528.1;Parent=gene-D8M19_10475;Dbxref=NCBI_GP:RUP91528.1;Name=RUP91528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120724.1;locus_tag=D8M19_10475;product=ECF transporter S component;protein_id=RUP91528.1;transl_table=11 RBLY01000012.1 Genbank gene 47583 47891 . - . ID=gene-D8M19_10480;Name=D8M19_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10480 RBLY01000012.1 Protein Homology CDS 47583 47891 . - 0 ID=cds-RUP91521.1;Parent=gene-D8M19_10480;Dbxref=NCBI_GP:RUP91521.1;Name=RUP91521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768571.1;locus_tag=D8M19_10480;product=TM2 domain-containing protein;protein_id=RUP91521.1;transl_table=11 RBLY01000012.1 Genbank gene 48055 48237 . - . ID=gene-D8M19_10485;Name=D8M19_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10485 RBLY01000012.1 Protein Homology CDS 48055 48237 . - 0 ID=cds-RUP91522.1;Parent=gene-D8M19_10485;Dbxref=NCBI_GP:RUP91522.1;Name=RUP91522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09179.9;locus_tag=D8M19_10485;product=hypothetical protein;protein_id=RUP91522.1;transl_table=11 RBLY01000012.1 Genbank gene 48256 49353 . - . ID=gene-D8M19_10490;Name=D8M19_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10490 RBLY01000012.1 Protein Homology CDS 48256 49353 . - 0 ID=cds-RUP91523.1;Parent=gene-D8M19_10490;Dbxref=NCBI_GP:RUP91523.1;Name=RUP91523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120727.1;locus_tag=D8M19_10490;product=nucleoside hydrolase;protein_id=RUP91523.1;transl_table=11 RBLY01000012.1 Genbank pseudogene 49379 50704 . - . ID=gene-D8M19_10495;Name=D8M19_10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10495;pseudo=true RBLY01000012.1 Protein Homology CDS 49379 50704 . - 0 ID=cds-D8M19_10495;Parent=gene-D8M19_10495;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120728.1;locus_tag=D8M19_10495;product=AI-2E family transporter;pseudo=true;transl_table=11 ##sequence-region RBLY01000013.1 1 16010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000013.1 Genbank region 1 16010 . + . ID=RBLY01000013.1:1..16010;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000013.1 Genbank gene 155 1021 . - . ID=gene-D8M19_10500;Name=D8M19_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10500 RBLY01000013.1 Protein Homology CDS 155 1021 . - 0 ID=cds-RUP91474.1;Parent=gene-D8M19_10500;Dbxref=NCBI_GP:RUP91474.1;Name=RUP91474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00950.15;locus_tag=D8M19_10500;product=metal ABC transporter permease;protein_id=RUP91474.1;transl_table=11 RBLY01000013.1 Genbank gene 1018 1890 . - . ID=gene-D8M19_10505;Name=D8M19_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10505 RBLY01000013.1 Protein Homology CDS 1018 1890 . - 0 ID=cds-RUP91475.1;Parent=gene-D8M19_10505;Dbxref=NCBI_GP:RUP91475.1;Name=RUP91475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00950.15;locus_tag=D8M19_10505;product=metal ABC transporter permease;protein_id=RUP91475.1;transl_table=11 RBLY01000013.1 Genbank gene 1887 2678 . - . ID=gene-D8M19_10510;Name=D8M19_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10510 RBLY01000013.1 Protein Homology CDS 1887 2678 . - 0 ID=cds-RUP91476.1;Parent=gene-D8M19_10510;Dbxref=NCBI_GP:RUP91476.1;Name=RUP91476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121620.1;locus_tag=D8M19_10510;product=metal ABC transporter ATP-binding protein;protein_id=RUP91476.1;transl_table=11 RBLY01000013.1 Genbank gene 2811 3773 . - . ID=gene-D8M19_10515;Name=D8M19_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10515 RBLY01000013.1 Protein Homology CDS 2811 3773 . - 0 ID=cds-RUP91477.1;Parent=gene-D8M19_10515;Dbxref=NCBI_GP:RUP91477.1;Name=RUP91477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121618.1;locus_tag=D8M19_10515;product=zinc ABC transporter substrate-binding protein;protein_id=RUP91477.1;transl_table=11 RBLY01000013.1 Genbank gene 3940 4725 . + . ID=gene-D8M19_10520;Name=D8M19_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10520 RBLY01000013.1 Protein Homology CDS 3940 4725 . + 0 ID=cds-RUP91478.1;Parent=gene-D8M19_10520;Dbxref=NCBI_GP:RUP91478.1;Name=RUP91478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121617.1;locus_tag=D8M19_10520;product=metal-dependent transcriptional regulator;protein_id=RUP91478.1;transl_table=11 RBLY01000013.1 Genbank gene 4715 5599 . + . ID=gene-D8M19_10525;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=D8M19_10525 RBLY01000013.1 Protein Homology CDS 4715 5599 . + 0 ID=cds-RUP91479.1;Parent=gene-D8M19_10525;Dbxref=NCBI_GP:RUP91479.1;Name=RUP91479.1;gbkey=CDS;gene=truA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121616.1;locus_tag=D8M19_10525;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=RUP91479.1;transl_table=11 RBLY01000013.1 Genbank gene 5665 7233 . + . ID=gene-D8M19_10530;Name=eccB;gbkey=Gene;gene=eccB;gene_biotype=protein_coding;locus_tag=D8M19_10530 RBLY01000013.1 Protein Homology CDS 5665 7233 . + 0 ID=cds-RUP91480.1;Parent=gene-D8M19_10530;Dbxref=NCBI_GP:RUP91480.1;Name=RUP91480.1;gbkey=CDS;gene=eccB;inference=COORDINATES: protein motif:HMM:PF05108.11;locus_tag=D8M19_10530;product=type VII secretion protein EccB;protein_id=RUP91480.1;transl_table=11 RBLY01000013.1 Genbank gene 7354 8976 . - . ID=gene-D8M19_10535;Name=D8M19_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10535 RBLY01000013.1 Protein Homology CDS 7354 8976 . - 0 ID=cds-RUP91481.1;Parent=gene-D8M19_10535;Dbxref=NCBI_GP:RUP91481.1;Name=RUP91481.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00082.20;locus_tag=D8M19_10535;product=hypothetical protein;protein_id=RUP91481.1;transl_table=11 RBLY01000013.1 Genbank gene 8916 10310 . - . ID=gene-D8M19_10540;Name=eccD;gbkey=Gene;gene=eccD;gene_biotype=protein_coding;locus_tag=D8M19_10540 RBLY01000013.1 Protein Homology CDS 8916 10310 . - 0 ID=cds-RUP91482.1;Parent=gene-D8M19_10540;Dbxref=NCBI_GP:RUP91482.1;Name=RUP91482.1;gbkey=CDS;gene=eccD;inference=COORDINATES: protein motif:HMM:TIGR03920;locus_tag=D8M19_10540;product=type VII secretion integral membrane protein EccD;protein_id=RUP91482.1;transl_table=11 RBLY01000013.1 Genbank pseudogene 10461 14453 . + . ID=gene-D8M19_10545;Name=eccCa;gbkey=Gene;gene=eccCa;gene_biotype=pseudogene;locus_tag=D8M19_10545;pseudo=true RBLY01000013.1 Protein Homology CDS 10461 14453 . + 0 ID=cds-D8M19_10545;Parent=gene-D8M19_10545;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=eccCa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121612.1;locus_tag=D8M19_10545;product=type VII secretion protein EccCa;pseudo=true;transl_table=11 RBLY01000013.1 Genbank gene 14555 15754 . + . ID=gene-D8M19_10550;Name=D8M19_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10550 RBLY01000013.1 Protein Homology CDS 14555 15754 . + 0 ID=cds-RUP91483.1;Parent=gene-D8M19_10550;Dbxref=NCBI_GP:RUP91483.1;Name=RUP91483.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03931;locus_tag=D8M19_10550;product=type VII secretion-associated protein;protein_id=RUP91483.1;transl_table=11 RBLY01000013.1 Genbank gene 15919 16010 . - . ID=gene-D8M19_10555;Name=D8M19_10555;end_range=16010,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10555;partial=true RBLY01000013.1 Protein Homology CDS 15919 16010 . - 2 ID=cds-RUP91484.1;Parent=gene-D8M19_10555;Dbxref=NCBI_GP:RUP91484.1;Name=RUP91484.1;end_range=16010,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M19_10555;partial=true;product=hypothetical protein;protein_id=RUP91484.1;transl_table=11 ##sequence-region RBLY01000014.1 1 5581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000014.1 Genbank region 1 5581 . + . ID=RBLY01000014.1:1..5581;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000014.1 Genbank gene 370 1894 . + . ID=gene-D8M19_10560;Name=D8M19_10560;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M19_10560 RBLY01000014.1 Genbank rRNA 370 1894 . + . ID=rna-D8M19_10560;Parent=gene-D8M19_10560;gbkey=rRNA;locus_tag=D8M19_10560;product=16S ribosomal RNA RBLY01000014.1 Genbank exon 370 1894 . + . ID=exon-D8M19_10560-1;Parent=rna-D8M19_10560;gbkey=rRNA;locus_tag=D8M19_10560;product=16S ribosomal RNA RBLY01000014.1 Genbank gene 2263 5322 . + . ID=gene-D8M19_10565;Name=D8M19_10565;gbkey=Gene;gene_biotype=rRNA;locus_tag=D8M19_10565 RBLY01000014.1 Genbank rRNA 2263 5322 . + . ID=rna-D8M19_10565;Parent=gene-D8M19_10565;gbkey=rRNA;locus_tag=D8M19_10565;product=23S ribosomal RNA RBLY01000014.1 Genbank exon 2263 5322 . + . ID=exon-D8M19_10565-1;Parent=rna-D8M19_10565;gbkey=rRNA;locus_tag=D8M19_10565;product=23S ribosomal RNA RBLY01000014.1 Genbank gene 5458 5576 . + . ID=gene-D8M19_10570;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M19_10570 RBLY01000014.1 cmsearch rRNA 5458 5576 . + . ID=rna-D8M19_10570;Parent=gene-D8M19_10570;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_10570;product=5S ribosomal RNA RBLY01000014.1 cmsearch exon 5458 5576 . + . ID=exon-D8M19_10570-1;Parent=rna-D8M19_10570;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_10570;product=5S ribosomal RNA ##sequence-region RBLY01000015.1 1 1687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000015.1 Genbank region 1 1687 . + . ID=RBLY01000015.1:1..1687;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000015.1 Genbank gene 93 1586 . - . ID=gene-D8M19_10575;Name=D8M19_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10575 RBLY01000015.1 Protein Homology CDS 93 1586 . - 0 ID=cds-RUP91470.1;Parent=gene-D8M19_10575;Dbxref=NCBI_GP:RUP91470.1;Name=RUP91470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280351.1;locus_tag=D8M19_10575;product=transposase;protein_id=RUP91470.1;transl_table=11 ##sequence-region RBLY01000016.1 1 1438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000016.1 Genbank region 1 1438 . + . ID=RBLY01000016.1:1..1438;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000016.1 Genbank pseudogene 35 1250 . - . ID=gene-D8M19_10580;Name=D8M19_10580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10580;pseudo=true RBLY01000016.1 Protein Homology CDS 35 1250 . - 0 ID=cds-D8M19_10580;Parent=gene-D8M19_10580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M19_10580;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region RBLY01000017.1 1 1426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000017.1 Genbank region 1 1426 . + . ID=RBLY01000017.1:1..1426;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000017.1 Genbank gene 177 1426 . + . ID=gene-D8M19_10585;Name=D8M19_10585;end_range=1426,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10585;partial=true RBLY01000017.1 Protein Homology CDS 177 1426 . + 0 ID=cds-RUP91468.1;Parent=gene-D8M19_10585;Dbxref=NCBI_GP:RUP91468.1;Name=RUP91468.1;end_range=1426,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033577.2;locus_tag=D8M19_10585;partial=true;product=IS481 family transposase;protein_id=RUP91468.1;transl_table=11 ##sequence-region RBLY01000018.1 1 1076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000018.1 Genbank region 1 1076 . + . ID=RBLY01000018.1:1..1076;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000018.1 Genbank gene 1 455 . - . ID=gene-D8M19_10590;Name=D8M19_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10590;partial=true;start_range=.,1 RBLY01000018.1 Protein Homology CDS 1 455 . - 0 ID=cds-RUP91465.1;Parent=gene-D8M19_10590;Dbxref=NCBI_GP:RUP91465.1;Name=RUP91465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335911.1;locus_tag=D8M19_10590;partial=true;product=pyridoxal-phosphate dependent enzyme;protein_id=RUP91465.1;start_range=.,1;transl_table=11 RBLY01000018.1 Genbank gene 520 1076 . + . ID=gene-D8M19_10595;Name=D8M19_10595;end_range=1076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10595;partial=true RBLY01000018.1 Protein Homology CDS 520 1076 . + 0 ID=cds-RUP91466.1;Parent=gene-D8M19_10595;Dbxref=NCBI_GP:RUP91466.1;Name=RUP91466.1;end_range=1076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_233147.1;locus_tag=D8M19_10595;partial=true;product=LysR family transcriptional regulator;protein_id=RUP91466.1;transl_table=11 ##sequence-region RBLY01000019.1 1 960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000019.1 Genbank region 1 960 . + . ID=RBLY01000019.1:1..960;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000019.1 Genbank gene 1 358 . + . ID=gene-D8M19_10600;Name=D8M19_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10600;partial=true;start_range=.,1 RBLY01000019.1 Protein Homology CDS 1 358 . + 1 ID=cds-RUP91462.1;Parent=gene-D8M19_10600;Dbxref=NCBI_GP:RUP91462.1;Name=RUP91462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010080272.1;locus_tag=D8M19_10600;partial=true;product=multicopper oxidase family protein;protein_id=RUP91462.1;start_range=.,1;transl_table=11 RBLY01000019.1 Genbank gene 580 879 . + . ID=gene-D8M19_10605;Name=D8M19_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10605 RBLY01000019.1 Protein Homology CDS 580 879 . + 0 ID=cds-RUP91463.1;Parent=gene-D8M19_10605;Dbxref=NCBI_GP:RUP91463.1;Name=RUP91463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=D8M19_10605;product=hypothetical protein;protein_id=RUP91463.1;transl_table=11 ##sequence-region RBLY01000001.1 1 397992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000001.1 Genbank region 1 397992 . + . ID=RBLY01000001.1:1..397992;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000001.1 Genbank gene 254 1075 . + . ID=gene-D8M19_00005;Name=D8M19_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00005 RBLY01000001.1 Protein Homology CDS 254 1075 . + 0 ID=cds-RUP96039.1;Parent=gene-D8M19_00005;Dbxref=NCBI_GP:RUP96039.1;Name=RUP96039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121162.1;locus_tag=D8M19_00005;product=sulfite exporter TauE/SafE family protein;protein_id=RUP96039.1;transl_table=11 RBLY01000001.1 Genbank gene 1097 1747 . - . ID=gene-D8M19_00010;Name=D8M19_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00010 RBLY01000001.1 Protein Homology CDS 1097 1747 . - 0 ID=cds-RUP96339.1;Parent=gene-D8M19_00010;Dbxref=NCBI_GP:RUP96339.1;Name=RUP96339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822935.1;locus_tag=D8M19_00010;product=DUF3239 domain-containing protein;protein_id=RUP96339.1;transl_table=11 RBLY01000001.1 Genbank gene 1859 3529 . - . ID=gene-D8M19_00015;Name=D8M19_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00015 RBLY01000001.1 Protein Homology CDS 1859 3529 . - 0 ID=cds-RUP96340.1;Parent=gene-D8M19_00015;Dbxref=NCBI_GP:RUP96340.1;Name=RUP96340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014316532.1;locus_tag=D8M19_00015;product=helicase;protein_id=RUP96340.1;transl_table=11 RBLY01000001.1 Genbank gene 3927 6584 . - . ID=gene-D8M19_00020;Name=D8M19_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00020 RBLY01000001.1 Protein Homology CDS 3927 6584 . - 0 ID=cds-RUP96040.1;Parent=gene-D8M19_00020;Dbxref=NCBI_GP:RUP96040.1;Name=RUP96040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13625.4;locus_tag=D8M19_00020;product=hypothetical protein;protein_id=RUP96040.1;transl_table=11 RBLY01000001.1 Genbank gene 6665 6847 . + . ID=gene-D8M19_00025;Name=D8M19_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00025 RBLY01000001.1 Protein Homology CDS 6665 6847 . + 0 ID=cds-RUP96041.1;Parent=gene-D8M19_00025;Dbxref=NCBI_GP:RUP96041.1;Name=RUP96041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121166.1;locus_tag=D8M19_00025;product=hypothetical protein;protein_id=RUP96041.1;transl_table=11 RBLY01000001.1 Genbank gene 7035 7706 . - . ID=gene-D8M19_00030;Name=D8M19_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00030 RBLY01000001.1 Protein Homology CDS 7035 7706 . - 0 ID=cds-RUP96042.1;Parent=gene-D8M19_00030;Dbxref=NCBI_GP:RUP96042.1;Name=RUP96042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121167.1;locus_tag=D8M19_00030;product=DUF3235 domain-containing protein;protein_id=RUP96042.1;transl_table=11 RBLY01000001.1 Genbank gene 8234 8617 . + . ID=gene-D8M19_00035;Name=D8M19_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00035 RBLY01000001.1 Protein Homology CDS 8234 8617 . + 0 ID=cds-RUP96341.1;Parent=gene-D8M19_00035;Dbxref=NCBI_GP:RUP96341.1;Name=RUP96341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187767.1;locus_tag=D8M19_00035;product=cold-shock protein;protein_id=RUP96341.1;transl_table=11 RBLY01000001.1 Genbank gene 8631 9170 . - . ID=gene-D8M19_00040;Name=D8M19_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00040 RBLY01000001.1 Protein Homology CDS 8631 9170 . - 0 ID=cds-RUP96043.1;Parent=gene-D8M19_00040;Dbxref=NCBI_GP:RUP96043.1;Name=RUP96043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121169.1;locus_tag=D8M19_00040;product=DUF2771 domain-containing protein;protein_id=RUP96043.1;transl_table=11 RBLY01000001.1 Genbank gene 9187 10161 . - . ID=gene-D8M19_00045;Name=D8M19_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00045 RBLY01000001.1 Protein Homology CDS 9187 10161 . - 0 ID=cds-RUP96044.1;Parent=gene-D8M19_00045;Dbxref=NCBI_GP:RUP96044.1;Name=RUP96044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770141.1;locus_tag=D8M19_00045;product=glutaminyl-peptide cyclotransferase;protein_id=RUP96044.1;transl_table=11 RBLY01000001.1 Genbank gene 10284 11762 . + . ID=gene-D8M19_00050;Name=D8M19_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00050 RBLY01000001.1 Protein Homology CDS 10284 11762 . + 0 ID=cds-RUP96045.1;Parent=gene-D8M19_00050;Dbxref=NCBI_GP:RUP96045.1;Name=RUP96045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061420.1;locus_tag=D8M19_00050;product=NCS2 family permease;protein_id=RUP96045.1;transl_table=11 RBLY01000001.1 Genbank gene 11811 12746 . + . ID=gene-D8M19_00055;Name=D8M19_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00055 RBLY01000001.1 Protein Homology CDS 11811 12746 . + 0 ID=cds-RUP96046.1;Parent=gene-D8M19_00055;Dbxref=NCBI_GP:RUP96046.1;Name=RUP96046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600967.1;locus_tag=D8M19_00055;product=RNA methyltransferase;protein_id=RUP96046.1;transl_table=11 RBLY01000001.1 Genbank gene 12761 13726 . - . ID=gene-D8M19_00060;Name=D8M19_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00060 RBLY01000001.1 Protein Homology CDS 12761 13726 . - 0 ID=cds-RUP96047.1;Parent=gene-D8M19_00060;Dbxref=NCBI_GP:RUP96047.1;Name=RUP96047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121173.1;locus_tag=D8M19_00060;product=hypothetical protein;protein_id=RUP96047.1;transl_table=11 RBLY01000001.1 Genbank gene 13775 15196 . - . ID=gene-D8M19_00065;Name=D8M19_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00065 RBLY01000001.1 Protein Homology CDS 13775 15196 . - 0 ID=cds-RUP96048.1;Parent=gene-D8M19_00065;Dbxref=NCBI_GP:RUP96048.1;Name=RUP96048.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11268.6;locus_tag=D8M19_00065;product=DUF3071 domain-containing protein;protein_id=RUP96048.1;transl_table=11 RBLY01000001.1 Genbank gene 15233 16366 . - . ID=gene-D8M19_00070;Name=D8M19_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00070 RBLY01000001.1 Protein Homology CDS 15233 16366 . - 0 ID=cds-RUP96049.1;Parent=gene-D8M19_00070;Dbxref=NCBI_GP:RUP96049.1;Name=RUP96049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121175.1;locus_tag=D8M19_00070;product=phosphoserine transaminase;protein_id=RUP96049.1;transl_table=11 RBLY01000001.1 Genbank gene 16639 17934 . + . ID=gene-D8M19_00075;Name=D8M19_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00075 RBLY01000001.1 Protein Homology CDS 16639 17934 . + 0 ID=cds-RUP96342.1;Parent=gene-D8M19_00075;Dbxref=NCBI_GP:RUP96342.1;Name=RUP96342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013911031.1;locus_tag=D8M19_00075;product=citrate synthase;protein_id=RUP96342.1;transl_table=11 RBLY01000001.1 Genbank gene 18134 18502 . + . ID=gene-D8M19_00080;Name=D8M19_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00080 RBLY01000001.1 Protein Homology CDS 18134 18502 . + 0 ID=cds-RUP96050.1;Parent=gene-D8M19_00080;Dbxref=NCBI_GP:RUP96050.1;Name=RUP96050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121177.1;locus_tag=D8M19_00080;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=RUP96050.1;transl_table=11 RBLY01000001.1 Genbank gene 18574 19446 . + . ID=gene-D8M19_00085;Name=D8M19_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00085 RBLY01000001.1 Protein Homology CDS 18574 19446 . + 0 ID=cds-RUP96343.1;Parent=gene-D8M19_00085;Dbxref=NCBI_GP:RUP96343.1;Name=RUP96343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121178.1;locus_tag=D8M19_00085;product=aldo/keto reductase;protein_id=RUP96343.1;transl_table=11 RBLY01000001.1 Genbank gene 19905 20186 . + . ID=gene-D8M19_00090;Name=D8M19_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00090 RBLY01000001.1 Protein Homology CDS 19905 20186 . + 0 ID=cds-RUP96344.1;Parent=gene-D8M19_00090;Dbxref=NCBI_GP:RUP96344.1;Name=RUP96344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121179.1;locus_tag=D8M19_00090;product=DUF485 domain-containing protein;protein_id=RUP96344.1;transl_table=11 RBLY01000001.1 Genbank gene 20226 21878 . + . ID=gene-D8M19_00095;Name=D8M19_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00095 RBLY01000001.1 Protein Homology CDS 20226 21878 . + 0 ID=cds-RUP96345.1;Parent=gene-D8M19_00095;Dbxref=NCBI_GP:RUP96345.1;Name=RUP96345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014800184.1;locus_tag=D8M19_00095;product=amino acid permease;protein_id=RUP96345.1;transl_table=11 RBLY01000001.1 Genbank gene 22161 22982 . + . ID=gene-D8M19_00100;Name=D8M19_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00100 RBLY01000001.1 Protein Homology CDS 22161 22982 . + 0 ID=cds-RUP96346.1;Parent=gene-D8M19_00100;Dbxref=NCBI_GP:RUP96346.1;Name=RUP96346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121181.1;locus_tag=D8M19_00100;product=hypothetical protein;protein_id=RUP96346.1;transl_table=11 RBLY01000001.1 Genbank gene 23029 24027 . - . ID=gene-D8M19_00105;Name=D8M19_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00105 RBLY01000001.1 Protein Homology CDS 23029 24027 . - 0 ID=cds-RUP96051.1;Parent=gene-D8M19_00105;Dbxref=NCBI_GP:RUP96051.1;Name=RUP96051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121185.1;locus_tag=D8M19_00105;product=DUF1906 domain-containing protein;protein_id=RUP96051.1;transl_table=11 RBLY01000001.1 Genbank gene 24339 24411 . - . ID=gene-D8M19_00110;Name=D8M19_00110;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_00110 RBLY01000001.1 tRNAscan-SE tRNA 24339 24411 . - . ID=rna-D8M19_00110;Parent=gene-D8M19_00110;anticodon=(pos:complement(24376..24378));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_00110;product=tRNA-Arg RBLY01000001.1 tRNAscan-SE exon 24339 24411 . - . ID=exon-D8M19_00110-1;Parent=rna-D8M19_00110;anticodon=(pos:complement(24376..24378));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_00110;product=tRNA-Arg RBLY01000001.1 Genbank gene 24525 24812 . - . ID=gene-D8M19_00115;Name=D8M19_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00115 RBLY01000001.1 Protein Homology CDS 24525 24812 . - 0 ID=cds-RUP96052.1;Parent=gene-D8M19_00115;Dbxref=NCBI_GP:RUP96052.1;Name=RUP96052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121186.1;locus_tag=D8M19_00115;product=NrdH-redoxin;protein_id=RUP96052.1;transl_table=11 RBLY01000001.1 Genbank gene 24813 25352 . - . ID=gene-D8M19_00120;Name=D8M19_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00120 RBLY01000001.1 Protein Homology CDS 24813 25352 . - 0 ID=cds-RUP96347.1;Parent=gene-D8M19_00120;Dbxref=NCBI_GP:RUP96347.1;Name=RUP96347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187686.1;locus_tag=D8M19_00120;product=dihydrofolate reductase;protein_id=RUP96347.1;transl_table=11 RBLY01000001.1 Genbank gene 25358 26224 . - . ID=gene-D8M19_00125;Name=D8M19_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00125 RBLY01000001.1 Protein Homology CDS 25358 26224 . - 0 ID=cds-RUP96053.1;Parent=gene-D8M19_00125;Dbxref=NCBI_GP:RUP96053.1;Name=RUP96053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121188.1;locus_tag=D8M19_00125;product=thymidylate synthase;protein_id=RUP96053.1;transl_table=11 RBLY01000001.1 Genbank gene 26346 27104 . - . ID=gene-D8M19_00130;Name=D8M19_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00130 RBLY01000001.1 Protein Homology CDS 26346 27104 . - 0 ID=cds-RUP96054.1;Parent=gene-D8M19_00130;Dbxref=NCBI_GP:RUP96054.1;Name=RUP96054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121189.1;locus_tag=D8M19_00130;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=RUP96054.1;transl_table=11 RBLY01000001.1 Genbank gene 27135 31970 . + . ID=gene-D8M19_00135;Name=D8M19_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00135 RBLY01000001.1 Protein Homology CDS 27135 31970 . + 0 ID=cds-RUP96055.1;Parent=gene-D8M19_00135;Dbxref=NCBI_GP:RUP96055.1;Name=RUP96055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021962.1;locus_tag=D8M19_00135;product=DEAD/DEAH box helicase;protein_id=RUP96055.1;transl_table=11 RBLY01000001.1 Genbank gene 32103 32999 . + . ID=gene-D8M19_00140;Name=D8M19_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00140 RBLY01000001.1 Protein Homology CDS 32103 32999 . + 0 ID=cds-RUP96056.1;Parent=gene-D8M19_00140;Dbxref=NCBI_GP:RUP96056.1;Name=RUP96056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846491.1;locus_tag=D8M19_00140;product=Fpg/Nei family DNA glycosylase;protein_id=RUP96056.1;transl_table=11 RBLY01000001.1 Genbank gene 32996 34729 . - . ID=gene-D8M19_00145;Name=D8M19_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00145 RBLY01000001.1 Protein Homology CDS 32996 34729 . - 0 ID=cds-RUP96057.1;Parent=gene-D8M19_00145;Dbxref=NCBI_GP:RUP96057.1;Name=RUP96057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121191.1;locus_tag=D8M19_00145;product=glucose-6-phosphate isomerase;protein_id=RUP96057.1;transl_table=11 RBLY01000001.1 Genbank gene 34663 35775 . - . ID=gene-D8M19_00150;Name=D8M19_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00150 RBLY01000001.1 Protein Homology CDS 34663 35775 . - 0 ID=cds-RUP96058.1;Parent=gene-D8M19_00150;Dbxref=NCBI_GP:RUP96058.1;Name=RUP96058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01297;locus_tag=D8M19_00150;product=cation transporter;protein_id=RUP96058.1;transl_table=11 RBLY01000001.1 Genbank gene 35859 37844 . - . ID=gene-D8M19_00155;Name=D8M19_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00155 RBLY01000001.1 Protein Homology CDS 35859 37844 . - 0 ID=cds-RUP96348.1;Parent=gene-D8M19_00155;Dbxref=NCBI_GP:RUP96348.1;Name=RUP96348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121193.1;locus_tag=D8M19_00155;product=hypothetical protein;protein_id=RUP96348.1;transl_table=11 RBLY01000001.1 Genbank gene 38285 38812 . - . ID=gene-D8M19_00160;Name=D8M19_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00160 RBLY01000001.1 Protein Homology CDS 38285 38812 . - 0 ID=cds-RUP96059.1;Parent=gene-D8M19_00160;Dbxref=NCBI_GP:RUP96059.1;Name=RUP96059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121194.1;locus_tag=D8M19_00160;product=flavin reductase;protein_id=RUP96059.1;transl_table=11 RBLY01000001.1 Genbank gene 38816 39868 . - . ID=gene-D8M19_00165;Name=D8M19_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00165 RBLY01000001.1 Protein Homology CDS 38816 39868 . - 0 ID=cds-RUP96060.1;Parent=gene-D8M19_00165;Dbxref=NCBI_GP:RUP96060.1;Name=RUP96060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121195.1;locus_tag=D8M19_00165;product=acyl-CoA dehydrogenase;protein_id=RUP96060.1;transl_table=11 RBLY01000001.1 Genbank gene 39949 40494 . - . ID=gene-D8M19_00170;Name=D8M19_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00170 RBLY01000001.1 Protein Homology CDS 39949 40494 . - 0 ID=cds-RUP96061.1;Parent=gene-D8M19_00170;Dbxref=NCBI_GP:RUP96061.1;Name=RUP96061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018402.1;locus_tag=D8M19_00170;product=OsmC family peroxiredoxin;protein_id=RUP96061.1;transl_table=11 RBLY01000001.1 Genbank gene 40807 41112 . - . ID=gene-D8M19_00175;Name=D8M19_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00175 RBLY01000001.1 Protein Homology CDS 40807 41112 . - 0 ID=cds-RUP96349.1;Parent=gene-D8M19_00175;Dbxref=NCBI_GP:RUP96349.1;Name=RUP96349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241498.1;locus_tag=D8M19_00175;product=chorismate mutase;protein_id=RUP96349.1;transl_table=11 RBLY01000001.1 Genbank gene 41200 43740 . + . ID=gene-D8M19_00180;Name=D8M19_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00180 RBLY01000001.1 Protein Homology CDS 41200 43740 . + 0 ID=cds-RUP96062.1;Parent=gene-D8M19_00180;Dbxref=NCBI_GP:RUP96062.1;Name=RUP96062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323803.1;locus_tag=D8M19_00180;product=ATP-dependent DNA helicase PcrA;protein_id=RUP96062.1;transl_table=11 RBLY01000001.1 Genbank gene 43746 44528 . - . ID=gene-D8M19_00185;Name=D8M19_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00185 RBLY01000001.1 Protein Homology CDS 43746 44528 . - 0 ID=cds-RUP96063.1;Parent=gene-D8M19_00185;Dbxref=NCBI_GP:RUP96063.1;Name=RUP96063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121199.1;locus_tag=D8M19_00185;product=M23 family metallopeptidase;protein_id=RUP96063.1;transl_table=11 RBLY01000001.1 Genbank gene 44925 45677 . - . ID=gene-D8M19_00190;Name=D8M19_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00190 RBLY01000001.1 Protein Homology CDS 44925 45677 . - 0 ID=cds-RUP96064.1;Parent=gene-D8M19_00190;Dbxref=NCBI_GP:RUP96064.1;Name=RUP96064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187647.1;locus_tag=D8M19_00190;product=M23 family metallopeptidase;protein_id=RUP96064.1;transl_table=11 RBLY01000001.1 Genbank gene 46302 47747 . + . ID=gene-D8M19_00195;Name=D8M19_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00195 RBLY01000001.1 GeneMarkS+ CDS 46302 47747 . + 0 ID=cds-RUP96065.1;Parent=gene-D8M19_00195;Dbxref=NCBI_GP:RUP96065.1;Name=RUP96065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00195;product=hypothetical protein;protein_id=RUP96065.1;transl_table=11 RBLY01000001.1 Genbank gene 47759 48343 . + . ID=gene-D8M19_00200;Name=D8M19_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00200 RBLY01000001.1 Protein Homology CDS 47759 48343 . + 0 ID=cds-RUP96066.1;Parent=gene-D8M19_00200;Dbxref=NCBI_GP:RUP96066.1;Name=RUP96066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121202.1;locus_tag=D8M19_00200;product=phosphoribosylglycinamide formyltransferase;protein_id=RUP96066.1;transl_table=11 RBLY01000001.1 Genbank gene 48478 50142 . + . ID=gene-D8M19_00205;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=D8M19_00205 RBLY01000001.1 Protein Homology CDS 48478 50142 . + 0 ID=cds-RUP96067.1;Parent=gene-D8M19_00205;Dbxref=NCBI_GP:RUP96067.1;Name=RUP96067.1;gbkey=CDS;gene=purH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005510025.1;locus_tag=D8M19_00205;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH;protein_id=RUP96067.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 50282 51194 . - . ID=gene-D8M19_00210;Name=D8M19_00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_00210;pseudo=true RBLY01000001.1 Protein Homology CDS 50282 51194 . - 0 ID=cds-D8M19_00210;Parent=gene-D8M19_00210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121206.1;locus_tag=D8M19_00210;product=alpha/beta hydrolase;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 51301 52701 . - . ID=gene-D8M19_00215;Name=D8M19_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00215 RBLY01000001.1 Protein Homology CDS 51301 52701 . - 0 ID=cds-RUP96068.1;Parent=gene-D8M19_00215;Dbxref=NCBI_GP:RUP96068.1;Name=RUP96068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839746.1;locus_tag=D8M19_00215;product=cytochrome b/b6 domain-containing protein;protein_id=RUP96068.1;transl_table=11 RBLY01000001.1 Genbank gene 52705 53676 . - . ID=gene-D8M19_00220;Name=D8M19_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00220 RBLY01000001.1 Protein Homology CDS 52705 53676 . - 0 ID=cds-RUP96069.1;Parent=gene-D8M19_00220;Dbxref=NCBI_GP:RUP96069.1;Name=RUP96069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00766.17;locus_tag=D8M19_00220;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=RUP96069.1;transl_table=11 RBLY01000001.1 Genbank gene 53685 54506 . - . ID=gene-D8M19_00225;Name=D8M19_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00225 RBLY01000001.1 Protein Homology CDS 53685 54506 . - 0 ID=cds-RUP96070.1;Parent=gene-D8M19_00225;Dbxref=NCBI_GP:RUP96070.1;Name=RUP96070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017204156.1;locus_tag=D8M19_00225;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=RUP96070.1;transl_table=11 RBLY01000001.1 Genbank gene 54631 55299 . - . ID=gene-D8M19_00230;Name=D8M19_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00230 RBLY01000001.1 Protein Homology CDS 54631 55299 . - 0 ID=cds-RUP96071.1;Parent=gene-D8M19_00230;Dbxref=NCBI_GP:RUP96071.1;Name=RUP96071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121211.1;locus_tag=D8M19_00230;product=TetR/AcrR family transcriptional regulator;protein_id=RUP96071.1;transl_table=11 RBLY01000001.1 Genbank gene 55522 55776 . - . ID=gene-D8M19_00235;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=D8M19_00235 RBLY01000001.1 Protein Homology CDS 55522 55776 . - 0 ID=cds-RUP96072.1;Parent=gene-D8M19_00235;Dbxref=NCBI_GP:RUP96072.1;Name=RUP96072.1;gbkey=CDS;gene=rpsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279904.1;locus_tag=D8M19_00235;product=30S ribosomal protein S18;protein_id=RUP96072.1;transl_table=11 RBLY01000001.1 Genbank gene 55792 56097 . - . ID=gene-D8M19_00240;Name=D8M19_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00240 RBLY01000001.1 Protein Homology CDS 55792 56097 . - 0 ID=cds-RUP96073.1;Parent=gene-D8M19_00240;Dbxref=NCBI_GP:RUP96073.1;Name=RUP96073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297576.1;locus_tag=D8M19_00240;product=30S ribosomal protein S14;protein_id=RUP96073.1;transl_table=11 RBLY01000001.1 Genbank gene 56100 56264 . - . ID=gene-D8M19_00245;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=D8M19_00245 RBLY01000001.1 Protein Homology CDS 56100 56264 . - 0 ID=cds-RUP96074.1;Parent=gene-D8M19_00245;Dbxref=NCBI_GP:RUP96074.1;Name=RUP96074.1;gbkey=CDS;gene=rpmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279910.1;locus_tag=D8M19_00245;product=50S ribosomal protein L33;protein_id=RUP96074.1;transl_table=11 RBLY01000001.1 Genbank gene 56267 56503 . - . ID=gene-D8M19_00250;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=D8M19_00250 RBLY01000001.1 Protein Homology CDS 56267 56503 . - 0 ID=cds-RUP96075.1;Parent=gene-D8M19_00250;Dbxref=NCBI_GP:RUP96075.1;Name=RUP96075.1;gbkey=CDS;gene=rpmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400296.1;locus_tag=D8M19_00250;product=50S ribosomal protein L28;protein_id=RUP96075.1;transl_table=11 RBLY01000001.1 Genbank gene 56884 57147 . + . ID=gene-D8M19_00255;Name=D8M19_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00255 RBLY01000001.1 Protein Homology CDS 56884 57147 . + 0 ID=cds-RUP96076.1;Parent=gene-D8M19_00255;Dbxref=NCBI_GP:RUP96076.1;Name=RUP96076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323793.1;locus_tag=D8M19_00255;product=type B 50S ribosomal protein L31;protein_id=RUP96076.1;transl_table=11 RBLY01000001.1 Genbank gene 57167 57340 . + . ID=gene-D8M19_00260;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=D8M19_00260 RBLY01000001.1 Protein Homology CDS 57167 57340 . + 0 ID=cds-RUP96077.1;Parent=gene-D8M19_00260;Dbxref=NCBI_GP:RUP96077.1;Name=RUP96077.1;gbkey=CDS;gene=rpmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530148.1;locus_tag=D8M19_00260;product=50S ribosomal protein L32;protein_id=RUP96077.1;transl_table=11 RBLY01000001.1 Genbank gene 57607 58989 . + . ID=gene-D8M19_00265;Name=D8M19_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00265 RBLY01000001.1 Protein Homology CDS 57607 58989 . + 0 ID=cds-RUP96078.1;Parent=gene-D8M19_00265;Dbxref=NCBI_GP:RUP96078.1;Name=RUP96078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121218.1;locus_tag=D8M19_00265;product=PDZ domain-containing protein;protein_id=RUP96078.1;transl_table=11 RBLY01000001.1 Genbank gene 59043 59636 . + . ID=gene-D8M19_00270;Name=D8M19_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00270 RBLY01000001.1 Protein Homology CDS 59043 59636 . + 0 ID=cds-RUP96079.1;Parent=gene-D8M19_00270;Dbxref=NCBI_GP:RUP96079.1;Name=RUP96079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121219.1;locus_tag=D8M19_00270;product=molybdenum cofactor biosynthesis protein;protein_id=RUP96079.1;transl_table=11 RBLY01000001.1 Genbank gene 59719 59958 . + . ID=gene-D8M19_00275;Name=D8M19_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00275 RBLY01000001.1 GeneMarkS+ CDS 59719 59958 . + 0 ID=cds-RUP96080.1;Parent=gene-D8M19_00275;Dbxref=NCBI_GP:RUP96080.1;Name=RUP96080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00275;product=hypothetical protein;protein_id=RUP96080.1;transl_table=11 RBLY01000001.1 Genbank gene 59952 60413 . - . ID=gene-D8M19_00280;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=D8M19_00280 RBLY01000001.1 Protein Homology CDS 59952 60413 . - 0 ID=cds-RUP96081.1;Parent=gene-D8M19_00280;Dbxref=NCBI_GP:RUP96081.1;Name=RUP96081.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770082.1;locus_tag=D8M19_00280;product=large conductance mechanosensitive channel protein MscL;protein_id=RUP96081.1;transl_table=11 RBLY01000001.1 Genbank gene 60451 61293 . - . ID=gene-D8M19_00285;Name=D8M19_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00285 RBLY01000001.1 Protein Homology CDS 60451 61293 . - 0 ID=cds-RUP96082.1;Parent=gene-D8M19_00285;Dbxref=NCBI_GP:RUP96082.1;Name=RUP96082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08666.10;locus_tag=D8M19_00285;product=hypothetical protein;protein_id=RUP96082.1;transl_table=11 RBLY01000001.1 Genbank gene 61346 62086 . - . ID=gene-D8M19_00290;Name=D8M19_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00290 RBLY01000001.1 Protein Homology CDS 61346 62086 . - 0 ID=cds-RUP96083.1;Parent=gene-D8M19_00290;Dbxref=NCBI_GP:RUP96083.1;Name=RUP96083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01812.18;locus_tag=D8M19_00290;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=RUP96083.1;transl_table=11 RBLY01000001.1 Genbank gene 62085 63056 . + . ID=gene-D8M19_00295;Name=D8M19_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00295 RBLY01000001.1 Protein Homology CDS 62085 63056 . + 0 ID=cds-RUP96084.1;Parent=gene-D8M19_00295;Dbxref=NCBI_GP:RUP96084.1;Name=RUP96084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121224.1;locus_tag=D8M19_00295;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=RUP96084.1;transl_table=11 RBLY01000001.1 Genbank gene 63094 64398 . + . ID=gene-D8M19_00300;Name=D8M19_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00300 RBLY01000001.1 Protein Homology CDS 63094 64398 . + 0 ID=cds-RUP96085.1;Parent=gene-D8M19_00300;Dbxref=NCBI_GP:RUP96085.1;Name=RUP96085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846427.1;locus_tag=D8M19_00300;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP96085.1;transl_table=11 RBLY01000001.1 Genbank gene 64466 65158 . + . ID=gene-D8M19_00305;Name=D8M19_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00305 RBLY01000001.1 Protein Homology CDS 64466 65158 . + 0 ID=cds-RUP96086.1;Parent=gene-D8M19_00305;Dbxref=NCBI_GP:RUP96086.1;Name=RUP96086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121226.1;locus_tag=D8M19_00305;product=N-acetyltransferase;protein_id=RUP96086.1;transl_table=11 RBLY01000001.1 Genbank gene 65264 66781 . + . ID=gene-D8M19_00310;Name=D8M19_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00310 RBLY01000001.1 GeneMarkS+ CDS 65264 66781 . + 0 ID=cds-RUP96087.1;Parent=gene-D8M19_00310;Dbxref=NCBI_GP:RUP96087.1;Name=RUP96087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00310;product=hypothetical protein;protein_id=RUP96087.1;transl_table=11 RBLY01000001.1 Genbank gene 66785 67456 . - . ID=gene-D8M19_00315;Name=D8M19_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00315 RBLY01000001.1 Protein Homology CDS 66785 67456 . - 0 ID=cds-RUP96088.1;Parent=gene-D8M19_00315;Dbxref=NCBI_GP:RUP96088.1;Name=RUP96088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018178937.1;locus_tag=D8M19_00315;product=DNA-3-methyladenine glycosylase I;protein_id=RUP96088.1;transl_table=11 RBLY01000001.1 Genbank gene 67571 68005 . + . ID=gene-D8M19_00320;Name=D8M19_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00320 RBLY01000001.1 Protein Homology CDS 67571 68005 . + 0 ID=cds-RUP96089.1;Parent=gene-D8M19_00320;Dbxref=NCBI_GP:RUP96089.1;Name=RUP96089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07681.10;locus_tag=D8M19_00320;product=DoxX family protein;protein_id=RUP96089.1;transl_table=11 RBLY01000001.1 Genbank gene 67992 68702 . + . ID=gene-D8M19_00325;Name=D8M19_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00325 RBLY01000001.1 Protein Homology CDS 67992 68702 . + 0 ID=cds-RUP96090.1;Parent=gene-D8M19_00325;Dbxref=NCBI_GP:RUP96090.1;Name=RUP96090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13490.4;locus_tag=D8M19_00325;product=hypothetical protein;protein_id=RUP96090.1;transl_table=11 RBLY01000001.1 Genbank gene 68669 70300 . - . ID=gene-D8M19_00330;Name=D8M19_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00330 RBLY01000001.1 Protein Homology CDS 68669 70300 . - 0 ID=cds-RUP96091.1;Parent=gene-D8M19_00330;Dbxref=NCBI_GP:RUP96091.1;Name=RUP96091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400315.1;locus_tag=D8M19_00330;product=phospholipid carrier-dependent glycosyltransferase;protein_id=RUP96091.1;transl_table=11 RBLY01000001.1 Genbank gene 70434 71333 . + . ID=gene-D8M19_00335;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=D8M19_00335 RBLY01000001.1 Protein Homology CDS 70434 71333 . + 0 ID=cds-RUP96092.1;Parent=gene-D8M19_00335;Dbxref=NCBI_GP:RUP96092.1;Name=RUP96092.1;gbkey=CDS;gene=rsmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291302.1;locus_tag=D8M19_00335;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=RUP96092.1;transl_table=11 RBLY01000001.1 Genbank gene 71523 73382 . + . ID=gene-D8M19_00340;Name=D8M19_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00340 RBLY01000001.1 Protein Homology CDS 71523 73382 . + 0 ID=cds-RUP96093.1;Parent=gene-D8M19_00340;Dbxref=NCBI_GP:RUP96093.1;Name=RUP96093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121233.1;locus_tag=D8M19_00340;product=BCCT family transporter;protein_id=RUP96093.1;transl_table=11 RBLY01000001.1 Genbank gene 73514 75355 . + . ID=gene-D8M19_00345;Name=D8M19_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00345 RBLY01000001.1 Protein Homology CDS 73514 75355 . + 0 ID=cds-RUP96350.1;Parent=gene-D8M19_00345;Dbxref=NCBI_GP:RUP96350.1;Name=RUP96350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121234.1;locus_tag=D8M19_00345;product=methionine--tRNA ligase;protein_id=RUP96350.1;transl_table=11 RBLY01000001.1 Genbank gene 75408 76718 . + . ID=gene-D8M19_00350;Name=D8M19_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00350 RBLY01000001.1 Protein Homology CDS 75408 76718 . + 0 ID=cds-RUP96094.1;Parent=gene-D8M19_00350;Dbxref=NCBI_GP:RUP96094.1;Name=RUP96094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121235.1;locus_tag=D8M19_00350;product=MFS transporter;protein_id=RUP96094.1;transl_table=11 RBLY01000001.1 Genbank gene 76798 77637 . + . ID=gene-D8M19_00355;Name=D8M19_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00355 RBLY01000001.1 Protein Homology CDS 76798 77637 . + 0 ID=cds-RUP96095.1;Parent=gene-D8M19_00355;Dbxref=NCBI_GP:RUP96095.1;Name=RUP96095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400327.1;locus_tag=D8M19_00355;product=TatD family deoxyribonuclease;protein_id=RUP96095.1;transl_table=11 RBLY01000001.1 Genbank gene 77914 79080 . + . ID=gene-D8M19_00360;Name=D8M19_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00360 RBLY01000001.1 Protein Homology CDS 77914 79080 . + 0 ID=cds-RUP96096.1;Parent=gene-D8M19_00360;Dbxref=NCBI_GP:RUP96096.1;Name=RUP96096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187555.1;locus_tag=D8M19_00360;product=resuscitation-promoting factor;protein_id=RUP96096.1;transl_table=11 RBLY01000001.1 Genbank gene 79100 80014 . + . ID=gene-D8M19_00365;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=D8M19_00365 RBLY01000001.1 Protein Homology CDS 79100 80014 . + 0 ID=cds-RUP96097.1;Parent=gene-D8M19_00365;Dbxref=NCBI_GP:RUP96097.1;Name=RUP96097.1;gbkey=CDS;gene=rsmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119093.1;locus_tag=D8M19_00365;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=RUP96097.1;transl_table=11 RBLY01000001.1 Genbank gene 80032 81093 . + . ID=gene-D8M19_00370;Name=D8M19_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00370 RBLY01000001.1 Protein Homology CDS 80032 81093 . + 0 ID=cds-RUP96098.1;Parent=gene-D8M19_00370;Dbxref=NCBI_GP:RUP96098.1;Name=RUP96098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121239.1;locus_tag=D8M19_00370;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=RUP96098.1;transl_table=11 RBLY01000001.1 Genbank gene 81095 82420 . - . ID=gene-D8M19_00375;Name=D8M19_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00375 RBLY01000001.1 Protein Homology CDS 81095 82420 . - 0 ID=cds-RUP96351.1;Parent=gene-D8M19_00375;Dbxref=NCBI_GP:RUP96351.1;Name=RUP96351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282005.1;locus_tag=D8M19_00375;product=hypothetical protein;protein_id=RUP96351.1;transl_table=11 RBLY01000001.1 Genbank gene 82557 84377 . + . ID=gene-D8M19_00380;Name=D8M19_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00380 RBLY01000001.1 Protein Homology CDS 82557 84377 . + 0 ID=cds-RUP96099.1;Parent=gene-D8M19_00380;Dbxref=NCBI_GP:RUP96099.1;Name=RUP96099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121241.1;locus_tag=D8M19_00380;product=ABC transporter ATP-binding protein;protein_id=RUP96099.1;transl_table=11 RBLY01000001.1 Genbank gene 84478 84969 . + . ID=gene-D8M19_00385;Name=D8M19_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00385 RBLY01000001.1 GeneMarkS+ CDS 84478 84969 . + 0 ID=cds-RUP96100.1;Parent=gene-D8M19_00385;Dbxref=NCBI_GP:RUP96100.1;Name=RUP96100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00385;product=hypothetical protein;protein_id=RUP96100.1;transl_table=11 RBLY01000001.1 Genbank gene 85033 85356 . + . ID=gene-D8M19_00390;Name=D8M19_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00390 RBLY01000001.1 Protein Homology CDS 85033 85356 . + 0 ID=cds-RUP96352.1;Parent=gene-D8M19_00390;Dbxref=NCBI_GP:RUP96352.1;Name=RUP96352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016457015.1;locus_tag=D8M19_00390;product=antibiotic biosynthesis monooxygenase;protein_id=RUP96352.1;transl_table=11 RBLY01000001.1 Genbank gene 85509 86555 . + . ID=gene-D8M19_00395;Name=D8M19_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00395 RBLY01000001.1 Protein Homology CDS 85509 86555 . + 0 ID=cds-RUP96101.1;Parent=gene-D8M19_00395;Dbxref=NCBI_GP:RUP96101.1;Name=RUP96101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121244.1;locus_tag=D8M19_00395;product=enoyl-CoA hydratase/isomerase family protein;protein_id=RUP96101.1;transl_table=11 RBLY01000001.1 Genbank gene 86807 88990 . - . ID=gene-D8M19_00400;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=D8M19_00400 RBLY01000001.1 Protein Homology CDS 86807 88990 . - 0 ID=cds-RUP96102.1;Parent=gene-D8M19_00400;Dbxref=NCBI_GP:RUP96102.1;Name=RUP96102.1;gbkey=CDS;gene=glcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121246.1;locus_tag=D8M19_00400;product=malate synthase G;protein_id=RUP96102.1;transl_table=11 RBLY01000001.1 Genbank gene 89418 90710 . + . ID=gene-D8M19_00405;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=D8M19_00405 RBLY01000001.1 Protein Homology CDS 89418 90710 . + 0 ID=cds-RUP96103.1;Parent=gene-D8M19_00405;Dbxref=NCBI_GP:RUP96103.1;Name=RUP96103.1;gbkey=CDS;gene=aceA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601531.1;locus_tag=D8M19_00405;product=isocitrate lyase;protein_id=RUP96103.1;transl_table=11 RBLY01000001.1 Genbank gene 90713 91213 . + . ID=gene-D8M19_00410;Name=D8M19_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00410 RBLY01000001.1 Protein Homology CDS 90713 91213 . + 0 ID=cds-RUP96104.1;Parent=gene-D8M19_00410;Dbxref=NCBI_GP:RUP96104.1;Name=RUP96104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121248.1;locus_tag=D8M19_00410;product=RraA family protein;protein_id=RUP96104.1;transl_table=11 RBLY01000001.1 Genbank gene 91344 92519 . - . ID=gene-D8M19_00415;Name=D8M19_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00415 RBLY01000001.1 GeneMarkS+ CDS 91344 92519 . - 0 ID=cds-RUP96105.1;Parent=gene-D8M19_00415;Dbxref=NCBI_GP:RUP96105.1;Name=RUP96105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00415;product=hypothetical protein;protein_id=RUP96105.1;transl_table=11 RBLY01000001.1 Genbank gene 92628 93281 . + . ID=gene-D8M19_00420;Name=D8M19_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00420 RBLY01000001.1 Protein Homology CDS 92628 93281 . + 0 ID=cds-RUP96106.1;Parent=gene-D8M19_00420;Dbxref=NCBI_GP:RUP96106.1;Name=RUP96106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400358.1;locus_tag=D8M19_00420;product=hypothetical protein;protein_id=RUP96106.1;transl_table=11 RBLY01000001.1 Genbank gene 93301 93672 . - . ID=gene-D8M19_00425;Name=D8M19_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00425 RBLY01000001.1 GeneMarkS+ CDS 93301 93672 . - 0 ID=cds-RUP96107.1;Parent=gene-D8M19_00425;Dbxref=NCBI_GP:RUP96107.1;Name=RUP96107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00425;product=hypothetical protein;protein_id=RUP96107.1;transl_table=11 RBLY01000001.1 Genbank gene 93746 94615 . + . ID=gene-D8M19_00430;Name=D8M19_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00430 RBLY01000001.1 Protein Homology CDS 93746 94615 . + 0 ID=cds-RUP96108.1;Parent=gene-D8M19_00430;Dbxref=NCBI_GP:RUP96108.1;Name=RUP96108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017991.1;locus_tag=D8M19_00430;product=patatin family protein;protein_id=RUP96108.1;transl_table=11 RBLY01000001.1 Genbank gene 94837 95262 . + . ID=gene-D8M19_00435;Name=D8M19_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00435 RBLY01000001.1 GeneMarkS+ CDS 94837 95262 . + 0 ID=cds-RUP96109.1;Parent=gene-D8M19_00435;Dbxref=NCBI_GP:RUP96109.1;Name=RUP96109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00435;product=hypothetical protein;protein_id=RUP96109.1;transl_table=11 RBLY01000001.1 Genbank gene 95340 96920 . + . ID=gene-D8M19_00440;Name=D8M19_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00440 RBLY01000001.1 GeneMarkS+ CDS 95340 96920 . + 0 ID=cds-RUP96110.1;Parent=gene-D8M19_00440;Dbxref=NCBI_GP:RUP96110.1;Name=RUP96110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00440;product=hypothetical protein;protein_id=RUP96110.1;transl_table=11 RBLY01000001.1 Genbank gene 96949 98595 . - . ID=gene-D8M19_00445;Name=D8M19_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00445 RBLY01000001.1 Protein Homology CDS 96949 98595 . - 0 ID=cds-RUP96111.1;Parent=gene-D8M19_00445;Dbxref=NCBI_GP:RUP96111.1;Name=RUP96111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121255.1;locus_tag=D8M19_00445;product=peptide chain release factor 3;protein_id=RUP96111.1;transl_table=11 RBLY01000001.1 Genbank gene 98733 99296 . + . ID=gene-D8M19_00450;Name=D8M19_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00450 RBLY01000001.1 Protein Homology CDS 98733 99296 . + 0 ID=cds-RUP96112.1;Parent=gene-D8M19_00450;Dbxref=NCBI_GP:RUP96112.1;Name=RUP96112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03358.13;locus_tag=D8M19_00450;product=NADPH-dependent oxidoreductase;protein_id=RUP96112.1;transl_table=11 RBLY01000001.1 Genbank gene 99297 100001 . - . ID=gene-D8M19_00455;Name=D8M19_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00455 RBLY01000001.1 Protein Homology CDS 99297 100001 . - 0 ID=cds-RUP96113.1;Parent=gene-D8M19_00455;Dbxref=NCBI_GP:RUP96113.1;Name=RUP96113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187482.1;locus_tag=D8M19_00455;product=aminoacyl-tRNA hydrolase;protein_id=RUP96113.1;transl_table=11 RBLY01000001.1 Genbank gene 100079 101077 . + . ID=gene-D8M19_00460;Name=D8M19_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00460 RBLY01000001.1 Protein Homology CDS 100079 101077 . + 0 ID=cds-RUP96114.1;Parent=gene-D8M19_00460;Dbxref=NCBI_GP:RUP96114.1;Name=RUP96114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121258.1;locus_tag=D8M19_00460;product=nitronate monooxygenase;protein_id=RUP96114.1;transl_table=11 RBLY01000001.1 Genbank gene 101142 102608 . + . ID=gene-D8M19_00465;Name=D8M19_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00465 RBLY01000001.1 Protein Homology CDS 101142 102608 . + 0 ID=cds-RUP96115.1;Parent=gene-D8M19_00465;Dbxref=NCBI_GP:RUP96115.1;Name=RUP96115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187479.1;locus_tag=D8M19_00465;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=RUP96115.1;transl_table=11 RBLY01000001.1 Genbank gene 102796 103017 . + . ID=gene-D8M19_00470;Name=D8M19_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00470 RBLY01000001.1 GeneMarkS+ CDS 102796 103017 . + 0 ID=cds-RUP96116.1;Parent=gene-D8M19_00470;Dbxref=NCBI_GP:RUP96116.1;Name=RUP96116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00470;product=hypothetical protein;protein_id=RUP96116.1;transl_table=11 RBLY01000001.1 Genbank gene 103014 103493 . + . ID=gene-D8M19_00475;Name=D8M19_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00475 RBLY01000001.1 GeneMarkS+ CDS 103014 103493 . + 0 ID=cds-RUP96117.1;Parent=gene-D8M19_00475;Dbxref=NCBI_GP:RUP96117.1;Name=RUP96117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00475;product=hypothetical protein;protein_id=RUP96117.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 103594 103755 . + . ID=gene-D8M19_00480;Name=D8M19_00480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_00480;pseudo=true RBLY01000001.1 Protein Homology CDS 103594 103755 . + 0 ID=cds-D8M19_00480;Parent=gene-D8M19_00480;Note=catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium%3B NAD and NADP dependent%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005510607.1;locus_tag=D8M19_00480;product=glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 103898 104191 . - . ID=gene-D8M19_00485;Name=D8M19_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00485 RBLY01000001.1 Protein Homology CDS 103898 104191 . - 0 ID=cds-RUP96118.1;Parent=gene-D8M19_00485;Dbxref=NCBI_GP:RUP96118.1;Name=RUP96118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276388.1;locus_tag=D8M19_00485;product=antibiotic biosynthesis monooxygenase;protein_id=RUP96118.1;transl_table=11 RBLY01000001.1 Genbank gene 104281 105102 . - . ID=gene-D8M19_00490;Name=D8M19_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00490 RBLY01000001.1 Protein Homology CDS 104281 105102 . - 0 ID=cds-RUP96119.1;Parent=gene-D8M19_00490;Dbxref=NCBI_GP:RUP96119.1;Name=RUP96119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119884.1;locus_tag=D8M19_00490;product=class I SAM-dependent methyltransferase;protein_id=RUP96119.1;transl_table=11 RBLY01000001.1 Genbank gene 105329 106765 . - . ID=gene-D8M19_00495;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=D8M19_00495 RBLY01000001.1 Protein Homology CDS 105329 106765 . - 0 ID=cds-RUP96120.1;Parent=gene-D8M19_00495;Dbxref=NCBI_GP:RUP96120.1;Name=RUP96120.1;gbkey=CDS;gene=glnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601417.1;locus_tag=D8M19_00495;product=type I glutamate--ammonia ligase;protein_id=RUP96120.1;transl_table=11 RBLY01000001.1 Genbank gene 106867 107451 . - . ID=gene-D8M19_00500;Name=D8M19_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00500 RBLY01000001.1 Protein Homology CDS 106867 107451 . - 0 ID=cds-RUP96121.1;Parent=gene-D8M19_00500;Dbxref=NCBI_GP:RUP96121.1;Name=RUP96121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119886.1;locus_tag=D8M19_00500;product=aminoacyl-tRNA hydrolase;protein_id=RUP96121.1;transl_table=11 RBLY01000001.1 Genbank gene 107511 108197 . - . ID=gene-D8M19_00505;Name=D8M19_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00505 RBLY01000001.1 Protein Homology CDS 107511 108197 . - 0 ID=cds-RUP96122.1;Parent=gene-D8M19_00505;Dbxref=NCBI_GP:RUP96122.1;Name=RUP96122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119887.1;locus_tag=D8M19_00505;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=RUP96122.1;transl_table=11 RBLY01000001.1 Genbank gene 108446 109216 . - . ID=gene-D8M19_00510;Name=D8M19_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00510 RBLY01000001.1 Protein Homology CDS 108446 109216 . - 0 ID=cds-RUP96123.1;Parent=gene-D8M19_00510;Dbxref=NCBI_GP:RUP96123.1;Name=RUP96123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119888.1;locus_tag=D8M19_00510;product=SDR family oxidoreductase;protein_id=RUP96123.1;transl_table=11 RBLY01000001.1 Genbank gene 109216 110205 . - . ID=gene-D8M19_00515;Name=D8M19_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00515 RBLY01000001.1 Protein Homology CDS 109216 110205 . - 0 ID=cds-RUP96124.1;Parent=gene-D8M19_00515;Dbxref=NCBI_GP:RUP96124.1;Name=RUP96124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016423206.1;locus_tag=D8M19_00515;product=ribose-phosphate diphosphokinase;protein_id=RUP96124.1;transl_table=11 RBLY01000001.1 Genbank gene 110231 111739 . - . ID=gene-D8M19_00520;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=D8M19_00520 RBLY01000001.1 Protein Homology CDS 110231 111739 . - 0 ID=cds-RUP96125.1;Parent=gene-D8M19_00520;Dbxref=NCBI_GP:RUP96125.1;Name=RUP96125.1;gbkey=CDS;gene=glmU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119890.1;locus_tag=D8M19_00520;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=RUP96125.1;transl_table=11 RBLY01000001.1 Genbank gene 111829 113097 . - . ID=gene-D8M19_00525;Name=D8M19_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00525 RBLY01000001.1 Protein Homology CDS 111829 113097 . - 0 ID=cds-RUP96126.1;Parent=gene-D8M19_00525;Dbxref=NCBI_GP:RUP96126.1;Name=RUP96126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119891.1;locus_tag=D8M19_00525;product=MFS transporter;protein_id=RUP96126.1;transl_table=11 RBLY01000001.1 Genbank gene 113440 117162 . + . ID=gene-D8M19_00530;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=D8M19_00530 RBLY01000001.1 Protein Homology CDS 113440 117162 . + 0 ID=cds-RUP96353.1;Parent=gene-D8M19_00530;Dbxref=NCBI_GP:RUP96353.1;Name=RUP96353.1;gbkey=CDS;gene=mfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119892.1;locus_tag=D8M19_00530;product=transcription-repair coupling factor;protein_id=RUP96353.1;transl_table=11 RBLY01000001.1 Genbank gene 117237 117842 . + . ID=gene-D8M19_00535;Name=D8M19_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00535 RBLY01000001.1 Protein Homology CDS 117237 117842 . + 0 ID=cds-RUP96127.1;Parent=gene-D8M19_00535;Dbxref=NCBI_GP:RUP96127.1;Name=RUP96127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119893.1;locus_tag=D8M19_00535;product=DNA-3-methyladenine glycosylase;protein_id=RUP96127.1;transl_table=11 RBLY01000001.1 Genbank gene 117859 118308 . + . ID=gene-D8M19_00540;Name=D8M19_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00540 RBLY01000001.1 Protein Homology CDS 117859 118308 . + 0 ID=cds-RUP96128.1;Parent=gene-D8M19_00540;Dbxref=NCBI_GP:RUP96128.1;Name=RUP96128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M19_00540;product=TetR family transcriptional regulator;protein_id=RUP96128.1;transl_table=11 RBLY01000001.1 Genbank gene 118493 120499 . - . ID=gene-D8M19_00545;Name=D8M19_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00545 RBLY01000001.1 Protein Homology CDS 118493 120499 . - 0 ID=cds-RUP96129.1;Parent=gene-D8M19_00545;Dbxref=NCBI_GP:RUP96129.1;Name=RUP96129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017566.1;locus_tag=D8M19_00545;product=exopolyphosphatase;protein_id=RUP96129.1;transl_table=11 RBLY01000001.1 Genbank gene 120496 121455 . - . ID=gene-D8M19_00550;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=D8M19_00550 RBLY01000001.1 Protein Homology CDS 120496 121455 . - 0 ID=cds-RUP96130.1;Parent=gene-D8M19_00550;Dbxref=NCBI_GP:RUP96130.1;Name=RUP96130.1;gbkey=CDS;gene=nadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119896.1;locus_tag=D8M19_00550;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=RUP96130.1;transl_table=11 RBLY01000001.1 Genbank gene 121456 122514 . - . ID=gene-D8M19_00555;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=D8M19_00555 RBLY01000001.1 Protein Homology CDS 121456 122514 . - 0 ID=cds-RUP96354.1;Parent=gene-D8M19_00555;Dbxref=NCBI_GP:RUP96354.1;Name=RUP96354.1;gbkey=CDS;gene=nadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282081.1;locus_tag=D8M19_00555;product=quinolinate synthase NadA;protein_id=RUP96354.1;transl_table=11 RBLY01000001.1 Genbank gene 122642 124084 . - . ID=gene-D8M19_00560;Name=D8M19_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00560 RBLY01000001.1 Protein Homology CDS 122642 124084 . - 0 ID=cds-RUP96355.1;Parent=gene-D8M19_00560;Dbxref=NCBI_GP:RUP96355.1;Name=RUP96355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119898.1;locus_tag=D8M19_00560;product=amino acid permease;protein_id=RUP96355.1;transl_table=11 RBLY01000001.1 Genbank gene 124287 124922 . + . ID=gene-D8M19_00565;Name=D8M19_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00565 RBLY01000001.1 Protein Homology CDS 124287 124922 . + 0 ID=cds-RUP96131.1;Parent=gene-D8M19_00565;Dbxref=NCBI_GP:RUP96131.1;Name=RUP96131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714962.1;locus_tag=D8M19_00565;product=nucleoside triphosphate hydrolase;protein_id=RUP96131.1;transl_table=11 RBLY01000001.1 Genbank gene 124971 125738 . + . ID=gene-D8M19_00570;Name=D8M19_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00570 RBLY01000001.1 Protein Homology CDS 124971 125738 . + 0 ID=cds-RUP96356.1;Parent=gene-D8M19_00570;Dbxref=NCBI_GP:RUP96356.1;Name=RUP96356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004568175.1;locus_tag=D8M19_00570;product=hypothetical protein;protein_id=RUP96356.1;transl_table=11 RBLY01000001.1 Genbank gene 125846 127123 . + . ID=gene-D8M19_00575;Name=D8M19_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00575 RBLY01000001.1 Protein Homology CDS 125846 127123 . + 0 ID=cds-RUP96132.1;Parent=gene-D8M19_00575;Dbxref=NCBI_GP:RUP96132.1;Name=RUP96132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600201.1;locus_tag=D8M19_00575;product=phosphopyruvate hydratase;protein_id=RUP96132.1;transl_table=11 RBLY01000001.1 Genbank gene 127155 127757 . + . ID=gene-D8M19_00580;Name=D8M19_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00580 RBLY01000001.1 Protein Homology CDS 127155 127757 . + 0 ID=cds-RUP96133.1;Parent=gene-D8M19_00580;Dbxref=NCBI_GP:RUP96133.1;Name=RUP96133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119902.1;locus_tag=D8M19_00580;product=septum formation initiator family protein;protein_id=RUP96133.1;transl_table=11 RBLY01000001.1 Genbank gene 127811 128362 . + . ID=gene-D8M19_00585;Name=D8M19_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00585 RBLY01000001.1 Protein Homology CDS 127811 128362 . + 0 ID=cds-RUP96134.1;Parent=gene-D8M19_00585;Dbxref=NCBI_GP:RUP96134.1;Name=RUP96134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529980.1;locus_tag=D8M19_00585;product=DUF501 domain-containing protein;protein_id=RUP96134.1;transl_table=11 RBLY01000001.1 Genbank gene 128400 129386 . + . ID=gene-D8M19_00590;Name=D8M19_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00590 RBLY01000001.1 Protein Homology CDS 128400 129386 . + 0 ID=cds-RUP96135.1;Parent=gene-D8M19_00590;Dbxref=NCBI_GP:RUP96135.1;Name=RUP96135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119904.1;locus_tag=D8M19_00590;product=Ppx/GppA family phosphatase;protein_id=RUP96135.1;transl_table=11 RBLY01000001.1 Genbank gene 129434 129510 . + . ID=gene-D8M19_00595;Name=D8M19_00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_00595 RBLY01000001.1 tRNAscan-SE tRNA 129434 129510 . + . ID=rna-D8M19_00595;Parent=gene-D8M19_00595;anticodon=(pos:129468..129470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_00595;product=tRNA-Leu RBLY01000001.1 tRNAscan-SE exon 129434 129510 . + . ID=exon-D8M19_00595-1;Parent=rna-D8M19_00595;anticodon=(pos:129468..129470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_00595;product=tRNA-Leu RBLY01000001.1 Genbank gene 129712 130533 . + . ID=gene-D8M19_00600;Name=D8M19_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00600 RBLY01000001.1 Protein Homology CDS 129712 130533 . + 0 ID=cds-RUP96136.1;Parent=gene-D8M19_00600;Dbxref=NCBI_GP:RUP96136.1;Name=RUP96136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119905.1;locus_tag=D8M19_00600;product=hypothetical protein;protein_id=RUP96136.1;transl_table=11 RBLY01000001.1 Genbank gene 130730 131353 . - . ID=gene-D8M19_00605;Name=D8M19_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00605 RBLY01000001.1 GeneMarkS+ CDS 130730 131353 . - 0 ID=cds-RUP96137.1;Parent=gene-D8M19_00605;Dbxref=NCBI_GP:RUP96137.1;Name=RUP96137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00605;product=hypothetical protein;protein_id=RUP96137.1;transl_table=11 RBLY01000001.1 Genbank gene 131367 131891 . - . ID=gene-D8M19_00610;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=D8M19_00610 RBLY01000001.1 Protein Homology CDS 131367 131891 . - 0 ID=cds-RUP96138.1;Parent=gene-D8M19_00610;Dbxref=NCBI_GP:RUP96138.1;Name=RUP96138.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400407.1;locus_tag=D8M19_00610;product=transcription elongation factor GreA;protein_id=RUP96138.1;transl_table=11 RBLY01000001.1 Genbank gene 132036 132491 . - . ID=gene-D8M19_00615;Name=D8M19_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00615 RBLY01000001.1 Protein Homology CDS 132036 132491 . - 0 ID=cds-RUP96139.1;Parent=gene-D8M19_00615;Dbxref=NCBI_GP:RUP96139.1;Name=RUP96139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14155.4;locus_tag=D8M19_00615;product=DUF4307 domain-containing protein;protein_id=RUP96139.1;transl_table=11 RBLY01000001.1 Genbank gene 132630 133496 . + . ID=gene-D8M19_00620;Name=mca;gbkey=Gene;gene=mca;gene_biotype=protein_coding;locus_tag=D8M19_00620 RBLY01000001.1 Protein Homology CDS 132630 133496 . + 0 ID=cds-RUP96140.1;Parent=gene-D8M19_00620;Dbxref=NCBI_GP:RUP96140.1;Name=RUP96140.1;gbkey=CDS;gene=mca;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119909.1;locus_tag=D8M19_00620;product=mycothiol conjugate amidase Mca;protein_id=RUP96140.1;transl_table=11 RBLY01000001.1 Genbank gene 133496 133816 . + . ID=gene-D8M19_00625;Name=D8M19_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00625 RBLY01000001.1 Protein Homology CDS 133496 133816 . + 0 ID=cds-RUP96141.1;Parent=gene-D8M19_00625;Dbxref=NCBI_GP:RUP96141.1;Name=RUP96141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119910.1;locus_tag=D8M19_00625;product=hypothetical protein;protein_id=RUP96141.1;transl_table=11 RBLY01000001.1 Genbank gene 133819 134586 . + . ID=gene-D8M19_00630;Name=D8M19_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00630 RBLY01000001.1 Protein Homology CDS 133819 134586 . + 0 ID=cds-RUP96142.1;Parent=gene-D8M19_00630;Dbxref=NCBI_GP:RUP96142.1;Name=RUP96142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187364.1;locus_tag=D8M19_00630;product=isoprenyl transferase;protein_id=RUP96142.1;transl_table=11 RBLY01000001.1 Genbank gene 134653 135567 . - . ID=gene-D8M19_00635;Name=D8M19_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00635 RBLY01000001.1 Protein Homology CDS 134653 135567 . - 0 ID=cds-RUP96143.1;Parent=gene-D8M19_00635;Dbxref=NCBI_GP:RUP96143.1;Name=RUP96143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119912.1;locus_tag=D8M19_00635;product=type I pantothenate kinase;protein_id=RUP96143.1;transl_table=11 RBLY01000001.1 Genbank gene 135649 136917 . + . ID=gene-D8M19_00640;Name=D8M19_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00640 RBLY01000001.1 Protein Homology CDS 135649 136917 . + 0 ID=cds-RUP96144.1;Parent=gene-D8M19_00640;Dbxref=NCBI_GP:RUP96144.1;Name=RUP96144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119913.1;locus_tag=D8M19_00640;product=serine hydroxymethyltransferase;protein_id=RUP96144.1;transl_table=11 RBLY01000001.1 Genbank gene 136922 139114 . + . ID=gene-D8M19_00645;Name=D8M19_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00645 RBLY01000001.1 Protein Homology CDS 136922 139114 . + 0 ID=cds-RUP96145.1;Parent=gene-D8M19_00645;Dbxref=NCBI_GP:RUP96145.1;Name=RUP96145.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00425.16%2CHMM:TIGR00566;locus_tag=D8M19_00645;product=aminodeoxychorismate synthase component I;protein_id=RUP96145.1;transl_table=11 RBLY01000001.1 Genbank gene 139218 140150 . + . ID=gene-D8M19_00650;Name=D8M19_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00650 RBLY01000001.1 Protein Homology CDS 139218 140150 . + 0 ID=cds-RUP96146.1;Parent=gene-D8M19_00650;Dbxref=NCBI_GP:RUP96146.1;Name=RUP96146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119915.1;locus_tag=D8M19_00650;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP96146.1;transl_table=11 RBLY01000001.1 Genbank gene 140255 141034 . + . ID=gene-D8M19_00655;Name=D8M19_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00655 RBLY01000001.1 Protein Homology CDS 140255 141034 . + 0 ID=cds-RUP96147.1;Parent=gene-D8M19_00655;Dbxref=NCBI_GP:RUP96147.1;Name=RUP96147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01063.17;locus_tag=D8M19_00655;product=hypothetical protein;protein_id=RUP96147.1;transl_table=11 RBLY01000001.1 Genbank gene 141088 141432 . - . ID=gene-D8M19_00660;Name=D8M19_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00660 RBLY01000001.1 Protein Homology CDS 141088 141432 . - 0 ID=cds-RUP96357.1;Parent=gene-D8M19_00660;Dbxref=NCBI_GP:RUP96357.1;Name=RUP96357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400420.1;locus_tag=D8M19_00660;product=transcriptional regulator;protein_id=RUP96357.1;transl_table=11 RBLY01000001.1 Genbank gene 141681 142046 . - . ID=gene-D8M19_00665;Name=D8M19_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00665 RBLY01000001.1 Protein Homology CDS 141681 142046 . - 0 ID=cds-RUP96148.1;Parent=gene-D8M19_00665;Dbxref=NCBI_GP:RUP96148.1;Name=RUP96148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014307910.1;locus_tag=D8M19_00665;product=PH domain-containing protein;protein_id=RUP96148.1;transl_table=11 RBLY01000001.1 Genbank gene 142113 143003 . + . ID=gene-D8M19_00670;Name=D8M19_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00670 RBLY01000001.1 Protein Homology CDS 142113 143003 . + 0 ID=cds-RUP96149.1;Parent=gene-D8M19_00670;Dbxref=NCBI_GP:RUP96149.1;Name=RUP96149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119919.1;locus_tag=D8M19_00670;product=LysR family transcriptional regulator;protein_id=RUP96149.1;transl_table=11 RBLY01000001.1 Genbank gene 143147 143674 . + . ID=gene-D8M19_00675;Name=D8M19_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00675 RBLY01000001.1 Protein Homology CDS 143147 143674 . + 0 ID=cds-RUP96150.1;Parent=gene-D8M19_00675;Dbxref=NCBI_GP:RUP96150.1;Name=RUP96150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119920.1;locus_tag=D8M19_00675;product=N-acetyltransferase;protein_id=RUP96150.1;transl_table=11 RBLY01000001.1 Genbank gene 143707 144570 . - . ID=gene-D8M19_00680;Name=D8M19_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00680 RBLY01000001.1 Protein Homology CDS 143707 144570 . - 0 ID=cds-RUP96151.1;Parent=gene-D8M19_00680;Dbxref=NCBI_GP:RUP96151.1;Name=RUP96151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061778.1;locus_tag=D8M19_00680;product=biotin-dependent carboxyltransferase family protein;protein_id=RUP96151.1;transl_table=11 RBLY01000001.1 Genbank gene 144564 145190 . - . ID=gene-D8M19_00685;Name=D8M19_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00685 RBLY01000001.1 Protein Homology CDS 144564 145190 . - 0 ID=cds-RUP96152.1;Parent=gene-D8M19_00685;Dbxref=NCBI_GP:RUP96152.1;Name=RUP96152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02682.14;locus_tag=D8M19_00685;product=allophanate hydrolase subunit 1;protein_id=RUP96152.1;transl_table=11 RBLY01000001.1 Genbank gene 145184 145957 . - . ID=gene-D8M19_00690;Name=D8M19_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00690 RBLY01000001.1 Protein Homology CDS 145184 145957 . - 0 ID=cds-RUP96153.1;Parent=gene-D8M19_00690;Dbxref=NCBI_GP:RUP96153.1;Name=RUP96153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119923.1;locus_tag=D8M19_00690;product=LamB/YcsF family protein;protein_id=RUP96153.1;transl_table=11 RBLY01000001.1 Genbank gene 146038 147321 . - . ID=gene-D8M19_00695;Name=D8M19_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00695 RBLY01000001.1 Protein Homology CDS 146038 147321 . - 0 ID=cds-RUP96154.1;Parent=gene-D8M19_00695;Dbxref=NCBI_GP:RUP96154.1;Name=RUP96154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119924.1;locus_tag=D8M19_00695;product=divalent metal cation transporter;protein_id=RUP96154.1;transl_table=11 RBLY01000001.1 Genbank gene 147514 148185 . + . ID=gene-D8M19_00700;Name=D8M19_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00700 RBLY01000001.1 Protein Homology CDS 147514 148185 . + 0 ID=cds-RUP96155.1;Parent=gene-D8M19_00700;Dbxref=NCBI_GP:RUP96155.1;Name=RUP96155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00392.19;locus_tag=D8M19_00700;product=GntR family transcriptional regulator;protein_id=RUP96155.1;transl_table=11 RBLY01000001.1 Genbank gene 148205 149344 . + . ID=gene-D8M19_00705;Name=D8M19_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00705 RBLY01000001.1 Protein Homology CDS 148205 149344 . + 0 ID=cds-RUP96156.1;Parent=gene-D8M19_00705;Dbxref=NCBI_GP:RUP96156.1;Name=RUP96156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119926.1;locus_tag=D8M19_00705;product=hypothetical protein;protein_id=RUP96156.1;transl_table=11 RBLY01000001.1 Genbank gene 149474 150307 . + . ID=gene-D8M19_00710;Name=D8M19_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00710 RBLY01000001.1 GeneMarkS+ CDS 149474 150307 . + 0 ID=cds-RUP96157.1;Parent=gene-D8M19_00710;Dbxref=NCBI_GP:RUP96157.1;Name=RUP96157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00710;product=hypothetical protein;protein_id=RUP96157.1;transl_table=11 RBLY01000001.1 Genbank gene 150312 152300 . - . ID=gene-D8M19_00715;Name=D8M19_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00715 RBLY01000001.1 GeneMarkS+ CDS 150312 152300 . - 0 ID=cds-RUP96158.1;Parent=gene-D8M19_00715;Dbxref=NCBI_GP:RUP96158.1;Name=RUP96158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00715;product=hypothetical protein;protein_id=RUP96158.1;transl_table=11 RBLY01000001.1 Genbank gene 152321 152944 . - . ID=gene-D8M19_00720;Name=D8M19_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00720 RBLY01000001.1 Protein Homology CDS 152321 152944 . - 0 ID=cds-RUP96159.1;Parent=gene-D8M19_00720;Dbxref=NCBI_GP:RUP96159.1;Name=RUP96159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12079.6;locus_tag=D8M19_00720;product=DUF3558 domain-containing protein;protein_id=RUP96159.1;transl_table=11 RBLY01000001.1 Genbank gene 154199 154564 . - . ID=gene-D8M19_00725;Name=D8M19_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00725 RBLY01000001.1 Protein Homology CDS 154199 154564 . - 0 ID=cds-RUP96160.1;Parent=gene-D8M19_00725;Dbxref=NCBI_GP:RUP96160.1;Name=RUP96160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520728.1;locus_tag=D8M19_00725;product=alkylphosphonate utilization protein;protein_id=RUP96160.1;transl_table=11 RBLY01000001.1 Genbank gene 154790 156193 . - . ID=gene-D8M19_00730;Name=D8M19_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00730 RBLY01000001.1 Protein Homology CDS 154790 156193 . - 0 ID=cds-RUP96161.1;Parent=gene-D8M19_00730;Dbxref=NCBI_GP:RUP96161.1;Name=RUP96161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359865.1;locus_tag=D8M19_00730;product=class II fumarate hydratase;protein_id=RUP96161.1;transl_table=11 RBLY01000001.1 Genbank gene 156326 157336 . - . ID=gene-D8M19_00735;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=D8M19_00735 RBLY01000001.1 Protein Homology CDS 156326 157336 . - 0 ID=cds-RUP96162.1;Parent=gene-D8M19_00735;Dbxref=NCBI_GP:RUP96162.1;Name=RUP96162.1;gbkey=CDS;gene=glpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119932.1;locus_tag=D8M19_00735;product=class II fructose-bisphosphatase;protein_id=RUP96162.1;transl_table=11 RBLY01000001.1 Genbank gene 157439 158137 . + . ID=gene-D8M19_00740;Name=D8M19_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00740 RBLY01000001.1 Protein Homology CDS 157439 158137 . + 0 ID=cds-RUP96163.1;Parent=gene-D8M19_00740;Dbxref=NCBI_GP:RUP96163.1;Name=RUP96163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14030.4;locus_tag=D8M19_00740;product=DUF4245 domain-containing protein;protein_id=RUP96163.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 158146 159350 . - . ID=gene-D8M19_00745;Name=D8M19_00745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_00745;pseudo=true RBLY01000001.1 Protein Homology CDS 158146 159350 . - 0 ID=cds-D8M19_00745;Parent=gene-D8M19_00745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119934.1;locus_tag=D8M19_00745;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 159332 159541 . - . ID=gene-D8M19_00750;Name=D8M19_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00750 RBLY01000001.1 Protein Homology CDS 159332 159541 . - 0 ID=cds-RUP96164.1;Parent=gene-D8M19_00750;Dbxref=NCBI_GP:RUP96164.1;Name=RUP96164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768118.1;locus_tag=D8M19_00750;product=hypothetical protein;protein_id=RUP96164.1;transl_table=11 RBLY01000001.1 Genbank gene 159557 159850 . - . ID=gene-D8M19_00755;Name=D8M19_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00755 RBLY01000001.1 Protein Homology CDS 159557 159850 . - 0 ID=cds-RUP96165.1;Parent=gene-D8M19_00755;Dbxref=NCBI_GP:RUP96165.1;Name=RUP96165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119936.1;locus_tag=D8M19_00755;product=exodeoxyribonuclease VII small subunit;protein_id=RUP96165.1;transl_table=11 RBLY01000001.1 Genbank gene 159945 161183 . - . ID=gene-D8M19_00760;Name=D8M19_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00760 RBLY01000001.1 Protein Homology CDS 159945 161183 . - 0 ID=cds-RUP96358.1;Parent=gene-D8M19_00760;Dbxref=NCBI_GP:RUP96358.1;Name=RUP96358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327446.1;locus_tag=D8M19_00760;product=exodeoxyribonuclease VII large subunit;protein_id=RUP96358.1;transl_table=11 RBLY01000001.1 Genbank gene 161279 162262 . + . ID=gene-D8M19_00765;Name=D8M19_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00765 RBLY01000001.1 Protein Homology CDS 161279 162262 . + 0 ID=cds-RUP96166.1;Parent=gene-D8M19_00765;Dbxref=NCBI_GP:RUP96166.1;Name=RUP96166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119938.1;locus_tag=D8M19_00765;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=RUP96166.1;transl_table=11 RBLY01000001.1 Genbank gene 162279 163004 . - . ID=gene-D8M19_00770;Name=D8M19_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00770 RBLY01000001.1 GeneMarkS+ CDS 162279 163004 . - 0 ID=cds-RUP96167.1;Parent=gene-D8M19_00770;Dbxref=NCBI_GP:RUP96167.1;Name=RUP96167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00770;product=hypothetical protein;protein_id=RUP96167.1;transl_table=11 RBLY01000001.1 Genbank gene 163088 164281 . - . ID=gene-D8M19_00775;Name=D8M19_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00775 RBLY01000001.1 Protein Homology CDS 163088 164281 . - 0 ID=cds-RUP96168.1;Parent=gene-D8M19_00775;Dbxref=NCBI_GP:RUP96168.1;Name=RUP96168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119940.1;locus_tag=D8M19_00775;product=DNA recombination protein RmuC;protein_id=RUP96168.1;transl_table=11 RBLY01000001.1 Genbank gene 164314 165810 . - . ID=gene-D8M19_00780;Name=D8M19_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00780 RBLY01000001.1 Protein Homology CDS 164314 165810 . - 0 ID=cds-RUP96359.1;Parent=gene-D8M19_00780;Dbxref=NCBI_GP:RUP96359.1;Name=RUP96359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119941.1;locus_tag=D8M19_00780;product=AI-2E family transporter;protein_id=RUP96359.1;transl_table=11 RBLY01000001.1 Genbank gene 165962 167047 . + . ID=gene-D8M19_00785;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=D8M19_00785 RBLY01000001.1 Protein Homology CDS 165962 167047 . + 0 ID=cds-RUP96169.1;Parent=gene-D8M19_00785;Dbxref=NCBI_GP:RUP96169.1;Name=RUP96169.1;gbkey=CDS;gene=ychF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187319.1;locus_tag=D8M19_00785;product=redox-regulated ATPase YchF;protein_id=RUP96169.1;transl_table=11 RBLY01000001.1 Genbank gene 167083 167787 . + . ID=gene-D8M19_00790;Name=D8M19_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00790 RBLY01000001.1 Protein Homology CDS 167083 167787 . + 0 ID=cds-RUP96170.1;Parent=gene-D8M19_00790;Dbxref=NCBI_GP:RUP96170.1;Name=RUP96170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327386.1;locus_tag=D8M19_00790;product=VUT family protein;protein_id=RUP96170.1;transl_table=11 RBLY01000001.1 Genbank gene 167803 168555 . + . ID=gene-D8M19_00795;Name=D8M19_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00795 RBLY01000001.1 Protein Homology CDS 167803 168555 . + 0 ID=cds-RUP96171.1;Parent=gene-D8M19_00795;Dbxref=NCBI_GP:RUP96171.1;Name=RUP96171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119944.1;locus_tag=D8M19_00795;product=PIG-L family deacetylase;protein_id=RUP96171.1;transl_table=11 RBLY01000001.1 Genbank gene 168552 169289 . - . ID=gene-D8M19_00800;Name=D8M19_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00800 RBLY01000001.1 GeneMarkS+ CDS 168552 169289 . - 0 ID=cds-RUP96172.1;Parent=gene-D8M19_00800;Dbxref=NCBI_GP:RUP96172.1;Name=RUP96172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00800;product=hypothetical protein;protein_id=RUP96172.1;transl_table=11 RBLY01000001.1 Genbank gene 169458 170225 . + . ID=gene-D8M19_00805;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=D8M19_00805 RBLY01000001.1 Protein Homology CDS 169458 170225 . + 0 ID=cds-RUP96173.1;Parent=gene-D8M19_00805;Dbxref=NCBI_GP:RUP96173.1;Name=RUP96173.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119946.1;locus_tag=D8M19_00805;product=zinc transporter ZupT;protein_id=RUP96173.1;transl_table=11 RBLY01000001.1 Genbank gene 170266 170892 . - . ID=gene-D8M19_00810;Name=D8M19_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00810 RBLY01000001.1 Protein Homology CDS 170266 170892 . - 0 ID=cds-RUP96174.1;Parent=gene-D8M19_00810;Dbxref=NCBI_GP:RUP96174.1;Name=RUP96174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119947.1;locus_tag=D8M19_00810;product=DUF402 domain-containing protein;protein_id=RUP96174.1;transl_table=11 RBLY01000001.1 Genbank gene 170912 171658 . - . ID=gene-D8M19_00815;Name=D8M19_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00815 RBLY01000001.1 Protein Homology CDS 170912 171658 . - 0 ID=cds-RUP96175.1;Parent=gene-D8M19_00815;Dbxref=NCBI_GP:RUP96175.1;Name=RUP96175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119948.1;locus_tag=D8M19_00815;product=hypothetical protein;protein_id=RUP96175.1;transl_table=11 RBLY01000001.1 Genbank gene 172106 174010 . + . ID=gene-D8M19_00820;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=D8M19_00820 RBLY01000001.1 Protein Homology CDS 172106 174010 . + 0 ID=cds-RUP96176.1;Parent=gene-D8M19_00820;Dbxref=NCBI_GP:RUP96176.1;Name=RUP96176.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119949.1;locus_tag=D8M19_00820;product=translational GTPase TypA;protein_id=RUP96176.1;transl_table=11 RBLY01000001.1 Genbank gene 174047 175942 . + . ID=gene-D8M19_00825;Name=D8M19_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00825 RBLY01000001.1 Protein Homology CDS 174047 175942 . + 0 ID=cds-RUP96177.1;Parent=gene-D8M19_00825;Dbxref=NCBI_GP:RUP96177.1;Name=RUP96177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00496.20;locus_tag=D8M19_00825;product=ABC transporter family substrate-binding protein;protein_id=RUP96177.1;transl_table=11 RBLY01000001.1 Genbank gene 176003 176854 . + . ID=gene-D8M19_00830;Name=D8M19_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00830 RBLY01000001.1 Protein Homology CDS 176003 176854 . + 0 ID=cds-RUP96178.1;Parent=gene-D8M19_00830;Dbxref=NCBI_GP:RUP96178.1;Name=RUP96178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295875.1;locus_tag=D8M19_00830;product=N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase;protein_id=RUP96178.1;transl_table=11 RBLY01000001.1 Genbank gene 176839 177216 . + . ID=gene-D8M19_00835;Name=D8M19_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00835 RBLY01000001.1 GeneMarkS+ CDS 176839 177216 . + 0 ID=cds-RUP96179.1;Parent=gene-D8M19_00835;Dbxref=NCBI_GP:RUP96179.1;Name=RUP96179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00835;product=hypothetical protein;protein_id=RUP96179.1;transl_table=11 RBLY01000001.1 Genbank gene 177239 177571 . + . ID=gene-D8M19_00840;Name=D8M19_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00840 RBLY01000001.1 Protein Homology CDS 177239 177571 . + 0 ID=cds-RUP96180.1;Parent=gene-D8M19_00840;Dbxref=NCBI_GP:RUP96180.1;Name=RUP96180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119953.1;locus_tag=D8M19_00840;product=ferredoxin family protein;protein_id=RUP96180.1;transl_table=11 RBLY01000001.1 Genbank gene 177657 178751 . + . ID=gene-D8M19_00845;Name=D8M19_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00845 RBLY01000001.1 Protein Homology CDS 177657 178751 . + 0 ID=cds-RUP96181.1;Parent=gene-D8M19_00845;Dbxref=NCBI_GP:RUP96181.1;Name=RUP96181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119954.1;locus_tag=D8M19_00845;product=succinyldiaminopimelate transaminase;protein_id=RUP96181.1;transl_table=11 RBLY01000001.1 Genbank gene 178847 179350 . + . ID=gene-D8M19_00850;Name=D8M19_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00850 RBLY01000001.1 Protein Homology CDS 178847 179350 . + 0 ID=cds-RUP96360.1;Parent=gene-D8M19_00850;Dbxref=NCBI_GP:RUP96360.1;Name=RUP96360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400544.1;locus_tag=D8M19_00850;product=GtrA family protein;protein_id=RUP96360.1;transl_table=11 RBLY01000001.1 Genbank gene 179405 180376 . - . ID=gene-D8M19_00855;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=D8M19_00855 RBLY01000001.1 Protein Homology CDS 179405 180376 . - 0 ID=cds-RUP96182.1;Parent=gene-D8M19_00855;Dbxref=NCBI_GP:RUP96182.1;Name=RUP96182.1;gbkey=CDS;gene=dapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848534.1;locus_tag=D8M19_00855;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=RUP96182.1;transl_table=11 RBLY01000001.1 Genbank gene 180521 181927 . - . ID=gene-D8M19_00860;Name=D8M19_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00860 RBLY01000001.1 Protein Homology CDS 180521 181927 . - 0 ID=cds-RUP96183.1;Parent=gene-D8M19_00860;Dbxref=NCBI_GP:RUP96183.1;Name=RUP96183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119957.1;locus_tag=D8M19_00860;product=amino acid permease;protein_id=RUP96183.1;transl_table=11 RBLY01000001.1 Genbank gene 182204 183454 . + . ID=gene-D8M19_00865;Name=D8M19_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00865 RBLY01000001.1 Protein Homology CDS 182204 183454 . + 0 ID=cds-RUP96184.1;Parent=gene-D8M19_00865;Dbxref=NCBI_GP:RUP96184.1;Name=RUP96184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441528.1;locus_tag=D8M19_00865;product=succinyl-diaminopimelate desuccinylase;protein_id=RUP96184.1;transl_table=11 RBLY01000001.1 Genbank gene 183597 184358 . + . ID=gene-D8M19_00870;Name=D8M19_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00870 RBLY01000001.1 Protein Homology CDS 183597 184358 . + 0 ID=cds-RUP96361.1;Parent=gene-D8M19_00870;Dbxref=NCBI_GP:RUP96361.1;Name=RUP96361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531895.1;locus_tag=D8M19_00870;product=TIGR00730 family Rossman fold protein;protein_id=RUP96361.1;transl_table=11 RBLY01000001.1 Genbank gene 184363 185175 . + . ID=gene-D8M19_00875;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D8M19_00875 RBLY01000001.1 Protein Homology CDS 184363 185175 . + 0 ID=cds-RUP96362.1;Parent=gene-D8M19_00875;Dbxref=NCBI_GP:RUP96362.1;Name=RUP96362.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118733.1;locus_tag=D8M19_00875;product=dihydropteroate synthase;protein_id=RUP96362.1;transl_table=11 RBLY01000001.1 Genbank gene 185193 186029 . + . ID=gene-D8M19_00880;Name=D8M19_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00880 RBLY01000001.1 Protein Homology CDS 185193 186029 . + 0 ID=cds-RUP96363.1;Parent=gene-D8M19_00880;Dbxref=NCBI_GP:RUP96363.1;Name=RUP96363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848542.1;locus_tag=D8M19_00880;product=glucosyl-3-phosphoglycerate synthase;protein_id=RUP96363.1;transl_table=11 RBLY01000001.1 Genbank gene 186091 186444 . + . ID=gene-D8M19_00885;Name=D8M19_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00885 RBLY01000001.1 Protein Homology CDS 186091 186444 . + 0 ID=cds-RUP96185.1;Parent=gene-D8M19_00885;Dbxref=NCBI_GP:RUP96185.1;Name=RUP96185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03544;locus_tag=D8M19_00885;product=DivIVA domain-containing protein;protein_id=RUP96185.1;transl_table=11 RBLY01000001.1 Genbank gene 186458 187339 . + . ID=gene-D8M19_00890;Name=D8M19_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00890 RBLY01000001.1 Protein Homology CDS 186458 187339 . + 0 ID=cds-RUP96186.1;Parent=gene-D8M19_00890;Dbxref=NCBI_GP:RUP96186.1;Name=RUP96186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119964.1;locus_tag=D8M19_00890;product=methyltransferase domain-containing protein;protein_id=RUP96186.1;transl_table=11 RBLY01000001.1 Genbank gene 187381 188856 . - . ID=gene-D8M19_00895;Name=D8M19_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00895 RBLY01000001.1 Protein Homology CDS 187381 188856 . - 0 ID=cds-RUP96187.1;Parent=gene-D8M19_00895;Dbxref=NCBI_GP:RUP96187.1;Name=RUP96187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323529.1;locus_tag=D8M19_00895;product=glycoside hydrolase family 32 protein;protein_id=RUP96187.1;transl_table=11 RBLY01000001.1 Genbank gene 188967 189596 . - . ID=gene-D8M19_00900;Name=D8M19_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00900 RBLY01000001.1 Protein Homology CDS 188967 189596 . - 0 ID=cds-RUP96188.1;Parent=gene-D8M19_00900;Dbxref=NCBI_GP:RUP96188.1;Name=RUP96188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119966.1;locus_tag=D8M19_00900;product=O-methyltransferase;protein_id=RUP96188.1;transl_table=11 RBLY01000001.1 Genbank gene 189916 190542 . + . ID=gene-D8M19_00905;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=D8M19_00905 RBLY01000001.1 Protein Homology CDS 189916 190542 . + 0 ID=cds-RUP96189.1;Parent=gene-D8M19_00905;Dbxref=NCBI_GP:RUP96189.1;Name=RUP96189.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366835.1;locus_tag=D8M19_00905;product=RNA polymerase sigma factor SigE;protein_id=RUP96189.1;transl_table=11 RBLY01000001.1 Genbank gene 190553 190987 . + . ID=gene-D8M19_00910;Name=D8M19_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00910 RBLY01000001.1 GeneMarkS+ CDS 190553 190987 . + 0 ID=cds-RUP96190.1;Parent=gene-D8M19_00910;Dbxref=NCBI_GP:RUP96190.1;Name=RUP96190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00910;product=zf-HC2 domain-containing protein;protein_id=RUP96190.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 191004 191330 . + . ID=gene-D8M19_00915;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=pseudogene;locus_tag=D8M19_00915;pseudo=true RBLY01000001.1 Protein Homology CDS 191004 191330 . + 0 ID=cds-D8M19_00915;Parent=gene-D8M19_00915;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=tatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119969.1;locus_tag=D8M19_00915;product=twin-arginine translocase subunit TatB;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 191639 192763 . - . ID=gene-D8M19_00920;Name=D8M19_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00920 RBLY01000001.1 Protein Homology CDS 191639 192763 . - 0 ID=cds-RUP96191.1;Parent=gene-D8M19_00920;Dbxref=NCBI_GP:RUP96191.1;Name=RUP96191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119970.1;locus_tag=D8M19_00920;product=MRP family ATP-binding protein;protein_id=RUP96191.1;transl_table=11 RBLY01000001.1 Genbank gene 192828 193574 . + . ID=gene-D8M19_00925;Name=D8M19_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00925 RBLY01000001.1 GeneMarkS+ CDS 192828 193574 . + 0 ID=cds-RUP96192.1;Parent=gene-D8M19_00925;Dbxref=NCBI_GP:RUP96192.1;Name=RUP96192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_00925;product=hypothetical protein;protein_id=RUP96192.1;transl_table=11 RBLY01000001.1 Genbank gene 193909 197697 . - . ID=gene-D8M19_00930;Name=D8M19_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00930 RBLY01000001.1 Protein Homology CDS 193909 197697 . - 0 ID=cds-RUP96193.1;Parent=gene-D8M19_00930;Dbxref=NCBI_GP:RUP96193.1;Name=RUP96193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119973.1;locus_tag=D8M19_00930;product=multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;protein_id=RUP96193.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 197911 199489 . + . ID=gene-D8M19_00935;Name=D8M19_00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_00935;pseudo=true RBLY01000001.1 Protein Homology CDS 197911 199489 . + 0 ID=cds-D8M19_00935;Parent=gene-D8M19_00935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119974.1;locus_tag=D8M19_00935;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 199514 200209 . + . ID=gene-D8M19_00940;Name=D8M19_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00940 RBLY01000001.1 Protein Homology CDS 199514 200209 . + 0 ID=cds-RUP96194.1;Parent=gene-D8M19_00940;Dbxref=NCBI_GP:RUP96194.1;Name=RUP96194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119975.1;locus_tag=D8M19_00940;product=hypothetical protein;protein_id=RUP96194.1;transl_table=11 RBLY01000001.1 Genbank gene 200271 200768 . - . ID=gene-D8M19_00945;Name=D8M19_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00945 RBLY01000001.1 Protein Homology CDS 200271 200768 . - 0 ID=cds-RUP96364.1;Parent=gene-D8M19_00945;Dbxref=NCBI_GP:RUP96364.1;Name=RUP96364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119976.1;locus_tag=D8M19_00945;product=hypothetical protein;protein_id=RUP96364.1;transl_table=11 RBLY01000001.1 Genbank gene 200899 202155 . + . ID=gene-D8M19_00950;Name=D8M19_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00950 RBLY01000001.1 Protein Homology CDS 200899 202155 . + 0 ID=cds-RUP96195.1;Parent=gene-D8M19_00950;Dbxref=NCBI_GP:RUP96195.1;Name=RUP96195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119977.1;locus_tag=D8M19_00950;product=MFS transporter;protein_id=RUP96195.1;transl_table=11 RBLY01000001.1 Genbank gene 202159 203097 . - . ID=gene-D8M19_00955;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=D8M19_00955 RBLY01000001.1 Protein Homology CDS 202159 203097 . - 0 ID=cds-RUP96196.1;Parent=gene-D8M19_00955;Dbxref=NCBI_GP:RUP96196.1;Name=RUP96196.1;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018302.1;locus_tag=D8M19_00955;product=formimidoylglutamase;protein_id=RUP96196.1;transl_table=11 RBLY01000001.1 Genbank gene 203233 205176 . + . ID=gene-D8M19_00960;Name=D8M19_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00960 RBLY01000001.1 Protein Homology CDS 203233 205176 . + 0 ID=cds-RUP96197.1;Parent=gene-D8M19_00960;Dbxref=NCBI_GP:RUP96197.1;Name=RUP96197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187165.1;locus_tag=D8M19_00960;product=DEAD/DEAH box helicase;protein_id=RUP96197.1;transl_table=11 RBLY01000001.1 Genbank gene 205335 205808 . - . ID=gene-D8M19_00965;Name=D8M19_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00965 RBLY01000001.1 Protein Homology CDS 205335 205808 . - 0 ID=cds-RUP96198.1;Parent=gene-D8M19_00965;Dbxref=NCBI_GP:RUP96198.1;Name=RUP96198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187164.1;locus_tag=D8M19_00965;product=DUF2269 domain-containing protein;protein_id=RUP96198.1;transl_table=11 RBLY01000001.1 Genbank gene 205877 206671 . - . ID=gene-D8M19_00970;Name=D8M19_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00970 RBLY01000001.1 Protein Homology CDS 205877 206671 . - 0 ID=cds-RUP96199.1;Parent=gene-D8M19_00970;Dbxref=NCBI_GP:RUP96199.1;Name=RUP96199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13395.4;locus_tag=D8M19_00970;product=HNH endonuclease;protein_id=RUP96199.1;transl_table=11 RBLY01000001.1 Genbank gene 206875 208446 . - . ID=gene-D8M19_00975;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=D8M19_00975 RBLY01000001.1 Protein Homology CDS 206875 208446 . - 0 ID=cds-RUP96200.1;Parent=gene-D8M19_00975;Dbxref=NCBI_GP:RUP96200.1;Name=RUP96200.1;gbkey=CDS;gene=putP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187160.1;locus_tag=D8M19_00975;product=sodium/proline symporter PutP;protein_id=RUP96200.1;transl_table=11 RBLY01000001.1 Genbank gene 208820 211924 . + . ID=gene-D8M19_00980;Name=D8M19_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00980 RBLY01000001.1 Protein Homology CDS 208820 211924 . + 0 ID=cds-RUP96201.1;Parent=gene-D8M19_00980;Dbxref=NCBI_GP:RUP96201.1;Name=RUP96201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848605.1;locus_tag=D8M19_00980;product=DEAD/DEAH box helicase;protein_id=RUP96201.1;transl_table=11 RBLY01000001.1 Genbank gene 211927 212799 . + . ID=gene-D8M19_00985;Name=D8M19_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00985 RBLY01000001.1 Protein Homology CDS 211927 212799 . + 0 ID=cds-RUP96202.1;Parent=gene-D8M19_00985;Dbxref=NCBI_GP:RUP96202.1;Name=RUP96202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119984.1;locus_tag=D8M19_00985;product=hypothetical protein;protein_id=RUP96202.1;transl_table=11 RBLY01000001.1 Genbank gene 212829 214019 . + . ID=gene-D8M19_00990;Name=D8M19_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00990 RBLY01000001.1 Protein Homology CDS 212829 214019 . + 0 ID=cds-RUP96203.1;Parent=gene-D8M19_00990;Dbxref=NCBI_GP:RUP96203.1;Name=RUP96203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119985.1;locus_tag=D8M19_00990;product=DNA repair exonuclease;protein_id=RUP96203.1;transl_table=11 RBLY01000001.1 Genbank gene 214016 216925 . + . ID=gene-D8M19_00995;Name=D8M19_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_00995 RBLY01000001.1 Protein Homology CDS 214016 216925 . + 0 ID=cds-RUP96204.1;Parent=gene-D8M19_00995;Dbxref=NCBI_GP:RUP96204.1;Name=RUP96204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13175.4;locus_tag=D8M19_00995;product=hypothetical protein;protein_id=RUP96204.1;transl_table=11 RBLY01000001.1 Genbank gene 217014 217535 . + . ID=gene-D8M19_01000;Name=D8M19_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01000 RBLY01000001.1 Protein Homology CDS 217014 217535 . + 0 ID=cds-RUP96365.1;Parent=gene-D8M19_01000;Dbxref=NCBI_GP:RUP96365.1;Name=RUP96365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119987.1;locus_tag=D8M19_01000;product=MarR family transcriptional regulator;protein_id=RUP96365.1;transl_table=11 RBLY01000001.1 Genbank gene 217625 217698 . - . ID=gene-D8M19_01005;Name=D8M19_01005;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_01005 RBLY01000001.1 tRNAscan-SE tRNA 217625 217698 . - . ID=rna-D8M19_01005;Parent=gene-D8M19_01005;anticodon=(pos:complement(217662..217664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01005;product=tRNA-Arg RBLY01000001.1 tRNAscan-SE exon 217625 217698 . - . ID=exon-D8M19_01005-1;Parent=rna-D8M19_01005;anticodon=(pos:complement(217662..217664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01005;product=tRNA-Arg RBLY01000001.1 Genbank gene 217796 219412 . - . ID=gene-D8M19_01010;Name=D8M19_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01010 RBLY01000001.1 Protein Homology CDS 217796 219412 . - 0 ID=cds-RUP96205.1;Parent=gene-D8M19_01010;Dbxref=NCBI_GP:RUP96205.1;Name=RUP96205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119988.1;locus_tag=D8M19_01010;product=alpha/beta fold hydrolase;protein_id=RUP96205.1;transl_table=11 RBLY01000001.1 Genbank gene 219592 221244 . + . ID=gene-D8M19_01015;Name=D8M19_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01015 RBLY01000001.1 Protein Homology CDS 219592 221244 . + 0 ID=cds-RUP96206.1;Parent=gene-D8M19_01015;Dbxref=NCBI_GP:RUP96206.1;Name=RUP96206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600405.1;locus_tag=D8M19_01015;product=arginine--tRNA ligase;protein_id=RUP96206.1;transl_table=11 RBLY01000001.1 Genbank gene 221249 222604 . + . ID=gene-D8M19_01020;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=D8M19_01020 RBLY01000001.1 Protein Homology CDS 221249 222604 . + 0 ID=cds-RUP96207.1;Parent=gene-D8M19_01020;Dbxref=NCBI_GP:RUP96207.1;Name=RUP96207.1;gbkey=CDS;gene=lysA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119990.1;locus_tag=D8M19_01020;product=diaminopimelate decarboxylase;protein_id=RUP96207.1;transl_table=11 RBLY01000001.1 Genbank gene 222818 224149 . + . ID=gene-D8M19_01025;Name=D8M19_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01025 RBLY01000001.1 Protein Homology CDS 222818 224149 . + 0 ID=cds-RUP96208.1;Parent=gene-D8M19_01025;Dbxref=NCBI_GP:RUP96208.1;Name=RUP96208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119991.1;locus_tag=D8M19_01025;product=homoserine dehydrogenase;protein_id=RUP96208.1;transl_table=11 RBLY01000001.1 Genbank gene 224174 225103 . + . ID=gene-D8M19_01030;Name=D8M19_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01030 RBLY01000001.1 Protein Homology CDS 224174 225103 . + 0 ID=cds-RUP96209.1;Parent=gene-D8M19_01030;Dbxref=NCBI_GP:RUP96209.1;Name=RUP96209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119992.1;locus_tag=D8M19_01030;product=homoserine kinase;protein_id=RUP96209.1;transl_table=11 RBLY01000001.1 Genbank gene 225268 227226 . - . ID=gene-D8M19_01035;Name=D8M19_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01035 RBLY01000001.1 Protein Homology CDS 225268 227226 . - 0 ID=cds-RUP96210.1;Parent=gene-D8M19_01035;Dbxref=NCBI_GP:RUP96210.1;Name=RUP96210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25%2CHMM:PF00528.20;locus_tag=D8M19_01035;product=ATP-binding cassette domain-containing protein;protein_id=RUP96210.1;transl_table=11 RBLY01000001.1 Genbank gene 227250 228071 . - . ID=gene-D8M19_01040;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=D8M19_01040 RBLY01000001.1 Protein Homology CDS 227250 228071 . - 0 ID=cds-RUP96211.1;Parent=gene-D8M19_01040;Dbxref=NCBI_GP:RUP96211.1;Name=RUP96211.1;gbkey=CDS;gene=modA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119994.1;locus_tag=D8M19_01040;product=molybdate ABC transporter substrate-binding protein;protein_id=RUP96211.1;transl_table=11 RBLY01000001.1 Genbank gene 228095 229048 . - . ID=gene-D8M19_01045;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=D8M19_01045 RBLY01000001.1 Protein Homology CDS 228095 229048 . - 0 ID=cds-RUP96212.1;Parent=gene-D8M19_01045;Dbxref=NCBI_GP:RUP96212.1;Name=RUP96212.1;gbkey=CDS;gene=fdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119995.1;locus_tag=D8M19_01045;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=RUP96212.1;transl_table=11 RBLY01000001.1 Genbank gene 229059 229424 . - . ID=gene-D8M19_01050;Name=D8M19_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01050 RBLY01000001.1 GeneMarkS+ CDS 229059 229424 . - 0 ID=cds-RUP96213.1;Parent=gene-D8M19_01050;Dbxref=NCBI_GP:RUP96213.1;Name=RUP96213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01050;product=hypothetical protein;protein_id=RUP96213.1;transl_table=11 RBLY01000001.1 Genbank gene 229517 229780 . - . ID=gene-D8M19_01055;Name=D8M19_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01055 RBLY01000001.1 Protein Homology CDS 229517 229780 . - 0 ID=cds-RUP96366.1;Parent=gene-D8M19_01055;Dbxref=NCBI_GP:RUP96366.1;Name=RUP96366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188351.1;locus_tag=D8M19_01055;product=MoaD/ThiS family protein;protein_id=RUP96366.1;transl_table=11 RBLY01000001.1 Genbank gene 229992 231314 . + . ID=gene-D8M19_01060;Name=D8M19_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01060 RBLY01000001.1 Protein Homology CDS 229992 231314 . + 0 ID=cds-RUP96214.1;Parent=gene-D8M19_01060;Dbxref=NCBI_GP:RUP96214.1;Name=RUP96214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399712.1;locus_tag=D8M19_01060;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP96214.1;transl_table=11 RBLY01000001.1 Genbank gene 231494 233035 . + . ID=gene-D8M19_01065;Name=D8M19_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01065 RBLY01000001.1 Protein Homology CDS 231494 233035 . + 0 ID=cds-RUP96215.1;Parent=gene-D8M19_01065;Dbxref=NCBI_GP:RUP96215.1;Name=RUP96215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119998.1;locus_tag=D8M19_01065;product=MFS transporter;protein_id=RUP96215.1;transl_table=11 RBLY01000001.1 Genbank gene 233171 233740 . + . ID=gene-D8M19_01070;Name=D8M19_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01070 RBLY01000001.1 Protein Homology CDS 233171 233740 . + 0 ID=cds-RUP96216.1;Parent=gene-D8M19_01070;Dbxref=NCBI_GP:RUP96216.1;Name=RUP96216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119999.1;locus_tag=D8M19_01070;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=RUP96216.1;transl_table=11 RBLY01000001.1 Genbank gene 233721 234221 . + . ID=gene-D8M19_01075;Name=D8M19_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01075 RBLY01000001.1 Protein Homology CDS 233721 234221 . + 0 ID=cds-RUP96217.1;Parent=gene-D8M19_01075;Dbxref=NCBI_GP:RUP96217.1;Name=RUP96217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600826.1;locus_tag=D8M19_01075;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=RUP96217.1;transl_table=11 RBLY01000001.1 Genbank gene 234280 235434 . + . ID=gene-D8M19_01080;Name=D8M19_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01080 RBLY01000001.1 Protein Homology CDS 234280 235434 . + 0 ID=cds-RUP96218.1;Parent=gene-D8M19_01080;Dbxref=NCBI_GP:RUP96218.1;Name=RUP96218.1;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120001.1;locus_tag=D8M19_01080;product=molybdopterin biosynthesis protein MoeB;protein_id=RUP96218.1;transl_table=11 RBLY01000001.1 Genbank gene 235499 236146 . - . ID=gene-D8M19_01085;Name=D8M19_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01085 RBLY01000001.1 Protein Homology CDS 235499 236146 . - 0 ID=cds-RUP96219.1;Parent=gene-D8M19_01085;Dbxref=NCBI_GP:RUP96219.1;Name=RUP96219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12804.5;locus_tag=D8M19_01085;product=molybdenum cofactor guanylyltransferase;protein_id=RUP96219.1;transl_table=11 RBLY01000001.1 Genbank gene 236175 236654 . - . ID=gene-D8M19_01090;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=D8M19_01090 RBLY01000001.1 Protein Homology CDS 236175 236654 . - 0 ID=cds-RUP96220.1;Parent=gene-D8M19_01090;Dbxref=NCBI_GP:RUP96220.1;Name=RUP96220.1;gbkey=CDS;gene=moaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062063.1;locus_tag=D8M19_01090;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=RUP96220.1;transl_table=11 RBLY01000001.1 Genbank gene 236679 238046 . - . ID=gene-D8M19_01095;Name=D8M19_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01095 RBLY01000001.1 Protein Homology CDS 236679 238046 . - 0 ID=cds-RUP96221.1;Parent=gene-D8M19_01095;Dbxref=NCBI_GP:RUP96221.1;Name=RUP96221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00994.22;locus_tag=D8M19_01095;product=molybdopterin molybdenumtransferase MoeA;protein_id=RUP96221.1;transl_table=11 RBLY01000001.1 Genbank gene 238062 239180 . - . ID=gene-D8M19_01100;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=D8M19_01100 RBLY01000001.1 Protein Homology CDS 238062 239180 . - 0 ID=cds-RUP96222.1;Parent=gene-D8M19_01100;Dbxref=NCBI_GP:RUP96222.1;Name=RUP96222.1;gbkey=CDS;gene=moaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120005.1;locus_tag=D8M19_01100;product=GTP 3'%2C8-cyclase MoaA;protein_id=RUP96222.1;transl_table=11 RBLY01000001.1 Genbank gene 239241 241028 . - . ID=gene-D8M19_01105;Name=D8M19_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01105 RBLY01000001.1 Protein Homology CDS 239241 241028 . - 0 ID=cds-RUP96367.1;Parent=gene-D8M19_01105;Dbxref=NCBI_GP:RUP96367.1;Name=RUP96367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187089.1;locus_tag=D8M19_01105;product=long-chain fatty-acid--CoA ligase;protein_id=RUP96367.1;transl_table=11 RBLY01000001.1 Genbank gene 241363 243651 . + . ID=gene-D8M19_01110;Name=D8M19_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01110 RBLY01000001.1 Protein Homology CDS 241363 243651 . + 0 ID=cds-RUP96368.1;Parent=gene-D8M19_01110;Dbxref=NCBI_GP:RUP96368.1;Name=RUP96368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120007.1;locus_tag=D8M19_01110;product=transcription termination factor Rho;protein_id=RUP96368.1;transl_table=11 RBLY01000001.1 Genbank gene 243655 244728 . + . ID=gene-D8M19_01115;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=D8M19_01115 RBLY01000001.1 Protein Homology CDS 243655 244728 . + 0 ID=cds-RUP96223.1;Parent=gene-D8M19_01115;Dbxref=NCBI_GP:RUP96223.1;Name=RUP96223.1;gbkey=CDS;gene=prfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187085.1;locus_tag=D8M19_01115;product=peptide chain release factor 1;protein_id=RUP96223.1;transl_table=11 RBLY01000001.1 Genbank gene 244774 245622 . + . ID=gene-D8M19_01120;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=D8M19_01120 RBLY01000001.1 Protein Homology CDS 244774 245622 . + 0 ID=cds-RUP96369.1;Parent=gene-D8M19_01120;Dbxref=NCBI_GP:RUP96369.1;Name=RUP96369.1;gbkey=CDS;gene=prmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120009.1;locus_tag=D8M19_01120;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=RUP96369.1;transl_table=11 RBLY01000001.1 Genbank gene 245757 246419 . + . ID=gene-D8M19_01125;Name=D8M19_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01125 RBLY01000001.1 Protein Homology CDS 245757 246419 . + 0 ID=cds-RUP96224.1;Parent=gene-D8M19_01125;Dbxref=NCBI_GP:RUP96224.1;Name=RUP96224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120010.1;locus_tag=D8M19_01125;product=threonylcarbamoyl-AMP synthase;protein_id=RUP96224.1;transl_table=11 RBLY01000001.1 Genbank gene 246419 247594 . + . ID=gene-D8M19_01130;Name=D8M19_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01130 RBLY01000001.1 Protein Homology CDS 246419 247594 . + 0 ID=cds-RUP96225.1;Parent=gene-D8M19_01130;Dbxref=NCBI_GP:RUP96225.1;Name=RUP96225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120011.1;locus_tag=D8M19_01130;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=RUP96225.1;transl_table=11 RBLY01000001.1 Genbank gene 247823 248206 . + . ID=gene-D8M19_01135;Name=D8M19_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01135 RBLY01000001.1 Protein Homology CDS 247823 248206 . + 0 ID=cds-RUP96370.1;Parent=gene-D8M19_01135;Dbxref=NCBI_GP:RUP96370.1;Name=RUP96370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848675.1;locus_tag=D8M19_01135;product=hypothetical protein;protein_id=RUP96370.1;transl_table=11 RBLY01000001.1 Genbank gene 248572 249375 . + . ID=gene-D8M19_01140;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=D8M19_01140 RBLY01000001.1 Protein Homology CDS 248572 249375 . + 0 ID=cds-RUP96226.1;Parent=gene-D8M19_01140;Dbxref=NCBI_GP:RUP96226.1;Name=RUP96226.1;gbkey=CDS;gene=atpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120013.1;locus_tag=D8M19_01140;product=ATP synthase F0 subunit A;protein_id=RUP96226.1;transl_table=11 RBLY01000001.1 Genbank gene 249470 249706 . + . ID=gene-D8M19_01145;Name=D8M19_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01145 RBLY01000001.1 Protein Homology CDS 249470 249706 . + 0 ID=cds-RUP96227.1;Parent=gene-D8M19_01145;Dbxref=NCBI_GP:RUP96227.1;Name=RUP96227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600432.1;locus_tag=D8M19_01145;product=ATP synthase F0 subunit C;protein_id=RUP96227.1;transl_table=11 RBLY01000001.1 Genbank gene 249752 250321 . + . ID=gene-D8M19_01150;Name=D8M19_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01150 RBLY01000001.1 Protein Homology CDS 249752 250321 . + 0 ID=cds-RUP96228.1;Parent=gene-D8M19_01150;Dbxref=NCBI_GP:RUP96228.1;Name=RUP96228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120015.1;locus_tag=D8M19_01150;product=F0F1 ATP synthase subunit B;protein_id=RUP96228.1;transl_table=11 RBLY01000001.1 Genbank gene 250328 251155 . + . ID=gene-D8M19_01155;Name=D8M19_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01155 RBLY01000001.1 Protein Homology CDS 250328 251155 . + 0 ID=cds-RUP96229.1;Parent=gene-D8M19_01155;Dbxref=NCBI_GP:RUP96229.1;Name=RUP96229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120016.1;locus_tag=D8M19_01155;product=F0F1 ATP synthase subunit delta;protein_id=RUP96229.1;transl_table=11 RBLY01000001.1 Genbank gene 251202 252875 . + . ID=gene-D8M19_01160;Name=D8M19_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01160 RBLY01000001.1 Protein Homology CDS 251202 252875 . + 0 ID=cds-RUP96230.1;Parent=gene-D8M19_01160;Dbxref=NCBI_GP:RUP96230.1;Name=RUP96230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580842.1;locus_tag=D8M19_01160;product=F0F1 ATP synthase subunit alpha;protein_id=RUP96230.1;transl_table=11 RBLY01000001.1 Genbank gene 252933 253907 . + . ID=gene-D8M19_01165;Name=D8M19_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01165 RBLY01000001.1 Protein Homology CDS 252933 253907 . + 0 ID=cds-RUP96231.1;Parent=gene-D8M19_01165;Dbxref=NCBI_GP:RUP96231.1;Name=RUP96231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120018.1;locus_tag=D8M19_01165;product=F0F1 ATP synthase subunit gamma;protein_id=RUP96231.1;transl_table=11 RBLY01000001.1 Genbank gene 253911 255362 . + . ID=gene-D8M19_01170;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=D8M19_01170 RBLY01000001.1 Protein Homology CDS 253911 255362 . + 0 ID=cds-RUP96232.1;Parent=gene-D8M19_01170;Dbxref=NCBI_GP:RUP96232.1;Name=RUP96232.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851105.1;locus_tag=D8M19_01170;product=F0F1 ATP synthase subunit beta;protein_id=RUP96232.1;transl_table=11 RBLY01000001.1 Genbank gene 255379 255750 . + . ID=gene-D8M19_01175;Name=D8M19_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01175 RBLY01000001.1 Protein Homology CDS 255379 255750 . + 0 ID=cds-RUP96233.1;Parent=gene-D8M19_01175;Dbxref=NCBI_GP:RUP96233.1;Name=RUP96233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120020.1;locus_tag=D8M19_01175;product=F0F1 ATP synthase subunit epsilon;protein_id=RUP96233.1;transl_table=11 RBLY01000001.1 Genbank gene 255920 256369 . + . ID=gene-D8M19_01180;Name=D8M19_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01180 RBLY01000001.1 Protein Homology CDS 255920 256369 . + 0 ID=cds-RUP96234.1;Parent=gene-D8M19_01180;Dbxref=NCBI_GP:RUP96234.1;Name=RUP96234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118671.1;locus_tag=D8M19_01180;product=DUF2550 family protein;protein_id=RUP96234.1;transl_table=11 RBLY01000001.1 Genbank gene 256380 257072 . + . ID=gene-D8M19_01185;Name=nucS;gbkey=Gene;gene=nucS;gene_biotype=protein_coding;locus_tag=D8M19_01185 RBLY01000001.1 Protein Homology CDS 256380 257072 . + 0 ID=cds-RUP96371.1;Parent=gene-D8M19_01185;Dbxref=NCBI_GP:RUP96371.1;Name=RUP96371.1;gbkey=CDS;gene=nucS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600440.1;locus_tag=D8M19_01185;product=endonuclease NucS;protein_id=RUP96371.1;transl_table=11 RBLY01000001.1 Genbank gene 257151 257393 . + . ID=gene-D8M19_01190;Name=D8M19_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01190 RBLY01000001.1 Protein Homology CDS 257151 257393 . + 0 ID=cds-RUP96372.1;Parent=gene-D8M19_01190;Dbxref=NCBI_GP:RUP96372.1;Name=RUP96372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_694646.1;locus_tag=D8M19_01190;product=hypothetical protein;protein_id=RUP96372.1;transl_table=11 RBLY01000001.1 Genbank gene 257440 257766 . + . ID=gene-D8M19_01195;Name=D8M19_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01195 RBLY01000001.1 Protein Homology CDS 257440 257766 . + 0 ID=cds-RUP96373.1;Parent=gene-D8M19_01195;Dbxref=NCBI_GP:RUP96373.1;Name=RUP96373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823364.1;locus_tag=D8M19_01195;product=thiamine-binding protein;protein_id=RUP96373.1;transl_table=11 RBLY01000001.1 Genbank gene 257888 258952 . + . ID=gene-D8M19_01200;Name=D8M19_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01200 RBLY01000001.1 Protein Homology CDS 257888 258952 . + 0 ID=cds-RUP96235.1;Parent=gene-D8M19_01200;Dbxref=NCBI_GP:RUP96235.1;Name=RUP96235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00085.18;locus_tag=D8M19_01200;product=co-chaperone YbbN;protein_id=RUP96235.1;transl_table=11 RBLY01000001.1 Genbank gene 259229 260080 . + . ID=gene-D8M19_01205;Name=D8M19_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01205 RBLY01000001.1 Protein Homology CDS 259229 260080 . + 0 ID=cds-RUP96236.1;Parent=gene-D8M19_01205;Dbxref=NCBI_GP:RUP96236.1;Name=RUP96236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848697.1;locus_tag=D8M19_01205;product=ABC transporter ATP-binding protein;protein_id=RUP96236.1;transl_table=11 RBLY01000001.1 Genbank gene 260097 260978 . + . ID=gene-D8M19_01210;Name=D8M19_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01210 RBLY01000001.1 Protein Homology CDS 260097 260978 . + 0 ID=cds-RUP96237.1;Parent=gene-D8M19_01210;Dbxref=NCBI_GP:RUP96237.1;Name=RUP96237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120027.1;locus_tag=D8M19_01210;product=NUDIX hydrolase;protein_id=RUP96237.1;transl_table=11 RBLY01000001.1 Genbank gene 261177 261980 . + . ID=gene-D8M19_01215;Name=D8M19_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01215 RBLY01000001.1 Protein Homology CDS 261177 261980 . + 0 ID=cds-RUP96374.1;Parent=gene-D8M19_01215;Dbxref=NCBI_GP:RUP96374.1;Name=RUP96374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848701.1;locus_tag=D8M19_01215;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=RUP96374.1;transl_table=11 RBLY01000001.1 Genbank gene 262008 262973 . + . ID=gene-D8M19_01220;Name=D8M19_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01220 RBLY01000001.1 Protein Homology CDS 262008 262973 . + 0 ID=cds-RUP96238.1;Parent=gene-D8M19_01220;Dbxref=NCBI_GP:RUP96238.1;Name=RUP96238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120029.1;locus_tag=D8M19_01220;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=RUP96238.1;transl_table=11 RBLY01000001.1 Genbank gene 263047 264168 . + . ID=gene-D8M19_01225;Name=D8M19_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01225 RBLY01000001.1 Protein Homology CDS 263047 264168 . + 0 ID=cds-RUP96239.1;Parent=gene-D8M19_01225;Dbxref=NCBI_GP:RUP96239.1;Name=RUP96239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120030.1;locus_tag=D8M19_01225;product=cysteine desulfurase;protein_id=RUP96239.1;transl_table=11 RBLY01000001.1 Genbank gene 264179 265018 . - . ID=gene-D8M19_01230;Name=D8M19_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01230 RBLY01000001.1 Protein Homology CDS 264179 265018 . - 0 ID=cds-RUP96240.1;Parent=gene-D8M19_01230;Dbxref=NCBI_GP:RUP96240.1;Name=RUP96240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120031.1;locus_tag=D8M19_01230;product=spermidine synthase;protein_id=RUP96240.1;transl_table=11 RBLY01000001.1 Genbank gene 265121 266212 . + . ID=gene-D8M19_01235;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=D8M19_01235 RBLY01000001.1 Protein Homology CDS 265121 266212 . + 0 ID=cds-RUP96241.1;Parent=gene-D8M19_01235;Dbxref=NCBI_GP:RUP96241.1;Name=RUP96241.1;gbkey=CDS;gene=mnmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187009.1;locus_tag=D8M19_01235;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=RUP96241.1;transl_table=11 RBLY01000001.1 Genbank gene 266233 267342 . + . ID=gene-D8M19_01240;Name=D8M19_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01240 RBLY01000001.1 GeneMarkS+ CDS 266233 267342 . + 0 ID=cds-RUP96242.1;Parent=gene-D8M19_01240;Dbxref=NCBI_GP:RUP96242.1;Name=RUP96242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01240;product=hypothetical protein;protein_id=RUP96242.1;transl_table=11 RBLY01000001.1 Genbank gene 267339 267614 . - . ID=gene-D8M19_01245;Name=D8M19_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01245 RBLY01000001.1 GeneMarkS+ CDS 267339 267614 . - 0 ID=cds-RUP96243.1;Parent=gene-D8M19_01245;Dbxref=NCBI_GP:RUP96243.1;Name=RUP96243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01245;product=hypothetical protein;protein_id=RUP96243.1;transl_table=11 RBLY01000001.1 Genbank gene 267614 268627 . - . ID=gene-D8M19_01250;Name=D8M19_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01250 RBLY01000001.1 Protein Homology CDS 267614 268627 . - 0 ID=cds-RUP96244.1;Parent=gene-D8M19_01250;Dbxref=NCBI_GP:RUP96244.1;Name=RUP96244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00144.22;locus_tag=D8M19_01250;product=class C beta-lactamase-related serine hydrolase;protein_id=RUP96244.1;transl_table=11 RBLY01000001.1 Genbank gene 268644 269315 . - . ID=gene-D8M19_01255;Name=D8M19_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01255 RBLY01000001.1 Protein Homology CDS 268644 269315 . - 0 ID=cds-RUP96245.1;Parent=gene-D8M19_01255;Dbxref=NCBI_GP:RUP96245.1;Name=RUP96245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120036.1;locus_tag=D8M19_01255;product=3'-5' exonuclease;protein_id=RUP96245.1;transl_table=11 RBLY01000001.1 Genbank gene 269398 271503 . + . ID=gene-D8M19_01260;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=D8M19_01260 RBLY01000001.1 Protein Homology CDS 269398 271503 . + 0 ID=cds-RUP96375.1;Parent=gene-D8M19_01260;Dbxref=NCBI_GP:RUP96375.1;Name=RUP96375.1;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848723.1;locus_tag=D8M19_01260;product=NAD-dependent DNA ligase LigA;protein_id=RUP96375.1;transl_table=11 RBLY01000001.1 Genbank gene 271500 272162 . - . ID=gene-D8M19_01265;Name=D8M19_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01265 RBLY01000001.1 Protein Homology CDS 271500 272162 . - 0 ID=cds-RUP96246.1;Parent=gene-D8M19_01265;Dbxref=NCBI_GP:RUP96246.1;Name=RUP96246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120038.1;locus_tag=D8M19_01265;product=amino acid-binding ACT domain protein;protein_id=RUP96246.1;transl_table=11 RBLY01000001.1 Genbank gene 272359 272649 . + . ID=gene-D8M19_01270;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=D8M19_01270 RBLY01000001.1 Protein Homology CDS 272359 272649 . + 0 ID=cds-RUP96247.1;Parent=gene-D8M19_01270;Dbxref=NCBI_GP:RUP96247.1;Name=RUP96247.1;gbkey=CDS;gene=gatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280231.1;locus_tag=D8M19_01270;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=RUP96247.1;transl_table=11 RBLY01000001.1 Genbank gene 272710 274197 . + . ID=gene-D8M19_01275;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=D8M19_01275 RBLY01000001.1 Protein Homology CDS 272710 274197 . + 0 ID=cds-RUP96248.1;Parent=gene-D8M19_01275;Dbxref=NCBI_GP:RUP96248.1;Name=RUP96248.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120040.1;locus_tag=D8M19_01275;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=RUP96248.1;transl_table=11 RBLY01000001.1 Genbank gene 274266 274589 . - . ID=gene-D8M19_01280;Name=D8M19_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01280 RBLY01000001.1 Protein Homology CDS 274266 274589 . - 0 ID=cds-RUP96249.1;Parent=gene-D8M19_01280;Dbxref=NCBI_GP:RUP96249.1;Name=RUP96249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532119.1;locus_tag=D8M19_01280;product=hypothetical protein;protein_id=RUP96249.1;transl_table=11 RBLY01000001.1 Genbank gene 274698 276068 . + . ID=gene-D8M19_01285;Name=D8M19_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01285 RBLY01000001.1 Protein Homology CDS 274698 276068 . + 0 ID=cds-RUP96376.1;Parent=gene-D8M19_01285;Dbxref=NCBI_GP:RUP96376.1;Name=RUP96376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848736.1;locus_tag=D8M19_01285;product=DHA2 family efflux MFS transporter permease subunit;protein_id=RUP96376.1;transl_table=11 RBLY01000001.1 Genbank gene 276185 277216 . + . ID=gene-D8M19_01290;Name=D8M19_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01290 RBLY01000001.1 Protein Homology CDS 276185 277216 . + 0 ID=cds-RUP96250.1;Parent=gene-D8M19_01290;Dbxref=NCBI_GP:RUP96250.1;Name=RUP96250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327686.1;locus_tag=D8M19_01290;product=ATP-dependent 6-phosphofructokinase;protein_id=RUP96250.1;transl_table=11 RBLY01000001.1 Genbank gene 277275 278783 . + . ID=gene-D8M19_01295;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=D8M19_01295 RBLY01000001.1 Protein Homology CDS 277275 278783 . + 0 ID=cds-RUP96377.1;Parent=gene-D8M19_01295;Dbxref=NCBI_GP:RUP96377.1;Name=RUP96377.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769315.1;locus_tag=D8M19_01295;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=RUP96377.1;transl_table=11 RBLY01000001.1 Genbank gene 278877 280289 . + . ID=gene-D8M19_01300;Name=D8M19_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01300 RBLY01000001.1 Protein Homology CDS 278877 280289 . + 0 ID=cds-RUP96251.1;Parent=gene-D8M19_01300;Dbxref=NCBI_GP:RUP96251.1;Name=RUP96251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120045.1;locus_tag=D8M19_01300;product=hypothetical protein;protein_id=RUP96251.1;transl_table=11 RBLY01000001.1 Genbank gene 280319 281413 . - . ID=gene-D8M19_01305;Name=D8M19_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01305 RBLY01000001.1 Protein Homology CDS 280319 281413 . - 0 ID=cds-RUP96252.1;Parent=gene-D8M19_01305;Dbxref=NCBI_GP:RUP96252.1;Name=RUP96252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600487.1;locus_tag=D8M19_01305;product=glutathione-dependent reductase;protein_id=RUP96252.1;transl_table=11 RBLY01000001.1 Genbank gene 281526 282293 . + . ID=gene-D8M19_01310;Name=D8M19_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01310 RBLY01000001.1 Protein Homology CDS 281526 282293 . + 0 ID=cds-RUP96253.1;Parent=gene-D8M19_01310;Dbxref=NCBI_GP:RUP96253.1;Name=RUP96253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118637.1;locus_tag=D8M19_01310;product=HNH endonuclease;protein_id=RUP96253.1;transl_table=11 RBLY01000001.1 Genbank gene 282360 283553 . + . ID=gene-D8M19_01315;Name=D8M19_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01315 RBLY01000001.1 Protein Homology CDS 282360 283553 . + 0 ID=cds-RUP96254.1;Parent=gene-D8M19_01315;Dbxref=NCBI_GP:RUP96254.1;Name=RUP96254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07681.10;locus_tag=D8M19_01315;product=DoxX family membrane protein;protein_id=RUP96254.1;transl_table=11 RBLY01000001.1 Genbank gene 283550 284806 . - . ID=gene-D8M19_01320;Name=D8M19_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01320 RBLY01000001.1 Protein Homology CDS 283550 284806 . - 0 ID=cds-RUP96378.1;Parent=gene-D8M19_01320;Dbxref=NCBI_GP:RUP96378.1;Name=RUP96378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120049.1;locus_tag=D8M19_01320;product=DUF2029 domain-containing protein;protein_id=RUP96378.1;transl_table=11 RBLY01000001.1 Genbank gene 284841 286682 . - . ID=gene-D8M19_01325;Name=D8M19_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01325 RBLY01000001.1 Protein Homology CDS 284841 286682 . - 0 ID=cds-RUP96255.1;Parent=gene-D8M19_01325;Dbxref=NCBI_GP:RUP96255.1;Name=RUP96255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005523080.1;locus_tag=D8M19_01325;product=dihydroxy-acid dehydratase;protein_id=RUP96255.1;transl_table=11 RBLY01000001.1 Genbank gene 286749 287399 . - . ID=gene-D8M19_01330;Name=D8M19_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01330 RBLY01000001.1 Protein Homology CDS 286749 287399 . - 0 ID=cds-RUP96256.1;Parent=gene-D8M19_01330;Dbxref=NCBI_GP:RUP96256.1;Name=RUP96256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120051.1;locus_tag=D8M19_01330;product=PH domain-containing protein;protein_id=RUP96256.1;transl_table=11 RBLY01000001.1 Genbank gene 287423 288655 . - . ID=gene-D8M19_01335;Name=D8M19_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01335 RBLY01000001.1 Protein Homology CDS 287423 288655 . - 0 ID=cds-RUP96257.1;Parent=gene-D8M19_01335;Dbxref=NCBI_GP:RUP96257.1;Name=RUP96257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366909.1;locus_tag=D8M19_01335;product=mechanosensitive ion channel family protein;protein_id=RUP96257.1;transl_table=11 RBLY01000001.1 Genbank gene 288971 290842 . + . ID=gene-D8M19_01340;Name=D8M19_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01340 RBLY01000001.1 Protein Homology CDS 288971 290842 . + 0 ID=cds-RUP96258.1;Parent=gene-D8M19_01340;Dbxref=NCBI_GP:RUP96258.1;Name=RUP96258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295732.1;locus_tag=D8M19_01340;product=acetolactate synthase large subunit;protein_id=RUP96258.1;transl_table=11 RBLY01000001.1 Genbank gene 290845 291360 . + . ID=gene-D8M19_01345;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=D8M19_01345 RBLY01000001.1 Protein Homology CDS 290845 291360 . + 0 ID=cds-RUP96259.1;Parent=gene-D8M19_01345;Dbxref=NCBI_GP:RUP96259.1;Name=RUP96259.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120054.1;locus_tag=D8M19_01345;product=acetolactate synthase small subunit;protein_id=RUP96259.1;transl_table=11 RBLY01000001.1 Genbank gene 291466 292479 . + . ID=gene-D8M19_01350;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=D8M19_01350 RBLY01000001.1 Protein Homology CDS 291466 292479 . + 0 ID=cds-RUP96260.1;Parent=gene-D8M19_01350;Dbxref=NCBI_GP:RUP96260.1;Name=RUP96260.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400720.1;locus_tag=D8M19_01350;product=ketol-acid reductoisomerase;protein_id=RUP96260.1;transl_table=11 RBLY01000001.1 Genbank gene 292466 293416 . + . ID=gene-D8M19_01355;Name=D8M19_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01355 RBLY01000001.1 GeneMarkS+ CDS 292466 293416 . + 0 ID=cds-RUP96261.1;Parent=gene-D8M19_01355;Dbxref=NCBI_GP:RUP96261.1;Name=RUP96261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01355;product=hypothetical protein;protein_id=RUP96261.1;transl_table=11 RBLY01000001.1 Genbank gene 293541 295127 . + . ID=gene-D8M19_01360;Name=D8M19_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01360 RBLY01000001.1 Protein Homology CDS 293541 295127 . + 0 ID=cds-RUP96262.1;Parent=gene-D8M19_01360;Dbxref=NCBI_GP:RUP96262.1;Name=RUP96262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600506.1;locus_tag=D8M19_01360;product=phosphoglycerate dehydrogenase;protein_id=RUP96262.1;transl_table=11 RBLY01000001.1 Genbank gene 295233 296486 . - . ID=gene-D8M19_01365;Name=D8M19_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01365 RBLY01000001.1 Protein Homology CDS 295233 296486 . - 0 ID=cds-RUP96263.1;Parent=gene-D8M19_01365;Dbxref=NCBI_GP:RUP96263.1;Name=RUP96263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284110.1;locus_tag=D8M19_01365;product=8-amino-7-oxononanoate synthase;protein_id=RUP96263.1;transl_table=11 RBLY01000001.1 Genbank gene 296483 297208 . - . ID=gene-D8M19_01370;Name=D8M19_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01370 RBLY01000001.1 Protein Homology CDS 296483 297208 . - 0 ID=cds-RUP96264.1;Parent=gene-D8M19_01370;Dbxref=NCBI_GP:RUP96264.1;Name=RUP96264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PRK01322.1;locus_tag=D8M19_01370;product=6-carboxyhexanoate--CoA ligase;protein_id=RUP96264.1;transl_table=11 RBLY01000001.1 Genbank gene 297341 298183 . + . ID=gene-D8M19_01375;Name=D8M19_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01375 RBLY01000001.1 GeneMarkS+ CDS 297341 298183 . + 0 ID=cds-RUP96265.1;Parent=gene-D8M19_01375;Dbxref=NCBI_GP:RUP96265.1;Name=RUP96265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01375;product=hypothetical protein;protein_id=RUP96265.1;transl_table=11 RBLY01000001.1 Genbank gene 298278 299297 . + . ID=gene-D8M19_01380;Name=D8M19_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01380 RBLY01000001.1 Protein Homology CDS 298278 299297 . + 0 ID=cds-RUP96379.1;Parent=gene-D8M19_01380;Dbxref=NCBI_GP:RUP96379.1;Name=RUP96379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186893.1;locus_tag=D8M19_01380;product=3-isopropylmalate dehydrogenase;protein_id=RUP96379.1;transl_table=11 RBLY01000001.1 Genbank gene 299524 301080 . + . ID=gene-D8M19_01385;Name=D8M19_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01385 RBLY01000001.1 Protein Homology CDS 299524 301080 . + 0 ID=cds-RUP96380.1;Parent=gene-D8M19_01385;Dbxref=NCBI_GP:RUP96380.1;Name=RUP96380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020384664.1;locus_tag=D8M19_01385;product=cell wall-binding repeat-containing protein;protein_id=RUP96380.1;transl_table=11 RBLY01000001.1 Genbank gene 301156 303021 . + . ID=gene-D8M19_01390;Name=D8M19_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01390 RBLY01000001.1 Protein Homology CDS 301156 303021 . + 0 ID=cds-RUP96266.1;Parent=gene-D8M19_01390;Dbxref=NCBI_GP:RUP96266.1;Name=RUP96266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120063.1;locus_tag=D8M19_01390;product=cyclic nucleotide-binding/CBS domain-containing protein;protein_id=RUP96266.1;transl_table=11 RBLY01000001.1 Genbank gene 303038 303688 . + . ID=gene-D8M19_01395;Name=D8M19_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01395 RBLY01000001.1 Protein Homology CDS 303038 303688 . + 0 ID=cds-RUP96267.1;Parent=gene-D8M19_01395;Dbxref=NCBI_GP:RUP96267.1;Name=RUP96267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120064.1;locus_tag=D8M19_01395;product=3'-5' exonuclease;protein_id=RUP96267.1;transl_table=11 RBLY01000001.1 Genbank gene 303722 304516 . + . ID=gene-D8M19_01400;Name=D8M19_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01400 RBLY01000001.1 Protein Homology CDS 303722 304516 . + 0 ID=cds-RUP96268.1;Parent=gene-D8M19_01400;Dbxref=NCBI_GP:RUP96268.1;Name=RUP96268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600512.1;locus_tag=D8M19_01400;product=FAA hydrolase family protein;protein_id=RUP96268.1;transl_table=11 RBLY01000001.1 Genbank gene 304587 305684 . - . ID=gene-D8M19_01405;Name=D8M19_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01405 RBLY01000001.1 Protein Homology CDS 304587 305684 . - 0 ID=cds-RUP96382.1;Parent=gene-D8M19_01405;Dbxref=NCBI_GP:RUP96382.1;Name=RUP96382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323318.1;locus_tag=D8M19_01405;product=isochorismate synthase;protein_id=RUP96382.1;transl_table=11 RBLY01000001.1 Genbank gene 305743 307233 . + . ID=gene-D8M19_01410;Name=D8M19_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01410 RBLY01000001.1 Protein Homology CDS 305743 307233 . + 0 ID=cds-RUP96381.1;Parent=gene-D8M19_01410;Dbxref=NCBI_GP:RUP96381.1;Name=RUP96381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400739.1;locus_tag=D8M19_01410;product=glutamate--tRNA ligase;protein_id=RUP96381.1;transl_table=11 RBLY01000001.1 Genbank gene 307498 307569 . + . ID=gene-D8M19_01415;Name=D8M19_01415;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_01415 RBLY01000001.1 tRNAscan-SE tRNA 307498 307569 . + . ID=rna-D8M19_01415;Parent=gene-D8M19_01415;anticodon=(pos:307531..307533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01415;product=tRNA-Gln RBLY01000001.1 tRNAscan-SE exon 307498 307569 . + . ID=exon-D8M19_01415-1;Parent=rna-D8M19_01415;anticodon=(pos:307531..307533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01415;product=tRNA-Gln RBLY01000001.1 Genbank gene 307603 307678 . + . ID=gene-D8M19_01420;Name=D8M19_01420;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_01420 RBLY01000001.1 tRNAscan-SE tRNA 307603 307678 . + . ID=rna-D8M19_01420;Parent=gene-D8M19_01420;anticodon=(pos:307637..307639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01420;product=tRNA-Glu RBLY01000001.1 tRNAscan-SE exon 307603 307678 . + . ID=exon-D8M19_01420-1;Parent=rna-D8M19_01420;anticodon=(pos:307637..307639);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01420;product=tRNA-Glu RBLY01000001.1 Genbank gene 307746 308039 . + . ID=gene-D8M19_01425;Name=D8M19_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01425 RBLY01000001.1 GeneMarkS+ CDS 307746 308039 . + 0 ID=cds-RUP96269.1;Parent=gene-D8M19_01425;Dbxref=NCBI_GP:RUP96269.1;Name=RUP96269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01425;product=hypothetical protein;protein_id=RUP96269.1;transl_table=11 RBLY01000001.1 Genbank gene 308189 309073 . + . ID=gene-D8M19_01430;Name=D8M19_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01430 RBLY01000001.1 Protein Homology CDS 308189 309073 . + 0 ID=cds-RUP96270.1;Parent=gene-D8M19_01430;Dbxref=NCBI_GP:RUP96270.1;Name=RUP96270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00657.20;locus_tag=D8M19_01430;product=hypothetical protein;protein_id=RUP96270.1;transl_table=11 RBLY01000001.1 Genbank gene 309085 310002 . + . ID=gene-D8M19_01435;Name=D8M19_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01435 RBLY01000001.1 Protein Homology CDS 309085 310002 . + 0 ID=cds-RUP96271.1;Parent=gene-D8M19_01435;Dbxref=NCBI_GP:RUP96271.1;Name=RUP96271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278132.1;locus_tag=D8M19_01435;product=DMT family transporter;protein_id=RUP96271.1;transl_table=11 RBLY01000001.1 Genbank gene 310018 311259 . - . ID=gene-D8M19_01440;Name=D8M19_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01440 RBLY01000001.1 Protein Homology CDS 310018 311259 . - 0 ID=cds-RUP96272.1;Parent=gene-D8M19_01440;Dbxref=NCBI_GP:RUP96272.1;Name=RUP96272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296379.1;locus_tag=D8M19_01440;product=acetyl-CoA C-acyltransferase;protein_id=RUP96272.1;transl_table=11 RBLY01000001.1 Genbank gene 311490 312863 . + . ID=gene-D8M19_01445;Name=D8M19_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01445 RBLY01000001.1 Protein Homology CDS 311490 312863 . + 0 ID=cds-RUP96273.1;Parent=gene-D8M19_01445;Dbxref=NCBI_GP:RUP96273.1;Name=RUP96273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278141.1;locus_tag=D8M19_01445;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=RUP96273.1;transl_table=11 RBLY01000001.1 Genbank gene 312944 314467 . - . ID=gene-D8M19_01450;Name=D8M19_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01450 RBLY01000001.1 Protein Homology CDS 312944 314467 . - 0 ID=cds-RUP96383.1;Parent=gene-D8M19_01450;Dbxref=NCBI_GP:RUP96383.1;Name=RUP96383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599865.1;locus_tag=D8M19_01450;product=deoxyribodipyrimidine photo-lyase;protein_id=RUP96383.1;transl_table=11 RBLY01000001.1 Genbank gene 314537 315238 . - . ID=gene-D8M19_01455;Name=D8M19_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01455 RBLY01000001.1 Protein Homology CDS 314537 315238 . - 0 ID=cds-RUP96274.1;Parent=gene-D8M19_01455;Dbxref=NCBI_GP:RUP96274.1;Name=RUP96274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282586.1;locus_tag=D8M19_01455;product=IclR family transcriptional regulator;protein_id=RUP96274.1;transl_table=11 RBLY01000001.1 Genbank gene 315289 316701 . + . ID=gene-D8M19_01460;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=D8M19_01460 RBLY01000001.1 Protein Homology CDS 315289 316701 . + 0 ID=cds-RUP96275.1;Parent=gene-D8M19_01460;Dbxref=NCBI_GP:RUP96275.1;Name=RUP96275.1;gbkey=CDS;gene=leuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186857.1;locus_tag=D8M19_01460;product=3-isopropylmalate dehydratase large subunit;protein_id=RUP96275.1;transl_table=11 RBLY01000001.1 Genbank gene 316733 317323 . + . ID=gene-D8M19_01465;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=D8M19_01465 RBLY01000001.1 Protein Homology CDS 316733 317323 . + 0 ID=cds-RUP96276.1;Parent=gene-D8M19_01465;Dbxref=NCBI_GP:RUP96276.1;Name=RUP96276.1;gbkey=CDS;gene=leuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296962.1;locus_tag=D8M19_01465;product=3-isopropylmalate dehydratase small subunit;protein_id=RUP96276.1;transl_table=11 RBLY01000001.1 Genbank gene 317320 318297 . - . ID=gene-D8M19_01470;Name=D8M19_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01470 RBLY01000001.1 Protein Homology CDS 317320 318297 . - 0 ID=cds-RUP96277.1;Parent=gene-D8M19_01470;Dbxref=NCBI_GP:RUP96277.1;Name=RUP96277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848879.1;locus_tag=D8M19_01470;product=NUDIX hydrolase;protein_id=RUP96277.1;transl_table=11 RBLY01000001.1 Genbank gene 318406 319398 . + . ID=gene-D8M19_01475;Name=D8M19_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01475 RBLY01000001.1 Protein Homology CDS 318406 319398 . + 0 ID=cds-RUP96278.1;Parent=gene-D8M19_01475;Dbxref=NCBI_GP:RUP96278.1;Name=RUP96278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120078.1;locus_tag=D8M19_01475;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=RUP96278.1;transl_table=11 RBLY01000001.1 Genbank gene 319447 320508 . + . ID=gene-D8M19_01480;Name=D8M19_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01480 RBLY01000001.1 Protein Homology CDS 319447 320508 . + 0 ID=cds-RUP96279.1;Parent=gene-D8M19_01480;Dbxref=NCBI_GP:RUP96279.1;Name=RUP96279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323299.1;locus_tag=D8M19_01480;product=D-alanine--D-alanine ligase;protein_id=RUP96279.1;transl_table=11 RBLY01000001.1 Genbank gene 320611 321690 . - . ID=gene-D8M19_01485;Name=D8M19_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01485 RBLY01000001.1 Protein Homology CDS 320611 321690 . - 0 ID=cds-RUP96384.1;Parent=gene-D8M19_01485;Dbxref=NCBI_GP:RUP96384.1;Name=RUP96384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769396.1;locus_tag=D8M19_01485;product=DUF3515 domain-containing protein;protein_id=RUP96384.1;transl_table=11 RBLY01000001.1 Genbank gene 321819 322841 . + . ID=gene-D8M19_01490;Name=D8M19_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01490 RBLY01000001.1 Protein Homology CDS 321819 322841 . + 0 ID=cds-RUP96280.1;Parent=gene-D8M19_01490;Dbxref=NCBI_GP:RUP96280.1;Name=RUP96280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120081.1;locus_tag=D8M19_01490;product=thiamine-phosphate kinase;protein_id=RUP96280.1;transl_table=11 RBLY01000001.1 Genbank gene 322946 323584 . + . ID=gene-D8M19_01495;Name=D8M19_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01495 RBLY01000001.1 Protein Homology CDS 322946 323584 . + 0 ID=cds-RUP96385.1;Parent=gene-D8M19_01495;Dbxref=NCBI_GP:RUP96385.1;Name=RUP96385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022507.1;locus_tag=D8M19_01495;product=uracil-DNA glycosylase;protein_id=RUP96385.1;transl_table=11 RBLY01000001.1 Genbank gene 323604 325325 . + . ID=gene-D8M19_01500;Name=D8M19_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01500 RBLY01000001.1 Protein Homology CDS 323604 325325 . + 0 ID=cds-RUP96281.1;Parent=gene-D8M19_01500;Dbxref=NCBI_GP:RUP96281.1;Name=RUP96281.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02734.15%2CHMM:PF13684.4;locus_tag=D8M19_01500;product=DAK2 domain-containing protein;protein_id=RUP96281.1;transl_table=11 RBLY01000001.1 Genbank gene 325327 327567 . + . ID=gene-D8M19_01505;Name=D8M19_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01505 RBLY01000001.1 Protein Homology CDS 325327 327567 . + 0 ID=cds-RUP96282.1;Parent=gene-D8M19_01505;Dbxref=NCBI_GP:RUP96282.1;Name=RUP96282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04851.13;locus_tag=D8M19_01505;product=ATP-dependent DNA helicase RecG;protein_id=RUP96282.1;transl_table=11 RBLY01000001.1 Genbank gene 327615 328196 . + . ID=gene-D8M19_01510;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=D8M19_01510 RBLY01000001.1 Protein Homology CDS 327615 328196 . + 0 ID=cds-RUP96283.1;Parent=gene-D8M19_01510;Dbxref=NCBI_GP:RUP96283.1;Name=RUP96283.1;gbkey=CDS;gene=rsmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282635.1;locus_tag=D8M19_01510;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=RUP96283.1;transl_table=11 RBLY01000001.1 Genbank gene 328295 328792 . + . ID=gene-D8M19_01515;Name=D8M19_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01515 RBLY01000001.1 Protein Homology CDS 328295 328792 . + 0 ID=cds-RUP96284.1;Parent=gene-D8M19_01515;Dbxref=NCBI_GP:RUP96284.1;Name=RUP96284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120086.1;locus_tag=D8M19_01515;product=pantetheine-phosphate adenylyltransferase;protein_id=RUP96284.1;transl_table=11 RBLY01000001.1 Genbank gene 328789 329619 . - . ID=gene-D8M19_01520;Name=D8M19_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01520 RBLY01000001.1 Protein Homology CDS 328789 329619 . - 0 ID=cds-RUP96285.1;Parent=gene-D8M19_01520;Dbxref=NCBI_GP:RUP96285.1;Name=RUP96285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190115.1;locus_tag=D8M19_01520;product=DUF368 domain-containing protein;protein_id=RUP96285.1;transl_table=11 RBLY01000001.1 Genbank gene 329775 329851 . + . ID=gene-D8M19_01525;Name=D8M19_01525;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_01525 RBLY01000001.1 tRNAscan-SE tRNA 329775 329851 . + . ID=rna-D8M19_01525;Parent=gene-D8M19_01525;anticodon=(pos:329809..329811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01525;product=tRNA-Leu RBLY01000001.1 tRNAscan-SE exon 329775 329851 . + . ID=exon-D8M19_01525-1;Parent=rna-D8M19_01525;anticodon=(pos:329809..329811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01525;product=tRNA-Leu RBLY01000001.1 Genbank gene 330555 330839 . - . ID=gene-D8M19_01530;Name=D8M19_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01530 RBLY01000001.1 Protein Homology CDS 330555 330839 . - 0 ID=cds-RUP96286.1;Parent=gene-D8M19_01530;Dbxref=NCBI_GP:RUP96286.1;Name=RUP96286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303105.1;locus_tag=D8M19_01530;product=hypothetical protein;protein_id=RUP96286.1;transl_table=11 RBLY01000001.1 Genbank gene 331063 331353 . - . ID=gene-D8M19_01535;Name=D8M19_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01535 RBLY01000001.1 Protein Homology CDS 331063 331353 . - 0 ID=cds-RUP96287.1;Parent=gene-D8M19_01535;Dbxref=NCBI_GP:RUP96287.1;Name=RUP96287.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M19_01535;product=hypothetical protein;protein_id=RUP96287.1;transl_table=11 RBLY01000001.1 Genbank gene 331358 331600 . - . ID=gene-D8M19_01540;Name=D8M19_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01540 RBLY01000001.1 Protein Homology CDS 331358 331600 . - 0 ID=cds-RUP96288.1;Parent=gene-D8M19_01540;Dbxref=NCBI_GP:RUP96288.1;Name=RUP96288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M19_01540;product=hypothetical protein;protein_id=RUP96288.1;transl_table=11 RBLY01000001.1 Genbank gene 331570 332088 . - . ID=gene-D8M19_01545;Name=D8M19_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01545 RBLY01000001.1 Protein Homology CDS 331570 332088 . - 0 ID=cds-RUP96289.1;Parent=gene-D8M19_01545;Dbxref=NCBI_GP:RUP96289.1;Name=RUP96289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00665.24;locus_tag=D8M19_01545;product=hypothetical protein;protein_id=RUP96289.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 332092 332403 . - . ID=gene-D8M19_01550;Name=D8M19_01550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01550;pseudo=true RBLY01000001.1 Protein Homology CDS 332092 332403 . - 0 ID=cds-D8M19_01550;Parent=gene-D8M19_01550;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528085.1;locus_tag=D8M19_01550;product=transposase;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 332648 332956 . + . ID=gene-D8M19_01555;Name=D8M19_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01555 RBLY01000001.1 GeneMarkS+ CDS 332648 332956 . + 0 ID=cds-RUP96290.1;Parent=gene-D8M19_01555;Dbxref=NCBI_GP:RUP96290.1;Name=RUP96290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01555;product=hypothetical protein;protein_id=RUP96290.1;transl_table=11 RBLY01000001.1 Genbank gene 333080 333679 . + . ID=gene-D8M19_01560;Name=D8M19_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01560 RBLY01000001.1 GeneMarkS+ CDS 333080 333679 . + 0 ID=cds-RUP96291.1;Parent=gene-D8M19_01560;Dbxref=NCBI_GP:RUP96291.1;Name=RUP96291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01560;product=hypothetical protein;protein_id=RUP96291.1;transl_table=11 RBLY01000001.1 Genbank gene 333774 334064 . + . ID=gene-D8M19_01565;Name=D8M19_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01565 RBLY01000001.1 GeneMarkS+ CDS 333774 334064 . + 0 ID=cds-RUP96292.1;Parent=gene-D8M19_01565;Dbxref=NCBI_GP:RUP96292.1;Name=RUP96292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01565;product=hypothetical protein;protein_id=RUP96292.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 334519 334890 . + . ID=gene-D8M19_01570;Name=D8M19_01570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01570;pseudo=true RBLY01000001.1 Protein Homology CDS 334519 334890 . + 0 ID=cds-D8M19_01570;Parent=gene-D8M19_01570;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120096.1;locus_tag=D8M19_01570;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 334932 335159 . - . ID=gene-D8M19_01575;Name=D8M19_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01575 RBLY01000001.1 Protein Homology CDS 334932 335159 . - 0 ID=cds-RUP96293.1;Parent=gene-D8M19_01575;Dbxref=NCBI_GP:RUP96293.1;Name=RUP96293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M19_01575;product=hypothetical protein;protein_id=RUP96293.1;transl_table=11 RBLY01000001.1 Genbank gene 335533 335760 . - . ID=gene-D8M19_01580;Name=D8M19_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01580 RBLY01000001.1 Protein Homology CDS 335533 335760 . - 0 ID=cds-RUP96294.1;Parent=gene-D8M19_01580;Dbxref=NCBI_GP:RUP96294.1;Name=RUP96294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M19_01580;product=hypothetical protein;protein_id=RUP96294.1;transl_table=11 RBLY01000001.1 Genbank gene 336264 336626 . + . ID=gene-D8M19_01585;Name=D8M19_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01585 RBLY01000001.1 Protein Homology CDS 336264 336626 . + 0 ID=cds-RUP96295.1;Parent=gene-D8M19_01585;Dbxref=NCBI_GP:RUP96295.1;Name=RUP96295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120089.1;locus_tag=D8M19_01585;product=hypothetical protein;protein_id=RUP96295.1;transl_table=11 RBLY01000001.1 Genbank gene 336778 337623 . - . ID=gene-D8M19_01590;Name=D8M19_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01590 RBLY01000001.1 Protein Homology CDS 336778 337623 . - 0 ID=cds-RUP96296.1;Parent=gene-D8M19_01590;Dbxref=NCBI_GP:RUP96296.1;Name=RUP96296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11236.6;locus_tag=D8M19_01590;product=DUF3037 domain-containing protein;protein_id=RUP96296.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 337777 338066 . - . ID=gene-D8M19_01595;Name=D8M19_01595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01595;pseudo=true RBLY01000001.1 Protein Homology CDS 337777 338066 . - 0 ID=cds-D8M19_01595;Parent=gene-D8M19_01595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291898.1;locus_tag=D8M19_01595;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank pseudogene 338126 338591 . + . ID=gene-D8M19_01600;Name=D8M19_01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01600;pseudo=true RBLY01000001.1 Protein Homology CDS 338126 338591 . + 0 ID=cds-D8M19_01600;Parent=gene-D8M19_01600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325328.1;locus_tag=D8M19_01600;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 338588 339604 . + . ID=gene-D8M19_01605;Name=D8M19_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01605 RBLY01000001.1 Protein Homology CDS 338588 339604 . + 0 ID=cds-RUP96297.1;Parent=gene-D8M19_01605;Dbxref=NCBI_GP:RUP96297.1;Name=RUP96297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005291893.1;locus_tag=D8M19_01605;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP96297.1;transl_table=11 RBLY01000001.1 Genbank gene 339970 340341 . + . ID=gene-D8M19_01610;Name=D8M19_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01610 RBLY01000001.1 Protein Homology CDS 339970 340341 . + 0 ID=cds-RUP96298.1;Parent=gene-D8M19_01610;Dbxref=NCBI_GP:RUP96298.1;Name=RUP96298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120096.1;locus_tag=D8M19_01610;product=hypothetical protein;protein_id=RUP96298.1;transl_table=11 RBLY01000001.1 Genbank gene 340579 340806 . - . ID=gene-D8M19_01615;Name=D8M19_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01615 RBLY01000001.1 Protein Homology CDS 340579 340806 . - 0 ID=cds-RUP96299.1;Parent=gene-D8M19_01615;Dbxref=NCBI_GP:RUP96299.1;Name=RUP96299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M19_01615;product=hypothetical protein;protein_id=RUP96299.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 341141 341850 . - . ID=gene-D8M19_01620;Name=D8M19_01620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01620;pseudo=true RBLY01000001.1 Protein Homology CDS 341141 341850 . - 0 ID=cds-D8M19_01620;Parent=gene-D8M19_01620;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558196.1;locus_tag=D8M19_01620;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank pseudogene 342137 342348 . + . ID=gene-D8M19_01625;Name=D8M19_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01625;pseudo=true RBLY01000001.1 Protein Homology CDS 342137 342348 . + 0 ID=cds-D8M19_01625;Parent=gene-D8M19_01625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014401288.1;locus_tag=D8M19_01625;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 RBLY01000001.1 Genbank pseudogene 342345 344299 . + . ID=gene-D8M19_01630;Name=D8M19_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01630;pseudo=true RBLY01000001.1 Protein Homology CDS 342345 344299 . + 0 ID=cds-D8M19_01630;Parent=gene-D8M19_01630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242317.1;locus_tag=D8M19_01630;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 344304 347270 . + . ID=gene-D8M19_01635;Name=D8M19_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01635 RBLY01000001.1 Protein Homology CDS 344304 347270 . + 0 ID=cds-RUP96300.1;Parent=gene-D8M19_01635;Dbxref=NCBI_GP:RUP96300.1;Name=RUP96300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853195.1;locus_tag=D8M19_01635;product=type III restriction-modification system endonuclease;protein_id=RUP96300.1;transl_table=11 RBLY01000001.1 Genbank gene 347298 347792 . + . ID=gene-D8M19_01640;Name=D8M19_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01640 RBLY01000001.1 Protein Homology CDS 347298 347792 . + 0 ID=cds-RUP96301.1;Parent=gene-D8M19_01640;Dbxref=NCBI_GP:RUP96301.1;Name=RUP96301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019174119.1;locus_tag=D8M19_01640;product=TIR domain-containing protein;protein_id=RUP96301.1;transl_table=11 RBLY01000001.1 Genbank gene 347789 348634 . + . ID=gene-D8M19_01645;Name=D8M19_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01645 RBLY01000001.1 Protein Homology CDS 347789 348634 . + 0 ID=cds-RUP96302.1;Parent=gene-D8M19_01645;Dbxref=NCBI_GP:RUP96302.1;Name=RUP96302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019174120.1;locus_tag=D8M19_01645;product=HIT family protein;protein_id=RUP96302.1;transl_table=11 RBLY01000001.1 Genbank gene 348809 350440 . - . ID=gene-D8M19_01650;Name=D8M19_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01650 RBLY01000001.1 Protein Homology CDS 348809 350440 . - 0 ID=cds-RUP96303.1;Parent=gene-D8M19_01650;Dbxref=NCBI_GP:RUP96303.1;Name=RUP96303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004008568.1;locus_tag=D8M19_01650;product=ABC transporter ATP-binding protein;protein_id=RUP96303.1;transl_table=11 RBLY01000001.1 Genbank gene 350647 350946 . - . ID=gene-D8M19_01655;Name=D8M19_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01655 RBLY01000001.1 Protein Homology CDS 350647 350946 . - 0 ID=cds-RUP96304.1;Parent=gene-D8M19_01655;Dbxref=NCBI_GP:RUP96304.1;Name=RUP96304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022453.1;locus_tag=D8M19_01655;product=hypothetical protein;protein_id=RUP96304.1;transl_table=11 RBLY01000001.1 Genbank pseudogene 351275 351497 . - . ID=gene-D8M19_01660;Name=D8M19_01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01660;pseudo=true RBLY01000001.1 Protein Homology CDS 351275 351497 . - 0 ID=cds-D8M19_01660;Parent=gene-D8M19_01660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277885.1;locus_tag=D8M19_01660;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000001.1 Genbank gene 351552 352454 . - . ID=gene-D8M19_01665;Name=D8M19_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01665 RBLY01000001.1 Protein Homology CDS 351552 352454 . - 0 ID=cds-RUP96305.1;Parent=gene-D8M19_01665;Dbxref=NCBI_GP:RUP96305.1;Name=RUP96305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277693.1;locus_tag=D8M19_01665;product=hypothetical protein;protein_id=RUP96305.1;transl_table=11 RBLY01000001.1 Genbank gene 352494 353438 . - . ID=gene-D8M19_01670;Name=D8M19_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01670 RBLY01000001.1 Protein Homology CDS 352494 353438 . - 0 ID=cds-RUP96306.1;Parent=gene-D8M19_01670;Dbxref=NCBI_GP:RUP96306.1;Name=RUP96306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297241.1;locus_tag=D8M19_01670;product=Mrr restriction system protein;protein_id=RUP96306.1;transl_table=11 RBLY01000001.1 Genbank gene 353572 353868 . + . ID=gene-D8M19_01675;Name=D8M19_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01675 RBLY01000001.1 Protein Homology CDS 353572 353868 . + 0 ID=cds-RUP96386.1;Parent=gene-D8M19_01675;Dbxref=NCBI_GP:RUP96386.1;Name=RUP96386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295398.1;locus_tag=D8M19_01675;product=hypothetical protein;protein_id=RUP96386.1;transl_table=11 RBLY01000001.1 Genbank gene 353969 356593 . + . ID=gene-D8M19_01680;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=D8M19_01680 RBLY01000001.1 Protein Homology CDS 353969 356593 . + 0 ID=cds-RUP96307.1;Parent=gene-D8M19_01680;Dbxref=NCBI_GP:RUP96307.1;Name=RUP96307.1;gbkey=CDS;gene=polA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120110.1;locus_tag=D8M19_01680;product=DNA polymerase I;protein_id=RUP96307.1;transl_table=11 RBLY01000001.1 Genbank gene 356681 358432 . - . ID=gene-D8M19_01685;Name=D8M19_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01685 RBLY01000001.1 Protein Homology CDS 356681 358432 . - 0 ID=cds-RUP96308.1;Parent=gene-D8M19_01685;Dbxref=NCBI_GP:RUP96308.1;Name=RUP96308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04954.11;locus_tag=D8M19_01685;product=hypothetical protein;protein_id=RUP96308.1;transl_table=11 RBLY01000001.1 Genbank gene 358538 360307 . - . ID=gene-D8M19_01690;Name=D8M19_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01690 RBLY01000001.1 Protein Homology CDS 358538 360307 . - 0 ID=cds-RUP96309.1;Parent=gene-D8M19_01690;Dbxref=NCBI_GP:RUP96309.1;Name=RUP96309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120112.1;locus_tag=D8M19_01690;product=ABC transporter ATP-binding protein;protein_id=RUP96309.1;transl_table=11 RBLY01000001.1 Genbank gene 360304 361260 . - . ID=gene-D8M19_01695;Name=D8M19_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01695 RBLY01000001.1 Protein Homology CDS 360304 361260 . - 0 ID=cds-RUP96310.1;Parent=gene-D8M19_01695;Dbxref=NCBI_GP:RUP96310.1;Name=RUP96310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120113.1;locus_tag=D8M19_01695;product=ABC transporter permease;protein_id=RUP96310.1;transl_table=11 RBLY01000001.1 Genbank gene 361250 362179 . - . ID=gene-D8M19_01700;Name=D8M19_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01700 RBLY01000001.1 Protein Homology CDS 361250 362179 . - 0 ID=cds-RUP96311.1;Parent=gene-D8M19_01700;Dbxref=NCBI_GP:RUP96311.1;Name=RUP96311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120114.1;locus_tag=D8M19_01700;product=ABC transporter permease;protein_id=RUP96311.1;transl_table=11 RBLY01000001.1 Genbank gene 362295 363887 . - . ID=gene-D8M19_01705;Name=D8M19_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01705 RBLY01000001.1 Protein Homology CDS 362295 363887 . - 0 ID=cds-RUP96312.1;Parent=gene-D8M19_01705;Dbxref=NCBI_GP:RUP96312.1;Name=RUP96312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120115.1;locus_tag=D8M19_01705;product=ABC transporter substrate-binding protein;protein_id=RUP96312.1;transl_table=11 RBLY01000001.1 Genbank gene 364447 365913 . + . ID=gene-D8M19_01710;Name=D8M19_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01710 RBLY01000001.1 Protein Homology CDS 364447 365913 . + 0 ID=cds-RUP96313.1;Parent=gene-D8M19_01710;Dbxref=NCBI_GP:RUP96313.1;Name=RUP96313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769418.1;locus_tag=D8M19_01710;product=30S ribosomal protein S1;protein_id=RUP96313.1;transl_table=11 RBLY01000001.1 Genbank gene 366030 366647 . + . ID=gene-D8M19_01715;Name=D8M19_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01715 RBLY01000001.1 Protein Homology CDS 366030 366647 . + 0 ID=cds-RUP96314.1;Parent=gene-D8M19_01715;Dbxref=NCBI_GP:RUP96314.1;Name=RUP96314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019898.1;locus_tag=D8M19_01715;product=dephospho-CoA kinase;protein_id=RUP96314.1;transl_table=11 RBLY01000001.1 Genbank gene 366666 368771 . + . ID=gene-D8M19_01720;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=D8M19_01720 RBLY01000001.1 Protein Homology CDS 366666 368771 . + 0 ID=cds-RUP96315.1;Parent=gene-D8M19_01720;Dbxref=NCBI_GP:RUP96315.1;Name=RUP96315.1;gbkey=CDS;gene=uvrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529319.1;locus_tag=D8M19_01720;product=excinuclease ABC subunit UvrB;protein_id=RUP96315.1;transl_table=11 RBLY01000001.1 Genbank gene 368890 369360 . + . ID=gene-D8M19_01725;Name=D8M19_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01725 RBLY01000001.1 Protein Homology CDS 368890 369360 . + 0 ID=cds-RUP96316.1;Parent=gene-D8M19_01725;Dbxref=NCBI_GP:RUP96316.1;Name=RUP96316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581448.1;locus_tag=D8M19_01725;product=universal stress protein;protein_id=RUP96316.1;transl_table=11 RBLY01000001.1 Genbank gene 369403 369870 . + . ID=gene-D8M19_01730;Name=D8M19_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01730 RBLY01000001.1 Protein Homology CDS 369403 369870 . + 0 ID=cds-RUP96317.1;Parent=gene-D8M19_01730;Dbxref=NCBI_GP:RUP96317.1;Name=RUP96317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600588.1;locus_tag=D8M19_01730;product=universal stress protein;protein_id=RUP96317.1;transl_table=11 RBLY01000001.1 Genbank gene 369957 372266 . - . ID=gene-D8M19_01735;Name=D8M19_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01735 RBLY01000001.1 Protein Homology CDS 369957 372266 . - 0 ID=cds-RUP96318.1;Parent=gene-D8M19_01735;Dbxref=NCBI_GP:RUP96318.1;Name=RUP96318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120123.1;locus_tag=D8M19_01735;product=helicase;protein_id=RUP96318.1;transl_table=11 RBLY01000001.1 Genbank gene 372281 373132 . - . ID=gene-D8M19_01740;Name=D8M19_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01740 RBLY01000001.1 Protein Homology CDS 372281 373132 . - 0 ID=cds-RUP96319.1;Parent=gene-D8M19_01740;Dbxref=NCBI_GP:RUP96319.1;Name=RUP96319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120124.1;locus_tag=D8M19_01740;product=DoxX family protein;protein_id=RUP96319.1;transl_table=11 RBLY01000001.1 Genbank gene 373225 373824 . - . ID=gene-D8M19_01745;Name=D8M19_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01745 RBLY01000001.1 Protein Homology CDS 373225 373824 . - 0 ID=cds-RUP96320.1;Parent=gene-D8M19_01745;Dbxref=NCBI_GP:RUP96320.1;Name=RUP96320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120125.1;locus_tag=D8M19_01745;product=MBL fold metallo-hydrolase;protein_id=RUP96320.1;transl_table=11 RBLY01000001.1 Genbank gene 373953 376796 . + . ID=gene-D8M19_01750;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=D8M19_01750 RBLY01000001.1 Protein Homology CDS 373953 376796 . + 0 ID=cds-RUP96321.1;Parent=gene-D8M19_01750;Dbxref=NCBI_GP:RUP96321.1;Name=RUP96321.1;gbkey=CDS;gene=uvrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120126.1;locus_tag=D8M19_01750;product=excinuclease ABC subunit UvrA;protein_id=RUP96321.1;transl_table=11 RBLY01000001.1 Genbank gene 377111 377632 . + . ID=gene-D8M19_01755;Name=D8M19_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01755 RBLY01000001.1 Protein Homology CDS 377111 377632 . + 0 ID=cds-RUP96322.1;Parent=gene-D8M19_01755;Dbxref=NCBI_GP:RUP96322.1;Name=RUP96322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840930.1;locus_tag=D8M19_01755;product=translation initiation factor IF-3;protein_id=RUP96322.1;transl_table=11 RBLY01000001.1 Genbank gene 377666 377860 . + . ID=gene-D8M19_01760;Name=D8M19_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01760 RBLY01000001.1 Protein Homology CDS 377666 377860 . + 0 ID=cds-RUP96323.1;Parent=gene-D8M19_01760;Dbxref=NCBI_GP:RUP96323.1;Name=RUP96323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851299.1;locus_tag=D8M19_01760;product=50S ribosomal protein L35;protein_id=RUP96323.1;transl_table=11 RBLY01000001.1 Genbank gene 377919 378302 . + . ID=gene-D8M19_01765;Name=D8M19_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01765 RBLY01000001.1 Protein Homology CDS 377919 378302 . + 0 ID=cds-RUP96324.1;Parent=gene-D8M19_01765;Dbxref=NCBI_GP:RUP96324.1;Name=RUP96324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600599.1;locus_tag=D8M19_01765;product=50S ribosomal protein L20;protein_id=RUP96324.1;transl_table=11 RBLY01000001.1 Genbank gene 378407 379228 . + . ID=gene-D8M19_01770;Name=D8M19_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01770 RBLY01000001.1 Protein Homology CDS 378407 379228 . + 0 ID=cds-RUP96325.1;Parent=gene-D8M19_01770;Dbxref=NCBI_GP:RUP96325.1;Name=RUP96325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120130.1;locus_tag=D8M19_01770;product=RNA methyltransferase;protein_id=RUP96325.1;transl_table=11 RBLY01000001.1 Genbank gene 379350 380408 . + . ID=gene-D8M19_01775;Name=D8M19_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01775 RBLY01000001.1 Protein Homology CDS 379350 380408 . + 0 ID=cds-RUP96326.1;Parent=gene-D8M19_01775;Dbxref=NCBI_GP:RUP96326.1;Name=RUP96326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120131.1;locus_tag=D8M19_01775;product=phenylalanine--tRNA ligase subunit alpha;protein_id=RUP96326.1;transl_table=11 RBLY01000001.1 Genbank gene 380438 382942 . + . ID=gene-D8M19_01780;Name=D8M19_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01780 RBLY01000001.1 Protein Homology CDS 380438 382942 . + 0 ID=cds-RUP96327.1;Parent=gene-D8M19_01780;Dbxref=NCBI_GP:RUP96327.1;Name=RUP96327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120132.1;locus_tag=D8M19_01780;product=phenylalanine--tRNA ligase subunit beta;protein_id=RUP96327.1;transl_table=11 RBLY01000001.1 Genbank gene 383199 384227 . - . ID=gene-D8M19_01785;Name=D8M19_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01785 RBLY01000001.1 Protein Homology CDS 383199 384227 . - 0 ID=cds-RUP96328.1;Parent=gene-D8M19_01785;Dbxref=NCBI_GP:RUP96328.1;Name=RUP96328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120133.1;locus_tag=D8M19_01785;product=ornithine cyclodeaminase;protein_id=RUP96328.1;transl_table=11 RBLY01000001.1 Genbank gene 384319 385713 . - . ID=gene-D8M19_01790;Name=D8M19_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01790 RBLY01000001.1 Protein Homology CDS 384319 385713 . - 0 ID=cds-RUP96329.1;Parent=gene-D8M19_01790;Dbxref=NCBI_GP:RUP96329.1;Name=RUP96329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120134.1;locus_tag=D8M19_01790;product=amino acid permease;protein_id=RUP96329.1;transl_table=11 RBLY01000001.1 Genbank gene 386176 387195 . - . ID=gene-D8M19_01795;Name=D8M19_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01795 RBLY01000001.1 Protein Homology CDS 386176 387195 . - 0 ID=cds-RUP96330.1;Parent=gene-D8M19_01795;Dbxref=NCBI_GP:RUP96330.1;Name=RUP96330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120136.1;locus_tag=D8M19_01795;product=formamidase;protein_id=RUP96330.1;transl_table=11 RBLY01000001.1 Genbank gene 387347 388390 . + . ID=gene-D8M19_01800;Name=D8M19_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01800 RBLY01000001.1 Protein Homology CDS 387347 388390 . + 0 ID=cds-RUP96331.1;Parent=gene-D8M19_01800;Dbxref=NCBI_GP:RUP96331.1;Name=RUP96331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120137.1;locus_tag=D8M19_01800;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=RUP96331.1;transl_table=11 RBLY01000001.1 Genbank gene 388594 389742 . + . ID=gene-D8M19_01805;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=D8M19_01805 RBLY01000001.1 Protein Homology CDS 388594 389742 . + 0 ID=cds-RUP96387.1;Parent=gene-D8M19_01805;Dbxref=NCBI_GP:RUP96387.1;Name=RUP96387.1;gbkey=CDS;gene=argJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019882.1;locus_tag=D8M19_01805;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=RUP96387.1;transl_table=11 RBLY01000001.1 Genbank gene 389786 390721 . + . ID=gene-D8M19_01810;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=D8M19_01810 RBLY01000001.1 Protein Homology CDS 389786 390721 . + 0 ID=cds-RUP96388.1;Parent=gene-D8M19_01810;Dbxref=NCBI_GP:RUP96388.1;Name=RUP96388.1;gbkey=CDS;gene=argB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282711.1;locus_tag=D8M19_01810;product=acetylglutamate kinase;protein_id=RUP96388.1;transl_table=11 RBLY01000001.1 Genbank gene 390718 391890 . + . ID=gene-D8M19_01815;Name=D8M19_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01815 RBLY01000001.1 Protein Homology CDS 390718 391890 . + 0 ID=cds-RUP96332.1;Parent=gene-D8M19_01815;Dbxref=NCBI_GP:RUP96332.1;Name=RUP96332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120140.1;locus_tag=D8M19_01815;product=acetylornithine transaminase;protein_id=RUP96332.1;transl_table=11 RBLY01000001.1 Genbank gene 391899 392894 . + . ID=gene-D8M19_01820;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=D8M19_01820 RBLY01000001.1 Protein Homology CDS 391899 392894 . + 0 ID=cds-RUP96333.1;Parent=gene-D8M19_01820;Dbxref=NCBI_GP:RUP96333.1;Name=RUP96333.1;gbkey=CDS;gene=argF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120141.1;locus_tag=D8M19_01820;product=ornithine carbamoyltransferase;protein_id=RUP96333.1;transl_table=11 RBLY01000001.1 Genbank gene 392891 393388 . + . ID=gene-D8M19_01825;Name=D8M19_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01825 RBLY01000001.1 Protein Homology CDS 392891 393388 . + 0 ID=cds-RUP96334.1;Parent=gene-D8M19_01825;Dbxref=NCBI_GP:RUP96334.1;Name=RUP96334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120142.1;locus_tag=D8M19_01825;product=arginine repressor;protein_id=RUP96334.1;transl_table=11 RBLY01000001.1 Genbank gene 393550 394752 . + . ID=gene-D8M19_01830;Name=D8M19_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01830 RBLY01000001.1 Protein Homology CDS 393550 394752 . + 0 ID=cds-RUP96335.1;Parent=gene-D8M19_01830;Dbxref=NCBI_GP:RUP96335.1;Name=RUP96335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120143.1;locus_tag=D8M19_01830;product=argininosuccinate synthase;protein_id=RUP96335.1;transl_table=11 RBLY01000001.1 Genbank gene 394752 396206 . + . ID=gene-D8M19_01835;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=D8M19_01835 RBLY01000001.1 Protein Homology CDS 394752 396206 . + 0 ID=cds-RUP96336.1;Parent=gene-D8M19_01835;Dbxref=NCBI_GP:RUP96336.1;Name=RUP96336.1;gbkey=CDS;gene=argH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120144.1;locus_tag=D8M19_01835;product=argininosuccinate lyase;protein_id=RUP96336.1;transl_table=11 RBLY01000001.1 Genbank gene 396216 396407 . + . ID=gene-D8M19_01840;Name=D8M19_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01840 RBLY01000001.1 Protein Homology CDS 396216 396407 . + 0 ID=cds-RUP96337.1;Parent=gene-D8M19_01840;Dbxref=NCBI_GP:RUP96337.1;Name=RUP96337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120145.1;locus_tag=D8M19_01840;product=Trm112 family protein;protein_id=RUP96337.1;transl_table=11 RBLY01000001.1 Genbank gene 396410 397675 . + . ID=gene-D8M19_01845;Name=D8M19_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01845 RBLY01000001.1 Protein Homology CDS 396410 397675 . + 0 ID=cds-RUP96338.1;Parent=gene-D8M19_01845;Dbxref=NCBI_GP:RUP96338.1;Name=RUP96338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120146.1;locus_tag=D8M19_01845;product=tyrosine--tRNA ligase;protein_id=RUP96338.1;transl_table=11 ##sequence-region RBLY01000020.1 1 936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000020.1 Genbank region 1 936 . + . ID=RBLY01000020.1:1..936;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000020.1 Genbank gene 1 685 . - . ID=gene-D8M19_10610;Name=D8M19_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10610;partial=true;start_range=.,1 RBLY01000020.1 Protein Homology CDS 1 685 . - 0 ID=cds-RUP91459.1;Parent=gene-D8M19_10610;Dbxref=NCBI_GP:RUP91459.1;Name=RUP91459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_236943.1;locus_tag=D8M19_10610;partial=true;product=ABC transporter permease;protein_id=RUP91459.1;start_range=.,1;transl_table=11 RBLY01000020.1 Genbank gene 745 936 . - . ID=gene-D8M19_10615;Name=D8M19_10615;end_range=936,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10615;partial=true RBLY01000020.1 Protein Homology CDS 745 936 . - 0 ID=cds-RUP91460.1;Parent=gene-D8M19_10615;Dbxref=NCBI_GP:RUP91460.1;Name=RUP91460.1;end_range=936,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_793897.1;locus_tag=D8M19_10615;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP91460.1;transl_table=11 ##sequence-region RBLY01000021.1 1 922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000021.1 Genbank region 1 922 . + . ID=RBLY01000021.1:1..922;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000021.1 Genbank gene 1 402 . - . ID=gene-D8M19_10620;Name=D8M19_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10620;partial=true;start_range=.,1 RBLY01000021.1 Protein Homology CDS 1 402 . - 0 ID=cds-RUP91455.1;Parent=gene-D8M19_10620;Dbxref=NCBI_GP:RUP91455.1;Name=RUP91455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856568.1;locus_tag=D8M19_10620;partial=true;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP91455.1;start_range=.,1;transl_table=11 RBLY01000021.1 Genbank gene 464 922 . - . ID=gene-D8M19_10625;Name=D8M19_10625;end_range=922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10625;partial=true RBLY01000021.1 Protein Homology CDS 464 922 . - 0 ID=cds-RUP91456.1;Parent=gene-D8M19_10625;Dbxref=NCBI_GP:RUP91456.1;Name=RUP91456.1;end_range=922,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017487999.1;locus_tag=D8M19_10625;partial=true;product=mannose-1-phosphate guanylyltransferase;protein_id=RUP91456.1;transl_table=11 ##sequence-region RBLY01000022.1 1 894 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000022.1 Genbank region 1 894 . + . ID=RBLY01000022.1:1..894;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000022.1 Genbank gene 1 894 . + . ID=gene-D8M19_10630;Name=D8M19_10630;end_range=894,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10630;partial=true;start_range=.,1 RBLY01000022.1 Protein Homology CDS 1 894 . + 1 ID=cds-RUP91452.1;Parent=gene-D8M19_10630;Dbxref=NCBI_GP:RUP91452.1;Name=RUP91452.1;end_range=894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005786367.1;locus_tag=D8M19_10630;partial=true;product=type IV secretion protein Rhs;protein_id=RUP91452.1;start_range=.,1;transl_table=11 ##sequence-region RBLY01000023.1 1 865 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000023.1 Genbank region 1 865 . + . ID=RBLY01000023.1:1..865;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000023.1 Genbank pseudogene 1 759 . - . ID=gene-D8M19_10635;Name=D8M19_10635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_10635;pseudo=true RBLY01000023.1 Protein Homology CDS 1 759 . - 0 ID=cds-D8M19_10635;Parent=gene-D8M19_10635;Note=frameshifted%3B incomplete%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966283.1;locus_tag=D8M19_10635;product=starch synthase;pseudo=true;transl_table=11 ##sequence-region RBLY01000024.1 1 788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000024.1 Genbank region 1 788 . + . ID=RBLY01000024.1:1..788;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000024.1 Genbank gene 71 788 . + . ID=gene-D8M19_10640;Name=D8M19_10640;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10640;partial=true RBLY01000024.1 Protein Homology CDS 71 788 . + 0 ID=cds-RUP91449.1;Parent=gene-D8M19_10640;Dbxref=NCBI_GP:RUP91449.1;Name=RUP91449.1;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016973953.1;locus_tag=D8M19_10640;partial=true;product=ABC transporter substrate-binding protein;protein_id=RUP91449.1;transl_table=11 ##sequence-region RBLY01000025.1 1 778 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000025.1 Genbank region 1 778 . + . ID=RBLY01000025.1:1..778;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000025.1 Genbank gene 1 778 . - . ID=gene-D8M19_10645;Name=D8M19_10645;end_range=778,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10645;partial=true;start_range=.,1 RBLY01000025.1 Protein Homology CDS 1 778 . - 0 ID=cds-RUP91446.1;Parent=gene-D8M19_10645;Dbxref=NCBI_GP:RUP91446.1;Name=RUP91446.1;end_range=778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854270.1;locus_tag=D8M19_10645;partial=true;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=RUP91446.1;start_range=.,1;transl_table=11 ##sequence-region RBLY01000026.1 1 775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000026.1 Genbank region 1 775 . + . ID=RBLY01000026.1:1..775;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000026.1 Genbank gene 1 300 . - . ID=gene-D8M19_10650;Name=D8M19_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10650;partial=true;start_range=.,1 RBLY01000026.1 GeneMarkS+ CDS 1 300 . - 0 ID=cds-RUP91096.1;Parent=gene-D8M19_10650;Dbxref=NCBI_GP:RUP91096.1;Name=RUP91096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_10650;partial=true;product=hypothetical protein;protein_id=RUP91096.1;start_range=.,1;transl_table=11 RBLY01000026.1 Genbank gene 379 775 . - . ID=gene-D8M19_10655;Name=D8M19_10655;end_range=775,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10655;partial=true RBLY01000026.1 Protein Homology CDS 379 775 . - 1 ID=cds-RUP91097.1;Parent=gene-D8M19_10655;Dbxref=NCBI_GP:RUP91097.1;Name=RUP91097.1;end_range=775,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854138.1;locus_tag=D8M19_10655;partial=true;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=RUP91097.1;transl_table=11 ##sequence-region RBLY01000027.1 1 769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000027.1 Genbank region 1 769 . + . ID=RBLY01000027.1:1..769;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000027.1 Genbank gene 1 769 . - . ID=gene-D8M19_10660;Name=D8M19_10660;end_range=769,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10660;partial=true;start_range=.,1 RBLY01000027.1 Protein Homology CDS 1 769 . - 0 ID=cds-RUP91093.1;Parent=gene-D8M19_10660;Dbxref=NCBI_GP:RUP91093.1;Name=RUP91093.1;end_range=769,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010210811.1;locus_tag=D8M19_10660;partial=true;product=sugar kinase;protein_id=RUP91093.1;start_range=.,1;transl_table=11 ##sequence-region RBLY01000028.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000028.1 Genbank region 1 734 . + . ID=RBLY01000028.1:1..734;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000028.1 Genbank gene 1 734 . - . ID=gene-D8M19_10665;Name=D8M19_10665;end_range=734,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10665;partial=true;start_range=.,1 RBLY01000028.1 Protein Homology CDS 1 734 . - 0 ID=cds-RUP91090.1;Parent=gene-D8M19_10665;Dbxref=NCBI_GP:RUP91090.1;Name=RUP91090.1;end_range=734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003196443.1;locus_tag=D8M19_10665;partial=true;product=propionyl-CoA--succinate CoA transferase;protein_id=RUP91090.1;start_range=.,1;transl_table=11 ##sequence-region RBLY01000029.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000029.1 Genbank region 1 726 . + . ID=RBLY01000029.1:1..726;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000029.1 Genbank gene 1 726 . + . ID=gene-D8M19_10670;Name=D8M19_10670;end_range=726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_10670;partial=true;start_range=.,1 RBLY01000029.1 Protein Homology CDS 1 726 . + 0 ID=cds-RUP91088.1;Parent=gene-D8M19_10670;Dbxref=NCBI_GP:RUP91088.1;Name=RUP91088.1;end_range=726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018763960.1;locus_tag=D8M19_10670;partial=true;product=serine hydroxymethyltransferase;protein_id=RUP91088.1;start_range=.,1;transl_table=11 ##sequence-region RBLY01000002.1 1 342769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000002.1 Genbank region 1 342769 . + . ID=RBLY01000002.1:1..342769;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000002.1 Genbank pseudogene 128 499 . + . ID=gene-D8M19_01850;Name=D8M19_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_01850;pseudo=true RBLY01000002.1 Protein Homology CDS 128 499 . + 0 ID=cds-D8M19_01850;Parent=gene-D8M19_01850;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531516.1;locus_tag=D8M19_01850;product=exodeoxyribonuclease V subunit beta;pseudo=true;transl_table=11 RBLY01000002.1 Genbank gene 589 2253 . - . ID=gene-D8M19_01855;Name=D8M19_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01855 RBLY01000002.1 Protein Homology CDS 589 2253 . - 0 ID=cds-RUP95311.1;Parent=gene-D8M19_01855;Dbxref=NCBI_GP:RUP95311.1;Name=RUP95311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186644.1;locus_tag=D8M19_01855;product=formate--tetrahydrofolate ligase;protein_id=RUP95311.1;transl_table=11 RBLY01000002.1 Genbank gene 2369 3889 . - . ID=gene-D8M19_01860;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=D8M19_01860 RBLY01000002.1 Protein Homology CDS 2369 3889 . - 0 ID=cds-RUP95046.1;Parent=gene-D8M19_01860;Dbxref=NCBI_GP:RUP95046.1;Name=RUP95046.1;gbkey=CDS;gene=aspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186653.1;locus_tag=D8M19_01860;product=aspartate ammonia-lyase;protein_id=RUP95046.1;transl_table=11 RBLY01000002.1 Genbank gene 3965 4810 . - . ID=gene-D8M19_01865;Name=D8M19_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01865 RBLY01000002.1 Protein Homology CDS 3965 4810 . - 0 ID=cds-RUP95047.1;Parent=gene-D8M19_01865;Dbxref=NCBI_GP:RUP95047.1;Name=RUP95047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119541.1;locus_tag=D8M19_01865;product=ATP phosphoribosyltransferase;protein_id=RUP95047.1;transl_table=11 RBLY01000002.1 Genbank gene 4835 5098 . - . ID=gene-D8M19_01870;Name=D8M19_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01870 RBLY01000002.1 Protein Homology CDS 4835 5098 . - 0 ID=cds-RUP95312.1;Parent=gene-D8M19_01870;Dbxref=NCBI_GP:RUP95312.1;Name=RUP95312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581962.1;locus_tag=D8M19_01870;product=phosphoribosyl-ATP diphosphatase;protein_id=RUP95312.1;transl_table=11 RBLY01000002.1 Genbank gene 5126 6379 . - . ID=gene-D8M19_01875;Name=mshC;gbkey=Gene;gene=mshC;gene_biotype=protein_coding;locus_tag=D8M19_01875 RBLY01000002.1 Protein Homology CDS 5126 6379 . - 0 ID=cds-RUP95048.1;Parent=gene-D8M19_01875;Dbxref=NCBI_GP:RUP95048.1;Name=RUP95048.1;gbkey=CDS;gene=mshC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119543.1;locus_tag=D8M19_01875;product=cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase;protein_id=RUP95048.1;transl_table=11 RBLY01000002.1 Genbank gene 6401 7228 . - . ID=gene-D8M19_01880;Name=D8M19_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01880 RBLY01000002.1 Protein Homology CDS 6401 7228 . - 0 ID=cds-RUP95313.1;Parent=gene-D8M19_01880;Dbxref=NCBI_GP:RUP95313.1;Name=RUP95313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823701.1;locus_tag=D8M19_01880;product=undecaprenyl-diphosphate phosphatase;protein_id=RUP95313.1;transl_table=11 RBLY01000002.1 Genbank gene 7516 8484 . + . ID=gene-D8M19_01885;Name=D8M19_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01885 RBLY01000002.1 GeneMarkS+ CDS 7516 8484 . + 0 ID=cds-RUP95049.1;Parent=gene-D8M19_01885;Dbxref=NCBI_GP:RUP95049.1;Name=RUP95049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01885;product=hypothetical protein;protein_id=RUP95049.1;transl_table=11 RBLY01000002.1 Genbank gene 8487 9662 . + . ID=gene-D8M19_01890;Name=D8M19_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01890 RBLY01000002.1 Protein Homology CDS 8487 9662 . + 0 ID=cds-RUP95050.1;Parent=gene-D8M19_01890;Dbxref=NCBI_GP:RUP95050.1;Name=RUP95050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119546.1;locus_tag=D8M19_01890;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=RUP95050.1;transl_table=11 RBLY01000002.1 Genbank gene 9659 10075 . - . ID=gene-D8M19_01895;Name=D8M19_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01895 RBLY01000002.1 Protein Homology CDS 9659 10075 . - 0 ID=cds-RUP95051.1;Parent=gene-D8M19_01895;Dbxref=NCBI_GP:RUP95051.1;Name=RUP95051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119547.1;locus_tag=D8M19_01895;product=hypothetical protein;protein_id=RUP95051.1;transl_table=11 RBLY01000002.1 Genbank gene 10099 10638 . - . ID=gene-D8M19_01900;Name=D8M19_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01900 RBLY01000002.1 Protein Homology CDS 10099 10638 . - 0 ID=cds-RUP95052.1;Parent=gene-D8M19_01900;Dbxref=NCBI_GP:RUP95052.1;Name=RUP95052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324806.1;locus_tag=D8M19_01900;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=RUP95052.1;transl_table=11 RBLY01000002.1 Genbank gene 10909 10994 . + . ID=gene-D8M19_01905;Name=D8M19_01905;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_01905 RBLY01000002.1 tRNAscan-SE tRNA 10909 10994 . + . ID=rna-D8M19_01905;Parent=gene-D8M19_01905;anticodon=(pos:10942..10944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01905;product=tRNA-Leu RBLY01000002.1 tRNAscan-SE exon 10909 10994 . + . ID=exon-D8M19_01905-1;Parent=rna-D8M19_01905;anticodon=(pos:10942..10944);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_01905;product=tRNA-Leu RBLY01000002.1 Genbank gene 11097 11864 . - . ID=gene-D8M19_01910;Name=D8M19_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01910 RBLY01000002.1 Protein Homology CDS 11097 11864 . - 0 ID=cds-RUP95314.1;Parent=gene-D8M19_01910;Dbxref=NCBI_GP:RUP95314.1;Name=RUP95314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323992.1;locus_tag=D8M19_01910;product=ABC transporter ATP-binding protein;protein_id=RUP95314.1;transl_table=11 RBLY01000002.1 Genbank gene 11900 12955 . - . ID=gene-D8M19_01915;Name=D8M19_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01915 RBLY01000002.1 Protein Homology CDS 11900 12955 . - 0 ID=cds-RUP95315.1;Parent=gene-D8M19_01915;Dbxref=NCBI_GP:RUP95315.1;Name=RUP95315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191203.1;locus_tag=D8M19_01915;product=iron ABC transporter permease;protein_id=RUP95315.1;transl_table=11 RBLY01000002.1 Genbank gene 13045 14244 . - . ID=gene-D8M19_01920;Name=D8M19_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01920 RBLY01000002.1 Protein Homology CDS 13045 14244 . - 0 ID=cds-RUP95053.1;Parent=gene-D8M19_01920;Dbxref=NCBI_GP:RUP95053.1;Name=RUP95053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119551.1;locus_tag=D8M19_01920;product=ferrisiderophore receptor Irp6A;protein_id=RUP95053.1;transl_table=11 RBLY01000002.1 Genbank gene 14603 15310 . + . ID=gene-D8M19_01925;Name=D8M19_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01925 RBLY01000002.1 Protein Homology CDS 14603 15310 . + 0 ID=cds-RUP95316.1;Parent=gene-D8M19_01925;Dbxref=NCBI_GP:RUP95316.1;Name=RUP95316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119552.1;locus_tag=D8M19_01925;product=TVP38/TMEM64 family protein;protein_id=RUP95316.1;transl_table=11 RBLY01000002.1 Genbank gene 15413 15985 . + . ID=gene-D8M19_01930;Name=D8M19_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01930 RBLY01000002.1 Protein Homology CDS 15413 15985 . + 0 ID=cds-RUP95054.1;Parent=gene-D8M19_01930;Dbxref=NCBI_GP:RUP95054.1;Name=RUP95054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119553.1;locus_tag=D8M19_01930;product=MarR family transcriptional regulator;protein_id=RUP95054.1;transl_table=11 RBLY01000002.1 Genbank gene 15951 16799 . - . ID=gene-D8M19_01935;Name=D8M19_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01935 RBLY01000002.1 Protein Homology CDS 15951 16799 . - 0 ID=cds-RUP95055.1;Parent=gene-D8M19_01935;Dbxref=NCBI_GP:RUP95055.1;Name=RUP95055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324809.1;locus_tag=D8M19_01935;product=DUF3097 domain-containing protein;protein_id=RUP95055.1;transl_table=11 RBLY01000002.1 Genbank gene 16833 17603 . + . ID=gene-D8M19_01940;Name=D8M19_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01940 RBLY01000002.1 Protein Homology CDS 16833 17603 . + 0 ID=cds-RUP95056.1;Parent=gene-D8M19_01940;Dbxref=NCBI_GP:RUP95056.1;Name=RUP95056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186688.1;locus_tag=D8M19_01940;product=hypothetical protein;protein_id=RUP95056.1;transl_table=11 RBLY01000002.1 Genbank gene 17666 18739 . - . ID=gene-D8M19_01945;Name=D8M19_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01945 RBLY01000002.1 Protein Homology CDS 17666 18739 . - 0 ID=cds-RUP95057.1;Parent=gene-D8M19_01945;Dbxref=NCBI_GP:RUP95057.1;Name=RUP95057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119556.1;locus_tag=D8M19_01945;product=ferrochelatase;protein_id=RUP95057.1;transl_table=11 RBLY01000002.1 Genbank gene 18787 20661 . - . ID=gene-D8M19_01950;Name=D8M19_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01950 RBLY01000002.1 Protein Homology CDS 18787 20661 . - 0 ID=cds-RUP95058.1;Parent=gene-D8M19_01950;Dbxref=NCBI_GP:RUP95058.1;Name=RUP95058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00877.17;locus_tag=D8M19_01950;product=hydrolase;protein_id=RUP95058.1;transl_table=11 RBLY01000002.1 Genbank gene 21054 21584 . - . ID=gene-D8M19_01955;Name=D8M19_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01955 RBLY01000002.1 GeneMarkS+ CDS 21054 21584 . - 0 ID=cds-RUP95059.1;Parent=gene-D8M19_01955;Dbxref=NCBI_GP:RUP95059.1;Name=RUP95059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01955;product=hypothetical protein;protein_id=RUP95059.1;transl_table=11 RBLY01000002.1 Genbank gene 21819 24650 . + . ID=gene-D8M19_01960;Name=D8M19_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01960 RBLY01000002.1 Protein Homology CDS 21819 24650 . + 0 ID=cds-RUP95060.1;Parent=gene-D8M19_01960;Dbxref=NCBI_GP:RUP95060.1;Name=RUP95060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845844.1;locus_tag=D8M19_01960;product=aconitate hydratase;protein_id=RUP95060.1;transl_table=11 RBLY01000002.1 Genbank gene 24798 25367 . + . ID=gene-D8M19_01965;Name=D8M19_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01965 RBLY01000002.1 Protein Homology CDS 24798 25367 . + 0 ID=cds-RUP95061.1;Parent=gene-D8M19_01965;Dbxref=NCBI_GP:RUP95061.1;Name=RUP95061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119560.1;locus_tag=D8M19_01965;product=TetR/AcrR family transcriptional regulator;protein_id=RUP95061.1;transl_table=11 RBLY01000002.1 Genbank gene 25393 26142 . + . ID=gene-D8M19_01970;Name=D8M19_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01970 RBLY01000002.1 Protein Homology CDS 25393 26142 . + 0 ID=cds-RUP95062.1;Parent=gene-D8M19_01970;Dbxref=NCBI_GP:RUP95062.1;Name=RUP95062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119561.1;locus_tag=D8M19_01970;product=glutamine amidotransferase;protein_id=RUP95062.1;transl_table=11 RBLY01000002.1 Genbank gene 26139 26843 . - . ID=gene-D8M19_01975;Name=D8M19_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01975 RBLY01000002.1 Protein Homology CDS 26139 26843 . - 0 ID=cds-RUP95063.1;Parent=gene-D8M19_01975;Dbxref=NCBI_GP:RUP95063.1;Name=RUP95063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119562.1;locus_tag=D8M19_01975;product=NAD(P)-dependent oxidoreductase;protein_id=RUP95063.1;transl_table=11 RBLY01000002.1 Genbank gene 26922 27191 . + . ID=gene-D8M19_01980;Name=D8M19_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01980 RBLY01000002.1 Protein Homology CDS 26922 27191 . + 0 ID=cds-RUP95064.1;Parent=gene-D8M19_01980;Dbxref=NCBI_GP:RUP95064.1;Name=RUP95064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186707.1;locus_tag=D8M19_01980;product=ACT domain-containing protein;protein_id=RUP95064.1;transl_table=11 RBLY01000002.1 Genbank gene 27219 28583 . + . ID=gene-D8M19_01985;Name=D8M19_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01985 RBLY01000002.1 Protein Homology CDS 27219 28583 . + 0 ID=cds-RUP95065.1;Parent=gene-D8M19_01985;Dbxref=NCBI_GP:RUP95065.1;Name=RUP95065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119564.1;locus_tag=D8M19_01985;product=PFL family protein;protein_id=RUP95065.1;transl_table=11 RBLY01000002.1 Genbank gene 28643 29377 . - . ID=gene-D8M19_01990;Name=D8M19_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01990 RBLY01000002.1 GeneMarkS+ CDS 28643 29377 . - 0 ID=cds-RUP95066.1;Parent=gene-D8M19_01990;Dbxref=NCBI_GP:RUP95066.1;Name=RUP95066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_01990;product=hypothetical protein;protein_id=RUP95066.1;transl_table=11 RBLY01000002.1 Genbank gene 29481 31112 . - . ID=gene-D8M19_01995;Name=D8M19_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_01995 RBLY01000002.1 Protein Homology CDS 29481 31112 . - 0 ID=cds-RUP95317.1;Parent=gene-D8M19_01995;Dbxref=NCBI_GP:RUP95317.1;Name=RUP95317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017030.1;locus_tag=D8M19_01995;product=ABC transporter ATP-binding protein;protein_id=RUP95317.1;transl_table=11 RBLY01000002.1 Genbank gene 31244 31320 . + . ID=gene-D8M19_02000;Name=D8M19_02000;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02000 RBLY01000002.1 tRNAscan-SE tRNA 31244 31320 . + . ID=rna-D8M19_02000;Parent=gene-D8M19_02000;anticodon=(pos:31278..31280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02000;product=tRNA-Pro RBLY01000002.1 tRNAscan-SE exon 31244 31320 . + . ID=exon-D8M19_02000-1;Parent=rna-D8M19_02000;anticodon=(pos:31278..31280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02000;product=tRNA-Pro RBLY01000002.1 Genbank gene 31620 32528 . + . ID=gene-D8M19_02005;Name=D8M19_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02005 RBLY01000002.1 Protein Homology CDS 31620 32528 . + 0 ID=cds-RUP95067.1;Parent=gene-D8M19_02005;Dbxref=NCBI_GP:RUP95067.1;Name=RUP95067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119574.1;locus_tag=D8M19_02005;product=ABC transporter ATP-binding protein;protein_id=RUP95067.1;transl_table=11 RBLY01000002.1 Genbank gene 32533 33294 . + . ID=gene-D8M19_02010;Name=D8M19_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02010 RBLY01000002.1 Protein Homology CDS 32533 33294 . + 0 ID=cds-RUP95068.1;Parent=gene-D8M19_02010;Dbxref=NCBI_GP:RUP95068.1;Name=RUP95068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005294577.1;locus_tag=D8M19_02010;product=ABC transporter permease;protein_id=RUP95068.1;transl_table=11 RBLY01000002.1 Genbank gene 33295 34422 . + . ID=gene-D8M19_02015;Name=D8M19_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02015 RBLY01000002.1 Protein Homology CDS 33295 34422 . + 0 ID=cds-RUP95069.1;Parent=gene-D8M19_02015;Dbxref=NCBI_GP:RUP95069.1;Name=RUP95069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119576.1;locus_tag=D8M19_02015;product=sensor histidine kinase;protein_id=RUP95069.1;transl_table=11 RBLY01000002.1 Genbank gene 34419 35027 . + . ID=gene-D8M19_02020;Name=D8M19_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02020 RBLY01000002.1 Protein Homology CDS 34419 35027 . + 0 ID=cds-RUP95070.1;Parent=gene-D8M19_02020;Dbxref=NCBI_GP:RUP95070.1;Name=RUP95070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186507.1;locus_tag=D8M19_02020;product=DNA-binding response regulator;protein_id=RUP95070.1;transl_table=11 RBLY01000002.1 Genbank gene 35148 35582 . - . ID=gene-D8M19_02025;Name=D8M19_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02025 RBLY01000002.1 Protein Homology CDS 35148 35582 . - 0 ID=cds-RUP95071.1;Parent=gene-D8M19_02025;Dbxref=NCBI_GP:RUP95071.1;Name=RUP95071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186729.1;locus_tag=D8M19_02025;product=metal-sulfur cluster assembly factor;protein_id=RUP95071.1;transl_table=11 RBLY01000002.1 Genbank gene 35582 36034 . - . ID=gene-D8M19_02030;Name=D8M19_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02030 RBLY01000002.1 Protein Homology CDS 35582 36034 . - 0 ID=cds-RUP95072.1;Parent=gene-D8M19_02030;Dbxref=NCBI_GP:RUP95072.1;Name=RUP95072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279143.1;locus_tag=D8M19_02030;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=RUP95072.1;transl_table=11 RBLY01000002.1 Genbank gene 36040 37281 . - . ID=gene-D8M19_02035;Name=D8M19_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02035 RBLY01000002.1 Protein Homology CDS 36040 37281 . - 0 ID=cds-RUP95073.1;Parent=gene-D8M19_02035;Dbxref=NCBI_GP:RUP95073.1;Name=RUP95073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186733.1;locus_tag=D8M19_02035;product=cysteine desulfurase;protein_id=RUP95073.1;transl_table=11 RBLY01000002.1 Genbank gene 37355 38110 . - . ID=gene-D8M19_02040;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=D8M19_02040 RBLY01000002.1 Protein Homology CDS 37355 38110 . - 0 ID=cds-RUP95074.1;Parent=gene-D8M19_02040;Dbxref=NCBI_GP:RUP95074.1;Name=RUP95074.1;gbkey=CDS;gene=sufC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767685.1;locus_tag=D8M19_02040;product=Fe-S cluster assembly ATPase SufC;protein_id=RUP95074.1;transl_table=11 RBLY01000002.1 Genbank gene 38188 39354 . - . ID=gene-D8M19_02045;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=D8M19_02045 RBLY01000002.1 Protein Homology CDS 38188 39354 . - 0 ID=cds-RUP95075.1;Parent=gene-D8M19_02045;Dbxref=NCBI_GP:RUP95075.1;Name=RUP95075.1;gbkey=CDS;gene=sufD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186736.1;locus_tag=D8M19_02045;product=Fe-S cluster assembly protein SufD;protein_id=RUP95075.1;transl_table=11 RBLY01000002.1 Genbank gene 39356 40798 . - . ID=gene-D8M19_02050;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=D8M19_02050 RBLY01000002.1 Protein Homology CDS 39356 40798 . - 0 ID=cds-RUP95076.1;Parent=gene-D8M19_02050;Dbxref=NCBI_GP:RUP95076.1;Name=RUP95076.1;gbkey=CDS;gene=sufB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845883.1;locus_tag=D8M19_02050;product=Fe-S cluster assembly protein SufB;protein_id=RUP95076.1;transl_table=11 RBLY01000002.1 Genbank gene 40779 41552 . - . ID=gene-D8M19_02055;Name=D8M19_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02055 RBLY01000002.1 Protein Homology CDS 40779 41552 . - 0 ID=cds-RUP95318.1;Parent=gene-D8M19_02055;Dbxref=NCBI_GP:RUP95318.1;Name=RUP95318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823730.1;locus_tag=D8M19_02055;product=transcriptional regulator;protein_id=RUP95318.1;transl_table=11 RBLY01000002.1 Genbank gene 41793 43454 . + . ID=gene-D8M19_02060;Name=D8M19_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02060 RBLY01000002.1 Protein Homology CDS 41793 43454 . + 0 ID=cds-RUP95077.1;Parent=gene-D8M19_02060;Dbxref=NCBI_GP:RUP95077.1;Name=RUP95077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119585.1;locus_tag=D8M19_02060;product=alpha 1%2C6 mannopyranosyltransferase;protein_id=RUP95077.1;transl_table=11 RBLY01000002.1 Genbank gene 43451 44413 . + . ID=gene-D8M19_02065;Name=D8M19_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02065 RBLY01000002.1 Protein Homology CDS 43451 44413 . + 0 ID=cds-RUP95078.1;Parent=gene-D8M19_02065;Dbxref=NCBI_GP:RUP95078.1;Name=RUP95078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119586.1;locus_tag=D8M19_02065;product=ABC transporter ATP-binding protein;protein_id=RUP95078.1;transl_table=11 RBLY01000002.1 Genbank gene 44400 45167 . + . ID=gene-D8M19_02070;Name=D8M19_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02070 RBLY01000002.1 Protein Homology CDS 44400 45167 . + 0 ID=cds-RUP95079.1;Parent=gene-D8M19_02070;Dbxref=NCBI_GP:RUP95079.1;Name=RUP95079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279129.1;locus_tag=D8M19_02070;product=multidrug ABC transporter permease;protein_id=RUP95079.1;transl_table=11 RBLY01000002.1 Genbank gene 45350 46357 . + . ID=gene-D8M19_02075;Name=D8M19_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02075 RBLY01000002.1 Protein Homology CDS 45350 46357 . + 0 ID=cds-RUP95319.1;Parent=gene-D8M19_02075;Dbxref=NCBI_GP:RUP95319.1;Name=RUP95319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017019.1;locus_tag=D8M19_02075;product=heme A synthase;protein_id=RUP95319.1;transl_table=11 RBLY01000002.1 Genbank gene 46426 47397 . + . ID=gene-D8M19_02080;Name=D8M19_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02080 RBLY01000002.1 Protein Homology CDS 46426 47397 . + 0 ID=cds-RUP95080.1;Parent=gene-D8M19_02080;Dbxref=NCBI_GP:RUP95080.1;Name=RUP95080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823735.1;locus_tag=D8M19_02080;product=quinone oxidoreductase;protein_id=RUP95080.1;transl_table=11 RBLY01000002.1 Genbank gene 47461 48378 . - . ID=gene-D8M19_02085;Name=D8M19_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02085 RBLY01000002.1 Protein Homology CDS 47461 48378 . - 0 ID=cds-RUP95081.1;Parent=gene-D8M19_02085;Dbxref=NCBI_GP:RUP95081.1;Name=RUP95081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823736.1;locus_tag=D8M19_02085;product=protoheme IX farnesyltransferase;protein_id=RUP95081.1;transl_table=11 RBLY01000002.1 Genbank gene 48654 51965 . + . ID=gene-D8M19_02090;Name=D8M19_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02090 RBLY01000002.1 Protein Homology CDS 48654 51965 . + 0 ID=cds-RUP95082.1;Parent=gene-D8M19_02090;Dbxref=NCBI_GP:RUP95082.1;Name=RUP95082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119591.1;locus_tag=D8M19_02090;product=transketolase;protein_id=RUP95082.1;transl_table=11 RBLY01000002.1 Genbank gene 52031 53557 . + . ID=gene-D8M19_02095;Name=D8M19_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02095 RBLY01000002.1 Protein Homology CDS 52031 53557 . + 0 ID=cds-RUP95083.1;Parent=gene-D8M19_02095;Dbxref=NCBI_GP:RUP95083.1;Name=RUP95083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823739.1;locus_tag=D8M19_02095;product=glucose-6-phosphate dehydrogenase;protein_id=RUP95083.1;transl_table=11 RBLY01000002.1 Genbank gene 53600 54547 . + . ID=gene-D8M19_02100;Name=D8M19_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02100 RBLY01000002.1 Protein Homology CDS 53600 54547 . + 0 ID=cds-RUP95084.1;Parent=gene-D8M19_02100;Dbxref=NCBI_GP:RUP95084.1;Name=RUP95084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186759.1;locus_tag=D8M19_02100;product=oxppcycle protein OpcA;protein_id=RUP95084.1;transl_table=11 RBLY01000002.1 Genbank gene 54552 55274 . + . ID=gene-D8M19_02105;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=D8M19_02105 RBLY01000002.1 Protein Homology CDS 54552 55274 . + 0 ID=cds-RUP95085.1;Parent=gene-D8M19_02105;Dbxref=NCBI_GP:RUP95085.1;Name=RUP95085.1;gbkey=CDS;gene=pgl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119594.1;locus_tag=D8M19_02105;product=6-phosphogluconolactonase;protein_id=RUP95085.1;transl_table=11 RBLY01000002.1 Genbank gene 55433 55669 . - . ID=gene-D8M19_02110;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=D8M19_02110 RBLY01000002.1 Protein Homology CDS 55433 55669 . - 0 ID=cds-RUP95086.1;Parent=gene-D8M19_02110;Dbxref=NCBI_GP:RUP95086.1;Name=RUP95086.1;gbkey=CDS;gene=secG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119595.1;locus_tag=D8M19_02110;product=preprotein translocase subunit SecG;protein_id=RUP95086.1;transl_table=11 RBLY01000002.1 Genbank gene 55869 56648 . - . ID=gene-D8M19_02115;Name=D8M19_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02115 RBLY01000002.1 Protein Homology CDS 55869 56648 . - 0 ID=cds-RUP95087.1;Parent=gene-D8M19_02115;Dbxref=NCBI_GP:RUP95087.1;Name=RUP95087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119596.1;locus_tag=D8M19_02115;product=triose-phosphate isomerase;protein_id=RUP95087.1;transl_table=11 RBLY01000002.1 Genbank gene 56691 57905 . - . ID=gene-D8M19_02120;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=D8M19_02120 RBLY01000002.1 Protein Homology CDS 56691 57905 . - 0 ID=cds-RUP95088.1;Parent=gene-D8M19_02120;Dbxref=NCBI_GP:RUP95088.1;Name=RUP95088.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651374.1;locus_tag=D8M19_02120;product=phosphoglycerate kinase;protein_id=RUP95088.1;transl_table=11 RBLY01000002.1 Genbank gene 57970 59016 . - . ID=gene-D8M19_02125;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=D8M19_02125 RBLY01000002.1 Protein Homology CDS 57970 59016 . - 0 ID=cds-RUP95089.1;Parent=gene-D8M19_02125;Dbxref=NCBI_GP:RUP95089.1;Name=RUP95089.1;gbkey=CDS;gene=gap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241965.1;locus_tag=D8M19_02125;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=RUP95089.1;transl_table=11 RBLY01000002.1 Genbank gene 59038 60078 . - . ID=gene-D8M19_02130;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=D8M19_02130 RBLY01000002.1 Protein Homology CDS 59038 60078 . - 0 ID=cds-RUP95090.1;Parent=gene-D8M19_02130;Dbxref=NCBI_GP:RUP95090.1;Name=RUP95090.1;gbkey=CDS;gene=whiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119599.1;locus_tag=D8M19_02130;product=DNA-binding protein WhiA;protein_id=RUP95090.1;transl_table=11 RBLY01000002.1 Genbank pseudogene 60146 61087 . - . ID=gene-D8M19_02135;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=pseudogene;locus_tag=D8M19_02135;pseudo=true RBLY01000002.1 Protein Homology CDS 60146 61087 . - 0 ID=cds-D8M19_02135;Parent=gene-D8M19_02135;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715024.1;locus_tag=D8M19_02135;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;pseudo=true;transl_table=11 RBLY01000002.1 Genbank gene 61307 62179 . - . ID=gene-D8M19_02140;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=D8M19_02140 RBLY01000002.1 Protein Homology CDS 61307 62179 . - 0 ID=cds-RUP95320.1;Parent=gene-D8M19_02140;Dbxref=NCBI_GP:RUP95320.1;Name=RUP95320.1;gbkey=CDS;gene=rapZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119601.1;locus_tag=D8M19_02140;product=RNase adapter RapZ;protein_id=RUP95320.1;transl_table=11 RBLY01000002.1 Genbank gene 62225 64258 . - . ID=gene-D8M19_02145;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=D8M19_02145 RBLY01000002.1 Protein Homology CDS 62225 64258 . - 0 ID=cds-RUP95091.1;Parent=gene-D8M19_02145;Dbxref=NCBI_GP:RUP95091.1;Name=RUP95091.1;gbkey=CDS;gene=uvrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021713.1;locus_tag=D8M19_02145;product=excinuclease ABC subunit UvrC;protein_id=RUP95091.1;transl_table=11 RBLY01000002.1 Genbank gene 64276 64836 . - . ID=gene-D8M19_02150;Name=D8M19_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02150 RBLY01000002.1 Protein Homology CDS 64276 64836 . - 0 ID=cds-RUP95092.1;Parent=gene-D8M19_02150;Dbxref=NCBI_GP:RUP95092.1;Name=RUP95092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119603.1;locus_tag=D8M19_02150;product=PH domain-containing protein;protein_id=RUP95092.1;transl_table=11 RBLY01000002.1 Genbank gene 64833 65345 . - . ID=gene-D8M19_02155;Name=D8M19_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02155 RBLY01000002.1 Protein Homology CDS 64833 65345 . - 0 ID=cds-RUP95093.1;Parent=gene-D8M19_02155;Dbxref=NCBI_GP:RUP95093.1;Name=RUP95093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600808.1;locus_tag=D8M19_02155;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=RUP95093.1;transl_table=11 RBLY01000002.1 Genbank gene 65396 66673 . - . ID=gene-D8M19_02160;Name=D8M19_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02160 RBLY01000002.1 Protein Homology CDS 65396 66673 . - 0 ID=cds-RUP95094.1;Parent=gene-D8M19_02160;Dbxref=NCBI_GP:RUP95094.1;Name=RUP95094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600809.1;locus_tag=D8M19_02160;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=RUP95094.1;transl_table=11 RBLY01000002.1 Genbank gene 66685 67425 . - . ID=gene-D8M19_02165;Name=D8M19_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02165 RBLY01000002.1 Protein Homology CDS 66685 67425 . - 0 ID=cds-RUP95095.1;Parent=gene-D8M19_02165;Dbxref=NCBI_GP:RUP95095.1;Name=RUP95095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119606.1;locus_tag=D8M19_02165;product=riboflavin synthase;protein_id=RUP95095.1;transl_table=11 RBLY01000002.1 Genbank gene 67450 68520 . - . ID=gene-D8M19_02170;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=D8M19_02170 RBLY01000002.1 Protein Homology CDS 67450 68520 . - 0 ID=cds-RUP95096.1;Parent=gene-D8M19_02170;Dbxref=NCBI_GP:RUP95096.1;Name=RUP95096.1;gbkey=CDS;gene=ribD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119607.1;locus_tag=D8M19_02170;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=RUP95096.1;transl_table=11 RBLY01000002.1 Genbank gene 68521 69270 . - . ID=gene-D8M19_02175;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=D8M19_02175 RBLY01000002.1 Protein Homology CDS 68521 69270 . - 0 ID=cds-RUP95097.1;Parent=gene-D8M19_02175;Dbxref=NCBI_GP:RUP95097.1;Name=RUP95097.1;gbkey=CDS;gene=rpe;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856010.1;locus_tag=D8M19_02175;product=ribulose-phosphate 3-epimerase;protein_id=RUP95097.1;transl_table=11 RBLY01000002.1 Genbank gene 69316 70908 . - . ID=gene-D8M19_02180;Name=D8M19_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02180 RBLY01000002.1 Protein Homology CDS 69316 70908 . - 0 ID=cds-RUP95098.1;Parent=gene-D8M19_02180;Dbxref=NCBI_GP:RUP95098.1;Name=RUP95098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119609.1;locus_tag=D8M19_02180;product=MFS transporter;protein_id=RUP95098.1;transl_table=11 RBLY01000002.1 Genbank gene 70905 71864 . - . ID=gene-D8M19_02185;Name=D8M19_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02185 RBLY01000002.1 Protein Homology CDS 70905 71864 . - 0 ID=cds-RUP95099.1;Parent=gene-D8M19_02185;Dbxref=NCBI_GP:RUP95099.1;Name=RUP95099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119610.1;locus_tag=D8M19_02185;product=methionyl-tRNA formyltransferase;protein_id=RUP95099.1;transl_table=11 RBLY01000002.1 Genbank gene 71919 73994 . - . ID=gene-D8M19_02190;Name=D8M19_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02190 RBLY01000002.1 Protein Homology CDS 71919 73994 . - 0 ID=cds-RUP95100.1;Parent=gene-D8M19_02190;Dbxref=NCBI_GP:RUP95100.1;Name=RUP95100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119611.1;locus_tag=D8M19_02190;product=primosomal protein N';protein_id=RUP95100.1;transl_table=11 RBLY01000002.1 Genbank gene 74012 75214 . - . ID=gene-D8M19_02195;Name=D8M19_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02195 RBLY01000002.1 Protein Homology CDS 74012 75214 . - 0 ID=cds-RUP95321.1;Parent=gene-D8M19_02195;Dbxref=NCBI_GP:RUP95321.1;Name=RUP95321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118836.1;locus_tag=D8M19_02195;product=methionine adenosyltransferase;protein_id=RUP95321.1;transl_table=11 RBLY01000002.1 Genbank gene 75386 76636 . - . ID=gene-D8M19_02200;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=D8M19_02200 RBLY01000002.1 Protein Homology CDS 75386 76636 . - 0 ID=cds-RUP95101.1;Parent=gene-D8M19_02200;Dbxref=NCBI_GP:RUP95101.1;Name=RUP95101.1;gbkey=CDS;gene=coaBC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295587.1;locus_tag=D8M19_02200;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=RUP95101.1;transl_table=11 RBLY01000002.1 Genbank gene 76663 78285 . - . ID=gene-D8M19_02205;Name=D8M19_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02205 RBLY01000002.1 Protein Homology CDS 76663 78285 . - 0 ID=cds-RUP95102.1;Parent=gene-D8M19_02205;Dbxref=NCBI_GP:RUP95102.1;Name=RUP95102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00474.15;locus_tag=D8M19_02205;product=sodium:solute symporter family protein;protein_id=RUP95102.1;transl_table=11 RBLY01000002.1 Genbank gene 78711 78992 . - . ID=gene-D8M19_02210;Name=D8M19_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02210 RBLY01000002.1 Protein Homology CDS 78711 78992 . - 0 ID=cds-RUP95103.1;Parent=gene-D8M19_02210;Dbxref=NCBI_GP:RUP95103.1;Name=RUP95103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119616.1;locus_tag=D8M19_02210;product=DNA-directed RNA polymerase subunit omega;protein_id=RUP95103.1;transl_table=11 RBLY01000002.1 Genbank gene 79059 79628 . - . ID=gene-D8M19_02215;Name=D8M19_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02215 RBLY01000002.1 Protein Homology CDS 79059 79628 . - 0 ID=cds-RUP95104.1;Parent=gene-D8M19_02215;Dbxref=NCBI_GP:RUP95104.1;Name=RUP95104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119617.1;locus_tag=D8M19_02215;product=guanylate kinase;protein_id=RUP95104.1;transl_table=11 RBLY01000002.1 Genbank gene 79634 79957 . - . ID=gene-D8M19_02220;Name=D8M19_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02220 RBLY01000002.1 Protein Homology CDS 79634 79957 . - 0 ID=cds-RUP95105.1;Parent=gene-D8M19_02220;Dbxref=NCBI_GP:RUP95105.1;Name=RUP95105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241984.1;locus_tag=D8M19_02220;product=integration host factor;protein_id=RUP95105.1;transl_table=11 RBLY01000002.1 Genbank gene 80254 81093 . - . ID=gene-D8M19_02225;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=D8M19_02225 RBLY01000002.1 Protein Homology CDS 80254 81093 . - 0 ID=cds-RUP95106.1;Parent=gene-D8M19_02225;Dbxref=NCBI_GP:RUP95106.1;Name=RUP95106.1;gbkey=CDS;gene=pyrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186802.1;locus_tag=D8M19_02225;product=orotidine-5'-phosphate decarboxylase;protein_id=RUP95106.1;transl_table=11 RBLY01000002.1 Genbank gene 81083 84418 . - . ID=gene-D8M19_02230;Name=D8M19_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02230 RBLY01000002.1 Protein Homology CDS 81083 84418 . - 0 ID=cds-RUP95107.1;Parent=gene-D8M19_02230;Dbxref=NCBI_GP:RUP95107.1;Name=RUP95107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119620.1;locus_tag=D8M19_02230;product=carbamoyl-phosphate synthase large subunit;protein_id=RUP95107.1;transl_table=11 RBLY01000002.1 Genbank gene 84421 85629 . - . ID=gene-D8M19_02235;Name=D8M19_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02235 RBLY01000002.1 Protein Homology CDS 84421 85629 . - 0 ID=cds-RUP95108.1;Parent=gene-D8M19_02235;Dbxref=NCBI_GP:RUP95108.1;Name=RUP95108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119621.1;locus_tag=D8M19_02235;product=carbamoyl-phosphate synthase small subunit;protein_id=RUP95108.1;transl_table=11 RBLY01000002.1 Genbank gene 85696 87033 . - . ID=gene-D8M19_02240;Name=D8M19_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02240 RBLY01000002.1 Protein Homology CDS 85696 87033 . - 0 ID=cds-RUP95322.1;Parent=gene-D8M19_02240;Dbxref=NCBI_GP:RUP95322.1;Name=RUP95322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186810.1;locus_tag=D8M19_02240;product=dihydroorotase;protein_id=RUP95322.1;transl_table=11 RBLY01000002.1 Genbank gene 87168 88103 . - . ID=gene-D8M19_02245;Name=D8M19_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02245 RBLY01000002.1 Protein Homology CDS 87168 88103 . - 0 ID=cds-RUP95109.1;Parent=gene-D8M19_02245;Dbxref=NCBI_GP:RUP95109.1;Name=RUP95109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119623.1;locus_tag=D8M19_02245;product=aspartate carbamoyltransferase catalytic subunit;protein_id=RUP95109.1;transl_table=11 RBLY01000002.1 Genbank gene 88103 88738 . - . ID=gene-D8M19_02250;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=D8M19_02250 RBLY01000002.1 Protein Homology CDS 88103 88738 . - 0 ID=cds-RUP95110.1;Parent=gene-D8M19_02250;Dbxref=NCBI_GP:RUP95110.1;Name=RUP95110.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821604.1;locus_tag=D8M19_02250;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=RUP95110.1;transl_table=11 RBLY01000002.1 Genbank gene 88849 90231 . + . ID=gene-D8M19_02255;Name=D8M19_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02255 RBLY01000002.1 Protein Homology CDS 88849 90231 . + 0 ID=cds-RUP95111.1;Parent=gene-D8M19_02255;Dbxref=NCBI_GP:RUP95111.1;Name=RUP95111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186816.1;locus_tag=D8M19_02255;product=TIGR01777 family protein;protein_id=RUP95111.1;transl_table=11 RBLY01000002.1 Genbank gene 90404 90922 . + . ID=gene-D8M19_02260;Name=D8M19_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02260 RBLY01000002.1 Protein Homology CDS 90404 90922 . + 0 ID=cds-RUP95112.1;Parent=gene-D8M19_02260;Dbxref=NCBI_GP:RUP95112.1;Name=RUP95112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119626.1;locus_tag=D8M19_02260;product=YbjN domain-containing protein;protein_id=RUP95112.1;transl_table=11 RBLY01000002.1 Genbank gene 90939 91391 . + . ID=gene-D8M19_02265;Name=D8M19_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02265 RBLY01000002.1 Protein Homology CDS 90939 91391 . + 0 ID=cds-RUP95113.1;Parent=gene-D8M19_02265;Dbxref=NCBI_GP:RUP95113.1;Name=RUP95113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119627.1;locus_tag=D8M19_02265;product=hypothetical protein;protein_id=RUP95113.1;transl_table=11 RBLY01000002.1 Genbank gene 91394 92281 . - . ID=gene-D8M19_02270;Name=D8M19_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02270 RBLY01000002.1 Protein Homology CDS 91394 92281 . - 0 ID=cds-RUP95114.1;Parent=gene-D8M19_02270;Dbxref=NCBI_GP:RUP95114.1;Name=RUP95114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845709.1;locus_tag=D8M19_02270;product=PPK2 family polyphosphate--nucleotide phosphotransferase;protein_id=RUP95114.1;transl_table=11 RBLY01000002.1 Genbank gene 92288 92836 . - . ID=gene-D8M19_02275;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=D8M19_02275 RBLY01000002.1 Protein Homology CDS 92288 92836 . - 0 ID=cds-RUP95115.1;Parent=gene-D8M19_02275;Dbxref=NCBI_GP:RUP95115.1;Name=RUP95115.1;gbkey=CDS;gene=nusB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119629.1;locus_tag=D8M19_02275;product=transcription antitermination factor NusB;protein_id=RUP95115.1;transl_table=11 RBLY01000002.1 Genbank gene 92847 93410 . - . ID=gene-D8M19_02280;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=D8M19_02280 RBLY01000002.1 Protein Homology CDS 92847 93410 . - 0 ID=cds-RUP95116.1;Parent=gene-D8M19_02280;Dbxref=NCBI_GP:RUP95116.1;Name=RUP95116.1;gbkey=CDS;gene=efp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190126.1;locus_tag=D8M19_02280;product=elongation factor P;protein_id=RUP95116.1;transl_table=11 RBLY01000002.1 Genbank gene 93525 94616 . - . ID=gene-D8M19_02285;Name=D8M19_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02285 RBLY01000002.1 Protein Homology CDS 93525 94616 . - 0 ID=cds-RUP95117.1;Parent=gene-D8M19_02285;Dbxref=NCBI_GP:RUP95117.1;Name=RUP95117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119631.1;locus_tag=D8M19_02285;product=aminopeptidase P family protein;protein_id=RUP95117.1;transl_table=11 RBLY01000002.1 Genbank gene 94726 95205 . - . ID=gene-D8M19_02290;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=D8M19_02290 RBLY01000002.1 Protein Homology CDS 94726 95205 . - 0 ID=cds-RUP95118.1;Parent=gene-D8M19_02290;Dbxref=NCBI_GP:RUP95118.1;Name=RUP95118.1;gbkey=CDS;gene=aroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005511462.1;locus_tag=D8M19_02290;product=type II 3-dehydroquinate dehydratase;protein_id=RUP95118.1;transl_table=11 RBLY01000002.1 Genbank gene 95214 96341 . - . ID=gene-D8M19_02295;Name=D8M19_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02295 RBLY01000002.1 Protein Homology CDS 95214 96341 . - 0 ID=cds-RUP95119.1;Parent=gene-D8M19_02295;Dbxref=NCBI_GP:RUP95119.1;Name=RUP95119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119633.1;locus_tag=D8M19_02295;product=3-dehydroquinate synthase;protein_id=RUP95119.1;transl_table=11 RBLY01000002.1 Genbank gene 96365 96898 . - . ID=gene-D8M19_02300;Name=D8M19_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02300 RBLY01000002.1 Protein Homology CDS 96365 96898 . - 0 ID=cds-RUP95120.1;Parent=gene-D8M19_02300;Dbxref=NCBI_GP:RUP95120.1;Name=RUP95120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934992.1;locus_tag=D8M19_02300;product=shikimate kinase;protein_id=RUP95120.1;transl_table=11 RBLY01000002.1 Genbank gene 96895 98154 . - . ID=gene-D8M19_02305;Name=D8M19_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02305 RBLY01000002.1 Protein Homology CDS 96895 98154 . - 0 ID=cds-RUP95323.1;Parent=gene-D8M19_02305;Dbxref=NCBI_GP:RUP95323.1;Name=RUP95323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119635.1;locus_tag=D8M19_02305;product=chorismate synthase;protein_id=RUP95323.1;transl_table=11 RBLY01000002.1 Genbank gene 98163 98621 . - . ID=gene-D8M19_02310;Name=D8M19_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02310 RBLY01000002.1 Protein Homology CDS 98163 98621 . - 0 ID=cds-RUP95121.1;Parent=gene-D8M19_02310;Dbxref=NCBI_GP:RUP95121.1;Name=RUP95121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01478.16;locus_tag=D8M19_02310;product=prepilin peptidase;protein_id=RUP95121.1;transl_table=11 RBLY01000002.1 Genbank gene 98672 99517 . - . ID=gene-D8M19_02315;Name=D8M19_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02315 RBLY01000002.1 Protein Homology CDS 98672 99517 . - 0 ID=cds-RUP95122.1;Parent=gene-D8M19_02315;Dbxref=NCBI_GP:RUP95122.1;Name=RUP95122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018339862.1;locus_tag=D8M19_02315;product=shikimate dehydrogenase;protein_id=RUP95122.1;transl_table=11 RBLY01000002.1 Genbank gene 99510 100706 . - . ID=gene-D8M19_02320;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=D8M19_02320 RBLY01000002.1 Protein Homology CDS 99510 100706 . - 0 ID=cds-RUP95123.1;Parent=gene-D8M19_02320;Dbxref=NCBI_GP:RUP95123.1;Name=RUP95123.1;gbkey=CDS;gene=mltG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119638.1;locus_tag=D8M19_02320;product=endolytic transglycosylase MltG;protein_id=RUP95123.1;transl_table=11 RBLY01000002.1 Genbank gene 100722 101252 . - . ID=gene-D8M19_02325;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=D8M19_02325 RBLY01000002.1 Protein Homology CDS 100722 101252 . - 0 ID=cds-RUP95124.1;Parent=gene-D8M19_02325;Dbxref=NCBI_GP:RUP95124.1;Name=RUP95124.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242004.1;locus_tag=D8M19_02325;product=Holliday junction resolvase RuvX;protein_id=RUP95124.1;transl_table=11 RBLY01000002.1 Genbank gene 101387 104059 . - . ID=gene-D8M19_02330;Name=D8M19_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02330 RBLY01000002.1 Protein Homology CDS 101387 104059 . - 0 ID=cds-RUP95125.1;Parent=gene-D8M19_02330;Dbxref=NCBI_GP:RUP95125.1;Name=RUP95125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823621.1;locus_tag=D8M19_02330;product=alanine--tRNA ligase;protein_id=RUP95125.1;transl_table=11 RBLY01000002.1 Genbank gene 104126 105568 . - . ID=gene-D8M19_02335;Name=D8M19_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02335 RBLY01000002.1 Protein Homology CDS 104126 105568 . - 0 ID=cds-RUP95126.1;Parent=gene-D8M19_02335;Dbxref=NCBI_GP:RUP95126.1;Name=RUP95126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119641.1;locus_tag=D8M19_02335;product=replication-associated recombination protein A;protein_id=RUP95126.1;transl_table=11 RBLY01000002.1 Genbank gene 105568 106779 . - . ID=gene-D8M19_02340;Name=D8M19_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02340 RBLY01000002.1 Protein Homology CDS 105568 106779 . - 0 ID=cds-RUP95127.1;Parent=gene-D8M19_02340;Dbxref=NCBI_GP:RUP95127.1;Name=RUP95127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119642.1;locus_tag=D8M19_02340;product=phosphotransferase;protein_id=RUP95127.1;transl_table=11 RBLY01000002.1 Genbank gene 106906 108711 . - . ID=gene-D8M19_02345;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=D8M19_02345 RBLY01000002.1 Protein Homology CDS 106906 108711 . - 0 ID=cds-RUP95324.1;Parent=gene-D8M19_02345;Dbxref=NCBI_GP:RUP95324.1;Name=RUP95324.1;gbkey=CDS;gene=aspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014523357.1;locus_tag=D8M19_02345;product=aspartate--tRNA ligase;protein_id=RUP95324.1;transl_table=11 RBLY01000002.1 Genbank gene 109103 110512 . + . ID=gene-D8M19_02350;Name=D8M19_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02350 RBLY01000002.1 Protein Homology CDS 109103 110512 . + 0 ID=cds-RUP95128.1;Parent=gene-D8M19_02350;Dbxref=NCBI_GP:RUP95128.1;Name=RUP95128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190153.1;locus_tag=D8M19_02350;product=L-serine ammonia-lyase;protein_id=RUP95128.1;transl_table=11 RBLY01000002.1 Genbank gene 110509 111783 . - . ID=gene-D8M19_02355;Name=D8M19_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02355 RBLY01000002.1 Protein Homology CDS 110509 111783 . - 0 ID=cds-RUP95129.1;Parent=gene-D8M19_02355;Dbxref=NCBI_GP:RUP95129.1;Name=RUP95129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119645.1;locus_tag=D8M19_02355;product=histidine--tRNA ligase;protein_id=RUP95129.1;transl_table=11 RBLY01000002.1 Genbank gene 111795 112448 . - . ID=gene-D8M19_02360;Name=D8M19_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02360 RBLY01000002.1 Protein Homology CDS 111795 112448 . - 0 ID=cds-RUP95130.1;Parent=gene-D8M19_02360;Dbxref=NCBI_GP:RUP95130.1;Name=RUP95130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119646.1;locus_tag=D8M19_02360;product=MBL fold metallo-hydrolase;protein_id=RUP95130.1;transl_table=11 RBLY01000002.1 Genbank gene 112500 113000 . - . ID=gene-D8M19_02365;Name=D8M19_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02365 RBLY01000002.1 Protein Homology CDS 112500 113000 . - 0 ID=cds-RUP95325.1;Parent=gene-D8M19_02365;Dbxref=NCBI_GP:RUP95325.1;Name=RUP95325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851706.1;locus_tag=D8M19_02365;product=thiol peroxidase;protein_id=RUP95325.1;transl_table=11 RBLY01000002.1 Genbank gene 113223 114095 . + . ID=gene-D8M19_02370;Name=D8M19_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02370 RBLY01000002.1 Protein Homology CDS 113223 114095 . + 0 ID=cds-RUP95131.1;Parent=gene-D8M19_02370;Dbxref=NCBI_GP:RUP95131.1;Name=RUP95131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119648.1;locus_tag=D8M19_02370;product=peptidylprolyl isomerase;protein_id=RUP95131.1;transl_table=11 RBLY01000002.1 Genbank gene 114197 114538 . + . ID=gene-D8M19_02375;Name=D8M19_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02375 RBLY01000002.1 GeneMarkS+ CDS 114197 114538 . + 0 ID=cds-RUP95132.1;Parent=gene-D8M19_02375;Dbxref=NCBI_GP:RUP95132.1;Name=RUP95132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02375;product=hypothetical protein;protein_id=RUP95132.1;transl_table=11 RBLY01000002.1 Genbank gene 114740 117031 . - . ID=gene-D8M19_02380;Name=D8M19_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02380 RBLY01000002.1 Protein Homology CDS 114740 117031 . - 0 ID=cds-RUP95133.1;Parent=gene-D8M19_02380;Dbxref=NCBI_GP:RUP95133.1;Name=RUP95133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190167.1;locus_tag=D8M19_02380;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=RUP95133.1;transl_table=11 RBLY01000002.1 Genbank gene 117050 117616 . - . ID=gene-D8M19_02385;Name=D8M19_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02385 RBLY01000002.1 Protein Homology CDS 117050 117616 . - 0 ID=cds-RUP95134.1;Parent=gene-D8M19_02385;Dbxref=NCBI_GP:RUP95134.1;Name=RUP95134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119651.1;locus_tag=D8M19_02385;product=adenine phosphoribosyltransferase;protein_id=RUP95134.1;transl_table=11 RBLY01000002.1 Genbank gene 117759 119633 . - . ID=gene-D8M19_02390;Name=D8M19_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02390 RBLY01000002.1 Protein Homology CDS 117759 119633 . - 0 ID=cds-RUP95135.1;Parent=gene-D8M19_02390;Dbxref=NCBI_GP:RUP95135.1;Name=RUP95135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00496.20;locus_tag=D8M19_02390;product=peptide ABC transporter;protein_id=RUP95135.1;transl_table=11 RBLY01000002.1 Genbank gene 119581 120789 . - . ID=gene-D8M19_02395;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=D8M19_02395 RBLY01000002.1 Protein Homology CDS 119581 120789 . - 0 ID=cds-RUP95136.1;Parent=gene-D8M19_02395;Dbxref=NCBI_GP:RUP95136.1;Name=RUP95136.1;gbkey=CDS;gene=secF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119653.1;locus_tag=D8M19_02395;product=protein translocase subunit SecF;protein_id=RUP95136.1;transl_table=11 RBLY01000002.1 Genbank gene 120725 122542 . - . ID=gene-D8M19_02400;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=D8M19_02400 RBLY01000002.1 Protein Homology CDS 120725 122542 . - 0 ID=cds-RUP95137.1;Parent=gene-D8M19_02400;Dbxref=NCBI_GP:RUP95137.1;Name=RUP95137.1;gbkey=CDS;gene=secD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283295.1;locus_tag=D8M19_02400;product=protein translocase subunit SecD;protein_id=RUP95137.1;transl_table=11 RBLY01000002.1 Genbank gene 122591 122917 . - . ID=gene-D8M19_02405;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=D8M19_02405 RBLY01000002.1 Protein Homology CDS 122591 122917 . - 0 ID=cds-RUP95138.1;Parent=gene-D8M19_02405;Dbxref=NCBI_GP:RUP95138.1;Name=RUP95138.1;gbkey=CDS;gene=yajC;inference=COORDINATES: protein motif:HMM:PF02699.13;locus_tag=D8M19_02405;product=preprotein translocase subunit YajC;protein_id=RUP95138.1;transl_table=11 RBLY01000002.1 Genbank gene 123056 124177 . - . ID=gene-D8M19_02410;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=D8M19_02410 RBLY01000002.1 Protein Homology CDS 123056 124177 . - 0 ID=cds-RUP95139.1;Parent=gene-D8M19_02410;Dbxref=NCBI_GP:RUP95139.1;Name=RUP95139.1;gbkey=CDS;gene=ruvB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119656.1;locus_tag=D8M19_02410;product=Holliday junction branch migration DNA helicase RuvB;protein_id=RUP95139.1;transl_table=11 RBLY01000002.1 Genbank gene 124200 124832 . - . ID=gene-D8M19_02415;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=D8M19_02415 RBLY01000002.1 Protein Homology CDS 124200 124832 . - 0 ID=cds-RUP95140.1;Parent=gene-D8M19_02415;Dbxref=NCBI_GP:RUP95140.1;Name=RUP95140.1;gbkey=CDS;gene=ruvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190175.1;locus_tag=D8M19_02415;product=Holliday junction branch migration protein RuvA;protein_id=RUP95140.1;transl_table=11 RBLY01000002.1 Genbank gene 124840 125379 . - . ID=gene-D8M19_02420;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=D8M19_02420 RBLY01000002.1 Protein Homology CDS 124840 125379 . - 0 ID=cds-RUP95141.1;Parent=gene-D8M19_02420;Dbxref=NCBI_GP:RUP95141.1;Name=RUP95141.1;gbkey=CDS;gene=ruvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119658.1;locus_tag=D8M19_02420;product=crossover junction endodeoxyribonuclease RuvC;protein_id=RUP95141.1;transl_table=11 RBLY01000002.1 Genbank gene 125385 126140 . - . ID=gene-D8M19_02425;Name=D8M19_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02425 RBLY01000002.1 Protein Homology CDS 125385 126140 . - 0 ID=cds-RUP95142.1;Parent=gene-D8M19_02425;Dbxref=NCBI_GP:RUP95142.1;Name=RUP95142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278990.1;locus_tag=D8M19_02425;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=RUP95142.1;transl_table=11 RBLY01000002.1 Genbank gene 126606 127082 . + . ID=gene-D8M19_02430;Name=D8M19_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02430 RBLY01000002.1 Protein Homology CDS 126606 127082 . + 0 ID=cds-RUP95143.1;Parent=gene-D8M19_02430;Dbxref=NCBI_GP:RUP95143.1;Name=RUP95143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119661.1;locus_tag=D8M19_02430;product=DUF3817 domain-containing protein;protein_id=RUP95143.1;transl_table=11 RBLY01000002.1 Genbank gene 127138 127662 . - . ID=gene-D8M19_02435;Name=D8M19_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02435 RBLY01000002.1 Protein Homology CDS 127138 127662 . - 0 ID=cds-RUP95144.1;Parent=gene-D8M19_02435;Dbxref=NCBI_GP:RUP95144.1;Name=RUP95144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119662.1;locus_tag=D8M19_02435;product=hypothetical protein;protein_id=RUP95144.1;transl_table=11 RBLY01000002.1 Genbank gene 127659 128756 . - . ID=gene-D8M19_02440;Name=D8M19_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02440 RBLY01000002.1 Protein Homology CDS 127659 128756 . - 0 ID=cds-RUP95145.1;Parent=gene-D8M19_02440;Dbxref=NCBI_GP:RUP95145.1;Name=RUP95145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278983.1;locus_tag=D8M19_02440;product=glycosyltransferase family 1 protein;protein_id=RUP95145.1;transl_table=11 RBLY01000002.1 Genbank gene 128768 129745 . - . ID=gene-D8M19_02445;Name=D8M19_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02445 RBLY01000002.1 Protein Homology CDS 128768 129745 . - 0 ID=cds-RUP95146.1;Parent=gene-D8M19_02445;Dbxref=NCBI_GP:RUP95146.1;Name=RUP95146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283320.1;locus_tag=D8M19_02445;product=phosphatidylinositol mannoside acyltransferase;protein_id=RUP95146.1;transl_table=11 RBLY01000002.1 Genbank gene 129742 130365 . - . ID=gene-D8M19_02450;Name=D8M19_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02450 RBLY01000002.1 Protein Homology CDS 129742 130365 . - 0 ID=cds-RUP95147.1;Parent=gene-D8M19_02450;Dbxref=NCBI_GP:RUP95147.1;Name=RUP95147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651452.1;locus_tag=D8M19_02450;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=RUP95147.1;transl_table=11 RBLY01000002.1 Genbank gene 130358 130960 . - . ID=gene-D8M19_02455;Name=D8M19_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02455 RBLY01000002.1 Protein Homology CDS 130358 130960 . - 0 ID=cds-RUP95148.1;Parent=gene-D8M19_02455;Dbxref=NCBI_GP:RUP95148.1;Name=RUP95148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529196.1;locus_tag=D8M19_02455;product=HIT domain-containing protein;protein_id=RUP95148.1;transl_table=11 RBLY01000002.1 Genbank gene 130923 132986 . - . ID=gene-D8M19_02460;Name=D8M19_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02460 RBLY01000002.1 Protein Homology CDS 130923 132986 . - 0 ID=cds-RUP95149.1;Parent=gene-D8M19_02460;Dbxref=NCBI_GP:RUP95149.1;Name=RUP95149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119667.1;locus_tag=D8M19_02460;product=threonine--tRNA ligase;protein_id=RUP95149.1;transl_table=11 RBLY01000002.1 Genbank gene 133136 134356 . - . ID=gene-D8M19_02465;Name=D8M19_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02465 RBLY01000002.1 Protein Homology CDS 133136 134356 . - 0 ID=cds-RUP95326.1;Parent=gene-D8M19_02465;Dbxref=NCBI_GP:RUP95326.1;Name=RUP95326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581297.1;locus_tag=D8M19_02465;product=Dyp-type peroxidase;protein_id=RUP95326.1;transl_table=11 RBLY01000002.1 Genbank gene 134514 135140 . - . ID=gene-D8M19_02470;Name=D8M19_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02470 RBLY01000002.1 Protein Homology CDS 134514 135140 . - 0 ID=cds-RUP95327.1;Parent=gene-D8M19_02470;Dbxref=NCBI_GP:RUP95327.1;Name=RUP95327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119669.1;locus_tag=D8M19_02470;product=copper chaperone PCu(A)C;protein_id=RUP95327.1;transl_table=11 RBLY01000002.1 Genbank gene 135262 135861 . - . ID=gene-D8M19_02475;Name=D8M19_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02475 RBLY01000002.1 Protein Homology CDS 135262 135861 . - 0 ID=cds-RUP95150.1;Parent=gene-D8M19_02475;Dbxref=NCBI_GP:RUP95150.1;Name=RUP95150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04234.10;locus_tag=D8M19_02475;product=hypothetical protein;protein_id=RUP95150.1;transl_table=11 RBLY01000002.1 Genbank gene 136073 136145 . - . ID=gene-D8M19_02480;Name=D8M19_02480;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02480 RBLY01000002.1 tRNAscan-SE tRNA 136073 136145 . - . ID=rna-D8M19_02480;Parent=gene-D8M19_02480;anticodon=(pos:complement(136110..136112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02480;product=tRNA-Gly RBLY01000002.1 tRNAscan-SE exon 136073 136145 . - . ID=exon-D8M19_02480-1;Parent=rna-D8M19_02480;anticodon=(pos:complement(136110..136112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02480;product=tRNA-Gly RBLY01000002.1 Genbank gene 136206 136278 . - . ID=gene-D8M19_02485;Name=D8M19_02485;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02485 RBLY01000002.1 tRNAscan-SE tRNA 136206 136278 . - . ID=rna-D8M19_02485;Parent=gene-D8M19_02485;anticodon=(pos:complement(136243..136245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02485;product=tRNA-Val RBLY01000002.1 tRNAscan-SE exon 136206 136278 . - . ID=exon-D8M19_02485-1;Parent=rna-D8M19_02485;anticodon=(pos:complement(136243..136245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02485;product=tRNA-Val RBLY01000002.1 Genbank gene 136309 136382 . - . ID=gene-D8M19_02490;Name=D8M19_02490;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02490 RBLY01000002.1 tRNAscan-SE tRNA 136309 136382 . - . ID=rna-D8M19_02490;Parent=gene-D8M19_02490;anticodon=(pos:complement(136348..136350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02490;product=tRNA-Cys RBLY01000002.1 tRNAscan-SE exon 136309 136382 . - . ID=exon-D8M19_02490-1;Parent=rna-D8M19_02490;anticodon=(pos:complement(136348..136350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02490;product=tRNA-Cys RBLY01000002.1 Genbank gene 136428 136500 . - . ID=gene-D8M19_02495;Name=D8M19_02495;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02495 RBLY01000002.1 tRNAscan-SE tRNA 136428 136500 . - . ID=rna-D8M19_02495;Parent=gene-D8M19_02495;anticodon=(pos:complement(136465..136467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02495;product=tRNA-Gly RBLY01000002.1 tRNAscan-SE exon 136428 136500 . - . ID=exon-D8M19_02495-1;Parent=rna-D8M19_02495;anticodon=(pos:complement(136465..136467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02495;product=tRNA-Gly RBLY01000002.1 Genbank gene 136531 136603 . - . ID=gene-D8M19_02500;Name=D8M19_02500;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02500 RBLY01000002.1 tRNAscan-SE tRNA 136531 136603 . - . ID=rna-D8M19_02500;Parent=gene-D8M19_02500;anticodon=(pos:complement(136568..136570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02500;product=tRNA-Val RBLY01000002.1 tRNAscan-SE exon 136531 136603 . - . ID=exon-D8M19_02500-1;Parent=rna-D8M19_02500;anticodon=(pos:complement(136568..136570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02500;product=tRNA-Val RBLY01000002.1 Genbank gene 136684 136756 . - . ID=gene-D8M19_02505;Name=D8M19_02505;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_02505 RBLY01000002.1 tRNAscan-SE tRNA 136684 136756 . - . ID=rna-D8M19_02505;Parent=gene-D8M19_02505;anticodon=(pos:complement(136721..136723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02505;product=tRNA-Gly RBLY01000002.1 tRNAscan-SE exon 136684 136756 . - . ID=exon-D8M19_02505-1;Parent=rna-D8M19_02505;anticodon=(pos:complement(136721..136723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_02505;product=tRNA-Gly RBLY01000002.1 Genbank gene 136931 137647 . + . ID=gene-D8M19_02510;Name=D8M19_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02510 RBLY01000002.1 Protein Homology CDS 136931 137647 . + 0 ID=cds-RUP95151.1;Parent=gene-D8M19_02510;Dbxref=NCBI_GP:RUP95151.1;Name=RUP95151.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01872.15;locus_tag=D8M19_02510;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=RUP95151.1;transl_table=11 RBLY01000002.1 Genbank gene 137647 138852 . + . ID=gene-D8M19_02515;Name=D8M19_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02515 RBLY01000002.1 Protein Homology CDS 137647 138852 . + 0 ID=cds-RUP95152.1;Parent=gene-D8M19_02515;Dbxref=NCBI_GP:RUP95152.1;Name=RUP95152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119672.1;locus_tag=D8M19_02515;product=DUF2029 domain-containing protein;protein_id=RUP95152.1;transl_table=11 RBLY01000002.1 Genbank gene 138948 139349 . + . ID=gene-D8M19_02520;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=D8M19_02520 RBLY01000002.1 Protein Homology CDS 138948 139349 . + 0 ID=cds-RUP95153.1;Parent=gene-D8M19_02520;Dbxref=NCBI_GP:RUP95153.1;Name=RUP95153.1;gbkey=CDS;gene=msrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851760.1;locus_tag=D8M19_02520;product=peptide-methionine (R)-S-oxide reductase;protein_id=RUP95153.1;transl_table=11 RBLY01000002.1 Genbank gene 139437 140171 . - . ID=gene-D8M19_02525;Name=D8M19_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02525 RBLY01000002.1 Protein Homology CDS 139437 140171 . - 0 ID=cds-RUP95154.1;Parent=gene-D8M19_02525;Dbxref=NCBI_GP:RUP95154.1;Name=RUP95154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119674.1;locus_tag=D8M19_02525;product=hypothetical protein;protein_id=RUP95154.1;transl_table=11 RBLY01000002.1 Genbank gene 140397 140999 . + . ID=gene-D8M19_02530;Name=D8M19_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02530 RBLY01000002.1 Protein Homology CDS 140397 140999 . + 0 ID=cds-RUP95328.1;Parent=gene-D8M19_02530;Dbxref=NCBI_GP:RUP95328.1;Name=RUP95328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767791.1;locus_tag=D8M19_02530;product=DUF3000 domain-containing protein;protein_id=RUP95328.1;transl_table=11 RBLY01000002.1 Genbank gene 141076 142299 . + . ID=gene-D8M19_02535;Name=D8M19_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02535 RBLY01000002.1 Protein Homology CDS 141076 142299 . + 0 ID=cds-RUP95155.1;Parent=gene-D8M19_02535;Dbxref=NCBI_GP:RUP95155.1;Name=RUP95155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00570.21%2CHMM:PF01612.18;locus_tag=D8M19_02535;product=ribonuclease D;protein_id=RUP95155.1;transl_table=11 RBLY01000002.1 Genbank gene 142271 144172 . - . ID=gene-D8M19_02540;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=D8M19_02540 RBLY01000002.1 Protein Homology CDS 142271 144172 . - 0 ID=cds-RUP95156.1;Parent=gene-D8M19_02540;Dbxref=NCBI_GP:RUP95156.1;Name=RUP95156.1;gbkey=CDS;gene=dxs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119677.1;locus_tag=D8M19_02540;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=RUP95156.1;transl_table=11 RBLY01000002.1 Genbank gene 144299 145531 . - . ID=gene-D8M19_02545;Name=D8M19_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02545 RBLY01000002.1 Protein Homology CDS 144299 145531 . - 0 ID=cds-RUP95157.1;Parent=gene-D8M19_02545;Dbxref=NCBI_GP:RUP95157.1;Name=RUP95157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119678.1;locus_tag=D8M19_02545;product=class I SAM-dependent RNA methyltransferase;protein_id=RUP95157.1;transl_table=11 RBLY01000002.1 Genbank gene 145528 146487 . - . ID=gene-D8M19_02550;Name=D8M19_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02550 RBLY01000002.1 Protein Homology CDS 145528 146487 . - 0 ID=cds-RUP95158.1;Parent=gene-D8M19_02550;Dbxref=NCBI_GP:RUP95158.1;Name=RUP95158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119679.1;locus_tag=D8M19_02550;product=DUF3710 domain-containing protein;protein_id=RUP95158.1;transl_table=11 RBLY01000002.1 Genbank gene 146593 147045 . - . ID=gene-D8M19_02555;Name=D8M19_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02555 RBLY01000002.1 Protein Homology CDS 146593 147045 . - 0 ID=cds-RUP95159.1;Parent=gene-D8M19_02555;Dbxref=NCBI_GP:RUP95159.1;Name=RUP95159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013415816.1;locus_tag=D8M19_02555;product=dUTP diphosphatase;protein_id=RUP95159.1;transl_table=11 RBLY01000002.1 Genbank gene 147180 147692 . + . ID=gene-D8M19_02560;Name=D8M19_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02560 RBLY01000002.1 Protein Homology CDS 147180 147692 . + 0 ID=cds-RUP95160.1;Parent=gene-D8M19_02560;Dbxref=NCBI_GP:RUP95160.1;Name=RUP95160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401066.1;locus_tag=D8M19_02560;product=DUF3093 domain-containing protein;protein_id=RUP95160.1;transl_table=11 RBLY01000002.1 Genbank gene 147781 148071 . - . ID=gene-D8M19_02565;Name=D8M19_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02565 RBLY01000002.1 Protein Homology CDS 147781 148071 . - 0 ID=cds-RUP95161.1;Parent=gene-D8M19_02565;Dbxref=NCBI_GP:RUP95161.1;Name=RUP95161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601114.1;locus_tag=D8M19_02565;product=DUF4193 domain-containing protein;protein_id=RUP95161.1;transl_table=11 RBLY01000002.1 Genbank gene 148192 149127 . - . ID=gene-D8M19_02570;Name=D8M19_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02570 RBLY01000002.1 Protein Homology CDS 148192 149127 . - 0 ID=cds-RUP95162.1;Parent=gene-D8M19_02570;Dbxref=NCBI_GP:RUP95162.1;Name=RUP95162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367182.1;locus_tag=D8M19_02570;product=inositol monophosphatase;protein_id=RUP95162.1;transl_table=11 RBLY01000002.1 Genbank gene 149212 149976 . + . ID=gene-D8M19_02575;Name=D8M19_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02575 RBLY01000002.1 Protein Homology CDS 149212 149976 . + 0 ID=cds-RUP95163.1;Parent=gene-D8M19_02575;Dbxref=NCBI_GP:RUP95163.1;Name=RUP95163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119685.1;locus_tag=D8M19_02575;product=ROK family protein;protein_id=RUP95163.1;transl_table=11 RBLY01000002.1 Genbank gene 150186 151538 . + . ID=gene-D8M19_02580;Name=D8M19_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02580 RBLY01000002.1 Protein Homology CDS 150186 151538 . + 0 ID=cds-RUP95329.1;Parent=gene-D8M19_02580;Dbxref=NCBI_GP:RUP95329.1;Name=RUP95329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190220.1;locus_tag=D8M19_02580;product=RNA polymerase sigma factor;protein_id=RUP95329.1;transl_table=11 RBLY01000002.1 Genbank gene 151665 152228 . - . ID=gene-D8M19_02585;Name=D8M19_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02585 RBLY01000002.1 GeneMarkS+ CDS 151665 152228 . - 0 ID=cds-RUP95164.1;Parent=gene-D8M19_02585;Dbxref=NCBI_GP:RUP95164.1;Name=RUP95164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02585;product=DUF456 domain-containing protein;protein_id=RUP95164.1;transl_table=11 RBLY01000002.1 Genbank gene 152370 154163 . - . ID=gene-D8M19_02590;Name=D8M19_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02590 RBLY01000002.1 Protein Homology CDS 152370 154163 . - 0 ID=cds-RUP95165.1;Parent=gene-D8M19_02590;Dbxref=NCBI_GP:RUP95165.1;Name=RUP95165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119688.1;locus_tag=D8M19_02590;product=DEAD/DEAH box helicase;protein_id=RUP95165.1;transl_table=11 RBLY01000002.1 Genbank gene 154223 154465 . - . ID=gene-D8M19_02595;Name=D8M19_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02595 RBLY01000002.1 Protein Homology CDS 154223 154465 . - 0 ID=cds-RUP95166.1;Parent=gene-D8M19_02595;Dbxref=NCBI_GP:RUP95166.1;Name=RUP95166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119689.1;locus_tag=D8M19_02595;product=DUF3039 domain-containing protein;protein_id=RUP95166.1;transl_table=11 RBLY01000002.1 Genbank gene 154525 154995 . + . ID=gene-D8M19_02600;Name=D8M19_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02600 RBLY01000002.1 Protein Homology CDS 154525 154995 . + 0 ID=cds-RUP95167.1;Parent=gene-D8M19_02600;Dbxref=NCBI_GP:RUP95167.1;Name=RUP95167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11298.6;locus_tag=D8M19_02600;product=DUF3099 domain-containing protein;protein_id=RUP95167.1;transl_table=11 RBLY01000002.1 Genbank gene 155039 156589 . + . ID=gene-D8M19_02605;Name=D8M19_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02605 RBLY01000002.1 Protein Homology CDS 155039 156589 . + 0 ID=cds-RUP95168.1;Parent=gene-D8M19_02605;Dbxref=NCBI_GP:RUP95168.1;Name=RUP95168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119691.1;locus_tag=D8M19_02605;product=methyltransferase domain-containing protein;protein_id=RUP95168.1;transl_table=11 RBLY01000002.1 Genbank pseudogene 156696 157137 . + . ID=gene-D8M19_02610;Name=D8M19_02610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_02610;pseudo=true RBLY01000002.1 Protein Homology CDS 156696 157137 . + 0 ID=cds-D8M19_02610;Parent=gene-D8M19_02610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119692.1;locus_tag=D8M19_02610;product=D-tyrosyl-tRNA(Tyr) deacylase;pseudo=true;transl_table=11 RBLY01000002.1 Genbank gene 157257 158252 . + . ID=gene-D8M19_02615;Name=D8M19_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02615 RBLY01000002.1 Protein Homology CDS 157257 158252 . + 0 ID=cds-RUP95169.1;Parent=gene-D8M19_02615;Dbxref=NCBI_GP:RUP95169.1;Name=RUP95169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190233.1;locus_tag=D8M19_02615;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP95169.1;transl_table=11 RBLY01000002.1 Genbank gene 158371 159051 . + . ID=gene-D8M19_02620;Name=D8M19_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02620 RBLY01000002.1 Protein Homology CDS 158371 159051 . + 0 ID=cds-RUP95170.1;Parent=gene-D8M19_02620;Dbxref=NCBI_GP:RUP95170.1;Name=RUP95170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190235.1;locus_tag=D8M19_02620;product=metal-dependent transcriptional regulator;protein_id=RUP95170.1;transl_table=11 RBLY01000002.1 Genbank gene 159100 160092 . + . ID=gene-D8M19_02625;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=D8M19_02625 RBLY01000002.1 Protein Homology CDS 159100 160092 . + 0 ID=cds-RUP95171.1;Parent=gene-D8M19_02625;Dbxref=NCBI_GP:RUP95171.1;Name=RUP95171.1;gbkey=CDS;gene=galE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845541.1;locus_tag=D8M19_02625;product=UDP-glucose 4-epimerase GalE;protein_id=RUP95171.1;transl_table=11 RBLY01000002.1 Genbank gene 160058 161203 . - . ID=gene-D8M19_02630;Name=D8M19_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02630 RBLY01000002.1 Protein Homology CDS 160058 161203 . - 0 ID=cds-RUP95172.1;Parent=gene-D8M19_02630;Dbxref=NCBI_GP:RUP95172.1;Name=RUP95172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13830.4;locus_tag=D8M19_02630;product=DUF4192 domain-containing protein;protein_id=RUP95172.1;transl_table=11 RBLY01000002.1 Genbank gene 161436 162389 . + . ID=gene-D8M19_02635;Name=D8M19_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02635 RBLY01000002.1 Protein Homology CDS 161436 162389 . + 0 ID=cds-RUP95173.1;Parent=gene-D8M19_02635;Dbxref=NCBI_GP:RUP95173.1;Name=RUP95173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020384542.1;locus_tag=D8M19_02635;product=PAC2 family protein;protein_id=RUP95173.1;transl_table=11 RBLY01000002.1 Genbank gene 162418 164967 . + . ID=gene-D8M19_02640;Name=D8M19_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02640 RBLY01000002.1 Protein Homology CDS 162418 164967 . + 0 ID=cds-RUP95330.1;Parent=gene-D8M19_02640;Dbxref=NCBI_GP:RUP95330.1;Name=RUP95330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401084.1;locus_tag=D8M19_02640;product=DUF3516 domain-containing protein;protein_id=RUP95330.1;transl_table=11 RBLY01000002.1 Genbank gene 165148 166110 . + . ID=gene-D8M19_02645;Name=D8M19_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02645 RBLY01000002.1 Protein Homology CDS 165148 166110 . + 0 ID=cds-RUP95174.1;Parent=gene-D8M19_02645;Dbxref=NCBI_GP:RUP95174.1;Name=RUP95174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190255.1;locus_tag=D8M19_02645;product=hydrogen peroxide-inducible genes activator;protein_id=RUP95174.1;transl_table=11 RBLY01000002.1 Genbank gene 166123 167097 . - . ID=gene-D8M19_02650;Name=D8M19_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02650 RBLY01000002.1 GeneMarkS+ CDS 166123 167097 . - 0 ID=cds-RUP95175.1;Parent=gene-D8M19_02650;Dbxref=NCBI_GP:RUP95175.1;Name=RUP95175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02650;product=hypothetical protein;protein_id=RUP95175.1;transl_table=11 RBLY01000002.1 Genbank gene 167294 171355 . + . ID=gene-D8M19_02655;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=D8M19_02655 RBLY01000002.1 Protein Homology CDS 167294 171355 . + 0 ID=cds-RUP95176.1;Parent=gene-D8M19_02655;Dbxref=NCBI_GP:RUP95176.1;Name=RUP95176.1;gbkey=CDS;gene=hrpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821793.1;locus_tag=D8M19_02655;product=ATP-dependent RNA helicase HrpA;protein_id=RUP95176.1;transl_table=11 RBLY01000002.1 Genbank gene 171391 171846 . - . ID=gene-D8M19_02660;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=D8M19_02660 RBLY01000002.1 Protein Homology CDS 171391 171846 . - 0 ID=cds-RUP95177.1;Parent=gene-D8M19_02660;Dbxref=NCBI_GP:RUP95177.1;Name=RUP95177.1;gbkey=CDS;gene=nrdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003851822.1;locus_tag=D8M19_02660;product=transcriptional repressor NrdR;protein_id=RUP95177.1;transl_table=11 RBLY01000002.1 Genbank gene 172570 173283 . + . ID=gene-D8M19_02665;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=D8M19_02665 RBLY01000002.1 Protein Homology CDS 172570 173283 . + 0 ID=cds-RUP95178.1;Parent=gene-D8M19_02665;Dbxref=NCBI_GP:RUP95178.1;Name=RUP95178.1;gbkey=CDS;gene=lexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119705.1;locus_tag=D8M19_02665;product=transcriptional repressor LexA;protein_id=RUP95178.1;transl_table=11 RBLY01000002.1 Genbank gene 173331 174110 . + . ID=gene-D8M19_02670;Name=D8M19_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02670 RBLY01000002.1 Protein Homology CDS 173331 174110 . + 0 ID=cds-RUP95179.1;Parent=gene-D8M19_02670;Dbxref=NCBI_GP:RUP95179.1;Name=RUP95179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119706.1;locus_tag=D8M19_02670;product=DeoR/GlpR transcriptional regulator;protein_id=RUP95179.1;transl_table=11 RBLY01000002.1 Genbank gene 174143 175405 . - . ID=gene-D8M19_02675;Name=D8M19_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02675 RBLY01000002.1 Protein Homology CDS 174143 175405 . - 0 ID=cds-RUP95180.1;Parent=gene-D8M19_02675;Dbxref=NCBI_GP:RUP95180.1;Name=RUP95180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020394.1;locus_tag=D8M19_02675;product=nitrate reductase;protein_id=RUP95180.1;transl_table=11 RBLY01000002.1 Genbank gene 175441 176835 . - . ID=gene-D8M19_02680;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=D8M19_02680 RBLY01000002.1 Protein Homology CDS 175441 176835 . - 0 ID=cds-RUP95331.1;Parent=gene-D8M19_02680;Dbxref=NCBI_GP:RUP95331.1;Name=RUP95331.1;gbkey=CDS;gene=hflX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845511.1;locus_tag=D8M19_02680;product=GTPase HflX;protein_id=RUP95331.1;transl_table=11 RBLY01000002.1 Genbank gene 177173 177949 . + . ID=gene-D8M19_02685;Name=D8M19_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02685 RBLY01000002.1 Protein Homology CDS 177173 177949 . + 0 ID=cds-RUP95181.1;Parent=gene-D8M19_02685;Dbxref=NCBI_GP:RUP95181.1;Name=RUP95181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119709.1;locus_tag=D8M19_02685;product=hypothetical protein;protein_id=RUP95181.1;transl_table=11 RBLY01000002.1 Genbank gene 178116 178610 . + . ID=gene-D8M19_02690;Name=D8M19_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02690 RBLY01000002.1 Protein Homology CDS 178116 178610 . + 0 ID=cds-RUP95332.1;Parent=gene-D8M19_02690;Dbxref=NCBI_GP:RUP95332.1;Name=RUP95332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401103.1;locus_tag=D8M19_02690;product=hypothetical protein;protein_id=RUP95332.1;transl_table=11 RBLY01000002.1 Genbank gene 178659 179540 . - . ID=gene-D8M19_02695;Name=D8M19_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02695 RBLY01000002.1 Protein Homology CDS 178659 179540 . - 0 ID=cds-RUP95182.1;Parent=gene-D8M19_02695;Dbxref=NCBI_GP:RUP95182.1;Name=RUP95182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601150.1;locus_tag=D8M19_02695;product=diaminopimelate epimerase;protein_id=RUP95182.1;transl_table=11 RBLY01000002.1 Genbank gene 179552 180532 . - . ID=gene-D8M19_02700;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=D8M19_02700 RBLY01000002.1 Protein Homology CDS 179552 180532 . - 0 ID=cds-RUP95183.1;Parent=gene-D8M19_02700;Dbxref=NCBI_GP:RUP95183.1;Name=RUP95183.1;gbkey=CDS;gene=miaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401105.1;locus_tag=D8M19_02700;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=RUP95183.1;transl_table=11 RBLY01000002.1 Genbank gene 180562 181353 . - . ID=gene-D8M19_02705;Name=D8M19_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02705 RBLY01000002.1 GeneMarkS+ CDS 180562 181353 . - 0 ID=cds-RUP95184.1;Parent=gene-D8M19_02705;Dbxref=NCBI_GP:RUP95184.1;Name=RUP95184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02705;product=hypothetical protein;protein_id=RUP95184.1;transl_table=11 RBLY01000002.1 Genbank gene 181553 182917 . + . ID=gene-D8M19_02710;Name=D8M19_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02710 RBLY01000002.1 Protein Homology CDS 181553 182917 . + 0 ID=cds-RUP95185.1;Parent=gene-D8M19_02710;Dbxref=NCBI_GP:RUP95185.1;Name=RUP95185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020384538.1;locus_tag=D8M19_02710;product=DUF349 domain-containing protein;protein_id=RUP95185.1;transl_table=11 RBLY01000002.1 Genbank gene 182936 184183 . + . ID=gene-D8M19_02715;Name=D8M19_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02715 RBLY01000002.1 GeneMarkS+ CDS 182936 184183 . + 0 ID=cds-RUP95186.1;Parent=gene-D8M19_02715;Dbxref=NCBI_GP:RUP95186.1;Name=RUP95186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02715;product=GNAT family acetyltransferase;protein_id=RUP95186.1;transl_table=11 RBLY01000002.1 Genbank gene 184180 184749 . - . ID=gene-D8M19_02720;Name=D8M19_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02720 RBLY01000002.1 GeneMarkS+ CDS 184180 184749 . - 0 ID=cds-RUP95187.1;Parent=gene-D8M19_02720;Dbxref=NCBI_GP:RUP95187.1;Name=RUP95187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02720;product=hypothetical protein;protein_id=RUP95187.1;transl_table=11 RBLY01000002.1 Genbank gene 184866 186404 . - . ID=gene-D8M19_02725;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=D8M19_02725 RBLY01000002.1 Protein Homology CDS 184866 186404 . - 0 ID=cds-RUP95333.1;Parent=gene-D8M19_02725;Dbxref=NCBI_GP:RUP95333.1;Name=RUP95333.1;gbkey=CDS;gene=miaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242107.1;locus_tag=D8M19_02725;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=RUP95333.1;transl_table=11 RBLY01000002.1 Genbank gene 186694 187632 . - . ID=gene-D8M19_02730;Name=D8M19_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02730 RBLY01000002.1 Protein Homology CDS 186694 187632 . - 0 ID=cds-RUP95188.1;Parent=gene-D8M19_02730;Dbxref=NCBI_GP:RUP95188.1;Name=RUP95188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010149017.1;locus_tag=D8M19_02730;product=proline/glycine betaine ABC transporter permease;protein_id=RUP95188.1;transl_table=11 RBLY01000002.1 Genbank gene 187632 188687 . - . ID=gene-D8M19_02735;Name=D8M19_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02735 RBLY01000002.1 Protein Homology CDS 187632 188687 . - 0 ID=cds-RUP95189.1;Parent=gene-D8M19_02735;Dbxref=NCBI_GP:RUP95189.1;Name=RUP95189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119720.1;locus_tag=D8M19_02735;product=ATP-binding cassette domain-containing protein;protein_id=RUP95189.1;transl_table=11 RBLY01000002.1 Genbank gene 188959 189606 . - . ID=gene-D8M19_02740;Name=D8M19_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02740 RBLY01000002.1 Protein Homology CDS 188959 189606 . - 0 ID=cds-RUP95334.1;Parent=gene-D8M19_02740;Dbxref=NCBI_GP:RUP95334.1;Name=RUP95334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278856.1;locus_tag=D8M19_02740;product=recombination regulator RecX;protein_id=RUP95334.1;transl_table=11 RBLY01000002.1 Genbank gene 189590 190741 . - . ID=gene-D8M19_02745;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=D8M19_02745 RBLY01000002.1 Protein Homology CDS 189590 190741 . - 0 ID=cds-RUP95190.1;Parent=gene-D8M19_02745;Dbxref=NCBI_GP:RUP95190.1;Name=RUP95190.1;gbkey=CDS;gene=recA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119722.1;locus_tag=D8M19_02745;product=recombinase RecA;protein_id=RUP95190.1;transl_table=11 RBLY01000002.1 Genbank gene 190950 191165 . - . ID=gene-D8M19_02750;Name=D8M19_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02750 RBLY01000002.1 Protein Homology CDS 190950 191165 . - 0 ID=cds-RUP95191.1;Parent=gene-D8M19_02750;Dbxref=NCBI_GP:RUP95191.1;Name=RUP95191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119723.1;locus_tag=D8M19_02750;product=DUF3046 domain-containing protein;protein_id=RUP95191.1;transl_table=11 RBLY01000002.1 Genbank gene 191211 192086 . - . ID=gene-D8M19_02755;Name=D8M19_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02755 RBLY01000002.1 Protein Homology CDS 191211 192086 . - 0 ID=cds-RUP95192.1;Parent=gene-D8M19_02755;Dbxref=NCBI_GP:RUP95192.1;Name=RUP95192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651519.1;locus_tag=D8M19_02755;product=PspA/IM30 family protein;protein_id=RUP95192.1;transl_table=11 RBLY01000002.1 Genbank gene 192196 192570 . - . ID=gene-D8M19_02760;Name=D8M19_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02760 RBLY01000002.1 Protein Homology CDS 192196 192570 . - 0 ID=cds-RUP95193.1;Parent=gene-D8M19_02760;Dbxref=NCBI_GP:RUP95193.1;Name=RUP95193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119725.1;locus_tag=D8M19_02760;product=XRE family transcriptional regulator;protein_id=RUP95193.1;transl_table=11 RBLY01000002.1 Genbank gene 192743 193219 . - . ID=gene-D8M19_02765;Name=D8M19_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02765 RBLY01000002.1 Protein Homology CDS 192743 193219 . - 0 ID=cds-RUP95335.1;Parent=gene-D8M19_02765;Dbxref=NCBI_GP:RUP95335.1;Name=RUP95335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601170.1;locus_tag=D8M19_02765;product=CinA family protein;protein_id=RUP95335.1;transl_table=11 RBLY01000002.1 Genbank gene 193245 193805 . - . ID=gene-D8M19_02770;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=D8M19_02770 RBLY01000002.1 Protein Homology CDS 193245 193805 . - 0 ID=cds-RUP95194.1;Parent=gene-D8M19_02770;Dbxref=NCBI_GP:RUP95194.1;Name=RUP95194.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119727.1;locus_tag=D8M19_02770;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=RUP95194.1;transl_table=11 RBLY01000002.1 Genbank gene 193842 194858 . - . ID=gene-D8M19_02775;Name=D8M19_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02775 RBLY01000002.1 Protein Homology CDS 193842 194858 . - 0 ID=cds-RUP95195.1;Parent=gene-D8M19_02775;Dbxref=NCBI_GP:RUP95195.1;Name=RUP95195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119728.1;locus_tag=D8M19_02775;product=TerC family protein;protein_id=RUP95195.1;transl_table=11 RBLY01000002.1 Genbank gene 195080 198607 . - . ID=gene-D8M19_02780;Name=D8M19_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02780 RBLY01000002.1 Protein Homology CDS 195080 198607 . - 0 ID=cds-RUP95196.1;Parent=gene-D8M19_02780;Dbxref=NCBI_GP:RUP95196.1;Name=RUP95196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119729.1;locus_tag=D8M19_02780;product=DNA translocase FtsK;protein_id=RUP95196.1;transl_table=11 RBLY01000002.1 Genbank gene 198693 199319 . - . ID=gene-D8M19_02785;Name=D8M19_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02785 RBLY01000002.1 Protein Homology CDS 198693 199319 . - 0 ID=cds-RUP95197.1;Parent=gene-D8M19_02785;Dbxref=NCBI_GP:RUP95197.1;Name=RUP95197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119730.1;locus_tag=D8M19_02785;product=TIGR03085 family protein;protein_id=RUP95197.1;transl_table=11 RBLY01000002.1 Genbank gene 199368 201632 . - . ID=gene-D8M19_02790;Name=D8M19_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02790 RBLY01000002.1 Protein Homology CDS 199368 201632 . - 0 ID=cds-RUP95198.1;Parent=gene-D8M19_02790;Dbxref=NCBI_GP:RUP95198.1;Name=RUP95198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119731.1;locus_tag=D8M19_02790;product=RNase J family beta-CASP ribonuclease;protein_id=RUP95198.1;transl_table=11 RBLY01000002.1 Genbank gene 201633 202541 . - . ID=gene-D8M19_02795;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=D8M19_02795 RBLY01000002.1 Protein Homology CDS 201633 202541 . - 0 ID=cds-RUP95199.1;Parent=gene-D8M19_02795;Dbxref=NCBI_GP:RUP95199.1;Name=RUP95199.1;gbkey=CDS;gene=dapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845451.1;locus_tag=D8M19_02795;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=RUP95199.1;transl_table=11 RBLY01000002.1 Genbank gene 202659 203414 . - . ID=gene-D8M19_02800;Name=D8M19_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02800 RBLY01000002.1 Protein Homology CDS 202659 203414 . - 0 ID=cds-RUP95200.1;Parent=gene-D8M19_02800;Dbxref=NCBI_GP:RUP95200.1;Name=RUP95200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821751.1;locus_tag=D8M19_02800;product=FAD-dependent thymidylate synthase;protein_id=RUP95200.1;transl_table=11 RBLY01000002.1 Genbank gene 203418 204167 . - . ID=gene-D8M19_02805;Name=D8M19_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02805 RBLY01000002.1 Protein Homology CDS 203418 204167 . - 0 ID=cds-RUP95201.1;Parent=gene-D8M19_02805;Dbxref=NCBI_GP:RUP95201.1;Name=RUP95201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014525922.1;locus_tag=D8M19_02805;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=RUP95201.1;transl_table=11 RBLY01000002.1 Genbank gene 204313 205008 . + . ID=gene-D8M19_02810;Name=D8M19_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02810 RBLY01000002.1 GeneMarkS+ CDS 204313 205008 . + 0 ID=cds-RUP95202.1;Parent=gene-D8M19_02810;Dbxref=NCBI_GP:RUP95202.1;Name=RUP95202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02810;product=hypothetical protein;protein_id=RUP95202.1;transl_table=11 RBLY01000002.1 Genbank gene 205148 207454 . - . ID=gene-D8M19_02815;Name=D8M19_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02815 RBLY01000002.1 Protein Homology CDS 205148 207454 . - 0 ID=cds-RUP95203.1;Parent=gene-D8M19_02815;Dbxref=NCBI_GP:RUP95203.1;Name=RUP95203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119736.1;locus_tag=D8M19_02815;product=polyribonucleotide nucleotidyltransferase;protein_id=RUP95203.1;transl_table=11 RBLY01000002.1 Genbank gene 207684 207953 . - . ID=gene-D8M19_02820;Name=D8M19_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02820 RBLY01000002.1 Protein Homology CDS 207684 207953 . - 0 ID=cds-RUP95204.1;Parent=gene-D8M19_02820;Dbxref=NCBI_GP:RUP95204.1;Name=RUP95204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528980.1;locus_tag=D8M19_02820;product=30S ribosomal protein S15;protein_id=RUP95204.1;transl_table=11 RBLY01000002.1 Genbank gene 208109 209164 . - . ID=gene-D8M19_02825;Name=D8M19_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02825 RBLY01000002.1 Protein Homology CDS 208109 209164 . - 0 ID=cds-RUP95205.1;Parent=gene-D8M19_02825;Dbxref=NCBI_GP:RUP95205.1;Name=RUP95205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119738.1;locus_tag=D8M19_02825;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=RUP95205.1;transl_table=11 RBLY01000002.1 Genbank gene 209213 210196 . + . ID=gene-D8M19_02830;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=D8M19_02830 RBLY01000002.1 Protein Homology CDS 209213 210196 . + 0 ID=cds-RUP95206.1;Parent=gene-D8M19_02830;Dbxref=NCBI_GP:RUP95206.1;Name=RUP95206.1;gbkey=CDS;gene=truB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190323.1;locus_tag=D8M19_02830;product=tRNA pseudouridine(55) synthase TruB;protein_id=RUP95206.1;transl_table=11 RBLY01000002.1 Genbank gene 210239 210916 . - . ID=gene-D8M19_02835;Name=D8M19_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02835 RBLY01000002.1 Protein Homology CDS 210239 210916 . - 0 ID=cds-RUP95207.1;Parent=gene-D8M19_02835;Dbxref=NCBI_GP:RUP95207.1;Name=RUP95207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119740.1;locus_tag=D8M19_02835;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=RUP95207.1;transl_table=11 RBLY01000002.1 Genbank gene 210913 211830 . - . ID=gene-D8M19_02840;Name=D8M19_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02840 RBLY01000002.1 Protein Homology CDS 210913 211830 . - 0 ID=cds-RUP95208.1;Parent=gene-D8M19_02840;Dbxref=NCBI_GP:RUP95208.1;Name=RUP95208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325166.1;locus_tag=D8M19_02840;product=metallophosphoesterase;protein_id=RUP95208.1;transl_table=11 RBLY01000002.1 Genbank gene 211827 213179 . - . ID=gene-D8M19_02845;Name=D8M19_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02845 RBLY01000002.1 Protein Homology CDS 211827 213179 . - 0 ID=cds-RUP95209.1;Parent=gene-D8M19_02845;Dbxref=NCBI_GP:RUP95209.1;Name=RUP95209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021013.1;locus_tag=D8M19_02845;product=MATE family efflux transporter;protein_id=RUP95209.1;transl_table=11 RBLY01000002.1 Genbank gene 213176 214141 . - . ID=gene-D8M19_02850;Name=D8M19_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02850 RBLY01000002.1 Protein Homology CDS 213176 214141 . - 0 ID=cds-RUP95210.1;Parent=gene-D8M19_02850;Dbxref=NCBI_GP:RUP95210.1;Name=RUP95210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119743.1;locus_tag=D8M19_02850;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=RUP95210.1;transl_table=11 RBLY01000002.1 Genbank gene 214167 214598 . - . ID=gene-D8M19_02855;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=D8M19_02855 RBLY01000002.1 Protein Homology CDS 214167 214598 . - 0 ID=cds-RUP95211.1;Parent=gene-D8M19_02855;Dbxref=NCBI_GP:RUP95211.1;Name=RUP95211.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190331.1;locus_tag=D8M19_02855;product=30S ribosome-binding factor RbfA;protein_id=RUP95211.1;transl_table=11 RBLY01000002.1 Genbank gene 214770 217664 . - . ID=gene-D8M19_02860;Name=D8M19_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02860 RBLY01000002.1 Protein Homology CDS 214770 217664 . - 0 ID=cds-RUP95212.1;Parent=gene-D8M19_02860;Dbxref=NCBI_GP:RUP95212.1;Name=RUP95212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190332.1;locus_tag=D8M19_02860;product=translation initiation factor IF-2;protein_id=RUP95212.1;transl_table=11 RBLY01000002.1 Genbank gene 217766 218062 . - . ID=gene-D8M19_02865;Name=D8M19_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02865 RBLY01000002.1 Protein Homology CDS 217766 218062 . - 0 ID=cds-RUP95336.1;Parent=gene-D8M19_02865;Dbxref=NCBI_GP:RUP95336.1;Name=RUP95336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821736.1;locus_tag=D8M19_02865;product=YlxR family protein;protein_id=RUP95336.1;transl_table=11 RBLY01000002.1 Genbank pseudogene 218379 219425 . - . ID=gene-D8M19_02870;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=D8M19_02870;pseudo=true RBLY01000002.1 Protein Homology CDS 218379 219425 . - 0 ID=cds-D8M19_02870;Parent=gene-D8M19_02870;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278763.1;locus_tag=D8M19_02870;product=transcription termination/antitermination protein NusA;pseudo=true;transl_table=11 RBLY01000002.1 Genbank gene 219437 220126 . - . ID=gene-D8M19_02875;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=D8M19_02875 RBLY01000002.1 Protein Homology CDS 219437 220126 . - 0 ID=cds-RUP95213.1;Parent=gene-D8M19_02875;Dbxref=NCBI_GP:RUP95213.1;Name=RUP95213.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283562.1;locus_tag=D8M19_02875;product=ribosome maturation factor RimP;protein_id=RUP95213.1;transl_table=11 RBLY01000002.1 Genbank gene 220125 221033 . + . ID=gene-D8M19_02880;Name=D8M19_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02880 RBLY01000002.1 GeneMarkS+ CDS 220125 221033 . + 0 ID=cds-RUP95214.1;Parent=gene-D8M19_02880;Dbxref=NCBI_GP:RUP95214.1;Name=RUP95214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_02880;product=hypothetical protein;protein_id=RUP95214.1;transl_table=11 RBLY01000002.1 Genbank gene 221043 221933 . + . ID=gene-D8M19_02885;Name=D8M19_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02885 RBLY01000002.1 Protein Homology CDS 221043 221933 . + 0 ID=cds-RUP95215.1;Parent=gene-D8M19_02885;Dbxref=NCBI_GP:RUP95215.1;Name=RUP95215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328694.1;locus_tag=D8M19_02885;product=PhzF family phenazine biosynthesis protein;protein_id=RUP95215.1;transl_table=11 RBLY01000002.1 Genbank gene 222004 223842 . - . ID=gene-D8M19_02890;Name=D8M19_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02890 RBLY01000002.1 Protein Homology CDS 222004 223842 . - 0 ID=cds-RUP95216.1;Parent=gene-D8M19_02890;Dbxref=NCBI_GP:RUP95216.1;Name=RUP95216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119750.1;locus_tag=D8M19_02890;product=proline--tRNA ligase;protein_id=RUP95216.1;transl_table=11 RBLY01000002.1 Genbank gene 223886 224659 . + . ID=gene-D8M19_02895;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=D8M19_02895 RBLY01000002.1 Protein Homology CDS 223886 224659 . + 0 ID=cds-RUP95217.1;Parent=gene-D8M19_02895;Dbxref=NCBI_GP:RUP95217.1;Name=RUP95217.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119751.1;locus_tag=D8M19_02895;product=peroxide stress protein YaaA;protein_id=RUP95217.1;transl_table=11 RBLY01000002.1 Genbank gene 224855 225787 . + . ID=gene-D8M19_02900;Name=D8M19_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02900 RBLY01000002.1 Protein Homology CDS 224855 225787 . + 0 ID=cds-RUP95218.1;Parent=gene-D8M19_02900;Dbxref=NCBI_GP:RUP95218.1;Name=RUP95218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02423.13;locus_tag=D8M19_02900;product=ornithine cyclodeaminase family protein;protein_id=RUP95218.1;transl_table=11 RBLY01000002.1 Genbank gene 225791 227257 . + . ID=gene-D8M19_02905;Name=D8M19_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02905 RBLY01000002.1 Protein Homology CDS 225791 227257 . + 0 ID=cds-RUP95219.1;Parent=gene-D8M19_02905;Dbxref=NCBI_GP:RUP95219.1;Name=RUP95219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119753.1;locus_tag=D8M19_02905;product=YdiU family protein;protein_id=RUP95219.1;transl_table=11 RBLY01000002.1 Genbank gene 227390 228886 . - . ID=gene-D8M19_02910;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=D8M19_02910 RBLY01000002.1 Protein Homology CDS 227390 228886 . - 0 ID=cds-RUP95220.1;Parent=gene-D8M19_02910;Dbxref=NCBI_GP:RUP95220.1;Name=RUP95220.1;gbkey=CDS;gene=mqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119754.1;locus_tag=D8M19_02910;product=malate dehydrogenase (quinone);protein_id=RUP95220.1;transl_table=11 RBLY01000002.1 Genbank gene 229153 230217 . + . ID=gene-D8M19_02915;Name=D8M19_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02915 RBLY01000002.1 Protein Homology CDS 229153 230217 . + 0 ID=cds-RUP95221.1;Parent=gene-D8M19_02915;Dbxref=NCBI_GP:RUP95221.1;Name=RUP95221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12146.6;locus_tag=D8M19_02915;product=alpha/beta hydrolase;protein_id=RUP95221.1;transl_table=11 RBLY01000002.1 Genbank gene 230235 231662 . + . ID=gene-D8M19_02920;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=D8M19_02920 RBLY01000002.1 Protein Homology CDS 230235 231662 . + 0 ID=cds-RUP95337.1;Parent=gene-D8M19_02920;Dbxref=NCBI_GP:RUP95337.1;Name=RUP95337.1;gbkey=CDS;gene=mtr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278725.1;locus_tag=D8M19_02920;product=mycothione reductase;protein_id=RUP95337.1;transl_table=11 RBLY01000002.1 Genbank gene 231761 232627 . - . ID=gene-D8M19_02925;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=D8M19_02925 RBLY01000002.1 Protein Homology CDS 231761 232627 . - 0 ID=cds-RUP95222.1;Parent=gene-D8M19_02925;Dbxref=NCBI_GP:RUP95222.1;Name=RUP95222.1;gbkey=CDS;gene=map;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119757.1;locus_tag=D8M19_02925;product=type I methionyl aminopeptidase;protein_id=RUP95222.1;transl_table=11 RBLY01000002.1 Genbank gene 232873 234726 . - . ID=gene-D8M19_02930;Name=D8M19_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02930 RBLY01000002.1 Protein Homology CDS 232873 234726 . - 0 ID=cds-RUP95223.1;Parent=gene-D8M19_02930;Dbxref=NCBI_GP:RUP95223.1;Name=RUP95223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119760.1;locus_tag=D8M19_02930;product=penicillin-binding transpeptidase domain-containing protein;protein_id=RUP95223.1;transl_table=11 RBLY01000002.1 Genbank gene 234759 235922 . - . ID=gene-D8M19_02935;Name=D8M19_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02935 RBLY01000002.1 Protein Homology CDS 234759 235922 . - 0 ID=cds-RUP95224.1;Parent=gene-D8M19_02935;Dbxref=NCBI_GP:RUP95224.1;Name=RUP95224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119761.1;locus_tag=D8M19_02935;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=RUP95224.1;transl_table=11 RBLY01000002.1 Genbank gene 235990 237210 . - . ID=gene-D8M19_02940;Name=D8M19_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02940 RBLY01000002.1 Protein Homology CDS 235990 237210 . - 0 ID=cds-RUP95225.1;Parent=gene-D8M19_02940;Dbxref=NCBI_GP:RUP95225.1;Name=RUP95225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278712.1;locus_tag=D8M19_02940;product=RIP metalloprotease;protein_id=RUP95225.1;transl_table=11 RBLY01000002.1 Genbank gene 237279 238514 . - . ID=gene-D8M19_02945;Name=D8M19_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02945 RBLY01000002.1 Protein Homology CDS 237279 238514 . - 0 ID=cds-RUP95226.1;Parent=gene-D8M19_02945;Dbxref=NCBI_GP:RUP95226.1;Name=RUP95226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190370.1;locus_tag=D8M19_02945;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=RUP95226.1;transl_table=11 RBLY01000002.1 Genbank gene 238662 239099 . + . ID=gene-D8M19_02950;Name=D8M19_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02950 RBLY01000002.1 Protein Homology CDS 238662 239099 . + 0 ID=cds-RUP95227.1;Parent=gene-D8M19_02950;Dbxref=NCBI_GP:RUP95227.1;Name=RUP95227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119764.1;locus_tag=D8M19_02950;product=DUF2631 domain-containing protein;protein_id=RUP95227.1;transl_table=11 RBLY01000002.1 Genbank gene 239261 240388 . - . ID=gene-D8M19_02955;Name=D8M19_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02955 RBLY01000002.1 Protein Homology CDS 239261 240388 . - 0 ID=cds-RUP95338.1;Parent=gene-D8M19_02955;Dbxref=NCBI_GP:RUP95338.1;Name=RUP95338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011075666.1;locus_tag=D8M19_02955;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=RUP95338.1;transl_table=11 RBLY01000002.1 Genbank gene 240429 241322 . - . ID=gene-D8M19_02960;Name=D8M19_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02960 RBLY01000002.1 Protein Homology CDS 240429 241322 . - 0 ID=cds-RUP95228.1;Parent=gene-D8M19_02960;Dbxref=NCBI_GP:RUP95228.1;Name=RUP95228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119766.1;locus_tag=D8M19_02960;product=phosphatidate cytidylyltransferase;protein_id=RUP95228.1;transl_table=11 RBLY01000002.1 Genbank gene 241499 242056 . - . ID=gene-D8M19_02965;Name=D8M19_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02965 RBLY01000002.1 Protein Homology CDS 241499 242056 . - 0 ID=cds-RUP95229.1;Parent=gene-D8M19_02965;Dbxref=NCBI_GP:RUP95229.1;Name=RUP95229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845378.1;locus_tag=D8M19_02965;product=ribosome recycling factor;protein_id=RUP95229.1;transl_table=11 RBLY01000002.1 Genbank gene 242128 242868 . - . ID=gene-D8M19_02970;Name=D8M19_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02970 RBLY01000002.1 Protein Homology CDS 242128 242868 . - 0 ID=cds-RUP95230.1;Parent=gene-D8M19_02970;Dbxref=NCBI_GP:RUP95230.1;Name=RUP95230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119768.1;locus_tag=D8M19_02970;product=UMP kinase;protein_id=RUP95230.1;transl_table=11 RBLY01000002.1 Genbank gene 243067 243894 . - . ID=gene-D8M19_02975;Name=D8M19_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02975 RBLY01000002.1 Protein Homology CDS 243067 243894 . - 0 ID=cds-RUP95231.1;Parent=gene-D8M19_02975;Dbxref=NCBI_GP:RUP95231.1;Name=RUP95231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119769.1;locus_tag=D8M19_02975;product=elongation factor Ts;protein_id=RUP95231.1;transl_table=11 RBLY01000002.1 Genbank gene 243970 244788 . - . ID=gene-D8M19_02980;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=D8M19_02980 RBLY01000002.1 Protein Homology CDS 243970 244788 . - 0 ID=cds-RUP95232.1;Parent=gene-D8M19_02980;Dbxref=NCBI_GP:RUP95232.1;Name=RUP95232.1;gbkey=CDS;gene=rpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119770.1;locus_tag=D8M19_02980;product=30S ribosomal protein S2;protein_id=RUP95232.1;transl_table=11 RBLY01000002.1 Genbank gene 245303 245821 . + . ID=gene-D8M19_02985;Name=D8M19_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02985 RBLY01000002.1 Protein Homology CDS 245303 245821 . + 0 ID=cds-RUP95339.1;Parent=gene-D8M19_02985;Dbxref=NCBI_GP:RUP95339.1;Name=RUP95339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600018.1;locus_tag=D8M19_02985;product=M23 family metallopeptidase;protein_id=RUP95339.1;transl_table=11 RBLY01000002.1 Genbank gene 245851 246804 . - . ID=gene-D8M19_02990;Name=D8M19_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_02990 RBLY01000002.1 Protein Homology CDS 245851 246804 . - 0 ID=cds-RUP95233.1;Parent=gene-D8M19_02990;Dbxref=NCBI_GP:RUP95233.1;Name=RUP95233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119772.1;locus_tag=D8M19_02990;product=tyrosine recombinase XerC;protein_id=RUP95233.1;transl_table=11 RBLY01000002.1 Genbank gene 246883 248094 . - . ID=gene-D8M19_02995;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=D8M19_02995 RBLY01000002.1 Protein Homology CDS 246883 248094 . - 0 ID=cds-RUP95234.1;Parent=gene-D8M19_02995;Dbxref=NCBI_GP:RUP95234.1;Name=RUP95234.1;gbkey=CDS;gene=dprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601234.1;locus_tag=D8M19_02995;product=DNA-protecting protein DprA;protein_id=RUP95234.1;transl_table=11 RBLY01000002.1 Genbank gene 248091 249641 . - . ID=gene-D8M19_03000;Name=D8M19_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03000 RBLY01000002.1 Protein Homology CDS 248091 249641 . - 0 ID=cds-RUP95235.1;Parent=gene-D8M19_03000;Dbxref=NCBI_GP:RUP95235.1;Name=RUP95235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401197.1;locus_tag=D8M19_03000;product=ATP-binding protein;protein_id=RUP95235.1;transl_table=11 RBLY01000002.1 Genbank gene 249628 250029 . - . ID=gene-D8M19_03005;Name=D8M19_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03005 RBLY01000002.1 Protein Homology CDS 249628 250029 . - 0 ID=cds-RUP95236.1;Parent=gene-D8M19_03005;Dbxref=NCBI_GP:RUP95236.1;Name=RUP95236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580524.1;locus_tag=D8M19_03005;product=YraN family protein;protein_id=RUP95236.1;transl_table=11 RBLY01000002.1 Genbank gene 250249 250557 . - . ID=gene-D8M19_03010;Name=D8M19_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03010 RBLY01000002.1 Protein Homology CDS 250249 250557 . - 0 ID=cds-RUP95237.1;Parent=gene-D8M19_03010;Dbxref=NCBI_GP:RUP95237.1;Name=RUP95237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601237.1;locus_tag=D8M19_03010;product=DUF2469 family protein;protein_id=RUP95237.1;transl_table=11 RBLY01000002.1 Genbank gene 250681 251298 . - . ID=gene-D8M19_03015;Name=D8M19_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03015 RBLY01000002.1 Protein Homology CDS 250681 251298 . - 0 ID=cds-RUP95340.1;Parent=gene-D8M19_03015;Dbxref=NCBI_GP:RUP95340.1;Name=RUP95340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119777.1;locus_tag=D8M19_03015;product=ribonuclease HII;protein_id=RUP95340.1;transl_table=11 RBLY01000002.1 Genbank gene 251378 252118 . - . ID=gene-D8M19_03020;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D8M19_03020 RBLY01000002.1 Protein Homology CDS 251378 252118 . - 0 ID=cds-RUP95238.1;Parent=gene-D8M19_03020;Dbxref=NCBI_GP:RUP95238.1;Name=RUP95238.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119778.1;locus_tag=D8M19_03020;product=signal peptidase I;protein_id=RUP95238.1;transl_table=11 RBLY01000002.1 Genbank gene 252096 252788 . - . ID=gene-D8M19_03025;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=D8M19_03025 RBLY01000002.1 Protein Homology CDS 252096 252788 . - 0 ID=cds-RUP95341.1;Parent=gene-D8M19_03025;Dbxref=NCBI_GP:RUP95341.1;Name=RUP95341.1;gbkey=CDS;gene=lepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020970.1;locus_tag=D8M19_03025;product=signal peptidase I;protein_id=RUP95341.1;transl_table=11 RBLY01000002.1 Genbank gene 253149 253493 . - . ID=gene-D8M19_03030;Name=D8M19_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03030 RBLY01000002.1 Protein Homology CDS 253149 253493 . - 0 ID=cds-RUP95239.1;Parent=gene-D8M19_03030;Dbxref=NCBI_GP:RUP95239.1;Name=RUP95239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601241.1;locus_tag=D8M19_03030;product=50S ribosomal protein L19;protein_id=RUP95239.1;transl_table=11 RBLY01000002.1 Genbank gene 253671 255518 . + . ID=gene-D8M19_03035;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=D8M19_03035 RBLY01000002.1 Protein Homology CDS 253671 255518 . + 0 ID=cds-RUP95240.1;Parent=gene-D8M19_03035;Dbxref=NCBI_GP:RUP95240.1;Name=RUP95240.1;gbkey=CDS;gene=thiO;inference=COORDINATES: protein motif:HMM:PRK00043.3-4;locus_tag=D8M19_03035;product=glycine oxidase ThiO;protein_id=RUP95240.1;transl_table=11 RBLY01000002.1 Genbank gene 255602 255835 . + . ID=gene-D8M19_03040;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=D8M19_03040 RBLY01000002.1 Protein Homology CDS 255602 255835 . + 0 ID=cds-RUP95241.1;Parent=gene-D8M19_03040;Dbxref=NCBI_GP:RUP95241.1;Name=RUP95241.1;gbkey=CDS;gene=thiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119782.1;locus_tag=D8M19_03040;product=sulfur carrier protein ThiS;protein_id=RUP95241.1;transl_table=11 RBLY01000002.1 Genbank gene 255843 256625 . + . ID=gene-D8M19_03045;Name=D8M19_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03045 RBLY01000002.1 Protein Homology CDS 255843 256625 . + 0 ID=cds-RUP95242.1;Parent=gene-D8M19_03045;Dbxref=NCBI_GP:RUP95242.1;Name=RUP95242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767935.1;locus_tag=D8M19_03045;product=thiazole synthase;protein_id=RUP95242.1;transl_table=11 RBLY01000002.1 Genbank gene 256635 257867 . + . ID=gene-D8M19_03050;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=D8M19_03050 RBLY01000002.1 Protein Homology CDS 256635 257867 . + 0 ID=cds-RUP95243.1;Parent=gene-D8M19_03050;Dbxref=NCBI_GP:RUP95243.1;Name=RUP95243.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119784.1;locus_tag=D8M19_03050;product=thiamine biosynthesis protein ThiF;protein_id=RUP95243.1;transl_table=11 RBLY01000002.1 Genbank gene 258261 260606 . - . ID=gene-D8M19_03055;Name=D8M19_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03055 RBLY01000002.1 Protein Homology CDS 258261 260606 . - 0 ID=cds-RUP95244.1;Parent=gene-D8M19_03055;Dbxref=NCBI_GP:RUP95244.1;Name=RUP95244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119787.1;locus_tag=D8M19_03055;product=RNA-binding transcriptional accessory protein;protein_id=RUP95244.1;transl_table=11 RBLY01000002.1 Genbank gene 260697 261581 . - . ID=gene-D8M19_03060;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=D8M19_03060 RBLY01000002.1 Protein Homology CDS 260697 261581 . - 0 ID=cds-RUP95245.1;Parent=gene-D8M19_03060;Dbxref=NCBI_GP:RUP95245.1;Name=RUP95245.1;gbkey=CDS;gene=trmD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278641.1;locus_tag=D8M19_03060;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=RUP95245.1;transl_table=11 RBLY01000002.1 Genbank gene 261578 262078 . - . ID=gene-D8M19_03065;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=D8M19_03065 RBLY01000002.1 Protein Homology CDS 261578 262078 . - 0 ID=cds-RUP95246.1;Parent=gene-D8M19_03065;Dbxref=NCBI_GP:RUP95246.1;Name=RUP95246.1;gbkey=CDS;gene=rimM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190425.1;locus_tag=D8M19_03065;product=ribosome maturation factor RimM;protein_id=RUP95246.1;transl_table=11 RBLY01000002.1 Genbank gene 262188 262670 . - . ID=gene-D8M19_03070;Name=D8M19_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03070 RBLY01000002.1 Protein Homology CDS 262188 262670 . - 0 ID=cds-RUP95247.1;Parent=gene-D8M19_03070;Dbxref=NCBI_GP:RUP95247.1;Name=RUP95247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767956.1;locus_tag=D8M19_03070;product=30S ribosomal protein S16;protein_id=RUP95247.1;transl_table=11 RBLY01000002.1 Genbank gene 263082 265172 . + . ID=gene-D8M19_03075;Name=D8M19_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03075 RBLY01000002.1 Protein Homology CDS 263082 265172 . + 0 ID=cds-RUP95248.1;Parent=gene-D8M19_03075;Dbxref=NCBI_GP:RUP95248.1;Name=RUP95248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119791.1;locus_tag=D8M19_03075;product=acyltransferase;protein_id=RUP95248.1;transl_table=11 RBLY01000002.1 Genbank gene 265174 266748 . - . ID=gene-D8M19_03080;Name=D8M19_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03080 RBLY01000002.1 Protein Homology CDS 265174 266748 . - 0 ID=cds-RUP95249.1;Parent=gene-D8M19_03080;Dbxref=NCBI_GP:RUP95249.1;Name=RUP95249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119792.1;locus_tag=D8M19_03080;product=signal recognition particle protein;protein_id=RUP95249.1;transl_table=11 RBLY01000002.1 Genbank gene 267055 267438 . - . ID=gene-D8M19_03085;Name=D8M19_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03085 RBLY01000002.1 Protein Homology CDS 267055 267438 . - 0 ID=cds-RUP95342.1;Parent=gene-D8M19_03085;Dbxref=NCBI_GP:RUP95342.1;Name=RUP95342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119795.1;locus_tag=D8M19_03085;product=sodium:proton antiporter;protein_id=RUP95342.1;transl_table=11 RBLY01000002.1 Genbank gene 267447 267707 . - . ID=gene-D8M19_03090;Name=D8M19_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03090 RBLY01000002.1 Protein Homology CDS 267447 267707 . - 0 ID=cds-RUP95250.1;Parent=gene-D8M19_03090;Dbxref=NCBI_GP:RUP95250.1;Name=RUP95250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119796.1;locus_tag=D8M19_03090;product=pesticidal protein Cry26Aa;protein_id=RUP95250.1;transl_table=11 RBLY01000002.1 Genbank gene 267707 268078 . - . ID=gene-D8M19_03095;Name=D8M19_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03095 RBLY01000002.1 Protein Homology CDS 267707 268078 . - 0 ID=cds-RUP95251.1;Parent=gene-D8M19_03095;Dbxref=NCBI_GP:RUP95251.1;Name=RUP95251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119797.1;locus_tag=D8M19_03095;product=sodium:proton antiporter;protein_id=RUP95251.1;transl_table=11 RBLY01000002.1 Genbank gene 268078 269670 . - . ID=gene-D8M19_03100;Name=D8M19_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03100 RBLY01000002.1 Protein Homology CDS 268078 269670 . - 0 ID=cds-RUP95252.1;Parent=gene-D8M19_03100;Dbxref=NCBI_GP:RUP95252.1;Name=RUP95252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119798.1;locus_tag=D8M19_03100;product=monovalent cation/H+ antiporter subunit D family protein;protein_id=RUP95252.1;transl_table=11 RBLY01000002.1 Genbank gene 269670 270017 . - . ID=gene-D8M19_03105;Name=D8M19_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03105 RBLY01000002.1 Protein Homology CDS 269670 270017 . - 0 ID=cds-RUP95253.1;Parent=gene-D8M19_03105;Dbxref=NCBI_GP:RUP95253.1;Name=RUP95253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845332.1;locus_tag=D8M19_03105;product=Na+/H+ antiporter subunit C;protein_id=RUP95253.1;transl_table=11 RBLY01000002.1 Genbank gene 270021 272837 . - . ID=gene-D8M19_03110;Name=D8M19_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03110 RBLY01000002.1 Protein Homology CDS 270021 272837 . - 0 ID=cds-RUP95254.1;Parent=gene-D8M19_03110;Dbxref=NCBI_GP:RUP95254.1;Name=RUP95254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119800.1;locus_tag=D8M19_03110;product=DUF4040 family protein;protein_id=RUP95254.1;transl_table=11 RBLY01000002.1 Genbank gene 272862 274391 . - . ID=gene-D8M19_03115;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=D8M19_03115 RBLY01000002.1 Protein Homology CDS 272862 274391 . - 0 ID=cds-RUP95255.1;Parent=gene-D8M19_03115;Dbxref=NCBI_GP:RUP95255.1;Name=RUP95255.1;gbkey=CDS;gene=ftsY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119801.1;locus_tag=D8M19_03115;product=signal recognition particle-docking protein FtsY;protein_id=RUP95255.1;transl_table=11 RBLY01000002.1 Genbank gene 274479 275330 . - . ID=gene-D8M19_03120;Name=D8M19_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03120 RBLY01000002.1 Protein Homology CDS 274479 275330 . - 0 ID=cds-RUP95343.1;Parent=gene-D8M19_03120;Dbxref=NCBI_GP:RUP95343.1;Name=RUP95343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119803.1;locus_tag=D8M19_03120;product=glycine betaine ABC transporter substrate-binding protein;protein_id=RUP95343.1;transl_table=11 RBLY01000002.1 Genbank gene 275481 278948 . - . ID=gene-D8M19_03125;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=D8M19_03125 RBLY01000002.1 Protein Homology CDS 275481 278948 . - 0 ID=cds-RUP95256.1;Parent=gene-D8M19_03125;Dbxref=NCBI_GP:RUP95256.1;Name=RUP95256.1;gbkey=CDS;gene=smc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119804.1;locus_tag=D8M19_03125;product=chromosome segregation protein SMC;protein_id=RUP95256.1;transl_table=11 RBLY01000002.1 Genbank gene 278988 280469 . - . ID=gene-D8M19_03130;Name=D8M19_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03130 RBLY01000002.1 Protein Homology CDS 278988 280469 . - 0 ID=cds-RUP95257.1;Parent=gene-D8M19_03130;Dbxref=NCBI_GP:RUP95257.1;Name=RUP95257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119805.1;locus_tag=D8M19_03130;product=alanine:cation symporter family protein;protein_id=RUP95257.1;transl_table=11 RBLY01000002.1 Genbank gene 280489 281397 . - . ID=gene-D8M19_03135;Name=D8M19_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03135 RBLY01000002.1 Protein Homology CDS 280489 281397 . - 0 ID=cds-RUP95258.1;Parent=gene-D8M19_03135;Dbxref=NCBI_GP:RUP95258.1;Name=RUP95258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600090.1;locus_tag=D8M19_03135;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=RUP95258.1;transl_table=11 RBLY01000002.1 Genbank gene 281403 282164 . - . ID=gene-D8M19_03140;Name=D8M19_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03140 RBLY01000002.1 Protein Homology CDS 281403 282164 . - 0 ID=cds-RUP95259.1;Parent=gene-D8M19_03140;Dbxref=NCBI_GP:RUP95259.1;Name=RUP95259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119807.1;locus_tag=D8M19_03140;product=ribonuclease III;protein_id=RUP95259.1;transl_table=11 RBLY01000002.1 Genbank gene 282157 282699 . - . ID=gene-D8M19_03145;Name=D8M19_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03145 RBLY01000002.1 Protein Homology CDS 282157 282699 . - 0 ID=cds-RUP95260.1;Parent=gene-D8M19_03145;Dbxref=NCBI_GP:RUP95260.1;Name=RUP95260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119808.1;locus_tag=D8M19_03145;product=DUF177 domain-containing protein;protein_id=RUP95260.1;transl_table=11 RBLY01000002.1 Genbank gene 282731 283453 . - . ID=gene-D8M19_03150;Name=D8M19_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03150 RBLY01000002.1 Protein Homology CDS 282731 283453 . - 0 ID=cds-RUP95261.1;Parent=gene-D8M19_03150;Dbxref=NCBI_GP:RUP95261.1;Name=RUP95261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119809.1;locus_tag=D8M19_03150;product=DivIVA domain-containing protein;protein_id=RUP95261.1;transl_table=11 RBLY01000002.1 Genbank gene 283547 284890 . - . ID=gene-D8M19_03155;Name=D8M19_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03155 RBLY01000002.1 Protein Homology CDS 283547 284890 . - 0 ID=cds-RUP95344.1;Parent=gene-D8M19_03155;Dbxref=NCBI_GP:RUP95344.1;Name=RUP95344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601279.1;locus_tag=D8M19_03155;product=NADP-specific glutamate dehydrogenase;protein_id=RUP95344.1;transl_table=11 RBLY01000002.1 Genbank gene 285157 286257 . + . ID=gene-D8M19_03160;Name=D8M19_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03160 RBLY01000002.1 Protein Homology CDS 285157 286257 . + 0 ID=cds-RUP95262.1;Parent=gene-D8M19_03160;Dbxref=NCBI_GP:RUP95262.1;Name=RUP95262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119811.1;locus_tag=D8M19_03160;product=glycerate kinase;protein_id=RUP95262.1;transl_table=11 RBLY01000002.1 Genbank gene 286283 286681 . - . ID=gene-D8M19_03165;Name=D8M19_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03165 RBLY01000002.1 Protein Homology CDS 286283 286681 . - 0 ID=cds-RUP95263.1;Parent=gene-D8M19_03165;Dbxref=NCBI_GP:RUP95263.1;Name=RUP95263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119812.1;locus_tag=D8M19_03165;product=hypothetical protein;protein_id=RUP95263.1;transl_table=11 RBLY01000002.1 Genbank gene 286909 288198 . - . ID=gene-D8M19_03170;Name=D8M19_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03170 RBLY01000002.1 Protein Homology CDS 286909 288198 . - 0 ID=cds-RUP95264.1;Parent=gene-D8M19_03170;Dbxref=NCBI_GP:RUP95264.1;Name=RUP95264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01468.15;locus_tag=D8M19_03170;product=hypothetical protein;protein_id=RUP95264.1;transl_table=11 RBLY01000002.1 Genbank gene 288548 291541 . - . ID=gene-D8M19_03175;Name=D8M19_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03175 RBLY01000002.1 Protein Homology CDS 288548 291541 . - 0 ID=cds-RUP95265.1;Parent=gene-D8M19_03175;Dbxref=NCBI_GP:RUP95265.1;Name=RUP95265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01468.15;locus_tag=D8M19_03175;product=hypothetical protein;protein_id=RUP95265.1;transl_table=11 RBLY01000002.1 Genbank gene 291913 293154 . + . ID=gene-D8M19_03180;Name=D8M19_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03180 RBLY01000002.1 Protein Homology CDS 291913 293154 . + 0 ID=cds-RUP95266.1;Parent=gene-D8M19_03180;Dbxref=NCBI_GP:RUP95266.1;Name=RUP95266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845310.1;locus_tag=D8M19_03180;product=amidohydrolase;protein_id=RUP95266.1;transl_table=11 RBLY01000002.1 Genbank gene 293195 294625 . - . ID=gene-D8M19_03185;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=D8M19_03185 RBLY01000002.1 Protein Homology CDS 293195 294625 . - 0 ID=cds-RUP95267.1;Parent=gene-D8M19_03185;Dbxref=NCBI_GP:RUP95267.1;Name=RUP95267.1;gbkey=CDS;gene=pyk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014800618.1;locus_tag=D8M19_03185;product=pyruvate kinase;protein_id=RUP95267.1;transl_table=11 RBLY01000002.1 Genbank gene 294656 295555 . - . ID=gene-D8M19_03190;Name=D8M19_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03190 RBLY01000002.1 Protein Homology CDS 294656 295555 . - 0 ID=cds-RUP95268.1;Parent=gene-D8M19_03190;Dbxref=NCBI_GP:RUP95268.1;Name=RUP95268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119817.1;locus_tag=D8M19_03190;product=prolipoprotein diacylglyceryl transferase;protein_id=RUP95268.1;transl_table=11 RBLY01000002.1 Genbank gene 295670 296548 . - . ID=gene-D8M19_03195;Name=D8M19_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03195 RBLY01000002.1 Protein Homology CDS 295670 296548 . - 0 ID=cds-RUP95269.1;Parent=gene-D8M19_03195;Dbxref=NCBI_GP:RUP95269.1;Name=RUP95269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190465.1;locus_tag=D8M19_03195;product=indole-3-glycerol-phosphate synthase TrpC;protein_id=RUP95269.1;transl_table=11 RBLY01000002.1 Genbank gene 296708 297379 . - . ID=gene-D8M19_03200;Name=D8M19_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03200 RBLY01000002.1 Protein Homology CDS 296708 297379 . - 0 ID=cds-RUP95270.1;Parent=gene-D8M19_03200;Dbxref=NCBI_GP:RUP95270.1;Name=RUP95270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119819.1;locus_tag=D8M19_03200;product=TIGR02234 family membrane protein;protein_id=RUP95270.1;transl_table=11 RBLY01000002.1 Genbank gene 297384 297749 . - . ID=gene-D8M19_03205;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=D8M19_03205 RBLY01000002.1 Protein Homology CDS 297384 297749 . - 0 ID=cds-RUP95271.1;Parent=gene-D8M19_03205;Dbxref=NCBI_GP:RUP95271.1;Name=RUP95271.1;gbkey=CDS;gene=hisI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401252.1;locus_tag=D8M19_03205;product=phosphoribosyl-AMP cyclohydrolase;protein_id=RUP95271.1;transl_table=11 RBLY01000002.1 Genbank gene 297746 298525 . - . ID=gene-D8M19_03210;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=D8M19_03210 RBLY01000002.1 Protein Homology CDS 297746 298525 . - 0 ID=cds-RUP95272.1;Parent=gene-D8M19_03210;Dbxref=NCBI_GP:RUP95272.1;Name=RUP95272.1;gbkey=CDS;gene=hisF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005526281.1;locus_tag=D8M19_03210;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=RUP95272.1;transl_table=11 RBLY01000002.1 Genbank gene 298617 299438 . - . ID=gene-D8M19_03215;Name=D8M19_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03215 RBLY01000002.1 Protein Homology CDS 298617 299438 . - 0 ID=cds-RUP95273.1;Parent=gene-D8M19_03215;Dbxref=NCBI_GP:RUP95273.1;Name=RUP95273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00459.23;locus_tag=D8M19_03215;product=inositol monophosphatase family protein;protein_id=RUP95273.1;transl_table=11 RBLY01000002.1 Genbank gene 299451 300212 . - . ID=gene-D8M19_03220;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=D8M19_03220 RBLY01000002.1 Protein Homology CDS 299451 300212 . - 0 ID=cds-RUP95274.1;Parent=gene-D8M19_03220;Dbxref=NCBI_GP:RUP95274.1;Name=RUP95274.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119823.1;locus_tag=D8M19_03220;product=bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA;protein_id=RUP95274.1;transl_table=11 RBLY01000002.1 Genbank gene 300254 300886 . - . ID=gene-D8M19_03225;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=D8M19_03225 RBLY01000002.1 Protein Homology CDS 300254 300886 . - 0 ID=cds-RUP95275.1;Parent=gene-D8M19_03225;Dbxref=NCBI_GP:RUP95275.1;Name=RUP95275.1;gbkey=CDS;gene=hisH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119824.1;locus_tag=D8M19_03225;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=RUP95275.1;transl_table=11 RBLY01000002.1 Genbank gene 300902 302284 . - . ID=gene-D8M19_03230;Name=D8M19_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03230 RBLY01000002.1 Protein Homology CDS 300902 302284 . - 0 ID=cds-RUP95276.1;Parent=gene-D8M19_03230;Dbxref=NCBI_GP:RUP95276.1;Name=RUP95276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119825.1;locus_tag=D8M19_03230;product=MFS transporter;protein_id=RUP95276.1;transl_table=11 RBLY01000002.1 Genbank gene 302508 303113 . - . ID=gene-D8M19_03235;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=D8M19_03235 RBLY01000002.1 Protein Homology CDS 302508 303113 . - 0 ID=cds-RUP95277.1;Parent=gene-D8M19_03235;Dbxref=NCBI_GP:RUP95277.1;Name=RUP95277.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119827.1;locus_tag=D8M19_03235;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=RUP95277.1;transl_table=11 RBLY01000002.1 Genbank gene 303110 304204 . - . ID=gene-D8M19_03240;Name=D8M19_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03240 RBLY01000002.1 Protein Homology CDS 303110 304204 . - 0 ID=cds-RUP95278.1;Parent=gene-D8M19_03240;Dbxref=NCBI_GP:RUP95278.1;Name=RUP95278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119828.1;locus_tag=D8M19_03240;product=histidinol-phosphate transaminase;protein_id=RUP95278.1;transl_table=11 RBLY01000002.1 Genbank gene 304208 305533 . - . ID=gene-D8M19_03245;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=D8M19_03245 RBLY01000002.1 Protein Homology CDS 304208 305533 . - 0 ID=cds-RUP95279.1;Parent=gene-D8M19_03245;Dbxref=NCBI_GP:RUP95279.1;Name=RUP95279.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278524.1;locus_tag=D8M19_03245;product=histidinol dehydrogenase;protein_id=RUP95279.1;transl_table=11 RBLY01000002.1 Genbank gene 305556 306092 . - . ID=gene-D8M19_03250;Name=D8M19_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03250 RBLY01000002.1 GeneMarkS+ CDS 305556 306092 . - 0 ID=cds-RUP95280.1;Parent=gene-D8M19_03250;Dbxref=NCBI_GP:RUP95280.1;Name=RUP95280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03250;product=hypothetical protein;protein_id=RUP95280.1;transl_table=11 RBLY01000002.1 Genbank gene 306096 306803 . - . ID=gene-D8M19_03255;Name=D8M19_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03255 RBLY01000002.1 GeneMarkS+ CDS 306096 306803 . - 0 ID=cds-RUP95281.1;Parent=gene-D8M19_03255;Dbxref=NCBI_GP:RUP95281.1;Name=RUP95281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03255;product=hypothetical protein;protein_id=RUP95281.1;transl_table=11 RBLY01000002.1 Genbank gene 306903 307703 . + . ID=gene-D8M19_03260;Name=D8M19_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03260 RBLY01000002.1 Protein Homology CDS 306903 307703 . + 0 ID=cds-RUP95282.1;Parent=gene-D8M19_03260;Dbxref=NCBI_GP:RUP95282.1;Name=RUP95282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00440.21;locus_tag=D8M19_03260;product=TetR family transcriptional regulator;protein_id=RUP95282.1;transl_table=11 RBLY01000002.1 Genbank gene 307750 309126 . + . ID=gene-D8M19_03265;Name=D8M19_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03265 RBLY01000002.1 GeneMarkS+ CDS 307750 309126 . + 0 ID=cds-RUP95283.1;Parent=gene-D8M19_03265;Dbxref=NCBI_GP:RUP95283.1;Name=RUP95283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03265;product=DNA polymerase III subunit epsilon;protein_id=RUP95283.1;transl_table=11 RBLY01000002.1 Genbank gene 309226 310983 . + . ID=gene-D8M19_03270;Name=D8M19_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03270 RBLY01000002.1 Protein Homology CDS 309226 310983 . + 0 ID=cds-RUP95284.1;Parent=gene-D8M19_03270;Dbxref=NCBI_GP:RUP95284.1;Name=RUP95284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119834.1;locus_tag=D8M19_03270;product=BCCT family transporter;protein_id=RUP95284.1;transl_table=11 RBLY01000002.1 Genbank gene 311020 311709 . - . ID=gene-D8M19_03275;Name=D8M19_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03275 RBLY01000002.1 Protein Homology CDS 311020 311709 . - 0 ID=cds-RUP95285.1;Parent=gene-D8M19_03275;Dbxref=NCBI_GP:RUP95285.1;Name=RUP95285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119839.1;locus_tag=D8M19_03275;product=S1 family peptidase;protein_id=RUP95285.1;transl_table=11 RBLY01000002.1 Genbank gene 311808 312641 . - . ID=gene-D8M19_03280;Name=D8M19_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03280 RBLY01000002.1 Protein Homology CDS 311808 312641 . - 0 ID=cds-RUP95286.1;Parent=gene-D8M19_03280;Dbxref=NCBI_GP:RUP95286.1;Name=RUP95286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310028.1;locus_tag=D8M19_03280;product=ABC transporter ATP-binding protein;protein_id=RUP95286.1;transl_table=11 RBLY01000002.1 Genbank gene 312647 314701 . - . ID=gene-D8M19_03285;Name=D8M19_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03285 RBLY01000002.1 Protein Homology CDS 312647 314701 . - 0 ID=cds-RUP95287.1;Parent=gene-D8M19_03285;Dbxref=NCBI_GP:RUP95287.1;Name=RUP95287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119841.1;locus_tag=D8M19_03285;product=ATP-binding cassette domain-containing protein;protein_id=RUP95287.1;transl_table=11 RBLY01000002.1 Genbank gene 314701 315666 . - . ID=gene-D8M19_03290;Name=D8M19_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03290 RBLY01000002.1 Protein Homology CDS 314701 315666 . - 0 ID=cds-RUP95288.1;Parent=gene-D8M19_03290;Dbxref=NCBI_GP:RUP95288.1;Name=RUP95288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003154280.1;locus_tag=D8M19_03290;product=ABC transporter permease;protein_id=RUP95288.1;transl_table=11 RBLY01000002.1 Genbank gene 315678 317321 . - . ID=gene-D8M19_03295;Name=D8M19_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03295 RBLY01000002.1 Protein Homology CDS 315678 317321 . - 0 ID=cds-RUP95289.1;Parent=gene-D8M19_03295;Dbxref=NCBI_GP:RUP95289.1;Name=RUP95289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119843.1;locus_tag=D8M19_03295;product=ABC transporter substrate-binding protein;protein_id=RUP95289.1;transl_table=11 RBLY01000002.1 Genbank gene 317680 318381 . + . ID=gene-D8M19_03300;Name=D8M19_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03300 RBLY01000002.1 Protein Homology CDS 317680 318381 . + 0 ID=cds-RUP95290.1;Parent=gene-D8M19_03300;Dbxref=NCBI_GP:RUP95290.1;Name=RUP95290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119844.1;locus_tag=D8M19_03300;product=FadR family transcriptional regulator;protein_id=RUP95290.1;transl_table=11 RBLY01000002.1 Genbank gene 318427 319158 . - . ID=gene-D8M19_03305;Name=D8M19_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03305 RBLY01000002.1 Protein Homology CDS 318427 319158 . - 0 ID=cds-RUP95291.1;Parent=gene-D8M19_03305;Dbxref=NCBI_GP:RUP95291.1;Name=RUP95291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732469.1;locus_tag=D8M19_03305;product=putative N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=RUP95291.1;transl_table=11 RBLY01000002.1 Genbank gene 319311 320327 . - . ID=gene-D8M19_03310;Name=D8M19_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03310 RBLY01000002.1 Protein Homology CDS 319311 320327 . - 0 ID=cds-RUP95292.1;Parent=gene-D8M19_03310;Dbxref=NCBI_GP:RUP95292.1;Name=RUP95292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00480.18;locus_tag=D8M19_03310;product=ROK family protein;protein_id=RUP95292.1;transl_table=11 RBLY01000002.1 Genbank gene 320309 321250 . - . ID=gene-D8M19_03315;Name=D8M19_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03315 RBLY01000002.1 Protein Homology CDS 320309 321250 . - 0 ID=cds-RUP95345.1;Parent=gene-D8M19_03315;Dbxref=NCBI_GP:RUP95345.1;Name=RUP95345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119847.1;locus_tag=D8M19_03315;product=dihydrodipicolinate synthase family protein;protein_id=RUP95345.1;transl_table=11 RBLY01000002.1 Genbank gene 321404 322588 . + . ID=gene-D8M19_03320;Name=D8M19_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03320 RBLY01000002.1 Protein Homology CDS 321404 322588 . + 0 ID=cds-RUP95293.1;Parent=gene-D8M19_03320;Dbxref=NCBI_GP:RUP95293.1;Name=RUP95293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119848.1;locus_tag=D8M19_03320;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=RUP95293.1;transl_table=11 RBLY01000002.1 Genbank gene 322628 323401 . + . ID=gene-D8M19_03325;Name=D8M19_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03325 RBLY01000002.1 Protein Homology CDS 322628 323401 . + 0 ID=cds-RUP95294.1;Parent=gene-D8M19_03325;Dbxref=NCBI_GP:RUP95294.1;Name=RUP95294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014319815.1;locus_tag=D8M19_03325;product=glucosamine-6-phosphate deaminase;protein_id=RUP95294.1;transl_table=11 RBLY01000002.1 Genbank gene 323456 326377 . + . ID=gene-D8M19_03330;Name=D8M19_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03330 RBLY01000002.1 Protein Homology CDS 323456 326377 . + 0 ID=cds-RUP95295.1;Parent=gene-D8M19_03330;Dbxref=NCBI_GP:RUP95295.1;Name=RUP95295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186578.1;locus_tag=D8M19_03330;product=FAD-binding oxidoreductase;protein_id=RUP95295.1;transl_table=11 RBLY01000002.1 Genbank gene 326530 327213 . + . ID=gene-D8M19_03335;Name=D8M19_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03335 RBLY01000002.1 GeneMarkS+ CDS 326530 327213 . + 0 ID=cds-RUP95296.1;Parent=gene-D8M19_03335;Dbxref=NCBI_GP:RUP95296.1;Name=RUP95296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03335;product=hypothetical protein;protein_id=RUP95296.1;transl_table=11 RBLY01000002.1 Genbank gene 327270 327668 . - . ID=gene-D8M19_03340;Name=D8M19_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03340 RBLY01000002.1 Protein Homology CDS 327270 327668 . - 0 ID=cds-RUP95297.1;Parent=gene-D8M19_03340;Dbxref=NCBI_GP:RUP95297.1;Name=RUP95297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119853.1;locus_tag=D8M19_03340;product=RNA-binding S4 domain-containing protein;protein_id=RUP95297.1;transl_table=11 RBLY01000002.1 Genbank gene 327677 327913 . - . ID=gene-D8M19_03345;Name=D8M19_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03345 RBLY01000002.1 Protein Homology CDS 327677 327913 . - 0 ID=cds-RUP95298.1;Parent=gene-D8M19_03345;Dbxref=NCBI_GP:RUP95298.1;Name=RUP95298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119854.1;locus_tag=D8M19_03345;product=hypothetical protein;protein_id=RUP95298.1;transl_table=11 RBLY01000002.1 Genbank gene 327920 328567 . - . ID=gene-D8M19_03350;Name=D8M19_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03350 RBLY01000002.1 Protein Homology CDS 327920 328567 . - 0 ID=cds-RUP95299.1;Parent=gene-D8M19_03350;Dbxref=NCBI_GP:RUP95299.1;Name=RUP95299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190496.1;locus_tag=D8M19_03350;product=YigZ family protein;protein_id=RUP95299.1;transl_table=11 RBLY01000002.1 Genbank gene 328581 329882 . - . ID=gene-D8M19_03355;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=D8M19_03355 RBLY01000002.1 Protein Homology CDS 328581 329882 . - 0 ID=cds-RUP95300.1;Parent=gene-D8M19_03355;Dbxref=NCBI_GP:RUP95300.1;Name=RUP95300.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190497.1;locus_tag=D8M19_03355;product=threonine dehydratase;protein_id=RUP95300.1;transl_table=11 RBLY01000002.1 Genbank gene 329968 333546 . - . ID=gene-D8M19_03360;Name=D8M19_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03360 RBLY01000002.1 Protein Homology CDS 329968 333546 . - 0 ID=cds-RUP95301.1;Parent=gene-D8M19_03360;Dbxref=NCBI_GP:RUP95301.1;Name=RUP95301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119857.1;locus_tag=D8M19_03360;product=DNA polymerase III subunit alpha;protein_id=RUP95301.1;transl_table=11 RBLY01000002.1 Genbank gene 333570 333761 . - . ID=gene-D8M19_03365;Name=D8M19_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03365 RBLY01000002.1 GeneMarkS+ CDS 333570 333761 . - 0 ID=cds-RUP95302.1;Parent=gene-D8M19_03365;Dbxref=NCBI_GP:RUP95302.1;Name=RUP95302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03365;product=hypothetical protein;protein_id=RUP95302.1;transl_table=11 RBLY01000002.1 Genbank gene 333772 334416 . - . ID=gene-D8M19_03370;Name=D8M19_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03370 RBLY01000002.1 GeneMarkS+ CDS 333772 334416 . - 0 ID=cds-RUP95303.1;Parent=gene-D8M19_03370;Dbxref=NCBI_GP:RUP95303.1;Name=RUP95303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03370;product=hypothetical protein;protein_id=RUP95303.1;transl_table=11 RBLY01000002.1 Genbank gene 334496 335431 . - . ID=gene-D8M19_03375;Name=D8M19_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03375 RBLY01000002.1 Protein Homology CDS 334496 335431 . - 0 ID=cds-RUP95304.1;Parent=gene-D8M19_03375;Dbxref=NCBI_GP:RUP95304.1;Name=RUP95304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119860.1;locus_tag=D8M19_03375;product=RluA family pseudouridine synthase;protein_id=RUP95304.1;transl_table=11 RBLY01000002.1 Genbank gene 335421 335948 . - . ID=gene-D8M19_03380;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=D8M19_03380 RBLY01000002.1 Protein Homology CDS 335421 335948 . - 0 ID=cds-RUP95305.1;Parent=gene-D8M19_03380;Dbxref=NCBI_GP:RUP95305.1;Name=RUP95305.1;gbkey=CDS;gene=lspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600130.1;locus_tag=D8M19_03380;product=signal peptidase II;protein_id=RUP95305.1;transl_table=11 RBLY01000002.1 Genbank gene 336067 337248 . + . ID=gene-D8M19_03385;Name=D8M19_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03385 RBLY01000002.1 GeneMarkS+ CDS 336067 337248 . + 0 ID=cds-RUP95306.1;Parent=gene-D8M19_03385;Dbxref=NCBI_GP:RUP95306.1;Name=RUP95306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03385;product=hypothetical protein;protein_id=RUP95306.1;transl_table=11 RBLY01000002.1 Genbank gene 337621 339294 . + . ID=gene-D8M19_03390;Name=D8M19_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03390 RBLY01000002.1 Protein Homology CDS 337621 339294 . + 0 ID=cds-RUP95307.1;Parent=gene-D8M19_03390;Dbxref=NCBI_GP:RUP95307.1;Name=RUP95307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119864.1;locus_tag=D8M19_03390;product=L-lactate permease;protein_id=RUP95307.1;transl_table=11 RBLY01000002.1 Genbank gene 339415 340038 . - . ID=gene-D8M19_03395;Name=D8M19_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03395 RBLY01000002.1 Protein Homology CDS 339415 340038 . - 0 ID=cds-RUP95308.1;Parent=gene-D8M19_03395;Dbxref=NCBI_GP:RUP95308.1;Name=RUP95308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119865.1;locus_tag=D8M19_03395;product=hypothetical protein;protein_id=RUP95308.1;transl_table=11 RBLY01000002.1 Genbank gene 340146 341102 . + . ID=gene-D8M19_03400;Name=D8M19_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03400 RBLY01000002.1 Protein Homology CDS 340146 341102 . + 0 ID=cds-RUP95309.1;Parent=gene-D8M19_03400;Dbxref=NCBI_GP:RUP95309.1;Name=RUP95309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020888.1;locus_tag=D8M19_03400;product=asparaginase;protein_id=RUP95309.1;transl_table=11 RBLY01000002.1 Genbank gene 341099 342538 . - . ID=gene-D8M19_03405;Name=D8M19_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03405 RBLY01000002.1 Protein Homology CDS 341099 342538 . - 0 ID=cds-RUP95310.1;Parent=gene-D8M19_03405;Dbxref=NCBI_GP:RUP95310.1;Name=RUP95310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839963.1;locus_tag=D8M19_03405;product=DNA polymerase IV;protein_id=RUP95310.1;transl_table=11 ##sequence-region RBLY01000003.1 1 329170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000003.1 Genbank region 1 329170 . + . ID=RBLY01000003.1:1..329170;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000003.1 Genbank gene 131 203 . - . ID=gene-D8M19_03410;Name=D8M19_03410;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_03410 RBLY01000003.1 tRNAscan-SE tRNA 131 203 . - . ID=rna-D8M19_03410;Parent=gene-D8M19_03410;anticodon=(pos:complement(168..170));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03410;product=tRNA-Arg RBLY01000003.1 tRNAscan-SE exon 131 203 . - . ID=exon-D8M19_03410-1;Parent=rna-D8M19_03410;anticodon=(pos:complement(168..170));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03410;product=tRNA-Arg RBLY01000003.1 Genbank gene 361 1944 . - . ID=gene-D8M19_03415;Name=D8M19_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03415 RBLY01000003.1 Protein Homology CDS 361 1944 . - 0 ID=cds-RUP94126.1;Parent=gene-D8M19_03415;Dbxref=NCBI_GP:RUP94126.1;Name=RUP94126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120212.1;locus_tag=D8M19_03415;product=DASS family sodium-coupled anion symporter;protein_id=RUP94126.1;transl_table=11 RBLY01000003.1 Genbank gene 2011 3375 . - . ID=gene-D8M19_03420;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=D8M19_03420 RBLY01000003.1 Protein Homology CDS 2011 3375 . - 0 ID=cds-RUP94127.1;Parent=gene-D8M19_03420;Dbxref=NCBI_GP:RUP94127.1;Name=RUP94127.1;gbkey=CDS;gene=mgtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191304.1;locus_tag=D8M19_03420;product=magnesium transporter;protein_id=RUP94127.1;transl_table=11 RBLY01000003.1 Genbank gene 3522 4262 . - . ID=gene-D8M19_03425;Name=D8M19_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03425 RBLY01000003.1 GeneMarkS+ CDS 3522 4262 . - 0 ID=cds-RUP94128.1;Parent=gene-D8M19_03425;Dbxref=NCBI_GP:RUP94128.1;Name=RUP94128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03425;product=hypothetical protein;protein_id=RUP94128.1;transl_table=11 RBLY01000003.1 Genbank gene 4292 5653 . - . ID=gene-D8M19_03430;Name=D8M19_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03430 RBLY01000003.1 Protein Homology CDS 4292 5653 . - 0 ID=cds-RUP94129.1;Parent=gene-D8M19_03430;Dbxref=NCBI_GP:RUP94129.1;Name=RUP94129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04235.10;locus_tag=D8M19_03430;product=DUF1624 domain-containing protein;protein_id=RUP94129.1;transl_table=11 RBLY01000003.1 Genbank gene 5749 5837 . - . ID=gene-D8M19_03435;Name=D8M19_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_03435 RBLY01000003.1 tRNAscan-SE tRNA 5749 5837 . - . ID=rna-D8M19_03435;Parent=gene-D8M19_03435;anticodon=(pos:complement(5801..5803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03435;product=tRNA-Ser RBLY01000003.1 tRNAscan-SE exon 5749 5837 . - . ID=exon-D8M19_03435-1;Parent=rna-D8M19_03435;anticodon=(pos:complement(5801..5803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03435;product=tRNA-Ser RBLY01000003.1 Genbank gene 5918 6952 . + . ID=gene-D8M19_03440;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D8M19_03440 RBLY01000003.1 Protein Homology CDS 5918 6952 . + 0 ID=cds-RUP94130.1;Parent=gene-D8M19_03440;Dbxref=NCBI_GP:RUP94130.1;Name=RUP94130.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017971.1;locus_tag=D8M19_03440;product=histidinol-phosphate transaminase;protein_id=RUP94130.1;transl_table=11 RBLY01000003.1 Genbank gene 6952 7371 . + . ID=gene-D8M19_03445;Name=D8M19_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03445 RBLY01000003.1 Protein Homology CDS 6952 7371 . + 0 ID=cds-RUP94131.1;Parent=gene-D8M19_03445;Dbxref=NCBI_GP:RUP94131.1;Name=RUP94131.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04020.11;locus_tag=D8M19_03445;product=phage holin family protein;protein_id=RUP94131.1;transl_table=11 RBLY01000003.1 Genbank gene 7558 7779 . + . ID=gene-D8M19_03450;Name=D8M19_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03450 RBLY01000003.1 Protein Homology CDS 7558 7779 . + 0 ID=cds-RUP94132.1;Parent=gene-D8M19_03450;Dbxref=NCBI_GP:RUP94132.1;Name=RUP94132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310898.1;locus_tag=D8M19_03450;product=hypothetical protein;protein_id=RUP94132.1;transl_table=11 RBLY01000003.1 Genbank gene 7944 8031 . - . ID=gene-D8M19_03455;Name=D8M19_03455;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_03455 RBLY01000003.1 tRNAscan-SE tRNA 7944 8031 . - . ID=rna-D8M19_03455;Parent=gene-D8M19_03455;anticodon=(pos:complement(7995..7997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03455;product=tRNA-Ser RBLY01000003.1 tRNAscan-SE exon 7944 8031 . - . ID=exon-D8M19_03455-1;Parent=rna-D8M19_03455;anticodon=(pos:complement(7995..7997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03455;product=tRNA-Ser RBLY01000003.1 Genbank gene 8137 9099 . + . ID=gene-D8M19_03460;Name=D8M19_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03460 RBLY01000003.1 Protein Homology CDS 8137 9099 . + 0 ID=cds-RUP94354.1;Parent=gene-D8M19_03460;Dbxref=NCBI_GP:RUP94354.1;Name=RUP94354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005519279.1;locus_tag=D8M19_03460;product=NAD(P)H-quinone oxidoreductase;protein_id=RUP94354.1;transl_table=11 RBLY01000003.1 Genbank gene 9096 10331 . - . ID=gene-D8M19_03465;Name=D8M19_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03465 RBLY01000003.1 Protein Homology CDS 9096 10331 . - 0 ID=cds-RUP94133.1;Parent=gene-D8M19_03465;Dbxref=NCBI_GP:RUP94133.1;Name=RUP94133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120220.1;locus_tag=D8M19_03465;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=RUP94133.1;transl_table=11 RBLY01000003.1 Genbank gene 10488 11405 . + . ID=gene-D8M19_03470;Name=D8M19_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03470 RBLY01000003.1 Protein Homology CDS 10488 11405 . + 0 ID=cds-RUP94355.1;Parent=gene-D8M19_03470;Dbxref=NCBI_GP:RUP94355.1;Name=RUP94355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018485.1;locus_tag=D8M19_03470;product=ABC transporter permease;protein_id=RUP94355.1;transl_table=11 RBLY01000003.1 Genbank gene 11451 12236 . + . ID=gene-D8M19_03475;Name=D8M19_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03475 RBLY01000003.1 Protein Homology CDS 11451 12236 . + 0 ID=cds-RUP94134.1;Parent=gene-D8M19_03475;Dbxref=NCBI_GP:RUP94134.1;Name=RUP94134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188329.1;locus_tag=D8M19_03475;product=ABC transporter ATP-binding protein;protein_id=RUP94134.1;transl_table=11 RBLY01000003.1 Genbank gene 12296 13240 . + . ID=gene-D8M19_03480;Name=D8M19_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03480 RBLY01000003.1 Protein Homology CDS 12296 13240 . + 0 ID=cds-RUP94135.1;Parent=gene-D8M19_03480;Dbxref=NCBI_GP:RUP94135.1;Name=RUP94135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188322.1;locus_tag=D8M19_03480;product=glycosyltransferase family 2 protein;protein_id=RUP94135.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 13550 13753 . - . ID=gene-D8M19_03485;Name=D8M19_03485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03485;pseudo=true RBLY01000003.1 Protein Homology CDS 13550 13753 . - 0 ID=cds-D8M19_03485;Parent=gene-D8M19_03485;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014523775.1;locus_tag=D8M19_03485;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 13889 14356 . - . ID=gene-D8M19_03490;Name=D8M19_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03490 RBLY01000003.1 Protein Homology CDS 13889 14356 . - 0 ID=cds-RUP94136.1;Parent=gene-D8M19_03490;Dbxref=NCBI_GP:RUP94136.1;Name=RUP94136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120225.1;locus_tag=D8M19_03490;product=GtrA family protein;protein_id=RUP94136.1;transl_table=11 RBLY01000003.1 Genbank gene 14440 15297 . - . ID=gene-D8M19_03495;Name=D8M19_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03495 RBLY01000003.1 GeneMarkS+ CDS 14440 15297 . - 0 ID=cds-RUP94137.1;Parent=gene-D8M19_03495;Dbxref=NCBI_GP:RUP94137.1;Name=RUP94137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03495;product=hypothetical protein;protein_id=RUP94137.1;transl_table=11 RBLY01000003.1 Genbank gene 15364 15612 . + . ID=gene-D8M19_03500;Name=D8M19_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03500 RBLY01000003.1 Protein Homology CDS 15364 15612 . + 0 ID=cds-RUP94138.1;Parent=gene-D8M19_03500;Dbxref=NCBI_GP:RUP94138.1;Name=RUP94138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120227.1;locus_tag=D8M19_03500;product=hypothetical protein;protein_id=RUP94138.1;transl_table=11 RBLY01000003.1 Genbank gene 15621 17036 . + . ID=gene-D8M19_03505;Name=D8M19_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03505 RBLY01000003.1 Protein Homology CDS 15621 17036 . + 0 ID=cds-RUP94139.1;Parent=gene-D8M19_03505;Dbxref=NCBI_GP:RUP94139.1;Name=RUP94139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012361183.1;locus_tag=D8M19_03505;product=FAD-binding oxidoreductase;protein_id=RUP94139.1;transl_table=11 RBLY01000003.1 Genbank gene 17086 17847 . + . ID=gene-D8M19_03510;Name=D8M19_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03510 RBLY01000003.1 Protein Homology CDS 17086 17847 . + 0 ID=cds-RUP94140.1;Parent=gene-D8M19_03510;Dbxref=NCBI_GP:RUP94140.1;Name=RUP94140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323212.1;locus_tag=D8M19_03510;product=decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase;protein_id=RUP94140.1;transl_table=11 RBLY01000003.1 Genbank gene 17878 19791 . + . ID=gene-D8M19_03515;Name=D8M19_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03515 RBLY01000003.1 Protein Homology CDS 17878 19791 . + 0 ID=cds-RUP94141.1;Parent=gene-D8M19_03515;Dbxref=NCBI_GP:RUP94141.1;Name=RUP94141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120230.1;locus_tag=D8M19_03515;product=hypothetical protein;protein_id=RUP94141.1;transl_table=11 RBLY01000003.1 Genbank gene 20007 23216 . + . ID=gene-D8M19_03520;Name=D8M19_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03520 RBLY01000003.1 Protein Homology CDS 20007 23216 . + 0 ID=cds-RUP94356.1;Parent=gene-D8M19_03520;Dbxref=NCBI_GP:RUP94356.1;Name=RUP94356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280635.1;locus_tag=D8M19_03520;product=arabinosyltransferase;protein_id=RUP94356.1;transl_table=11 RBLY01000003.1 Genbank gene 23220 25244 . + . ID=gene-D8M19_03525;Name=D8M19_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03525 RBLY01000003.1 GeneMarkS+ CDS 23220 25244 . + 0 ID=cds-RUP94142.1;Parent=gene-D8M19_03525;Dbxref=NCBI_GP:RUP94142.1;Name=RUP94142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03525;product=hypothetical protein;protein_id=RUP94142.1;transl_table=11 RBLY01000003.1 Genbank gene 25269 26201 . + . ID=gene-D8M19_03530;Name=D8M19_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03530 RBLY01000003.1 Protein Homology CDS 25269 26201 . + 0 ID=cds-RUP94143.1;Parent=gene-D8M19_03530;Dbxref=NCBI_GP:RUP94143.1;Name=RUP94143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016705619.1;locus_tag=D8M19_03530;product=NAD-dependent epimerase/dehydratase family protein;protein_id=RUP94143.1;transl_table=11 RBLY01000003.1 Genbank gene 26262 26669 . - . ID=gene-D8M19_03535;Name=D8M19_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03535 RBLY01000003.1 Protein Homology CDS 26262 26669 . - 0 ID=cds-RUP94144.1;Parent=gene-D8M19_03535;Dbxref=NCBI_GP:RUP94144.1;Name=RUP94144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399806.1;locus_tag=D8M19_03535;product=DUF2304 domain-containing protein;protein_id=RUP94144.1;transl_table=11 RBLY01000003.1 Genbank gene 26670 27362 . - . ID=gene-D8M19_03540;Name=D8M19_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03540 RBLY01000003.1 Protein Homology CDS 26670 27362 . - 0 ID=cds-RUP94145.1;Parent=gene-D8M19_03540;Dbxref=NCBI_GP:RUP94145.1;Name=RUP94145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120235.1;locus_tag=D8M19_03540;product=glycosyltransferase family 2 protein;protein_id=RUP94145.1;transl_table=11 RBLY01000003.1 Genbank gene 27379 28710 . - . ID=gene-D8M19_03545;Name=D8M19_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03545 RBLY01000003.1 GeneMarkS+ CDS 27379 28710 . - 0 ID=cds-RUP94146.1;Parent=gene-D8M19_03545;Dbxref=NCBI_GP:RUP94146.1;Name=RUP94146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03545;product=polysaccharide biosynthesis protein;protein_id=RUP94146.1;transl_table=11 RBLY01000003.1 Genbank gene 28732 29625 . - . ID=gene-D8M19_03550;Name=D8M19_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03550 RBLY01000003.1 Protein Homology CDS 28732 29625 . - 0 ID=cds-RUP94147.1;Parent=gene-D8M19_03550;Dbxref=NCBI_GP:RUP94147.1;Name=RUP94147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13641.4;locus_tag=D8M19_03550;product=glycosyltransferase;protein_id=RUP94147.1;transl_table=11 RBLY01000003.1 Genbank gene 29625 30530 . - . ID=gene-D8M19_03555;Name=D8M19_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03555 RBLY01000003.1 GeneMarkS+ CDS 29625 30530 . - 0 ID=cds-RUP94148.1;Parent=gene-D8M19_03555;Dbxref=NCBI_GP:RUP94148.1;Name=RUP94148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03555;product=hypothetical protein;protein_id=RUP94148.1;transl_table=11 RBLY01000003.1 Genbank gene 30687 31301 . + . ID=gene-D8M19_03560;Name=D8M19_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03560 RBLY01000003.1 GeneMarkS+ CDS 30687 31301 . + 0 ID=cds-RUP94149.1;Parent=gene-D8M19_03560;Dbxref=NCBI_GP:RUP94149.1;Name=RUP94149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03560;product=hypothetical protein;protein_id=RUP94149.1;transl_table=11 RBLY01000003.1 Genbank gene 31347 33332 . - . ID=gene-D8M19_03565;Name=D8M19_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03565 RBLY01000003.1 Protein Homology CDS 31347 33332 . - 0 ID=cds-RUP94150.1;Parent=gene-D8M19_03565;Dbxref=NCBI_GP:RUP94150.1;Name=RUP94150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120240.1;locus_tag=D8M19_03565;product=peptidase M13;protein_id=RUP94150.1;transl_table=11 RBLY01000003.1 Genbank gene 33361 34080 . + . ID=gene-D8M19_03570;Name=D8M19_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03570 RBLY01000003.1 GeneMarkS+ CDS 33361 34080 . + 0 ID=cds-RUP94151.1;Parent=gene-D8M19_03570;Dbxref=NCBI_GP:RUP94151.1;Name=RUP94151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03570;product=hypothetical protein;protein_id=RUP94151.1;transl_table=11 RBLY01000003.1 Genbank gene 34083 34937 . + . ID=gene-D8M19_03575;Name=D8M19_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03575 RBLY01000003.1 Protein Homology CDS 34083 34937 . + 0 ID=cds-RUP94152.1;Parent=gene-D8M19_03575;Dbxref=NCBI_GP:RUP94152.1;Name=RUP94152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13367.4;locus_tag=D8M19_03575;product=PrsW family intramembrane metalloprotease;protein_id=RUP94152.1;transl_table=11 RBLY01000003.1 Genbank gene 34938 36536 . - . ID=gene-D8M19_03580;Name=D8M19_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03580 RBLY01000003.1 Protein Homology CDS 34938 36536 . - 0 ID=cds-RUP94153.1;Parent=gene-D8M19_03580;Dbxref=NCBI_GP:RUP94153.1;Name=RUP94153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120243.1;locus_tag=D8M19_03580;product=betaine-aldehyde dehydrogenase;protein_id=RUP94153.1;transl_table=11 RBLY01000003.1 Genbank gene 36619 37326 . - . ID=gene-D8M19_03585;Name=D8M19_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03585 RBLY01000003.1 Protein Homology CDS 36619 37326 . - 0 ID=cds-RUP94357.1;Parent=gene-D8M19_03585;Dbxref=NCBI_GP:RUP94357.1;Name=RUP94357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120244.1;locus_tag=D8M19_03585;product=S1 family peptidase;protein_id=RUP94357.1;transl_table=11 RBLY01000003.1 Genbank gene 37438 38334 . - . ID=gene-D8M19_03590;Name=D8M19_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03590 RBLY01000003.1 Protein Homology CDS 37438 38334 . - 0 ID=cds-RUP94358.1;Parent=gene-D8M19_03590;Dbxref=NCBI_GP:RUP94358.1;Name=RUP94358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120245.1;locus_tag=D8M19_03590;product=S1 family peptidase;protein_id=RUP94358.1;transl_table=11 RBLY01000003.1 Genbank gene 38817 40982 . - . ID=gene-D8M19_03595;Name=D8M19_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03595 RBLY01000003.1 Protein Homology CDS 38817 40982 . - 0 ID=cds-RUP94154.1;Parent=gene-D8M19_03595;Dbxref=NCBI_GP:RUP94154.1;Name=RUP94154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120246.1;locus_tag=D8M19_03595;product=BCCT family transporter;protein_id=RUP94154.1;transl_table=11 RBLY01000003.1 Genbank gene 41212 42984 . + . ID=gene-D8M19_03600;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=D8M19_03600 RBLY01000003.1 Protein Homology CDS 41212 42984 . + 0 ID=cds-RUP94359.1;Parent=gene-D8M19_03600;Dbxref=NCBI_GP:RUP94359.1;Name=RUP94359.1;gbkey=CDS;gene=betA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530497.1;locus_tag=D8M19_03600;product=choline dehydrogenase;protein_id=RUP94359.1;transl_table=11 RBLY01000003.1 Genbank gene 43001 44599 . - . ID=gene-D8M19_03605;Name=D8M19_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03605 RBLY01000003.1 Protein Homology CDS 43001 44599 . - 0 ID=cds-RUP94155.1;Parent=gene-D8M19_03605;Dbxref=NCBI_GP:RUP94155.1;Name=RUP94155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120248.1;locus_tag=D8M19_03605;product=PepSY domain-containing protein;protein_id=RUP94155.1;transl_table=11 RBLY01000003.1 Genbank gene 44827 45777 . + . ID=gene-D8M19_03610;Name=D8M19_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03610 RBLY01000003.1 Protein Homology CDS 44827 45777 . + 0 ID=cds-RUP94156.1;Parent=gene-D8M19_03610;Dbxref=NCBI_GP:RUP94156.1;Name=RUP94156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01263.18;locus_tag=D8M19_03610;product=aldose epimerase;protein_id=RUP94156.1;transl_table=11 RBLY01000003.1 Genbank gene 45946 47601 . + . ID=gene-D8M19_03615;Name=D8M19_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03615 RBLY01000003.1 Protein Homology CDS 45946 47601 . + 0 ID=cds-RUP94157.1;Parent=gene-D8M19_03615;Dbxref=NCBI_GP:RUP94157.1;Name=RUP94157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014303240.1;locus_tag=D8M19_03615;product=Na+/galactose cotransporter;protein_id=RUP94157.1;transl_table=11 RBLY01000003.1 Genbank gene 47620 47952 . + . ID=gene-D8M19_03620;Name=D8M19_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03620 RBLY01000003.1 Protein Homology CDS 47620 47952 . + 0 ID=cds-RUP94158.1;Parent=gene-D8M19_03620;Dbxref=NCBI_GP:RUP94158.1;Name=RUP94158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120251.1;locus_tag=D8M19_03620;product=hypothetical protein;protein_id=RUP94158.1;transl_table=11 RBLY01000003.1 Genbank gene 47955 49223 . + . ID=gene-D8M19_03625;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=D8M19_03625 RBLY01000003.1 Protein Homology CDS 47955 49223 . + 0 ID=cds-RUP94159.1;Parent=gene-D8M19_03625;Dbxref=NCBI_GP:RUP94159.1;Name=RUP94159.1;gbkey=CDS;gene=galT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005296822.1;locus_tag=D8M19_03625;product=galactose-1-phosphate uridylyltransferase;protein_id=RUP94159.1;transl_table=11 RBLY01000003.1 Genbank gene 49216 50475 . + . ID=gene-D8M19_03630;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=D8M19_03630 RBLY01000003.1 Protein Homology CDS 49216 50475 . + 0 ID=cds-RUP94160.1;Parent=gene-D8M19_03630;Dbxref=NCBI_GP:RUP94160.1;Name=RUP94160.1;gbkey=CDS;gene=galK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934744.1;locus_tag=D8M19_03630;product=galactokinase;protein_id=RUP94160.1;transl_table=11 RBLY01000003.1 Genbank gene 50615 51031 . + . ID=gene-D8M19_03635;Name=D8M19_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03635 RBLY01000003.1 Protein Homology CDS 50615 51031 . + 0 ID=cds-RUP94161.1;Parent=gene-D8M19_03635;Dbxref=NCBI_GP:RUP94161.1;Name=RUP94161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360928.1;locus_tag=D8M19_03635;product=aspartate 1-decarboxylase;protein_id=RUP94161.1;transl_table=11 RBLY01000003.1 Genbank gene 51033 52493 . + . ID=gene-D8M19_03640;Name=D8M19_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03640 RBLY01000003.1 Protein Homology CDS 51033 52493 . + 0 ID=cds-RUP94162.1;Parent=gene-D8M19_03640;Dbxref=NCBI_GP:RUP94162.1;Name=RUP94162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015490686.1;locus_tag=D8M19_03640;product=DASS family sodium-coupled anion symporter;protein_id=RUP94162.1;transl_table=11 RBLY01000003.1 Genbank gene 52510 53817 . - . ID=gene-D8M19_03645;Name=D8M19_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03645 RBLY01000003.1 Protein Homology CDS 52510 53817 . - 0 ID=cds-RUP94360.1;Parent=gene-D8M19_03645;Dbxref=NCBI_GP:RUP94360.1;Name=RUP94360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279191.1;locus_tag=D8M19_03645;product=anaerobic C4-dicarboxylate transporter;protein_id=RUP94360.1;transl_table=11 RBLY01000003.1 Genbank gene 54390 56027 . + . ID=gene-D8M19_03650;Name=D8M19_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03650 RBLY01000003.1 Protein Homology CDS 54390 56027 . + 0 ID=cds-RUP94163.1;Parent=gene-D8M19_03650;Dbxref=NCBI_GP:RUP94163.1;Name=RUP94163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120258.1;locus_tag=D8M19_03650;product=HNH endonuclease;protein_id=RUP94163.1;transl_table=11 RBLY01000003.1 Genbank gene 56382 57047 . + . ID=gene-D8M19_03655;Name=D8M19_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03655 RBLY01000003.1 Protein Homology CDS 56382 57047 . + 0 ID=cds-RUP94164.1;Parent=gene-D8M19_03655;Dbxref=NCBI_GP:RUP94164.1;Name=RUP94164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120276.1;locus_tag=D8M19_03655;product=MOSC domain-containing protein;protein_id=RUP94164.1;transl_table=11 RBLY01000003.1 Genbank gene 57174 58538 . + . ID=gene-D8M19_03660;Name=D8M19_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03660 RBLY01000003.1 Protein Homology CDS 57174 58538 . + 0 ID=cds-RUP94165.1;Parent=gene-D8M19_03660;Dbxref=NCBI_GP:RUP94165.1;Name=RUP94165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005275975.1;locus_tag=D8M19_03660;product=MFS transporter;protein_id=RUP94165.1;transl_table=11 RBLY01000003.1 Genbank gene 58740 59570 . - . ID=gene-D8M19_03665;Name=D8M19_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03665 RBLY01000003.1 Protein Homology CDS 58740 59570 . - 0 ID=cds-RUP94166.1;Parent=gene-D8M19_03665;Dbxref=NCBI_GP:RUP94166.1;Name=RUP94166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010934059.1;locus_tag=D8M19_03665;product=VOC family protein;protein_id=RUP94166.1;transl_table=11 RBLY01000003.1 Genbank gene 59570 59890 . - . ID=gene-D8M19_03670;Name=D8M19_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03670 RBLY01000003.1 Protein Homology CDS 59570 59890 . - 0 ID=cds-RUP94167.1;Parent=gene-D8M19_03670;Dbxref=NCBI_GP:RUP94167.1;Name=RUP94167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120288.1;locus_tag=D8M19_03670;product=RNA-binding S4 domain-containing protein;protein_id=RUP94167.1;transl_table=11 RBLY01000003.1 Genbank gene 59924 60655 . - . ID=gene-D8M19_03675;Name=D8M19_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03675 RBLY01000003.1 Protein Homology CDS 59924 60655 . - 0 ID=cds-RUP94168.1;Parent=gene-D8M19_03675;Dbxref=NCBI_GP:RUP94168.1;Name=RUP94168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651725.1;locus_tag=D8M19_03675;product=SDR family oxidoreductase;protein_id=RUP94168.1;transl_table=11 RBLY01000003.1 Genbank gene 60719 61801 . + . ID=gene-D8M19_03680;Name=D8M19_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03680 RBLY01000003.1 Protein Homology CDS 60719 61801 . + 0 ID=cds-RUP94169.1;Parent=gene-D8M19_03680;Dbxref=NCBI_GP:RUP94169.1;Name=RUP94169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120290.1;locus_tag=D8M19_03680;product=AbrB family transcriptional regulator;protein_id=RUP94169.1;transl_table=11 RBLY01000003.1 Genbank gene 62307 62609 . - . ID=gene-D8M19_03685;Name=D8M19_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03685 RBLY01000003.1 GeneMarkS+ CDS 62307 62609 . - 0 ID=cds-RUP94170.1;Parent=gene-D8M19_03685;Dbxref=NCBI_GP:RUP94170.1;Name=RUP94170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03685;product=hypothetical protein;protein_id=RUP94170.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 62859 63690 . + . ID=gene-D8M19_03690;Name=D8M19_03690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03690;pseudo=true RBLY01000003.1 Protein Homology CDS 62859 63690 . + 0 ID=cds-D8M19_03690;Parent=gene-D8M19_03690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120292.1;locus_tag=D8M19_03690;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 63721 64779 . + . ID=gene-D8M19_03695;Name=D8M19_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03695 RBLY01000003.1 Protein Homology CDS 63721 64779 . + 0 ID=cds-RUP94171.1;Parent=gene-D8M19_03695;Dbxref=NCBI_GP:RUP94171.1;Name=RUP94171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120293.1;locus_tag=D8M19_03695;product=ATP-binding cassette domain-containing protein;protein_id=RUP94171.1;transl_table=11 RBLY01000003.1 Genbank gene 64779 65456 . + . ID=gene-D8M19_03700;Name=D8M19_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03700 RBLY01000003.1 Protein Homology CDS 64779 65456 . + 0 ID=cds-RUP94172.1;Parent=gene-D8M19_03700;Dbxref=NCBI_GP:RUP94172.1;Name=RUP94172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120294.1;locus_tag=D8M19_03700;product=ABC transporter permease;protein_id=RUP94172.1;transl_table=11 RBLY01000003.1 Genbank gene 65552 68011 . - . ID=gene-D8M19_03705;Name=D8M19_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03705 RBLY01000003.1 Protein Homology CDS 65552 68011 . - 0 ID=cds-RUP94173.1;Parent=gene-D8M19_03705;Dbxref=NCBI_GP:RUP94173.1;Name=RUP94173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599966.1;locus_tag=D8M19_03705;product=ATP-dependent helicase;protein_id=RUP94173.1;transl_table=11 RBLY01000003.1 Genbank gene 68008 74523 . - . ID=gene-D8M19_03710;Name=D8M19_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03710 RBLY01000003.1 Protein Homology CDS 68008 74523 . - 0 ID=cds-RUP94174.1;Parent=gene-D8M19_03710;Dbxref=NCBI_GP:RUP94174.1;Name=RUP94174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768747.1;locus_tag=D8M19_03710;product=DEAD/DEAH box helicase;protein_id=RUP94174.1;transl_table=11 RBLY01000003.1 Genbank gene 74542 79116 . - . ID=gene-D8M19_03715;Name=D8M19_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03715 RBLY01000003.1 Protein Homology CDS 74542 79116 . - 0 ID=cds-RUP94175.1;Parent=gene-D8M19_03715;Dbxref=NCBI_GP:RUP94175.1;Name=RUP94175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768744.1;locus_tag=D8M19_03715;product=class I SAM-dependent DNA methyltransferase;protein_id=RUP94175.1;transl_table=11 RBLY01000003.1 Genbank gene 79121 82069 . - . ID=gene-D8M19_03720;Name=D8M19_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03720 RBLY01000003.1 Protein Homology CDS 79121 82069 . - 0 ID=cds-RUP94176.1;Parent=gene-D8M19_03720;Dbxref=NCBI_GP:RUP94176.1;Name=RUP94176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768741.1;locus_tag=D8M19_03720;product=DEAD/DEAH box helicase;protein_id=RUP94176.1;transl_table=11 RBLY01000003.1 Genbank gene 82322 83005 . + . ID=gene-D8M19_03725;Name=D8M19_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03725 RBLY01000003.1 Protein Homology CDS 82322 83005 . + 0 ID=cds-RUP94177.1;Parent=gene-D8M19_03725;Dbxref=NCBI_GP:RUP94177.1;Name=RUP94177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003850113.1;locus_tag=D8M19_03725;product=hypothetical protein;protein_id=RUP94177.1;transl_table=11 RBLY01000003.1 Genbank gene 83168 84859 . - . ID=gene-D8M19_03730;Name=D8M19_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03730 RBLY01000003.1 Protein Homology CDS 83168 84859 . - 0 ID=cds-RUP94361.1;Parent=gene-D8M19_03730;Dbxref=NCBI_GP:RUP94361.1;Name=RUP94361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188270.1;locus_tag=D8M19_03730;product=DUF885 domain-containing protein;protein_id=RUP94361.1;transl_table=11 RBLY01000003.1 Genbank gene 85096 86343 . + . ID=gene-D8M19_03735;Name=D8M19_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03735 RBLY01000003.1 Protein Homology CDS 85096 86343 . + 0 ID=cds-RUP94178.1;Parent=gene-D8M19_03735;Dbxref=NCBI_GP:RUP94178.1;Name=RUP94178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120297.1;locus_tag=D8M19_03735;product=ROK family protein;protein_id=RUP94178.1;transl_table=11 RBLY01000003.1 Genbank gene 86400 86918 . - . ID=gene-D8M19_03740;Name=D8M19_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03740 RBLY01000003.1 Protein Homology CDS 86400 86918 . - 0 ID=cds-RUP94179.1;Parent=gene-D8M19_03740;Dbxref=NCBI_GP:RUP94179.1;Name=RUP94179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120298.1;locus_tag=D8M19_03740;product=gamma carbonic anhydrase family protein;protein_id=RUP94179.1;transl_table=11 RBLY01000003.1 Genbank gene 86958 87623 . - . ID=gene-D8M19_03745;Name=D8M19_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03745 RBLY01000003.1 GeneMarkS+ CDS 86958 87623 . - 0 ID=cds-RUP94180.1;Parent=gene-D8M19_03745;Dbxref=NCBI_GP:RUP94180.1;Name=RUP94180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03745;product=HAD family hydrolase;protein_id=RUP94180.1;transl_table=11 RBLY01000003.1 Genbank gene 87694 90012 . - . ID=gene-D8M19_03750;Name=D8M19_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03750 RBLY01000003.1 Protein Homology CDS 87694 90012 . - 0 ID=cds-RUP94181.1;Parent=gene-D8M19_03750;Dbxref=NCBI_GP:RUP94181.1;Name=RUP94181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12799.5;locus_tag=D8M19_03750;product=hypothetical protein;protein_id=RUP94181.1;transl_table=11 RBLY01000003.1 Genbank gene 90169 90483 . - . ID=gene-D8M19_03755;Name=D8M19_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03755 RBLY01000003.1 GeneMarkS+ CDS 90169 90483 . - 0 ID=cds-RUP94182.1;Parent=gene-D8M19_03755;Dbxref=NCBI_GP:RUP94182.1;Name=RUP94182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03755;product=hypothetical protein;protein_id=RUP94182.1;transl_table=11 RBLY01000003.1 Genbank gene 90598 91455 . - . ID=gene-D8M19_03760;Name=D8M19_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03760 RBLY01000003.1 Protein Homology CDS 90598 91455 . - 0 ID=cds-RUP94183.1;Parent=gene-D8M19_03760;Dbxref=NCBI_GP:RUP94183.1;Name=RUP94183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836033.1;locus_tag=D8M19_03760;product=heme ABC transporter ATP-binding protein;protein_id=RUP94183.1;transl_table=11 RBLY01000003.1 Genbank gene 91455 92537 . - . ID=gene-D8M19_03765;Name=D8M19_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03765 RBLY01000003.1 Protein Homology CDS 91455 92537 . - 0 ID=cds-RUP94184.1;Parent=gene-D8M19_03765;Dbxref=NCBI_GP:RUP94184.1;Name=RUP94184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007271984.1;locus_tag=D8M19_03765;product=iron ABC transporter permease;protein_id=RUP94184.1;transl_table=11 RBLY01000003.1 Genbank gene 92491 93585 . - . ID=gene-D8M19_03770;Name=D8M19_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03770 RBLY01000003.1 Protein Homology CDS 92491 93585 . - 0 ID=cds-RUP94185.1;Parent=gene-D8M19_03770;Dbxref=NCBI_GP:RUP94185.1;Name=RUP94185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190610.1;locus_tag=D8M19_03770;product=hemin ABC transporter substrate-binding protein;protein_id=RUP94185.1;transl_table=11 RBLY01000003.1 Genbank gene 93693 95585 . - . ID=gene-D8M19_03775;Name=D8M19_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03775 RBLY01000003.1 Protein Homology CDS 93693 95585 . - 0 ID=cds-RUP94362.1;Parent=gene-D8M19_03775;Dbxref=NCBI_GP:RUP94362.1;Name=RUP94362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280752.1;locus_tag=D8M19_03775;product=hypothetical protein;protein_id=RUP94362.1;transl_table=11 RBLY01000003.1 Genbank gene 95828 96331 . + . ID=gene-D8M19_03780;Name=D8M19_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03780 RBLY01000003.1 GeneMarkS+ CDS 95828 96331 . + 0 ID=cds-RUP94186.1;Parent=gene-D8M19_03780;Dbxref=NCBI_GP:RUP94186.1;Name=RUP94186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03780;product=hypothetical protein;protein_id=RUP94186.1;transl_table=11 RBLY01000003.1 Genbank gene 96550 99291 . - . ID=gene-D8M19_03785;Name=D8M19_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03785 RBLY01000003.1 Protein Homology CDS 96550 99291 . - 0 ID=cds-RUP94187.1;Parent=gene-D8M19_03785;Dbxref=NCBI_GP:RUP94187.1;Name=RUP94187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M19_03785;product=hypothetical protein;protein_id=RUP94187.1;transl_table=11 RBLY01000003.1 Genbank gene 99420 100388 . - . ID=gene-D8M19_03790;Name=D8M19_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03790 RBLY01000003.1 Protein Homology CDS 99420 100388 . - 0 ID=cds-RUP94188.1;Parent=gene-D8M19_03790;Dbxref=NCBI_GP:RUP94188.1;Name=RUP94188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M19_03790;product=hypothetical protein;protein_id=RUP94188.1;transl_table=11 RBLY01000003.1 Genbank gene 100843 103161 . - . ID=gene-D8M19_03795;Name=D8M19_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03795 RBLY01000003.1 Protein Homology CDS 100843 103161 . - 0 ID=cds-RUP94189.1;Parent=gene-D8M19_03795;Dbxref=NCBI_GP:RUP94189.1;Name=RUP94189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04213.11;locus_tag=D8M19_03795;product=hypothetical protein;protein_id=RUP94189.1;transl_table=11 RBLY01000003.1 Genbank gene 103351 104355 . - . ID=gene-D8M19_03800;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D8M19_03800 RBLY01000003.1 Protein Homology CDS 103351 104355 . - 0 ID=cds-RUP94190.1;Parent=gene-D8M19_03800;Dbxref=NCBI_GP:RUP94190.1;Name=RUP94190.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120308.1;locus_tag=D8M19_03800;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=RUP94190.1;transl_table=11 RBLY01000003.1 Genbank gene 104359 104817 . - . ID=gene-D8M19_03805;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D8M19_03805 RBLY01000003.1 Protein Homology CDS 104359 104817 . - 0 ID=cds-RUP94191.1;Parent=gene-D8M19_03805;Dbxref=NCBI_GP:RUP94191.1;Name=RUP94191.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120309.1;locus_tag=D8M19_03805;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=RUP94191.1;transl_table=11 RBLY01000003.1 Genbank gene 105950 106789 . + . ID=gene-D8M19_03810;Name=D8M19_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03810 RBLY01000003.1 Protein Homology CDS 105950 106789 . + 0 ID=cds-RUP94363.1;Parent=gene-D8M19_03810;Dbxref=NCBI_GP:RUP94363.1;Name=RUP94363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188257.1;locus_tag=D8M19_03810;product=triacylglycerol lipase;protein_id=RUP94363.1;transl_table=11 RBLY01000003.1 Genbank gene 106856 107821 . - . ID=gene-D8M19_03815;Name=D8M19_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03815 RBLY01000003.1 Protein Homology CDS 106856 107821 . - 0 ID=cds-RUP94192.1;Parent=gene-D8M19_03815;Dbxref=NCBI_GP:RUP94192.1;Name=RUP94192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120311.1;locus_tag=D8M19_03815;product=NAD-dependent protein deacetylase;protein_id=RUP94192.1;transl_table=11 RBLY01000003.1 Genbank gene 107909 108214 . - . ID=gene-D8M19_03820;Name=D8M19_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03820 RBLY01000003.1 Protein Homology CDS 107909 108214 . - 0 ID=cds-RUP94193.1;Parent=gene-D8M19_03820;Dbxref=NCBI_GP:RUP94193.1;Name=RUP94193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120312.1;locus_tag=D8M19_03820;product=hypothetical protein;protein_id=RUP94193.1;transl_table=11 RBLY01000003.1 Genbank gene 108245 109225 . - . ID=gene-D8M19_03825;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=D8M19_03825 RBLY01000003.1 Protein Homology CDS 108245 109225 . - 0 ID=cds-RUP94194.1;Parent=gene-D8M19_03825;Dbxref=NCBI_GP:RUP94194.1;Name=RUP94194.1;gbkey=CDS;gene=bioB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188252.1;locus_tag=D8M19_03825;product=biotin synthase BioB;protein_id=RUP94194.1;transl_table=11 RBLY01000003.1 Genbank gene 109346 110125 . + . ID=gene-D8M19_03830;Name=D8M19_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03830 RBLY01000003.1 Protein Homology CDS 109346 110125 . + 0 ID=cds-RUP94195.1;Parent=gene-D8M19_03830;Dbxref=NCBI_GP:RUP94195.1;Name=RUP94195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120314.1;locus_tag=D8M19_03830;product=DUF4442 domain-containing protein;protein_id=RUP94195.1;transl_table=11 RBLY01000003.1 Genbank gene 110162 111502 . + . ID=gene-D8M19_03835;Name=D8M19_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03835 RBLY01000003.1 Protein Homology CDS 110162 111502 . + 0 ID=cds-RUP94196.1;Parent=gene-D8M19_03835;Dbxref=NCBI_GP:RUP94196.1;Name=RUP94196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022304.1;locus_tag=D8M19_03835;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP94196.1;transl_table=11 RBLY01000003.1 Genbank gene 111510 112556 . - . ID=gene-D8M19_03840;Name=D8M19_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03840 RBLY01000003.1 Protein Homology CDS 111510 112556 . - 0 ID=cds-RUP94197.1;Parent=gene-D8M19_03840;Dbxref=NCBI_GP:RUP94197.1;Name=RUP94197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014655115.1;locus_tag=D8M19_03840;product=iron ABC transporter permease;protein_id=RUP94197.1;transl_table=11 RBLY01000003.1 Genbank gene 112559 113650 . - . ID=gene-D8M19_03845;Name=D8M19_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03845 RBLY01000003.1 Protein Homology CDS 112559 113650 . - 0 ID=cds-RUP94198.1;Parent=gene-D8M19_03845;Dbxref=NCBI_GP:RUP94198.1;Name=RUP94198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530549.1;locus_tag=D8M19_03845;product=hemin ABC transporter substrate-binding protein;protein_id=RUP94198.1;transl_table=11 RBLY01000003.1 Genbank gene 113652 114335 . - . ID=gene-D8M19_03850;Name=D8M19_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03850 RBLY01000003.1 Protein Homology CDS 113652 114335 . - 0 ID=cds-RUP94199.1;Parent=gene-D8M19_03850;Dbxref=NCBI_GP:RUP94199.1;Name=RUP94199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120318.1;locus_tag=D8M19_03850;product=biliverdin-producing heme oxygenase;protein_id=RUP94199.1;transl_table=11 RBLY01000003.1 Genbank gene 114912 116678 . - . ID=gene-D8M19_03855;Name=D8M19_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03855 RBLY01000003.1 Protein Homology CDS 114912 116678 . - 0 ID=cds-RUP94200.1;Parent=gene-D8M19_03855;Dbxref=NCBI_GP:RUP94200.1;Name=RUP94200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121662.1;locus_tag=D8M19_03855;product=hypothetical protein;protein_id=RUP94200.1;transl_table=11 RBLY01000003.1 Genbank gene 116675 117763 . - . ID=gene-D8M19_03860;Name=D8M19_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03860 RBLY01000003.1 Protein Homology CDS 116675 117763 . - 0 ID=cds-RUP94364.1;Parent=gene-D8M19_03860;Dbxref=NCBI_GP:RUP94364.1;Name=RUP94364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014317386.1;locus_tag=D8M19_03860;product=hypothetical protein;protein_id=RUP94364.1;transl_table=11 RBLY01000003.1 Genbank gene 117980 118207 . - . ID=gene-D8M19_03865;Name=D8M19_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03865 RBLY01000003.1 GeneMarkS+ CDS 117980 118207 . - 0 ID=cds-RUP94201.1;Parent=gene-D8M19_03865;Dbxref=NCBI_GP:RUP94201.1;Name=RUP94201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03865;product=hypothetical protein;protein_id=RUP94201.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 118529 118855 . + . ID=gene-D8M19_03870;Name=D8M19_03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03870;pseudo=true RBLY01000003.1 Protein Homology CDS 118529 118855 . + 0 ID=cds-D8M19_03870;Parent=gene-D8M19_03870;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010122907.1;locus_tag=D8M19_03870;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 118937 120085 . + . ID=gene-D8M19_03875;Name=D8M19_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03875 RBLY01000003.1 GeneMarkS+ CDS 118937 120085 . + 0 ID=cds-RUP94202.1;Parent=gene-D8M19_03875;Dbxref=NCBI_GP:RUP94202.1;Name=RUP94202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03875;product=hypothetical protein;protein_id=RUP94202.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 120366 120512 . + . ID=gene-D8M19_03880;Name=D8M19_03880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03880;pseudo=true RBLY01000003.1 Protein Homology CDS 120366 120512 . + 0 ID=cds-D8M19_03880;Parent=gene-D8M19_03880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017521.1;locus_tag=D8M19_03880;product=recombinase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank pseudogene 120680 123278 . + . ID=gene-D8M19_03885;Name=D8M19_03885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03885;pseudo=true RBLY01000003.1 Protein Homology CDS 120680 123278 . + 0 ID=cds-D8M19_03885;Parent=gene-D8M19_03885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360513.1;locus_tag=D8M19_03885;product=type I restriction-modification system subunit M;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 123262 124428 . + . ID=gene-D8M19_03890;Name=D8M19_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03890 RBLY01000003.1 Protein Homology CDS 123262 124428 . + 0 ID=cds-RUP94203.1;Parent=gene-D8M19_03890;Dbxref=NCBI_GP:RUP94203.1;Name=RUP94203.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01420.17;locus_tag=D8M19_03890;product=restriction endonuclease subunit S;protein_id=RUP94203.1;transl_table=11 RBLY01000003.1 Genbank gene 124438 127632 . + . ID=gene-D8M19_03895;Name=D8M19_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03895 RBLY01000003.1 Protein Homology CDS 124438 127632 . + 0 ID=cds-RUP94204.1;Parent=gene-D8M19_03895;Dbxref=NCBI_GP:RUP94204.1;Name=RUP94204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014306625.1;locus_tag=D8M19_03895;product=type I restriction endonuclease subunit R;protein_id=RUP94204.1;transl_table=11 RBLY01000003.1 Genbank gene 127635 128207 . + . ID=gene-D8M19_03900;Name=D8M19_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03900 RBLY01000003.1 Protein Homology CDS 127635 128207 . + 0 ID=cds-RUP94205.1;Parent=gene-D8M19_03900;Dbxref=NCBI_GP:RUP94205.1;Name=RUP94205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848262.1;locus_tag=D8M19_03900;product=recombinase family protein;protein_id=RUP94205.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 128407 128582 . - . ID=gene-D8M19_03905;Name=D8M19_03905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03905;pseudo=true RBLY01000003.1 Protein Homology CDS 128407 128582 . - 0 ID=cds-D8M19_03905;Parent=gene-D8M19_03905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189588.1;locus_tag=D8M19_03905;product=transposase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 128651 128716 . + . ID=gene-D8M19_03910;Name=D8M19_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03910 RBLY01000003.1 Protein Homology CDS 128651 128716 . + 0 ID=cds-RUP94365.1;Parent=gene-D8M19_03910;Dbxref=NCBI_GP:RUP94365.1;Name=RUP94365.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08051.9;locus_tag=D8M19_03910;product=erythromycin resistance leader peptide;protein_id=RUP94365.1;transl_table=11 RBLY01000003.1 Genbank gene 128816 129670 . + . ID=gene-D8M19_03915;Name=D8M19_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03915 RBLY01000003.1 Protein Homology CDS 128816 129670 . + 0 ID=cds-RUP94206.1;Parent=gene-D8M19_03915;Dbxref=NCBI_GP:RUP94206.1;Name=RUP94206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152925.1;locus_tag=D8M19_03915;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(X);protein_id=RUP94206.1;transl_table=11 RBLY01000003.1 Genbank gene 130494 130581 . - . ID=gene-D8M19_03920;Name=D8M19_03920;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_03920 RBLY01000003.1 tRNAscan-SE tRNA 130494 130581 . - . ID=rna-D8M19_03920;Parent=gene-D8M19_03920;anticodon=(pos:complement(130545..130547));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03920;product=tRNA-Leu RBLY01000003.1 tRNAscan-SE exon 130494 130581 . - . ID=exon-D8M19_03920-1;Parent=rna-D8M19_03920;anticodon=(pos:complement(130545..130547));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_03920;product=tRNA-Leu RBLY01000003.1 Genbank gene 130887 131792 . + . ID=gene-D8M19_03925;Name=D8M19_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03925 RBLY01000003.1 Protein Homology CDS 130887 131792 . + 0 ID=cds-RUP94207.1;Parent=gene-D8M19_03925;Dbxref=NCBI_GP:RUP94207.1;Name=RUP94207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120319.1;locus_tag=D8M19_03925;product=DUF2662 domain-containing protein;protein_id=RUP94207.1;transl_table=11 RBLY01000003.1 Genbank gene 131822 132289 . + . ID=gene-D8M19_03930;Name=D8M19_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03930 RBLY01000003.1 Protein Homology CDS 131822 132289 . + 0 ID=cds-RUP94208.1;Parent=gene-D8M19_03930;Dbxref=NCBI_GP:RUP94208.1;Name=RUP94208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120320.1;locus_tag=D8M19_03930;product=FHA domain-containing protein;protein_id=RUP94208.1;transl_table=11 RBLY01000003.1 Genbank gene 132290 133873 . + . ID=gene-D8M19_03935;Name=D8M19_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03935 RBLY01000003.1 Protein Homology CDS 132290 133873 . + 0 ID=cds-RUP94209.1;Parent=gene-D8M19_03935;Dbxref=NCBI_GP:RUP94209.1;Name=RUP94209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120321.1;locus_tag=D8M19_03935;product=serine/threonine-protein phosphatase;protein_id=RUP94209.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 133874 135295 . + . ID=gene-D8M19_03940;Name=D8M19_03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03940;pseudo=true RBLY01000003.1 Protein Homology CDS 133874 135295 . + 0 ID=cds-D8M19_03940;Parent=gene-D8M19_03940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120322.1;locus_tag=D8M19_03940;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 135370 136797 . + . ID=gene-D8M19_03945;Name=D8M19_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03945 RBLY01000003.1 Protein Homology CDS 135370 136797 . + 0 ID=cds-RUP94210.1;Parent=gene-D8M19_03945;Dbxref=NCBI_GP:RUP94210.1;Name=RUP94210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846619.1;locus_tag=D8M19_03945;product=penicillin-binding protein 2;protein_id=RUP94210.1;transl_table=11 RBLY01000003.1 Genbank gene 136801 138630 . + . ID=gene-D8M19_03950;Name=D8M19_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03950 RBLY01000003.1 Protein Homology CDS 136801 138630 . + 0 ID=cds-RUP94211.1;Parent=gene-D8M19_03950;Dbxref=NCBI_GP:RUP94211.1;Name=RUP94211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846620.1;locus_tag=D8M19_03950;product=serine/threonine protein kinase;protein_id=RUP94211.1;transl_table=11 RBLY01000003.1 Genbank gene 138633 140696 . + . ID=gene-D8M19_03955;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=D8M19_03955 RBLY01000003.1 Protein Homology CDS 138633 140696 . + 0 ID=cds-RUP94212.1;Parent=gene-D8M19_03955;Dbxref=NCBI_GP:RUP94212.1;Name=RUP94212.1;gbkey=CDS;gene=pknB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120324.1;locus_tag=D8M19_03955;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=RUP94212.1;transl_table=11 RBLY01000003.1 Genbank gene 140813 141085 . + . ID=gene-D8M19_03960;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=D8M19_03960 RBLY01000003.1 Protein Homology CDS 140813 141085 . + 0 ID=cds-RUP94213.1;Parent=gene-D8M19_03960;Dbxref=NCBI_GP:RUP94213.1;Name=RUP94213.1;gbkey=CDS;gene=crgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120325.1;locus_tag=D8M19_03960;product=cell division protein CrgA;protein_id=RUP94213.1;transl_table=11 RBLY01000003.1 Genbank gene 141262 141645 . + . ID=gene-D8M19_03965;Name=D8M19_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03965 RBLY01000003.1 GeneMarkS+ CDS 141262 141645 . + 0 ID=cds-RUP94214.1;Parent=gene-D8M19_03965;Dbxref=NCBI_GP:RUP94214.1;Name=RUP94214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_03965;product=hypothetical protein;protein_id=RUP94214.1;transl_table=11 RBLY01000003.1 Genbank gene 141715 142239 . + . ID=gene-D8M19_03970;Name=D8M19_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03970 RBLY01000003.1 Protein Homology CDS 141715 142239 . + 0 ID=cds-RUP94215.1;Parent=gene-D8M19_03970;Dbxref=NCBI_GP:RUP94215.1;Name=RUP94215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120330.1;locus_tag=D8M19_03970;product=RNA polymerase sigma factor;protein_id=RUP94215.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 142239 143351 . + . ID=gene-D8M19_03975;Name=D8M19_03975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_03975;pseudo=true RBLY01000003.1 Protein Homology CDS 142239 143351 . + 0 ID=cds-D8M19_03975;Parent=gene-D8M19_03975;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528059.1;locus_tag=D8M19_03975;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 144072 144602 . - . ID=gene-D8M19_03980;Name=D8M19_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03980 RBLY01000003.1 Protein Homology CDS 144072 144602 . - 0 ID=cds-RUP94216.1;Parent=gene-D8M19_03980;Dbxref=NCBI_GP:RUP94216.1;Name=RUP94216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005292634.1;locus_tag=D8M19_03980;product=peptidylprolyl isomerase;protein_id=RUP94216.1;transl_table=11 RBLY01000003.1 Genbank gene 144601 145869 . + . ID=gene-D8M19_03985;Name=D8M19_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03985 RBLY01000003.1 Protein Homology CDS 144601 145869 . + 0 ID=cds-RUP94217.1;Parent=gene-D8M19_03985;Dbxref=NCBI_GP:RUP94217.1;Name=RUP94217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03631.13;locus_tag=D8M19_03985;product=YihY/virulence factor BrkB family protein;protein_id=RUP94217.1;transl_table=11 RBLY01000003.1 Genbank gene 145952 148249 . - . ID=gene-D8M19_03990;Name=D8M19_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03990 RBLY01000003.1 Protein Homology CDS 145952 148249 . - 0 ID=cds-RUP94218.1;Parent=gene-D8M19_03990;Dbxref=NCBI_GP:RUP94218.1;Name=RUP94218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120334.1;locus_tag=D8M19_03990;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=RUP94218.1;transl_table=11 RBLY01000003.1 Genbank gene 148377 149345 . - . ID=gene-D8M19_03995;Name=D8M19_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_03995 RBLY01000003.1 Protein Homology CDS 148377 149345 . - 0 ID=cds-RUP94219.1;Parent=gene-D8M19_03995;Dbxref=NCBI_GP:RUP94219.1;Name=RUP94219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120335.1;locus_tag=D8M19_03995;product=methylenetetrahydrofolate reductase;protein_id=RUP94219.1;transl_table=11 RBLY01000003.1 Genbank gene 149308 149616 . - . ID=gene-D8M19_04000;Name=D8M19_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04000 RBLY01000003.1 GeneMarkS+ CDS 149308 149616 . - 0 ID=cds-RUP94220.1;Parent=gene-D8M19_04000;Dbxref=NCBI_GP:RUP94220.1;Name=RUP94220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04000;product=hypothetical protein;protein_id=RUP94220.1;transl_table=11 RBLY01000003.1 Genbank gene 149678 150643 . + . ID=gene-D8M19_04005;Name=D8M19_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04005 RBLY01000003.1 GeneMarkS+ CDS 149678 150643 . + 0 ID=cds-RUP94221.1;Parent=gene-D8M19_04005;Dbxref=NCBI_GP:RUP94221.1;Name=RUP94221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04005;product=hypothetical protein;protein_id=RUP94221.1;transl_table=11 RBLY01000003.1 Genbank gene 150922 151134 . + . ID=gene-D8M19_04010;Name=D8M19_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04010 RBLY01000003.1 Protein Homology CDS 150922 151134 . + 0 ID=cds-RUP94366.1;Parent=gene-D8M19_04010;Dbxref=NCBI_GP:RUP94366.1;Name=RUP94366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120338.1;locus_tag=D8M19_04010;product=hypothetical protein;protein_id=RUP94366.1;transl_table=11 RBLY01000003.1 Genbank gene 151144 152286 . + . ID=gene-D8M19_04015;Name=D8M19_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04015 RBLY01000003.1 Protein Homology CDS 151144 152286 . + 0 ID=cds-RUP94222.1;Parent=gene-D8M19_04015;Dbxref=NCBI_GP:RUP94222.1;Name=RUP94222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120339.1;locus_tag=D8M19_04015;product=glycosyltransferase family 1 protein;protein_id=RUP94222.1;transl_table=11 RBLY01000003.1 Genbank gene 152322 153167 . - . ID=gene-D8M19_04020;Name=D8M19_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04020 RBLY01000003.1 Protein Homology CDS 152322 153167 . - 0 ID=cds-RUP94223.1;Parent=gene-D8M19_04020;Dbxref=NCBI_GP:RUP94223.1;Name=RUP94223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388393.1;locus_tag=D8M19_04020;product=DUF4143 domain-containing protein;protein_id=RUP94223.1;transl_table=11 RBLY01000003.1 Genbank gene 153246 153548 . - . ID=gene-D8M19_04025;Name=D8M19_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04025 RBLY01000003.1 GeneMarkS+ CDS 153246 153548 . - 0 ID=cds-RUP94224.1;Parent=gene-D8M19_04025;Dbxref=NCBI_GP:RUP94224.1;Name=RUP94224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04025;product=hypothetical protein;protein_id=RUP94224.1;transl_table=11 RBLY01000003.1 Genbank gene 154477 154782 . - . ID=gene-D8M19_04030;Name=D8M19_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04030 RBLY01000003.1 GeneMarkS+ CDS 154477 154782 . - 0 ID=cds-RUP94225.1;Parent=gene-D8M19_04030;Dbxref=NCBI_GP:RUP94225.1;Name=RUP94225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04030;product=hypothetical protein;protein_id=RUP94225.1;transl_table=11 RBLY01000003.1 Genbank gene 155192 155878 . - . ID=gene-D8M19_04035;Name=D8M19_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04035 RBLY01000003.1 Protein Homology CDS 155192 155878 . - 0 ID=cds-RUP94226.1;Parent=gene-D8M19_04035;Dbxref=NCBI_GP:RUP94226.1;Name=RUP94226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602151.1;locus_tag=D8M19_04035;product=DUF305 domain-containing protein;protein_id=RUP94226.1;transl_table=11 RBLY01000003.1 Genbank gene 155927 157951 . - . ID=gene-D8M19_04040;Name=D8M19_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04040 RBLY01000003.1 Protein Homology CDS 155927 157951 . - 0 ID=cds-RUP94367.1;Parent=gene-D8M19_04040;Dbxref=NCBI_GP:RUP94367.1;Name=RUP94367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009408064.1;locus_tag=D8M19_04040;product=copper-translocating P-type ATPase;protein_id=RUP94367.1;transl_table=11 RBLY01000003.1 Genbank gene 157862 158101 . + . ID=gene-D8M19_04045;Name=D8M19_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04045 RBLY01000003.1 Protein Homology CDS 157862 158101 . + 0 ID=cds-RUP94368.1;Parent=gene-D8M19_04045;Dbxref=NCBI_GP:RUP94368.1;Name=RUP94368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849908.1;locus_tag=D8M19_04045;product=hypothetical protein;protein_id=RUP94368.1;transl_table=11 RBLY01000003.1 Genbank gene 158108 158434 . - . ID=gene-D8M19_04050;Name=D8M19_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04050 RBLY01000003.1 Protein Homology CDS 158108 158434 . - 0 ID=cds-RUP94227.1;Parent=gene-D8M19_04050;Dbxref=NCBI_GP:RUP94227.1;Name=RUP94227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010933983.1;locus_tag=D8M19_04050;product=copper chaperone;protein_id=RUP94227.1;transl_table=11 RBLY01000003.1 Genbank gene 158549 159676 . - . ID=gene-D8M19_04055;Name=D8M19_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04055 RBLY01000003.1 Protein Homology CDS 158549 159676 . - 0 ID=cds-RUP94228.1;Parent=gene-D8M19_04055;Dbxref=NCBI_GP:RUP94228.1;Name=RUP94228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840783.1;locus_tag=D8M19_04055;product=sensor histidine kinase;protein_id=RUP94228.1;transl_table=11 RBLY01000003.1 Genbank gene 159673 160395 . - . ID=gene-D8M19_04060;Name=D8M19_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04060 RBLY01000003.1 Protein Homology CDS 159673 160395 . - 0 ID=cds-RUP94369.1;Parent=gene-D8M19_04060;Dbxref=NCBI_GP:RUP94369.1;Name=RUP94369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602156.1;locus_tag=D8M19_04060;product=DNA-binding response regulator;protein_id=RUP94369.1;transl_table=11 RBLY01000003.1 Genbank gene 160800 161375 . + . ID=gene-D8M19_04065;Name=D8M19_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04065 RBLY01000003.1 Protein Homology CDS 160800 161375 . + 0 ID=cds-RUP94229.1;Parent=gene-D8M19_04065;Dbxref=NCBI_GP:RUP94229.1;Name=RUP94229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006284600.1;locus_tag=D8M19_04065;product=hypothetical protein;protein_id=RUP94229.1;transl_table=11 RBLY01000003.1 Genbank gene 161447 162928 . + . ID=gene-D8M19_04070;Name=D8M19_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04070 RBLY01000003.1 Protein Homology CDS 161447 162928 . + 0 ID=cds-RUP94230.1;Parent=gene-D8M19_04070;Dbxref=NCBI_GP:RUP94230.1;Name=RUP94230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_602158.1;locus_tag=D8M19_04070;product=multicopper oxidase family protein;protein_id=RUP94230.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 163017 163964 . + . ID=gene-D8M19_04075;Name=D8M19_04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04075;pseudo=true RBLY01000003.1 Protein Homology CDS 163017 163964 . + 0 ID=cds-D8M19_04075;Parent=gene-D8M19_04075;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013170012.1;locus_tag=D8M19_04075;product=IS3 family transposase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 164303 164911 . - . ID=gene-D8M19_04080;Name=D8M19_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04080 RBLY01000003.1 Protein Homology CDS 164303 164911 . - 0 ID=cds-RUP94231.1;Parent=gene-D8M19_04080;Dbxref=NCBI_GP:RUP94231.1;Name=RUP94231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821861.1;locus_tag=D8M19_04080;product=recombinase family protein;protein_id=RUP94231.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 164998 165135 . + . ID=gene-D8M19_04085;Name=D8M19_04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04085;pseudo=true RBLY01000003.1 Protein Homology CDS 164998 165135 . + 0 ID=cds-D8M19_04085;Parent=gene-D8M19_04085;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002546817.1;locus_tag=D8M19_04085;product=cadmium transporter;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 165304 165843 . + . ID=gene-D8M19_04090;Name=D8M19_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04090 RBLY01000003.1 Protein Homology CDS 165304 165843 . + 0 ID=cds-RUP94232.1;Parent=gene-D8M19_04090;Dbxref=NCBI_GP:RUP94232.1;Name=RUP94232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458765.1;locus_tag=D8M19_04090;product=DinB family protein;protein_id=RUP94232.1;transl_table=11 RBLY01000003.1 Genbank gene 165977 166885 . - . ID=gene-D8M19_04095;Name=D8M19_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04095 RBLY01000003.1 Protein Homology CDS 165977 166885 . - 0 ID=cds-RUP94233.1;Parent=gene-D8M19_04095;Dbxref=NCBI_GP:RUP94233.1;Name=RUP94233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018295729.1;locus_tag=D8M19_04095;product=cation transporter;protein_id=RUP94233.1;transl_table=11 RBLY01000003.1 Genbank gene 167008 168048 . - . ID=gene-D8M19_04100;Name=D8M19_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04100 RBLY01000003.1 Protein Homology CDS 167008 168048 . - 0 ID=cds-RUP94234.1;Parent=gene-D8M19_04100;Dbxref=NCBI_GP:RUP94234.1;Name=RUP94234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841230.1;locus_tag=D8M19_04100;product=SURF1 family protein;protein_id=RUP94234.1;transl_table=11 RBLY01000003.1 Genbank gene 168112 170085 . - . ID=gene-D8M19_04105;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=D8M19_04105 RBLY01000003.1 Protein Homology CDS 168112 170085 . - 0 ID=cds-RUP94235.1;Parent=gene-D8M19_04105;Dbxref=NCBI_GP:RUP94235.1;Name=RUP94235.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860212.1;locus_tag=D8M19_04105;product=cadmium-translocating P-type ATPase;protein_id=RUP94235.1;transl_table=11 RBLY01000003.1 Genbank gene 170082 170447 . - . ID=gene-D8M19_04110;Name=D8M19_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04110 RBLY01000003.1 Protein Homology CDS 170082 170447 . - 0 ID=cds-RUP94236.1;Parent=gene-D8M19_04110;Dbxref=NCBI_GP:RUP94236.1;Name=RUP94236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847982.1;locus_tag=D8M19_04110;product=ArsR family transcriptional regulator;protein_id=RUP94236.1;transl_table=11 RBLY01000003.1 Genbank gene 170624 171208 . - . ID=gene-D8M19_04115;Name=D8M19_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04115 RBLY01000003.1 Protein Homology CDS 170624 171208 . - 0 ID=cds-RUP94237.1;Parent=gene-D8M19_04115;Dbxref=NCBI_GP:RUP94237.1;Name=RUP94237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860216.1;locus_tag=D8M19_04115;product=copper resistance protein CopC;protein_id=RUP94237.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 171467 173511 . + . ID=gene-D8M19_04120;Name=D8M19_04120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04120;pseudo=true RBLY01000003.1 Protein Homology CDS 171467 173511 . + 0 ID=cds-D8M19_04120;Parent=gene-D8M19_04120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847987.1;locus_tag=D8M19_04120;product=copper resistance protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 173878 174669 . + . ID=gene-D8M19_04125;Name=D8M19_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04125 RBLY01000003.1 Protein Homology CDS 173878 174669 . + 0 ID=cds-RUP94238.1;Parent=gene-D8M19_04125;Dbxref=NCBI_GP:RUP94238.1;Name=RUP94238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006841217.1;locus_tag=D8M19_04125;product=M23 family metallopeptidase;protein_id=RUP94238.1;transl_table=11 RBLY01000003.1 Genbank gene 174813 175142 . + . ID=gene-D8M19_04130;Name=D8M19_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04130 RBLY01000003.1 Protein Homology CDS 174813 175142 . + 0 ID=cds-RUP94239.1;Parent=gene-D8M19_04130;Dbxref=NCBI_GP:RUP94239.1;Name=RUP94239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402255.1;locus_tag=D8M19_04130;product=ArsR family transcriptional regulator;protein_id=RUP94239.1;transl_table=11 RBLY01000003.1 Genbank gene 175247 175954 . + . ID=gene-D8M19_04135;Name=D8M19_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04135 RBLY01000003.1 Protein Homology CDS 175247 175954 . + 0 ID=cds-RUP94240.1;Parent=gene-D8M19_04135;Dbxref=NCBI_GP:RUP94240.1;Name=RUP94240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015453104.1;locus_tag=D8M19_04135;product=disulfide bond formation protein DsbA;protein_id=RUP94240.1;transl_table=11 RBLY01000003.1 Genbank gene 175964 176614 . + . ID=gene-D8M19_04140;Name=D8M19_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04140 RBLY01000003.1 Protein Homology CDS 175964 176614 . + 0 ID=cds-RUP94241.1;Parent=gene-D8M19_04140;Dbxref=NCBI_GP:RUP94241.1;Name=RUP94241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770482.1;locus_tag=D8M19_04140;product=vitamin K epoxide reductase family protein;protein_id=RUP94241.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 176864 177514 . - . ID=gene-D8M19_04145;Name=D8M19_04145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04145;pseudo=true RBLY01000003.1 Protein Homology CDS 176864 177514 . - 0 ID=cds-D8M19_04145;Parent=gene-D8M19_04145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_099156038.1;locus_tag=D8M19_04145;product=IS6 family transposase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 178029 178388 . + . ID=gene-D8M19_04150;Name=D8M19_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04150 RBLY01000003.1 Protein Homology CDS 178029 178388 . + 0 ID=cds-RUP94242.1;Parent=gene-D8M19_04150;Dbxref=NCBI_GP:RUP94242.1;Name=RUP94242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839590.1;locus_tag=D8M19_04150;product=ArsR family transcriptional regulator;protein_id=RUP94242.1;transl_table=11 RBLY01000003.1 Genbank gene 178389 178985 . + . ID=gene-D8M19_04155;Name=D8M19_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04155 RBLY01000003.1 Protein Homology CDS 178389 178985 . + 0 ID=cds-RUP94243.1;Parent=gene-D8M19_04155;Dbxref=NCBI_GP:RUP94243.1;Name=RUP94243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600135.1;locus_tag=D8M19_04155;product=cadmium transporter;protein_id=RUP94243.1;transl_table=11 RBLY01000003.1 Genbank gene 179574 179891 . - . ID=gene-D8M19_04160;Name=D8M19_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04160 RBLY01000003.1 Protein Homology CDS 179574 179891 . - 0 ID=cds-RUP94244.1;Parent=gene-D8M19_04160;Dbxref=NCBI_GP:RUP94244.1;Name=RUP94244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_630707.1;locus_tag=D8M19_04160;product=hypothetical protein;protein_id=RUP94244.1;transl_table=11 RBLY01000003.1 Genbank gene 180138 180210 . - . ID=gene-D8M19_04165;Name=D8M19_04165;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_04165 RBLY01000003.1 tRNAscan-SE tRNA 180138 180210 . - . ID=rna-D8M19_04165;Parent=gene-D8M19_04165;anticodon=(pos:complement(180175..180177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_04165;product=tRNA-Ala RBLY01000003.1 tRNAscan-SE exon 180138 180210 . - . ID=exon-D8M19_04165-1;Parent=rna-D8M19_04165;anticodon=(pos:complement(180175..180177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_04165;product=tRNA-Ala RBLY01000003.1 Genbank gene 180224 180297 . - . ID=gene-D8M19_04170;Name=D8M19_04170;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_04170 RBLY01000003.1 tRNAscan-SE tRNA 180224 180297 . - . ID=rna-D8M19_04170;Parent=gene-D8M19_04170;anticodon=(pos:complement(180261..180263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_04170;product=tRNA-Ile RBLY01000003.1 tRNAscan-SE exon 180224 180297 . - . ID=exon-D8M19_04170-1;Parent=rna-D8M19_04170;anticodon=(pos:complement(180261..180263));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_04170;product=tRNA-Ile RBLY01000003.1 Genbank gene 180377 180727 . - . ID=gene-D8M19_04175;Name=D8M19_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04175 RBLY01000003.1 Protein Homology CDS 180377 180727 . - 0 ID=cds-RUP94245.1;Parent=gene-D8M19_04175;Dbxref=NCBI_GP:RUP94245.1;Name=RUP94245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120679.1;locus_tag=D8M19_04175;product=DUF3566 domain-containing protein;protein_id=RUP94245.1;transl_table=11 RBLY01000003.1 Genbank gene 180732 183332 . - . ID=gene-D8M19_04180;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=D8M19_04180 RBLY01000003.1 Protein Homology CDS 180732 183332 . - 0 ID=cds-RUP94246.1;Parent=gene-D8M19_04180;Dbxref=NCBI_GP:RUP94246.1;Name=RUP94246.1;gbkey=CDS;gene=gyrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015649933.1;locus_tag=D8M19_04180;product=DNA gyrase subunit A;protein_id=RUP94246.1;transl_table=11 RBLY01000003.1 Genbank gene 183700 185358 . + . ID=gene-D8M19_04185;Name=D8M19_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04185 RBLY01000003.1 Protein Homology CDS 183700 185358 . + 0 ID=cds-RUP94247.1;Parent=gene-D8M19_04185;Dbxref=NCBI_GP:RUP94247.1;Name=RUP94247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04326.12;locus_tag=D8M19_04185;product=hypothetical protein;protein_id=RUP94247.1;transl_table=11 RBLY01000003.1 Genbank gene 185380 186270 . - . ID=gene-D8M19_04190;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=D8M19_04190 RBLY01000003.1 Protein Homology CDS 185380 186270 . - 0 ID=cds-RUP94248.1;Parent=gene-D8M19_04190;Dbxref=NCBI_GP:RUP94248.1;Name=RUP94248.1;gbkey=CDS;gene=pdxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120676.1;locus_tag=D8M19_04190;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=RUP94248.1;transl_table=11 RBLY01000003.1 Genbank gene 186361 188388 . - . ID=gene-D8M19_04195;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=D8M19_04195 RBLY01000003.1 Protein Homology CDS 186361 188388 . - 0 ID=cds-RUP94249.1;Parent=gene-D8M19_04195;Dbxref=NCBI_GP:RUP94249.1;Name=RUP94249.1;gbkey=CDS;gene=gyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599257.1;locus_tag=D8M19_04195;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=RUP94249.1;transl_table=11 RBLY01000003.1 Genbank gene 188522 189199 . - . ID=gene-D8M19_04200;Name=D8M19_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04200 RBLY01000003.1 Protein Homology CDS 188522 189199 . - 0 ID=cds-RUP94250.1;Parent=gene-D8M19_04200;Dbxref=NCBI_GP:RUP94250.1;Name=RUP94250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006061637.1;locus_tag=D8M19_04200;product=DUF721 domain-containing protein;protein_id=RUP94250.1;transl_table=11 RBLY01000003.1 Genbank gene 189196 190530 . - . ID=gene-D8M19_04205;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=D8M19_04205 RBLY01000003.1 Protein Homology CDS 189196 190530 . - 0 ID=cds-RUP94251.1;Parent=gene-D8M19_04205;Dbxref=NCBI_GP:RUP94251.1;Name=RUP94251.1;gbkey=CDS;gene=recF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326880.1;locus_tag=D8M19_04205;product=DNA replication/repair protein RecF;protein_id=RUP94251.1;transl_table=11 RBLY01000003.1 Genbank gene 190530 191717 . - . ID=gene-D8M19_04210;Name=D8M19_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04210 RBLY01000003.1 Protein Homology CDS 190530 191717 . - 0 ID=cds-RUP94252.1;Parent=gene-D8M19_04210;Dbxref=NCBI_GP:RUP94252.1;Name=RUP94252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276004.1;locus_tag=D8M19_04210;product=DNA polymerase III subunit beta;protein_id=RUP94252.1;transl_table=11 RBLY01000003.1 Genbank gene 192424 194172 . - . ID=gene-D8M19_04215;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=D8M19_04215 RBLY01000003.1 Protein Homology CDS 192424 194172 . - 0 ID=cds-RUP94253.1;Parent=gene-D8M19_04215;Dbxref=NCBI_GP:RUP94253.1;Name=RUP94253.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120671.1;locus_tag=D8M19_04215;product=chromosomal replication initiator protein DnaA;protein_id=RUP94253.1;transl_table=11 RBLY01000003.1 Genbank gene 194998 195141 . + . ID=gene-D8M19_04220;Name=D8M19_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04220 RBLY01000003.1 Protein Homology CDS 194998 195141 . + 0 ID=cds-RUP94254.1;Parent=gene-D8M19_04220;Dbxref=NCBI_GP:RUP94254.1;Name=RUP94254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003890928.1;locus_tag=D8M19_04220;product=50S ribosomal protein L34;protein_id=RUP94254.1;transl_table=11 RBLY01000003.1 Genbank gene 195145 195567 . + . ID=gene-D8M19_04225;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=D8M19_04225 RBLY01000003.1 Protein Homology CDS 195145 195567 . + 0 ID=cds-RUP94255.1;Parent=gene-D8M19_04225;Dbxref=NCBI_GP:RUP94255.1;Name=RUP94255.1;gbkey=CDS;gene=rnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118146.1;locus_tag=D8M19_04225;product=ribonuclease P protein component;protein_id=RUP94255.1;transl_table=11 RBLY01000003.1 Genbank gene 195564 195869 . + . ID=gene-D8M19_04230;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=D8M19_04230 RBLY01000003.1 Protein Homology CDS 195564 195869 . + 0 ID=cds-RUP94256.1;Parent=gene-D8M19_04230;Dbxref=NCBI_GP:RUP94256.1;Name=RUP94256.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120669.1;locus_tag=D8M19_04230;product=membrane protein insertion efficiency factor YidD;protein_id=RUP94256.1;transl_table=11 RBLY01000003.1 Genbank gene 195889 196896 . + . ID=gene-D8M19_04235;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D8M19_04235 RBLY01000003.1 Protein Homology CDS 195889 196896 . + 0 ID=cds-RUP94257.1;Parent=gene-D8M19_04235;Dbxref=NCBI_GP:RUP94257.1;Name=RUP94257.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530700.1;locus_tag=D8M19_04235;product=membrane protein insertase YidC;protein_id=RUP94257.1;transl_table=11 RBLY01000003.1 Genbank gene 196896 197498 . + . ID=gene-D8M19_04240;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=D8M19_04240 RBLY01000003.1 Protein Homology CDS 196896 197498 . + 0 ID=cds-RUP94258.1;Parent=gene-D8M19_04240;Dbxref=NCBI_GP:RUP94258.1;Name=RUP94258.1;gbkey=CDS;gene=rsmG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120667.1;locus_tag=D8M19_04240;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=RUP94258.1;transl_table=11 RBLY01000003.1 Genbank gene 197509 198447 . + . ID=gene-D8M19_04245;Name=D8M19_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04245 RBLY01000003.1 Protein Homology CDS 197509 198447 . + 0 ID=cds-RUP94259.1;Parent=gene-D8M19_04245;Dbxref=NCBI_GP:RUP94259.1;Name=RUP94259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530704.1;locus_tag=D8M19_04245;product=ParA family protein;protein_id=RUP94259.1;transl_table=11 RBLY01000003.1 Genbank gene 198464 199690 . + . ID=gene-D8M19_04250;Name=D8M19_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04250 RBLY01000003.1 Protein Homology CDS 198464 199690 . + 0 ID=cds-RUP94260.1;Parent=gene-D8M19_04250;Dbxref=NCBI_GP:RUP94260.1;Name=RUP94260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120665.1;locus_tag=D8M19_04250;product=ParB/RepB/Spo0J family partition protein;protein_id=RUP94260.1;transl_table=11 RBLY01000003.1 Genbank gene 199911 201095 . - . ID=gene-D8M19_04255;Name=D8M19_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04255 RBLY01000003.1 Protein Homology CDS 199911 201095 . - 0 ID=cds-RUP94261.1;Parent=gene-D8M19_04255;Dbxref=NCBI_GP:RUP94261.1;Name=RUP94261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188064.1;locus_tag=D8M19_04255;product=N-acetylmuramoyl-L-alanine amidase;protein_id=RUP94261.1;transl_table=11 RBLY01000003.1 Genbank gene 201245 201568 . - . ID=gene-D8M19_04260;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D8M19_04260 RBLY01000003.1 Protein Homology CDS 201245 201568 . - 0 ID=cds-RUP94262.1;Parent=gene-D8M19_04260;Dbxref=NCBI_GP:RUP94262.1;Name=RUP94262.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120663.1;locus_tag=D8M19_04260;product=thioredoxin;protein_id=RUP94262.1;transl_table=11 RBLY01000003.1 Genbank gene 201754 202683 . - . ID=gene-D8M19_04265;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=D8M19_04265 RBLY01000003.1 Protein Homology CDS 201754 202683 . - 0 ID=cds-RUP94263.1;Parent=gene-D8M19_04265;Dbxref=NCBI_GP:RUP94263.1;Name=RUP94263.1;gbkey=CDS;gene=trxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847020.1;locus_tag=D8M19_04265;product=thioredoxin-disulfide reductase;protein_id=RUP94263.1;transl_table=11 RBLY01000003.1 Genbank gene 202811 203374 . - . ID=gene-D8M19_04270;Name=D8M19_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04270 RBLY01000003.1 Protein Homology CDS 202811 203374 . - 0 ID=cds-RUP94264.1;Parent=gene-D8M19_04270;Dbxref=NCBI_GP:RUP94264.1;Name=RUP94264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326897.1;locus_tag=D8M19_04270;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP94264.1;transl_table=11 RBLY01000003.1 Genbank gene 203513 207196 . - . ID=gene-D8M19_04275;Name=D8M19_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04275 RBLY01000003.1 Protein Homology CDS 203513 207196 . - 0 ID=cds-RUP94265.1;Parent=gene-D8M19_04275;Dbxref=NCBI_GP:RUP94265.1;Name=RUP94265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120660.1;locus_tag=D8M19_04275;product=murein biosynthesis protein MurJ;protein_id=RUP94265.1;transl_table=11 RBLY01000003.1 Genbank gene 207212 209563 . - . ID=gene-D8M19_04280;Name=D8M19_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04280 RBLY01000003.1 GeneMarkS+ CDS 207212 209563 . - 0 ID=cds-RUP94266.1;Parent=gene-D8M19_04280;Dbxref=NCBI_GP:RUP94266.1;Name=RUP94266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04280;product=hypothetical protein;protein_id=RUP94266.1;transl_table=11 RBLY01000003.1 Genbank gene 209560 210420 . - . ID=gene-D8M19_04285;Name=D8M19_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04285 RBLY01000003.1 Protein Homology CDS 209560 210420 . - 0 ID=cds-RUP94267.1;Parent=gene-D8M19_04285;Dbxref=NCBI_GP:RUP94267.1;Name=RUP94267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120658.1;locus_tag=D8M19_04285;product=NUDIX hydrolase;protein_id=RUP94267.1;transl_table=11 RBLY01000003.1 Genbank gene 210449 211909 . + . ID=gene-D8M19_04290;Name=D8M19_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04290 RBLY01000003.1 Protein Homology CDS 210449 211909 . + 0 ID=cds-RUP94268.1;Parent=gene-D8M19_04290;Dbxref=NCBI_GP:RUP94268.1;Name=RUP94268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120657.1;locus_tag=D8M19_04290;product=CCA tRNA nucleotidyltransferase;protein_id=RUP94268.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 211968 212174 . + . ID=gene-D8M19_04295;Name=D8M19_04295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04295;pseudo=true RBLY01000003.1 Protein Homology CDS 211968 212174 . + 0 ID=cds-D8M19_04295;Parent=gene-D8M19_04295;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120656.1;locus_tag=D8M19_04295;product=branched-chain amino acid ABC transporter permease;pseudo=true;transl_table=11 RBLY01000003.1 Genbank pseudogene 212164 212232 . + . ID=gene-D8M19_04300;Name=D8M19_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04300;pseudo=true RBLY01000003.1 Protein Homology CDS 212164 212232 . + 0 ID=cds-D8M19_04300;Parent=gene-D8M19_04300;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120655.1;locus_tag=D8M19_04300;product=branched-chain amino acid ABC transporter permease;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 212252 212560 . - . ID=gene-D8M19_04305;Name=D8M19_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04305 RBLY01000003.1 Protein Homology CDS 212252 212560 . - 0 ID=cds-RUP94269.1;Parent=gene-D8M19_04305;Dbxref=NCBI_GP:RUP94269.1;Name=RUP94269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530730.1;locus_tag=D8M19_04305;product=hypothetical protein;protein_id=RUP94269.1;transl_table=11 RBLY01000003.1 Genbank gene 212633 213004 . - . ID=gene-D8M19_04310;Name=D8M19_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04310 RBLY01000003.1 Protein Homology CDS 212633 213004 . - 0 ID=cds-RUP94270.1;Parent=gene-D8M19_04310;Dbxref=NCBI_GP:RUP94270.1;Name=RUP94270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120653.1;locus_tag=D8M19_04310;product=Rieske (2Fe-2S) protein;protein_id=RUP94270.1;transl_table=11 RBLY01000003.1 Genbank gene 213112 213582 . - . ID=gene-D8M19_04315;Name=D8M19_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04315 RBLY01000003.1 Protein Homology CDS 213112 213582 . - 0 ID=cds-RUP94271.1;Parent=gene-D8M19_04315;Dbxref=NCBI_GP:RUP94271.1;Name=RUP94271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120652.1;locus_tag=D8M19_04315;product=SdpI family protein;protein_id=RUP94271.1;transl_table=11 RBLY01000003.1 Genbank gene 213676 214956 . + . ID=gene-D8M19_04320;Name=D8M19_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04320 RBLY01000003.1 Protein Homology CDS 213676 214956 . + 0 ID=cds-RUP94272.1;Parent=gene-D8M19_04320;Dbxref=NCBI_GP:RUP94272.1;Name=RUP94272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120651.1;locus_tag=D8M19_04320;product=dicarboxylate/amino acid:cation symporter;protein_id=RUP94272.1;transl_table=11 RBLY01000003.1 Genbank gene 215102 215932 . - . ID=gene-D8M19_04325;Name=D8M19_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04325 RBLY01000003.1 Protein Homology CDS 215102 215932 . - 0 ID=cds-RUP94273.1;Parent=gene-D8M19_04325;Dbxref=NCBI_GP:RUP94273.1;Name=RUP94273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120650.1;locus_tag=D8M19_04325;product=tryptophan synthase subunit alpha;protein_id=RUP94273.1;transl_table=11 RBLY01000003.1 Genbank gene 215935 217203 . - . ID=gene-D8M19_04330;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=D8M19_04330 RBLY01000003.1 Protein Homology CDS 215935 217203 . - 0 ID=cds-RUP94274.1;Parent=gene-D8M19_04330;Dbxref=NCBI_GP:RUP94274.1;Name=RUP94274.1;gbkey=CDS;gene=trpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120649.1;locus_tag=D8M19_04330;product=tryptophan synthase subunit beta;protein_id=RUP94274.1;transl_table=11 RBLY01000003.1 Genbank gene 217212 218729 . - . ID=gene-D8M19_04335;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=D8M19_04335 RBLY01000003.1 Protein Homology CDS 217212 218729 . - 0 ID=cds-RUP94275.1;Parent=gene-D8M19_04335;Dbxref=NCBI_GP:RUP94275.1;Name=RUP94275.1;gbkey=CDS;gene=trpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120648.1;locus_tag=D8M19_04335;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=RUP94275.1;transl_table=11 RBLY01000003.1 Genbank gene 218719 219729 . - . ID=gene-D8M19_04340;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=D8M19_04340 RBLY01000003.1 Protein Homology CDS 218719 219729 . - 0 ID=cds-RUP94370.1;Parent=gene-D8M19_04340;Dbxref=NCBI_GP:RUP94370.1;Name=RUP94370.1;gbkey=CDS;gene=trpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010935786.1;locus_tag=D8M19_04340;product=anthranilate phosphoribosyltransferase;protein_id=RUP94370.1;transl_table=11 RBLY01000003.1 Genbank gene 219849 220484 . - . ID=gene-D8M19_04345;Name=D8M19_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04345 RBLY01000003.1 Protein Homology CDS 219849 220484 . - 0 ID=cds-RUP94371.1;Parent=gene-D8M19_04345;Dbxref=NCBI_GP:RUP94371.1;Name=RUP94371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120646.1;locus_tag=D8M19_04345;product=anthranilate synthase component II;protein_id=RUP94371.1;transl_table=11 RBLY01000003.1 Genbank gene 220502 222109 . - . ID=gene-D8M19_04350;Name=D8M19_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04350 RBLY01000003.1 Protein Homology CDS 220502 222109 . - 0 ID=cds-RUP94276.1;Parent=gene-D8M19_04350;Dbxref=NCBI_GP:RUP94276.1;Name=RUP94276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120645.1;locus_tag=D8M19_04350;product=anthranilate synthase component 1;protein_id=RUP94276.1;transl_table=11 RBLY01000003.1 Genbank gene 222219 223424 . - . ID=gene-D8M19_04355;Name=D8M19_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04355 RBLY01000003.1 Protein Homology CDS 222219 223424 . - 0 ID=cds-RUP94277.1;Parent=gene-D8M19_04355;Dbxref=NCBI_GP:RUP94277.1;Name=RUP94277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120644.1;locus_tag=D8M19_04355;product=imidazolonepropionase;protein_id=RUP94277.1;transl_table=11 RBLY01000003.1 Genbank gene 223621 225207 . - . ID=gene-D8M19_04360;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=D8M19_04360 RBLY01000003.1 Protein Homology CDS 223621 225207 . - 0 ID=cds-RUP94278.1;Parent=gene-D8M19_04360;Dbxref=NCBI_GP:RUP94278.1;Name=RUP94278.1;gbkey=CDS;gene=hutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282317.1;locus_tag=D8M19_04360;product=histidine ammonia-lyase;protein_id=RUP94278.1;transl_table=11 RBLY01000003.1 Genbank gene 225496 226452 . + . ID=gene-D8M19_04365;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=D8M19_04365 RBLY01000003.1 Protein Homology CDS 225496 226452 . + 0 ID=cds-RUP94279.1;Parent=gene-D8M19_04365;Dbxref=NCBI_GP:RUP94279.1;Name=RUP94279.1;gbkey=CDS;gene=hutG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018302.1;locus_tag=D8M19_04365;product=formimidoylglutamase;protein_id=RUP94279.1;transl_table=11 RBLY01000003.1 Genbank gene 226510 227877 . + . ID=gene-D8M19_04370;Name=D8M19_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04370 RBLY01000003.1 Protein Homology CDS 226510 227877 . + 0 ID=cds-RUP94280.1;Parent=gene-D8M19_04370;Dbxref=NCBI_GP:RUP94280.1;Name=RUP94280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005294311.1;locus_tag=D8M19_04370;product=TRAP transporter large permease subunit;protein_id=RUP94280.1;transl_table=11 RBLY01000003.1 Genbank gene 227908 229353 . - . ID=gene-D8M19_04375;Name=D8M19_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04375 RBLY01000003.1 Protein Homology CDS 227908 229353 . - 0 ID=cds-RUP94281.1;Parent=gene-D8M19_04375;Dbxref=NCBI_GP:RUP94281.1;Name=RUP94281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012360740.1;locus_tag=D8M19_04375;product=sodium:alanine symporter family protein;protein_id=RUP94281.1;transl_table=11 RBLY01000003.1 Genbank gene 229453 230379 . + . ID=gene-D8M19_04380;Name=D8M19_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04380 RBLY01000003.1 Protein Homology CDS 229453 230379 . + 0 ID=cds-RUP94282.1;Parent=gene-D8M19_04380;Dbxref=NCBI_GP:RUP94282.1;Name=RUP94282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120639.1;locus_tag=D8M19_04380;product=ABC transporter ATP-binding protein;protein_id=RUP94282.1;transl_table=11 RBLY01000003.1 Genbank gene 230376 232043 . + . ID=gene-D8M19_04385;Name=D8M19_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04385 RBLY01000003.1 GeneMarkS+ CDS 230376 232043 . + 0 ID=cds-RUP94283.1;Parent=gene-D8M19_04385;Dbxref=NCBI_GP:RUP94283.1;Name=RUP94283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04385;product=hypothetical protein;protein_id=RUP94283.1;transl_table=11 RBLY01000003.1 Genbank gene 232292 235096 . + . ID=gene-D8M19_04390;Name=D8M19_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04390 RBLY01000003.1 Protein Homology CDS 232292 235096 . + 0 ID=cds-RUP94284.1;Parent=gene-D8M19_04390;Dbxref=NCBI_GP:RUP94284.1;Name=RUP94284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03769;locus_tag=D8M19_04390;product=hypothetical protein;protein_id=RUP94284.1;transl_table=11 RBLY01000003.1 Genbank gene 235258 237942 . + . ID=gene-D8M19_04395;Name=D8M19_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04395 RBLY01000003.1 Protein Homology CDS 235258 237942 . + 0 ID=cds-RUP94285.1;Parent=gene-D8M19_04395;Dbxref=NCBI_GP:RUP94285.1;Name=RUP94285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03769;locus_tag=D8M19_04395;product=hypothetical protein;protein_id=RUP94285.1;transl_table=11 RBLY01000003.1 Genbank gene 237949 239865 . + . ID=gene-D8M19_04400;Name=D8M19_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04400 RBLY01000003.1 Protein Homology CDS 237949 239865 . + 0 ID=cds-RUP94286.1;Parent=gene-D8M19_04400;Dbxref=NCBI_GP:RUP94286.1;Name=RUP94286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120637.1;locus_tag=D8M19_04400;product=cell surface protein;protein_id=RUP94286.1;transl_table=11 RBLY01000003.1 Genbank gene 239978 241492 . + . ID=gene-D8M19_04405;Name=D8M19_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04405 RBLY01000003.1 Protein Homology CDS 239978 241492 . + 0 ID=cds-RUP94372.1;Parent=gene-D8M19_04405;Dbxref=NCBI_GP:RUP94372.1;Name=RUP94372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010186879.1;locus_tag=D8M19_04405;product=anchored repeat ABC transporter%2C substrate-binding protein;protein_id=RUP94372.1;transl_table=11 RBLY01000003.1 Genbank gene 241508 242419 . + . ID=gene-D8M19_04410;Name=D8M19_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04410 RBLY01000003.1 Protein Homology CDS 241508 242419 . + 0 ID=cds-RUP94287.1;Parent=gene-D8M19_04410;Dbxref=NCBI_GP:RUP94287.1;Name=RUP94287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120635.1;locus_tag=D8M19_04410;product=peptidase;protein_id=RUP94287.1;transl_table=11 RBLY01000003.1 Genbank gene 242422 243156 . + . ID=gene-D8M19_04415;Name=D8M19_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04415 RBLY01000003.1 Protein Homology CDS 242422 243156 . + 0 ID=cds-RUP94288.1;Parent=gene-D8M19_04415;Dbxref=NCBI_GP:RUP94288.1;Name=RUP94288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018341189.1;locus_tag=D8M19_04415;product=anchored repeat-type ABC transporter ATP-binding subunit;protein_id=RUP94288.1;transl_table=11 RBLY01000003.1 Genbank gene 243149 244039 . + . ID=gene-D8M19_04420;Name=D8M19_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04420 RBLY01000003.1 Protein Homology CDS 243149 244039 . + 0 ID=cds-RUP94289.1;Parent=gene-D8M19_04420;Dbxref=NCBI_GP:RUP94289.1;Name=RUP94289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120633.1;locus_tag=D8M19_04420;product=anchored repeat-type ABC transporter permease subunit;protein_id=RUP94289.1;transl_table=11 RBLY01000003.1 Genbank gene 244145 245620 . + . ID=gene-D8M19_04425;Name=D8M19_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04425 RBLY01000003.1 GeneMarkS+ CDS 244145 245620 . + 0 ID=cds-RUP94290.1;Parent=gene-D8M19_04425;Dbxref=NCBI_GP:RUP94290.1;Name=RUP94290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04425;product=hypothetical protein;protein_id=RUP94290.1;transl_table=11 RBLY01000003.1 Genbank gene 245923 247146 . + . ID=gene-D8M19_04430;Name=D8M19_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04430 RBLY01000003.1 Protein Homology CDS 245923 247146 . + 0 ID=cds-RUP94291.1;Parent=gene-D8M19_04430;Dbxref=NCBI_GP:RUP94291.1;Name=RUP94291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02661.16;locus_tag=D8M19_04430;product=Fic family protein;protein_id=RUP94291.1;transl_table=11 RBLY01000003.1 Genbank gene 247183 247662 . - . ID=gene-D8M19_04435;Name=D8M19_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04435 RBLY01000003.1 Protein Homology CDS 247183 247662 . - 0 ID=cds-RUP94292.1;Parent=gene-D8M19_04435;Dbxref=NCBI_GP:RUP94292.1;Name=RUP94292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120629.1;locus_tag=D8M19_04435;product=molybdopterin biosynthesis protein MoeB;protein_id=RUP94292.1;transl_table=11 RBLY01000003.1 Genbank gene 247892 249217 . + . ID=gene-D8M19_04440;Name=D8M19_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04440 RBLY01000003.1 Protein Homology CDS 247892 249217 . + 0 ID=cds-RUP94293.1;Parent=gene-D8M19_04440;Dbxref=NCBI_GP:RUP94293.1;Name=RUP94293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280182.1;locus_tag=D8M19_04440;product=NarK/NasA family nitrate transporter;protein_id=RUP94293.1;transl_table=11 RBLY01000003.1 Genbank gene 249254 252988 . + . ID=gene-D8M19_04445;Name=D8M19_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04445 RBLY01000003.1 Protein Homology CDS 249254 252988 . + 0 ID=cds-RUP94294.1;Parent=gene-D8M19_04445;Dbxref=NCBI_GP:RUP94294.1;Name=RUP94294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532030.1;locus_tag=D8M19_04445;product=nitrate reductase subunit alpha;protein_id=RUP94294.1;transl_table=11 RBLY01000003.1 Genbank gene 252988 254580 . + . ID=gene-D8M19_04450;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=D8M19_04450 RBLY01000003.1 Protein Homology CDS 252988 254580 . + 0 ID=cds-RUP94295.1;Parent=gene-D8M19_04450;Dbxref=NCBI_GP:RUP94295.1;Name=RUP94295.1;gbkey=CDS;gene=narH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600414.1;locus_tag=D8M19_04450;product=nitrate reductase subunit beta;protein_id=RUP94295.1;transl_table=11 RBLY01000003.1 Genbank gene 254608 255441 . + . ID=gene-D8M19_04455;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=D8M19_04455 RBLY01000003.1 Protein Homology CDS 254608 255441 . + 0 ID=cds-RUP94296.1;Parent=gene-D8M19_04455;Dbxref=NCBI_GP:RUP94296.1;Name=RUP94296.1;gbkey=CDS;gene=narJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282382.1;locus_tag=D8M19_04455;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=RUP94296.1;transl_table=11 RBLY01000003.1 Genbank gene 255466 256245 . + . ID=gene-D8M19_04460;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=D8M19_04460 RBLY01000003.1 Protein Homology CDS 255466 256245 . + 0 ID=cds-RUP94297.1;Parent=gene-D8M19_04460;Dbxref=NCBI_GP:RUP94297.1;Name=RUP94297.1;gbkey=CDS;gene=narI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280178.1;locus_tag=D8M19_04460;product=respiratory nitrate reductase subunit gamma;protein_id=RUP94297.1;transl_table=11 RBLY01000003.1 Genbank gene 256350 256739 . - . ID=gene-D8M19_04465;Name=D8M19_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04465 RBLY01000003.1 Protein Homology CDS 256350 256739 . - 0 ID=cds-RUP94298.1;Parent=gene-D8M19_04465;Dbxref=NCBI_GP:RUP94298.1;Name=RUP94298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768441.1;locus_tag=D8M19_04465;product=hypothetical protein;protein_id=RUP94298.1;transl_table=11 RBLY01000003.1 Genbank gene 256736 257182 . - . ID=gene-D8M19_04470;Name=D8M19_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04470 RBLY01000003.1 Protein Homology CDS 256736 257182 . - 0 ID=cds-RUP94299.1;Parent=gene-D8M19_04470;Dbxref=NCBI_GP:RUP94299.1;Name=RUP94299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02537.13;locus_tag=D8M19_04470;product=hypothetical protein;protein_id=RUP94299.1;transl_table=11 RBLY01000003.1 Genbank gene 257252 257902 . + . ID=gene-D8M19_04475;Name=D8M19_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04475 RBLY01000003.1 Protein Homology CDS 257252 257902 . + 0 ID=cds-RUP94300.1;Parent=gene-D8M19_04475;Dbxref=NCBI_GP:RUP94300.1;Name=RUP94300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120621.1;locus_tag=D8M19_04475;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=RUP94300.1;transl_table=11 RBLY01000003.1 Genbank gene 257899 258177 . - . ID=gene-D8M19_04480;Name=D8M19_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04480 RBLY01000003.1 GeneMarkS+ CDS 257899 258177 . - 0 ID=cds-RUP94301.1;Parent=gene-D8M19_04480;Dbxref=NCBI_GP:RUP94301.1;Name=RUP94301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04480;product=hypothetical protein;protein_id=RUP94301.1;transl_table=11 RBLY01000003.1 Genbank gene 258674 259696 . - . ID=gene-D8M19_04485;Name=D8M19_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04485 RBLY01000003.1 GeneMarkS+ CDS 258674 259696 . - 0 ID=cds-RUP94302.1;Parent=gene-D8M19_04485;Dbxref=NCBI_GP:RUP94302.1;Name=RUP94302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04485;product=hypothetical protein;protein_id=RUP94302.1;transl_table=11 RBLY01000003.1 Genbank gene 259696 262662 . - . ID=gene-D8M19_04490;Name=D8M19_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04490 RBLY01000003.1 Protein Homology CDS 259696 262662 . - 0 ID=cds-RUP94303.1;Parent=gene-D8M19_04490;Dbxref=NCBI_GP:RUP94303.1;Name=RUP94303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00041.19;locus_tag=D8M19_04490;product=hypothetical protein;protein_id=RUP94303.1;transl_table=11 RBLY01000003.1 Genbank gene 263132 264370 . + . ID=gene-D8M19_04495;Name=D8M19_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04495 RBLY01000003.1 Protein Homology CDS 263132 264370 . + 0 ID=cds-RUP94304.1;Parent=gene-D8M19_04495;Dbxref=NCBI_GP:RUP94304.1;Name=RUP94304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M19_04495;product=two-component sensor histidine kinase;protein_id=RUP94304.1;transl_table=11 RBLY01000003.1 Genbank gene 264370 265044 . + . ID=gene-D8M19_04500;Name=D8M19_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04500 RBLY01000003.1 Protein Homology CDS 264370 265044 . + 0 ID=cds-RUP94305.1;Parent=gene-D8M19_04500;Dbxref=NCBI_GP:RUP94305.1;Name=RUP94305.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00072.22;locus_tag=D8M19_04500;product=DNA-binding response regulator;protein_id=RUP94305.1;transl_table=11 RBLY01000003.1 Genbank gene 265166 265912 . - . ID=gene-D8M19_04505;Name=D8M19_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04505 RBLY01000003.1 GeneMarkS+ CDS 265166 265912 . - 0 ID=cds-RUP94306.1;Parent=gene-D8M19_04505;Dbxref=NCBI_GP:RUP94306.1;Name=RUP94306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04505;product=ABC transporter permease;protein_id=RUP94306.1;transl_table=11 RBLY01000003.1 Genbank gene 265916 266662 . - . ID=gene-D8M19_04510;Name=D8M19_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04510 RBLY01000003.1 GeneMarkS+ CDS 265916 266662 . - 0 ID=cds-RUP94307.1;Parent=gene-D8M19_04510;Dbxref=NCBI_GP:RUP94307.1;Name=RUP94307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04510;product=hypothetical protein;protein_id=RUP94307.1;transl_table=11 RBLY01000003.1 Genbank gene 266652 267548 . - . ID=gene-D8M19_04515;Name=D8M19_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04515 RBLY01000003.1 Protein Homology CDS 266652 267548 . - 0 ID=cds-RUP94308.1;Parent=gene-D8M19_04515;Dbxref=NCBI_GP:RUP94308.1;Name=RUP94308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=D8M19_04515;product=ATP-binding cassette domain-containing protein;protein_id=RUP94308.1;transl_table=11 RBLY01000003.1 Genbank gene 267562 267795 . - . ID=gene-D8M19_04520;Name=D8M19_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04520 RBLY01000003.1 GeneMarkS+ CDS 267562 267795 . - 0 ID=cds-RUP94309.1;Parent=gene-D8M19_04520;Dbxref=NCBI_GP:RUP94309.1;Name=RUP94309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04520;product=hypothetical protein;protein_id=RUP94309.1;transl_table=11 RBLY01000003.1 Genbank gene 268754 269785 . - . ID=gene-D8M19_04525;Name=D8M19_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04525 RBLY01000003.1 Protein Homology CDS 268754 269785 . - 0 ID=cds-RUP94310.1;Parent=gene-D8M19_04525;Dbxref=NCBI_GP:RUP94310.1;Name=RUP94310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120608.1;locus_tag=D8M19_04525;product=LLM class flavin-dependent oxidoreductase;protein_id=RUP94310.1;transl_table=11 RBLY01000003.1 Genbank gene 269893 270228 . - . ID=gene-D8M19_04530;Name=D8M19_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04530 RBLY01000003.1 Protein Homology CDS 269893 270228 . - 0 ID=cds-RUP94311.1;Parent=gene-D8M19_04530;Dbxref=NCBI_GP:RUP94311.1;Name=RUP94311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117432.1;locus_tag=D8M19_04530;product=SdpI family protein;protein_id=RUP94311.1;transl_table=11 RBLY01000003.1 Genbank gene 270593 272029 . + . ID=gene-D8M19_04535;Name=D8M19_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04535 RBLY01000003.1 Protein Homology CDS 270593 272029 . + 0 ID=cds-RUP94373.1;Parent=gene-D8M19_04535;Dbxref=NCBI_GP:RUP94373.1;Name=RUP94373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003939358.1;locus_tag=D8M19_04535;product=aldehyde dehydrogenase family protein;protein_id=RUP94373.1;transl_table=11 RBLY01000003.1 Genbank gene 272026 272292 . - . ID=gene-D8M19_04540;Name=D8M19_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04540 RBLY01000003.1 GeneMarkS+ CDS 272026 272292 . - 0 ID=cds-RUP94312.1;Parent=gene-D8M19_04540;Dbxref=NCBI_GP:RUP94312.1;Name=RUP94312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04540;product=ArsR family transcriptional regulator;protein_id=RUP94312.1;transl_table=11 RBLY01000003.1 Genbank gene 272422 273348 . - . ID=gene-D8M19_04545;Name=D8M19_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04545 RBLY01000003.1 Protein Homology CDS 272422 273348 . - 0 ID=cds-RUP94313.1;Parent=gene-D8M19_04545;Dbxref=NCBI_GP:RUP94313.1;Name=RUP94313.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13749.4;locus_tag=D8M19_04545;product=AAA family ATPase;protein_id=RUP94313.1;transl_table=11 RBLY01000003.1 Genbank gene 273589 275292 . - . ID=gene-D8M19_04550;Name=D8M19_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04550 RBLY01000003.1 Protein Homology CDS 273589 275292 . - 0 ID=cds-RUP94314.1;Parent=gene-D8M19_04550;Dbxref=NCBI_GP:RUP94314.1;Name=RUP94314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188354.1;locus_tag=D8M19_04550;product=alpha-keto acid decarboxylase family protein;protein_id=RUP94314.1;transl_table=11 RBLY01000003.1 Genbank gene 275450 278239 . + . ID=gene-D8M19_04555;Name=D8M19_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04555 RBLY01000003.1 Protein Homology CDS 275450 278239 . + 0 ID=cds-RUP94374.1;Parent=gene-D8M19_04555;Dbxref=NCBI_GP:RUP94374.1;Name=RUP94374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822223.1;locus_tag=D8M19_04555;product=leucine--tRNA ligase;protein_id=RUP94374.1;transl_table=11 RBLY01000003.1 Genbank gene 278278 279195 . + . ID=gene-D8M19_04560;Name=D8M19_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04560 RBLY01000003.1 GeneMarkS+ CDS 278278 279195 . + 0 ID=cds-RUP94315.1;Parent=gene-D8M19_04560;Dbxref=NCBI_GP:RUP94315.1;Name=RUP94315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04560;product=hypothetical protein;protein_id=RUP94315.1;transl_table=11 RBLY01000003.1 Genbank gene 279403 280686 . + . ID=gene-D8M19_04565;Name=D8M19_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04565 RBLY01000003.1 Protein Homology CDS 279403 280686 . + 0 ID=cds-RUP94316.1;Parent=gene-D8M19_04565;Dbxref=NCBI_GP:RUP94316.1;Name=RUP94316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120601.1;locus_tag=D8M19_04565;product=Na/Pi cotransporter family protein;protein_id=RUP94316.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 280754 280996 . + . ID=gene-D8M19_04570;Name=D8M19_04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04570;pseudo=true RBLY01000003.1 Protein Homology CDS 280754 280996 . + 0 ID=cds-D8M19_04570;Parent=gene-D8M19_04570;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013837987.1;locus_tag=D8M19_04570;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 281237 282697 . - . ID=gene-D8M19_04575;Name=D8M19_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04575 RBLY01000003.1 Protein Homology CDS 281237 282697 . - 0 ID=cds-RUP94317.1;Parent=gene-D8M19_04575;Dbxref=NCBI_GP:RUP94317.1;Name=RUP94317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010935632.1;locus_tag=D8M19_04575;product=DUF5129 domain-containing protein;protein_id=RUP94317.1;transl_table=11 RBLY01000003.1 Genbank gene 282749 283114 . - . ID=gene-D8M19_04580;Name=D8M19_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04580 RBLY01000003.1 Protein Homology CDS 282749 283114 . - 0 ID=cds-RUP94318.1;Parent=gene-D8M19_04580;Dbxref=NCBI_GP:RUP94318.1;Name=RUP94318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120598.1;locus_tag=D8M19_04580;product=hypothetical protein;protein_id=RUP94318.1;transl_table=11 RBLY01000003.1 Genbank gene 283508 284074 . + . ID=gene-D8M19_04585;Name=D8M19_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04585 RBLY01000003.1 GeneMarkS+ CDS 283508 284074 . + 0 ID=cds-RUP94319.1;Parent=gene-D8M19_04585;Dbxref=NCBI_GP:RUP94319.1;Name=RUP94319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04585;product=hypothetical protein;protein_id=RUP94319.1;transl_table=11 RBLY01000003.1 Genbank gene 284285 284638 . + . ID=gene-D8M19_04590;Name=D8M19_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04590 RBLY01000003.1 GeneMarkS+ CDS 284285 284638 . + 0 ID=cds-RUP94320.1;Parent=gene-D8M19_04590;Dbxref=NCBI_GP:RUP94320.1;Name=RUP94320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04590;product=hypothetical protein;protein_id=RUP94320.1;transl_table=11 RBLY01000003.1 Genbank gene 284826 286208 . - . ID=gene-D8M19_04595;Name=D8M19_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04595 RBLY01000003.1 Protein Homology CDS 284826 286208 . - 0 ID=cds-RUP94375.1;Parent=gene-D8M19_04595;Dbxref=NCBI_GP:RUP94375.1;Name=RUP94375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322423.1;locus_tag=D8M19_04595;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=RUP94375.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 286614 287168 . + . ID=gene-D8M19_04600;Name=D8M19_04600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04600;pseudo=true RBLY01000003.1 Protein Homology CDS 286614 287168 . + 0 ID=cds-D8M19_04600;Parent=gene-D8M19_04600;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120594.1;locus_tag=D8M19_04600;product=nitrite/sulfite reductase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank pseudogene 287345 287683 . + . ID=gene-D8M19_04605;Name=D8M19_04605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04605;pseudo=true RBLY01000003.1 Protein Homology CDS 287345 287683 . + 0 ID=cds-D8M19_04605;Parent=gene-D8M19_04605;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120593.1;locus_tag=D8M19_04605;product=phosphoadenylyl-sulfate reductase;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 287777 287977 . - . ID=gene-D8M19_04610;Name=D8M19_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04610 RBLY01000003.1 GeneMarkS+ CDS 287777 287977 . - 0 ID=cds-RUP94321.1;Parent=gene-D8M19_04610;Dbxref=NCBI_GP:RUP94321.1;Name=RUP94321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04610;product=hypothetical protein;protein_id=RUP94321.1;transl_table=11 RBLY01000003.1 Genbank gene 288727 289404 . + . ID=gene-D8M19_04615;Name=D8M19_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04615 RBLY01000003.1 Protein Homology CDS 288727 289404 . + 0 ID=cds-RUP94322.1;Parent=gene-D8M19_04615;Dbxref=NCBI_GP:RUP94322.1;Name=RUP94322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281531.1;locus_tag=D8M19_04615;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=RUP94322.1;transl_table=11 RBLY01000003.1 Genbank gene 289495 291141 . - . ID=gene-D8M19_04620;Name=D8M19_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04620 RBLY01000003.1 Protein Homology CDS 289495 291141 . - 0 ID=cds-RUP94376.1;Parent=gene-D8M19_04620;Dbxref=NCBI_GP:RUP94376.1;Name=RUP94376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013888374.1;locus_tag=D8M19_04620;product=FAD-binding dehydrogenase;protein_id=RUP94376.1;transl_table=11 RBLY01000003.1 Genbank gene 291226 291843 . - . ID=gene-D8M19_04625;Name=D8M19_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04625 RBLY01000003.1 Protein Homology CDS 291226 291843 . - 0 ID=cds-RUP94323.1;Parent=gene-D8M19_04625;Dbxref=NCBI_GP:RUP94323.1;Name=RUP94323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120580.1;locus_tag=D8M19_04625;product=DNA-binding response regulator;protein_id=RUP94323.1;transl_table=11 RBLY01000003.1 Genbank gene 291859 293109 . - . ID=gene-D8M19_04630;Name=D8M19_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04630 RBLY01000003.1 Protein Homology CDS 291859 293109 . - 0 ID=cds-RUP94377.1;Parent=gene-D8M19_04630;Dbxref=NCBI_GP:RUP94377.1;Name=RUP94377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846870.1;locus_tag=D8M19_04630;product=sensor histidine kinase;protein_id=RUP94377.1;transl_table=11 RBLY01000003.1 Genbank gene 293348 294538 . + . ID=gene-D8M19_04635;Name=D8M19_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04635 RBLY01000003.1 Protein Homology CDS 293348 294538 . + 0 ID=cds-RUP94324.1;Parent=gene-D8M19_04635;Dbxref=NCBI_GP:RUP94324.1;Name=RUP94324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120578.1;locus_tag=D8M19_04635;product=ABC transporter permease;protein_id=RUP94324.1;transl_table=11 RBLY01000003.1 Genbank gene 294607 295263 . + . ID=gene-D8M19_04640;Name=D8M19_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04640 RBLY01000003.1 Protein Homology CDS 294607 295263 . + 0 ID=cds-RUP94378.1;Parent=gene-D8M19_04640;Dbxref=NCBI_GP:RUP94378.1;Name=RUP94378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017141.1;locus_tag=D8M19_04640;product=ABC transporter ATP-binding protein;protein_id=RUP94378.1;transl_table=11 RBLY01000003.1 Genbank gene 295318 296673 . + . ID=gene-D8M19_04645;Name=D8M19_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04645 RBLY01000003.1 Protein Homology CDS 295318 296673 . + 0 ID=cds-RUP94325.1;Parent=gene-D8M19_04645;Dbxref=NCBI_GP:RUP94325.1;Name=RUP94325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120576.1;locus_tag=D8M19_04645;product=TrkH family potassium uptake protein;protein_id=RUP94325.1;transl_table=11 RBLY01000003.1 Genbank gene 296666 297325 . + . ID=gene-D8M19_04650;Name=D8M19_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04650 RBLY01000003.1 Protein Homology CDS 296666 297325 . + 0 ID=cds-RUP94326.1;Parent=gene-D8M19_04650;Dbxref=NCBI_GP:RUP94326.1;Name=RUP94326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120575.1;locus_tag=D8M19_04650;product=TrkA family potassium uptake protein;protein_id=RUP94326.1;transl_table=11 RBLY01000003.1 Genbank gene 297354 297620 . - . ID=gene-D8M19_04655;Name=D8M19_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04655 RBLY01000003.1 Protein Homology CDS 297354 297620 . - 0 ID=cds-RUP94327.1;Parent=gene-D8M19_04655;Dbxref=NCBI_GP:RUP94327.1;Name=RUP94327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011742436.1;locus_tag=D8M19_04655;product=hypothetical protein;protein_id=RUP94327.1;transl_table=11 RBLY01000003.1 Genbank gene 297975 298172 . + . ID=gene-D8M19_04660;Name=D8M19_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04660 RBLY01000003.1 GeneMarkS+ CDS 297975 298172 . + 0 ID=cds-RUP94328.1;Parent=gene-D8M19_04660;Dbxref=NCBI_GP:RUP94328.1;Name=RUP94328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04660;product=hypothetical protein;protein_id=RUP94328.1;transl_table=11 RBLY01000003.1 Genbank gene 299027 299323 . - . ID=gene-D8M19_04665;Name=D8M19_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04665 RBLY01000003.1 GeneMarkS+ CDS 299027 299323 . - 0 ID=cds-RUP94329.1;Parent=gene-D8M19_04665;Dbxref=NCBI_GP:RUP94329.1;Name=RUP94329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04665;product=hypothetical protein;protein_id=RUP94329.1;transl_table=11 RBLY01000003.1 Genbank gene 300016 300735 . - . ID=gene-D8M19_04670;Name=D8M19_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04670 RBLY01000003.1 Protein Homology CDS 300016 300735 . - 0 ID=cds-RUP94379.1;Parent=gene-D8M19_04670;Dbxref=NCBI_GP:RUP94379.1;Name=RUP94379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770343.1;locus_tag=D8M19_04670;product=hypothetical protein;protein_id=RUP94379.1;transl_table=11 RBLY01000003.1 Genbank gene 300901 301083 . - . ID=gene-D8M19_04675;Name=D8M19_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04675 RBLY01000003.1 GeneMarkS+ CDS 300901 301083 . - 0 ID=cds-RUP94330.1;Parent=gene-D8M19_04675;Dbxref=NCBI_GP:RUP94330.1;Name=RUP94330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04675;product=hypothetical protein;protein_id=RUP94330.1;transl_table=11 RBLY01000003.1 Genbank gene 301120 302340 . + . ID=gene-D8M19_04680;Name=D8M19_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04680 RBLY01000003.1 Protein Homology CDS 301120 302340 . + 0 ID=cds-RUP94331.1;Parent=gene-D8M19_04680;Dbxref=NCBI_GP:RUP94331.1;Name=RUP94331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07730.11;locus_tag=D8M19_04680;product=histidine kinase;protein_id=RUP94331.1;transl_table=11 RBLY01000003.1 Genbank gene 302386 303069 . + . ID=gene-D8M19_04685;Name=D8M19_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04685 RBLY01000003.1 Protein Homology CDS 302386 303069 . + 0 ID=cds-RUP94332.1;Parent=gene-D8M19_04685;Dbxref=NCBI_GP:RUP94332.1;Name=RUP94332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120564.1;locus_tag=D8M19_04685;product=DNA-binding response regulator;protein_id=RUP94332.1;transl_table=11 RBLY01000003.1 Genbank gene 303199 303924 . + . ID=gene-D8M19_04690;Name=D8M19_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04690 RBLY01000003.1 Protein Homology CDS 303199 303924 . + 0 ID=cds-RUP94380.1;Parent=gene-D8M19_04690;Dbxref=NCBI_GP:RUP94380.1;Name=RUP94380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069218.1;locus_tag=D8M19_04690;product=ATP-binding cassette domain-containing protein;protein_id=RUP94380.1;transl_table=11 RBLY01000003.1 Genbank gene 303921 305453 . + . ID=gene-D8M19_04695;Name=D8M19_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04695 RBLY01000003.1 GeneMarkS+ CDS 303921 305453 . + 0 ID=cds-RUP94333.1;Parent=gene-D8M19_04695;Dbxref=NCBI_GP:RUP94333.1;Name=RUP94333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04695;product=hypothetical protein;protein_id=RUP94333.1;transl_table=11 RBLY01000003.1 Genbank gene 305535 305984 . - . ID=gene-D8M19_04700;Name=D8M19_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04700 RBLY01000003.1 GeneMarkS+ CDS 305535 305984 . - 0 ID=cds-RUP94334.1;Parent=gene-D8M19_04700;Dbxref=NCBI_GP:RUP94334.1;Name=RUP94334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04700;product=hypothetical protein;protein_id=RUP94334.1;transl_table=11 RBLY01000003.1 Genbank gene 306127 306462 . + . ID=gene-D8M19_04705;Name=D8M19_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04705 RBLY01000003.1 Protein Homology CDS 306127 306462 . + 0 ID=cds-RUP94381.1;Parent=gene-D8M19_04705;Dbxref=NCBI_GP:RUP94381.1;Name=RUP94381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006436816.1;locus_tag=D8M19_04705;product=hypothetical protein;protein_id=RUP94381.1;transl_table=11 RBLY01000003.1 Genbank gene 306534 308480 . - . ID=gene-D8M19_04710;Name=D8M19_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04710 RBLY01000003.1 Protein Homology CDS 306534 308480 . - 0 ID=cds-RUP94335.1;Parent=gene-D8M19_04710;Dbxref=NCBI_GP:RUP94335.1;Name=RUP94335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01256.15;locus_tag=D8M19_04710;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=RUP94335.1;transl_table=11 RBLY01000003.1 Genbank gene 308537 309430 . - . ID=gene-D8M19_04715;Name=D8M19_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04715 RBLY01000003.1 Protein Homology CDS 308537 309430 . - 0 ID=cds-RUP94336.1;Parent=gene-D8M19_04715;Dbxref=NCBI_GP:RUP94336.1;Name=RUP94336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120558.1;locus_tag=D8M19_04715;product=Fpg/Nei family DNA glycosylase;protein_id=RUP94336.1;transl_table=11 RBLY01000003.1 Genbank gene 309608 311101 . + . ID=gene-D8M19_04720;Name=D8M19_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04720 RBLY01000003.1 Protein Homology CDS 309608 311101 . + 0 ID=cds-RUP94337.1;Parent=gene-D8M19_04720;Dbxref=NCBI_GP:RUP94337.1;Name=RUP94337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120557.1;locus_tag=D8M19_04720;product=DUF1846 domain-containing protein;protein_id=RUP94337.1;transl_table=11 RBLY01000003.1 Genbank gene 311251 312234 . + . ID=gene-D8M19_04725;Name=D8M19_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04725 RBLY01000003.1 Protein Homology CDS 311251 312234 . + 0 ID=cds-RUP94338.1;Parent=gene-D8M19_04725;Dbxref=NCBI_GP:RUP94338.1;Name=RUP94338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120556.1;locus_tag=D8M19_04725;product=rhodanese-related sulfurtransferase;protein_id=RUP94338.1;transl_table=11 RBLY01000003.1 Genbank gene 312296 312763 . - . ID=gene-D8M19_04730;Name=D8M19_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04730 RBLY01000003.1 GeneMarkS+ CDS 312296 312763 . - 0 ID=cds-RUP94339.1;Parent=gene-D8M19_04730;Dbxref=NCBI_GP:RUP94339.1;Name=RUP94339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04730;product=hypothetical protein;protein_id=RUP94339.1;transl_table=11 RBLY01000003.1 Genbank gene 312807 313799 . - . ID=gene-D8M19_04735;Name=D8M19_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04735 RBLY01000003.1 Protein Homology CDS 312807 313799 . - 0 ID=cds-RUP94340.1;Parent=gene-D8M19_04735;Dbxref=NCBI_GP:RUP94340.1;Name=RUP94340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120554.1;locus_tag=D8M19_04735;product=universal stress protein;protein_id=RUP94340.1;transl_table=11 RBLY01000003.1 Genbank gene 313819 314274 . - . ID=gene-D8M19_04740;Name=D8M19_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04740 RBLY01000003.1 Protein Homology CDS 313819 314274 . - 0 ID=cds-RUP94341.1;Parent=gene-D8M19_04740;Dbxref=NCBI_GP:RUP94341.1;Name=RUP94341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120553.1;locus_tag=D8M19_04740;product=MarR family transcriptional regulator;protein_id=RUP94341.1;transl_table=11 RBLY01000003.1 Genbank pseudogene 314347 314750 . - . ID=gene-D8M19_04745;Name=D8M19_04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04745;pseudo=true RBLY01000003.1 Protein Homology CDS 314347 314750 . - 0 ID=cds-D8M19_04745;Parent=gene-D8M19_04745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402109.1;locus_tag=D8M19_04745;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000003.1 Genbank gene 314944 317235 . + . ID=gene-D8M19_04750;Name=D8M19_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04750 RBLY01000003.1 Protein Homology CDS 314944 317235 . + 0 ID=cds-RUP94342.1;Parent=gene-D8M19_04750;Dbxref=NCBI_GP:RUP94342.1;Name=RUP94342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120551.1;locus_tag=D8M19_04750;product=penicillin-binding protein;protein_id=RUP94342.1;transl_table=11 RBLY01000003.1 Genbank gene 317235 318761 . + . ID=gene-D8M19_04755;Name=D8M19_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04755 RBLY01000003.1 Protein Homology CDS 317235 318761 . + 0 ID=cds-RUP94343.1;Parent=gene-D8M19_04755;Dbxref=NCBI_GP:RUP94343.1;Name=RUP94343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120550.1;locus_tag=D8M19_04755;product=DUF2029 domain-containing protein;protein_id=RUP94343.1;transl_table=11 RBLY01000003.1 Genbank gene 318758 318949 . + . ID=gene-D8M19_04760;Name=D8M19_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04760 RBLY01000003.1 Protein Homology CDS 318758 318949 . + 0 ID=cds-RUP94344.1;Parent=gene-D8M19_04760;Dbxref=NCBI_GP:RUP94344.1;Name=RUP94344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120549.1;locus_tag=D8M19_04760;product=hypothetical protein;protein_id=RUP94344.1;transl_table=11 RBLY01000003.1 Genbank gene 319216 319512 . + . ID=gene-D8M19_04765;Name=D8M19_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04765 RBLY01000003.1 Protein Homology CDS 319216 319512 . + 0 ID=cds-RUP94345.1;Parent=gene-D8M19_04765;Dbxref=NCBI_GP:RUP94345.1;Name=RUP94345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325941.1;locus_tag=D8M19_04765;product=30S ribosomal protein S6;protein_id=RUP94345.1;transl_table=11 RBLY01000003.1 Genbank gene 319574 320149 . + . ID=gene-D8M19_04770;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=D8M19_04770 RBLY01000003.1 Protein Homology CDS 319574 320149 . + 0 ID=cds-RUP94346.1;Parent=gene-D8M19_04770;Dbxref=NCBI_GP:RUP94346.1;Name=RUP94346.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367826.1;locus_tag=D8M19_04770;product=single-stranded DNA-binding protein;protein_id=RUP94346.1;transl_table=11 RBLY01000003.1 Genbank gene 320238 320699 . + . ID=gene-D8M19_04775;Name=D8M19_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04775 RBLY01000003.1 Protein Homology CDS 320238 320699 . + 0 ID=cds-RUP94347.1;Parent=gene-D8M19_04775;Dbxref=NCBI_GP:RUP94347.1;Name=RUP94347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120546.1;locus_tag=D8M19_04775;product=50S ribosomal protein L9;protein_id=RUP94347.1;transl_table=11 RBLY01000003.1 Genbank gene 321277 322824 . + . ID=gene-D8M19_04780;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=D8M19_04780 RBLY01000003.1 Protein Homology CDS 321277 322824 . + 0 ID=cds-RUP94348.1;Parent=gene-D8M19_04780;Dbxref=NCBI_GP:RUP94348.1;Name=RUP94348.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120545.1;locus_tag=D8M19_04780;product=replicative DNA helicase;protein_id=RUP94348.1;transl_table=11 RBLY01000003.1 Genbank gene 323008 323385 . + . ID=gene-D8M19_04785;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=D8M19_04785 RBLY01000003.1 Protein Homology CDS 323008 323385 . + 0 ID=cds-RUP94349.1;Parent=gene-D8M19_04785;Dbxref=NCBI_GP:RUP94349.1;Name=RUP94349.1;gbkey=CDS;gene=trxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003853131.1;locus_tag=D8M19_04785;product=thioredoxin;protein_id=RUP94349.1;transl_table=11 RBLY01000003.1 Genbank gene 323725 324903 . + . ID=gene-D8M19_04790;Name=D8M19_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04790 RBLY01000003.1 Protein Homology CDS 323725 324903 . + 0 ID=cds-RUP94350.1;Parent=gene-D8M19_04790;Dbxref=NCBI_GP:RUP94350.1;Name=RUP94350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120543.1;locus_tag=D8M19_04790;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=RUP94350.1;transl_table=11 RBLY01000003.1 Genbank gene 324922 325809 . + . ID=gene-D8M19_04795;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=D8M19_04795 RBLY01000003.1 Protein Homology CDS 324922 325809 . + 0 ID=cds-RUP94351.1;Parent=gene-D8M19_04795;Dbxref=NCBI_GP:RUP94351.1;Name=RUP94351.1;gbkey=CDS;gene=sucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120542.1;locus_tag=D8M19_04795;product=succinate--CoA ligase subunit alpha;protein_id=RUP94351.1;transl_table=11 RBLY01000003.1 Genbank gene 326048 326866 . + . ID=gene-D8M19_04800;Name=D8M19_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04800 RBLY01000003.1 Protein Homology CDS 326048 326866 . + 0 ID=cds-RUP94352.1;Parent=gene-D8M19_04800;Dbxref=NCBI_GP:RUP94352.1;Name=RUP94352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017119.1;locus_tag=D8M19_04800;product=PspA/IM30 family protein;protein_id=RUP94352.1;transl_table=11 RBLY01000003.1 Genbank gene 327025 328560 . - . ID=gene-D8M19_04805;Name=D8M19_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04805 RBLY01000003.1 Protein Homology CDS 327025 328560 . - 0 ID=cds-RUP94353.1;Parent=gene-D8M19_04805;Dbxref=NCBI_GP:RUP94353.1;Name=RUP94353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120540.1;locus_tag=D8M19_04805;product=NYN domain-containing protein;protein_id=RUP94353.1;transl_table=11 ##sequence-region RBLY01000004.1 1 267328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000004.1 Genbank region 1 267328 . + . ID=RBLY01000004.1:1..267328;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000004.1 Genbank gene 148 465 . + . ID=gene-D8M19_04810;Name=D8M19_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04810 RBLY01000004.1 Protein Homology CDS 148 465 . + 0 ID=cds-RUP93411.1;Parent=gene-D8M19_04810;Dbxref=NCBI_GP:RUP93411.1;Name=RUP93411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823266.1;locus_tag=D8M19_04810;product=WXG100 family type VII secretion target;protein_id=RUP93411.1;transl_table=11 RBLY01000004.1 Genbank gene 556 843 . + . ID=gene-D8M19_04815;Name=D8M19_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04815 RBLY01000004.1 Protein Homology CDS 556 843 . + 0 ID=cds-RUP93601.1;Parent=gene-D8M19_04815;Dbxref=NCBI_GP:RUP93601.1;Name=RUP93601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848225.1;locus_tag=D8M19_04815;product=WXG100 family type VII secretion target;protein_id=RUP93601.1;transl_table=11 RBLY01000004.1 Genbank gene 1166 1609 . + . ID=gene-D8M19_04820;Name=D8M19_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04820 RBLY01000004.1 Protein Homology CDS 1166 1609 . + 0 ID=cds-RUP93412.1;Parent=gene-D8M19_04820;Dbxref=NCBI_GP:RUP93412.1;Name=RUP93412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286590.1;locus_tag=D8M19_04820;product=50S ribosomal protein L13;protein_id=RUP93412.1;transl_table=11 RBLY01000004.1 Genbank gene 1609 2148 . + . ID=gene-D8M19_04825;Name=D8M19_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04825 RBLY01000004.1 Protein Homology CDS 1609 2148 . + 0 ID=cds-RUP93413.1;Parent=gene-D8M19_04825;Dbxref=NCBI_GP:RUP93413.1;Name=RUP93413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004566875.1;locus_tag=D8M19_04825;product=30S ribosomal protein S9;protein_id=RUP93413.1;transl_table=11 RBLY01000004.1 Genbank gene 2486 2866 . + . ID=gene-D8M19_04830;Name=D8M19_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04830 RBLY01000004.1 GeneMarkS+ CDS 2486 2866 . + 0 ID=cds-RUP93414.1;Parent=gene-D8M19_04830;Dbxref=NCBI_GP:RUP93414.1;Name=RUP93414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04830;product=hypothetical protein;protein_id=RUP93414.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 2979 4073 . - . ID=gene-D8M19_04835;Name=D8M19_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_04835;pseudo=true RBLY01000004.1 Protein Homology CDS 2979 4073 . - 0 ID=cds-D8M19_04835;Parent=gene-D8M19_04835;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M19_04835;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 4426 5805 . - . ID=gene-D8M19_04840;Name=D8M19_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04840 RBLY01000004.1 Protein Homology CDS 4426 5805 . - 0 ID=cds-RUP93415.1;Parent=gene-D8M19_04840;Dbxref=NCBI_GP:RUP93415.1;Name=RUP93415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121479.1;locus_tag=D8M19_04840;product=MFS transporter;protein_id=RUP93415.1;transl_table=11 RBLY01000004.1 Genbank gene 5909 7252 . + . ID=gene-D8M19_04845;Name=D8M19_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04845 RBLY01000004.1 Protein Homology CDS 5909 7252 . + 0 ID=cds-RUP93416.1;Parent=gene-D8M19_04845;Dbxref=NCBI_GP:RUP93416.1;Name=RUP93416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189502.1;locus_tag=D8M19_04845;product=phosphoglucosamine mutase;protein_id=RUP93416.1;transl_table=11 RBLY01000004.1 Genbank gene 7411 7725 . + . ID=gene-D8M19_04850;Name=D8M19_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04850 RBLY01000004.1 GeneMarkS+ CDS 7411 7725 . + 0 ID=cds-RUP93417.1;Parent=gene-D8M19_04850;Dbxref=NCBI_GP:RUP93417.1;Name=RUP93417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04850;product=hypothetical protein;protein_id=RUP93417.1;transl_table=11 RBLY01000004.1 Genbank gene 9159 9374 . + . ID=gene-D8M19_04855;Name=D8M19_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04855 RBLY01000004.1 GeneMarkS+ CDS 9159 9374 . + 0 ID=cds-RUP93418.1;Parent=gene-D8M19_04855;Dbxref=NCBI_GP:RUP93418.1;Name=RUP93418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04855;product=hypothetical protein;protein_id=RUP93418.1;transl_table=11 RBLY01000004.1 Genbank gene 9368 9682 . + . ID=gene-D8M19_04860;Name=D8M19_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04860 RBLY01000004.1 Protein Homology CDS 9368 9682 . + 0 ID=cds-RUP93419.1;Parent=gene-D8M19_04860;Dbxref=NCBI_GP:RUP93419.1;Name=RUP93419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322739.1;locus_tag=D8M19_04860;product=translation initiation factor IF-2;protein_id=RUP93419.1;transl_table=11 RBLY01000004.1 Genbank gene 9701 10513 . - . ID=gene-D8M19_04865;Name=D8M19_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04865 RBLY01000004.1 Protein Homology CDS 9701 10513 . - 0 ID=cds-RUP93602.1;Parent=gene-D8M19_04865;Dbxref=NCBI_GP:RUP93602.1;Name=RUP93602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121484.1;locus_tag=D8M19_04865;product=alpha/beta hydrolase;protein_id=RUP93602.1;transl_table=11 RBLY01000004.1 Genbank gene 10632 12503 . + . ID=gene-D8M19_04870;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=D8M19_04870 RBLY01000004.1 Protein Homology CDS 10632 12503 . + 0 ID=cds-RUP93420.1;Parent=gene-D8M19_04870;Dbxref=NCBI_GP:RUP93420.1;Name=RUP93420.1;gbkey=CDS;gene=glmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601471.2;locus_tag=D8M19_04870;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=RUP93420.1;transl_table=11 RBLY01000004.1 Genbank gene 12567 13679 . + . ID=gene-D8M19_04875;Name=D8M19_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04875 RBLY01000004.1 Protein Homology CDS 12567 13679 . + 0 ID=cds-RUP93421.1;Parent=gene-D8M19_04875;Dbxref=NCBI_GP:RUP93421.1;Name=RUP93421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823276.1;locus_tag=D8M19_04875;product=alanine racemase;protein_id=RUP93421.1;transl_table=11 RBLY01000004.1 Genbank gene 13676 14245 . + . ID=gene-D8M19_04880;Name=D8M19_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04880 RBLY01000004.1 Protein Homology CDS 13676 14245 . + 0 ID=cds-RUP93422.1;Parent=gene-D8M19_04880;Dbxref=NCBI_GP:RUP93422.1;Name=RUP93422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281371.1;locus_tag=D8M19_04880;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=RUP93422.1;transl_table=11 RBLY01000004.1 Genbank gene 14381 14851 . + . ID=gene-D8M19_04885;Name=D8M19_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04885 RBLY01000004.1 GeneMarkS+ CDS 14381 14851 . + 0 ID=cds-RUP93423.1;Parent=gene-D8M19_04885;Dbxref=NCBI_GP:RUP93423.1;Name=RUP93423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04885;product=hypothetical protein;protein_id=RUP93423.1;transl_table=11 RBLY01000004.1 Genbank gene 14854 15600 . + . ID=gene-D8M19_04890;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=D8M19_04890 RBLY01000004.1 Protein Homology CDS 14854 15600 . + 0 ID=cds-RUP93424.1;Parent=gene-D8M19_04890;Dbxref=NCBI_GP:RUP93424.1;Name=RUP93424.1;gbkey=CDS;gene=tsaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527864.1;locus_tag=D8M19_04890;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=RUP93424.1;transl_table=11 RBLY01000004.1 Genbank gene 15717 16226 . + . ID=gene-D8M19_04895;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=D8M19_04895 RBLY01000004.1 Protein Homology CDS 15717 16226 . + 0 ID=cds-RUP93603.1;Parent=gene-D8M19_04895;Dbxref=NCBI_GP:RUP93603.1;Name=RUP93603.1;gbkey=CDS;gene=rimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277169.1;locus_tag=D8M19_04895;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=RUP93603.1;transl_table=11 RBLY01000004.1 Genbank gene 16223 17278 . + . ID=gene-D8M19_04900;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=D8M19_04900 RBLY01000004.1 Protein Homology CDS 16223 17278 . + 0 ID=cds-RUP93425.1;Parent=gene-D8M19_04900;Dbxref=NCBI_GP:RUP93425.1;Name=RUP93425.1;gbkey=CDS;gene=tsaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121491.1;locus_tag=D8M19_04900;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=RUP93425.1;transl_table=11 RBLY01000004.1 Genbank gene 17603 17902 . + . ID=gene-D8M19_04905;Name=D8M19_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04905 RBLY01000004.1 Protein Homology CDS 17603 17902 . + 0 ID=cds-RUP93604.1;Parent=gene-D8M19_04905;Dbxref=NCBI_GP:RUP93604.1;Name=RUP93604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297709.1;locus_tag=D8M19_04905;product=co-chaperone GroES;protein_id=RUP93604.1;transl_table=11 RBLY01000004.1 Genbank gene 17919 19538 . + . ID=gene-D8M19_04910;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D8M19_04910 RBLY01000004.1 Protein Homology CDS 17919 19538 . + 0 ID=cds-RUP93426.1;Parent=gene-D8M19_04910;Dbxref=NCBI_GP:RUP93426.1;Name=RUP93426.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823284.1;locus_tag=D8M19_04910;product=chaperonin GroEL;protein_id=RUP93426.1;transl_table=11 RBLY01000004.1 Genbank gene 19903 20472 . + . ID=gene-D8M19_04915;Name=D8M19_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04915 RBLY01000004.1 Protein Homology CDS 19903 20472 . + 0 ID=cds-RUP93427.1;Parent=gene-D8M19_04915;Dbxref=NCBI_GP:RUP93427.1;Name=RUP93427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823288.1;locus_tag=D8M19_04915;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP93427.1;transl_table=11 RBLY01000004.1 Genbank gene 20475 21515 . + . ID=gene-D8M19_04920;Name=D8M19_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04920 RBLY01000004.1 GeneMarkS+ CDS 20475 21515 . + 0 ID=cds-RUP93428.1;Parent=gene-D8M19_04920;Dbxref=NCBI_GP:RUP93428.1;Name=RUP93428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04920;product=hypothetical protein;protein_id=RUP93428.1;transl_table=11 RBLY01000004.1 Genbank gene 21528 21938 . - . ID=gene-D8M19_04925;Name=D8M19_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04925 RBLY01000004.1 Protein Homology CDS 21528 21938 . - 0 ID=cds-RUP93429.1;Parent=gene-D8M19_04925;Dbxref=NCBI_GP:RUP93429.1;Name=RUP93429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121497.1;locus_tag=D8M19_04925;product=hypothetical protein;protein_id=RUP93429.1;transl_table=11 RBLY01000004.1 Genbank gene 22077 23594 . + . ID=gene-D8M19_04930;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=D8M19_04930 RBLY01000004.1 Protein Homology CDS 22077 23594 . + 0 ID=cds-RUP93430.1;Parent=gene-D8M19_04930;Dbxref=NCBI_GP:RUP93430.1;Name=RUP93430.1;gbkey=CDS;gene=guaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277200.1;locus_tag=D8M19_04930;product=IMP dehydrogenase;protein_id=RUP93430.1;transl_table=11 RBLY01000004.1 Genbank gene 23648 24808 . + . ID=gene-D8M19_04935;Name=D8M19_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04935 RBLY01000004.1 Protein Homology CDS 23648 24808 . + 0 ID=cds-RUP93431.1;Parent=gene-D8M19_04935;Dbxref=NCBI_GP:RUP93431.1;Name=RUP93431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121499.1;locus_tag=D8M19_04935;product=GuaB3 family IMP dehydrogenase-related protein;protein_id=RUP93431.1;transl_table=11 RBLY01000004.1 Genbank gene 24840 25769 . - . ID=gene-D8M19_04940;Name=D8M19_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04940 RBLY01000004.1 Protein Homology CDS 24840 25769 . - 0 ID=cds-RUP93432.1;Parent=gene-D8M19_04940;Dbxref=NCBI_GP:RUP93432.1;Name=RUP93432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121500.1;locus_tag=D8M19_04940;product=EamA family transporter;protein_id=RUP93432.1;transl_table=11 RBLY01000004.1 Genbank gene 25905 27479 . + . ID=gene-D8M19_04945;Name=D8M19_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04945 RBLY01000004.1 Protein Homology CDS 25905 27479 . + 0 ID=cds-RUP93433.1;Parent=gene-D8M19_04945;Dbxref=NCBI_GP:RUP93433.1;Name=RUP93433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121501.1;locus_tag=D8M19_04945;product=glutamine-hydrolyzing GMP synthase;protein_id=RUP93433.1;transl_table=11 RBLY01000004.1 Genbank gene 27700 28191 . - . ID=gene-D8M19_04950;Name=D8M19_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04950 RBLY01000004.1 GeneMarkS+ CDS 27700 28191 . - 0 ID=cds-RUP93434.1;Parent=gene-D8M19_04950;Dbxref=NCBI_GP:RUP93434.1;Name=RUP93434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04950;product=hypothetical protein;protein_id=RUP93434.1;transl_table=11 RBLY01000004.1 Genbank gene 28541 29338 . + . ID=gene-D8M19_04955;Name=D8M19_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04955 RBLY01000004.1 GeneMarkS+ CDS 28541 29338 . + 0 ID=cds-RUP93435.1;Parent=gene-D8M19_04955;Dbxref=NCBI_GP:RUP93435.1;Name=RUP93435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04955;product=hypothetical protein;protein_id=RUP93435.1;transl_table=11 RBLY01000004.1 Genbank gene 29339 31093 . + . ID=gene-D8M19_04960;Name=D8M19_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04960 RBLY01000004.1 Protein Homology CDS 29339 31093 . + 0 ID=cds-RUP93436.1;Parent=gene-D8M19_04960;Dbxref=NCBI_GP:RUP93436.1;Name=RUP93436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121504.1;locus_tag=D8M19_04960;product=DNA polymerase Y family protein;protein_id=RUP93436.1;transl_table=11 RBLY01000004.1 Genbank gene 31090 31767 . - . ID=gene-D8M19_04965;Name=D8M19_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04965 RBLY01000004.1 GeneMarkS+ CDS 31090 31767 . - 0 ID=cds-RUP93437.1;Parent=gene-D8M19_04965;Dbxref=NCBI_GP:RUP93437.1;Name=RUP93437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_04965;product=hypothetical protein;protein_id=RUP93437.1;transl_table=11 RBLY01000004.1 Genbank gene 31935 32900 . + . ID=gene-D8M19_04970;Name=D8M19_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04970 RBLY01000004.1 Protein Homology CDS 31935 32900 . + 0 ID=cds-RUP93438.1;Parent=gene-D8M19_04970;Dbxref=NCBI_GP:RUP93438.1;Name=RUP93438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400042.1;locus_tag=D8M19_04970;product=sucrase ferredoxin;protein_id=RUP93438.1;transl_table=11 RBLY01000004.1 Genbank gene 32915 33946 . - . ID=gene-D8M19_04975;Name=D8M19_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04975 RBLY01000004.1 Protein Homology CDS 32915 33946 . - 0 ID=cds-RUP93439.1;Parent=gene-D8M19_04975;Dbxref=NCBI_GP:RUP93439.1;Name=RUP93439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121507.1;locus_tag=D8M19_04975;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP93439.1;transl_table=11 RBLY01000004.1 Genbank gene 34007 34354 . - . ID=gene-D8M19_04980;Name=D8M19_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04980 RBLY01000004.1 Protein Homology CDS 34007 34354 . - 0 ID=cds-RUP93440.1;Parent=gene-D8M19_04980;Dbxref=NCBI_GP:RUP93440.1;Name=RUP93440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011265756.1;locus_tag=D8M19_04980;product=transcriptional regulator;protein_id=RUP93440.1;transl_table=11 RBLY01000004.1 Genbank gene 34458 35546 . + . ID=gene-D8M19_04985;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=D8M19_04985 RBLY01000004.1 Protein Homology CDS 34458 35546 . + 0 ID=cds-RUP93441.1;Parent=gene-D8M19_04985;Dbxref=NCBI_GP:RUP93441.1;Name=RUP93441.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359297.1;locus_tag=D8M19_04985;product=arsenical-resistance protein;protein_id=RUP93441.1;transl_table=11 RBLY01000004.1 Genbank gene 35667 36341 . - . ID=gene-D8M19_04990;Name=D8M19_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04990 RBLY01000004.1 Protein Homology CDS 35667 36341 . - 0 ID=cds-RUP93442.1;Parent=gene-D8M19_04990;Dbxref=NCBI_GP:RUP93442.1;Name=RUP93442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004566952.1;locus_tag=D8M19_04990;product=ABC transporter permease;protein_id=RUP93442.1;transl_table=11 RBLY01000004.1 Genbank gene 36338 37414 . - . ID=gene-D8M19_04995;Name=D8M19_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_04995 RBLY01000004.1 Protein Homology CDS 36338 37414 . - 0 ID=cds-RUP93443.1;Parent=gene-D8M19_04995;Dbxref=NCBI_GP:RUP93443.1;Name=RUP93443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121510.1;locus_tag=D8M19_04995;product=methionine ABC transporter ATP-binding protein;protein_id=RUP93443.1;transl_table=11 RBLY01000004.1 Genbank gene 37538 38443 . - . ID=gene-D8M19_05000;Name=D8M19_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05000 RBLY01000004.1 Protein Homology CDS 37538 38443 . - 0 ID=cds-RUP93444.1;Parent=gene-D8M19_05000;Dbxref=NCBI_GP:RUP93444.1;Name=RUP93444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400049.1;locus_tag=D8M19_05000;product=methionine ABC transporter substrate-binding protein;protein_id=RUP93444.1;transl_table=11 RBLY01000004.1 Genbank gene 38646 41894 . + . ID=gene-D8M19_05005;Name=D8M19_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05005 RBLY01000004.1 Protein Homology CDS 38646 41894 . + 0 ID=cds-RUP93445.1;Parent=gene-D8M19_05005;Dbxref=NCBI_GP:RUP93445.1;Name=RUP93445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322664.1;locus_tag=D8M19_05005;product=error-prone DNA polymerase;protein_id=RUP93445.1;transl_table=11 RBLY01000004.1 Genbank gene 41972 43006 . - . ID=gene-D8M19_05010;Name=D8M19_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05010 RBLY01000004.1 Protein Homology CDS 41972 43006 . - 0 ID=cds-RUP93446.1;Parent=gene-D8M19_05010;Dbxref=NCBI_GP:RUP93446.1;Name=RUP93446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652363.1;locus_tag=D8M19_05010;product=ABC transporter substrate-binding protein;protein_id=RUP93446.1;transl_table=11 RBLY01000004.1 Genbank gene 43050 44486 . - . ID=gene-D8M19_05015;Name=D8M19_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05015 RBLY01000004.1 Protein Homology CDS 43050 44486 . - 0 ID=cds-RUP93447.1;Parent=gene-D8M19_05015;Dbxref=NCBI_GP:RUP93447.1;Name=RUP93447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121514.1;locus_tag=D8M19_05015;product=aldehyde dehydrogenase;protein_id=RUP93447.1;transl_table=11 RBLY01000004.1 Genbank gene 44534 45418 . - . ID=gene-D8M19_05020;Name=D8M19_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05020 RBLY01000004.1 Protein Homology CDS 44534 45418 . - 0 ID=cds-RUP93448.1;Parent=gene-D8M19_05020;Dbxref=NCBI_GP:RUP93448.1;Name=RUP93448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121515.1;locus_tag=D8M19_05020;product=dihydrodipicolinate synthase family protein;protein_id=RUP93448.1;transl_table=11 RBLY01000004.1 Genbank gene 45419 46234 . - . ID=gene-D8M19_05025;Name=D8M19_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05025 RBLY01000004.1 Protein Homology CDS 45419 46234 . - 0 ID=cds-RUP93449.1;Parent=gene-D8M19_05025;Dbxref=NCBI_GP:RUP93449.1;Name=RUP93449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04909.12;locus_tag=D8M19_05025;product=hypothetical protein;protein_id=RUP93449.1;transl_table=11 RBLY01000004.1 Genbank gene 46279 47064 . - . ID=gene-D8M19_05030;Name=D8M19_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05030 RBLY01000004.1 Protein Homology CDS 46279 47064 . - 0 ID=cds-RUP93450.1;Parent=gene-D8M19_05030;Dbxref=NCBI_GP:RUP93450.1;Name=RUP93450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121517.1;locus_tag=D8M19_05030;product=SDR family oxidoreductase;protein_id=RUP93450.1;transl_table=11 RBLY01000004.1 Genbank gene 47170 47943 . - . ID=gene-D8M19_05035;Name=D8M19_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05035 RBLY01000004.1 Protein Homology CDS 47170 47943 . - 0 ID=cds-RUP93451.1;Parent=gene-D8M19_05035;Dbxref=NCBI_GP:RUP93451.1;Name=RUP93451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121518.1;locus_tag=D8M19_05035;product=IclR family transcriptional regulator;protein_id=RUP93451.1;transl_table=11 RBLY01000004.1 Genbank gene 48198 49487 . + . ID=gene-D8M19_05040;Name=D8M19_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05040 RBLY01000004.1 Protein Homology CDS 48198 49487 . + 0 ID=cds-RUP93452.1;Parent=gene-D8M19_05040;Dbxref=NCBI_GP:RUP93452.1;Name=RUP93452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003985800.1;locus_tag=D8M19_05040;product=fuconate dehydratase;protein_id=RUP93452.1;transl_table=11 RBLY01000004.1 Genbank gene 49555 50937 . + . ID=gene-D8M19_05045;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=D8M19_05045 RBLY01000004.1 Protein Homology CDS 49555 50937 . + 0 ID=cds-RUP93453.1;Parent=gene-D8M19_05045;Dbxref=NCBI_GP:RUP93453.1;Name=RUP93453.1;gbkey=CDS;gene=fucP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121520.1;locus_tag=D8M19_05045;product=L-fucose:H+ symporter permease;protein_id=RUP93453.1;transl_table=11 RBLY01000004.1 Genbank gene 50940 51365 . + . ID=gene-D8M19_05050;Name=D8M19_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05050 RBLY01000004.1 Protein Homology CDS 50940 51365 . + 0 ID=cds-RUP93454.1;Parent=gene-D8M19_05050;Dbxref=NCBI_GP:RUP93454.1;Name=RUP93454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121521.1;locus_tag=D8M19_05050;product=L-fucose mutarotase;protein_id=RUP93454.1;transl_table=11 RBLY01000004.1 Genbank gene 51530 52576 . - . ID=gene-D8M19_05055;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=D8M19_05055 RBLY01000004.1 Protein Homology CDS 51530 52576 . - 0 ID=cds-RUP93455.1;Parent=gene-D8M19_05055;Dbxref=NCBI_GP:RUP93455.1;Name=RUP93455.1;gbkey=CDS;gene=hisC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121524.1;locus_tag=D8M19_05055;product=histidinol-phosphate transaminase;protein_id=RUP93455.1;transl_table=11 RBLY01000004.1 Genbank gene 52611 53951 . - . ID=gene-D8M19_05060;Name=D8M19_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05060 RBLY01000004.1 Protein Homology CDS 52611 53951 . - 0 ID=cds-RUP93456.1;Parent=gene-D8M19_05060;Dbxref=NCBI_GP:RUP93456.1;Name=RUP93456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121525.1;locus_tag=D8M19_05060;product=septum formation initiator;protein_id=RUP93456.1;transl_table=11 RBLY01000004.1 Genbank gene 54088 55827 . - . ID=gene-D8M19_05065;Name=D8M19_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05065 RBLY01000004.1 Protein Homology CDS 54088 55827 . - 0 ID=cds-RUP93457.1;Parent=gene-D8M19_05065;Dbxref=NCBI_GP:RUP93457.1;Name=RUP93457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121526.1;locus_tag=D8M19_05065;product=acetolactate synthase;protein_id=RUP93457.1;transl_table=11 RBLY01000004.1 Genbank gene 56128 56739 . - . ID=gene-D8M19_05070;Name=D8M19_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05070 RBLY01000004.1 Protein Homology CDS 56128 56739 . - 0 ID=cds-RUP93458.1;Parent=gene-D8M19_05070;Dbxref=NCBI_GP:RUP93458.1;Name=RUP93458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00188.24;locus_tag=D8M19_05070;product=CAP domain-containing protein;protein_id=RUP93458.1;transl_table=11 RBLY01000004.1 Genbank gene 56946 58100 . + . ID=gene-D8M19_05075;Name=D8M19_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05075 RBLY01000004.1 Protein Homology CDS 56946 58100 . + 0 ID=cds-RUP93605.1;Parent=gene-D8M19_05075;Dbxref=NCBI_GP:RUP93605.1;Name=RUP93605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121527.1;locus_tag=D8M19_05075;product=glycerophosphodiester phosphodiesterase;protein_id=RUP93605.1;transl_table=11 RBLY01000004.1 Genbank gene 58216 59277 . + . ID=gene-D8M19_05080;Name=D8M19_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05080 RBLY01000004.1 Protein Homology CDS 58216 59277 . + 0 ID=cds-RUP93459.1;Parent=gene-D8M19_05080;Dbxref=NCBI_GP:RUP93459.1;Name=RUP93459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324354.1;locus_tag=D8M19_05080;product=trimeric intracellular cation channel family protein;protein_id=RUP93459.1;transl_table=11 RBLY01000004.1 Genbank gene 59317 60942 . + . ID=gene-D8M19_05085;Name=D8M19_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05085 RBLY01000004.1 Protein Homology CDS 59317 60942 . + 0 ID=cds-RUP93460.1;Parent=gene-D8M19_05085;Dbxref=NCBI_GP:RUP93460.1;Name=RUP93460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014008962.1;locus_tag=D8M19_05085;product=4-coumarate--CoA ligase family protein;protein_id=RUP93460.1;transl_table=11 RBLY01000004.1 Genbank gene 60971 62614 . + . ID=gene-D8M19_05090;Name=D8M19_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05090 RBLY01000004.1 Protein Homology CDS 60971 62614 . + 0 ID=cds-RUP93461.1;Parent=gene-D8M19_05090;Dbxref=NCBI_GP:RUP93461.1;Name=RUP93461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121532.1;locus_tag=D8M19_05090;product=amidohydrolase;protein_id=RUP93461.1;transl_table=11 RBLY01000004.1 Genbank gene 62872 66150 . + . ID=gene-D8M19_05095;Name=D8M19_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05095 RBLY01000004.1 Protein Homology CDS 62872 66150 . + 0 ID=cds-RUP93462.1;Parent=gene-D8M19_05095;Dbxref=NCBI_GP:RUP93462.1;Name=RUP93462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296947.1;locus_tag=D8M19_05095;product=AAA family ATPase;protein_id=RUP93462.1;transl_table=11 RBLY01000004.1 Genbank gene 66264 66452 . + . ID=gene-D8M19_05100;Name=D8M19_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05100 RBLY01000004.1 Protein Homology CDS 66264 66452 . + 0 ID=cds-RUP93463.1;Parent=gene-D8M19_05100;Dbxref=NCBI_GP:RUP93463.1;Name=RUP93463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019247.1;locus_tag=D8M19_05100;product=hypothetical protein;protein_id=RUP93463.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 66501 66875 . - . ID=gene-D8M19_05105;Name=D8M19_05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05105;pseudo=true RBLY01000004.1 Protein Homology CDS 66501 66875 . - 0 ID=cds-D8M19_05105;Parent=gene-D8M19_05105;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295527.1;locus_tag=D8M19_05105;product=DNA primase;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 66872 67060 . - . ID=gene-D8M19_05110;Name=D8M19_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05110 RBLY01000004.1 GeneMarkS+ CDS 66872 67060 . - 0 ID=cds-RUP93464.1;Parent=gene-D8M19_05110;Dbxref=NCBI_GP:RUP93464.1;Name=RUP93464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05110;product=hypothetical protein;protein_id=RUP93464.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 67057 67399 . - . ID=gene-D8M19_05115;Name=D8M19_05115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05115;pseudo=true RBLY01000004.1 Protein Homology CDS 67057 67399 . - 0 ID=cds-D8M19_05115;Parent=gene-D8M19_05115;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005295523.1;locus_tag=D8M19_05115;product=BRO family protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 67625 68560 . + . ID=gene-D8M19_05120;Name=D8M19_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05120 RBLY01000004.1 Protein Homology CDS 67625 68560 . + 0 ID=cds-RUP93465.1;Parent=gene-D8M19_05120;Dbxref=NCBI_GP:RUP93465.1;Name=RUP93465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004014186.1;locus_tag=D8M19_05120;product=Abi family protein;protein_id=RUP93465.1;transl_table=11 RBLY01000004.1 Genbank gene 69218 69397 . - . ID=gene-D8M19_05125;Name=D8M19_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05125 RBLY01000004.1 Protein Homology CDS 69218 69397 . - 0 ID=cds-RUP93466.1;Parent=gene-D8M19_05125;Dbxref=NCBI_GP:RUP93466.1;Name=RUP93466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389139.1;locus_tag=D8M19_05125;product=transposase;protein_id=RUP93466.1;transl_table=11 RBLY01000004.1 Genbank gene 69394 69534 . - . ID=gene-D8M19_05130;Name=D8M19_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05130 RBLY01000004.1 Protein Homology CDS 69394 69534 . - 0 ID=cds-RUP93467.1;Parent=gene-D8M19_05130;Dbxref=NCBI_GP:RUP93467.1;Name=RUP93467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01527.18;locus_tag=D8M19_05130;product=hypothetical protein;protein_id=RUP93467.1;transl_table=11 RBLY01000004.1 Genbank gene 69665 70069 . + . ID=gene-D8M19_05135;Name=D8M19_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05135 RBLY01000004.1 Protein Homology CDS 69665 70069 . + 0 ID=cds-RUP93468.1;Parent=gene-D8M19_05135;Dbxref=NCBI_GP:RUP93468.1;Name=RUP93468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12008.6;locus_tag=D8M19_05135;product=hypothetical protein;protein_id=RUP93468.1;transl_table=11 RBLY01000004.1 Genbank gene 70114 70845 . - . ID=gene-D8M19_05140;Name=D8M19_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05140 RBLY01000004.1 GeneMarkS+ CDS 70114 70845 . - 0 ID=cds-RUP93469.1;Parent=gene-D8M19_05140;Dbxref=NCBI_GP:RUP93469.1;Name=RUP93469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05140;product=hypothetical protein;protein_id=RUP93469.1;transl_table=11 RBLY01000004.1 Genbank gene 70908 72674 . - . ID=gene-D8M19_05145;Name=D8M19_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05145 RBLY01000004.1 Protein Homology CDS 70908 72674 . - 0 ID=cds-RUP93470.1;Parent=gene-D8M19_05145;Dbxref=NCBI_GP:RUP93470.1;Name=RUP93470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08310.9;locus_tag=D8M19_05145;product=hypothetical protein;protein_id=RUP93470.1;transl_table=11 RBLY01000004.1 Genbank gene 72863 73663 . - . ID=gene-D8M19_05150;Name=D8M19_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05150 RBLY01000004.1 GeneMarkS+ CDS 72863 73663 . - 0 ID=cds-RUP93471.1;Parent=gene-D8M19_05150;Dbxref=NCBI_GP:RUP93471.1;Name=RUP93471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05150;product=hypothetical protein;protein_id=RUP93471.1;transl_table=11 RBLY01000004.1 Genbank gene 73774 74526 . - . ID=gene-D8M19_05155;Name=D8M19_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05155 RBLY01000004.1 Protein Homology CDS 73774 74526 . - 0 ID=cds-RUP93472.1;Parent=gene-D8M19_05155;Dbxref=NCBI_GP:RUP93472.1;Name=RUP93472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022882.1;locus_tag=D8M19_05155;product=NAD-dependent deacylase;protein_id=RUP93472.1;transl_table=11 RBLY01000004.1 Genbank gene 74596 74859 . - . ID=gene-D8M19_05160;Name=D8M19_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05160 RBLY01000004.1 Protein Homology CDS 74596 74859 . - 0 ID=cds-RUP93606.1;Parent=gene-D8M19_05160;Dbxref=NCBI_GP:RUP93606.1;Name=RUP93606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121399.1;locus_tag=D8M19_05160;product=hypothetical protein;protein_id=RUP93606.1;transl_table=11 RBLY01000004.1 Genbank gene 75079 77616 . + . ID=gene-D8M19_05165;Name=D8M19_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05165 RBLY01000004.1 Protein Homology CDS 75079 77616 . + 0 ID=cds-RUP93473.1;Parent=gene-D8M19_05165;Dbxref=NCBI_GP:RUP93473.1;Name=RUP93473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121400.1;locus_tag=D8M19_05165;product=nitric-oxide reductase large subunit;protein_id=RUP93473.1;transl_table=11 RBLY01000004.1 Genbank gene 77632 78420 . + . ID=gene-D8M19_05170;Name=D8M19_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05170 RBLY01000004.1 Protein Homology CDS 77632 78420 . + 0 ID=cds-RUP93474.1;Parent=gene-D8M19_05170;Dbxref=NCBI_GP:RUP93474.1;Name=RUP93474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121401.1;locus_tag=D8M19_05170;product=hypothetical protein;protein_id=RUP93474.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 78470 79207 . + . ID=gene-D8M19_05175;Name=D8M19_05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05175;pseudo=true RBLY01000004.1 Protein Homology CDS 78470 79207 . + 0 ID=cds-D8M19_05175;Parent=gene-D8M19_05175;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011725813.1;locus_tag=D8M19_05175;product=slipin family protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 79493 79681 . - . ID=gene-D8M19_05180;Name=D8M19_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05180 RBLY01000004.1 Protein Homology CDS 79493 79681 . - 0 ID=cds-RUP93607.1;Parent=gene-D8M19_05180;Dbxref=NCBI_GP:RUP93607.1;Name=RUP93607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009393126.1;locus_tag=D8M19_05180;product=hypothetical protein;protein_id=RUP93607.1;transl_table=11 RBLY01000004.1 Genbank gene 80097 80705 . + . ID=gene-D8M19_05185;Name=D8M19_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05185 RBLY01000004.1 GeneMarkS+ CDS 80097 80705 . + 0 ID=cds-RUP93475.1;Parent=gene-D8M19_05185;Dbxref=NCBI_GP:RUP93475.1;Name=RUP93475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05185;product=hypothetical protein;protein_id=RUP93475.1;transl_table=11 RBLY01000004.1 Genbank gene 80871 81320 . + . ID=gene-D8M19_05190;Name=D8M19_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05190 RBLY01000004.1 Protein Homology CDS 80871 81320 . + 0 ID=cds-RUP93476.1;Parent=gene-D8M19_05190;Dbxref=NCBI_GP:RUP93476.1;Name=RUP93476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121409.1;locus_tag=D8M19_05190;product=hypothetical protein;protein_id=RUP93476.1;transl_table=11 RBLY01000004.1 Genbank gene 81317 82897 . + . ID=gene-D8M19_05195;Name=D8M19_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05195 RBLY01000004.1 Protein Homology CDS 81317 82897 . + 0 ID=cds-RUP93477.1;Parent=gene-D8M19_05195;Dbxref=NCBI_GP:RUP93477.1;Name=RUP93477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03703.12;locus_tag=D8M19_05195;product=hypothetical protein;protein_id=RUP93477.1;transl_table=11 RBLY01000004.1 Genbank gene 82894 83364 . - . ID=gene-D8M19_05200;Name=D8M19_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05200 RBLY01000004.1 Protein Homology CDS 82894 83364 . - 0 ID=cds-RUP93478.1;Parent=gene-D8M19_05200;Dbxref=NCBI_GP:RUP93478.1;Name=RUP93478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277253.1;locus_tag=D8M19_05200;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=RUP93478.1;transl_table=11 RBLY01000004.1 Genbank gene 83388 84239 . + . ID=gene-D8M19_05205;Name=D8M19_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05205 RBLY01000004.1 Protein Homology CDS 83388 84239 . + 0 ID=cds-RUP93608.1;Parent=gene-D8M19_05205;Dbxref=NCBI_GP:RUP93608.1;Name=RUP93608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400054.1;locus_tag=D8M19_05205;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=RUP93608.1;transl_table=11 RBLY01000004.1 Genbank gene 84229 84645 . + . ID=gene-D8M19_05210;Name=D8M19_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05210 RBLY01000004.1 Protein Homology CDS 84229 84645 . + 0 ID=cds-RUP93479.1;Parent=gene-D8M19_05210;Dbxref=NCBI_GP:RUP93479.1;Name=RUP93479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121413.1;locus_tag=D8M19_05210;product=DUF3017 domain-containing protein;protein_id=RUP93479.1;transl_table=11 RBLY01000004.1 Genbank gene 84704 86086 . + . ID=gene-D8M19_05215;Name=D8M19_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05215 RBLY01000004.1 Protein Homology CDS 84704 86086 . + 0 ID=cds-RUP93609.1;Parent=gene-D8M19_05215;Dbxref=NCBI_GP:RUP93609.1;Name=RUP93609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326645.1;locus_tag=D8M19_05215;product=GntP family permease;protein_id=RUP93609.1;transl_table=11 RBLY01000004.1 Genbank gene 86073 86546 . - . ID=gene-D8M19_05220;Name=D8M19_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05220 RBLY01000004.1 Protein Homology CDS 86073 86546 . - 0 ID=cds-RUP93610.1;Parent=gene-D8M19_05220;Dbxref=NCBI_GP:RUP93610.1;Name=RUP93610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014835787.1;locus_tag=D8M19_05220;product=gluconokinase;protein_id=RUP93610.1;transl_table=11 RBLY01000004.1 Genbank gene 86624 87727 . - . ID=gene-D8M19_05225;Name=D8M19_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05225 RBLY01000004.1 GeneMarkS+ CDS 86624 87727 . - 0 ID=cds-RUP93480.1;Parent=gene-D8M19_05225;Dbxref=NCBI_GP:RUP93480.1;Name=RUP93480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05225;product=hypothetical protein;protein_id=RUP93480.1;transl_table=11 RBLY01000004.1 Genbank gene 87850 88968 . - . ID=gene-D8M19_05230;Name=D8M19_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05230 RBLY01000004.1 Protein Homology CDS 87850 88968 . - 0 ID=cds-RUP93481.1;Parent=gene-D8M19_05230;Dbxref=NCBI_GP:RUP93481.1;Name=RUP93481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121419.1;locus_tag=D8M19_05230;product=homoserine O-acetyltransferase;protein_id=RUP93481.1;transl_table=11 RBLY01000004.1 Genbank gene 89211 90563 . + . ID=gene-D8M19_05235;Name=D8M19_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05235 RBLY01000004.1 Protein Homology CDS 89211 90563 . + 0 ID=cds-RUP93482.1;Parent=gene-D8M19_05235;Dbxref=NCBI_GP:RUP93482.1;Name=RUP93482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121420.1;locus_tag=D8M19_05235;product=amino acid permease;protein_id=RUP93482.1;transl_table=11 RBLY01000004.1 Genbank gene 90878 93094 . - . ID=gene-D8M19_05240;Name=D8M19_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05240 RBLY01000004.1 Protein Homology CDS 90878 93094 . - 0 ID=cds-RUP93483.1;Parent=gene-D8M19_05240;Dbxref=NCBI_GP:RUP93483.1;Name=RUP93483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189398.1;locus_tag=D8M19_05240;product=NADP-dependent isocitrate dehydrogenase;protein_id=RUP93483.1;transl_table=11 RBLY01000004.1 Genbank gene 93395 94555 . + . ID=gene-D8M19_05245;Name=D8M19_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05245 RBLY01000004.1 Protein Homology CDS 93395 94555 . + 0 ID=cds-RUP93484.1;Parent=gene-D8M19_05245;Dbxref=NCBI_GP:RUP93484.1;Name=RUP93484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121422.1;locus_tag=D8M19_05245;product=MFS transporter;protein_id=RUP93484.1;transl_table=11 RBLY01000004.1 Genbank gene 94604 95539 . + . ID=gene-D8M19_05250;Name=D8M19_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05250 RBLY01000004.1 Protein Homology CDS 94604 95539 . + 0 ID=cds-RUP93485.1;Parent=gene-D8M19_05250;Dbxref=NCBI_GP:RUP93485.1;Name=RUP93485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121423.1;locus_tag=D8M19_05250;product=exodeoxyribonuclease III;protein_id=RUP93485.1;transl_table=11 RBLY01000004.1 Genbank gene 95637 96416 . + . ID=gene-D8M19_05255;Name=D8M19_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05255 RBLY01000004.1 Protein Homology CDS 95637 96416 . + 0 ID=cds-RUP93486.1;Parent=gene-D8M19_05255;Dbxref=NCBI_GP:RUP93486.1;Name=RUP93486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121424.1;locus_tag=D8M19_05255;product=trimeric intracellular cation channel family protein;protein_id=RUP93486.1;transl_table=11 RBLY01000004.1 Genbank gene 96472 96663 . + . ID=gene-D8M19_05260;Name=D8M19_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05260 RBLY01000004.1 GeneMarkS+ CDS 96472 96663 . + 0 ID=cds-RUP93487.1;Parent=gene-D8M19_05260;Dbxref=NCBI_GP:RUP93487.1;Name=RUP93487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05260;product=hypothetical protein;protein_id=RUP93487.1;transl_table=11 RBLY01000004.1 Genbank gene 96771 97802 . + . ID=gene-D8M19_05265;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=D8M19_05265 RBLY01000004.1 Protein Homology CDS 96771 97802 . + 0 ID=cds-RUP93611.1;Parent=gene-D8M19_05265;Dbxref=NCBI_GP:RUP93611.1;Name=RUP93611.1;gbkey=CDS;gene=trpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121426.1;locus_tag=D8M19_05265;product=tryptophan--tRNA ligase;protein_id=RUP93611.1;transl_table=11 RBLY01000004.1 Genbank gene 97969 99057 . + . ID=gene-D8M19_05270;Name=D8M19_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05270 RBLY01000004.1 Protein Homology CDS 97969 99057 . + 0 ID=cds-RUP93488.1;Parent=gene-D8M19_05270;Dbxref=NCBI_GP:RUP93488.1;Name=RUP93488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121427.1;locus_tag=D8M19_05270;product=YihY family inner membrane protein;protein_id=RUP93488.1;transl_table=11 RBLY01000004.1 Genbank gene 99126 100529 . - . ID=gene-D8M19_05275;Name=D8M19_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05275 RBLY01000004.1 Protein Homology CDS 99126 100529 . - 0 ID=cds-RUP93489.1;Parent=gene-D8M19_05275;Dbxref=NCBI_GP:RUP93489.1;Name=RUP93489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121428.1;locus_tag=D8M19_05275;product=D-alanyl-D-alanine carboxypeptidase;protein_id=RUP93489.1;transl_table=11 RBLY01000004.1 Genbank gene 100684 101748 . + . ID=gene-D8M19_05280;Name=D8M19_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05280 RBLY01000004.1 GeneMarkS+ CDS 100684 101748 . + 0 ID=cds-RUP93490.1;Parent=gene-D8M19_05280;Dbxref=NCBI_GP:RUP93490.1;Name=RUP93490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05280;product=adenosine deaminase;protein_id=RUP93490.1;transl_table=11 RBLY01000004.1 Genbank gene 101745 102995 . - . ID=gene-D8M19_05285;Name=D8M19_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05285 RBLY01000004.1 Protein Homology CDS 101745 102995 . - 0 ID=cds-RUP93491.1;Parent=gene-D8M19_05285;Dbxref=NCBI_GP:RUP93491.1;Name=RUP93491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849695.1;locus_tag=D8M19_05285;product=hypothetical protein;protein_id=RUP93491.1;transl_table=11 RBLY01000004.1 Genbank gene 103129 103791 . - . ID=gene-D8M19_05290;Name=D8M19_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05290 RBLY01000004.1 Protein Homology CDS 103129 103791 . - 0 ID=cds-RUP93612.1;Parent=gene-D8M19_05290;Dbxref=NCBI_GP:RUP93612.1;Name=RUP93612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021175.1;locus_tag=D8M19_05290;product=peptidoglycan endopeptidase;protein_id=RUP93612.1;transl_table=11 RBLY01000004.1 Genbank gene 104158 104529 . - . ID=gene-D8M19_05295;Name=D8M19_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05295 RBLY01000004.1 GeneMarkS+ CDS 104158 104529 . - 0 ID=cds-RUP93492.1;Parent=gene-D8M19_05295;Dbxref=NCBI_GP:RUP93492.1;Name=RUP93492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05295;product=hypothetical protein;protein_id=RUP93492.1;transl_table=11 RBLY01000004.1 Genbank gene 104619 105254 . + . ID=gene-D8M19_05300;Name=D8M19_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05300 RBLY01000004.1 Protein Homology CDS 104619 105254 . + 0 ID=cds-RUP93613.1;Parent=gene-D8M19_05300;Dbxref=NCBI_GP:RUP93613.1;Name=RUP93613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189385.1;locus_tag=D8M19_05300;product=uracil phosphoribosyltransferase;protein_id=RUP93613.1;transl_table=11 RBLY01000004.1 Genbank gene 105473 105934 . + . ID=gene-D8M19_05305;Name=D8M19_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05305 RBLY01000004.1 Protein Homology CDS 105473 105934 . + 0 ID=cds-RUP93493.1;Parent=gene-D8M19_05305;Dbxref=NCBI_GP:RUP93493.1;Name=RUP93493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018017604.1;locus_tag=D8M19_05305;product=XRE family transcriptional regulator;protein_id=RUP93493.1;transl_table=11 RBLY01000004.1 Genbank gene 106042 107232 . + . ID=gene-D8M19_05310;Name=D8M19_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05310 RBLY01000004.1 Protein Homology CDS 106042 107232 . + 0 ID=cds-RUP93494.1;Parent=gene-D8M19_05310;Dbxref=NCBI_GP:RUP93494.1;Name=RUP93494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121435.1;locus_tag=D8M19_05310;product=amidohydrolase;protein_id=RUP93494.1;transl_table=11 RBLY01000004.1 Genbank gene 107414 108841 . + . ID=gene-D8M19_05315;Name=D8M19_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05315 RBLY01000004.1 Protein Homology CDS 107414 108841 . + 0 ID=cds-RUP93495.1;Parent=gene-D8M19_05315;Dbxref=NCBI_GP:RUP93495.1;Name=RUP93495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849681.1;locus_tag=D8M19_05315;product=NAD(P)H-quinone dehydrogenase;protein_id=RUP93495.1;transl_table=11 RBLY01000004.1 Genbank gene 109007 112435 . + . ID=gene-D8M19_05320;Name=D8M19_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05320 RBLY01000004.1 Protein Homology CDS 109007 112435 . + 0 ID=cds-RUP93496.1;Parent=gene-D8M19_05320;Dbxref=NCBI_GP:RUP93496.1;Name=RUP93496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121437.1;locus_tag=D8M19_05320;product=pyruvate carboxylase;protein_id=RUP93496.1;transl_table=11 RBLY01000004.1 Genbank gene 112467 113417 . - . ID=gene-D8M19_05325;Name=D8M19_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05325 RBLY01000004.1 Protein Homology CDS 112467 113417 . - 0 ID=cds-RUP93497.1;Parent=gene-D8M19_05325;Dbxref=NCBI_GP:RUP93497.1;Name=RUP93497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01497.16;locus_tag=D8M19_05325;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP93497.1;transl_table=11 RBLY01000004.1 Genbank gene 113818 114318 . - . ID=gene-D8M19_05330;Name=D8M19_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05330 RBLY01000004.1 Protein Homology CDS 113818 114318 . - 0 ID=cds-RUP93498.1;Parent=gene-D8M19_05330;Dbxref=NCBI_GP:RUP93498.1;Name=RUP93498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121439.1;locus_tag=D8M19_05330;product=GNAT family N-acetyltransferase;protein_id=RUP93498.1;transl_table=11 RBLY01000004.1 Genbank gene 114378 116156 . - . ID=gene-D8M19_05335;Name=D8M19_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05335 RBLY01000004.1 Protein Homology CDS 114378 116156 . - 0 ID=cds-RUP93499.1;Parent=gene-D8M19_05335;Dbxref=NCBI_GP:RUP93499.1;Name=RUP93499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189359.1;locus_tag=D8M19_05335;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=RUP93499.1;transl_table=11 RBLY01000004.1 Genbank gene 116320 117210 . - . ID=gene-D8M19_05340;Name=D8M19_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05340 RBLY01000004.1 Protein Homology CDS 116320 117210 . - 0 ID=cds-RUP93500.1;Parent=gene-D8M19_05340;Dbxref=NCBI_GP:RUP93500.1;Name=RUP93500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858271.1;locus_tag=D8M19_05340;product=sulfurtransferase;protein_id=RUP93500.1;transl_table=11 RBLY01000004.1 Genbank gene 117331 118485 . + . ID=gene-D8M19_05345;Name=D8M19_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05345 RBLY01000004.1 Protein Homology CDS 117331 118485 . + 0 ID=cds-RUP93614.1;Parent=gene-D8M19_05345;Dbxref=NCBI_GP:RUP93614.1;Name=RUP93614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836057.1;locus_tag=D8M19_05345;product=hypothetical protein;protein_id=RUP93614.1;transl_table=11 RBLY01000004.1 Genbank gene 118503 118985 . - . ID=gene-D8M19_05350;Name=D8M19_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05350 RBLY01000004.1 Protein Homology CDS 118503 118985 . - 0 ID=cds-RUP93615.1;Parent=gene-D8M19_05350;Dbxref=NCBI_GP:RUP93615.1;Name=RUP93615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121443.1;locus_tag=D8M19_05350;product=DUF3151 domain-containing protein;protein_id=RUP93615.1;transl_table=11 RBLY01000004.1 Genbank gene 119045 119692 . - . ID=gene-D8M19_05355;Name=D8M19_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05355 RBLY01000004.1 Protein Homology CDS 119045 119692 . - 0 ID=cds-RUP93501.1;Parent=gene-D8M19_05355;Dbxref=NCBI_GP:RUP93501.1;Name=RUP93501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599937.1;locus_tag=D8M19_05355;product=septum formation inhibitor Maf;protein_id=RUP93501.1;transl_table=11 RBLY01000004.1 Genbank gene 119676 119939 . - . ID=gene-D8M19_05360;Name=D8M19_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05360 RBLY01000004.1 Protein Homology CDS 119676 119939 . - 0 ID=cds-RUP93502.1;Parent=gene-D8M19_05360;Dbxref=NCBI_GP:RUP93502.1;Name=RUP93502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13822.4;locus_tag=D8M19_05360;product=acyl-CoA carboxylase subunit epsilon;protein_id=RUP93502.1;transl_table=11 RBLY01000004.1 Genbank gene 119926 121518 . - . ID=gene-D8M19_05365;Name=D8M19_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05365 RBLY01000004.1 Protein Homology CDS 119926 121518 . - 0 ID=cds-RUP93503.1;Parent=gene-D8M19_05365;Dbxref=NCBI_GP:RUP93503.1;Name=RUP93503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121446.1;locus_tag=D8M19_05365;product=acyl-CoA carboxylase subunit beta;protein_id=RUP93503.1;transl_table=11 RBLY01000004.1 Genbank gene 121571 121789 . - . ID=gene-D8M19_05370;Name=D8M19_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05370 RBLY01000004.1 Protein Homology CDS 121571 121789 . - 0 ID=cds-RUP93504.1;Parent=gene-D8M19_05370;Dbxref=NCBI_GP:RUP93504.1;Name=RUP93504.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13822.4;locus_tag=D8M19_05370;product=acyl-CoA carboxylase subunit epsilon;protein_id=RUP93504.1;transl_table=11 RBLY01000004.1 Genbank gene 121843 123462 . - . ID=gene-D8M19_05375;Name=D8M19_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05375 RBLY01000004.1 Protein Homology CDS 121843 123462 . - 0 ID=cds-RUP93505.1;Parent=gene-D8M19_05375;Dbxref=NCBI_GP:RUP93505.1;Name=RUP93505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599940.1;locus_tag=D8M19_05375;product=acyl-CoA carboxylase subunit beta;protein_id=RUP93505.1;transl_table=11 RBLY01000004.1 Genbank gene 123788 124588 . - . ID=gene-D8M19_05380;Name=D8M19_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05380 RBLY01000004.1 Protein Homology CDS 123788 124588 . - 0 ID=cds-RUP93616.1;Parent=gene-D8M19_05380;Dbxref=NCBI_GP:RUP93616.1;Name=RUP93616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599955.1;locus_tag=D8M19_05380;product=carbohydrate ABC transporter permease;protein_id=RUP93616.1;transl_table=11 RBLY01000004.1 Genbank gene 124661 125719 . - . ID=gene-D8M19_05385;Name=D8M19_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05385 RBLY01000004.1 Protein Homology CDS 124661 125719 . - 0 ID=cds-RUP93506.1;Parent=gene-D8M19_05385;Dbxref=NCBI_GP:RUP93506.1;Name=RUP93506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062518.1;locus_tag=D8M19_05385;product=sugar ABC transporter permease;protein_id=RUP93506.1;transl_table=11 RBLY01000004.1 Genbank gene 125721 127025 . - . ID=gene-D8M19_05390;Name=D8M19_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05390 RBLY01000004.1 Protein Homology CDS 125721 127025 . - 0 ID=cds-RUP93617.1;Parent=gene-D8M19_05390;Dbxref=NCBI_GP:RUP93617.1;Name=RUP93617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599958.1;locus_tag=D8M19_05390;product=ABC transporter substrate-binding protein;protein_id=RUP93617.1;transl_table=11 RBLY01000004.1 Genbank gene 127217 128341 . - . ID=gene-D8M19_05395;Name=D8M19_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05395 RBLY01000004.1 Protein Homology CDS 127217 128341 . - 0 ID=cds-RUP93507.1;Parent=gene-D8M19_05395;Dbxref=NCBI_GP:RUP93507.1;Name=RUP93507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581527.1;locus_tag=D8M19_05395;product=ABC transporter ATP-binding protein;protein_id=RUP93507.1;transl_table=11 RBLY01000004.1 Genbank gene 128374 129123 . + . ID=gene-D8M19_05400;Name=D8M19_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05400 RBLY01000004.1 Protein Homology CDS 128374 129123 . + 0 ID=cds-RUP93508.1;Parent=gene-D8M19_05400;Dbxref=NCBI_GP:RUP93508.1;Name=RUP93508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121455.1;locus_tag=D8M19_05400;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=RUP93508.1;transl_table=11 RBLY01000004.1 Genbank gene 129132 129638 . + . ID=gene-D8M19_05405;Name=D8M19_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05405 RBLY01000004.1 Protein Homology CDS 129132 129638 . + 0 ID=cds-RUP93618.1;Parent=gene-D8M19_05405;Dbxref=NCBI_GP:RUP93618.1;Name=RUP93618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016829817.1;locus_tag=D8M19_05405;product=hypothetical protein;protein_id=RUP93618.1;transl_table=11 RBLY01000004.1 Genbank gene 129798 131045 . + . ID=gene-D8M19_05410;Name=D8M19_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05410 RBLY01000004.1 Protein Homology CDS 129798 131045 . + 0 ID=cds-RUP93619.1;Parent=gene-D8M19_05410;Dbxref=NCBI_GP:RUP93619.1;Name=RUP93619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062542.1;locus_tag=D8M19_05410;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=RUP93619.1;transl_table=11 RBLY01000004.1 Genbank gene 131122 131670 . + . ID=gene-D8M19_05415;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=D8M19_05415 RBLY01000004.1 Protein Homology CDS 131122 131670 . + 0 ID=cds-RUP93509.1;Parent=gene-D8M19_05415;Dbxref=NCBI_GP:RUP93509.1;Name=RUP93509.1;gbkey=CDS;gene=purE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599946.1;locus_tag=D8M19_05415;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=RUP93509.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 131854 132774 . + . ID=gene-D8M19_05420;Name=D8M19_05420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05420;pseudo=true RBLY01000004.1 Protein Homology CDS 131854 132774 . + 0 ID=cds-D8M19_05420;Parent=gene-D8M19_05420;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401556.1;locus_tag=D8M19_05420;product=bile acid:sodium symporter family protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 132909 134558 . + . ID=gene-D8M19_05425;Name=D8M19_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05425 RBLY01000004.1 Protein Homology CDS 132909 134558 . + 0 ID=cds-RUP93510.1;Parent=gene-D8M19_05425;Dbxref=NCBI_GP:RUP93510.1;Name=RUP93510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121461.1;locus_tag=D8M19_05425;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=RUP93510.1;transl_table=11 RBLY01000004.1 Genbank gene 134832 136148 . + . ID=gene-D8M19_05430;Name=D8M19_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05430 RBLY01000004.1 Protein Homology CDS 134832 136148 . + 0 ID=cds-RUP93511.1;Parent=gene-D8M19_05430;Dbxref=NCBI_GP:RUP93511.1;Name=RUP93511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121463.1;locus_tag=D8M19_05430;product=alpha/beta fold hydrolase;protein_id=RUP93511.1;transl_table=11 RBLY01000004.1 Genbank gene 136186 137691 . - . ID=gene-D8M19_05435;Name=D8M19_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05435 RBLY01000004.1 Protein Homology CDS 136186 137691 . - 0 ID=cds-RUP93620.1;Parent=gene-D8M19_05435;Dbxref=NCBI_GP:RUP93620.1;Name=RUP93620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821378.1;locus_tag=D8M19_05435;product=ABC transporter ATP-binding protein;protein_id=RUP93620.1;transl_table=11 RBLY01000004.1 Genbank gene 137712 138548 . - . ID=gene-D8M19_05440;Name=D8M19_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05440 RBLY01000004.1 Protein Homology CDS 137712 138548 . - 0 ID=cds-RUP93512.1;Parent=gene-D8M19_05440;Dbxref=NCBI_GP:RUP93512.1;Name=RUP93512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121465.1;locus_tag=D8M19_05440;product=ABC transporter permease;protein_id=RUP93512.1;transl_table=11 RBLY01000004.1 Genbank gene 138545 139507 . - . ID=gene-D8M19_05445;Name=D8M19_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05445 RBLY01000004.1 Protein Homology CDS 138545 139507 . - 0 ID=cds-RUP93513.1;Parent=gene-D8M19_05445;Dbxref=NCBI_GP:RUP93513.1;Name=RUP93513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296077.1;locus_tag=D8M19_05445;product=ABC transporter permease;protein_id=RUP93513.1;transl_table=11 RBLY01000004.1 Genbank gene 139504 141036 . - . ID=gene-D8M19_05450;Name=D8M19_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05450 RBLY01000004.1 Protein Homology CDS 139504 141036 . - 0 ID=cds-RUP93514.1;Parent=gene-D8M19_05450;Dbxref=NCBI_GP:RUP93514.1;Name=RUP93514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296076.1;locus_tag=D8M19_05450;product=ABC transporter substrate-binding protein;protein_id=RUP93514.1;transl_table=11 RBLY01000004.1 Genbank gene 141067 142119 . - . ID=gene-D8M19_05455;Name=D8M19_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05455 RBLY01000004.1 Protein Homology CDS 141067 142119 . - 0 ID=cds-RUP93515.1;Parent=gene-D8M19_05455;Dbxref=NCBI_GP:RUP93515.1;Name=RUP93515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849353.1;locus_tag=D8M19_05455;product=LLM class flavin-dependent oxidoreductase;protein_id=RUP93515.1;transl_table=11 RBLY01000004.1 Genbank gene 142173 143576 . - . ID=gene-D8M19_05460;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=D8M19_05460 RBLY01000004.1 Protein Homology CDS 142173 143576 . - 0 ID=cds-RUP93516.1;Parent=gene-D8M19_05460;Dbxref=NCBI_GP:RUP93516.1;Name=RUP93516.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121469.1;locus_tag=D8M19_05460;product=branched-chain amino acid transport system II carrier protein;protein_id=RUP93516.1;transl_table=11 RBLY01000004.1 Genbank gene 143683 144831 . - . ID=gene-D8M19_05465;Name=D8M19_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05465 RBLY01000004.1 Protein Homology CDS 143683 144831 . - 0 ID=cds-RUP93621.1;Parent=gene-D8M19_05465;Dbxref=NCBI_GP:RUP93621.1;Name=RUP93621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401518.1;locus_tag=D8M19_05465;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=RUP93621.1;transl_table=11 RBLY01000004.1 Genbank gene 144936 146798 . - . ID=gene-D8M19_05470;Name=D8M19_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05470 RBLY01000004.1 Protein Homology CDS 144936 146798 . - 0 ID=cds-RUP93622.1;Parent=gene-D8M19_05470;Dbxref=NCBI_GP:RUP93622.1;Name=RUP93622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121471.1;locus_tag=D8M19_05470;product=ABC transporter ATP-binding protein;protein_id=RUP93622.1;transl_table=11 RBLY01000004.1 Genbank gene 147184 147615 . + . ID=gene-D8M19_05475;Name=D8M19_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05475 RBLY01000004.1 Protein Homology CDS 147184 147615 . + 0 ID=cds-RUP93623.1;Parent=gene-D8M19_05475;Dbxref=NCBI_GP:RUP93623.1;Name=RUP93623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849344.1;locus_tag=D8M19_05475;product=hypothetical protein;protein_id=RUP93623.1;transl_table=11 RBLY01000004.1 Genbank gene 147726 149057 . - . ID=gene-D8M19_05480;Name=D8M19_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05480 RBLY01000004.1 Protein Homology CDS 147726 149057 . - 0 ID=cds-RUP93517.1;Parent=gene-D8M19_05480;Dbxref=NCBI_GP:RUP93517.1;Name=RUP93517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07859.11;locus_tag=D8M19_05480;product=carboxylesterase/lipase family protein;protein_id=RUP93517.1;transl_table=11 RBLY01000004.1 Genbank gene 149061 149825 . - . ID=gene-D8M19_05485;Name=D8M19_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05485 RBLY01000004.1 GeneMarkS+ CDS 149061 149825 . - 0 ID=cds-RUP93518.1;Parent=gene-D8M19_05485;Dbxref=NCBI_GP:RUP93518.1;Name=RUP93518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05485;product=hypothetical protein;protein_id=RUP93518.1;transl_table=11 RBLY01000004.1 Genbank gene 149831 151489 . - . ID=gene-D8M19_05490;Name=D8M19_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05490 RBLY01000004.1 Protein Homology CDS 149831 151489 . - 0 ID=cds-RUP93519.1;Parent=gene-D8M19_05490;Dbxref=NCBI_GP:RUP93519.1;Name=RUP93519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08310.9;locus_tag=D8M19_05490;product=hypothetical protein;protein_id=RUP93519.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 151937 152527 . + . ID=gene-D8M19_05495;Name=D8M19_05495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05495;pseudo=true RBLY01000004.1 Protein Homology CDS 151937 152527 . + 0 ID=cds-D8M19_05495;Parent=gene-D8M19_05495;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016421854.1;locus_tag=D8M19_05495;product=ISL3 family transposase;pseudo=true;transl_table=11 RBLY01000004.1 Genbank pseudogene 153390 154732 . - . ID=gene-D8M19_05500;Name=D8M19_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05500;pseudo=true RBLY01000004.1 Protein Homology CDS 153390 154732 . - 0 ID=cds-D8M19_05500;Parent=gene-D8M19_05500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006680457.1;locus_tag=D8M19_05500;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 155078 155332 . + . ID=gene-D8M19_05505;Name=D8M19_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05505 RBLY01000004.1 Protein Homology CDS 155078 155332 . + 0 ID=cds-RUP93520.1;Parent=gene-D8M19_05505;Dbxref=NCBI_GP:RUP93520.1;Name=RUP93520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005389272.1;locus_tag=D8M19_05505;product=hypothetical protein;protein_id=RUP93520.1;transl_table=11 RBLY01000004.1 Genbank gene 155626 157455 . + . ID=gene-D8M19_05510;Name=D8M19_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05510 RBLY01000004.1 Protein Homology CDS 155626 157455 . + 0 ID=cds-RUP93521.1;Parent=gene-D8M19_05510;Dbxref=NCBI_GP:RUP93521.1;Name=RUP93521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120355.1;locus_tag=D8M19_05510;product=long-chain fatty acid--CoA ligase;protein_id=RUP93521.1;transl_table=11 RBLY01000004.1 Genbank gene 157748 158431 . + . ID=gene-D8M19_05515;Name=D8M19_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05515 RBLY01000004.1 Protein Homology CDS 157748 158431 . + 0 ID=cds-RUP93522.1;Parent=gene-D8M19_05515;Dbxref=NCBI_GP:RUP93522.1;Name=RUP93522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120356.1;locus_tag=D8M19_05515;product=hypothetical protein;protein_id=RUP93522.1;transl_table=11 RBLY01000004.1 Genbank gene 158454 159494 . - . ID=gene-D8M19_05520;Name=D8M19_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05520 RBLY01000004.1 Protein Homology CDS 158454 159494 . - 0 ID=cds-RUP93523.1;Parent=gene-D8M19_05520;Dbxref=NCBI_GP:RUP93523.1;Name=RUP93523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120357.1;locus_tag=D8M19_05520;product=DUF21 domain-containing protein;protein_id=RUP93523.1;transl_table=11 RBLY01000004.1 Genbank gene 159498 160958 . - . ID=gene-D8M19_05525;Name=D8M19_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05525 RBLY01000004.1 Protein Homology CDS 159498 160958 . - 0 ID=cds-RUP93524.1;Parent=gene-D8M19_05525;Dbxref=NCBI_GP:RUP93524.1;Name=RUP93524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120358.1;locus_tag=D8M19_05525;product=HlyC/CorC family transporter;protein_id=RUP93524.1;transl_table=11 RBLY01000004.1 Genbank gene 161198 162385 . + . ID=gene-D8M19_05530;Name=D8M19_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05530 RBLY01000004.1 Protein Homology CDS 161198 162385 . + 0 ID=cds-RUP93525.1;Parent=gene-D8M19_05530;Dbxref=NCBI_GP:RUP93525.1;Name=RUP93525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018020723.1;locus_tag=D8M19_05530;product=coproporphyrinogen III oxidase;protein_id=RUP93525.1;transl_table=11 RBLY01000004.1 Genbank gene 162385 163416 . + . ID=gene-D8M19_05535;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=D8M19_05535 RBLY01000004.1 Protein Homology CDS 162385 163416 . + 0 ID=cds-RUP93526.1;Parent=gene-D8M19_05535;Dbxref=NCBI_GP:RUP93526.1;Name=RUP93526.1;gbkey=CDS;gene=hrcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120360.1;locus_tag=D8M19_05535;product=heat-inducible transcriptional repressor HrcA;protein_id=RUP93526.1;transl_table=11 RBLY01000004.1 Genbank gene 163561 164706 . + . ID=gene-D8M19_05540;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D8M19_05540 RBLY01000004.1 Protein Homology CDS 163561 164706 . + 0 ID=cds-RUP93527.1;Parent=gene-D8M19_05540;Dbxref=NCBI_GP:RUP93527.1;Name=RUP93527.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120361.1;locus_tag=D8M19_05540;product=molecular chaperone DnaJ;protein_id=RUP93527.1;transl_table=11 RBLY01000004.1 Genbank gene 164737 165477 . + . ID=gene-D8M19_05545;Name=D8M19_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05545 RBLY01000004.1 Protein Homology CDS 164737 165477 . + 0 ID=cds-RUP93528.1;Parent=gene-D8M19_05545;Dbxref=NCBI_GP:RUP93528.1;Name=RUP93528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120362.1;locus_tag=D8M19_05545;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=RUP93528.1;transl_table=11 RBLY01000004.1 Genbank gene 165576 167192 . - . ID=gene-D8M19_05550;Name=D8M19_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05550 RBLY01000004.1 Protein Homology CDS 165576 167192 . - 0 ID=cds-RUP93529.1;Parent=gene-D8M19_05550;Dbxref=NCBI_GP:RUP93529.1;Name=RUP93529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189410.1;locus_tag=D8M19_05550;product=cytochrome c biogenesis protein DipZ;protein_id=RUP93529.1;transl_table=11 RBLY01000004.1 Genbank gene 167450 167704 . + . ID=gene-D8M19_05555;Name=D8M19_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05555 RBLY01000004.1 Protein Homology CDS 167450 167704 . + 0 ID=cds-RUP93624.1;Parent=gene-D8M19_05555;Dbxref=NCBI_GP:RUP93624.1;Name=RUP93624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309007.1;locus_tag=D8M19_05555;product=hypothetical protein;protein_id=RUP93624.1;transl_table=11 RBLY01000004.1 Genbank gene 167716 168297 . + . ID=gene-D8M19_05560;Name=D8M19_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05560 RBLY01000004.1 Protein Homology CDS 167716 168297 . + 0 ID=cds-RUP93530.1;Parent=gene-D8M19_05560;Dbxref=NCBI_GP:RUP93530.1;Name=RUP93530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010268922.1;locus_tag=D8M19_05560;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP93530.1;transl_table=11 RBLY01000004.1 Genbank gene 168305 169018 . + . ID=gene-D8M19_05565;Name=D8M19_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05565 RBLY01000004.1 Protein Homology CDS 168305 169018 . + 0 ID=cds-RUP93625.1;Parent=gene-D8M19_05565;Dbxref=NCBI_GP:RUP93625.1;Name=RUP93625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189407.1;locus_tag=D8M19_05565;product=anti-sigma factor;protein_id=RUP93625.1;transl_table=11 RBLY01000004.1 Genbank gene 169103 170062 . + . ID=gene-D8M19_05570;Name=D8M19_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05570 RBLY01000004.1 Protein Homology CDS 169103 170062 . + 0 ID=cds-RUP93531.1;Parent=gene-D8M19_05570;Dbxref=NCBI_GP:RUP93531.1;Name=RUP93531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190773.1;locus_tag=D8M19_05570;product=PhoH family protein;protein_id=RUP93531.1;transl_table=11 RBLY01000004.1 Genbank gene 170153 170818 . + . ID=gene-D8M19_05575;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=D8M19_05575 RBLY01000004.1 Protein Homology CDS 170153 170818 . + 0 ID=cds-RUP93532.1;Parent=gene-D8M19_05575;Dbxref=NCBI_GP:RUP93532.1;Name=RUP93532.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401498.1;locus_tag=D8M19_05575;product=rRNA maturation RNase YbeY;protein_id=RUP93532.1;transl_table=11 RBLY01000004.1 Genbank gene 170909 171784 . + . ID=gene-D8M19_05580;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=D8M19_05580 RBLY01000004.1 Protein Homology CDS 170909 171784 . + 0 ID=cds-RUP93626.1;Parent=gene-D8M19_05580;Dbxref=NCBI_GP:RUP93626.1;Name=RUP93626.1;gbkey=CDS;gene=pdxY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822350.1;locus_tag=D8M19_05580;product=pyridoxal kinase PdxY;protein_id=RUP93626.1;transl_table=11 RBLY01000004.1 Genbank gene 171788 172714 . + . ID=gene-D8M19_05585;Name=D8M19_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05585 RBLY01000004.1 Protein Homology CDS 171788 172714 . + 0 ID=cds-RUP93533.1;Parent=gene-D8M19_05585;Dbxref=NCBI_GP:RUP93533.1;Name=RUP93533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120369.1;locus_tag=D8M19_05585;product=GTPase Era;protein_id=RUP93533.1;transl_table=11 RBLY01000004.1 Genbank gene 172718 173458 . + . ID=gene-D8M19_05590;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=D8M19_05590 RBLY01000004.1 Protein Homology CDS 172718 173458 . + 0 ID=cds-RUP93534.1;Parent=gene-D8M19_05590;Dbxref=NCBI_GP:RUP93534.1;Name=RUP93534.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296048.1;locus_tag=D8M19_05590;product=DNA repair protein RecO;protein_id=RUP93534.1;transl_table=11 RBLY01000004.1 Genbank gene 173503 174240 . + . ID=gene-D8M19_05595;Name=D8M19_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05595 RBLY01000004.1 Protein Homology CDS 173503 174240 . + 0 ID=cds-RUP93535.1;Parent=gene-D8M19_05595;Dbxref=NCBI_GP:RUP93535.1;Name=RUP93535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120371.1;locus_tag=D8M19_05595;product=isoprenyl transferase;protein_id=RUP93535.1;transl_table=11 RBLY01000004.1 Genbank gene 174327 175616 . + . ID=gene-D8M19_05600;Name=D8M19_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05600 RBLY01000004.1 Protein Homology CDS 174327 175616 . + 0 ID=cds-RUP93536.1;Parent=gene-D8M19_05600;Dbxref=NCBI_GP:RUP93536.1;Name=RUP93536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822369.1;locus_tag=D8M19_05600;product=rubrerythrin family protein;protein_id=RUP93536.1;transl_table=11 RBLY01000004.1 Genbank gene 175727 176164 . - . ID=gene-D8M19_05605;Name=D8M19_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05605 RBLY01000004.1 Protein Homology CDS 175727 176164 . - 0 ID=cds-RUP93537.1;Parent=gene-D8M19_05605;Dbxref=NCBI_GP:RUP93537.1;Name=RUP93537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401490.1;locus_tag=D8M19_05605;product=transcriptional repressor;protein_id=RUP93537.1;transl_table=11 RBLY01000004.1 Genbank gene 176178 176465 . - . ID=gene-D8M19_05610;Name=D8M19_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05610 RBLY01000004.1 Protein Homology CDS 176178 176465 . - 0 ID=cds-RUP93538.1;Parent=gene-D8M19_05610;Dbxref=NCBI_GP:RUP93538.1;Name=RUP93538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120374.1;locus_tag=D8M19_05610;product=ArsR family transcriptional regulator;protein_id=RUP93538.1;transl_table=11 RBLY01000004.1 Genbank gene 176944 178323 . + . ID=gene-D8M19_05615;Name=D8M19_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05615 RBLY01000004.1 Protein Homology CDS 176944 178323 . + 0 ID=cds-RUP93539.1;Parent=gene-D8M19_05615;Dbxref=NCBI_GP:RUP93539.1;Name=RUP93539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822371.1;locus_tag=D8M19_05615;product=glycine--tRNA ligase;protein_id=RUP93539.1;transl_table=11 RBLY01000004.1 Genbank gene 178368 178955 . + . ID=gene-D8M19_05620;Name=D8M19_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05620 RBLY01000004.1 Protein Homology CDS 178368 178955 . + 0 ID=cds-RUP93540.1;Parent=gene-D8M19_05620;Dbxref=NCBI_GP:RUP93540.1;Name=RUP93540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278107.1;locus_tag=D8M19_05620;product=hypothetical protein;protein_id=RUP93540.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 178962 179057 . + . ID=gene-D8M19_05625;Name=D8M19_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05625;pseudo=true RBLY01000004.1 Protein Homology CDS 178962 179057 . + 0 ID=cds-D8M19_05625;Parent=gene-D8M19_05625;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011643797.1;locus_tag=D8M19_05625;product=DUF2497 domain-containing protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank pseudogene 180557 181234 . - . ID=gene-D8M19_05630;Name=D8M19_05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05630;pseudo=true RBLY01000004.1 Protein Homology CDS 180557 181234 . - 0 ID=cds-D8M19_05630;Parent=gene-D8M19_05630;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04536.12;locus_tag=D8M19_05630;product=TPM domain-containing protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 181399 182055 . + . ID=gene-D8M19_05635;Name=D8M19_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05635 RBLY01000004.1 Protein Homology CDS 181399 182055 . + 0 ID=cds-RUP93627.1;Parent=gene-D8M19_05635;Dbxref=NCBI_GP:RUP93627.1;Name=RUP93627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011265918.1;locus_tag=D8M19_05635;product=YdcF family protein;protein_id=RUP93627.1;transl_table=11 RBLY01000004.1 Genbank gene 182052 183422 . + . ID=gene-D8M19_05640;Name=D8M19_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05640 RBLY01000004.1 Protein Homology CDS 182052 183422 . + 0 ID=cds-RUP93541.1;Parent=gene-D8M19_05640;Dbxref=NCBI_GP:RUP93541.1;Name=RUP93541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120379.1;locus_tag=D8M19_05640;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=RUP93541.1;transl_table=11 RBLY01000004.1 Genbank gene 183548 185452 . + . ID=gene-D8M19_05645;Name=D8M19_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05645 RBLY01000004.1 Protein Homology CDS 183548 185452 . + 0 ID=cds-RUP93542.1;Parent=gene-D8M19_05645;Dbxref=NCBI_GP:RUP93542.1;Name=RUP93542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190743.1;locus_tag=D8M19_05645;product=DNA primase;protein_id=RUP93542.1;transl_table=11 RBLY01000004.1 Genbank gene 185594 185878 . - . ID=gene-D8M19_05650;Name=D8M19_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05650 RBLY01000004.1 Protein Homology CDS 185594 185878 . - 0 ID=cds-RUP93543.1;Parent=gene-D8M19_05650;Dbxref=NCBI_GP:RUP93543.1;Name=RUP93543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324241.1;locus_tag=D8M19_05650;product=hypothetical protein;protein_id=RUP93543.1;transl_table=11 RBLY01000004.1 Genbank gene 186428 186901 . + . ID=gene-D8M19_05655;Name=D8M19_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05655 RBLY01000004.1 Protein Homology CDS 186428 186901 . + 0 ID=cds-RUP93544.1;Parent=gene-D8M19_05655;Dbxref=NCBI_GP:RUP93544.1;Name=RUP93544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280005.1;locus_tag=D8M19_05655;product=hypothetical protein;protein_id=RUP93544.1;transl_table=11 RBLY01000004.1 Genbank gene 187371 187446 . - . ID=gene-D8M19_05660;Name=D8M19_05660;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_05660 RBLY01000004.1 tRNAscan-SE tRNA 187371 187446 . - . ID=rna-D8M19_05660;Parent=gene-D8M19_05660;anticodon=(pos:complement(187411..187413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05660;product=tRNA-Asn RBLY01000004.1 tRNAscan-SE exon 187371 187446 . - . ID=exon-D8M19_05660-1;Parent=rna-D8M19_05660;anticodon=(pos:complement(187411..187413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05660;product=tRNA-Asn RBLY01000004.1 Genbank gene 187771 189153 . + . ID=gene-D8M19_05665;Name=D8M19_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05665 RBLY01000004.1 Protein Homology CDS 187771 189153 . + 0 ID=cds-RUP93545.1;Parent=gene-D8M19_05665;Dbxref=NCBI_GP:RUP93545.1;Name=RUP93545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120384.1;locus_tag=D8M19_05665;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=RUP93545.1;transl_table=11 RBLY01000004.1 Genbank gene 189274 189350 . + . ID=gene-D8M19_05670;Name=D8M19_05670;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_05670 RBLY01000004.1 tRNAscan-SE tRNA 189274 189350 . + . ID=rna-D8M19_05670;Parent=gene-D8M19_05670;anticodon=(pos:189308..189310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05670;product=tRNA-Met RBLY01000004.1 tRNAscan-SE exon 189274 189350 . + . ID=exon-D8M19_05670-1;Parent=rna-D8M19_05670;anticodon=(pos:189308..189310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05670;product=tRNA-Met RBLY01000004.1 Genbank gene 189534 190700 . + . ID=gene-D8M19_05675;Name=D8M19_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05675 RBLY01000004.1 Protein Homology CDS 189534 190700 . + 0 ID=cds-RUP93546.1;Parent=gene-D8M19_05675;Dbxref=NCBI_GP:RUP93546.1;Name=RUP93546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005520576.1;locus_tag=D8M19_05675;product=site-specific integrase;protein_id=RUP93546.1;transl_table=11 RBLY01000004.1 Genbank gene 190752 191240 . + . ID=gene-D8M19_05680;Name=D8M19_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05680 RBLY01000004.1 Protein Homology CDS 190752 191240 . + 0 ID=cds-RUP93547.1;Parent=gene-D8M19_05680;Dbxref=NCBI_GP:RUP93547.1;Name=RUP93547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06114.11;locus_tag=D8M19_05680;product=ImmA/IrrE family metallo-endopeptidase;protein_id=RUP93547.1;transl_table=11 RBLY01000004.1 Genbank gene 191237 191626 . + . ID=gene-D8M19_05685;Name=D8M19_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05685 RBLY01000004.1 GeneMarkS+ CDS 191237 191626 . + 0 ID=cds-RUP93548.1;Parent=gene-D8M19_05685;Dbxref=NCBI_GP:RUP93548.1;Name=RUP93548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05685;product=hypothetical protein;protein_id=RUP93548.1;transl_table=11 RBLY01000004.1 Genbank gene 191706 192752 . - . ID=gene-D8M19_05690;Name=D8M19_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05690 RBLY01000004.1 Protein Homology CDS 191706 192752 . - 0 ID=cds-RUP93628.1;Parent=gene-D8M19_05690;Dbxref=NCBI_GP:RUP93628.1;Name=RUP93628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015072884.1;locus_tag=D8M19_05690;product=hydroxyacid dehydrogenase;protein_id=RUP93628.1;transl_table=11 RBLY01000004.1 Genbank gene 192959 194554 . - . ID=gene-D8M19_05695;Name=D8M19_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05695 RBLY01000004.1 Protein Homology CDS 192959 194554 . - 0 ID=cds-RUP93549.1;Parent=gene-D8M19_05695;Dbxref=NCBI_GP:RUP93549.1;Name=RUP93549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019789.1;locus_tag=D8M19_05695;product=glutamate--cysteine ligase;protein_id=RUP93549.1;transl_table=11 RBLY01000004.1 Genbank gene 194689 195861 . + . ID=gene-D8M19_05700;Name=D8M19_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05700 RBLY01000004.1 Protein Homology CDS 194689 195861 . + 0 ID=cds-RUP93550.1;Parent=gene-D8M19_05700;Dbxref=NCBI_GP:RUP93550.1;Name=RUP93550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13191.4;locus_tag=D8M19_05700;product=ATP-binding protein;protein_id=RUP93550.1;transl_table=11 RBLY01000004.1 Genbank gene 195889 196398 . - . ID=gene-D8M19_05705;Name=D8M19_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05705 RBLY01000004.1 Protein Homology CDS 195889 196398 . - 0 ID=cds-RUP93551.1;Parent=gene-D8M19_05705;Dbxref=NCBI_GP:RUP93551.1;Name=RUP93551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013349541.1;locus_tag=D8M19_05705;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=RUP93551.1;transl_table=11 RBLY01000004.1 Genbank gene 196445 196639 . + . ID=gene-D8M19_05710;Name=D8M19_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05710 RBLY01000004.1 GeneMarkS+ CDS 196445 196639 . + 0 ID=cds-RUP93552.1;Parent=gene-D8M19_05710;Dbxref=NCBI_GP:RUP93552.1;Name=RUP93552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05710;product=hypothetical protein;protein_id=RUP93552.1;transl_table=11 RBLY01000004.1 Genbank gene 196838 197032 . + . ID=gene-D8M19_05715;Name=D8M19_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05715 RBLY01000004.1 GeneMarkS+ CDS 196838 197032 . + 0 ID=cds-RUP93553.1;Parent=gene-D8M19_05715;Dbxref=NCBI_GP:RUP93553.1;Name=RUP93553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05715;product=hypothetical protein;protein_id=RUP93553.1;transl_table=11 RBLY01000004.1 Genbank gene 197134 197358 . + . ID=gene-D8M19_05720;Name=D8M19_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05720 RBLY01000004.1 GeneMarkS+ CDS 197134 197358 . + 0 ID=cds-RUP93554.1;Parent=gene-D8M19_05720;Dbxref=NCBI_GP:RUP93554.1;Name=RUP93554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05720;product=hypothetical protein;protein_id=RUP93554.1;transl_table=11 RBLY01000004.1 Genbank gene 197441 198805 . - . ID=gene-D8M19_05725;Name=D8M19_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05725 RBLY01000004.1 Protein Homology CDS 197441 198805 . - 0 ID=cds-RUP93555.1;Parent=gene-D8M19_05725;Dbxref=NCBI_GP:RUP93555.1;Name=RUP93555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012359977.1;locus_tag=D8M19_05725;product=citrate transporter;protein_id=RUP93555.1;transl_table=11 RBLY01000004.1 Genbank gene 199019 200227 . + . ID=gene-D8M19_05730;Name=D8M19_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05730 RBLY01000004.1 Protein Homology CDS 199019 200227 . + 0 ID=cds-RUP93556.1;Parent=gene-D8M19_05730;Dbxref=NCBI_GP:RUP93556.1;Name=RUP93556.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00561.18%2CHMM:PF02566.17;locus_tag=D8M19_05730;product=OsmC family protein;protein_id=RUP93556.1;transl_table=11 RBLY01000004.1 Genbank gene 200329 201087 . + . ID=gene-D8M19_05735;Name=D8M19_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05735 RBLY01000004.1 Protein Homology CDS 200329 201087 . + 0 ID=cds-RUP93629.1;Parent=gene-D8M19_05735;Dbxref=NCBI_GP:RUP93629.1;Name=RUP93629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010187514.1;locus_tag=D8M19_05735;product=enoyl-CoA hydratase;protein_id=RUP93629.1;transl_table=11 RBLY01000004.1 Genbank gene 201175 201987 . + . ID=gene-D8M19_05740;Name=D8M19_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05740 RBLY01000004.1 Protein Homology CDS 201175 201987 . + 0 ID=cds-RUP93630.1;Parent=gene-D8M19_05740;Dbxref=NCBI_GP:RUP93630.1;Name=RUP93630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849154.1;locus_tag=D8M19_05740;product=class A beta-lactamase-related serine hydrolase;protein_id=RUP93630.1;transl_table=11 RBLY01000004.1 Genbank gene 202062 202991 . - . ID=gene-D8M19_05745;Name=D8M19_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05745 RBLY01000004.1 Protein Homology CDS 202062 202991 . - 0 ID=cds-RUP93557.1;Parent=gene-D8M19_05745;Dbxref=NCBI_GP:RUP93557.1;Name=RUP93557.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00756.18;locus_tag=D8M19_05745;product=hypothetical protein;protein_id=RUP93557.1;transl_table=11 RBLY01000004.1 Genbank gene 203383 203646 . - . ID=gene-D8M19_05750;Name=D8M19_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05750 RBLY01000004.1 Protein Homology CDS 203383 203646 . - 0 ID=cds-RUP93558.1;Parent=gene-D8M19_05750;Dbxref=NCBI_GP:RUP93558.1;Name=RUP93558.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;locus_tag=D8M19_05750;product=acyl carrier protein;protein_id=RUP93558.1;transl_table=11 RBLY01000004.1 Genbank gene 203705 204409 . - . ID=gene-D8M19_05755;Name=D8M19_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05755 RBLY01000004.1 GeneMarkS+ CDS 203705 204409 . - 0 ID=cds-RUP93559.1;Parent=gene-D8M19_05755;Dbxref=NCBI_GP:RUP93559.1;Name=RUP93559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05755;product=hypothetical protein;protein_id=RUP93559.1;transl_table=11 RBLY01000004.1 Genbank gene 204769 207459 . - . ID=gene-D8M19_05760;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=D8M19_05760 RBLY01000004.1 Protein Homology CDS 204769 207459 . - 0 ID=cds-RUP93631.1;Parent=gene-D8M19_05760;Dbxref=NCBI_GP:RUP93631.1;Name=RUP93631.1;gbkey=CDS;gene=aceE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117597.1;locus_tag=D8M19_05760;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=RUP93631.1;transl_table=11 RBLY01000004.1 Genbank gene 207877 208320 . + . ID=gene-D8M19_05765;Name=D8M19_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05765 RBLY01000004.1 Protein Homology CDS 207877 208320 . + 0 ID=cds-RUP93560.1;Parent=gene-D8M19_05765;Dbxref=NCBI_GP:RUP93560.1;Name=RUP93560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120400.1;locus_tag=D8M19_05765;product=DUF3052 domain-containing protein;protein_id=RUP93560.1;transl_table=11 RBLY01000004.1 Genbank gene 208416 208488 . + . ID=gene-D8M19_05770;Name=D8M19_05770;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_05770 RBLY01000004.1 tRNAscan-SE tRNA 208416 208488 . + . ID=rna-D8M19_05770;Parent=gene-D8M19_05770;anticodon=(pos:208449..208451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05770;product=tRNA-Val RBLY01000004.1 tRNAscan-SE exon 208416 208488 . + . ID=exon-D8M19_05770-1;Parent=rna-D8M19_05770;anticodon=(pos:208449..208451);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_05770;product=tRNA-Val RBLY01000004.1 Genbank gene 208906 209220 . - . ID=gene-D8M19_05775;Name=D8M19_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05775 RBLY01000004.1 GeneMarkS+ CDS 208906 209220 . - 0 ID=cds-RUP93561.1;Parent=gene-D8M19_05775;Dbxref=NCBI_GP:RUP93561.1;Name=RUP93561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05775;product=hypothetical protein;protein_id=RUP93561.1;transl_table=11 RBLY01000004.1 Genbank gene 209213 209833 . - . ID=gene-D8M19_05780;Name=D8M19_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05780 RBLY01000004.1 Protein Homology CDS 209213 209833 . - 0 ID=cds-RUP93562.1;Parent=gene-D8M19_05780;Dbxref=NCBI_GP:RUP93562.1;Name=RUP93562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00872.16;locus_tag=D8M19_05780;product=hypothetical protein;protein_id=RUP93562.1;transl_table=11 RBLY01000004.1 Genbank gene 210178 211770 . + . ID=gene-D8M19_05785;Name=D8M19_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05785 RBLY01000004.1 Protein Homology CDS 210178 211770 . + 0 ID=cds-RUP93563.1;Parent=gene-D8M19_05785;Dbxref=NCBI_GP:RUP93563.1;Name=RUP93563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167;locus_tag=D8M19_05785;product=LPXTG cell wall anchor domain-containing protein;protein_id=RUP93563.1;transl_table=11 RBLY01000004.1 Genbank gene 211856 212845 . + . ID=gene-D8M19_05790;Name=D8M19_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05790 RBLY01000004.1 Protein Homology CDS 211856 212845 . + 0 ID=cds-RUP93564.1;Parent=gene-D8M19_05790;Dbxref=NCBI_GP:RUP93564.1;Name=RUP93564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340166.1;locus_tag=D8M19_05790;product=class C sortase;protein_id=RUP93564.1;transl_table=11 RBLY01000004.1 Genbank gene 212835 214163 . + . ID=gene-D8M19_05795;Name=D8M19_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05795 RBLY01000004.1 GeneMarkS+ CDS 212835 214163 . + 0 ID=cds-RUP93565.1;Parent=gene-D8M19_05795;Dbxref=NCBI_GP:RUP93565.1;Name=RUP93565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05795;product=hypothetical protein;protein_id=RUP93565.1;transl_table=11 RBLY01000004.1 Genbank gene 214164 217400 . + . ID=gene-D8M19_05800;Name=D8M19_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05800 RBLY01000004.1 GeneMarkS+ CDS 214164 217400 . + 0 ID=cds-RUP93566.1;Parent=gene-D8M19_05800;Dbxref=NCBI_GP:RUP93566.1;Name=RUP93566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05800;product=hypothetical protein;protein_id=RUP93566.1;transl_table=11 RBLY01000004.1 Genbank gene 217587 217802 . + . ID=gene-D8M19_05805;Name=D8M19_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05805 RBLY01000004.1 Protein Homology CDS 217587 217802 . + 0 ID=cds-RUP93567.1;Parent=gene-D8M19_05805;Dbxref=NCBI_GP:RUP93567.1;Name=RUP93567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016830544.1;locus_tag=D8M19_05805;product=hypothetical protein;protein_id=RUP93567.1;transl_table=11 RBLY01000004.1 Genbank gene 218021 218413 . + . ID=gene-D8M19_05810;Name=D8M19_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05810 RBLY01000004.1 Protein Homology CDS 218021 218413 . + 0 ID=cds-RUP93568.1;Parent=gene-D8M19_05810;Dbxref=NCBI_GP:RUP93568.1;Name=RUP93568.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M19_05810;product=hypothetical protein;protein_id=RUP93568.1;transl_table=11 RBLY01000004.1 Genbank gene 218283 218705 . + . ID=gene-D8M19_05815;Name=D8M19_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05815 RBLY01000004.1 Protein Homology CDS 218283 218705 . + 0 ID=cds-RUP93569.1;Parent=gene-D8M19_05815;Dbxref=NCBI_GP:RUP93569.1;Name=RUP93569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M19_05815;product=hypothetical protein;protein_id=RUP93569.1;transl_table=11 RBLY01000004.1 Genbank gene 219091 220761 . + . ID=gene-D8M19_05820;Name=D8M19_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05820 RBLY01000004.1 Protein Homology CDS 219091 220761 . + 0 ID=cds-RUP93570.1;Parent=gene-D8M19_05820;Dbxref=NCBI_GP:RUP93570.1;Name=RUP93570.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF16555.3;locus_tag=D8M19_05820;product=LPXTG cell wall anchor domain-containing protein;protein_id=RUP93570.1;transl_table=11 RBLY01000004.1 Genbank gene 220941 221849 . + . ID=gene-D8M19_05825;Name=D8M19_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05825 RBLY01000004.1 Protein Homology CDS 220941 221849 . + 0 ID=cds-RUP93571.1;Parent=gene-D8M19_05825;Dbxref=NCBI_GP:RUP93571.1;Name=RUP93571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120404.1;locus_tag=D8M19_05825;product=class C sortase;protein_id=RUP93571.1;transl_table=11 RBLY01000004.1 Genbank gene 222184 222966 . + . ID=gene-D8M19_05830;Name=D8M19_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05830 RBLY01000004.1 Protein Homology CDS 222184 222966 . + 0 ID=cds-RUP93572.1;Parent=gene-D8M19_05830;Dbxref=NCBI_GP:RUP93572.1;Name=RUP93572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120414.1;locus_tag=D8M19_05830;product=class E sortase;protein_id=RUP93572.1;transl_table=11 RBLY01000004.1 Genbank gene 223461 225110 . + . ID=gene-D8M19_05835;Name=D8M19_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05835 RBLY01000004.1 Protein Homology CDS 223461 225110 . + 0 ID=cds-RUP93573.1;Parent=gene-D8M19_05835;Dbxref=NCBI_GP:RUP93573.1;Name=RUP93573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04226;locus_tag=D8M19_05835;product=isopeptide-forming domain-containing fimbrial protein;protein_id=RUP93573.1;transl_table=11 RBLY01000004.1 Genbank gene 225209 228292 . + . ID=gene-D8M19_05840;Name=D8M19_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05840 RBLY01000004.1 GeneMarkS+ CDS 225209 228292 . + 0 ID=cds-RUP93574.1;Parent=gene-D8M19_05840;Dbxref=NCBI_GP:RUP93574.1;Name=RUP93574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05840;product=hypothetical protein;protein_id=RUP93574.1;transl_table=11 RBLY01000004.1 Genbank gene 228293 229222 . + . ID=gene-D8M19_05845;Name=D8M19_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05845 RBLY01000004.1 Protein Homology CDS 228293 229222 . + 0 ID=cds-RUP93575.1;Parent=gene-D8M19_05845;Dbxref=NCBI_GP:RUP93575.1;Name=RUP93575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062693.1;locus_tag=D8M19_05845;product=class C sortase;protein_id=RUP93575.1;transl_table=11 RBLY01000004.1 Genbank gene 229233 230099 . + . ID=gene-D8M19_05850;Name=D8M19_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05850 RBLY01000004.1 Protein Homology CDS 229233 230099 . + 0 ID=cds-RUP93576.1;Parent=gene-D8M19_05850;Dbxref=NCBI_GP:RUP93576.1;Name=RUP93576.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01076;locus_tag=D8M19_05850;product=sortase;protein_id=RUP93576.1;transl_table=11 RBLY01000004.1 Genbank gene 230109 231566 . + . ID=gene-D8M19_05855;Name=D8M19_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05855 RBLY01000004.1 Protein Homology CDS 230109 231566 . + 0 ID=cds-RUP93577.1;Parent=gene-D8M19_05855;Dbxref=NCBI_GP:RUP93577.1;Name=RUP93577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309861.1;locus_tag=D8M19_05855;product=Fic family protein;protein_id=RUP93577.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 232081 232953 . + . ID=gene-D8M19_05860;Name=D8M19_05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05860;pseudo=true RBLY01000004.1 Protein Homology CDS 232081 232953 . + 0 ID=cds-D8M19_05860;Parent=gene-D8M19_05860;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004014010.1;locus_tag=D8M19_05860;product=DUF3800 domain-containing protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 233407 234231 . - . ID=gene-D8M19_05865;Name=D8M19_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05865 RBLY01000004.1 Protein Homology CDS 233407 234231 . - 0 ID=cds-RUP93578.1;Parent=gene-D8M19_05865;Dbxref=NCBI_GP:RUP93578.1;Name=RUP93578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013888889.1;locus_tag=D8M19_05865;product=TIGR02391 family protein;protein_id=RUP93578.1;transl_table=11 RBLY01000004.1 Genbank gene 234393 234869 . - . ID=gene-D8M19_05870;Name=D8M19_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05870 RBLY01000004.1 Protein Homology CDS 234393 234869 . - 0 ID=cds-RUP93579.1;Parent=gene-D8M19_05870;Dbxref=NCBI_GP:RUP93579.1;Name=RUP93579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014316495.1;locus_tag=D8M19_05870;product=hypothetical protein;protein_id=RUP93579.1;transl_table=11 RBLY01000004.1 Genbank gene 235301 235480 . + . ID=gene-D8M19_05875;Name=D8M19_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05875 RBLY01000004.1 GeneMarkS+ CDS 235301 235480 . + 0 ID=cds-RUP93580.1;Parent=gene-D8M19_05875;Dbxref=NCBI_GP:RUP93580.1;Name=RUP93580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05875;product=hypothetical protein;protein_id=RUP93580.1;transl_table=11 RBLY01000004.1 Genbank gene 235670 236977 . + . ID=gene-D8M19_05880;Name=D8M19_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05880 RBLY01000004.1 Protein Homology CDS 235670 236977 . + 0 ID=cds-RUP93581.1;Parent=gene-D8M19_05880;Dbxref=NCBI_GP:RUP93581.1;Name=RUP93581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120427.1;locus_tag=D8M19_05880;product=DUF3100 domain-containing protein;protein_id=RUP93581.1;transl_table=11 RBLY01000004.1 Genbank gene 237054 238277 . + . ID=gene-D8M19_05885;Name=D8M19_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05885 RBLY01000004.1 Protein Homology CDS 237054 238277 . + 0 ID=cds-RUP93582.1;Parent=gene-D8M19_05885;Dbxref=NCBI_GP:RUP93582.1;Name=RUP93582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120428.1;locus_tag=D8M19_05885;product=amidohydrolase;protein_id=RUP93582.1;transl_table=11 RBLY01000004.1 Genbank gene 238567 240948 . + . ID=gene-D8M19_05890;Name=D8M19_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05890 RBLY01000004.1 Protein Homology CDS 238567 240948 . + 0 ID=cds-RUP93583.1;Parent=gene-D8M19_05890;Dbxref=NCBI_GP:RUP93583.1;Name=RUP93583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002311670.1;locus_tag=D8M19_05890;product=hypothetical protein;protein_id=RUP93583.1;transl_table=11 RBLY01000004.1 Genbank gene 241016 241714 . + . ID=gene-D8M19_05895;Name=D8M19_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05895 RBLY01000004.1 Protein Homology CDS 241016 241714 . + 0 ID=cds-RUP93584.1;Parent=gene-D8M19_05895;Dbxref=NCBI_GP:RUP93584.1;Name=RUP93584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301329.1;locus_tag=D8M19_05895;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=RUP93584.1;transl_table=11 RBLY01000004.1 Genbank gene 241764 242702 . - . ID=gene-D8M19_05900;Name=D8M19_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05900 RBLY01000004.1 Protein Homology CDS 241764 242702 . - 0 ID=cds-RUP93585.1;Parent=gene-D8M19_05900;Dbxref=NCBI_GP:RUP93585.1;Name=RUP93585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120431.1;locus_tag=D8M19_05900;product=S1 family peptidase;protein_id=RUP93585.1;transl_table=11 RBLY01000004.1 Genbank gene 242937 243629 . + . ID=gene-D8M19_05905;Name=D8M19_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05905 RBLY01000004.1 Protein Homology CDS 242937 243629 . + 0 ID=cds-RUP93586.1;Parent=gene-D8M19_05905;Dbxref=NCBI_GP:RUP93586.1;Name=RUP93586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120432.1;locus_tag=D8M19_05905;product=GTP pyrophosphokinase;protein_id=RUP93586.1;transl_table=11 RBLY01000004.1 Genbank gene 243653 243853 . + . ID=gene-D8M19_05910;Name=D8M19_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05910 RBLY01000004.1 Protein Homology CDS 243653 243853 . + 0 ID=cds-RUP93587.1;Parent=gene-D8M19_05910;Dbxref=NCBI_GP:RUP93587.1;Name=RUP93587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013911052.1;locus_tag=D8M19_05910;product=hypothetical protein;protein_id=RUP93587.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 244068 245297 . + . ID=gene-D8M19_05915;Name=D8M19_05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05915;pseudo=true RBLY01000004.1 Protein Homology CDS 244068 245297 . + 0 ID=cds-D8M19_05915;Parent=gene-D8M19_05915;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120434.1;locus_tag=D8M19_05915;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 245299 245541 . - . ID=gene-D8M19_05920;Name=D8M19_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05920 RBLY01000004.1 GeneMarkS+ CDS 245299 245541 . - 0 ID=cds-RUP93588.1;Parent=gene-D8M19_05920;Dbxref=NCBI_GP:RUP93588.1;Name=RUP93588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05920;product=hypothetical protein;protein_id=RUP93588.1;transl_table=11 RBLY01000004.1 Genbank gene 245943 247034 . - . ID=gene-D8M19_05925;Name=D8M19_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05925 RBLY01000004.1 Protein Homology CDS 245943 247034 . - 0 ID=cds-RUP93589.1;Parent=gene-D8M19_05925;Dbxref=NCBI_GP:RUP93589.1;Name=RUP93589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120436.1;locus_tag=D8M19_05925;product=2%2C3-butanediol dehydrogenase;protein_id=RUP93589.1;transl_table=11 RBLY01000004.1 Genbank pseudogene 247247 247510 . + . ID=gene-D8M19_05930;Name=D8M19_05930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_05930;pseudo=true RBLY01000004.1 Protein Homology CDS 247247 247510 . + 0 ID=cds-D8M19_05930;Parent=gene-D8M19_05930;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120437.1;locus_tag=D8M19_05930;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000004.1 Genbank gene 247598 248107 . - . ID=gene-D8M19_05935;Name=D8M19_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05935 RBLY01000004.1 Protein Homology CDS 247598 248107 . - 0 ID=cds-RUP93632.1;Parent=gene-D8M19_05935;Dbxref=NCBI_GP:RUP93632.1;Name=RUP93632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281714.1;locus_tag=D8M19_05935;product=2'-5' RNA ligase;protein_id=RUP93632.1;transl_table=11 RBLY01000004.1 Genbank gene 248197 250419 . - . ID=gene-D8M19_05940;Name=D8M19_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05940 RBLY01000004.1 Protein Homology CDS 248197 250419 . - 0 ID=cds-RUP93590.1;Parent=gene-D8M19_05940;Dbxref=NCBI_GP:RUP93590.1;Name=RUP93590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120440.1;locus_tag=D8M19_05940;product=YhgE/Pip domain-containing protein;protein_id=RUP93590.1;transl_table=11 RBLY01000004.1 Genbank gene 250416 252959 . - . ID=gene-D8M19_05945;Name=D8M19_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05945 RBLY01000004.1 Protein Homology CDS 250416 252959 . - 0 ID=cds-RUP93591.1;Parent=gene-D8M19_05945;Dbxref=NCBI_GP:RUP93591.1;Name=RUP93591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005282581.1;locus_tag=D8M19_05945;product=YhgE/Pip domain-containing protein;protein_id=RUP93591.1;transl_table=11 RBLY01000004.1 Genbank gene 253160 254284 . - . ID=gene-D8M19_05950;Name=D8M19_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05950 RBLY01000004.1 Protein Homology CDS 253160 254284 . - 0 ID=cds-RUP93592.1;Parent=gene-D8M19_05950;Dbxref=NCBI_GP:RUP93592.1;Name=RUP93592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528564.1;locus_tag=D8M19_05950;product=SURF1 family protein;protein_id=RUP93592.1;transl_table=11 RBLY01000004.1 Genbank gene 254338 254814 . - . ID=gene-D8M19_05955;Name=D8M19_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05955 RBLY01000004.1 Protein Homology CDS 254338 254814 . - 0 ID=cds-RUP93593.1;Parent=gene-D8M19_05955;Dbxref=NCBI_GP:RUP93593.1;Name=RUP93593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117590.1;locus_tag=D8M19_05955;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=RUP93593.1;transl_table=11 RBLY01000004.1 Genbank gene 254894 256033 . + . ID=gene-D8M19_05960;Name=D8M19_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05960 RBLY01000004.1 Protein Homology CDS 254894 256033 . + 0 ID=cds-RUP93633.1;Parent=gene-D8M19_05960;Dbxref=NCBI_GP:RUP93633.1;Name=RUP93633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849095.1;locus_tag=D8M19_05960;product=Nif3-like dinuclear metal center hexameric protein;protein_id=RUP93633.1;transl_table=11 RBLY01000004.1 Genbank gene 256095 256856 . + . ID=gene-D8M19_05965;Name=D8M19_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05965 RBLY01000004.1 Protein Homology CDS 256095 256856 . + 0 ID=cds-RUP93634.1;Parent=gene-D8M19_05965;Dbxref=NCBI_GP:RUP93634.1;Name=RUP93634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190637.1;locus_tag=D8M19_05965;product=hypothetical protein;protein_id=RUP93634.1;transl_table=11 RBLY01000004.1 Genbank gene 256886 258088 . + . ID=gene-D8M19_05970;Name=D8M19_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05970 RBLY01000004.1 Protein Homology CDS 256886 258088 . + 0 ID=cds-RUP93594.1;Parent=gene-D8M19_05970;Dbxref=NCBI_GP:RUP93594.1;Name=RUP93594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401415.1;locus_tag=D8M19_05970;product=bifunctional RNase H/acid phosphatase;protein_id=RUP93594.1;transl_table=11 RBLY01000004.1 Genbank gene 258085 258978 . - . ID=gene-D8M19_05975;Name=D8M19_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05975 RBLY01000004.1 GeneMarkS+ CDS 258085 258978 . - 0 ID=cds-RUP93595.1;Parent=gene-D8M19_05975;Dbxref=NCBI_GP:RUP93595.1;Name=RUP93595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_05975;product=hypothetical protein;protein_id=RUP93595.1;transl_table=11 RBLY01000004.1 Genbank gene 259175 260239 . + . ID=gene-D8M19_05980;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=D8M19_05980 RBLY01000004.1 Protein Homology CDS 259175 260239 . + 0 ID=cds-RUP93596.1;Parent=gene-D8M19_05980;Dbxref=NCBI_GP:RUP93596.1;Name=RUP93596.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367708.1;locus_tag=D8M19_05980;product=alcohol dehydrogenase AdhP;protein_id=RUP93596.1;transl_table=11 RBLY01000004.1 Genbank gene 260344 260779 . + . ID=gene-D8M19_05985;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=D8M19_05985 RBLY01000004.1 cmsearch RNase_P_RNA 260344 260779 . + . ID=rna-D8M19_05985;Parent=gene-D8M19_05985;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_05985;product=RNase P RNA component class A RBLY01000004.1 cmsearch exon 260344 260779 . + . ID=exon-D8M19_05985-1;Parent=rna-D8M19_05985;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_05985;product=RNase P RNA component class A RBLY01000004.1 Genbank gene 260773 262068 . - . ID=gene-D8M19_05990;Name=D8M19_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05990 RBLY01000004.1 Protein Homology CDS 260773 262068 . - 0 ID=cds-RUP93597.1;Parent=gene-D8M19_05990;Dbxref=NCBI_GP:RUP93597.1;Name=RUP93597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328155.1;locus_tag=D8M19_05990;product=galactokinase;protein_id=RUP93597.1;transl_table=11 RBLY01000004.1 Genbank gene 262294 262506 . + . ID=gene-D8M19_05995;Name=D8M19_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_05995 RBLY01000004.1 Protein Homology CDS 262294 262506 . + 0 ID=cds-RUP93598.1;Parent=gene-D8M19_05995;Dbxref=NCBI_GP:RUP93598.1;Name=RUP93598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120449.1;locus_tag=D8M19_05995;product=hypothetical protein;protein_id=RUP93598.1;transl_table=11 RBLY01000004.1 Genbank gene 262565 263902 . + . ID=gene-D8M19_06000;Name=D8M19_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06000 RBLY01000004.1 Protein Homology CDS 262565 263902 . + 0 ID=cds-RUP93599.1;Parent=gene-D8M19_06000;Dbxref=NCBI_GP:RUP93599.1;Name=RUP93599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849079.1;locus_tag=D8M19_06000;product=glutamine synthetase;protein_id=RUP93599.1;transl_table=11 RBLY01000004.1 Genbank gene 263925 267134 . + . ID=gene-D8M19_06005;Name=D8M19_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06005 RBLY01000004.1 Protein Homology CDS 263925 267134 . + 0 ID=cds-RUP93600.1;Parent=gene-D8M19_06005;Dbxref=NCBI_GP:RUP93600.1;Name=RUP93600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120451.1;locus_tag=D8M19_06005;product=bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase;protein_id=RUP93600.1;transl_table=11 ##sequence-region RBLY01000005.1 1 240583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000005.1 Genbank region 1 240583 . + . ID=RBLY01000005.1:1..240583;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000005.1 Genbank gene 1 91 . + . ID=gene-D8M19_06010;Name=D8M19_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06010;partial=true;start_range=.,1 RBLY01000005.1 Protein Homology CDS 1 91 . + 1 ID=cds-RUP92823.1;Parent=gene-D8M19_06010;Dbxref=NCBI_GP:RUP92823.1;Name=RUP92823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M19_06010;partial=true;product=hypothetical protein;protein_id=RUP92823.1;start_range=.,1;transl_table=11 RBLY01000005.1 Genbank gene 172 3627 . - . ID=gene-D8M19_06015;Name=D8M19_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06015 RBLY01000005.1 Protein Homology CDS 172 3627 . - 0 ID=cds-RUP92824.1;Parent=gene-D8M19_06015;Dbxref=NCBI_GP:RUP92824.1;Name=RUP92824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120731.1;locus_tag=D8M19_06015;product=aldehyde dehydrogenase family protein;protein_id=RUP92824.1;transl_table=11 RBLY01000005.1 Genbank gene 4061 5923 . + . ID=gene-D8M19_06020;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=D8M19_06020 RBLY01000005.1 Protein Homology CDS 4061 5923 . + 0 ID=cds-RUP92825.1;Parent=gene-D8M19_06020;Dbxref=NCBI_GP:RUP92825.1;Name=RUP92825.1;gbkey=CDS;gene=dnaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279388.1;locus_tag=D8M19_06020;product=molecular chaperone DnaK;protein_id=RUP92825.1;transl_table=11 RBLY01000005.1 Genbank gene 5924 6646 . + . ID=gene-D8M19_06025;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=D8M19_06025 RBLY01000005.1 Protein Homology CDS 5924 6646 . + 0 ID=cds-RUP92826.1;Parent=gene-D8M19_06025;Dbxref=NCBI_GP:RUP92826.1;Name=RUP92826.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120733.1;locus_tag=D8M19_06025;product=nucleotide exchange factor GrpE;protein_id=RUP92826.1;transl_table=11 RBLY01000005.1 Genbank gene 6672 7862 . + . ID=gene-D8M19_06030;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=D8M19_06030 RBLY01000005.1 Protein Homology CDS 6672 7862 . + 0 ID=cds-RUP92827.1;Parent=gene-D8M19_06030;Dbxref=NCBI_GP:RUP92827.1;Name=RUP92827.1;gbkey=CDS;gene=dnaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120734.1;locus_tag=D8M19_06030;product=molecular chaperone DnaJ;protein_id=RUP92827.1;transl_table=11 RBLY01000005.1 Genbank gene 7893 8354 . + . ID=gene-D8M19_06035;Name=D8M19_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06035 RBLY01000005.1 Protein Homology CDS 7893 8354 . + 0 ID=cds-RUP92828.1;Parent=gene-D8M19_06035;Dbxref=NCBI_GP:RUP92828.1;Name=RUP92828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120735.1;locus_tag=D8M19_06035;product=MerR family transcriptional regulator;protein_id=RUP92828.1;transl_table=11 RBLY01000005.1 Genbank gene 8588 10102 . + . ID=gene-D8M19_06040;Name=D8M19_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06040 RBLY01000005.1 Protein Homology CDS 8588 10102 . + 0 ID=cds-RUP92829.1;Parent=gene-D8M19_06040;Dbxref=NCBI_GP:RUP92829.1;Name=RUP92829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329341.1;locus_tag=D8M19_06040;product=aldehyde dehydrogenase;protein_id=RUP92829.1;transl_table=11 RBLY01000005.1 Genbank gene 10109 11389 . - . ID=gene-D8M19_06045;Name=D8M19_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06045 RBLY01000005.1 Protein Homology CDS 10109 11389 . - 0 ID=cds-RUP92830.1;Parent=gene-D8M19_06045;Dbxref=NCBI_GP:RUP92830.1;Name=RUP92830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06259.10;locus_tag=D8M19_06045;product=hypothetical protein;protein_id=RUP92830.1;transl_table=11 RBLY01000005.1 Genbank gene 11392 11712 . - . ID=gene-D8M19_06050;Name=D8M19_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06050 RBLY01000005.1 GeneMarkS+ CDS 11392 11712 . - 0 ID=cds-RUP92831.1;Parent=gene-D8M19_06050;Dbxref=NCBI_GP:RUP92831.1;Name=RUP92831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06050;product=hypothetical protein;protein_id=RUP92831.1;transl_table=11 RBLY01000005.1 Genbank gene 11825 12652 . + . ID=gene-D8M19_06055;Name=D8M19_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06055 RBLY01000005.1 Protein Homology CDS 11825 12652 . + 0 ID=cds-RUP92832.1;Parent=gene-D8M19_06055;Dbxref=NCBI_GP:RUP92832.1;Name=RUP92832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120739.1;locus_tag=D8M19_06055;product=amidohydrolase;protein_id=RUP92832.1;transl_table=11 RBLY01000005.1 Genbank gene 12677 13321 . - . ID=gene-D8M19_06060;Name=D8M19_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06060 RBLY01000005.1 Protein Homology CDS 12677 13321 . - 0 ID=cds-RUP92833.1;Parent=gene-D8M19_06060;Dbxref=NCBI_GP:RUP92833.1;Name=RUP92833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863455.1;locus_tag=D8M19_06060;product=ATP-binding cassette domain-containing protein;protein_id=RUP92833.1;transl_table=11 RBLY01000005.1 Genbank gene 13403 15442 . - . ID=gene-D8M19_06065;Name=D8M19_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06065 RBLY01000005.1 GeneMarkS+ CDS 13403 15442 . - 0 ID=cds-RUP92834.1;Parent=gene-D8M19_06065;Dbxref=NCBI_GP:RUP92834.1;Name=RUP92834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06065;product=hypothetical protein;protein_id=RUP92834.1;transl_table=11 RBLY01000005.1 Genbank gene 15623 15832 . - . ID=gene-D8M19_06070;Name=D8M19_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06070 RBLY01000005.1 GeneMarkS+ CDS 15623 15832 . - 0 ID=cds-RUP92835.1;Parent=gene-D8M19_06070;Dbxref=NCBI_GP:RUP92835.1;Name=RUP92835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06070;product=hypothetical protein;protein_id=RUP92835.1;transl_table=11 RBLY01000005.1 Genbank gene 15821 16435 . + . ID=gene-D8M19_06075;Name=D8M19_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06075 RBLY01000005.1 GeneMarkS+ CDS 15821 16435 . + 0 ID=cds-RUP92836.1;Parent=gene-D8M19_06075;Dbxref=NCBI_GP:RUP92836.1;Name=RUP92836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06075;product=hypothetical protein;protein_id=RUP92836.1;transl_table=11 RBLY01000005.1 Genbank gene 16475 16741 . + . ID=gene-D8M19_06080;Name=D8M19_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06080 RBLY01000005.1 GeneMarkS+ CDS 16475 16741 . + 0 ID=cds-RUP92837.1;Parent=gene-D8M19_06080;Dbxref=NCBI_GP:RUP92837.1;Name=RUP92837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06080;product=hypothetical protein;protein_id=RUP92837.1;transl_table=11 RBLY01000005.1 Genbank gene 16738 17973 . - . ID=gene-D8M19_06085;Name=D8M19_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06085 RBLY01000005.1 GeneMarkS+ CDS 16738 17973 . - 0 ID=cds-RUP92838.1;Parent=gene-D8M19_06085;Dbxref=NCBI_GP:RUP92838.1;Name=RUP92838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06085;product=hypothetical protein;protein_id=RUP92838.1;transl_table=11 RBLY01000005.1 Genbank gene 18274 19671 . + . ID=gene-D8M19_06090;Name=D8M19_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06090 RBLY01000005.1 Protein Homology CDS 18274 19671 . + 0 ID=cds-RUP92839.1;Parent=gene-D8M19_06090;Dbxref=NCBI_GP:RUP92839.1;Name=RUP92839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120743.1;locus_tag=D8M19_06090;product=sodium:glutamate symporter;protein_id=RUP92839.1;transl_table=11 RBLY01000005.1 Genbank gene 19899 22457 . + . ID=gene-D8M19_06095;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=D8M19_06095 RBLY01000005.1 Protein Homology CDS 19899 22457 . + 0 ID=cds-RUP92840.1;Parent=gene-D8M19_06095;Dbxref=NCBI_GP:RUP92840.1;Name=RUP92840.1;gbkey=CDS;gene=clpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188684.1;locus_tag=D8M19_06095;product=ATP-dependent chaperone ClpB;protein_id=RUP92840.1;transl_table=11 RBLY01000005.1 Genbank gene 22515 23345 . + . ID=gene-D8M19_06100;Name=D8M19_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06100 RBLY01000005.1 Protein Homology CDS 22515 23345 . + 0 ID=cds-RUP92841.1;Parent=gene-D8M19_06100;Dbxref=NCBI_GP:RUP92841.1;Name=RUP92841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120747.1;locus_tag=D8M19_06100;product=sulfurtransferase;protein_id=RUP92841.1;transl_table=11 RBLY01000005.1 Genbank gene 24234 25100 . + . ID=gene-D8M19_06105;Name=D8M19_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06105 RBLY01000005.1 Protein Homology CDS 24234 25100 . + 0 ID=cds-RUP93003.1;Parent=gene-D8M19_06105;Dbxref=NCBI_GP:RUP93003.1;Name=RUP93003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529757.1;locus_tag=D8M19_06105;product=hypothetical protein;protein_id=RUP93003.1;transl_table=11 RBLY01000005.1 Genbank gene 25118 25675 . + . ID=gene-D8M19_06110;Name=D8M19_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06110 RBLY01000005.1 Protein Homology CDS 25118 25675 . + 0 ID=cds-RUP92842.1;Parent=gene-D8M19_06110;Dbxref=NCBI_GP:RUP92842.1;Name=RUP92842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120749.1;locus_tag=D8M19_06110;product=orotate phosphoribosyltransferase;protein_id=RUP92842.1;transl_table=11 RBLY01000005.1 Genbank gene 25705 26376 . + . ID=gene-D8M19_06115;Name=D8M19_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06115 RBLY01000005.1 Protein Homology CDS 25705 26376 . + 0 ID=cds-RUP93004.1;Parent=gene-D8M19_06115;Dbxref=NCBI_GP:RUP93004.1;Name=RUP93004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401926.1;locus_tag=D8M19_06115;product=RNA methyltransferase;protein_id=RUP93004.1;transl_table=11 RBLY01000005.1 Genbank gene 26488 27693 . + . ID=gene-D8M19_06120;Name=D8M19_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06120 RBLY01000005.1 Protein Homology CDS 26488 27693 . + 0 ID=cds-RUP92843.1;Parent=gene-D8M19_06120;Dbxref=NCBI_GP:RUP92843.1;Name=RUP92843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120751.1;locus_tag=D8M19_06120;product=glycoside hydrolase family 76;protein_id=RUP92843.1;transl_table=11 RBLY01000005.1 Genbank gene 27752 28786 . + . ID=gene-D8M19_06125;Name=D8M19_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06125 RBLY01000005.1 Protein Homology CDS 27752 28786 . + 0 ID=cds-RUP92844.1;Parent=gene-D8M19_06125;Dbxref=NCBI_GP:RUP92844.1;Name=RUP92844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601964.1;locus_tag=D8M19_06125;product=class II fructose-bisphosphate aldolase;protein_id=RUP92844.1;transl_table=11 RBLY01000005.1 Genbank gene 28829 30058 . + . ID=gene-D8M19_06130;Name=D8M19_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06130 RBLY01000005.1 Protein Homology CDS 28829 30058 . + 0 ID=cds-RUP92845.1;Parent=gene-D8M19_06130;Dbxref=NCBI_GP:RUP92845.1;Name=RUP92845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120753.1;locus_tag=D8M19_06130;product=aromatic acid exporter family protein;protein_id=RUP92845.1;transl_table=11 RBLY01000005.1 Genbank gene 30099 31067 . - . ID=gene-D8M19_06135;Name=D8M19_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06135 RBLY01000005.1 Protein Homology CDS 30099 31067 . - 0 ID=cds-RUP93005.1;Parent=gene-D8M19_06135;Dbxref=NCBI_GP:RUP93005.1;Name=RUP93005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120754.1;locus_tag=D8M19_06135;product=hypothetical protein;protein_id=RUP93005.1;transl_table=11 RBLY01000005.1 Genbank gene 31174 32466 . + . ID=gene-D8M19_06140;Name=D8M19_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06140 RBLY01000005.1 Protein Homology CDS 31174 32466 . + 0 ID=cds-RUP92846.1;Parent=gene-D8M19_06140;Dbxref=NCBI_GP:RUP92846.1;Name=RUP92846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847779.1;locus_tag=D8M19_06140;product=adenylosuccinate synthase;protein_id=RUP92846.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 32473 33780 . + . ID=gene-D8M19_06145;Name=D8M19_06145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06145;pseudo=true RBLY01000005.1 Protein Homology CDS 32473 33780 . + 0 ID=cds-D8M19_06145;Parent=gene-D8M19_06145;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120756.1;locus_tag=D8M19_06145;product=formate-dependent phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11 RBLY01000005.1 Genbank pseudogene 33990 36332 . - . ID=gene-D8M19_06150;Name=D8M19_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06150;pseudo=true RBLY01000005.1 Protein Homology CDS 33990 36332 . - 0 ID=cds-D8M19_06150;Parent=gene-D8M19_06150;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188747.1;locus_tag=D8M19_06150;product=serine/threonine protein kinase;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 36462 37568 . - . ID=gene-D8M19_06155;Name=D8M19_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06155 RBLY01000005.1 Protein Homology CDS 36462 37568 . - 0 ID=cds-RUP92847.1;Parent=gene-D8M19_06155;Dbxref=NCBI_GP:RUP92847.1;Name=RUP92847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401911.1;locus_tag=D8M19_06155;product=glutamate ABC transporter substrate-binding protein;protein_id=RUP92847.1;transl_table=11 RBLY01000005.1 Genbank gene 37565 39091 . - . ID=gene-D8M19_06160;Name=D8M19_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06160 RBLY01000005.1 Protein Homology CDS 37565 39091 . - 0 ID=cds-RUP92848.1;Parent=gene-D8M19_06160;Dbxref=NCBI_GP:RUP92848.1;Name=RUP92848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120759.1;locus_tag=D8M19_06160;product=hypothetical protein;protein_id=RUP92848.1;transl_table=11 RBLY01000005.1 Genbank gene 39142 39651 . + . ID=gene-D8M19_06165;Name=D8M19_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06165 RBLY01000005.1 Protein Homology CDS 39142 39651 . + 0 ID=cds-RUP92849.1;Parent=gene-D8M19_06165;Dbxref=NCBI_GP:RUP92849.1;Name=RUP92849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601943.1;locus_tag=D8M19_06165;product=NUDIX hydrolase;protein_id=RUP92849.1;transl_table=11 RBLY01000005.1 Genbank gene 39756 41348 . - . ID=gene-D8M19_06170;Name=D8M19_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06170 RBLY01000005.1 Protein Homology CDS 39756 41348 . - 0 ID=cds-RUP92850.1;Parent=gene-D8M19_06170;Dbxref=NCBI_GP:RUP92850.1;Name=RUP92850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120761.1;locus_tag=D8M19_06170;product=cardiolipin synthase A;protein_id=RUP92850.1;transl_table=11 RBLY01000005.1 Genbank gene 41352 42176 . - . ID=gene-D8M19_06175;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=D8M19_06175 RBLY01000005.1 Protein Homology CDS 41352 42176 . - 0 ID=cds-RUP92851.1;Parent=gene-D8M19_06175;Dbxref=NCBI_GP:RUP92851.1;Name=RUP92851.1;gbkey=CDS;gene=xth;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004601265.1;locus_tag=D8M19_06175;product=exodeoxyribonuclease III;protein_id=RUP92851.1;transl_table=11 RBLY01000005.1 Genbank gene 42212 43282 . - . ID=gene-D8M19_06180;Name=D8M19_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06180 RBLY01000005.1 Protein Homology CDS 42212 43282 . - 0 ID=cds-RUP92852.1;Parent=gene-D8M19_06180;Dbxref=NCBI_GP:RUP92852.1;Name=RUP92852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120763.1;locus_tag=D8M19_06180;product=GNAT family N-acetyltransferase;protein_id=RUP92852.1;transl_table=11 RBLY01000005.1 Genbank gene 43292 43909 . - . ID=gene-D8M19_06185;Name=D8M19_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06185 RBLY01000005.1 Protein Homology CDS 43292 43909 . - 0 ID=cds-RUP92853.1;Parent=gene-D8M19_06185;Dbxref=NCBI_GP:RUP92853.1;Name=RUP92853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120764.1;locus_tag=D8M19_06185;product=peptide deformylase;protein_id=RUP92853.1;transl_table=11 RBLY01000005.1 Genbank gene 43926 44195 . + . ID=gene-D8M19_06190;Name=D8M19_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06190 RBLY01000005.1 Protein Homology CDS 43926 44195 . + 0 ID=cds-RUP93006.1;Parent=gene-D8M19_06190;Dbxref=NCBI_GP:RUP93006.1;Name=RUP93006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120765.1;locus_tag=D8M19_06190;product=DUF3263 domain-containing protein;protein_id=RUP93006.1;transl_table=11 RBLY01000005.1 Genbank gene 44197 45051 . + . ID=gene-D8M19_06195;Name=D8M19_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06195 RBLY01000005.1 Protein Homology CDS 44197 45051 . + 0 ID=cds-RUP92854.1;Parent=gene-D8M19_06195;Dbxref=NCBI_GP:RUP92854.1;Name=RUP92854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13399.4;locus_tag=D8M19_06195;product=LytR family transcriptional regulator;protein_id=RUP92854.1;transl_table=11 RBLY01000005.1 Genbank gene 45051 46301 . + . ID=gene-D8M19_06200;Name=D8M19_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06200 RBLY01000005.1 Protein Homology CDS 45051 46301 . + 0 ID=cds-RUP92855.1;Parent=gene-D8M19_06200;Dbxref=NCBI_GP:RUP92855.1;Name=RUP92855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822631.1;locus_tag=D8M19_06200;product=glutamate--cysteine ligase;protein_id=RUP92855.1;transl_table=11 RBLY01000005.1 Genbank gene 46310 46708 . - . ID=gene-D8M19_06205;Name=D8M19_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06205 RBLY01000005.1 Protein Homology CDS 46310 46708 . - 0 ID=cds-RUP92856.1;Parent=gene-D8M19_06205;Dbxref=NCBI_GP:RUP92856.1;Name=RUP92856.1;Note=subunit G of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120769.1;locus_tag=D8M19_06205;product=cation:proton antiporter;protein_id=RUP92856.1;transl_table=11 RBLY01000005.1 Genbank gene 46711 46986 . - . ID=gene-D8M19_06210;Name=D8M19_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06210 RBLY01000005.1 Protein Homology CDS 46711 46986 . - 0 ID=cds-RUP92857.1;Parent=gene-D8M19_06210;Dbxref=NCBI_GP:RUP92857.1;Name=RUP92857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120770.1;locus_tag=D8M19_06210;product=cation:proton antiporter;protein_id=RUP92857.1;transl_table=11 RBLY01000005.1 Genbank gene 46990 47565 . - . ID=gene-D8M19_06215;Name=D8M19_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06215 RBLY01000005.1 Protein Homology CDS 46990 47565 . - 0 ID=cds-RUP92858.1;Parent=gene-D8M19_06215;Dbxref=NCBI_GP:RUP92858.1;Name=RUP92858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015652160.1;locus_tag=D8M19_06215;product=Na+/H+ antiporter subunit E;protein_id=RUP92858.1;transl_table=11 RBLY01000005.1 Genbank gene 47565 49343 . - . ID=gene-D8M19_06220;Name=D8M19_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06220 RBLY01000005.1 Protein Homology CDS 47565 49343 . - 0 ID=cds-RUP92859.1;Parent=gene-D8M19_06220;Dbxref=NCBI_GP:RUP92859.1;Name=RUP92859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581021.1;locus_tag=D8M19_06220;product=Na+/H+ antiporter subunit D;protein_id=RUP92859.1;transl_table=11 RBLY01000005.1 Genbank gene 49336 49842 . - . ID=gene-D8M19_06225;Name=D8M19_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06225 RBLY01000005.1 Protein Homology CDS 49336 49842 . - 0 ID=cds-RUP92860.1;Parent=gene-D8M19_06225;Dbxref=NCBI_GP:RUP92860.1;Name=RUP92860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120773.1;locus_tag=D8M19_06225;product=Na(+)/H(+) antiporter subunit C;protein_id=RUP92860.1;transl_table=11 RBLY01000005.1 Genbank gene 49842 52901 . - . ID=gene-D8M19_06230;Name=D8M19_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06230 RBLY01000005.1 Protein Homology CDS 49842 52901 . - 0 ID=cds-RUP92861.1;Parent=gene-D8M19_06230;Dbxref=NCBI_GP:RUP92861.1;Name=RUP92861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325631.1;locus_tag=D8M19_06230;product=Na+/H+ antiporter subunit A;protein_id=RUP92861.1;transl_table=11 RBLY01000005.1 Genbank gene 52952 54295 . - . ID=gene-D8M19_06235;Name=D8M19_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06235 RBLY01000005.1 Protein Homology CDS 52952 54295 . - 0 ID=cds-RUP93007.1;Parent=gene-D8M19_06235;Dbxref=NCBI_GP:RUP93007.1;Name=RUP93007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581018.1;locus_tag=D8M19_06235;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP93007.1;transl_table=11 RBLY01000005.1 Genbank gene 54375 55787 . - . ID=gene-D8M19_06240;Name=D8M19_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06240 RBLY01000005.1 Protein Homology CDS 54375 55787 . - 0 ID=cds-RUP93008.1;Parent=gene-D8M19_06240;Dbxref=NCBI_GP:RUP93008.1;Name=RUP93008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022797.1;locus_tag=D8M19_06240;product=M20/M25/M40 family metallo-hydrolase;protein_id=RUP93008.1;transl_table=11 RBLY01000005.1 Genbank gene 56217 57863 . + . ID=gene-D8M19_06245;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=D8M19_06245 RBLY01000005.1 Protein Homology CDS 56217 57863 . + 0 ID=cds-RUP92862.1;Parent=gene-D8M19_06245;Dbxref=NCBI_GP:RUP92862.1;Name=RUP92862.1;gbkey=CDS;gene=groL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120777.1;locus_tag=D8M19_06245;product=chaperonin GroEL;protein_id=RUP92862.1;transl_table=11 RBLY01000005.1 Genbank gene 58435 58632 . + . ID=gene-D8M19_06250;Name=D8M19_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06250 RBLY01000005.1 GeneMarkS+ CDS 58435 58632 . + 0 ID=cds-RUP92863.1;Parent=gene-D8M19_06250;Dbxref=NCBI_GP:RUP92863.1;Name=RUP92863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06250;product=hypothetical protein;protein_id=RUP92863.1;transl_table=11 RBLY01000005.1 Genbank gene 58998 59897 . + . ID=gene-D8M19_06255;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=D8M19_06255 RBLY01000005.1 Protein Homology CDS 58998 59897 . + 0 ID=cds-RUP92864.1;Parent=gene-D8M19_06255;Dbxref=NCBI_GP:RUP92864.1;Name=RUP92864.1;gbkey=CDS;gene=ppk2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018117940.1;locus_tag=D8M19_06255;product=polyphosphate kinase 2;protein_id=RUP92864.1;transl_table=11 RBLY01000005.1 Genbank gene 59929 60255 . - . ID=gene-D8M19_06260;Name=D8M19_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06260 RBLY01000005.1 Protein Homology CDS 59929 60255 . - 0 ID=cds-RUP92865.1;Parent=gene-D8M19_06260;Dbxref=NCBI_GP:RUP92865.1;Name=RUP92865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120781.1;locus_tag=D8M19_06260;product=rhodanese-like domain-containing protein;protein_id=RUP92865.1;transl_table=11 RBLY01000005.1 Genbank gene 60466 61278 . - . ID=gene-D8M19_06265;Name=D8M19_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06265 RBLY01000005.1 Protein Homology CDS 60466 61278 . - 0 ID=cds-RUP92866.1;Parent=gene-D8M19_06265;Dbxref=NCBI_GP:RUP92866.1;Name=RUP92866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120782.1;locus_tag=D8M19_06265;product=hypothetical protein;protein_id=RUP92866.1;transl_table=11 RBLY01000005.1 Genbank gene 61485 61961 . - . ID=gene-D8M19_06270;Name=D8M19_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06270 RBLY01000005.1 Protein Homology CDS 61485 61961 . - 0 ID=cds-RUP92867.1;Parent=gene-D8M19_06270;Dbxref=NCBI_GP:RUP92867.1;Name=RUP92867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310832.1;locus_tag=D8M19_06270;product=inorganic diphosphatase;protein_id=RUP92867.1;transl_table=11 RBLY01000005.1 Genbank gene 62136 63473 . + . ID=gene-D8M19_06275;Name=D8M19_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06275 RBLY01000005.1 Protein Homology CDS 62136 63473 . + 0 ID=cds-RUP92868.1;Parent=gene-D8M19_06275;Dbxref=NCBI_GP:RUP92868.1;Name=RUP92868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401868.1;locus_tag=D8M19_06275;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=RUP92868.1;transl_table=11 RBLY01000005.1 Genbank gene 63486 64730 . + . ID=gene-D8M19_06280;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=D8M19_06280 RBLY01000005.1 Protein Homology CDS 63486 64730 . + 0 ID=cds-RUP92869.1;Parent=gene-D8M19_06280;Dbxref=NCBI_GP:RUP92869.1;Name=RUP92869.1;gbkey=CDS;gene=tilS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018022819.1;locus_tag=D8M19_06280;product=tRNA lysidine(34) synthetase TilS;protein_id=RUP92869.1;transl_table=11 RBLY01000005.1 Genbank gene 64815 65426 . + . ID=gene-D8M19_06285;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=D8M19_06285 RBLY01000005.1 Protein Homology CDS 64815 65426 . + 0 ID=cds-RUP92870.1;Parent=gene-D8M19_06285;Dbxref=NCBI_GP:RUP92870.1;Name=RUP92870.1;gbkey=CDS;gene=hpt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120787.1;locus_tag=D8M19_06285;product=hypoxanthine phosphoribosyltransferase;protein_id=RUP92870.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 65476 67461 . + . ID=gene-D8M19_06290;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=pseudogene;locus_tag=D8M19_06290;pseudo=true RBLY01000005.1 Protein Homology CDS 65476 67461 . + 0 ID=cds-D8M19_06290;Parent=gene-D8M19_06290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601892.1;locus_tag=D8M19_06290;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 67808 68404 . + . ID=gene-D8M19_06295;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=D8M19_06295 RBLY01000005.1 Protein Homology CDS 67808 68404 . + 0 ID=cds-RUP92871.1;Parent=gene-D8M19_06295;Dbxref=NCBI_GP:RUP92871.1;Name=RUP92871.1;gbkey=CDS;gene=folE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120789.1;locus_tag=D8M19_06295;product=GTP cyclohydrolase I FolE;protein_id=RUP92871.1;transl_table=11 RBLY01000005.1 Genbank gene 68525 69352 . + . ID=gene-D8M19_06300;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=D8M19_06300 RBLY01000005.1 Protein Homology CDS 68525 69352 . + 0 ID=cds-RUP93009.1;Parent=gene-D8M19_06300;Dbxref=NCBI_GP:RUP93009.1;Name=RUP93009.1;gbkey=CDS;gene=folP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297316.1;locus_tag=D8M19_06300;product=dihydropteroate synthase;protein_id=RUP93009.1;transl_table=11 RBLY01000005.1 Genbank gene 69438 69788 . + . ID=gene-D8M19_06305;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=D8M19_06305 RBLY01000005.1 Protein Homology CDS 69438 69788 . + 0 ID=cds-RUP92872.1;Parent=gene-D8M19_06305;Dbxref=NCBI_GP:RUP92872.1;Name=RUP92872.1;gbkey=CDS;gene=folB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120791.1;locus_tag=D8M19_06305;product=dihydroneopterin aldolase;protein_id=RUP92872.1;transl_table=11 RBLY01000005.1 Genbank gene 69785 70309 . + . ID=gene-D8M19_06310;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=D8M19_06310 RBLY01000005.1 Protein Homology CDS 69785 70309 . + 0 ID=cds-RUP92873.1;Parent=gene-D8M19_06310;Dbxref=NCBI_GP:RUP92873.1;Name=RUP92873.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120792.1;locus_tag=D8M19_06310;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=RUP92873.1;transl_table=11 RBLY01000005.1 Genbank gene 70317 70778 . + . ID=gene-D8M19_06315;Name=D8M19_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06315 RBLY01000005.1 Protein Homology CDS 70317 70778 . + 0 ID=cds-RUP92874.1;Parent=gene-D8M19_06315;Dbxref=NCBI_GP:RUP92874.1;Name=RUP92874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120793.1;locus_tag=D8M19_06315;product=DUF3180 domain-containing protein;protein_id=RUP92874.1;transl_table=11 RBLY01000005.1 Genbank gene 70793 72058 . + . ID=gene-D8M19_06320;Name=D8M19_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06320 RBLY01000005.1 GeneMarkS+ CDS 70793 72058 . + 0 ID=cds-RUP92875.1;Parent=gene-D8M19_06320;Dbxref=NCBI_GP:RUP92875.1;Name=RUP92875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06320;product=hypothetical protein;protein_id=RUP92875.1;transl_table=11 RBLY01000005.1 Genbank gene 72157 73047 . + . ID=gene-D8M19_06325;Name=D8M19_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06325 RBLY01000005.1 Protein Homology CDS 72157 73047 . + 0 ID=cds-RUP92876.1;Parent=gene-D8M19_06325;Dbxref=NCBI_GP:RUP92876.1;Name=RUP92876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401857.1;locus_tag=D8M19_06325;product=pantoate--beta-alanine ligase;protein_id=RUP92876.1;transl_table=11 RBLY01000005.1 Genbank gene 73052 74050 . - . ID=gene-D8M19_06330;Name=D8M19_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06330 RBLY01000005.1 Protein Homology CDS 73052 74050 . - 0 ID=cds-RUP92877.1;Parent=gene-D8M19_06330;Dbxref=NCBI_GP:RUP92877.1;Name=RUP92877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120796.1;locus_tag=D8M19_06330;product=ArsA family ATPase;protein_id=RUP92877.1;transl_table=11 RBLY01000005.1 Genbank gene 74041 74304 . - . ID=gene-D8M19_06335;Name=D8M19_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06335 RBLY01000005.1 Protein Homology CDS 74041 74304 . - 0 ID=cds-RUP92878.1;Parent=gene-D8M19_06335;Dbxref=NCBI_GP:RUP92878.1;Name=RUP92878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120797.1;locus_tag=D8M19_06335;product=DNA helicase;protein_id=RUP92878.1;transl_table=11 RBLY01000005.1 Genbank gene 74327 76048 . - . ID=gene-D8M19_06340;Name=D8M19_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06340 RBLY01000005.1 Protein Homology CDS 74327 76048 . - 0 ID=cds-RUP92879.1;Parent=gene-D8M19_06340;Dbxref=NCBI_GP:RUP92879.1;Name=RUP92879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120798.1;locus_tag=D8M19_06340;product=carbon starvation protein A;protein_id=RUP92879.1;transl_table=11 RBLY01000005.1 Genbank gene 76184 77800 . + . ID=gene-D8M19_06345;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=D8M19_06345 RBLY01000005.1 Protein Homology CDS 76184 77800 . + 0 ID=cds-RUP93010.1;Parent=gene-D8M19_06345;Dbxref=NCBI_GP:RUP93010.1;Name=RUP93010.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005284792.1;locus_tag=D8M19_06345;product=lysine--tRNA ligase;protein_id=RUP93010.1;transl_table=11 RBLY01000005.1 Genbank gene 77845 79287 . + . ID=gene-D8M19_06350;Name=D8M19_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06350 RBLY01000005.1 Protein Homology CDS 77845 79287 . + 0 ID=cds-RUP92880.1;Parent=gene-D8M19_06350;Dbxref=NCBI_GP:RUP92880.1;Name=RUP92880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120800.1;locus_tag=D8M19_06350;product=DHA2 family efflux MFS transporter permease subunit;protein_id=RUP92880.1;transl_table=11 RBLY01000005.1 Genbank gene 79326 80807 . + . ID=gene-D8M19_06355;Name=D8M19_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06355 RBLY01000005.1 Protein Homology CDS 79326 80807 . + 0 ID=cds-RUP92881.1;Parent=gene-D8M19_06355;Dbxref=NCBI_GP:RUP92881.1;Name=RUP92881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120801.1;locus_tag=D8M19_06355;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=RUP92881.1;transl_table=11 RBLY01000005.1 Genbank gene 81109 83232 . + . ID=gene-D8M19_06360;Name=D8M19_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06360 RBLY01000005.1 Protein Homology CDS 81109 83232 . + 0 ID=cds-RUP92882.1;Parent=gene-D8M19_06360;Dbxref=NCBI_GP:RUP92882.1;Name=RUP92882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120802.1;locus_tag=D8M19_06360;product=YhgE/Pip domain-containing protein;protein_id=RUP92882.1;transl_table=11 RBLY01000005.1 Genbank gene 83473 86346 . + . ID=gene-D8M19_06365;Name=D8M19_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06365 RBLY01000005.1 Protein Homology CDS 83473 86346 . + 0 ID=cds-RUP92883.1;Parent=gene-D8M19_06365;Dbxref=NCBI_GP:RUP92883.1;Name=RUP92883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120803.1;locus_tag=D8M19_06365;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=RUP92883.1;transl_table=11 RBLY01000005.1 Genbank gene 86513 87817 . - . ID=gene-D8M19_06370;Name=D8M19_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06370 RBLY01000005.1 Protein Homology CDS 86513 87817 . - 0 ID=cds-RUP93011.1;Parent=gene-D8M19_06370;Dbxref=NCBI_GP:RUP93011.1;Name=RUP93011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120804.1;locus_tag=D8M19_06370;product=lipase;protein_id=RUP93011.1;transl_table=11 RBLY01000005.1 Genbank gene 88016 88801 . - . ID=gene-D8M19_06375;Name=D8M19_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06375 RBLY01000005.1 Protein Homology CDS 88016 88801 . - 0 ID=cds-RUP92884.1;Parent=gene-D8M19_06375;Dbxref=NCBI_GP:RUP92884.1;Name=RUP92884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392123.1;locus_tag=D8M19_06375;product=ABC transporter ATP-binding protein;protein_id=RUP92884.1;transl_table=11 RBLY01000005.1 Genbank gene 88801 89697 . - . ID=gene-D8M19_06380;Name=D8M19_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06380 RBLY01000005.1 Protein Homology CDS 88801 89697 . - 0 ID=cds-RUP93012.1;Parent=gene-D8M19_06380;Dbxref=NCBI_GP:RUP93012.1;Name=RUP93012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016457255.1;locus_tag=D8M19_06380;product=iron ABC transporter permease;protein_id=RUP93012.1;transl_table=11 RBLY01000005.1 Genbank gene 89787 90794 . - . ID=gene-D8M19_06385;Name=D8M19_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06385 RBLY01000005.1 Protein Homology CDS 89787 90794 . - 0 ID=cds-RUP92885.1;Parent=gene-D8M19_06385;Dbxref=NCBI_GP:RUP92885.1;Name=RUP92885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580700.1;locus_tag=D8M19_06385;product=ABC transporter substrate-binding protein;protein_id=RUP92885.1;transl_table=11 RBLY01000005.1 Genbank gene 90986 91855 . - . ID=gene-D8M19_06390;Name=D8M19_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06390 RBLY01000005.1 Protein Homology CDS 90986 91855 . - 0 ID=cds-RUP93013.1;Parent=gene-D8M19_06390;Dbxref=NCBI_GP:RUP93013.1;Name=RUP93013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329955.1;locus_tag=D8M19_06390;product=A/G-specific adenine glycosylase;protein_id=RUP93013.1;transl_table=11 RBLY01000005.1 Genbank gene 91957 92574 . + . ID=gene-D8M19_06395;Name=D8M19_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06395 RBLY01000005.1 Protein Homology CDS 91957 92574 . + 0 ID=cds-RUP92886.1;Parent=gene-D8M19_06395;Dbxref=NCBI_GP:RUP92886.1;Name=RUP92886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120806.1;locus_tag=D8M19_06395;product=carbonic anhydrase;protein_id=RUP92886.1;transl_table=11 RBLY01000005.1 Genbank gene 92785 93531 . + . ID=gene-D8M19_06400;Name=D8M19_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06400 RBLY01000005.1 GeneMarkS+ CDS 92785 93531 . + 0 ID=cds-RUP92887.1;Parent=gene-D8M19_06400;Dbxref=NCBI_GP:RUP92887.1;Name=RUP92887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06400;product=hypothetical protein;protein_id=RUP92887.1;transl_table=11 RBLY01000005.1 Genbank gene 93871 94149 . + . ID=gene-D8M19_06405;Name=D8M19_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06405 RBLY01000005.1 GeneMarkS+ CDS 93871 94149 . + 0 ID=cds-RUP92888.1;Parent=gene-D8M19_06405;Dbxref=NCBI_GP:RUP92888.1;Name=RUP92888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06405;product=hypothetical protein;protein_id=RUP92888.1;transl_table=11 RBLY01000005.1 Genbank gene 94299 95858 . - . ID=gene-D8M19_06410;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=D8M19_06410 RBLY01000005.1 Protein Homology CDS 94299 95858 . - 0 ID=cds-RUP92889.1;Parent=gene-D8M19_06410;Dbxref=NCBI_GP:RUP92889.1;Name=RUP92889.1;gbkey=CDS;gene=radA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121603.1;locus_tag=D8M19_06410;product=DNA repair protein RadA;protein_id=RUP92889.1;transl_table=11 RBLY01000005.1 Genbank gene 96046 96714 . - . ID=gene-D8M19_06415;Name=D8M19_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06415 RBLY01000005.1 Protein Homology CDS 96046 96714 . - 0 ID=cds-RUP92890.1;Parent=gene-D8M19_06415;Dbxref=NCBI_GP:RUP92890.1;Name=RUP92890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121602.1;locus_tag=D8M19_06415;product=hypothetical protein;protein_id=RUP92890.1;transl_table=11 RBLY01000005.1 Genbank gene 96952 97536 . + . ID=gene-D8M19_06420;Name=D8M19_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06420 RBLY01000005.1 Protein Homology CDS 96952 97536 . + 0 ID=cds-RUP92891.1;Parent=gene-D8M19_06420;Dbxref=NCBI_GP:RUP92891.1;Name=RUP92891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847636.1;locus_tag=D8M19_06420;product=CarD family transcriptional regulator;protein_id=RUP92891.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 97587 98381 . + . ID=gene-D8M19_06425;Name=D8M19_06425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06425;pseudo=true RBLY01000005.1 Protein Homology CDS 97587 98381 . + 0 ID=cds-D8M19_06425;Parent=gene-D8M19_06425;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769120.1;locus_tag=D8M19_06425;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 98532 99008 . + . ID=gene-D8M19_06430;Name=D8M19_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06430 RBLY01000005.1 Protein Homology CDS 98532 99008 . + 0 ID=cds-RUP93014.1;Parent=gene-D8M19_06430;Dbxref=NCBI_GP:RUP93014.1;Name=RUP93014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601858.1;locus_tag=D8M19_06430;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=RUP93014.1;transl_table=11 RBLY01000005.1 Genbank gene 99039 100562 . + . ID=gene-D8M19_06435;Name=D8M19_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06435 RBLY01000005.1 Protein Homology CDS 99039 100562 . + 0 ID=cds-RUP92892.1;Parent=gene-D8M19_06435;Dbxref=NCBI_GP:RUP92892.1;Name=RUP92892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121599.1;locus_tag=D8M19_06435;product=cysteine--tRNA ligase;protein_id=RUP92892.1;transl_table=11 RBLY01000005.1 Genbank gene 100751 101692 . + . ID=gene-D8M19_06440;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=D8M19_06440 RBLY01000005.1 Protein Homology CDS 100751 101692 . + 0 ID=cds-RUP92893.1;Parent=gene-D8M19_06440;Dbxref=NCBI_GP:RUP92893.1;Name=RUP92893.1;gbkey=CDS;gene=rlmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121598.1;locus_tag=D8M19_06440;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=RUP92893.1;transl_table=11 RBLY01000005.1 Genbank gene 102114 102944 . - . ID=gene-D8M19_06445;Name=D8M19_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06445 RBLY01000005.1 Protein Homology CDS 102114 102944 . - 0 ID=cds-RUP92894.1;Parent=gene-D8M19_06445;Dbxref=NCBI_GP:RUP92894.1;Name=RUP92894.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13338.4;locus_tag=D8M19_06445;product=hypothetical protein;protein_id=RUP92894.1;transl_table=11 RBLY01000005.1 Genbank gene 103100 104326 . + . ID=gene-D8M19_06450;Name=D8M19_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06450 RBLY01000005.1 Protein Homology CDS 103100 104326 . + 0 ID=cds-RUP92895.1;Parent=gene-D8M19_06450;Dbxref=NCBI_GP:RUP92895.1;Name=RUP92895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121596.1;locus_tag=D8M19_06450;product=RtcB family protein;protein_id=RUP92895.1;transl_table=11 RBLY01000005.1 Genbank gene 104404 105120 . + . ID=gene-D8M19_06455;Name=D8M19_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06455 RBLY01000005.1 Protein Homology CDS 104404 105120 . + 0 ID=cds-RUP92896.1;Parent=gene-D8M19_06455;Dbxref=NCBI_GP:RUP92896.1;Name=RUP92896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274195.1;locus_tag=D8M19_06455;product=DoxX family protein;protein_id=RUP92896.1;transl_table=11 RBLY01000005.1 Genbank gene 105315 106280 . - . ID=gene-D8M19_06460;Name=D8M19_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06460 RBLY01000005.1 Protein Homology CDS 105315 106280 . - 0 ID=cds-RUP92897.1;Parent=gene-D8M19_06460;Dbxref=NCBI_GP:RUP92897.1;Name=RUP92897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121594.1;locus_tag=D8M19_06460;product=metal ABC transporter permease;protein_id=RUP92897.1;transl_table=11 RBLY01000005.1 Genbank gene 106280 106969 . - . ID=gene-D8M19_06465;Name=D8M19_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06465 RBLY01000005.1 Protein Homology CDS 106280 106969 . - 0 ID=cds-RUP92898.1;Parent=gene-D8M19_06465;Dbxref=NCBI_GP:RUP92898.1;Name=RUP92898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188893.1;locus_tag=D8M19_06465;product=metal ABC transporter ATP-binding protein;protein_id=RUP92898.1;transl_table=11 RBLY01000005.1 Genbank gene 106976 107962 . - . ID=gene-D8M19_06470;Name=D8M19_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06470 RBLY01000005.1 Protein Homology CDS 106976 107962 . - 0 ID=cds-RUP92899.1;Parent=gene-D8M19_06470;Dbxref=NCBI_GP:RUP92899.1;Name=RUP92899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01297.15;locus_tag=D8M19_06470;product=ABC transporter substrate-binding protein;protein_id=RUP92899.1;transl_table=11 RBLY01000005.1 Genbank gene 108130 109236 . + . ID=gene-D8M19_06475;Name=D8M19_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06475 RBLY01000005.1 Protein Homology CDS 108130 109236 . + 0 ID=cds-RUP92900.1;Parent=gene-D8M19_06475;Dbxref=NCBI_GP:RUP92900.1;Name=RUP92900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121591.1;locus_tag=D8M19_06475;product=LacI family DNA-binding transcriptional regulator;protein_id=RUP92900.1;transl_table=11 RBLY01000005.1 Genbank gene 109321 109509 . + . ID=gene-D8M19_06480;Name=D8M19_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06480 RBLY01000005.1 Protein Homology CDS 109321 109509 . + 0 ID=cds-RUP92901.1;Parent=gene-D8M19_06480;Dbxref=NCBI_GP:RUP92901.1;Name=RUP92901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015381262.1;locus_tag=D8M19_06480;product=hypothetical protein;protein_id=RUP92901.1;transl_table=11 RBLY01000005.1 Genbank gene 109502 109987 . + . ID=gene-D8M19_06485;Name=D8M19_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06485 RBLY01000005.1 GeneMarkS+ CDS 109502 109987 . + 0 ID=cds-RUP92902.1;Parent=gene-D8M19_06485;Dbxref=NCBI_GP:RUP92902.1;Name=RUP92902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06485;product=hypothetical protein;protein_id=RUP92902.1;transl_table=11 RBLY01000005.1 Genbank gene 110138 111160 . + . ID=gene-D8M19_06490;Name=D8M19_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06490 RBLY01000005.1 Protein Homology CDS 110138 111160 . + 0 ID=cds-RUP92903.1;Parent=gene-D8M19_06490;Dbxref=NCBI_GP:RUP92903.1;Name=RUP92903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121588.1;locus_tag=D8M19_06490;product=IMP dehydrogenase;protein_id=RUP92903.1;transl_table=11 RBLY01000005.1 Genbank gene 111258 111548 . + . ID=gene-D8M19_06495;Name=D8M19_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06495 RBLY01000005.1 Protein Homology CDS 111258 111548 . + 0 ID=cds-RUP92904.1;Parent=gene-D8M19_06495;Dbxref=NCBI_GP:RUP92904.1;Name=RUP92904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301150.1;locus_tag=D8M19_06495;product=hypothetical protein;protein_id=RUP92904.1;transl_table=11 RBLY01000005.1 Genbank gene 111587 112363 . - . ID=gene-D8M19_06500;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=D8M19_06500 RBLY01000005.1 Protein Homology CDS 111587 112363 . - 0 ID=cds-RUP93015.1;Parent=gene-D8M19_06500;Dbxref=NCBI_GP:RUP93015.1;Name=RUP93015.1;gbkey=CDS;gene=otsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121586.1;locus_tag=D8M19_06500;product=trehalose-phosphatase;protein_id=RUP93015.1;transl_table=11 RBLY01000005.1 Genbank gene 112397 112870 . - . ID=gene-D8M19_06505;Name=D8M19_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06505 RBLY01000005.1 GeneMarkS+ CDS 112397 112870 . - 0 ID=cds-RUP92905.1;Parent=gene-D8M19_06505;Dbxref=NCBI_GP:RUP92905.1;Name=RUP92905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06505;product=hypothetical protein;protein_id=RUP92905.1;transl_table=11 RBLY01000005.1 Genbank gene 112984 114537 . - . ID=gene-D8M19_06510;Name=D8M19_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06510 RBLY01000005.1 Protein Homology CDS 112984 114537 . - 0 ID=cds-RUP92906.1;Parent=gene-D8M19_06510;Dbxref=NCBI_GP:RUP92906.1;Name=RUP92906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531300.1;locus_tag=D8M19_06510;product=trehalose-6-phosphate synthase;protein_id=RUP92906.1;transl_table=11 RBLY01000005.1 Genbank gene 114608 115030 . - . ID=gene-D8M19_06515;Name=D8M19_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06515 RBLY01000005.1 Protein Homology CDS 114608 115030 . - 0 ID=cds-RUP92907.1;Parent=gene-D8M19_06515;Dbxref=NCBI_GP:RUP92907.1;Name=RUP92907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121583.1;locus_tag=D8M19_06515;product=histone;protein_id=RUP92907.1;transl_table=11 RBLY01000005.1 Genbank gene 115125 116729 . - . ID=gene-D8M19_06520;Name=D8M19_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06520 RBLY01000005.1 Protein Homology CDS 115125 116729 . - 0 ID=cds-RUP92908.1;Parent=gene-D8M19_06520;Dbxref=NCBI_GP:RUP92908.1;Name=RUP92908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121582.1;locus_tag=D8M19_06520;product=threonine/serine exporter family protein;protein_id=RUP92908.1;transl_table=11 RBLY01000005.1 Genbank gene 116951 117026 . + . ID=gene-D8M19_06525;Name=D8M19_06525;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06525 RBLY01000005.1 tRNAscan-SE tRNA 116951 117026 . + . ID=rna-D8M19_06525;Parent=gene-D8M19_06525;anticodon=(pos:116984..116986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06525;product=tRNA-Thr RBLY01000005.1 tRNAscan-SE exon 116951 117026 . + . ID=exon-D8M19_06525-1;Parent=rna-D8M19_06525;anticodon=(pos:116984..116986);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06525;product=tRNA-Thr RBLY01000005.1 Genbank gene 117154 117582 . + . ID=gene-D8M19_06530;Name=D8M19_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06530 RBLY01000005.1 GeneMarkS+ CDS 117154 117582 . + 0 ID=cds-RUP92909.1;Parent=gene-D8M19_06530;Dbxref=NCBI_GP:RUP92909.1;Name=RUP92909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06530;product=hypothetical protein;protein_id=RUP92909.1;transl_table=11 RBLY01000005.1 Genbank gene 118202 118357 . + . ID=gene-D8M19_06535;Name=D8M19_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06535 RBLY01000005.1 Protein Homology CDS 118202 118357 . + 0 ID=cds-RUP92910.1;Parent=gene-D8M19_06535;Dbxref=NCBI_GP:RUP92910.1;Name=RUP92910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13333.4;locus_tag=D8M19_06535;product=hypothetical protein;protein_id=RUP92910.1;transl_table=11 RBLY01000005.1 Genbank gene 118753 124215 . + . ID=gene-D8M19_06540;Name=D8M19_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06540 RBLY01000005.1 Protein Homology CDS 118753 124215 . + 0 ID=cds-RUP92911.1;Parent=gene-D8M19_06540;Dbxref=NCBI_GP:RUP92911.1;Name=RUP92911.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08428.8%2CHMM:TIGR02331;locus_tag=D8M19_06540;product=hypothetical protein;protein_id=RUP92911.1;transl_table=11 RBLY01000005.1 Genbank gene 124424 125245 . - . ID=gene-D8M19_06545;Name=D8M19_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06545 RBLY01000005.1 Protein Homology CDS 124424 125245 . - 0 ID=cds-RUP92912.1;Parent=gene-D8M19_06545;Dbxref=NCBI_GP:RUP92912.1;Name=RUP92912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120810.1;locus_tag=D8M19_06545;product=ABC transporter permease;protein_id=RUP92912.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 125329 126291 . - . ID=gene-D8M19_06550;Name=D8M19_06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06550;pseudo=true RBLY01000005.1 Protein Homology CDS 125329 126291 . - 0 ID=cds-D8M19_06550;Parent=gene-D8M19_06550;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120811.1;locus_tag=D8M19_06550;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 126350 127417 . - . ID=gene-D8M19_06555;Name=D8M19_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06555 RBLY01000005.1 Protein Homology CDS 126350 127417 . - 0 ID=cds-RUP92913.1;Parent=gene-D8M19_06555;Dbxref=NCBI_GP:RUP92913.1;Name=RUP92913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601456.1;locus_tag=D8M19_06555;product=DUF2183 domain-containing protein;protein_id=RUP92913.1;transl_table=11 RBLY01000005.1 Genbank gene 127560 128273 . + . ID=gene-D8M19_06560;Name=D8M19_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06560 RBLY01000005.1 Protein Homology CDS 127560 128273 . + 0 ID=cds-RUP93016.1;Parent=gene-D8M19_06560;Dbxref=NCBI_GP:RUP93016.1;Name=RUP93016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120812.1;locus_tag=D8M19_06560;product=DNA-binding response regulator;protein_id=RUP93016.1;transl_table=11 RBLY01000005.1 Genbank gene 128340 129989 . + . ID=gene-D8M19_06565;Name=D8M19_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06565 RBLY01000005.1 Protein Homology CDS 128340 129989 . + 0 ID=cds-RUP92914.1;Parent=gene-D8M19_06565;Dbxref=NCBI_GP:RUP92914.1;Name=RUP92914.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02518.24;locus_tag=D8M19_06565;product=sensor histidine kinase;protein_id=RUP92914.1;transl_table=11 RBLY01000005.1 Genbank gene 130093 130518 . - . ID=gene-D8M19_06570;Name=D8M19_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06570 RBLY01000005.1 Protein Homology CDS 130093 130518 . - 0 ID=cds-RUP92915.1;Parent=gene-D8M19_06570;Dbxref=NCBI_GP:RUP92915.1;Name=RUP92915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120814.1;locus_tag=D8M19_06570;product=HIT family protein;protein_id=RUP92915.1;transl_table=11 RBLY01000005.1 Genbank gene 130585 131940 . + . ID=gene-D8M19_06575;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=D8M19_06575 RBLY01000005.1 Protein Homology CDS 130585 131940 . + 0 ID=cds-RUP92916.1;Parent=gene-D8M19_06575;Dbxref=NCBI_GP:RUP92916.1;Name=RUP92916.1;gbkey=CDS;gene=purD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014401366.1;locus_tag=D8M19_06575;product=phosphoribosylamine--glycine ligase;protein_id=RUP92916.1;transl_table=11 RBLY01000005.1 Genbank gene 132085 133527 . + . ID=gene-D8M19_06580;Name=D8M19_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06580 RBLY01000005.1 Protein Homology CDS 132085 133527 . + 0 ID=cds-RUP93017.1;Parent=gene-D8M19_06580;Dbxref=NCBI_GP:RUP93017.1;Name=RUP93017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367581.1;locus_tag=D8M19_06580;product=adenylosuccinate lyase;protein_id=RUP93017.1;transl_table=11 RBLY01000005.1 Genbank gene 133681 134580 . + . ID=gene-D8M19_06585;Name=D8M19_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06585 RBLY01000005.1 Protein Homology CDS 133681 134580 . + 0 ID=cds-RUP92917.1;Parent=gene-D8M19_06585;Dbxref=NCBI_GP:RUP92917.1;Name=RUP92917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120817.1;locus_tag=D8M19_06585;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=RUP92917.1;transl_table=11 RBLY01000005.1 Genbank gene 134679 136943 . + . ID=gene-D8M19_06590;Name=D8M19_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06590 RBLY01000005.1 Protein Homology CDS 134679 136943 . + 0 ID=cds-RUP92918.1;Parent=gene-D8M19_06590;Dbxref=NCBI_GP:RUP92918.1;Name=RUP92918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120818.1;locus_tag=D8M19_06590;product=S9 family peptidase;protein_id=RUP92918.1;transl_table=11 RBLY01000005.1 Genbank gene 137056 138387 . + . ID=gene-D8M19_06595;Name=D8M19_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06595 RBLY01000005.1 Protein Homology CDS 137056 138387 . + 0 ID=cds-RUP92919.1;Parent=gene-D8M19_06595;Dbxref=NCBI_GP:RUP92919.1;Name=RUP92919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120819.1;locus_tag=D8M19_06595;product=DUF2029 domain-containing protein;protein_id=RUP92919.1;transl_table=11 RBLY01000005.1 Genbank gene 138460 138762 . + . ID=gene-D8M19_06600;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=D8M19_06600 RBLY01000005.1 Protein Homology CDS 138460 138762 . + 0 ID=cds-RUP92920.1;Parent=gene-D8M19_06600;Dbxref=NCBI_GP:RUP92920.1;Name=RUP92920.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120820.1;locus_tag=D8M19_06600;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=RUP92920.1;transl_table=11 RBLY01000005.1 Genbank gene 138762 139442 . + . ID=gene-D8M19_06605;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=D8M19_06605 RBLY01000005.1 Protein Homology CDS 138762 139442 . + 0 ID=cds-RUP92921.1;Parent=gene-D8M19_06605;Dbxref=NCBI_GP:RUP92921.1;Name=RUP92921.1;gbkey=CDS;gene=purQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120821.1;locus_tag=D8M19_06605;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=RUP92921.1;transl_table=11 RBLY01000005.1 Genbank gene 139455 141761 . + . ID=gene-D8M19_06610;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=D8M19_06610 RBLY01000005.1 Protein Homology CDS 139455 141761 . + 0 ID=cds-RUP92922.1;Parent=gene-D8M19_06610;Dbxref=NCBI_GP:RUP92922.1;Name=RUP92922.1;gbkey=CDS;gene=purL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120822.1;locus_tag=D8M19_06610;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=RUP92922.1;transl_table=11 RBLY01000005.1 Genbank gene 141962 142669 . + . ID=gene-D8M19_06615;Name=D8M19_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06615 RBLY01000005.1 Protein Homology CDS 141962 142669 . + 0 ID=cds-RUP92923.1;Parent=gene-D8M19_06615;Dbxref=NCBI_GP:RUP92923.1;Name=RUP92923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279601.1;locus_tag=D8M19_06615;product=hemolysin III family protein;protein_id=RUP92923.1;transl_table=11 RBLY01000005.1 Genbank gene 142838 143239 . + . ID=gene-D8M19_06620;Name=D8M19_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06620 RBLY01000005.1 Protein Homology CDS 142838 143239 . + 0 ID=cds-RUP92924.1;Parent=gene-D8M19_06620;Dbxref=NCBI_GP:RUP92924.1;Name=RUP92924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325802.1;locus_tag=D8M19_06620;product=hypothetical protein;protein_id=RUP92924.1;transl_table=11 RBLY01000005.1 Genbank gene 143363 144877 . + . ID=gene-D8M19_06625;Name=D8M19_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06625 RBLY01000005.1 Protein Homology CDS 143363 144877 . + 0 ID=cds-RUP92925.1;Parent=gene-D8M19_06625;Dbxref=NCBI_GP:RUP92925.1;Name=RUP92925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120825.1;locus_tag=D8M19_06625;product=amidophosphoribosyltransferase;protein_id=RUP92925.1;transl_table=11 RBLY01000005.1 Genbank gene 144945 146027 . + . ID=gene-D8M19_06630;Name=D8M19_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06630 RBLY01000005.1 Protein Homology CDS 144945 146027 . + 0 ID=cds-RUP92926.1;Parent=gene-D8M19_06630;Dbxref=NCBI_GP:RUP92926.1;Name=RUP92926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120826.1;locus_tag=D8M19_06630;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=RUP92926.1;transl_table=11 RBLY01000005.1 Genbank gene 146179 146358 . - . ID=gene-D8M19_06635;Name=D8M19_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06635 RBLY01000005.1 Protein Homology CDS 146179 146358 . - 0 ID=cds-RUP93018.1;Parent=gene-D8M19_06635;Dbxref=NCBI_GP:RUP93018.1;Name=RUP93018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009949167.1;locus_tag=D8M19_06635;product=DUF3073 domain-containing protein;protein_id=RUP93018.1;transl_table=11 RBLY01000005.1 Genbank gene 146479 147738 . - . ID=gene-D8M19_06640;Name=D8M19_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06640 RBLY01000005.1 Protein Homology CDS 146479 147738 . - 0 ID=cds-RUP92927.1;Parent=gene-D8M19_06640;Dbxref=NCBI_GP:RUP92927.1;Name=RUP92927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120828.1;locus_tag=D8M19_06640;product=folate-binding protein;protein_id=RUP92927.1;transl_table=11 RBLY01000005.1 Genbank gene 147779 148738 . + . ID=gene-D8M19_06645;Name=D8M19_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06645 RBLY01000005.1 Protein Homology CDS 147779 148738 . + 0 ID=cds-RUP92928.1;Parent=gene-D8M19_06645;Dbxref=NCBI_GP:RUP92928.1;Name=RUP92928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582753.1;locus_tag=D8M19_06645;product=aminodeoxychorismate lyase;protein_id=RUP92928.1;transl_table=11 RBLY01000005.1 Genbank gene 148832 149449 . - . ID=gene-D8M19_06650;Name=D8M19_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06650 RBLY01000005.1 Protein Homology CDS 148832 149449 . - 0 ID=cds-RUP93019.1;Parent=gene-D8M19_06650;Dbxref=NCBI_GP:RUP93019.1;Name=RUP93019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340897.1;locus_tag=D8M19_06650;product=FABP family protein;protein_id=RUP93019.1;transl_table=11 RBLY01000005.1 Genbank gene 149601 150635 . + . ID=gene-D8M19_06655;Name=D8M19_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06655 RBLY01000005.1 Protein Homology CDS 149601 150635 . + 0 ID=cds-RUP92929.1;Parent=gene-D8M19_06655;Dbxref=NCBI_GP:RUP92929.1;Name=RUP92929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189010.1;locus_tag=D8M19_06655;product=diacylglycerol kinase family lipid kinase;protein_id=RUP92929.1;transl_table=11 RBLY01000005.1 Genbank gene 150632 151432 . - . ID=gene-D8M19_06660;Name=D8M19_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06660 RBLY01000005.1 Protein Homology CDS 150632 151432 . - 0 ID=cds-RUP92930.1;Parent=gene-D8M19_06660;Dbxref=NCBI_GP:RUP92930.1;Name=RUP92930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11209.6;locus_tag=D8M19_06660;product=DUF2993 domain-containing protein;protein_id=RUP92930.1;transl_table=11 RBLY01000005.1 Genbank gene 151463 152557 . + . ID=gene-D8M19_06665;Name=mshD;gbkey=Gene;gene=mshD;gene_biotype=protein_coding;locus_tag=D8M19_06665 RBLY01000005.1 Protein Homology CDS 151463 152557 . + 0 ID=cds-RUP92931.1;Parent=gene-D8M19_06665;Dbxref=NCBI_GP:RUP92931.1;Name=RUP92931.1;gbkey=CDS;gene=mshD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120833.1;locus_tag=D8M19_06665;product=mycothiol synthase;protein_id=RUP92931.1;transl_table=11 RBLY01000005.1 Genbank gene 152582 153730 . - . ID=gene-D8M19_06670;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=D8M19_06670 RBLY01000005.1 Protein Homology CDS 152582 153730 . - 0 ID=cds-RUP92932.1;Parent=gene-D8M19_06670;Dbxref=NCBI_GP:RUP92932.1;Name=RUP92932.1;gbkey=CDS;gene=dusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601768.2;locus_tag=D8M19_06670;product=tRNA dihydrouridine synthase DusB;protein_id=RUP92932.1;transl_table=11 RBLY01000005.1 Genbank gene 154024 155535 . + . ID=gene-D8M19_06675;Name=D8M19_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06675 RBLY01000005.1 Protein Homology CDS 154024 155535 . + 0 ID=cds-RUP92933.1;Parent=gene-D8M19_06675;Dbxref=NCBI_GP:RUP92933.1;Name=RUP92933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120840.1;locus_tag=D8M19_06675;product=acetyl-CoA hydrolase/transferase family protein;protein_id=RUP92933.1;transl_table=11 RBLY01000005.1 Genbank gene 155701 155776 . + . ID=gene-D8M19_06680;Name=D8M19_06680;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06680 RBLY01000005.1 tRNAscan-SE tRNA 155701 155776 . + . ID=rna-D8M19_06680;Parent=gene-D8M19_06680;anticodon=(pos:155734..155736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06680;product=tRNA-Lys RBLY01000005.1 tRNAscan-SE exon 155701 155776 . + . ID=exon-D8M19_06680-1;Parent=rna-D8M19_06680;anticodon=(pos:155734..155736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06680;product=tRNA-Lys RBLY01000005.1 Genbank gene 156077 158398 . - . ID=gene-D8M19_06685;Name=D8M19_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06685 RBLY01000005.1 Protein Homology CDS 156077 158398 . - 0 ID=cds-RUP92934.1;Parent=gene-D8M19_06685;Dbxref=NCBI_GP:RUP92934.1;Name=RUP92934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120842.1;locus_tag=D8M19_06685;product=copper-translocating P-type ATPase;protein_id=RUP92934.1;transl_table=11 RBLY01000005.1 Genbank gene 158427 158660 . - . ID=gene-D8M19_06690;Name=D8M19_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06690 RBLY01000005.1 Protein Homology CDS 158427 158660 . - 0 ID=cds-RUP92935.1;Parent=gene-D8M19_06690;Dbxref=NCBI_GP:RUP92935.1;Name=RUP92935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003155379.1;locus_tag=D8M19_06690;product=copper chaperone;protein_id=RUP92935.1;transl_table=11 RBLY01000005.1 Genbank gene 158805 160283 . + . ID=gene-D8M19_06695;Name=D8M19_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06695 RBLY01000005.1 Protein Homology CDS 158805 160283 . + 0 ID=cds-RUP92936.1;Parent=gene-D8M19_06695;Dbxref=NCBI_GP:RUP92936.1;Name=RUP92936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13810.4;locus_tag=D8M19_06695;product=DUF4185 domain-containing protein;protein_id=RUP92936.1;transl_table=11 RBLY01000005.1 Genbank gene 160284 160682 . - . ID=gene-D8M19_06700;Name=D8M19_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06700 RBLY01000005.1 Protein Homology CDS 160284 160682 . - 0 ID=cds-RUP92937.1;Parent=gene-D8M19_06700;Dbxref=NCBI_GP:RUP92937.1;Name=RUP92937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120845.1;locus_tag=D8M19_06700;product=transcriptional regulator;protein_id=RUP92937.1;transl_table=11 RBLY01000005.1 Genbank gene 160823 160898 . + . ID=gene-D8M19_06705;Name=D8M19_06705;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06705 RBLY01000005.1 tRNAscan-SE tRNA 160823 160898 . + . ID=rna-D8M19_06705;Parent=gene-D8M19_06705;anticodon=(pos:160857..160859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06705;product=tRNA-Glu RBLY01000005.1 tRNAscan-SE exon 160823 160898 . + . ID=exon-D8M19_06705-1;Parent=rna-D8M19_06705;anticodon=(pos:160857..160859);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06705;product=tRNA-Glu RBLY01000005.1 Genbank gene 160927 161003 . + . ID=gene-D8M19_06710;Name=D8M19_06710;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06710 RBLY01000005.1 tRNAscan-SE tRNA 160927 161003 . + . ID=rna-D8M19_06710;Parent=gene-D8M19_06710;anticodon=(pos:160961..160963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06710;product=tRNA-Asp RBLY01000005.1 tRNAscan-SE exon 160927 161003 . + . ID=exon-D8M19_06710-1;Parent=rna-D8M19_06710;anticodon=(pos:160961..160963);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06710;product=tRNA-Asp RBLY01000005.1 Genbank gene 161121 162035 . - . ID=gene-D8M19_06715;Name=D8M19_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06715 RBLY01000005.1 Protein Homology CDS 161121 162035 . - 0 ID=cds-RUP92938.1;Parent=gene-D8M19_06715;Dbxref=NCBI_GP:RUP92938.1;Name=RUP92938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530041.1;locus_tag=D8M19_06715;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=RUP92938.1;transl_table=11 RBLY01000005.1 Genbank gene 162183 162256 . + . ID=gene-D8M19_06720;Name=D8M19_06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06720 RBLY01000005.1 tRNAscan-SE tRNA 162183 162256 . + . ID=rna-D8M19_06720;Parent=gene-D8M19_06720;anticodon=(pos:162217..162219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06720;product=tRNA-Asp RBLY01000005.1 tRNAscan-SE exon 162183 162256 . + . ID=exon-D8M19_06720-1;Parent=rna-D8M19_06720;anticodon=(pos:162217..162219);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06720;product=tRNA-Asp RBLY01000005.1 Genbank gene 162311 162383 . + . ID=gene-D8M19_06725;Name=D8M19_06725;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06725 RBLY01000005.1 tRNAscan-SE tRNA 162311 162383 . + . ID=rna-D8M19_06725;Parent=gene-D8M19_06725;anticodon=(pos:162344..162346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06725;product=tRNA-Phe RBLY01000005.1 tRNAscan-SE exon 162311 162383 . + . ID=exon-D8M19_06725-1;Parent=rna-D8M19_06725;anticodon=(pos:162344..162346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06725;product=tRNA-Phe RBLY01000005.1 Genbank gene 162856 163149 . + . ID=gene-D8M19_06730;Name=D8M19_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06730 RBLY01000005.1 Protein Homology CDS 162856 163149 . + 0 ID=cds-RUP92939.1;Parent=gene-D8M19_06730;Dbxref=NCBI_GP:RUP92939.1;Name=RUP92939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120847.1;locus_tag=D8M19_06730;product=N-acetyltransferase;protein_id=RUP92939.1;transl_table=11 RBLY01000005.1 Genbank gene 163463 164029 . - . ID=gene-D8M19_06735;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=D8M19_06735 RBLY01000005.1 Protein Homology CDS 163463 164029 . - 0 ID=cds-RUP92940.1;Parent=gene-D8M19_06735;Dbxref=NCBI_GP:RUP92940.1;Name=RUP92940.1;gbkey=CDS;gene=cysE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769197.1;locus_tag=D8M19_06735;product=serine O-acetyltransferase;protein_id=RUP92940.1;transl_table=11 RBLY01000005.1 Genbank gene 164050 164985 . - . ID=gene-D8M19_06740;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=D8M19_06740 RBLY01000005.1 Protein Homology CDS 164050 164985 . - 0 ID=cds-RUP92941.1;Parent=gene-D8M19_06740;Dbxref=NCBI_GP:RUP92941.1;Name=RUP92941.1;gbkey=CDS;gene=cysK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297416.1;locus_tag=D8M19_06740;product=cysteine synthase A;protein_id=RUP92941.1;transl_table=11 RBLY01000005.1 Genbank gene 165305 166147 . + . ID=gene-D8M19_06745;Name=D8M19_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06745 RBLY01000005.1 Protein Homology CDS 165305 166147 . + 0 ID=cds-RUP92942.1;Parent=gene-D8M19_06745;Dbxref=NCBI_GP:RUP92942.1;Name=RUP92942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823120.1;locus_tag=D8M19_06745;product=GAF domain-containing protein;protein_id=RUP92942.1;transl_table=11 RBLY01000005.1 Genbank gene 166178 167440 . + . ID=gene-D8M19_06750;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=D8M19_06750 RBLY01000005.1 Protein Homology CDS 166178 167440 . + 0 ID=cds-RUP92943.1;Parent=gene-D8M19_06750;Dbxref=NCBI_GP:RUP92943.1;Name=RUP92943.1;gbkey=CDS;gene=murA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857072.1;locus_tag=D8M19_06750;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=RUP92943.1;transl_table=11 RBLY01000005.1 Genbank gene 167567 168385 . + . ID=gene-D8M19_06755;Name=D8M19_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06755 RBLY01000005.1 Protein Homology CDS 167567 168385 . + 0 ID=cds-RUP92944.1;Parent=gene-D8M19_06755;Dbxref=NCBI_GP:RUP92944.1;Name=RUP92944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120852.1;locus_tag=D8M19_06755;product=ABC transporter ATP-binding protein;protein_id=RUP92944.1;transl_table=11 RBLY01000005.1 Genbank gene 168388 171003 . + . ID=gene-D8M19_06760;Name=D8M19_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06760 RBLY01000005.1 Protein Homology CDS 168388 171003 . + 0 ID=cds-RUP92945.1;Parent=gene-D8M19_06760;Dbxref=NCBI_GP:RUP92945.1;Name=RUP92945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010191299.1;locus_tag=D8M19_06760;product=FtsX-like permease family protein;protein_id=RUP92945.1;transl_table=11 RBLY01000005.1 Genbank gene 171089 171526 . + . ID=gene-D8M19_06765;Name=D8M19_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06765 RBLY01000005.1 Protein Homology CDS 171089 171526 . + 0 ID=cds-RUP93020.1;Parent=gene-D8M19_06765;Dbxref=NCBI_GP:RUP93020.1;Name=RUP93020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005532189.1;locus_tag=D8M19_06765;product=DoxX family membrane protein;protein_id=RUP93020.1;transl_table=11 RBLY01000005.1 Genbank gene 171592 172311 . + . ID=gene-D8M19_06770;Name=D8M19_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06770 RBLY01000005.1 Protein Homology CDS 171592 172311 . + 0 ID=cds-RUP92946.1;Parent=gene-D8M19_06770;Dbxref=NCBI_GP:RUP92946.1;Name=RUP92946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13462.4;locus_tag=D8M19_06770;product=hypothetical protein;protein_id=RUP92946.1;transl_table=11 RBLY01000005.1 Genbank gene 172494 172566 . + . ID=gene-D8M19_06775;Name=D8M19_06775;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06775 RBLY01000005.1 tRNAscan-SE tRNA 172494 172566 . + . ID=rna-D8M19_06775;Parent=gene-D8M19_06775;anticodon=(pos:172527..172529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06775;product=tRNA-Ala RBLY01000005.1 tRNAscan-SE exon 172494 172566 . + . ID=exon-D8M19_06775-1;Parent=rna-D8M19_06775;anticodon=(pos:172527..172529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06775;product=tRNA-Ala RBLY01000005.1 Genbank pseudogene 172736 173907 . - . ID=gene-D8M19_06780;Name=D8M19_06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06780;pseudo=true RBLY01000005.1 Protein Homology CDS 172736 173907 . - 0 ID=cds-D8M19_06780;Parent=gene-D8M19_06780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309864.1;locus_tag=D8M19_06780;product=IS1249 family transposase;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 174298 174483 . + . ID=gene-D8M19_06785;Name=D8M19_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06785 RBLY01000005.1 GeneMarkS+ CDS 174298 174483 . + 0 ID=cds-RUP92947.1;Parent=gene-D8M19_06785;Dbxref=NCBI_GP:RUP92947.1;Name=RUP92947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_06785;product=hypothetical protein;protein_id=RUP92947.1;transl_table=11 RBLY01000005.1 Genbank gene 174563 175753 . - . ID=gene-D8M19_06790;Name=D8M19_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06790 RBLY01000005.1 Protein Homology CDS 174563 175753 . - 0 ID=cds-RUP92948.1;Parent=gene-D8M19_06790;Dbxref=NCBI_GP:RUP92948.1;Name=RUP92948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120857.1;locus_tag=D8M19_06790;product=cytochrome P450;protein_id=RUP92948.1;transl_table=11 RBLY01000005.1 Genbank gene 175850 176392 . + . ID=gene-D8M19_06795;Name=D8M19_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06795 RBLY01000005.1 Protein Homology CDS 175850 176392 . + 0 ID=cds-RUP92949.1;Parent=gene-D8M19_06795;Dbxref=NCBI_GP:RUP92949.1;Name=RUP92949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120858.1;locus_tag=D8M19_06795;product=hypothetical protein;protein_id=RUP92949.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 176445 177206 . - . ID=gene-D8M19_06800;Name=D8M19_06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06800;pseudo=true RBLY01000005.1 Protein Homology CDS 176445 177206 . - 0 ID=cds-D8M19_06800;Parent=gene-D8M19_06800;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120859.1;locus_tag=D8M19_06800;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 177345 178103 . + . ID=gene-D8M19_06805;Name=D8M19_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06805 RBLY01000005.1 Protein Homology CDS 177345 178103 . + 0 ID=cds-RUP92950.1;Parent=gene-D8M19_06805;Dbxref=NCBI_GP:RUP92950.1;Name=RUP92950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120860.1;locus_tag=D8M19_06805;product=fructosamine kinase;protein_id=RUP92950.1;transl_table=11 RBLY01000005.1 Genbank gene 178111 178965 . - . ID=gene-D8M19_06810;Name=D8M19_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06810 RBLY01000005.1 Protein Homology CDS 178111 178965 . - 0 ID=cds-RUP92951.1;Parent=gene-D8M19_06810;Dbxref=NCBI_GP:RUP92951.1;Name=RUP92951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120861.1;locus_tag=D8M19_06810;product=ammonia-dependent NAD(+) synthetase;protein_id=RUP92951.1;transl_table=11 RBLY01000005.1 Genbank gene 179007 180428 . + . ID=gene-D8M19_06815;Name=D8M19_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06815 RBLY01000005.1 Protein Homology CDS 179007 180428 . + 0 ID=cds-RUP92952.1;Parent=gene-D8M19_06815;Dbxref=NCBI_GP:RUP92952.1;Name=RUP92952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120862.1;locus_tag=D8M19_06815;product=sugar porter family MFS transporter;protein_id=RUP92952.1;transl_table=11 RBLY01000005.1 Genbank gene 180613 180735 . + . ID=gene-D8M19_06820;Name=D8M19_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06820 RBLY01000005.1 Protein Homology CDS 180613 180735 . + 0 ID=cds-RUP92953.1;Parent=gene-D8M19_06820;Dbxref=NCBI_GP:RUP92953.1;Name=RUP92953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004600465.1;locus_tag=D8M19_06820;product=50S ribosomal protein L36;protein_id=RUP92953.1;transl_table=11 RBLY01000005.1 Genbank gene 181198 181443 . + . ID=gene-D8M19_06825;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=D8M19_06825 RBLY01000005.1 Protein Homology CDS 181198 181443 . + 0 ID=cds-RUP92954.1;Parent=gene-D8M19_06825;Dbxref=NCBI_GP:RUP92954.1;Name=RUP92954.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601732.1;locus_tag=D8M19_06825;product=glutaredoxin-like protein NrdH;protein_id=RUP92954.1;transl_table=11 RBLY01000005.1 Genbank gene 181588 182028 . + . ID=gene-D8M19_06830;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=D8M19_06830 RBLY01000005.1 Protein Homology CDS 181588 182028 . + 0 ID=cds-RUP92955.1;Parent=gene-D8M19_06830;Dbxref=NCBI_GP:RUP92955.1;Name=RUP92955.1;gbkey=CDS;gene=nrdI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242527.1;locus_tag=D8M19_06830;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=RUP92955.1;transl_table=11 RBLY01000005.1 Genbank gene 182121 184283 . + . ID=gene-D8M19_06835;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=D8M19_06835 RBLY01000005.1 Protein Homology CDS 182121 184283 . + 0 ID=cds-RUP92956.1;Parent=gene-D8M19_06835;Dbxref=NCBI_GP:RUP92956.1;Name=RUP92956.1;gbkey=CDS;gene=nrdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012715276.1;locus_tag=D8M19_06835;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=RUP92956.1;transl_table=11 RBLY01000005.1 Genbank gene 184336 185097 . - . ID=gene-D8M19_06840;Name=D8M19_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06840 RBLY01000005.1 Protein Homology CDS 184336 185097 . - 0 ID=cds-RUP92957.1;Parent=gene-D8M19_06840;Dbxref=NCBI_GP:RUP92957.1;Name=RUP92957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120868.1;locus_tag=D8M19_06840;product=FadR family transcriptional regulator;protein_id=RUP92957.1;transl_table=11 RBLY01000005.1 Genbank gene 185272 186255 . + . ID=gene-D8M19_06845;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=D8M19_06845 RBLY01000005.1 Protein Homology CDS 185272 186255 . + 0 ID=cds-RUP92958.1;Parent=gene-D8M19_06845;Dbxref=NCBI_GP:RUP92958.1;Name=RUP92958.1;gbkey=CDS;gene=nrdF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120869.1;locus_tag=D8M19_06845;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=RUP92958.1;transl_table=11 RBLY01000005.1 Genbank gene 186670 188412 . + . ID=gene-D8M19_06850;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=D8M19_06850 RBLY01000005.1 Protein Homology CDS 186670 188412 . + 0 ID=cds-RUP92959.1;Parent=gene-D8M19_06850;Dbxref=NCBI_GP:RUP92959.1;Name=RUP92959.1;gbkey=CDS;gene=ctaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120870.1;locus_tag=D8M19_06850;product=cytochrome c oxidase subunit I;protein_id=RUP92959.1;transl_table=11 RBLY01000005.1 Genbank gene 188653 189954 . + . ID=gene-D8M19_06855;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=D8M19_06855 RBLY01000005.1 Protein Homology CDS 188653 189954 . + 0 ID=cds-RUP92960.1;Parent=gene-D8M19_06855;Dbxref=NCBI_GP:RUP92960.1;Name=RUP92960.1;gbkey=CDS;gene=serB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018859.1;locus_tag=D8M19_06855;product=phosphoserine phosphatase SerB;protein_id=RUP92960.1;transl_table=11 RBLY01000005.1 Genbank gene 189995 192133 . - . ID=gene-D8M19_06860;Name=D8M19_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06860 RBLY01000005.1 Protein Homology CDS 189995 192133 . - 0 ID=cds-RUP92961.1;Parent=gene-D8M19_06860;Dbxref=NCBI_GP:RUP92961.1;Name=RUP92961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120873.1;locus_tag=D8M19_06860;product=ATP-dependent DNA helicase;protein_id=RUP92961.1;transl_table=11 RBLY01000005.1 Genbank gene 192134 193477 . - . ID=gene-D8M19_06865;Name=D8M19_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06865 RBLY01000005.1 Protein Homology CDS 192134 193477 . - 0 ID=cds-RUP92962.1;Parent=gene-D8M19_06865;Dbxref=NCBI_GP:RUP92962.1;Name=RUP92962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120874.1;locus_tag=D8M19_06865;product=nicotinate phosphoribosyltransferase;protein_id=RUP92962.1;transl_table=11 RBLY01000005.1 Genbank gene 193702 194013 . + . ID=gene-D8M19_06870;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=D8M19_06870 RBLY01000005.1 Protein Homology CDS 193702 194013 . + 0 ID=cds-RUP93021.1;Parent=gene-D8M19_06870;Dbxref=NCBI_GP:RUP93021.1;Name=RUP93021.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822121.1;locus_tag=D8M19_06870;product=ATP-dependent Clp protease adapter ClpS;protein_id=RUP93021.1;transl_table=11 RBLY01000005.1 Genbank gene 194065 194598 . + . ID=gene-D8M19_06875;Name=D8M19_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06875 RBLY01000005.1 Protein Homology CDS 194065 194598 . + 0 ID=cds-RUP92963.1;Parent=gene-D8M19_06875;Dbxref=NCBI_GP:RUP92963.1;Name=RUP92963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120876.1;locus_tag=D8M19_06875;product=DUF2017 domain-containing protein;protein_id=RUP92963.1;transl_table=11 RBLY01000005.1 Genbank gene 194613 195698 . + . ID=gene-D8M19_06880;Name=D8M19_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06880 RBLY01000005.1 Protein Homology CDS 194613 195698 . + 0 ID=cds-RUP92964.1;Parent=gene-D8M19_06880;Dbxref=NCBI_GP:RUP92964.1;Name=RUP92964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120877.1;locus_tag=D8M19_06880;product=peptidase S58 family protein;protein_id=RUP92964.1;transl_table=11 RBLY01000005.1 Genbank gene 195714 196424 . + . ID=gene-D8M19_06885;Name=D8M19_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06885 RBLY01000005.1 Protein Homology CDS 195714 196424 . + 0 ID=cds-RUP92965.1;Parent=gene-D8M19_06885;Dbxref=NCBI_GP:RUP92965.1;Name=RUP92965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120878.1;locus_tag=D8M19_06885;product=rhomboid family intramembrane serine protease;protein_id=RUP92965.1;transl_table=11 RBLY01000005.1 Genbank gene 196587 197420 . + . ID=gene-D8M19_06890;Name=D8M19_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06890 RBLY01000005.1 Protein Homology CDS 196587 197420 . + 0 ID=cds-RUP92966.1;Parent=gene-D8M19_06890;Dbxref=NCBI_GP:RUP92966.1;Name=RUP92966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120879.1;locus_tag=D8M19_06890;product=glutamate racemase;protein_id=RUP92966.1;transl_table=11 RBLY01000005.1 Genbank gene 197489 198262 . + . ID=gene-D8M19_06895;Name=D8M19_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06895 RBLY01000005.1 Protein Homology CDS 197489 198262 . + 0 ID=cds-RUP92967.1;Parent=gene-D8M19_06895;Dbxref=NCBI_GP:RUP92967.1;Name=RUP92967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531079.1;locus_tag=D8M19_06895;product=MBL fold metallo-hydrolase;protein_id=RUP92967.1;transl_table=11 RBLY01000005.1 Genbank gene 198280 199083 . + . ID=gene-D8M19_06900;Name=D8M19_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06900 RBLY01000005.1 Protein Homology CDS 198280 199083 . + 0 ID=cds-RUP92968.1;Parent=gene-D8M19_06900;Dbxref=NCBI_GP:RUP92968.1;Name=RUP92968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120882.1;locus_tag=D8M19_06900;product=ribonuclease PH;protein_id=RUP92968.1;transl_table=11 RBLY01000005.1 Genbank gene 199083 199724 . + . ID=gene-D8M19_06905;Name=D8M19_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06905 RBLY01000005.1 Protein Homology CDS 199083 199724 . + 0 ID=cds-RUP92969.1;Parent=gene-D8M19_06905;Dbxref=NCBI_GP:RUP92969.1;Name=RUP92969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327300.1;locus_tag=D8M19_06905;product=non-canonical purine NTP pyrophosphatase;protein_id=RUP92969.1;transl_table=11 RBLY01000005.1 Genbank gene 199788 200150 . - . ID=gene-D8M19_06910;Name=D8M19_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06910 RBLY01000005.1 Protein Homology CDS 199788 200150 . - 0 ID=cds-RUP92970.1;Parent=gene-D8M19_06910;Dbxref=NCBI_GP:RUP92970.1;Name=RUP92970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120884.1;locus_tag=D8M19_06910;product=DUF3817 domain-containing protein;protein_id=RUP92970.1;transl_table=11 RBLY01000005.1 Genbank gene 200150 200587 . - . ID=gene-D8M19_06915;Name=D8M19_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06915 RBLY01000005.1 Protein Homology CDS 200150 200587 . - 0 ID=cds-RUP92971.1;Parent=gene-D8M19_06915;Dbxref=NCBI_GP:RUP92971.1;Name=RUP92971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120885.1;locus_tag=D8M19_06915;product=hypothetical protein;protein_id=RUP92971.1;transl_table=11 RBLY01000005.1 Genbank gene 200660 200741 . + . ID=gene-D8M19_06920;Name=D8M19_06920;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06920 RBLY01000005.1 tRNAscan-SE tRNA 200660 200741 . + . ID=rna-D8M19_06920;Parent=gene-D8M19_06920;anticodon=(pos:200694..200696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06920;product=tRNA-Leu RBLY01000005.1 tRNAscan-SE exon 200660 200741 . + . ID=exon-D8M19_06920-1;Parent=rna-D8M19_06920;anticodon=(pos:200694..200696);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06920;product=tRNA-Leu RBLY01000005.1 Genbank gene 200861 201472 . - . ID=gene-D8M19_06925;Name=D8M19_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06925 RBLY01000005.1 Protein Homology CDS 200861 201472 . - 0 ID=cds-RUP92972.1;Parent=gene-D8M19_06925;Dbxref=NCBI_GP:RUP92972.1;Name=RUP92972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120888.1;locus_tag=D8M19_06925;product=class I SAM-dependent methyltransferase;protein_id=RUP92972.1;transl_table=11 RBLY01000005.1 Genbank gene 201579 202400 . - . ID=gene-D8M19_06930;Name=D8M19_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06930 RBLY01000005.1 Protein Homology CDS 201579 202400 . - 0 ID=cds-RUP93022.1;Parent=gene-D8M19_06930;Dbxref=NCBI_GP:RUP93022.1;Name=RUP93022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014008574.1;locus_tag=D8M19_06930;product=SDR family oxidoreductase;protein_id=RUP93022.1;transl_table=11 RBLY01000005.1 Genbank gene 202640 203560 . + . ID=gene-D8M19_06935;Name=D8M19_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06935 RBLY01000005.1 Protein Homology CDS 202640 203560 . + 0 ID=cds-RUP92973.1;Parent=gene-D8M19_06935;Dbxref=NCBI_GP:RUP92973.1;Name=RUP92973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277794.1;locus_tag=D8M19_06935;product=SPFH domain-containing protein;protein_id=RUP92973.1;transl_table=11 RBLY01000005.1 Genbank gene 203564 205093 . + . ID=gene-D8M19_06940;Name=D8M19_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06940 RBLY01000005.1 Protein Homology CDS 203564 205093 . + 0 ID=cds-RUP92974.1;Parent=gene-D8M19_06940;Dbxref=NCBI_GP:RUP92974.1;Name=RUP92974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005530589.1;locus_tag=D8M19_06940;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=RUP92974.1;transl_table=11 RBLY01000005.1 Genbank gene 205090 205767 . + . ID=gene-D8M19_06945;Name=D8M19_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06945 RBLY01000005.1 Protein Homology CDS 205090 205767 . + 0 ID=cds-RUP92975.1;Parent=gene-D8M19_06945;Dbxref=NCBI_GP:RUP92975.1;Name=RUP92975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014366995.1;locus_tag=D8M19_06945;product=dethiobiotin synthase;protein_id=RUP92975.1;transl_table=11 RBLY01000005.1 Genbank gene 205772 206176 . + . ID=gene-D8M19_06950;Name=D8M19_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06950 RBLY01000005.1 Protein Homology CDS 205772 206176 . + 0 ID=cds-RUP92976.1;Parent=gene-D8M19_06950;Dbxref=NCBI_GP:RUP92976.1;Name=RUP92976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120893.1;locus_tag=D8M19_06950;product=holo-ACP synthase;protein_id=RUP92976.1;transl_table=11 RBLY01000005.1 Genbank gene 206214 206834 . - . ID=gene-D8M19_06955;Name=D8M19_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06955 RBLY01000005.1 Protein Homology CDS 206214 206834 . - 0 ID=cds-RUP92977.1;Parent=gene-D8M19_06955;Dbxref=NCBI_GP:RUP92977.1;Name=RUP92977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120894.1;locus_tag=D8M19_06955;product=TetR/AcrR family transcriptional regulator;protein_id=RUP92977.1;transl_table=11 RBLY01000005.1 Genbank gene 206910 207380 . - . ID=gene-D8M19_06960;Name=D8M19_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06960 RBLY01000005.1 Protein Homology CDS 206910 207380 . - 0 ID=cds-RUP92978.1;Parent=gene-D8M19_06960;Dbxref=NCBI_GP:RUP92978.1;Name=RUP92978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120895.1;locus_tag=D8M19_06960;product=thioredoxin-dependent thiol peroxidase;protein_id=RUP92978.1;transl_table=11 RBLY01000005.1 Genbank gene 207617 207898 . + . ID=gene-D8M19_06965;Name=D8M19_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06965 RBLY01000005.1 Protein Homology CDS 207617 207898 . + 0 ID=cds-RUP92979.1;Parent=gene-D8M19_06965;Dbxref=NCBI_GP:RUP92979.1;Name=RUP92979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120896.1;locus_tag=D8M19_06965;product=DUF3618 domain-containing protein;protein_id=RUP92979.1;transl_table=11 RBLY01000005.1 Genbank gene 207938 208522 . - . ID=gene-D8M19_06970;Name=D8M19_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06970 RBLY01000005.1 Protein Homology CDS 207938 208522 . - 0 ID=cds-RUP92980.1;Parent=gene-D8M19_06970;Dbxref=NCBI_GP:RUP92980.1;Name=RUP92980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531047.1;locus_tag=D8M19_06970;product=nicotinamidase;protein_id=RUP92980.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 208631 209947 . + . ID=gene-D8M19_06975;Name=D8M19_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_06975;pseudo=true RBLY01000005.1 Protein Homology CDS 208631 209947 . + 0 ID=cds-D8M19_06975;Parent=gene-D8M19_06975;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120898.1;locus_tag=D8M19_06975;product=glutaminase;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 210043 210834 . + . ID=gene-D8M19_06980;Name=D8M19_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06980 RBLY01000005.1 Protein Homology CDS 210043 210834 . + 0 ID=cds-RUP92981.1;Parent=gene-D8M19_06980;Dbxref=NCBI_GP:RUP92981.1;Name=RUP92981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00378.18;locus_tag=D8M19_06980;product=enoyl-CoA hydratase;protein_id=RUP92981.1;transl_table=11 RBLY01000005.1 Genbank gene 210982 211057 . - . ID=gene-D8M19_06985;Name=D8M19_06985;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_06985 RBLY01000005.1 tRNAscan-SE tRNA 210982 211057 . - . ID=rna-D8M19_06985;Parent=gene-D8M19_06985;anticodon=(pos:complement(211022..211024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06985;product=tRNA-Lys RBLY01000005.1 tRNAscan-SE exon 210982 211057 . - . ID=exon-D8M19_06985-1;Parent=rna-D8M19_06985;anticodon=(pos:complement(211022..211024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_06985;product=tRNA-Lys RBLY01000005.1 Genbank gene 211453 212601 . + . ID=gene-D8M19_06990;Name=D8M19_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06990 RBLY01000005.1 Protein Homology CDS 211453 212601 . + 0 ID=cds-RUP93023.1;Parent=gene-D8M19_06990;Dbxref=NCBI_GP:RUP93023.1;Name=RUP93023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120900.1;locus_tag=D8M19_06990;product=transpeptidase;protein_id=RUP93023.1;transl_table=11 RBLY01000005.1 Genbank gene 212717 215143 . + . ID=gene-D8M19_06995;Name=D8M19_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_06995 RBLY01000005.1 Protein Homology CDS 212717 215143 . + 0 ID=cds-RUP93024.1;Parent=gene-D8M19_06995;Dbxref=NCBI_GP:RUP93024.1;Name=RUP93024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188273.1;locus_tag=D8M19_06995;product=ATP-dependent RNA helicase;protein_id=RUP93024.1;transl_table=11 RBLY01000005.1 Genbank gene 215147 215815 . - . ID=gene-D8M19_07000;Name=D8M19_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07000 RBLY01000005.1 Protein Homology CDS 215147 215815 . - 0 ID=cds-RUP92982.1;Parent=gene-D8M19_07000;Dbxref=NCBI_GP:RUP92982.1;Name=RUP92982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120902.1;locus_tag=D8M19_07000;product=GntR family transcriptional regulator;protein_id=RUP92982.1;transl_table=11 RBLY01000005.1 Genbank gene 215937 216012 . - . ID=gene-D8M19_07005;Name=D8M19_07005;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_07005 RBLY01000005.1 tRNAscan-SE tRNA 215937 216012 . - . ID=rna-D8M19_07005;Parent=gene-D8M19_07005;anticodon=(pos:complement(215977..215979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07005;product=tRNA-His RBLY01000005.1 tRNAscan-SE exon 215937 216012 . - . ID=exon-D8M19_07005-1;Parent=rna-D8M19_07005;anticodon=(pos:complement(215977..215979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07005;product=tRNA-His RBLY01000005.1 Genbank gene 216062 216742 . - . ID=gene-D8M19_07010;Name=D8M19_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07010 RBLY01000005.1 Protein Homology CDS 216062 216742 . - 0 ID=cds-RUP92983.1;Parent=gene-D8M19_07010;Dbxref=NCBI_GP:RUP92983.1;Name=RUP92983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120908.1;locus_tag=D8M19_07010;product=oligoribonuclease;protein_id=RUP92983.1;transl_table=11 RBLY01000005.1 Genbank gene 216826 217623 . - . ID=gene-D8M19_07015;Name=D8M19_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07015 RBLY01000005.1 Protein Homology CDS 216826 217623 . - 0 ID=cds-RUP92984.1;Parent=gene-D8M19_07015;Dbxref=NCBI_GP:RUP92984.1;Name=RUP92984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120909.1;locus_tag=D8M19_07015;product=SDR family oxidoreductase;protein_id=RUP92984.1;transl_table=11 RBLY01000005.1 Genbank gene 217792 218286 . - . ID=gene-D8M19_07020;Name=D8M19_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07020 RBLY01000005.1 Protein Homology CDS 217792 218286 . - 0 ID=cds-RUP92985.1;Parent=gene-D8M19_07020;Dbxref=NCBI_GP:RUP92985.1;Name=RUP92985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078208.1;locus_tag=D8M19_07020;product=N-acetyltransferase;protein_id=RUP92985.1;transl_table=11 RBLY01000005.1 Genbank gene 218627 218866 . - . ID=gene-D8M19_07025;Name=D8M19_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07025 RBLY01000005.1 GeneMarkS+ CDS 218627 218866 . - 0 ID=cds-RUP92986.1;Parent=gene-D8M19_07025;Dbxref=NCBI_GP:RUP92986.1;Name=RUP92986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07025;product=hypothetical protein;protein_id=RUP92986.1;transl_table=11 RBLY01000005.1 Genbank gene 219078 220349 . - . ID=gene-D8M19_07030;Name=D8M19_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07030 RBLY01000005.1 GeneMarkS+ CDS 219078 220349 . - 0 ID=cds-RUP92987.1;Parent=gene-D8M19_07030;Dbxref=NCBI_GP:RUP92987.1;Name=RUP92987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07030;product=hypothetical protein;protein_id=RUP92987.1;transl_table=11 RBLY01000005.1 Genbank gene 220348 220977 . + . ID=gene-D8M19_07035;Name=D8M19_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07035 RBLY01000005.1 GeneMarkS+ CDS 220348 220977 . + 0 ID=cds-RUP92988.1;Parent=gene-D8M19_07035;Dbxref=NCBI_GP:RUP92988.1;Name=RUP92988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07035;product=hypothetical protein;protein_id=RUP92988.1;transl_table=11 RBLY01000005.1 Genbank gene 221486 221815 . - . ID=gene-D8M19_07040;Name=D8M19_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07040 RBLY01000005.1 GeneMarkS+ CDS 221486 221815 . - 0 ID=cds-RUP92989.1;Parent=gene-D8M19_07040;Dbxref=NCBI_GP:RUP92989.1;Name=RUP92989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07040;product=hypothetical protein;protein_id=RUP92989.1;transl_table=11 RBLY01000005.1 Genbank gene 221923 223599 . - . ID=gene-D8M19_07045;Name=D8M19_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07045 RBLY01000005.1 GeneMarkS+ CDS 221923 223599 . - 0 ID=cds-RUP92990.1;Parent=gene-D8M19_07045;Dbxref=NCBI_GP:RUP92990.1;Name=RUP92990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07045;product=hypothetical protein;protein_id=RUP92990.1;transl_table=11 RBLY01000005.1 Genbank gene 223556 224032 . - . ID=gene-D8M19_07050;Name=D8M19_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07050 RBLY01000005.1 Protein Homology CDS 223556 224032 . - 0 ID=cds-RUP93025.1;Parent=gene-D8M19_07050;Dbxref=NCBI_GP:RUP93025.1;Name=RUP93025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13560.4;locus_tag=D8M19_07050;product=helix-turn-helix domain-containing protein;protein_id=RUP93025.1;transl_table=11 RBLY01000005.1 Genbank gene 223902 225014 . + . ID=gene-D8M19_07055;Name=D8M19_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07055 RBLY01000005.1 Protein Homology CDS 223902 225014 . + 0 ID=cds-RUP92991.1;Parent=gene-D8M19_07055;Dbxref=NCBI_GP:RUP92991.1;Name=RUP92991.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00145.15;locus_tag=D8M19_07055;product=DNA cytosine methyltransferase;protein_id=RUP92991.1;transl_table=11 RBLY01000005.1 Genbank gene 225897 226256 . + . ID=gene-D8M19_07060;Name=D8M19_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07060 RBLY01000005.1 GeneMarkS+ CDS 225897 226256 . + 0 ID=cds-RUP92992.1;Parent=gene-D8M19_07060;Dbxref=NCBI_GP:RUP92992.1;Name=RUP92992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07060;product=hypothetical protein;protein_id=RUP92992.1;transl_table=11 RBLY01000005.1 Genbank gene 226504 226577 . - . ID=gene-D8M19_07065;Name=D8M19_07065;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_07065 RBLY01000005.1 tRNAscan-SE tRNA 226504 226577 . - . ID=rna-D8M19_07065;Parent=gene-D8M19_07065;anticodon=(pos:complement(226541..226543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07065;product=tRNA-Arg RBLY01000005.1 tRNAscan-SE exon 226504 226577 . - . ID=exon-D8M19_07065-1;Parent=rna-D8M19_07065;anticodon=(pos:complement(226541..226543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07065;product=tRNA-Arg RBLY01000005.1 Genbank gene 226702 228951 . + . ID=gene-D8M19_07070;Name=D8M19_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07070 RBLY01000005.1 Protein Homology CDS 226702 228951 . + 0 ID=cds-RUP92993.1;Parent=gene-D8M19_07070;Dbxref=NCBI_GP:RUP92993.1;Name=RUP92993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120910.1;locus_tag=D8M19_07070;product=copper resistance protein;protein_id=RUP92993.1;transl_table=11 RBLY01000005.1 Genbank gene 229018 230019 . + . ID=gene-D8M19_07075;Name=D8M19_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07075 RBLY01000005.1 Protein Homology CDS 229018 230019 . + 0 ID=cds-RUP92994.1;Parent=gene-D8M19_07075;Dbxref=NCBI_GP:RUP92994.1;Name=RUP92994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13472.4;locus_tag=D8M19_07075;product=hypothetical protein;protein_id=RUP92994.1;transl_table=11 RBLY01000005.1 Genbank gene 230260 230820 . + . ID=gene-D8M19_07080;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=D8M19_07080 RBLY01000005.1 Protein Homology CDS 230260 230820 . + 0 ID=cds-RUP92995.1;Parent=gene-D8M19_07080;Dbxref=NCBI_GP:RUP92995.1;Name=RUP92995.1;gbkey=CDS;gene=ssb;inference=COORDINATES: protein motif:HMM:TIGR00621;locus_tag=D8M19_07080;product=single-stranded DNA-binding protein;protein_id=RUP92995.1;transl_table=11 RBLY01000005.1 Genbank gene 230939 232609 . + . ID=gene-D8M19_07085;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=D8M19_07085 RBLY01000005.1 Protein Homology CDS 230939 232609 . + 0 ID=cds-RUP92996.1;Parent=gene-D8M19_07085;Dbxref=NCBI_GP:RUP92996.1;Name=RUP92996.1;gbkey=CDS;gene=ettA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120913.1;locus_tag=D8M19_07085;product=energy-dependent translational throttle protein EttA;protein_id=RUP92996.1;transl_table=11 RBLY01000005.1 Genbank gene 232662 233270 . + . ID=gene-D8M19_07090;Name=D8M19_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07090 RBLY01000005.1 Protein Homology CDS 232662 233270 . + 0 ID=cds-RUP92997.1;Parent=gene-D8M19_07090;Dbxref=NCBI_GP:RUP92997.1;Name=RUP92997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582189.1;locus_tag=D8M19_07090;product=acyl-CoA thioesterase;protein_id=RUP92997.1;transl_table=11 RBLY01000005.1 Genbank gene 233270 233971 . + . ID=gene-D8M19_07095;Name=D8M19_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07095 RBLY01000005.1 Protein Homology CDS 233270 233971 . + 0 ID=cds-RUP92998.1;Parent=gene-D8M19_07095;Dbxref=NCBI_GP:RUP92998.1;Name=RUP92998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120915.1;locus_tag=D8M19_07095;product=hypothetical protein;protein_id=RUP92998.1;transl_table=11 RBLY01000005.1 Genbank gene 234168 235229 . + . ID=gene-D8M19_07100;Name=D8M19_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07100 RBLY01000005.1 Protein Homology CDS 234168 235229 . + 0 ID=cds-RUP92999.1;Parent=gene-D8M19_07100;Dbxref=NCBI_GP:RUP92999.1;Name=RUP92999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04235.10;locus_tag=D8M19_07100;product=DUF418 domain-containing protein;protein_id=RUP92999.1;transl_table=11 RBLY01000005.1 Genbank gene 235293 236225 . + . ID=gene-D8M19_07105;Name=D8M19_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07105 RBLY01000005.1 Protein Homology CDS 235293 236225 . + 0 ID=cds-RUP93000.1;Parent=gene-D8M19_07105;Dbxref=NCBI_GP:RUP93000.1;Name=RUP93000.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=D8M19_07105;product=serine protease;protein_id=RUP93000.1;transl_table=11 RBLY01000005.1 Genbank pseudogene 236341 236736 . - . ID=gene-D8M19_07110;Name=D8M19_07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07110;pseudo=true RBLY01000005.1 Protein Homology CDS 236341 236736 . - 0 ID=cds-D8M19_07110;Parent=gene-D8M19_07110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120918.1;locus_tag=D8M19_07110;product=cell filamentation protein Fic;pseudo=true;transl_table=11 RBLY01000005.1 Genbank gene 236736 236984 . - . ID=gene-D8M19_07115;Name=D8M19_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07115 RBLY01000005.1 Protein Homology CDS 236736 236984 . - 0 ID=cds-RUP93001.1;Parent=gene-D8M19_07115;Dbxref=NCBI_GP:RUP93001.1;Name=RUP93001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006680473.1;locus_tag=D8M19_07115;product=hypothetical protein;protein_id=RUP93001.1;transl_table=11 RBLY01000005.1 Genbank gene 237152 238984 . - . ID=gene-D8M19_07120;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=D8M19_07120 RBLY01000005.1 Protein Homology CDS 237152 238984 . - 0 ID=cds-RUP93026.1;Parent=gene-D8M19_07120;Dbxref=NCBI_GP:RUP93026.1;Name=RUP93026.1;gbkey=CDS;gene=thiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528887.1;locus_tag=D8M19_07120;product=phosphomethylpyrimidine synthase ThiC;protein_id=RUP93026.1;transl_table=11 RBLY01000005.1 cmsearch riboswitch 238981 239094 . - . ID=id-RBLY01000005.1:238981..239094;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch RBLY01000005.1 Genbank gene 239335 240423 . + . ID=gene-D8M19_07125;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=D8M19_07125 RBLY01000005.1 Protein Homology CDS 239335 240423 . + 0 ID=cds-RUP93002.1;Parent=gene-D8M19_07125;Dbxref=NCBI_GP:RUP93002.1;Name=RUP93002.1;gbkey=CDS;gene=ald;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324009.1;locus_tag=D8M19_07125;product=alanine dehydrogenase;protein_id=RUP93002.1;transl_table=11 ##sequence-region RBLY01000006.1 1 226353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000006.1 Genbank region 1 226353 . + . ID=RBLY01000006.1:1..226353;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000006.1 Genbank gene 150 1127 . - . ID=gene-D8M19_07130;Name=D8M19_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07130 RBLY01000006.1 Protein Homology CDS 150 1127 . - 0 ID=cds-RUP92593.1;Parent=gene-D8M19_07130;Dbxref=NCBI_GP:RUP92593.1;Name=RUP92593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020098356.1;locus_tag=D8M19_07130;product=aldo/keto reductase;protein_id=RUP92593.1;transl_table=11 RBLY01000006.1 Genbank gene 1397 2287 . + . ID=gene-D8M19_07135;Name=D8M19_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07135 RBLY01000006.1 Protein Homology CDS 1397 2287 . + 0 ID=cds-RUP92440.1;Parent=gene-D8M19_07135;Dbxref=NCBI_GP:RUP92440.1;Name=RUP92440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121352.1;locus_tag=D8M19_07135;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=RUP92440.1;transl_table=11 RBLY01000006.1 Genbank gene 2429 3358 . + . ID=gene-D8M19_07140;Name=D8M19_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07140 RBLY01000006.1 Protein Homology CDS 2429 3358 . + 0 ID=cds-RUP92441.1;Parent=gene-D8M19_07140;Dbxref=NCBI_GP:RUP92441.1;Name=RUP92441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121353.1;locus_tag=D8M19_07140;product=AEC family transporter;protein_id=RUP92441.1;transl_table=11 RBLY01000006.1 Genbank gene 3374 3625 . - . ID=gene-D8M19_07145;Name=D8M19_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07145 RBLY01000006.1 Protein Homology CDS 3374 3625 . - 0 ID=cds-RUP92594.1;Parent=gene-D8M19_07145;Dbxref=NCBI_GP:RUP92594.1;Name=RUP92594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399875.1;locus_tag=D8M19_07145;product=DUF4229 domain-containing protein;protein_id=RUP92594.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 3881 4111 . + . ID=gene-D8M19_07150;Name=D8M19_07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07150;pseudo=true RBLY01000006.1 Protein Homology CDS 3881 4111 . + 0 ID=cds-D8M19_07150;Parent=gene-D8M19_07150;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322966.1;locus_tag=D8M19_07150;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 4491 5483 . - . ID=gene-D8M19_07155;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=D8M19_07155 RBLY01000006.1 Protein Homology CDS 4491 5483 . - 0 ID=cds-RUP92442.1;Parent=gene-D8M19_07155;Dbxref=NCBI_GP:RUP92442.1;Name=RUP92442.1;gbkey=CDS;gene=ccsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121356.1;locus_tag=D8M19_07155;product=c-type cytochrome biogenesis protein CcsB;protein_id=RUP92442.1;transl_table=11 RBLY01000006.1 Genbank gene 5753 7345 . - . ID=gene-D8M19_07160;Name=D8M19_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07160 RBLY01000006.1 Protein Homology CDS 5753 7345 . - 0 ID=cds-RUP92595.1;Parent=gene-D8M19_07160;Dbxref=NCBI_GP:RUP92595.1;Name=RUP92595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121357.1;locus_tag=D8M19_07160;product=cytochrome c biogenesis protein ResB;protein_id=RUP92595.1;transl_table=11 RBLY01000006.1 Genbank gene 7507 8319 . - . ID=gene-D8M19_07165;Name=D8M19_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07165 RBLY01000006.1 Protein Homology CDS 7507 8319 . - 0 ID=cds-RUP92596.1;Parent=gene-D8M19_07165;Dbxref=NCBI_GP:RUP92596.1;Name=RUP92596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327920.1;locus_tag=D8M19_07165;product=cytochrome c biogenesis protein CcdA;protein_id=RUP92596.1;transl_table=11 RBLY01000006.1 Genbank gene 8506 9132 . - . ID=gene-D8M19_07170;Name=D8M19_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07170 RBLY01000006.1 Protein Homology CDS 8506 9132 . - 0 ID=cds-RUP92443.1;Parent=gene-D8M19_07170;Dbxref=NCBI_GP:RUP92443.1;Name=RUP92443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121360.1;locus_tag=D8M19_07170;product=TlpA family protein disulfide reductase;protein_id=RUP92443.1;transl_table=11 RBLY01000006.1 Genbank gene 9220 9822 . - . ID=gene-D8M19_07175;Name=D8M19_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07175 RBLY01000006.1 Protein Homology CDS 9220 9822 . - 0 ID=cds-RUP92597.1;Parent=gene-D8M19_07175;Dbxref=NCBI_GP:RUP92597.1;Name=RUP92597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823545.1;locus_tag=D8M19_07175;product=histidine phosphatase family protein;protein_id=RUP92597.1;transl_table=11 RBLY01000006.1 Genbank gene 10162 11460 . - . ID=gene-D8M19_07180;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=D8M19_07180 RBLY01000006.1 Protein Homology CDS 10162 11460 . - 0 ID=cds-RUP92598.1;Parent=gene-D8M19_07180;Dbxref=NCBI_GP:RUP92598.1;Name=RUP92598.1;gbkey=CDS;gene=hemL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327917.1;locus_tag=D8M19_07180;product=glutamate-1-semialdehyde-2%2C1-aminomutase;protein_id=RUP92598.1;transl_table=11 RBLY01000006.1 Genbank gene 11687 13249 . - . ID=gene-D8M19_07185;Name=D8M19_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07185 RBLY01000006.1 Protein Homology CDS 11687 13249 . - 0 ID=cds-RUP92444.1;Parent=gene-D8M19_07185;Dbxref=NCBI_GP:RUP92444.1;Name=RUP92444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121363.1;locus_tag=D8M19_07185;product=protoporphyrinogen oxidase;protein_id=RUP92444.1;transl_table=11 RBLY01000006.1 Genbank gene 13343 14431 . - . ID=gene-D8M19_07190;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=D8M19_07190 RBLY01000006.1 Protein Homology CDS 13343 14431 . - 0 ID=cds-RUP92445.1;Parent=gene-D8M19_07190;Dbxref=NCBI_GP:RUP92445.1;Name=RUP92445.1;gbkey=CDS;gene=hemE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121364.1;locus_tag=D8M19_07190;product=uroporphyrinogen decarboxylase;protein_id=RUP92445.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 14613 15170 . - . ID=gene-D8M19_07195;Name=D8M19_07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07195;pseudo=true RBLY01000006.1 Protein Homology CDS 14613 15170 . - 0 ID=cds-D8M19_07195;Parent=gene-D8M19_07195;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527612.1;locus_tag=D8M19_07195;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 15415 16404 . - . ID=gene-D8M19_07200;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=D8M19_07200 RBLY01000006.1 Protein Homology CDS 15415 16404 . - 0 ID=cds-RUP92446.1;Parent=gene-D8M19_07200;Dbxref=NCBI_GP:RUP92446.1;Name=RUP92446.1;gbkey=CDS;gene=hemB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121366.1;locus_tag=D8M19_07200;product=porphobilinogen synthase;protein_id=RUP92446.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 16652 18316 . - . ID=gene-D8M19_07205;Name=D8M19_07205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07205;pseudo=true RBLY01000006.1 Protein Homology CDS 16652 18316 . - 0 ID=cds-D8M19_07205;Parent=gene-D8M19_07205;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327224.1;locus_tag=D8M19_07205;product=bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 18596 19489 . - . ID=gene-D8M19_07210;Name=D8M19_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07210 RBLY01000006.1 Protein Homology CDS 18596 19489 . - 0 ID=cds-RUP92447.1;Parent=gene-D8M19_07210;Dbxref=NCBI_GP:RUP92447.1;Name=RUP92447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121368.1;locus_tag=D8M19_07210;product=hydroxymethylbilane synthase;protein_id=RUP92447.1;transl_table=11 RBLY01000006.1 Genbank gene 19561 21027 . - . ID=gene-D8M19_07215;Name=D8M19_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07215 RBLY01000006.1 Protein Homology CDS 19561 21027 . - 0 ID=cds-RUP92448.1;Parent=gene-D8M19_07215;Dbxref=NCBI_GP:RUP92448.1;Name=RUP92448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527604.1;locus_tag=D8M19_07215;product=glutamyl-tRNA reductase;protein_id=RUP92448.1;transl_table=11 RBLY01000006.1 Genbank gene 21287 21511 . - . ID=gene-D8M19_07220;Name=D8M19_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07220 RBLY01000006.1 Protein Homology CDS 21287 21511 . - 0 ID=cds-RUP92599.1;Parent=gene-D8M19_07220;Dbxref=NCBI_GP:RUP92599.1;Name=RUP92599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442018.1;locus_tag=D8M19_07220;product=glutaredoxin family protein;protein_id=RUP92599.1;transl_table=11 RBLY01000006.1 Genbank gene 22010 23077 . + . ID=gene-D8M19_07225;Name=D8M19_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07225 RBLY01000006.1 Protein Homology CDS 22010 23077 . + 0 ID=cds-RUP92600.1;Parent=gene-D8M19_07225;Dbxref=NCBI_GP:RUP92600.1;Name=RUP92600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014522673.1;locus_tag=D8M19_07225;product=HAD-IB family hydrolase;protein_id=RUP92600.1;transl_table=11 RBLY01000006.1 Genbank gene 23295 24926 . + . ID=gene-D8M19_07230;Name=D8M19_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07230 RBLY01000006.1 Protein Homology CDS 23295 24926 . + 0 ID=cds-RUP92449.1;Parent=gene-D8M19_07230;Dbxref=NCBI_GP:RUP92449.1;Name=RUP92449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01844.21;locus_tag=D8M19_07230;product=HNH endonuclease;protein_id=RUP92449.1;transl_table=11 RBLY01000006.1 Genbank gene 25082 25183 . - . ID=gene-D8M19_07235;Name=D8M19_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07235 RBLY01000006.1 Protein Homology CDS 25082 25183 . - 0 ID=cds-RUP92450.1;Parent=gene-D8M19_07235;Dbxref=NCBI_GP:RUP92450.1;Name=RUP92450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003402602.1;locus_tag=D8M19_07235;product=AURKAIP1/COX24 domain-containing protein;protein_id=RUP92450.1;transl_table=11 RBLY01000006.1 Genbank gene 25435 25626 . - . ID=gene-D8M19_07240;Name=D8M19_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07240 RBLY01000006.1 Protein Homology CDS 25435 25626 . - 0 ID=cds-RUP92451.1;Parent=gene-D8M19_07240;Dbxref=NCBI_GP:RUP92451.1;Name=RUP92451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599659.1;locus_tag=D8M19_07240;product=DNA-binding protein;protein_id=RUP92451.1;transl_table=11 RBLY01000006.1 Genbank gene 25980 26786 . - . ID=gene-D8M19_07245;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=D8M19_07245 RBLY01000006.1 Protein Homology CDS 25980 26786 . - 0 ID=cds-RUP92452.1;Parent=gene-D8M19_07245;Dbxref=NCBI_GP:RUP92452.1;Name=RUP92452.1;gbkey=CDS;gene=proC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121374.1;locus_tag=D8M19_07245;product=pyrroline-5-carboxylate reductase;protein_id=RUP92452.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 28119 28400 . - . ID=gene-D8M19_07250;Name=D8M19_07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07250;pseudo=true RBLY01000006.1 Protein Homology CDS 28119 28400 . - 0 ID=cds-D8M19_07250;Parent=gene-D8M19_07250;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014835875.1;locus_tag=D8M19_07250;product=CPBP family intramembrane metalloprotease;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 28412 29341 . - . ID=gene-D8M19_07255;Name=D8M19_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07255 RBLY01000006.1 Protein Homology CDS 28412 29341 . - 0 ID=cds-RUP92453.1;Parent=gene-D8M19_07255;Dbxref=NCBI_GP:RUP92453.1;Name=RUP92453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714802.1;locus_tag=D8M19_07255;product=Ppx/GppA family phosphatase;protein_id=RUP92453.1;transl_table=11 RBLY01000006.1 Genbank gene 29375 30277 . + . ID=gene-D8M19_07260;Name=D8M19_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07260 RBLY01000006.1 Protein Homology CDS 29375 30277 . + 0 ID=cds-RUP92454.1;Parent=gene-D8M19_07260;Dbxref=NCBI_GP:RUP92454.1;Name=RUP92454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189823.1;locus_tag=D8M19_07260;product=hypothetical protein;protein_id=RUP92454.1;transl_table=11 RBLY01000006.1 Genbank gene 30290 30988 . - . ID=gene-D8M19_07265;Name=D8M19_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07265 RBLY01000006.1 Protein Homology CDS 30290 30988 . - 0 ID=cds-RUP92455.1;Parent=gene-D8M19_07265;Dbxref=NCBI_GP:RUP92455.1;Name=RUP92455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189824.1;locus_tag=D8M19_07265;product=DNA-binding response regulator;protein_id=RUP92455.1;transl_table=11 RBLY01000006.1 Genbank gene 31099 32310 . - . ID=gene-D8M19_07270;Name=D8M19_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07270 RBLY01000006.1 Protein Homology CDS 31099 32310 . - 0 ID=cds-RUP92601.1;Parent=gene-D8M19_07270;Dbxref=NCBI_GP:RUP92601.1;Name=RUP92601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014301355.1;locus_tag=D8M19_07270;product=sensor histidine kinase;protein_id=RUP92601.1;transl_table=11 RBLY01000006.1 Genbank gene 32499 33275 . - . ID=gene-D8M19_07275;Name=D8M19_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07275 RBLY01000006.1 Protein Homology CDS 32499 33275 . - 0 ID=cds-RUP92456.1;Parent=gene-D8M19_07275;Dbxref=NCBI_GP:RUP92456.1;Name=RUP92456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121380.1;locus_tag=D8M19_07275;product=phosphoglyceromutase;protein_id=RUP92456.1;transl_table=11 RBLY01000006.1 Genbank gene 33369 34688 . - . ID=gene-D8M19_07280;Name=mshA;gbkey=Gene;gene=mshA;gene_biotype=protein_coding;locus_tag=D8M19_07280 RBLY01000006.1 Protein Homology CDS 33369 34688 . - 0 ID=cds-RUP92457.1;Parent=gene-D8M19_07280;Dbxref=NCBI_GP:RUP92457.1;Name=RUP92457.1;gbkey=CDS;gene=mshA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121381.1;locus_tag=D8M19_07280;product=D-inositol-3-phosphate glycosyltransferase;protein_id=RUP92457.1;transl_table=11 RBLY01000006.1 Genbank gene 34931 36649 . + . ID=gene-D8M19_07285;Name=D8M19_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07285 RBLY01000006.1 Protein Homology CDS 34931 36649 . + 0 ID=cds-RUP92458.1;Parent=gene-D8M19_07285;Dbxref=NCBI_GP:RUP92458.1;Name=RUP92458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121669.1;locus_tag=D8M19_07285;product=long-chain fatty acid--CoA ligase;protein_id=RUP92458.1;transl_table=11 RBLY01000006.1 Genbank gene 36657 36875 . - . ID=gene-D8M19_07290;Name=D8M19_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07290 RBLY01000006.1 GeneMarkS+ CDS 36657 36875 . - 0 ID=cds-RUP92459.1;Parent=gene-D8M19_07290;Dbxref=NCBI_GP:RUP92459.1;Name=RUP92459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07290;product=hypothetical protein;protein_id=RUP92459.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 37212 38918 . + . ID=gene-D8M19_07295;Name=D8M19_07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07295;pseudo=true RBLY01000006.1 Protein Homology CDS 37212 38918 . + 0 ID=cds-D8M19_07295;Parent=gene-D8M19_07295;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014309949.1;locus_tag=D8M19_07295;product=long-chain fatty acid--CoA ligase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 39175 41058 . + . ID=gene-D8M19_07300;Name=D8M19_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07300 RBLY01000006.1 Protein Homology CDS 39175 41058 . + 0 ID=cds-RUP92460.1;Parent=gene-D8M19_07300;Dbxref=NCBI_GP:RUP92460.1;Name=RUP92460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121160.1;locus_tag=D8M19_07300;product=long-chain fatty acid--CoA ligase;protein_id=RUP92460.1;transl_table=11 RBLY01000006.1 Genbank gene 41300 50614 . + . ID=gene-D8M19_07305;Name=D8M19_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07305 RBLY01000006.1 Protein Homology CDS 41300 50614 . + 0 ID=cds-RUP92461.1;Parent=gene-D8M19_07305;Dbxref=NCBI_GP:RUP92461.1;Name=RUP92461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121152.1;locus_tag=D8M19_07305;product=DUF1729 domain-containing protein;protein_id=RUP92461.1;transl_table=11 RBLY01000006.1 Genbank gene 50833 51798 . + . ID=gene-D8M19_07310;Name=D8M19_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07310 RBLY01000006.1 Protein Homology CDS 50833 51798 . + 0 ID=cds-RUP92462.1;Parent=gene-D8M19_07310;Dbxref=NCBI_GP:RUP92462.1;Name=RUP92462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01522.19;locus_tag=D8M19_07310;product=polysaccharide deacetylase family protein;protein_id=RUP92462.1;transl_table=11 RBLY01000006.1 Genbank gene 51801 52256 . - . ID=gene-D8M19_07315;Name=D8M19_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07315 RBLY01000006.1 GeneMarkS+ CDS 51801 52256 . - 0 ID=cds-RUP92463.1;Parent=gene-D8M19_07315;Dbxref=NCBI_GP:RUP92463.1;Name=RUP92463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07315;product=hypothetical protein;protein_id=RUP92463.1;transl_table=11 RBLY01000006.1 Genbank gene 52438 53676 . + . ID=gene-D8M19_07320;Name=D8M19_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07320 RBLY01000006.1 Protein Homology CDS 52438 53676 . + 0 ID=cds-RUP92464.1;Parent=gene-D8M19_07320;Dbxref=NCBI_GP:RUP92464.1;Name=RUP92464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121149.1;locus_tag=D8M19_07320;product=esterase family protein;protein_id=RUP92464.1;transl_table=11 RBLY01000006.1 Genbank gene 53722 54237 . + . ID=gene-D8M19_07325;Name=D8M19_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07325 RBLY01000006.1 Protein Homology CDS 53722 54237 . + 0 ID=cds-RUP92465.1;Parent=gene-D8M19_07325;Dbxref=NCBI_GP:RUP92465.1;Name=RUP92465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121148.1;locus_tag=D8M19_07325;product=hypothetical protein;protein_id=RUP92465.1;transl_table=11 RBLY01000006.1 Genbank gene 54272 55507 . - . ID=gene-D8M19_07330;Name=D8M19_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07330 RBLY01000006.1 Protein Homology CDS 54272 55507 . - 0 ID=cds-RUP92466.1;Parent=gene-D8M19_07330;Dbxref=NCBI_GP:RUP92466.1;Name=RUP92466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327203.1;locus_tag=D8M19_07330;product=UDP-N-acetylmuramate dehydrogenase;protein_id=RUP92466.1;transl_table=11 RBLY01000006.1 Genbank gene 55531 56022 . + . ID=gene-D8M19_07335;Name=D8M19_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07335 RBLY01000006.1 Protein Homology CDS 55531 56022 . + 0 ID=cds-RUP92467.1;Parent=gene-D8M19_07335;Dbxref=NCBI_GP:RUP92467.1;Name=RUP92467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910704.1;locus_tag=D8M19_07335;product=DUF2505 domain-containing protein;protein_id=RUP92467.1;transl_table=11 RBLY01000006.1 Genbank gene 56052 56942 . + . ID=gene-D8M19_07340;Name=D8M19_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07340 RBLY01000006.1 Protein Homology CDS 56052 56942 . + 0 ID=cds-RUP92468.1;Parent=gene-D8M19_07340;Dbxref=NCBI_GP:RUP92468.1;Name=RUP92468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11209.6;locus_tag=D8M19_07340;product=DUF2993 domain-containing protein;protein_id=RUP92468.1;transl_table=11 RBLY01000006.1 Genbank gene 56974 57849 . - . ID=gene-D8M19_07345;Name=D8M19_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07345 RBLY01000006.1 GeneMarkS+ CDS 56974 57849 . - 0 ID=cds-RUP92469.1;Parent=gene-D8M19_07345;Dbxref=NCBI_GP:RUP92469.1;Name=RUP92469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07345;product=hypothetical protein;protein_id=RUP92469.1;transl_table=11 RBLY01000006.1 Genbank gene 57896 58285 . - . ID=gene-D8M19_07350;Name=D8M19_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07350 RBLY01000006.1 Protein Homology CDS 57896 58285 . - 0 ID=cds-RUP92470.1;Parent=gene-D8M19_07350;Dbxref=NCBI_GP:RUP92470.1;Name=RUP92470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859726.1;locus_tag=D8M19_07350;product=DUF2516 family protein;protein_id=RUP92470.1;transl_table=11 RBLY01000006.1 Genbank gene 58399 58836 . - . ID=gene-D8M19_07355;Name=D8M19_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07355 RBLY01000006.1 GeneMarkS+ CDS 58399 58836 . - 0 ID=cds-RUP92471.1;Parent=gene-D8M19_07355;Dbxref=NCBI_GP:RUP92471.1;Name=RUP92471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07355;product=hypothetical protein;protein_id=RUP92471.1;transl_table=11 RBLY01000006.1 Genbank gene 58929 60143 . - . ID=gene-D8M19_07360;Name=D8M19_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07360 RBLY01000006.1 Protein Homology CDS 58929 60143 . - 0 ID=cds-RUP92602.1;Parent=gene-D8M19_07360;Dbxref=NCBI_GP:RUP92602.1;Name=RUP92602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021404.1;locus_tag=D8M19_07360;product=DUF445 family protein;protein_id=RUP92602.1;transl_table=11 RBLY01000006.1 Genbank gene 60438 60806 . - . ID=gene-D8M19_07365;Name=D8M19_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07365 RBLY01000006.1 Protein Homology CDS 60438 60806 . - 0 ID=cds-RUP92472.1;Parent=gene-D8M19_07365;Dbxref=NCBI_GP:RUP92472.1;Name=RUP92472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189861.1;locus_tag=D8M19_07365;product=hypothetical protein;protein_id=RUP92472.1;transl_table=11 RBLY01000006.1 Genbank gene 60945 61694 . - . ID=gene-D8M19_07370;Name=D8M19_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07370 RBLY01000006.1 Protein Homology CDS 60945 61694 . - 0 ID=cds-RUP92473.1;Parent=gene-D8M19_07370;Dbxref=NCBI_GP:RUP92473.1;Name=RUP92473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599620.1;locus_tag=D8M19_07370;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=RUP92473.1;transl_table=11 RBLY01000006.1 Genbank gene 61694 63703 . - . ID=gene-D8M19_07375;Name=D8M19_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07375 RBLY01000006.1 Protein Homology CDS 61694 63703 . - 0 ID=cds-RUP92474.1;Parent=gene-D8M19_07375;Dbxref=NCBI_GP:RUP92474.1;Name=RUP92474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323075.1;locus_tag=D8M19_07375;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=RUP92474.1;transl_table=11 RBLY01000006.1 Genbank gene 63770 64525 . - . ID=gene-D8M19_07380;Name=D8M19_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07380 RBLY01000006.1 Protein Homology CDS 63770 64525 . - 0 ID=cds-RUP92475.1;Parent=gene-D8M19_07380;Dbxref=NCBI_GP:RUP92475.1;Name=RUP92475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121137.1;locus_tag=D8M19_07380;product=succinate dehydrogenase;protein_id=RUP92475.1;transl_table=11 RBLY01000006.1 Genbank gene 64879 66294 . - . ID=gene-D8M19_07385;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=D8M19_07385 RBLY01000006.1 Protein Homology CDS 64879 66294 . - 0 ID=cds-RUP92603.1;Parent=gene-D8M19_07385;Dbxref=NCBI_GP:RUP92603.1;Name=RUP92603.1;gbkey=CDS;gene=lpdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846183.1;locus_tag=D8M19_07385;product=dihydrolipoyl dehydrogenase;protein_id=RUP92603.1;transl_table=11 RBLY01000006.1 Genbank gene 67115 68239 . + . ID=gene-D8M19_07390;Name=D8M19_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07390 RBLY01000006.1 Protein Homology CDS 67115 68239 . + 0 ID=cds-RUP92476.1;Parent=gene-D8M19_07390;Dbxref=NCBI_GP:RUP92476.1;Name=RUP92476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121134.1;locus_tag=D8M19_07390;product=esterase family protein;protein_id=RUP92476.1;transl_table=11 RBLY01000006.1 Genbank gene 68464 69459 . + . ID=gene-D8M19_07395;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=D8M19_07395 RBLY01000006.1 Protein Homology CDS 68464 69459 . + 0 ID=cds-RUP92477.1;Parent=gene-D8M19_07395;Dbxref=NCBI_GP:RUP92477.1;Name=RUP92477.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189882.1;locus_tag=D8M19_07395;product=dTDP-glucose 4%2C6-dehydratase;protein_id=RUP92477.1;transl_table=11 RBLY01000006.1 Genbank gene 69475 70839 . + . ID=gene-D8M19_07400;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=D8M19_07400 RBLY01000006.1 Protein Homology CDS 69475 70839 . + 0 ID=cds-RUP92478.1;Parent=gene-D8M19_07400;Dbxref=NCBI_GP:RUP92478.1;Name=RUP92478.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014318599.1;locus_tag=D8M19_07400;product=dTDP-4-dehydrorhamnose reductase;protein_id=RUP92478.1;transl_table=11 RBLY01000006.1 Genbank gene 70846 71712 . + . ID=gene-D8M19_07405;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=D8M19_07405 RBLY01000006.1 Protein Homology CDS 70846 71712 . + 0 ID=cds-RUP92479.1;Parent=gene-D8M19_07405;Dbxref=NCBI_GP:RUP92479.1;Name=RUP92479.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121131.1;locus_tag=D8M19_07405;product=glucose-1-phosphate thymidylyltransferase;protein_id=RUP92479.1;transl_table=11 RBLY01000006.1 Genbank gene 71764 72705 . + . ID=gene-D8M19_07410;Name=D8M19_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07410 RBLY01000006.1 Protein Homology CDS 71764 72705 . + 0 ID=cds-RUP92480.1;Parent=gene-D8M19_07410;Dbxref=NCBI_GP:RUP92480.1;Name=RUP92480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005394704.1;locus_tag=D8M19_07410;product=disulfide bond formation protein DsbA;protein_id=RUP92480.1;transl_table=11 RBLY01000006.1 Genbank gene 72723 73583 . + . ID=gene-D8M19_07415;Name=D8M19_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07415 RBLY01000006.1 Protein Homology CDS 72723 73583 . + 0 ID=cds-RUP92481.1;Parent=gene-D8M19_07415;Dbxref=NCBI_GP:RUP92481.1;Name=RUP92481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121129.1;locus_tag=D8M19_07415;product=cytochrome c biogenesis protein CcdA;protein_id=RUP92481.1;transl_table=11 RBLY01000006.1 Genbank gene 73696 74313 . - . ID=gene-D8M19_07420;Name=D8M19_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07420 RBLY01000006.1 Protein Homology CDS 73696 74313 . - 0 ID=cds-RUP92482.1;Parent=gene-D8M19_07420;Dbxref=NCBI_GP:RUP92482.1;Name=RUP92482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189892.1;locus_tag=D8M19_07420;product=MBL fold metallo-hydrolase;protein_id=RUP92482.1;transl_table=11 RBLY01000006.1 Genbank gene 74319 75449 . - . ID=gene-D8M19_07425;Name=D8M19_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07425 RBLY01000006.1 Protein Homology CDS 74319 75449 . - 0 ID=cds-RUP92604.1;Parent=gene-D8M19_07425;Dbxref=NCBI_GP:RUP92604.1;Name=RUP92604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005323088.1;locus_tag=D8M19_07425;product=S-(hydroxymethyl)mycothiol dehydrogenase;protein_id=RUP92604.1;transl_table=11 RBLY01000006.1 Genbank gene 75735 77378 . + . ID=gene-D8M19_07430;Name=D8M19_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07430 RBLY01000006.1 Protein Homology CDS 75735 77378 . + 0 ID=cds-RUP92483.1;Parent=gene-D8M19_07430;Dbxref=NCBI_GP:RUP92483.1;Name=RUP92483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121126.1;locus_tag=D8M19_07430;product=acyl-CoA synthetase;protein_id=RUP92483.1;transl_table=11 RBLY01000006.1 Genbank gene 77886 79094 . + . ID=gene-D8M19_07435;Name=D8M19_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07435 RBLY01000006.1 Protein Homology CDS 77886 79094 . + 0 ID=cds-RUP92484.1;Parent=gene-D8M19_07435;Dbxref=NCBI_GP:RUP92484.1;Name=RUP92484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13749.4;locus_tag=D8M19_07435;product=ATPase;protein_id=RUP92484.1;transl_table=11 RBLY01000006.1 Genbank gene 79302 79377 . - . ID=gene-D8M19_07440;Name=D8M19_07440;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_07440 RBLY01000006.1 tRNAscan-SE tRNA 79302 79377 . - . ID=rna-D8M19_07440;Parent=gene-D8M19_07440;anticodon=(pos:complement(79342..79344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07440;product=tRNA-Thr RBLY01000006.1 tRNAscan-SE exon 79302 79377 . - . ID=exon-D8M19_07440-1;Parent=rna-D8M19_07440;anticodon=(pos:complement(79342..79344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07440;product=tRNA-Thr RBLY01000006.1 Genbank gene 79519 80802 . - . ID=gene-D8M19_07445;Name=D8M19_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07445 RBLY01000006.1 Protein Homology CDS 79519 80802 . - 0 ID=cds-RUP92605.1;Parent=gene-D8M19_07445;Dbxref=NCBI_GP:RUP92605.1;Name=RUP92605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119173.1;locus_tag=D8M19_07445;product=DNA polymerase III subunit delta';protein_id=RUP92605.1;transl_table=11 RBLY01000006.1 Genbank gene 80948 82474 . + . ID=gene-D8M19_07450;Name=D8M19_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07450 RBLY01000006.1 Protein Homology CDS 80948 82474 . + 0 ID=cds-RUP92485.1;Parent=gene-D8M19_07450;Dbxref=NCBI_GP:RUP92485.1;Name=RUP92485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846159.1;locus_tag=D8M19_07450;product=adenylate/guanylate cyclase domain-containing protein;protein_id=RUP92485.1;transl_table=11 RBLY01000006.1 Genbank gene 82575 83924 . + . ID=gene-D8M19_07455;Name=D8M19_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07455 RBLY01000006.1 Protein Homology CDS 82575 83924 . + 0 ID=cds-RUP92486.1;Parent=gene-D8M19_07455;Dbxref=NCBI_GP:RUP92486.1;Name=RUP92486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04235.10;locus_tag=D8M19_07455;product=DUF418 domain-containing protein;protein_id=RUP92486.1;transl_table=11 RBLY01000006.1 Genbank gene 83928 86942 . - . ID=gene-D8M19_07460;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=D8M19_07460 RBLY01000006.1 Protein Homology CDS 83928 86942 . - 0 ID=cds-RUP92487.1;Parent=gene-D8M19_07460;Dbxref=NCBI_GP:RUP92487.1;Name=RUP92487.1;gbkey=CDS;gene=topA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121110.1;locus_tag=D8M19_07460;product=type I DNA topoisomerase;protein_id=RUP92487.1;transl_table=11 RBLY01000006.1 Genbank gene 87169 87372 . - . ID=gene-D8M19_07465;Name=D8M19_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07465 RBLY01000006.1 Protein Homology CDS 87169 87372 . - 0 ID=cds-RUP92488.1;Parent=gene-D8M19_07465;Dbxref=NCBI_GP:RUP92488.1;Name=RUP92488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010266781.1;locus_tag=D8M19_07465;product=cold-shock protein;protein_id=RUP92488.1;transl_table=11 RBLY01000006.1 Genbank gene 87559 89943 . + . ID=gene-D8M19_07470;Name=D8M19_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07470 RBLY01000006.1 Protein Homology CDS 87559 89943 . + 0 ID=cds-RUP92489.1;Parent=gene-D8M19_07470;Dbxref=NCBI_GP:RUP92489.1;Name=RUP92489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121108.1;locus_tag=D8M19_07470;product=DUF1998 domain-containing protein;protein_id=RUP92489.1;transl_table=11 RBLY01000006.1 Genbank gene 89977 90345 . - . ID=gene-D8M19_07475;Name=D8M19_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07475 RBLY01000006.1 Protein Homology CDS 89977 90345 . - 0 ID=cds-RUP92606.1;Parent=gene-D8M19_07475;Dbxref=NCBI_GP:RUP92606.1;Name=RUP92606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189922.1;locus_tag=D8M19_07475;product=TadE-like protein;protein_id=RUP92606.1;transl_table=11 RBLY01000006.1 Genbank gene 90348 90692 . - . ID=gene-D8M19_07480;Name=D8M19_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07480 RBLY01000006.1 Protein Homology CDS 90348 90692 . - 0 ID=cds-RUP92607.1;Parent=gene-D8M19_07480;Dbxref=NCBI_GP:RUP92607.1;Name=RUP92607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399782.1;locus_tag=D8M19_07480;product=hypothetical protein;protein_id=RUP92607.1;transl_table=11 RBLY01000006.1 Genbank gene 90679 90840 . - . ID=gene-D8M19_07485;Name=D8M19_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07485 RBLY01000006.1 Protein Homology CDS 90679 90840 . - 0 ID=cds-RUP92608.1;Parent=gene-D8M19_07485;Dbxref=NCBI_GP:RUP92608.1;Name=RUP92608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189925.1;locus_tag=D8M19_07485;product=DUF4244 domain-containing protein;protein_id=RUP92608.1;transl_table=11 RBLY01000006.1 Genbank gene 91038 91622 . - . ID=gene-D8M19_07490;Name=D8M19_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07490 RBLY01000006.1 Protein Homology CDS 91038 91622 . - 0 ID=cds-RUP92490.1;Parent=gene-D8M19_07490;Dbxref=NCBI_GP:RUP92490.1;Name=RUP92490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005531240.1;locus_tag=D8M19_07490;product=type II secretion system F family protein;protein_id=RUP92490.1;transl_table=11 RBLY01000006.1 Genbank gene 91619 92419 . - . ID=gene-D8M19_07495;Name=D8M19_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07495 RBLY01000006.1 Protein Homology CDS 91619 92419 . - 0 ID=cds-RUP92491.1;Parent=gene-D8M19_07495;Dbxref=NCBI_GP:RUP92491.1;Name=RUP92491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00482.21;locus_tag=D8M19_07495;product=type II secretion protein F;protein_id=RUP92491.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 92551 93645 . - . ID=gene-D8M19_07500;Name=D8M19_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07500;pseudo=true RBLY01000006.1 Protein Homology CDS 92551 93645 . - 0 ID=cds-D8M19_07500;Parent=gene-D8M19_07500;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121102.1;locus_tag=D8M19_07500;product=TadA family conjugal transfer-associated ATPase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 93743 94957 . - . ID=gene-D8M19_07505;Name=D8M19_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07505 RBLY01000006.1 GeneMarkS+ CDS 93743 94957 . - 0 ID=cds-RUP92492.1;Parent=gene-D8M19_07505;Dbxref=NCBI_GP:RUP92492.1;Name=RUP92492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07505;product=hypothetical protein;protein_id=RUP92492.1;transl_table=11 RBLY01000006.1 Genbank gene 95228 96211 . + . ID=gene-D8M19_07510;Name=D8M19_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07510 RBLY01000006.1 Protein Homology CDS 95228 96211 . + 0 ID=cds-RUP92493.1;Parent=gene-D8M19_07510;Dbxref=NCBI_GP:RUP92493.1;Name=RUP92493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121100.1;locus_tag=D8M19_07510;product=HAD family hydrolase;protein_id=RUP92493.1;transl_table=11 RBLY01000006.1 Genbank gene 96208 96711 . + . ID=gene-D8M19_07515;Name=D8M19_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07515 RBLY01000006.1 Protein Homology CDS 96208 96711 . + 0 ID=cds-RUP92494.1;Parent=gene-D8M19_07515;Dbxref=NCBI_GP:RUP92494.1;Name=RUP92494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121099.1;locus_tag=D8M19_07515;product=phage holin family protein;protein_id=RUP92494.1;transl_table=11 RBLY01000006.1 Genbank gene 96772 97737 . + . ID=gene-D8M19_07520;Name=D8M19_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07520 RBLY01000006.1 Protein Homology CDS 96772 97737 . + 0 ID=cds-RUP92495.1;Parent=gene-D8M19_07520;Dbxref=NCBI_GP:RUP92495.1;Name=RUP92495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12697.5;locus_tag=D8M19_07520;product=alpha/beta hydrolase;protein_id=RUP92495.1;transl_table=11 RBLY01000006.1 Genbank gene 97776 98972 . - . ID=gene-D8M19_07525;Name=D8M19_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07525 RBLY01000006.1 Protein Homology CDS 97776 98972 . - 0 ID=cds-RUP92496.1;Parent=gene-D8M19_07525;Dbxref=NCBI_GP:RUP92496.1;Name=RUP92496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121097.1;locus_tag=D8M19_07525;product=serine protease;protein_id=RUP92496.1;transl_table=11 RBLY01000006.1 Genbank gene 99008 99757 . - . ID=gene-D8M19_07530;Name=D8M19_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07530 RBLY01000006.1 Protein Homology CDS 99008 99757 . - 0 ID=cds-RUP92497.1;Parent=gene-D8M19_07530;Dbxref=NCBI_GP:RUP92497.1;Name=RUP92497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121096.1;locus_tag=D8M19_07530;product=CoA pyrophosphatase;protein_id=RUP92497.1;transl_table=11 RBLY01000006.1 Genbank gene 99757 100284 . - . ID=gene-D8M19_07535;Name=D8M19_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07535 RBLY01000006.1 Protein Homology CDS 99757 100284 . - 0 ID=cds-RUP92609.1;Parent=gene-D8M19_07535;Dbxref=NCBI_GP:RUP92609.1;Name=RUP92609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327122.1;locus_tag=D8M19_07535;product=TlpA family protein disulfide reductase;protein_id=RUP92609.1;transl_table=11 RBLY01000006.1 Genbank gene 100799 101482 . + . ID=gene-D8M19_07540;Name=D8M19_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07540 RBLY01000006.1 Protein Homology CDS 100799 101482 . + 0 ID=cds-RUP92498.1;Parent=gene-D8M19_07540;Dbxref=NCBI_GP:RUP92498.1;Name=RUP92498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770229.1;locus_tag=D8M19_07540;product=Crp/Fnr family transcriptional regulator;protein_id=RUP92498.1;transl_table=11 RBLY01000006.1 Genbank gene 101667 102494 . - . ID=gene-D8M19_07545;Name=D8M19_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07545 RBLY01000006.1 Protein Homology CDS 101667 102494 . - 0 ID=cds-RUP92499.1;Parent=gene-D8M19_07545;Dbxref=NCBI_GP:RUP92499.1;Name=RUP92499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297936.1;locus_tag=D8M19_07545;product=MBL fold metallo-hydrolase;protein_id=RUP92499.1;transl_table=11 RBLY01000006.1 Genbank gene 102572 103027 . - . ID=gene-D8M19_07550;Name=D8M19_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07550 RBLY01000006.1 Protein Homology CDS 102572 103027 . - 0 ID=cds-RUP92610.1;Parent=gene-D8M19_07550;Dbxref=NCBI_GP:RUP92610.1;Name=RUP92610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327119.1;locus_tag=D8M19_07550;product=RidA family protein;protein_id=RUP92610.1;transl_table=11 RBLY01000006.1 Genbank gene 103044 103208 . - . ID=gene-D8M19_07555;Name=D8M19_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07555 RBLY01000006.1 Protein Homology CDS 103044 103208 . - 0 ID=cds-RUP92500.1;Parent=gene-D8M19_07555;Dbxref=NCBI_GP:RUP92500.1;Name=RUP92500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005276492.1;locus_tag=D8M19_07555;product=DUF4177 domain-containing protein;protein_id=RUP92500.1;transl_table=11 RBLY01000006.1 Genbank gene 103275 103556 . - . ID=gene-D8M19_07560;Name=D8M19_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07560 RBLY01000006.1 Protein Homology CDS 103275 103556 . - 0 ID=cds-RUP92611.1;Parent=gene-D8M19_07560;Dbxref=NCBI_GP:RUP92611.1;Name=RUP92611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189966.1;locus_tag=D8M19_07560;product=WhiB family transcriptional regulator;protein_id=RUP92611.1;transl_table=11 RBLY01000006.1 Genbank gene 103800 106190 . + . ID=gene-D8M19_07565;Name=D8M19_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07565 RBLY01000006.1 Protein Homology CDS 103800 106190 . + 0 ID=cds-RUP92612.1;Parent=gene-D8M19_07565;Dbxref=NCBI_GP:RUP92612.1;Name=RUP92612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189968.1;locus_tag=D8M19_07565;product=penicillin-binding protein;protein_id=RUP92612.1;transl_table=11 RBLY01000006.1 Genbank gene 106187 106693 . - . ID=gene-D8M19_07570;Name=D8M19_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07570 RBLY01000006.1 Protein Homology CDS 106187 106693 . - 0 ID=cds-RUP92501.1;Parent=gene-D8M19_07570;Dbxref=NCBI_GP:RUP92501.1;Name=RUP92501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121087.1;locus_tag=D8M19_07570;product=GatB/YqeY domain-containing protein;protein_id=RUP92501.1;transl_table=11 RBLY01000006.1 Genbank gene 106803 107705 . + . ID=gene-D8M19_07575;Name=D8M19_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07575 RBLY01000006.1 Protein Homology CDS 106803 107705 . + 0 ID=cds-RUP92502.1;Parent=gene-D8M19_07575;Dbxref=NCBI_GP:RUP92502.1;Name=RUP92502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118285.1;locus_tag=D8M19_07575;product=metallophosphoesterase;protein_id=RUP92502.1;transl_table=11 RBLY01000006.1 Genbank gene 107828 107904 . + . ID=gene-D8M19_07580;Name=D8M19_07580;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_07580 RBLY01000006.1 tRNAscan-SE tRNA 107828 107904 . + . ID=rna-D8M19_07580;Parent=gene-D8M19_07580;anticodon=(pos:107862..107864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07580;product=tRNA-Pro RBLY01000006.1 tRNAscan-SE exon 107828 107904 . + . ID=exon-D8M19_07580-1;Parent=rna-D8M19_07580;anticodon=(pos:107862..107864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_07580;product=tRNA-Pro RBLY01000006.1 Genbank gene 108228 109586 . - . ID=gene-D8M19_07585;Name=D8M19_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07585 RBLY01000006.1 GeneMarkS+ CDS 108228 109586 . - 0 ID=cds-RUP92503.1;Parent=gene-D8M19_07585;Dbxref=NCBI_GP:RUP92503.1;Name=RUP92503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07585;product=collagen-like protein;protein_id=RUP92503.1;transl_table=11 RBLY01000006.1 Genbank gene 109814 110104 . + . ID=gene-D8M19_07590;Name=D8M19_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07590 RBLY01000006.1 Protein Homology CDS 109814 110104 . + 0 ID=cds-RUP92504.1;Parent=gene-D8M19_07590;Dbxref=NCBI_GP:RUP92504.1;Name=RUP92504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121084.1;locus_tag=D8M19_07590;product=peptidase M23;protein_id=RUP92504.1;transl_table=11 RBLY01000006.1 Genbank gene 110185 111717 . - . ID=gene-D8M19_07595;Name=D8M19_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07595 RBLY01000006.1 Protein Homology CDS 110185 111717 . - 0 ID=cds-RUP92505.1;Parent=gene-D8M19_07595;Dbxref=NCBI_GP:RUP92505.1;Name=RUP92505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03057;locus_tag=D8M19_07595;product=hypothetical protein;protein_id=RUP92505.1;transl_table=11 RBLY01000006.1 Genbank gene 111937 113484 . - . ID=gene-D8M19_07600;Name=D8M19_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07600 RBLY01000006.1 Protein Homology CDS 111937 113484 . - 0 ID=cds-RUP92506.1;Parent=gene-D8M19_07600;Dbxref=NCBI_GP:RUP92506.1;Name=RUP92506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121082.1;locus_tag=D8M19_07600;product=catalase;protein_id=RUP92506.1;transl_table=11 RBLY01000006.1 Genbank gene 113636 114184 . + . ID=gene-D8M19_07605;Name=D8M19_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07605 RBLY01000006.1 Protein Homology CDS 113636 114184 . + 0 ID=cds-RUP92507.1;Parent=gene-D8M19_07605;Dbxref=NCBI_GP:RUP92507.1;Name=RUP92507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121081.1;locus_tag=D8M19_07605;product=RNA polymerase sigma factor;protein_id=RUP92507.1;transl_table=11 RBLY01000006.1 Genbank gene 114273 115580 . + . ID=gene-D8M19_07610;Name=D8M19_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07610 RBLY01000006.1 Protein Homology CDS 114273 115580 . + 0 ID=cds-RUP92508.1;Parent=gene-D8M19_07610;Dbxref=NCBI_GP:RUP92508.1;Name=RUP92508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121080.1;locus_tag=D8M19_07610;product=hypothetical protein;protein_id=RUP92508.1;transl_table=11 RBLY01000006.1 Genbank gene 115687 116724 . - . ID=gene-D8M19_07615;Name=D8M19_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07615 RBLY01000006.1 Protein Homology CDS 115687 116724 . - 0 ID=cds-RUP92509.1;Parent=gene-D8M19_07615;Dbxref=NCBI_GP:RUP92509.1;Name=RUP92509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297959.1;locus_tag=D8M19_07615;product=aspartate-semialdehyde dehydrogenase;protein_id=RUP92509.1;transl_table=11 RBLY01000006.1 Genbank gene 116769 118034 . - . ID=gene-D8M19_07620;Name=D8M19_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07620 RBLY01000006.1 Protein Homology CDS 116769 118034 . - 0 ID=cds-RUP92510.1;Parent=gene-D8M19_07620;Dbxref=NCBI_GP:RUP92510.1;Name=RUP92510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121078.1;locus_tag=D8M19_07620;product=aspartate kinase;protein_id=RUP92510.1;transl_table=11 RBLY01000006.1 Genbank gene 118384 120207 . + . ID=gene-D8M19_07625;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=D8M19_07625 RBLY01000006.1 Protein Homology CDS 118384 120207 . + 0 ID=cds-RUP92511.1;Parent=gene-D8M19_07625;Dbxref=NCBI_GP:RUP92511.1;Name=RUP92511.1;gbkey=CDS;gene=leuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121076.1;locus_tag=D8M19_07625;product=2-isopropylmalate synthase;protein_id=RUP92511.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 120411 121445 . + . ID=gene-D8M19_07630;Name=D8M19_07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07630;pseudo=true RBLY01000006.1 Protein Homology CDS 120411 121445 . + 0 ID=cds-D8M19_07630;Parent=gene-D8M19_07630;Note=3'-5' exonuclease of DNA polymerase III%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013241017.1;locus_tag=D8M19_07630;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 121902 123245 . + . ID=gene-D8M19_07635;Name=D8M19_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07635 RBLY01000006.1 Protein Homology CDS 121902 123245 . + 0 ID=cds-RUP92613.1;Parent=gene-D8M19_07635;Dbxref=NCBI_GP:RUP92613.1;Name=RUP92613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018023112.1;locus_tag=D8M19_07635;product=Mur ligase family protein;protein_id=RUP92613.1;transl_table=11 RBLY01000006.1 Genbank gene 123261 124097 . + . ID=gene-D8M19_07640;Name=D8M19_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07640 RBLY01000006.1 Protein Homology CDS 123261 124097 . + 0 ID=cds-RUP92614.1;Parent=gene-D8M19_07640;Dbxref=NCBI_GP:RUP92614.1;Name=RUP92614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121072.1;locus_tag=D8M19_07640;product=glutamine amidotransferase;protein_id=RUP92614.1;transl_table=11 RBLY01000006.1 Genbank gene 124147 125064 . + . ID=gene-D8M19_07645;Name=D8M19_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07645 RBLY01000006.1 Protein Homology CDS 124147 125064 . + 0 ID=cds-RUP92512.1;Parent=gene-D8M19_07645;Dbxref=NCBI_GP:RUP92512.1;Name=RUP92512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08021.9;locus_tag=D8M19_07645;product=siderophore-interacting protein;protein_id=RUP92512.1;transl_table=11 RBLY01000006.1 Genbank gene 125121 125780 . - . ID=gene-D8M19_07650;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=D8M19_07650 RBLY01000006.1 Protein Homology CDS 125121 125780 . - 0 ID=cds-RUP92513.1;Parent=gene-D8M19_07650;Dbxref=NCBI_GP:RUP92513.1;Name=RUP92513.1;gbkey=CDS;gene=recR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121070.1;locus_tag=D8M19_07650;product=recombination protein RecR;protein_id=RUP92513.1;transl_table=11 RBLY01000006.1 Genbank gene 125781 126119 . - . ID=gene-D8M19_07655;Name=D8M19_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07655 RBLY01000006.1 Protein Homology CDS 125781 126119 . - 0 ID=cds-RUP92514.1;Parent=gene-D8M19_07655;Dbxref=NCBI_GP:RUP92514.1;Name=RUP92514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121069.1;locus_tag=D8M19_07655;product=YbaB/EbfC family nucleoid-associated protein;protein_id=RUP92514.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 126221 126259 . - . ID=gene-D8M19_07660;Name=D8M19_07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07660;pseudo=true RBLY01000006.1 Protein Homology CDS 126221 126259 . - 0 ID=cds-D8M19_07660;Parent=gene-D8M19_07660;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01053;locus_tag=D8M19_07660;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 126246 128969 . - . ID=gene-D8M19_07665;Name=D8M19_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07665 RBLY01000006.1 Protein Homology CDS 126246 128969 . - 0 ID=cds-RUP92515.1;Parent=gene-D8M19_07665;Dbxref=NCBI_GP:RUP92515.1;Name=RUP92515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012714764.1;locus_tag=D8M19_07665;product=DNA polymerase III subunit gamma and tau;protein_id=RUP92515.1;transl_table=11 RBLY01000006.1 Genbank gene 129048 129626 . - . ID=gene-D8M19_07670;Name=D8M19_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07670 RBLY01000006.1 Protein Homology CDS 129048 129626 . - 0 ID=cds-RUP92516.1;Parent=gene-D8M19_07670;Dbxref=NCBI_GP:RUP92516.1;Name=RUP92516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121067.1;locus_tag=D8M19_07670;product=hypothetical protein;protein_id=RUP92516.1;transl_table=11 RBLY01000006.1 Genbank gene 129607 130875 . - . ID=gene-D8M19_07675;Name=D8M19_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07675 RBLY01000006.1 Protein Homology CDS 129607 130875 . - 0 ID=cds-RUP92517.1;Parent=gene-D8M19_07675;Dbxref=NCBI_GP:RUP92517.1;Name=RUP92517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121066.1;locus_tag=D8M19_07675;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=RUP92517.1;transl_table=11 RBLY01000006.1 Genbank gene 131027 131776 . - . ID=gene-D8M19_07680;Name=D8M19_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07680 RBLY01000006.1 Protein Homology CDS 131027 131776 . - 0 ID=cds-RUP92615.1;Parent=gene-D8M19_07680;Dbxref=NCBI_GP:RUP92615.1;Name=RUP92615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296735.1;locus_tag=D8M19_07680;product=ABC transporter ATP-binding protein;protein_id=RUP92615.1;transl_table=11 RBLY01000006.1 Genbank gene 131844 132737 . - . ID=gene-D8M19_07685;Name=D8M19_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07685 RBLY01000006.1 Protein Homology CDS 131844 132737 . - 0 ID=cds-RUP92518.1;Parent=gene-D8M19_07685;Dbxref=NCBI_GP:RUP92518.1;Name=RUP92518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281071.1;locus_tag=D8M19_07685;product=ABC transporter permease;protein_id=RUP92518.1;transl_table=11 RBLY01000006.1 Genbank gene 132747 133937 . - . ID=gene-D8M19_07690;Name=D8M19_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07690 RBLY01000006.1 Protein Homology CDS 132747 133937 . - 0 ID=cds-RUP92519.1;Parent=gene-D8M19_07690;Dbxref=NCBI_GP:RUP92519.1;Name=RUP92519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281069.1;locus_tag=D8M19_07690;product=ABC transporter substrate-binding protein;protein_id=RUP92519.1;transl_table=11 RBLY01000006.1 Genbank gene 134817 135071 . + . ID=gene-D8M19_07695;Name=D8M19_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07695 RBLY01000006.1 GeneMarkS+ CDS 134817 135071 . + 0 ID=cds-RUP92520.1;Parent=gene-D8M19_07695;Dbxref=NCBI_GP:RUP92520.1;Name=RUP92520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07695;product=hypothetical protein;protein_id=RUP92520.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 135126 136020 . - . ID=gene-D8M19_07700;Name=D8M19_07700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07700;pseudo=true RBLY01000006.1 Protein Homology CDS 135126 136020 . - 0 ID=cds-D8M19_07700;Parent=gene-D8M19_07700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600262.1;locus_tag=D8M19_07700;product=IS110 family transposase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 136524 137009 . + . ID=gene-D8M19_07705;Name=D8M19_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07705 RBLY01000006.1 Protein Homology CDS 136524 137009 . + 0 ID=cds-RUP92521.1;Parent=gene-D8M19_07705;Dbxref=NCBI_GP:RUP92521.1;Name=RUP92521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887589.1;locus_tag=D8M19_07705;product=Rrf2 family transcriptional regulator;protein_id=RUP92521.1;transl_table=11 RBLY01000006.1 Genbank gene 137029 138237 . + . ID=gene-D8M19_07710;Name=D8M19_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07710 RBLY01000006.1 Protein Homology CDS 137029 138237 . + 0 ID=cds-RUP92522.1;Parent=gene-D8M19_07710;Dbxref=NCBI_GP:RUP92522.1;Name=RUP92522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887590.1;locus_tag=D8M19_07710;product=hemin transporter;protein_id=RUP92522.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 138259 139015 . + . ID=gene-D8M19_07715;Name=D8M19_07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07715;pseudo=true RBLY01000006.1 Protein Homology CDS 138259 139015 . + 0 ID=cds-D8M19_07715;Parent=gene-D8M19_07715;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188841.1;locus_tag=D8M19_07715;product=lysine--tRNA ligase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 139357 140172 . - . ID=gene-D8M19_07720;Name=D8M19_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07720 RBLY01000006.1 Protein Homology CDS 139357 140172 . - 0 ID=cds-RUP92523.1;Parent=gene-D8M19_07720;Dbxref=NCBI_GP:RUP92523.1;Name=RUP92523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121059.1;locus_tag=D8M19_07720;product=hypothetical protein;protein_id=RUP92523.1;transl_table=11 RBLY01000006.1 Genbank gene 140291 140385 . - . ID=gene-D8M19_07725;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=D8M19_07725 RBLY01000006.1 cmsearch SRP_RNA 140291 140385 . - . ID=rna-D8M19_07725;Parent=gene-D8M19_07725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_07725;product=signal recognition particle sRNA small type RBLY01000006.1 cmsearch exon 140291 140385 . - . ID=exon-D8M19_07725-1;Parent=rna-D8M19_07725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_07725;product=signal recognition particle sRNA small type RBLY01000006.1 Genbank gene 140689 141891 . + . ID=gene-D8M19_07730;Name=D8M19_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07730 RBLY01000006.1 Protein Homology CDS 140689 141891 . + 0 ID=cds-RUP92616.1;Parent=gene-D8M19_07730;Dbxref=NCBI_GP:RUP92616.1;Name=RUP92616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006062260.1;locus_tag=D8M19_07730;product=YibE/F family protein;protein_id=RUP92616.1;transl_table=11 RBLY01000006.1 Genbank gene 142262 143209 . - . ID=gene-D8M19_07735;Name=D8M19_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07735 RBLY01000006.1 Protein Homology CDS 142262 143209 . - 0 ID=cds-RUP92524.1;Parent=gene-D8M19_07735;Dbxref=NCBI_GP:RUP92524.1;Name=RUP92524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121056.1;locus_tag=D8M19_07735;product=siderophore-interacting protein;protein_id=RUP92524.1;transl_table=11 RBLY01000006.1 Genbank gene 143272 144393 . - . ID=gene-D8M19_07740;Name=D8M19_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07740 RBLY01000006.1 Protein Homology CDS 143272 144393 . - 0 ID=cds-RUP92525.1;Parent=gene-D8M19_07740;Dbxref=NCBI_GP:RUP92525.1;Name=RUP92525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121055.1;locus_tag=D8M19_07740;product=glycosyltransferase family 1 protein;protein_id=RUP92525.1;transl_table=11 RBLY01000006.1 Genbank gene 144442 145632 . - . ID=gene-D8M19_07745;Name=D8M19_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07745 RBLY01000006.1 GeneMarkS+ CDS 144442 145632 . - 0 ID=cds-RUP92526.1;Parent=gene-D8M19_07745;Dbxref=NCBI_GP:RUP92526.1;Name=RUP92526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07745;product=hypothetical protein;protein_id=RUP92526.1;transl_table=11 RBLY01000006.1 Genbank gene 145915 146727 . + . ID=gene-D8M19_07750;Name=D8M19_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07750 RBLY01000006.1 Protein Homology CDS 145915 146727 . + 0 ID=cds-RUP92527.1;Parent=gene-D8M19_07750;Dbxref=NCBI_GP:RUP92527.1;Name=RUP92527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121536.1;locus_tag=D8M19_07750;product=class I SAM-dependent methyltransferase;protein_id=RUP92527.1;transl_table=11 RBLY01000006.1 Genbank gene 146814 147221 . - . ID=gene-D8M19_07755;Name=D8M19_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07755 RBLY01000006.1 GeneMarkS+ CDS 146814 147221 . - 0 ID=cds-RUP92528.1;Parent=gene-D8M19_07755;Dbxref=NCBI_GP:RUP92528.1;Name=RUP92528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07755;product=hypothetical protein;protein_id=RUP92528.1;transl_table=11 RBLY01000006.1 Genbank gene 147693 148442 . + . ID=gene-D8M19_07760;Name=D8M19_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07760 RBLY01000006.1 GeneMarkS+ CDS 147693 148442 . + 0 ID=cds-RUP92529.1;Parent=gene-D8M19_07760;Dbxref=NCBI_GP:RUP92529.1;Name=RUP92529.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07760;product=hypothetical protein;protein_id=RUP92529.1;transl_table=11 RBLY01000006.1 Genbank gene 148819 150522 . - . ID=gene-D8M19_07765;Name=D8M19_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07765 RBLY01000006.1 Protein Homology CDS 148819 150522 . - 0 ID=cds-RUP92530.1;Parent=gene-D8M19_07765;Dbxref=NCBI_GP:RUP92530.1;Name=RUP92530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007237351.1;locus_tag=D8M19_07765;product=ATP-dependent helicase;protein_id=RUP92530.1;transl_table=11 RBLY01000006.1 Genbank gene 150519 150974 . - . ID=gene-D8M19_07770;Name=D8M19_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07770 RBLY01000006.1 GeneMarkS+ CDS 150519 150974 . - 0 ID=cds-RUP92531.1;Parent=gene-D8M19_07770;Dbxref=NCBI_GP:RUP92531.1;Name=RUP92531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07770;product=hypothetical protein;protein_id=RUP92531.1;transl_table=11 RBLY01000006.1 Genbank gene 151103 151282 . + . ID=gene-D8M19_07775;Name=D8M19_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07775 RBLY01000006.1 GeneMarkS+ CDS 151103 151282 . + 0 ID=cds-RUP92532.1;Parent=gene-D8M19_07775;Dbxref=NCBI_GP:RUP92532.1;Name=RUP92532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07775;product=hypothetical protein;protein_id=RUP92532.1;transl_table=11 RBLY01000006.1 Genbank gene 151286 151690 . + . ID=gene-D8M19_07780;Name=D8M19_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07780 RBLY01000006.1 Protein Homology CDS 151286 151690 . + 0 ID=cds-RUP92533.1;Parent=gene-D8M19_07780;Dbxref=NCBI_GP:RUP92533.1;Name=RUP92533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13630.4;locus_tag=D8M19_07780;product=SdpI family protein;protein_id=RUP92533.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 151790 153000 . - . ID=gene-D8M19_07785;Name=D8M19_07785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07785;pseudo=true RBLY01000006.1 Protein Homology CDS 151790 153000 . - 0 ID=cds-D8M19_07785;Parent=gene-D8M19_07785;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005297400.1;locus_tag=D8M19_07785;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank pseudogene 153075 154239 . - . ID=gene-D8M19_07790;Name=D8M19_07790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_07790;pseudo=true RBLY01000006.1 Protein Homology CDS 153075 154239 . - 0 ID=cds-D8M19_07790;Parent=gene-D8M19_07790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016444513.1;locus_tag=D8M19_07790;product=type II toxin-antitoxin system HipA family toxin;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 154239 154454 . - . ID=gene-D8M19_07795;Name=D8M19_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07795 RBLY01000006.1 Protein Homology CDS 154239 154454 . - 0 ID=cds-RUP92534.1;Parent=gene-D8M19_07795;Dbxref=NCBI_GP:RUP92534.1;Name=RUP92534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013347488.1;locus_tag=D8M19_07795;product=transcriptional regulator;protein_id=RUP92534.1;transl_table=11 RBLY01000006.1 Genbank gene 154719 156551 . - . ID=gene-D8M19_07800;Name=D8M19_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07800 RBLY01000006.1 Protein Homology CDS 154719 156551 . - 0 ID=cds-RUP92535.1;Parent=gene-D8M19_07800;Dbxref=NCBI_GP:RUP92535.1;Name=RUP92535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121541.1;locus_tag=D8M19_07800;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=RUP92535.1;transl_table=11 RBLY01000006.1 Genbank gene 156829 157689 . + . ID=gene-D8M19_07805;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=D8M19_07805 RBLY01000006.1 Protein Homology CDS 156829 157689 . + 0 ID=cds-RUP92536.1;Parent=gene-D8M19_07805;Dbxref=NCBI_GP:RUP92536.1;Name=RUP92536.1;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005279755.1;locus_tag=D8M19_07805;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=RUP92536.1;transl_table=11 RBLY01000006.1 Genbank gene 157830 158489 . + . ID=gene-D8M19_07810;Name=D8M19_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07810 RBLY01000006.1 Protein Homology CDS 157830 158489 . + 0 ID=cds-RUP92537.1;Parent=gene-D8M19_07810;Dbxref=NCBI_GP:RUP92537.1;Name=RUP92537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121543.1;locus_tag=D8M19_07810;product=NYN domain-containing protein;protein_id=RUP92537.1;transl_table=11 RBLY01000006.1 Genbank gene 158498 160822 . + . ID=gene-D8M19_07815;Name=D8M19_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07815 RBLY01000006.1 Protein Homology CDS 158498 160822 . + 0 ID=cds-RUP92538.1;Parent=gene-D8M19_07815;Dbxref=NCBI_GP:RUP92538.1;Name=RUP92538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121544.1;locus_tag=D8M19_07815;product=MMPL family transporter;protein_id=RUP92538.1;transl_table=11 RBLY01000006.1 Genbank gene 160837 161874 . + . ID=gene-D8M19_07820;Name=D8M19_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07820 RBLY01000006.1 Protein Homology CDS 160837 161874 . + 0 ID=cds-RUP92539.1;Parent=gene-D8M19_07820;Dbxref=NCBI_GP:RUP92539.1;Name=RUP92539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822551.1;locus_tag=D8M19_07820;product=UPF0104 family protein;protein_id=RUP92539.1;transl_table=11 RBLY01000006.1 Genbank gene 161880 162278 . + . ID=gene-D8M19_07825;Name=D8M19_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07825 RBLY01000006.1 Protein Homology CDS 161880 162278 . + 0 ID=cds-RUP92540.1;Parent=gene-D8M19_07825;Dbxref=NCBI_GP:RUP92540.1;Name=RUP92540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402015.1;locus_tag=D8M19_07825;product=DUF3054 domain-containing protein;protein_id=RUP92540.1;transl_table=11 RBLY01000006.1 Genbank gene 162192 163160 . - . ID=gene-D8M19_07830;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=D8M19_07830 RBLY01000006.1 Protein Homology CDS 162192 163160 . - 0 ID=cds-RUP92541.1;Parent=gene-D8M19_07830;Dbxref=NCBI_GP:RUP92541.1;Name=RUP92541.1;gbkey=CDS;gene=rarD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121547.1;locus_tag=D8M19_07830;product=EamA family transporter RarD;protein_id=RUP92541.1;transl_table=11 RBLY01000006.1 Genbank gene 163679 163954 . + . ID=gene-D8M19_07835;Name=D8M19_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07835 RBLY01000006.1 Protein Homology CDS 163679 163954 . + 0 ID=cds-RUP92542.1;Parent=gene-D8M19_07835;Dbxref=NCBI_GP:RUP92542.1;Name=RUP92542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014836338.1;locus_tag=D8M19_07835;product=hypothetical protein;protein_id=RUP92542.1;transl_table=11 RBLY01000006.1 Genbank gene 163947 165491 . - . ID=gene-D8M19_07840;Name=D8M19_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07840 RBLY01000006.1 Protein Homology CDS 163947 165491 . - 0 ID=cds-RUP92543.1;Parent=gene-D8M19_07840;Dbxref=NCBI_GP:RUP92543.1;Name=RUP92543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188576.1;locus_tag=D8M19_07840;product=acyl-CoA carboxylase subunit beta;protein_id=RUP92543.1;transl_table=11 RBLY01000006.1 Genbank gene 165492 170537 . - . ID=gene-D8M19_07845;Name=D8M19_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07845 RBLY01000006.1 Protein Homology CDS 165492 170537 . - 0 ID=cds-RUP92544.1;Parent=gene-D8M19_07845;Dbxref=NCBI_GP:RUP92544.1;Name=RUP92544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121550.1;locus_tag=D8M19_07845;product=acyltransferase domain-containing protein;protein_id=RUP92544.1;transl_table=11 RBLY01000006.1 Genbank gene 170538 172382 . - . ID=gene-D8M19_07850;Name=D8M19_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07850 RBLY01000006.1 Protein Homology CDS 170538 172382 . - 0 ID=cds-RUP92545.1;Parent=gene-D8M19_07850;Dbxref=NCBI_GP:RUP92545.1;Name=RUP92545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121551.1;locus_tag=D8M19_07850;product=acyl-CoA synthase;protein_id=RUP92545.1;transl_table=11 RBLY01000006.1 Genbank gene 172655 173566 . - . ID=gene-D8M19_07855;Name=D8M19_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07855 RBLY01000006.1 Protein Homology CDS 172655 173566 . - 0 ID=cds-RUP92546.1;Parent=gene-D8M19_07855;Dbxref=NCBI_GP:RUP92546.1;Name=RUP92546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121552.1;locus_tag=D8M19_07855;product=cutinase family protein;protein_id=RUP92546.1;transl_table=11 RBLY01000006.1 Genbank gene 173631 174257 . - . ID=gene-D8M19_07860;Name=D8M19_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07860 RBLY01000006.1 GeneMarkS+ CDS 173631 174257 . - 0 ID=cds-RUP92547.1;Parent=gene-D8M19_07860;Dbxref=NCBI_GP:RUP92547.1;Name=RUP92547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07860;product=hypothetical protein;protein_id=RUP92547.1;transl_table=11 RBLY01000006.1 Genbank gene 174257 176254 . - . ID=gene-D8M19_07865;Name=D8M19_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07865 RBLY01000006.1 Protein Homology CDS 174257 176254 . - 0 ID=cds-RUP92548.1;Parent=gene-D8M19_07865;Dbxref=NCBI_GP:RUP92548.1;Name=RUP92548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121554.1;locus_tag=D8M19_07865;product=hypothetical protein;protein_id=RUP92548.1;transl_table=11 RBLY01000006.1 Genbank gene 176581 177603 . - . ID=gene-D8M19_07870;Name=D8M19_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07870 RBLY01000006.1 Protein Homology CDS 176581 177603 . - 0 ID=cds-RUP92549.1;Parent=gene-D8M19_07870;Dbxref=NCBI_GP:RUP92549.1;Name=RUP92549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121555.1;locus_tag=D8M19_07870;product=esterase family protein;protein_id=RUP92549.1;transl_table=11 RBLY01000006.1 Genbank gene 177810 178793 . - . ID=gene-D8M19_07875;Name=D8M19_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07875 RBLY01000006.1 Protein Homology CDS 177810 178793 . - 0 ID=cds-RUP92550.1;Parent=gene-D8M19_07875;Dbxref=NCBI_GP:RUP92550.1;Name=RUP92550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121556.1;locus_tag=D8M19_07875;product=decaprenyl-phosphate phosphoribosyltransferase;protein_id=RUP92550.1;transl_table=11 RBLY01000006.1 Genbank gene 178794 179324 . - . ID=gene-D8M19_07880;Name=D8M19_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07880 RBLY01000006.1 Protein Homology CDS 178794 179324 . - 0 ID=cds-RUP92551.1;Parent=gene-D8M19_07880;Dbxref=NCBI_GP:RUP92551.1;Name=RUP92551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325407.1;locus_tag=D8M19_07880;product=phosphatase PAP2 family protein;protein_id=RUP92551.1;transl_table=11 RBLY01000006.1 Genbank gene 179314 181263 . - . ID=gene-D8M19_07885;Name=D8M19_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07885 RBLY01000006.1 Protein Homology CDS 179314 181263 . - 0 ID=cds-RUP92552.1;Parent=gene-D8M19_07885;Dbxref=NCBI_GP:RUP92552.1;Name=RUP92552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325405.1;locus_tag=D8M19_07885;product=glycosyltransferase family 2 protein;protein_id=RUP92552.1;transl_table=11 RBLY01000006.1 Genbank gene 181343 182533 . - . ID=gene-D8M19_07890;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=D8M19_07890 RBLY01000006.1 Protein Homology CDS 181343 182533 . - 0 ID=cds-RUP92553.1;Parent=gene-D8M19_07890;Dbxref=NCBI_GP:RUP92553.1;Name=RUP92553.1;gbkey=CDS;gene=glf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529460.1;locus_tag=D8M19_07890;product=UDP-galactopyranose mutase;protein_id=RUP92553.1;transl_table=11 RBLY01000006.1 Genbank gene 182860 185010 . + . ID=gene-D8M19_07895;Name=D8M19_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07895 RBLY01000006.1 Protein Homology CDS 182860 185010 . + 0 ID=cds-RUP92554.1;Parent=gene-D8M19_07895;Dbxref=NCBI_GP:RUP92554.1;Name=RUP92554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121560.1;locus_tag=D8M19_07895;product=hypothetical protein;protein_id=RUP92554.1;transl_table=11 RBLY01000006.1 Genbank gene 185007 186572 . - . ID=gene-D8M19_07900;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=D8M19_07900 RBLY01000006.1 Protein Homology CDS 185007 186572 . - 0 ID=cds-RUP92555.1;Parent=gene-D8M19_07900;Dbxref=NCBI_GP:RUP92555.1;Name=RUP92555.1;gbkey=CDS;gene=glpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121561.1;locus_tag=D8M19_07900;product=glycerol kinase GlpK;protein_id=RUP92555.1;transl_table=11 RBLY01000006.1 Genbank gene 186580 187413 . - . ID=gene-D8M19_07905;Name=D8M19_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07905 RBLY01000006.1 Protein Homology CDS 186580 187413 . - 0 ID=cds-RUP92617.1;Parent=gene-D8M19_07905;Dbxref=NCBI_GP:RUP92617.1;Name=RUP92617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013912548.1;locus_tag=D8M19_07905;product=Cof-type HAD-IIB family hydrolase;protein_id=RUP92617.1;transl_table=11 RBLY01000006.1 Genbank gene 187431 188327 . - . ID=gene-D8M19_07910;Name=D8M19_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07910 RBLY01000006.1 Protein Homology CDS 187431 188327 . - 0 ID=cds-RUP92556.1;Parent=gene-D8M19_07910;Dbxref=NCBI_GP:RUP92556.1;Name=RUP92556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121563.1;locus_tag=D8M19_07910;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RUP92556.1;transl_table=11 RBLY01000006.1 Genbank gene 188324 189574 . - . ID=gene-D8M19_07915;Name=D8M19_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07915 RBLY01000006.1 Protein Homology CDS 188324 189574 . - 0 ID=cds-RUP92557.1;Parent=gene-D8M19_07915;Dbxref=NCBI_GP:RUP92557.1;Name=RUP92557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402047.1;locus_tag=D8M19_07915;product=serine--tRNA ligase;protein_id=RUP92557.1;transl_table=11 RBLY01000006.1 Genbank gene 189655 190641 . + . ID=gene-D8M19_07920;Name=D8M19_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07920 RBLY01000006.1 Protein Homology CDS 189655 190641 . + 0 ID=cds-RUP92558.1;Parent=gene-D8M19_07920;Dbxref=NCBI_GP:RUP92558.1;Name=RUP92558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121565.1;locus_tag=D8M19_07920;product=hypothetical protein;protein_id=RUP92558.1;transl_table=11 RBLY01000006.1 Genbank gene 190701 191048 . + . ID=gene-D8M19_07925;Name=D8M19_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07925 RBLY01000006.1 Protein Homology CDS 190701 191048 . + 0 ID=cds-RUP92618.1;Parent=gene-D8M19_07925;Dbxref=NCBI_GP:RUP92618.1;Name=RUP92618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847933.1;locus_tag=D8M19_07925;product=metallopeptidase family protein;protein_id=RUP92618.1;transl_table=11 RBLY01000006.1 Genbank gene 191095 191748 . - . ID=gene-D8M19_07930;Name=D8M19_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07930 RBLY01000006.1 Protein Homology CDS 191095 191748 . - 0 ID=cds-RUP92559.1;Parent=gene-D8M19_07930;Dbxref=NCBI_GP:RUP92559.1;Name=RUP92559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822516.1;locus_tag=D8M19_07930;product=histidine phosphatase family protein;protein_id=RUP92559.1;transl_table=11 RBLY01000006.1 Genbank gene 191751 192674 . - . ID=gene-D8M19_07935;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=D8M19_07935 RBLY01000006.1 Protein Homology CDS 191751 192674 . - 0 ID=cds-RUP92560.1;Parent=gene-D8M19_07935;Dbxref=NCBI_GP:RUP92560.1;Name=RUP92560.1;gbkey=CDS;gene=pheA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121568.1;locus_tag=D8M19_07935;product=prephenate dehydratase;protein_id=RUP92560.1;transl_table=11 RBLY01000006.1 Genbank gene 192699 193823 . + . ID=gene-D8M19_07940;Name=D8M19_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07940 RBLY01000006.1 Protein Homology CDS 192699 193823 . + 0 ID=cds-RUP92561.1;Parent=gene-D8M19_07940;Dbxref=NCBI_GP:RUP92561.1;Name=RUP92561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121570.1;locus_tag=D8M19_07940;product=amidase;protein_id=RUP92561.1;transl_table=11 RBLY01000006.1 Genbank gene 194445 195743 . + . ID=gene-D8M19_07945;Name=D8M19_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07945 RBLY01000006.1 Protein Homology CDS 194445 195743 . + 0 ID=cds-RUP92619.1;Parent=gene-D8M19_07945;Dbxref=NCBI_GP:RUP92619.1;Name=RUP92619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011076067.1;locus_tag=D8M19_07945;product=LytR family transcriptional regulator;protein_id=RUP92619.1;transl_table=11 RBLY01000006.1 Genbank gene 195791 196879 . - . ID=gene-D8M19_07950;Name=D8M19_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07950 RBLY01000006.1 Protein Homology CDS 195791 196879 . - 0 ID=cds-RUP92620.1;Parent=gene-D8M19_07950;Dbxref=NCBI_GP:RUP92620.1;Name=RUP92620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328177.1;locus_tag=D8M19_07950;product=alkene reductase;protein_id=RUP92620.1;transl_table=11 RBLY01000006.1 Genbank gene 196998 197918 . - . ID=gene-D8M19_07955;Name=D8M19_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07955 RBLY01000006.1 Protein Homology CDS 196998 197918 . - 0 ID=cds-RUP92562.1;Parent=gene-D8M19_07955;Dbxref=NCBI_GP:RUP92562.1;Name=RUP92562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188492.1;locus_tag=D8M19_07955;product=preprotein translocase subunit SecA;protein_id=RUP92562.1;transl_table=11 RBLY01000006.1 Genbank gene 198096 198311 . + . ID=gene-D8M19_07960;Name=D8M19_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07960 RBLY01000006.1 GeneMarkS+ CDS 198096 198311 . + 0 ID=cds-RUP92563.1;Parent=gene-D8M19_07960;Dbxref=NCBI_GP:RUP92563.1;Name=RUP92563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07960;product=transposase;protein_id=RUP92563.1;transl_table=11 RBLY01000006.1 Genbank gene 198555 199784 . - . ID=gene-D8M19_07965;Name=D8M19_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07965 RBLY01000006.1 Protein Homology CDS 198555 199784 . - 0 ID=cds-RUP92564.1;Parent=gene-D8M19_07965;Dbxref=NCBI_GP:RUP92564.1;Name=RUP92564.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02687.19;locus_tag=D8M19_07965;product=FtsX-like permease family protein;protein_id=RUP92564.1;transl_table=11 RBLY01000006.1 Genbank gene 199765 200619 . - . ID=gene-D8M19_07970;Name=D8M19_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07970 RBLY01000006.1 GeneMarkS+ CDS 199765 200619 . - 0 ID=cds-RUP92565.1;Parent=gene-D8M19_07970;Dbxref=NCBI_GP:RUP92565.1;Name=RUP92565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07970;product=hypothetical protein;protein_id=RUP92565.1;transl_table=11 RBLY01000006.1 Genbank gene 200606 201259 . - . ID=gene-D8M19_07975;Name=D8M19_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07975 RBLY01000006.1 Protein Homology CDS 200606 201259 . - 0 ID=cds-RUP92566.1;Parent=gene-D8M19_07975;Dbxref=NCBI_GP:RUP92566.1;Name=RUP92566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;locus_tag=D8M19_07975;product=ATP-binding cassette domain-containing protein;protein_id=RUP92566.1;transl_table=11 RBLY01000006.1 Genbank gene 201258 201572 . + . ID=gene-D8M19_07980;Name=D8M19_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07980 RBLY01000006.1 GeneMarkS+ CDS 201258 201572 . + 0 ID=cds-RUP92567.1;Parent=gene-D8M19_07980;Dbxref=NCBI_GP:RUP92567.1;Name=RUP92567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_07980;product=hypothetical protein;protein_id=RUP92567.1;transl_table=11 RBLY01000006.1 Genbank gene 201657 202382 . - . ID=gene-D8M19_07985;Name=D8M19_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07985 RBLY01000006.1 Protein Homology CDS 201657 202382 . - 0 ID=cds-RUP92568.1;Parent=gene-D8M19_07985;Dbxref=NCBI_GP:RUP92568.1;Name=RUP92568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121639.1;locus_tag=D8M19_07985;product=glycerophosphodiester phosphodiesterase;protein_id=RUP92568.1;transl_table=11 RBLY01000006.1 Genbank gene 202418 203086 . - . ID=gene-D8M19_07990;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=D8M19_07990 RBLY01000006.1 Protein Homology CDS 202418 203086 . - 0 ID=cds-RUP92569.1;Parent=gene-D8M19_07990;Dbxref=NCBI_GP:RUP92569.1;Name=RUP92569.1;gbkey=CDS;gene=msrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005509953.1;locus_tag=D8M19_07990;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=RUP92569.1;transl_table=11 RBLY01000006.1 Genbank gene 203269 203871 . + . ID=gene-D8M19_07995;Name=D8M19_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_07995 RBLY01000006.1 Protein Homology CDS 203269 203871 . + 0 ID=cds-RUP92570.1;Parent=gene-D8M19_07995;Dbxref=NCBI_GP:RUP92570.1;Name=RUP92570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822499.1;locus_tag=D8M19_07995;product=superoxide dismutase;protein_id=RUP92570.1;transl_table=11 RBLY01000006.1 Genbank gene 204013 204420 . - . ID=gene-D8M19_08000;Name=D8M19_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08000 RBLY01000006.1 Protein Homology CDS 204013 204420 . - 0 ID=cds-RUP92571.1;Parent=gene-D8M19_08000;Dbxref=NCBI_GP:RUP92571.1;Name=RUP92571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283268.1;locus_tag=D8M19_08000;product=hypothetical protein;protein_id=RUP92571.1;transl_table=11 RBLY01000006.1 Genbank gene 204429 204836 . - . ID=gene-D8M19_08005;Name=D8M19_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08005 RBLY01000006.1 Protein Homology CDS 204429 204836 . - 0 ID=cds-RUP92572.1;Parent=gene-D8M19_08005;Dbxref=NCBI_GP:RUP92572.1;Name=RUP92572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09056.9;locus_tag=D8M19_08005;product=hypothetical protein;protein_id=RUP92572.1;transl_table=11 RBLY01000006.1 Genbank gene 205550 205729 . + . ID=gene-D8M19_08010;Name=D8M19_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08010 RBLY01000006.1 Protein Homology CDS 205550 205729 . + 0 ID=cds-RUP92573.1;Parent=gene-D8M19_08010;Dbxref=NCBI_GP:RUP92573.1;Name=RUP92573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13683.4;locus_tag=D8M19_08010;product=hypothetical protein;protein_id=RUP92573.1;transl_table=11 RBLY01000006.1 Genbank gene 205984 206496 . - . ID=gene-D8M19_08015;Name=D8M19_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08015 RBLY01000006.1 Protein Homology CDS 205984 206496 . - 0 ID=cds-RUP92621.1;Parent=gene-D8M19_08015;Dbxref=NCBI_GP:RUP92621.1;Name=RUP92621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650345.1;locus_tag=D8M19_08015;product=hypothetical protein;protein_id=RUP92621.1;transl_table=11 RBLY01000006.1 Genbank gene 206711 207445 . - . ID=gene-D8M19_08020;Name=D8M19_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08020 RBLY01000006.1 Protein Homology CDS 206711 207445 . - 0 ID=cds-RUP92574.1;Parent=gene-D8M19_08020;Dbxref=NCBI_GP:RUP92574.1;Name=RUP92574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019483746.1;locus_tag=D8M19_08020;product=recombinase family protein;protein_id=RUP92574.1;transl_table=11 RBLY01000006.1 Genbank gene 207469 207795 . - . ID=gene-D8M19_08025;Name=D8M19_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08025 RBLY01000006.1 Protein Homology CDS 207469 207795 . - 0 ID=cds-RUP92575.1;Parent=gene-D8M19_08025;Dbxref=NCBI_GP:RUP92575.1;Name=RUP92575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018018305.1;locus_tag=D8M19_08025;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=RUP92575.1;transl_table=11 RBLY01000006.1 Genbank gene 207801 208073 . - . ID=gene-D8M19_08030;Name=D8M19_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08030 RBLY01000006.1 Protein Homology CDS 207801 208073 . - 0 ID=cds-RUP92576.1;Parent=gene-D8M19_08030;Dbxref=NCBI_GP:RUP92576.1;Name=RUP92576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005506120.1;locus_tag=D8M19_08030;product=toxin HicA;protein_id=RUP92576.1;transl_table=11 RBLY01000006.1 Genbank pseudogene 208596 208851 . - . ID=gene-D8M19_08035;Name=D8M19_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_08035;pseudo=true RBLY01000006.1 Protein Homology CDS 208596 208851 . - 0 ID=cds-D8M19_08035;Parent=gene-D8M19_08035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011076155.1;locus_tag=D8M19_08035;product=IS256 family transposase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank pseudogene 208936 210151 . - . ID=gene-D8M19_08040;Name=D8M19_08040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_08040;pseudo=true RBLY01000006.1 Protein Homology CDS 208936 210151 . - 0 ID=cds-D8M19_08040;Parent=gene-D8M19_08040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611980.1;locus_tag=D8M19_08040;product=IS3 family transposase;pseudo=true;transl_table=11 RBLY01000006.1 Genbank gene 210380 210607 . - . ID=gene-D8M19_08045;Name=D8M19_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08045 RBLY01000006.1 GeneMarkS+ CDS 210380 210607 . - 0 ID=cds-RUP92577.1;Parent=gene-D8M19_08045;Dbxref=NCBI_GP:RUP92577.1;Name=RUP92577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08045;product=hypothetical protein;protein_id=RUP92577.1;transl_table=11 RBLY01000006.1 Genbank gene 210608 211561 . - . ID=gene-D8M19_08050;Name=D8M19_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08050 RBLY01000006.1 GeneMarkS+ CDS 210608 211561 . - 0 ID=cds-RUP92578.1;Parent=gene-D8M19_08050;Dbxref=NCBI_GP:RUP92578.1;Name=RUP92578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08050;product=hypothetical protein;protein_id=RUP92578.1;transl_table=11 RBLY01000006.1 Genbank gene 211999 212187 . + . ID=gene-D8M19_08055;Name=D8M19_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08055 RBLY01000006.1 Protein Homology CDS 211999 212187 . + 0 ID=cds-RUP92579.1;Parent=gene-D8M19_08055;Dbxref=NCBI_GP:RUP92579.1;Name=RUP92579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119880.1;locus_tag=D8M19_08055;product=hypothetical protein;protein_id=RUP92579.1;transl_table=11 RBLY01000006.1 Genbank gene 212265 212747 . + . ID=gene-D8M19_08060;Name=D8M19_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08060 RBLY01000006.1 Protein Homology CDS 212265 212747 . + 0 ID=cds-RUP92580.1;Parent=gene-D8M19_08060;Dbxref=NCBI_GP:RUP92580.1;Name=RUP92580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13276.4;locus_tag=D8M19_08060;product=hypothetical protein;protein_id=RUP92580.1;transl_table=11 RBLY01000006.1 Genbank gene 212902 213099 . - . ID=gene-D8M19_08065;Name=D8M19_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08065 RBLY01000006.1 Protein Homology CDS 212902 213099 . - 0 ID=cds-RUP92581.1;Parent=gene-D8M19_08065;Dbxref=NCBI_GP:RUP92581.1;Name=RUP92581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005283268.1;locus_tag=D8M19_08065;product=hypothetical protein;protein_id=RUP92581.1;transl_table=11 RBLY01000006.1 Genbank gene 213107 214321 . + . ID=gene-D8M19_08070;Name=D8M19_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08070 RBLY01000006.1 Protein Homology CDS 213107 214321 . + 0 ID=cds-RUP92582.1;Parent=gene-D8M19_08070;Dbxref=NCBI_GP:RUP92582.1;Name=RUP92582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121635.1;locus_tag=D8M19_08070;product=MFS transporter;protein_id=RUP92582.1;transl_table=11 RBLY01000006.1 Genbank gene 214322 215992 . - . ID=gene-D8M19_08075;Name=D8M19_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08075 RBLY01000006.1 Protein Homology CDS 214322 215992 . - 0 ID=cds-RUP92583.1;Parent=gene-D8M19_08075;Dbxref=NCBI_GP:RUP92583.1;Name=RUP92583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121634.1;locus_tag=D8M19_08075;product=TM0106 family RecB-like putative nuclease;protein_id=RUP92583.1;transl_table=11 RBLY01000006.1 Genbank gene 216079 216714 . + . ID=gene-D8M19_08080;Name=D8M19_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08080 RBLY01000006.1 Protein Homology CDS 216079 216714 . + 0 ID=cds-RUP92584.1;Parent=gene-D8M19_08080;Dbxref=NCBI_GP:RUP92584.1;Name=RUP92584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121633.1;locus_tag=D8M19_08080;product=hypothetical protein;protein_id=RUP92584.1;transl_table=11 RBLY01000006.1 Genbank gene 216724 217362 . - . ID=gene-D8M19_08085;Name=D8M19_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08085 RBLY01000006.1 Protein Homology CDS 216724 217362 . - 0 ID=cds-RUP92585.1;Parent=gene-D8M19_08085;Dbxref=NCBI_GP:RUP92585.1;Name=RUP92585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015402079.1;locus_tag=D8M19_08085;product=DNA-binding response regulator;protein_id=RUP92585.1;transl_table=11 RBLY01000006.1 Genbank gene 217416 218618 . - . ID=gene-D8M19_08090;Name=D8M19_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08090 RBLY01000006.1 Protein Homology CDS 217416 218618 . - 0 ID=cds-RUP92622.1;Parent=gene-D8M19_08090;Dbxref=NCBI_GP:RUP92622.1;Name=RUP92622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188463.1;locus_tag=D8M19_08090;product=sensor histidine kinase;protein_id=RUP92622.1;transl_table=11 RBLY01000006.1 Genbank gene 218848 220110 . + . ID=gene-D8M19_08095;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=D8M19_08095 RBLY01000006.1 Protein Homology CDS 218848 220110 . + 0 ID=cds-RUP92586.1;Parent=gene-D8M19_08095;Dbxref=NCBI_GP:RUP92586.1;Name=RUP92586.1;gbkey=CDS;gene=yidC;inference=COORDINATES: protein motif:HMM:TIGR03592;locus_tag=D8M19_08095;product=membrane protein insertase YidC;protein_id=RUP92586.1;transl_table=11 RBLY01000006.1 Genbank gene 220107 220733 . - . ID=gene-D8M19_08100;Name=D8M19_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08100 RBLY01000006.1 Protein Homology CDS 220107 220733 . - 0 ID=cds-RUP92587.1;Parent=gene-D8M19_08100;Dbxref=NCBI_GP:RUP92587.1;Name=RUP92587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121629.1;locus_tag=D8M19_08100;product=TetR/AcrR family transcriptional regulator;protein_id=RUP92587.1;transl_table=11 RBLY01000006.1 Genbank gene 220922 221179 . - . ID=gene-D8M19_08105;Name=D8M19_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08105 RBLY01000006.1 Protein Homology CDS 220922 221179 . - 0 ID=cds-RUP92588.1;Parent=gene-D8M19_08105;Dbxref=NCBI_GP:RUP92588.1;Name=RUP92588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121628.1;locus_tag=D8M19_08105;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=RUP92588.1;transl_table=11 RBLY01000006.1 Genbank gene 221183 222079 . - . ID=gene-D8M19_08110;Name=D8M19_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08110 RBLY01000006.1 Protein Homology CDS 221183 222079 . - 0 ID=cds-RUP92589.1;Parent=gene-D8M19_08110;Dbxref=NCBI_GP:RUP92589.1;Name=RUP92589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010188456.1;locus_tag=D8M19_08110;product=universal stress protein;protein_id=RUP92589.1;transl_table=11 RBLY01000006.1 Genbank gene 222459 223463 . + . ID=gene-D8M19_08115;Name=D8M19_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08115 RBLY01000006.1 Protein Homology CDS 222459 223463 . + 0 ID=cds-RUP92590.1;Parent=gene-D8M19_08115;Dbxref=NCBI_GP:RUP92590.1;Name=RUP92590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018019622.1;locus_tag=D8M19_08115;product=23S rRNA pseudouridylate synthase;protein_id=RUP92590.1;transl_table=11 RBLY01000006.1 Genbank gene 223474 225171 . - . ID=gene-D8M19_08120;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=protein_coding;locus_tag=D8M19_08120 RBLY01000006.1 Protein Homology CDS 223474 225171 . - 0 ID=cds-RUP92591.1;Parent=gene-D8M19_08120;Dbxref=NCBI_GP:RUP92591.1;Name=RUP92591.1;gbkey=CDS;gene=crtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121624.1;locus_tag=D8M19_08120;product=phytoene desaturase;protein_id=RUP92591.1;transl_table=11 RBLY01000006.1 Genbank gene 225168 226106 . - . ID=gene-D8M19_08125;Name=D8M19_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08125 RBLY01000006.1 Protein Homology CDS 225168 226106 . - 0 ID=cds-RUP92592.1;Parent=gene-D8M19_08125;Dbxref=NCBI_GP:RUP92592.1;Name=RUP92592.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00494.17;locus_tag=D8M19_08125;product=phytoene/squalene synthase family protein;protein_id=RUP92592.1;transl_table=11 RBLY01000006.1 Genbank gene 226232 226350 . - . ID=gene-D8M19_08130;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=D8M19_08130 RBLY01000006.1 cmsearch rRNA 226232 226350 . - . ID=rna-D8M19_08130;Parent=gene-D8M19_08130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_08130;product=5S ribosomal RNA RBLY01000006.1 cmsearch exon 226232 226350 . - . ID=exon-D8M19_08130-1;Parent=rna-D8M19_08130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_08130;product=5S ribosomal RNA ##sequence-region RBLY01000007.1 1 144230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000007.1 Genbank region 1 144230 . + . ID=RBLY01000007.1:1..144230;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000007.1 Genbank gene 1 93 . + . ID=gene-D8M19_08135;Name=D8M19_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08135;partial=true;start_range=.,1 RBLY01000007.1 Protein Homology CDS 1 93 . + 0 ID=cds-RUP92222.1;Parent=gene-D8M19_08135;Dbxref=NCBI_GP:RUP92222.1;Name=RUP92222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612047.1;locus_tag=D8M19_08135;partial=true;product=hypothetical protein;protein_id=RUP92222.1;start_range=.,1;transl_table=11 RBLY01000007.1 Genbank gene 202 1206 . - . ID=gene-D8M19_08140;Name=D8M19_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08140 RBLY01000007.1 GeneMarkS+ CDS 202 1206 . - 0 ID=cds-RUP92223.1;Parent=gene-D8M19_08140;Dbxref=NCBI_GP:RUP92223.1;Name=RUP92223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08140;product=hypothetical protein;protein_id=RUP92223.1;transl_table=11 RBLY01000007.1 Genbank gene 1464 2273 . - . ID=gene-D8M19_08145;Name=D8M19_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08145 RBLY01000007.1 GeneMarkS+ CDS 1464 2273 . - 0 ID=cds-RUP92224.1;Parent=gene-D8M19_08145;Dbxref=NCBI_GP:RUP92224.1;Name=RUP92224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08145;product=hypothetical protein;protein_id=RUP92224.1;transl_table=11 RBLY01000007.1 Genbank gene 2421 2909 . - . ID=gene-D8M19_08150;Name=D8M19_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08150 RBLY01000007.1 Protein Homology CDS 2421 2909 . - 0 ID=cds-RUP92225.1;Parent=gene-D8M19_08150;Dbxref=NCBI_GP:RUP92225.1;Name=RUP92225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120921.1;locus_tag=D8M19_08150;product=globin;protein_id=RUP92225.1;transl_table=11 RBLY01000007.1 Genbank gene 2890 3939 . - . ID=gene-D8M19_08155;Name=D8M19_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08155 RBLY01000007.1 Protein Homology CDS 2890 3939 . - 0 ID=cds-RUP92226.1;Parent=gene-D8M19_08155;Dbxref=NCBI_GP:RUP92226.1;Name=RUP92226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120922.1;locus_tag=D8M19_08155;product=mechanosensitive ion channel family protein;protein_id=RUP92226.1;transl_table=11 RBLY01000007.1 Genbank gene 4057 5322 . + . ID=gene-D8M19_08160;Name=D8M19_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08160 RBLY01000007.1 Protein Homology CDS 4057 5322 . + 0 ID=cds-RUP92227.1;Parent=gene-D8M19_08160;Dbxref=NCBI_GP:RUP92227.1;Name=RUP92227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120923.1;locus_tag=D8M19_08160;product=cystathionine gamma-synthase;protein_id=RUP92227.1;transl_table=11 RBLY01000007.1 Genbank gene 5357 6103 . + . ID=gene-D8M19_08165;Name=D8M19_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08165 RBLY01000007.1 Protein Homology CDS 5357 6103 . + 0 ID=cds-RUP92228.1;Parent=gene-D8M19_08165;Dbxref=NCBI_GP:RUP92228.1;Name=RUP92228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120924.1;locus_tag=D8M19_08165;product=SDR family oxidoreductase;protein_id=RUP92228.1;transl_table=11 RBLY01000007.1 Genbank gene 6146 8701 . - . ID=gene-D8M19_08170;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=D8M19_08170 RBLY01000007.1 Protein Homology CDS 6146 8701 . - 0 ID=cds-RUP92229.1;Parent=gene-D8M19_08170;Dbxref=NCBI_GP:RUP92229.1;Name=RUP92229.1;gbkey=CDS;gene=pepN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120925.1;locus_tag=D8M19_08170;product=aminopeptidase N;protein_id=RUP92229.1;transl_table=11 RBLY01000007.1 Genbank gene 8976 9587 . + . ID=gene-D8M19_08175;Name=D8M19_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08175 RBLY01000007.1 Protein Homology CDS 8976 9587 . + 0 ID=cds-RUP92230.1;Parent=gene-D8M19_08175;Dbxref=NCBI_GP:RUP92230.1;Name=RUP92230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277874.1;locus_tag=D8M19_08175;product=disulfide bond formation protein DsbA;protein_id=RUP92230.1;transl_table=11 RBLY01000007.1 Genbank pseudogene 9674 9790 . + . ID=gene-D8M19_08180;Name=D8M19_08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_08180;pseudo=true RBLY01000007.1 Protein Homology CDS 9674 9790 . + 0 ID=cds-D8M19_08180;Parent=gene-D8M19_08180;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764373.1;locus_tag=D8M19_08180;product=envelope stress response protein PspG;pseudo=true;transl_table=11 RBLY01000007.1 Genbank gene 9946 10422 . + . ID=gene-D8M19_08185;Name=D8M19_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08185 RBLY01000007.1 Protein Homology CDS 9946 10422 . + 0 ID=cds-RUP92231.1;Parent=gene-D8M19_08185;Dbxref=NCBI_GP:RUP92231.1;Name=RUP92231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327249.1;locus_tag=D8M19_08185;product=ribose-5-phosphate isomerase;protein_id=RUP92231.1;transl_table=11 RBLY01000007.1 Genbank gene 10493 11317 . - . ID=gene-D8M19_08190;Name=D8M19_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08190 RBLY01000007.1 Protein Homology CDS 10493 11317 . - 0 ID=cds-RUP92232.1;Parent=gene-D8M19_08190;Dbxref=NCBI_GP:RUP92232.1;Name=RUP92232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120929.1;locus_tag=D8M19_08190;product=DUF1542 domain-containing protein;protein_id=RUP92232.1;transl_table=11 RBLY01000007.1 Genbank gene 11545 11619 . + . ID=gene-D8M19_08195;Name=D8M19_08195;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_08195 RBLY01000007.1 tRNAscan-SE tRNA 11545 11619 . + . ID=rna-D8M19_08195;Parent=gene-D8M19_08195;anticodon=(pos:11578..11580);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08195;product=tRNA-Gly RBLY01000007.1 tRNAscan-SE exon 11545 11619 . + . ID=exon-D8M19_08195-1;Parent=rna-D8M19_08195;anticodon=(pos:11578..11580);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08195;product=tRNA-Gly RBLY01000007.1 Genbank gene 11798 13543 . + . ID=gene-D8M19_08200;Name=D8M19_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08200 RBLY01000007.1 Protein Homology CDS 11798 13543 . + 0 ID=cds-RUP92233.1;Parent=gene-D8M19_08200;Dbxref=NCBI_GP:RUP92233.1;Name=RUP92233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120930.1;locus_tag=D8M19_08200;product=pyruvate dehydrogenase;protein_id=RUP92233.1;transl_table=11 RBLY01000007.1 Genbank gene 13555 15879 . - . ID=gene-D8M19_08205;Name=D8M19_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08205 RBLY01000007.1 Protein Homology CDS 13555 15879 . - 0 ID=cds-RUP92234.1;Parent=gene-D8M19_08205;Dbxref=NCBI_GP:RUP92234.1;Name=RUP92234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013887871.1;locus_tag=D8M19_08205;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=RUP92234.1;transl_table=11 RBLY01000007.1 Genbank gene 16030 16106 . + . ID=gene-D8M19_08210;Name=D8M19_08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_08210 RBLY01000007.1 tRNAscan-SE tRNA 16030 16106 . + . ID=rna-D8M19_08210;Parent=gene-D8M19_08210;anticodon=(pos:16064..16066);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08210;product=tRNA-Pro RBLY01000007.1 tRNAscan-SE exon 16030 16106 . + . ID=exon-D8M19_08210-1;Parent=rna-D8M19_08210;anticodon=(pos:16064..16066);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08210;product=tRNA-Pro RBLY01000007.1 Genbank gene 16196 17584 . + . ID=gene-D8M19_08215;Name=D8M19_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08215 RBLY01000007.1 Protein Homology CDS 16196 17584 . + 0 ID=cds-RUP92235.1;Parent=gene-D8M19_08215;Dbxref=NCBI_GP:RUP92235.1;Name=RUP92235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120932.1;locus_tag=D8M19_08215;product=trigger factor;protein_id=RUP92235.1;transl_table=11 RBLY01000007.1 Genbank gene 17783 18385 . + . ID=gene-D8M19_08220;Name=D8M19_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08220 RBLY01000007.1 Protein Homology CDS 17783 18385 . + 0 ID=cds-RUP92236.1;Parent=gene-D8M19_08220;Dbxref=NCBI_GP:RUP92236.1;Name=RUP92236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821938.1;locus_tag=D8M19_08220;product=ATP-dependent Clp protease proteolytic subunit;protein_id=RUP92236.1;transl_table=11 RBLY01000007.1 Genbank gene 18424 19053 . + . ID=gene-D8M19_08225;Name=D8M19_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08225 RBLY01000007.1 Protein Homology CDS 18424 19053 . + 0 ID=cds-RUP92237.1;Parent=gene-D8M19_08225;Dbxref=NCBI_GP:RUP92237.1;Name=RUP92237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120935.1;locus_tag=D8M19_08225;product=ATP-dependent Clp protease proteolytic subunit;protein_id=RUP92237.1;transl_table=11 RBLY01000007.1 Genbank gene 19389 20060 . + . ID=gene-D8M19_08230;Name=D8M19_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08230 RBLY01000007.1 Protein Homology CDS 19389 20060 . + 0 ID=cds-RUP92238.1;Parent=gene-D8M19_08230;Dbxref=NCBI_GP:RUP92238.1;Name=RUP92238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120936.1;locus_tag=D8M19_08230;product=DNA-binding response regulator;protein_id=RUP92238.1;transl_table=11 RBLY01000007.1 Genbank gene 20136 22538 . - . ID=gene-D8M19_08235;Name=D8M19_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08235 RBLY01000007.1 Protein Homology CDS 20136 22538 . - 0 ID=cds-RUP92239.1;Parent=gene-D8M19_08235;Dbxref=NCBI_GP:RUP92239.1;Name=RUP92239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13581.4;locus_tag=D8M19_08235;product=hypothetical protein;protein_id=RUP92239.1;transl_table=11 RBLY01000007.1 Genbank gene 22717 24051 . + . ID=gene-D8M19_08240;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=D8M19_08240 RBLY01000007.1 Protein Homology CDS 22717 24051 . + 0 ID=cds-RUP92240.1;Parent=gene-D8M19_08240;Dbxref=NCBI_GP:RUP92240.1;Name=RUP92240.1;gbkey=CDS;gene=clpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190911.1;locus_tag=D8M19_08240;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=RUP92240.1;transl_table=11 RBLY01000007.1 Genbank gene 24158 24889 . - . ID=gene-D8M19_08245;Name=D8M19_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08245 RBLY01000007.1 GeneMarkS+ CDS 24158 24889 . - 0 ID=cds-RUP92241.1;Parent=gene-D8M19_08245;Dbxref=NCBI_GP:RUP92241.1;Name=RUP92241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08245;product=hypothetical protein;protein_id=RUP92241.1;transl_table=11 RBLY01000007.1 Genbank gene 24882 25775 . - . ID=gene-D8M19_08250;Name=D8M19_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08250 RBLY01000007.1 Protein Homology CDS 24882 25775 . - 0 ID=cds-RUP92242.1;Parent=gene-D8M19_08250;Dbxref=NCBI_GP:RUP92242.1;Name=RUP92242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120940.1;locus_tag=D8M19_08250;product=pantoate--beta-alanine ligase;protein_id=RUP92242.1;transl_table=11 RBLY01000007.1 Genbank gene 25776 26606 . - . ID=gene-D8M19_08255;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=D8M19_08255 RBLY01000007.1 Protein Homology CDS 25776 26606 . - 0 ID=cds-RUP92243.1;Parent=gene-D8M19_08255;Dbxref=NCBI_GP:RUP92243.1;Name=RUP92243.1;gbkey=CDS;gene=panB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120941.1;locus_tag=D8M19_08255;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=RUP92243.1;transl_table=11 RBLY01000007.1 Genbank gene 26711 29458 . + . ID=gene-D8M19_08260;Name=D8M19_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08260 RBLY01000007.1 Protein Homology CDS 26711 29458 . + 0 ID=cds-RUP92244.1;Parent=gene-D8M19_08260;Dbxref=NCBI_GP:RUP92244.1;Name=RUP92244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120942.1;locus_tag=D8M19_08260;product=valine--tRNA ligase;protein_id=RUP92244.1;transl_table=11 RBLY01000007.1 Genbank gene 29584 31056 . + . ID=gene-D8M19_08265;Name=D8M19_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08265 RBLY01000007.1 Protein Homology CDS 29584 31056 . + 0 ID=cds-RUP92333.1;Parent=gene-D8M19_08265;Dbxref=NCBI_GP:RUP92333.1;Name=RUP92333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014800784.1;locus_tag=D8M19_08265;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=RUP92333.1;transl_table=11 RBLY01000007.1 Genbank gene 31053 31508 . + . ID=gene-D8M19_08270;Name=D8M19_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08270 RBLY01000007.1 Protein Homology CDS 31053 31508 . + 0 ID=cds-RUP92245.1;Parent=gene-D8M19_08270;Dbxref=NCBI_GP:RUP92245.1;Name=RUP92245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015651865.1;locus_tag=D8M19_08270;product=DUF4233 domain-containing protein;protein_id=RUP92245.1;transl_table=11 RBLY01000007.1 Genbank gene 31602 32012 . + . ID=gene-D8M19_08275;Name=D8M19_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08275 RBLY01000007.1 Protein Homology CDS 31602 32012 . + 0 ID=cds-RUP92246.1;Parent=gene-D8M19_08275;Dbxref=NCBI_GP:RUP92246.1;Name=RUP92246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859294.1;locus_tag=D8M19_08275;product=nucleoside-diphosphate kinase;protein_id=RUP92246.1;transl_table=11 RBLY01000007.1 Genbank gene 32316 32975 . - . ID=gene-D8M19_08280;Name=D8M19_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08280 RBLY01000007.1 GeneMarkS+ CDS 32316 32975 . - 0 ID=cds-RUP92247.1;Parent=gene-D8M19_08280;Dbxref=NCBI_GP:RUP92247.1;Name=RUP92247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08280;product=hypothetical protein;protein_id=RUP92247.1;transl_table=11 RBLY01000007.1 Genbank gene 33270 36968 . + . ID=gene-D8M19_08285;Name=D8M19_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08285 RBLY01000007.1 Protein Homology CDS 33270 36968 . + 0 ID=cds-RUP92248.1;Parent=gene-D8M19_08285;Dbxref=NCBI_GP:RUP92248.1;Name=RUP92248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296397.1;locus_tag=D8M19_08285;product=Rne/Rng family ribonuclease;protein_id=RUP92248.1;transl_table=11 RBLY01000007.1 Genbank gene 37211 37516 . + . ID=gene-D8M19_08290;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=D8M19_08290 RBLY01000007.1 Protein Homology CDS 37211 37516 . + 0 ID=cds-RUP92249.1;Parent=gene-D8M19_08290;Dbxref=NCBI_GP:RUP92249.1;Name=RUP92249.1;gbkey=CDS;gene=rplU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006064165.1;locus_tag=D8M19_08290;product=50S ribosomal protein L21;protein_id=RUP92249.1;transl_table=11 RBLY01000007.1 Genbank gene 37537 37815 . + . ID=gene-D8M19_08295;Name=D8M19_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08295 RBLY01000007.1 Protein Homology CDS 37537 37815 . + 0 ID=cds-RUP92250.1;Parent=gene-D8M19_08295;Dbxref=NCBI_GP:RUP92250.1;Name=RUP92250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190882.1;locus_tag=D8M19_08295;product=50S ribosomal protein L27;protein_id=RUP92250.1;transl_table=11 RBLY01000007.1 Genbank gene 37947 39476 . + . ID=gene-D8M19_08300;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=D8M19_08300 RBLY01000007.1 Protein Homology CDS 37947 39476 . + 0 ID=cds-RUP92251.1;Parent=gene-D8M19_08300;Dbxref=NCBI_GP:RUP92251.1;Name=RUP92251.1;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329223.1;locus_tag=D8M19_08300;product=GTPase ObgE;protein_id=RUP92251.1;transl_table=11 RBLY01000007.1 Genbank gene 39533 40771 . + . ID=gene-D8M19_08305;Name=D8M19_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08305 RBLY01000007.1 Protein Homology CDS 39533 40771 . + 0 ID=cds-RUP92252.1;Parent=gene-D8M19_08305;Dbxref=NCBI_GP:RUP92252.1;Name=RUP92252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120951.1;locus_tag=D8M19_08305;product=glutamate 5-kinase;protein_id=RUP92252.1;transl_table=11 RBLY01000007.1 Genbank gene 40846 41754 . + . ID=gene-D8M19_08310;Name=D8M19_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08310 RBLY01000007.1 Protein Homology CDS 40846 41754 . + 0 ID=cds-RUP92253.1;Parent=gene-D8M19_08310;Dbxref=NCBI_GP:RUP92253.1;Name=RUP92253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120952.1;locus_tag=D8M19_08310;product=hypothetical protein;protein_id=RUP92253.1;transl_table=11 RBLY01000007.1 Genbank gene 41850 43151 . + . ID=gene-D8M19_08315;Name=D8M19_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08315 RBLY01000007.1 Protein Homology CDS 41850 43151 . + 0 ID=cds-RUP92254.1;Parent=gene-D8M19_08315;Dbxref=NCBI_GP:RUP92254.1;Name=RUP92254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821957.1;locus_tag=D8M19_08315;product=glutamate-5-semialdehyde dehydrogenase;protein_id=RUP92254.1;transl_table=11 RBLY01000007.1 Genbank gene 43205 43834 . + . ID=gene-D8M19_08320;Name=D8M19_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08320 RBLY01000007.1 GeneMarkS+ CDS 43205 43834 . + 0 ID=cds-RUP92255.1;Parent=gene-D8M19_08320;Dbxref=NCBI_GP:RUP92255.1;Name=RUP92255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08320;product=hypothetical protein;protein_id=RUP92255.1;transl_table=11 RBLY01000007.1 Genbank gene 43866 44471 . + . ID=gene-D8M19_08325;Name=D8M19_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08325 RBLY01000007.1 Protein Homology CDS 43866 44471 . + 0 ID=cds-RUP92334.1;Parent=gene-D8M19_08325;Dbxref=NCBI_GP:RUP92334.1;Name=RUP92334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006064134.1;locus_tag=D8M19_08325;product=nicotinate-nucleotide adenylyltransferase;protein_id=RUP92334.1;transl_table=11 RBLY01000007.1 Genbank gene 44669 45127 . + . ID=gene-D8M19_08330;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=D8M19_08330 RBLY01000007.1 Protein Homology CDS 44669 45127 . + 0 ID=cds-RUP92256.1;Parent=gene-D8M19_08330;Dbxref=NCBI_GP:RUP92256.1;Name=RUP92256.1;gbkey=CDS;gene=rsfS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120956.1;locus_tag=D8M19_08330;product=ribosome silencing factor;protein_id=RUP92256.1;transl_table=11 RBLY01000007.1 Genbank gene 45124 45801 . + . ID=gene-D8M19_08335;Name=D8M19_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08335 RBLY01000007.1 Protein Homology CDS 45124 45801 . + 0 ID=cds-RUP92257.1;Parent=gene-D8M19_08335;Dbxref=NCBI_GP:RUP92257.1;Name=RUP92257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120957.1;locus_tag=D8M19_08335;product=histidine phosphatase family protein;protein_id=RUP92257.1;transl_table=11 RBLY01000007.1 Genbank gene 45802 46611 . + . ID=gene-D8M19_08340;Name=D8M19_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08340 RBLY01000007.1 Protein Homology CDS 45802 46611 . + 0 ID=cds-RUP92258.1;Parent=gene-D8M19_08340;Dbxref=NCBI_GP:RUP92258.1;Name=RUP92258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120958.1;locus_tag=D8M19_08340;product=DegV family protein;protein_id=RUP92258.1;transl_table=11 RBLY01000007.1 Genbank gene 46848 47627 . + . ID=gene-D8M19_08345;Name=D8M19_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08345 RBLY01000007.1 Protein Homology CDS 46848 47627 . + 0 ID=cds-RUP92335.1;Parent=gene-D8M19_08345;Dbxref=NCBI_GP:RUP92335.1;Name=RUP92335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277997.1;locus_tag=D8M19_08345;product=ComEA family DNA-binding protein;protein_id=RUP92335.1;transl_table=11 RBLY01000007.1 Genbank gene 47635 49365 . + . ID=gene-D8M19_08350;Name=D8M19_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08350 RBLY01000007.1 Protein Homology CDS 47635 49365 . + 0 ID=cds-RUP92259.1;Parent=gene-D8M19_08350;Dbxref=NCBI_GP:RUP92259.1;Name=RUP92259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03772.14;locus_tag=D8M19_08350;product=ComEC/Rec2 family competence protein;protein_id=RUP92259.1;transl_table=11 RBLY01000007.1 Genbank gene 49385 50341 . + . ID=gene-D8M19_08355;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=D8M19_08355 RBLY01000007.1 Protein Homology CDS 49385 50341 . + 0 ID=cds-RUP92260.1;Parent=gene-D8M19_08355;Dbxref=NCBI_GP:RUP92260.1;Name=RUP92260.1;gbkey=CDS;gene=holA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120961.1;locus_tag=D8M19_08355;product=DNA polymerase III subunit delta;protein_id=RUP92260.1;transl_table=11 RBLY01000007.1 Genbank gene 50354 50785 . + . ID=gene-D8M19_08360;Name=D8M19_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08360 RBLY01000007.1 Protein Homology CDS 50354 50785 . + 0 ID=cds-RUP92261.1;Parent=gene-D8M19_08360;Dbxref=NCBI_GP:RUP92261.1;Name=RUP92261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120962.1;locus_tag=D8M19_08360;product=ankyrin repeat domain-containing protein;protein_id=RUP92261.1;transl_table=11 RBLY01000007.1 Genbank gene 50782 51432 . + . ID=gene-D8M19_08365;Name=D8M19_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08365 RBLY01000007.1 Protein Homology CDS 50782 51432 . + 0 ID=cds-RUP92262.1;Parent=gene-D8M19_08365;Dbxref=NCBI_GP:RUP92262.1;Name=RUP92262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120963.1;locus_tag=D8M19_08365;product=LysE family translocator;protein_id=RUP92262.1;transl_table=11 RBLY01000007.1 Genbank gene 53280 53546 . - . ID=gene-D8M19_08370;Name=D8M19_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08370 RBLY01000007.1 Protein Homology CDS 53280 53546 . - 0 ID=cds-RUP92263.1;Parent=gene-D8M19_08370;Dbxref=NCBI_GP:RUP92263.1;Name=RUP92263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016422323.1;locus_tag=D8M19_08370;product=30S ribosomal protein S20;protein_id=RUP92263.1;transl_table=11 RBLY01000007.1 Genbank gene 53818 54354 . - . ID=gene-D8M19_08375;Name=D8M19_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08375 RBLY01000007.1 Protein Homology CDS 53818 54354 . - 0 ID=cds-RUP92264.1;Parent=gene-D8M19_08375;Dbxref=NCBI_GP:RUP92264.1;Name=RUP92264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120968.1;locus_tag=D8M19_08375;product=hypothetical protein;protein_id=RUP92264.1;transl_table=11 RBLY01000007.1 Genbank gene 54459 56306 . + . ID=gene-D8M19_08380;Name=D8M19_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08380 RBLY01000007.1 Protein Homology CDS 54459 56306 . + 0 ID=cds-RUP92265.1;Parent=gene-D8M19_08380;Dbxref=NCBI_GP:RUP92265.1;Name=RUP92265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849366.1;locus_tag=D8M19_08380;product=elongation factor 4;protein_id=RUP92265.1;transl_table=11 RBLY01000007.1 Genbank gene 56517 57983 . + . ID=gene-D8M19_08385;Name=D8M19_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08385 RBLY01000007.1 Protein Homology CDS 56517 57983 . + 0 ID=cds-RUP92266.1;Parent=gene-D8M19_08385;Dbxref=NCBI_GP:RUP92266.1;Name=RUP92266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120970.1;locus_tag=D8M19_08385;product=amidohydrolase;protein_id=RUP92266.1;transl_table=11 RBLY01000007.1 Genbank gene 58267 59148 . + . ID=gene-D8M19_08390;Name=D8M19_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08390 RBLY01000007.1 Protein Homology CDS 58267 59148 . + 0 ID=cds-RUP92267.1;Parent=gene-D8M19_08390;Dbxref=NCBI_GP:RUP92267.1;Name=RUP92267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03328.12;locus_tag=D8M19_08390;product=CoA ester lyase;protein_id=RUP92267.1;transl_table=11 RBLY01000007.1 Genbank gene 59249 59893 . - . ID=gene-D8M19_08395;Name=D8M19_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08395 RBLY01000007.1 Protein Homology CDS 59249 59893 . - 0 ID=cds-RUP92268.1;Parent=gene-D8M19_08395;Dbxref=NCBI_GP:RUP92268.1;Name=RUP92268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189326.1;locus_tag=D8M19_08395;product=TetR/AcrR family transcriptional regulator;protein_id=RUP92268.1;transl_table=11 RBLY01000007.1 Genbank gene 60061 61236 . + . ID=gene-D8M19_08400;Name=D8M19_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08400 RBLY01000007.1 Protein Homology CDS 60061 61236 . + 0 ID=cds-RUP92269.1;Parent=gene-D8M19_08400;Dbxref=NCBI_GP:RUP92269.1;Name=RUP92269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189325.1;locus_tag=D8M19_08400;product=acyl-CoA dehydrogenase;protein_id=RUP92269.1;transl_table=11 RBLY01000007.1 Genbank gene 61340 63631 . - . ID=gene-D8M19_08405;Name=D8M19_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08405 RBLY01000007.1 Protein Homology CDS 61340 63631 . - 0 ID=cds-RUP92270.1;Parent=gene-D8M19_08405;Dbxref=NCBI_GP:RUP92270.1;Name=RUP92270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120976.1;locus_tag=D8M19_08405;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=RUP92270.1;transl_table=11 RBLY01000007.1 Genbank gene 63634 64812 . - . ID=gene-D8M19_08410;Name=D8M19_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08410 RBLY01000007.1 Protein Homology CDS 63634 64812 . - 0 ID=cds-RUP92271.1;Parent=gene-D8M19_08410;Dbxref=NCBI_GP:RUP92271.1;Name=RUP92271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120977.1;locus_tag=D8M19_08410;product=acetyl-CoA C-acyltransferase;protein_id=RUP92271.1;transl_table=11 RBLY01000007.1 Genbank gene 64941 65651 . - . ID=gene-D8M19_08415;Name=D8M19_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08415 RBLY01000007.1 Protein Homology CDS 64941 65651 . - 0 ID=cds-RUP92272.1;Parent=gene-D8M19_08415;Dbxref=NCBI_GP:RUP92272.1;Name=RUP92272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120978.1;locus_tag=D8M19_08415;product=TIGR03089 family protein;protein_id=RUP92272.1;transl_table=11 RBLY01000007.1 Genbank gene 65742 67337 . - . ID=gene-D8M19_08420;Name=D8M19_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08420 RBLY01000007.1 Protein Homology CDS 65742 67337 . - 0 ID=cds-RUP92273.1;Parent=gene-D8M19_08420;Dbxref=NCBI_GP:RUP92273.1;Name=RUP92273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769563.1;locus_tag=D8M19_08420;product=LytR family transcriptional regulator;protein_id=RUP92273.1;transl_table=11 RBLY01000007.1 Genbank gene 67436 68293 . + . ID=gene-D8M19_08425;Name=D8M19_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08425 RBLY01000007.1 Protein Homology CDS 67436 68293 . + 0 ID=cds-RUP92274.1;Parent=gene-D8M19_08425;Dbxref=NCBI_GP:RUP92274.1;Name=RUP92274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120980.1;locus_tag=D8M19_08425;product=glycosyltransferase family 2 protein;protein_id=RUP92274.1;transl_table=11 RBLY01000007.1 Genbank gene 68503 69573 . + . ID=gene-D8M19_08430;Name=D8M19_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08430 RBLY01000007.1 Protein Homology CDS 68503 69573 . + 0 ID=cds-RUP92275.1;Parent=gene-D8M19_08430;Dbxref=NCBI_GP:RUP92275.1;Name=RUP92275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120981.1;locus_tag=D8M19_08430;product=NDP-sugar synthase;protein_id=RUP92275.1;transl_table=11 RBLY01000007.1 Genbank gene 69884 70180 . + . ID=gene-D8M19_08435;Name=D8M19_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08435 RBLY01000007.1 Protein Homology CDS 69884 70180 . + 0 ID=cds-RUP92336.1;Parent=gene-D8M19_08435;Dbxref=NCBI_GP:RUP92336.1;Name=RUP92336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018296130.1;locus_tag=D8M19_08435;product=WhiB family transcriptional regulator;protein_id=RUP92336.1;transl_table=11 RBLY01000007.1 Genbank gene 70220 70693 . - . ID=gene-D8M19_08440;Name=D8M19_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08440 RBLY01000007.1 Protein Homology CDS 70220 70693 . - 0 ID=cds-RUP92276.1;Parent=gene-D8M19_08440;Dbxref=NCBI_GP:RUP92276.1;Name=RUP92276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821976.1;locus_tag=D8M19_08440;product=metallopeptidase family protein;protein_id=RUP92276.1;transl_table=11 RBLY01000007.1 Genbank gene 70801 71583 . + . ID=gene-D8M19_08445;Name=D8M19_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08445 RBLY01000007.1 Protein Homology CDS 70801 71583 . + 0 ID=cds-RUP92277.1;Parent=gene-D8M19_08445;Dbxref=NCBI_GP:RUP92277.1;Name=RUP92277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650559.1;locus_tag=D8M19_08445;product=DUF3499 domain-containing protein;protein_id=RUP92277.1;transl_table=11 RBLY01000007.1 Genbank gene 71635 73017 . + . ID=gene-D8M19_08450;Name=D8M19_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08450 RBLY01000007.1 Protein Homology CDS 71635 73017 . + 0 ID=cds-RUP92278.1;Parent=gene-D8M19_08450;Dbxref=NCBI_GP:RUP92278.1;Name=RUP92278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120985.1;locus_tag=D8M19_08450;product=phosphomannomutase/phosphoglucomutase;protein_id=RUP92278.1;transl_table=11 RBLY01000007.1 Genbank gene 73126 74391 . + . ID=gene-D8M19_08455;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=D8M19_08455 RBLY01000007.1 Protein Homology CDS 73126 74391 . + 0 ID=cds-RUP92279.1;Parent=gene-D8M19_08455;Dbxref=NCBI_GP:RUP92279.1;Name=RUP92279.1;gbkey=CDS;gene=manA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189199.1;locus_tag=D8M19_08455;product=mannose-6-phosphate isomerase%2C class I;protein_id=RUP92279.1;transl_table=11 RBLY01000007.1 Genbank gene 74474 75490 . - . ID=gene-D8M19_08460;Name=D8M19_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08460 RBLY01000007.1 GeneMarkS+ CDS 74474 75490 . - 0 ID=cds-RUP92280.1;Parent=gene-D8M19_08460;Dbxref=NCBI_GP:RUP92280.1;Name=RUP92280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08460;product=hypothetical protein;protein_id=RUP92280.1;transl_table=11 RBLY01000007.1 Genbank gene 75831 76235 . + . ID=gene-D8M19_08465;Name=D8M19_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08465 RBLY01000007.1 Protein Homology CDS 75831 76235 . + 0 ID=cds-RUP92281.1;Parent=gene-D8M19_08465;Dbxref=NCBI_GP:RUP92281.1;Name=RUP92281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013910950.1;locus_tag=D8M19_08465;product=hypothetical protein;protein_id=RUP92281.1;transl_table=11 RBLY01000007.1 Genbank gene 76235 76876 . + . ID=gene-D8M19_08470;Name=D8M19_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08470 RBLY01000007.1 Protein Homology CDS 76235 76876 . + 0 ID=cds-RUP92282.1;Parent=gene-D8M19_08470;Dbxref=NCBI_GP:RUP92282.1;Name=RUP92282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189194.1;locus_tag=D8M19_08470;product=dTMP kinase;protein_id=RUP92282.1;transl_table=11 RBLY01000007.1 Genbank gene 76906 77610 . + . ID=gene-D8M19_08475;Name=D8M19_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08475 RBLY01000007.1 Protein Homology CDS 76906 77610 . + 0 ID=cds-RUP92283.1;Parent=gene-D8M19_08475;Dbxref=NCBI_GP:RUP92283.1;Name=RUP92283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120990.1;locus_tag=D8M19_08475;product=DNA-binding response regulator;protein_id=RUP92283.1;transl_table=11 RBLY01000007.1 Genbank pseudogene 77770 79239 . + . ID=gene-D8M19_08480;Name=D8M19_08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_08480;pseudo=true RBLY01000007.1 Protein Homology CDS 77770 79239 . + 0 ID=cds-D8M19_08480;Parent=gene-D8M19_08480;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839626.1;locus_tag=D8M19_08480;product=sensor histidine kinase;pseudo=true;transl_table=11 RBLY01000007.1 Genbank gene 79427 81175 . + . ID=gene-D8M19_08485;Name=lpqB;gbkey=Gene;gene=lpqB;gene_biotype=protein_coding;locus_tag=D8M19_08485 RBLY01000007.1 Protein Homology CDS 79427 81175 . + 0 ID=cds-RUP92337.1;Parent=gene-D8M19_08485;Dbxref=NCBI_GP:RUP92337.1;Name=RUP92337.1;gbkey=CDS;gene=lpqB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189190.1;locus_tag=D8M19_08485;product=MtrAB system accessory protein LpqB;protein_id=RUP92337.1;transl_table=11 RBLY01000007.1 Genbank gene 81201 81848 . + . ID=gene-D8M19_08490;Name=D8M19_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08490 RBLY01000007.1 Protein Homology CDS 81201 81848 . + 0 ID=cds-RUP92284.1;Parent=gene-D8M19_08490;Dbxref=NCBI_GP:RUP92284.1;Name=RUP92284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286089.1;locus_tag=D8M19_08490;product=ComF family protein;protein_id=RUP92284.1;transl_table=11 RBLY01000007.1 Genbank gene 81985 82662 . + . ID=gene-D8M19_08495;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=D8M19_08495 RBLY01000007.1 Protein Homology CDS 81985 82662 . + 0 ID=cds-RUP92285.1;Parent=gene-D8M19_08495;Dbxref=NCBI_GP:RUP92285.1;Name=RUP92285.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120994.1;locus_tag=D8M19_08495;product=ribosome-associated translation inhibitor RaiA;protein_id=RUP92285.1;transl_table=11 RBLY01000007.1 Genbank gene 82811 85429 . + . ID=gene-D8M19_08500;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=D8M19_08500 RBLY01000007.1 Protein Homology CDS 82811 85429 . + 0 ID=cds-RUP92286.1;Parent=gene-D8M19_08500;Dbxref=NCBI_GP:RUP92286.1;Name=RUP92286.1;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120995.1;locus_tag=D8M19_08500;product=preprotein translocase subunit SecA;protein_id=RUP92286.1;transl_table=11 RBLY01000007.1 Genbank gene 85426 85851 . - . ID=gene-D8M19_08505;Name=D8M19_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08505 RBLY01000007.1 GeneMarkS+ CDS 85426 85851 . - 0 ID=cds-RUP92287.1;Parent=gene-D8M19_08505;Dbxref=NCBI_GP:RUP92287.1;Name=RUP92287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08505;product=hypothetical protein;protein_id=RUP92287.1;transl_table=11 RBLY01000007.1 Genbank gene 86002 86412 . + . ID=gene-D8M19_08510;Name=D8M19_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08510 RBLY01000007.1 Protein Homology CDS 86002 86412 . + 0 ID=cds-RUP92288.1;Parent=gene-D8M19_08510;Dbxref=NCBI_GP:RUP92288.1;Name=RUP92288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528174.1;locus_tag=D8M19_08510;product=HAD family hydrolase;protein_id=RUP92288.1;transl_table=11 RBLY01000007.1 Genbank gene 86414 86920 . + . ID=gene-D8M19_08515;Name=D8M19_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08515 RBLY01000007.1 Protein Homology CDS 86414 86920 . + 0 ID=cds-RUP92289.1;Parent=gene-D8M19_08515;Dbxref=NCBI_GP:RUP92289.1;Name=RUP92289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120998.1;locus_tag=D8M19_08515;product=hypothetical protein;protein_id=RUP92289.1;transl_table=11 RBLY01000007.1 Genbank gene 86917 87951 . - . ID=gene-D8M19_08520;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=D8M19_08520 RBLY01000007.1 Protein Homology CDS 86917 87951 . - 0 ID=cds-RUP92290.1;Parent=gene-D8M19_08520;Dbxref=NCBI_GP:RUP92290.1;Name=RUP92290.1;gbkey=CDS;gene=rsgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322389.1;locus_tag=D8M19_08520;product=ribosome small subunit-dependent GTPase A;protein_id=RUP92290.1;transl_table=11 RBLY01000007.1 Genbank gene 87952 89220 . - . ID=gene-D8M19_08525;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=D8M19_08525 RBLY01000007.1 Protein Homology CDS 87952 89220 . - 0 ID=cds-RUP92291.1;Parent=gene-D8M19_08525;Dbxref=NCBI_GP:RUP92291.1;Name=RUP92291.1;gbkey=CDS;gene=aroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121000.1;locus_tag=D8M19_08525;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=RUP92291.1;transl_table=11 RBLY01000007.1 Genbank gene 89303 90040 . + . ID=gene-D8M19_08530;Name=D8M19_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08530 RBLY01000007.1 Protein Homology CDS 89303 90040 . + 0 ID=cds-RUP92292.1;Parent=gene-D8M19_08530;Dbxref=NCBI_GP:RUP92292.1;Name=RUP92292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121001.1;locus_tag=D8M19_08530;product=sigma-70 family RNA polymerase sigma factor;protein_id=RUP92292.1;transl_table=11 RBLY01000007.1 Genbank gene 90181 90474 . + . ID=gene-D8M19_08535;Name=D8M19_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08535 RBLY01000007.1 GeneMarkS+ CDS 90181 90474 . + 0 ID=cds-RUP92293.1;Parent=gene-D8M19_08535;Dbxref=NCBI_GP:RUP92293.1;Name=RUP92293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08535;product=hypothetical protein;protein_id=RUP92293.1;transl_table=11 RBLY01000007.1 Genbank gene 90861 91121 . - . ID=gene-D8M19_08540;Name=D8M19_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08540 RBLY01000007.1 Protein Homology CDS 90861 91121 . - 0 ID=cds-RUP92294.1;Parent=gene-D8M19_08540;Dbxref=NCBI_GP:RUP92294.1;Name=RUP92294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121003.1;locus_tag=D8M19_08540;product=WhiB family transcriptional regulator;protein_id=RUP92294.1;transl_table=11 RBLY01000007.1 Genbank gene 91498 92001 . + . ID=gene-D8M19_08545;Name=D8M19_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08545 RBLY01000007.1 GeneMarkS+ CDS 91498 92001 . + 0 ID=cds-RUP92295.1;Parent=gene-D8M19_08545;Dbxref=NCBI_GP:RUP92295.1;Name=RUP92295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08545;product=hypothetical protein;protein_id=RUP92295.1;transl_table=11 RBLY01000007.1 Genbank gene 92091 93470 . - . ID=gene-D8M19_08550;Name=D8M19_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08550 RBLY01000007.1 Protein Homology CDS 92091 93470 . - 0 ID=cds-RUP92296.1;Parent=gene-D8M19_08550;Dbxref=NCBI_GP:RUP92296.1;Name=RUP92296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121005.1;locus_tag=D8M19_08550;product=hypothetical protein;protein_id=RUP92296.1;transl_table=11 RBLY01000007.1 Genbank gene 93488 94837 . - . ID=gene-D8M19_08555;Name=D8M19_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08555 RBLY01000007.1 Protein Homology CDS 93488 94837 . - 0 ID=cds-RUP92297.1;Parent=gene-D8M19_08555;Dbxref=NCBI_GP:RUP92297.1;Name=RUP92297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121006.1;locus_tag=D8M19_08555;product=DEAD/DEAH box helicase;protein_id=RUP92297.1;transl_table=11 RBLY01000007.1 Genbank gene 94921 95148 . + . ID=gene-D8M19_08560;Name=D8M19_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08560 RBLY01000007.1 Protein Homology CDS 94921 95148 . + 0 ID=cds-RUP92298.1;Parent=gene-D8M19_08560;Dbxref=NCBI_GP:RUP92298.1;Name=RUP92298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121007.1;locus_tag=D8M19_08560;product=DUF3107 domain-containing protein;protein_id=RUP92298.1;transl_table=11 RBLY01000007.1 Genbank gene 95295 96263 . + . ID=gene-D8M19_08565;Name=D8M19_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08565 RBLY01000007.1 Protein Homology CDS 95295 96263 . + 0 ID=cds-RUP92299.1;Parent=gene-D8M19_08565;Dbxref=NCBI_GP:RUP92299.1;Name=RUP92299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121008.1;locus_tag=D8M19_08565;product=DUF3152 domain-containing protein;protein_id=RUP92299.1;transl_table=11 RBLY01000007.1 Genbank gene 96272 97027 . + . ID=gene-D8M19_08570;Name=D8M19_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08570 RBLY01000007.1 Protein Homology CDS 96272 97027 . + 0 ID=cds-RUP92300.1;Parent=gene-D8M19_08570;Dbxref=NCBI_GP:RUP92300.1;Name=RUP92300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322366.1;locus_tag=D8M19_08570;product=hypothetical protein;protein_id=RUP92300.1;transl_table=11 RBLY01000007.1 Genbank gene 97040 100216 . + . ID=gene-D8M19_08575;Name=D8M19_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08575 RBLY01000007.1 Protein Homology CDS 97040 100216 . + 0 ID=cds-RUP92301.1;Parent=gene-D8M19_08575;Dbxref=NCBI_GP:RUP92301.1;Name=RUP92301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322365.1;locus_tag=D8M19_08575;product=ATP-dependent helicase;protein_id=RUP92301.1;transl_table=11 RBLY01000007.1 Genbank gene 100209 103643 . + . ID=gene-D8M19_08580;Name=D8M19_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08580 RBLY01000007.1 Protein Homology CDS 100209 103643 . + 0 ID=cds-RUP92302.1;Parent=gene-D8M19_08580;Dbxref=NCBI_GP:RUP92302.1;Name=RUP92302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121011.1;locus_tag=D8M19_08580;product=ATP-dependent helicase;protein_id=RUP92302.1;transl_table=11 RBLY01000007.1 Genbank gene 103653 104894 . + . ID=gene-D8M19_08585;Name=D8M19_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08585 RBLY01000007.1 Protein Homology CDS 103653 104894 . + 0 ID=cds-RUP92303.1;Parent=gene-D8M19_08585;Dbxref=NCBI_GP:RUP92303.1;Name=RUP92303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121012.1;locus_tag=D8M19_08585;product=Ion channel protein;protein_id=RUP92303.1;transl_table=11 RBLY01000007.1 Genbank gene 104906 106954 . + . ID=gene-D8M19_08590;Name=D8M19_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08590 RBLY01000007.1 Protein Homology CDS 104906 106954 . + 0 ID=cds-RUP92304.1;Parent=gene-D8M19_08590;Dbxref=NCBI_GP:RUP92304.1;Name=RUP92304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121013.1;locus_tag=D8M19_08590;product=ATP-dependent DNA helicase UvrD2;protein_id=RUP92304.1;transl_table=11 RBLY01000007.1 Genbank gene 106881 107864 . - . ID=gene-D8M19_08595;Name=D8M19_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08595 RBLY01000007.1 GeneMarkS+ CDS 106881 107864 . - 0 ID=cds-RUP92305.1;Parent=gene-D8M19_08595;Dbxref=NCBI_GP:RUP92305.1;Name=RUP92305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08595;product=hypothetical protein;protein_id=RUP92305.1;transl_table=11 RBLY01000007.1 Genbank gene 107905 109323 . - . ID=gene-D8M19_08600;Name=D8M19_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08600 RBLY01000007.1 Protein Homology CDS 107905 109323 . - 0 ID=cds-RUP92306.1;Parent=gene-D8M19_08600;Dbxref=NCBI_GP:RUP92306.1;Name=RUP92306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189145.1;locus_tag=D8M19_08600;product=hydrolase;protein_id=RUP92306.1;transl_table=11 RBLY01000007.1 Genbank gene 109522 110526 . + . ID=gene-D8M19_08605;Name=D8M19_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08605 RBLY01000007.1 Protein Homology CDS 109522 110526 . + 0 ID=cds-RUP92338.1;Parent=gene-D8M19_08605;Dbxref=NCBI_GP:RUP92338.1;Name=RUP92338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400209.1;locus_tag=D8M19_08605;product=PDZ domain-containing protein;protein_id=RUP92338.1;transl_table=11 RBLY01000007.1 Genbank gene 110553 110882 . - . ID=gene-D8M19_08610;Name=D8M19_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08610 RBLY01000007.1 GeneMarkS+ CDS 110553 110882 . - 0 ID=cds-RUP92307.1;Parent=gene-D8M19_08610;Dbxref=NCBI_GP:RUP92307.1;Name=RUP92307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08610;product=hypothetical protein;protein_id=RUP92307.1;transl_table=11 RBLY01000007.1 Genbank gene 110935 111342 . + . ID=gene-D8M19_08615;Name=D8M19_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08615 RBLY01000007.1 GeneMarkS+ CDS 110935 111342 . + 0 ID=cds-RUP92308.1;Parent=gene-D8M19_08615;Dbxref=NCBI_GP:RUP92308.1;Name=RUP92308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08615;product=hypothetical protein;protein_id=RUP92308.1;transl_table=11 RBLY01000007.1 Genbank gene 111354 111980 . - . ID=gene-D8M19_08620;Name=D8M19_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08620 RBLY01000007.1 Protein Homology CDS 111354 111980 . - 0 ID=cds-RUP92309.1;Parent=gene-D8M19_08620;Dbxref=NCBI_GP:RUP92309.1;Name=RUP92309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121018.1;locus_tag=D8M19_08620;product=hypothetical protein;protein_id=RUP92309.1;transl_table=11 RBLY01000007.1 Genbank gene 112093 115104 . + . ID=gene-D8M19_08625;Name=D8M19_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08625 RBLY01000007.1 Protein Homology CDS 112093 115104 . + 0 ID=cds-RUP92310.1;Parent=gene-D8M19_08625;Dbxref=NCBI_GP:RUP92310.1;Name=RUP92310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121019.1;locus_tag=D8M19_08625;product=UPF0182 family protein;protein_id=RUP92310.1;transl_table=11 RBLY01000007.1 Genbank gene 115308 115384 . + . ID=gene-D8M19_08630;Name=D8M19_08630;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_08630 RBLY01000007.1 tRNAscan-SE tRNA 115308 115384 . + . ID=rna-D8M19_08630;Parent=gene-D8M19_08630;anticodon=(pos:115342..115344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08630;product=tRNA-Met RBLY01000007.1 tRNAscan-SE exon 115308 115384 . + . ID=exon-D8M19_08630-1;Parent=rna-D8M19_08630;anticodon=(pos:115342..115344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_08630;product=tRNA-Met RBLY01000007.1 Genbank gene 115486 116118 . + . ID=gene-D8M19_08635;Name=D8M19_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08635 RBLY01000007.1 Protein Homology CDS 115486 116118 . + 0 ID=cds-RUP92311.1;Parent=gene-D8M19_08635;Dbxref=NCBI_GP:RUP92311.1;Name=RUP92311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01810.16;locus_tag=D8M19_08635;product=hypothetical protein;protein_id=RUP92311.1;transl_table=11 RBLY01000007.1 Genbank gene 116142 116363 . + . ID=gene-D8M19_08640;Name=D8M19_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08640 RBLY01000007.1 GeneMarkS+ CDS 116142 116363 . + 0 ID=cds-RUP92312.1;Parent=gene-D8M19_08640;Dbxref=NCBI_GP:RUP92312.1;Name=RUP92312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08640;product=hypothetical protein;protein_id=RUP92312.1;transl_table=11 RBLY01000007.1 Genbank gene 116546 117904 . + . ID=gene-D8M19_08645;Name=D8M19_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08645 RBLY01000007.1 Protein Homology CDS 116546 117904 . + 0 ID=cds-RUP92313.1;Parent=gene-D8M19_08645;Dbxref=NCBI_GP:RUP92313.1;Name=RUP92313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121021.1;locus_tag=D8M19_08645;product=YjiH family protein;protein_id=RUP92313.1;transl_table=11 RBLY01000007.1 Genbank gene 117927 118673 . + . ID=gene-D8M19_08650;Name=D8M19_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08650 RBLY01000007.1 Protein Homology CDS 117927 118673 . + 0 ID=cds-RUP92314.1;Parent=gene-D8M19_08650;Dbxref=NCBI_GP:RUP92314.1;Name=RUP92314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121022.1;locus_tag=D8M19_08650;product=IclR family transcriptional regulator;protein_id=RUP92314.1;transl_table=11 RBLY01000007.1 Genbank gene 118798 120477 . + . ID=gene-D8M19_08655;Name=D8M19_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08655 RBLY01000007.1 Protein Homology CDS 118798 120477 . + 0 ID=cds-RUP92315.1;Parent=gene-D8M19_08655;Dbxref=NCBI_GP:RUP92315.1;Name=RUP92315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822923.1;locus_tag=D8M19_08655;product=urocanate hydratase;protein_id=RUP92315.1;transl_table=11 RBLY01000007.1 Genbank gene 120520 121005 . - . ID=gene-D8M19_08660;Name=D8M19_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08660 RBLY01000007.1 Protein Homology CDS 120520 121005 . - 0 ID=cds-RUP92316.1;Parent=gene-D8M19_08660;Dbxref=NCBI_GP:RUP92316.1;Name=RUP92316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006769502.1;locus_tag=D8M19_08660;product=DUF488 family protein;protein_id=RUP92316.1;transl_table=11 RBLY01000007.1 Genbank gene 121026 121910 . + . ID=gene-D8M19_08665;Name=D8M19_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08665 RBLY01000007.1 Protein Homology CDS 121026 121910 . + 0 ID=cds-RUP92317.1;Parent=gene-D8M19_08665;Dbxref=NCBI_GP:RUP92317.1;Name=RUP92317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121030.1;locus_tag=D8M19_08665;product=mechanosensitive ion channel family protein;protein_id=RUP92317.1;transl_table=11 RBLY01000007.1 Genbank gene 121910 122479 . + . ID=gene-D8M19_08670;Name=D8M19_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08670 RBLY01000007.1 Protein Homology CDS 121910 122479 . + 0 ID=cds-RUP92318.1;Parent=gene-D8M19_08670;Dbxref=NCBI_GP:RUP92318.1;Name=RUP92318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121031.1;locus_tag=D8M19_08670;product=VanZ family protein;protein_id=RUP92318.1;transl_table=11 RBLY01000007.1 Genbank gene 122911 124011 . + . ID=gene-D8M19_08675;Name=D8M19_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08675 RBLY01000007.1 Protein Homology CDS 122911 124011 . + 0 ID=cds-RUP92339.1;Parent=gene-D8M19_08675;Dbxref=NCBI_GP:RUP92339.1;Name=RUP92339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015400213.1;locus_tag=D8M19_08675;product=serine protease;protein_id=RUP92339.1;transl_table=11 RBLY01000007.1 Genbank gene 124087 124911 . - . ID=gene-D8M19_08680;Name=hisN;gbkey=Gene;gene=hisN;gene_biotype=protein_coding;locus_tag=D8M19_08680 RBLY01000007.1 Protein Homology CDS 124087 124911 . - 0 ID=cds-RUP92319.1;Parent=gene-D8M19_08680;Dbxref=NCBI_GP:RUP92319.1;Name=RUP92319.1;gbkey=CDS;gene=hisN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121033.1;locus_tag=D8M19_08680;product=histidinol-phosphatase;protein_id=RUP92319.1;transl_table=11 RBLY01000007.1 Genbank gene 124904 125812 . - . ID=gene-D8M19_08685;Name=D8M19_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08685 RBLY01000007.1 Protein Homology CDS 124904 125812 . - 0 ID=cds-RUP92320.1;Parent=gene-D8M19_08685;Dbxref=NCBI_GP:RUP92320.1;Name=RUP92320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121034.1;locus_tag=D8M19_08685;product=inositol monophosphatase family protein;protein_id=RUP92320.1;transl_table=11 RBLY01000007.1 Genbank gene 126005 127150 . + . ID=gene-D8M19_08690;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=D8M19_08690 RBLY01000007.1 Protein Homology CDS 126005 127150 . + 0 ID=cds-RUP92321.1;Parent=gene-D8M19_08690;Dbxref=NCBI_GP:RUP92321.1;Name=RUP92321.1;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014310169.1;locus_tag=D8M19_08690;product=peptide chain release factor 2;protein_id=RUP92321.1;transl_table=11 RBLY01000007.1 Genbank gene 127147 128829 . - . ID=gene-D8M19_08695;Name=D8M19_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08695 RBLY01000007.1 Protein Homology CDS 127147 128829 . - 0 ID=cds-RUP92322.1;Parent=gene-D8M19_08695;Dbxref=NCBI_GP:RUP92322.1;Name=RUP92322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121036.1;locus_tag=D8M19_08695;product=AbgT family transporter;protein_id=RUP92322.1;transl_table=11 RBLY01000007.1 Genbank gene 128990 129679 . + . ID=gene-D8M19_08700;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=D8M19_08700 RBLY01000007.1 Protein Homology CDS 128990 129679 . + 0 ID=cds-RUP92323.1;Parent=gene-D8M19_08700;Dbxref=NCBI_GP:RUP92323.1;Name=RUP92323.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600031.1;locus_tag=D8M19_08700;product=cell division ATP-binding protein FtsE;protein_id=RUP92323.1;transl_table=11 RBLY01000007.1 Genbank gene 129724 130626 . + . ID=gene-D8M19_08705;Name=D8M19_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08705 RBLY01000007.1 Protein Homology CDS 129724 130626 . + 0 ID=cds-RUP92324.1;Parent=gene-D8M19_08705;Dbxref=NCBI_GP:RUP92324.1;Name=RUP92324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014318805.1;locus_tag=D8M19_08705;product=ABC transporter permease;protein_id=RUP92324.1;transl_table=11 RBLY01000007.1 Genbank gene 130649 131158 . + . ID=gene-D8M19_08710;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=D8M19_08710 RBLY01000007.1 Protein Homology CDS 130649 131158 . + 0 ID=cds-RUP92325.1;Parent=gene-D8M19_08710;Dbxref=NCBI_GP:RUP92325.1;Name=RUP92325.1;gbkey=CDS;gene=smpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322310.1;locus_tag=D8M19_08710;product=SsrA-binding protein SmpB;protein_id=RUP92325.1;transl_table=11 RBLY01000007.1 Genbank gene 131237 133243 . + . ID=gene-D8M19_08715;Name=D8M19_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08715 RBLY01000007.1 Protein Homology CDS 131237 133243 . + 0 ID=cds-RUP92326.1;Parent=gene-D8M19_08715;Dbxref=NCBI_GP:RUP92326.1;Name=RUP92326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121040.1;locus_tag=D8M19_08715;product=acetyltransferase;protein_id=RUP92326.1;transl_table=11 RBLY01000007.1 Genbank gene 133330 134115 . - . ID=gene-D8M19_08720;Name=D8M19_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08720 RBLY01000007.1 Protein Homology CDS 133330 134115 . - 0 ID=cds-RUP92340.1;Parent=gene-D8M19_08720;Dbxref=NCBI_GP:RUP92340.1;Name=RUP92340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121041.1;locus_tag=D8M19_08720;product=DUF4300 family protein;protein_id=RUP92340.1;transl_table=11 RBLY01000007.1 Genbank gene 134512 134899 . + . ID=gene-D8M19_08725;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=D8M19_08725 RBLY01000007.1 cmsearch tmRNA 134512 134899 . + . ID=rna-D8M19_08725;Parent=gene-D8M19_08725;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_08725;product=transfer-messenger RNA RBLY01000007.1 cmsearch exon 134512 134899 . + . ID=exon-D8M19_08725-1;Parent=rna-D8M19_08725;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=D8M19_08725;product=transfer-messenger RNA RBLY01000007.1 Genbank gene 135409 136434 . + . ID=gene-D8M19_08730;Name=D8M19_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08730 RBLY01000007.1 Protein Homology CDS 135409 136434 . + 0 ID=cds-RUP92327.1;Parent=gene-D8M19_08730;Dbxref=NCBI_GP:RUP92327.1;Name=RUP92327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11199.6;locus_tag=D8M19_08730;product=DUF2891 family protein;protein_id=RUP92327.1;transl_table=11 RBLY01000007.1 Genbank gene 136520 138010 . - . ID=gene-D8M19_08735;Name=D8M19_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08735 RBLY01000007.1 Protein Homology CDS 136520 138010 . - 0 ID=cds-RUP92328.1;Parent=gene-D8M19_08735;Dbxref=NCBI_GP:RUP92328.1;Name=RUP92328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121045.1;locus_tag=D8M19_08735;product=MFS transporter;protein_id=RUP92328.1;transl_table=11 RBLY01000007.1 Genbank gene 138273 138638 . + . ID=gene-D8M19_08740;Name=D8M19_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08740 RBLY01000007.1 Protein Homology CDS 138273 138638 . + 0 ID=cds-RUP92341.1;Parent=gene-D8M19_08740;Dbxref=NCBI_GP:RUP92341.1;Name=RUP92341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118993.1;locus_tag=D8M19_08740;product=hypothetical protein;protein_id=RUP92341.1;transl_table=11 RBLY01000007.1 Genbank gene 138866 139915 . + . ID=gene-D8M19_08745;Name=D8M19_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08745 RBLY01000007.1 Protein Homology CDS 138866 139915 . + 0 ID=cds-RUP92329.1;Parent=gene-D8M19_08745;Dbxref=NCBI_GP:RUP92329.1;Name=RUP92329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121046.1;locus_tag=D8M19_08745;product=iron ABC transporter substrate-binding protein;protein_id=RUP92329.1;transl_table=11 RBLY01000007.1 Genbank gene 140196 141122 . + . ID=gene-D8M19_08750;Name=D8M19_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08750 RBLY01000007.1 Protein Homology CDS 140196 141122 . + 0 ID=cds-RUP92342.1;Parent=gene-D8M19_08750;Dbxref=NCBI_GP:RUP92342.1;Name=RUP92342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005277614.1;locus_tag=D8M19_08750;product=ABC transporter permease;protein_id=RUP92342.1;transl_table=11 RBLY01000007.1 Genbank gene 141115 142266 . + . ID=gene-D8M19_08755;Name=D8M19_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08755 RBLY01000007.1 Protein Homology CDS 141115 142266 . + 0 ID=cds-RUP92330.1;Parent=gene-D8M19_08755;Dbxref=NCBI_GP:RUP92330.1;Name=RUP92330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121048.1;locus_tag=D8M19_08755;product=iron ABC transporter permease;protein_id=RUP92330.1;transl_table=11 RBLY01000007.1 Genbank gene 142263 143018 . + . ID=gene-D8M19_08760;Name=D8M19_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08760 RBLY01000007.1 Protein Homology CDS 142263 143018 . + 0 ID=cds-RUP92331.1;Parent=gene-D8M19_08760;Dbxref=NCBI_GP:RUP92331.1;Name=RUP92331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_600042.1;locus_tag=D8M19_08760;product=ATP-binding cassette domain-containing protein;protein_id=RUP92331.1;transl_table=11 RBLY01000007.1 Genbank gene 143081 144064 . + . ID=gene-D8M19_08765;Name=D8M19_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08765 RBLY01000007.1 GeneMarkS+ CDS 143081 144064 . + 0 ID=cds-RUP92332.1;Parent=gene-D8M19_08765;Dbxref=NCBI_GP:RUP92332.1;Name=RUP92332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08765;product=arsenic resistance protein;protein_id=RUP92332.1;transl_table=11 ##sequence-region RBLY01000008.1 1 98427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000008.1 Genbank region 1 98427 . + . ID=RBLY01000008.1:1..98427;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000008.1 Genbank gene 161 874 . - . ID=gene-D8M19_08770;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=D8M19_08770 RBLY01000008.1 Protein Homology CDS 161 874 . - 0 ID=cds-RUP92107.1;Parent=gene-D8M19_08770;Dbxref=NCBI_GP:RUP92107.1;Name=RUP92107.1;gbkey=CDS;gene=cas5e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119868.1;locus_tag=D8M19_08770;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=RUP92107.1;transl_table=11 RBLY01000008.1 Genbank gene 867 1952 . - . ID=gene-D8M19_08775;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=D8M19_08775 RBLY01000008.1 Protein Homology CDS 867 1952 . - 0 ID=cds-RUP92108.1;Parent=gene-D8M19_08775;Dbxref=NCBI_GP:RUP92108.1;Name=RUP92108.1;gbkey=CDS;gene=cas7e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119869.1;locus_tag=D8M19_08775;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=RUP92108.1;transl_table=11 RBLY01000008.1 Genbank gene 1973 2614 . - . ID=gene-D8M19_08780;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;locus_tag=D8M19_08780 RBLY01000008.1 Protein Homology CDS 1973 2614 . - 0 ID=cds-RUP92109.1;Parent=gene-D8M19_08780;Dbxref=NCBI_GP:RUP92109.1;Name=RUP92109.1;gbkey=CDS;gene=casB;inference=COORDINATES: protein motif:HMM:TIGR02548;locus_tag=D8M19_08780;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=RUP92109.1;transl_table=11 RBLY01000008.1 Genbank gene 2611 4227 . - . ID=gene-D8M19_08785;Name=D8M19_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08785 RBLY01000008.1 Protein Homology CDS 2611 4227 . - 0 ID=cds-RUP92110.1;Parent=gene-D8M19_08785;Dbxref=NCBI_GP:RUP92110.1;Name=RUP92110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09481.8;locus_tag=D8M19_08785;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=RUP92110.1;transl_table=11 RBLY01000008.1 Genbank gene 4484 5170 . + . ID=gene-D8M19_08790;Name=D8M19_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08790 RBLY01000008.1 Protein Homology CDS 4484 5170 . + 0 ID=cds-RUP92111.1;Parent=gene-D8M19_08790;Dbxref=NCBI_GP:RUP92111.1;Name=RUP92111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08798.9;locus_tag=D8M19_08790;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=RUP92111.1;transl_table=11 RBLY01000008.1 Genbank gene 5167 7842 . + . ID=gene-D8M19_08795;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=D8M19_08795 RBLY01000008.1 Protein Homology CDS 5167 7842 . + 0 ID=cds-RUP92112.1;Parent=gene-D8M19_08795;Dbxref=NCBI_GP:RUP92112.1;Name=RUP92112.1;gbkey=CDS;gene=cas3;inference=COORDINATES: protein motif:HMM:TIGR01587%2CHMM:TIGR01596;locus_tag=D8M19_08795;product=CRISPR-associated helicase Cas3';protein_id=RUP92112.1;transl_table=11 RBLY01000008.1 Genbank gene 7844 8779 . + . ID=gene-D8M19_08800;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=D8M19_08800 RBLY01000008.1 Protein Homology CDS 7844 8779 . + 0 ID=cds-RUP92113.1;Parent=gene-D8M19_08800;Dbxref=NCBI_GP:RUP92113.1;Name=RUP92113.1;gbkey=CDS;gene=cas1e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119874.1;locus_tag=D8M19_08800;product=type I-E CRISPR-associated endonuclease Cas1;protein_id=RUP92113.1;transl_table=11 RBLY01000008.1 Genbank gene 8780 9091 . + . ID=gene-D8M19_08805;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=D8M19_08805 RBLY01000008.1 Protein Homology CDS 8780 9091 . + 0 ID=cds-RUP92114.1;Parent=gene-D8M19_08805;Dbxref=NCBI_GP:RUP92114.1;Name=RUP92114.1;gbkey=CDS;gene=cas2e;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018119875.1;locus_tag=D8M19_08805;product=type I-E CRISPR-associated endoribonuclease Cas2;protein_id=RUP92114.1;transl_table=11 RBLY01000008.1 Genbank direct_repeat 9113 11474 . + . ID=id-RBLY01000008.1:9113..11474;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=9113..9141;rpt_unit_seq=ctcttctccgcgcatgcggaggtaattcc RBLY01000008.1 Genbank gene 11686 11928 . - . ID=gene-D8M19_08810;Name=D8M19_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08810 RBLY01000008.1 GeneMarkS+ CDS 11686 11928 . - 0 ID=cds-RUP92115.1;Parent=gene-D8M19_08810;Dbxref=NCBI_GP:RUP92115.1;Name=RUP92115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08810;product=hypothetical protein;protein_id=RUP92115.1;transl_table=11 RBLY01000008.1 Genbank gene 12053 12439 . - . ID=gene-D8M19_08815;Name=D8M19_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08815 RBLY01000008.1 GeneMarkS+ CDS 12053 12439 . - 0 ID=cds-RUP92116.1;Parent=gene-D8M19_08815;Dbxref=NCBI_GP:RUP92116.1;Name=RUP92116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08815;product=hypothetical protein;protein_id=RUP92116.1;transl_table=11 RBLY01000008.1 Genbank gene 12895 13806 . + . ID=gene-D8M19_08820;Name=D8M19_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08820 RBLY01000008.1 Protein Homology CDS 12895 13806 . + 0 ID=cds-RUP92186.1;Parent=gene-D8M19_08820;Dbxref=NCBI_GP:RUP92186.1;Name=RUP92186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120529.1;locus_tag=D8M19_08820;product=HtaA protein;protein_id=RUP92186.1;transl_table=11 RBLY01000008.1 Genbank gene 13893 14513 . - . ID=gene-D8M19_08825;Name=D8M19_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08825 RBLY01000008.1 Protein Homology CDS 13893 14513 . - 0 ID=cds-RUP92117.1;Parent=gene-D8M19_08825;Dbxref=NCBI_GP:RUP92117.1;Name=RUP92117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01497.16;locus_tag=D8M19_08825;product=hypothetical protein;protein_id=RUP92117.1;transl_table=11 RBLY01000008.1 Genbank gene 14544 15260 . - . ID=gene-D8M19_08830;Name=D8M19_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08830 RBLY01000008.1 Protein Homology CDS 14544 15260 . - 0 ID=cds-RUP92118.1;Parent=gene-D8M19_08830;Dbxref=NCBI_GP:RUP92118.1;Name=RUP92118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298108.1;locus_tag=D8M19_08830;product=ABC transporter ATP-binding protein;protein_id=RUP92118.1;transl_table=11 RBLY01000008.1 Genbank pseudogene 15257 16255 . - . ID=gene-D8M19_08835;Name=D8M19_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_08835;pseudo=true RBLY01000008.1 Protein Homology CDS 15257 16255 . - 0 ID=cds-D8M19_08835;Parent=gene-D8M19_08835;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006768956.1;locus_tag=D8M19_08835;product=iron ABC transporter permease;pseudo=true;transl_table=11 RBLY01000008.1 Genbank gene 16502 16807 . + . ID=gene-D8M19_08840;Name=D8M19_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08840 RBLY01000008.1 Protein Homology CDS 16502 16807 . + 0 ID=cds-RUP92119.1;Parent=gene-D8M19_08840;Dbxref=NCBI_GP:RUP92119.1;Name=RUP92119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006840017.1;locus_tag=D8M19_08840;product=ArsR family transcriptional regulator;protein_id=RUP92119.1;transl_table=11 RBLY01000008.1 Genbank gene 16877 17752 . - . ID=gene-D8M19_08845;Name=D8M19_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08845 RBLY01000008.1 Protein Homology CDS 16877 17752 . - 0 ID=cds-RUP92120.1;Parent=gene-D8M19_08845;Dbxref=NCBI_GP:RUP92120.1;Name=RUP92120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013242775.1;locus_tag=D8M19_08845;product=urease accessory protein UreD;protein_id=RUP92120.1;transl_table=11 RBLY01000008.1 Genbank gene 17754 18368 . - . ID=gene-D8M19_08850;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=D8M19_08850 RBLY01000008.1 Protein Homology CDS 17754 18368 . - 0 ID=cds-RUP92121.1;Parent=gene-D8M19_08850;Dbxref=NCBI_GP:RUP92121.1;Name=RUP92121.1;gbkey=CDS;gene=ureG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014655870.1;locus_tag=D8M19_08850;product=urease accessory protein UreG;protein_id=RUP92121.1;transl_table=11 RBLY01000008.1 Genbank gene 18450 19199 . - . ID=gene-D8M19_08855;Name=D8M19_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08855 RBLY01000008.1 Protein Homology CDS 18450 19199 . - 0 ID=cds-RUP92122.1;Parent=gene-D8M19_08855;Dbxref=NCBI_GP:RUP92122.1;Name=RUP92122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005396004.1;locus_tag=D8M19_08855;product=urease accessory protein UreF;protein_id=RUP92122.1;transl_table=11 RBLY01000008.1 Genbank gene 19180 19653 . - . ID=gene-D8M19_08860;Name=D8M19_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08860 RBLY01000008.1 Protein Homology CDS 19180 19653 . - 0 ID=cds-RUP92123.1;Parent=gene-D8M19_08860;Dbxref=NCBI_GP:RUP92123.1;Name=RUP92123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005392117.1;locus_tag=D8M19_08860;product=urease accessory protein UreE;protein_id=RUP92123.1;transl_table=11 RBLY01000008.1 Genbank gene 19702 21414 . - . ID=gene-D8M19_08865;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=D8M19_08865 RBLY01000008.1 Protein Homology CDS 19702 21414 . - 0 ID=cds-RUP92124.1;Parent=gene-D8M19_08865;Dbxref=NCBI_GP:RUP92124.1;Name=RUP92124.1;gbkey=CDS;gene=ureC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013912492.1;locus_tag=D8M19_08865;product=urease subunit alpha;protein_id=RUP92124.1;transl_table=11 RBLY01000008.1 Genbank gene 21468 21779 . - . ID=gene-D8M19_08870;Name=D8M19_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08870 RBLY01000008.1 Protein Homology CDS 21468 21779 . - 0 ID=cds-RUP92125.1;Parent=gene-D8M19_08870;Dbxref=NCBI_GP:RUP92125.1;Name=RUP92125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013912493.1;locus_tag=D8M19_08870;product=urease subunit beta;protein_id=RUP92125.1;transl_table=11 RBLY01000008.1 Genbank gene 21825 22127 . - . ID=gene-D8M19_08875;Name=D8M19_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08875 RBLY01000008.1 Protein Homology CDS 21825 22127 . - 0 ID=cds-RUP92126.1;Parent=gene-D8M19_08875;Dbxref=NCBI_GP:RUP92126.1;Name=RUP92126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847876.1;locus_tag=D8M19_08875;product=urease subunit gamma;protein_id=RUP92126.1;transl_table=11 RBLY01000008.1 Genbank gene 22228 23409 . - . ID=gene-D8M19_08880;Name=D8M19_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08880 RBLY01000008.1 Protein Homology CDS 22228 23409 . - 0 ID=cds-RUP92127.1;Parent=gene-D8M19_08880;Dbxref=NCBI_GP:RUP92127.1;Name=RUP92127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018582704.1;locus_tag=D8M19_08880;product=DMT family transporter;protein_id=RUP92127.1;transl_table=11 RBLY01000008.1 Genbank gene 24043 24645 . - . ID=gene-D8M19_08885;Name=D8M19_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08885 RBLY01000008.1 GeneMarkS+ CDS 24043 24645 . - 0 ID=cds-RUP92128.1;Parent=gene-D8M19_08885;Dbxref=NCBI_GP:RUP92128.1;Name=RUP92128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08885;product=hypothetical protein;protein_id=RUP92128.1;transl_table=11 RBLY01000008.1 Genbank gene 24681 25814 . - . ID=gene-D8M19_08890;Name=D8M19_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08890 RBLY01000008.1 GeneMarkS+ CDS 24681 25814 . - 0 ID=cds-RUP92129.1;Parent=gene-D8M19_08890;Dbxref=NCBI_GP:RUP92129.1;Name=RUP92129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08890;product=hypothetical protein;protein_id=RUP92129.1;transl_table=11 RBLY01000008.1 Genbank gene 26014 27021 . - . ID=gene-D8M19_08895;Name=D8M19_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08895 RBLY01000008.1 GeneMarkS+ CDS 26014 27021 . - 0 ID=cds-RUP92130.1;Parent=gene-D8M19_08895;Dbxref=NCBI_GP:RUP92130.1;Name=RUP92130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_08895;product=hypothetical protein;protein_id=RUP92130.1;transl_table=11 RBLY01000008.1 Genbank gene 27482 30631 . - . ID=gene-D8M19_08900;Name=D8M19_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08900 RBLY01000008.1 Protein Homology CDS 27482 30631 . - 0 ID=cds-RUP92187.1;Parent=gene-D8M19_08900;Dbxref=NCBI_GP:RUP92187.1;Name=RUP92187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324535.1;locus_tag=D8M19_08900;product=isoleucine--tRNA ligase;protein_id=RUP92187.1;transl_table=11 RBLY01000008.1 Genbank gene 30977 31129 . - . ID=gene-D8M19_08905;Name=D8M19_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08905 RBLY01000008.1 Protein Homology CDS 30977 31129 . - 0 ID=cds-RUP92131.1;Parent=gene-D8M19_08905;Dbxref=NCBI_GP:RUP92131.1;Name=RUP92131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005528732.1;locus_tag=D8M19_08905;product=zinc-binding dehydrogenase;protein_id=RUP92131.1;transl_table=11 RBLY01000008.1 Genbank gene 31354 32157 . + . ID=gene-D8M19_08910;Name=D8M19_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08910 RBLY01000008.1 Protein Homology CDS 31354 32157 . + 0 ID=cds-RUP92132.1;Parent=gene-D8M19_08910;Dbxref=NCBI_GP:RUP92132.1;Name=RUP92132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120515.1;locus_tag=D8M19_08910;product=(Fe-S)-binding protein;protein_id=RUP92132.1;transl_table=11 RBLY01000008.1 Genbank gene 32157 33632 . + . ID=gene-D8M19_08915;Name=D8M19_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08915 RBLY01000008.1 Protein Homology CDS 32157 33632 . + 0 ID=cds-RUP92133.1;Parent=gene-D8M19_08915;Dbxref=NCBI_GP:RUP92133.1;Name=RUP92133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120514.1;locus_tag=D8M19_08915;product=iron-sulfur cluster-binding protein;protein_id=RUP92133.1;transl_table=11 RBLY01000008.1 Genbank gene 33632 34267 . + . ID=gene-D8M19_08920;Name=D8M19_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08920 RBLY01000008.1 Protein Homology CDS 33632 34267 . + 0 ID=cds-RUP92134.1;Parent=gene-D8M19_08920;Dbxref=NCBI_GP:RUP92134.1;Name=RUP92134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120513.1;locus_tag=D8M19_08920;product=lactate utilization protein C;protein_id=RUP92134.1;transl_table=11 RBLY01000008.1 Genbank gene 34574 35650 . - . ID=gene-D8M19_08925;Name=D8M19_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08925 RBLY01000008.1 Protein Homology CDS 34574 35650 . - 0 ID=cds-RUP92135.1;Parent=gene-D8M19_08925;Dbxref=NCBI_GP:RUP92135.1;Name=RUP92135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120511.1;locus_tag=D8M19_08925;product=DivIVA domain-containing protein;protein_id=RUP92135.1;transl_table=11 RBLY01000008.1 Genbank gene 35857 36147 . - . ID=gene-D8M19_08930;Name=D8M19_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08930 RBLY01000008.1 Protein Homology CDS 35857 36147 . - 0 ID=cds-RUP92136.1;Parent=gene-D8M19_08930;Dbxref=NCBI_GP:RUP92136.1;Name=RUP92136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324523.1;locus_tag=D8M19_08930;product=YggT family protein;protein_id=RUP92136.1;transl_table=11 RBLY01000008.1 Genbank gene 36182 36763 . - . ID=gene-D8M19_08935;Name=D8M19_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08935 RBLY01000008.1 Protein Homology CDS 36182 36763 . - 0 ID=cds-RUP92137.1;Parent=gene-D8M19_08935;Dbxref=NCBI_GP:RUP92137.1;Name=RUP92137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015401307.1;locus_tag=D8M19_08935;product=DUF552 domain-containing protein;protein_id=RUP92137.1;transl_table=11 RBLY01000008.1 Genbank gene 36820 37626 . - . ID=gene-D8M19_08940;Name=D8M19_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08940 RBLY01000008.1 Protein Homology CDS 36820 37626 . - 0 ID=cds-RUP92138.1;Parent=gene-D8M19_08940;Dbxref=NCBI_GP:RUP92138.1;Name=RUP92138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020384521.1;locus_tag=D8M19_08940;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=RUP92138.1;transl_table=11 RBLY01000008.1 Genbank gene 37640 38410 . - . ID=gene-D8M19_08945;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=D8M19_08945 RBLY01000008.1 Protein Homology CDS 37640 38410 . - 0 ID=cds-RUP92139.1;Parent=gene-D8M19_08945;Dbxref=NCBI_GP:RUP92139.1;Name=RUP92139.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120507.1;locus_tag=D8M19_08945;product=peptidoglycan editing factor PgeF;protein_id=RUP92139.1;transl_table=11 RBLY01000008.1 Genbank gene 38420 39670 . - . ID=gene-D8M19_08950;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=D8M19_08950 RBLY01000008.1 Protein Homology CDS 38420 39670 . - 0 ID=cds-RUP92140.1;Parent=gene-D8M19_08950;Dbxref=NCBI_GP:RUP92140.1;Name=RUP92140.1;gbkey=CDS;gene=ftsZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010190525.1;locus_tag=D8M19_08950;product=cell division protein FtsZ;protein_id=RUP92140.1;transl_table=11 RBLY01000008.1 Genbank gene 39872 40528 . - . ID=gene-D8M19_08955;Name=D8M19_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08955 RBLY01000008.1 Protein Homology CDS 39872 40528 . - 0 ID=cds-RUP92141.1;Parent=gene-D8M19_08955;Dbxref=NCBI_GP:RUP92141.1;Name=RUP92141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03799.13;locus_tag=D8M19_08955;product=FtsQ-type POTRA domain-containing protein;protein_id=RUP92141.1;transl_table=11 RBLY01000008.1 Genbank gene 40531 42135 . - . ID=gene-D8M19_08960;Name=D8M19_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08960 RBLY01000008.1 Protein Homology CDS 40531 42135 . - 0 ID=cds-RUP92142.1;Parent=gene-D8M19_08960;Dbxref=NCBI_GP:RUP92142.1;Name=RUP92142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120504.1;locus_tag=D8M19_08960;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=RUP92142.1;transl_table=11 RBLY01000008.1 Genbank gene 42160 43302 . - . ID=gene-D8M19_08965;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=D8M19_08965 RBLY01000008.1 Protein Homology CDS 42160 43302 . - 0 ID=cds-RUP92143.1;Parent=gene-D8M19_08965;Dbxref=NCBI_GP:RUP92143.1;Name=RUP92143.1;gbkey=CDS;gene=murG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120503.1;locus_tag=D8M19_08965;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=RUP92143.1;transl_table=11 RBLY01000008.1 Genbank gene 43275 44762 . - . ID=gene-D8M19_08970;Name=D8M19_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08970 RBLY01000008.1 Protein Homology CDS 43275 44762 . - 0 ID=cds-RUP92144.1;Parent=gene-D8M19_08970;Dbxref=NCBI_GP:RUP92144.1;Name=RUP92144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120502.1;locus_tag=D8M19_08970;product=cell division protein FtsW;protein_id=RUP92144.1;transl_table=11 RBLY01000008.1 Genbank gene 44822 46339 . - . ID=gene-D8M19_08975;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=D8M19_08975 RBLY01000008.1 Protein Homology CDS 44822 46339 . - 0 ID=cds-RUP92145.1;Parent=gene-D8M19_08975;Dbxref=NCBI_GP:RUP92145.1;Name=RUP92145.1;gbkey=CDS;gene=murD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120501.1;locus_tag=D8M19_08975;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=RUP92145.1;transl_table=11 RBLY01000008.1 Genbank gene 46347 47444 . - . ID=gene-D8M19_08980;Name=D8M19_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08980 RBLY01000008.1 Protein Homology CDS 46347 47444 . - 0 ID=cds-RUP92146.1;Parent=gene-D8M19_08980;Dbxref=NCBI_GP:RUP92146.1;Name=RUP92146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120500.1;locus_tag=D8M19_08980;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=RUP92146.1;transl_table=11 RBLY01000008.1 Genbank gene 47519 49042 . - . ID=gene-D8M19_08985;Name=D8M19_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08985 RBLY01000008.1 Protein Homology CDS 47519 49042 . - 0 ID=cds-RUP92147.1;Parent=gene-D8M19_08985;Dbxref=NCBI_GP:RUP92147.1;Name=RUP92147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006823505.1;locus_tag=D8M19_08985;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=RUP92147.1;transl_table=11 RBLY01000008.1 Genbank gene 49042 50628 . - . ID=gene-D8M19_08990;Name=D8M19_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08990 RBLY01000008.1 Protein Homology CDS 49042 50628 . - 0 ID=cds-RUP92148.1;Parent=gene-D8M19_08990;Dbxref=NCBI_GP:RUP92148.1;Name=RUP92148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120498.1;locus_tag=D8M19_08990;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=RUP92148.1;transl_table=11 RBLY01000008.1 Genbank gene 50750 52744 . - . ID=gene-D8M19_08995;Name=D8M19_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_08995 RBLY01000008.1 Protein Homology CDS 50750 52744 . - 0 ID=cds-RUP92149.1;Parent=gene-D8M19_08995;Dbxref=NCBI_GP:RUP92149.1;Name=RUP92149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120497.1;locus_tag=D8M19_08995;product=penicillin-binding protein 2;protein_id=RUP92149.1;transl_table=11 RBLY01000008.1 Genbank gene 52767 53747 . - . ID=gene-D8M19_09000;Name=D8M19_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09000 RBLY01000008.1 GeneMarkS+ CDS 52767 53747 . - 0 ID=cds-RUP92150.1;Parent=gene-D8M19_09000;Dbxref=NCBI_GP:RUP92150.1;Name=RUP92150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09000;product=hypothetical protein;protein_id=RUP92150.1;transl_table=11 RBLY01000008.1 Genbank gene 53750 54928 . - . ID=gene-D8M19_09005;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=D8M19_09005 RBLY01000008.1 Protein Homology CDS 53750 54928 . - 0 ID=cds-RUP92151.1;Parent=gene-D8M19_09005;Dbxref=NCBI_GP:RUP92151.1;Name=RUP92151.1;gbkey=CDS;gene=rsmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120495.1;locus_tag=D8M19_09005;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=RUP92151.1;transl_table=11 RBLY01000008.1 Genbank gene 55073 55507 . - . ID=gene-D8M19_09010;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=D8M19_09010 RBLY01000008.1 Protein Homology CDS 55073 55507 . - 0 ID=cds-RUP92152.1;Parent=gene-D8M19_09010;Dbxref=NCBI_GP:RUP92152.1;Name=RUP92152.1;gbkey=CDS;gene=mraZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839943.1;locus_tag=D8M19_09010;product=transcriptional regulator MraZ;protein_id=RUP92152.1;transl_table=11 RBLY01000008.1 Genbank gene 55969 56424 . - . ID=gene-D8M19_09015;Name=D8M19_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09015 RBLY01000008.1 Protein Homology CDS 55969 56424 . - 0 ID=cds-RUP92188.1;Parent=gene-D8M19_09015;Dbxref=NCBI_GP:RUP92188.1;Name=RUP92188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297090.1;locus_tag=D8M19_09015;product=DUF3040 domain-containing protein;protein_id=RUP92188.1;transl_table=11 RBLY01000008.1 Genbank gene 56603 57046 . - . ID=gene-D8M19_09020;Name=D8M19_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09020 RBLY01000008.1 GeneMarkS+ CDS 56603 57046 . - 0 ID=cds-RUP92153.1;Parent=gene-D8M19_09020;Dbxref=NCBI_GP:RUP92153.1;Name=RUP92153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09020;product=hypothetical protein;protein_id=RUP92153.1;transl_table=11 RBLY01000008.1 Genbank gene 57260 57829 . + . ID=gene-D8M19_09025;Name=D8M19_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09025 RBLY01000008.1 Protein Homology CDS 57260 57829 . + 0 ID=cds-RUP92154.1;Parent=gene-D8M19_09025;Dbxref=NCBI_GP:RUP92154.1;Name=RUP92154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018580620.1;locus_tag=D8M19_09025;product=GNAT family N-acetyltransferase;protein_id=RUP92154.1;transl_table=11 RBLY01000008.1 Genbank gene 57878 58990 . + . ID=gene-D8M19_09030;Name=D8M19_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09030 RBLY01000008.1 Protein Homology CDS 57878 58990 . + 0 ID=cds-RUP92155.1;Parent=gene-D8M19_09030;Dbxref=NCBI_GP:RUP92155.1;Name=RUP92155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120490.1;locus_tag=D8M19_09030;product=polyprenyl synthetase family protein;protein_id=RUP92155.1;transl_table=11 RBLY01000008.1 Genbank gene 58990 60522 . + . ID=gene-D8M19_09035;Name=D8M19_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09035 RBLY01000008.1 Protein Homology CDS 58990 60522 . + 0 ID=cds-RUP92156.1;Parent=gene-D8M19_09035;Dbxref=NCBI_GP:RUP92156.1;Name=RUP92156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120489.1;locus_tag=D8M19_09035;product=alpha-(1->6)-mannopyranosyltransferase A;protein_id=RUP92156.1;transl_table=11 RBLY01000008.1 Genbank gene 60519 60902 . - . ID=gene-D8M19_09040;Name=D8M19_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09040 RBLY01000008.1 Protein Homology CDS 60519 60902 . - 0 ID=cds-RUP92157.1;Parent=gene-D8M19_09040;Dbxref=NCBI_GP:RUP92157.1;Name=RUP92157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120488.1;locus_tag=D8M19_09040;product=DNA-binding protein;protein_id=RUP92157.1;transl_table=11 RBLY01000008.1 Genbank gene 61044 62384 . + . ID=gene-D8M19_09045;Name=D8M19_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09045 RBLY01000008.1 Protein Homology CDS 61044 62384 . + 0 ID=cds-RUP92158.1;Parent=gene-D8M19_09045;Dbxref=NCBI_GP:RUP92158.1;Name=RUP92158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120487.1;locus_tag=D8M19_09045;product=serine/threonine protein kinase;protein_id=RUP92158.1;transl_table=11 RBLY01000008.1 Genbank gene 62553 63941 . - . ID=gene-D8M19_09050;Name=D8M19_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09050 RBLY01000008.1 Protein Homology CDS 62553 63941 . - 0 ID=cds-RUP92159.1;Parent=gene-D8M19_09050;Dbxref=NCBI_GP:RUP92159.1;Name=RUP92159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016829510.1;locus_tag=D8M19_09050;product=3-deoxy-7-phosphoheptulonate synthase class II;protein_id=RUP92159.1;transl_table=11 RBLY01000008.1 Genbank gene 63974 64489 . - . ID=gene-D8M19_09055;Name=D8M19_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09055 RBLY01000008.1 Protein Homology CDS 63974 64489 . - 0 ID=cds-RUP92160.1;Parent=gene-D8M19_09055;Dbxref=NCBI_GP:RUP92160.1;Name=RUP92160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120485.1;locus_tag=D8M19_09055;product=polyadenylate-specific 3'-exoribonuclease AS;protein_id=RUP92160.1;transl_table=11 RBLY01000008.1 Genbank gene 64734 65882 . - . ID=gene-D8M19_09060;Name=D8M19_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09060 RBLY01000008.1 Protein Homology CDS 64734 65882 . - 0 ID=cds-RUP92161.1;Parent=gene-D8M19_09060;Dbxref=NCBI_GP:RUP92161.1;Name=RUP92161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01757.20;locus_tag=D8M19_09060;product=hypothetical protein;protein_id=RUP92161.1;transl_table=11 RBLY01000008.1 Genbank gene 65845 66585 . - . ID=gene-D8M19_09065;Name=D8M19_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09065 RBLY01000008.1 Protein Homology CDS 65845 66585 . - 0 ID=cds-RUP92189.1;Parent=gene-D8M19_09065;Dbxref=NCBI_GP:RUP92189.1;Name=RUP92189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120482.1;locus_tag=D8M19_09065;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=RUP92189.1;transl_table=11 RBLY01000008.1 Genbank gene 66650 67627 . - . ID=gene-D8M19_09070;Name=D8M19_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09070 RBLY01000008.1 Protein Homology CDS 66650 67627 . - 0 ID=cds-RUP92162.1;Parent=gene-D8M19_09070;Dbxref=NCBI_GP:RUP92162.1;Name=RUP92162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120481.1;locus_tag=D8M19_09070;product=ROK family protein;protein_id=RUP92162.1;transl_table=11 RBLY01000008.1 Genbank gene 67781 68818 . - . ID=gene-D8M19_09075;Name=D8M19_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09075 RBLY01000008.1 Protein Homology CDS 67781 68818 . - 0 ID=cds-RUP92163.1;Parent=gene-D8M19_09075;Dbxref=NCBI_GP:RUP92163.1;Name=RUP92163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297104.1;locus_tag=D8M19_09075;product=hydrolase;protein_id=RUP92163.1;transl_table=11 RBLY01000008.1 Genbank gene 68909 69502 . - . ID=gene-D8M19_09080;Name=D8M19_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09080 RBLY01000008.1 Protein Homology CDS 68909 69502 . - 0 ID=cds-RUP92164.1;Parent=gene-D8M19_09080;Dbxref=NCBI_GP:RUP92164.1;Name=RUP92164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324468.1;locus_tag=D8M19_09080;product=peptidoglycan endopeptidase;protein_id=RUP92164.1;transl_table=11 RBLY01000008.1 Genbank gene 70204 71829 . - . ID=gene-D8M19_09085;Name=D8M19_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09085 RBLY01000008.1 Protein Homology CDS 70204 71829 . - 0 ID=cds-RUP92165.1;Parent=gene-D8M19_09085;Dbxref=NCBI_GP:RUP92165.1;Name=RUP92165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120477.1;locus_tag=D8M19_09085;product=cytochrome bc complex cytochrome b subunit;protein_id=RUP92165.1;transl_table=11 RBLY01000008.1 Genbank gene 71829 73049 . - . ID=gene-D8M19_09090;Name=D8M19_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09090 RBLY01000008.1 Protein Homology CDS 71829 73049 . - 0 ID=cds-RUP92166.1;Parent=gene-D8M19_09090;Dbxref=NCBI_GP:RUP92166.1;Name=RUP92166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278354.1;locus_tag=D8M19_09090;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=RUP92166.1;transl_table=11 RBLY01000008.1 Genbank gene 73049 73942 . - . ID=gene-D8M19_09095;Name=D8M19_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09095 RBLY01000008.1 Protein Homology CDS 73049 73942 . - 0 ID=cds-RUP92167.1;Parent=gene-D8M19_09095;Dbxref=NCBI_GP:RUP92167.1;Name=RUP92167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005324465.1;locus_tag=D8M19_09095;product=cytochrome C;protein_id=RUP92167.1;transl_table=11 RBLY01000008.1 Genbank gene 74007 74621 . - . ID=gene-D8M19_09100;Name=D8M19_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09100 RBLY01000008.1 Protein Homology CDS 74007 74621 . - 0 ID=cds-RUP92190.1;Parent=gene-D8M19_09100;Dbxref=NCBI_GP:RUP92190.1;Name=RUP92190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011014948.1;locus_tag=D8M19_09100;product=heme-copper oxidase subunit III;protein_id=RUP92190.1;transl_table=11 RBLY01000008.1 Genbank gene 75151 75582 . - . ID=gene-D8M19_09105;Name=D8M19_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09105 RBLY01000008.1 Protein Homology CDS 75151 75582 . - 0 ID=cds-RUP92168.1;Parent=gene-D8M19_09105;Dbxref=NCBI_GP:RUP92168.1;Name=RUP92168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005328946.1;locus_tag=D8M19_09105;product=cytochrome C oxidase subunit IV;protein_id=RUP92168.1;transl_table=11 RBLY01000008.1 Genbank gene 75603 76694 . - . ID=gene-D8M19_09110;Name=D8M19_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09110 RBLY01000008.1 Protein Homology CDS 75603 76694 . - 0 ID=cds-RUP92169.1;Parent=gene-D8M19_09110;Dbxref=NCBI_GP:RUP92169.1;Name=RUP92169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120472.1;locus_tag=D8M19_09110;product=cytochrome c oxidase subunit II;protein_id=RUP92169.1;transl_table=11 RBLY01000008.1 Genbank gene 77118 79040 . + . ID=gene-D8M19_09115;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=D8M19_09115 RBLY01000008.1 Protein Homology CDS 77118 79040 . + 0 ID=cds-RUP92170.1;Parent=gene-D8M19_09115;Dbxref=NCBI_GP:RUP92170.1;Name=RUP92170.1;gbkey=CDS;gene=asnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_601400.1;locus_tag=D8M19_09115;product=asparagine synthase (glutamine-hydrolyzing);protein_id=RUP92170.1;transl_table=11 RBLY01000008.1 Genbank gene 79186 79530 . - . ID=gene-D8M19_09120;Name=D8M19_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09120 RBLY01000008.1 Protein Homology CDS 79186 79530 . - 0 ID=cds-RUP92171.1;Parent=gene-D8M19_09120;Dbxref=NCBI_GP:RUP92171.1;Name=RUP92171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845178.1;locus_tag=D8M19_09120;product=iron-sulfur cluster assembly accessory protein;protein_id=RUP92171.1;transl_table=11 RBLY01000008.1 Genbank gene 79726 80481 . + . ID=gene-D8M19_09125;Name=D8M19_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09125 RBLY01000008.1 Protein Homology CDS 79726 80481 . + 0 ID=cds-RUP92172.1;Parent=gene-D8M19_09125;Dbxref=NCBI_GP:RUP92172.1;Name=RUP92172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120469.1;locus_tag=D8M19_09125;product=DUF3043 domain-containing protein;protein_id=RUP92172.1;transl_table=11 RBLY01000008.1 Genbank gene 80538 81686 . + . ID=gene-D8M19_09130;Name=D8M19_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09130 RBLY01000008.1 Protein Homology CDS 80538 81686 . + 0 ID=cds-RUP92173.1;Parent=gene-D8M19_09130;Dbxref=NCBI_GP:RUP92173.1;Name=RUP92173.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02277.15;locus_tag=D8M19_09130;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=RUP92173.1;transl_table=11 RBLY01000008.1 Genbank gene 81669 82757 . - . ID=gene-D8M19_09135;Name=D8M19_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09135 RBLY01000008.1 Protein Homology CDS 81669 82757 . - 0 ID=cds-RUP92174.1;Parent=gene-D8M19_09135;Dbxref=NCBI_GP:RUP92174.1;Name=RUP92174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120467.1;locus_tag=D8M19_09135;product=branched-chain amino acid aminotransferase;protein_id=RUP92174.1;transl_table=11 RBLY01000008.1 Genbank gene 82907 84457 . + . ID=gene-D8M19_09140;Name=D8M19_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09140 RBLY01000008.1 Protein Homology CDS 82907 84457 . + 0 ID=cds-RUP92175.1;Parent=gene-D8M19_09140;Dbxref=NCBI_GP:RUP92175.1;Name=RUP92175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120466.1;locus_tag=D8M19_09140;product=leucyl aminopeptidase;protein_id=RUP92175.1;transl_table=11 RBLY01000008.1 Genbank gene 84454 84846 . - . ID=gene-D8M19_09145;Name=D8M19_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09145 RBLY01000008.1 Protein Homology CDS 84454 84846 . - 0 ID=cds-RUP92176.1;Parent=gene-D8M19_09145;Dbxref=NCBI_GP:RUP92176.1;Name=RUP92176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120465.1;locus_tag=D8M19_09145;product=oxidoreductase;protein_id=RUP92176.1;transl_table=11 RBLY01000008.1 Genbank gene 84973 87117 . + . ID=gene-D8M19_09150;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=D8M19_09150 RBLY01000008.1 Protein Homology CDS 84973 87117 . + 0 ID=cds-RUP92177.1;Parent=gene-D8M19_09150;Dbxref=NCBI_GP:RUP92177.1;Name=RUP92177.1;gbkey=CDS;gene=sucB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120464.1;locus_tag=D8M19_09150;product=2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase;protein_id=RUP92177.1;transl_table=11 RBLY01000008.1 Genbank gene 87438 88616 . + . ID=gene-D8M19_09155;Name=D8M19_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09155 RBLY01000008.1 Protein Homology CDS 87438 88616 . + 0 ID=cds-RUP92191.1;Parent=gene-D8M19_09155;Dbxref=NCBI_GP:RUP92191.1;Name=RUP92191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120463.1;locus_tag=D8M19_09155;product=MFS transporter;protein_id=RUP92191.1;transl_table=11 RBLY01000008.1 Genbank gene 88662 89423 . + . ID=gene-D8M19_09160;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=D8M19_09160 RBLY01000008.1 Protein Homology CDS 88662 89423 . + 0 ID=cds-RUP92192.1;Parent=gene-D8M19_09160;Dbxref=NCBI_GP:RUP92192.1;Name=RUP92192.1;gbkey=CDS;gene=lipB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120462.1;locus_tag=D8M19_09160;product=lipoyl(octanoyl) transferase LipB;protein_id=RUP92192.1;transl_table=11 RBLY01000008.1 Genbank gene 89478 90521 . + . ID=gene-D8M19_09165;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=D8M19_09165 RBLY01000008.1 Protein Homology CDS 89478 90521 . + 0 ID=cds-RUP92178.1;Parent=gene-D8M19_09165;Dbxref=NCBI_GP:RUP92178.1;Name=RUP92178.1;gbkey=CDS;gene=lipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839908.1;locus_tag=D8M19_09165;product=lipoyl synthase;protein_id=RUP92178.1;transl_table=11 RBLY01000008.1 Genbank gene 90718 91497 . + . ID=gene-D8M19_09170;Name=D8M19_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09170 RBLY01000008.1 Protein Homology CDS 90718 91497 . + 0 ID=cds-RUP92179.1;Parent=gene-D8M19_09170;Dbxref=NCBI_GP:RUP92179.1;Name=RUP92179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003849048.1;locus_tag=D8M19_09170;product=DUF4191 domain-containing protein;protein_id=RUP92179.1;transl_table=11 RBLY01000008.1 Genbank gene 91504 91992 . - . ID=gene-D8M19_09175;Name=D8M19_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09175 RBLY01000008.1 Protein Homology CDS 91504 91992 . - 0 ID=cds-RUP92180.1;Parent=gene-D8M19_09175;Dbxref=NCBI_GP:RUP92180.1;Name=RUP92180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120459.1;locus_tag=D8M19_09175;product=RDD family protein;protein_id=RUP92180.1;transl_table=11 RBLY01000008.1 Genbank gene 92105 93037 . - . ID=gene-D8M19_09180;Name=D8M19_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09180 RBLY01000008.1 Protein Homology CDS 92105 93037 . - 0 ID=cds-RUP92181.1;Parent=gene-D8M19_09180;Dbxref=NCBI_GP:RUP92181.1;Name=RUP92181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00657.20;locus_tag=D8M19_09180;product=SGNH/GDSL hydrolase family protein;protein_id=RUP92181.1;transl_table=11 RBLY01000008.1 Genbank gene 93030 93569 . - . ID=gene-D8M19_09185;Name=D8M19_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09185 RBLY01000008.1 Protein Homology CDS 93030 93569 . - 0 ID=cds-RUP92182.1;Parent=gene-D8M19_09185;Dbxref=NCBI_GP:RUP92182.1;Name=RUP92182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120457.1;locus_tag=D8M19_09185;product=NUDIX domain-containing protein;protein_id=RUP92182.1;transl_table=11 RBLY01000008.1 Genbank gene 93588 94565 . - . ID=gene-D8M19_09190;Name=D8M19_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09190 RBLY01000008.1 Protein Homology CDS 93588 94565 . - 0 ID=cds-RUP92183.1;Parent=gene-D8M19_09190;Dbxref=NCBI_GP:RUP92183.1;Name=RUP92183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00089.24;locus_tag=D8M19_09190;product=trypsin;protein_id=RUP92183.1;transl_table=11 RBLY01000008.1 Genbank gene 94694 96151 . - . ID=gene-D8M19_09195;Name=D8M19_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09195 RBLY01000008.1 Protein Homology CDS 94694 96151 . - 0 ID=cds-RUP92193.1;Parent=gene-D8M19_09195;Dbxref=NCBI_GP:RUP92193.1;Name=RUP92193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006822068.1;locus_tag=D8M19_09195;product=threonine synthase;protein_id=RUP92193.1;transl_table=11 RBLY01000008.1 Genbank gene 96328 97668 . + . ID=gene-D8M19_09200;Name=D8M19_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09200 RBLY01000008.1 Protein Homology CDS 96328 97668 . + 0 ID=cds-RUP92184.1;Parent=gene-D8M19_09200;Dbxref=NCBI_GP:RUP92184.1;Name=RUP92184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018120454.1;locus_tag=D8M19_09200;product=MFS transporter;protein_id=RUP92184.1;transl_table=11 RBLY01000008.1 Genbank gene 97649 97987 . + . ID=gene-D8M19_09205;Name=D8M19_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09205 RBLY01000008.1 GeneMarkS+ CDS 97649 97987 . + 0 ID=cds-RUP92185.1;Parent=gene-D8M19_09205;Dbxref=NCBI_GP:RUP92185.1;Name=RUP92185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09205;product=hypothetical protein;protein_id=RUP92185.1;transl_table=11 ##sequence-region RBLY01000009.1 1 72964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=37637 RBLY01000009.1 Genbank region 1 72964 . + . ID=RBLY01000009.1:1..72964;Dbxref=taxon:37637;country=USA: Wisconsin;gbkey=Src;isolation-source=nasal lavage;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HSID17575 RBLY01000009.1 Genbank gene 194 1387 . - . ID=gene-D8M19_09210;Name=D8M19_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09210 RBLY01000009.1 Protein Homology CDS 194 1387 . - 0 ID=cds-RUP92012.1;Parent=gene-D8M19_09210;Dbxref=NCBI_GP:RUP92012.1;Name=RUP92012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121350.1;locus_tag=D8M19_09210;product=o-succinylbenzoate--CoA ligase;protein_id=RUP92012.1;transl_table=11 RBLY01000009.1 Genbank gene 1494 2513 . - . ID=gene-D8M19_09215;Name=D8M19_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09215 RBLY01000009.1 Protein Homology CDS 1494 2513 . - 0 ID=cds-RUP92013.1;Parent=gene-D8M19_09215;Dbxref=NCBI_GP:RUP92013.1;Name=RUP92013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121349.1;locus_tag=D8M19_09215;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=RUP92013.1;transl_table=11 RBLY01000009.1 Genbank gene 2619 3695 . + . ID=gene-D8M19_09220;Name=D8M19_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09220 RBLY01000009.1 Protein Homology CDS 2619 3695 . + 0 ID=cds-RUP92082.1;Parent=gene-D8M19_09220;Dbxref=NCBI_GP:RUP92082.1;Name=RUP92082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599711.1;locus_tag=D8M19_09220;product=O-succinylbenzoate synthase;protein_id=RUP92082.1;transl_table=11 RBLY01000009.1 Genbank gene 3802 6315 . + . ID=gene-D8M19_09225;Name=D8M19_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09225 RBLY01000009.1 Protein Homology CDS 3802 6315 . + 0 ID=cds-RUP92083.1;Parent=gene-D8M19_09225;Dbxref=NCBI_GP:RUP92083.1;Name=RUP92083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399896.1;locus_tag=D8M19_09225;product=excinuclease ABC subunit UvrA;protein_id=RUP92083.1;transl_table=11 RBLY01000009.1 Genbank gene 6352 7119 . + . ID=gene-D8M19_09230;Name=D8M19_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09230 RBLY01000009.1 GeneMarkS+ CDS 6352 7119 . + 0 ID=cds-RUP92014.1;Parent=gene-D8M19_09230;Dbxref=NCBI_GP:RUP92014.1;Name=RUP92014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09230;product=hypothetical protein;protein_id=RUP92014.1;transl_table=11 RBLY01000009.1 Genbank gene 7257 9020 . + . ID=gene-D8M19_09235;Name=D8M19_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09235 RBLY01000009.1 Protein Homology CDS 7257 9020 . + 0 ID=cds-RUP92015.1;Parent=gene-D8M19_09235;Dbxref=NCBI_GP:RUP92015.1;Name=RUP92015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121345.1;locus_tag=D8M19_09235;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=RUP92015.1;transl_table=11 RBLY01000009.1 Genbank gene 9153 9605 . + . ID=gene-D8M19_09240;Name=D8M19_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09240 RBLY01000009.1 Protein Homology CDS 9153 9605 . + 0 ID=cds-RUP92084.1;Parent=gene-D8M19_09240;Dbxref=NCBI_GP:RUP92084.1;Name=RUP92084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018021337.1;locus_tag=D8M19_09240;product=DUF3592 domain-containing protein;protein_id=RUP92084.1;transl_table=11 RBLY01000009.1 Genbank gene 9612 10874 . + . ID=gene-D8M19_09245;Name=D8M19_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09245 RBLY01000009.1 Protein Homology CDS 9612 10874 . + 0 ID=cds-RUP92016.1;Parent=gene-D8M19_09245;Dbxref=NCBI_GP:RUP92016.1;Name=RUP92016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121343.1;locus_tag=D8M19_09245;product=glycosyltransferase family 1 protein;protein_id=RUP92016.1;transl_table=11 RBLY01000009.1 Genbank gene 10884 11699 . + . ID=gene-D8M19_09250;Name=D8M19_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09250 RBLY01000009.1 Protein Homology CDS 10884 11699 . + 0 ID=cds-RUP92017.1;Parent=gene-D8M19_09250;Dbxref=NCBI_GP:RUP92017.1;Name=RUP92017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121342.1;locus_tag=D8M19_09250;product=demethylmenaquinone methyltransferase;protein_id=RUP92017.1;transl_table=11 RBLY01000009.1 Genbank gene 11898 12209 . + . ID=gene-D8M19_09255;Name=D8M19_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09255 RBLY01000009.1 GeneMarkS+ CDS 11898 12209 . + 0 ID=cds-RUP92018.1;Parent=gene-D8M19_09255;Dbxref=NCBI_GP:RUP92018.1;Name=RUP92018.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09255;product=hypothetical protein;protein_id=RUP92018.1;transl_table=11 RBLY01000009.1 Genbank gene 12318 13667 . - . ID=gene-D8M19_09260;Name=D8M19_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09260 RBLY01000009.1 Protein Homology CDS 12318 13667 . - 0 ID=cds-RUP92085.1;Parent=gene-D8M19_09260;Dbxref=NCBI_GP:RUP92085.1;Name=RUP92085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018581589.1;locus_tag=D8M19_09260;product=geranylgeranyl reductase family protein;protein_id=RUP92085.1;transl_table=11 RBLY01000009.1 Genbank gene 13862 14878 . + . ID=gene-D8M19_09265;Name=D8M19_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09265 RBLY01000009.1 Protein Homology CDS 13862 14878 . + 0 ID=cds-RUP92019.1;Parent=gene-D8M19_09265;Dbxref=NCBI_GP:RUP92019.1;Name=RUP92019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005327943.1;locus_tag=D8M19_09265;product=polyprenyl synthetase family protein;protein_id=RUP92019.1;transl_table=11 RBLY01000009.1 Genbank gene 15015 15096 . + . ID=gene-D8M19_09270;Name=D8M19_09270;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09270 RBLY01000009.1 tRNAscan-SE tRNA 15015 15096 . + . ID=rna-D8M19_09270;Parent=gene-D8M19_09270;anticodon=(pos:15049..15051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09270;product=tRNA-Tyr RBLY01000009.1 tRNAscan-SE exon 15015 15096 . + . ID=exon-D8M19_09270-1;Parent=rna-D8M19_09270;anticodon=(pos:15049..15051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09270;product=tRNA-Tyr RBLY01000009.1 Genbank gene 15337 16413 . - . ID=gene-D8M19_09275;Name=D8M19_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09275 RBLY01000009.1 Protein Homology CDS 15337 16413 . - 0 ID=cds-RUP92020.1;Parent=gene-D8M19_09275;Dbxref=NCBI_GP:RUP92020.1;Name=RUP92020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005325797.1;locus_tag=D8M19_09275;product=LysR family transcriptional regulator;protein_id=RUP92020.1;transl_table=11 RBLY01000009.1 Genbank gene 16412 17398 . + . ID=gene-D8M19_09280;Name=D8M19_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09280 RBLY01000009.1 Protein Homology CDS 16412 17398 . + 0 ID=cds-RUP92021.1;Parent=gene-D8M19_09280;Dbxref=NCBI_GP:RUP92021.1;Name=RUP92021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121337.1;locus_tag=D8M19_09280;product=tellurite resistance protein;protein_id=RUP92021.1;transl_table=11 RBLY01000009.1 Genbank gene 17722 17794 . + . ID=gene-D8M19_09285;Name=D8M19_09285;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09285 RBLY01000009.1 tRNAscan-SE tRNA 17722 17794 . + . ID=rna-D8M19_09285;Parent=gene-D8M19_09285;anticodon=(pos:17755..17757);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09285;product=tRNA-Thr RBLY01000009.1 tRNAscan-SE exon 17722 17794 . + . ID=exon-D8M19_09285-1;Parent=rna-D8M19_09285;anticodon=(pos:17755..17757);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09285;product=tRNA-Thr RBLY01000009.1 Genbank gene 17838 17909 . + . ID=gene-D8M19_09290;Name=D8M19_09290;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09290 RBLY01000009.1 tRNAscan-SE tRNA 17838 17909 . + . ID=rna-D8M19_09290;Parent=gene-D8M19_09290;anticodon=(pos:17870..17872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09290;product=tRNA-Met RBLY01000009.1 tRNAscan-SE exon 17838 17909 . + . ID=exon-D8M19_09290-1;Parent=rna-D8M19_09290;anticodon=(pos:17870..17872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09290;product=tRNA-Met RBLY01000009.1 Genbank gene 18029 18104 . + . ID=gene-D8M19_09295;Name=D8M19_09295;gbkey=Gene;gene_biotype=tRNA;locus_tag=D8M19_09295 RBLY01000009.1 tRNAscan-SE tRNA 18029 18104 . + . ID=rna-D8M19_09295;Parent=gene-D8M19_09295;anticodon=(pos:18062..18064);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09295;product=tRNA-Trp RBLY01000009.1 tRNAscan-SE exon 18029 18104 . + . ID=exon-D8M19_09295-1;Parent=rna-D8M19_09295;anticodon=(pos:18062..18064);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=D8M19_09295;product=tRNA-Trp RBLY01000009.1 Genbank gene 18160 18492 . + . ID=gene-D8M19_09300;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=D8M19_09300 RBLY01000009.1 Protein Homology CDS 18160 18492 . + 0 ID=cds-RUP92022.1;Parent=gene-D8M19_09300;Dbxref=NCBI_GP:RUP92022.1;Name=RUP92022.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189725.1;locus_tag=D8M19_09300;product=preprotein translocase subunit SecE;protein_id=RUP92022.1;transl_table=11 RBLY01000009.1 Genbank gene 18614 19549 . + . ID=gene-D8M19_09305;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=D8M19_09305 RBLY01000009.1 Protein Homology CDS 18614 19549 . + 0 ID=cds-RUP92023.1;Parent=gene-D8M19_09305;Dbxref=NCBI_GP:RUP92023.1;Name=RUP92023.1;gbkey=CDS;gene=nusG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121335.1;locus_tag=D8M19_09305;product=transcription termination/antitermination protein NusG;protein_id=RUP92023.1;transl_table=11 RBLY01000009.1 Genbank gene 19759 20208 . + . ID=gene-D8M19_09310;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=D8M19_09310 RBLY01000009.1 Protein Homology CDS 19759 20208 . + 0 ID=cds-RUP92024.1;Parent=gene-D8M19_09310;Dbxref=NCBI_GP:RUP92024.1;Name=RUP92024.1;gbkey=CDS;gene=rplK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848036.1;locus_tag=D8M19_09310;product=50S ribosomal protein L11;protein_id=RUP92024.1;transl_table=11 RBLY01000009.1 Genbank gene 20365 21075 . + . ID=gene-D8M19_09315;Name=D8M19_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09315 RBLY01000009.1 Protein Homology CDS 20365 21075 . + 0 ID=cds-RUP92025.1;Parent=gene-D8M19_09315;Dbxref=NCBI_GP:RUP92025.1;Name=RUP92025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014302896.1;locus_tag=D8M19_09315;product=50S ribosomal protein L1;protein_id=RUP92025.1;transl_table=11 RBLY01000009.1 Genbank gene 21305 21769 . + . ID=gene-D8M19_09320;Name=D8M19_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09320 RBLY01000009.1 Protein Homology CDS 21305 21769 . + 0 ID=cds-RUP92026.1;Parent=gene-D8M19_09320;Dbxref=NCBI_GP:RUP92026.1;Name=RUP92026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121332.1;locus_tag=D8M19_09320;product=DUF454 domain-containing protein;protein_id=RUP92026.1;transl_table=11 RBLY01000009.1 Genbank gene 21814 23358 . + . ID=gene-D8M19_09325;Name=D8M19_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09325 RBLY01000009.1 Protein Homology CDS 21814 23358 . + 0 ID=cds-RUP92027.1;Parent=gene-D8M19_09325;Dbxref=NCBI_GP:RUP92027.1;Name=RUP92027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005326258.1;locus_tag=D8M19_09325;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=RUP92027.1;transl_table=11 RBLY01000009.1 Genbank gene 23656 24177 . + . ID=gene-D8M19_09330;Name=D8M19_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09330 RBLY01000009.1 Protein Homology CDS 23656 24177 . + 0 ID=cds-RUP92028.1;Parent=gene-D8M19_09330;Dbxref=NCBI_GP:RUP92028.1;Name=RUP92028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121330.1;locus_tag=D8M19_09330;product=50S ribosomal protein L10;protein_id=RUP92028.1;transl_table=11 RBLY01000009.1 Genbank gene 24328 24714 . + . ID=gene-D8M19_09335;Name=D8M19_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09335 RBLY01000009.1 Protein Homology CDS 24328 24714 . + 0 ID=cds-RUP92029.1;Parent=gene-D8M19_09335;Dbxref=NCBI_GP:RUP92029.1;Name=RUP92029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006770269.1;locus_tag=D8M19_09335;product=50S ribosomal protein L7/L12;protein_id=RUP92029.1;transl_table=11 RBLY01000009.1 Genbank pseudogene 24864 26185 . - . ID=gene-D8M19_09340;Name=D8M19_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09340;pseudo=true RBLY01000009.1 Protein Homology CDS 24864 26185 . - 0 ID=cds-D8M19_09340;Parent=gene-D8M19_09340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005388352.1;locus_tag=D8M19_09340;product=ATP-binding protein;pseudo=true;transl_table=11 RBLY01000009.1 Genbank gene 26534 27073 . + . ID=gene-D8M19_09345;Name=D8M19_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09345 RBLY01000009.1 Protein Homology CDS 26534 27073 . + 0 ID=cds-RUP92030.1;Parent=gene-D8M19_09345;Dbxref=NCBI_GP:RUP92030.1;Name=RUP92030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121327.1;locus_tag=D8M19_09345;product=hypothetical protein;protein_id=RUP92030.1;transl_table=11 RBLY01000009.1 Genbank gene 27180 28250 . + . ID=gene-D8M19_09350;Name=D8M19_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09350 RBLY01000009.1 Protein Homology CDS 27180 28250 . + 0 ID=cds-RUP92031.1;Parent=gene-D8M19_09350;Dbxref=NCBI_GP:RUP92031.1;Name=RUP92031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11271.6;locus_tag=D8M19_09350;product=DUF3068 domain-containing protein;protein_id=RUP92031.1;transl_table=11 RBLY01000009.1 Genbank gene 28524 32018 . + . ID=gene-D8M19_09355;Name=D8M19_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09355 RBLY01000009.1 Protein Homology CDS 28524 32018 . + 0 ID=cds-RUP92032.1;Parent=gene-D8M19_09355;Dbxref=NCBI_GP:RUP92032.1;Name=RUP92032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005322877.1;locus_tag=D8M19_09355;product=DNA-directed RNA polymerase subunit beta;protein_id=RUP92032.1;transl_table=11 RBLY01000009.1 Genbank gene 32102 36097 . + . ID=gene-D8M19_09360;Name=D8M19_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09360 RBLY01000009.1 Protein Homology CDS 32102 36097 . + 0 ID=cds-RUP92033.1;Parent=gene-D8M19_09360;Dbxref=NCBI_GP:RUP92033.1;Name=RUP92033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121324.1;locus_tag=D8M19_09360;product=DNA-directed RNA polymerase subunit beta';protein_id=RUP92033.1;transl_table=11 RBLY01000009.1 Genbank gene 36444 37067 . + . ID=gene-D8M19_09365;Name=D8M19_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09365 RBLY01000009.1 Protein Homology CDS 36444 37067 . + 0 ID=cds-RUP92034.1;Parent=gene-D8M19_09365;Dbxref=NCBI_GP:RUP92034.1;Name=RUP92034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121323.1;locus_tag=D8M19_09365;product=hypothetical protein;protein_id=RUP92034.1;transl_table=11 RBLY01000009.1 Genbank gene 37128 38540 . + . ID=gene-D8M19_09370;Name=D8M19_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09370 RBLY01000009.1 Protein Homology CDS 37128 38540 . + 0 ID=cds-RUP92035.1;Parent=gene-D8M19_09370;Dbxref=NCBI_GP:RUP92035.1;Name=RUP92035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121322.1;locus_tag=D8M19_09370;product=ABC transporter ATP-binding protein;protein_id=RUP92035.1;transl_table=11 RBLY01000009.1 Genbank gene 38542 39345 . + . ID=gene-D8M19_09375;Name=D8M19_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09375 RBLY01000009.1 Protein Homology CDS 38542 39345 . + 0 ID=cds-RUP92036.1;Parent=gene-D8M19_09375;Dbxref=NCBI_GP:RUP92036.1;Name=RUP92036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848057.1;locus_tag=D8M19_09375;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=RUP92036.1;transl_table=11 RBLY01000009.1 Genbank gene 39800 40168 . + . ID=gene-D8M19_09380;Name=D8M19_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09380 RBLY01000009.1 Protein Homology CDS 39800 40168 . + 0 ID=cds-RUP92037.1;Parent=gene-D8M19_09380;Dbxref=NCBI_GP:RUP92037.1;Name=RUP92037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297794.1;locus_tag=D8M19_09380;product=30S ribosomal protein S12;protein_id=RUP92037.1;transl_table=11 RBLY01000009.1 Genbank gene 40175 40642 . + . ID=gene-D8M19_09385;Name=D8M19_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09385 RBLY01000009.1 Protein Homology CDS 40175 40642 . + 0 ID=cds-RUP92038.1;Parent=gene-D8M19_09385;Dbxref=NCBI_GP:RUP92038.1;Name=RUP92038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016458991.1;locus_tag=D8M19_09385;product=30S ribosomal protein S7;protein_id=RUP92038.1;transl_table=11 RBLY01000009.1 Genbank gene 40941 43073 . + . ID=gene-D8M19_09390;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=D8M19_09390 RBLY01000009.1 Protein Homology CDS 40941 43073 . + 0 ID=cds-RUP92039.1;Parent=gene-D8M19_09390;Dbxref=NCBI_GP:RUP92039.1;Name=RUP92039.1;gbkey=CDS;gene=fusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121317.1;locus_tag=D8M19_09390;product=elongation factor G;protein_id=RUP92039.1;transl_table=11 RBLY01000009.1 Genbank gene 43555 44745 . + . ID=gene-D8M19_09395;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=D8M19_09395 RBLY01000009.1 Protein Homology CDS 43555 44745 . + 0 ID=cds-RUP92040.1;Parent=gene-D8M19_09395;Dbxref=NCBI_GP:RUP92040.1;Name=RUP92040.1;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189688.1;locus_tag=D8M19_09395;product=elongation factor Tu;protein_id=RUP92040.1;transl_table=11 RBLY01000009.1 Genbank pseudogene 45164 45988 . - . ID=gene-D8M19_09400;Name=D8M19_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=D8M19_09400;pseudo=true RBLY01000009.1 Protein Homology CDS 45164 45988 . - 0 ID=cds-D8M19_09400;Parent=gene-D8M19_09400;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329391.1;locus_tag=D8M19_09400;product=hypothetical protein;pseudo=true;transl_table=11 RBLY01000009.1 Genbank gene 46194 46757 . - . ID=gene-D8M19_09405;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=D8M19_09405 RBLY01000009.1 Protein Homology CDS 46194 46757 . - 0 ID=cds-RUP92041.1;Parent=gene-D8M19_09405;Dbxref=NCBI_GP:RUP92041.1;Name=RUP92041.1;gbkey=CDS;gene=amaP;inference=COORDINATES: protein motif:HMM:NF033218.1;locus_tag=D8M19_09405;product=alkaline shock response membrane anchor protein AmaP;protein_id=RUP92041.1;transl_table=11 RBLY01000009.1 Genbank gene 46754 47311 . - . ID=gene-D8M19_09410;Name=D8M19_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09410 RBLY01000009.1 Protein Homology CDS 46754 47311 . - 0 ID=cds-RUP92042.1;Parent=gene-D8M19_09410;Dbxref=NCBI_GP:RUP92042.1;Name=RUP92042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121313.1;locus_tag=D8M19_09410;product=hypothetical protein;protein_id=RUP92042.1;transl_table=11 RBLY01000009.1 Genbank gene 47304 48695 . - . ID=gene-D8M19_09415;Name=D8M19_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09415 RBLY01000009.1 GeneMarkS+ CDS 47304 48695 . - 0 ID=cds-RUP92043.1;Parent=gene-D8M19_09415;Dbxref=NCBI_GP:RUP92043.1;Name=RUP92043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09415;product=Asp23/Gls24 family envelope stress response protein;protein_id=RUP92043.1;transl_table=11 RBLY01000009.1 Genbank gene 48695 48883 . - . ID=gene-D8M19_09420;Name=D8M19_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09420 RBLY01000009.1 Protein Homology CDS 48695 48883 . - 0 ID=cds-RUP92044.1;Parent=gene-D8M19_09420;Dbxref=NCBI_GP:RUP92044.1;Name=RUP92044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399926.1;locus_tag=D8M19_09420;product=hypothetical protein;protein_id=RUP92044.1;transl_table=11 RBLY01000009.1 Genbank gene 48907 49245 . - . ID=gene-D8M19_09425;Name=D8M19_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09425 RBLY01000009.1 GeneMarkS+ CDS 48907 49245 . - 0 ID=cds-RUP92045.1;Parent=gene-D8M19_09425;Dbxref=NCBI_GP:RUP92045.1;Name=RUP92045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09425;product=hypothetical protein;protein_id=RUP92045.1;transl_table=11 RBLY01000009.1 Genbank gene 49248 49724 . - . ID=gene-D8M19_09430;Name=D8M19_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09430 RBLY01000009.1 Protein Homology CDS 49248 49724 . - 0 ID=cds-RUP92046.1;Parent=gene-D8M19_09430;Dbxref=NCBI_GP:RUP92046.1;Name=RUP92046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121309.1;locus_tag=D8M19_09430;product=Asp23/Gls24 family envelope stress response protein;protein_id=RUP92046.1;transl_table=11 RBLY01000009.1 Genbank gene 50485 50790 . + . ID=gene-D8M19_09435;Name=D8M19_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09435 RBLY01000009.1 Protein Homology CDS 50485 50790 . + 0 ID=cds-RUP92047.1;Parent=gene-D8M19_09435;Dbxref=NCBI_GP:RUP92047.1;Name=RUP92047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009948626.1;locus_tag=D8M19_09435;product=30S ribosomal protein S10;protein_id=RUP92047.1;transl_table=11 RBLY01000009.1 Genbank gene 50845 51495 . + . ID=gene-D8M19_09440;Name=D8M19_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09440 RBLY01000009.1 Protein Homology CDS 50845 51495 . + 0 ID=cds-RUP92048.1;Parent=gene-D8M19_09440;Dbxref=NCBI_GP:RUP92048.1;Name=RUP92048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189651.1;locus_tag=D8M19_09440;product=50S ribosomal protein L3;protein_id=RUP92048.1;transl_table=11 RBLY01000009.1 Genbank gene 51498 52157 . + . ID=gene-D8M19_09445;Name=D8M19_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09445 RBLY01000009.1 Protein Homology CDS 51498 52157 . + 0 ID=cds-RUP92049.1;Parent=gene-D8M19_09445;Dbxref=NCBI_GP:RUP92049.1;Name=RUP92049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015650389.1;locus_tag=D8M19_09445;product=50S ribosomal protein L4;protein_id=RUP92049.1;transl_table=11 RBLY01000009.1 Genbank gene 52159 52461 . + . ID=gene-D8M19_09450;Name=D8M19_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09450 RBLY01000009.1 Protein Homology CDS 52159 52461 . + 0 ID=cds-RUP92050.1;Parent=gene-D8M19_09450;Dbxref=NCBI_GP:RUP92050.1;Name=RUP92050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018340299.1;locus_tag=D8M19_09450;product=50S ribosomal protein L23;protein_id=RUP92050.1;transl_table=11 RBLY01000009.1 Genbank gene 52486 53322 . + . ID=gene-D8M19_09455;Name=D8M19_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09455 RBLY01000009.1 Protein Homology CDS 52486 53322 . + 0 ID=cds-RUP92051.1;Parent=gene-D8M19_09455;Dbxref=NCBI_GP:RUP92051.1;Name=RUP92051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189648.1;locus_tag=D8M19_09455;product=50S ribosomal protein L2;protein_id=RUP92051.1;transl_table=11 RBLY01000009.1 Genbank gene 53339 53614 . + . ID=gene-D8M19_09460;Name=D8M19_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09460 RBLY01000009.1 Protein Homology CDS 53339 53614 . + 0 ID=cds-RUP92052.1;Parent=gene-D8M19_09460;Dbxref=NCBI_GP:RUP92052.1;Name=RUP92052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006839436.1;locus_tag=D8M19_09460;product=30S ribosomal protein S19;protein_id=RUP92052.1;transl_table=11 RBLY01000009.1 Genbank gene 53618 53980 . + . ID=gene-D8M19_09465;Name=D8M19_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09465 RBLY01000009.1 Protein Homology CDS 53618 53980 . + 0 ID=cds-RUP92053.1;Parent=gene-D8M19_09465;Dbxref=NCBI_GP:RUP92053.1;Name=RUP92053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018118340.1;locus_tag=D8M19_09465;product=50S ribosomal protein L22;protein_id=RUP92053.1;transl_table=11 RBLY01000009.1 Genbank gene 53981 54718 . + . ID=gene-D8M19_09470;Name=D8M19_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09470 RBLY01000009.1 Protein Homology CDS 53981 54718 . + 0 ID=cds-RUP92054.1;Parent=gene-D8M19_09470;Dbxref=NCBI_GP:RUP92054.1;Name=RUP92054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599754.1;locus_tag=D8M19_09470;product=30S ribosomal protein S3;protein_id=RUP92054.1;transl_table=11 RBLY01000009.1 Genbank gene 54722 55138 . + . ID=gene-D8M19_09475;Name=D8M19_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09475 RBLY01000009.1 Protein Homology CDS 54722 55138 . + 0 ID=cds-RUP92055.1;Parent=gene-D8M19_09475;Dbxref=NCBI_GP:RUP92055.1;Name=RUP92055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599755.1;locus_tag=D8M19_09475;product=50S ribosomal protein L16;protein_id=RUP92055.1;transl_table=11 RBLY01000009.1 Genbank gene 55138 55368 . + . ID=gene-D8M19_09480;Name=D8M19_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09480 RBLY01000009.1 Protein Homology CDS 55138 55368 . + 0 ID=cds-RUP92056.1;Parent=gene-D8M19_09480;Dbxref=NCBI_GP:RUP92056.1;Name=RUP92056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599756.1;locus_tag=D8M19_09480;product=50S ribosomal protein L29;protein_id=RUP92056.1;transl_table=11 RBLY01000009.1 Genbank gene 55371 55679 . + . ID=gene-D8M19_09485;Name=D8M19_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09485 RBLY01000009.1 Protein Homology CDS 55371 55679 . + 0 ID=cds-RUP92057.1;Parent=gene-D8M19_09485;Dbxref=NCBI_GP:RUP92057.1;Name=RUP92057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399938.1;locus_tag=D8M19_09485;product=30S ribosomal protein S17;protein_id=RUP92057.1;transl_table=11 RBLY01000009.1 Genbank gene 55883 56860 . + . ID=gene-D8M19_09490;Name=D8M19_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09490 RBLY01000009.1 Protein Homology CDS 55883 56860 . + 0 ID=cds-RUP92058.1;Parent=gene-D8M19_09490;Dbxref=NCBI_GP:RUP92058.1;Name=RUP92058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274147.1;locus_tag=D8M19_09490;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=RUP92058.1;transl_table=11 RBLY01000009.1 Genbank gene 56868 57668 . - . ID=gene-D8M19_09495;Name=D8M19_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09495 RBLY01000009.1 Protein Homology CDS 56868 57668 . - 0 ID=cds-RUP92059.1;Parent=gene-D8M19_09495;Dbxref=NCBI_GP:RUP92059.1;Name=RUP92059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821867.1;locus_tag=D8M19_09495;product=ABC transporter ATP-binding protein;protein_id=RUP92059.1;transl_table=11 RBLY01000009.1 Genbank gene 57782 58876 . - . ID=gene-D8M19_09500;Name=D8M19_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09500 RBLY01000009.1 Protein Homology CDS 57782 58876 . - 0 ID=cds-RUP92060.1;Parent=gene-D8M19_09500;Dbxref=NCBI_GP:RUP92060.1;Name=RUP92060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006821868.1;locus_tag=D8M19_09500;product=iron-enterobactin ABC transporter permease;protein_id=RUP92060.1;transl_table=11 RBLY01000009.1 Genbank gene 58873 59895 . - . ID=gene-D8M19_09505;Name=D8M19_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09505 RBLY01000009.1 Protein Homology CDS 58873 59895 . - 0 ID=cds-RUP92061.1;Parent=gene-D8M19_09505;Dbxref=NCBI_GP:RUP92061.1;Name=RUP92061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121293.1;locus_tag=D8M19_09505;product=iron ABC transporter permease;protein_id=RUP92061.1;transl_table=11 RBLY01000009.1 Genbank gene 60329 60700 . + . ID=gene-D8M19_09510;Name=D8M19_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09510 RBLY01000009.1 Protein Homology CDS 60329 60700 . + 0 ID=cds-RUP92062.1;Parent=gene-D8M19_09510;Dbxref=NCBI_GP:RUP92062.1;Name=RUP92062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189586.1;locus_tag=D8M19_09510;product=50S ribosomal protein L14;protein_id=RUP92062.1;transl_table=11 RBLY01000009.1 Genbank gene 60701 61015 . + . ID=gene-D8M19_09515;Name=D8M19_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09515 RBLY01000009.1 Protein Homology CDS 60701 61015 . + 0 ID=cds-RUP92063.1;Parent=gene-D8M19_09515;Dbxref=NCBI_GP:RUP92063.1;Name=RUP92063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441932.1;locus_tag=D8M19_09515;product=50S ribosomal protein L24;protein_id=RUP92063.1;transl_table=11 RBLY01000009.1 Genbank gene 61019 61573 . + . ID=gene-D8M19_09520;Name=D8M19_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09520 RBLY01000009.1 Protein Homology CDS 61019 61573 . + 0 ID=cds-RUP92064.1;Parent=gene-D8M19_09520;Dbxref=NCBI_GP:RUP92064.1;Name=RUP92064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005519738.1;locus_tag=D8M19_09520;product=50S ribosomal protein L5;protein_id=RUP92064.1;transl_table=11 RBLY01000009.1 Genbank gene 61645 61845 . - . ID=gene-D8M19_09525;Name=D8M19_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09525 RBLY01000009.1 GeneMarkS+ CDS 61645 61845 . - 0 ID=cds-RUP92065.1;Parent=gene-D8M19_09525;Dbxref=NCBI_GP:RUP92065.1;Name=RUP92065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=D8M19_09525;product=hypothetical protein;protein_id=RUP92065.1;transl_table=11 RBLY01000009.1 Genbank gene 62002 62511 . + . ID=gene-D8M19_09530;Name=D8M19_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09530 RBLY01000009.1 Protein Homology CDS 62002 62511 . + 0 ID=cds-RUP92066.1;Parent=gene-D8M19_09530;Dbxref=NCBI_GP:RUP92066.1;Name=RUP92066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121287.1;locus_tag=D8M19_09530;product=hypothetical protein;protein_id=RUP92066.1;transl_table=11 RBLY01000009.1 Genbank gene 62879 63274 . + . ID=gene-D8M19_09535;Name=D8M19_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09535 RBLY01000009.1 Protein Homology CDS 62879 63274 . + 0 ID=cds-RUP92067.1;Parent=gene-D8M19_09535;Dbxref=NCBI_GP:RUP92067.1;Name=RUP92067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003854344.1;locus_tag=D8M19_09535;product=30S ribosomal protein S8;protein_id=RUP92067.1;transl_table=11 RBLY01000009.1 Genbank gene 63292 63828 . + . ID=gene-D8M19_09540;Name=D8M19_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09540 RBLY01000009.1 Protein Homology CDS 63292 63828 . + 0 ID=cds-RUP92068.1;Parent=gene-D8M19_09540;Dbxref=NCBI_GP:RUP92068.1;Name=RUP92068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015399953.1;locus_tag=D8M19_09540;product=50S ribosomal protein L6;protein_id=RUP92068.1;transl_table=11 RBLY01000009.1 Genbank gene 63832 64227 . + . ID=gene-D8M19_09545;Name=D8M19_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09545 RBLY01000009.1 Protein Homology CDS 63832 64227 . + 0 ID=cds-RUP92069.1;Parent=gene-D8M19_09545;Dbxref=NCBI_GP:RUP92069.1;Name=RUP92069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018297757.1;locus_tag=D8M19_09545;product=50S ribosomal protein L18;protein_id=RUP92069.1;transl_table=11 RBLY01000009.1 Genbank gene 64268 64882 . + . ID=gene-D8M19_09550;Name=D8M19_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09550 RBLY01000009.1 Protein Homology CDS 64268 64882 . + 0 ID=cds-RUP92070.1;Parent=gene-D8M19_09550;Dbxref=NCBI_GP:RUP92070.1;Name=RUP92070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599779.1;locus_tag=D8M19_09550;product=30S ribosomal protein S5;protein_id=RUP92070.1;transl_table=11 RBLY01000009.1 Genbank gene 64886 65071 . + . ID=gene-D8M19_09555;Name=D8M19_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09555 RBLY01000009.1 Protein Homology CDS 64886 65071 . + 0 ID=cds-RUP92071.1;Parent=gene-D8M19_09555;Dbxref=NCBI_GP:RUP92071.1;Name=RUP92071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003848313.1;locus_tag=D8M19_09555;product=50S ribosomal protein L30;protein_id=RUP92071.1;transl_table=11 RBLY01000009.1 Genbank gene 65079 65528 . + . ID=gene-D8M19_09560;Name=D8M19_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09560 RBLY01000009.1 Protein Homology CDS 65079 65528 . + 0 ID=cds-RUP92072.1;Parent=gene-D8M19_09560;Dbxref=NCBI_GP:RUP92072.1;Name=RUP92072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013889193.1;locus_tag=D8M19_09560;product=50S ribosomal protein L15;protein_id=RUP92072.1;transl_table=11 RBLY01000009.1 Genbank gene 65871 67196 . + . ID=gene-D8M19_09565;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=D8M19_09565 RBLY01000009.1 Protein Homology CDS 65871 67196 . + 0 ID=cds-RUP92073.1;Parent=gene-D8M19_09565;Dbxref=NCBI_GP:RUP92073.1;Name=RUP92073.1;gbkey=CDS;gene=secY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599793.1;locus_tag=D8M19_09565;product=preprotein translocase subunit SecY;protein_id=RUP92073.1;transl_table=11 RBLY01000009.1 Genbank gene 67196 67741 . + . ID=gene-D8M19_09570;Name=D8M19_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09570 RBLY01000009.1 Protein Homology CDS 67196 67741 . + 0 ID=cds-RUP92074.1;Parent=gene-D8M19_09570;Dbxref=NCBI_GP:RUP92074.1;Name=RUP92074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599794.1;locus_tag=D8M19_09570;product=adenylate kinase;protein_id=RUP92074.1;transl_table=11 RBLY01000009.1 Genbank gene 67855 68547 . + . ID=gene-D8M19_09575;Name=D8M19_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09575 RBLY01000009.1 Protein Homology CDS 67855 68547 . + 0 ID=cds-RUP92086.1;Parent=gene-D8M19_09575;Dbxref=NCBI_GP:RUP92086.1;Name=RUP92086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005527798.1;locus_tag=D8M19_09575;product=murein L%2CD-transpeptidase;protein_id=RUP92086.1;transl_table=11 RBLY01000009.1 Genbank gene 68815 69033 . + . ID=gene-D8M19_09580;Name=D8M19_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09580 RBLY01000009.1 Protein Homology CDS 68815 69033 . + 0 ID=cds-RUP92075.1;Parent=gene-D8M19_09580;Dbxref=NCBI_GP:RUP92075.1;Name=RUP92075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_599797.1;locus_tag=D8M19_09580;product=translation initiation factor IF-1;protein_id=RUP92075.1;transl_table=11 RBLY01000009.1 Genbank gene 69220 69588 . + . ID=gene-D8M19_09585;Name=D8M19_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09585 RBLY01000009.1 Protein Homology CDS 69220 69588 . + 0 ID=cds-RUP92076.1;Parent=gene-D8M19_09585;Dbxref=NCBI_GP:RUP92076.1;Name=RUP92076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020441897.1;locus_tag=D8M19_09585;product=30S ribosomal protein S13;protein_id=RUP92076.1;transl_table=11 RBLY01000009.1 Genbank gene 69592 69993 . + . ID=gene-D8M19_09590;Name=D8M19_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09590 RBLY01000009.1 Protein Homology CDS 69592 69993 . + 0 ID=cds-RUP92077.1;Parent=gene-D8M19_09590;Dbxref=NCBI_GP:RUP92077.1;Name=RUP92077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011075047.1;locus_tag=D8M19_09590;product=30S ribosomal protein S11;protein_id=RUP92077.1;transl_table=11 RBLY01000009.1 Genbank gene 70015 70620 . + . ID=gene-D8M19_09595;Name=D8M19_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09595 RBLY01000009.1 Protein Homology CDS 70015 70620 . + 0 ID=cds-RUP92078.1;Parent=gene-D8M19_09595;Dbxref=NCBI_GP:RUP92078.1;Name=RUP92078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010119835.1;locus_tag=D8M19_09595;product=30S ribosomal protein S4;protein_id=RUP92078.1;transl_table=11 RBLY01000009.1 Genbank gene 70702 71709 . + . ID=gene-D8M19_09600;Name=D8M19_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09600 RBLY01000009.1 Protein Homology CDS 70702 71709 . + 0 ID=cds-RUP92079.1;Parent=gene-D8M19_09600;Dbxref=NCBI_GP:RUP92079.1;Name=RUP92079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010189530.1;locus_tag=D8M19_09600;product=DNA-directed RNA polymerase subunit alpha;protein_id=RUP92079.1;transl_table=11 RBLY01000009.1 Genbank gene 71824 72321 . + . ID=gene-D8M19_09605;Name=D8M19_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09605 RBLY01000009.1 Protein Homology CDS 71824 72321 . + 0 ID=cds-RUP92080.1;Parent=gene-D8M19_09605;Dbxref=NCBI_GP:RUP92080.1;Name=RUP92080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121272.1;locus_tag=D8M19_09605;product=50S ribosomal protein L17;protein_id=RUP92080.1;transl_table=11 RBLY01000009.1 Genbank gene 72488 72691 . + . ID=gene-D8M19_09610;Name=D8M19_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=D8M19_09610 RBLY01000009.1 Protein Homology CDS 72488 72691 . + 0 ID=cds-RUP92081.1;Parent=gene-D8M19_09610;Dbxref=NCBI_GP:RUP92081.1;Name=RUP92081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018121270.1;locus_tag=D8M19_09610;product=DUF2892 domain-containing protein;protein_id=RUP92081.1;transl_table=11 ###