##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM588821v1
#!genome-build-accession NCBI_Assembly:GCA_005888215.1
#!annotation-date 11/19/2015 19:46:06
#!annotation-source NCBI 
##sequence-region LNKO01000001.1 1 23512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000001.1	Genbank	region	1	23512	.	+	.	ID=LNKO01000001.1:1..23512;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000001.1	Genbank	gene	82	765	.	+	.	ID=gene-AO052_00005;Name=AO052_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00005
LNKO01000001.1	Protein Homology	CDS	82	765	.	+	0	ID=cds-TMQ41745.1;Parent=gene-AO052_00005;Dbxref=NCBI_GP:TMQ41745.1;Name=TMQ41745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012443161.1;locus_tag=AO052_00005;product=hypothetical protein;protein_id=TMQ41745.1;transl_table=11
LNKO01000001.1	Genbank	gene	784	1098	.	+	.	ID=gene-AO052_00010;Name=AO052_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00010
LNKO01000001.1	Protein Homology	CDS	784	1098	.	+	0	ID=cds-TMQ41746.1;Parent=gene-AO052_00010;Dbxref=NCBI_GP:TMQ41746.1;Name=TMQ41746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642524.1;locus_tag=AO052_00010;product=conjugal transfer protein TraC;protein_id=TMQ41746.1;transl_table=11
LNKO01000001.1	Genbank	gene	1182	1538	.	+	.	ID=gene-AO052_00015;Name=AO052_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00015
LNKO01000001.1	Protein Homology	CDS	1182	1538	.	+	0	ID=cds-TMQ41747.1;Parent=gene-AO052_00015;Dbxref=NCBI_GP:TMQ41747.1;Name=TMQ41747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000362081.1;locus_tag=AO052_00015;product=hypothetical protein;protein_id=TMQ41747.1;transl_table=11
LNKO01000001.1	Genbank	gene	1510	3933	.	+	.	ID=gene-AO052_00020;Name=AO052_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00020
LNKO01000001.1	Protein Homology	CDS	1510	3933	.	+	0	ID=cds-TMQ41748.1;Parent=gene-AO052_00020;Dbxref=NCBI_GP:TMQ41748.1;Name=TMQ41748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642520.1;locus_tag=AO052_00020;product=conjugal transfer protein TraE;protein_id=TMQ41748.1;transl_table=11
LNKO01000001.1	Genbank	gene	3949	4647	.	+	.	ID=gene-AO052_00025;Name=AO052_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00025
LNKO01000001.1	Protein Homology	CDS	3949	4647	.	+	0	ID=cds-TMQ41749.1;Parent=gene-AO052_00025;Dbxref=NCBI_GP:TMQ41749.1;Name=TMQ41749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638116.1;locus_tag=AO052_00025;product=hypothetical protein;protein_id=TMQ41749.1;transl_table=11
LNKO01000001.1	Genbank	gene	4674	5669	.	+	.	ID=gene-AO052_00030;Name=AO052_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00030
LNKO01000001.1	Protein Homology	CDS	4674	5669	.	+	0	ID=cds-TMQ41750.1;Parent=gene-AO052_00030;Dbxref=NCBI_GP:TMQ41750.1;Name=TMQ41750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001028543.1;locus_tag=AO052_00030;product=hypothetical protein;protein_id=TMQ41750.1;transl_table=11
LNKO01000001.1	Genbank	gene	5851	6624	.	+	.	ID=gene-AO052_00035;Name=AO052_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00035
LNKO01000001.1	Protein Homology	CDS	5851	6624	.	+	0	ID=cds-TMQ41751.1;Parent=gene-AO052_00035;Dbxref=NCBI_GP:TMQ41751.1;Name=TMQ41751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638118.1;locus_tag=AO052_00035;product=conjugal transfer protein TraG;protein_id=TMQ41751.1;transl_table=11
LNKO01000001.1	Genbank	gene	6631	7407	.	+	.	ID=gene-AO052_00040;Name=AO052_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00040
LNKO01000001.1	Protein Homology	CDS	6631	7407	.	+	0	ID=cds-TMQ41752.1;Parent=gene-AO052_00040;Dbxref=NCBI_GP:TMQ41752.1;Name=TMQ41752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642450.1;locus_tag=AO052_00040;product=conjugal transfer protein TraH;protein_id=TMQ41752.1;transl_table=11
LNKO01000001.1	Genbank	gene	7400	8578	.	+	.	ID=gene-AO052_00045;Name=AO052_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00045
LNKO01000001.1	Protein Homology	CDS	7400	8578	.	+	0	ID=cds-TMQ41753.1;Parent=gene-AO052_00045;Dbxref=NCBI_GP:TMQ41753.1;Name=TMQ41753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638120.1;locus_tag=AO052_00045;product=conjugal transfer protein TraF;protein_id=TMQ41753.1;transl_table=11
LNKO01000001.1	Genbank	gene	8593	9651	.	+	.	ID=gene-AO052_00050;Name=AO052_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00050
LNKO01000001.1	Protein Homology	CDS	8593	9651	.	+	0	ID=cds-TMQ41754.1;Parent=gene-AO052_00050;Dbxref=NCBI_GP:TMQ41754.1;Name=TMQ41754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638121.1;locus_tag=AO052_00050;product=secretion system protein E;protein_id=TMQ41754.1;transl_table=11
LNKO01000001.1	Genbank	gene	9661	11493	.	+	.	ID=gene-AO052_00055;Name=AO052_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00055
LNKO01000001.1	Protein Homology	CDS	9661	11493	.	+	0	ID=cds-TMQ41755.1;Parent=gene-AO052_00055;Dbxref=NCBI_GP:TMQ41755.1;Name=TMQ41755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642458.1;locus_tag=AO052_00055;product=conjugal transfer protein TraK;protein_id=TMQ41755.1;transl_table=11
LNKO01000001.1	Genbank	gene	11504	12157	.	+	.	ID=gene-AO052_00060;Name=AO052_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00060
LNKO01000001.1	Protein Homology	CDS	11504	12157	.	+	0	ID=cds-TMQ41756.1;Parent=gene-AO052_00060;Dbxref=NCBI_GP:TMQ41756.1;Name=TMQ41756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638123.1;locus_tag=AO052_00060;product=hypothetical protein;protein_id=TMQ41756.1;transl_table=11
LNKO01000001.1	Genbank	gene	12318	12743	.	+	.	ID=gene-AO052_00065;Name=AO052_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00065
LNKO01000001.1	Protein Homology	CDS	12318	12743	.	+	0	ID=cds-TMQ41757.1;Parent=gene-AO052_00065;Dbxref=NCBI_GP:TMQ41757.1;Name=TMQ41757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642463.1;locus_tag=AO052_00065;product=single-stranded DNA-binding protein;protein_id=TMQ41757.1;transl_table=11
LNKO01000001.1	Genbank	gene	12796	15048	.	+	.	ID=gene-AO052_00070;Name=AO052_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00070
LNKO01000001.1	Protein Homology	CDS	12796	15048	.	+	0	ID=cds-TMQ41758.1;Parent=gene-AO052_00070;Dbxref=NCBI_GP:TMQ41758.1;Name=TMQ41758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638126.1;locus_tag=AO052_00070;product=conjugal transfer protein TraE;protein_id=TMQ41758.1;transl_table=11
LNKO01000001.1	Genbank	gene	15084	15566	.	-	.	ID=gene-AO052_00075;Name=AO052_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00075
LNKO01000001.1	Protein Homology	CDS	15084	15566	.	-	0	ID=cds-TMQ41767.1;Parent=gene-AO052_00075;Dbxref=NCBI_GP:TMQ41767.1;Name=TMQ41767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341635.1;locus_tag=AO052_00075;product=hypothetical protein;protein_id=TMQ41767.1;transl_table=11
LNKO01000001.1	Genbank	gene	15753	19115	.	-	.	ID=gene-AO052_00080;Name=AO052_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00080
LNKO01000001.1	Protein Homology	CDS	15753	19115	.	-	0	ID=cds-TMQ41759.1;Parent=gene-AO052_00080;Dbxref=NCBI_GP:TMQ41759.1;Name=TMQ41759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000961028.1;locus_tag=AO052_00080;product=hypothetical protein;protein_id=TMQ41759.1;transl_table=11
LNKO01000001.1	Genbank	gene	19105	19452	.	-	.	ID=gene-AO052_00085;Name=AO052_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00085
LNKO01000001.1	Protein Homology	CDS	19105	19452	.	-	0	ID=cds-TMQ41760.1;Parent=gene-AO052_00085;Dbxref=NCBI_GP:TMQ41760.1;Name=TMQ41760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638131.1;locus_tag=AO052_00085;product=relaxosome protein;protein_id=TMQ41760.1;transl_table=11
LNKO01000001.1	Genbank	gene	19888	20355	.	+	.	ID=gene-AO052_00090;Name=AO052_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00090
LNKO01000001.1	Protein Homology	CDS	19888	20355	.	+	0	ID=cds-TMQ41761.1;Parent=gene-AO052_00090;Dbxref=NCBI_GP:TMQ41761.1;Name=TMQ41761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638133.1;locus_tag=AO052_00090;product=hypothetical protein;protein_id=TMQ41761.1;transl_table=11
LNKO01000001.1	Genbank	gene	20358	21110	.	+	.	ID=gene-AO052_00095;Name=AO052_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00095
LNKO01000001.1	Protein Homology	CDS	20358	21110	.	+	0	ID=cds-TMQ41762.1;Parent=gene-AO052_00095;Dbxref=NCBI_GP:TMQ41762.1;Name=TMQ41762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642469.1;locus_tag=AO052_00095;product=conjugal transfer protein TraL;protein_id=TMQ41762.1;transl_table=11
LNKO01000001.1	Genbank	gene	21348	22082	.	+	.	ID=gene-AO052_00100;Name=AO052_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00100
LNKO01000001.1	Protein Homology	CDS	21348	22082	.	+	0	ID=cds-TMQ41763.1;Parent=gene-AO052_00100;Dbxref=NCBI_GP:TMQ41763.1;Name=TMQ41763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638136.1;locus_tag=AO052_00100;product=hypothetical protein;protein_id=TMQ41763.1;transl_table=11
LNKO01000001.1	Genbank	gene	22085	22405	.	+	.	ID=gene-AO052_00105;Name=AO052_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00105
LNKO01000001.1	Protein Homology	CDS	22085	22405	.	+	0	ID=cds-TMQ41764.1;Parent=gene-AO052_00105;Dbxref=NCBI_GP:TMQ41764.1;Name=TMQ41764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638137.1;locus_tag=AO052_00105;product=hypothetical protein;protein_id=TMQ41764.1;transl_table=11
LNKO01000001.1	Genbank	gene	22500	22712	.	-	.	ID=gene-AO052_00110;Name=AO052_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00110
LNKO01000001.1	GeneMarkS+	CDS	22500	22712	.	-	0	ID=cds-TMQ41765.1;Parent=gene-AO052_00110;Dbxref=NCBI_GP:TMQ41765.1;Name=TMQ41765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_00110;product=hypothetical protein;protein_id=TMQ41765.1;transl_table=11
LNKO01000001.1	Genbank	gene	22918	23430	.	-	.	ID=gene-AO052_00115;Name=AO052_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00115
LNKO01000001.1	Protein Homology	CDS	22918	23430	.	-	0	ID=cds-TMQ41766.1;Parent=gene-AO052_00115;Dbxref=NCBI_GP:TMQ41766.1;Name=TMQ41766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006816365.1;locus_tag=AO052_00115;product=molecular chaperone DnaJ;protein_id=TMQ41766.1;transl_table=11
##sequence-region LNKO01000002.1 1 27875
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000002.1	Genbank	region	1	27875	.	+	.	ID=LNKO01000002.1:1..27875;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000002.1	Genbank	gene	138	253	.	+	.	ID=gene-AO052_00120;Name=AO052_00120;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO052_00120
LNKO01000002.1	cmsearch	rRNA	138	253	.	+	.	ID=rna-AO052_00120;Parent=gene-AO052_00120;gbkey=rRNA;locus_tag=AO052_00120;product=5S ribosomal RNA
LNKO01000002.1	cmsearch	exon	138	253	.	+	.	ID=exon-AO052_00120-1;Parent=rna-AO052_00120;gbkey=rRNA;locus_tag=AO052_00120;product=5S ribosomal RNA
LNKO01000002.1	Genbank	gene	266	342	.	+	.	ID=gene-AO052_00125;Name=AO052_00125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00125
LNKO01000002.1	tRNAscan-SE	tRNA	266	342	.	+	.	ID=rna-AO052_00125;Parent=gene-AO052_00125;anticodon=(pos:300..302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00125;product=tRNA-Asp
LNKO01000002.1	tRNAscan-SE	exon	266	342	.	+	.	ID=exon-AO052_00125-1;Parent=rna-AO052_00125;anticodon=(pos:300..302);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00125;product=tRNA-Asp
LNKO01000002.1	Genbank	gene	371	446	.	+	.	ID=gene-AO052_00130;Name=AO052_00130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00130
LNKO01000002.1	tRNAscan-SE	tRNA	371	446	.	+	.	ID=rna-AO052_00130;Parent=gene-AO052_00130;anticodon=(pos:404..406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00130;product=tRNA-Trp
LNKO01000002.1	tRNAscan-SE	exon	371	446	.	+	.	ID=exon-AO052_00130-1;Parent=rna-AO052_00130;anticodon=(pos:404..406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00130;product=tRNA-Trp
LNKO01000002.1	Genbank	gene	715	1134	.	+	.	ID=gene-AO052_00135;Name=AO052_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00135
LNKO01000002.1	Protein Homology	CDS	715	1134	.	+	0	ID=cds-TMQ41710.1;Parent=gene-AO052_00135;Dbxref=NCBI_GP:TMQ41710.1;Name=TMQ41710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632950.1;locus_tag=AO052_00135;product=phosphate-starvation-inducible protein PsiE;protein_id=TMQ41710.1;transl_table=11
LNKO01000002.1	Genbank	gene	1198	2484	.	-	.	ID=gene-AO052_00140;Name=AO052_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00140
LNKO01000002.1	Protein Homology	CDS	1198	2484	.	-	0	ID=cds-TMQ41711.1;Parent=gene-AO052_00140;Dbxref=NCBI_GP:TMQ41711.1;Name=TMQ41711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701760.1;locus_tag=AO052_00140;product=heme biosynthesis protein HemY;protein_id=TMQ41711.1;transl_table=11
LNKO01000002.1	Genbank	gene	2495	3706	.	-	.	ID=gene-AO052_00145;Name=AO052_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00145
LNKO01000002.1	Protein Homology	CDS	2495	3706	.	-	0	ID=cds-TMQ41712.1;Parent=gene-AO052_00145;Dbxref=NCBI_GP:TMQ41712.1;Name=TMQ41712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648591.1;locus_tag=AO052_00145;product=HemX protein;protein_id=TMQ41712.1;transl_table=11
LNKO01000002.1	Genbank	gene	4011	6542	.	+	.	ID=gene-AO052_00150;Name=AO052_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00150
LNKO01000002.1	Protein Homology	CDS	4011	6542	.	+	0	ID=cds-TMQ41713.1;Parent=gene-AO052_00150;Dbxref=NCBI_GP:TMQ41713.1;Name=TMQ41713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995371.1;locus_tag=AO052_00150;product=adenylate cyclase;protein_id=TMQ41713.1;transl_table=11
LNKO01000002.1	Genbank	gene	6616	7623	.	+	.	ID=gene-AO052_00155;Name=AO052_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00155
LNKO01000002.1	Protein Homology	CDS	6616	7623	.	+	0	ID=cds-TMQ41714.1;Parent=gene-AO052_00155;Dbxref=NCBI_GP:TMQ41714.1;Name=TMQ41714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995372.1;locus_tag=AO052_00155;product=glycerol-3-phosphate dehydrogenase;protein_id=TMQ41714.1;transl_table=11
LNKO01000002.1	Genbank	gene	7640	8443	.	+	.	ID=gene-AO052_00160;Name=AO052_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00160
LNKO01000002.1	Protein Homology	CDS	7640	8443	.	+	0	ID=cds-TMQ41715.1;Parent=gene-AO052_00160;Dbxref=NCBI_GP:TMQ41715.1;Name=TMQ41715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550529.1;locus_tag=AO052_00160;product=serine acetyltransferase;protein_id=TMQ41715.1;transl_table=11
LNKO01000002.1	Genbank	gene	8453	9268	.	+	.	ID=gene-AO052_00165;Name=AO052_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00165
LNKO01000002.1	Protein Homology	CDS	8453	9268	.	+	0	ID=cds-TMQ41716.1;Parent=gene-AO052_00165;Dbxref=NCBI_GP:TMQ41716.1;Name=TMQ41716.1;Note=catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658585.1;locus_tag=AO052_00165;product=shikimate dehydrogenase;protein_id=TMQ41716.1;transl_table=11
LNKO01000002.1	Genbank	gene	9407	10792	.	+	.	ID=gene-AO052_00170;Name=AO052_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00170
LNKO01000002.1	Protein Homology	CDS	9407	10792	.	+	0	ID=cds-TMQ41717.1;Parent=gene-AO052_00170;Dbxref=NCBI_GP:TMQ41717.1;Name=TMQ41717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995374.1;locus_tag=AO052_00170;product=transporter;protein_id=TMQ41717.1;transl_table=11
LNKO01000002.1	Genbank	gene	10930	11778	.	-	.	ID=gene-AO052_00175;Name=AO052_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00175
LNKO01000002.1	Protein Homology	CDS	10930	11778	.	-	0	ID=cds-TMQ41718.1;Parent=gene-AO052_00175;Dbxref=NCBI_GP:TMQ41718.1;Name=TMQ41718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701765.1;locus_tag=AO052_00175;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=TMQ41718.1;transl_table=11
LNKO01000002.1	Genbank	gene	11960	12036	.	+	.	ID=gene-AO052_00180;Name=AO052_00180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00180
LNKO01000002.1	tRNAscan-SE	tRNA	11960	12036	.	+	.	ID=rna-AO052_00180;Parent=gene-AO052_00180;anticodon=(pos:11994..11996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00180;product=tRNA-Pro
LNKO01000002.1	tRNAscan-SE	exon	11960	12036	.	+	.	ID=exon-AO052_00180-1;Parent=rna-AO052_00180;anticodon=(pos:11994..11996);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00180;product=tRNA-Pro
LNKO01000002.1	Genbank	gene	12084	12160	.	+	.	ID=gene-AO052_00185;Name=AO052_00185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00185
LNKO01000002.1	tRNAscan-SE	tRNA	12084	12160	.	+	.	ID=rna-AO052_00185;Parent=gene-AO052_00185;anticodon=(pos:12118..12120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00185;product=tRNA-Arg
LNKO01000002.1	tRNAscan-SE	exon	12084	12160	.	+	.	ID=exon-AO052_00185-1;Parent=rna-AO052_00185;anticodon=(pos:12118..12120);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00185;product=tRNA-Arg
LNKO01000002.1	Genbank	gene	12306	13592	.	-	.	ID=gene-AO052_00190;Name=AO052_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00190
LNKO01000002.1	Protein Homology	CDS	12306	13592	.	-	0	ID=cds-TMQ41719.1;Parent=gene-AO052_00190;Dbxref=NCBI_GP:TMQ41719.1;Name=TMQ41719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272191.1;locus_tag=AO052_00190;product=MFS transporter;protein_id=TMQ41719.1;transl_table=11
LNKO01000002.1	Genbank	gene	13631	14281	.	-	.	ID=gene-AO052_00195;Name=AO052_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00195
LNKO01000002.1	Protein Homology	CDS	13631	14281	.	-	0	ID=cds-TMQ41720.1;Parent=gene-AO052_00195;Dbxref=NCBI_GP:TMQ41720.1;Name=TMQ41720.1;Note=catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658574.1;locus_tag=AO052_00195;product=L-fuculose phosphate aldolase;protein_id=TMQ41720.1;transl_table=11
LNKO01000002.1	Genbank	gene	14301	14735	.	-	.	ID=gene-AO052_00200;Name=AO052_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00200
LNKO01000002.1	Protein Homology	CDS	14301	14735	.	-	0	ID=cds-TMQ41721.1;Parent=gene-AO052_00200;Dbxref=NCBI_GP:TMQ41721.1;Name=TMQ41721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661544.1;locus_tag=AO052_00200;product=fucose isomerase;protein_id=TMQ41721.1;transl_table=11
LNKO01000002.1	Genbank	gene	14749	16161	.	-	.	ID=gene-AO052_00205;Name=AO052_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00205
LNKO01000002.1	Protein Homology	CDS	14749	16161	.	-	0	ID=cds-TMQ41722.1;Parent=gene-AO052_00205;Dbxref=NCBI_GP:TMQ41722.1;Name=TMQ41722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272192.1;locus_tag=AO052_00205;product=L-fuculose kinase;protein_id=TMQ41722.1;transl_table=11
LNKO01000002.1	Genbank	gene	16235	18004	.	-	.	ID=gene-AO052_00210;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AO052_00210
LNKO01000002.1	Protein Homology	CDS	16235	18004	.	-	0	ID=cds-TMQ41723.1;Parent=gene-AO052_00210;Dbxref=NCBI_GP:TMQ41723.1;Name=TMQ41723.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;gbkey=CDS;gene=fucI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526315.1;locus_tag=AO052_00210;product=L-fucose isomerase;protein_id=TMQ41723.1;transl_table=11
LNKO01000002.1	Genbank	gene	18234	18983	.	-	.	ID=gene-AO052_00215;Name=AO052_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00215
LNKO01000002.1	Protein Homology	CDS	18234	18983	.	-	0	ID=cds-TMQ41724.1;Parent=gene-AO052_00215;Dbxref=NCBI_GP:TMQ41724.1;Name=TMQ41724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665097.1;locus_tag=AO052_00215;product=DeoR family transcriptional regulator;protein_id=TMQ41724.1;transl_table=11
LNKO01000002.1	Genbank	gene	19177	21948	.	+	.	ID=gene-AO052_00220;Name=AO052_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00220
LNKO01000002.1	Protein Homology	CDS	19177	21948	.	+	0	ID=cds-TMQ41725.1;Parent=gene-AO052_00220;Dbxref=NCBI_GP:TMQ41725.1;Name=TMQ41725.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526314.1;locus_tag=AO052_00220;product=RNA polymerase-associated protein RapA;protein_id=TMQ41725.1;transl_table=11
LNKO01000002.1	Genbank	gene	21951	22610	.	+	.	ID=gene-AO052_00225;Name=AO052_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00225
LNKO01000002.1	Protein Homology	CDS	21951	22610	.	+	0	ID=cds-TMQ41726.1;Parent=gene-AO052_00225;Dbxref=NCBI_GP:TMQ41726.1;Name=TMQ41726.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500445.1;locus_tag=AO052_00225;product=23S rRNA pseudouridylate synthase;protein_id=TMQ41726.1;transl_table=11
LNKO01000002.1	Genbank	gene	22637	23215	.	+	.	ID=gene-AO052_00230;Name=AO052_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00230
LNKO01000002.1	Protein Homology	CDS	22637	23215	.	+	0	ID=cds-TMQ41727.1;Parent=gene-AO052_00230;Dbxref=NCBI_GP:TMQ41727.1;Name=TMQ41727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633082.1;locus_tag=AO052_00230;product=rhomboid family intramembrane serine protease;protein_id=TMQ41727.1;transl_table=11
LNKO01000002.1	Genbank	gene	23245	24012	.	+	.	ID=gene-AO052_00235;Name=AO052_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00235
LNKO01000002.1	Protein Homology	CDS	23245	24012	.	+	0	ID=cds-TMQ41728.1;Parent=gene-AO052_00235;Dbxref=NCBI_GP:TMQ41728.1;Name=TMQ41728.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688247.1;locus_tag=AO052_00235;product=transcriptional regulator;protein_id=TMQ41728.1;transl_table=11
LNKO01000002.1	Genbank	gene	24314	25135	.	-	.	ID=gene-AO052_00240;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AO052_00240
LNKO01000002.1	Protein Homology	CDS	24314	25135	.	-	0	ID=cds-TMQ41729.1;Parent=gene-AO052_00240;Dbxref=NCBI_GP:TMQ41729.1;Name=TMQ41729.1;gbkey=CDS;gene=metQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500267.1;locus_tag=AO052_00240;product=DL-methionine transporter substrate-binding subunit;protein_id=TMQ41729.1;transl_table=11
LNKO01000002.1	Genbank	gene	25174	25863	.	-	.	ID=gene-AO052_00245;Name=AO052_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00245
LNKO01000002.1	Protein Homology	CDS	25174	25863	.	-	0	ID=cds-TMQ41730.1;Parent=gene-AO052_00245;Dbxref=NCBI_GP:TMQ41730.1;Name=TMQ41730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648554.1;locus_tag=AO052_00245;product=methionine ABC transporter permease;protein_id=TMQ41730.1;transl_table=11
LNKO01000002.1	Genbank	gene	25853	26890	.	-	.	ID=gene-AO052_00250;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AO052_00250
LNKO01000002.1	Protein Homology	CDS	25853	26890	.	-	0	ID=cds-TMQ41731.1;Parent=gene-AO052_00250;Dbxref=NCBI_GP:TMQ41731.1;Name=TMQ41731.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692764.1;locus_tag=AO052_00250;product=DL-methionine transporter ATP-binding subunit;protein_id=TMQ41731.1;transl_table=11
LNKO01000002.1	Genbank	gene	27066	27620	.	+	.	ID=gene-AO052_00255;Name=AO052_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00255
LNKO01000002.1	Protein Homology	CDS	27066	27620	.	+	0	ID=cds-TMQ41732.1;Parent=gene-AO052_00255;Dbxref=NCBI_GP:TMQ41732.1;Name=TMQ41732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526310.1;locus_tag=AO052_00255;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=TMQ41732.1;transl_table=11
##sequence-region LNKO01000003.1 1 22735
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000003.1	Genbank	region	1	22735	.	+	.	ID=LNKO01000003.1:1..22735;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000003.1	Genbank	gene	160	288	.	+	.	ID=gene-AO052_00260;Name=AO052_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00260
LNKO01000003.1	Protein Homology	CDS	160	288	.	+	0	ID=cds-TMQ41608.1;Parent=gene-AO052_00260;Dbxref=NCBI_GP:TMQ41608.1;Name=TMQ41608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961994.1;locus_tag=AO052_00260;product=hypothetical protein;protein_id=TMQ41608.1;transl_table=11
LNKO01000003.1	Genbank	gene	355	891	.	+	.	ID=gene-AO052_00265;Name=AO052_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00265
LNKO01000003.1	Protein Homology	CDS	355	891	.	+	0	ID=cds-TMQ41609.1;Parent=gene-AO052_00265;Dbxref=NCBI_GP:TMQ41609.1;Name=TMQ41609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651005.1;locus_tag=AO052_00265;product=ATPase;protein_id=TMQ41609.1;transl_table=11
LNKO01000003.1	Genbank	gene	1090	1641	.	+	.	ID=gene-AO052_00270;Name=AO052_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00270
LNKO01000003.1	Protein Homology	CDS	1090	1641	.	+	0	ID=cds-TMQ41610.1;Parent=gene-AO052_00270;Dbxref=NCBI_GP:TMQ41610.1;Name=TMQ41610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525906.1;locus_tag=AO052_00270;product=hypothetical protein;protein_id=TMQ41610.1;transl_table=11
LNKO01000003.1	Genbank	gene	1920	3002	.	+	.	ID=gene-AO052_00275;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AO052_00275
LNKO01000003.1	Protein Homology	CDS	1920	3002	.	+	0	ID=cds-TMQ41630.1;Parent=gene-AO052_00275;Dbxref=NCBI_GP:TMQ41630.1;Name=TMQ41630.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962000.1;locus_tag=AO052_00275;product=peptide chain release factor 1;protein_id=TMQ41630.1;transl_table=11
LNKO01000003.1	Genbank	gene	3055	3495	.	+	.	ID=gene-AO052_00280;Name=AO052_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00280
LNKO01000003.1	Protein Homology	CDS	3055	3495	.	+	0	ID=cds-TMQ41611.1;Parent=gene-AO052_00280;Dbxref=NCBI_GP:TMQ41611.1;Name=TMQ41611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687758.1;locus_tag=AO052_00280;product=hypothetical protein;protein_id=TMQ41611.1;transl_table=11
LNKO01000003.1	Genbank	gene	3495	4373	.	+	.	ID=gene-AO052_00285;Name=AO052_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00285
LNKO01000003.1	Protein Homology	CDS	3495	4373	.	+	0	ID=cds-TMQ41612.1;Parent=gene-AO052_00285;Dbxref=NCBI_GP:TMQ41612.1;Name=TMQ41612.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702377.1;locus_tag=AO052_00285;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=TMQ41612.1;transl_table=11
LNKO01000003.1	Genbank	gene	4373	5176	.	+	.	ID=gene-AO052_00290;Name=AO052_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00290
LNKO01000003.1	Protein Homology	CDS	4373	5176	.	+	0	ID=cds-TMQ41613.1;Parent=gene-AO052_00290;Dbxref=NCBI_GP:TMQ41613.1;Name=TMQ41613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633474.1;locus_tag=AO052_00290;product=hypothetical protein;protein_id=TMQ41613.1;transl_table=11
LNKO01000003.1	Genbank	gene	5191	6045	.	+	.	ID=gene-AO052_00295;Name=AO052_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00295
LNKO01000003.1	Protein Homology	CDS	5191	6045	.	+	0	ID=cds-TMQ41614.1;Parent=gene-AO052_00295;Dbxref=NCBI_GP:TMQ41614.1;Name=TMQ41614.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCE8.1;locus_tag=AO052_00295;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=TMQ41614.1;transl_table=11
LNKO01000003.1	Genbank	gene	6105	7052	.	+	.	ID=gene-AO052_00300;Name=AO052_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00300
LNKO01000003.1	Protein Homology	CDS	6105	7052	.	+	0	ID=cds-TMQ41615.1;Parent=gene-AO052_00300;Dbxref=NCBI_GP:TMQ41615.1;Name=TMQ41615.1;Note=Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45250.1;locus_tag=AO052_00300;product=glycerate dehydrogenase;protein_id=TMQ41615.1;transl_table=11
LNKO01000003.1	Genbank	gene	7052	8233	.	+	.	ID=gene-AO052_00305;Name=AO052_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00305
LNKO01000003.1	Protein Homology	CDS	7052	8233	.	+	0	ID=cds-TMQ41616.1;Parent=gene-AO052_00305;Dbxref=NCBI_GP:TMQ41616.1;Name=TMQ41616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996103.1;locus_tag=AO052_00305;product=permease;protein_id=TMQ41616.1;transl_table=11
LNKO01000003.1	Genbank	gene	8248	9537	.	+	.	ID=gene-AO052_00310;Name=AO052_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00310
LNKO01000003.1	Protein Homology	CDS	8248	9537	.	+	0	ID=cds-TMQ41631.1;Parent=gene-AO052_00310;Dbxref=NCBI_GP:TMQ41631.1;Name=TMQ41631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667065.1;locus_tag=AO052_00310;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=TMQ41631.1;transl_table=11
LNKO01000003.1	Genbank	gene	9546	10688	.	+	.	ID=gene-AO052_00315;Name=AO052_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00315
LNKO01000003.1	Protein Homology	CDS	9546	10688	.	+	0	ID=cds-TMQ41617.1;Parent=gene-AO052_00315;Dbxref=NCBI_GP:TMQ41617.1;Name=TMQ41617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKR3.1;locus_tag=AO052_00315;product=8-amino-7-oxononanoate synthase;protein_id=TMQ41617.1;transl_table=11
LNKO01000003.1	Genbank	gene	10698	11345	.	+	.	ID=gene-AO052_00320;Name=AO052_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00320
LNKO01000003.1	Protein Homology	CDS	10698	11345	.	+	0	ID=cds-TMQ41618.1;Parent=gene-AO052_00320;Dbxref=NCBI_GP:TMQ41618.1;Name=TMQ41618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702371.1;locus_tag=AO052_00320;product=hypothetical protein;protein_id=TMQ41618.1;transl_table=11
LNKO01000003.1	Genbank	gene	11333	12112	.	+	.	ID=gene-AO052_00325;Name=AO052_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00325
LNKO01000003.1	Protein Homology	CDS	11333	12112	.	+	0	ID=cds-TMQ41619.1;Parent=gene-AO052_00325;Dbxref=NCBI_GP:TMQ41619.1;Name=TMQ41619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525898.1;locus_tag=AO052_00325;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=TMQ41619.1;transl_table=11
LNKO01000003.1	Genbank	gene	12125	12766	.	+	.	ID=gene-AO052_00330;Name=AO052_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00330
LNKO01000003.1	Protein Homology	CDS	12125	12766	.	+	0	ID=cds-TMQ41620.1;Parent=gene-AO052_00330;Dbxref=NCBI_GP:TMQ41620.1;Name=TMQ41620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272544.1;locus_tag=AO052_00330;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=TMQ41620.1;transl_table=11
LNKO01000003.1	Genbank	gene	12848	13531	.	+	.	ID=gene-AO052_00335;Name=AO052_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00335
LNKO01000003.1	Protein Homology	CDS	12848	13531	.	+	0	ID=cds-TMQ41621.1;Parent=gene-AO052_00335;Dbxref=NCBI_GP:TMQ41621.1;Name=TMQ41621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637962.1;locus_tag=AO052_00335;product=ABC transporter ATP-binding protein;protein_id=TMQ41621.1;transl_table=11
LNKO01000003.1	Genbank	gene	13531	14781	.	+	.	ID=gene-AO052_00340;Name=AO052_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00340
LNKO01000003.1	Protein Homology	CDS	13531	14781	.	+	0	ID=cds-TMQ41622.1;Parent=gene-AO052_00340;Dbxref=NCBI_GP:TMQ41622.1;Name=TMQ41622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644722.1;locus_tag=AO052_00340;product=lipoprotein-releasing protein LolC;protein_id=TMQ41622.1;transl_table=11
LNKO01000003.1	Genbank	gene	14998	16086	.	+	.	ID=gene-AO052_00345;Name=AO052_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00345
LNKO01000003.1	Protein Homology	CDS	14998	16086	.	+	0	ID=cds-TMQ41623.1;Parent=gene-AO052_00345;Dbxref=NCBI_GP:TMQ41623.1;Name=TMQ41623.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702367.1;locus_tag=AO052_00345;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=TMQ41623.1;transl_table=11
LNKO01000003.1	Genbank	gene	16165	16605	.	-	.	ID=gene-AO052_00350;Name=AO052_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00350
LNKO01000003.1	Protein Homology	CDS	16165	16605	.	-	0	ID=cds-TMQ41624.1;Parent=gene-AO052_00350;Dbxref=NCBI_GP:TMQ41624.1;Name=TMQ41624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641993.1;locus_tag=AO052_00350;product=hypothetical protein;protein_id=TMQ41624.1;transl_table=11
LNKO01000003.1	Genbank	gene	16890	18134	.	+	.	ID=gene-AO052_00355;Name=AO052_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00355
LNKO01000003.1	Protein Homology	CDS	16890	18134	.	+	0	ID=cds-TMQ41625.1;Parent=gene-AO052_00355;Dbxref=NCBI_GP:TMQ41625.1;Name=TMQ41625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527724.1;locus_tag=AO052_00355;product=serine/threonine transporter SstT;protein_id=TMQ41625.1;transl_table=11
LNKO01000003.1	Genbank	gene	18255	18863	.	+	.	ID=gene-AO052_00360;Name=AO052_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00360
LNKO01000003.1	Protein Homology	CDS	18255	18863	.	+	0	ID=cds-TMQ41626.1;Parent=gene-AO052_00360;Dbxref=NCBI_GP:TMQ41626.1;Name=TMQ41626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525891.1;locus_tag=AO052_00360;product=NAD(P)H oxidoreductase;protein_id=TMQ41626.1;transl_table=11
LNKO01000003.1	Genbank	gene	18863	19417	.	+	.	ID=gene-AO052_00365;Name=AO052_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00365
LNKO01000003.1	Protein Homology	CDS	18863	19417	.	+	0	ID=cds-TMQ41627.1;Parent=gene-AO052_00365;Dbxref=NCBI_GP:TMQ41627.1;Name=TMQ41627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688490.1;locus_tag=AO052_00365;product=hypothetical protein;protein_id=TMQ41627.1;transl_table=11
LNKO01000003.1	Genbank	gene	19464	20018	.	-	.	ID=gene-AO052_00370;Name=AO052_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00370
LNKO01000003.1	Protein Homology	CDS	19464	20018	.	-	0	ID=cds-TMQ41628.1;Parent=gene-AO052_00370;Dbxref=NCBI_GP:TMQ41628.1;Name=TMQ41628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996091.1;locus_tag=AO052_00370;product=NAD(P)H nitroreductase;protein_id=TMQ41628.1;transl_table=11
LNKO01000003.1	Genbank	gene	20115	21965	.	+	.	ID=gene-AO052_00375;Name=AO052_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00375
LNKO01000003.1	Protein Homology	CDS	20115	21965	.	+	0	ID=cds-TMQ41629.1;Parent=gene-AO052_00375;Dbxref=NCBI_GP:TMQ41629.1;Name=TMQ41629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525889.1;locus_tag=AO052_00375;product=signal peptide peptidase SppA;protein_id=TMQ41629.1;transl_table=11
LNKO01000003.1	Genbank	gene	22003	22735	.	-	.	ID=gene-AO052_00380;Name=AO052_00380;end_range=22735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00380;partial=true
LNKO01000003.1	Protein Homology	CDS	22003	22735	.	-	1	ID=cds-TMQ41632.1;Parent=gene-AO052_00380;Dbxref=NCBI_GP:TMQ41632.1;Name=TMQ41632.1;end_range=22735,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272550.1;locus_tag=AO052_00380;partial=true;product=lipopolysaccharide cholinephosphotransferase;protein_id=TMQ41632.1;transl_table=11
##sequence-region LNKO01000004.1 1 11900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000004.1	Genbank	region	1	11900	.	+	.	ID=LNKO01000004.1:1..11900;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000004.1	Genbank	gene	416	694	.	+	.	ID=gene-AO052_00385;Name=AO052_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00385
LNKO01000004.1	Protein Homology	CDS	416	694	.	+	0	ID=cds-TMQ41539.1;Parent=gene-AO052_00385;Dbxref=NCBI_GP:TMQ41539.1;Name=TMQ41539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995387.1;locus_tag=AO052_00385;product=hypothetical protein;protein_id=TMQ41539.1;transl_table=11
LNKO01000004.1	Genbank	gene	808	1368	.	+	.	ID=gene-AO052_00390;Name=AO052_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00390
LNKO01000004.1	Protein Homology	CDS	808	1368	.	+	0	ID=cds-TMQ41540.1;Parent=gene-AO052_00390;Dbxref=NCBI_GP:TMQ41540.1;Name=TMQ41540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551091.1;locus_tag=AO052_00390;product=aminotransferase;protein_id=TMQ41540.1;transl_table=11
LNKO01000004.1	Genbank	gene	1372	1812	.	+	.	ID=gene-AO052_00395;Name=AO052_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00395
LNKO01000004.1	Protein Homology	CDS	1372	1812	.	+	0	ID=cds-TMQ41541.1;Parent=gene-AO052_00395;Dbxref=NCBI_GP:TMQ41541.1;Name=TMQ41541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526308.1;locus_tag=AO052_00395;product=hypothetical protein;protein_id=TMQ41541.1;transl_table=11
LNKO01000004.1	Genbank	gene	1874	2500	.	-	.	ID=gene-AO052_00400;Name=AO052_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00400
LNKO01000004.1	Protein Homology	CDS	1874	2500	.	-	0	ID=cds-TMQ41542.1;Parent=gene-AO052_00400;Dbxref=NCBI_GP:TMQ41542.1;Name=TMQ41542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629869.1;locus_tag=AO052_00400;product=two-component system response regulator;protein_id=TMQ41542.1;transl_table=11
LNKO01000004.1	Genbank	gene	2706	3953	.	-	.	ID=gene-AO052_00405;Name=AO052_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00405
LNKO01000004.1	Protein Homology	CDS	2706	3953	.	-	0	ID=cds-TMQ41543.1;Parent=gene-AO052_00405;Dbxref=NCBI_GP:TMQ41543.1;Name=TMQ41543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526307.1;locus_tag=AO052_00405;product=diaminopimelate decarboxylase;protein_id=TMQ41543.1;transl_table=11
LNKO01000004.1	Genbank	gene	4214	4519	.	+	.	ID=gene-AO052_00410;Name=AO052_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00410
LNKO01000004.1	Protein Homology	CDS	4214	4519	.	+	0	ID=cds-TMQ41544.1;Parent=gene-AO052_00410;Dbxref=NCBI_GP:TMQ41544.1;Name=TMQ41544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626020.1;locus_tag=AO052_00410;product=iron donor protein CyaY;protein_id=TMQ41544.1;transl_table=11
LNKO01000004.1	Genbank	gene	4521	6380	.	+	.	ID=gene-AO052_00415;Name=AO052_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00415
LNKO01000004.1	Protein Homology	CDS	4521	6380	.	+	0	ID=cds-TMQ41545.1;Parent=gene-AO052_00415;Dbxref=NCBI_GP:TMQ41545.1;Name=TMQ41545.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995390.1;locus_tag=AO052_00415;product=ATP-dependent DNA helicase RecQ;protein_id=TMQ41545.1;transl_table=11
LNKO01000004.1	Genbank	gene	6465	8183	.	+	.	ID=gene-AO052_00420;Name=AO052_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00420
LNKO01000004.1	Protein Homology	CDS	6465	8183	.	+	0	ID=cds-TMQ41546.1;Parent=gene-AO052_00420;Dbxref=NCBI_GP:TMQ41546.1;Name=TMQ41546.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648541.1;locus_tag=AO052_00420;product=proline--tRNA ligase;protein_id=TMQ41546.1;transl_table=11
LNKO01000004.1	Genbank	gene	8271	10619	.	-	.	ID=gene-AO052_00425;Name=AO052_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00425
LNKO01000004.1	Protein Homology	CDS	8271	10619	.	-	0	ID=cds-TMQ41547.1;Parent=gene-AO052_00425;Dbxref=NCBI_GP:TMQ41547.1;Name=TMQ41547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693136.1;locus_tag=AO052_00425;product=LPS biosynthesis protein;protein_id=TMQ41547.1;transl_table=11
LNKO01000004.1	Genbank	gene	10738	11900	.	-	.	ID=gene-AO052_00430;Name=AO052_00430;end_range=11900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00430;partial=true
LNKO01000004.1	Protein Homology	CDS	10738	11900	.	-	2	ID=cds-TMQ41548.1;Parent=gene-AO052_00430;Dbxref=NCBI_GP:TMQ41548.1;Name=TMQ41548.1;end_range=11900,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526305.1;locus_tag=AO052_00430;partial=true;product=cell division protein FtsQ;protein_id=TMQ41548.1;transl_table=11
##sequence-region LNKO01000005.1 1 25965
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000005.1	Genbank	region	1	25965	.	+	.	ID=LNKO01000005.1:1..25965;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000005.1	Genbank	pseudogene	1	339	.	+	.	ID=gene-AO052_00435;Name=AO052_00435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00435;pseudo=true
LNKO01000005.1	Protein Homology	CDS	1	339	.	+	0	ID=cds-AO052_00435;Parent=gene-AO052_00435;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO052_00435;pseudo=true;transl_table=11
LNKO01000005.1	Genbank	pseudogene	456	983	.	-	.	ID=gene-AO052_00440;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=AO052_00440;pseudo=true
LNKO01000005.1	Protein Homology	CDS	456	983	.	-	0	ID=cds-AO052_00440;Parent=gene-AO052_00440;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650412.1;locus_tag=AO052_00440;pseudo=true;transl_table=11
LNKO01000005.1	Genbank	gene	1134	2279	.	-	.	ID=gene-AO052_00445;Name=AO052_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00445
LNKO01000005.1	Protein Homology	CDS	1134	2279	.	-	0	ID=cds-TMQ41501.1;Parent=gene-AO052_00445;Dbxref=NCBI_GP:TMQ41501.1;Name=TMQ41501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45219.1;locus_tag=AO052_00445;product=cell division protein FtsH;protein_id=TMQ41501.1;transl_table=11
LNKO01000005.1	Protein Homology	pseudogene	2416	4629	.	+	.	ID=gene-AO052_00450;Name=AO052_00450;Note=disrupted;description=ligand-gated channel protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00450;pseudo=true
LNKO01000005.1	Genbank	gene	4688	6457	.	+	.	ID=gene-AO052_00455;Name=AO052_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00455
LNKO01000005.1	Protein Homology	CDS	4688	6457	.	+	0	ID=cds-TMQ41502.1;Parent=gene-AO052_00455;Dbxref=NCBI_GP:TMQ41502.1;Name=TMQ41502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525873.1;locus_tag=AO052_00455;product=ABC transporter ATP-binding protein;protein_id=TMQ41502.1;transl_table=11
LNKO01000005.1	Protein Homology	pseudogene	6589	6857	.	-	.	ID=gene-AO052_00460;Name=AO052_00460;Note=disrupted;description=30S ribosomal protein S15;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00460;pseudo=true
LNKO01000005.1	Protein Homology	pseudogene	6891	7235	.	-	.	ID=gene-AO052_00465;Name=AO052_00465;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00465;pseudo=true
LNKO01000005.1	Genbank	gene	7245	8006	.	-	.	ID=gene-AO052_00470;Name=AO052_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00470
LNKO01000005.1	Protein Homology	CDS	7245	8006	.	-	0	ID=cds-TMQ41503.1;Parent=gene-AO052_00470;Dbxref=NCBI_GP:TMQ41503.1;Name=TMQ41503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687821.1;locus_tag=AO052_00470;product=ABC transporter ATP-binding protein;protein_id=TMQ41503.1;transl_table=11
LNKO01000005.1	Genbank	gene	7999	9012	.	-	.	ID=gene-AO052_00475;Name=AO052_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00475
LNKO01000005.1	Protein Homology	CDS	7999	9012	.	-	0	ID=cds-TMQ41504.1;Parent=gene-AO052_00475;Dbxref=NCBI_GP:TMQ41504.1;Name=TMQ41504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525875.1;locus_tag=AO052_00475;product=ABC transporter permease;protein_id=TMQ41504.1;transl_table=11
LNKO01000005.1	Genbank	gene	8999	10054	.	-	.	ID=gene-AO052_00480;Name=AO052_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00480
LNKO01000005.1	Protein Homology	CDS	8999	10054	.	-	0	ID=cds-TMQ41505.1;Parent=gene-AO052_00480;Dbxref=NCBI_GP:TMQ41505.1;Name=TMQ41505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687818.1;locus_tag=AO052_00480;product=hypothetical protein;protein_id=TMQ41505.1;transl_table=11
LNKO01000005.1	Protein Homology	pseudogene	10122	10967	.	-	.	ID=gene-AO052_00485;Name=AO052_00485;Note=disrupted;description=pyrophosphorylase ModD;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00485;pseudo=true
LNKO01000005.1	Genbank	gene	10977	11576	.	-	.	ID=gene-AO052_00490;Name=AO052_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00490
LNKO01000005.1	Protein Homology	CDS	10977	11576	.	-	0	ID=cds-TMQ41506.1;Parent=gene-AO052_00490;Dbxref=NCBI_GP:TMQ41506.1;Name=TMQ41506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692938.1;locus_tag=AO052_00490;product=iron ABC transporter ATP-binding protein;protein_id=TMQ41506.1;transl_table=11
LNKO01000005.1	Genbank	gene	11578	12375	.	-	.	ID=gene-AO052_00495;Name=AO052_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00495
LNKO01000005.1	Protein Homology	CDS	11578	12375	.	-	0	ID=cds-TMQ41507.1;Parent=gene-AO052_00495;Dbxref=NCBI_GP:TMQ41507.1;Name=TMQ41507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550809.1;locus_tag=AO052_00495;product=ABC transporter;protein_id=TMQ41507.1;transl_table=11
LNKO01000005.1	Genbank	gene	12350	13087	.	-	.	ID=gene-AO052_00500;Name=AO052_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00500
LNKO01000005.1	Protein Homology	CDS	12350	13087	.	-	0	ID=cds-TMQ41508.1;Parent=gene-AO052_00500;Dbxref=NCBI_GP:TMQ41508.1;Name=TMQ41508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644652.1;locus_tag=AO052_00500;product=molybdate ABC transporter substrate-binding protein;protein_id=TMQ41508.1;transl_table=11
LNKO01000005.1	Genbank	gene	13274	14704	.	-	.	ID=gene-AO052_00505;Name=AO052_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00505
LNKO01000005.1	Protein Homology	CDS	13274	14704	.	-	0	ID=cds-TMQ41509.1;Parent=gene-AO052_00505;Dbxref=NCBI_GP:TMQ41509.1;Name=TMQ41509.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628930.1;locus_tag=AO052_00505;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=TMQ41509.1;transl_table=11
LNKO01000005.1	Genbank	gene	14801	15736	.	+	.	ID=gene-AO052_00510;Name=AO052_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00510
LNKO01000005.1	Protein Homology	CDS	14801	15736	.	+	0	ID=cds-TMQ41510.1;Parent=gene-AO052_00510;Dbxref=NCBI_GP:TMQ41510.1;Name=TMQ41510.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527712.1;locus_tag=AO052_00510;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=TMQ41510.1;transl_table=11
LNKO01000005.1	Genbank	gene	15810	17708	.	+	.	ID=gene-AO052_00515;Name=AO052_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00515
LNKO01000005.1	Protein Homology	CDS	15810	17708	.	+	0	ID=cds-TMQ41511.1;Parent=gene-AO052_00515;Dbxref=NCBI_GP:TMQ41511.1;Name=TMQ41511.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525880.1;locus_tag=AO052_00515;product=DNA topoisomerase IV subunit B;protein_id=TMQ41511.1;transl_table=11
LNKO01000005.1	Genbank	gene	17776	20010	.	+	.	ID=gene-AO052_00520;Name=AO052_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00520
LNKO01000005.1	Protein Homology	CDS	17776	20010	.	+	0	ID=cds-TMQ41512.1;Parent=gene-AO052_00520;Dbxref=NCBI_GP:TMQ41512.1;Name=TMQ41512.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525881.1;locus_tag=AO052_00520;product=DNA topoisomerase IV subunit A;protein_id=TMQ41512.1;transl_table=11
LNKO01000005.1	Genbank	gene	20052	21266	.	+	.	ID=gene-AO052_00525;Name=AO052_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00525
LNKO01000005.1	Protein Homology	CDS	20052	21266	.	+	0	ID=cds-TMQ41513.1;Parent=gene-AO052_00525;Dbxref=NCBI_GP:TMQ41513.1;Name=TMQ41513.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45240.1;locus_tag=AO052_00525;product=sodium:glutamate symporter;protein_id=TMQ41513.1;transl_table=11
LNKO01000005.1	Genbank	gene	21305	22213	.	-	.	ID=gene-AO052_00530;Name=AO052_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00530
LNKO01000005.1	Protein Homology	CDS	21305	22213	.	-	0	ID=cds-TMQ41514.1;Parent=gene-AO052_00530;Dbxref=NCBI_GP:TMQ41514.1;Name=TMQ41514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45241.1;locus_tag=AO052_00530;product=ribosomal protein S6 modification protein;protein_id=TMQ41514.1;transl_table=11
LNKO01000005.1	Genbank	gene	22329	22592	.	+	.	ID=gene-AO052_00535;Name=AO052_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00535
LNKO01000005.1	Protein Homology	CDS	22329	22592	.	+	0	ID=cds-TMQ41515.1;Parent=gene-AO052_00535;Dbxref=NCBI_GP:TMQ41515.1;Name=TMQ41515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45242.1;locus_tag=AO052_00535;product=glutaredoxin;protein_id=TMQ41515.1;transl_table=11
LNKO01000005.1	Genbank	gene	22659	23879	.	-	.	ID=gene-AO052_00540;Name=AO052_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00540
LNKO01000005.1	Protein Homology	CDS	22659	23879	.	-	0	ID=cds-TMQ41516.1;Parent=gene-AO052_00540;Dbxref=NCBI_GP:TMQ41516.1;Name=TMQ41516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687800.1;locus_tag=AO052_00540;product=3-oxoacyl-ACP synthase;protein_id=TMQ41516.1;transl_table=11
LNKO01000005.1	Genbank	gene	24028	25965	.	+	.	ID=gene-AO052_00545;Name=AO052_00545;end_range=25965,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00545;partial=true
LNKO01000005.1	Protein Homology	CDS	24028	25965	.	+	0	ID=cds-TMQ41517.1;Parent=gene-AO052_00545;Dbxref=NCBI_GP:TMQ41517.1;Name=TMQ41517.1;end_range=25965,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKP6.1;locus_tag=AO052_00545;partial=true;product=FAD-dependent cmnm(5)s(2)U34 oxidoreductase;protein_id=TMQ41517.1;transl_table=11
##sequence-region LNKO01000006.1 1 3582
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000006.1	Genbank	region	1	3582	.	+	.	ID=LNKO01000006.1:1..3582;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000006.1	Genbank	gene	236	3264	.	+	.	ID=gene-AO052_00550;Name=AO052_00550;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO052_00550
LNKO01000006.1	Genbank	rRNA	236	3264	.	+	.	ID=rna-AO052_00550;Parent=gene-AO052_00550;gbkey=rRNA;locus_tag=AO052_00550;product=23S ribosomal RNA
LNKO01000006.1	Genbank	exon	236	3264	.	+	.	ID=exon-AO052_00550-1;Parent=rna-AO052_00550;gbkey=rRNA;locus_tag=AO052_00550;product=23S ribosomal RNA
LNKO01000006.1	Genbank	gene	3479	3582	.	+	.	ID=gene-AO052_00555;Name=AO052_00555;end_range=3582,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO052_00555;partial=true
LNKO01000006.1	cmsearch	rRNA	3479	3582	.	+	.	ID=rna-AO052_00555;Parent=gene-AO052_00555;end_range=3582,.;gbkey=rRNA;locus_tag=AO052_00555;partial=true;product=5S ribosomal RNA
LNKO01000006.1	cmsearch	exon	3479	3582	.	+	.	ID=exon-AO052_00555-1;Parent=rna-AO052_00555;end_range=3582,.;gbkey=rRNA;locus_tag=AO052_00555;partial=true;product=5S ribosomal RNA
##sequence-region LNKO01000007.1 1 9584
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000007.1	Genbank	region	1	9584	.	+	.	ID=LNKO01000007.1:1..9584;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000007.1	Genbank	gene	245	754	.	+	.	ID=gene-AO052_00560;Name=AO052_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00560
LNKO01000007.1	Protein Homology	CDS	245	754	.	+	0	ID=cds-TMQ41458.1;Parent=gene-AO052_00560;Dbxref=NCBI_GP:TMQ41458.1;Name=TMQ41458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658670.1;locus_tag=AO052_00560;product=peptide deformylase;protein_id=TMQ41458.1;transl_table=11
LNKO01000007.1	Genbank	gene	830	1786	.	+	.	ID=gene-AO052_00565;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AO052_00565
LNKO01000007.1	Protein Homology	CDS	830	1786	.	+	0	ID=cds-TMQ41459.1;Parent=gene-AO052_00565;Dbxref=NCBI_GP:TMQ41459.1;Name=TMQ41459.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658672.1;locus_tag=AO052_00565;product=methionyl-tRNA formyltransferase;protein_id=TMQ41459.1;transl_table=11
LNKO01000007.1	Genbank	gene	1786	3141	.	+	.	ID=gene-AO052_00570;Name=AO052_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00570
LNKO01000007.1	Protein Homology	CDS	1786	3141	.	+	0	ID=cds-TMQ41460.1;Parent=gene-AO052_00570;Dbxref=NCBI_GP:TMQ41460.1;Name=TMQ41460.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44788.1;locus_tag=AO052_00570;product=16S rRNA methyltransferase;protein_id=TMQ41460.1;transl_table=11
LNKO01000007.1	Genbank	gene	3154	4530	.	+	.	ID=gene-AO052_00575;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=AO052_00575
LNKO01000007.1	Protein Homology	CDS	3154	4530	.	+	0	ID=cds-TMQ41461.1;Parent=gene-AO052_00575;Dbxref=NCBI_GP:TMQ41461.1;Name=TMQ41461.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:SwissProt:P71354.1;locus_tag=AO052_00575;product=potassium transporter peripheral membrane component;protein_id=TMQ41461.1;transl_table=11
LNKO01000007.1	Genbank	gene	4604	4990	.	+	.	ID=gene-AO052_00580;Name=AO052_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00580
LNKO01000007.1	Protein Homology	CDS	4604	4990	.	+	0	ID=cds-TMQ41462.1;Parent=gene-AO052_00580;Dbxref=NCBI_GP:TMQ41462.1;Name=TMQ41462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692969.1;locus_tag=AO052_00580;product=large-conductance mechanosensitive channel MscL;protein_id=TMQ41462.1;transl_table=11
LNKO01000007.1	Genbank	gene	5080	5337	.	+	.	ID=gene-AO052_00585;Name=AO052_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00585
LNKO01000007.1	Protein Homology	CDS	5080	5337	.	+	0	ID=cds-TMQ41463.1;Parent=gene-AO052_00585;Dbxref=NCBI_GP:TMQ41463.1;Name=TMQ41463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMW1.1;locus_tag=AO052_00585;product=hypothetical protein;protein_id=TMQ41463.1;transl_table=11
LNKO01000007.1	Genbank	gene	5446	6015	.	+	.	ID=gene-AO052_00590;Name=AO052_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00590
LNKO01000007.1	Protein Homology	CDS	5446	6015	.	+	0	ID=cds-TMQ41464.1;Parent=gene-AO052_00590;Dbxref=NCBI_GP:TMQ41464.1;Name=TMQ41464.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995292.1;locus_tag=AO052_00590;product=RNA polymerase sigma factor RpoE;protein_id=TMQ41464.1;transl_table=11
LNKO01000007.1	Genbank	gene	6040	6627	.	+	.	ID=gene-AO052_00595;Name=AO052_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00595
LNKO01000007.1	Protein Homology	CDS	6040	6627	.	+	0	ID=cds-TMQ41465.1;Parent=gene-AO052_00595;Dbxref=NCBI_GP:TMQ41465.1;Name=TMQ41465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701775.1;locus_tag=AO052_00595;product=transcriptional regulator;protein_id=TMQ41465.1;transl_table=11
LNKO01000007.1	Genbank	gene	6707	7657	.	+	.	ID=gene-AO052_00600;Name=AO052_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00600
LNKO01000007.1	Protein Homology	CDS	6707	7657	.	+	0	ID=cds-TMQ41466.1;Parent=gene-AO052_00600;Dbxref=NCBI_GP:TMQ41466.1;Name=TMQ41466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551139.1;locus_tag=AO052_00600;product=transcriptional regulator;protein_id=TMQ41466.1;transl_table=11
LNKO01000007.1	Genbank	gene	7748	8671	.	-	.	ID=gene-AO052_00605;Name=AO052_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00605
LNKO01000007.1	Protein Homology	CDS	7748	8671	.	-	0	ID=cds-TMQ41467.1;Parent=gene-AO052_00605;Dbxref=NCBI_GP:TMQ41467.1;Name=TMQ41467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655205.1;locus_tag=AO052_00605;product=type I pantothenate kinase;protein_id=TMQ41467.1;transl_table=11
LNKO01000007.1	Genbank	gene	8888	8963	.	+	.	ID=gene-AO052_00610;Name=AO052_00610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00610
LNKO01000007.1	tRNAscan-SE	tRNA	8888	8963	.	+	.	ID=rna-AO052_00610;Parent=gene-AO052_00610;anticodon=(pos:8921..8923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00610;product=tRNA-Thr
LNKO01000007.1	tRNAscan-SE	exon	8888	8963	.	+	.	ID=exon-AO052_00610-1;Parent=rna-AO052_00610;anticodon=(pos:8921..8923);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00610;product=tRNA-Thr
LNKO01000007.1	Genbank	gene	8993	9077	.	+	.	ID=gene-AO052_00615;Name=AO052_00615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00615
LNKO01000007.1	tRNAscan-SE	tRNA	8993	9077	.	+	.	ID=rna-AO052_00615;Parent=gene-AO052_00615;anticodon=(pos:9027..9029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00615;product=tRNA-Tyr
LNKO01000007.1	tRNAscan-SE	exon	8993	9077	.	+	.	ID=exon-AO052_00615-1;Parent=rna-AO052_00615;anticodon=(pos:9027..9029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00615;product=tRNA-Tyr
LNKO01000007.1	Genbank	gene	9120	9194	.	+	.	ID=gene-AO052_00620;Name=AO052_00620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00620
LNKO01000007.1	tRNAscan-SE	tRNA	9120	9194	.	+	.	ID=rna-AO052_00620;Parent=gene-AO052_00620;anticodon=(pos:9153..9155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00620;product=tRNA-Gly
LNKO01000007.1	tRNAscan-SE	exon	9120	9194	.	+	.	ID=exon-AO052_00620-1;Parent=rna-AO052_00620;anticodon=(pos:9153..9155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00620;product=tRNA-Gly
LNKO01000007.1	Genbank	gene	9198	9273	.	+	.	ID=gene-AO052_00625;Name=AO052_00625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_00625
LNKO01000007.1	tRNAscan-SE	tRNA	9198	9273	.	+	.	ID=rna-AO052_00625;Parent=gene-AO052_00625;anticodon=(pos:9231..9233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00625;product=tRNA-Thr
LNKO01000007.1	tRNAscan-SE	exon	9198	9273	.	+	.	ID=exon-AO052_00625-1;Parent=rna-AO052_00625;anticodon=(pos:9231..9233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_00625;product=tRNA-Thr
LNKO01000007.1	Genbank	pseudogene	9378	9584	.	+	.	ID=gene-AO052_00630;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO052_00630;pseudo=true
LNKO01000007.1	Protein Homology	CDS	9378	9584	.	+	0	ID=cds-AO052_00630;Parent=gene-AO052_00630;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001426213.1;locus_tag=AO052_00630;pseudo=true;transl_table=11
##sequence-region LNKO01000008.1 1 5796
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000008.1	Genbank	region	1	5796	.	+	.	ID=LNKO01000008.1:1..5796;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000008.1	Genbank	gene	397	597	.	+	.	ID=gene-AO052_00635;Name=AO052_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00635
LNKO01000008.1	GeneMarkS+	CDS	397	597	.	+	0	ID=cds-TMQ41433.1;Parent=gene-AO052_00635;Dbxref=NCBI_GP:TMQ41433.1;Name=TMQ41433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_00635;product=hypothetical protein;protein_id=TMQ41433.1;transl_table=11
LNKO01000008.1	Genbank	gene	585	1196	.	+	.	ID=gene-AO052_00640;Name=AO052_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00640
LNKO01000008.1	Protein Homology	CDS	585	1196	.	+	0	ID=cds-TMQ41434.1;Parent=gene-AO052_00640;Dbxref=NCBI_GP:TMQ41434.1;Name=TMQ41434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642482.1;locus_tag=AO052_00640;product=resolvase;protein_id=TMQ41434.1;transl_table=11
LNKO01000008.1	Genbank	gene	1278	2213	.	-	.	ID=gene-AO052_00645;Name=AO052_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00645
LNKO01000008.1	Protein Homology	CDS	1278	2213	.	-	0	ID=cds-TMQ41435.1;Parent=gene-AO052_00645;Dbxref=NCBI_GP:TMQ41435.1;Name=TMQ41435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642484.1;locus_tag=AO052_00645;product=cell filamentation protein Fic;protein_id=TMQ41435.1;transl_table=11
LNKO01000008.1	Genbank	gene	2194	2373	.	-	.	ID=gene-AO052_00650;Name=AO052_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00650
LNKO01000008.1	Protein Homology	CDS	2194	2373	.	-	0	ID=cds-TMQ41436.1;Parent=gene-AO052_00650;Dbxref=NCBI_GP:TMQ41436.1;Name=TMQ41436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167582.1;locus_tag=AO052_00650;product=hypothetical protein;protein_id=TMQ41436.1;transl_table=11
LNKO01000008.1	Genbank	gene	2383	2706	.	-	.	ID=gene-AO052_00655;Name=AO052_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00655
LNKO01000008.1	Protein Homology	CDS	2383	2706	.	-	0	ID=cds-TMQ41437.1;Parent=gene-AO052_00655;Dbxref=NCBI_GP:TMQ41437.1;Name=TMQ41437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005566970.1%2CRefSeq:WP_019518167.1;locus_tag=AO052_00655;product=hypothetical protein;protein_id=TMQ41437.1;transl_table=11
LNKO01000008.1	Genbank	gene	2699	2950	.	-	.	ID=gene-AO052_00660;Name=AO052_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00660
LNKO01000008.1	Protein Homology	CDS	2699	2950	.	-	0	ID=cds-TMQ41442.1;Parent=gene-AO052_00660;Dbxref=NCBI_GP:TMQ41442.1;Name=TMQ41442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005566968.1;locus_tag=AO052_00660;product=hypothetical protein;protein_id=TMQ41442.1;transl_table=11
LNKO01000008.1	Genbank	gene	3171	3809	.	-	.	ID=gene-AO052_00665;Name=AO052_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00665
LNKO01000008.1	Protein Homology	CDS	3171	3809	.	-	0	ID=cds-TMQ41438.1;Parent=gene-AO052_00665;Dbxref=NCBI_GP:TMQ41438.1;Name=TMQ41438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008989867.1;locus_tag=AO052_00665;product=hypothetical protein;protein_id=TMQ41438.1;transl_table=11
LNKO01000008.1	Genbank	gene	3926	4486	.	-	.	ID=gene-AO052_00670;Name=AO052_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00670
LNKO01000008.1	Protein Homology	CDS	3926	4486	.	-	0	ID=cds-TMQ41439.1;Parent=gene-AO052_00670;Dbxref=NCBI_GP:TMQ41439.1;Name=TMQ41439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638149.1;locus_tag=AO052_00670;product=hypothetical protein;protein_id=TMQ41439.1;transl_table=11
LNKO01000008.1	Genbank	gene	4744	5013	.	-	.	ID=gene-AO052_00675;Name=AO052_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00675
LNKO01000008.1	Protein Homology	CDS	4744	5013	.	-	0	ID=cds-TMQ41440.1;Parent=gene-AO052_00675;Dbxref=NCBI_GP:TMQ41440.1;Name=TMQ41440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018346821.1;locus_tag=AO052_00675;product=hypothetical protein;protein_id=TMQ41440.1;transl_table=11
LNKO01000008.1	Genbank	gene	5136	5714	.	-	.	ID=gene-AO052_00680;Name=AO052_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00680
LNKO01000008.1	GeneMarkS+	CDS	5136	5714	.	-	0	ID=cds-TMQ41441.1;Parent=gene-AO052_00680;Dbxref=NCBI_GP:TMQ41441.1;Name=TMQ41441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_00680;product=hypothetical protein;protein_id=TMQ41441.1;transl_table=11
##sequence-region LNKO01000009.1 1 4374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000009.1	Genbank	region	1	4374	.	+	.	ID=LNKO01000009.1:1..4374;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000009.1	Genbank	pseudogene	1	343	.	+	.	ID=gene-AO052_00685;Name=AO052_00685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00685;pseudo=true
LNKO01000009.1	Protein Homology	CDS	1	343	.	+	1	ID=cds-AO052_00685;Parent=gene-AO052_00685;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655294.1;locus_tag=AO052_00685;pseudo=true;transl_table=11
LNKO01000009.1	Genbank	pseudogene	486	725	.	+	.	ID=gene-AO052_00690;Name=AO052_00690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00690;pseudo=true
LNKO01000009.1	Protein Homology	CDS	486	725	.	+	0	ID=cds-AO052_00690;Parent=gene-AO052_00690;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526157.1;locus_tag=AO052_00690;pseudo=true;transl_table=11
LNKO01000009.1	Genbank	gene	712	1716	.	+	.	ID=gene-AO052_00695;Name=AO052_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00695
LNKO01000009.1	Protein Homology	CDS	712	1716	.	+	0	ID=cds-TMQ41390.1;Parent=gene-AO052_00695;Dbxref=NCBI_GP:TMQ41390.1;Name=TMQ41390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647097.1;locus_tag=AO052_00695;product=I protein;protein_id=TMQ41390.1;transl_table=11
LNKO01000009.1	Genbank	gene	1716	2636	.	+	.	ID=gene-AO052_00700;Name=AO052_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00700
LNKO01000009.1	Protein Homology	CDS	1716	2636	.	+	0	ID=cds-TMQ41391.1;Parent=gene-AO052_00700;Dbxref=NCBI_GP:TMQ41391.1;Name=TMQ41391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526155.1;locus_tag=AO052_00700;product=head protein;protein_id=TMQ41391.1;transl_table=11
LNKO01000009.1	Genbank	gene	2672	3007	.	+	.	ID=gene-AO052_00705;Name=AO052_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00705
LNKO01000009.1	Protein Homology	CDS	2672	3007	.	+	0	ID=cds-TMQ41392.1;Parent=gene-AO052_00705;Dbxref=NCBI_GP:TMQ41392.1;Name=TMQ41392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526154.1;locus_tag=AO052_00705;product=hypothetical protein;protein_id=TMQ41392.1;transl_table=11
LNKO01000009.1	Genbank	gene	3017	3448	.	+	.	ID=gene-AO052_00710;Name=AO052_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00710
LNKO01000009.1	Protein Homology	CDS	3017	3448	.	+	0	ID=cds-TMQ41393.1;Parent=gene-AO052_00710;Dbxref=NCBI_GP:TMQ41393.1;Name=TMQ41393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688547.1;locus_tag=AO052_00710;product=hypothetical protein;protein_id=TMQ41393.1;transl_table=11
LNKO01000009.1	Genbank	pseudogene	3432	3629	.	+	.	ID=gene-AO052_00715;Name=AO052_00715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00715;pseudo=true
LNKO01000009.1	Protein Homology	CDS	3432	3629	.	+	0	ID=cds-AO052_00715;Parent=gene-AO052_00715;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646950.1;locus_tag=AO052_00715;pseudo=true;transl_table=11
LNKO01000009.1	Genbank	gene	4036	4374	.	+	.	ID=gene-AO052_00720;Name=AO052_00720;end_range=4374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00720;partial=true
LNKO01000009.1	Protein Homology	CDS	4036	4374	.	+	0	ID=cds-TMQ41394.1;Parent=gene-AO052_00720;Dbxref=NCBI_GP:TMQ41394.1;Name=TMQ41394.1;end_range=4374,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690062.1;locus_tag=AO052_00720;partial=true;product=hypothetical protein;protein_id=TMQ41394.1;transl_table=11
##sequence-region LNKO01000010.1 1 2714
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000010.1	Genbank	region	1	2714	.	+	.	ID=LNKO01000010.1:1..2714;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000010.1	Genbank	gene	1	984	.	+	.	ID=gene-AO052_00725;Name=AO052_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00725;partial=true;start_range=.,1
LNKO01000010.1	Protein Homology	CDS	1	984	.	+	0	ID=cds-TMQ41368.1;Parent=gene-AO052_00725;Dbxref=NCBI_GP:TMQ41368.1;Name=TMQ41368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525885.1;locus_tag=AO052_00725;partial=true;product=protein licA;protein_id=TMQ41368.1;start_range=.,1;transl_table=11
LNKO01000010.1	Genbank	gene	984	1862	.	+	.	ID=gene-AO052_00730;Name=AO052_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00730
LNKO01000010.1	Protein Homology	CDS	984	1862	.	+	0	ID=cds-TMQ41369.1;Parent=gene-AO052_00730;Dbxref=NCBI_GP:TMQ41369.1;Name=TMQ41369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632346.1;locus_tag=AO052_00730;product=protein licB;protein_id=TMQ41369.1;transl_table=11
LNKO01000010.1	Genbank	gene	1859	2560	.	+	.	ID=gene-AO052_00735;Name=AO052_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00735
LNKO01000010.1	Protein Homology	CDS	1859	2560	.	+	0	ID=cds-TMQ41370.1;Parent=gene-AO052_00735;Dbxref=NCBI_GP:TMQ41370.1;Name=TMQ41370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656836.1;locus_tag=AO052_00735;product=protein licC;protein_id=TMQ41370.1;transl_table=11
##sequence-region LNKO01000011.1 1 2849
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000011.1	Genbank	region	1	2849	.	+	.	ID=LNKO01000011.1:1..2849;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000011.1	Genbank	pseudogene	1	145	.	+	.	ID=gene-AO052_00740;Name=AO052_00740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00740;pseudo=true
LNKO01000011.1	Protein Homology	CDS	1	145	.	+	1	ID=cds-AO052_00740;Parent=gene-AO052_00740;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525915.1;locus_tag=AO052_00740;pseudo=true;transl_table=11
LNKO01000011.1	Genbank	gene	595	912	.	+	.	ID=gene-AO052_00745;Name=AO052_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00745
LNKO01000011.1	Protein Homology	CDS	595	912	.	+	0	ID=cds-TMQ41349.1;Parent=gene-AO052_00745;Dbxref=NCBI_GP:TMQ41349.1;Name=TMQ41349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996118.1;locus_tag=AO052_00745;product=integrase;protein_id=TMQ41349.1;transl_table=11
LNKO01000011.1	Genbank	gene	1370	1594	.	+	.	ID=gene-AO052_00750;Name=AO052_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00750
LNKO01000011.1	Protein Homology	CDS	1370	1594	.	+	0	ID=cds-TMQ41350.1;Parent=gene-AO052_00750;Dbxref=NCBI_GP:TMQ41350.1;Name=TMQ41350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272601.1;locus_tag=AO052_00750;product=hypothetical protein;protein_id=TMQ41350.1;transl_table=11
LNKO01000011.1	Genbank	gene	1867	2337	.	-	.	ID=gene-AO052_00755;Name=AO052_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00755
LNKO01000011.1	Protein Homology	CDS	1867	2337	.	-	0	ID=cds-TMQ41351.1;Parent=gene-AO052_00755;Dbxref=NCBI_GP:TMQ41351.1;Name=TMQ41351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996123.1;locus_tag=AO052_00755;product=pyruvate kinase;protein_id=TMQ41351.1;transl_table=11
LNKO01000011.1	Genbank	gene	2331	2570	.	+	.	ID=gene-AO052_00760;Name=AO052_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00760
LNKO01000011.1	Protein Homology	CDS	2331	2570	.	+	0	ID=cds-TMQ41352.1;Parent=gene-AO052_00760;Dbxref=NCBI_GP:TMQ41352.1;Name=TMQ41352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525912.1;locus_tag=AO052_00760;product=hypothetical protein;protein_id=TMQ41352.1;transl_table=11
LNKO01000011.1	Genbank	pseudogene	2582	2849	.	+	.	ID=gene-AO052_00765;Name=AO052_00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00765;pseudo=true
LNKO01000011.1	Protein Homology	CDS	2582	2849	.	+	0	ID=cds-AO052_00765;Parent=gene-AO052_00765;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525911.1;locus_tag=AO052_00765;pseudo=true;transl_table=11
##sequence-region LNKO01000012.1 1 15125
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000012.1	Genbank	region	1	15125	.	+	.	ID=LNKO01000012.1:1..15125;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000012.1	Genbank	gene	1	868	.	-	.	ID=gene-AO052_00770;Name=AO052_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00770;partial=true;start_range=.,1
LNKO01000012.1	Protein Homology	CDS	1	868	.	-	0	ID=cds-TMQ41305.1;Parent=gene-AO052_00770;Dbxref=NCBI_GP:TMQ41305.1;Name=TMQ41305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527857.1;locus_tag=AO052_00770;partial=true;product=phage head morphogenesis protein;protein_id=TMQ41305.1;start_range=.,1;transl_table=11
LNKO01000012.1	Protein Homology	pseudogene	852	2473	.	-	.	ID=gene-AO052_00775;Name=AO052_00775;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00775;pseudo=true
LNKO01000012.1	Genbank	gene	2553	4202	.	-	.	ID=gene-AO052_00780;Name=AO052_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00780
LNKO01000012.1	Protein Homology	CDS	2553	4202	.	-	0	ID=cds-TMQ41306.1;Parent=gene-AO052_00780;Dbxref=NCBI_GP:TMQ41306.1;Name=TMQ41306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526159.1;locus_tag=AO052_00780;product=hypothetical protein;protein_id=TMQ41306.1;transl_table=11
LNKO01000012.1	Genbank	gene	4352	4852	.	-	.	ID=gene-AO052_00785;Name=AO052_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00785
LNKO01000012.1	Protein Homology	CDS	4352	4852	.	-	0	ID=cds-TMQ41307.1;Parent=gene-AO052_00785;Dbxref=NCBI_GP:TMQ41307.1;Name=TMQ41307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526160.1;locus_tag=AO052_00785;product=DNA-binding protein;protein_id=TMQ41307.1;transl_table=11
LNKO01000012.1	Genbank	gene	4854	5120	.	-	.	ID=gene-AO052_00790;Name=AO052_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00790
LNKO01000012.1	Protein Homology	CDS	4854	5120	.	-	0	ID=cds-TMQ41308.1;Parent=gene-AO052_00790;Dbxref=NCBI_GP:TMQ41308.1;Name=TMQ41308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995441.1;locus_tag=AO052_00790;product=hypothetical protein;protein_id=TMQ41308.1;transl_table=11
LNKO01000012.1	Genbank	gene	5120	5377	.	-	.	ID=gene-AO052_00795;Name=AO052_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00795
LNKO01000012.1	Protein Homology	CDS	5120	5377	.	-	0	ID=cds-TMQ41309.1;Parent=gene-AO052_00795;Dbxref=NCBI_GP:TMQ41309.1;Name=TMQ41309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688566.1;locus_tag=AO052_00795;product=hypothetical protein;protein_id=TMQ41309.1;transl_table=11
LNKO01000012.1	Genbank	gene	5501	5758	.	-	.	ID=gene-AO052_00800;Name=AO052_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00800
LNKO01000012.1	Protein Homology	CDS	5501	5758	.	-	0	ID=cds-TMQ41310.1;Parent=gene-AO052_00800;Dbxref=NCBI_GP:TMQ41310.1;Name=TMQ41310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688568.1;locus_tag=AO052_00800;product=hypothetical protein;protein_id=TMQ41310.1;transl_table=11
LNKO01000012.1	Genbank	gene	5758	6048	.	-	.	ID=gene-AO052_00805;Name=AO052_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00805
LNKO01000012.1	Protein Homology	CDS	5758	6048	.	-	0	ID=cds-TMQ41311.1;Parent=gene-AO052_00805;Dbxref=NCBI_GP:TMQ41311.1;Name=TMQ41311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526162.1;locus_tag=AO052_00805;product=hypothetical protein;protein_id=TMQ41311.1;transl_table=11
LNKO01000012.1	Genbank	gene	6202	6705	.	-	.	ID=gene-AO052_00810;Name=AO052_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00810
LNKO01000012.1	Protein Homology	CDS	6202	6705	.	-	0	ID=cds-TMQ41312.1;Parent=gene-AO052_00810;Dbxref=NCBI_GP:TMQ41312.1;Name=TMQ41312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688575.1;locus_tag=AO052_00810;product=hypothetical protein;protein_id=TMQ41312.1;transl_table=11
LNKO01000012.1	Genbank	gene	6786	7214	.	-	.	ID=gene-AO052_00815;Name=AO052_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00815
LNKO01000012.1	Protein Homology	CDS	6786	7214	.	-	0	ID=cds-TMQ41313.1;Parent=gene-AO052_00815;Dbxref=NCBI_GP:TMQ41313.1;Name=TMQ41313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641517.1;locus_tag=AO052_00815;product=mor transcription activator family protein;protein_id=TMQ41313.1;transl_table=11
LNKO01000012.1	Genbank	gene	7326	7742	.	-	.	ID=gene-AO052_00820;Name=AO052_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00820
LNKO01000012.1	Protein Homology	CDS	7326	7742	.	-	0	ID=cds-TMQ41314.1;Parent=gene-AO052_00820;Dbxref=NCBI_GP:TMQ41314.1;Name=TMQ41314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526165.1;locus_tag=AO052_00820;product=transcriptional regulator;protein_id=TMQ41314.1;transl_table=11
LNKO01000012.1	Genbank	gene	7797	7973	.	-	.	ID=gene-AO052_00825;Name=AO052_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00825
LNKO01000012.1	Protein Homology	CDS	7797	7973	.	-	0	ID=cds-TMQ41315.1;Parent=gene-AO052_00825;Dbxref=NCBI_GP:TMQ41315.1;Name=TMQ41315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010848235.1;locus_tag=AO052_00825;product=mRNA interferase;protein_id=TMQ41315.1;transl_table=11
LNKO01000012.1	Genbank	gene	8099	8317	.	-	.	ID=gene-AO052_00830;Name=AO052_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00830
LNKO01000012.1	Protein Homology	CDS	8099	8317	.	-	0	ID=cds-TMQ41316.1;Parent=gene-AO052_00830;Dbxref=NCBI_GP:TMQ41316.1;Name=TMQ41316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641522.1;locus_tag=AO052_00830;product=hypothetical protein;protein_id=TMQ41316.1;transl_table=11
LNKO01000012.1	Genbank	gene	8328	8969	.	-	.	ID=gene-AO052_00835;Name=AO052_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00835
LNKO01000012.1	Protein Homology	CDS	8328	8969	.	-	0	ID=cds-TMQ41317.1;Parent=gene-AO052_00835;Dbxref=NCBI_GP:TMQ41317.1;Name=TMQ41317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526166.1;locus_tag=AO052_00835;product=antirepressor;protein_id=TMQ41317.1;transl_table=11
LNKO01000012.1	Genbank	gene	9506	9709	.	-	.	ID=gene-AO052_00840;Name=AO052_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00840
LNKO01000012.1	Protein Homology	CDS	9506	9709	.	-	0	ID=cds-TMQ41318.1;Parent=gene-AO052_00840;Dbxref=NCBI_GP:TMQ41318.1;Name=TMQ41318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013796058.1;locus_tag=AO052_00840;product=hypothetical protein;protein_id=TMQ41318.1;transl_table=11
LNKO01000012.1	Genbank	gene	9736	10134	.	-	.	ID=gene-AO052_00845;Name=AO052_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00845
LNKO01000012.1	Protein Homology	CDS	9736	10134	.	-	0	ID=cds-TMQ41319.1;Parent=gene-AO052_00845;Dbxref=NCBI_GP:TMQ41319.1;Name=TMQ41319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996625.1;locus_tag=AO052_00845;product=hypothetical protein;protein_id=TMQ41319.1;transl_table=11
LNKO01000012.1	Genbank	gene	10375	10623	.	-	.	ID=gene-AO052_00850;Name=AO052_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00850
LNKO01000012.1	Protein Homology	CDS	10375	10623	.	-	0	ID=cds-TMQ41320.1;Parent=gene-AO052_00850;Dbxref=NCBI_GP:TMQ41320.1;Name=TMQ41320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996624.1;locus_tag=AO052_00850;product=hypothetical protein;protein_id=TMQ41320.1;transl_table=11
LNKO01000012.1	Genbank	gene	10628	10801	.	-	.	ID=gene-AO052_00855;Name=AO052_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00855
LNKO01000012.1	Protein Homology	CDS	10628	10801	.	-	0	ID=cds-TMQ41321.1;Parent=gene-AO052_00855;Dbxref=NCBI_GP:TMQ41321.1;Name=TMQ41321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758675.1;locus_tag=AO052_00855;product=FMN-dependent NADH-azoreductase;protein_id=TMQ41321.1;transl_table=11
LNKO01000012.1	Genbank	gene	10973	11170	.	-	.	ID=gene-AO052_00860;Name=AO052_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00860
LNKO01000012.1	Protein Homology	CDS	10973	11170	.	-	0	ID=cds-TMQ41322.1;Parent=gene-AO052_00860;Dbxref=NCBI_GP:TMQ41322.1;Name=TMQ41322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641531.1;locus_tag=AO052_00860;product=hypothetical protein;protein_id=TMQ41322.1;transl_table=11
LNKO01000012.1	Genbank	gene	11357	11974	.	-	.	ID=gene-AO052_00865;Name=AO052_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00865
LNKO01000012.1	Protein Homology	CDS	11357	11974	.	-	0	ID=cds-TMQ41323.1;Parent=gene-AO052_00865;Dbxref=NCBI_GP:TMQ41323.1;Name=TMQ41323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526168.1;locus_tag=AO052_00865;product=sulfate transporter;protein_id=TMQ41323.1;transl_table=11
LNKO01000012.1	Genbank	gene	11975	12166	.	-	.	ID=gene-AO052_00870;Name=AO052_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00870
LNKO01000012.1	Protein Homology	CDS	11975	12166	.	-	0	ID=cds-TMQ41324.1;Parent=gene-AO052_00870;Dbxref=NCBI_GP:TMQ41324.1;Name=TMQ41324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688597.1;locus_tag=AO052_00870;product=hypothetical protein;protein_id=TMQ41324.1;transl_table=11
LNKO01000012.1	Genbank	gene	12175	12471	.	-	.	ID=gene-AO052_00875;Name=AO052_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00875
LNKO01000012.1	Protein Homology	CDS	12175	12471	.	-	0	ID=cds-TMQ41325.1;Parent=gene-AO052_00875;Dbxref=NCBI_GP:TMQ41325.1;Name=TMQ41325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527864.1;locus_tag=AO052_00875;product=sulfate transporter;protein_id=TMQ41325.1;transl_table=11
LNKO01000012.1	Protein Homology	pseudogene	12483	13363	.	-	.	ID=gene-AO052_00880;Name=AO052_00880;Note=disrupted;description=transcriptional regulator;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00880;pseudo=true
LNKO01000012.1	Genbank	gene	13415	13813	.	-	.	ID=gene-AO052_00885;Name=AO052_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00885
LNKO01000012.1	GeneMarkS+	CDS	13415	13813	.	-	0	ID=cds-TMQ41326.1;Parent=gene-AO052_00885;Dbxref=NCBI_GP:TMQ41326.1;Name=TMQ41326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_00885;product=hypothetical protein;protein_id=TMQ41326.1;transl_table=11
LNKO01000012.1	Genbank	gene	13824	15125	.	-	.	ID=gene-AO052_00890;Name=AO052_00890;end_range=15125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00890;partial=true
LNKO01000012.1	Protein Homology	CDS	13824	15125	.	-	0	ID=cds-TMQ41327.1;Parent=gene-AO052_00890;Dbxref=NCBI_GP:TMQ41327.1;Name=TMQ41327.1;end_range=15125,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526171.1;locus_tag=AO052_00890;partial=true;product=transposase;protein_id=TMQ41327.1;transl_table=11
##sequence-region LNKO01000013.1 1 57596
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000013.1	Genbank	region	1	57596	.	+	.	ID=LNKO01000013.1:1..57596;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000013.1	Genbank	pseudogene	1	609	.	-	.	ID=gene-AO052_00895;Name=AO052_00895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_00895;pseudo=true
LNKO01000013.1	Protein Homology	CDS	1	609	.	-	0	ID=cds-AO052_00895;Parent=gene-AO052_00895;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526171.1;locus_tag=AO052_00895;pseudo=true;transl_table=11
LNKO01000013.1	Genbank	gene	653	931	.	-	.	ID=gene-AO052_00900;Name=AO052_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00900
LNKO01000013.1	Protein Homology	CDS	653	931	.	-	0	ID=cds-TMQ41218.1;Parent=gene-AO052_00900;Dbxref=NCBI_GP:TMQ41218.1;Name=TMQ41218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761255.1;locus_tag=AO052_00900;product=DNA-binding protein;protein_id=TMQ41218.1;transl_table=11
LNKO01000013.1	Genbank	gene	1107	1823	.	+	.	ID=gene-AO052_00905;Name=AO052_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00905
LNKO01000013.1	Protein Homology	CDS	1107	1823	.	+	0	ID=cds-TMQ41219.1;Parent=gene-AO052_00905;Dbxref=NCBI_GP:TMQ41219.1;Name=TMQ41219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761253.1;locus_tag=AO052_00905;product=repressor;protein_id=TMQ41219.1;transl_table=11
LNKO01000013.1	Genbank	pseudogene	2416	2850	.	+	.	ID=gene-AO052_00910;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=AO052_00910;pseudo=true
LNKO01000013.1	Protein Homology	CDS	2416	2850	.	+	0	ID=cds-AO052_00910;Parent=gene-AO052_00910;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;inference=EXISTENCE: similar to AA sequence:SwissProt:P44083.1;locus_tag=AO052_00910;pseudo=true;transl_table=11
LNKO01000013.1	Genbank	gene	3215	3889	.	-	.	ID=gene-AO052_00915;Name=AO052_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00915
LNKO01000013.1	Protein Homology	CDS	3215	3889	.	-	0	ID=cds-TMQ41220.1;Parent=gene-AO052_00915;Dbxref=NCBI_GP:TMQ41220.1;Name=TMQ41220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690900.1;locus_tag=AO052_00915;product=cyclic AMP receptor protein;protein_id=TMQ41220.1;transl_table=11
LNKO01000013.1	Genbank	gene	3874	4125	.	-	.	ID=gene-AO052_00920;Name=AO052_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00920
LNKO01000013.1	Protein Homology	CDS	3874	4125	.	-	0	ID=cds-TMQ41221.1;Parent=gene-AO052_00920;Dbxref=NCBI_GP:TMQ41221.1;Name=TMQ41221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633331.1;locus_tag=AO052_00920;product=hypothetical protein;protein_id=TMQ41221.1;transl_table=11
LNKO01000013.1	Genbank	gene	4147	4803	.	-	.	ID=gene-AO052_00925;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=AO052_00925
LNKO01000013.1	Protein Homology	CDS	4147	4803	.	-	0	ID=cds-TMQ41222.1;Parent=gene-AO052_00925;Dbxref=NCBI_GP:TMQ41222.1;Name=TMQ41222.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550996.1;locus_tag=AO052_00925;product=division inhibitor protein;protein_id=TMQ41222.1;transl_table=11
LNKO01000013.1	Genbank	gene	4807	5262	.	-	.	ID=gene-AO052_00930;Name=AO052_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00930
LNKO01000013.1	Protein Homology	CDS	4807	5262	.	-	0	ID=cds-TMQ41223.1;Parent=gene-AO052_00930;Dbxref=NCBI_GP:TMQ41223.1;Name=TMQ41223.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550997.1;locus_tag=AO052_00930;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=TMQ41223.1;transl_table=11
LNKO01000013.1	Genbank	gene	5310	6512	.	-	.	ID=gene-AO052_00935;Name=AO052_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00935
LNKO01000013.1	Protein Homology	CDS	5310	6512	.	-	0	ID=cds-TMQ41224.1;Parent=gene-AO052_00935;Dbxref=NCBI_GP:TMQ41224.1;Name=TMQ41224.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055320.1;locus_tag=AO052_00935;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=TMQ41224.1;transl_table=11
LNKO01000013.1	Genbank	gene	6675	7340	.	+	.	ID=gene-AO052_00940;Name=AO052_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00940
LNKO01000013.1	Protein Homology	CDS	6675	7340	.	+	0	ID=cds-TMQ41225.1;Parent=gene-AO052_00940;Dbxref=NCBI_GP:TMQ41225.1;Name=TMQ41225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLV5.2;locus_tag=AO052_00940;product=hypothetical protein;protein_id=TMQ41225.1;transl_table=11
LNKO01000013.1	Genbank	gene	7554	7790	.	+	.	ID=gene-AO052_00945;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AO052_00945
LNKO01000013.1	Protein Homology	CDS	7554	7790	.	+	0	ID=cds-TMQ41226.1;Parent=gene-AO052_00945;Dbxref=NCBI_GP:TMQ41226.1;Name=TMQ41226.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018347033.1;locus_tag=AO052_00945;product=50S ribosomal protein L28;protein_id=TMQ41226.1;transl_table=11
LNKO01000013.1	Genbank	gene	7802	7972	.	+	.	ID=gene-AO052_00950;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AO052_00950
LNKO01000013.1	Protein Homology	CDS	7802	7972	.	+	0	ID=cds-TMQ41227.1;Parent=gene-AO052_00950;Dbxref=NCBI_GP:TMQ41227.1;Name=TMQ41227.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:SwissProt:B8F859.1;locus_tag=AO052_00950;product=50S ribosomal protein L33;protein_id=TMQ41227.1;transl_table=11
LNKO01000013.1	Genbank	gene	8320	9684	.	+	.	ID=gene-AO052_00955;Name=AO052_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00955
LNKO01000013.1	Protein Homology	CDS	8320	9684	.	+	0	ID=cds-TMQ41228.1;Parent=gene-AO052_00955;Dbxref=NCBI_GP:TMQ41228.1;Name=TMQ41228.1;Note=catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686211.1;locus_tag=AO052_00955;product=diaminobutyrate--2-oxoglutarate aminotransferase;protein_id=TMQ41228.1;transl_table=11
LNKO01000013.1	Genbank	gene	9875	11410	.	+	.	ID=gene-AO052_00960;Name=AO052_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00960
LNKO01000013.1	Protein Homology	CDS	9875	11410	.	+	0	ID=cds-TMQ41229.1;Parent=gene-AO052_00960;Dbxref=NCBI_GP:TMQ41229.1;Name=TMQ41229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664170.1;locus_tag=AO052_00960;product=2%2C4-diaminobutyrate decarboxylase;protein_id=TMQ41229.1;transl_table=11
LNKO01000013.1	Genbank	gene	11645	12460	.	+	.	ID=gene-AO052_00965;Name=AO052_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00965
LNKO01000013.1	Protein Homology	CDS	11645	12460	.	+	0	ID=cds-TMQ41230.1;Parent=gene-AO052_00965;Dbxref=NCBI_GP:TMQ41230.1;Name=TMQ41230.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44948.3;locus_tag=AO052_00965;product=formamidopyrimidine-DNA glycosylase;protein_id=TMQ41230.1;transl_table=11
LNKO01000013.1	Genbank	gene	12534	13556	.	-	.	ID=gene-AO052_00970;Name=AO052_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00970
LNKO01000013.1	Protein Homology	CDS	12534	13556	.	-	0	ID=cds-TMQ41231.1;Parent=gene-AO052_00970;Dbxref=NCBI_GP:TMQ41231.1;Name=TMQ41231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651554.1;locus_tag=AO052_00970;product=peptidase;protein_id=TMQ41231.1;transl_table=11
LNKO01000013.1	Genbank	gene	13557	14675	.	-	.	ID=gene-AO052_00975;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AO052_00975
LNKO01000013.1	Protein Homology	CDS	13557	14675	.	-	0	ID=cds-TMQ41232.1;Parent=gene-AO052_00975;Dbxref=NCBI_GP:TMQ41232.1;Name=TMQ41232.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526178.1;locus_tag=AO052_00975;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=TMQ41232.1;transl_table=11
LNKO01000013.1	Genbank	gene	14678	15127	.	-	.	ID=gene-AO052_00980;Name=AO052_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00980
LNKO01000013.1	Protein Homology	CDS	14678	15127	.	-	0	ID=cds-TMQ41233.1;Parent=gene-AO052_00980;Dbxref=NCBI_GP:TMQ41233.1;Name=TMQ41233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527273.1;locus_tag=AO052_00980;product=NrdR family transcriptional regulator;protein_id=TMQ41233.1;transl_table=11
LNKO01000013.1	Genbank	gene	15182	18562	.	-	.	ID=gene-AO052_00985;Name=AO052_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00985
LNKO01000013.1	Protein Homology	CDS	15182	18562	.	-	0	ID=cds-TMQ41234.1;Parent=gene-AO052_00985;Dbxref=NCBI_GP:TMQ41234.1;Name=TMQ41234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701956.1;locus_tag=AO052_00985;product=exodeoxyribonuclease V subunit gamma;protein_id=TMQ41234.1;transl_table=11
LNKO01000013.1	Genbank	gene	18608	18895	.	-	.	ID=gene-AO052_00990;Name=AO052_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00990
LNKO01000013.1	Protein Homology	CDS	18608	18895	.	-	0	ID=cds-TMQ41235.1;Parent=gene-AO052_00990;Dbxref=NCBI_GP:TMQ41235.1;Name=TMQ41235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648029.1;locus_tag=AO052_00990;product=hypothetical protein;protein_id=TMQ41235.1;transl_table=11
LNKO01000013.1	Genbank	gene	18888	19571	.	-	.	ID=gene-AO052_00995;Name=AO052_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_00995
LNKO01000013.1	Protein Homology	CDS	18888	19571	.	-	0	ID=cds-TMQ41236.1;Parent=gene-AO052_00995;Dbxref=NCBI_GP:TMQ41236.1;Name=TMQ41236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526181.1;locus_tag=AO052_00995;product=hypothetical protein;protein_id=TMQ41236.1;transl_table=11
LNKO01000013.1	Genbank	gene	19586	20302	.	-	.	ID=gene-AO052_01000;Name=AO052_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01000
LNKO01000013.1	Protein Homology	CDS	19586	20302	.	-	0	ID=cds-TMQ41237.1;Parent=gene-AO052_01000;Dbxref=NCBI_GP:TMQ41237.1;Name=TMQ41237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526182.1;locus_tag=AO052_01000;product=hypothetical protein;protein_id=TMQ41237.1;transl_table=11
LNKO01000013.1	Genbank	gene	20302	20814	.	-	.	ID=gene-AO052_01005;Name=AO052_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01005
LNKO01000013.1	Protein Homology	CDS	20302	20814	.	-	0	ID=cds-TMQ41238.1;Parent=gene-AO052_01005;Dbxref=NCBI_GP:TMQ41238.1;Name=TMQ41238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551004.1;locus_tag=AO052_01005;product=hypothetical protein;protein_id=TMQ41238.1;transl_table=11
LNKO01000013.1	Genbank	gene	21014	21817	.	+	.	ID=gene-AO052_01010;Name=AO052_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01010
LNKO01000013.1	Protein Homology	CDS	21014	21817	.	+	0	ID=cds-TMQ41239.1;Parent=gene-AO052_01010;Dbxref=NCBI_GP:TMQ41239.1;Name=TMQ41239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631453.1;locus_tag=AO052_01010;product=inositol monophosphatase;protein_id=TMQ41239.1;transl_table=11
LNKO01000013.1	Genbank	gene	21926	23833	.	+	.	ID=gene-AO052_01015;Name=AO052_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01015
LNKO01000013.1	Protein Homology	CDS	21926	23833	.	+	0	ID=cds-TMQ41240.1;Parent=gene-AO052_01015;Dbxref=NCBI_GP:TMQ41240.1;Name=TMQ41240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44944.1;locus_tag=AO052_01015;product=cytochrome C biogenesis protein CcmF;protein_id=TMQ41240.1;transl_table=11
LNKO01000013.1	Genbank	gene	23833	24363	.	+	.	ID=gene-AO052_01020;Name=AO052_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01020
LNKO01000013.1	Protein Homology	CDS	23833	24363	.	+	0	ID=cds-TMQ41241.1;Parent=gene-AO052_01020;Dbxref=NCBI_GP:TMQ41241.1;Name=TMQ41241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526186.1;locus_tag=AO052_01020;product=disulfide bond formation protein DsbE;protein_id=TMQ41241.1;transl_table=11
LNKO01000013.1	Genbank	gene	24360	25517	.	+	.	ID=gene-AO052_01025;Name=AO052_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01025
LNKO01000013.1	Protein Homology	CDS	24360	25517	.	+	0	ID=cds-TMQ41242.1;Parent=gene-AO052_01025;Dbxref=NCBI_GP:TMQ41242.1;Name=TMQ41242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666028.1;locus_tag=AO052_01025;product=nitrite reductase;protein_id=TMQ41242.1;transl_table=11
LNKO01000013.1	Protein Homology	pseudogene	25514	26720	.	+	.	ID=gene-AO052_01030;Name=AO052_01030;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01030;pseudo=true
LNKO01000013.1	Genbank	gene	26841	28151	.	+	.	ID=gene-AO052_01035;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AO052_01035
LNKO01000013.1	Protein Homology	CDS	26841	28151	.	+	0	ID=cds-TMQ41243.1;Parent=gene-AO052_01035;Dbxref=NCBI_GP:TMQ41243.1;Name=TMQ41243.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663563.1;locus_tag=AO052_01035;product=enolase;protein_id=TMQ41243.1;transl_table=11
LNKO01000013.1	Genbank	gene	28235	28654	.	+	.	ID=gene-AO052_01040;Name=AO052_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01040
LNKO01000013.1	Protein Homology	CDS	28235	28654	.	+	0	ID=cds-TMQ41244.1;Parent=gene-AO052_01040;Dbxref=NCBI_GP:TMQ41244.1;Name=TMQ41244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627705.1;locus_tag=AO052_01040;product=hypothetical protein;protein_id=TMQ41244.1;transl_table=11
LNKO01000013.1	Genbank	gene	28667	29248	.	+	.	ID=gene-AO052_01045;Name=AO052_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01045
LNKO01000013.1	Protein Homology	CDS	28667	29248	.	+	0	ID=cds-TMQ41245.1;Parent=gene-AO052_01045;Dbxref=NCBI_GP:TMQ41245.1;Name=TMQ41245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655898.1;locus_tag=AO052_01045;product=hypothetical protein;protein_id=TMQ41245.1;transl_table=11
LNKO01000013.1	Genbank	gene	29249	30430	.	+	.	ID=gene-AO052_01050;Name=AO052_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01050
LNKO01000013.1	Protein Homology	CDS	29249	30430	.	+	0	ID=cds-TMQ41246.1;Parent=gene-AO052_01050;Dbxref=NCBI_GP:TMQ41246.1;Name=TMQ41246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44940.1;locus_tag=AO052_01050;product=hypothetical protein;protein_id=TMQ41246.1;transl_table=11
LNKO01000013.1	Genbank	gene	30662	32188	.	-	.	ID=gene-AO052_01055;Name=AO052_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01055
LNKO01000013.1	Protein Homology	CDS	30662	32188	.	-	0	ID=cds-TMQ41247.1;Parent=gene-AO052_01055;Dbxref=NCBI_GP:TMQ41247.1;Name=TMQ41247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995588.1;locus_tag=AO052_01055;product=catalase;protein_id=TMQ41247.1;transl_table=11
LNKO01000013.1	Genbank	gene	32451	33359	.	+	.	ID=gene-AO052_01060;Name=AO052_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01060
LNKO01000013.1	Protein Homology	CDS	32451	33359	.	+	0	ID=cds-TMQ41248.1;Parent=gene-AO052_01060;Dbxref=NCBI_GP:TMQ41248.1;Name=TMQ41248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDE0.1;locus_tag=AO052_01060;product=glycyl-tRNA synthetase subunit alpha;protein_id=TMQ41248.1;transl_table=11
LNKO01000013.1	Genbank	gene	33418	33678	.	+	.	ID=gene-AO052_01065;Name=AO052_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01065
LNKO01000013.1	Protein Homology	CDS	33418	33678	.	+	0	ID=cds-TMQ41249.1;Parent=gene-AO052_01065;Dbxref=NCBI_GP:TMQ41249.1;Name=TMQ41249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526193.1;locus_tag=AO052_01065;product=hypothetical protein;protein_id=TMQ41249.1;transl_table=11
LNKO01000013.1	Genbank	gene	33708	34073	.	+	.	ID=gene-AO052_01070;Name=AO052_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01070
LNKO01000013.1	Protein Homology	CDS	33708	34073	.	+	0	ID=cds-TMQ41250.1;Parent=gene-AO052_01070;Dbxref=NCBI_GP:TMQ41250.1;Name=TMQ41250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669560.1;locus_tag=AO052_01070;product=hypothetical protein;protein_id=TMQ41250.1;transl_table=11
LNKO01000013.1	Genbank	gene	34411	36477	.	+	.	ID=gene-AO052_01075;Name=AO052_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01075
LNKO01000013.1	Protein Homology	CDS	34411	36477	.	+	0	ID=cds-TMQ41251.1;Parent=gene-AO052_01075;Dbxref=NCBI_GP:TMQ41251.1;Name=TMQ41251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43822.1;locus_tag=AO052_01075;product=glycine--tRNA ligase subunit beta;protein_id=TMQ41251.1;transl_table=11
LNKO01000013.1	Genbank	gene	36563	36639	.	+	.	ID=gene-AO052_01080;Name=AO052_01080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_01080
LNKO01000013.1	tRNAscan-SE	tRNA	36563	36639	.	+	.	ID=rna-AO052_01080;Parent=gene-AO052_01080;anticodon=(pos:36597..36599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01080;product=tRNA-Met
LNKO01000013.1	tRNAscan-SE	exon	36563	36639	.	+	.	ID=exon-AO052_01080-1;Parent=rna-AO052_01080;anticodon=(pos:36597..36599);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01080;product=tRNA-Met
LNKO01000013.1	Genbank	gene	36995	37294	.	+	.	ID=gene-AO052_01085;Name=AO052_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01085
LNKO01000013.1	Protein Homology	CDS	36995	37294	.	+	0	ID=cds-TMQ41252.1;Parent=gene-AO052_01085;Dbxref=NCBI_GP:TMQ41252.1;Name=TMQ41252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526196.1;locus_tag=AO052_01085;product=major capsid protein;protein_id=TMQ41252.1;transl_table=11
LNKO01000013.1	Genbank	gene	37303	37527	.	+	.	ID=gene-AO052_01090;Name=AO052_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01090
LNKO01000013.1	Protein Homology	CDS	37303	37527	.	+	0	ID=cds-TMQ41253.1;Parent=gene-AO052_01090;Dbxref=NCBI_GP:TMQ41253.1;Name=TMQ41253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701942.1;locus_tag=AO052_01090;product=hypothetical protein;protein_id=TMQ41253.1;transl_table=11
LNKO01000013.1	Genbank	gene	37535	37741	.	+	.	ID=gene-AO052_01095;Name=AO052_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01095
LNKO01000013.1	Protein Homology	CDS	37535	37741	.	+	0	ID=cds-TMQ41254.1;Parent=gene-AO052_01095;Dbxref=NCBI_GP:TMQ41254.1;Name=TMQ41254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526198.1;locus_tag=AO052_01095;product=hypothetical protein;protein_id=TMQ41254.1;transl_table=11
LNKO01000013.1	Genbank	gene	37832	38086	.	+	.	ID=gene-AO052_01100;Name=AO052_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01100
LNKO01000013.1	Protein Homology	CDS	37832	38086	.	+	0	ID=cds-TMQ41255.1;Parent=gene-AO052_01100;Dbxref=NCBI_GP:TMQ41255.1;Name=TMQ41255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690588.1;locus_tag=AO052_01100;product=stability protein StbD;protein_id=TMQ41255.1;transl_table=11
LNKO01000013.1	Protein Homology	pseudogene	38076	38365	.	+	.	ID=gene-AO052_01105;Name=AO052_01105;Note=disrupted;description=addiction module toxin RelE;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01105;pseudo=true
LNKO01000013.1	Genbank	gene	38445	38627	.	+	.	ID=gene-AO052_01110;Name=AO052_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01110
LNKO01000013.1	Protein Homology	CDS	38445	38627	.	+	0	ID=cds-TMQ41270.1;Parent=gene-AO052_01110;Dbxref=NCBI_GP:TMQ41270.1;Name=TMQ41270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690584.1;locus_tag=AO052_01110;product=hypothetical protein;protein_id=TMQ41270.1;transl_table=11
LNKO01000013.1	Genbank	gene	39435	40469	.	-	.	ID=gene-AO052_01115;Name=AO052_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01115
LNKO01000013.1	Protein Homology	CDS	39435	40469	.	-	0	ID=cds-TMQ41256.1;Parent=gene-AO052_01115;Dbxref=NCBI_GP:TMQ41256.1;Name=TMQ41256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43747.1;locus_tag=AO052_01115;product=DNA polymerase III subunit delta;protein_id=TMQ41256.1;transl_table=11
LNKO01000013.1	Genbank	gene	40469	40972	.	-	.	ID=gene-AO052_01120;Name=AO052_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01120
LNKO01000013.1	Protein Homology	CDS	40469	40972	.	-	0	ID=cds-TMQ41257.1;Parent=gene-AO052_01120;Dbxref=NCBI_GP:TMQ41257.1;Name=TMQ41257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57457.2;locus_tag=AO052_01120;product=hypothetical protein;protein_id=TMQ41257.1;transl_table=11
LNKO01000013.1	Genbank	gene	41067	43652	.	-	.	ID=gene-AO052_01125;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AO052_01125
LNKO01000013.1	Protein Homology	CDS	41067	43652	.	-	0	ID=cds-TMQ41258.1;Parent=gene-AO052_01125;Dbxref=NCBI_GP:TMQ41258.1;Name=TMQ41258.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLY8.1;locus_tag=AO052_01125;product=leucine--tRNA ligase;protein_id=TMQ41258.1;transl_table=11
LNKO01000013.1	Genbank	gene	43901	44620	.	+	.	ID=gene-AO052_01130;Name=AO052_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01130
LNKO01000013.1	Protein Homology	CDS	43901	44620	.	+	0	ID=cds-TMQ41259.1;Parent=gene-AO052_01130;Dbxref=NCBI_GP:TMQ41259.1;Name=TMQ41259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995578.1;locus_tag=AO052_01130;product=UDP pyrophosphate synthase;protein_id=TMQ41259.1;transl_table=11
LNKO01000013.1	Genbank	gene	44638	45504	.	+	.	ID=gene-AO052_01135;Name=AO052_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01135
LNKO01000013.1	Protein Homology	CDS	44638	45504	.	+	0	ID=cds-TMQ41260.1;Parent=gene-AO052_01135;Dbxref=NCBI_GP:TMQ41260.1;Name=TMQ41260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663617.1;locus_tag=AO052_01135;product=phosphatidate cytidylyltransferase;protein_id=TMQ41260.1;transl_table=11
LNKO01000013.1	Genbank	gene	45514	46845	.	+	.	ID=gene-AO052_01140;Name=AO052_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01140
LNKO01000013.1	Protein Homology	CDS	45514	46845	.	+	0	ID=cds-TMQ41261.1;Parent=gene-AO052_01140;Dbxref=NCBI_GP:TMQ41261.1;Name=TMQ41261.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055296.1;locus_tag=AO052_01140;product=zinc metallopeptidase RseP;protein_id=TMQ41261.1;transl_table=11
LNKO01000013.1	Genbank	gene	46865	49243	.	+	.	ID=gene-AO052_01145;Name=AO052_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01145
LNKO01000013.1	Protein Homology	CDS	46865	49243	.	+	0	ID=cds-TMQ41262.1;Parent=gene-AO052_01145;Dbxref=NCBI_GP:TMQ41262.1;Name=TMQ41262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688399.1;locus_tag=AO052_01145;product=outer membrane protein assembly factor BamA;protein_id=TMQ41262.1;transl_table=11
LNKO01000013.1	Genbank	gene	49354	49947	.	+	.	ID=gene-AO052_01150;Name=AO052_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01150
LNKO01000013.1	Protein Homology	CDS	49354	49947	.	+	0	ID=cds-TMQ41263.1;Parent=gene-AO052_01150;Dbxref=NCBI_GP:TMQ41263.1;Name=TMQ41263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690567.1;locus_tag=AO052_01150;product=hypothetical protein;protein_id=TMQ41263.1;transl_table=11
LNKO01000013.1	Genbank	gene	49960	50985	.	+	.	ID=gene-AO052_01155;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AO052_01155
LNKO01000013.1	Protein Homology	CDS	49960	50985	.	+	0	ID=cds-TMQ41264.1;Parent=gene-AO052_01155;Dbxref=NCBI_GP:TMQ41264.1;Name=TMQ41264.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499730.1;locus_tag=AO052_01155;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=TMQ41264.1;transl_table=11
LNKO01000013.1	Genbank	gene	51163	52014	.	-	.	ID=gene-AO052_01160;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AO052_01160
LNKO01000013.1	Protein Homology	CDS	51163	52014	.	-	0	ID=cds-TMQ41265.1;Parent=gene-AO052_01160;Dbxref=NCBI_GP:TMQ41265.1;Name=TMQ41265.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524524.1;locus_tag=AO052_01160;product=elongation factor Ts;protein_id=TMQ41265.1;transl_table=11
LNKO01000013.1	Genbank	gene	52148	52870	.	-	.	ID=gene-AO052_01165;Name=AO052_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01165
LNKO01000013.1	Protein Homology	CDS	52148	52870	.	-	0	ID=cds-TMQ41266.1;Parent=gene-AO052_01165;Dbxref=NCBI_GP:TMQ41266.1;Name=TMQ41266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44371.4;locus_tag=AO052_01165;product=30S ribosomal protein S2;protein_id=TMQ41266.1;transl_table=11
LNKO01000013.1	Genbank	gene	53048	53812	.	-	.	ID=gene-AO052_01170;Name=AO052_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01170
LNKO01000013.1	Protein Homology	CDS	53048	53812	.	-	0	ID=cds-TMQ41267.1;Parent=gene-AO052_01170;Dbxref=NCBI_GP:TMQ41267.1;Name=TMQ41267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631247.1;locus_tag=AO052_01170;product=hypothetical protein;protein_id=TMQ41267.1;transl_table=11
LNKO01000013.1	Genbank	gene	53913	55769	.	-	.	ID=gene-AO052_01175;Name=AO052_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01175
LNKO01000013.1	Protein Homology	CDS	53913	55769	.	-	0	ID=cds-TMQ41268.1;Parent=gene-AO052_01175;Dbxref=NCBI_GP:TMQ41268.1;Name=TMQ41268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686166.1;locus_tag=AO052_01175;product=potassium transporter;protein_id=TMQ41268.1;transl_table=11
LNKO01000013.1	Genbank	gene	55878	56288	.	-	.	ID=gene-AO052_01180;Name=AO052_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01180
LNKO01000013.1	Protein Homology	CDS	55878	56288	.	-	0	ID=cds-TMQ41269.1;Parent=gene-AO052_01180;Dbxref=NCBI_GP:TMQ41269.1;Name=TMQ41269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648100.1;locus_tag=AO052_01180;product=8-oxo-dGTP diphosphatase;protein_id=TMQ41269.1;transl_table=11
LNKO01000013.1	Genbank	pseudogene	56353	57596	.	-	.	ID=gene-AO052_01185;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;gene_synonym=azi,div;locus_tag=AO052_01185;pseudo=true
LNKO01000013.1	Protein Homology	CDS	56353	57596	.	-	2	ID=cds-AO052_01185;Parent=gene-AO052_01185;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526208.1;locus_tag=AO052_01185;pseudo=true;transl_table=11
##sequence-region LNKO01000014.1 1 21843
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000014.1	Genbank	region	1	21843	.	+	.	ID=LNKO01000014.1:1..21843;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000014.1	Genbank	pseudogene	1	1458	.	-	.	ID=gene-AO052_01190;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;gene_synonym=azi,div;locus_tag=AO052_01190;pseudo=true
LNKO01000014.1	Protein Homology	CDS	1	1458	.	-	0	ID=cds-AO052_01190;Parent=gene-AO052_01190;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526208.1;locus_tag=AO052_01190;pseudo=true;transl_table=11
LNKO01000014.1	Genbank	gene	1583	1885	.	-	.	ID=gene-AO052_01195;Name=AO052_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01195
LNKO01000014.1	Protein Homology	CDS	1583	1885	.	-	0	ID=cds-TMQ41150.1;Parent=gene-AO052_01195;Dbxref=NCBI_GP:TMQ41150.1;Name=TMQ41150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701928.1;locus_tag=AO052_01195;product=hypothetical protein;protein_id=TMQ41150.1;transl_table=11
LNKO01000014.1	Genbank	gene	1965	2279	.	+	.	ID=gene-AO052_01200;Name=AO052_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01200
LNKO01000014.1	Protein Homology	CDS	1965	2279	.	+	0	ID=cds-TMQ41151.1;Parent=gene-AO052_01200;Dbxref=NCBI_GP:TMQ41151.1;Name=TMQ41151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686159.1;locus_tag=AO052_01200;product=hypothetical protein;protein_id=TMQ41151.1;transl_table=11
LNKO01000014.1	Genbank	gene	2307	2828	.	-	.	ID=gene-AO052_01205;Name=AO052_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01205
LNKO01000014.1	Protein Homology	CDS	2307	2828	.	-	0	ID=cds-TMQ41152.1;Parent=gene-AO052_01205;Dbxref=NCBI_GP:TMQ41152.1;Name=TMQ41152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995566.1;locus_tag=AO052_01205;product=tRNA adenosine deaminase;protein_id=TMQ41152.1;transl_table=11
LNKO01000014.1	Genbank	gene	2828	3679	.	-	.	ID=gene-AO052_01210;Name=AO052_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01210
LNKO01000014.1	Protein Homology	CDS	2828	3679	.	-	0	ID=cds-TMQ41153.1;Parent=gene-AO052_01210;Dbxref=NCBI_GP:TMQ41153.1;Name=TMQ41153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758568.1;locus_tag=AO052_01210;product=thymidylate synthase;protein_id=TMQ41153.1;transl_table=11
LNKO01000014.1	Genbank	gene	3689	4495	.	-	.	ID=gene-AO052_01215;Name=AO052_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01215
LNKO01000014.1	Protein Homology	CDS	3689	4495	.	-	0	ID=cds-TMQ41154.1;Parent=gene-AO052_01215;Dbxref=NCBI_GP:TMQ41154.1;Name=TMQ41154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44930.1;locus_tag=AO052_01215;product=prolipoprotein diacylglyceryl transferase;protein_id=TMQ41154.1;transl_table=11
LNKO01000014.1	Genbank	gene	4504	5298	.	-	.	ID=gene-AO052_01220;Name=AO052_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01220
LNKO01000014.1	Protein Homology	CDS	4504	5298	.	-	0	ID=cds-TMQ41155.1;Parent=gene-AO052_01220;Dbxref=NCBI_GP:TMQ41155.1;Name=TMQ41155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648117.1;locus_tag=AO052_01220;product=hypothetical protein;protein_id=TMQ41155.1;transl_table=11
LNKO01000014.1	Genbank	gene	5298	5888	.	-	.	ID=gene-AO052_01225;Name=AO052_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01225
LNKO01000014.1	Protein Homology	CDS	5298	5888	.	-	0	ID=cds-TMQ41156.1;Parent=gene-AO052_01225;Dbxref=NCBI_GP:TMQ41156.1;Name=TMQ41156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57045.2;locus_tag=AO052_01225;product=RNA pyrophosphohydrolase;protein_id=TMQ41156.1;transl_table=11
LNKO01000014.1	Genbank	gene	5969	7075	.	-	.	ID=gene-AO052_01230;Name=AO052_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01230
LNKO01000014.1	Protein Homology	CDS	5969	7075	.	-	0	ID=cds-TMQ41157.1;Parent=gene-AO052_01230;Dbxref=NCBI_GP:TMQ41157.1;Name=TMQ41157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627016.1;locus_tag=AO052_01230;product=glutamate 5-kinase;protein_id=TMQ41157.1;transl_table=11
LNKO01000014.1	Genbank	gene	7176	7658	.	+	.	ID=gene-AO052_01235;Name=AO052_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01235
LNKO01000014.1	Protein Homology	CDS	7176	7658	.	+	0	ID=cds-TMQ41158.1;Parent=gene-AO052_01235;Dbxref=NCBI_GP:TMQ41158.1;Name=TMQ41158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635192.1;locus_tag=AO052_01235;product=dihydrofolate reductase;protein_id=TMQ41158.1;transl_table=11
LNKO01000014.1	Genbank	gene	7831	9003	.	+	.	ID=gene-AO052_01240;Name=AO052_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01240
LNKO01000014.1	Protein Homology	CDS	7831	9003	.	+	0	ID=cds-TMQ41159.1;Parent=gene-AO052_01240;Dbxref=NCBI_GP:TMQ41159.1;Name=TMQ41159.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272273.1;locus_tag=AO052_01240;product=multidrug transporter;protein_id=TMQ41159.1;transl_table=11
LNKO01000014.1	Genbank	gene	9013	10545	.	+	.	ID=gene-AO052_01245;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AO052_01245
LNKO01000014.1	Protein Homology	CDS	9013	10545	.	+	0	ID=cds-TMQ41160.1;Parent=gene-AO052_01245;Dbxref=NCBI_GP:TMQ41160.1;Name=TMQ41160.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272272.1;locus_tag=AO052_01245;product=multidrug resistance protein B;protein_id=TMQ41160.1;transl_table=11
LNKO01000014.1	Genbank	gene	10558	11328	.	-	.	ID=gene-AO052_01250;Name=AO052_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01250
LNKO01000014.1	Protein Homology	CDS	10558	11328	.	-	0	ID=cds-TMQ41161.1;Parent=gene-AO052_01250;Dbxref=NCBI_GP:TMQ41161.1;Name=TMQ41161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686142.1;locus_tag=AO052_01250;product=cell division protein FtsN;protein_id=TMQ41161.1;transl_table=11
LNKO01000014.1	Genbank	gene	11563	14643	.	-	.	ID=gene-AO052_01255;Name=AO052_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01255
LNKO01000014.1	Protein Homology	CDS	11563	14643	.	-	0	ID=cds-TMQ41162.1;Parent=gene-AO052_01255;Dbxref=NCBI_GP:TMQ41162.1;Name=TMQ41162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526218.1;locus_tag=AO052_01255;product=transporter;protein_id=TMQ41162.1;transl_table=11
LNKO01000014.1	Genbank	gene	14661	15857	.	-	.	ID=gene-AO052_01260;Name=AO052_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01260
LNKO01000014.1	Protein Homology	CDS	14661	15857	.	-	0	ID=cds-TMQ41163.1;Parent=gene-AO052_01260;Dbxref=NCBI_GP:TMQ41163.1;Name=TMQ41163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054558.1;locus_tag=AO052_01260;product=hypothetical protein;protein_id=TMQ41163.1;transl_table=11
LNKO01000014.1	Genbank	gene	15888	16451	.	-	.	ID=gene-AO052_01265;Name=AO052_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01265
LNKO01000014.1	Protein Homology	CDS	15888	16451	.	-	0	ID=cds-TMQ41164.1;Parent=gene-AO052_01265;Dbxref=NCBI_GP:TMQ41164.1;Name=TMQ41164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625983.1;locus_tag=AO052_01265;product=TetR family transcriptional regulator;protein_id=TMQ41164.1;transl_table=11
LNKO01000014.1	Genbank	gene	16681	17928	.	-	.	ID=gene-AO052_01270;Name=AO052_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01270
LNKO01000014.1	Protein Homology	CDS	16681	17928	.	-	0	ID=cds-TMQ41165.1;Parent=gene-AO052_01270;Dbxref=NCBI_GP:TMQ41165.1;Name=TMQ41165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690543.1;locus_tag=AO052_01270;product=RNA helicase;protein_id=TMQ41165.1;transl_table=11
LNKO01000014.1	Genbank	gene	18045	18251	.	-	.	ID=gene-AO052_01275;Name=AO052_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01275
LNKO01000014.1	Protein Homology	CDS	18045	18251	.	-	0	ID=cds-TMQ41166.1;Parent=gene-AO052_01275;Dbxref=NCBI_GP:TMQ41166.1;Name=TMQ41166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634195.1;locus_tag=AO052_01275;product=DNA gyrase inhibitor;protein_id=TMQ41166.1;transl_table=11
LNKO01000014.1	Genbank	gene	18244	18864	.	-	.	ID=gene-AO052_01280;Name=AO052_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01280
LNKO01000014.1	Protein Homology	CDS	18244	18864	.	-	0	ID=cds-TMQ41167.1;Parent=gene-AO052_01280;Dbxref=NCBI_GP:TMQ41167.1;Name=TMQ41167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655803.1;locus_tag=AO052_01280;product=dephospho-CoA kinase;protein_id=TMQ41167.1;transl_table=11
LNKO01000014.1	Genbank	gene	18935	20200	.	-	.	ID=gene-AO052_01285;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AO052_01285
LNKO01000014.1	Protein Homology	CDS	18935	20200	.	-	0	ID=cds-TMQ41168.1;Parent=gene-AO052_01285;Dbxref=NCBI_GP:TMQ41168.1;Name=TMQ41168.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631268.1;locus_tag=AO052_01285;product=serine hydroxymethyltransferase;protein_id=TMQ41168.1;transl_table=11
LNKO01000014.1	Genbank	gene	20324	21613	.	-	.	ID=gene-AO052_01290;Name=AO052_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01290
LNKO01000014.1	Protein Homology	CDS	20324	21613	.	-	0	ID=cds-TMQ41169.1;Parent=gene-AO052_01290;Dbxref=NCBI_GP:TMQ41169.1;Name=TMQ41169.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655798.1;locus_tag=AO052_01290;product=phosphoribosylamine--glycine ligase;protein_id=TMQ41169.1;transl_table=11
##sequence-region LNKO01000015.1 1 14453
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000015.1	Genbank	region	1	14453	.	+	.	ID=LNKO01000015.1:1..14453;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000015.1	Genbank	gene	1	1553	.	-	.	ID=gene-AO052_01295;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AO052_01295;partial=true;start_range=.,1
LNKO01000015.1	Protein Homology	CDS	1	1553	.	-	0	ID=cds-TMQ41136.1;Parent=gene-AO052_01295;Dbxref=NCBI_GP:TMQ41136.1;Name=TMQ41136.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526225.1;locus_tag=AO052_01295;partial=true;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=TMQ41136.1;start_range=.,1;transl_table=11
LNKO01000015.1	Genbank	gene	1741	2145	.	-	.	ID=gene-AO052_01300;Name=AO052_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01300
LNKO01000015.1	Protein Homology	CDS	1741	2145	.	-	0	ID=cds-TMQ41137.1;Parent=gene-AO052_01300;Dbxref=NCBI_GP:TMQ41137.1;Name=TMQ41137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631262.1;locus_tag=AO052_01300;product=hypothetical protein;protein_id=TMQ41137.1;transl_table=11
LNKO01000015.1	Genbank	gene	2260	3999	.	-	.	ID=gene-AO052_01305;Name=AO052_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01305
LNKO01000015.1	Protein Homology	CDS	2260	3999	.	-	0	ID=cds-TMQ41138.1;Parent=gene-AO052_01305;Dbxref=NCBI_GP:TMQ41138.1;Name=TMQ41138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526227.1;locus_tag=AO052_01305;product=thiol:disulfide interchange protein;protein_id=TMQ41138.1;transl_table=11
LNKO01000015.1	Genbank	gene	4191	4901	.	+	.	ID=gene-AO052_01310;Name=AO052_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01310
LNKO01000015.1	Protein Homology	CDS	4191	4901	.	+	0	ID=cds-TMQ41139.1;Parent=gene-AO052_01310;Dbxref=NCBI_GP:TMQ41139.1;Name=TMQ41139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690537.1;locus_tag=AO052_01310;product=two-component system response regulator;protein_id=TMQ41139.1;transl_table=11
LNKO01000015.1	Genbank	gene	5300	6670	.	+	.	ID=gene-AO052_01315;Name=AO052_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01315
LNKO01000015.1	Protein Homology	CDS	5300	6670	.	+	0	ID=cds-TMQ41140.1;Parent=gene-AO052_01315;Dbxref=NCBI_GP:TMQ41140.1;Name=TMQ41140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054564.1;locus_tag=AO052_01315;product=sodium:alanine symporter;protein_id=TMQ41140.1;transl_table=11
LNKO01000015.1	Genbank	gene	6729	7466	.	-	.	ID=gene-AO052_01320;Name=AO052_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01320
LNKO01000015.1	Protein Homology	CDS	6729	7466	.	-	0	ID=cds-TMQ41141.1;Parent=gene-AO052_01320;Dbxref=NCBI_GP:TMQ41141.1;Name=TMQ41141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659068.1;locus_tag=AO052_01320;product=hypothetical protein;protein_id=TMQ41141.1;transl_table=11
LNKO01000015.1	Genbank	gene	7516	8505	.	-	.	ID=gene-AO052_01325;Name=AO052_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01325
LNKO01000015.1	Protein Homology	CDS	7516	8505	.	-	0	ID=cds-TMQ41142.1;Parent=gene-AO052_01325;Dbxref=NCBI_GP:TMQ41142.1;Name=TMQ41142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44916.1;locus_tag=AO052_01325;product=octaprenyl diphosphate synthase;protein_id=TMQ41142.1;transl_table=11
LNKO01000015.1	Genbank	gene	8720	9031	.	+	.	ID=gene-AO052_01330;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AO052_01330
LNKO01000015.1	Protein Homology	CDS	8720	9031	.	+	0	ID=cds-TMQ41143.1;Parent=gene-AO052_01330;Dbxref=NCBI_GP:TMQ41143.1;Name=TMQ41143.1;gbkey=CDS;gene=rplU;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N3T7.1;locus_tag=AO052_01330;product=50S ribosomal protein L21;protein_id=TMQ41143.1;transl_table=11
LNKO01000015.1	Genbank	gene	9052	9309	.	+	.	ID=gene-AO052_01335;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AO052_01335
LNKO01000015.1	Protein Homology	CDS	9052	9309	.	+	0	ID=cds-TMQ41144.1;Parent=gene-AO052_01335;Dbxref=NCBI_GP:TMQ41144.1;Name=TMQ41144.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559148.1;locus_tag=AO052_01335;product=50S ribosomal protein L27;protein_id=TMQ41144.1;transl_table=11
LNKO01000015.1	Genbank	gene	9390	10310	.	+	.	ID=gene-AO052_01340;Name=AO052_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01340
LNKO01000015.1	Protein Homology	CDS	9390	10310	.	+	0	ID=cds-TMQ41145.1;Parent=gene-AO052_01340;Dbxref=NCBI_GP:TMQ41145.1;Name=TMQ41145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526232.1;locus_tag=AO052_01340;product=transporter;protein_id=TMQ41145.1;transl_table=11
LNKO01000015.1	Genbank	gene	10338	11588	.	+	.	ID=gene-AO052_01345;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=AO052_01345
LNKO01000015.1	Protein Homology	CDS	10338	11588	.	+	0	ID=cds-TMQ41146.1;Parent=gene-AO052_01345;Dbxref=NCBI_GP:TMQ41146.1;Name=TMQ41146.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689138.1;locus_tag=AO052_01345;product=GTPase Obg;protein_id=TMQ41146.1;transl_table=11
LNKO01000015.1	Genbank	gene	11658	12080	.	-	.	ID=gene-AO052_01350;Name=AO052_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01350
LNKO01000015.1	Protein Homology	CDS	11658	12080	.	-	0	ID=cds-TMQ41147.1;Parent=gene-AO052_01350;Dbxref=NCBI_GP:TMQ41147.1;Name=TMQ41147.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686088.1;locus_tag=AO052_01350;product=nucleoside diphosphate kinase;protein_id=TMQ41147.1;transl_table=11
LNKO01000015.1	Genbank	gene	12090	13394	.	-	.	ID=gene-AO052_01355;Name=AO052_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01355
LNKO01000015.1	Protein Homology	CDS	12090	13394	.	-	0	ID=cds-TMQ41148.1;Parent=gene-AO052_01355;Dbxref=NCBI_GP:TMQ41148.1;Name=TMQ41148.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655773.1;locus_tag=AO052_01355;product=aminopeptidase;protein_id=TMQ41148.1;transl_table=11
LNKO01000015.1	Genbank	gene	13473	14453	.	-	.	ID=gene-AO052_01360;Name=AO052_01360;end_range=14453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01360;partial=true
LNKO01000015.1	Protein Homology	CDS	13473	14453	.	-	0	ID=cds-TMQ41149.1;Parent=gene-AO052_01360;Dbxref=NCBI_GP:TMQ41149.1;Name=TMQ41149.1;end_range=14453,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526235.1;locus_tag=AO052_01360;partial=true;product=dTDP-glucose 4%2C6-dehydratase;protein_id=TMQ41149.1;transl_table=11
##sequence-region LNKO01000016.1 1 12214
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000016.1	Genbank	region	1	12214	.	+	.	ID=LNKO01000016.1:1..12214;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000016.1	Genbank	gene	150	1568	.	-	.	ID=gene-AO052_01365;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AO052_01365
LNKO01000016.1	Protein Homology	CDS	150	1568	.	-	0	ID=cds-TMQ41128.1;Parent=gene-AO052_01365;Dbxref=NCBI_GP:TMQ41128.1;Name=TMQ41128.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701902.1;locus_tag=AO052_01365;product=glutamine synthetase;protein_id=TMQ41128.1;transl_table=11
LNKO01000016.1	Genbank	gene	1800	3650	.	+	.	ID=gene-AO052_01370;Name=AO052_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01370
LNKO01000016.1	Protein Homology	CDS	1800	3650	.	+	0	ID=cds-TMQ41129.1;Parent=gene-AO052_01370;Dbxref=NCBI_GP:TMQ41129.1;Name=TMQ41129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648234.1;locus_tag=AO052_01370;product=GTP-binding protein TypA;protein_id=TMQ41129.1;transl_table=11
LNKO01000016.1	Genbank	gene	3738	4370	.	-	.	ID=gene-AO052_01375;Name=AO052_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01375
LNKO01000016.1	Protein Homology	CDS	3738	4370	.	-	0	ID=cds-TMQ41130.1;Parent=gene-AO052_01375;Dbxref=NCBI_GP:TMQ41130.1;Name=TMQ41130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055267.1;locus_tag=AO052_01375;product=pyridoxamine 5'-phosphate oxidase;protein_id=TMQ41130.1;transl_table=11
LNKO01000016.1	Genbank	gene	4563	5270	.	+	.	ID=gene-AO052_01380;Name=AO052_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01380
LNKO01000016.1	Protein Homology	CDS	4563	5270	.	+	0	ID=cds-TMQ41131.1;Parent=gene-AO052_01380;Dbxref=NCBI_GP:TMQ41131.1;Name=TMQ41131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701899.1;locus_tag=AO052_01380;product=hypothetical protein;protein_id=TMQ41131.1;transl_table=11
LNKO01000016.1	Genbank	gene	5352	5768	.	-	.	ID=gene-AO052_01385;Name=AO052_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01385
LNKO01000016.1	Protein Homology	CDS	5352	5768	.	-	0	ID=cds-TMQ41135.1;Parent=gene-AO052_01385;Dbxref=NCBI_GP:TMQ41135.1;Name=TMQ41135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663733.1;locus_tag=AO052_01385;product=hypothetical protein;protein_id=TMQ41135.1;transl_table=11
LNKO01000016.1	Genbank	gene	7008	7289	.	-	.	ID=gene-AO052_01390;Name=AO052_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01390
LNKO01000016.1	Protein Homology	CDS	7008	7289	.	-	0	ID=cds-TMQ41132.1;Parent=gene-AO052_01390;Dbxref=NCBI_GP:TMQ41132.1;Name=TMQ41132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526240.1;locus_tag=AO052_01390;product=virulence factor;protein_id=TMQ41132.1;transl_table=11
LNKO01000016.1	Genbank	gene	7485	9833	.	+	.	ID=gene-AO052_01395;Name=AO052_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01395
LNKO01000016.1	Protein Homology	CDS	7485	9833	.	+	0	ID=cds-TMQ41133.1;Parent=gene-AO052_01395;Dbxref=NCBI_GP:TMQ41133.1;Name=TMQ41133.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055265.1;locus_tag=AO052_01395;product=exoribonuclease R;protein_id=TMQ41133.1;transl_table=11
LNKO01000016.1	Genbank	gene	9889	10629	.	+	.	ID=gene-AO052_01400;Name=AO052_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01400
LNKO01000016.1	Protein Homology	CDS	9889	10629	.	+	0	ID=cds-TMQ41134.1;Parent=gene-AO052_01400;Dbxref=NCBI_GP:TMQ41134.1;Name=TMQ41134.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690506.1;locus_tag=AO052_01400;product=23S rRNA methyltransferase;protein_id=TMQ41134.1;transl_table=11
LNKO01000016.1	Genbank	pseudogene	10666	12214	.	-	.	ID=gene-AO052_01405;Name=AO052_01405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01405;pseudo=true
LNKO01000016.1	Protein Homology	CDS	10666	12214	.	-	1	ID=cds-AO052_01405;Parent=gene-AO052_01405;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701896.1;locus_tag=AO052_01405;pseudo=true;transl_table=11
##sequence-region LNKO01000017.1 1 2041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000017.1	Genbank	region	1	2041	.	+	.	ID=LNKO01000017.1:1..2041;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000017.1	Genbank	pseudogene	1	1021	.	-	.	ID=gene-AO052_01410;Name=AO052_01410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01410;pseudo=true
LNKO01000017.1	Protein Homology	CDS	1	1021	.	-	0	ID=cds-AO052_01410;Parent=gene-AO052_01410;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701896.1;locus_tag=AO052_01410;pseudo=true;transl_table=11
LNKO01000017.1	Genbank	gene	1149	1712	.	-	.	ID=gene-AO052_01415;Name=AO052_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01415
LNKO01000017.1	Protein Homology	CDS	1149	1712	.	-	0	ID=cds-TMQ41127.1;Parent=gene-AO052_01415;Dbxref=NCBI_GP:TMQ41127.1;Name=TMQ41127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500940.1;locus_tag=AO052_01415;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=TMQ41127.1;transl_table=11
##sequence-region LNKO01000018.1 1 29855
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000018.1	Genbank	region	1	29855	.	+	.	ID=LNKO01000018.1:1..29855;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000018.1	Genbank	gene	1	282	.	-	.	ID=gene-AO052_01420;Name=AO052_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01420;partial=true;start_range=.,1
LNKO01000018.1	Protein Homology	CDS	1	282	.	-	0	ID=cds-TMQ41094.1;Parent=gene-AO052_01420;Dbxref=NCBI_GP:TMQ41094.1;Name=TMQ41094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526244.1;locus_tag=AO052_01420;partial=true;product=cell division protein ZapA;protein_id=TMQ41094.1;start_range=.,1;transl_table=11
LNKO01000018.1	Genbank	gene	431	3238	.	+	.	ID=gene-AO052_01425;Name=AO052_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01425
LNKO01000018.1	Protein Homology	CDS	431	3238	.	+	0	ID=cds-TMQ41095.1;Parent=gene-AO052_01425;Dbxref=NCBI_GP:TMQ41095.1;Name=TMQ41095.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526245.1;locus_tag=AO052_01425;product=DNA polymerase I;protein_id=TMQ41095.1;transl_table=11
LNKO01000018.1	Genbank	gene	3264	3611	.	+	.	ID=gene-AO052_01430;Name=AO052_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01430
LNKO01000018.1	Protein Homology	CDS	3264	3611	.	+	0	ID=cds-TMQ41096.1;Parent=gene-AO052_01430;Dbxref=NCBI_GP:TMQ41096.1;Name=TMQ41096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44904.1;locus_tag=AO052_01430;product=hypothetical protein;protein_id=TMQ41096.1;transl_table=11
LNKO01000018.1	Genbank	gene	3748	4509	.	-	.	ID=gene-AO052_01435;Name=AO052_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01435
LNKO01000018.1	Protein Homology	CDS	3748	4509	.	-	0	ID=cds-TMQ41097.1;Parent=gene-AO052_01435;Dbxref=NCBI_GP:TMQ41097.1;Name=TMQ41097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652481.1;locus_tag=AO052_01435;product=HugZ family heme oxygenase;protein_id=TMQ41097.1;transl_table=11
LNKO01000018.1	Genbank	gene	4685	6328	.	-	.	ID=gene-AO052_01440;Name=AO052_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01440
LNKO01000018.1	Protein Homology	CDS	4685	6328	.	-	0	ID=cds-TMQ41098.1;Parent=gene-AO052_01440;Dbxref=NCBI_GP:TMQ41098.1;Name=TMQ41098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652480.1;locus_tag=AO052_01440;product=peptide transporter;protein_id=TMQ41098.1;transl_table=11
LNKO01000018.1	Genbank	gene	6475	7866	.	-	.	ID=gene-AO052_01445;Name=AO052_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01445
LNKO01000018.1	Protein Homology	CDS	6475	7866	.	-	0	ID=cds-TMQ41099.1;Parent=gene-AO052_01445;Dbxref=NCBI_GP:TMQ41099.1;Name=TMQ41099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690476.1;locus_tag=AO052_01445;product=MFS transporter;protein_id=TMQ41099.1;transl_table=11
LNKO01000018.1	Genbank	gene	7863	8378	.	-	.	ID=gene-AO052_01450;Name=AO052_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01450
LNKO01000018.1	Protein Homology	CDS	7863	8378	.	-	0	ID=cds-TMQ41100.1;Parent=gene-AO052_01450;Dbxref=NCBI_GP:TMQ41100.1;Name=TMQ41100.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701890.1;locus_tag=AO052_01450;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=TMQ41100.1;transl_table=11
LNKO01000018.1	Genbank	gene	8801	9235	.	-	.	ID=gene-AO052_01455;Name=AO052_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01455
LNKO01000018.1	Protein Homology	CDS	8801	9235	.	-	0	ID=cds-TMQ41101.1;Parent=gene-AO052_01455;Dbxref=NCBI_GP:TMQ41101.1;Name=TMQ41101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701889.1;locus_tag=AO052_01455;product=hypothetical protein;protein_id=TMQ41101.1;transl_table=11
LNKO01000018.1	Genbank	gene	9229	10002	.	-	.	ID=gene-AO052_01460;Name=AO052_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01460
LNKO01000018.1	Protein Homology	CDS	9229	10002	.	-	0	ID=cds-TMQ41102.1;Parent=gene-AO052_01460;Dbxref=NCBI_GP:TMQ41102.1;Name=TMQ41102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648299.1;locus_tag=AO052_01460;product=DNA polymerase I;protein_id=TMQ41102.1;transl_table=11
LNKO01000018.1	Genbank	gene	9984	11075	.	-	.	ID=gene-AO052_01465;Name=AO052_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01465
LNKO01000018.1	Protein Homology	CDS	9984	11075	.	-	0	ID=cds-TMQ41103.1;Parent=gene-AO052_01465;Dbxref=NCBI_GP:TMQ41103.1;Name=TMQ41103.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701887.1;locus_tag=AO052_01465;product=tRNA (uracil-5-)-methyltransferase;protein_id=TMQ41103.1;transl_table=11
LNKO01000018.1	Genbank	gene	11219	11554	.	-	.	ID=gene-AO052_01470;Name=AO052_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01470
LNKO01000018.1	Protein Homology	CDS	11219	11554	.	-	0	ID=cds-TMQ41104.1;Parent=gene-AO052_01470;Dbxref=NCBI_GP:TMQ41104.1;Name=TMQ41104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701886.1;locus_tag=AO052_01470;product=hypothetical protein;protein_id=TMQ41104.1;transl_table=11
LNKO01000018.1	Genbank	gene	11616	12233	.	-	.	ID=gene-AO052_01475;Name=AO052_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01475
LNKO01000018.1	Protein Homology	CDS	11616	12233	.	-	0	ID=cds-TMQ41105.1;Parent=gene-AO052_01475;Dbxref=NCBI_GP:TMQ41105.1;Name=TMQ41105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652464.1;locus_tag=AO052_01475;product=thiol:disulfide interchange protein;protein_id=TMQ41105.1;transl_table=11
LNKO01000018.1	Genbank	gene	12246	12512	.	-	.	ID=gene-AO052_01480;Name=AO052_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01480
LNKO01000018.1	Protein Homology	CDS	12246	12512	.	-	0	ID=cds-TMQ41106.1;Parent=gene-AO052_01480;Dbxref=NCBI_GP:TMQ41106.1;Name=TMQ41106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631120.1;locus_tag=AO052_01480;product=hypothetical protein;protein_id=TMQ41106.1;transl_table=11
LNKO01000018.1	Genbank	gene	12577	13155	.	+	.	ID=gene-AO052_01485;Name=AO052_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01485
LNKO01000018.1	Protein Homology	CDS	12577	13155	.	+	0	ID=cds-TMQ41107.1;Parent=gene-AO052_01485;Dbxref=NCBI_GP:TMQ41107.1;Name=TMQ41107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652462.1;locus_tag=AO052_01485;product=molybdenum cofactor guanylyltransferase;protein_id=TMQ41107.1;transl_table=11
LNKO01000018.1	Genbank	gene	13294	14286	.	-	.	ID=gene-AO052_01490;Name=AO052_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01490
LNKO01000018.1	Protein Homology	CDS	13294	14286	.	-	0	ID=cds-TMQ41108.1;Parent=gene-AO052_01490;Dbxref=NCBI_GP:TMQ41108.1;Name=TMQ41108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648312.1;locus_tag=AO052_01490;product=hypothetical protein;protein_id=TMQ41108.1;transl_table=11
LNKO01000018.1	Genbank	gene	14484	16241	.	-	.	ID=gene-AO052_01495;Name=AO052_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01495
LNKO01000018.1	Protein Homology	CDS	14484	16241	.	-	0	ID=cds-TMQ41109.1;Parent=gene-AO052_01495;Dbxref=NCBI_GP:TMQ41109.1;Name=TMQ41109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701883.1;locus_tag=AO052_01495;product=hypothetical protein;protein_id=TMQ41109.1;transl_table=11
LNKO01000018.1	Genbank	gene	16243	16461	.	-	.	ID=gene-AO052_01500;Name=AO052_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01500
LNKO01000018.1	Protein Homology	CDS	16243	16461	.	-	0	ID=cds-TMQ41110.1;Parent=gene-AO052_01500;Dbxref=NCBI_GP:TMQ41110.1;Name=TMQ41110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM60.1;locus_tag=AO052_01500;product=hypothetical protein;protein_id=TMQ41110.1;transl_table=11
LNKO01000018.1	Genbank	gene	16587	17603	.	+	.	ID=gene-AO052_01505;Name=AO052_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01505
LNKO01000018.1	Protein Homology	CDS	16587	17603	.	+	0	ID=cds-TMQ41111.1;Parent=gene-AO052_01505;Dbxref=NCBI_GP:TMQ41111.1;Name=TMQ41111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551050.1;locus_tag=AO052_01505;product=nucleoid-associated protein NdpA;protein_id=TMQ41111.1;transl_table=11
LNKO01000018.1	Genbank	gene	17669	18082	.	+	.	ID=gene-AO052_01510;Name=AO052_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01510
LNKO01000018.1	Protein Homology	CDS	17669	18082	.	+	0	ID=cds-TMQ41112.1;Parent=gene-AO052_01510;Dbxref=NCBI_GP:TMQ41112.1;Name=TMQ41112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648317.1;locus_tag=AO052_01510;product=cell envelope protein SmpA;protein_id=TMQ41112.1;transl_table=11
LNKO01000018.1	Genbank	gene	18136	18819	.	+	.	ID=gene-AO052_01515;Name=AO052_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01515
LNKO01000018.1	Protein Homology	CDS	18136	18819	.	+	0	ID=cds-TMQ41113.1;Parent=gene-AO052_01515;Dbxref=NCBI_GP:TMQ41113.1;Name=TMQ41113.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272237.1;locus_tag=AO052_01515;product=two-component system response regulator;protein_id=TMQ41113.1;transl_table=11
LNKO01000018.1	Genbank	gene	19084	20055	.	-	.	ID=gene-AO052_01520;Name=AO052_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01520
LNKO01000018.1	Protein Homology	CDS	19084	20055	.	-	0	ID=cds-TMQ41114.1;Parent=gene-AO052_01520;Dbxref=NCBI_GP:TMQ41114.1;Name=TMQ41114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526260.1;locus_tag=AO052_01520;product=elongation factor P--(R)-beta-lysine ligase;protein_id=TMQ41114.1;transl_table=11
LNKO01000018.1	Genbank	gene	20266	22065	.	+	.	ID=gene-AO052_01525;Name=AO052_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01525
LNKO01000018.1	Protein Homology	CDS	20266	22065	.	+	0	ID=cds-TMQ41115.1;Parent=gene-AO052_01525;Dbxref=NCBI_GP:TMQ41115.1;Name=TMQ41115.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655655.1;locus_tag=AO052_01525;product=fumarate reductase;protein_id=TMQ41115.1;transl_table=11
LNKO01000018.1	Genbank	gene	22058	22828	.	+	.	ID=gene-AO052_01530;Name=AO052_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01530
LNKO01000018.1	Protein Homology	CDS	22058	22828	.	+	0	ID=cds-TMQ41116.1;Parent=gene-AO052_01530;Dbxref=NCBI_GP:TMQ41116.1;Name=TMQ41116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44893.1;locus_tag=AO052_01530;product=fumarate reductase;protein_id=TMQ41116.1;transl_table=11
LNKO01000018.1	Genbank	gene	22839	23249	.	+	.	ID=gene-AO052_01535;Name=AO052_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01535
LNKO01000018.1	Protein Homology	CDS	22839	23249	.	+	0	ID=cds-TMQ41117.1;Parent=gene-AO052_01535;Dbxref=NCBI_GP:TMQ41117.1;Name=TMQ41117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701880.1;locus_tag=AO052_01535;product=fumarate reductase;protein_id=TMQ41117.1;transl_table=11
LNKO01000018.1	Genbank	gene	23262	23606	.	+	.	ID=gene-AO052_01540;Name=AO052_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01540
LNKO01000018.1	Protein Homology	CDS	23262	23606	.	+	0	ID=cds-TMQ41118.1;Parent=gene-AO052_01540;Dbxref=NCBI_GP:TMQ41118.1;Name=TMQ41118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44891.1;locus_tag=AO052_01540;product=fumarate reductase;protein_id=TMQ41118.1;transl_table=11
LNKO01000018.1	Genbank	gene	23712	24452	.	-	.	ID=gene-AO052_01545;Name=AO052_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01545
LNKO01000018.1	Protein Homology	CDS	23712	24452	.	-	0	ID=cds-TMQ41119.1;Parent=gene-AO052_01545;Dbxref=NCBI_GP:TMQ41119.1;Name=TMQ41119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551053.1;locus_tag=AO052_01545;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=TMQ41119.1;transl_table=11
LNKO01000018.1	Genbank	gene	24439	24744	.	-	.	ID=gene-AO052_01550;Name=AO052_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01550
LNKO01000018.1	Protein Homology	CDS	24439	24744	.	-	0	ID=cds-TMQ41120.1;Parent=gene-AO052_01550;Dbxref=NCBI_GP:TMQ41120.1;Name=TMQ41120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663067.1;locus_tag=AO052_01550;product=transcriptional regulator;protein_id=TMQ41120.1;transl_table=11
LNKO01000018.1	Genbank	gene	24782	26563	.	-	.	ID=gene-AO052_01555;Name=AO052_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01555
LNKO01000018.1	Protein Homology	CDS	24782	26563	.	-	0	ID=cds-TMQ41121.1;Parent=gene-AO052_01555;Dbxref=NCBI_GP:TMQ41121.1;Name=TMQ41121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44888.1;locus_tag=AO052_01555;product=lytic murein transglycosylase;protein_id=TMQ41121.1;transl_table=11
LNKO01000018.1	Genbank	gene	26579	26875	.	-	.	ID=gene-AO052_01560;Name=AO052_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01560
LNKO01000018.1	Protein Homology	CDS	26579	26875	.	-	0	ID=cds-TMQ41122.1;Parent=gene-AO052_01560;Dbxref=NCBI_GP:TMQ41122.1;Name=TMQ41122.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636808.1;locus_tag=AO052_01560;product=hypothetical protein;protein_id=TMQ41122.1;transl_table=11
LNKO01000018.1	Genbank	gene	26892	27368	.	-	.	ID=gene-AO052_01565;Name=AO052_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01565
LNKO01000018.1	Protein Homology	CDS	26892	27368	.	-	0	ID=cds-TMQ41123.1;Parent=gene-AO052_01565;Dbxref=NCBI_GP:TMQ41123.1;Name=TMQ41123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526267.1;locus_tag=AO052_01565;product=acyl-CoA thioesterase;protein_id=TMQ41123.1;transl_table=11
LNKO01000018.1	Genbank	gene	27368	27925	.	-	.	ID=gene-AO052_01570;Name=AO052_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01570
LNKO01000018.1	Protein Homology	CDS	27368	27925	.	-	0	ID=cds-TMQ41124.1;Parent=gene-AO052_01570;Dbxref=NCBI_GP:TMQ41124.1;Name=TMQ41124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690438.1;locus_tag=AO052_01570;product=septation protein A;protein_id=TMQ41124.1;transl_table=11
LNKO01000018.1	Genbank	gene	27931	28665	.	-	.	ID=gene-AO052_01575;Name=AO052_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01575
LNKO01000018.1	Protein Homology	CDS	27931	28665	.	-	0	ID=cds-TMQ41125.1;Parent=gene-AO052_01575;Dbxref=NCBI_GP:TMQ41125.1;Name=TMQ41125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551056.1;locus_tag=AO052_01575;product=hypothetical protein;protein_id=TMQ41125.1;transl_table=11
LNKO01000018.1	Genbank	gene	28811	29821	.	-	.	ID=gene-AO052_01580;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AO052_01580
LNKO01000018.1	Protein Homology	CDS	28811	29821	.	-	0	ID=cds-TMQ41126.1;Parent=gene-AO052_01580;Dbxref=NCBI_GP:TMQ41126.1;Name=TMQ41126.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648354.1;locus_tag=AO052_01580;product=beta-methylgalactoside transporter permease;protein_id=TMQ41126.1;transl_table=11
##sequence-region LNKO01000019.1 1 24536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000019.1	Genbank	region	1	24536	.	+	.	ID=LNKO01000019.1:1..24536;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000019.1	Genbank	gene	1	1503	.	-	.	ID=gene-AO052_01585;Name=AO052_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01585;partial=true;start_range=.,1
LNKO01000019.1	Protein Homology	CDS	1	1503	.	-	0	ID=cds-TMQ41072.1;Parent=gene-AO052_01585;Dbxref=NCBI_GP:TMQ41072.1;Name=TMQ41072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689088.1;locus_tag=AO052_01585;partial=true;product=sugar ABC transporter ATP-binding protein;protein_id=TMQ41072.1;start_range=.,1;transl_table=11
LNKO01000019.1	Genbank	gene	1569	2564	.	-	.	ID=gene-AO052_01590;Name=AO052_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01590
LNKO01000019.1	Protein Homology	CDS	1569	2564	.	-	0	ID=cds-TMQ41073.1;Parent=gene-AO052_01590;Dbxref=NCBI_GP:TMQ41073.1;Name=TMQ41073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701875.1;locus_tag=AO052_01590;product=sugar ABC transporter substrate-binding protein;protein_id=TMQ41073.1;transl_table=11
LNKO01000019.1	Genbank	gene	2709	3707	.	-	.	ID=gene-AO052_01595;Name=AO052_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01595
LNKO01000019.1	Protein Homology	CDS	2709	3707	.	-	0	ID=cds-TMQ41074.1;Parent=gene-AO052_01595;Dbxref=NCBI_GP:TMQ41074.1;Name=TMQ41074.1;Note=controls transcription of galETKM;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690429.1;locus_tag=AO052_01595;product=transcriptional regulator;protein_id=TMQ41074.1;transl_table=11
LNKO01000019.1	Genbank	gene	3915	4964	.	+	.	ID=gene-AO052_01600;Name=AO052_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01600
LNKO01000019.1	Protein Homology	CDS	3915	4964	.	+	0	ID=cds-TMQ41075.1;Parent=gene-AO052_01600;Dbxref=NCBI_GP:TMQ41075.1;Name=TMQ41075.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690427.1;locus_tag=AO052_01600;product=galactose-1-phosphate uridylyltransferase;protein_id=TMQ41075.1;transl_table=11
LNKO01000019.1	Genbank	gene	5041	6195	.	+	.	ID=gene-AO052_01605;Name=AO052_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01605
LNKO01000019.1	Protein Homology	CDS	5041	6195	.	+	0	ID=cds-TMQ41076.1;Parent=gene-AO052_01605;Dbxref=NCBI_GP:TMQ41076.1;Name=TMQ41076.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDQ5.1;locus_tag=AO052_01605;product=galactokinase;protein_id=TMQ41076.1;transl_table=11
LNKO01000019.1	Genbank	gene	6205	7227	.	+	.	ID=gene-AO052_01610;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AO052_01610
LNKO01000019.1	Protein Homology	CDS	6205	7227	.	+	0	ID=cds-TMQ41077.1;Parent=gene-AO052_01610;Dbxref=NCBI_GP:TMQ41077.1;Name=TMQ41077.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272228.1;locus_tag=AO052_01610;product=galactose mutarotase;protein_id=TMQ41077.1;transl_table=11
LNKO01000019.1	Genbank	gene	7398	7946	.	+	.	ID=gene-AO052_01615;Name=AO052_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01615
LNKO01000019.1	Protein Homology	CDS	7398	7946	.	+	0	ID=cds-TMQ41078.1;Parent=gene-AO052_01615;Dbxref=NCBI_GP:TMQ41078.1;Name=TMQ41078.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636269.1;locus_tag=AO052_01615;product=hypothetical protein;protein_id=TMQ41078.1;transl_table=11
LNKO01000019.1	Genbank	gene	7958	9250	.	+	.	ID=gene-AO052_01620;Name=AO052_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01620
LNKO01000019.1	Protein Homology	CDS	7958	9250	.	+	0	ID=cds-TMQ41079.1;Parent=gene-AO052_01620;Dbxref=NCBI_GP:TMQ41079.1;Name=TMQ41079.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44881.1;locus_tag=AO052_01620;product=Xaa-Pro aminopeptidase;protein_id=TMQ41079.1;transl_table=11
LNKO01000019.1	Genbank	gene	9352	9777	.	+	.	ID=gene-AO052_01625;Name=AO052_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01625
LNKO01000019.1	Protein Homology	CDS	9352	9777	.	+	0	ID=cds-TMQ41080.1;Parent=gene-AO052_01625;Dbxref=NCBI_GP:TMQ41080.1;Name=TMQ41080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696761.1;locus_tag=AO052_01625;product=universal stress protein;protein_id=TMQ41080.1;transl_table=11
LNKO01000019.1	Genbank	gene	9964	12588	.	+	.	ID=gene-AO052_01630;Name=AO052_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01630
LNKO01000019.1	Protein Homology	CDS	9964	12588	.	+	0	ID=cds-TMQ41081.1;Parent=gene-AO052_01630;Dbxref=NCBI_GP:TMQ41081.1;Name=TMQ41081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652410.1;locus_tag=AO052_01630;product=alanine--tRNA ligase;protein_id=TMQ41081.1;transl_table=11
LNKO01000019.1	Genbank	gene	12666	12857	.	+	.	ID=gene-AO052_01635;Name=AO052_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01635
LNKO01000019.1	Protein Homology	CDS	12666	12857	.	+	0	ID=cds-TMQ41082.1;Parent=gene-AO052_01635;Dbxref=NCBI_GP:TMQ41082.1;Name=TMQ41082.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDR1.1;locus_tag=AO052_01635;product=carbon storage regulator;protein_id=TMQ41082.1;transl_table=11
LNKO01000019.1	Genbank	gene	12879	13766	.	+	.	ID=gene-AO052_01640;Name=AO052_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01640
LNKO01000019.1	Protein Homology	CDS	12879	13766	.	+	0	ID=cds-TMQ41083.1;Parent=gene-AO052_01640;Dbxref=NCBI_GP:TMQ41083.1;Name=TMQ41083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701865.1;locus_tag=AO052_01640;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=TMQ41083.1;transl_table=11
LNKO01000019.1	Genbank	gene	13901	15274	.	+	.	ID=gene-AO052_01645;Name=AO052_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01645
LNKO01000019.1	Protein Homology	CDS	13901	15274	.	+	0	ID=cds-TMQ41084.1;Parent=gene-AO052_01645;Dbxref=NCBI_GP:TMQ41084.1;Name=TMQ41084.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652406.1;locus_tag=AO052_01645;product=argininosuccinate lyase;protein_id=TMQ41084.1;transl_table=11
LNKO01000019.1	Genbank	gene	15418	16299	.	+	.	ID=gene-AO052_01650;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AO052_01650
LNKO01000019.1	Protein Homology	CDS	15418	16299	.	+	0	ID=cds-TMQ41085.1;Parent=gene-AO052_01650;Dbxref=NCBI_GP:TMQ41085.1;Name=TMQ41085.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663096.1;locus_tag=AO052_01650;product=Hsp33-like chaperonin;protein_id=TMQ41085.1;transl_table=11
LNKO01000019.1	Genbank	gene	16472	18088	.	+	.	ID=gene-AO052_01655;Name=AO052_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01655
LNKO01000019.1	Protein Homology	CDS	16472	18088	.	+	0	ID=cds-TMQ41086.1;Parent=gene-AO052_01655;Dbxref=NCBI_GP:TMQ41086.1;Name=TMQ41086.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356904.1;locus_tag=AO052_01655;product=phosphoenolpyruvate carboxykinase;protein_id=TMQ41086.1;transl_table=11
LNKO01000019.1	Genbank	gene	18240	18797	.	+	.	ID=gene-AO052_01660;Name=AO052_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01660
LNKO01000019.1	Protein Homology	CDS	18240	18797	.	+	0	ID=cds-TMQ41087.1;Parent=gene-AO052_01660;Dbxref=NCBI_GP:TMQ41087.1;Name=TMQ41087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686003.1;locus_tag=AO052_01660;product=ribosome-recycling factor;protein_id=TMQ41087.1;transl_table=11
LNKO01000019.1	Genbank	gene	18908	20101	.	+	.	ID=gene-AO052_01665;Name=AO052_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01665
LNKO01000019.1	Protein Homology	CDS	18908	20101	.	+	0	ID=cds-TMQ41088.1;Parent=gene-AO052_01665;Dbxref=NCBI_GP:TMQ41088.1;Name=TMQ41088.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701863.1;locus_tag=AO052_01665;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=TMQ41088.1;transl_table=11
LNKO01000019.1	Genbank	gene	20133	20942	.	-	.	ID=gene-AO052_01670;Name=AO052_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01670
LNKO01000019.1	Protein Homology	CDS	20133	20942	.	-	0	ID=cds-TMQ41089.1;Parent=gene-AO052_01670;Dbxref=NCBI_GP:TMQ41089.1;Name=TMQ41089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995481.1;locus_tag=AO052_01670;product=hypothetical protein;protein_id=TMQ41089.1;transl_table=11
LNKO01000019.1	Protein Homology	pseudogene	21076	21776	.	+	.	ID=gene-AO052_01675;Name=AO052_01675;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01675;pseudo=true
LNKO01000019.1	Genbank	gene	21895	22491	.	+	.	ID=gene-AO052_01680;Name=AO052_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01680
LNKO01000019.1	Protein Homology	CDS	21895	22491	.	+	0	ID=cds-TMQ41090.1;Parent=gene-AO052_01680;Dbxref=NCBI_GP:TMQ41090.1;Name=TMQ41090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670086.1;locus_tag=AO052_01680;product=cAMP-binding protein;protein_id=TMQ41090.1;transl_table=11
LNKO01000019.1	Genbank	gene	22618	23004	.	-	.	ID=gene-AO052_01685;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AO052_01685
LNKO01000019.1	Protein Homology	CDS	22618	23004	.	-	0	ID=cds-TMQ41091.1;Parent=gene-AO052_01685;Dbxref=NCBI_GP:TMQ41091.1;Name=TMQ41091.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;inference=EXISTENCE: similar to AA sequence:SwissProt:P44355.1;locus_tag=AO052_01685;product=50S ribosomal protein L17;protein_id=TMQ41091.1;transl_table=11
LNKO01000019.1	Genbank	gene	23045	24031	.	-	.	ID=gene-AO052_01690;Name=AO052_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01690
LNKO01000019.1	Protein Homology	CDS	23045	24031	.	-	0	ID=cds-TMQ41092.1;Parent=gene-AO052_01690;Dbxref=NCBI_GP:TMQ41092.1;Name=TMQ41092.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM97.1;locus_tag=AO052_01690;product=DNA-directed RNA polymerase subunit alpha;protein_id=TMQ41092.1;transl_table=11
LNKO01000019.1	Genbank	gene	24063	24536	.	-	.	ID=gene-AO052_01695;Name=AO052_01695;end_range=24536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01695;partial=true
LNKO01000019.1	Protein Homology	CDS	24063	24536	.	-	0	ID=cds-TMQ41093.1;Parent=gene-AO052_01695;Dbxref=NCBI_GP:TMQ41093.1;Name=TMQ41093.1;end_range=24536,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759597.1;locus_tag=AO052_01695;partial=true;product=30S ribosomal protein S4;protein_id=TMQ41093.1;transl_table=11
##sequence-region LNKO01000020.1 1 15168
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000020.1	Genbank	region	1	15168	.	+	.	ID=LNKO01000020.1:1..15168;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000020.1	Genbank	pseudogene	1	141	.	-	.	ID=gene-AO052_01700;Name=AO052_01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01700;pseudo=true
LNKO01000020.1	Protein Homology	CDS	1	141	.	-	0	ID=cds-AO052_01700;Parent=gene-AO052_01700;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005724013.1;locus_tag=AO052_01700;pseudo=true;transl_table=11
LNKO01000020.1	Genbank	gene	169	558	.	-	.	ID=gene-AO052_01705;Name=AO052_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01705
LNKO01000020.1	Protein Homology	CDS	169	558	.	-	0	ID=cds-TMQ41044.1;Parent=gene-AO052_01705;Dbxref=NCBI_GP:TMQ41044.1;Name=TMQ41044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44379.2;locus_tag=AO052_01705;product=30S ribosomal protein S11;protein_id=TMQ41044.1;transl_table=11
LNKO01000020.1	Genbank	gene	574	930	.	-	.	ID=gene-AO052_01710;Name=AO052_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01710
LNKO01000020.1	Protein Homology	CDS	574	930	.	-	0	ID=cds-TMQ41045.1;Parent=gene-AO052_01710;Dbxref=NCBI_GP:TMQ41045.1;Name=TMQ41045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=AO052_01710;product=30S ribosomal protein S13;protein_id=TMQ41045.1;transl_table=11
LNKO01000020.1	Genbank	gene	1070	1183	.	-	.	ID=gene-AO052_01715;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AO052_01715
LNKO01000020.1	Protein Homology	CDS	1070	1183	.	-	0	ID=cds-TMQ41046.1;Parent=gene-AO052_01715;Dbxref=NCBI_GP:TMQ41046.1;Name=TMQ41046.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250018.1;locus_tag=AO052_01715;product=50S ribosomal protein L36;protein_id=TMQ41046.1;transl_table=11
LNKO01000020.1	Genbank	gene	1212	2537	.	-	.	ID=gene-AO052_01720;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AO052_01720
LNKO01000020.1	Protein Homology	CDS	1212	2537	.	-	0	ID=cds-TMQ41047.1;Parent=gene-AO052_01720;Dbxref=NCBI_GP:TMQ41047.1;Name=TMQ41047.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356919.1;locus_tag=AO052_01720;product=preprotein translocase subunit SecY;protein_id=TMQ41047.1;transl_table=11
LNKO01000020.1	Genbank	gene	2545	2979	.	-	.	ID=gene-AO052_01725;Name=AO052_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01725
LNKO01000020.1	Protein Homology	CDS	2545	2979	.	-	0	ID=cds-TMQ41048.1;Parent=gene-AO052_01725;Dbxref=NCBI_GP:TMQ41048.1;Name=TMQ41048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMA2.1;locus_tag=AO052_01725;product=50S ribosomal protein L15;protein_id=TMQ41048.1;transl_table=11
LNKO01000020.1	Genbank	gene	2983	3162	.	-	.	ID=gene-AO052_01730;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AO052_01730
LNKO01000020.1	Protein Homology	CDS	2983	3162	.	-	0	ID=cds-TMQ41049.1;Parent=gene-AO052_01730;Dbxref=NCBI_GP:TMQ41049.1;Name=TMQ41049.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201188.1;locus_tag=AO052_01730;product=50S ribosomal protein L30;protein_id=TMQ41049.1;transl_table=11
LNKO01000020.1	Genbank	gene	3169	3669	.	-	.	ID=gene-AO052_01735;Name=AO052_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01735
LNKO01000020.1	Protein Homology	CDS	3169	3669	.	-	0	ID=cds-TMQ41050.1;Parent=gene-AO052_01735;Dbxref=NCBI_GP:TMQ41050.1;Name=TMQ41050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356922.1;locus_tag=AO052_01735;product=30S ribosomal protein S5;protein_id=TMQ41050.1;transl_table=11
LNKO01000020.1	Genbank	gene	3684	4037	.	-	.	ID=gene-AO052_01740;Name=AO052_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01740
LNKO01000020.1	Protein Homology	CDS	3684	4037	.	-	0	ID=cds-TMQ41051.1;Parent=gene-AO052_01740;Dbxref=NCBI_GP:TMQ41051.1;Name=TMQ41051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7VKE9.1;locus_tag=AO052_01740;product=50S ribosomal protein L18;protein_id=TMQ41051.1;transl_table=11
LNKO01000020.1	Genbank	gene	4051	4584	.	-	.	ID=gene-AO052_01745;Name=AO052_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01745
LNKO01000020.1	Protein Homology	CDS	4051	4584	.	-	0	ID=cds-TMQ41052.1;Parent=gene-AO052_01745;Dbxref=NCBI_GP:TMQ41052.1;Name=TMQ41052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500767.1;locus_tag=AO052_01745;product=50S ribosomal protein L6;protein_id=TMQ41052.1;transl_table=11
LNKO01000020.1	Genbank	gene	4600	4992	.	-	.	ID=gene-AO052_01750;Name=AO052_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01750
LNKO01000020.1	Protein Homology	CDS	4600	4992	.	-	0	ID=cds-TMQ41053.1;Parent=gene-AO052_01750;Dbxref=NCBI_GP:TMQ41053.1;Name=TMQ41053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65QW9.1;locus_tag=AO052_01750;product=30S ribosomal protein S8;protein_id=TMQ41053.1;transl_table=11
LNKO01000020.1	Genbank	gene	5029	5334	.	-	.	ID=gene-AO052_01755;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AO052_01755
LNKO01000020.1	Protein Homology	CDS	5029	5334	.	-	0	ID=cds-TMQ41054.1;Parent=gene-AO052_01755;Dbxref=NCBI_GP:TMQ41054.1;Name=TMQ41054.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167559.1;locus_tag=AO052_01755;product=30S ribosomal protein S14;protein_id=TMQ41054.1;transl_table=11
LNKO01000020.1	Genbank	gene	5346	5885	.	-	.	ID=gene-AO052_01760;Name=AO052_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01760
LNKO01000020.1	Protein Homology	CDS	5346	5885	.	-	0	ID=cds-TMQ41055.1;Parent=gene-AO052_01760;Dbxref=NCBI_GP:TMQ41055.1;Name=TMQ41055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44346.2;locus_tag=AO052_01760;product=50S ribosomal protein L5;protein_id=TMQ41055.1;transl_table=11
LNKO01000020.1	Genbank	gene	5903	6214	.	-	.	ID=gene-AO052_01765;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AO052_01765
LNKO01000020.1	Protein Homology	CDS	5903	6214	.	-	0	ID=cds-TMQ41056.1;Parent=gene-AO052_01765;Dbxref=NCBI_GP:TMQ41056.1;Name=TMQ41056.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P44362.1;locus_tag=AO052_01765;product=50S ribosomal protein L24;protein_id=TMQ41056.1;transl_table=11
LNKO01000020.1	Genbank	gene	6225	6596	.	-	.	ID=gene-AO052_01770;Name=AO052_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01770
LNKO01000020.1	Protein Homology	CDS	6225	6596	.	-	0	ID=cds-TMQ41057.1;Parent=gene-AO052_01770;Dbxref=NCBI_GP:TMQ41057.1;Name=TMQ41057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005590135.1;locus_tag=AO052_01770;product=50S ribosomal protein L14;protein_id=TMQ41057.1;transl_table=11
LNKO01000020.1	Genbank	gene	6878	7501	.	-	.	ID=gene-AO052_01775;Name=AO052_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01775
LNKO01000020.1	Protein Homology	CDS	6878	7501	.	-	0	ID=cds-TMQ41071.1;Parent=gene-AO052_01775;Dbxref=NCBI_GP:TMQ41071.1;Name=TMQ41071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005685976.1;locus_tag=AO052_01775;product=hypothetical protein;protein_id=TMQ41071.1;transl_table=11
LNKO01000020.1	Genbank	gene	7891	8148	.	-	.	ID=gene-AO052_01780;Name=AO052_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01780
LNKO01000020.1	Protein Homology	CDS	7891	8148	.	-	0	ID=cds-TMQ41058.1;Parent=gene-AO052_01780;Dbxref=NCBI_GP:TMQ41058.1;Name=TMQ41058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005764317.1;locus_tag=AO052_01780;product=30S ribosomal protein S17;protein_id=TMQ41058.1;transl_table=11
LNKO01000020.1	Genbank	gene	8148	8339	.	-	.	ID=gene-AO052_01785;Name=AO052_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01785
LNKO01000020.1	Protein Homology	CDS	8148	8339	.	-	0	ID=cds-TMQ41059.1;Parent=gene-AO052_01785;Dbxref=NCBI_GP:TMQ41059.1;Name=TMQ41059.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695090.1;locus_tag=AO052_01785;product=50S ribosomal protein L29;protein_id=TMQ41059.1;transl_table=11
LNKO01000020.1	Genbank	gene	8339	8749	.	-	.	ID=gene-AO052_01790;Name=AO052_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01790
LNKO01000020.1	Protein Homology	CDS	8339	8749	.	-	0	ID=cds-TMQ41060.1;Parent=gene-AO052_01790;Dbxref=NCBI_GP:TMQ41060.1;Name=TMQ41060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AO052_01790;product=50S ribosomal protein L16;protein_id=TMQ41060.1;transl_table=11
LNKO01000020.1	Genbank	gene	8763	9470	.	-	.	ID=gene-AO052_01795;Name=AO052_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01795
LNKO01000020.1	Protein Homology	CDS	8763	9470	.	-	0	ID=cds-TMQ41061.1;Parent=gene-AO052_01795;Dbxref=NCBI_GP:TMQ41061.1;Name=TMQ41061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526115.1;locus_tag=AO052_01795;product=30S ribosomal protein S3;protein_id=TMQ41061.1;transl_table=11
LNKO01000020.1	Genbank	gene	9488	9820	.	-	.	ID=gene-AO052_01800;Name=AO052_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01800
LNKO01000020.1	Protein Homology	CDS	9488	9820	.	-	0	ID=cds-TMQ41062.1;Parent=gene-AO052_01800;Dbxref=NCBI_GP:TMQ41062.1;Name=TMQ41062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AO052_01800;product=50S ribosomal protein L22;protein_id=TMQ41062.1;transl_table=11
LNKO01000020.1	Genbank	gene	9832	10107	.	-	.	ID=gene-AO052_01805;Name=AO052_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01805
LNKO01000020.1	Protein Homology	CDS	9832	10107	.	-	0	ID=cds-TMQ41063.1;Parent=gene-AO052_01805;Dbxref=NCBI_GP:TMQ41063.1;Name=TMQ41063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745959.1;locus_tag=AO052_01805;product=30S ribosomal protein S19;protein_id=TMQ41063.1;transl_table=11
LNKO01000020.1	Genbank	gene	10133	10954	.	-	.	ID=gene-AO052_01810;Name=AO052_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01810
LNKO01000020.1	Protein Homology	CDS	10133	10954	.	-	0	ID=cds-TMQ41064.1;Parent=gene-AO052_01810;Dbxref=NCBI_GP:TMQ41064.1;Name=TMQ41064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805226.1;locus_tag=AO052_01810;product=50S ribosomal protein L2;protein_id=TMQ41064.1;transl_table=11
LNKO01000020.1	Genbank	gene	10972	11271	.	-	.	ID=gene-AO052_01815;Name=AO052_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01815
LNKO01000020.1	Protein Homology	CDS	10972	11271	.	-	0	ID=cds-TMQ41065.1;Parent=gene-AO052_01815;Dbxref=NCBI_GP:TMQ41065.1;Name=TMQ41065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356228.1;locus_tag=AO052_01815;product=50S ribosomal protein L23;protein_id=TMQ41065.1;transl_table=11
LNKO01000020.1	Genbank	gene	11268	11870	.	-	.	ID=gene-AO052_01820;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AO052_01820
LNKO01000020.1	Protein Homology	CDS	11268	11870	.	-	0	ID=cds-TMQ41066.1;Parent=gene-AO052_01820;Dbxref=NCBI_GP:TMQ41066.1;Name=TMQ41066.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356227.1;locus_tag=AO052_01820;product=50S ribosomal protein L4;protein_id=TMQ41066.1;transl_table=11
LNKO01000020.1	Genbank	gene	11886	12512	.	-	.	ID=gene-AO052_01825;Name=AO052_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01825
LNKO01000020.1	Protein Homology	CDS	11886	12512	.	-	0	ID=cds-TMQ41067.1;Parent=gene-AO052_01825;Dbxref=NCBI_GP:TMQ41067.1;Name=TMQ41067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44344.1;locus_tag=AO052_01825;product=50S ribosomal protein L3;protein_id=TMQ41067.1;transl_table=11
LNKO01000020.1	Genbank	gene	12529	12840	.	-	.	ID=gene-AO052_01830;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=AO052_01830
LNKO01000020.1	Protein Homology	CDS	12529	12840	.	-	0	ID=cds-TMQ41068.1;Parent=gene-AO052_01830;Dbxref=NCBI_GP:TMQ41068.1;Name=TMQ41068.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AO052_01830;product=30S ribosomal protein S10;protein_id=TMQ41068.1;transl_table=11
LNKO01000020.1	Genbank	gene	13160	14092	.	-	.	ID=gene-AO052_01835;Name=AO052_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01835
LNKO01000020.1	Protein Homology	CDS	13160	14092	.	-	0	ID=cds-TMQ41069.1;Parent=gene-AO052_01835;Dbxref=NCBI_GP:TMQ41069.1;Name=TMQ41069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551072.1;locus_tag=AO052_01835;product=cell division protein FtsX;protein_id=TMQ41069.1;transl_table=11
LNKO01000020.1	Genbank	gene	14102	14758	.	-	.	ID=gene-AO052_01840;Name=AO052_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01840
LNKO01000020.1	Protein Homology	CDS	14102	14758	.	-	0	ID=cds-TMQ41070.1;Parent=gene-AO052_01840;Dbxref=NCBI_GP:TMQ41070.1;Name=TMQ41070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44871.1;locus_tag=AO052_01840;product=cell division ATP-binding protein FtsE;protein_id=TMQ41070.1;transl_table=11
LNKO01000020.1	Genbank	pseudogene	14777	15168	.	-	.	ID=gene-AO052_01845;Name=AO052_01845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_01845;pseudo=true
LNKO01000020.1	Protein Homology	CDS	14777	15168	.	-	2	ID=cds-AO052_01845;Parent=gene-AO052_01845;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632749.1;locus_tag=AO052_01845;pseudo=true;transl_table=11
##sequence-region LNKO01000021.1 1 6517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000021.1	Genbank	region	1	6517	.	+	.	ID=LNKO01000021.1:1..6517;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000021.1	Genbank	gene	1	800	.	-	.	ID=gene-AO052_01850;Name=AO052_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01850;partial=true;start_range=.,1
LNKO01000021.1	Protein Homology	CDS	1	800	.	-	0	ID=cds-TMQ41037.1;Parent=gene-AO052_01850;Dbxref=NCBI_GP:TMQ41037.1;Name=TMQ41037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652357.1;locus_tag=AO052_01850;partial=true;product=cell division protein FtsY;protein_id=TMQ41037.1;start_range=.,1;transl_table=11
LNKO01000021.1	Genbank	gene	897	1478	.	+	.	ID=gene-AO052_01855;Name=AO052_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01855
LNKO01000021.1	Protein Homology	CDS	897	1478	.	+	0	ID=cds-TMQ41038.1;Parent=gene-AO052_01855;Dbxref=NCBI_GP:TMQ41038.1;Name=TMQ41038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44869.1;locus_tag=AO052_01855;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TMQ41038.1;transl_table=11
LNKO01000021.1	Genbank	gene	1489	1971	.	+	.	ID=gene-AO052_01860;Name=AO052_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01860
LNKO01000021.1	Protein Homology	CDS	1489	1971	.	+	0	ID=cds-TMQ41039.1;Parent=gene-AO052_01860;Dbxref=NCBI_GP:TMQ41039.1;Name=TMQ41039.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689062.1;locus_tag=AO052_01860;product=rRNA methylase;protein_id=TMQ41039.1;transl_table=11
LNKO01000021.1	Genbank	gene	2020	2856	.	-	.	ID=gene-AO052_01865;Name=AO052_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01865
LNKO01000021.1	Protein Homology	CDS	2020	2856	.	-	0	ID=cds-TMQ41040.1;Parent=gene-AO052_01865;Dbxref=NCBI_GP:TMQ41040.1;Name=TMQ41040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526288.1;locus_tag=AO052_01865;product=lipooligosaccharide biosynthesis protein lpsA;protein_id=TMQ41040.1;transl_table=11
LNKO01000021.1	Genbank	gene	2883	3530	.	-	.	ID=gene-AO052_01870;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AO052_01870
LNKO01000021.1	Protein Homology	CDS	2883	3530	.	-	0	ID=cds-TMQ41041.1;Parent=gene-AO052_01870;Dbxref=NCBI_GP:TMQ41041.1;Name=TMQ41041.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551076.1;locus_tag=AO052_01870;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=TMQ41041.1;transl_table=11
LNKO01000021.1	cmsearch	binding_site	3619	3796	.	-	.	ID=id-LNKO01000021.1:3619..3796;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=misc_binding
LNKO01000021.1	Genbank	gene	3749	5014	.	+	.	ID=gene-AO052_01875;Name=AO052_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01875
LNKO01000021.1	Protein Homology	CDS	3749	5014	.	+	0	ID=cds-TMQ41042.1;Parent=gene-AO052_01875;Dbxref=NCBI_GP:TMQ41042.1;Name=TMQ41042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44308.1;locus_tag=AO052_01875;product=ribosylnicotinamide kinase;protein_id=TMQ41042.1;transl_table=11
LNKO01000021.1	Genbank	gene	5011	5691	.	+	.	ID=gene-AO052_01880;Name=AO052_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01880
LNKO01000021.1	Protein Homology	CDS	5011	5691	.	+	0	ID=cds-TMQ41043.1;Parent=gene-AO052_01880;Dbxref=NCBI_GP:TMQ41043.1;Name=TMQ41043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640958.1;locus_tag=AO052_01880;product=hypothetical protein;protein_id=TMQ41043.1;transl_table=11
LNKO01000021.1	Genbank	gene	5910	5985	.	-	.	ID=gene-AO052_01885;Name=AO052_01885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_01885
LNKO01000021.1	tRNAscan-SE	tRNA	5910	5985	.	-	.	ID=rna-AO052_01885;Parent=gene-AO052_01885;anticodon=(pos:complement(5950..5952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01885;product=tRNA-Asn
LNKO01000021.1	tRNAscan-SE	exon	5910	5985	.	-	.	ID=exon-AO052_01885-1;Parent=rna-AO052_01885;anticodon=(pos:complement(5950..5952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01885;product=tRNA-Asn
LNKO01000021.1	Genbank	gene	5988	6063	.	-	.	ID=gene-AO052_01890;Name=AO052_01890;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_01890
LNKO01000021.1	tRNAscan-SE	tRNA	5988	6063	.	-	.	ID=rna-AO052_01890;Parent=gene-AO052_01890;anticodon=(pos:complement(6028..6030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01890;product=tRNA-Phe
LNKO01000021.1	tRNAscan-SE	exon	5988	6063	.	-	.	ID=exon-AO052_01890-1;Parent=rna-AO052_01890;anticodon=(pos:complement(6028..6030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_01890;product=tRNA-Phe
LNKO01000021.1	Genbank	pseudogene	6301	6517	.	-	.	ID=gene-AO052_01895;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=pseudogene;locus_tag=AO052_01895;pseudo=true
LNKO01000021.1	Protein Homology	CDS	6301	6517	.	-	1	ID=cds-AO052_01895;Parent=gene-AO052_01895;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;inference=EXISTENCE: similar to AA sequence:SwissProt:P44049.1;locus_tag=AO052_01895;pseudo=true;transl_table=11
##sequence-region LNKO01000022.1 1 12228
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000022.1	Genbank	region	1	12228	.	+	.	ID=LNKO01000022.1:1..12228;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000022.1	Genbank	gene	1	857	.	-	.	ID=gene-AO052_01900;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AO052_01900;partial=true;start_range=.,1
LNKO01000022.1	Protein Homology	CDS	1	857	.	-	0	ID=cds-TMQ41027.1;Parent=gene-AO052_01900;Dbxref=NCBI_GP:TMQ41027.1;Name=TMQ41027.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;inference=EXISTENCE: similar to AA sequence:SwissProt:P44049.1;locus_tag=AO052_01900;partial=true;product=murein transglycosylase;protein_id=TMQ41027.1;start_range=.,1;transl_table=11
LNKO01000022.1	Genbank	gene	872	1144	.	-	.	ID=gene-AO052_01905;Name=AO052_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01905
LNKO01000022.1	Protein Homology	CDS	872	1144	.	-	0	ID=cds-TMQ41028.1;Parent=gene-AO052_01905;Dbxref=NCBI_GP:TMQ41028.1;Name=TMQ41028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44048.1;locus_tag=AO052_01905;product=iron transporter;protein_id=TMQ41028.1;transl_table=11
LNKO01000022.1	Genbank	gene	1122	2258	.	-	.	ID=gene-AO052_01910;Name=AO052_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01910
LNKO01000022.1	Protein Homology	CDS	1122	2258	.	-	0	ID=cds-TMQ41029.1;Parent=gene-AO052_01910;Dbxref=NCBI_GP:TMQ41029.1;Name=TMQ41029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44320.1;locus_tag=AO052_01910;product=A/G-specific adenine glycosylase;protein_id=TMQ41029.1;transl_table=11
LNKO01000022.1	Genbank	gene	2435	2647	.	+	.	ID=gene-AO052_01915;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AO052_01915
LNKO01000022.1	Protein Homology	CDS	2435	2647	.	+	0	ID=cds-TMQ41030.1;Parent=gene-AO052_01915;Dbxref=NCBI_GP:TMQ41030.1;Name=TMQ41030.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;inference=EXISTENCE: similar to AA sequence:SwissProt:P44367.1;locus_tag=AO052_01915;product=50S ribosomal protein L31;protein_id=TMQ41030.1;transl_table=11
LNKO01000022.1	Genbank	gene	2725	3408	.	-	.	ID=gene-AO052_01920;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AO052_01920
LNKO01000022.1	Protein Homology	CDS	2725	3408	.	-	0	ID=cds-TMQ41031.1;Parent=gene-AO052_01920;Dbxref=NCBI_GP:TMQ41031.1;Name=TMQ41031.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356893.1;locus_tag=AO052_01920;product=phosphoglyceromutase;protein_id=TMQ41031.1;transl_table=11
LNKO01000022.1	Genbank	gene	3584	4795	.	+	.	ID=gene-AO052_01925;Name=AO052_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01925
LNKO01000022.1	Protein Homology	CDS	3584	4795	.	+	0	ID=cds-TMQ41032.1;Parent=gene-AO052_01925;Dbxref=NCBI_GP:TMQ41032.1;Name=TMQ41032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526292.1;locus_tag=AO052_01925;product=hypothetical protein;protein_id=TMQ41032.1;transl_table=11
LNKO01000022.1	Genbank	gene	4795	5637	.	+	.	ID=gene-AO052_01930;Name=AO052_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01930
LNKO01000022.1	Protein Homology	CDS	4795	5637	.	+	0	ID=cds-TMQ41033.1;Parent=gene-AO052_01930;Dbxref=NCBI_GP:TMQ41033.1;Name=TMQ41033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526293.1;locus_tag=AO052_01930;product=hypothetical protein;protein_id=TMQ41033.1;transl_table=11
LNKO01000022.1	Genbank	gene	5690	6433	.	-	.	ID=gene-AO052_01935;Name=AO052_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01935
LNKO01000022.1	Protein Homology	CDS	5690	6433	.	-	0	ID=cds-TMQ41034.1;Parent=gene-AO052_01935;Dbxref=NCBI_GP:TMQ41034.1;Name=TMQ41034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701846.1;locus_tag=AO052_01935;product=UDP-glucose--lipooligosaccharide glucosyltransferase;protein_id=TMQ41034.1;transl_table=11
LNKO01000022.1	Genbank	gene	6932	10825	.	-	.	ID=gene-AO052_01940;Name=AO052_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01940
LNKO01000022.1	Protein Homology	CDS	6932	10825	.	-	0	ID=cds-TMQ41035.1;Parent=gene-AO052_01940;Dbxref=NCBI_GP:TMQ41035.1;Name=TMQ41035.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666253.1;locus_tag=AO052_01940;product=phosphoribosylformylglycinamidine synthase;protein_id=TMQ41035.1;transl_table=11
LNKO01000022.1	Genbank	gene	11457	11954	.	+	.	ID=gene-AO052_01945;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AO052_01945
LNKO01000022.1	Protein Homology	CDS	11457	11954	.	+	0	ID=cds-TMQ41036.1;Parent=gene-AO052_01945;Dbxref=NCBI_GP:TMQ41036.1;Name=TMQ41036.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666256.1;locus_tag=AO052_01945;product=peroxidase;protein_id=TMQ41036.1;transl_table=11
##sequence-region LNKO01000023.1 1 21818
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000023.1	Genbank	region	1	21818	.	+	.	ID=LNKO01000023.1:1..21818;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000023.1	Genbank	gene	1	770	.	-	.	ID=gene-AO052_01950;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AO052_01950;partial=true;start_range=.,1
LNKO01000023.1	Protein Homology	CDS	1	770	.	-	0	ID=cds-TMQ41007.1;Parent=gene-AO052_01950;Dbxref=NCBI_GP:TMQ41007.1;Name=TMQ41007.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44859.1;locus_tag=AO052_01950;partial=true;product=diaminopimelate epimerase;protein_id=TMQ41007.1;start_range=.,1;transl_table=11
LNKO01000023.1	Genbank	gene	913	1536	.	-	.	ID=gene-AO052_01955;Name=AO052_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01955
LNKO01000023.1	Protein Homology	CDS	913	1536	.	-	0	ID=cds-TMQ41008.1;Parent=gene-AO052_01955;Dbxref=NCBI_GP:TMQ41008.1;Name=TMQ41008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692649.1;locus_tag=AO052_01955;product=LexA family transcriptional regulator;protein_id=TMQ41008.1;transl_table=11
LNKO01000023.1	Genbank	gene	1791	4223	.	+	.	ID=gene-AO052_01960;Name=AO052_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01960
LNKO01000023.1	Protein Homology	CDS	1791	4223	.	+	0	ID=cds-TMQ41009.1;Parent=gene-AO052_01960;Dbxref=NCBI_GP:TMQ41009.1;Name=TMQ41009.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDX7.1;locus_tag=AO052_01960;product=glycerol-3-phosphate O-acyltransferase;protein_id=TMQ41009.1;transl_table=11
LNKO01000023.1	Genbank	gene	4303	5637	.	-	.	ID=gene-AO052_01965;Name=AO052_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01965
LNKO01000023.1	Protein Homology	CDS	4303	5637	.	-	0	ID=cds-TMQ41010.1;Parent=gene-AO052_01965;Dbxref=NCBI_GP:TMQ41010.1;Name=TMQ41010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44856.1;locus_tag=AO052_01965;product=NADH dehydrogenase;protein_id=TMQ41010.1;transl_table=11
LNKO01000023.1	Genbank	gene	5841	7163	.	-	.	ID=gene-AO052_01970;Name=AO052_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01970
LNKO01000023.1	Protein Homology	CDS	5841	7163	.	-	0	ID=cds-TMQ41011.1;Parent=gene-AO052_01970;Dbxref=NCBI_GP:TMQ41011.1;Name=TMQ41011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055214.1;locus_tag=AO052_01970;product=C4-dicarboxylate ABC transporter;protein_id=TMQ41011.1;transl_table=11
LNKO01000023.1	Genbank	gene	7410	7856	.	+	.	ID=gene-AO052_01975;Name=AO052_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01975
LNKO01000023.1	Protein Homology	CDS	7410	7856	.	+	0	ID=cds-TMQ41012.1;Parent=gene-AO052_01975;Dbxref=NCBI_GP:TMQ41012.1;Name=TMQ41012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629414.1;locus_tag=AO052_01975;product=hypothetical protein;protein_id=TMQ41012.1;transl_table=11
LNKO01000023.1	Genbank	gene	7870	8379	.	+	.	ID=gene-AO052_01980;Name=AO052_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01980
LNKO01000023.1	Protein Homology	CDS	7870	8379	.	+	0	ID=cds-TMQ41013.1;Parent=gene-AO052_01980;Dbxref=NCBI_GP:TMQ41013.1;Name=TMQ41013.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551082.1;locus_tag=AO052_01980;product=preprotein translocase subunit SecB;protein_id=TMQ41013.1;transl_table=11
LNKO01000023.1	Genbank	gene	8541	10193	.	-	.	ID=gene-AO052_01985;Name=AO052_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01985
LNKO01000023.1	Protein Homology	CDS	8541	10193	.	-	0	ID=cds-TMQ41014.1;Parent=gene-AO052_01985;Dbxref=NCBI_GP:TMQ41014.1;Name=TMQ41014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692659.1;locus_tag=AO052_01985;product=alpha-D-phosphohexomutase;protein_id=TMQ41014.1;transl_table=11
LNKO01000023.1	Genbank	gene	10432	13911	.	+	.	ID=gene-AO052_01990;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AO052_01990
LNKO01000023.1	Protein Homology	CDS	10432	13911	.	+	0	ID=cds-TMQ41015.1;Parent=gene-AO052_01990;Dbxref=NCBI_GP:TMQ41015.1;Name=TMQ41015.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701839.1;locus_tag=AO052_01990;product=DNA polymerase III subunit alpha;protein_id=TMQ41015.1;transl_table=11
LNKO01000023.1	Genbank	gene	13950	15491	.	-	.	ID=gene-AO052_01995;Name=AO052_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_01995
LNKO01000023.1	Protein Homology	CDS	13950	15491	.	-	0	ID=cds-TMQ41016.1;Parent=gene-AO052_01995;Dbxref=NCBI_GP:TMQ41016.1;Name=TMQ41016.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551086.1;locus_tag=AO052_01995;product=threonine dehydratase;protein_id=TMQ41016.1;transl_table=11
LNKO01000023.1	Genbank	gene	15570	17408	.	-	.	ID=gene-AO052_02000;Name=AO052_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02000
LNKO01000023.1	Protein Homology	CDS	15570	17408	.	-	0	ID=cds-TMQ41017.1;Parent=gene-AO052_02000;Dbxref=NCBI_GP:TMQ41017.1;Name=TMQ41017.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHP2.1;locus_tag=AO052_02000;product=dihydroxy-acid dehydratase;protein_id=TMQ41017.1;transl_table=11
LNKO01000023.1	Genbank	gene	17450	18118	.	-	.	ID=gene-AO052_02005;Name=AO052_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02005
LNKO01000023.1	Protein Homology	CDS	17450	18118	.	-	0	ID=cds-TMQ41018.1;Parent=gene-AO052_02005;Dbxref=NCBI_GP:TMQ41018.1;Name=TMQ41018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526303.1;locus_tag=AO052_02005;product=hypothetical protein;protein_id=TMQ41018.1;transl_table=11
LNKO01000023.1	Genbank	gene	18364	19890	.	+	.	ID=gene-AO052_02010;Name=AO052_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02010
LNKO01000023.1	Protein Homology	CDS	18364	19890	.	+	0	ID=cds-TMQ41019.1;Parent=gene-AO052_02010;Dbxref=NCBI_GP:TMQ41019.1;Name=TMQ41019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272200.1;locus_tag=AO052_02010;product=transporter;protein_id=TMQ41019.1;transl_table=11
LNKO01000023.1	Genbank	gene	20120	20833	.	-	.	ID=gene-AO052_02015;Name=AO052_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02015
LNKO01000023.1	Protein Homology	CDS	20120	20833	.	-	0	ID=cds-TMQ41020.1;Parent=gene-AO052_02015;Dbxref=NCBI_GP:TMQ41020.1;Name=TMQ41020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669966.1;locus_tag=AO052_02015;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=TMQ41020.1;transl_table=11
LNKO01000023.1	Genbank	gene	20919	21641	.	+	.	ID=gene-AO052_02020;Name=AO052_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02020
LNKO01000023.1	Protein Homology	CDS	20919	21641	.	+	0	ID=cds-TMQ41021.1;Parent=gene-AO052_02020;Dbxref=NCBI_GP:TMQ41021.1;Name=TMQ41021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551088.1;locus_tag=AO052_02020;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=TMQ41021.1;transl_table=11
LNKO01000023.1	Genbank	pseudogene	21643	21818	.	+	.	ID=gene-AO052_02025;Name=AO052_02025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02025;pseudo=true
LNKO01000023.1	Protein Homology	CDS	21643	21818	.	+	0	ID=cds-AO052_02025;Parent=gene-AO052_02025;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44847.1;locus_tag=AO052_02025;pseudo=true;transl_table=11
##sequence-region LNKO01000024.1 1 12861
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000024.1	Genbank	region	1	12861	.	+	.	ID=LNKO01000024.1:1..12861;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000024.1	Genbank	pseudogene	1	1321	.	+	.	ID=gene-AO052_02030;Name=AO052_02030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02030;pseudo=true
LNKO01000024.1	Protein Homology	CDS	1	1321	.	+	1	ID=cds-AO052_02030;Parent=gene-AO052_02030;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO052_02030;pseudo=true;transl_table=11
LNKO01000024.1	Genbank	gene	1374	2516	.	+	.	ID=gene-AO052_02035;Name=AO052_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02035
LNKO01000024.1	Protein Homology	CDS	1374	2516	.	+	0	ID=cds-TMQ40958.1;Parent=gene-AO052_02035;Dbxref=NCBI_GP:TMQ40958.1;Name=TMQ40958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995804.1;locus_tag=AO052_02035;product=hypothetical protein;protein_id=TMQ40958.1;transl_table=11
LNKO01000024.1	Protein Homology	pseudogene	2520	3732	.	+	.	ID=gene-AO052_02040;Name=AO052_02040;Note=disrupted;description=glycosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02040;pseudo=true
LNKO01000024.1	Genbank	gene	3736	4872	.	+	.	ID=gene-AO052_02045;Name=AO052_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02045
LNKO01000024.1	Protein Homology	CDS	3736	4872	.	+	0	ID=cds-TMQ40959.1;Parent=gene-AO052_02045;Dbxref=NCBI_GP:TMQ40959.1;Name=TMQ40959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995802.1;locus_tag=AO052_02045;product=hypothetical protein;protein_id=TMQ40959.1;transl_table=11
LNKO01000024.1	Genbank	gene	4875	5345	.	+	.	ID=gene-AO052_02050;Name=AO052_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02050
LNKO01000024.1	Protein Homology	CDS	4875	5345	.	+	0	ID=cds-TMQ40960.1;Parent=gene-AO052_02050;Dbxref=NCBI_GP:TMQ40960.1;Name=TMQ40960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012367281.1;locus_tag=AO052_02050;product=hypothetical protein;protein_id=TMQ40960.1;transl_table=11
LNKO01000024.1	Genbank	gene	5492	6100	.	+	.	ID=gene-AO052_02055;Name=AO052_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02055
LNKO01000024.1	Protein Homology	CDS	5492	6100	.	+	0	ID=cds-TMQ40961.1;Parent=gene-AO052_02055;Dbxref=NCBI_GP:TMQ40961.1;Name=TMQ40961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525675.1;locus_tag=AO052_02055;product=hypothetical protein;protein_id=TMQ40961.1;transl_table=11
LNKO01000024.1	Genbank	gene	6147	7703	.	-	.	ID=gene-AO052_02060;Name=AO052_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02060
LNKO01000024.1	Protein Homology	CDS	6147	7703	.	-	0	ID=cds-TMQ40962.1;Parent=gene-AO052_02060;Dbxref=NCBI_GP:TMQ40962.1;Name=TMQ40962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527555.1;locus_tag=AO052_02060;product=hypothetical protein;protein_id=TMQ40962.1;transl_table=11
LNKO01000024.1	Genbank	gene	7700	8833	.	-	.	ID=gene-AO052_02065;Name=AO052_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02065
LNKO01000024.1	Protein Homology	CDS	7700	8833	.	-	0	ID=cds-TMQ40963.1;Parent=gene-AO052_02065;Dbxref=NCBI_GP:TMQ40963.1;Name=TMQ40963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995799.1;locus_tag=AO052_02065;product=hypothetical protein;protein_id=TMQ40963.1;transl_table=11
LNKO01000024.1	Genbank	gene	8951	9754	.	-	.	ID=gene-AO052_02070;Name=AO052_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02070
LNKO01000024.1	Protein Homology	CDS	8951	9754	.	-	0	ID=cds-TMQ40964.1;Parent=gene-AO052_02070;Dbxref=NCBI_GP:TMQ40964.1;Name=TMQ40964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702482.1;locus_tag=AO052_02070;product=amylovoran biosynthesis protein AmsE;protein_id=TMQ40964.1;transl_table=11
LNKO01000024.1	Genbank	gene	9756	10640	.	-	.	ID=gene-AO052_02075;Name=AO052_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02075
LNKO01000024.1	Protein Homology	CDS	9756	10640	.	-	0	ID=cds-TMQ40965.1;Parent=gene-AO052_02075;Dbxref=NCBI_GP:TMQ40965.1;Name=TMQ40965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995796.1;locus_tag=AO052_02075;product=glycosyltransferase;protein_id=TMQ40965.1;transl_table=11
LNKO01000024.1	Genbank	gene	10652	11425	.	-	.	ID=gene-AO052_02080;Name=AO052_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02080
LNKO01000024.1	Protein Homology	CDS	10652	11425	.	-	0	ID=cds-TMQ40966.1;Parent=gene-AO052_02080;Dbxref=NCBI_GP:TMQ40966.1;Name=TMQ40966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688021.1;locus_tag=AO052_02080;product=Lsg locus protein 4;protein_id=TMQ40966.1;transl_table=11
LNKO01000024.1	Genbank	gene	11437	12498	.	-	.	ID=gene-AO052_02085;Name=AO052_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02085
LNKO01000024.1	Protein Homology	CDS	11437	12498	.	-	0	ID=cds-TMQ40967.1;Parent=gene-AO052_02085;Dbxref=NCBI_GP:TMQ40967.1;Name=TMQ40967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272754.1;locus_tag=AO052_02085;product=glycosyl transferase family 1;protein_id=TMQ40967.1;transl_table=11
LNKO01000024.1	Genbank	pseudogene	12500	12861	.	-	.	ID=gene-AO052_02090;Name=AO052_02090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02090;pseudo=true
LNKO01000024.1	Protein Homology	CDS	12500	12861	.	-	2	ID=cds-AO052_02090;Parent=gene-AO052_02090;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636790.1;locus_tag=AO052_02090;pseudo=true;transl_table=11
##sequence-region LNKO01000025.1 1 11372
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000025.1	Genbank	region	1	11372	.	+	.	ID=LNKO01000025.1:1..11372;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000025.1	Genbank	gene	1	551	.	-	.	ID=gene-AO052_02095;Name=AO052_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02095;partial=true;start_range=.,1
LNKO01000025.1	Protein Homology	CDS	1	551	.	-	0	ID=cds-TMQ40918.1;Parent=gene-AO052_02095;Dbxref=NCBI_GP:TMQ40918.1;Name=TMQ40918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649995.1;locus_tag=AO052_02095;partial=true;product=CMP-N-acetylneuraminate-beta-galactosamide-alpha-2%2C 3-sialyltransferase;protein_id=TMQ40918.1;start_range=.,1;transl_table=11
LNKO01000025.1	Genbank	gene	548	1753	.	-	.	ID=gene-AO052_02100;Name=AO052_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02100
LNKO01000025.1	Protein Homology	CDS	548	1753	.	-	0	ID=cds-TMQ40919.1;Parent=gene-AO052_02100;Dbxref=NCBI_GP:TMQ40919.1;Name=TMQ40919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631946.1;locus_tag=AO052_02100;product=Lsg locus protein 1;protein_id=TMQ40919.1;transl_table=11
LNKO01000025.1	Genbank	gene	1888	2631	.	+	.	ID=gene-AO052_02105;Name=AO052_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02105
LNKO01000025.1	Protein Homology	CDS	1888	2631	.	+	0	ID=cds-TMQ40920.1;Parent=gene-AO052_02105;Dbxref=NCBI_GP:TMQ40920.1;Name=TMQ40920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702488.1;locus_tag=AO052_02105;product=hypothetical protein;protein_id=TMQ40920.1;transl_table=11
LNKO01000025.1	Genbank	gene	2852	5122	.	-	.	ID=gene-AO052_02110;Name=AO052_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02110
LNKO01000025.1	Protein Homology	CDS	2852	5122	.	-	0	ID=cds-TMQ40921.1;Parent=gene-AO052_02110;Dbxref=NCBI_GP:TMQ40921.1;Name=TMQ40921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499902.1;locus_tag=AO052_02110;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=TMQ40921.1;transl_table=11
LNKO01000025.1	Genbank	gene	5316	6392	.	-	.	ID=gene-AO052_02115;Name=AO052_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02115
LNKO01000025.1	Protein Homology	CDS	5316	6392	.	-	0	ID=cds-TMQ40922.1;Parent=gene-AO052_02115;Dbxref=NCBI_GP:TMQ40922.1;Name=TMQ40922.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661087.1;locus_tag=AO052_02115;product=LPS export ABC transporter permease LptG;protein_id=TMQ40922.1;transl_table=11
LNKO01000025.1	Genbank	gene	6398	7492	.	-	.	ID=gene-AO052_02120;Name=AO052_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02120
LNKO01000025.1	Protein Homology	CDS	6398	7492	.	-	0	ID=cds-TMQ40923.1;Parent=gene-AO052_02120;Dbxref=NCBI_GP:TMQ40923.1;Name=TMQ40923.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525669.1;locus_tag=AO052_02120;product=LPS export ABC transporter permease LptF;protein_id=TMQ40923.1;transl_table=11
LNKO01000025.1	Genbank	gene	7600	9075	.	+	.	ID=gene-AO052_02125;Name=AO052_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02125
LNKO01000025.1	Protein Homology	CDS	7600	9075	.	+	0	ID=cds-TMQ40924.1;Parent=gene-AO052_02125;Dbxref=NCBI_GP:TMQ40924.1;Name=TMQ40924.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702491.1;locus_tag=AO052_02125;product=aminopeptidase;protein_id=TMQ40924.1;transl_table=11
LNKO01000025.1	Genbank	pseudogene	9111	10895	.	-	.	ID=gene-AO052_02130;Name=AO052_02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02130;pseudo=true
LNKO01000025.1	Protein Homology	CDS	9111	10895	.	-	0	ID=cds-AO052_02130;Parent=gene-AO052_02130;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995786.1;locus_tag=AO052_02130;pseudo=true;transl_table=11
##sequence-region LNKO01000026.1 1 373
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000026.1	Genbank	region	1	373	.	+	.	ID=LNKO01000026.1:1..373;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000026.1	Genbank	gene	1	364	.	-	.	ID=gene-AO052_02135;Name=AO052_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02135;partial=true;start_range=.,1
LNKO01000026.1	Protein Homology	CDS	1	364	.	-	0	ID=cds-TMQ40886.1;Parent=gene-AO052_02135;Dbxref=NCBI_GP:TMQ40886.1;Name=TMQ40886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657715.1;locus_tag=AO052_02135;partial=true;product=ci repressor-like protein;protein_id=TMQ40886.1;start_range=.,1;transl_table=11
##sequence-region LNKO01000027.1 1 6557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000027.1	Genbank	region	1	6557	.	+	.	ID=LNKO01000027.1:1..6557;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000027.1	Genbank	gene	201	428	.	+	.	ID=gene-AO052_02140;Name=AO052_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02140
LNKO01000027.1	Protein Homology	CDS	201	428	.	+	0	ID=cds-TMQ40859.1;Parent=gene-AO052_02140;Dbxref=NCBI_GP:TMQ40859.1;Name=TMQ40859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657714.1;locus_tag=AO052_02140;product=DNA-binding protein;protein_id=TMQ40859.1;transl_table=11
LNKO01000027.1	Genbank	gene	439	2448	.	+	.	ID=gene-AO052_02145;Name=AO052_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02145
LNKO01000027.1	Protein Homology	CDS	439	2448	.	+	0	ID=cds-TMQ40860.1;Parent=gene-AO052_02145;Dbxref=NCBI_GP:TMQ40860.1;Name=TMQ40860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525667.1;locus_tag=AO052_02145;product=transposase;protein_id=TMQ40860.1;transl_table=11
LNKO01000027.1	Protein Homology	pseudogene	2475	3391	.	+	.	ID=gene-AO052_02150;Name=AO052_02150;Note=disrupted;description=DNA transposition protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02150;pseudo=true
LNKO01000027.1	Genbank	gene	3391	3594	.	+	.	ID=gene-AO052_02155;Name=AO052_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02155
LNKO01000027.1	Protein Homology	CDS	3391	3594	.	+	0	ID=cds-TMQ40861.1;Parent=gene-AO052_02155;Dbxref=NCBI_GP:TMQ40861.1;Name=TMQ40861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657708.1;locus_tag=AO052_02155;product=hypothetical protein;protein_id=TMQ40861.1;transl_table=11
LNKO01000027.1	Genbank	gene	3616	4134	.	+	.	ID=gene-AO052_02160;Name=AO052_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02160
LNKO01000027.1	Protein Homology	CDS	3616	4134	.	+	0	ID=cds-TMQ40862.1;Parent=gene-AO052_02160;Dbxref=NCBI_GP:TMQ40862.1;Name=TMQ40862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660799.1;locus_tag=AO052_02160;product=host-nuclease inhibitor protein Gam;protein_id=TMQ40862.1;transl_table=11
LNKO01000027.1	Genbank	gene	4239	4436	.	+	.	ID=gene-AO052_02165;Name=AO052_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02165
LNKO01000027.1	Protein Homology	CDS	4239	4436	.	+	0	ID=cds-TMQ40863.1;Parent=gene-AO052_02165;Dbxref=NCBI_GP:TMQ40863.1;Name=TMQ40863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641531.1;locus_tag=AO052_02165;product=hypothetical protein;protein_id=TMQ40863.1;transl_table=11
LNKO01000027.1	Genbank	gene	4601	4819	.	+	.	ID=gene-AO052_02170;Name=AO052_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02170
LNKO01000027.1	Protein Homology	CDS	4601	4819	.	+	0	ID=cds-TMQ40864.1;Parent=gene-AO052_02170;Dbxref=NCBI_GP:TMQ40864.1;Name=TMQ40864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643762.1;locus_tag=AO052_02170;product=hypothetical protein;protein_id=TMQ40864.1;transl_table=11
LNKO01000027.1	Genbank	gene	4892	5266	.	+	.	ID=gene-AO052_02175;Name=AO052_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02175
LNKO01000027.1	Protein Homology	CDS	4892	5266	.	+	0	ID=cds-TMQ40865.1;Parent=gene-AO052_02175;Dbxref=NCBI_GP:TMQ40865.1;Name=TMQ40865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525663.1;locus_tag=AO052_02175;product=hypothetical protein;protein_id=TMQ40865.1;transl_table=11
LNKO01000027.1	Genbank	gene	5267	5497	.	+	.	ID=gene-AO052_02180;Name=AO052_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02180
LNKO01000027.1	Protein Homology	CDS	5267	5497	.	+	0	ID=cds-TMQ40866.1;Parent=gene-AO052_02180;Dbxref=NCBI_GP:TMQ40866.1;Name=TMQ40866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005616871.1;locus_tag=AO052_02180;product=hypothetical protein;protein_id=TMQ40866.1;transl_table=11
LNKO01000027.1	Genbank	gene	5501	5788	.	+	.	ID=gene-AO052_02185;Name=AO052_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02185
LNKO01000027.1	Protein Homology	CDS	5501	5788	.	+	0	ID=cds-TMQ40867.1;Parent=gene-AO052_02185;Dbxref=NCBI_GP:TMQ40867.1;Name=TMQ40867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668273.1;locus_tag=AO052_02185;product=hypothetical protein;protein_id=TMQ40867.1;transl_table=11
LNKO01000027.1	Genbank	gene	5898	6386	.	+	.	ID=gene-AO052_02190;Name=AO052_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02190
LNKO01000027.1	Protein Homology	CDS	5898	6386	.	+	0	ID=cds-TMQ40868.1;Parent=gene-AO052_02190;Dbxref=NCBI_GP:TMQ40868.1;Name=TMQ40868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658929.1;locus_tag=AO052_02190;product=hypothetical protein;protein_id=TMQ40868.1;transl_table=11
LNKO01000027.1	Genbank	pseudogene	6390	6557	.	+	.	ID=gene-AO052_02195;Name=AO052_02195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02195;pseudo=true
LNKO01000027.1	Protein Homology	CDS	6390	6557	.	+	0	ID=cds-AO052_02195;Parent=gene-AO052_02195;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658927.1;locus_tag=AO052_02195;pseudo=true;transl_table=11
##sequence-region LNKO01000028.1 1 12003
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000028.1	Genbank	region	1	12003	.	+	.	ID=LNKO01000028.1:1..12003;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000028.1	Genbank	pseudogene	1	146	.	+	.	ID=gene-AO052_02200;Name=AO052_02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02200;pseudo=true
LNKO01000028.1	Protein Homology	CDS	1	146	.	+	2	ID=cds-AO052_02200;Parent=gene-AO052_02200;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658927.1;locus_tag=AO052_02200;pseudo=true;transl_table=11
LNKO01000028.1	Genbank	gene	220	639	.	+	.	ID=gene-AO052_02205;Name=AO052_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02205
LNKO01000028.1	Protein Homology	CDS	220	639	.	+	0	ID=cds-TMQ40801.1;Parent=gene-AO052_02205;Dbxref=NCBI_GP:TMQ40801.1;Name=TMQ40801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533301.1;locus_tag=AO052_02205;product=hypothetical protein;protein_id=TMQ40801.1;transl_table=11
LNKO01000028.1	Genbank	gene	726	1262	.	+	.	ID=gene-AO052_02210;Name=AO052_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02210
LNKO01000028.1	Protein Homology	CDS	726	1262	.	+	0	ID=cds-TMQ40802.1;Parent=gene-AO052_02210;Dbxref=NCBI_GP:TMQ40802.1;Name=TMQ40802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661580.1;locus_tag=AO052_02210;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TMQ40802.1;transl_table=11
LNKO01000028.1	Genbank	gene	1502	1732	.	+	.	ID=gene-AO052_02215;Name=AO052_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02215
LNKO01000028.1	Protein Homology	CDS	1502	1732	.	+	0	ID=cds-TMQ40803.1;Parent=gene-AO052_02215;Dbxref=NCBI_GP:TMQ40803.1;Name=TMQ40803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658916.1;locus_tag=AO052_02215;product=hypothetical protein;protein_id=TMQ40803.1;transl_table=11
LNKO01000028.1	Protein Homology	pseudogene	1729	1985	.	+	.	ID=gene-AO052_02220;Name=AO052_02220;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02220;pseudo=true
LNKO01000028.1	Genbank	gene	2109	2417	.	+	.	ID=gene-AO052_02225;Name=AO052_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02225
LNKO01000028.1	Protein Homology	CDS	2109	2417	.	+	0	ID=cds-TMQ40804.1;Parent=gene-AO052_02225;Dbxref=NCBI_GP:TMQ40804.1;Name=TMQ40804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658911.1;locus_tag=AO052_02225;product=hypothetical protein;protein_id=TMQ40804.1;transl_table=11
LNKO01000028.1	Genbank	gene	2414	2716	.	+	.	ID=gene-AO052_02230;Name=AO052_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02230
LNKO01000028.1	Protein Homology	CDS	2414	2716	.	+	0	ID=cds-TMQ40805.1;Parent=gene-AO052_02230;Dbxref=NCBI_GP:TMQ40805.1;Name=TMQ40805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658909.1;locus_tag=AO052_02230;product=hypothetical protein;protein_id=TMQ40805.1;transl_table=11
LNKO01000028.1	Genbank	gene	2726	3274	.	+	.	ID=gene-AO052_02235;Name=AO052_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02235
LNKO01000028.1	Protein Homology	CDS	2726	3274	.	+	0	ID=cds-TMQ40806.1;Parent=gene-AO052_02235;Dbxref=NCBI_GP:TMQ40806.1;Name=TMQ40806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658907.1;locus_tag=AO052_02235;product=terminase;protein_id=TMQ40806.1;transl_table=11
LNKO01000028.1	Genbank	gene	3258	4580	.	+	.	ID=gene-AO052_02240;Name=AO052_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02240
LNKO01000028.1	Protein Homology	CDS	3258	4580	.	+	0	ID=cds-TMQ40807.1;Parent=gene-AO052_02240;Dbxref=NCBI_GP:TMQ40807.1;Name=TMQ40807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658905.1;locus_tag=AO052_02240;product=terminase;protein_id=TMQ40807.1;transl_table=11
LNKO01000028.1	Genbank	gene	4582	5997	.	+	.	ID=gene-AO052_02245;Name=AO052_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02245
LNKO01000028.1	Protein Homology	CDS	4582	5997	.	+	0	ID=cds-TMQ40808.1;Parent=gene-AO052_02245;Dbxref=NCBI_GP:TMQ40808.1;Name=TMQ40808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525659.1;locus_tag=AO052_02245;product=hypothetical protein;protein_id=TMQ40808.1;transl_table=11
LNKO01000028.1	Genbank	gene	5998	7275	.	+	.	ID=gene-AO052_02250;Name=AO052_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02250
LNKO01000028.1	Protein Homology	CDS	5998	7275	.	+	0	ID=cds-TMQ40809.1;Parent=gene-AO052_02250;Dbxref=NCBI_GP:TMQ40809.1;Name=TMQ40809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525658.1;locus_tag=AO052_02250;product=phage head morphogenesis protein;protein_id=TMQ40809.1;transl_table=11
LNKO01000028.1	Genbank	gene	7462	7650	.	+	.	ID=gene-AO052_02255;Name=AO052_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02255
LNKO01000028.1	Protein Homology	CDS	7462	7650	.	+	0	ID=cds-TMQ40810.1;Parent=gene-AO052_02255;Dbxref=NCBI_GP:TMQ40810.1;Name=TMQ40810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658899.1;locus_tag=AO052_02255;product=hypothetical protein;protein_id=TMQ40810.1;transl_table=11
LNKO01000028.1	Genbank	gene	7853	8353	.	+	.	ID=gene-AO052_02260;Name=AO052_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02260
LNKO01000028.1	Protein Homology	CDS	7853	8353	.	+	0	ID=cds-TMQ40811.1;Parent=gene-AO052_02260;Dbxref=NCBI_GP:TMQ40811.1;Name=TMQ40811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658896.1;locus_tag=AO052_02260;product=phage morphogenesis protein;protein_id=TMQ40811.1;transl_table=11
LNKO01000028.1	Genbank	gene	8596	9699	.	+	.	ID=gene-AO052_02265;Name=AO052_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02265
LNKO01000028.1	Protein Homology	CDS	8596	9699	.	+	0	ID=cds-TMQ40812.1;Parent=gene-AO052_02265;Dbxref=NCBI_GP:TMQ40812.1;Name=TMQ40812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658895.1;locus_tag=AO052_02265;product=peptidase;protein_id=TMQ40812.1;transl_table=11
LNKO01000028.1	Genbank	gene	9718	10644	.	+	.	ID=gene-AO052_02270;Name=AO052_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02270
LNKO01000028.1	Protein Homology	CDS	9718	10644	.	+	0	ID=cds-TMQ40813.1;Parent=gene-AO052_02270;Dbxref=NCBI_GP:TMQ40813.1;Name=TMQ40813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525656.1;locus_tag=AO052_02270;product=hypothetical protein;protein_id=TMQ40813.1;transl_table=11
LNKO01000028.1	Genbank	gene	10710	11027	.	+	.	ID=gene-AO052_02275;Name=AO052_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02275
LNKO01000028.1	Protein Homology	CDS	10710	11027	.	+	0	ID=cds-TMQ40814.1;Parent=gene-AO052_02275;Dbxref=NCBI_GP:TMQ40814.1;Name=TMQ40814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533211.1;locus_tag=AO052_02275;product=hypothetical protein;protein_id=TMQ40814.1;transl_table=11
LNKO01000028.1	Genbank	gene	11027	11461	.	+	.	ID=gene-AO052_02280;Name=AO052_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02280
LNKO01000028.1	Protein Homology	CDS	11027	11461	.	+	0	ID=cds-TMQ40815.1;Parent=gene-AO052_02280;Dbxref=NCBI_GP:TMQ40815.1;Name=TMQ40815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664066.1;locus_tag=AO052_02280;product=hypothetical protein;protein_id=TMQ40815.1;transl_table=11
LNKO01000028.1	Genbank	gene	11473	11970	.	+	.	ID=gene-AO052_02285;Name=AO052_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02285
LNKO01000028.1	Protein Homology	CDS	11473	11970	.	+	0	ID=cds-TMQ40816.1;Parent=gene-AO052_02285;Dbxref=NCBI_GP:TMQ40816.1;Name=TMQ40816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658884.1;locus_tag=AO052_02285;product=hypothetical protein;protein_id=TMQ40816.1;transl_table=11
##sequence-region LNKO01000029.1 1 8990
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000029.1	Genbank	region	1	8990	.	+	.	ID=LNKO01000029.1:1..8990;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000029.1	Genbank	gene	1	1361	.	+	.	ID=gene-AO052_02290;Name=AO052_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02290;partial=true;start_range=.,1
LNKO01000029.1	Protein Homology	CDS	1	1361	.	+	2	ID=cds-TMQ40738.1;Parent=gene-AO052_02290;Dbxref=NCBI_GP:TMQ40738.1;Name=TMQ40738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533214.1;locus_tag=AO052_02290;partial=true;product=phage tail protein;protein_id=TMQ40738.1;start_range=.,1;transl_table=11
LNKO01000029.1	Genbank	gene	1372	1890	.	+	.	ID=gene-AO052_02295;Name=AO052_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02295
LNKO01000029.1	Protein Homology	CDS	1372	1890	.	+	0	ID=cds-TMQ40739.1;Parent=gene-AO052_02295;Dbxref=NCBI_GP:TMQ40739.1;Name=TMQ40739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664074.1;locus_tag=AO052_02295;product=phage tail protein;protein_id=TMQ40739.1;transl_table=11
LNKO01000029.1	Genbank	gene	1984	2268	.	+	.	ID=gene-AO052_02300;Name=AO052_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02300
LNKO01000029.1	Protein Homology	CDS	1984	2268	.	+	0	ID=cds-TMQ40740.1;Parent=gene-AO052_02300;Dbxref=NCBI_GP:TMQ40740.1;Name=TMQ40740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640664.1;locus_tag=AO052_02300;product=hypothetical protein;protein_id=TMQ40740.1;transl_table=11
LNKO01000029.1	Genbank	gene	2383	2697	.	-	.	ID=gene-AO052_02305;Name=AO052_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02305
LNKO01000029.1	Protein Homology	CDS	2383	2697	.	-	0	ID=cds-TMQ40741.1;Parent=gene-AO052_02305;Dbxref=NCBI_GP:TMQ40741.1;Name=TMQ40741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640668.1;locus_tag=AO052_02305;product=hypothetical protein;protein_id=TMQ40741.1;transl_table=11
LNKO01000029.1	Genbank	gene	2743	5334	.	+	.	ID=gene-AO052_02310;Name=AO052_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02310
LNKO01000029.1	Protein Homology	CDS	2743	5334	.	+	0	ID=cds-TMQ40742.1;Parent=gene-AO052_02310;Dbxref=NCBI_GP:TMQ40742.1;Name=TMQ40742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525653.1;locus_tag=AO052_02310;product=phage tail tape measure protein;protein_id=TMQ40742.1;transl_table=11
LNKO01000029.1	Genbank	gene	5334	6266	.	+	.	ID=gene-AO052_02315;Name=AO052_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02315
LNKO01000029.1	Protein Homology	CDS	5334	6266	.	+	0	ID=cds-TMQ40743.1;Parent=gene-AO052_02315;Dbxref=NCBI_GP:TMQ40743.1;Name=TMQ40743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658868.1;locus_tag=AO052_02315;product=hypothetical protein;protein_id=TMQ40743.1;transl_table=11
LNKO01000029.1	Genbank	gene	6247	6477	.	+	.	ID=gene-AO052_02320;Name=AO052_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02320
LNKO01000029.1	Protein Homology	CDS	6247	6477	.	+	0	ID=cds-TMQ40744.1;Parent=gene-AO052_02320;Dbxref=NCBI_GP:TMQ40744.1;Name=TMQ40744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658865.1;locus_tag=AO052_02320;product=hypothetical protein;protein_id=TMQ40744.1;transl_table=11
LNKO01000029.1	Genbank	gene	6470	7534	.	+	.	ID=gene-AO052_02325;Name=AO052_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02325
LNKO01000029.1	Protein Homology	CDS	6470	7534	.	+	0	ID=cds-TMQ40745.1;Parent=gene-AO052_02325;Dbxref=NCBI_GP:TMQ40745.1;Name=TMQ40745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533314.1;locus_tag=AO052_02325;product=hypothetical protein;protein_id=TMQ40745.1;transl_table=11
LNKO01000029.1	Genbank	gene	7521	8129	.	+	.	ID=gene-AO052_02330;Name=AO052_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02330
LNKO01000029.1	Protein Homology	CDS	7521	8129	.	+	0	ID=cds-TMQ40746.1;Parent=gene-AO052_02330;Dbxref=NCBI_GP:TMQ40746.1;Name=TMQ40746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658861.1;locus_tag=AO052_02330;product=phage baseplate protein;protein_id=TMQ40746.1;transl_table=11
LNKO01000029.1	Genbank	gene	8184	8549	.	+	.	ID=gene-AO052_02335;Name=AO052_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02335
LNKO01000029.1	Protein Homology	CDS	8184	8549	.	+	0	ID=cds-TMQ40747.1;Parent=gene-AO052_02335;Dbxref=NCBI_GP:TMQ40747.1;Name=TMQ40747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525650.1;locus_tag=AO052_02335;product=phage baseplate protein;protein_id=TMQ40747.1;transl_table=11
LNKO01000029.1	Genbank	pseudogene	8549	8990	.	+	.	ID=gene-AO052_02340;Name=AO052_02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02340;pseudo=true
LNKO01000029.1	Protein Homology	CDS	8549	8990	.	+	0	ID=cds-AO052_02340;Parent=gene-AO052_02340;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658857.1;locus_tag=AO052_02340;pseudo=true;transl_table=11
##sequence-region LNKO01000030.1 1 2020
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000030.1	Genbank	region	1	2020	.	+	.	ID=LNKO01000030.1:1..2020;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000030.1	Genbank	pseudogene	1	662	.	+	.	ID=gene-AO052_02345;Name=AO052_02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02345;pseudo=true
LNKO01000030.1	Protein Homology	CDS	1	662	.	+	2	ID=cds-AO052_02345;Parent=gene-AO052_02345;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658857.1;locus_tag=AO052_02345;pseudo=true;transl_table=11
LNKO01000030.1	Genbank	gene	655	1224	.	+	.	ID=gene-AO052_02350;Name=AO052_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02350
LNKO01000030.1	Protein Homology	CDS	655	1224	.	+	0	ID=cds-TMQ40699.1;Parent=gene-AO052_02350;Dbxref=NCBI_GP:TMQ40699.1;Name=TMQ40699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658855.1;locus_tag=AO052_02350;product=phage tail protein;protein_id=TMQ40699.1;transl_table=11
LNKO01000030.1	Genbank	pseudogene	1256	2020	.	+	.	ID=gene-AO052_02355;Name=AO052_02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02355;pseudo=true
LNKO01000030.1	Protein Homology	CDS	1256	2020	.	+	0	ID=cds-AO052_02355;Parent=gene-AO052_02355;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525648.1;locus_tag=AO052_02355;pseudo=true;transl_table=11
##sequence-region LNKO01000031.1 1 4863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000031.1	Genbank	region	1	4863	.	+	.	ID=LNKO01000031.1:1..4863;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000031.1	Genbank	gene	373	636	.	-	.	ID=gene-AO052_02360;Name=AO052_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02360
LNKO01000031.1	Protein Homology	CDS	373	636	.	-	0	ID=cds-TMQ40692.1;Parent=gene-AO052_02360;Dbxref=NCBI_GP:TMQ40692.1;Name=TMQ40692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272529.1;locus_tag=AO052_02360;product=hypothetical protein;protein_id=TMQ40692.1;transl_table=11
LNKO01000031.1	Protein Homology	pseudogene	961	1717	.	-	.	ID=gene-AO052_02365;Name=rumB;Note=disrupted;description=23S rRNA methyltransferase;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=AO052_02365;pseudo=true
LNKO01000031.1	Genbank	gene	1710	2765	.	-	.	ID=gene-AO052_02370;Name=AO052_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02370
LNKO01000031.1	Protein Homology	CDS	1710	2765	.	-	0	ID=cds-TMQ40693.1;Parent=gene-AO052_02370;Dbxref=NCBI_GP:TMQ40693.1;Name=TMQ40693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44955.1;locus_tag=AO052_02370;product=beta-hexosaminidase;protein_id=TMQ40693.1;transl_table=11
LNKO01000031.1	Genbank	gene	2769	3119	.	-	.	ID=gene-AO052_02375;Name=AO052_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02375
LNKO01000031.1	Protein Homology	CDS	2769	3119	.	-	0	ID=cds-TMQ40694.1;Parent=gene-AO052_02375;Dbxref=NCBI_GP:TMQ40694.1;Name=TMQ40694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627387.1;locus_tag=AO052_02375;product=hypothetical protein;protein_id=TMQ40694.1;transl_table=11
LNKO01000031.1	Genbank	gene	3119	3469	.	-	.	ID=gene-AO052_02380;Name=AO052_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02380
LNKO01000031.1	Protein Homology	CDS	3119	3469	.	-	0	ID=cds-TMQ40695.1;Parent=gene-AO052_02380;Dbxref=NCBI_GP:TMQ40695.1;Name=TMQ40695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526149.1;locus_tag=AO052_02380;product=histidine triad nucleotide-binding protein;protein_id=TMQ40695.1;transl_table=11
LNKO01000031.1	Genbank	pseudogene	3587	4863	.	-	.	ID=gene-AO052_02385;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=pseudogene;locus_tag=AO052_02385;pseudo=true
LNKO01000031.1	Protein Homology	CDS	3587	4863	.	-	2	ID=cds-AO052_02385;Parent=gene-AO052_02385;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527270.1;locus_tag=AO052_02385;pseudo=true;transl_table=11
##sequence-region LNKO01000032.1 1 56204
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000032.1	Genbank	region	1	56204	.	+	.	ID=LNKO01000032.1:1..56204;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000032.1	Genbank	pseudogene	1	1549	.	-	.	ID=gene-AO052_02390;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=pseudogene;locus_tag=AO052_02390;pseudo=true
LNKO01000032.1	Protein Homology	CDS	1	1549	.	-	0	ID=cds-AO052_02390;Parent=gene-AO052_02390;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693310.1;locus_tag=AO052_02390;pseudo=true;transl_table=11
LNKO01000032.1	Genbank	gene	1578	2504	.	-	.	ID=gene-AO052_02395;Name=AO052_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02395
LNKO01000032.1	Protein Homology	CDS	1578	2504	.	-	0	ID=cds-TMQ40605.1;Parent=gene-AO052_02395;Dbxref=NCBI_GP:TMQ40605.1;Name=TMQ40605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527269.1;locus_tag=AO052_02395;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=TMQ40605.1;transl_table=11
LNKO01000032.1	Genbank	gene	2551	4125	.	-	.	ID=gene-AO052_02400;Name=AO052_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02400
LNKO01000032.1	Protein Homology	CDS	2551	4125	.	-	0	ID=cds-TMQ40606.1;Parent=gene-AO052_02400;Dbxref=NCBI_GP:TMQ40606.1;Name=TMQ40606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526146.1;locus_tag=AO052_02400;product=multidrug transporter MurJ;protein_id=TMQ40606.1;transl_table=11
LNKO01000032.1	Genbank	gene	4392	4655	.	+	.	ID=gene-AO052_02405;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AO052_02405
LNKO01000032.1	Protein Homology	CDS	4392	4655	.	+	0	ID=cds-TMQ40607.1;Parent=gene-AO052_02405;Dbxref=NCBI_GP:TMQ40607.1;Name=TMQ40607.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652704.1;locus_tag=AO052_02405;product=30S ribosomal protein S20;protein_id=TMQ40607.1;transl_table=11
LNKO01000032.1	Genbank	gene	4728	5294	.	-	.	ID=gene-AO052_02410;Name=AO052_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02410
LNKO01000032.1	Protein Homology	CDS	4728	5294	.	-	0	ID=cds-TMQ40608.1;Parent=gene-AO052_02410;Dbxref=NCBI_GP:TMQ40608.1;Name=TMQ40608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701969.1;locus_tag=AO052_02410;product=hypothetical protein;protein_id=TMQ40608.1;transl_table=11
LNKO01000032.1	Genbank	gene	5284	5424	.	+	.	ID=gene-AO052_02415;Name=AO052_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02415
LNKO01000032.1	Protein Homology	CDS	5284	5424	.	+	0	ID=cds-TMQ40648.1;Parent=gene-AO052_02415;Dbxref=NCBI_GP:TMQ40648.1;Name=TMQ40648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44086.1;locus_tag=AO052_02415;product=hypothetical protein;protein_id=TMQ40648.1;transl_table=11
LNKO01000032.1	Genbank	gene	5440	6297	.	+	.	ID=gene-AO052_02420;Name=AO052_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02420
LNKO01000032.1	Protein Homology	CDS	5440	6297	.	+	0	ID=cds-TMQ40609.1;Parent=gene-AO052_02420;Dbxref=NCBI_GP:TMQ40609.1;Name=TMQ40609.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44960.1;locus_tag=AO052_02420;product=2-ketocyclohexanecarboxyl-CoA hydrolase;protein_id=TMQ40609.1;transl_table=11
LNKO01000032.1	Genbank	gene	6366	7355	.	+	.	ID=gene-AO052_02425;Name=AO052_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02425
LNKO01000032.1	Protein Homology	CDS	6366	7355	.	+	0	ID=cds-TMQ40610.1;Parent=gene-AO052_02425;Dbxref=NCBI_GP:TMQ40610.1;Name=TMQ40610.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550990.1;locus_tag=AO052_02425;product=o-succinylbenzoate synthase;protein_id=TMQ40610.1;transl_table=11
LNKO01000032.1	Genbank	gene	7412	7861	.	+	.	ID=gene-AO052_02430;Name=AO052_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02430
LNKO01000032.1	Protein Homology	CDS	7412	7861	.	+	0	ID=cds-TMQ40611.1;Parent=gene-AO052_02430;Dbxref=NCBI_GP:TMQ40611.1;Name=TMQ40611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664194.1;locus_tag=AO052_02430;product=3-dehydroquinate dehydratase;protein_id=TMQ40611.1;transl_table=11
LNKO01000032.1	Genbank	gene	8014	8481	.	+	.	ID=gene-AO052_02435;Name=AO052_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02435
LNKO01000032.1	Protein Homology	CDS	8014	8481	.	+	0	ID=cds-TMQ40612.1;Parent=gene-AO052_02435;Dbxref=NCBI_GP:TMQ40612.1;Name=TMQ40612.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626697.1;locus_tag=AO052_02435;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=TMQ40612.1;transl_table=11
LNKO01000032.1	Genbank	gene	8658	10004	.	+	.	ID=gene-AO052_02440;Name=AO052_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02440
LNKO01000032.1	Protein Homology	CDS	8658	10004	.	+	0	ID=cds-TMQ40613.1;Parent=gene-AO052_02440;Dbxref=NCBI_GP:TMQ40613.1;Name=TMQ40613.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43873.1;locus_tag=AO052_02440;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=TMQ40613.1;transl_table=11
LNKO01000032.1	Genbank	gene	10209	10466	.	+	.	ID=gene-AO052_02445;Name=AO052_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02445
LNKO01000032.1	Protein Homology	CDS	10209	10466	.	+	0	ID=cds-TMQ40614.1;Parent=gene-AO052_02445;Dbxref=NCBI_GP:TMQ40614.1;Name=TMQ40614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630971.1;locus_tag=AO052_02445;product=hypothetical protein;protein_id=TMQ40614.1;transl_table=11
LNKO01000032.1	Genbank	gene	10463	11917	.	+	.	ID=gene-AO052_02450;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AO052_02450
LNKO01000032.1	Protein Homology	CDS	10463	11917	.	+	0	ID=cds-TMQ40615.1;Parent=gene-AO052_02450;Dbxref=NCBI_GP:TMQ40615.1;Name=TMQ40615.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44963.1;locus_tag=AO052_02450;product=sodium/pantothenate symporter;protein_id=TMQ40615.1;transl_table=11
LNKO01000032.1	Genbank	gene	12037	12909	.	+	.	ID=gene-AO052_02455;Name=AO052_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02455
LNKO01000032.1	Protein Homology	CDS	12037	12909	.	+	0	ID=cds-TMQ40616.1;Parent=gene-AO052_02455;Dbxref=NCBI_GP:TMQ40616.1;Name=TMQ40616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995622.1;locus_tag=AO052_02455;product=transporter;protein_id=TMQ40616.1;transl_table=11
LNKO01000032.1	Genbank	gene	12944	13828	.	+	.	ID=gene-AO052_02460;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AO052_02460
LNKO01000032.1	Protein Homology	CDS	12944	13828	.	+	0	ID=cds-TMQ40617.1;Parent=gene-AO052_02460;Dbxref=NCBI_GP:TMQ40617.1;Name=TMQ40617.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526139.1;locus_tag=AO052_02460;product=ribosomal protein L11 methyltransferase;protein_id=TMQ40617.1;transl_table=11
LNKO01000032.1	Genbank	gene	14149	14931	.	+	.	ID=gene-AO052_02465;Name=AO052_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02465
LNKO01000032.1	Protein Homology	CDS	14149	14931	.	+	0	ID=cds-TMQ40649.1;Parent=gene-AO052_02465;Dbxref=NCBI_GP:TMQ40649.1;Name=TMQ40649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527265.1;locus_tag=AO052_02465;product=hypothetical protein;protein_id=TMQ40649.1;transl_table=11
LNKO01000032.1	Genbank	gene	15079	16059	.	+	.	ID=gene-AO052_02470;Name=AO052_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02470
LNKO01000032.1	Protein Homology	CDS	15079	16059	.	+	0	ID=cds-TMQ40618.1;Parent=gene-AO052_02470;Dbxref=NCBI_GP:TMQ40618.1;Name=TMQ40618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272326.1;locus_tag=AO052_02470;product=tRNA-dihydrouridine synthase B;protein_id=TMQ40618.1;transl_table=11
LNKO01000032.1	Genbank	gene	16053	16352	.	+	.	ID=gene-AO052_02475;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AO052_02475
LNKO01000032.1	Protein Homology	CDS	16053	16352	.	+	0	ID=cds-TMQ40619.1;Parent=gene-AO052_02475;Dbxref=NCBI_GP:TMQ40619.1;Name=TMQ40619.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65V72.1;locus_tag=AO052_02475;product=Fis family transcriptional regulator;protein_id=TMQ40619.1;transl_table=11
LNKO01000032.1	Genbank	gene	16447	16932	.	-	.	ID=gene-AO052_02480;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AO052_02480
LNKO01000032.1	Protein Homology	CDS	16447	16932	.	-	0	ID=cds-TMQ40620.1;Parent=gene-AO052_02480;Dbxref=NCBI_GP:TMQ40620.1;Name=TMQ40620.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIC0.1;locus_tag=AO052_02480;product=SsrA-binding protein;protein_id=TMQ40620.1;transl_table=11
LNKO01000032.1	Genbank	gene	17171	18136	.	-	.	ID=gene-AO052_02485;Name=AO052_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02485
LNKO01000032.1	Protein Homology	CDS	17171	18136	.	-	0	ID=cds-TMQ40621.1;Parent=gene-AO052_02485;Dbxref=NCBI_GP:TMQ40621.1;Name=TMQ40621.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499809.1;locus_tag=AO052_02485;product=ATP-dependent 6-phosphofructokinase;protein_id=TMQ40621.1;transl_table=11
LNKO01000032.1	Genbank	gene	18232	18813	.	-	.	ID=gene-AO052_02490;Name=AO052_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02490
LNKO01000032.1	Protein Homology	CDS	18232	18813	.	-	0	ID=cds-TMQ40622.1;Parent=gene-AO052_02490;Dbxref=NCBI_GP:TMQ40622.1;Name=TMQ40622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651586.1;locus_tag=AO052_02490;product=hypothetical protein;protein_id=TMQ40622.1;transl_table=11
LNKO01000032.1	Genbank	gene	18806	19582	.	-	.	ID=gene-AO052_02495;Name=AO052_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02495
LNKO01000032.1	Protein Homology	CDS	18806	19582	.	-	0	ID=cds-TMQ40623.1;Parent=gene-AO052_02495;Dbxref=NCBI_GP:TMQ40623.1;Name=TMQ40623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIC3.1;locus_tag=AO052_02495;product=hypothetical protein;protein_id=TMQ40623.1;transl_table=11
LNKO01000032.1	Genbank	gene	19635	20756	.	-	.	ID=gene-AO052_02500;Name=AO052_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02500
LNKO01000032.1	Protein Homology	CDS	19635	20756	.	-	0	ID=cds-TMQ40624.1;Parent=gene-AO052_02500;Dbxref=NCBI_GP:TMQ40624.1;Name=TMQ40624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272330.1;locus_tag=AO052_02500;product=DNA processing protein DprA;protein_id=TMQ40624.1;transl_table=11
LNKO01000032.1	Genbank	gene	21313	22860	.	+	.	ID=gene-AO052_02505;Name=AO052_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02505
LNKO01000032.1	Protein Homology	CDS	21313	22860	.	+	0	ID=cds-TMQ40625.1;Parent=gene-AO052_02505;Dbxref=NCBI_GP:TMQ40625.1;Name=TMQ40625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655964.1;locus_tag=AO052_02505;product=2-isopropylmalate synthase;protein_id=TMQ40625.1;transl_table=11
LNKO01000032.1	Genbank	gene	22946	24022	.	+	.	ID=gene-AO052_02510;Name=AO052_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02510
LNKO01000032.1	Protein Homology	CDS	22946	24022	.	+	0	ID=cds-TMQ40626.1;Parent=gene-AO052_02510;Dbxref=NCBI_GP:TMQ40626.1;Name=TMQ40626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651593.1;locus_tag=AO052_02510;product=3-isopropylmalate dehydrogenase;protein_id=TMQ40626.1;transl_table=11
LNKO01000032.1	Genbank	gene	24198	25607	.	+	.	ID=gene-AO052_02515;Name=AO052_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02515
LNKO01000032.1	Protein Homology	CDS	24198	25607	.	+	0	ID=cds-TMQ40627.1;Parent=gene-AO052_02515;Dbxref=NCBI_GP:TMQ40627.1;Name=TMQ40627.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701986.1;locus_tag=AO052_02515;product=isopropylmalate isomerase;protein_id=TMQ40627.1;transl_table=11
LNKO01000032.1	Genbank	gene	25618	26220	.	+	.	ID=gene-AO052_02520;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AO052_02520
LNKO01000032.1	Protein Homology	CDS	25618	26220	.	+	0	ID=cds-TMQ40628.1;Parent=gene-AO052_02520;Dbxref=NCBI_GP:TMQ40628.1;Name=TMQ40628.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355432.1;locus_tag=AO052_02520;product=isopropylmalate isomerase;protein_id=TMQ40628.1;transl_table=11
LNKO01000032.1	Genbank	gene	26334	31628	.	-	.	ID=gene-AO052_02525;Name=AO052_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02525
LNKO01000032.1	Protein Homology	CDS	26334	31628	.	-	0	ID=cds-TMQ40629.1;Parent=gene-AO052_02525;Dbxref=NCBI_GP:TMQ40629.1;Name=TMQ40629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526130.1;locus_tag=AO052_02525;product=peptidase;protein_id=TMQ40629.1;transl_table=11
LNKO01000032.1	Genbank	gene	31870	32949	.	-	.	ID=gene-AO052_02530;Name=AO052_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02530
LNKO01000032.1	Protein Homology	CDS	31870	32949	.	-	0	ID=cds-TMQ40630.1;Parent=gene-AO052_02530;Dbxref=NCBI_GP:TMQ40630.1;Name=TMQ40630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665998.1;locus_tag=AO052_02530;product=DNA replication protein RecF;protein_id=TMQ40630.1;transl_table=11
LNKO01000032.1	Genbank	gene	32951	34051	.	-	.	ID=gene-AO052_02535;Name=AO052_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02535
LNKO01000032.1	Protein Homology	CDS	32951	34051	.	-	0	ID=cds-TMQ40631.1;Parent=gene-AO052_02535;Dbxref=NCBI_GP:TMQ40631.1;Name=TMQ40631.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995638.1;locus_tag=AO052_02535;product=DNA polymerase III subunit beta;protein_id=TMQ40631.1;transl_table=11
LNKO01000032.1	Genbank	gene	34064	35428	.	-	.	ID=gene-AO052_02540;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AO052_02540
LNKO01000032.1	Protein Homology	CDS	34064	35428	.	-	0	ID=cds-TMQ40632.1;Parent=gene-AO052_02540;Dbxref=NCBI_GP:TMQ40632.1;Name=TMQ40632.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055337.1;locus_tag=AO052_02540;product=chromosomal replication initiation protein;protein_id=TMQ40632.1;transl_table=11
LNKO01000032.1	Genbank	gene	35620	38349	.	-	.	ID=gene-AO052_02545;Name=AO052_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02545
LNKO01000032.1	Protein Homology	CDS	35620	38349	.	-	0	ID=cds-TMQ40633.1;Parent=gene-AO052_02545;Dbxref=NCBI_GP:TMQ40633.1;Name=TMQ40633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526127.1;locus_tag=AO052_02545;product=ligand-gated channel;protein_id=TMQ40633.1;transl_table=11
LNKO01000032.1	Genbank	gene	38363	40357	.	-	.	ID=gene-AO052_02550;Name=AO052_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02550
LNKO01000032.1	Protein Homology	CDS	38363	40357	.	-	0	ID=cds-TMQ40650.1;Parent=gene-AO052_02550;Dbxref=NCBI_GP:TMQ40650.1;Name=TMQ40650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526126.1;locus_tag=AO052_02550;product=transferrin-binding protein 2;protein_id=TMQ40650.1;transl_table=11
LNKO01000032.1	Genbank	gene	40454	41914	.	+	.	ID=gene-AO052_02555;Name=AO052_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02555
LNKO01000032.1	Protein Homology	CDS	40454	41914	.	+	0	ID=cds-TMQ40634.1;Parent=gene-AO052_02555;Dbxref=NCBI_GP:TMQ40634.1;Name=TMQ40634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690839.1;locus_tag=AO052_02555;product=chromosomal replication initiation protein;protein_id=TMQ40634.1;transl_table=11
LNKO01000032.1	Genbank	gene	42090	42224	.	+	.	ID=gene-AO052_02560;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AO052_02560
LNKO01000032.1	Protein Homology	CDS	42090	42224	.	+	0	ID=cds-TMQ40635.1;Parent=gene-AO052_02560;Dbxref=NCBI_GP:TMQ40635.1;Name=TMQ40635.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;inference=EXISTENCE: similar to AA sequence:SwissProt:P66245.1;locus_tag=AO052_02560;product=50S ribosomal protein L34;protein_id=TMQ40635.1;transl_table=11
LNKO01000032.1	Genbank	gene	42237	42596	.	+	.	ID=gene-AO052_02565;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AO052_02565
LNKO01000032.1	Protein Homology	CDS	42237	42596	.	+	0	ID=cds-TMQ40651.1;Parent=gene-AO052_02565;Dbxref=NCBI_GP:TMQ40651.1;Name=TMQ40651.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995643.1;locus_tag=AO052_02565;product=ribonuclease P protein component;protein_id=TMQ40651.1;transl_table=11
LNKO01000032.1	Genbank	gene	42560	42820	.	+	.	ID=gene-AO052_02570;Name=AO052_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02570
LNKO01000032.1	Protein Homology	CDS	42560	42820	.	+	0	ID=cds-TMQ40636.1;Parent=gene-AO052_02570;Dbxref=NCBI_GP:TMQ40636.1;Name=TMQ40636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44972.1;locus_tag=AO052_02570;product=membrane protein insertion efficiency factor YidD;protein_id=TMQ40636.1;transl_table=11
LNKO01000032.1	Genbank	gene	42820	44445	.	+	.	ID=gene-AO052_02575;Name=AO052_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02575
LNKO01000032.1	Protein Homology	CDS	42820	44445	.	+	0	ID=cds-TMQ40637.1;Parent=gene-AO052_02575;Dbxref=NCBI_GP:TMQ40637.1;Name=TMQ40637.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665985.1;locus_tag=AO052_02575;product=insertase;protein_id=TMQ40637.1;transl_table=11
LNKO01000032.1	Genbank	gene	44604	45962	.	+	.	ID=gene-AO052_02580;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=AO052_02580
LNKO01000032.1	Protein Homology	CDS	44604	45962	.	+	0	ID=cds-TMQ40638.1;Parent=gene-AO052_02580;Dbxref=NCBI_GP:TMQ40638.1;Name=TMQ40638.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527255.1;locus_tag=AO052_02580;product=tRNA modification GTPase TrmE;protein_id=TMQ40638.1;transl_table=11
LNKO01000032.1	Genbank	gene	46151	48019	.	+	.	ID=gene-AO052_02585;Name=AO052_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02585
LNKO01000032.1	Protein Homology	CDS	46151	48019	.	+	0	ID=cds-TMQ40639.1;Parent=gene-AO052_02585;Dbxref=NCBI_GP:TMQ40639.1;Name=TMQ40639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686282.1;locus_tag=AO052_02585;product=peptidylprolyl isomerase;protein_id=TMQ40639.1;transl_table=11
LNKO01000032.1	Genbank	gene	48107	49666	.	+	.	ID=gene-AO052_02590;Name=AO052_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02590
LNKO01000032.1	Protein Homology	CDS	48107	49666	.	+	0	ID=cds-TMQ40640.1;Parent=gene-AO052_02590;Dbxref=NCBI_GP:TMQ40640.1;Name=TMQ40640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526121.1;locus_tag=AO052_02590;product=phosphoethanolamine transferase;protein_id=TMQ40640.1;transl_table=11
LNKO01000032.1	Genbank	gene	49736	50251	.	+	.	ID=gene-AO052_02595;Name=AO052_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02595
LNKO01000032.1	Protein Homology	CDS	49736	50251	.	+	0	ID=cds-TMQ40641.1;Parent=gene-AO052_02595;Dbxref=NCBI_GP:TMQ40641.1;Name=TMQ40641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630989.1;locus_tag=AO052_02595;product=lipoprotein signal peptidase;protein_id=TMQ40641.1;transl_table=11
LNKO01000032.1	Genbank	gene	50248	51192	.	+	.	ID=gene-AO052_02600;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AO052_02600
LNKO01000032.1	Protein Homology	CDS	50248	51192	.	+	0	ID=cds-TMQ40642.1;Parent=gene-AO052_02600;Dbxref=NCBI_GP:TMQ40642.1;Name=TMQ40642.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLQ5.1;locus_tag=AO052_02600;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TMQ40642.1;transl_table=11
LNKO01000032.1	Genbank	gene	51361	51708	.	+	.	ID=gene-AO052_02605;Name=AO052_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02605
LNKO01000032.1	Protein Homology	CDS	51361	51708	.	+	0	ID=cds-TMQ40643.1;Parent=gene-AO052_02605;Dbxref=NCBI_GP:TMQ40643.1;Name=TMQ40643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669732.1;locus_tag=AO052_02605;product=competence protein ComE;protein_id=TMQ40643.1;transl_table=11
LNKO01000032.1	Genbank	gene	51955	52953	.	+	.	ID=gene-AO052_02610;Name=AO052_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02610
LNKO01000032.1	Protein Homology	CDS	51955	52953	.	+	0	ID=cds-TMQ40644.1;Parent=gene-AO052_02610;Dbxref=NCBI_GP:TMQ40644.1;Name=TMQ40644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995652.1;locus_tag=AO052_02610;product=thiamine ABC transporter substrate-binding protein;protein_id=TMQ40644.1;transl_table=11
LNKO01000032.1	Genbank	gene	52958	54574	.	+	.	ID=gene-AO052_02615;Name=AO052_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02615
LNKO01000032.1	Protein Homology	CDS	52958	54574	.	+	0	ID=cds-TMQ40645.1;Parent=gene-AO052_02615;Dbxref=NCBI_GP:TMQ40645.1;Name=TMQ40645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054528.1;locus_tag=AO052_02615;product=thiamine ABC transporter permease;protein_id=TMQ40645.1;transl_table=11
LNKO01000032.1	Genbank	gene	54558	55205	.	+	.	ID=gene-AO052_02620;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AO052_02620
LNKO01000032.1	Protein Homology	CDS	54558	55205	.	+	0	ID=cds-TMQ40646.1;Parent=gene-AO052_02620;Dbxref=NCBI_GP:TMQ40646.1;Name=TMQ40646.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690819.1;locus_tag=AO052_02620;product=thiamine ABC transporter ATP-binding protein;protein_id=TMQ40646.1;transl_table=11
LNKO01000032.1	Genbank	gene	55318	56204	.	+	.	ID=gene-AO052_02625;Name=AO052_02625;end_range=56204,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02625;partial=true
LNKO01000032.1	Protein Homology	CDS	55318	56204	.	+	0	ID=cds-TMQ40647.1;Parent=gene-AO052_02625;Dbxref=NCBI_GP:TMQ40647.1;Name=TMQ40647.1;end_range=56204,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526120.1;locus_tag=AO052_02625;partial=true;product=biotin synthase;protein_id=TMQ40647.1;transl_table=11
##sequence-region LNKO01000033.1 1 1554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000033.1	Genbank	region	1	1554	.	+	.	ID=LNKO01000033.1:1..1554;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000033.1	Genbank	gene	167	1554	.	-	.	ID=gene-AO052_02630;Name=AO052_02630;end_range=1554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02630;partial=true
LNKO01000033.1	Protein Homology	CDS	167	1554	.	-	2	ID=cds-TMQ40540.1;Parent=gene-AO052_02630;Dbxref=NCBI_GP:TMQ40540.1;Name=TMQ40540.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;end_range=1554,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702025.1;locus_tag=AO052_02630;partial=true;product=transketolase;protein_id=TMQ40540.1;transl_table=11
##sequence-region LNKO01000034.1 1 6674
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000034.1	Genbank	region	1	6674	.	+	.	ID=LNKO01000034.1:1..6674;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000034.1	Genbank	pseudogene	1	608	.	-	.	ID=gene-AO052_02635;Name=AO052_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02635;pseudo=true
LNKO01000034.1	Protein Homology	CDS	1	608	.	-	0	ID=cds-AO052_02635;Parent=gene-AO052_02635;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702025.1;locus_tag=AO052_02635;pseudo=true;transl_table=11
LNKO01000034.1	Genbank	gene	990	1934	.	+	.	ID=gene-AO052_02640;Name=AO052_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02640
LNKO01000034.1	Protein Homology	CDS	990	1934	.	+	0	ID=cds-TMQ40417.1;Parent=gene-AO052_02640;Dbxref=NCBI_GP:TMQ40417.1;Name=TMQ40417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500172.1;locus_tag=AO052_02640;product=phosphoserine phosphatase;protein_id=TMQ40417.1;transl_table=11
LNKO01000034.1	Genbank	gene	1952	2443	.	+	.	ID=gene-AO052_02645;Name=AO052_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02645
LNKO01000034.1	Protein Homology	CDS	1952	2443	.	+	0	ID=cds-TMQ40418.1;Parent=gene-AO052_02645;Dbxref=NCBI_GP:TMQ40418.1;Name=TMQ40418.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651339.1;locus_tag=AO052_02645;product=nucleotide-binding protein;protein_id=TMQ40418.1;transl_table=11
LNKO01000034.1	Genbank	gene	2739	3686	.	+	.	ID=gene-AO052_02650;Name=AO052_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02650
LNKO01000034.1	Protein Homology	CDS	2739	3686	.	+	0	ID=cds-TMQ40419.1;Parent=gene-AO052_02650;Dbxref=NCBI_GP:TMQ40419.1;Name=TMQ40419.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647825.1;locus_tag=AO052_02650;product=magnesium transporter CorA;protein_id=TMQ40419.1;transl_table=11
LNKO01000034.1	Genbank	gene	3686	4231	.	+	.	ID=gene-AO052_02655;Name=AO052_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02655
LNKO01000034.1	Protein Homology	CDS	3686	4231	.	+	0	ID=cds-TMQ40420.1;Parent=gene-AO052_02655;Dbxref=NCBI_GP:TMQ40420.1;Name=TMQ40420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702029.1;locus_tag=AO052_02655;product=hypothetical protein;protein_id=TMQ40420.1;transl_table=11
LNKO01000034.1	Genbank	gene	4412	5248	.	-	.	ID=gene-AO052_02660;Name=AO052_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02660
LNKO01000034.1	Protein Homology	CDS	4412	5248	.	-	0	ID=cds-TMQ40421.1;Parent=gene-AO052_02660;Dbxref=NCBI_GP:TMQ40421.1;Name=TMQ40421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686298.1;locus_tag=AO052_02660;product=class II glutamine amidotransferase;protein_id=TMQ40421.1;transl_table=11
LNKO01000034.1	Genbank	gene	5674	6674	.	+	.	ID=gene-AO052_02665;Name=AO052_02665;end_range=6674,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02665;partial=true
LNKO01000034.1	Protein Homology	CDS	5674	6674	.	+	0	ID=cds-TMQ40422.1;Parent=gene-AO052_02665;Dbxref=NCBI_GP:TMQ40422.1;Name=TMQ40422.1;end_range=6674,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647817.1;locus_tag=AO052_02665;partial=true;product=hypothetical protein;protein_id=TMQ40422.1;transl_table=11
##sequence-region LNKO01000035.1 1 14636
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000035.1	Genbank	region	1	14636	.	+	.	ID=LNKO01000035.1:1..14636;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000035.1	Genbank	pseudogene	1	202	.	+	.	ID=gene-AO052_02670;Name=AO052_02670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02670;pseudo=true
LNKO01000035.1	Protein Homology	CDS	1	202	.	+	1	ID=cds-AO052_02670;Parent=gene-AO052_02670;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644608.1;locus_tag=AO052_02670;pseudo=true;transl_table=11
LNKO01000035.1	Protein Homology	pseudogene	848	2841	.	-	.	ID=gene-AO052_02675;Name=AO052_02675;Note=disrupted;description=cytochrome C nitrite reductase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02675;pseudo=true
LNKO01000035.1	Genbank	pseudogene	2852	3322	.	-	.	ID=gene-AO052_02680;Name=AO052_02680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02680;pseudo=true
LNKO01000035.1	Protein Homology	CDS	2852	3322	.	-	0	ID=cds-AO052_02680;Parent=gene-AO052_02680;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656000.1;locus_tag=AO052_02680;pseudo=true;transl_table=11
LNKO01000035.1	Protein Homology	pseudogene	3678	4240	.	-	.	ID=gene-AO052_02685;Name=AO052_02685;Note=disrupted;description=methionine synthase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02685;pseudo=true
LNKO01000035.1	Genbank	gene	4237	4485	.	-	.	ID=gene-AO052_02690;Name=AO052_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02690
LNKO01000035.1	Protein Homology	CDS	4237	4485	.	-	0	ID=cds-TMQ40388.1;Parent=gene-AO052_02690;Dbxref=NCBI_GP:TMQ40388.1;Name=TMQ40388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659313.1;locus_tag=AO052_02690;product=methionine synthase;protein_id=TMQ40388.1;transl_table=11
LNKO01000035.1	Genbank	gene	4763	5263	.	-	.	ID=gene-AO052_02695;Name=AO052_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02695
LNKO01000035.1	Protein Homology	CDS	4763	5263	.	-	0	ID=cds-TMQ40389.1;Parent=gene-AO052_02695;Dbxref=NCBI_GP:TMQ40389.1;Name=TMQ40389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656004.1;locus_tag=AO052_02695;product=ferredoxin-type protein NapF;protein_id=TMQ40389.1;transl_table=11
LNKO01000035.1	Genbank	gene	5263	5874	.	-	.	ID=gene-AO052_02700;Name=AO052_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02700
LNKO01000035.1	Protein Homology	CDS	5263	5874	.	-	0	ID=cds-TMQ40390.1;Parent=gene-AO052_02700;Dbxref=NCBI_GP:TMQ40390.1;Name=TMQ40390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647795.1;locus_tag=AO052_02700;product=Tat proofreading chaperone DmsD;protein_id=TMQ40390.1;transl_table=11
LNKO01000035.1	Genbank	gene	5986	6825	.	-	.	ID=gene-AO052_02705;Name=AO052_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02705
LNKO01000035.1	Protein Homology	CDS	5986	6825	.	-	0	ID=cds-TMQ40391.1;Parent=gene-AO052_02705;Dbxref=NCBI_GP:TMQ40391.1;Name=TMQ40391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45002.1;locus_tag=AO052_02705;product=dimethyl sulfoxide reductase;protein_id=TMQ40391.1;transl_table=11
LNKO01000035.1	Genbank	gene	6827	7444	.	-	.	ID=gene-AO052_02710;Name=AO052_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02710
LNKO01000035.1	Protein Homology	CDS	6827	7444	.	-	0	ID=cds-TMQ40392.1;Parent=gene-AO052_02710;Dbxref=NCBI_GP:TMQ40392.1;Name=TMQ40392.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45003.1;locus_tag=AO052_02710;product=dimethyl sulfoxide reductase;protein_id=TMQ40392.1;transl_table=11
LNKO01000035.1	Genbank	gene	7455	9875	.	-	.	ID=gene-AO052_02715;Name=AO052_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02715
LNKO01000035.1	Protein Homology	CDS	7455	9875	.	-	0	ID=cds-TMQ40393.1;Parent=gene-AO052_02715;Dbxref=NCBI_GP:TMQ40393.1;Name=TMQ40393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651687.1;locus_tag=AO052_02715;product=dimethyl sulfoxide reductase;protein_id=TMQ40393.1;transl_table=11
LNKO01000035.1	Genbank	gene	10132	11241	.	+	.	ID=gene-AO052_02720;Name=AO052_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02720
LNKO01000035.1	Protein Homology	CDS	10132	11241	.	+	0	ID=cds-TMQ40394.1;Parent=gene-AO052_02720;Dbxref=NCBI_GP:TMQ40394.1;Name=TMQ40394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647785.1;locus_tag=AO052_02720;product=hypothetical protein;protein_id=TMQ40394.1;transl_table=11
LNKO01000035.1	Protein Homology	pseudogene	11216	11579	.	+	.	ID=gene-AO052_02725;Name=AO052_02725;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02725;pseudo=true
LNKO01000035.1	Genbank	gene	11588	11866	.	+	.	ID=gene-AO052_02730;Name=AO052_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02730
LNKO01000035.1	Protein Homology	CDS	11588	11866	.	+	0	ID=cds-TMQ40395.1;Parent=gene-AO052_02730;Dbxref=NCBI_GP:TMQ40395.1;Name=TMQ40395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996602.1;locus_tag=AO052_02730;product=hypothetical protein;protein_id=TMQ40395.1;transl_table=11
LNKO01000035.1	Genbank	gene	11991	13835	.	-	.	ID=gene-AO052_02735;Name=AO052_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02735
LNKO01000035.1	Protein Homology	CDS	11991	13835	.	-	0	ID=cds-TMQ40396.1;Parent=gene-AO052_02735;Dbxref=NCBI_GP:TMQ40396.1;Name=TMQ40396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996601.1;locus_tag=AO052_02735;product=multidrug ABC transporter ATP-binding protein;protein_id=TMQ40396.1;transl_table=11
LNKO01000035.1	Genbank	gene	13914	14636	.	-	.	ID=gene-AO052_02740;Name=AO052_02740;end_range=14636,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02740;partial=true
LNKO01000035.1	Protein Homology	CDS	13914	14636	.	-	0	ID=cds-TMQ40397.1;Parent=gene-AO052_02740;Dbxref=NCBI_GP:TMQ40397.1;Name=TMQ40397.1;end_range=14636,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45008.1;locus_tag=AO052_02740;partial=true;product=AraC family transcriptional regulator;protein_id=TMQ40397.1;transl_table=11
##sequence-region LNKO01000036.1 1 13822
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000036.1	Genbank	region	1	13822	.	+	.	ID=LNKO01000036.1:1..13822;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000036.1	Genbank	pseudogene	1	172	.	-	.	ID=gene-AO052_02745;Name=AO052_02745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02745;pseudo=true
LNKO01000036.1	Protein Homology	CDS	1	172	.	-	0	ID=cds-AO052_02745;Parent=gene-AO052_02745;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45008.1;locus_tag=AO052_02745;pseudo=true;transl_table=11
LNKO01000036.1	Genbank	gene	284	625	.	+	.	ID=gene-AO052_02750;Name=AO052_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02750
LNKO01000036.1	Protein Homology	CDS	284	625	.	+	0	ID=cds-TMQ40360.1;Parent=gene-AO052_02750;Dbxref=NCBI_GP:TMQ40360.1;Name=TMQ40360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57498.1;locus_tag=AO052_02750;product=hypothetical protein;protein_id=TMQ40360.1;transl_table=11
LNKO01000036.1	Genbank	gene	724	3498	.	-	.	ID=gene-AO052_02755;Name=AO052_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02755
LNKO01000036.1	Protein Homology	CDS	724	3498	.	-	0	ID=cds-TMQ40361.1;Parent=gene-AO052_02755;Dbxref=NCBI_GP:TMQ40361.1;Name=TMQ40361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688339.1;locus_tag=AO052_02755;product=type III restriction endonuclease subunit R;protein_id=TMQ40361.1;transl_table=11
LNKO01000036.1	Genbank	gene	3488	4909	.	-	.	ID=gene-AO052_02760;Name=AO052_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02760
LNKO01000036.1	Protein Homology	CDS	3488	4909	.	-	0	ID=cds-TMQ40371.1;Parent=gene-AO052_02760;Dbxref=NCBI_GP:TMQ40371.1;Name=TMQ40371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996595.1;locus_tag=AO052_02760;product=hypothetical protein;protein_id=TMQ40371.1;transl_table=11
LNKO01000036.1	Genbank	gene	5148	5627	.	-	.	ID=gene-AO052_02765;Name=AO052_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02765
LNKO01000036.1	Protein Homology	CDS	5148	5627	.	-	0	ID=cds-TMQ40362.1;Parent=gene-AO052_02765;Dbxref=NCBI_GP:TMQ40362.1;Name=TMQ40362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252278.1;locus_tag=AO052_02765;product=hypothetical protein;protein_id=TMQ40362.1;transl_table=11
LNKO01000036.1	Genbank	gene	5843	6436	.	-	.	ID=gene-AO052_02770;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AO052_02770
LNKO01000036.1	Protein Homology	CDS	5843	6436	.	-	0	ID=cds-TMQ40363.1;Parent=gene-AO052_02770;Dbxref=NCBI_GP:TMQ40363.1;Name=TMQ40363.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665922.1;locus_tag=AO052_02770;product=ribonuclease HII;protein_id=TMQ40363.1;transl_table=11
LNKO01000036.1	Genbank	gene	6429	7601	.	-	.	ID=gene-AO052_02775;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AO052_02775
LNKO01000036.1	Protein Homology	CDS	6429	7601	.	-	0	ID=cds-TMQ40364.1;Parent=gene-AO052_02775;Dbxref=NCBI_GP:TMQ40364.1;Name=TMQ40364.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526110.1;locus_tag=AO052_02775;product=lipid-A-disaccharide synthase;protein_id=TMQ40364.1;transl_table=11
LNKO01000036.1	Genbank	gene	7668	8456	.	-	.	ID=gene-AO052_02780;Name=AO052_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02780
LNKO01000036.1	Protein Homology	CDS	7668	8456	.	-	0	ID=cds-TMQ40365.1;Parent=gene-AO052_02780;Dbxref=NCBI_GP:TMQ40365.1;Name=TMQ40365.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669829.1;locus_tag=AO052_02780;product=UDP-N-acetylglucosamine O-acyltransferase;protein_id=TMQ40365.1;transl_table=11
LNKO01000036.1	Genbank	gene	8470	8874	.	-	.	ID=gene-AO052_02785;Name=AO052_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02785
LNKO01000036.1	Protein Homology	CDS	8470	8874	.	-	0	ID=cds-TMQ40372.1;Parent=gene-AO052_02785;Dbxref=NCBI_GP:TMQ40372.1;Name=TMQ40372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005685437.1;locus_tag=AO052_02785;product=beta-hydroxyacyl-ACP dehydratase;protein_id=TMQ40372.1;transl_table=11
LNKO01000036.1	Genbank	gene	9002	10561	.	-	.	ID=gene-AO052_02790;Name=AO052_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02790
LNKO01000036.1	Protein Homology	CDS	9002	10561	.	-	0	ID=cds-TMQ40366.1;Parent=gene-AO052_02790;Dbxref=NCBI_GP:TMQ40366.1;Name=TMQ40366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702043.1;locus_tag=AO052_02790;product=hypothetical protein;protein_id=TMQ40366.1;transl_table=11
LNKO01000036.1	Genbank	gene	10692	11405	.	+	.	ID=gene-AO052_02795;Name=AO052_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02795
LNKO01000036.1	Protein Homology	CDS	10692	11405	.	+	0	ID=cds-TMQ40367.1;Parent=gene-AO052_02795;Dbxref=NCBI_GP:TMQ40367.1;Name=TMQ40367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690774.1;locus_tag=AO052_02795;product=uridylate kinase;protein_id=TMQ40367.1;transl_table=11
LNKO01000036.1	Genbank	gene	11644	12609	.	-	.	ID=gene-AO052_02800;Name=AO052_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02800
LNKO01000036.1	Protein Homology	CDS	11644	12609	.	-	0	ID=cds-TMQ40368.1;Parent=gene-AO052_02800;Dbxref=NCBI_GP:TMQ40368.1;Name=TMQ40368.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272369.1;locus_tag=AO052_02800;product=nitrite reductase;protein_id=TMQ40368.1;transl_table=11
LNKO01000036.1	Genbank	gene	12606	13283	.	-	.	ID=gene-AO052_02805;Name=AO052_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02805
LNKO01000036.1	Protein Homology	CDS	12606	13283	.	-	0	ID=cds-TMQ40369.1;Parent=gene-AO052_02805;Dbxref=NCBI_GP:TMQ40369.1;Name=TMQ40369.1;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996588.1;locus_tag=AO052_02805;product=nitrite reductase;protein_id=TMQ40369.1;transl_table=11
LNKO01000036.1	Genbank	gene	13280	13822	.	-	.	ID=gene-AO052_02810;Name=AO052_02810;end_range=13822,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02810;partial=true
LNKO01000036.1	Protein Homology	CDS	13280	13822	.	-	0	ID=cds-TMQ40370.1;Parent=gene-AO052_02810;Dbxref=NCBI_GP:TMQ40370.1;Name=TMQ40370.1;end_range=13822,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690771.1;locus_tag=AO052_02810;partial=true;product=cysteine dioxygenase;protein_id=TMQ40370.1;transl_table=11
##sequence-region LNKO01000037.1 1 10896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000037.1	Genbank	region	1	10896	.	+	.	ID=LNKO01000037.1:1..10896;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000037.1	Genbank	pseudogene	1	108	.	-	.	ID=gene-AO052_02815;Name=AO052_02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02815;pseudo=true
LNKO01000037.1	Protein Homology	CDS	1	108	.	-	0	ID=cds-AO052_02815;Parent=gene-AO052_02815;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241503.1;locus_tag=AO052_02815;pseudo=true;transl_table=11
LNKO01000037.1	Genbank	gene	184	1710	.	-	.	ID=gene-AO052_02820;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AO052_02820
LNKO01000037.1	Protein Homology	CDS	184	1710	.	-	0	ID=cds-TMQ40349.1;Parent=gene-AO052_02820;Dbxref=NCBI_GP:TMQ40349.1;Name=TMQ40349.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659362.1;locus_tag=AO052_02820;product=cytochrome C nitrite reductase;protein_id=TMQ40349.1;transl_table=11
LNKO01000037.1	Genbank	gene	1962	5873	.	-	.	ID=gene-AO052_02825;Name=AO052_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02825
LNKO01000037.1	Protein Homology	CDS	1962	5873	.	-	0	ID=cds-TMQ40350.1;Parent=gene-AO052_02825;Dbxref=NCBI_GP:TMQ40350.1;Name=TMQ40350.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693395.1;locus_tag=AO052_02825;product=ATP-dependent RNA helicase HrpA;protein_id=TMQ40350.1;transl_table=11
LNKO01000037.1	Genbank	gene	5870	6244	.	-	.	ID=gene-AO052_02830;Name=AO052_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02830
LNKO01000037.1	Protein Homology	CDS	5870	6244	.	-	0	ID=cds-TMQ40351.1;Parent=gene-AO052_02830;Dbxref=NCBI_GP:TMQ40351.1;Name=TMQ40351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688327.1;locus_tag=AO052_02830;product=hypothetical protein;protein_id=TMQ40351.1;transl_table=11
LNKO01000037.1	Genbank	gene	6245	6697	.	-	.	ID=gene-AO052_02835;Name=AO052_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02835
LNKO01000037.1	Protein Homology	CDS	6245	6697	.	-	0	ID=cds-TMQ40352.1;Parent=gene-AO052_02835;Dbxref=NCBI_GP:TMQ40352.1;Name=TMQ40352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996583.1;locus_tag=AO052_02835;product=hypothetical protein;protein_id=TMQ40352.1;transl_table=11
LNKO01000037.1	Genbank	gene	6968	8104	.	-	.	ID=gene-AO052_02840;Name=AO052_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02840
LNKO01000037.1	Protein Homology	CDS	6968	8104	.	-	0	ID=cds-TMQ40353.1;Parent=gene-AO052_02840;Dbxref=NCBI_GP:TMQ40353.1;Name=TMQ40353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272373.1;locus_tag=AO052_02840;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=TMQ40353.1;transl_table=11
LNKO01000037.1	Genbank	gene	8119	9684	.	-	.	ID=gene-AO052_02845;Name=AO052_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02845
LNKO01000037.1	Protein Homology	CDS	8119	9684	.	-	0	ID=cds-TMQ40354.1;Parent=gene-AO052_02845;Dbxref=NCBI_GP:TMQ40354.1;Name=TMQ40354.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272374.1;locus_tag=AO052_02845;product=cytochrome d terminal oxidase subunit 1;protein_id=TMQ40354.1;transl_table=11
LNKO01000037.1	Genbank	gene	10129	10308	.	-	.	ID=gene-AO052_02850;Name=AO052_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02850
LNKO01000037.1	Protein Homology	CDS	10129	10308	.	-	0	ID=cds-TMQ40355.1;Parent=gene-AO052_02850;Dbxref=NCBI_GP:TMQ40355.1;Name=TMQ40355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688326.1;locus_tag=AO052_02850;product=hypothetical protein;protein_id=TMQ40355.1;transl_table=11
LNKO01000037.1	Genbank	pseudogene	10337	10896	.	+	.	ID=gene-AO052_02855;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=pseudogene;locus_tag=AO052_02855;pseudo=true
LNKO01000037.1	Protein Homology	CDS	10337	10896	.	+	0	ID=cds-AO052_02855;Parent=gene-AO052_02855;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLL2.1;locus_tag=AO052_02855;pseudo=true;transl_table=11
##sequence-region LNKO01000038.1 1 15478
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000038.1	Genbank	region	1	15478	.	+	.	ID=LNKO01000038.1:1..15478;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000038.1	Genbank	gene	1	1080	.	+	.	ID=gene-AO052_02860;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AO052_02860;partial=true;start_range=.,1
LNKO01000038.1	Protein Homology	CDS	1	1080	.	+	0	ID=cds-TMQ40315.1;Parent=gene-AO052_02860;Dbxref=NCBI_GP:TMQ40315.1;Name=TMQ40315.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLL2.1;locus_tag=AO052_02860;partial=true;product=CTP synthetase;protein_id=TMQ40315.1;start_range=.,1;transl_table=11
LNKO01000038.1	Genbank	gene	1225	1905	.	-	.	ID=gene-AO052_02865;Name=AO052_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02865
LNKO01000038.1	Protein Homology	CDS	1225	1905	.	-	0	ID=cds-TMQ40316.1;Parent=gene-AO052_02865;Dbxref=NCBI_GP:TMQ40316.1;Name=TMQ40316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690756.1;locus_tag=AO052_02865;product=nicotinamide riboside transporter pnuC;protein_id=TMQ40316.1;transl_table=11
LNKO01000038.1	Genbank	gene	2087	2854	.	-	.	ID=gene-AO052_02870;Name=AO052_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02870
LNKO01000038.1	Protein Homology	CDS	2087	2854	.	-	0	ID=cds-TMQ40317.1;Parent=gene-AO052_02870;Dbxref=NCBI_GP:TMQ40317.1;Name=TMQ40317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272376.1;locus_tag=AO052_02870;product=polar amino acid ABC transporter ATP-binding protein;protein_id=TMQ40317.1;transl_table=11
LNKO01000038.1	Genbank	gene	2864	3580	.	-	.	ID=gene-AO052_02875;Name=AO052_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02875
LNKO01000038.1	Protein Homology	CDS	2864	3580	.	-	0	ID=cds-TMQ40318.1;Parent=gene-AO052_02875;Dbxref=NCBI_GP:TMQ40318.1;Name=TMQ40318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633396.1;locus_tag=AO052_02875;product=cysteine ABC transporter permease;protein_id=TMQ40318.1;transl_table=11
LNKO01000038.1	Genbank	gene	3564	4337	.	-	.	ID=gene-AO052_02880;Name=AO052_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02880
LNKO01000038.1	Protein Homology	CDS	3564	4337	.	-	0	ID=cds-TMQ40319.1;Parent=gene-AO052_02880;Dbxref=NCBI_GP:TMQ40319.1;Name=TMQ40319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636846.1;locus_tag=AO052_02880;product=amino acid ABC transporter substrate-binding protein;protein_id=TMQ40319.1;transl_table=11
LNKO01000038.1	Genbank	gene	4638	5912	.	-	.	ID=gene-AO052_02885;Name=AO052_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02885
LNKO01000038.1	Protein Homology	CDS	4638	5912	.	-	0	ID=cds-TMQ40320.1;Parent=gene-AO052_02885;Dbxref=NCBI_GP:TMQ40320.1;Name=TMQ40320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIK7.1;locus_tag=AO052_02885;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMQ40320.1;transl_table=11
LNKO01000038.1	Genbank	gene	5923	6180	.	-	.	ID=gene-AO052_02890;Name=AO052_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02890
LNKO01000038.1	Protein Homology	CDS	5923	6180	.	-	0	ID=cds-TMQ40321.1;Parent=gene-AO052_02890;Dbxref=NCBI_GP:TMQ40321.1;Name=TMQ40321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647705.1;locus_tag=AO052_02890;product=hypothetical protein;protein_id=TMQ40321.1;transl_table=11
LNKO01000038.1	Genbank	gene	6201	6518	.	-	.	ID=gene-AO052_02895;Name=AO052_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02895
LNKO01000038.1	Protein Homology	CDS	6201	6518	.	-	0	ID=cds-TMQ40322.1;Parent=gene-AO052_02895;Dbxref=NCBI_GP:TMQ40322.1;Name=TMQ40322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651726.1;locus_tag=AO052_02895;product=hypothetical protein;protein_id=TMQ40322.1;transl_table=11
LNKO01000038.1	Genbank	gene	6529	7173	.	-	.	ID=gene-AO052_02900;Name=AO052_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02900
LNKO01000038.1	Protein Homology	CDS	6529	7173	.	-	0	ID=cds-TMQ40323.1;Parent=gene-AO052_02900;Dbxref=NCBI_GP:TMQ40323.1;Name=TMQ40323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272379.1;locus_tag=AO052_02900;product=hypothetical protein;protein_id=TMQ40323.1;transl_table=11
LNKO01000038.1	Genbank	gene	7206	7706	.	-	.	ID=gene-AO052_02905;Name=AO052_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02905
LNKO01000038.1	Protein Homology	CDS	7206	7706	.	-	0	ID=cds-TMQ40324.1;Parent=gene-AO052_02905;Dbxref=NCBI_GP:TMQ40324.1;Name=TMQ40324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656074.1;locus_tag=AO052_02905;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=TMQ40324.1;transl_table=11
LNKO01000038.1	Genbank	gene	7717	8502	.	-	.	ID=gene-AO052_02910;Name=AO052_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02910
LNKO01000038.1	Protein Homology	CDS	7717	8502	.	-	0	ID=cds-TMQ40325.1;Parent=gene-AO052_02910;Dbxref=NCBI_GP:TMQ40325.1;Name=TMQ40325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651728.1;locus_tag=AO052_02910;product=ABC transporter permease;protein_id=TMQ40325.1;transl_table=11
LNKO01000038.1	Genbank	gene	8499	9293	.	-	.	ID=gene-AO052_02915;Name=AO052_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02915
LNKO01000038.1	Protein Homology	CDS	8499	9293	.	-	0	ID=cds-TMQ40326.1;Parent=gene-AO052_02915;Dbxref=NCBI_GP:TMQ40326.1;Name=TMQ40326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628331.1;locus_tag=AO052_02915;product=ABC transporter ATP-binding protein;protein_id=TMQ40326.1;transl_table=11
LNKO01000038.1	Genbank	gene	9686	10333	.	-	.	ID=gene-AO052_02920;Name=AO052_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02920
LNKO01000038.1	Protein Homology	CDS	9686	10333	.	-	0	ID=cds-TMQ40327.1;Parent=gene-AO052_02920;Dbxref=NCBI_GP:TMQ40327.1;Name=TMQ40327.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996568.1;locus_tag=AO052_02920;product=superoxide dismutase;protein_id=TMQ40327.1;transl_table=11
LNKO01000038.1	Genbank	gene	10582	11220	.	+	.	ID=gene-AO052_02925;Name=AO052_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02925
LNKO01000038.1	Protein Homology	CDS	10582	11220	.	+	0	ID=cds-TMQ40328.1;Parent=gene-AO052_02925;Dbxref=NCBI_GP:TMQ40328.1;Name=TMQ40328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665896.1;locus_tag=AO052_02925;product=heme ABC transporter ATP-binding protein;protein_id=TMQ40328.1;transl_table=11
LNKO01000038.1	Genbank	gene	11225	11890	.	+	.	ID=gene-AO052_02930;Name=AO052_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02930
LNKO01000038.1	Protein Homology	CDS	11225	11890	.	+	0	ID=cds-TMQ40329.1;Parent=gene-AO052_02930;Dbxref=NCBI_GP:TMQ40329.1;Name=TMQ40329.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659389.1;locus_tag=AO052_02930;product=heme ABC transporter permease;protein_id=TMQ40329.1;transl_table=11
LNKO01000038.1	Genbank	gene	11951	12682	.	+	.	ID=gene-AO052_02935;Name=AO052_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02935
LNKO01000038.1	Protein Homology	CDS	11951	12682	.	+	0	ID=cds-TMQ40330.1;Parent=gene-AO052_02935;Dbxref=NCBI_GP:TMQ40330.1;Name=TMQ40330.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526091.1;locus_tag=AO052_02935;product=heme ABC transporter permease;protein_id=TMQ40330.1;transl_table=11
LNKO01000038.1	Genbank	gene	12730	12930	.	+	.	ID=gene-AO052_02940;Name=AO052_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02940
LNKO01000038.1	Protein Homology	CDS	12730	12930	.	+	0	ID=cds-TMQ40331.1;Parent=gene-AO052_02940;Dbxref=NCBI_GP:TMQ40331.1;Name=TMQ40331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651736.1;locus_tag=AO052_02940;product=hemagglutination activity protein;protein_id=TMQ40331.1;transl_table=11
LNKO01000038.1	Genbank	gene	12927	13448	.	+	.	ID=gene-AO052_02945;Name=AO052_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02945
LNKO01000038.1	Protein Homology	CDS	12927	13448	.	+	0	ID=cds-TMQ40332.1;Parent=gene-AO052_02945;Dbxref=NCBI_GP:TMQ40332.1;Name=TMQ40332.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647687.1;locus_tag=AO052_02945;product=cytochrome C biogenesis protein CcmE;protein_id=TMQ40332.1;transl_table=11
LNKO01000038.1	Genbank	gene	13445	15391	.	+	.	ID=gene-AO052_02950;Name=AO052_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02950
LNKO01000038.1	Protein Homology	CDS	13445	15391	.	+	0	ID=cds-TMQ40333.1;Parent=gene-AO052_02950;Dbxref=NCBI_GP:TMQ40333.1;Name=TMQ40333.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996562.1;locus_tag=AO052_02950;product=cytochrome C biogenesis protein CcmF;protein_id=TMQ40333.1;transl_table=11
##sequence-region LNKO01000039.1 1 5172
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000039.1	Genbank	region	1	5172	.	+	.	ID=LNKO01000039.1:1..5172;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000039.1	Genbank	gene	8	553	.	+	.	ID=gene-AO052_02955;Name=AO052_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02955
LNKO01000039.1	Protein Homology	CDS	8	553	.	+	0	ID=cds-TMQ40221.1;Parent=gene-AO052_02955;Dbxref=NCBI_GP:TMQ40221.1;Name=TMQ40221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634310.1;locus_tag=AO052_02955;product=thiol:disulfide interchange protein;protein_id=TMQ40221.1;transl_table=11
LNKO01000039.1	Genbank	gene	553	1014	.	+	.	ID=gene-AO052_02960;Name=AO052_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02960
LNKO01000039.1	Protein Homology	CDS	553	1014	.	+	0	ID=cds-TMQ40222.1;Parent=gene-AO052_02960;Dbxref=NCBI_GP:TMQ40222.1;Name=TMQ40222.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702057.1;locus_tag=AO052_02960;product=cytochrome C biogenesis protein;protein_id=TMQ40222.1;transl_table=11
LNKO01000039.1	Genbank	gene	1015	1932	.	+	.	ID=gene-AO052_02965;Name=AO052_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02965
LNKO01000039.1	Protein Homology	CDS	1015	1932	.	+	0	ID=cds-TMQ40223.1;Parent=gene-AO052_02965;Dbxref=NCBI_GP:TMQ40223.1;Name=TMQ40223.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550933.1;locus_tag=AO052_02965;product=c-type cytochrome biogenesis protein CcmI;protein_id=TMQ40223.1;transl_table=11
LNKO01000039.1	Genbank	gene	2053	2553	.	+	.	ID=gene-AO052_02970;Name=AO052_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02970
LNKO01000039.1	Protein Homology	CDS	2053	2553	.	+	0	ID=cds-TMQ40226.1;Parent=gene-AO052_02970;Dbxref=NCBI_GP:TMQ40226.1;Name=TMQ40226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526088.1;locus_tag=AO052_02970;product=hypothetical protein;protein_id=TMQ40226.1;transl_table=11
LNKO01000039.1	Genbank	gene	2564	2863	.	+	.	ID=gene-AO052_02975;Name=AO052_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02975
LNKO01000039.1	Protein Homology	CDS	2564	2863	.	+	0	ID=cds-TMQ40224.1;Parent=gene-AO052_02975;Dbxref=NCBI_GP:TMQ40224.1;Name=TMQ40224.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690731.1;locus_tag=AO052_02975;product=hypothetical protein;protein_id=TMQ40224.1;transl_table=11
LNKO01000039.1	Genbank	gene	2868	4880	.	-	.	ID=gene-AO052_02980;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AO052_02980
LNKO01000039.1	Protein Homology	CDS	2868	4880	.	-	0	ID=cds-TMQ40225.1;Parent=gene-AO052_02980;Dbxref=NCBI_GP:TMQ40225.1;Name=TMQ40225.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702059.1;locus_tag=AO052_02980;product=aromatic ring-opening dioxygenase LigA;protein_id=TMQ40225.1;transl_table=11
##sequence-region LNKO01000040.1 1 1467
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000040.1	Genbank	region	1	1467	.	+	.	ID=LNKO01000040.1:1..1467;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000040.1	Genbank	gene	1	803	.	-	.	ID=gene-AO052_02985;Name=AO052_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_02985;partial=true;start_range=.,1
LNKO01000040.1	Protein Homology	CDS	1	803	.	-	0	ID=cds-TMQ40208.1;Parent=gene-AO052_02985;Dbxref=NCBI_GP:TMQ40208.1;Name=TMQ40208.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UD03.1;locus_tag=AO052_02985;partial=true;product=cell division protein ZipA;protein_id=TMQ40208.1;start_range=.,1;transl_table=11
LNKO01000040.1	Genbank	pseudogene	956	1467	.	+	.	ID=gene-AO052_02990;Name=AO052_02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02990;pseudo=true
LNKO01000040.1	Protein Homology	CDS	956	1467	.	+	0	ID=cds-AO052_02990;Parent=gene-AO052_02990;Note=role in sulfur assimilation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLI8.1;locus_tag=AO052_02990;pseudo=true;transl_table=11
##sequence-region LNKO01000041.1 1 16981
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000041.1	Genbank	region	1	16981	.	+	.	ID=LNKO01000041.1:1..16981;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000041.1	Genbank	pseudogene	1	305	.	+	.	ID=gene-AO052_02995;Name=AO052_02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_02995;pseudo=true
LNKO01000041.1	Protein Homology	CDS	1	305	.	+	2	ID=cds-AO052_02995;Parent=gene-AO052_02995;Note=role in sulfur assimilation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651753.1;locus_tag=AO052_02995;pseudo=true;transl_table=11
LNKO01000041.1	Genbank	gene	404	1354	.	+	.	ID=gene-AO052_03000;Name=AO052_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03000
LNKO01000041.1	Protein Homology	CDS	404	1354	.	+	0	ID=cds-TMQ40190.1;Parent=gene-AO052_03000;Dbxref=NCBI_GP:TMQ40190.1;Name=TMQ40190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45040.1;locus_tag=AO052_03000;product=cysteine synthase;protein_id=TMQ40190.1;transl_table=11
LNKO01000041.1	Genbank	gene	1602	2825	.	+	.	ID=gene-AO052_03005;Name=AO052_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03005
LNKO01000041.1	Protein Homology	CDS	1602	2825	.	+	0	ID=cds-TMQ40191.1;Parent=gene-AO052_03005;Dbxref=NCBI_GP:TMQ40191.1;Name=TMQ40191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647660.1;locus_tag=AO052_03005;product=MFS transporter;protein_id=TMQ40191.1;transl_table=11
LNKO01000041.1	Genbank	gene	2934	3974	.	-	.	ID=gene-AO052_03010;Name=AO052_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03010
LNKO01000041.1	Protein Homology	CDS	2934	3974	.	-	0	ID=cds-TMQ40192.1;Parent=gene-AO052_03010;Dbxref=NCBI_GP:TMQ40192.1;Name=TMQ40192.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690719.1;locus_tag=AO052_03010;product=ADP-heptose--LPS heptosyltransferase;protein_id=TMQ40192.1;transl_table=11
LNKO01000041.1	Genbank	gene	4060	4986	.	-	.	ID=gene-AO052_03015;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AO052_03015
LNKO01000041.1	Protein Homology	CDS	4060	4986	.	-	0	ID=cds-TMQ40193.1;Parent=gene-AO052_03015;Dbxref=NCBI_GP:TMQ40193.1;Name=TMQ40193.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054491.1;locus_tag=AO052_03015;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=TMQ40193.1;transl_table=11
LNKO01000041.1	Genbank	gene	5039	5542	.	-	.	ID=gene-AO052_03020;Name=AO052_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03020
LNKO01000041.1	Protein Homology	CDS	5039	5542	.	-	0	ID=cds-TMQ40194.1;Parent=gene-AO052_03020;Dbxref=NCBI_GP:TMQ40194.1;Name=TMQ40194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643157.1;locus_tag=AO052_03020;product=thioredoxin;protein_id=TMQ40194.1;transl_table=11
LNKO01000041.1	Genbank	gene	5653	6324	.	+	.	ID=gene-AO052_03025;Name=AO052_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03025
LNKO01000041.1	Protein Homology	CDS	5653	6324	.	+	0	ID=cds-TMQ40195.1;Parent=gene-AO052_03025;Dbxref=NCBI_GP:TMQ40195.1;Name=TMQ40195.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY8.1;locus_tag=AO052_03025;product=2-deoxyribose-5-phosphate aldolase;protein_id=TMQ40195.1;transl_table=11
LNKO01000041.1	Genbank	gene	6358	7887	.	-	.	ID=gene-AO052_03030;Name=AO052_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03030
LNKO01000041.1	Protein Homology	CDS	6358	7887	.	-	0	ID=cds-TMQ40196.1;Parent=gene-AO052_03030;Dbxref=NCBI_GP:TMQ40196.1;Name=TMQ40196.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661812.1;locus_tag=AO052_03030;product=ATP-dependent protease;protein_id=TMQ40196.1;transl_table=11
LNKO01000041.1	Genbank	gene	8002	8619	.	-	.	ID=gene-AO052_03035;Name=AO052_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03035
LNKO01000041.1	Protein Homology	CDS	8002	8619	.	-	0	ID=cds-TMQ40197.1;Parent=gene-AO052_03035;Dbxref=NCBI_GP:TMQ40197.1;Name=TMQ40197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLH6.1;locus_tag=AO052_03035;product=GTP-binding protein;protein_id=TMQ40197.1;transl_table=11
LNKO01000041.1	Genbank	gene	8724	9590	.	+	.	ID=gene-AO052_03040;Name=AO052_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03040
LNKO01000041.1	Protein Homology	CDS	8724	9590	.	+	0	ID=cds-TMQ40198.1;Parent=gene-AO052_03040;Dbxref=NCBI_GP:TMQ40198.1;Name=TMQ40198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667527.1;locus_tag=AO052_03040;product=hypothetical protein;protein_id=TMQ40198.1;transl_table=11
LNKO01000041.1	Genbank	gene	9630	10628	.	-	.	ID=gene-AO052_03045;Name=AO052_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03045
LNKO01000041.1	Protein Homology	CDS	9630	10628	.	-	0	ID=cds-TMQ40199.1;Parent=gene-AO052_03045;Dbxref=NCBI_GP:TMQ40199.1;Name=TMQ40199.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700062.1;locus_tag=AO052_03045;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ40199.1;transl_table=11
LNKO01000041.1	Genbank	gene	10625	11596	.	-	.	ID=gene-AO052_03050;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AO052_03050
LNKO01000041.1	Protein Homology	CDS	10625	11596	.	-	0	ID=cds-TMQ40200.1;Parent=gene-AO052_03050;Dbxref=NCBI_GP:TMQ40200.1;Name=TMQ40200.1;gbkey=CDS;gene=oppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526077.1;locus_tag=AO052_03050;product=oligopeptide transporter ATP-binding component;protein_id=TMQ40200.1;transl_table=11
LNKO01000041.1	Genbank	gene	11606	12541	.	-	.	ID=gene-AO052_03055;Name=AO052_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03055
LNKO01000041.1	Protein Homology	CDS	11606	12541	.	-	0	ID=cds-TMQ40201.1;Parent=gene-AO052_03055;Dbxref=NCBI_GP:TMQ40201.1;Name=TMQ40201.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272393.1;locus_tag=AO052_03055;product=peptide ABC transporter permease;protein_id=TMQ40201.1;transl_table=11
LNKO01000041.1	Genbank	gene	12551	13471	.	-	.	ID=gene-AO052_03060;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AO052_03060
LNKO01000041.1	Protein Homology	CDS	12551	13471	.	-	0	ID=cds-TMQ40202.1;Parent=gene-AO052_03060;Dbxref=NCBI_GP:TMQ40202.1;Name=TMQ40202.1;gbkey=CDS;gene=oppB;inference=EXISTENCE: similar to AA sequence:SwissProt:P45054.1;locus_tag=AO052_03060;product=oligopeptide transporter permease;protein_id=TMQ40202.1;transl_table=11
LNKO01000041.1	Genbank	gene	13552	15177	.	-	.	ID=gene-AO052_03065;Name=AO052_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03065
LNKO01000041.1	Protein Homology	CDS	13552	15177	.	-	0	ID=cds-TMQ40203.1;Parent=gene-AO052_03065;Dbxref=NCBI_GP:TMQ40203.1;Name=TMQ40203.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054489.1;locus_tag=AO052_03065;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ40203.1;transl_table=11
LNKO01000041.1	Genbank	gene	15473	16426	.	+	.	ID=gene-AO052_03070;Name=AO052_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03070
LNKO01000041.1	Protein Homology	CDS	15473	16426	.	+	0	ID=cds-TMQ40204.1;Parent=gene-AO052_03070;Dbxref=NCBI_GP:TMQ40204.1;Name=TMQ40204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY0.1;locus_tag=AO052_03070;product=transaldolase;protein_id=TMQ40204.1;transl_table=11
##sequence-region LNKO01000042.1 1 12853
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000042.1	Genbank	region	1	12853	.	+	.	ID=LNKO01000042.1:1..12853;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000042.1	Genbank	gene	97	327	.	-	.	ID=gene-AO052_03075;Name=AO052_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03075
LNKO01000042.1	Protein Homology	CDS	97	327	.	-	0	ID=cds-TMQ40166.1;Parent=gene-AO052_03075;Dbxref=NCBI_GP:TMQ40166.1;Name=TMQ40166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44114.1;locus_tag=AO052_03075;product=hypothetical protein;protein_id=TMQ40166.1;transl_table=11
LNKO01000042.1	Genbank	gene	524	2110	.	+	.	ID=gene-AO052_03080;Name=AO052_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03080
LNKO01000042.1	Protein Homology	CDS	524	2110	.	+	0	ID=cds-TMQ40167.1;Parent=gene-AO052_03080;Dbxref=NCBI_GP:TMQ40167.1;Name=TMQ40167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667512.1;locus_tag=AO052_03080;product=carbon starvation protein CstA;protein_id=TMQ40167.1;transl_table=11
LNKO01000042.1	Genbank	gene	2312	2767	.	+	.	ID=gene-AO052_03085;Name=AO052_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03085
LNKO01000042.1	Protein Homology	CDS	2312	2767	.	+	0	ID=cds-TMQ40168.1;Parent=gene-AO052_03085;Dbxref=NCBI_GP:TMQ40168.1;Name=TMQ40168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550931.1;locus_tag=AO052_03085;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=TMQ40168.1;transl_table=11
LNKO01000042.1	Genbank	gene	2798	3763	.	+	.	ID=gene-AO052_03090;Name=AO052_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03090
LNKO01000042.1	Protein Homology	CDS	2798	3763	.	+	0	ID=cds-TMQ40169.1;Parent=gene-AO052_03090;Dbxref=NCBI_GP:TMQ40169.1;Name=TMQ40169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657267.1;locus_tag=AO052_03090;product=ribosomal RNA small subunit methyltransferase H;protein_id=TMQ40169.1;transl_table=11
LNKO01000042.1	Genbank	gene	3766	4089	.	+	.	ID=gene-AO052_03095;Name=AO052_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03095
LNKO01000042.1	Protein Homology	CDS	3766	4089	.	+	0	ID=cds-TMQ40170.1;Parent=gene-AO052_03095;Dbxref=NCBI_GP:TMQ40170.1;Name=TMQ40170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661296.1;locus_tag=AO052_03095;product=cell division protein FtsL;protein_id=TMQ40170.1;transl_table=11
LNKO01000042.1	Genbank	gene	4102	5934	.	+	.	ID=gene-AO052_03100;Name=AO052_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03100
LNKO01000042.1	Protein Homology	CDS	4102	5934	.	+	0	ID=cds-TMQ40171.1;Parent=gene-AO052_03100;Dbxref=NCBI_GP:TMQ40171.1;Name=TMQ40171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527834.1;locus_tag=AO052_03100;product=peptidoglycan synthase;protein_id=TMQ40171.1;transl_table=11
LNKO01000042.1	Genbank	gene	5944	7410	.	+	.	ID=gene-AO052_03105;Name=AO052_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03105
LNKO01000042.1	Protein Homology	CDS	5944	7410	.	+	0	ID=cds-TMQ40172.1;Parent=gene-AO052_03105;Dbxref=NCBI_GP:TMQ40172.1;Name=TMQ40172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637657.1;locus_tag=AO052_03105;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TMQ40172.1;transl_table=11
LNKO01000042.1	Genbank	gene	7424	8797	.	+	.	ID=gene-AO052_03110;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AO052_03110
LNKO01000042.1	Protein Homology	CDS	7424	8797	.	+	0	ID=cds-TMQ40173.1;Parent=gene-AO052_03110;Dbxref=NCBI_GP:TMQ40173.1;Name=TMQ40173.1;gbkey=CDS;gene=murF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628286.1;locus_tag=AO052_03110;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TMQ40173.1;transl_table=11
LNKO01000042.1	Genbank	gene	8791	9873	.	+	.	ID=gene-AO052_03115;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AO052_03115
LNKO01000042.1	Protein Homology	CDS	8791	9873	.	+	0	ID=cds-TMQ40174.1;Parent=gene-AO052_03115;Dbxref=NCBI_GP:TMQ40174.1;Name=TMQ40174.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLG1.1;locus_tag=AO052_03115;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=TMQ40174.1;transl_table=11
LNKO01000042.1	Genbank	gene	9997	11310	.	+	.	ID=gene-AO052_03120;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AO052_03120
LNKO01000042.1	Protein Homology	CDS	9997	11310	.	+	0	ID=cds-TMQ40175.1;Parent=gene-AO052_03120;Dbxref=NCBI_GP:TMQ40175.1;Name=TMQ40175.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526069.1;locus_tag=AO052_03120;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=TMQ40175.1;transl_table=11
LNKO01000042.1	Genbank	gene	11332	12516	.	+	.	ID=gene-AO052_03125;Name=AO052_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03125
LNKO01000042.1	Protein Homology	CDS	11332	12516	.	+	0	ID=cds-TMQ40176.1;Parent=gene-AO052_03125;Dbxref=NCBI_GP:TMQ40176.1;Name=TMQ40176.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527831.1;locus_tag=AO052_03125;product=cell division protein FtsW;protein_id=TMQ40176.1;transl_table=11
LNKO01000042.1	Genbank	pseudogene	12528	12853	.	+	.	ID=gene-AO052_03130;Name=AO052_03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03130;pseudo=true
LNKO01000042.1	Protein Homology	CDS	12528	12853	.	+	0	ID=cds-AO052_03130;Parent=gene-AO052_03130;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651827.1;locus_tag=AO052_03130;pseudo=true;transl_table=11
##sequence-region LNKO01000043.1 1 45143
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000043.1	Genbank	region	1	45143	.	+	.	ID=LNKO01000043.1:1..45143;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000043.1	Genbank	gene	1	728	.	+	.	ID=gene-AO052_03135;Name=AO052_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03135;partial=true;start_range=.,1
LNKO01000043.1	Protein Homology	CDS	1	728	.	+	2	ID=cds-TMQ40100.1;Parent=gene-AO052_03135;Dbxref=NCBI_GP:TMQ40100.1;Name=TMQ40100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996533.1;locus_tag=AO052_03135;partial=true;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=TMQ40100.1;start_range=.,1;transl_table=11
LNKO01000043.1	Genbank	gene	866	2293	.	+	.	ID=gene-AO052_03140;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AO052_03140
LNKO01000043.1	Protein Homology	CDS	866	2293	.	+	0	ID=cds-TMQ40101.1;Parent=gene-AO052_03140;Dbxref=NCBI_GP:TMQ40101.1;Name=TMQ40101.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527829.1;locus_tag=AO052_03140;product=UDP-N-acetylmuramate--alanine ligase;protein_id=TMQ40101.1;transl_table=11
LNKO01000043.1	Genbank	gene	2365	3285	.	+	.	ID=gene-AO052_03145;Name=AO052_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03145
LNKO01000043.1	Protein Homology	CDS	2365	3285	.	+	0	ID=cds-TMQ40102.1;Parent=gene-AO052_03145;Dbxref=NCBI_GP:TMQ40102.1;Name=TMQ40102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44405.1;locus_tag=AO052_03145;product=D-alanine--D-alanine ligase;protein_id=TMQ40102.1;transl_table=11
LNKO01000043.1	Genbank	gene	3285	4049	.	+	.	ID=gene-AO052_03150;Name=AO052_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03150
LNKO01000043.1	Protein Homology	CDS	3285	4049	.	+	0	ID=cds-TMQ40103.1;Parent=gene-AO052_03150;Dbxref=NCBI_GP:TMQ40103.1;Name=TMQ40103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527827.1;locus_tag=AO052_03150;product=cell division protein FtsQ;protein_id=TMQ40103.1;transl_table=11
LNKO01000043.1	Genbank	gene	4068	5345	.	+	.	ID=gene-AO052_03155;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AO052_03155
LNKO01000043.1	Protein Homology	CDS	4068	5345	.	+	0	ID=cds-TMQ40104.1;Parent=gene-AO052_03155;Dbxref=NCBI_GP:TMQ40104.1;Name=TMQ40104.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651835.1;locus_tag=AO052_03155;product=cell division protein FtsA;protein_id=TMQ40104.1;transl_table=11
LNKO01000043.1	Genbank	gene	5429	6694	.	+	.	ID=gene-AO052_03160;Name=AO052_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03160
LNKO01000043.1	Protein Homology	CDS	5429	6694	.	+	0	ID=cds-TMQ40105.1;Parent=gene-AO052_03160;Dbxref=NCBI_GP:TMQ40105.1;Name=TMQ40105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526064.1;locus_tag=AO052_03160;product=cell division protein FtsZ;protein_id=TMQ40105.1;transl_table=11
LNKO01000043.1	Genbank	gene	6733	7650	.	+	.	ID=gene-AO052_03165;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AO052_03165
LNKO01000043.1	Protein Homology	CDS	6733	7650	.	+	0	ID=cds-TMQ40106.1;Parent=gene-AO052_03165;Dbxref=NCBI_GP:TMQ40106.1;Name=TMQ40106.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPA5.1;locus_tag=AO052_03165;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=TMQ40106.1;transl_table=11
LNKO01000043.1	Genbank	gene	7777	8934	.	+	.	ID=gene-AO052_03170;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AO052_03170
LNKO01000043.1	Protein Homology	CDS	7777	8934	.	+	0	ID=cds-TMQ40107.1;Parent=gene-AO052_03170;Dbxref=NCBI_GP:TMQ40107.1;Name=TMQ40107.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550927.1;locus_tag=AO052_03170;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=TMQ40107.1;transl_table=11
LNKO01000043.1	Genbank	gene	8979	9836	.	-	.	ID=gene-AO052_03175;Name=AO052_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03175
LNKO01000043.1	Protein Homology	CDS	8979	9836	.	-	0	ID=cds-TMQ40108.1;Parent=gene-AO052_03175;Dbxref=NCBI_GP:TMQ40108.1;Name=TMQ40108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527823.1;locus_tag=AO052_03175;product=glmZ(sRNA)-inactivating NTPase;protein_id=TMQ40108.1;transl_table=11
LNKO01000043.1	Genbank	gene	9854	10348	.	-	.	ID=gene-AO052_03180;Name=AO052_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03180
LNKO01000043.1	Protein Homology	CDS	9854	10348	.	-	0	ID=cds-TMQ40109.1;Parent=gene-AO052_03180;Dbxref=NCBI_GP:TMQ40109.1;Name=TMQ40109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657238.1;locus_tag=AO052_03180;product=phosphotransferase;protein_id=TMQ40109.1;transl_table=11
LNKO01000043.1	Genbank	gene	10351	11076	.	-	.	ID=gene-AO052_03185;Name=AO052_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03185
LNKO01000043.1	Protein Homology	CDS	10351	11076	.	-	0	ID=cds-TMQ40110.1;Parent=gene-AO052_03185;Dbxref=NCBI_GP:TMQ40110.1;Name=TMQ40110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45073.1;locus_tag=AO052_03185;product=LPS export ABC transporter ATP-binding protein;protein_id=TMQ40110.1;transl_table=11
LNKO01000043.1	Genbank	gene	11080	11598	.	-	.	ID=gene-AO052_03190;Name=AO052_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03190
LNKO01000043.1	Protein Homology	CDS	11080	11598	.	-	0	ID=cds-TMQ40111.1;Parent=gene-AO052_03190;Dbxref=NCBI_GP:TMQ40111.1;Name=TMQ40111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45074.1;locus_tag=AO052_03190;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=TMQ40111.1;transl_table=11
LNKO01000043.1	Genbank	gene	11579	12187	.	-	.	ID=gene-AO052_03195;Name=AO052_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03195
LNKO01000043.1	Protein Homology	CDS	11579	12187	.	-	0	ID=cds-TMQ40112.1;Parent=gene-AO052_03195;Dbxref=NCBI_GP:TMQ40112.1;Name=TMQ40112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630377.1;locus_tag=AO052_03195;product=LPS export ABC transporter periplasmic protein LptC;protein_id=TMQ40112.1;transl_table=11
LNKO01000043.1	Genbank	gene	12238	12774	.	-	.	ID=gene-AO052_03200;Name=AO052_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03200
LNKO01000043.1	Protein Homology	CDS	12238	12774	.	-	0	ID=cds-TMQ40113.1;Parent=gene-AO052_03200;Dbxref=NCBI_GP:TMQ40113.1;Name=TMQ40113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702084.1;locus_tag=AO052_03200;product=hypothetical protein;protein_id=TMQ40113.1;transl_table=11
LNKO01000043.1	Genbank	gene	12863	14218	.	+	.	ID=gene-AO052_03205;Name=AO052_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03205
LNKO01000043.1	Protein Homology	CDS	12863	14218	.	+	0	ID=cds-TMQ40114.1;Parent=gene-AO052_03205;Dbxref=NCBI_GP:TMQ40114.1;Name=TMQ40114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45077.1;locus_tag=AO052_03205;product=protein PmbA;protein_id=TMQ40114.1;transl_table=11
LNKO01000043.1	Genbank	gene	14487	15137	.	-	.	ID=gene-AO052_03210;Name=AO052_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03210
LNKO01000043.1	Protein Homology	CDS	14487	15137	.	-	0	ID=cds-TMQ40115.1;Parent=gene-AO052_03210;Dbxref=NCBI_GP:TMQ40115.1;Name=TMQ40115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525980.1;locus_tag=AO052_03210;product=fimbrial protein;protein_id=TMQ40115.1;transl_table=11
LNKO01000043.1	Genbank	gene	15608	16306	.	+	.	ID=gene-AO052_03215;Name=AO052_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03215
LNKO01000043.1	Protein Homology	CDS	15608	16306	.	+	0	ID=cds-TMQ40116.1;Parent=gene-AO052_03215;Dbxref=NCBI_GP:TMQ40116.1;Name=TMQ40116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525979.1;locus_tag=AO052_03215;product=molecular chaperone;protein_id=TMQ40116.1;transl_table=11
LNKO01000043.1	Genbank	gene	16436	18949	.	+	.	ID=gene-AO052_03220;Name=AO052_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03220
LNKO01000043.1	Protein Homology	CDS	16436	18949	.	+	0	ID=cds-TMQ40117.1;Parent=gene-AO052_03220;Dbxref=NCBI_GP:TMQ40117.1;Name=TMQ40117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527766.1;locus_tag=AO052_03220;product=usher protein;protein_id=TMQ40117.1;transl_table=11
LNKO01000043.1	Genbank	gene	18963	19628	.	+	.	ID=gene-AO052_03225;Name=AO052_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03225
LNKO01000043.1	Protein Homology	CDS	18963	19628	.	+	0	ID=cds-TMQ40118.1;Parent=gene-AO052_03225;Dbxref=NCBI_GP:TMQ40118.1;Name=TMQ40118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525977.1;locus_tag=AO052_03225;product=fimbrial protein;protein_id=TMQ40118.1;transl_table=11
LNKO01000043.1	Genbank	gene	19652	20944	.	+	.	ID=gene-AO052_03230;Name=AO052_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03230
LNKO01000043.1	Protein Homology	CDS	19652	20944	.	+	0	ID=cds-TMQ40119.1;Parent=gene-AO052_03230;Dbxref=NCBI_GP:TMQ40119.1;Name=TMQ40119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525976.1;locus_tag=AO052_03230;product=pilus assembly protein PilC;protein_id=TMQ40119.1;transl_table=11
LNKO01000043.1	Genbank	gene	21291	23900	.	+	.	ID=gene-AO052_03235;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AO052_03235
LNKO01000043.1	Protein Homology	CDS	21291	23900	.	+	0	ID=cds-TMQ40120.1;Parent=gene-AO052_03235;Dbxref=NCBI_GP:TMQ40120.1;Name=TMQ40120.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702431.1;locus_tag=AO052_03235;product=aminopeptidase N;protein_id=TMQ40120.1;transl_table=11
LNKO01000043.1	Genbank	gene	23972	24586	.	-	.	ID=gene-AO052_03240;Name=AO052_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03240
LNKO01000043.1	Protein Homology	CDS	23972	24586	.	-	0	ID=cds-TMQ40121.1;Parent=gene-AO052_03240;Dbxref=NCBI_GP:TMQ40121.1;Name=TMQ40121.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525974.1;locus_tag=AO052_03240;product=riboflavin synthase subunit alpha;protein_id=TMQ40121.1;transl_table=11
LNKO01000043.1	Genbank	gene	24630	26024	.	+	.	ID=gene-AO052_03245;Name=AO052_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03245
LNKO01000043.1	Protein Homology	CDS	24630	26024	.	+	0	ID=cds-TMQ40122.1;Parent=gene-AO052_03245;Dbxref=NCBI_GP:TMQ40122.1;Name=TMQ40122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996443.1;locus_tag=AO052_03245;product=MATE family efflux transporter;protein_id=TMQ40122.1;transl_table=11
LNKO01000043.1	Genbank	gene	26033	26749	.	+	.	ID=gene-AO052_03250;Name=AO052_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03250
LNKO01000043.1	Protein Homology	CDS	26033	26749	.	+	0	ID=cds-TMQ40123.1;Parent=gene-AO052_03250;Dbxref=NCBI_GP:TMQ40123.1;Name=TMQ40123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693622.1;locus_tag=AO052_03250;product=transcriptional regulator;protein_id=TMQ40123.1;transl_table=11
LNKO01000043.1	Genbank	gene	26945	28132	.	+	.	ID=gene-AO052_03255;Name=AO052_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03255
LNKO01000043.1	Protein Homology	CDS	26945	28132	.	+	0	ID=cds-TMQ40124.1;Parent=gene-AO052_03255;Dbxref=NCBI_GP:TMQ40124.1;Name=TMQ40124.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996441.1;locus_tag=AO052_03255;product=tyrosine--tRNA ligase;protein_id=TMQ40124.1;transl_table=11
LNKO01000043.1	Genbank	gene	28215	29162	.	-	.	ID=gene-AO052_03260;Name=AO052_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03260
LNKO01000043.1	Protein Homology	CDS	28215	29162	.	-	0	ID=cds-TMQ40125.1;Parent=gene-AO052_03260;Dbxref=NCBI_GP:TMQ40125.1;Name=TMQ40125.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44328.1;locus_tag=AO052_03260;product=ribose-phosphate pyrophosphokinase;protein_id=TMQ40125.1;transl_table=11
LNKO01000043.1	Genbank	gene	29164	30105	.	-	.	ID=gene-AO052_03265;Name=AO052_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03265
LNKO01000043.1	Protein Homology	CDS	29164	30105	.	-	0	ID=cds-TMQ40140.1;Parent=gene-AO052_03265;Dbxref=NCBI_GP:TMQ40140.1;Name=TMQ40140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45271.1;locus_tag=AO052_03265;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=TMQ40140.1;transl_table=11
LNKO01000043.1	Genbank	gene	30117	30746	.	-	.	ID=gene-AO052_03270;Name=AO052_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03270
LNKO01000043.1	Protein Homology	CDS	30117	30746	.	-	0	ID=cds-TMQ40126.1;Parent=gene-AO052_03270;Dbxref=NCBI_GP:TMQ40126.1;Name=TMQ40126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL42.1;locus_tag=AO052_03270;product=outer membrane lipoprotein LolB;protein_id=TMQ40126.1;transl_table=11
LNKO01000043.1	Genbank	gene	30809	32059	.	-	.	ID=gene-AO052_03275;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AO052_03275
LNKO01000043.1	Protein Homology	CDS	30809	32059	.	-	0	ID=cds-TMQ40127.1;Parent=gene-AO052_03275;Dbxref=NCBI_GP:TMQ40127.1;Name=TMQ40127.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UJ23.1;locus_tag=AO052_03275;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=TMQ40127.1;transl_table=11
LNKO01000043.1	Genbank	gene	32066	32677	.	-	.	ID=gene-AO052_03280;Name=AO052_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03280
LNKO01000043.1	Protein Homology	CDS	32066	32677	.	-	0	ID=cds-TMQ40128.1;Parent=gene-AO052_03280;Dbxref=NCBI_GP:TMQ40128.1;Name=TMQ40128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525969.1;locus_tag=AO052_03280;product=hypothetical protein;protein_id=TMQ40128.1;transl_table=11
LNKO01000043.1	Genbank	gene	32743	34005	.	-	.	ID=gene-AO052_03285;Name=AO052_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03285
LNKO01000043.1	Protein Homology	CDS	32743	34005	.	-	0	ID=cds-TMQ40129.1;Parent=gene-AO052_03285;Dbxref=NCBI_GP:TMQ40129.1;Name=TMQ40129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632473.1;locus_tag=AO052_03285;product=phosphate permease;protein_id=TMQ40129.1;transl_table=11
LNKO01000043.1	Genbank	gene	34030	34710	.	-	.	ID=gene-AO052_03290;Name=AO052_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03290
LNKO01000043.1	Protein Homology	CDS	34030	34710	.	-	0	ID=cds-TMQ40130.1;Parent=gene-AO052_03290;Dbxref=NCBI_GP:TMQ40130.1;Name=TMQ40130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44271.1;locus_tag=AO052_03290;product=phosphate transport regulator;protein_id=TMQ40130.1;transl_table=11
LNKO01000043.1	Genbank	gene	34918	35373	.	+	.	ID=gene-AO052_03295;Name=AO052_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03295
LNKO01000043.1	Protein Homology	CDS	34918	35373	.	+	0	ID=cds-TMQ40131.1;Parent=gene-AO052_03295;Dbxref=NCBI_GP:TMQ40131.1;Name=TMQ40131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005623840.1;locus_tag=AO052_03295;product=hypothetical protein;protein_id=TMQ40131.1;transl_table=11
LNKO01000043.1	Genbank	gene	35412	35699	.	+	.	ID=gene-AO052_03300;Name=AO052_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03300
LNKO01000043.1	Protein Homology	CDS	35412	35699	.	+	0	ID=cds-TMQ40132.1;Parent=gene-AO052_03300;Dbxref=NCBI_GP:TMQ40132.1;Name=TMQ40132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702423.1;locus_tag=AO052_03300;product=hypothetical protein;protein_id=TMQ40132.1;transl_table=11
LNKO01000043.1	Genbank	gene	35759	36682	.	+	.	ID=gene-AO052_03305;Name=AO052_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03305
LNKO01000043.1	Protein Homology	CDS	35759	36682	.	+	0	ID=cds-TMQ40133.1;Parent=gene-AO052_03305;Dbxref=NCBI_GP:TMQ40133.1;Name=TMQ40133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44268.2;locus_tag=AO052_03305;product=hypothetical protein;protein_id=TMQ40133.1;transl_table=11
LNKO01000043.1	Genbank	gene	36672	37388	.	+	.	ID=gene-AO052_03310;Name=AO052_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03310
LNKO01000043.1	Protein Homology	CDS	36672	37388	.	+	0	ID=cds-TMQ40134.1;Parent=gene-AO052_03310;Dbxref=NCBI_GP:TMQ40134.1;Name=TMQ40134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996434.1;locus_tag=AO052_03310;product=hypothetical protein;protein_id=TMQ40134.1;transl_table=11
LNKO01000043.1	Genbank	gene	37712	38755	.	+	.	ID=gene-AO052_03315;Name=AO052_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03315
LNKO01000043.1	Protein Homology	CDS	37712	38755	.	+	0	ID=cds-TMQ40135.1;Parent=gene-AO052_03315;Dbxref=NCBI_GP:TMQ40135.1;Name=TMQ40135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527754.1;locus_tag=AO052_03315;product=hypothetical protein;protein_id=TMQ40135.1;transl_table=11
LNKO01000043.1	Genbank	gene	38878	40254	.	+	.	ID=gene-AO052_03320;Name=AO052_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03320
LNKO01000043.1	Protein Homology	CDS	38878	40254	.	+	0	ID=cds-TMQ40136.1;Parent=gene-AO052_03320;Dbxref=NCBI_GP:TMQ40136.1;Name=TMQ40136.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45266.1;locus_tag=AO052_03320;product=DNA repair protein RadA;protein_id=TMQ40136.1;transl_table=11
LNKO01000043.1	Genbank	gene	40334	40813	.	+	.	ID=gene-AO052_03325;Name=AO052_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03325
LNKO01000043.1	Protein Homology	CDS	40334	40813	.	+	0	ID=cds-TMQ40137.1;Parent=gene-AO052_03325;Dbxref=NCBI_GP:TMQ40137.1;Name=TMQ40137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45265.1;locus_tag=AO052_03325;product=transcriptional regulator;protein_id=TMQ40137.1;transl_table=11
LNKO01000043.1	Genbank	gene	40815	43583	.	+	.	ID=gene-AO052_03330;Name=AO052_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03330
LNKO01000043.1	Protein Homology	CDS	40815	43583	.	+	0	ID=cds-TMQ40138.1;Parent=gene-AO052_03330;Dbxref=NCBI_GP:TMQ40138.1;Name=TMQ40138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525965.1;locus_tag=AO052_03330;product=cell division protein FtsK;protein_id=TMQ40138.1;transl_table=11
LNKO01000043.1	Genbank	gene	43601	44218	.	+	.	ID=gene-AO052_03335;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AO052_03335
LNKO01000043.1	Protein Homology	CDS	43601	44218	.	+	0	ID=cds-TMQ40139.1;Parent=gene-AO052_03335;Dbxref=NCBI_GP:TMQ40139.1;Name=TMQ40139.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626003.1;locus_tag=AO052_03335;product=outer membrane lipoprotein carrier protein LolA;protein_id=TMQ40139.1;transl_table=11
LNKO01000043.1	Genbank	pseudogene	44280	45143	.	+	.	ID=gene-AO052_03340;Name=AO052_03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03340;pseudo=true
LNKO01000043.1	Protein Homology	CDS	44280	45143	.	+	0	ID=cds-AO052_03340;Parent=gene-AO052_03340;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653262.1;locus_tag=AO052_03340;pseudo=true;transl_table=11
##sequence-region LNKO01000044.1 1 23517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000044.1	Genbank	region	1	23517	.	+	.	ID=LNKO01000044.1:1..23517;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000044.1	Protein Homology	pseudogene	1	484	.	+	.	ID=gene-AO052_03345;Name=AO052_03345;Note=disrupted;description=recombination factor protein RarA;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03345;pseudo=true
LNKO01000044.1	Genbank	gene	550	1848	.	-	.	ID=gene-AO052_03350;Name=AO052_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03350
LNKO01000044.1	Protein Homology	CDS	550	1848	.	-	0	ID=cds-TMQ40009.1;Parent=gene-AO052_03350;Dbxref=NCBI_GP:TMQ40009.1;Name=TMQ40009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UJ35.1;locus_tag=AO052_03350;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TMQ40009.1;transl_table=11
LNKO01000044.1	Genbank	gene	1848	2684	.	-	.	ID=gene-AO052_03355;Name=AO052_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03355
LNKO01000044.1	Protein Homology	CDS	1848	2684	.	-	0	ID=cds-TMQ40010.1;Parent=gene-AO052_03355;Dbxref=NCBI_GP:TMQ40010.1;Name=TMQ40010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641775.1;locus_tag=AO052_03355;product=formyltetrahydrofolate deformylase;protein_id=TMQ40010.1;transl_table=11
LNKO01000044.1	Genbank	gene	2754	3158	.	-	.	ID=gene-AO052_03360;Name=AO052_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03360
LNKO01000044.1	Protein Homology	CDS	2754	3158	.	-	0	ID=cds-TMQ40011.1;Parent=gene-AO052_03360;Dbxref=NCBI_GP:TMQ40011.1;Name=TMQ40011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43841.1;locus_tag=AO052_03360;product=DNA-binding protein H-NS-like protein;protein_id=TMQ40011.1;transl_table=11
LNKO01000044.1	Genbank	gene	3601	5121	.	+	.	ID=gene-AO052_03365;Name=AO052_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03365
LNKO01000044.1	Protein Homology	CDS	3601	5121	.	+	0	ID=cds-TMQ40012.1;Parent=gene-AO052_03365;Dbxref=NCBI_GP:TMQ40012.1;Name=TMQ40012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702414.1;locus_tag=AO052_03365;product=Na+/H+ antiporter;protein_id=TMQ40012.1;transl_table=11
LNKO01000044.1	Genbank	gene	5189	5338	.	+	.	ID=gene-AO052_03370;Name=AO052_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03370
LNKO01000044.1	Protein Homology	CDS	5189	5338	.	+	0	ID=cds-TMQ40013.1;Parent=gene-AO052_03370;Dbxref=NCBI_GP:TMQ40013.1;Name=TMQ40013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656916.1;locus_tag=AO052_03370;product=formyltetrahydrofolate deformylase;protein_id=TMQ40013.1;transl_table=11
LNKO01000044.1	Genbank	gene	5388	7109	.	+	.	ID=gene-AO052_03375;Name=AO052_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03375
LNKO01000044.1	Protein Homology	CDS	5388	7109	.	+	0	ID=cds-TMQ40014.1;Parent=gene-AO052_03375;Dbxref=NCBI_GP:TMQ40014.1;Name=TMQ40014.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665261.1;locus_tag=AO052_03375;product=acetolactate synthase 3 catalytic subunit;protein_id=TMQ40014.1;transl_table=11
LNKO01000044.1	Genbank	gene	7109	7600	.	+	.	ID=gene-AO052_03380;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=AO052_03380
LNKO01000044.1	Protein Homology	CDS	7109	7600	.	+	0	ID=cds-TMQ40015.1;Parent=gene-AO052_03380;Dbxref=NCBI_GP:TMQ40015.1;Name=TMQ40015.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;inference=EXISTENCE: similar to AA sequence:SwissProt:P45260.1;locus_tag=AO052_03380;product=acetolactate synthase small subunit;protein_id=TMQ40015.1;transl_table=11
LNKO01000044.1	Genbank	gene	7894	9627	.	-	.	ID=gene-AO052_03385;Name=AO052_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03385
LNKO01000044.1	Protein Homology	CDS	7894	9627	.	-	0	ID=cds-TMQ40016.1;Parent=gene-AO052_03385;Dbxref=NCBI_GP:TMQ40016.1;Name=TMQ40016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL12.1;locus_tag=AO052_03385;product=arginyl-tRNA synthetase;protein_id=TMQ40016.1;transl_table=11
LNKO01000044.1	Genbank	gene	9707	10276	.	+	.	ID=gene-AO052_03390;Name=AO052_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03390
LNKO01000044.1	Protein Homology	CDS	9707	10276	.	+	0	ID=cds-TMQ40017.1;Parent=gene-AO052_03390;Dbxref=NCBI_GP:TMQ40017.1;Name=TMQ40017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647225.1;locus_tag=AO052_03390;product=hypothetical protein;protein_id=TMQ40017.1;transl_table=11
LNKO01000044.1	Genbank	gene	10282	10578	.	+	.	ID=gene-AO052_03395;Name=AO052_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03395
LNKO01000044.1	Protein Homology	CDS	10282	10578	.	+	0	ID=cds-TMQ40018.1;Parent=gene-AO052_03395;Dbxref=NCBI_GP:TMQ40018.1;Name=TMQ40018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996418.1;locus_tag=AO052_03395;product=glucose-6-phosphate isomerase;protein_id=TMQ40018.1;transl_table=11
LNKO01000044.1	Genbank	gene	10604	11068	.	+	.	ID=gene-AO052_03400;Name=AO052_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03400
LNKO01000044.1	Protein Homology	CDS	10604	11068	.	+	0	ID=cds-TMQ40019.1;Parent=gene-AO052_03400;Dbxref=NCBI_GP:TMQ40019.1;Name=TMQ40019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996417.1;locus_tag=AO052_03400;product=hypothetical protein;protein_id=TMQ40019.1;transl_table=11
LNKO01000044.1	Genbank	gene	11253	12218	.	-	.	ID=gene-AO052_03405;Name=AO052_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03405
LNKO01000044.1	Protein Homology	CDS	11253	12218	.	-	0	ID=cds-TMQ40020.1;Parent=gene-AO052_03405;Dbxref=NCBI_GP:TMQ40020.1;Name=TMQ40020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525961.1;locus_tag=AO052_03405;product=glycosyl transferase family A;protein_id=TMQ40020.1;transl_table=11
LNKO01000044.1	Genbank	gene	12536	12634	.	-	.	ID=gene-AO052_03410;Name=AO052_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03410
LNKO01000044.1	Protein Homology	CDS	12536	12634	.	-	0	ID=cds-TMQ40021.1;Parent=gene-AO052_03410;Dbxref=NCBI_GP:TMQ40021.1;Name=TMQ40021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653296.1;locus_tag=AO052_03410;product=30S ribosomal protein S15;protein_id=TMQ40021.1;transl_table=11
LNKO01000044.1	Genbank	gene	12869	14518	.	-	.	ID=gene-AO052_03415;Name=AO052_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03415
LNKO01000044.1	Protein Homology	CDS	12869	14518	.	-	0	ID=cds-TMQ40022.1;Parent=gene-AO052_03415;Dbxref=NCBI_GP:TMQ40022.1;Name=TMQ40022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702411.1;locus_tag=AO052_03415;product=glucose-6-phosphate isomerase;protein_id=TMQ40022.1;transl_table=11
LNKO01000044.1	Genbank	gene	14615	15697	.	-	.	ID=gene-AO052_03420;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AO052_03420
LNKO01000044.1	Protein Homology	CDS	14615	15697	.	-	0	ID=cds-TMQ40023.1;Parent=gene-AO052_03420;Dbxref=NCBI_GP:TMQ40023.1;Name=TMQ40023.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550843.1;locus_tag=AO052_03420;product=alanine racemase;protein_id=TMQ40023.1;transl_table=11
LNKO01000044.1	Genbank	gene	15707	17113	.	-	.	ID=gene-AO052_03425;Name=AO052_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03425
LNKO01000044.1	Protein Homology	CDS	15707	17113	.	-	0	ID=cds-TMQ40024.1;Parent=gene-AO052_03425;Dbxref=NCBI_GP:TMQ40024.1;Name=TMQ40024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45256.2;locus_tag=AO052_03425;product=replicative DNA helicase;protein_id=TMQ40024.1;transl_table=11
LNKO01000044.1	Genbank	gene	17255	18691	.	-	.	ID=gene-AO052_03430;Name=AO052_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03430
LNKO01000044.1	Protein Homology	CDS	17255	18691	.	-	0	ID=cds-TMQ40025.1;Parent=gene-AO052_03430;Dbxref=NCBI_GP:TMQ40025.1;Name=TMQ40025.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996412.1;locus_tag=AO052_03430;product=pyruvate kinase;protein_id=TMQ40025.1;transl_table=11
LNKO01000044.1	Genbank	gene	18922	18998	.	+	.	ID=gene-AO052_03435;Name=AO052_03435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_03435
LNKO01000044.1	tRNAscan-SE	tRNA	18922	18998	.	+	.	ID=rna-AO052_03435;Parent=gene-AO052_03435;anticodon=(pos:18956..18958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_03435;product=tRNA-Val
LNKO01000044.1	tRNAscan-SE	exon	18922	18998	.	+	.	ID=exon-AO052_03435-1;Parent=rna-AO052_03435;anticodon=(pos:18956..18958);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_03435;product=tRNA-Val
LNKO01000044.1	Genbank	gene	19240	20487	.	+	.	ID=gene-AO052_03440;Name=AO052_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03440
LNKO01000044.1	Protein Homology	CDS	19240	20487	.	+	0	ID=cds-TMQ40026.1;Parent=gene-AO052_03440;Dbxref=NCBI_GP:TMQ40026.1;Name=TMQ40026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647201.1;locus_tag=AO052_03440;product=preprotein translocase;protein_id=TMQ40026.1;transl_table=11
LNKO01000044.1	Genbank	gene	20484	20684	.	-	.	ID=gene-AO052_03445;Name=AO052_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03445
LNKO01000044.1	Protein Homology	CDS	20484	20684	.	-	0	ID=cds-TMQ40027.1;Parent=gene-AO052_03445;Dbxref=NCBI_GP:TMQ40027.1;Name=TMQ40027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661499.1;locus_tag=AO052_03445;product=transcriptional regulator;protein_id=TMQ40027.1;transl_table=11
LNKO01000044.1	Genbank	gene	20923	21774	.	-	.	ID=gene-AO052_03450;Name=AO052_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03450
LNKO01000044.1	Protein Homology	CDS	20923	21774	.	-	0	ID=cds-TMQ40028.1;Parent=gene-AO052_03450;Dbxref=NCBI_GP:TMQ40028.1;Name=TMQ40028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525955.1;locus_tag=AO052_03450;product=antirepressor;protein_id=TMQ40028.1;transl_table=11
LNKO01000044.1	Genbank	gene	22105	22458	.	-	.	ID=gene-AO052_03455;Name=AO052_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03455
LNKO01000044.1	Protein Homology	CDS	22105	22458	.	-	0	ID=cds-TMQ40029.1;Parent=gene-AO052_03455;Dbxref=NCBI_GP:TMQ40029.1;Name=TMQ40029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996405.1;locus_tag=AO052_03455;product=hypothetical protein;protein_id=TMQ40029.1;transl_table=11
LNKO01000044.1	Genbank	gene	22445	22885	.	-	.	ID=gene-AO052_03460;Name=AO052_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03460
LNKO01000044.1	Protein Homology	CDS	22445	22885	.	-	0	ID=cds-TMQ40030.1;Parent=gene-AO052_03460;Dbxref=NCBI_GP:TMQ40030.1;Name=TMQ40030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005684834.1;locus_tag=AO052_03460;product=hypothetical protein;protein_id=TMQ40030.1;transl_table=11
LNKO01000044.1	Genbank	gene	23029	23379	.	-	.	ID=gene-AO052_03465;Name=AO052_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03465
LNKO01000044.1	Protein Homology	CDS	23029	23379	.	-	0	ID=cds-TMQ40031.1;Parent=gene-AO052_03465;Dbxref=NCBI_GP:TMQ40031.1;Name=TMQ40031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525953.1;locus_tag=AO052_03465;product=hypothetical protein;protein_id=TMQ40031.1;transl_table=11
##sequence-region LNKO01000045.1 1 42467
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000045.1	Genbank	region	1	42467	.	+	.	ID=LNKO01000045.1:1..42467;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000045.1	Genbank	gene	402	581	.	+	.	ID=gene-AO052_03470;Name=AO052_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03470
LNKO01000045.1	Protein Homology	CDS	402	581	.	+	0	ID=cds-TMQ39831.1;Parent=gene-AO052_03470;Dbxref=NCBI_GP:TMQ39831.1;Name=TMQ39831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652248.1;locus_tag=AO052_03470;product=hypothetical protein;protein_id=TMQ39831.1;transl_table=11
LNKO01000045.1	Genbank	gene	641	1075	.	-	.	ID=gene-AO052_03475;Name=AO052_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03475
LNKO01000045.1	Protein Homology	CDS	641	1075	.	-	0	ID=cds-TMQ39832.1;Parent=gene-AO052_03475;Dbxref=NCBI_GP:TMQ39832.1;Name=TMQ39832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668705.1;locus_tag=AO052_03475;product=single-stranded DNA-binding protein;protein_id=TMQ39832.1;transl_table=11
LNKO01000045.1	Genbank	gene	1075	1719	.	-	.	ID=gene-AO052_03480;Name=AO052_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03480
LNKO01000045.1	Protein Homology	CDS	1075	1719	.	-	0	ID=cds-TMQ39833.1;Parent=gene-AO052_03480;Dbxref=NCBI_GP:TMQ39833.1;Name=TMQ39833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525951.1;locus_tag=AO052_03480;product=translocation protein TolB precursor;protein_id=TMQ39833.1;transl_table=11
LNKO01000045.1	Genbank	gene	1928	2611	.	-	.	ID=gene-AO052_03485;Name=AO052_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03485
LNKO01000045.1	Protein Homology	CDS	1928	2611	.	-	0	ID=cds-TMQ39834.1;Parent=gene-AO052_03485;Dbxref=NCBI_GP:TMQ39834.1;Name=TMQ39834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525950.1;locus_tag=AO052_03485;product=bacteriocin;protein_id=TMQ39834.1;transl_table=11
LNKO01000045.1	Genbank	gene	3539	4051	.	-	.	ID=gene-AO052_03490;Name=AO052_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03490
LNKO01000045.1	Protein Homology	CDS	3539	4051	.	-	0	ID=cds-TMQ39835.1;Parent=gene-AO052_03490;Dbxref=NCBI_GP:TMQ39835.1;Name=TMQ39835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525949.1;locus_tag=AO052_03490;product=hypothetical protein;protein_id=TMQ39835.1;transl_table=11
LNKO01000045.1	Genbank	gene	4268	5074	.	-	.	ID=gene-AO052_03495;Name=AO052_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03495
LNKO01000045.1	Protein Homology	CDS	4268	5074	.	-	0	ID=cds-TMQ39836.1;Parent=gene-AO052_03495;Dbxref=NCBI_GP:TMQ39836.1;Name=TMQ39836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641711.1;locus_tag=AO052_03495;product=hypothetical protein;protein_id=TMQ39836.1;transl_table=11
LNKO01000045.1	Genbank	gene	5600	5779	.	-	.	ID=gene-AO052_03500;Name=AO052_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03500
LNKO01000045.1	Protein Homology	CDS	5600	5779	.	-	0	ID=cds-TMQ39837.1;Parent=gene-AO052_03500;Dbxref=NCBI_GP:TMQ39837.1;Name=TMQ39837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213617.1;locus_tag=AO052_03500;product=hypothetical protein;protein_id=TMQ39837.1;transl_table=11
LNKO01000045.1	Genbank	gene	5910	6854	.	-	.	ID=gene-AO052_03505;Name=AO052_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03505
LNKO01000045.1	Protein Homology	CDS	5910	6854	.	-	0	ID=cds-TMQ39838.1;Parent=gene-AO052_03505;Dbxref=NCBI_GP:TMQ39838.1;Name=TMQ39838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525947.1;locus_tag=AO052_03505;product=recombinase;protein_id=TMQ39838.1;transl_table=11
LNKO01000045.1	Genbank	gene	6867	7160	.	-	.	ID=gene-AO052_03510;Name=AO052_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03510
LNKO01000045.1	Protein Homology	CDS	6867	7160	.	-	0	ID=cds-TMQ39839.1;Parent=gene-AO052_03510;Dbxref=NCBI_GP:TMQ39839.1;Name=TMQ39839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692614.1;locus_tag=AO052_03510;product=hypothetical protein;protein_id=TMQ39839.1;transl_table=11
LNKO01000045.1	Genbank	gene	7157	7504	.	-	.	ID=gene-AO052_03515;Name=AO052_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03515
LNKO01000045.1	Protein Homology	CDS	7157	7504	.	-	0	ID=cds-TMQ39840.1;Parent=gene-AO052_03515;Dbxref=NCBI_GP:TMQ39840.1;Name=TMQ39840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525945.1;locus_tag=AO052_03515;product=hypothetical protein;protein_id=TMQ39840.1;transl_table=11
LNKO01000045.1	Genbank	gene	7588	8226	.	-	.	ID=gene-AO052_03520;Name=AO052_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03520
LNKO01000045.1	Protein Homology	CDS	7588	8226	.	-	0	ID=cds-TMQ39841.1;Parent=gene-AO052_03520;Dbxref=NCBI_GP:TMQ39841.1;Name=TMQ39841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525944.1;locus_tag=AO052_03520;product=bacteriocin;protein_id=TMQ39841.1;transl_table=11
LNKO01000045.1	Genbank	gene	8536	8628	.	-	.	ID=gene-AO052_03525;Name=AO052_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03525
LNKO01000045.1	Protein Homology	CDS	8536	8628	.	-	0	ID=cds-TMQ39842.1;Parent=gene-AO052_03525;Dbxref=NCBI_GP:TMQ39842.1;Name=TMQ39842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652700.1;locus_tag=AO052_03525;product=transcriptional regulator;protein_id=TMQ39842.1;transl_table=11
LNKO01000045.1	Protein Homology	pseudogene	8633	9123	.	-	.	ID=gene-AO052_03530;Name=AO052_03530;Note=disrupted;description=helicase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03530;pseudo=true
LNKO01000045.1	Genbank	gene	10000	10944	.	-	.	ID=gene-AO052_03535;Name=AO052_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03535
LNKO01000045.1	Protein Homology	CDS	10000	10944	.	-	0	ID=cds-TMQ39843.1;Parent=gene-AO052_03535;Dbxref=NCBI_GP:TMQ39843.1;Name=TMQ39843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010246556.1;locus_tag=AO052_03535;product=hypothetical protein;protein_id=TMQ39843.1;transl_table=11
LNKO01000045.1	Genbank	gene	11076	11768	.	-	.	ID=gene-AO052_03540;Name=AO052_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03540
LNKO01000045.1	Protein Homology	CDS	11076	11768	.	-	0	ID=cds-TMQ39844.1;Parent=gene-AO052_03540;Dbxref=NCBI_GP:TMQ39844.1;Name=TMQ39844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525942.1;locus_tag=AO052_03540;product=hypothetical protein;protein_id=TMQ39844.1;transl_table=11
LNKO01000045.1	Genbank	gene	11910	12122	.	+	.	ID=gene-AO052_03545;Name=AO052_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03545
LNKO01000045.1	Protein Homology	CDS	11910	12122	.	+	0	ID=cds-TMQ39886.1;Parent=gene-AO052_03545;Dbxref=NCBI_GP:TMQ39886.1;Name=TMQ39886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017807416.1;locus_tag=AO052_03545;product=antirepressor;protein_id=TMQ39886.1;transl_table=11
LNKO01000045.1	Genbank	gene	12143	12439	.	+	.	ID=gene-AO052_03550;Name=AO052_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03550
LNKO01000045.1	Protein Homology	CDS	12143	12439	.	+	0	ID=cds-TMQ39845.1;Parent=gene-AO052_03550;Dbxref=NCBI_GP:TMQ39845.1;Name=TMQ39845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687168.1;locus_tag=AO052_03550;product=hypothetical protein;protein_id=TMQ39845.1;transl_table=11
LNKO01000045.1	Genbank	gene	12487	13155	.	+	.	ID=gene-AO052_03555;Name=AO052_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03555
LNKO01000045.1	Protein Homology	CDS	12487	13155	.	+	0	ID=cds-TMQ39846.1;Parent=gene-AO052_03555;Dbxref=NCBI_GP:TMQ39846.1;Name=TMQ39846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996396.1;locus_tag=AO052_03555;product=antirepressor;protein_id=TMQ39846.1;transl_table=11
LNKO01000045.1	Genbank	gene	13152	13910	.	+	.	ID=gene-AO052_03560;Name=AO052_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03560
LNKO01000045.1	Protein Homology	CDS	13152	13910	.	+	0	ID=cds-TMQ39847.1;Parent=gene-AO052_03560;Dbxref=NCBI_GP:TMQ39847.1;Name=TMQ39847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656659.1;locus_tag=AO052_03560;product=DNA-binding protein;protein_id=TMQ39847.1;transl_table=11
LNKO01000045.1	Genbank	gene	13895	14536	.	+	.	ID=gene-AO052_03565;Name=AO052_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03565
LNKO01000045.1	Protein Homology	CDS	13895	14536	.	+	0	ID=cds-TMQ39848.1;Parent=gene-AO052_03565;Dbxref=NCBI_GP:TMQ39848.1;Name=TMQ39848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272502.1;locus_tag=AO052_03565;product=replication P;protein_id=TMQ39848.1;transl_table=11
LNKO01000045.1	Genbank	gene	14533	14757	.	+	.	ID=gene-AO052_03570;Name=AO052_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03570
LNKO01000045.1	Protein Homology	CDS	14533	14757	.	+	0	ID=cds-TMQ39849.1;Parent=gene-AO052_03570;Dbxref=NCBI_GP:TMQ39849.1;Name=TMQ39849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688841.1;locus_tag=AO052_03570;product=hypothetical protein;protein_id=TMQ39849.1;transl_table=11
LNKO01000045.1	Genbank	gene	14794	15210	.	+	.	ID=gene-AO052_03575;Name=AO052_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03575
LNKO01000045.1	Protein Homology	CDS	14794	15210	.	+	0	ID=cds-TMQ39850.1;Parent=gene-AO052_03575;Dbxref=NCBI_GP:TMQ39850.1;Name=TMQ39850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272609.1;locus_tag=AO052_03575;product=recombinase;protein_id=TMQ39850.1;transl_table=11
LNKO01000045.1	Genbank	gene	15303	15845	.	+	.	ID=gene-AO052_03580;Name=AO052_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03580
LNKO01000045.1	Protein Homology	CDS	15303	15845	.	+	0	ID=cds-TMQ39851.1;Parent=gene-AO052_03580;Dbxref=NCBI_GP:TMQ39851.1;Name=TMQ39851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668550.1;locus_tag=AO052_03580;product=NinG recombination protein;protein_id=TMQ39851.1;transl_table=11
LNKO01000045.1	Genbank	gene	15842	16213	.	+	.	ID=gene-AO052_03585;Name=AO052_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03585
LNKO01000045.1	Protein Homology	CDS	15842	16213	.	+	0	ID=cds-TMQ39852.1;Parent=gene-AO052_03585;Dbxref=NCBI_GP:TMQ39852.1;Name=TMQ39852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672911.1;locus_tag=AO052_03585;product=hypothetical protein;protein_id=TMQ39852.1;transl_table=11
LNKO01000045.1	Genbank	gene	16313	16495	.	+	.	ID=gene-AO052_03590;Name=AO052_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03590
LNKO01000045.1	Protein Homology	CDS	16313	16495	.	+	0	ID=cds-TMQ39853.1;Parent=gene-AO052_03590;Dbxref=NCBI_GP:TMQ39853.1;Name=TMQ39853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653907.1;locus_tag=AO052_03590;product=toxin HicA;protein_id=TMQ39853.1;transl_table=11
LNKO01000045.1	Genbank	gene	16527	16976	.	+	.	ID=gene-AO052_03595;Name=AO052_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03595
LNKO01000045.1	Protein Homology	CDS	16527	16976	.	+	0	ID=cds-TMQ39854.1;Parent=gene-AO052_03595;Dbxref=NCBI_GP:TMQ39854.1;Name=TMQ39854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996391.1;locus_tag=AO052_03595;product=CopG family transcriptional regulator;protein_id=TMQ39854.1;transl_table=11
LNKO01000045.1	Genbank	gene	17021	17203	.	-	.	ID=gene-AO052_03600;Name=AO052_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03600
LNKO01000045.1	Protein Homology	CDS	17021	17203	.	-	0	ID=cds-TMQ39855.1;Parent=gene-AO052_03600;Dbxref=NCBI_GP:TMQ39855.1;Name=TMQ39855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653913.1;locus_tag=AO052_03600;product=hypothetical protein;protein_id=TMQ39855.1;transl_table=11
LNKO01000045.1	Genbank	gene	17841	18740	.	+	.	ID=gene-AO052_03605;Name=AO052_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03605
LNKO01000045.1	Protein Homology	CDS	17841	18740	.	+	0	ID=cds-TMQ39856.1;Parent=gene-AO052_03605;Dbxref=NCBI_GP:TMQ39856.1;Name=TMQ39856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525936.1;locus_tag=AO052_03605;product=antirepressor;protein_id=TMQ39856.1;transl_table=11
LNKO01000045.1	Genbank	gene	19589	19662	.	+	.	ID=gene-AO052_03610;Name=AO052_03610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_03610
LNKO01000045.1	tRNAscan-SE	tRNA	19589	19662	.	+	.	ID=rna-AO052_03610;Parent=gene-AO052_03610;anticodon=(pos:19621..19623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_03610;product=tRNA-Trp
LNKO01000045.1	tRNAscan-SE	exon	19589	19662	.	+	.	ID=exon-AO052_03610-1;Parent=rna-AO052_03610;anticodon=(pos:19621..19623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_03610;product=tRNA-Trp
LNKO01000045.1	Genbank	gene	19727	20083	.	+	.	ID=gene-AO052_03615;Name=AO052_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03615
LNKO01000045.1	Protein Homology	CDS	19727	20083	.	+	0	ID=cds-TMQ39857.1;Parent=gene-AO052_03615;Dbxref=NCBI_GP:TMQ39857.1;Name=TMQ39857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525935.1;locus_tag=AO052_03615;product=hypothetical protein;protein_id=TMQ39857.1;transl_table=11
LNKO01000045.1	Genbank	gene	20052	20654	.	+	.	ID=gene-AO052_03620;Name=AO052_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03620
LNKO01000045.1	Protein Homology	CDS	20052	20654	.	+	0	ID=cds-TMQ39858.1;Parent=gene-AO052_03620;Dbxref=NCBI_GP:TMQ39858.1;Name=TMQ39858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44187.1;locus_tag=AO052_03620;product=hypothetical protein;protein_id=TMQ39858.1;transl_table=11
LNKO01000045.1	Genbank	gene	20647	20970	.	+	.	ID=gene-AO052_03625;Name=AO052_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03625
LNKO01000045.1	Protein Homology	CDS	20647	20970	.	+	0	ID=cds-TMQ39859.1;Parent=gene-AO052_03625;Dbxref=NCBI_GP:TMQ39859.1;Name=TMQ39859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272617.1;locus_tag=AO052_03625;product=hypothetical protein;protein_id=TMQ39859.1;transl_table=11
LNKO01000045.1	Genbank	gene	20882	21163	.	+	.	ID=gene-AO052_03630;Name=AO052_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03630
LNKO01000045.1	Protein Homology	CDS	20882	21163	.	+	0	ID=cds-TMQ39860.1;Parent=gene-AO052_03630;Dbxref=NCBI_GP:TMQ39860.1;Name=TMQ39860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44185.1;locus_tag=AO052_03630;product=hypothetical protein;protein_id=TMQ39860.1;transl_table=11
LNKO01000045.1	Genbank	gene	21165	21512	.	-	.	ID=gene-AO052_03635;Name=AO052_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03635
LNKO01000045.1	Protein Homology	CDS	21165	21512	.	-	0	ID=cds-TMQ39861.1;Parent=gene-AO052_03635;Dbxref=NCBI_GP:TMQ39861.1;Name=TMQ39861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702293.1;locus_tag=AO052_03635;product=DNA-binding protein;protein_id=TMQ39861.1;transl_table=11
LNKO01000045.1	Genbank	gene	21810	22325	.	+	.	ID=gene-AO052_03640;Name=AO052_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03640
LNKO01000045.1	Protein Homology	CDS	21810	22325	.	+	0	ID=cds-TMQ39862.1;Parent=gene-AO052_03640;Dbxref=NCBI_GP:TMQ39862.1;Name=TMQ39862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57374.1;locus_tag=AO052_03640;product=hypothetical protein;protein_id=TMQ39862.1;transl_table=11
LNKO01000045.1	Genbank	gene	22312	23655	.	+	.	ID=gene-AO052_03645;Name=AO052_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03645
LNKO01000045.1	Protein Homology	CDS	22312	23655	.	+	0	ID=cds-TMQ39863.1;Parent=gene-AO052_03645;Dbxref=NCBI_GP:TMQ39863.1;Name=TMQ39863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702291.1;locus_tag=AO052_03645;product=terminase;protein_id=TMQ39863.1;transl_table=11
LNKO01000045.1	Genbank	gene	23657	24988	.	+	.	ID=gene-AO052_03650;Name=AO052_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03650
LNKO01000045.1	Protein Homology	CDS	23657	24988	.	+	0	ID=cds-TMQ39864.1;Parent=gene-AO052_03650;Dbxref=NCBI_GP:TMQ39864.1;Name=TMQ39864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527745.1;locus_tag=AO052_03650;product=hypothetical protein;protein_id=TMQ39864.1;transl_table=11
LNKO01000045.1	Genbank	pseudogene	25302	25691	.	+	.	ID=gene-AO052_03655;Name=AO052_03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03655;pseudo=true
LNKO01000045.1	Protein Homology	CDS	25302	25691	.	+	0	ID=cds-AO052_03655;Parent=gene-AO052_03655;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996381.1;locus_tag=AO052_03655;pseudo=true;transl_table=11
LNKO01000045.1	Genbank	gene	25746	26450	.	+	.	ID=gene-AO052_03660;Name=AO052_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03660
LNKO01000045.1	Protein Homology	CDS	25746	26450	.	+	0	ID=cds-TMQ39887.1;Parent=gene-AO052_03660;Dbxref=NCBI_GP:TMQ39887.1;Name=TMQ39887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005825273.1;locus_tag=AO052_03660;product=recombinase;protein_id=TMQ39887.1;transl_table=11
LNKO01000045.1	Genbank	gene	26729	27085	.	+	.	ID=gene-AO052_03665;Name=AO052_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03665
LNKO01000045.1	Protein Homology	CDS	26729	27085	.	+	0	ID=cds-TMQ39865.1;Parent=gene-AO052_03665;Dbxref=NCBI_GP:TMQ39865.1;Name=TMQ39865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44181.1;locus_tag=AO052_03665;product=hypothetical protein;protein_id=TMQ39865.1;transl_table=11
LNKO01000045.1	Genbank	gene	27147	28247	.	+	.	ID=gene-AO052_03670;Name=AO052_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03670
LNKO01000045.1	Protein Homology	CDS	27147	28247	.	+	0	ID=cds-TMQ39866.1;Parent=gene-AO052_03670;Dbxref=NCBI_GP:TMQ39866.1;Name=TMQ39866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996379.1;locus_tag=AO052_03670;product=hypothetical protein;protein_id=TMQ39866.1;transl_table=11
LNKO01000045.1	Genbank	gene	28260	28700	.	+	.	ID=gene-AO052_03675;Name=AO052_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03675
LNKO01000045.1	Protein Homology	CDS	28260	28700	.	+	0	ID=cds-TMQ39867.1;Parent=gene-AO052_03675;Dbxref=NCBI_GP:TMQ39867.1;Name=TMQ39867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702287.1;locus_tag=AO052_03675;product=hypothetical protein;protein_id=TMQ39867.1;transl_table=11
LNKO01000045.1	Genbank	gene	28710	29624	.	+	.	ID=gene-AO052_03680;Name=AO052_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03680
LNKO01000045.1	Protein Homology	CDS	28710	29624	.	+	0	ID=cds-TMQ39868.1;Parent=gene-AO052_03680;Dbxref=NCBI_GP:TMQ39868.1;Name=TMQ39868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005579235.1;locus_tag=AO052_03680;product=hypothetical protein;protein_id=TMQ39868.1;transl_table=11
LNKO01000045.1	Genbank	gene	29634	29996	.	+	.	ID=gene-AO052_03685;Name=AO052_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03685
LNKO01000045.1	Protein Homology	CDS	29634	29996	.	+	0	ID=cds-TMQ39869.1;Parent=gene-AO052_03685;Dbxref=NCBI_GP:TMQ39869.1;Name=TMQ39869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996376.1;locus_tag=AO052_03685;product=hypothetical protein;protein_id=TMQ39869.1;transl_table=11
LNKO01000045.1	Genbank	gene	29997	30443	.	+	.	ID=gene-AO052_03690;Name=AO052_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03690
LNKO01000045.1	Protein Homology	CDS	29997	30443	.	+	0	ID=cds-TMQ39870.1;Parent=gene-AO052_03690;Dbxref=NCBI_GP:TMQ39870.1;Name=TMQ39870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996375.1;locus_tag=AO052_03690;product=hypothetical protein;protein_id=TMQ39870.1;transl_table=11
LNKO01000045.1	Genbank	gene	30440	30811	.	+	.	ID=gene-AO052_03695;Name=AO052_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03695
LNKO01000045.1	Protein Homology	CDS	30440	30811	.	+	0	ID=cds-TMQ39871.1;Parent=gene-AO052_03695;Dbxref=NCBI_GP:TMQ39871.1;Name=TMQ39871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996374.1;locus_tag=AO052_03695;product=hypothetical protein;protein_id=TMQ39871.1;transl_table=11
LNKO01000045.1	Genbank	gene	30876	31238	.	+	.	ID=gene-AO052_03700;Name=AO052_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03700
LNKO01000045.1	Protein Homology	CDS	30876	31238	.	+	0	ID=cds-TMQ39872.1;Parent=gene-AO052_03700;Dbxref=NCBI_GP:TMQ39872.1;Name=TMQ39872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525927.1;locus_tag=AO052_03700;product=hypothetical protein;protein_id=TMQ39872.1;transl_table=11
LNKO01000045.1	Genbank	gene	31243	32751	.	+	.	ID=gene-AO052_03705;Name=AO052_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03705
LNKO01000045.1	Protein Homology	CDS	31243	32751	.	+	0	ID=cds-TMQ39873.1;Parent=gene-AO052_03705;Dbxref=NCBI_GP:TMQ39873.1;Name=TMQ39873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654620.1;locus_tag=AO052_03705;product=hypothetical protein;protein_id=TMQ39873.1;transl_table=11
LNKO01000045.1	Genbank	gene	32996	33427	.	+	.	ID=gene-AO052_03710;Name=AO052_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03710
LNKO01000045.1	Protein Homology	CDS	32996	33427	.	+	0	ID=cds-TMQ39874.1;Parent=gene-AO052_03710;Dbxref=NCBI_GP:TMQ39874.1;Name=TMQ39874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578492.1;locus_tag=AO052_03710;product=hypothetical protein;protein_id=TMQ39874.1;transl_table=11
LNKO01000045.1	Genbank	gene	33427	33837	.	+	.	ID=gene-AO052_03715;Name=AO052_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03715
LNKO01000045.1	Protein Homology	CDS	33427	33837	.	+	0	ID=cds-TMQ39875.1;Parent=gene-AO052_03715;Dbxref=NCBI_GP:TMQ39875.1;Name=TMQ39875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702279.1;locus_tag=AO052_03715;product=hypothetical protein;protein_id=TMQ39875.1;transl_table=11
LNKO01000045.1	Genbank	gene	33988	36078	.	+	.	ID=gene-AO052_03720;Name=AO052_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03720
LNKO01000045.1	Protein Homology	CDS	33988	36078	.	+	0	ID=cds-TMQ39876.1;Parent=gene-AO052_03720;Dbxref=NCBI_GP:TMQ39876.1;Name=TMQ39876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702278.1;locus_tag=AO052_03720;product=tail length tape measure protein;protein_id=TMQ39876.1;transl_table=11
LNKO01000045.1	Genbank	gene	36084	36860	.	+	.	ID=gene-AO052_03725;Name=AO052_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03725
LNKO01000045.1	Protein Homology	CDS	36084	36860	.	+	0	ID=cds-TMQ39877.1;Parent=gene-AO052_03725;Dbxref=NCBI_GP:TMQ39877.1;Name=TMQ39877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702277.1;locus_tag=AO052_03725;product=hypothetical protein;protein_id=TMQ39877.1;transl_table=11
LNKO01000045.1	Genbank	gene	36866	37174	.	+	.	ID=gene-AO052_03730;Name=AO052_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03730
LNKO01000045.1	Protein Homology	CDS	36866	37174	.	+	0	ID=cds-TMQ39878.1;Parent=gene-AO052_03730;Dbxref=NCBI_GP:TMQ39878.1;Name=TMQ39878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525922.1;locus_tag=AO052_03730;product=hypothetical protein;protein_id=TMQ39878.1;transl_table=11
LNKO01000045.1	Genbank	gene	37257	37436	.	+	.	ID=gene-AO052_03735;Name=AO052_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03735
LNKO01000045.1	Protein Homology	CDS	37257	37436	.	+	0	ID=cds-TMQ39879.1;Parent=gene-AO052_03735;Dbxref=NCBI_GP:TMQ39879.1;Name=TMQ39879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005572280.1;locus_tag=AO052_03735;product=hypothetical protein;protein_id=TMQ39879.1;transl_table=11
LNKO01000045.1	Genbank	gene	37451	38323	.	+	.	ID=gene-AO052_03740;Name=AO052_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03740
LNKO01000045.1	Protein Homology	CDS	37451	38323	.	+	0	ID=cds-TMQ39880.1;Parent=gene-AO052_03740;Dbxref=NCBI_GP:TMQ39880.1;Name=TMQ39880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702276.1;locus_tag=AO052_03740;product=hypothetical protein;protein_id=TMQ39880.1;transl_table=11
LNKO01000045.1	Genbank	gene	38320	38964	.	+	.	ID=gene-AO052_03745;Name=AO052_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03745
LNKO01000045.1	Protein Homology	CDS	38320	38964	.	+	0	ID=cds-TMQ39881.1;Parent=gene-AO052_03745;Dbxref=NCBI_GP:TMQ39881.1;Name=TMQ39881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702275.1;locus_tag=AO052_03745;product=baseplate protein;protein_id=TMQ39881.1;transl_table=11
LNKO01000045.1	Genbank	gene	38961	39314	.	+	.	ID=gene-AO052_03750;Name=AO052_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03750
LNKO01000045.1	Protein Homology	CDS	38961	39314	.	+	0	ID=cds-TMQ39882.1;Parent=gene-AO052_03750;Dbxref=NCBI_GP:TMQ39882.1;Name=TMQ39882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525919.1;locus_tag=AO052_03750;product=hypothetical protein;protein_id=TMQ39882.1;transl_table=11
LNKO01000045.1	Genbank	gene	39499	40017	.	+	.	ID=gene-AO052_03755;Name=AO052_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03755
LNKO01000045.1	Protein Homology	CDS	39499	40017	.	+	0	ID=cds-TMQ39883.1;Parent=gene-AO052_03755;Dbxref=NCBI_GP:TMQ39883.1;Name=TMQ39883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525918.1;locus_tag=AO052_03755;product=antirepressor;protein_id=TMQ39883.1;transl_table=11
LNKO01000045.1	Genbank	gene	40060	41202	.	+	.	ID=gene-AO052_03760;Name=AO052_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03760
LNKO01000045.1	Protein Homology	CDS	40060	41202	.	+	0	ID=cds-TMQ39884.1;Parent=gene-AO052_03760;Dbxref=NCBI_GP:TMQ39884.1;Name=TMQ39884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996361.1;locus_tag=AO052_03760;product=hypothetical protein;protein_id=TMQ39884.1;transl_table=11
LNKO01000045.1	Genbank	gene	41202	41777	.	+	.	ID=gene-AO052_03765;Name=AO052_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03765
LNKO01000045.1	Protein Homology	CDS	41202	41777	.	+	0	ID=cds-TMQ39885.1;Parent=gene-AO052_03765;Dbxref=NCBI_GP:TMQ39885.1;Name=TMQ39885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702271.1;locus_tag=AO052_03765;product=hypothetical protein;protein_id=TMQ39885.1;transl_table=11
LNKO01000045.1	Genbank	pseudogene	42108	42467	.	+	.	ID=gene-AO052_03770;Name=AO052_03770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03770;pseudo=true
LNKO01000045.1	Protein Homology	CDS	42108	42467	.	+	0	ID=cds-AO052_03770;Parent=gene-AO052_03770;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659462.1;locus_tag=AO052_03770;pseudo=true;transl_table=11
##sequence-region LNKO01000046.1 1 2595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000046.1	Genbank	region	1	2595	.	+	.	ID=LNKO01000046.1:1..2595;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000046.1	Genbank	gene	503	1519	.	-	.	ID=gene-AO052_03775;Name=AO052_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03775
LNKO01000046.1	Protein Homology	CDS	503	1519	.	-	0	ID=cds-TMQ39806.1;Parent=gene-AO052_03775;Dbxref=NCBI_GP:TMQ39806.1;Name=TMQ39806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638152.1;locus_tag=AO052_03775;product=replication protein;protein_id=TMQ39806.1;transl_table=11
LNKO01000046.1	Genbank	gene	2030	2251	.	+	.	ID=gene-AO052_03780;Name=AO052_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03780
LNKO01000046.1	GeneMarkS+	CDS	2030	2251	.	+	0	ID=cds-TMQ39807.1;Parent=gene-AO052_03780;Dbxref=NCBI_GP:TMQ39807.1;Name=TMQ39807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_03780;product=hypothetical protein;protein_id=TMQ39807.1;transl_table=11
LNKO01000046.1	Genbank	gene	2248	2568	.	+	.	ID=gene-AO052_03785;Name=AO052_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03785
LNKO01000046.1	Protein Homology	CDS	2248	2568	.	+	0	ID=cds-TMQ39808.1;Parent=gene-AO052_03785;Dbxref=NCBI_GP:TMQ39808.1;Name=TMQ39808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005765071.1;locus_tag=AO052_03785;product=hypothetical protein;protein_id=TMQ39808.1;transl_table=11
##sequence-region LNKO01000047.1 1 4496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000047.1	Genbank	region	1	4496	.	+	.	ID=LNKO01000047.1:1..4496;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000047.1	Genbank	pseudogene	1	937	.	+	.	ID=gene-AO052_03790;Name=AO052_03790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03790;pseudo=true
LNKO01000047.1	Protein Homology	CDS	1	937	.	+	1	ID=cds-AO052_03790;Parent=gene-AO052_03790;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO052_03790;pseudo=true;transl_table=11
LNKO01000047.1	Genbank	gene	1012	2649	.	+	.	ID=gene-AO052_03795;Name=AO052_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03795
LNKO01000047.1	Protein Homology	CDS	1012	2649	.	+	0	ID=cds-TMQ39801.1;Parent=gene-AO052_03795;Dbxref=NCBI_GP:TMQ39801.1;Name=TMQ39801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527701.1;locus_tag=AO052_03795;product=HMW2B%2C OMP-85 required for HMW1A and HMW2A secretion;protein_id=TMQ39801.1;transl_table=11
LNKO01000047.1	Genbank	gene	2734	4496	.	+	.	ID=gene-AO052_03800;Name=AO052_03800;end_range=4496,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03800;partial=true
LNKO01000047.1	Protein Homology	CDS	2734	4496	.	+	0	ID=cds-TMQ39802.1;Parent=gene-AO052_03800;Dbxref=NCBI_GP:TMQ39802.1;Name=TMQ39802.1;end_range=4496,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996606.1;locus_tag=AO052_03800;partial=true;product=adhesin;protein_id=TMQ39802.1;transl_table=11
##sequence-region LNKO01000048.1 1 1447
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000048.1	Genbank	region	1	1447	.	+	.	ID=LNKO01000048.1:1..1447;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000048.1	Genbank	pseudogene	1	849	.	+	.	ID=gene-AO052_03805;Name=AO052_03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03805;pseudo=true
LNKO01000048.1	Protein Homology	CDS	1	849	.	+	0	ID=cds-AO052_03805;Parent=gene-AO052_03805;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57476.1;locus_tag=AO052_03805;pseudo=true;transl_table=11
LNKO01000048.1	Genbank	gene	846	1226	.	+	.	ID=gene-AO052_03810;Name=AO052_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03810
LNKO01000048.1	Protein Homology	CDS	846	1226	.	+	0	ID=cds-TMQ39766.1;Parent=gene-AO052_03810;Dbxref=NCBI_GP:TMQ39766.1;Name=TMQ39766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44156.3;locus_tag=AO052_03810;product=hypothetical protein;protein_id=TMQ39766.1;transl_table=11
LNKO01000048.1	Genbank	pseudogene	1217	1447	.	+	.	ID=gene-AO052_03815;Name=AO052_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03815;pseudo=true
LNKO01000048.1	Protein Homology	CDS	1217	1447	.	+	0	ID=cds-AO052_03815;Parent=gene-AO052_03815;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO052_03815;pseudo=true;transl_table=11
##sequence-region LNKO01000049.1 1 1830
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000049.1	Genbank	region	1	1830	.	+	.	ID=LNKO01000049.1:1..1830;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000049.1	Genbank	pseudogene	1	441	.	-	.	ID=gene-AO052_03820;Name=AO052_03820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03820;pseudo=true
LNKO01000049.1	Protein Homology	CDS	1	441	.	-	0	ID=cds-AO052_03820;Parent=gene-AO052_03820;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637854.1;locus_tag=AO052_03820;pseudo=true;transl_table=11
LNKO01000049.1	Genbank	gene	443	925	.	-	.	ID=gene-AO052_03825;Name=AO052_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03825
LNKO01000049.1	Protein Homology	CDS	443	925	.	-	0	ID=cds-TMQ39750.1;Parent=gene-AO052_03825;Dbxref=NCBI_GP:TMQ39750.1;Name=TMQ39750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550720.1;locus_tag=AO052_03825;product=nuclease;protein_id=TMQ39750.1;transl_table=11
LNKO01000049.1	Genbank	gene	1041	1463	.	+	.	ID=gene-AO052_03830;Name=AO052_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03830
LNKO01000049.1	Protein Homology	CDS	1041	1463	.	+	0	ID=cds-TMQ39751.1;Parent=gene-AO052_03830;Dbxref=NCBI_GP:TMQ39751.1;Name=TMQ39751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK50.1;locus_tag=AO052_03830;product=hypothetical protein;protein_id=TMQ39751.1;transl_table=11
LNKO01000049.1	Genbank	pseudogene	1481	1830	.	+	.	ID=gene-AO052_03835;Name=AO052_03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03835;pseudo=true
LNKO01000049.1	Protein Homology	CDS	1481	1830	.	+	0	ID=cds-AO052_03835;Parent=gene-AO052_03835;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652869.1;locus_tag=AO052_03835;pseudo=true;transl_table=11
##sequence-region LNKO01000050.1 1 20812
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000050.1	Genbank	region	1	20812	.	+	.	ID=LNKO01000050.1:1..20812;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000050.1	Genbank	pseudogene	1	346	.	+	.	ID=gene-AO052_03840;Name=AO052_03840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03840;pseudo=true
LNKO01000050.1	Protein Homology	CDS	1	346	.	+	1	ID=cds-AO052_03840;Parent=gene-AO052_03840;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652869.1;locus_tag=AO052_03840;pseudo=true;transl_table=11
LNKO01000050.1	Genbank	gene	469	1824	.	+	.	ID=gene-AO052_03845;Name=AO052_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03845
LNKO01000050.1	Protein Homology	CDS	469	1824	.	+	0	ID=cds-TMQ39693.1;Parent=gene-AO052_03845;Dbxref=NCBI_GP:TMQ39693.1;Name=TMQ39693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500531.1;locus_tag=AO052_03845;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=TMQ39693.1;transl_table=11
LNKO01000050.1	Genbank	gene	1903	3846	.	+	.	ID=gene-AO052_03850;Name=AO052_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03850
LNKO01000050.1	Protein Homology	CDS	1903	3846	.	+	0	ID=cds-TMQ39694.1;Parent=gene-AO052_03850;Dbxref=NCBI_GP:TMQ39694.1;Name=TMQ39694.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702183.1;locus_tag=AO052_03850;product=ABC transporter ATP-binding protein;protein_id=TMQ39694.1;transl_table=11
LNKO01000050.1	Genbank	gene	3930	5012	.	-	.	ID=gene-AO052_03855;Name=AO052_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03855
LNKO01000050.1	Protein Homology	CDS	3930	5012	.	-	0	ID=cds-TMQ39708.1;Parent=gene-AO052_03855;Dbxref=NCBI_GP:TMQ39708.1;Name=TMQ39708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702225.1;locus_tag=AO052_03855;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=TMQ39708.1;transl_table=11
LNKO01000050.1	Genbank	gene	5142	5912	.	-	.	ID=gene-AO052_03860;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AO052_03860
LNKO01000050.1	Protein Homology	CDS	5142	5912	.	-	0	ID=cds-TMQ39695.1;Parent=gene-AO052_03860;Dbxref=NCBI_GP:TMQ39695.1;Name=TMQ39695.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996068.1;locus_tag=AO052_03860;product=spermidine/putrescine ABC transporter permease;protein_id=TMQ39695.1;transl_table=11
LNKO01000050.1	Genbank	gene	5912	6772	.	-	.	ID=gene-AO052_03865;Name=AO052_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03865
LNKO01000050.1	Protein Homology	CDS	5912	6772	.	-	0	ID=cds-TMQ39696.1;Parent=gene-AO052_03865;Dbxref=NCBI_GP:TMQ39696.1;Name=TMQ39696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698572.1;locus_tag=AO052_03865;product=spermidine/putrescine ABC transporter permease;protein_id=TMQ39696.1;transl_table=11
LNKO01000050.1	Genbank	gene	6756	7874	.	-	.	ID=gene-AO052_03870;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AO052_03870
LNKO01000050.1	Protein Homology	CDS	6756	7874	.	-	0	ID=cds-TMQ39697.1;Parent=gene-AO052_03870;Dbxref=NCBI_GP:TMQ39697.1;Name=TMQ39697.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694012.1;locus_tag=AO052_03870;product=Fe3+/spermidine/putrescine ABC transporter ATP-binding protein;protein_id=TMQ39697.1;transl_table=11
LNKO01000050.1	Genbank	pseudogene	8171	9187	.	+	.	ID=gene-AO052_03875;Name=AO052_03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03875;pseudo=true
LNKO01000050.1	Protein Homology	CDS	8171	9187	.	+	0	ID=cds-AO052_03875;Parent=gene-AO052_03875;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645339.1;locus_tag=AO052_03875;pseudo=true;transl_table=11
LNKO01000050.1	Genbank	gene	9405	9887	.	-	.	ID=gene-AO052_03880;Name=AO052_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03880
LNKO01000050.1	Protein Homology	CDS	9405	9887	.	-	0	ID=cds-TMQ39698.1;Parent=gene-AO052_03880;Dbxref=NCBI_GP:TMQ39698.1;Name=TMQ39698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45173.1;locus_tag=AO052_03880;product=DNA starvation/stationary phase protection protein;protein_id=TMQ39698.1;transl_table=11
LNKO01000050.1	Genbank	gene	10161	11039	.	+	.	ID=gene-AO052_03885;Name=AO052_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03885
LNKO01000050.1	Protein Homology	CDS	10161	11039	.	+	0	ID=cds-TMQ39699.1;Parent=gene-AO052_03885;Dbxref=NCBI_GP:TMQ39699.1;Name=TMQ39699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694010.1;locus_tag=AO052_03885;product=cytidine deaminase;protein_id=TMQ39699.1;transl_table=11
LNKO01000050.1	Genbank	gene	11082	12047	.	-	.	ID=gene-AO052_03890;Name=AO052_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03890
LNKO01000050.1	Protein Homology	CDS	11082	12047	.	-	0	ID=cds-TMQ39700.1;Parent=gene-AO052_03890;Dbxref=NCBI_GP:TMQ39700.1;Name=TMQ39700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VMT0.1;locus_tag=AO052_03890;product=tRNA (mo5U34)-methyltransferase;protein_id=TMQ39700.1;transl_table=11
LNKO01000050.1	Genbank	gene	12044	13558	.	-	.	ID=gene-AO052_03895;Name=AO052_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03895
LNKO01000050.1	Protein Homology	CDS	12044	13558	.	-	0	ID=cds-TMQ39701.1;Parent=gene-AO052_03895;Dbxref=NCBI_GP:TMQ39701.1;Name=TMQ39701.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687244.1;locus_tag=AO052_03895;product=proline:sodium symporter PutP;protein_id=TMQ39701.1;transl_table=11
LNKO01000050.1	Genbank	gene	13674	15149	.	+	.	ID=gene-AO052_03900;Name=AO052_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03900
LNKO01000050.1	Protein Homology	CDS	13674	15149	.	+	0	ID=cds-TMQ39702.1;Parent=gene-AO052_03900;Dbxref=NCBI_GP:TMQ39702.1;Name=TMQ39702.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687243.1;locus_tag=AO052_03900;product=ribonuclease G;protein_id=TMQ39702.1;transl_table=11
LNKO01000050.1	Genbank	gene	15232	15492	.	+	.	ID=gene-AO052_03905;Name=AO052_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03905
LNKO01000050.1	Protein Homology	CDS	15232	15492	.	+	0	ID=cds-TMQ39703.1;Parent=gene-AO052_03905;Dbxref=NCBI_GP:TMQ39703.1;Name=TMQ39703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996057.1;locus_tag=AO052_03905;product=virulence protein;protein_id=TMQ39703.1;transl_table=11
LNKO01000050.1	Genbank	gene	15493	15885	.	+	.	ID=gene-AO052_03910;Name=AO052_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03910
LNKO01000050.1	Protein Homology	CDS	15493	15885	.	+	0	ID=cds-TMQ39704.1;Parent=gene-AO052_03910;Dbxref=NCBI_GP:TMQ39704.1;Name=TMQ39704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525780.1;locus_tag=AO052_03910;product=twitching motility protein PilT;protein_id=TMQ39704.1;transl_table=11
LNKO01000050.1	Protein Homology	pseudogene	17272	17606	.	+	.	ID=gene-AO052_03915;Name=AO052_03915;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03915;pseudo=true
LNKO01000050.1	Genbank	gene	17840	19507	.	+	.	ID=gene-AO052_03920;Name=AO052_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03920
LNKO01000050.1	Protein Homology	CDS	17840	19507	.	+	0	ID=cds-TMQ39705.1;Parent=gene-AO052_03920;Dbxref=NCBI_GP:TMQ39705.1;Name=TMQ39705.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996054.1;locus_tag=AO052_03920;product=glutaminyl-tRNA synthetase;protein_id=TMQ39705.1;transl_table=11
LNKO01000050.1	Genbank	gene	19585	20016	.	+	.	ID=gene-AO052_03925;Name=AO052_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03925
LNKO01000050.1	Protein Homology	CDS	19585	20016	.	+	0	ID=cds-TMQ39706.1;Parent=gene-AO052_03925;Dbxref=NCBI_GP:TMQ39706.1;Name=TMQ39706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525783.1;locus_tag=AO052_03925;product=hypothetical protein;protein_id=TMQ39706.1;transl_table=11
LNKO01000050.1	Genbank	gene	20474	20812	.	+	.	ID=gene-AO052_03930;Name=AO052_03930;end_range=20812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03930;partial=true
LNKO01000050.1	Protein Homology	CDS	20474	20812	.	+	0	ID=cds-TMQ39707.1;Parent=gene-AO052_03930;Dbxref=NCBI_GP:TMQ39707.1;Name=TMQ39707.1;end_range=20812,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690062.1;locus_tag=AO052_03930;partial=true;product=hypothetical protein;protein_id=TMQ39707.1;transl_table=11
##sequence-region LNKO01000051.1 1 1361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000051.1	Genbank	region	1	1361	.	+	.	ID=LNKO01000051.1:1..1361;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000051.1	Genbank	pseudogene	1	1361	.	-	.	ID=gene-AO052_03935;Name=AO052_03935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_03935;pseudo=true
LNKO01000051.1	Protein Homology	CDS	1	1361	.	-	0	ID=cds-AO052_03935;Parent=gene-AO052_03935;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO052_03935;pseudo=true;transl_table=11
##sequence-region LNKO01000052.1 1 54647
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000052.1	Genbank	region	1	54647	.	+	.	ID=LNKO01000052.1:1..54647;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000052.1	Genbank	gene	1	917	.	-	.	ID=gene-AO052_03940;Name=AO052_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03940;partial=true;start_range=.,1
LNKO01000052.1	Protein Homology	CDS	1	917	.	-	0	ID=cds-TMQ39596.1;Parent=gene-AO052_03940;Dbxref=NCBI_GP:TMQ39596.1;Name=TMQ39596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671596.1;locus_tag=AO052_03940;partial=true;product=aromatic amino acid aminotransferase;protein_id=TMQ39596.1;start_range=.,1;transl_table=11
LNKO01000052.1	Genbank	gene	1056	2144	.	-	.	ID=gene-AO052_03945;Name=AO052_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03945
LNKO01000052.1	Protein Homology	CDS	1056	2144	.	-	0	ID=cds-TMQ39597.1;Parent=gene-AO052_03945;Dbxref=NCBI_GP:TMQ39597.1;Name=TMQ39597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527770.1;locus_tag=AO052_03945;product=phosphoribosylaminoimidazole carboxylase;protein_id=TMQ39597.1;transl_table=11
LNKO01000052.1	Genbank	gene	2214	2708	.	-	.	ID=gene-AO052_03950;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AO052_03950
LNKO01000052.1	Protein Homology	CDS	2214	2708	.	-	0	ID=cds-TMQ39598.1;Parent=gene-AO052_03950;Dbxref=NCBI_GP:TMQ39598.1;Name=TMQ39598.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525981.1;locus_tag=AO052_03950;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=TMQ39598.1;transl_table=11
LNKO01000052.1	Genbank	gene	3172	3822	.	-	.	ID=gene-AO052_03955;Name=AO052_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03955
LNKO01000052.1	Protein Homology	CDS	3172	3822	.	-	0	ID=cds-TMQ39599.1;Parent=gene-AO052_03955;Dbxref=NCBI_GP:TMQ39599.1;Name=TMQ39599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525980.1;locus_tag=AO052_03955;product=fimbrial protein;protein_id=TMQ39599.1;transl_table=11
LNKO01000052.1	Genbank	gene	4293	4991	.	+	.	ID=gene-AO052_03960;Name=AO052_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03960
LNKO01000052.1	Protein Homology	CDS	4293	4991	.	+	0	ID=cds-TMQ39600.1;Parent=gene-AO052_03960;Dbxref=NCBI_GP:TMQ39600.1;Name=TMQ39600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525979.1;locus_tag=AO052_03960;product=molecular chaperone;protein_id=TMQ39600.1;transl_table=11
LNKO01000052.1	Genbank	gene	5121	7634	.	+	.	ID=gene-AO052_03965;Name=AO052_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03965
LNKO01000052.1	Protein Homology	CDS	5121	7634	.	+	0	ID=cds-TMQ39601.1;Parent=gene-AO052_03965;Dbxref=NCBI_GP:TMQ39601.1;Name=TMQ39601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527766.1;locus_tag=AO052_03965;product=usher protein;protein_id=TMQ39601.1;transl_table=11
LNKO01000052.1	Genbank	gene	7648	8313	.	+	.	ID=gene-AO052_03970;Name=AO052_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03970
LNKO01000052.1	Protein Homology	CDS	7648	8313	.	+	0	ID=cds-TMQ39602.1;Parent=gene-AO052_03970;Dbxref=NCBI_GP:TMQ39602.1;Name=TMQ39602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525977.1;locus_tag=AO052_03970;product=fimbrial protein;protein_id=TMQ39602.1;transl_table=11
LNKO01000052.1	Genbank	gene	8337	9629	.	+	.	ID=gene-AO052_03975;Name=AO052_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03975
LNKO01000052.1	Protein Homology	CDS	8337	9629	.	+	0	ID=cds-TMQ39603.1;Parent=gene-AO052_03975;Dbxref=NCBI_GP:TMQ39603.1;Name=TMQ39603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525976.1;locus_tag=AO052_03975;product=pilus assembly protein PilC;protein_id=TMQ39603.1;transl_table=11
LNKO01000052.1	Genbank	gene	9729	10268	.	+	.	ID=gene-AO052_03980;Name=AO052_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03980
LNKO01000052.1	Protein Homology	CDS	9729	10268	.	+	0	ID=cds-TMQ39604.1;Parent=gene-AO052_03980;Dbxref=NCBI_GP:TMQ39604.1;Name=TMQ39604.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661327.1;locus_tag=AO052_03980;product=hypoxanthine phosphoribosyltransferase;protein_id=TMQ39604.1;transl_table=11
LNKO01000052.1	Genbank	gene	10325	10792	.	-	.	ID=gene-AO052_03985;Name=AO052_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03985
LNKO01000052.1	Protein Homology	CDS	10325	10792	.	-	0	ID=cds-TMQ39605.1;Parent=gene-AO052_03985;Dbxref=NCBI_GP:TMQ39605.1;Name=TMQ39605.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272410.1;locus_tag=AO052_03985;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=TMQ39605.1;transl_table=11
LNKO01000052.1	Genbank	gene	11041	12771	.	-	.	ID=gene-AO052_03990;Name=AO052_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03990
LNKO01000052.1	Protein Homology	CDS	11041	12771	.	-	0	ID=cds-TMQ39606.1;Parent=gene-AO052_03990;Dbxref=NCBI_GP:TMQ39606.1;Name=TMQ39606.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526054.1;locus_tag=AO052_03990;product=amino acid ABC transporter ATP-binding protein;protein_id=TMQ39606.1;transl_table=11
LNKO01000052.1	Genbank	gene	12771	14531	.	-	.	ID=gene-AO052_03995;Name=AO052_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_03995
LNKO01000052.1	Protein Homology	CDS	12771	14531	.	-	0	ID=cds-TMQ39607.1;Parent=gene-AO052_03995;Dbxref=NCBI_GP:TMQ39607.1;Name=TMQ39607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054470.1;locus_tag=AO052_03995;product=cysteine ABC transporter ATP-binding protein;protein_id=TMQ39607.1;transl_table=11
LNKO01000052.1	Genbank	gene	14594	15550	.	-	.	ID=gene-AO052_04000;Name=AO052_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04000
LNKO01000052.1	Protein Homology	CDS	14594	15550	.	-	0	ID=cds-TMQ39608.1;Parent=gene-AO052_04000;Dbxref=NCBI_GP:TMQ39608.1;Name=TMQ39608.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526052.1;locus_tag=AO052_04000;product=thioredoxin reductase;protein_id=TMQ39608.1;transl_table=11
LNKO01000052.1	Genbank	gene	15624	16481	.	-	.	ID=gene-AO052_04005;Name=AO052_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04005
LNKO01000052.1	Protein Homology	CDS	15624	16481	.	-	0	ID=cds-TMQ39609.1;Parent=gene-AO052_04005;Dbxref=NCBI_GP:TMQ39609.1;Name=TMQ39609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702090.1;locus_tag=AO052_04005;product=co-chaperone YbbN;protein_id=TMQ39609.1;transl_table=11
LNKO01000052.1	Genbank	gene	16555	17526	.	-	.	ID=gene-AO052_04010;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AO052_04010
LNKO01000052.1	Protein Homology	CDS	16555	17526	.	-	0	ID=cds-TMQ39610.1;Parent=gene-AO052_04010;Dbxref=NCBI_GP:TMQ39610.1;Name=TMQ39610.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996518.1;locus_tag=AO052_04010;product=ferrochelatase;protein_id=TMQ39610.1;transl_table=11
LNKO01000052.1	Genbank	gene	17523	17939	.	-	.	ID=gene-AO052_04015;Name=AO052_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04015
LNKO01000052.1	Protein Homology	CDS	17523	17939	.	-	0	ID=cds-TMQ39611.1;Parent=gene-AO052_04015;Dbxref=NCBI_GP:TMQ39611.1;Name=TMQ39611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996517.1;locus_tag=AO052_04015;product=esterase;protein_id=TMQ39611.1;transl_table=11
LNKO01000052.1	Genbank	gene	18470	18871	.	-	.	ID=gene-AO052_04020;Name=AO052_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04020
LNKO01000052.1	Protein Homology	CDS	18470	18871	.	-	0	ID=cds-TMQ39612.1;Parent=gene-AO052_04020;Dbxref=NCBI_GP:TMQ39612.1;Name=TMQ39612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691118.1;locus_tag=AO052_04020;product=hypothetical protein;protein_id=TMQ39612.1;transl_table=11
LNKO01000052.1	Genbank	gene	19207	22290	.	-	.	ID=gene-AO052_04025;Name=AO052_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04025
LNKO01000052.1	Protein Homology	CDS	19207	22290	.	-	0	ID=cds-TMQ39613.1;Parent=gene-AO052_04025;Dbxref=NCBI_GP:TMQ39613.1;Name=TMQ39613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630418.1;locus_tag=AO052_04025;product=hypothetical protein;protein_id=TMQ39613.1;transl_table=11
LNKO01000052.1	Genbank	gene	22676	23722	.	+	.	ID=gene-AO052_04030;Name=AO052_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04030
LNKO01000052.1	Protein Homology	CDS	22676	23722	.	+	0	ID=cds-TMQ39614.1;Parent=gene-AO052_04030;Dbxref=NCBI_GP:TMQ39614.1;Name=TMQ39614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526046.1;locus_tag=AO052_04030;product=hypothetical protein;protein_id=TMQ39614.1;transl_table=11
LNKO01000052.1	Genbank	gene	23873	24196	.	+	.	ID=gene-AO052_04035;Name=AO052_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04035
LNKO01000052.1	Protein Homology	CDS	23873	24196	.	+	0	ID=cds-TMQ39615.1;Parent=gene-AO052_04035;Dbxref=NCBI_GP:TMQ39615.1;Name=TMQ39615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627223.1;locus_tag=AO052_04035;product=glutaredoxin;protein_id=TMQ39615.1;transl_table=11
LNKO01000052.1	Genbank	gene	24272	25372	.	-	.	ID=gene-AO052_04040;Name=AO052_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04040
LNKO01000052.1	Protein Homology	CDS	24272	25372	.	-	0	ID=cds-TMQ39616.1;Parent=gene-AO052_04040;Dbxref=NCBI_GP:TMQ39616.1;Name=TMQ39616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657196.1;locus_tag=AO052_04040;product=aspartate aminotransferase;protein_id=TMQ39616.1;transl_table=11
LNKO01000052.1	Genbank	gene	25460	26548	.	-	.	ID=gene-AO052_04045;Name=AO052_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04045
LNKO01000052.1	Protein Homology	CDS	25460	26548	.	-	0	ID=cds-TMQ39617.1;Parent=gene-AO052_04045;Dbxref=NCBI_GP:TMQ39617.1;Name=TMQ39617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702096.1;locus_tag=AO052_04045;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=TMQ39617.1;transl_table=11
LNKO01000052.1	Genbank	gene	26739	27083	.	+	.	ID=gene-AO052_04050;Name=AO052_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04050
LNKO01000052.1	Protein Homology	CDS	26739	27083	.	+	0	ID=cds-TMQ39618.1;Parent=gene-AO052_04050;Dbxref=NCBI_GP:TMQ39618.1;Name=TMQ39618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689309.1;locus_tag=AO052_04050;product=hypothetical protein;protein_id=TMQ39618.1;transl_table=11
LNKO01000052.1	Genbank	gene	27123	27689	.	-	.	ID=gene-AO052_04055;Name=AO052_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04055
LNKO01000052.1	Protein Homology	CDS	27123	27689	.	-	0	ID=cds-TMQ39619.1;Parent=gene-AO052_04055;Dbxref=NCBI_GP:TMQ39619.1;Name=TMQ39619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686486.1;locus_tag=AO052_04055;product=hypothetical protein;protein_id=TMQ39619.1;transl_table=11
LNKO01000052.1	Genbank	gene	27689	28675	.	-	.	ID=gene-AO052_04060;Name=AO052_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04060
LNKO01000052.1	Protein Homology	CDS	27689	28675	.	-	0	ID=cds-TMQ39620.1;Parent=gene-AO052_04060;Dbxref=NCBI_GP:TMQ39620.1;Name=TMQ39620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57527.1;locus_tag=AO052_04060;product=aminobenzoate synthetase;protein_id=TMQ39620.1;transl_table=11
LNKO01000052.1	Genbank	gene	28717	29298	.	+	.	ID=gene-AO052_04065;Name=AO052_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04065
LNKO01000052.1	Protein Homology	CDS	28717	29298	.	+	0	ID=cds-TMQ39621.1;Parent=gene-AO052_04065;Dbxref=NCBI_GP:TMQ39621.1;Name=TMQ39621.1;Note=catalyzes the formation of anthranilate from chorismate and glutamine%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667441.1;locus_tag=AO052_04065;product=anthranilate synthase;protein_id=TMQ39621.1;transl_table=11
LNKO01000052.1	Genbank	gene	29383	30537	.	+	.	ID=gene-AO052_04070;Name=AO052_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04070
LNKO01000052.1	Protein Homology	CDS	29383	30537	.	+	0	ID=cds-TMQ39622.1;Parent=gene-AO052_04070;Dbxref=NCBI_GP:TMQ39622.1;Name=TMQ39622.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356717.1;locus_tag=AO052_04070;product=S-adenosylmethionine synthetase;protein_id=TMQ39622.1;transl_table=11
LNKO01000052.1	Genbank	gene	30833	31348	.	+	.	ID=gene-AO052_04075;Name=AO052_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04075
LNKO01000052.1	Protein Homology	CDS	30833	31348	.	+	0	ID=cds-TMQ39623.1;Parent=gene-AO052_04075;Dbxref=NCBI_GP:TMQ39623.1;Name=TMQ39623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996506.1;locus_tag=AO052_04075;product=Zn-dependent metalloprotease;protein_id=TMQ39623.1;transl_table=11
LNKO01000052.1	Genbank	gene	31399	31911	.	+	.	ID=gene-AO052_04080;Name=AO052_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04080
LNKO01000052.1	Protein Homology	CDS	31399	31911	.	+	0	ID=cds-TMQ39624.1;Parent=gene-AO052_04080;Dbxref=NCBI_GP:TMQ39624.1;Name=TMQ39624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702101.1;locus_tag=AO052_04080;product=protein opa;protein_id=TMQ39624.1;transl_table=11
LNKO01000052.1	Protein Homology	pseudogene	32009	35055	.	-	.	ID=gene-AO052_04085;Name=AO052_04085;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04085;pseudo=true
LNKO01000052.1	Genbank	gene	35489	36172	.	-	.	ID=gene-AO052_04090;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AO052_04090
LNKO01000052.1	Protein Homology	CDS	35489	36172	.	-	0	ID=cds-TMQ39625.1;Parent=gene-AO052_04090;Dbxref=NCBI_GP:TMQ39625.1;Name=TMQ39625.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=EXISTENCE: similar to AA sequence:SwissProt:P45089.1;locus_tag=AO052_04090;product=arginine transporter permease subunit ArtM;protein_id=TMQ39625.1;transl_table=11
LNKO01000052.1	Genbank	gene	36172	36837	.	-	.	ID=gene-AO052_04095;Name=AO052_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04095
LNKO01000052.1	Protein Homology	CDS	36172	36837	.	-	0	ID=cds-TMQ39626.1;Parent=gene-AO052_04095;Dbxref=NCBI_GP:TMQ39626.1;Name=TMQ39626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686494.1;locus_tag=AO052_04095;product=ABC transporter;protein_id=TMQ39626.1;transl_table=11
LNKO01000052.1	Genbank	gene	36841	37560	.	-	.	ID=gene-AO052_04100;Name=AO052_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04100
LNKO01000052.1	Protein Homology	CDS	36841	37560	.	-	0	ID=cds-TMQ39627.1;Parent=gene-AO052_04100;Dbxref=NCBI_GP:TMQ39627.1;Name=TMQ39627.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702104.1;locus_tag=AO052_04100;product=arginine ABC transporter substrate-binding protein;protein_id=TMQ39627.1;transl_table=11
LNKO01000052.1	Genbank	gene	37578	38309	.	-	.	ID=gene-AO052_04105;Name=AO052_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04105
LNKO01000052.1	Protein Homology	CDS	37578	38309	.	-	0	ID=cds-TMQ39628.1;Parent=gene-AO052_04105;Dbxref=NCBI_GP:TMQ39628.1;Name=TMQ39628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691139.1;locus_tag=AO052_04105;product=arginine ABC transporter ATP-binding protein;protein_id=TMQ39628.1;transl_table=11
LNKO01000052.1	Genbank	gene	38435	39019	.	-	.	ID=gene-AO052_04110;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AO052_04110
LNKO01000052.1	Protein Homology	CDS	38435	39019	.	-	0	ID=cds-TMQ39629.1;Parent=gene-AO052_04110;Dbxref=NCBI_GP:TMQ39629.1;Name=TMQ39629.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526033.1;locus_tag=AO052_04110;product=phosphoheptose isomerase;protein_id=TMQ39629.1;transl_table=11
LNKO01000052.1	Genbank	gene	39226	40032	.	+	.	ID=gene-AO052_04115;Name=AO052_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04115
LNKO01000052.1	Protein Homology	CDS	39226	40032	.	+	0	ID=cds-TMQ39630.1;Parent=gene-AO052_04115;Dbxref=NCBI_GP:TMQ39630.1;Name=TMQ39630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526032.1;locus_tag=AO052_04115;product=ATP-dependent DNA ligase;protein_id=TMQ39630.1;transl_table=11
LNKO01000052.1	Genbank	gene	40061	41044	.	-	.	ID=gene-AO052_04120;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AO052_04120
LNKO01000052.1	Protein Homology	CDS	40061	41044	.	-	0	ID=cds-TMQ39631.1;Parent=gene-AO052_04120;Dbxref=NCBI_GP:TMQ39631.1;Name=TMQ39631.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766871.1;locus_tag=AO052_04120;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ39631.1;transl_table=11
LNKO01000052.1	Genbank	gene	41047	42039	.	-	.	ID=gene-AO052_04125;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AO052_04125
LNKO01000052.1	Protein Homology	CDS	41047	42039	.	-	0	ID=cds-TMQ39632.1;Parent=gene-AO052_04125;Dbxref=NCBI_GP:TMQ39632.1;Name=TMQ39632.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766872.1;locus_tag=AO052_04125;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ39632.1;transl_table=11
LNKO01000052.1	Genbank	gene	42049	42936	.	-	.	ID=gene-AO052_04130;Name=AO052_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04130
LNKO01000052.1	Protein Homology	CDS	42049	42936	.	-	0	ID=cds-TMQ39633.1;Parent=gene-AO052_04130;Dbxref=NCBI_GP:TMQ39633.1;Name=TMQ39633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526030.1;locus_tag=AO052_04130;product=peptide transporter;protein_id=TMQ39633.1;transl_table=11
LNKO01000052.1	Genbank	gene	42951	43952	.	-	.	ID=gene-AO052_04135;Name=AO052_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04135
LNKO01000052.1	Protein Homology	CDS	42951	43952	.	-	0	ID=cds-TMQ39634.1;Parent=gene-AO052_04135;Dbxref=NCBI_GP:TMQ39634.1;Name=TMQ39634.1;Note=transports peptides consisting of two or three amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869147.1;locus_tag=AO052_04135;product=peptide ABC transporter permease;protein_id=TMQ39634.1;transl_table=11
LNKO01000052.1	Genbank	gene	44042	46222	.	-	.	ID=gene-AO052_04140;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=AO052_04140
LNKO01000052.1	Protein Homology	CDS	44042	46222	.	-	0	ID=cds-TMQ39644.1;Parent=gene-AO052_04140;Dbxref=NCBI_GP:TMQ39644.1;Name=TMQ39644.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702108.1;locus_tag=AO052_04140;product=DNA helicase II;protein_id=TMQ39644.1;transl_table=11
LNKO01000052.1	Genbank	gene	46209	46442	.	-	.	ID=gene-AO052_04145;Name=AO052_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04145
LNKO01000052.1	Protein Homology	CDS	46209	46442	.	-	0	ID=cds-TMQ39635.1;Parent=gene-AO052_04145;Dbxref=NCBI_GP:TMQ39635.1;Name=TMQ39635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647470.1;locus_tag=AO052_04145;product=branched-chain amino acid aminotransferase;protein_id=TMQ39635.1;transl_table=11
LNKO01000052.1	Genbank	gene	46837	47466	.	-	.	ID=gene-AO052_04150;Name=AO052_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04150
LNKO01000052.1	Protein Homology	CDS	46837	47466	.	-	0	ID=cds-TMQ39645.1;Parent=gene-AO052_04150;Dbxref=NCBI_GP:TMQ39645.1;Name=TMQ39645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702109.1;locus_tag=AO052_04150;product=radical SAM protein;protein_id=TMQ39645.1;transl_table=11
LNKO01000052.1	Genbank	gene	47473	47898	.	-	.	ID=gene-AO052_04155;Name=AO052_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04155
LNKO01000052.1	Protein Homology	CDS	47473	47898	.	-	0	ID=cds-TMQ39636.1;Parent=gene-AO052_04155;Dbxref=NCBI_GP:TMQ39636.1;Name=TMQ39636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272433.1;locus_tag=AO052_04155;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=TMQ39636.1;transl_table=11
LNKO01000052.1	Genbank	gene	47891	48574	.	-	.	ID=gene-AO052_04160;Name=AO052_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04160
LNKO01000052.1	Protein Homology	CDS	47891	48574	.	-	0	ID=cds-TMQ39637.1;Parent=gene-AO052_04160;Dbxref=NCBI_GP:TMQ39637.1;Name=TMQ39637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLA8.1;locus_tag=AO052_04160;product=7-cyano-7-deazaguanine synthase;protein_id=TMQ39637.1;transl_table=11
LNKO01000052.1	Genbank	gene	48731	48874	.	+	.	ID=gene-AO052_04165;Name=AO052_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04165
LNKO01000052.1	Protein Homology	CDS	48731	48874	.	+	0	ID=cds-TMQ39638.1;Parent=gene-AO052_04165;Dbxref=NCBI_GP:TMQ39638.1;Name=TMQ39638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44125.1;locus_tag=AO052_04165;product=hypothetical protein;protein_id=TMQ39638.1;transl_table=11
LNKO01000052.1	Genbank	gene	48925	49956	.	-	.	ID=gene-AO052_04170;Name=AO052_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04170
LNKO01000052.1	Protein Homology	CDS	48925	49956	.	-	0	ID=cds-TMQ39639.1;Parent=gene-AO052_04170;Dbxref=NCBI_GP:TMQ39639.1;Name=TMQ39639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702114.1;locus_tag=AO052_04170;product=branched chain amino acid aminotransferase;protein_id=TMQ39639.1;transl_table=11
LNKO01000052.1	Genbank	gene	50431	51324	.	+	.	ID=gene-AO052_04175;Name=AO052_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04175
LNKO01000052.1	Protein Homology	CDS	50431	51324	.	+	0	ID=cds-TMQ39640.1;Parent=gene-AO052_04175;Dbxref=NCBI_GP:TMQ39640.1;Name=TMQ39640.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691154.1;locus_tag=AO052_04175;product=transcriptional regulator;protein_id=TMQ39640.1;transl_table=11
LNKO01000052.1	Genbank	gene	51317	52408	.	+	.	ID=gene-AO052_04180;Name=AO052_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04180
LNKO01000052.1	Protein Homology	CDS	51317	52408	.	+	0	ID=cds-TMQ39641.1;Parent=gene-AO052_04180;Dbxref=NCBI_GP:TMQ39641.1;Name=TMQ39641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45100.1;locus_tag=AO052_04180;product=rRNA methyltransferase;protein_id=TMQ39641.1;transl_table=11
LNKO01000052.1	Genbank	gene	52444	53613	.	+	.	ID=gene-AO052_04185;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AO052_04185
LNKO01000052.1	Protein Homology	CDS	52444	53613	.	+	0	ID=cds-TMQ39642.1;Parent=gene-AO052_04185;Dbxref=NCBI_GP:TMQ39642.1;Name=TMQ39642.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550899.1;locus_tag=AO052_04185;product=succinyl-CoA synthetase subunit beta;protein_id=TMQ39642.1;transl_table=11
LNKO01000052.1	Genbank	gene	53613	54494	.	+	.	ID=gene-AO052_04190;Name=AO052_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04190
LNKO01000052.1	Protein Homology	CDS	53613	54494	.	+	0	ID=cds-TMQ39643.1;Parent=gene-AO052_04190;Dbxref=NCBI_GP:TMQ39643.1;Name=TMQ39643.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526023.1;locus_tag=AO052_04190;product=succinyl-CoA synthetase subunit alpha;protein_id=TMQ39643.1;transl_table=11
##sequence-region LNKO01000053.1 1 4720
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000053.1	Genbank	region	1	4720	.	+	.	ID=LNKO01000053.1:1..4720;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000053.1	Genbank	gene	12	590	.	+	.	ID=gene-AO052_04195;Name=AO052_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04195
LNKO01000053.1	Protein Homology	CDS	12	590	.	+	0	ID=cds-TMQ39550.1;Parent=gene-AO052_04195;Dbxref=NCBI_GP:TMQ39550.1;Name=TMQ39550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500037.1;locus_tag=AO052_04195;product=threonylcarbamoyl-AMP synthase;protein_id=TMQ39550.1;transl_table=11
LNKO01000053.1	Genbank	gene	638	1711	.	+	.	ID=gene-AO052_04200;Name=AO052_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04200
LNKO01000053.1	Protein Homology	CDS	638	1711	.	+	0	ID=cds-TMQ39546.1;Parent=gene-AO052_04200;Dbxref=NCBI_GP:TMQ39546.1;Name=TMQ39546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653704.1;locus_tag=AO052_04200;product=ribosomal large subunit pseudouridine synthase B;protein_id=TMQ39546.1;transl_table=11
LNKO01000053.1	Genbank	gene	1722	2693	.	+	.	ID=gene-AO052_04205;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AO052_04205
LNKO01000053.1	Protein Homology	CDS	1722	2693	.	+	0	ID=cds-TMQ39547.1;Parent=gene-AO052_04205;Dbxref=NCBI_GP:TMQ39547.1;Name=TMQ39547.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660454.1;locus_tag=AO052_04205;product=LysR family transcriptional regulator;protein_id=TMQ39547.1;transl_table=11
LNKO01000053.1	Genbank	gene	2752	3696	.	-	.	ID=gene-AO052_04210;Name=AO052_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04210
LNKO01000053.1	Protein Homology	CDS	2752	3696	.	-	0	ID=cds-TMQ39548.1;Parent=gene-AO052_04210;Dbxref=NCBI_GP:TMQ39548.1;Name=TMQ39548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996489.1;locus_tag=AO052_04210;product=protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific;protein_id=TMQ39548.1;transl_table=11
LNKO01000053.1	Genbank	gene	3827	4330	.	+	.	ID=gene-AO052_04215;Name=AO052_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04215
LNKO01000053.1	Protein Homology	CDS	3827	4330	.	+	0	ID=cds-TMQ39549.1;Parent=gene-AO052_04215;Dbxref=NCBI_GP:TMQ39549.1;Name=TMQ39549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44126.1;locus_tag=AO052_04215;product=hypothetical protein;protein_id=TMQ39549.1;transl_table=11
LNKO01000053.1	Genbank	pseudogene	4406	4720	.	-	.	ID=gene-AO052_04220;Name=AO052_04220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04220;pseudo=true
LNKO01000053.1	GeneMarkS+	CDS	4406	4720	.	-	0	ID=cds-AO052_04220;Parent=gene-AO052_04220;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_04220;pseudo=true;transl_table=11
##sequence-region LNKO01000054.1 1 20468
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000054.1	Genbank	region	1	20468	.	+	.	ID=LNKO01000054.1:1..20468;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000054.1	Genbank	gene	1	1822	.	-	.	ID=gene-AO052_04225;Name=AO052_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04225;partial=true;start_range=.,1
LNKO01000054.1	Protein Homology	CDS	1	1822	.	-	0	ID=cds-TMQ39516.1;Parent=gene-AO052_04225;Dbxref=NCBI_GP:TMQ39516.1;Name=TMQ39516.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356701.1;locus_tag=AO052_04225;partial=true;product=phosphate acetyltransferase;protein_id=TMQ39516.1;start_range=.,1;transl_table=11
LNKO01000054.1	Genbank	gene	1890	3095	.	-	.	ID=gene-AO052_04230;Name=AO052_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04230
LNKO01000054.1	Protein Homology	CDS	1890	3095	.	-	0	ID=cds-TMQ39517.1;Parent=gene-AO052_04230;Dbxref=NCBI_GP:TMQ39517.1;Name=TMQ39517.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670595.1;locus_tag=AO052_04230;product=acetate kinase;protein_id=TMQ39517.1;transl_table=11
LNKO01000054.1	Genbank	gene	3310	3753	.	+	.	ID=gene-AO052_04235;Name=AO052_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04235
LNKO01000054.1	Protein Homology	CDS	3310	3753	.	+	0	ID=cds-TMQ39518.1;Parent=gene-AO052_04235;Dbxref=NCBI_GP:TMQ39518.1;Name=TMQ39518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670593.1;locus_tag=AO052_04235;product=hypothetical protein;protein_id=TMQ39518.1;transl_table=11
LNKO01000054.1	Genbank	gene	3840	4331	.	+	.	ID=gene-AO052_04240;Name=AO052_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04240
LNKO01000054.1	Protein Homology	CDS	3840	4331	.	+	0	ID=cds-TMQ39519.1;Parent=gene-AO052_04240;Dbxref=NCBI_GP:TMQ39519.1;Name=TMQ39519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45108.1;locus_tag=AO052_04240;product=colicin V synthesis protein;protein_id=TMQ39519.1;transl_table=11
LNKO01000054.1	Protein Homology	pseudogene	4342	5864	.	+	.	ID=gene-AO052_04245;Name=AO052_04245;Note=disrupted;description=amidophosphoribosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04245;pseudo=true
LNKO01000054.1	Genbank	gene	5919	6809	.	-	.	ID=gene-AO052_04250;Name=AO052_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04250
LNKO01000054.1	Protein Homology	CDS	5919	6809	.	-	0	ID=cds-TMQ39520.1;Parent=gene-AO052_04250;Dbxref=NCBI_GP:TMQ39520.1;Name=TMQ39520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660470.1;locus_tag=AO052_04250;product=epimerase;protein_id=TMQ39520.1;transl_table=11
LNKO01000054.1	Genbank	gene	6809	7264	.	-	.	ID=gene-AO052_04255;Name=AO052_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04255
LNKO01000054.1	Protein Homology	CDS	6809	7264	.	-	0	ID=cds-TMQ39521.1;Parent=gene-AO052_04255;Dbxref=NCBI_GP:TMQ39521.1;Name=TMQ39521.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526014.1;locus_tag=AO052_04255;product=arginine repressor;protein_id=TMQ39521.1;transl_table=11
LNKO01000054.1	Genbank	gene	7471	8406	.	+	.	ID=gene-AO052_04260;Name=AO052_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04260
LNKO01000054.1	Protein Homology	CDS	7471	8406	.	+	0	ID=cds-TMQ39522.1;Parent=gene-AO052_04260;Dbxref=NCBI_GP:TMQ39522.1;Name=TMQ39522.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL89.1;locus_tag=AO052_04260;product=malate dehydrogenase;protein_id=TMQ39522.1;transl_table=11
LNKO01000054.1	Genbank	gene	8491	9999	.	-	.	ID=gene-AO052_04265;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AO052_04265
LNKO01000054.1	Protein Homology	CDS	8491	9999	.	-	0	ID=cds-TMQ39523.1;Parent=gene-AO052_04265;Dbxref=NCBI_GP:TMQ39523.1;Name=TMQ39523.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCQ0.1;locus_tag=AO052_04265;product=lysine--tRNA ligase;protein_id=TMQ39523.1;transl_table=11
LNKO01000054.1	Genbank	gene	10151	11041	.	-	.	ID=gene-AO052_04270;Name=AO052_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04270
LNKO01000054.1	Protein Homology	CDS	10151	11041	.	-	0	ID=cds-TMQ39524.1;Parent=gene-AO052_04270;Dbxref=NCBI_GP:TMQ39524.1;Name=TMQ39524.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538332.1;locus_tag=AO052_04270;product=peptide chain release factor 2;protein_id=TMQ39524.1;transl_table=11
LNKO01000054.1	Genbank	gene	11382	12071	.	+	.	ID=gene-AO052_04275;Name=AO052_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04275
LNKO01000054.1	Protein Homology	CDS	11382	12071	.	+	0	ID=cds-TMQ39525.1;Parent=gene-AO052_04275;Dbxref=NCBI_GP:TMQ39525.1;Name=TMQ39525.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996480.1;locus_tag=AO052_04275;product=protein-disulfide isomerase;protein_id=TMQ39525.1;transl_table=11
LNKO01000054.1	Genbank	gene	12359	14086	.	+	.	ID=gene-AO052_04280;Name=AO052_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04280
LNKO01000054.1	Protein Homology	CDS	12359	14086	.	+	0	ID=cds-TMQ39526.1;Parent=gene-AO052_04280;Dbxref=NCBI_GP:TMQ39526.1;Name=TMQ39526.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657100.1;locus_tag=AO052_04280;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TMQ39526.1;transl_table=11
LNKO01000054.1	Genbank	gene	14079	14786	.	+	.	ID=gene-AO052_04285;Name=AO052_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04285
LNKO01000054.1	Protein Homology	CDS	14079	14786	.	+	0	ID=cds-TMQ39527.1;Parent=gene-AO052_04285;Dbxref=NCBI_GP:TMQ39527.1;Name=TMQ39527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996478.1;locus_tag=AO052_04285;product=hypothetical protein;protein_id=TMQ39527.1;transl_table=11
LNKO01000054.1	Genbank	gene	14783	15472	.	+	.	ID=gene-AO052_04290;Name=AO052_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04290
LNKO01000054.1	Protein Homology	CDS	14783	15472	.	+	0	ID=cds-TMQ39528.1;Parent=gene-AO052_04290;Dbxref=NCBI_GP:TMQ39528.1;Name=TMQ39528.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500022.1;locus_tag=AO052_04290;product=5'-methylthioadenosine nucleosidase;protein_id=TMQ39528.1;transl_table=11
LNKO01000054.1	Genbank	gene	15550	18393	.	-	.	ID=gene-AO052_04295;Name=AO052_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04295
LNKO01000054.1	Protein Homology	CDS	15550	18393	.	-	0	ID=cds-TMQ39529.1;Parent=gene-AO052_04295;Dbxref=NCBI_GP:TMQ39529.1;Name=TMQ39529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526007.1;locus_tag=AO052_04295;product=TonB-dependent receptor;protein_id=TMQ39529.1;transl_table=11
LNKO01000054.1	Genbank	gene	18755	20350	.	-	.	ID=gene-AO052_04300;Name=AO052_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04300
LNKO01000054.1	Protein Homology	CDS	18755	20350	.	-	0	ID=cds-TMQ39530.1;Parent=gene-AO052_04300;Dbxref=NCBI_GP:TMQ39530.1;Name=TMQ39530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694228.1;locus_tag=AO052_04300;product=lactate permease;protein_id=TMQ39530.1;transl_table=11
##sequence-region LNKO01000055.1 1 25481
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000055.1	Genbank	region	1	25481	.	+	.	ID=LNKO01000055.1:1..25481;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000055.1	Genbank	gene	155	250	.	+	.	ID=gene-AO052_04305;Name=AO052_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04305
LNKO01000055.1	Protein Homology	CDS	155	250	.	+	0	ID=cds-TMQ39466.1;Parent=gene-AO052_04305;Dbxref=NCBI_GP:TMQ39466.1;Name=TMQ39466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647386.1;locus_tag=AO052_04305;product=cytidylate kinase;protein_id=TMQ39466.1;transl_table=11
LNKO01000055.1	Genbank	gene	285	1286	.	-	.	ID=gene-AO052_04310;Name=AO052_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04310
LNKO01000055.1	Protein Homology	CDS	285	1286	.	-	0	ID=cds-TMQ39467.1;Parent=gene-AO052_04310;Dbxref=NCBI_GP:TMQ39467.1;Name=TMQ39467.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526005.1;locus_tag=AO052_04310;product=fructose 1%2C6-bisphosphatase;protein_id=TMQ39467.1;transl_table=11
LNKO01000055.1	Genbank	gene	1521	2330	.	+	.	ID=gene-AO052_04315;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=AO052_04315
LNKO01000055.1	Protein Homology	CDS	1521	2330	.	+	0	ID=cds-TMQ39468.1;Parent=gene-AO052_04315;Dbxref=NCBI_GP:TMQ39468.1;Name=TMQ39468.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIY2.1;locus_tag=AO052_04315;product=tRNA pseudouridine synthase A;protein_id=TMQ39468.1;transl_table=11
LNKO01000055.1	Protein Homology	pseudogene	2422	3437	.	-	.	ID=gene-AO052_04320;Name=AO052_04320;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04320;pseudo=true
LNKO01000055.1	Genbank	gene	3449	4261	.	-	.	ID=gene-AO052_04325;Name=AO052_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04325
LNKO01000055.1	Protein Homology	CDS	3449	4261	.	-	0	ID=cds-TMQ39469.1;Parent=gene-AO052_04325;Dbxref=NCBI_GP:TMQ39469.1;Name=TMQ39469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527789.1;locus_tag=AO052_04325;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ39469.1;transl_table=11
LNKO01000055.1	Genbank	gene	4261	5310	.	-	.	ID=gene-AO052_04330;Name=AO052_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04330
LNKO01000055.1	Protein Homology	CDS	4261	5310	.	-	0	ID=cds-TMQ39470.1;Parent=gene-AO052_04330;Dbxref=NCBI_GP:TMQ39470.1;Name=TMQ39470.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550879.1;locus_tag=AO052_04330;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ39470.1;transl_table=11
LNKO01000055.1	Genbank	gene	5314	6201	.	-	.	ID=gene-AO052_04335;Name=AO052_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04335
LNKO01000055.1	Protein Homology	CDS	5314	6201	.	-	0	ID=cds-TMQ39471.1;Parent=gene-AO052_04335;Dbxref=NCBI_GP:TMQ39471.1;Name=TMQ39471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689227.1;locus_tag=AO052_04335;product=peptide ABC transporter permease;protein_id=TMQ39471.1;transl_table=11
LNKO01000055.1	Genbank	gene	6191	7156	.	-	.	ID=gene-AO052_04340;Name=AO052_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04340
LNKO01000055.1	Protein Homology	CDS	6191	7156	.	-	0	ID=cds-TMQ39472.1;Parent=gene-AO052_04340;Dbxref=NCBI_GP:TMQ39472.1;Name=TMQ39472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45286.1;locus_tag=AO052_04340;product=peptide ABC transporter permease;protein_id=TMQ39472.1;transl_table=11
LNKO01000055.1	Genbank	gene	7156	8850	.	-	.	ID=gene-AO052_04345;Name=AO052_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04345
LNKO01000055.1	Protein Homology	CDS	7156	8850	.	-	0	ID=cds-TMQ39473.1;Parent=gene-AO052_04345;Dbxref=NCBI_GP:TMQ39473.1;Name=TMQ39473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45285.1;locus_tag=AO052_04345;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ39473.1;transl_table=11
LNKO01000055.1	Genbank	gene	8920	10332	.	+	.	ID=gene-AO052_04350;Name=AO052_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04350
LNKO01000055.1	Protein Homology	CDS	8920	10332	.	+	0	ID=cds-TMQ39474.1;Parent=gene-AO052_04350;Dbxref=NCBI_GP:TMQ39474.1;Name=TMQ39474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44280.1;locus_tag=AO052_04350;product=hypothetical protein;protein_id=TMQ39474.1;transl_table=11
LNKO01000055.1	Genbank	gene	10370	13009	.	-	.	ID=gene-AO052_04355;Name=AO052_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04355
LNKO01000055.1	Protein Homology	CDS	10370	13009	.	-	0	ID=cds-TMQ39475.1;Parent=gene-AO052_04355;Dbxref=NCBI_GP:TMQ39475.1;Name=TMQ39475.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43920.1;locus_tag=AO052_04355;product=phosphoenolpyruvate carboxylase;protein_id=TMQ39475.1;transl_table=11
LNKO01000055.1	Genbank	gene	13192	14202	.	-	.	ID=gene-AO052_04360;Name=AO052_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04360
LNKO01000055.1	Protein Homology	CDS	13192	14202	.	-	0	ID=cds-TMQ39476.1;Parent=gene-AO052_04360;Dbxref=NCBI_GP:TMQ39476.1;Name=TMQ39476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL70.1;locus_tag=AO052_04360;product=transcriptional regulator;protein_id=TMQ39476.1;transl_table=11
LNKO01000055.1	Genbank	gene	14562	15389	.	+	.	ID=gene-AO052_04365;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AO052_04365
LNKO01000055.1	Protein Homology	CDS	14562	15389	.	+	0	ID=cds-TMQ39477.1;Parent=gene-AO052_04365;Dbxref=NCBI_GP:TMQ39477.1;Name=TMQ39477.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702447.1;locus_tag=AO052_04365;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=TMQ39477.1;transl_table=11
LNKO01000055.1	Genbank	gene	15447	16745	.	-	.	ID=gene-AO052_04370;Name=AO052_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04370
LNKO01000055.1	Protein Homology	CDS	15447	16745	.	-	0	ID=cds-TMQ39478.1;Parent=gene-AO052_04370;Dbxref=NCBI_GP:TMQ39478.1;Name=TMQ39478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45283.2;locus_tag=AO052_04370;product=adenylosuccinate synthetase;protein_id=TMQ39478.1;transl_table=11
LNKO01000055.1	Genbank	gene	16874	17239	.	-	.	ID=gene-AO052_04375;Name=AO052_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04375
LNKO01000055.1	Protein Homology	CDS	16874	17239	.	-	0	ID=cds-TMQ39479.1;Parent=gene-AO052_04375;Dbxref=NCBI_GP:TMQ39479.1;Name=TMQ39479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691218.1;locus_tag=AO052_04375;product=aspartate kinase;protein_id=TMQ39479.1;transl_table=11
LNKO01000055.1	Genbank	gene	17547	17623	.	+	.	ID=gene-AO052_04380;Name=AO052_04380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_04380
LNKO01000055.1	tRNAscan-SE	tRNA	17547	17623	.	+	.	ID=rna-AO052_04380;Parent=gene-AO052_04380;anticodon=(pos:17581..17583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04380;product=tRNA-Met
LNKO01000055.1	tRNAscan-SE	exon	17547	17623	.	+	.	ID=exon-AO052_04380-1;Parent=rna-AO052_04380;anticodon=(pos:17581..17583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04380;product=tRNA-Met
LNKO01000055.1	Genbank	gene	17629	17713	.	+	.	ID=gene-AO052_04385;Name=AO052_04385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_04385
LNKO01000055.1	tRNAscan-SE	tRNA	17629	17713	.	+	.	ID=rna-AO052_04385;Parent=gene-AO052_04385;anticodon=(pos:17663..17665);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04385;product=tRNA-Leu
LNKO01000055.1	tRNAscan-SE	exon	17629	17713	.	+	.	ID=exon-AO052_04385-1;Parent=rna-AO052_04385;anticodon=(pos:17663..17665);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04385;product=tRNA-Leu
LNKO01000055.1	Genbank	gene	17742	17816	.	+	.	ID=gene-AO052_04390;Name=AO052_04390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_04390
LNKO01000055.1	tRNAscan-SE	tRNA	17742	17816	.	+	.	ID=rna-AO052_04390;Parent=gene-AO052_04390;anticodon=(pos:17774..17776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04390;product=tRNA-Gln
LNKO01000055.1	tRNAscan-SE	exon	17742	17816	.	+	.	ID=exon-AO052_04390-1;Parent=rna-AO052_04390;anticodon=(pos:17774..17776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04390;product=tRNA-Gln
LNKO01000055.1	Genbank	gene	17864	17938	.	+	.	ID=gene-AO052_04395;Name=AO052_04395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_04395
LNKO01000055.1	tRNAscan-SE	tRNA	17864	17938	.	+	.	ID=rna-AO052_04395;Parent=gene-AO052_04395;anticodon=(pos:17896..17898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04395;product=tRNA-Gln
LNKO01000055.1	tRNAscan-SE	exon	17864	17938	.	+	.	ID=exon-AO052_04395-1;Parent=rna-AO052_04395;anticodon=(pos:17896..17898);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_04395;product=tRNA-Gln
LNKO01000055.1	Genbank	gene	18092	18379	.	-	.	ID=gene-AO052_04400;Name=AO052_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04400
LNKO01000055.1	Protein Homology	CDS	18092	18379	.	-	0	ID=cds-TMQ39480.1;Parent=gene-AO052_04400;Dbxref=NCBI_GP:TMQ39480.1;Name=TMQ39480.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625668.1;locus_tag=AO052_04400;product=50S ribosomal protein L25;protein_id=TMQ39480.1;transl_table=11
LNKO01000055.1	Genbank	gene	18598	19203	.	+	.	ID=gene-AO052_04405;Name=AO052_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04405
LNKO01000055.1	Protein Homology	CDS	18598	19203	.	+	0	ID=cds-TMQ39481.1;Parent=gene-AO052_04405;Dbxref=NCBI_GP:TMQ39481.1;Name=TMQ39481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996462.1;locus_tag=AO052_04405;product=alpha-amylase;protein_id=TMQ39481.1;transl_table=11
LNKO01000055.1	Genbank	gene	19250	19654	.	-	.	ID=gene-AO052_04410;Name=AO052_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04410
LNKO01000055.1	Protein Homology	CDS	19250	19654	.	-	0	ID=cds-TMQ39482.1;Parent=gene-AO052_04410;Dbxref=NCBI_GP:TMQ39482.1;Name=TMQ39482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638031.1;locus_tag=AO052_04410;product=hypothetical protein;protein_id=TMQ39482.1;transl_table=11
LNKO01000055.1	Genbank	gene	19685	20035	.	-	.	ID=gene-AO052_04415;Name=AO052_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04415
LNKO01000055.1	Protein Homology	CDS	19685	20035	.	-	0	ID=cds-TMQ39483.1;Parent=gene-AO052_04415;Dbxref=NCBI_GP:TMQ39483.1;Name=TMQ39483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996461.1;locus_tag=AO052_04415;product=aminoacrylate peracid reductase;protein_id=TMQ39483.1;transl_table=11
LNKO01000055.1	Genbank	gene	20147	20863	.	+	.	ID=gene-AO052_04420;Name=AO052_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04420
LNKO01000055.1	Protein Homology	CDS	20147	20863	.	+	0	ID=cds-TMQ39484.1;Parent=gene-AO052_04420;Dbxref=NCBI_GP:TMQ39484.1;Name=TMQ39484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525991.1;locus_tag=AO052_04420;product=hypothetical protein;protein_id=TMQ39484.1;transl_table=11
LNKO01000055.1	Genbank	gene	20864	21406	.	+	.	ID=gene-AO052_04425;Name=AO052_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04425
LNKO01000055.1	Protein Homology	CDS	20864	21406	.	+	0	ID=cds-TMQ39485.1;Parent=gene-AO052_04425;Dbxref=NCBI_GP:TMQ39485.1;Name=TMQ39485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667296.1;locus_tag=AO052_04425;product=hypothetical protein;protein_id=TMQ39485.1;transl_table=11
LNKO01000055.1	Genbank	gene	21421	21828	.	-	.	ID=gene-AO052_04430;Name=AO052_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04430
LNKO01000055.1	Protein Homology	CDS	21421	21828	.	-	0	ID=cds-TMQ39486.1;Parent=gene-AO052_04430;Dbxref=NCBI_GP:TMQ39486.1;Name=TMQ39486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629049.1;locus_tag=AO052_04430;product=MerR family transcriptional regulator;protein_id=TMQ39486.1;transl_table=11
LNKO01000055.1	Genbank	gene	21918	22601	.	+	.	ID=gene-AO052_04435;Name=AO052_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04435
LNKO01000055.1	Protein Homology	CDS	21918	22601	.	+	0	ID=cds-TMQ39487.1;Parent=gene-AO052_04435;Dbxref=NCBI_GP:TMQ39487.1;Name=TMQ39487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629048.1;locus_tag=AO052_04435;product=hypothetical protein;protein_id=TMQ39487.1;transl_table=11
LNKO01000055.1	Genbank	gene	22614	23099	.	+	.	ID=gene-AO052_04440;Name=AO052_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04440
LNKO01000055.1	Protein Homology	CDS	22614	23099	.	+	0	ID=cds-TMQ39488.1;Parent=gene-AO052_04440;Dbxref=NCBI_GP:TMQ39488.1;Name=TMQ39488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638020.1;locus_tag=AO052_04440;product=hypothetical protein;protein_id=TMQ39488.1;transl_table=11
LNKO01000055.1	Genbank	gene	23099	23719	.	+	.	ID=gene-AO052_04445;Name=AO052_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04445
LNKO01000055.1	Protein Homology	CDS	23099	23719	.	+	0	ID=cds-TMQ39489.1;Parent=gene-AO052_04445;Dbxref=NCBI_GP:TMQ39489.1;Name=TMQ39489.1;Note=catalyzes the ATP-dependent transport of cobalt;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525986.1;locus_tag=AO052_04445;product=cobalamin biosynthesis protein CbiM;protein_id=TMQ39489.1;transl_table=11
LNKO01000055.1	Genbank	gene	23719	24351	.	+	.	ID=gene-AO052_04450;Name=AO052_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04450
LNKO01000055.1	Protein Homology	CDS	23719	24351	.	+	0	ID=cds-TMQ39490.1;Parent=gene-AO052_04450;Dbxref=NCBI_GP:TMQ39490.1;Name=TMQ39490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702436.1;locus_tag=AO052_04450;product=ABC transporter permease;protein_id=TMQ39490.1;transl_table=11
LNKO01000055.1	Genbank	gene	24353	24970	.	+	.	ID=gene-AO052_04455;Name=AO052_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04455
LNKO01000055.1	Protein Homology	CDS	24353	24970	.	+	0	ID=cds-TMQ39491.1;Parent=gene-AO052_04455;Dbxref=NCBI_GP:TMQ39491.1;Name=TMQ39491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632426.1;locus_tag=AO052_04455;product=cobalt ABC transporter ATP-binding protein;protein_id=TMQ39491.1;transl_table=11
LNKO01000055.1	Genbank	pseudogene	25129	25481	.	-	.	ID=gene-AO052_04460;Name=AO052_04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04460;pseudo=true
LNKO01000055.1	Protein Homology	CDS	25129	25481	.	-	2	ID=cds-AO052_04460;Parent=gene-AO052_04460;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653185.1;locus_tag=AO052_04460;pseudo=true;transl_table=11
##sequence-region LNKO01000056.1 1 1309
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000056.1	Genbank	region	1	1309	.	+	.	ID=LNKO01000056.1:1..1309;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000056.1	Genbank	gene	1	437	.	-	.	ID=gene-AO052_04465;Name=AO052_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04465;partial=true;start_range=.,1
LNKO01000056.1	Protein Homology	CDS	1	437	.	-	0	ID=cds-TMQ39417.1;Parent=gene-AO052_04465;Dbxref=NCBI_GP:TMQ39417.1;Name=TMQ39417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525915.1;locus_tag=AO052_04465;partial=true;product=enoyl-CoA hydratase;protein_id=TMQ39417.1;start_range=.,1;transl_table=11
LNKO01000056.1	Genbank	gene	434	1036	.	-	.	ID=gene-AO052_04470;Name=AO052_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04470
LNKO01000056.1	Protein Homology	CDS	434	1036	.	-	0	ID=cds-TMQ39418.1;Parent=gene-AO052_04470;Dbxref=NCBI_GP:TMQ39418.1;Name=TMQ39418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527351.1;locus_tag=AO052_04470;product=hypothetical protein;protein_id=TMQ39418.1;transl_table=11
LNKO01000056.1	Genbank	gene	1048	1309	.	-	.	ID=gene-AO052_04475;Name=AO052_04475;end_range=1309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04475;partial=true
LNKO01000056.1	GeneMarkS+	CDS	1048	1309	.	-	1	ID=cds-TMQ39419.1;Parent=gene-AO052_04475;Dbxref=NCBI_GP:TMQ39419.1;Name=TMQ39419.1;end_range=1309,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_04475;partial=true;product=hypothetical protein;protein_id=TMQ39419.1;transl_table=11
##sequence-region LNKO01000057.1 1 8388
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000057.1	Genbank	region	1	8388	.	+	.	ID=LNKO01000057.1:1..8388;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000057.1	Genbank	pseudogene	1	207	.	-	.	ID=gene-AO052_04480;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO052_04480;pseudo=true
LNKO01000057.1	Protein Homology	CDS	1	207	.	-	0	ID=cds-AO052_04480;Parent=gene-AO052_04480;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001426213.1;locus_tag=AO052_04480;pseudo=true;transl_table=11
LNKO01000057.1	Genbank	gene	272	2374	.	-	.	ID=gene-AO052_04485;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AO052_04485
LNKO01000057.1	Protein Homology	CDS	272	2374	.	-	0	ID=cds-TMQ39409.1;Parent=gene-AO052_04485;Dbxref=NCBI_GP:TMQ39409.1;Name=TMQ39409.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243488.1;locus_tag=AO052_04485;product=elongation factor G;protein_id=TMQ39409.1;transl_table=11
LNKO01000057.1	Genbank	gene	2458	2928	.	-	.	ID=gene-AO052_04490;Name=AO052_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04490
LNKO01000057.1	Protein Homology	CDS	2458	2928	.	-	0	ID=cds-TMQ39410.1;Parent=gene-AO052_04490;Dbxref=NCBI_GP:TMQ39410.1;Name=TMQ39410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526570.1;locus_tag=AO052_04490;product=30S ribosomal protein S7;protein_id=TMQ39410.1;transl_table=11
LNKO01000057.1	Genbank	gene	3085	3459	.	-	.	ID=gene-AO052_04495;Name=AO052_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04495
LNKO01000057.1	Protein Homology	CDS	3085	3459	.	-	0	ID=cds-TMQ39411.1;Parent=gene-AO052_04495;Dbxref=NCBI_GP:TMQ39411.1;Name=TMQ39411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0KQ98.1;locus_tag=AO052_04495;product=30S ribosomal protein S12;protein_id=TMQ39411.1;transl_table=11
LNKO01000057.1	Genbank	gene	3640	5529	.	-	.	ID=gene-AO052_04500;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=AO052_04500
LNKO01000057.1	Protein Homology	CDS	3640	5529	.	-	0	ID=cds-TMQ39412.1;Parent=gene-AO052_04500;Dbxref=NCBI_GP:TMQ39412.1;Name=TMQ39412.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHB8.1;locus_tag=AO052_04500;product=tRNA uridine 5-carboxymethylaminomethyl modification protein;protein_id=TMQ39412.1;transl_table=11
LNKO01000057.1	Genbank	gene	6216	8186	.	-	.	ID=gene-AO052_04505;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AO052_04505
LNKO01000057.1	Protein Homology	CDS	6216	8186	.	-	0	ID=cds-TMQ39413.1;Parent=gene-AO052_04505;Dbxref=NCBI_GP:TMQ39413.1;Name=TMQ39413.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995232.1;locus_tag=AO052_04505;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=TMQ39413.1;transl_table=11
##sequence-region LNKO01000058.1 1 14717
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000058.1	Genbank	region	1	14717	.	+	.	ID=LNKO01000058.1:1..14717;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000058.1	Genbank	gene	299	1660	.	+	.	ID=gene-AO052_04510;Name=AO052_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04510
LNKO01000058.1	Protein Homology	CDS	299	1660	.	+	0	ID=cds-TMQ39391.1;Parent=gene-AO052_04510;Dbxref=NCBI_GP:TMQ39391.1;Name=TMQ39391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995233.1;locus_tag=AO052_04510;product=histidine-histamine antiporter;protein_id=TMQ39391.1;transl_table=11
LNKO01000058.1	Genbank	gene	1684	2835	.	+	.	ID=gene-AO052_04515;Name=AO052_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04515
LNKO01000058.1	Protein Homology	CDS	1684	2835	.	+	0	ID=cds-TMQ39392.1;Parent=gene-AO052_04515;Dbxref=NCBI_GP:TMQ39392.1;Name=TMQ39392.1;Note=catalyzes the formation of histamine from L-histidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995234.1;locus_tag=AO052_04515;product=histidine decarboxylase;protein_id=TMQ39392.1;transl_table=11
LNKO01000058.1	Genbank	gene	3046	3450	.	+	.	ID=gene-AO052_04520;Name=AO052_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04520
LNKO01000058.1	Protein Homology	CDS	3046	3450	.	+	0	ID=cds-TMQ39393.1;Parent=gene-AO052_04520;Dbxref=NCBI_GP:TMQ39393.1;Name=TMQ39393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692799.1;locus_tag=AO052_04520;product=hypothetical protein;protein_id=TMQ39393.1;transl_table=11
LNKO01000058.1	Genbank	gene	3868	5124	.	+	.	ID=gene-AO052_04525;Name=AO052_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04525
LNKO01000058.1	Protein Homology	CDS	3868	5124	.	+	0	ID=cds-TMQ39394.1;Parent=gene-AO052_04525;Dbxref=NCBI_GP:TMQ39394.1;Name=TMQ39394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995238.1;locus_tag=AO052_04525;product=histidyl-tRNA synthetase;protein_id=TMQ39394.1;transl_table=11
LNKO01000058.1	Genbank	gene	5247	6542	.	-	.	ID=gene-AO052_04530;Name=AO052_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04530
LNKO01000058.1	Protein Homology	CDS	5247	6542	.	-	0	ID=cds-TMQ39395.1;Parent=gene-AO052_04530;Dbxref=NCBI_GP:TMQ39395.1;Name=TMQ39395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627117.1;locus_tag=AO052_04530;product=C4-dicarboxylate ABC transporter;protein_id=TMQ39395.1;transl_table=11
LNKO01000058.1	Genbank	gene	6560	7264	.	-	.	ID=gene-AO052_04535;Name=AO052_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04535
LNKO01000058.1	Protein Homology	CDS	6560	7264	.	-	0	ID=cds-TMQ39396.1;Parent=gene-AO052_04535;Dbxref=NCBI_GP:TMQ39396.1;Name=TMQ39396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMU5.1;locus_tag=AO052_04535;product=peptidase E;protein_id=TMQ39396.1;transl_table=11
LNKO01000058.1	Protein Homology	pseudogene	7724	10677	.	-	.	ID=gene-AO052_04540;Name=AO052_04540;Note=disrupted;description=ligand-gated channel protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04540;pseudo=true
LNKO01000058.1	Genbank	gene	10980	12725	.	+	.	ID=gene-AO052_04545;Name=AO052_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04545
LNKO01000058.1	Protein Homology	CDS	10980	12725	.	+	0	ID=cds-TMQ39397.1;Parent=gene-AO052_04545;Dbxref=NCBI_GP:TMQ39397.1;Name=TMQ39397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055159.1;locus_tag=AO052_04545;product=ABC transporter ATP-binding protein;protein_id=TMQ39397.1;transl_table=11
LNKO01000058.1	Genbank	gene	12718	14376	.	+	.	ID=gene-AO052_04550;Name=AO052_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04550
LNKO01000058.1	Protein Homology	CDS	12718	14376	.	+	0	ID=cds-TMQ39398.1;Parent=gene-AO052_04550;Dbxref=NCBI_GP:TMQ39398.1;Name=TMQ39398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551120.1;locus_tag=AO052_04550;product=ABC transporter ATP-binding protein;protein_id=TMQ39398.1;transl_table=11
LNKO01000058.1	Genbank	pseudogene	14459	14717	.	-	.	ID=gene-AO052_04555;Name=AO052_04555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04555;pseudo=true
LNKO01000058.1	Protein Homology	CDS	14459	14717	.	-	1	ID=cds-AO052_04555;Parent=gene-AO052_04555;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672744.1;locus_tag=AO052_04555;pseudo=true;transl_table=11
##sequence-region LNKO01000059.1 1 60574
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000059.1	Genbank	region	1	60574	.	+	.	ID=LNKO01000059.1:1..60574;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000059.1	Genbank	gene	1	770	.	-	.	ID=gene-AO052_04560;Name=AO052_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04560;partial=true;start_range=.,1
LNKO01000059.1	Protein Homology	CDS	1	770	.	-	0	ID=cds-TMQ39330.1;Parent=gene-AO052_04560;Dbxref=NCBI_GP:TMQ39330.1;Name=TMQ39330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635269.1;locus_tag=AO052_04560;partial=true;product=kinase;protein_id=TMQ39330.1;start_range=.,1;transl_table=11
LNKO01000059.1	Genbank	gene	767	1087	.	-	.	ID=gene-AO052_04565;Name=AO052_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04565
LNKO01000059.1	Protein Homology	CDS	767	1087	.	-	0	ID=cds-TMQ39331.1;Parent=gene-AO052_04565;Dbxref=NCBI_GP:TMQ39331.1;Name=TMQ39331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526378.1;locus_tag=AO052_04565;product=hypothetical protein;protein_id=TMQ39331.1;transl_table=11
LNKO01000059.1	Genbank	gene	1075	1383	.	-	.	ID=gene-AO052_04570;Name=AO052_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04570
LNKO01000059.1	Protein Homology	CDS	1075	1383	.	-	0	ID=cds-TMQ39332.1;Parent=gene-AO052_04570;Dbxref=NCBI_GP:TMQ39332.1;Name=TMQ39332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O86228.1;locus_tag=AO052_04570;product=transcriptional regulator;protein_id=TMQ39332.1;transl_table=11
LNKO01000059.1	Genbank	gene	1584	2585	.	-	.	ID=gene-AO052_04575;Name=AO052_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04575
LNKO01000059.1	Protein Homology	CDS	1584	2585	.	-	0	ID=cds-TMQ39333.1;Parent=gene-AO052_04575;Dbxref=NCBI_GP:TMQ39333.1;Name=TMQ39333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667633.1;locus_tag=AO052_04575;product=fructose 1%2C6-bisphosphatase;protein_id=TMQ39333.1;transl_table=11
LNKO01000059.1	Genbank	gene	2747	2965	.	+	.	ID=gene-AO052_04580;Name=AO052_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04580
LNKO01000059.1	Protein Homology	CDS	2747	2965	.	+	0	ID=cds-TMQ39334.1;Parent=gene-AO052_04580;Dbxref=NCBI_GP:TMQ39334.1;Name=TMQ39334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44812.1;locus_tag=AO052_04580;product=cell division protein ZapB;protein_id=TMQ39334.1;transl_table=11
LNKO01000059.1	Genbank	gene	3062	3502	.	+	.	ID=gene-AO052_04585;Name=AO052_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04585
LNKO01000059.1	Protein Homology	CDS	3062	3502	.	+	0	ID=cds-TMQ39335.1;Parent=gene-AO052_04585;Dbxref=NCBI_GP:TMQ39335.1;Name=TMQ39335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672751.1;locus_tag=AO052_04585;product=mioC;protein_id=TMQ39335.1;transl_table=11
LNKO01000059.1	Genbank	gene	3499	3933	.	+	.	ID=gene-AO052_04590;Name=AO052_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04590
LNKO01000059.1	Protein Homology	CDS	3499	3933	.	+	0	ID=cds-TMQ39336.1;Parent=gene-AO052_04590;Dbxref=NCBI_GP:TMQ39336.1;Name=TMQ39336.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551116.1;locus_tag=AO052_04590;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TMQ39336.1;transl_table=11
LNKO01000059.1	Genbank	gene	4429	4905	.	-	.	ID=gene-AO052_04595;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AO052_04595
LNKO01000059.1	Protein Homology	CDS	4429	4905	.	-	0	ID=cds-TMQ39337.1;Parent=gene-AO052_04595;Dbxref=NCBI_GP:TMQ39337.1;Name=TMQ39337.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44815.1;locus_tag=AO052_04595;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=TMQ39337.1;transl_table=11
LNKO01000059.1	Genbank	gene	4902	5579	.	-	.	ID=gene-AO052_04600;Name=AO052_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04600
LNKO01000059.1	Protein Homology	CDS	4902	5579	.	-	0	ID=cds-TMQ39338.1;Parent=gene-AO052_04600;Dbxref=NCBI_GP:TMQ39338.1;Name=TMQ39338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665663.1;locus_tag=AO052_04600;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TMQ39338.1;transl_table=11
LNKO01000059.1	Genbank	gene	5579	5857	.	-	.	ID=gene-AO052_04605;Name=AO052_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04605
LNKO01000059.1	Protein Homology	CDS	5579	5857	.	-	0	ID=cds-TMQ39339.1;Parent=gene-AO052_04605;Dbxref=NCBI_GP:TMQ39339.1;Name=TMQ39339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE58.1;locus_tag=AO052_04605;product=cell division protein FtsB;protein_id=TMQ39339.1;transl_table=11
LNKO01000059.1	Genbank	gene	5980	6447	.	-	.	ID=gene-AO052_04610;Name=AO052_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04610
LNKO01000059.1	Protein Homology	CDS	5980	6447	.	-	0	ID=cds-TMQ39340.1;Parent=gene-AO052_04610;Dbxref=NCBI_GP:TMQ39340.1;Name=TMQ39340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43859.1;locus_tag=AO052_04610;product=xanthine phosphoribosyltransferase;protein_id=TMQ39340.1;transl_table=11
LNKO01000059.1	Genbank	gene	6558	8012	.	+	.	ID=gene-AO052_04615;Name=AO052_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04615
LNKO01000059.1	Protein Homology	CDS	6558	8012	.	+	0	ID=cds-TMQ39341.1;Parent=gene-AO052_04615;Dbxref=NCBI_GP:TMQ39341.1;Name=TMQ39341.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527389.1;locus_tag=AO052_04615;product=aminoacyl-histidine dipeptidase;protein_id=TMQ39341.1;transl_table=11
LNKO01000059.1	Genbank	gene	8053	8952	.	-	.	ID=gene-AO052_04620;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AO052_04620
LNKO01000059.1	Protein Homology	CDS	8053	8952	.	-	0	ID=cds-TMQ39342.1;Parent=gene-AO052_04620;Dbxref=NCBI_GP:TMQ39342.1;Name=TMQ39342.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995253.1;locus_tag=AO052_04620;product=recombinase XerC;protein_id=TMQ39342.1;transl_table=11
LNKO01000059.1	Genbank	gene	8946	9386	.	-	.	ID=gene-AO052_04625;Name=AO052_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04625
LNKO01000059.1	Protein Homology	CDS	8946	9386	.	-	0	ID=cds-TMQ39343.1;Parent=gene-AO052_04625;Dbxref=NCBI_GP:TMQ39343.1;Name=TMQ39343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44036.1;locus_tag=AO052_04625;product=hypothetical protein;protein_id=TMQ39343.1;transl_table=11
LNKO01000059.1	Genbank	gene	9552	10343	.	+	.	ID=gene-AO052_04630;Name=AO052_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04630
LNKO01000059.1	Protein Homology	CDS	9552	10343	.	+	0	ID=cds-TMQ39344.1;Parent=gene-AO052_04630;Dbxref=NCBI_GP:TMQ39344.1;Name=TMQ39344.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694828.1;locus_tag=AO052_04630;product=triose-phosphate isomerase;protein_id=TMQ39344.1;transl_table=11
LNKO01000059.1	Genbank	gene	10425	10742	.	-	.	ID=gene-AO052_04635;Name=AO052_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04635
LNKO01000059.1	Protein Homology	CDS	10425	10742	.	-	0	ID=cds-TMQ39345.1;Parent=gene-AO052_04635;Dbxref=NCBI_GP:TMQ39345.1;Name=TMQ39345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526376.1;locus_tag=AO052_04635;product=thiosulfate sulfurtransferase;protein_id=TMQ39345.1;transl_table=11
LNKO01000059.1	Genbank	gene	10743	11621	.	-	.	ID=gene-AO052_04640;Name=AO052_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04640
LNKO01000059.1	Protein Homology	CDS	10743	11621	.	-	0	ID=cds-TMQ39346.1;Parent=gene-AO052_04640;Dbxref=NCBI_GP:TMQ39346.1;Name=TMQ39346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57389.1;locus_tag=AO052_04640;product=permease;protein_id=TMQ39346.1;transl_table=11
LNKO01000059.1	Genbank	gene	11653	12531	.	-	.	ID=gene-AO052_04645;Name=AO052_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04645
LNKO01000059.1	Protein Homology	CDS	11653	12531	.	-	0	ID=cds-TMQ39347.1;Parent=gene-AO052_04645;Dbxref=NCBI_GP:TMQ39347.1;Name=TMQ39347.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272165.1;locus_tag=AO052_04645;product=transcriptional regulator;protein_id=TMQ39347.1;transl_table=11
LNKO01000059.1	Genbank	gene	13209	14687	.	+	.	ID=gene-AO052_04650;Name=AO052_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04650
LNKO01000059.1	Protein Homology	CDS	13209	14687	.	+	0	ID=cds-TMQ39348.1;Parent=gene-AO052_04650;Dbxref=NCBI_GP:TMQ39348.1;Name=TMQ39348.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661223.1;locus_tag=AO052_04650;product=ketol-acid reductoisomerase;protein_id=TMQ39348.1;transl_table=11
LNKO01000059.1	Genbank	gene	14798	16078	.	-	.	ID=gene-AO052_04655;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AO052_04655
LNKO01000059.1	Protein Homology	CDS	14798	16078	.	-	0	ID=cds-TMQ39349.1;Parent=gene-AO052_04655;Dbxref=NCBI_GP:TMQ39349.1;Name=TMQ39349.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658423.1;locus_tag=AO052_04655;product=glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit;protein_id=TMQ39349.1;transl_table=11
LNKO01000059.1	Genbank	gene	16090	17388	.	-	.	ID=gene-AO052_04660;Name=AO052_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04660
LNKO01000059.1	Protein Homology	CDS	16090	17388	.	-	0	ID=cds-TMQ39350.1;Parent=gene-AO052_04660;Dbxref=NCBI_GP:TMQ39350.1;Name=TMQ39350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE48.1;locus_tag=AO052_04660;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TMQ39350.1;transl_table=11
LNKO01000059.1	Genbank	gene	17378	19069	.	-	.	ID=gene-AO052_04665;Name=AO052_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04665
LNKO01000059.1	Protein Homology	CDS	17378	19069	.	-	0	ID=cds-TMQ39351.1;Parent=gene-AO052_04665;Dbxref=NCBI_GP:TMQ39351.1;Name=TMQ39351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655019.1;locus_tag=AO052_04665;product=glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit;protein_id=TMQ39351.1;transl_table=11
LNKO01000059.1	Genbank	gene	19363	20805	.	+	.	ID=gene-AO052_04670;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AO052_04670
LNKO01000059.1	Protein Homology	CDS	19363	20805	.	+	0	ID=cds-TMQ39352.1;Parent=gene-AO052_04670;Dbxref=NCBI_GP:TMQ39352.1;Name=TMQ39352.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064617.1;locus_tag=AO052_04670;product=glycerol-3-phosphate transporter;protein_id=TMQ39352.1;transl_table=11
LNKO01000059.1	Genbank	gene	20909	22003	.	+	.	ID=gene-AO052_04675;Name=AO052_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04675
LNKO01000059.1	Protein Homology	CDS	20909	22003	.	+	0	ID=cds-TMQ39353.1;Parent=gene-AO052_04675;Dbxref=NCBI_GP:TMQ39353.1;Name=TMQ39353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655022.1;locus_tag=AO052_04675;product=glycerophosphoryl diester phosphodiesterase;protein_id=TMQ39353.1;transl_table=11
LNKO01000059.1	Genbank	gene	22128	22952	.	+	.	ID=gene-AO052_04680;Name=AO052_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04680
LNKO01000059.1	Protein Homology	CDS	22128	22952	.	+	0	ID=cds-TMQ39354.1;Parent=gene-AO052_04680;Dbxref=NCBI_GP:TMQ39354.1;Name=TMQ39354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701804.1;locus_tag=AO052_04680;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=TMQ39354.1;transl_table=11
LNKO01000059.1	Genbank	gene	23130	23813	.	+	.	ID=gene-AO052_04685;Name=AO052_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04685
LNKO01000059.1	Protein Homology	CDS	23130	23813	.	+	0	ID=cds-TMQ39355.1;Parent=gene-AO052_04685;Dbxref=NCBI_GP:TMQ39355.1;Name=TMQ39355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638453.1;locus_tag=AO052_04685;product=pseudouridine synthase;protein_id=TMQ39355.1;transl_table=11
LNKO01000059.1	Protein Homology	pseudogene	23939	24909	.	-	.	ID=gene-AO052_04690;Name=AO052_04690;Note=disrupted;description=exopolyphosphatase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04690;pseudo=true
LNKO01000059.1	Genbank	gene	24917	28813	.	-	.	ID=gene-AO052_04695;Name=AO052_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04695
LNKO01000059.1	Protein Homology	CDS	24917	28813	.	-	0	ID=cds-TMQ39356.1;Parent=gene-AO052_04695;Dbxref=NCBI_GP:TMQ39356.1;Name=TMQ39356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692371.1;locus_tag=AO052_04695;product=tubulin-binding protein;protein_id=TMQ39356.1;transl_table=11
LNKO01000059.1	Genbank	gene	28823	30559	.	-	.	ID=gene-AO052_04700;Name=AO052_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04700
LNKO01000059.1	Protein Homology	CDS	28823	30559	.	-	0	ID=cds-TMQ39357.1;Parent=gene-AO052_04700;Dbxref=NCBI_GP:TMQ39357.1;Name=TMQ39357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654307.1;locus_tag=AO052_04700;product=hypothetical protein;protein_id=TMQ39357.1;transl_table=11
LNKO01000059.1	Genbank	gene	30711	31271	.	-	.	ID=gene-AO052_04705;Name=AO052_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04705
LNKO01000059.1	Protein Homology	CDS	30711	31271	.	-	0	ID=cds-TMQ39358.1;Parent=gene-AO052_04705;Dbxref=NCBI_GP:TMQ39358.1;Name=TMQ39358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701809.1;locus_tag=AO052_04705;product=peptidylprolyl isomerase;protein_id=TMQ39358.1;transl_table=11
LNKO01000059.1	Genbank	gene	31501	33381	.	+	.	ID=gene-AO052_04710;Name=AO052_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04710
LNKO01000059.1	Protein Homology	CDS	31501	33381	.	+	0	ID=cds-TMQ39359.1;Parent=gene-AO052_04710;Dbxref=NCBI_GP:TMQ39359.1;Name=TMQ39359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526365.1;locus_tag=AO052_04710;product=type III restriction endonuclease subunit M;protein_id=TMQ39359.1;transl_table=11
LNKO01000059.1	Genbank	gene	33383	36283	.	+	.	ID=gene-AO052_04715;Name=AO052_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04715
LNKO01000059.1	Protein Homology	CDS	33383	36283	.	+	0	ID=cds-TMQ39360.1;Parent=gene-AO052_04715;Dbxref=NCBI_GP:TMQ39360.1;Name=TMQ39360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654311.1;locus_tag=AO052_04715;product=restriction endonuclease subunit R;protein_id=TMQ39360.1;transl_table=11
LNKO01000059.1	Genbank	gene	36346	36768	.	-	.	ID=gene-AO052_04720;Name=AO052_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04720
LNKO01000059.1	Protein Homology	CDS	36346	36768	.	-	0	ID=cds-TMQ39361.1;Parent=gene-AO052_04720;Dbxref=NCBI_GP:TMQ39361.1;Name=TMQ39361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526363.1;locus_tag=AO052_04720;product=RNase E inhibitor protein;protein_id=TMQ39361.1;transl_table=11
LNKO01000059.1	Genbank	gene	36877	37896	.	+	.	ID=gene-AO052_04725;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=AO052_04725
LNKO01000059.1	Protein Homology	CDS	36877	37896	.	+	0	ID=cds-TMQ39362.1;Parent=gene-AO052_04725;Dbxref=NCBI_GP:TMQ39362.1;Name=TMQ39362.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551102.1;locus_tag=AO052_04725;product=tRNA pseudouridine synthase D;protein_id=TMQ39362.1;transl_table=11
LNKO01000059.1	Genbank	gene	37906	38655	.	+	.	ID=gene-AO052_04730;Name=AO052_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04730
LNKO01000059.1	Protein Homology	CDS	37906	38655	.	+	0	ID=cds-TMQ39363.1;Parent=gene-AO052_04730;Dbxref=NCBI_GP:TMQ39363.1;Name=TMQ39363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45681.1;locus_tag=AO052_04730;product=stationary phase survival protein SurE;protein_id=TMQ39363.1;transl_table=11
LNKO01000059.1	Genbank	gene	38664	39242	.	+	.	ID=gene-AO052_04735;Name=AO052_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04735
LNKO01000059.1	Protein Homology	CDS	38664	39242	.	+	0	ID=cds-TMQ39364.1;Parent=gene-AO052_04735;Dbxref=NCBI_GP:TMQ39364.1;Name=TMQ39364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526360.1;locus_tag=AO052_04735;product=hypothetical protein;protein_id=TMQ39364.1;transl_table=11
LNKO01000059.1	Genbank	gene	39251	39436	.	+	.	ID=gene-AO052_04740;Name=AO052_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04740
LNKO01000059.1	Protein Homology	CDS	39251	39436	.	+	0	ID=cds-TMQ39365.1;Parent=gene-AO052_04740;Dbxref=NCBI_GP:TMQ39365.1;Name=TMQ39365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44040.1;locus_tag=AO052_04740;product=hypothetical protein;protein_id=TMQ39365.1;transl_table=11
LNKO01000059.1	Genbank	gene	39460	40662	.	+	.	ID=gene-AO052_04745;Name=AO052_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04745
LNKO01000059.1	Protein Homology	CDS	39460	40662	.	+	0	ID=cds-TMQ39366.1;Parent=gene-AO052_04745;Dbxref=NCBI_GP:TMQ39366.1;Name=TMQ39366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526359.1;locus_tag=AO052_04745;product=hypothetical protein;protein_id=TMQ39366.1;transl_table=11
LNKO01000059.1	Genbank	gene	40797	43382	.	+	.	ID=gene-AO052_04750;Name=AO052_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04750
LNKO01000059.1	Protein Homology	CDS	40797	43382	.	+	0	ID=cds-TMQ39367.1;Parent=gene-AO052_04750;Dbxref=NCBI_GP:TMQ39367.1;Name=TMQ39367.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE20.1;locus_tag=AO052_04750;product=DNA mismatch repair protein MutS;protein_id=TMQ39367.1;transl_table=11
LNKO01000059.1	Genbank	gene	43775	44863	.	-	.	ID=gene-AO052_04755;Name=AO052_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04755
LNKO01000059.1	Protein Homology	CDS	43775	44863	.	-	0	ID=cds-TMQ39368.1;Parent=gene-AO052_04755;Dbxref=NCBI_GP:TMQ39368.1;Name=TMQ39368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527383.1;locus_tag=AO052_04755;product=selenocysteine synthase;protein_id=TMQ39368.1;transl_table=11
LNKO01000059.1	Protein Homology	pseudogene	45096	48312	.	-	.	ID=gene-AO052_04760;Name=AO052_04760;Note=disrupted;description=TonB-dependent receptor;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04760;pseudo=true
LNKO01000059.1	Genbank	gene	48614	49912	.	+	.	ID=gene-AO052_04765;Name=AO052_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04765
LNKO01000059.1	Protein Homology	CDS	48614	49912	.	+	0	ID=cds-TMQ39369.1;Parent=gene-AO052_04765;Dbxref=NCBI_GP:TMQ39369.1;Name=TMQ39369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694636.1;locus_tag=AO052_04765;product=trigger factor;protein_id=TMQ39369.1;transl_table=11
LNKO01000059.1	Genbank	gene	50035	50616	.	+	.	ID=gene-AO052_04770;Name=AO052_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04770
LNKO01000059.1	Protein Homology	CDS	50035	50616	.	+	0	ID=cds-TMQ39370.1;Parent=gene-AO052_04770;Dbxref=NCBI_GP:TMQ39370.1;Name=TMQ39370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE11.1;locus_tag=AO052_04770;product=ATP-dependent Clp protease proteolytic subunit;protein_id=TMQ39370.1;transl_table=11
LNKO01000059.1	Genbank	gene	50626	51861	.	+	.	ID=gene-AO052_04775;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AO052_04775
LNKO01000059.1	Protein Homology	CDS	50626	51861	.	+	0	ID=cds-TMQ39371.1;Parent=gene-AO052_04775;Dbxref=NCBI_GP:TMQ39371.1;Name=TMQ39371.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:SwissProt:P44838.1;locus_tag=AO052_04775;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TMQ39371.1;transl_table=11
LNKO01000059.1	Genbank	gene	52005	52421	.	+	.	ID=gene-AO052_04780;Name=AO052_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04780
LNKO01000059.1	Protein Homology	CDS	52005	52421	.	+	0	ID=cds-TMQ39372.1;Parent=gene-AO052_04780;Dbxref=NCBI_GP:TMQ39372.1;Name=TMQ39372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551093.1;locus_tag=AO052_04780;product=preprotein translocase subunit SecE;protein_id=TMQ39372.1;transl_table=11
LNKO01000059.1	Genbank	gene	52423	52980	.	+	.	ID=gene-AO052_04785;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AO052_04785
LNKO01000059.1	Protein Homology	CDS	52423	52980	.	+	0	ID=cds-TMQ39373.1;Parent=gene-AO052_04785;Dbxref=NCBI_GP:TMQ39373.1;Name=TMQ39373.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500266.1;locus_tag=AO052_04785;product=transcription antiterminator NusG;protein_id=TMQ39373.1;transl_table=11
LNKO01000059.1	Genbank	gene	53131	53883	.	+	.	ID=gene-AO052_04790;Name=AO052_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04790
LNKO01000059.1	Protein Homology	CDS	53131	53883	.	+	0	ID=cds-TMQ39374.1;Parent=gene-AO052_04790;Dbxref=NCBI_GP:TMQ39374.1;Name=TMQ39374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693034.1;locus_tag=AO052_04790;product=hypothetical protein;protein_id=TMQ39374.1;transl_table=11
LNKO01000059.1	Genbank	gene	53940	54329	.	+	.	ID=gene-AO052_04795;Name=AO052_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04795
LNKO01000059.1	Protein Homology	CDS	53940	54329	.	+	0	ID=cds-TMQ39375.1;Parent=gene-AO052_04795;Dbxref=NCBI_GP:TMQ39375.1;Name=TMQ39375.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665559.1;locus_tag=AO052_04795;product=reactive intermediate/imine deaminase;protein_id=TMQ39375.1;transl_table=11
LNKO01000059.1	Genbank	gene	54398	55561	.	-	.	ID=gene-AO052_04800;Name=AO052_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04800
LNKO01000059.1	Protein Homology	CDS	54398	55561	.	-	0	ID=cds-TMQ39380.1;Parent=gene-AO052_04800;Dbxref=NCBI_GP:TMQ39380.1;Name=TMQ39380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500453.1;locus_tag=AO052_04800;product=HNH endonuclease;protein_id=TMQ39380.1;transl_table=11
LNKO01000059.1	Protein Homology	pseudogene	55609	56756	.	-	.	ID=gene-AO052_04805;Name=AO052_04805;Note=disrupted;description=DNA methyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04805;pseudo=true
LNKO01000059.1	Genbank	gene	57109	57960	.	+	.	ID=gene-AO052_04810;Name=AO052_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04810
LNKO01000059.1	Protein Homology	CDS	57109	57960	.	+	0	ID=cds-TMQ39376.1;Parent=gene-AO052_04810;Dbxref=NCBI_GP:TMQ39376.1;Name=TMQ39376.1;Note=metalloprotease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527380.1;locus_tag=AO052_04810;product=heat-shock protein HtpX;protein_id=TMQ39376.1;transl_table=11
LNKO01000059.1	Genbank	gene	58002	58241	.	-	.	ID=gene-AO052_04815;Name=AO052_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04815
LNKO01000059.1	Protein Homology	CDS	58002	58241	.	-	0	ID=cds-TMQ39377.1;Parent=gene-AO052_04815;Dbxref=NCBI_GP:TMQ39377.1;Name=TMQ39377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648599.1;locus_tag=AO052_04815;product=sulfurtransferase;protein_id=TMQ39377.1;transl_table=11
LNKO01000059.1	Genbank	gene	58357	58977	.	+	.	ID=gene-AO052_04820;Name=AO052_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04820
LNKO01000059.1	Protein Homology	CDS	58357	58977	.	+	0	ID=cds-TMQ39378.1;Parent=gene-AO052_04820;Dbxref=NCBI_GP:TMQ39378.1;Name=TMQ39378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687845.1;locus_tag=AO052_04820;product=IMPACT family protein;protein_id=TMQ39378.1;transl_table=11
LNKO01000059.1	Genbank	gene	58980	60443	.	+	.	ID=gene-AO052_04825;Name=AO052_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04825
LNKO01000059.1	Protein Homology	CDS	58980	60443	.	+	0	ID=cds-TMQ39379.1;Parent=gene-AO052_04825;Dbxref=NCBI_GP:TMQ39379.1;Name=TMQ39379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667715.1;locus_tag=AO052_04825;product=potassium transporter;protein_id=TMQ39379.1;transl_table=11
##sequence-region LNKO01000060.1 1 1394
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000060.1	Genbank	region	1	1394	.	+	.	ID=LNKO01000060.1:1..1394;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000060.1	Genbank	pseudogene	1	1394	.	+	.	ID=gene-AO052_04830;Name=AO052_04830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04830;pseudo=true
LNKO01000060.1	Protein Homology	CDS	1	1394	.	+	0	ID=cds-AO052_04830;Parent=gene-AO052_04830;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO052_04830;pseudo=true;transl_table=11
##sequence-region LNKO01000061.1 1 1056
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000061.1	Genbank	region	1	1056	.	+	.	ID=LNKO01000061.1:1..1056;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000061.1	Genbank	pseudogene	1	1056	.	-	.	ID=gene-AO052_04835;Name=AO052_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04835;pseudo=true
LNKO01000061.1	Protein Homology	CDS	1	1056	.	-	0	ID=cds-AO052_04835;Parent=gene-AO052_04835;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO052_04835;pseudo=true;transl_table=11
##sequence-region LNKO01000062.1 1 28128
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000062.1	Genbank	region	1	28128	.	+	.	ID=LNKO01000062.1:1..28128;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000062.1	Genbank	pseudogene	1	1419	.	-	.	ID=gene-AO052_04840;Name=AO052_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_04840;pseudo=true
LNKO01000062.1	Protein Homology	CDS	1	1419	.	-	0	ID=cds-AO052_04840;Parent=gene-AO052_04840;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527471.1;locus_tag=AO052_04840;pseudo=true;transl_table=11
LNKO01000062.1	Genbank	gene	1429	2043	.	-	.	ID=gene-AO052_04845;Name=AO052_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04845
LNKO01000062.1	Protein Homology	CDS	1429	2043	.	-	0	ID=cds-TMQ39202.1;Parent=gene-AO052_04845;Dbxref=NCBI_GP:TMQ39202.1;Name=TMQ39202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692550.1;locus_tag=AO052_04845;product=hypothetical protein;protein_id=TMQ39202.1;transl_table=11
LNKO01000062.1	Genbank	gene	2052	3488	.	-	.	ID=gene-AO052_04850;Name=AO052_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04850
LNKO01000062.1	Protein Homology	CDS	2052	3488	.	-	0	ID=cds-TMQ39203.1;Parent=gene-AO052_04850;Dbxref=NCBI_GP:TMQ39203.1;Name=TMQ39203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272524.1;locus_tag=AO052_04850;product=hypothetical protein;protein_id=TMQ39203.1;transl_table=11
LNKO01000062.1	Genbank	gene	3481	3846	.	-	.	ID=gene-AO052_04855;Name=AO052_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04855
LNKO01000062.1	Protein Homology	CDS	3481	3846	.	-	0	ID=cds-TMQ39204.1;Parent=gene-AO052_04855;Dbxref=NCBI_GP:TMQ39204.1;Name=TMQ39204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651178.1;locus_tag=AO052_04855;product=hypothetical protein;protein_id=TMQ39204.1;transl_table=11
LNKO01000062.1	Genbank	gene	3843	4514	.	-	.	ID=gene-AO052_04860;Name=AO052_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04860
LNKO01000062.1	Protein Homology	CDS	3843	4514	.	-	0	ID=cds-TMQ39205.1;Parent=gene-AO052_04860;Dbxref=NCBI_GP:TMQ39205.1;Name=TMQ39205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525583.1;locus_tag=AO052_04860;product=phage baseplate protein;protein_id=TMQ39205.1;transl_table=11
LNKO01000062.1	Genbank	gene	4511	5473	.	-	.	ID=gene-AO052_04865;Name=AO052_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04865
LNKO01000062.1	Protein Homology	CDS	4511	5473	.	-	0	ID=cds-TMQ39206.1;Parent=gene-AO052_04865;Dbxref=NCBI_GP:TMQ39206.1;Name=TMQ39206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525584.1;locus_tag=AO052_04865;product=hypothetical protein;protein_id=TMQ39206.1;transl_table=11
LNKO01000062.1	Genbank	gene	5470	5784	.	-	.	ID=gene-AO052_04870;Name=AO052_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04870
LNKO01000062.1	Protein Homology	CDS	5470	5784	.	-	0	ID=cds-TMQ39207.1;Parent=gene-AO052_04870;Dbxref=NCBI_GP:TMQ39207.1;Name=TMQ39207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688901.1;locus_tag=AO052_04870;product=hypothetical protein;protein_id=TMQ39207.1;transl_table=11
LNKO01000062.1	Genbank	gene	5781	6362	.	-	.	ID=gene-AO052_04875;Name=AO052_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04875
LNKO01000062.1	Protein Homology	CDS	5781	6362	.	-	0	ID=cds-TMQ39208.1;Parent=gene-AO052_04875;Dbxref=NCBI_GP:TMQ39208.1;Name=TMQ39208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688900.1;locus_tag=AO052_04875;product=hypothetical protein;protein_id=TMQ39208.1;transl_table=11
LNKO01000062.1	Genbank	gene	6524	7246	.	+	.	ID=gene-AO052_04880;Name=AO052_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04880
LNKO01000062.1	Protein Homology	CDS	6524	7246	.	+	0	ID=cds-TMQ39209.1;Parent=gene-AO052_04880;Dbxref=NCBI_GP:TMQ39209.1;Name=TMQ39209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527470.1;locus_tag=AO052_04880;product=hypothetical protein;protein_id=TMQ39209.1;transl_table=11
LNKO01000062.1	Genbank	gene	7321	9738	.	-	.	ID=gene-AO052_04885;Name=AO052_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04885
LNKO01000062.1	Protein Homology	CDS	7321	9738	.	-	0	ID=cds-TMQ39210.1;Parent=gene-AO052_04885;Dbxref=NCBI_GP:TMQ39210.1;Name=TMQ39210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272518.1;locus_tag=AO052_04885;product=phage tail protein;protein_id=TMQ39210.1;transl_table=11
LNKO01000062.1	Genbank	gene	9923	10405	.	-	.	ID=gene-AO052_04890;Name=AO052_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04890
LNKO01000062.1	Protein Homology	CDS	9923	10405	.	-	0	ID=cds-TMQ39211.1;Parent=gene-AO052_04890;Dbxref=NCBI_GP:TMQ39211.1;Name=TMQ39211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525589.1;locus_tag=AO052_04890;product=hypothetical protein;protein_id=TMQ39211.1;transl_table=11
LNKO01000062.1	Genbank	gene	10405	10830	.	-	.	ID=gene-AO052_04895;Name=AO052_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04895
LNKO01000062.1	Protein Homology	CDS	10405	10830	.	-	0	ID=cds-TMQ39212.1;Parent=gene-AO052_04895;Dbxref=NCBI_GP:TMQ39212.1;Name=TMQ39212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643344.1;locus_tag=AO052_04895;product=hypothetical protein;protein_id=TMQ39212.1;transl_table=11
LNKO01000062.1	Genbank	gene	10876	11949	.	-	.	ID=gene-AO052_04900;Name=AO052_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04900
LNKO01000062.1	Protein Homology	CDS	10876	11949	.	-	0	ID=cds-TMQ39213.1;Parent=gene-AO052_04900;Dbxref=NCBI_GP:TMQ39213.1;Name=TMQ39213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272516.1;locus_tag=AO052_04900;product=hypothetical protein;protein_id=TMQ39213.1;transl_table=11
LNKO01000062.1	Genbank	gene	11936	12445	.	-	.	ID=gene-AO052_04905;Name=AO052_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04905
LNKO01000062.1	Protein Homology	CDS	11936	12445	.	-	0	ID=cds-TMQ39214.1;Parent=gene-AO052_04905;Dbxref=NCBI_GP:TMQ39214.1;Name=TMQ39214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651165.1;locus_tag=AO052_04905;product=hypothetical protein;protein_id=TMQ39214.1;transl_table=11
LNKO01000062.1	Genbank	gene	12447	12806	.	-	.	ID=gene-AO052_04910;Name=AO052_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04910
LNKO01000062.1	Protein Homology	CDS	12447	12806	.	-	0	ID=cds-TMQ39215.1;Parent=gene-AO052_04910;Dbxref=NCBI_GP:TMQ39215.1;Name=TMQ39215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525592.1;locus_tag=AO052_04910;product=hypothetical protein;protein_id=TMQ39215.1;transl_table=11
LNKO01000062.1	Genbank	gene	12806	13264	.	-	.	ID=gene-AO052_04915;Name=AO052_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04915
LNKO01000062.1	Protein Homology	CDS	12806	13264	.	-	0	ID=cds-TMQ39216.1;Parent=gene-AO052_04915;Dbxref=NCBI_GP:TMQ39216.1;Name=TMQ39216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995051.1;locus_tag=AO052_04915;product=hypothetical protein;protein_id=TMQ39216.1;transl_table=11
LNKO01000062.1	Genbank	gene	13257	13607	.	-	.	ID=gene-AO052_04920;Name=AO052_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04920
LNKO01000062.1	Protein Homology	CDS	13257	13607	.	-	0	ID=cds-TMQ39217.1;Parent=gene-AO052_04920;Dbxref=NCBI_GP:TMQ39217.1;Name=TMQ39217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643354.1;locus_tag=AO052_04920;product=hypothetical protein;protein_id=TMQ39217.1;transl_table=11
LNKO01000062.1	Genbank	gene	13611	13799	.	-	.	ID=gene-AO052_04925;Name=AO052_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04925
LNKO01000062.1	Protein Homology	CDS	13611	13799	.	-	0	ID=cds-TMQ39218.1;Parent=gene-AO052_04925;Dbxref=NCBI_GP:TMQ39218.1;Name=TMQ39218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995053.1;locus_tag=AO052_04925;product=hypothetical protein;protein_id=TMQ39218.1;transl_table=11
LNKO01000062.1	Genbank	gene	13802	14803	.	-	.	ID=gene-AO052_04930;Name=AO052_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04930
LNKO01000062.1	Protein Homology	CDS	13802	14803	.	-	0	ID=cds-TMQ39219.1;Parent=gene-AO052_04930;Dbxref=NCBI_GP:TMQ39219.1;Name=TMQ39219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995054.1;locus_tag=AO052_04930;product=DNA-binding protein;protein_id=TMQ39219.1;transl_table=11
LNKO01000062.1	Genbank	gene	14811	15230	.	-	.	ID=gene-AO052_04935;Name=AO052_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04935
LNKO01000062.1	Protein Homology	CDS	14811	15230	.	-	0	ID=cds-TMQ39220.1;Parent=gene-AO052_04935;Dbxref=NCBI_GP:TMQ39220.1;Name=TMQ39220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525596.1;locus_tag=AO052_04935;product=hypothetical protein;protein_id=TMQ39220.1;transl_table=11
LNKO01000062.1	Genbank	gene	15243	16316	.	-	.	ID=gene-AO052_04940;Name=AO052_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04940
LNKO01000062.1	Protein Homology	CDS	15243	16316	.	-	0	ID=cds-TMQ39221.1;Parent=gene-AO052_04940;Dbxref=NCBI_GP:TMQ39221.1;Name=TMQ39221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651153.1;locus_tag=AO052_04940;product=hypothetical protein;protein_id=TMQ39221.1;transl_table=11
LNKO01000062.1	Genbank	gene	16442	17659	.	-	.	ID=gene-AO052_04945;Name=AO052_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04945
LNKO01000062.1	Protein Homology	CDS	16442	17659	.	-	0	ID=cds-TMQ39222.1;Parent=gene-AO052_04945;Dbxref=NCBI_GP:TMQ39222.1;Name=TMQ39222.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692576.1;locus_tag=AO052_04945;product=phage head morphogenesis protein;protein_id=TMQ39222.1;transl_table=11
LNKO01000062.1	Genbank	gene	17640	18956	.	-	.	ID=gene-AO052_04950;Name=AO052_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04950
LNKO01000062.1	Protein Homology	CDS	17640	18956	.	-	0	ID=cds-TMQ39223.1;Parent=gene-AO052_04950;Dbxref=NCBI_GP:TMQ39223.1;Name=TMQ39223.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525598.1;locus_tag=AO052_04950;product=hypothetical protein;protein_id=TMQ39223.1;transl_table=11
LNKO01000062.1	Genbank	gene	18958	20307	.	-	.	ID=gene-AO052_04955;Name=AO052_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04955
LNKO01000062.1	Protein Homology	CDS	18958	20307	.	-	0	ID=cds-TMQ39224.1;Parent=gene-AO052_04955;Dbxref=NCBI_GP:TMQ39224.1;Name=TMQ39224.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525599.1;locus_tag=AO052_04955;product=terminase;protein_id=TMQ39224.1;transl_table=11
LNKO01000062.1	Genbank	gene	20288	20656	.	-	.	ID=gene-AO052_04960;Name=AO052_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04960
LNKO01000062.1	Protein Homology	CDS	20288	20656	.	-	0	ID=cds-TMQ39225.1;Parent=gene-AO052_04960;Dbxref=NCBI_GP:TMQ39225.1;Name=TMQ39225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651145.1;locus_tag=AO052_04960;product=LuxR family transcriptional regulator;protein_id=TMQ39225.1;transl_table=11
LNKO01000062.1	Genbank	gene	20714	20935	.	+	.	ID=gene-AO052_04965;Name=AO052_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04965
LNKO01000062.1	Protein Homology	CDS	20714	20935	.	+	0	ID=cds-TMQ39226.1;Parent=gene-AO052_04965;Dbxref=NCBI_GP:TMQ39226.1;Name=TMQ39226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651141.1;locus_tag=AO052_04965;product=hypothetical protein;protein_id=TMQ39226.1;transl_table=11
LNKO01000062.1	Genbank	gene	20932	22287	.	-	.	ID=gene-AO052_04970;Name=AO052_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04970
LNKO01000062.1	Protein Homology	CDS	20932	22287	.	-	0	ID=cds-TMQ39227.1;Parent=gene-AO052_04970;Dbxref=NCBI_GP:TMQ39227.1;Name=TMQ39227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054986.1;locus_tag=AO052_04970;product=hypothetical protein;protein_id=TMQ39227.1;transl_table=11
LNKO01000062.1	Genbank	gene	22299	22529	.	-	.	ID=gene-AO052_04975;Name=AO052_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04975
LNKO01000062.1	Protein Homology	CDS	22299	22529	.	-	0	ID=cds-TMQ39228.1;Parent=gene-AO052_04975;Dbxref=NCBI_GP:TMQ39228.1;Name=TMQ39228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651135.1;locus_tag=AO052_04975;product=hypothetical protein;protein_id=TMQ39228.1;transl_table=11
LNKO01000062.1	Genbank	gene	22504	22893	.	-	.	ID=gene-AO052_04980;Name=AO052_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04980
LNKO01000062.1	Protein Homology	CDS	22504	22893	.	-	0	ID=cds-TMQ39229.1;Parent=gene-AO052_04980;Dbxref=NCBI_GP:TMQ39229.1;Name=TMQ39229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527467.1;locus_tag=AO052_04980;product=hypothetical protein;protein_id=TMQ39229.1;transl_table=11
LNKO01000062.1	Genbank	gene	22890	23294	.	-	.	ID=gene-AO052_04985;Name=AO052_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04985
LNKO01000062.1	Protein Homology	CDS	22890	23294	.	-	0	ID=cds-TMQ39230.1;Parent=gene-AO052_04985;Dbxref=NCBI_GP:TMQ39230.1;Name=TMQ39230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272505.1;locus_tag=AO052_04985;product=peptidase M15;protein_id=TMQ39230.1;transl_table=11
LNKO01000062.1	Genbank	gene	23281	23607	.	-	.	ID=gene-AO052_04990;Name=AO052_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04990
LNKO01000062.1	Protein Homology	CDS	23281	23607	.	-	0	ID=cds-TMQ39231.1;Parent=gene-AO052_04990;Dbxref=NCBI_GP:TMQ39231.1;Name=TMQ39231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525603.1;locus_tag=AO052_04990;product=hypothetical protein;protein_id=TMQ39231.1;transl_table=11
LNKO01000062.1	Genbank	gene	24030	24998	.	-	.	ID=gene-AO052_04995;Name=AO052_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_04995
LNKO01000062.1	Protein Homology	CDS	24030	24998	.	-	0	ID=cds-TMQ39232.1;Parent=gene-AO052_04995;Dbxref=NCBI_GP:TMQ39232.1;Name=TMQ39232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527466.1;locus_tag=AO052_04995;product=XRE family transcriptional regulator;protein_id=TMQ39232.1;transl_table=11
LNKO01000062.1	Genbank	gene	25132	25338	.	+	.	ID=gene-AO052_05000;Name=AO052_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05000
LNKO01000062.1	Protein Homology	CDS	25132	25338	.	+	0	ID=cds-TMQ39233.1;Parent=gene-AO052_05000;Dbxref=NCBI_GP:TMQ39233.1;Name=TMQ39233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995067.1;locus_tag=AO052_05000;product=transcriptional regulator;protein_id=TMQ39233.1;transl_table=11
LNKO01000062.1	Genbank	gene	25382	25834	.	+	.	ID=gene-AO052_05005;Name=AO052_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05005
LNKO01000062.1	Protein Homology	CDS	25382	25834	.	+	0	ID=cds-TMQ39234.1;Parent=gene-AO052_05005;Dbxref=NCBI_GP:TMQ39234.1;Name=TMQ39234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651123.1;locus_tag=AO052_05005;product=hypothetical protein;protein_id=TMQ39234.1;transl_table=11
LNKO01000062.1	Genbank	gene	25880	26113	.	+	.	ID=gene-AO052_05010;Name=AO052_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05010
LNKO01000062.1	Protein Homology	CDS	25880	26113	.	+	0	ID=cds-TMQ39235.1;Parent=gene-AO052_05010;Dbxref=NCBI_GP:TMQ39235.1;Name=TMQ39235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525605.1;locus_tag=AO052_05010;product=hypothetical protein;protein_id=TMQ39235.1;transl_table=11
LNKO01000062.1	Genbank	gene	26115	26897	.	+	.	ID=gene-AO052_05015;Name=AO052_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05015
LNKO01000062.1	Protein Homology	CDS	26115	26897	.	+	0	ID=cds-TMQ39236.1;Parent=gene-AO052_05015;Dbxref=NCBI_GP:TMQ39236.1;Name=TMQ39236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272503.1;locus_tag=AO052_05015;product=DNA-binding protein;protein_id=TMQ39236.1;transl_table=11
LNKO01000062.1	Genbank	gene	26882	27523	.	+	.	ID=gene-AO052_05020;Name=AO052_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05020
LNKO01000062.1	Protein Homology	CDS	26882	27523	.	+	0	ID=cds-TMQ39237.1;Parent=gene-AO052_05020;Dbxref=NCBI_GP:TMQ39237.1;Name=TMQ39237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525607.1;locus_tag=AO052_05020;product=replication P;protein_id=TMQ39237.1;transl_table=11
LNKO01000062.1	Genbank	gene	27520	27744	.	+	.	ID=gene-AO052_05025;Name=AO052_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05025
LNKO01000062.1	Protein Homology	CDS	27520	27744	.	+	0	ID=cds-TMQ39238.1;Parent=gene-AO052_05025;Dbxref=NCBI_GP:TMQ39238.1;Name=TMQ39238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688841.1;locus_tag=AO052_05025;product=hypothetical protein;protein_id=TMQ39238.1;transl_table=11
LNKO01000062.1	Genbank	gene	27781	28128	.	+	.	ID=gene-AO052_05030;Name=AO052_05030;end_range=28128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05030;partial=true
LNKO01000062.1	Protein Homology	CDS	27781	28128	.	+	0	ID=cds-TMQ39239.1;Parent=gene-AO052_05030;Dbxref=NCBI_GP:TMQ39239.1;Name=TMQ39239.1;end_range=28128,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651114.1;locus_tag=AO052_05030;partial=true;product=recombinase;protein_id=TMQ39239.1;transl_table=11
##sequence-region LNKO01000063.1 1 10696
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000063.1	Genbank	region	1	10696	.	+	.	ID=LNKO01000063.1:1..10696;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000063.1	Genbank	gene	144	731	.	+	.	ID=gene-AO052_05035;Name=AO052_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05035
LNKO01000063.1	Protein Homology	CDS	144	731	.	+	0	ID=cds-TMQ39168.1;Parent=gene-AO052_05035;Dbxref=NCBI_GP:TMQ39168.1;Name=TMQ39168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651110.1;locus_tag=AO052_05035;product=recombinase NinG;protein_id=TMQ39168.1;transl_table=11
LNKO01000063.1	Genbank	gene	733	1098	.	+	.	ID=gene-AO052_05040;Name=AO052_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05040
LNKO01000063.1	Protein Homology	CDS	733	1098	.	+	0	ID=cds-TMQ39169.1;Parent=gene-AO052_05040;Dbxref=NCBI_GP:TMQ39169.1;Name=TMQ39169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688852.1;locus_tag=AO052_05040;product=RNA polymerase subunit sigma-70;protein_id=TMQ39169.1;transl_table=11
LNKO01000063.1	Genbank	gene	1137	1655	.	+	.	ID=gene-AO052_05045;Name=AO052_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05045
LNKO01000063.1	Protein Homology	CDS	1137	1655	.	+	0	ID=cds-TMQ39170.1;Parent=gene-AO052_05045;Dbxref=NCBI_GP:TMQ39170.1;Name=TMQ39170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525609.1;locus_tag=AO052_05045;product=hypothetical protein;protein_id=TMQ39170.1;transl_table=11
LNKO01000063.1	Genbank	gene	1766	2665	.	+	.	ID=gene-AO052_05050;Name=AO052_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05050
LNKO01000063.1	Protein Homology	CDS	1766	2665	.	+	0	ID=cds-TMQ39171.1;Parent=gene-AO052_05050;Dbxref=NCBI_GP:TMQ39171.1;Name=TMQ39171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525610.1;locus_tag=AO052_05050;product=hypothetical protein;protein_id=TMQ39171.1;transl_table=11
LNKO01000063.1	Genbank	gene	2824	3009	.	+	.	ID=gene-AO052_05055;Name=AO052_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05055
LNKO01000063.1	Protein Homology	CDS	2824	3009	.	+	0	ID=cds-TMQ39172.1;Parent=gene-AO052_05055;Dbxref=NCBI_GP:TMQ39172.1;Name=TMQ39172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643277.1;locus_tag=AO052_05055;product=hypothetical protein;protein_id=TMQ39172.1;transl_table=11
LNKO01000063.1	Genbank	gene	3392	3703	.	+	.	ID=gene-AO052_05060;Name=AO052_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05060
LNKO01000063.1	Protein Homology	CDS	3392	3703	.	+	0	ID=cds-TMQ39173.1;Parent=gene-AO052_05060;Dbxref=NCBI_GP:TMQ39173.1;Name=TMQ39173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651098.1;locus_tag=AO052_05060;product=hypothetical protein;protein_id=TMQ39173.1;transl_table=11
LNKO01000063.1	Genbank	gene	3824	4075	.	+	.	ID=gene-AO052_05065;Name=AO052_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05065
LNKO01000063.1	Protein Homology	CDS	3824	4075	.	+	0	ID=cds-TMQ39174.1;Parent=gene-AO052_05065;Dbxref=NCBI_GP:TMQ39174.1;Name=TMQ39174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651097.1;locus_tag=AO052_05065;product=hypothetical protein;protein_id=TMQ39174.1;transl_table=11
LNKO01000063.1	Genbank	gene	4065	5096	.	+	.	ID=gene-AO052_05070;Name=AO052_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05070
LNKO01000063.1	Protein Homology	CDS	4065	5096	.	+	0	ID=cds-TMQ39175.1;Parent=gene-AO052_05070;Dbxref=NCBI_GP:TMQ39175.1;Name=TMQ39175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054990.1;locus_tag=AO052_05070;product=endonuclease;protein_id=TMQ39175.1;transl_table=11
LNKO01000063.1	Genbank	gene	5187	5924	.	+	.	ID=gene-AO052_05075;Name=AO052_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05075
LNKO01000063.1	Protein Homology	CDS	5187	5924	.	+	0	ID=cds-TMQ39176.1;Parent=gene-AO052_05075;Dbxref=NCBI_GP:TMQ39176.1;Name=TMQ39176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527463.1;locus_tag=AO052_05075;product=DNA methylase N-4;protein_id=TMQ39176.1;transl_table=11
LNKO01000063.1	Genbank	gene	5938	6285	.	+	.	ID=gene-AO052_05080;Name=AO052_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05080
LNKO01000063.1	Protein Homology	CDS	5938	6285	.	+	0	ID=cds-TMQ39177.1;Parent=gene-AO052_05080;Dbxref=NCBI_GP:TMQ39177.1;Name=TMQ39177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525614.1;locus_tag=AO052_05080;product=hypothetical protein;protein_id=TMQ39177.1;transl_table=11
LNKO01000063.1	Genbank	gene	6282	6575	.	+	.	ID=gene-AO052_05085;Name=AO052_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05085
LNKO01000063.1	Protein Homology	CDS	6282	6575	.	+	0	ID=cds-TMQ39178.1;Parent=gene-AO052_05085;Dbxref=NCBI_GP:TMQ39178.1;Name=TMQ39178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692614.1;locus_tag=AO052_05085;product=hypothetical protein;protein_id=TMQ39178.1;transl_table=11
LNKO01000063.1	Genbank	gene	6588	7538	.	+	.	ID=gene-AO052_05090;Name=AO052_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05090
LNKO01000063.1	Protein Homology	CDS	6588	7538	.	+	0	ID=cds-TMQ39179.1;Parent=gene-AO052_05090;Dbxref=NCBI_GP:TMQ39179.1;Name=TMQ39179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525615.1;locus_tag=AO052_05090;product=recombinase;protein_id=TMQ39179.1;transl_table=11
LNKO01000063.1	Genbank	gene	7513	8163	.	+	.	ID=gene-AO052_05095;Name=AO052_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05095
LNKO01000063.1	Protein Homology	CDS	7513	8163	.	+	0	ID=cds-TMQ39180.1;Parent=gene-AO052_05095;Dbxref=NCBI_GP:TMQ39180.1;Name=TMQ39180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525616.1;locus_tag=AO052_05095;product=translocation protein TolB precursor;protein_id=TMQ39180.1;transl_table=11
LNKO01000063.1	Genbank	gene	8163	8597	.	+	.	ID=gene-AO052_05100;Name=AO052_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05100
LNKO01000063.1	Protein Homology	CDS	8163	8597	.	+	0	ID=cds-TMQ39181.1;Parent=gene-AO052_05100;Dbxref=NCBI_GP:TMQ39181.1;Name=TMQ39181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668705.1;locus_tag=AO052_05100;product=single-stranded DNA-binding protein;protein_id=TMQ39181.1;transl_table=11
LNKO01000063.1	Genbank	gene	8659	9681	.	+	.	ID=gene-AO052_05105;Name=AO052_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05105
LNKO01000063.1	Protein Homology	CDS	8659	9681	.	+	0	ID=cds-TMQ39182.1;Parent=gene-AO052_05105;Dbxref=NCBI_GP:TMQ39182.1;Name=TMQ39182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525618.1;locus_tag=AO052_05105;product=hypothetical protein;protein_id=TMQ39182.1;transl_table=11
LNKO01000063.1	Genbank	gene	9960	10529	.	+	.	ID=gene-AO052_05110;Name=AO052_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05110
LNKO01000063.1	Protein Homology	CDS	9960	10529	.	+	0	ID=cds-TMQ39183.1;Parent=gene-AO052_05110;Dbxref=NCBI_GP:TMQ39183.1;Name=TMQ39183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525619.1;locus_tag=AO052_05110;product=hypothetical protein;protein_id=TMQ39183.1;transl_table=11
##sequence-region LNKO01000064.1 1 16305
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000064.1	Genbank	region	1	16305	.	+	.	ID=LNKO01000064.1:1..16305;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000064.1	Genbank	gene	49	408	.	+	.	ID=gene-AO052_05115;Name=AO052_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05115
LNKO01000064.1	Protein Homology	CDS	49	408	.	+	0	ID=cds-TMQ39096.1;Parent=gene-AO052_05115;Dbxref=NCBI_GP:TMQ39096.1;Name=TMQ39096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525621.1;locus_tag=AO052_05115;product=hypothetical protein;protein_id=TMQ39096.1;transl_table=11
LNKO01000064.1	Genbank	gene	416	1690	.	+	.	ID=gene-AO052_05120;Name=AO052_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05120
LNKO01000064.1	Protein Homology	CDS	416	1690	.	+	0	ID=cds-TMQ39097.1;Parent=gene-AO052_05120;Dbxref=NCBI_GP:TMQ39097.1;Name=TMQ39097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054998.1;locus_tag=AO052_05120;product=cytosine methyltransferase;protein_id=TMQ39097.1;transl_table=11
LNKO01000064.1	Genbank	gene	1738	2154	.	+	.	ID=gene-AO052_05125;Name=AO052_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05125
LNKO01000064.1	Protein Homology	CDS	1738	2154	.	+	0	ID=cds-TMQ39098.1;Parent=gene-AO052_05125;Dbxref=NCBI_GP:TMQ39098.1;Name=TMQ39098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651292.1;locus_tag=AO052_05125;product=hypothetical protein;protein_id=TMQ39098.1;transl_table=11
LNKO01000064.1	Genbank	gene	2271	2759	.	+	.	ID=gene-AO052_05130;Name=AO052_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05130
LNKO01000064.1	Protein Homology	CDS	2271	2759	.	+	0	ID=cds-TMQ39109.1;Parent=gene-AO052_05130;Dbxref=NCBI_GP:TMQ39109.1;Name=TMQ39109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525622.1;locus_tag=AO052_05130;product=hypothetical protein;protein_id=TMQ39109.1;transl_table=11
LNKO01000064.1	Protein Homology	pseudogene	2749	3031	.	+	.	ID=gene-AO052_05135;Name=AO052_05135;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05135;pseudo=true
LNKO01000064.1	Genbank	gene	3024	3293	.	+	.	ID=gene-AO052_05140;Name=AO052_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05140
LNKO01000064.1	Protein Homology	CDS	3024	3293	.	+	0	ID=cds-TMQ39099.1;Parent=gene-AO052_05140;Dbxref=NCBI_GP:TMQ39099.1;Name=TMQ39099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668271.1;locus_tag=AO052_05140;product=hypothetical protein;protein_id=TMQ39099.1;transl_table=11
LNKO01000064.1	Genbank	gene	3297	3734	.	+	.	ID=gene-AO052_05145;Name=AO052_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05145
LNKO01000064.1	Protein Homology	CDS	3297	3734	.	+	0	ID=cds-TMQ39100.1;Parent=gene-AO052_05145;Dbxref=NCBI_GP:TMQ39100.1;Name=TMQ39100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525623.1;locus_tag=AO052_05145;product=hypothetical protein;protein_id=TMQ39100.1;transl_table=11
LNKO01000064.1	Genbank	gene	3864	4178	.	+	.	ID=gene-AO052_05150;Name=AO052_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05150
LNKO01000064.1	Protein Homology	CDS	3864	4178	.	+	0	ID=cds-TMQ39110.1;Parent=gene-AO052_05150;Dbxref=NCBI_GP:TMQ39110.1;Name=TMQ39110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651299.1;locus_tag=AO052_05150;product=hypothetical protein;protein_id=TMQ39110.1;transl_table=11
LNKO01000064.1	Genbank	gene	4076	5101	.	+	.	ID=gene-AO052_05155;Name=AO052_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05155
LNKO01000064.1	Protein Homology	CDS	4076	5101	.	+	0	ID=cds-TMQ39101.1;Parent=gene-AO052_05155;Dbxref=NCBI_GP:TMQ39101.1;Name=TMQ39101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641600.1;locus_tag=AO052_05155;product=integrase;protein_id=TMQ39101.1;transl_table=11
LNKO01000064.1	Genbank	gene	5206	5281	.	-	.	ID=gene-AO052_05160;Name=AO052_05160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05160
LNKO01000064.1	tRNAscan-SE	tRNA	5206	5281	.	-	.	ID=rna-AO052_05160;Parent=gene-AO052_05160;anticodon=(pos:complement(5246..5248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05160;product=tRNA-Lys
LNKO01000064.1	tRNAscan-SE	exon	5206	5281	.	-	.	ID=exon-AO052_05160-1;Parent=rna-AO052_05160;anticodon=(pos:complement(5246..5248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05160;product=tRNA-Lys
LNKO01000064.1	Genbank	gene	5305	5380	.	-	.	ID=gene-AO052_05165;Name=AO052_05165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05165
LNKO01000064.1	tRNAscan-SE	tRNA	5305	5380	.	-	.	ID=rna-AO052_05165;Parent=gene-AO052_05165;anticodon=(pos:complement(5345..5347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05165;product=tRNA-Lys
LNKO01000064.1	tRNAscan-SE	exon	5305	5380	.	-	.	ID=exon-AO052_05165-1;Parent=rna-AO052_05165;anticodon=(pos:complement(5345..5347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05165;product=tRNA-Lys
LNKO01000064.1	Genbank	gene	5432	5518	.	-	.	ID=gene-AO052_05170;Name=AO052_05170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05170
LNKO01000064.1	tRNAscan-SE	tRNA	5432	5518	.	-	.	ID=rna-AO052_05170;Parent=gene-AO052_05170;anticodon=(pos:complement(5482..5484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05170;product=tRNA-Leu
LNKO01000064.1	tRNAscan-SE	exon	5432	5518	.	-	.	ID=exon-AO052_05170-1;Parent=rna-AO052_05170;anticodon=(pos:complement(5482..5484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05170;product=tRNA-Leu
LNKO01000064.1	Genbank	gene	5523	5598	.	-	.	ID=gene-AO052_05175;Name=AO052_05175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05175
LNKO01000064.1	tRNAscan-SE	tRNA	5523	5598	.	-	.	ID=rna-AO052_05175;Parent=gene-AO052_05175;anticodon=(pos:complement(5563..5565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05175;product=tRNA-Gly
LNKO01000064.1	tRNAscan-SE	exon	5523	5598	.	-	.	ID=exon-AO052_05175-1;Parent=rna-AO052_05175;anticodon=(pos:complement(5563..5565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05175;product=tRNA-Gly
LNKO01000064.1	Genbank	gene	5755	6312	.	-	.	ID=gene-AO052_05180;Name=AO052_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05180
LNKO01000064.1	Protein Homology	CDS	5755	6312	.	-	0	ID=cds-TMQ39102.1;Parent=gene-AO052_05180;Dbxref=NCBI_GP:TMQ39102.1;Name=TMQ39102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658075.1;locus_tag=AO052_05180;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TMQ39102.1;transl_table=11
LNKO01000064.1	Genbank	gene	6587	7777	.	+	.	ID=gene-AO052_05185;Name=AO052_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05185
LNKO01000064.1	Protein Homology	CDS	6587	7777	.	+	0	ID=cds-TMQ39103.1;Parent=gene-AO052_05185;Dbxref=NCBI_GP:TMQ39103.1;Name=TMQ39103.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658073.1;locus_tag=AO052_05185;product=cystathionine beta-lyase;protein_id=TMQ39103.1;transl_table=11
LNKO01000064.1	Genbank	gene	8162	9523	.	+	.	ID=gene-AO052_05190;Name=AO052_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05190
LNKO01000064.1	Protein Homology	CDS	8162	9523	.	+	0	ID=cds-TMQ39104.1;Parent=gene-AO052_05190;Dbxref=NCBI_GP:TMQ39104.1;Name=TMQ39104.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649622.1;locus_tag=AO052_05190;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=TMQ39104.1;transl_table=11
LNKO01000064.1	Genbank	gene	9636	10142	.	+	.	ID=gene-AO052_05195;Name=AO052_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05195
LNKO01000064.1	Protein Homology	CDS	9636	10142	.	+	0	ID=cds-TMQ39105.1;Parent=gene-AO052_05195;Dbxref=NCBI_GP:TMQ39105.1;Name=TMQ39105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645122.1;locus_tag=AO052_05195;product=hypothetical protein;protein_id=TMQ39105.1;transl_table=11
LNKO01000064.1	Genbank	gene	10192	11199	.	-	.	ID=gene-AO052_05200;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=AO052_05200
LNKO01000064.1	Protein Homology	CDS	10192	11199	.	-	0	ID=cds-TMQ39106.1;Parent=gene-AO052_05200;Dbxref=NCBI_GP:TMQ39106.1;Name=TMQ39106.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527541.1;locus_tag=AO052_05200;product=zinc ABC transporter substrate-binding protein;protein_id=TMQ39106.1;transl_table=11
LNKO01000064.1	Genbank	gene	11377	12147	.	-	.	ID=gene-AO052_05205;Name=AO052_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05205
LNKO01000064.1	Protein Homology	CDS	11377	12147	.	-	0	ID=cds-TMQ39111.1;Parent=gene-AO052_05205;Dbxref=NCBI_GP:TMQ39111.1;Name=TMQ39111.1;Note=accepts sulfur from CsdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649626.1;locus_tag=AO052_05205;product=sulfur acceptor protein CsdL;protein_id=TMQ39111.1;transl_table=11
LNKO01000064.1	Genbank	gene	12147	13256	.	-	.	ID=gene-AO052_05210;Name=AO052_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05210
LNKO01000064.1	Protein Homology	CDS	12147	13256	.	-	0	ID=cds-TMQ39107.1;Parent=gene-AO052_05210;Dbxref=NCBI_GP:TMQ39107.1;Name=TMQ39107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687940.1;locus_tag=AO052_05210;product=murein transglycosylase;protein_id=TMQ39107.1;transl_table=11
LNKO01000064.1	Genbank	gene	13443	13519	.	+	.	ID=gene-AO052_05215;Name=AO052_05215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05215
LNKO01000064.1	tRNAscan-SE	tRNA	13443	13519	.	+	.	ID=rna-AO052_05215;Parent=gene-AO052_05215;anticodon=(pos:13477..13479);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05215;product=tRNA-Met
LNKO01000064.1	tRNAscan-SE	exon	13443	13519	.	+	.	ID=exon-AO052_05215-1;Parent=rna-AO052_05215;anticodon=(pos:13477..13479);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05215;product=tRNA-Met
LNKO01000064.1	Genbank	gene	13650	15785	.	+	.	ID=gene-AO052_05220;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=AO052_05220
LNKO01000064.1	Protein Homology	CDS	13650	15785	.	+	0	ID=cds-TMQ39108.1;Parent=gene-AO052_05220;Dbxref=NCBI_GP:TMQ39108.1;Name=TMQ39108.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFS2.1;locus_tag=AO052_05220;product=23S rRNA methyltransferase;protein_id=TMQ39108.1;transl_table=11
LNKO01000064.1	Genbank	gene	15934	16010	.	+	.	ID=gene-AO052_05225;Name=AO052_05225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05225
LNKO01000064.1	tRNAscan-SE	tRNA	15934	16010	.	+	.	ID=rna-AO052_05225;Parent=gene-AO052_05225;anticodon=(pos:15968..15970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05225;product=tRNA-Arg
LNKO01000064.1	tRNAscan-SE	exon	15934	16010	.	+	.	ID=exon-AO052_05225-1;Parent=rna-AO052_05225;anticodon=(pos:15968..15970);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05225;product=tRNA-Arg
LNKO01000064.1	Genbank	gene	16037	16112	.	+	.	ID=gene-AO052_05230;Name=AO052_05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05230
LNKO01000064.1	tRNAscan-SE	tRNA	16037	16112	.	+	.	ID=rna-AO052_05230;Parent=gene-AO052_05230;anticodon=(pos:16070..16072);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05230;product=tRNA-His
LNKO01000064.1	tRNAscan-SE	exon	16037	16112	.	+	.	ID=exon-AO052_05230-1;Parent=rna-AO052_05230;anticodon=(pos:16070..16072);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05230;product=tRNA-His
LNKO01000064.1	Genbank	gene	16134	16210	.	+	.	ID=gene-AO052_05235;Name=AO052_05235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05235
LNKO01000064.1	tRNAscan-SE	tRNA	16134	16210	.	+	.	ID=rna-AO052_05235;Parent=gene-AO052_05235;anticodon=(pos:16168..16170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05235;product=tRNA-Pro
LNKO01000064.1	tRNAscan-SE	exon	16134	16210	.	+	.	ID=exon-AO052_05235-1;Parent=rna-AO052_05235;anticodon=(pos:16168..16170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05235;product=tRNA-Pro
##sequence-region LNKO01000065.1 1 664
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000065.1	Genbank	region	1	664	.	+	.	ID=LNKO01000065.1:1..664;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000065.1	Genbank	gene	1	645	.	+	.	ID=gene-AO052_05240;Name=AO052_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05240;partial=true;start_range=.,1
LNKO01000065.1	Protein Homology	CDS	1	645	.	+	0	ID=cds-TMQ39075.1;Parent=gene-AO052_05240;Dbxref=NCBI_GP:TMQ39075.1;Name=TMQ39075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO052_05240;partial=true;product=hypothetical protein;protein_id=TMQ39075.1;start_range=.,1;transl_table=11
##sequence-region LNKO01000066.1 1 14830
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000066.1	Genbank	region	1	14830	.	+	.	ID=LNKO01000066.1:1..14830;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000066.1	Genbank	gene	107	946	.	+	.	ID=gene-AO052_05245;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AO052_05245
LNKO01000066.1	Protein Homology	CDS	107	946	.	+	0	ID=cds-TMQ39040.1;Parent=gene-AO052_05245;Dbxref=NCBI_GP:TMQ39040.1;Name=TMQ39040.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665224.1;locus_tag=AO052_05245;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=TMQ39040.1;transl_table=11
LNKO01000066.1	Genbank	gene	979	2103	.	-	.	ID=gene-AO052_05250;Name=AO052_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05250
LNKO01000066.1	Protein Homology	CDS	979	2103	.	-	0	ID=cds-TMQ39041.1;Parent=gene-AO052_05250;Dbxref=NCBI_GP:TMQ39041.1;Name=TMQ39041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995942.1;locus_tag=AO052_05250;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=TMQ39041.1;transl_table=11
LNKO01000066.1	Genbank	gene	2192	3112	.	-	.	ID=gene-AO052_05255;Name=AO052_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05255
LNKO01000066.1	Protein Homology	CDS	2192	3112	.	-	0	ID=cds-TMQ39042.1;Parent=gene-AO052_05255;Dbxref=NCBI_GP:TMQ39042.1;Name=TMQ39042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK43.1;locus_tag=AO052_05255;product=pseudouridine synthase;protein_id=TMQ39042.1;transl_table=11
LNKO01000066.1	Genbank	gene	3112	3498	.	-	.	ID=gene-AO052_05260;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AO052_05260
LNKO01000066.1	Protein Homology	CDS	3112	3498	.	-	0	ID=cds-TMQ39043.1;Parent=gene-AO052_05260;Dbxref=NCBI_GP:TMQ39043.1;Name=TMQ39043.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK42.1;locus_tag=AO052_05260;product=ribosome-binding factor A;protein_id=TMQ39043.1;transl_table=11
LNKO01000066.1	Genbank	gene	3659	5374	.	+	.	ID=gene-AO052_05265;Name=AO052_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05265
LNKO01000066.1	Protein Homology	CDS	3659	5374	.	+	0	ID=cds-TMQ39049.1;Parent=gene-AO052_05265;Dbxref=NCBI_GP:TMQ39049.1;Name=TMQ39049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687279.1;locus_tag=AO052_05265;product=restriction endonuclease subunit M;protein_id=TMQ39049.1;transl_table=11
LNKO01000066.1	Genbank	gene	5367	6680	.	+	.	ID=gene-AO052_05270;Name=AO052_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05270
LNKO01000066.1	Protein Homology	CDS	5367	6680	.	+	0	ID=cds-TMQ39044.1;Parent=gene-AO052_05270;Dbxref=NCBI_GP:TMQ39044.1;Name=TMQ39044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010589195.1;locus_tag=AO052_05270;product=hypothetical protein;protein_id=TMQ39044.1;transl_table=11
LNKO01000066.1	Genbank	gene	6958	10125	.	+	.	ID=gene-AO052_05275;Name=AO052_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05275
LNKO01000066.1	Protein Homology	CDS	6958	10125	.	+	0	ID=cds-TMQ39045.1;Parent=gene-AO052_05275;Dbxref=NCBI_GP:TMQ39045.1;Name=TMQ39045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657481.1;locus_tag=AO052_05275;product=restriction endonuclease subunit R;protein_id=TMQ39045.1;transl_table=11
LNKO01000066.1	Genbank	gene	10204	12738	.	-	.	ID=gene-AO052_05280;Name=AO052_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05280
LNKO01000066.1	Protein Homology	CDS	10204	12738	.	-	0	ID=cds-TMQ39046.1;Parent=gene-AO052_05280;Dbxref=NCBI_GP:TMQ39046.1;Name=TMQ39046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525762.1;locus_tag=AO052_05280;product=translation initiation factor IF-2;protein_id=TMQ39046.1;transl_table=11
LNKO01000066.1	Genbank	gene	12750	14237	.	-	.	ID=gene-AO052_05285;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AO052_05285
LNKO01000066.1	Protein Homology	CDS	12750	14237	.	-	0	ID=cds-TMQ39047.1;Parent=gene-AO052_05285;Dbxref=NCBI_GP:TMQ39047.1;Name=TMQ39047.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:SwissProt:P43915.1;locus_tag=AO052_05285;product=transcription elongation factor NusA;protein_id=TMQ39047.1;transl_table=11
LNKO01000066.1	Genbank	gene	14254	14709	.	-	.	ID=gene-AO052_05290;Name=AO052_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05290
LNKO01000066.1	Protein Homology	CDS	14254	14709	.	-	0	ID=cds-TMQ39048.1;Parent=gene-AO052_05290;Dbxref=NCBI_GP:TMQ39048.1;Name=TMQ39048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652912.1;locus_tag=AO052_05290;product=ribosome maturation protein RimP;protein_id=TMQ39048.1;transl_table=11
##sequence-region LNKO01000067.1 1 2853
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000067.1	Genbank	region	1	2853	.	+	.	ID=LNKO01000067.1:1..2853;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000067.1	Genbank	gene	100	176	.	-	.	ID=gene-AO052_05295;Name=AO052_05295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05295
LNKO01000067.1	tRNAscan-SE	tRNA	100	176	.	-	.	ID=rna-AO052_05295;Parent=gene-AO052_05295;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05295;product=tRNA-Met
LNKO01000067.1	tRNAscan-SE	exon	100	176	.	-	.	ID=exon-AO052_05295-1;Parent=rna-AO052_05295;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05295;product=tRNA-Met
LNKO01000067.1	Genbank	gene	1209	2465	.	+	.	ID=gene-AO052_05300;Name=AO052_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05300
LNKO01000067.1	Protein Homology	CDS	1209	2465	.	+	0	ID=cds-TMQ39033.1;Parent=gene-AO052_05300;Dbxref=NCBI_GP:TMQ39033.1;Name=TMQ39033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525759.1;locus_tag=AO052_05300;product=integrase;protein_id=TMQ39033.1;transl_table=11
##sequence-region LNKO01000068.1 1 7765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000068.1	Genbank	region	1	7765	.	+	.	ID=LNKO01000068.1:1..7765;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000068.1	Genbank	gene	1	876	.	+	.	ID=gene-AO052_05305;Name=AO052_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05305;partial=true;start_range=.,1
LNKO01000068.1	Protein Homology	CDS	1	876	.	+	0	ID=cds-TMQ38991.1;Parent=gene-AO052_05305;Dbxref=NCBI_GP:TMQ38991.1;Name=TMQ38991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525758.1;locus_tag=AO052_05305;partial=true;product=hypothetical protein;protein_id=TMQ38991.1;start_range=.,1;transl_table=11
LNKO01000068.1	Genbank	gene	1083	1331	.	+	.	ID=gene-AO052_05310;Name=AO052_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05310
LNKO01000068.1	Protein Homology	CDS	1083	1331	.	+	0	ID=cds-TMQ38992.1;Parent=gene-AO052_05310;Dbxref=NCBI_GP:TMQ38992.1;Name=TMQ38992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525757.1;locus_tag=AO052_05310;product=transcriptional regulator;protein_id=TMQ38992.1;transl_table=11
LNKO01000068.1	Genbank	gene	1342	1602	.	+	.	ID=gene-AO052_05315;Name=AO052_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05315
LNKO01000068.1	Protein Homology	CDS	1342	1602	.	+	0	ID=cds-TMQ38993.1;Parent=gene-AO052_05315;Dbxref=NCBI_GP:TMQ38993.1;Name=TMQ38993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995927.1;locus_tag=AO052_05315;product=transcriptional regulator;protein_id=TMQ38993.1;transl_table=11
LNKO01000068.1	Genbank	gene	1618	1911	.	+	.	ID=gene-AO052_05320;Name=AO052_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05320
LNKO01000068.1	Protein Homology	CDS	1618	1911	.	+	0	ID=cds-TMQ38994.1;Parent=gene-AO052_05320;Dbxref=NCBI_GP:TMQ38994.1;Name=TMQ38994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525755.1;locus_tag=AO052_05320;product=hypothetical protein;protein_id=TMQ38994.1;transl_table=11
LNKO01000068.1	Genbank	gene	1892	2359	.	+	.	ID=gene-AO052_05325;Name=AO052_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05325
LNKO01000068.1	Protein Homology	CDS	1892	2359	.	+	0	ID=cds-TMQ38995.1;Parent=gene-AO052_05325;Dbxref=NCBI_GP:TMQ38995.1;Name=TMQ38995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995924.1;locus_tag=AO052_05325;product=terminase;protein_id=TMQ38995.1;transl_table=11
LNKO01000068.1	Genbank	gene	2359	2655	.	+	.	ID=gene-AO052_05330;Name=AO052_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05330
LNKO01000068.1	Protein Homology	CDS	2359	2655	.	+	0	ID=cds-TMQ38996.1;Parent=gene-AO052_05330;Dbxref=NCBI_GP:TMQ38996.1;Name=TMQ38996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525753.1;locus_tag=AO052_05330;product=hypothetical protein;protein_id=TMQ38996.1;transl_table=11
LNKO01000068.1	Genbank	gene	2916	3878	.	+	.	ID=gene-AO052_05335;Name=AO052_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05335
LNKO01000068.1	Protein Homology	CDS	2916	3878	.	+	0	ID=cds-TMQ38997.1;Parent=gene-AO052_05335;Dbxref=NCBI_GP:TMQ38997.1;Name=TMQ38997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525752.1;locus_tag=AO052_05335;product=hypothetical protein;protein_id=TMQ38997.1;transl_table=11
LNKO01000068.1	Genbank	gene	3871	4242	.	+	.	ID=gene-AO052_05340;Name=AO052_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05340
LNKO01000068.1	Protein Homology	CDS	3871	4242	.	+	0	ID=cds-TMQ38998.1;Parent=gene-AO052_05340;Dbxref=NCBI_GP:TMQ38998.1;Name=TMQ38998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005594667.1;locus_tag=AO052_05340;product=hypothetical protein;protein_id=TMQ38998.1;transl_table=11
LNKO01000068.1	Genbank	gene	4232	4435	.	+	.	ID=gene-AO052_05345;Name=AO052_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05345
LNKO01000068.1	Protein Homology	CDS	4232	4435	.	+	0	ID=cds-TMQ38999.1;Parent=gene-AO052_05345;Dbxref=NCBI_GP:TMQ38999.1;Name=TMQ38999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995916.1;locus_tag=AO052_05345;product=hypothetical protein;protein_id=TMQ38999.1;transl_table=11
LNKO01000068.1	Genbank	gene	4422	5105	.	+	.	ID=gene-AO052_05350;Name=AO052_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05350
LNKO01000068.1	Protein Homology	CDS	4422	5105	.	+	0	ID=cds-TMQ39000.1;Parent=gene-AO052_05350;Dbxref=NCBI_GP:TMQ39000.1;Name=TMQ39000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525750.1;locus_tag=AO052_05350;product=hypothetical protein;protein_id=TMQ39000.1;transl_table=11
LNKO01000068.1	Genbank	gene	5098	5490	.	+	.	ID=gene-AO052_05355;Name=AO052_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05355
LNKO01000068.1	Protein Homology	CDS	5098	5490	.	+	0	ID=cds-TMQ39001.1;Parent=gene-AO052_05355;Dbxref=NCBI_GP:TMQ39001.1;Name=TMQ39001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671870.1;locus_tag=AO052_05355;product=hypothetical protein;protein_id=TMQ39001.1;transl_table=11
LNKO01000068.1	Genbank	gene	5478	7670	.	+	.	ID=gene-AO052_05360;Name=AO052_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05360
LNKO01000068.1	Protein Homology	CDS	5478	7670	.	+	0	ID=cds-TMQ39002.1;Parent=gene-AO052_05360;Dbxref=NCBI_GP:TMQ39002.1;Name=TMQ39002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525749.1;locus_tag=AO052_05360;product=DNA primase;protein_id=TMQ39002.1;transl_table=11
##sequence-region LNKO01000069.1 1 3712
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000069.1	Genbank	region	1	3712	.	+	.	ID=LNKO01000069.1:1..3712;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000069.1	Genbank	gene	537	875	.	+	.	ID=gene-AO052_05365;Name=AO052_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05365
LNKO01000069.1	Protein Homology	CDS	537	875	.	+	0	ID=cds-TMQ38971.1;Parent=gene-AO052_05365;Dbxref=NCBI_GP:TMQ38971.1;Name=TMQ38971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995912.1;locus_tag=AO052_05365;product=toxin;protein_id=TMQ38971.1;transl_table=11
LNKO01000069.1	Genbank	gene	872	1180	.	+	.	ID=gene-AO052_05370;Name=AO052_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05370
LNKO01000069.1	Protein Homology	CDS	872	1180	.	+	0	ID=cds-TMQ38972.1;Parent=gene-AO052_05370;Dbxref=NCBI_GP:TMQ38972.1;Name=TMQ38972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995911.1;locus_tag=AO052_05370;product=XRE family transcriptional regulator;protein_id=TMQ38972.1;transl_table=11
LNKO01000069.1	Protein Homology	pseudogene	1579	1888	.	-	.	ID=gene-AO052_05375;Name=AO052_05375;Note=disrupted;description=integrase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05375;pseudo=true
LNKO01000069.1	Genbank	gene	2249	2923	.	-	.	ID=gene-AO052_05380;Name=AO052_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05380
LNKO01000069.1	Protein Homology	CDS	2249	2923	.	-	0	ID=cds-TMQ38973.1;Parent=gene-AO052_05380;Dbxref=NCBI_GP:TMQ38973.1;Name=TMQ38973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702163.1;locus_tag=AO052_05380;product=acylneuraminate cytidylyltransferase;protein_id=TMQ38973.1;transl_table=11
LNKO01000069.1	Genbank	gene	3037	3699	.	+	.	ID=gene-AO052_05385;Name=AO052_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05385
LNKO01000069.1	Protein Homology	CDS	3037	3699	.	+	0	ID=cds-TMQ38974.1;Parent=gene-AO052_05385;Dbxref=NCBI_GP:TMQ38974.1;Name=TMQ38974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525747.1;locus_tag=AO052_05385;product=NAD(P)H-dependent oxidoreductase;protein_id=TMQ38974.1;transl_table=11
##sequence-region LNKO01000070.1 1 2014
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000070.1	Genbank	region	1	2014	.	+	.	ID=LNKO01000070.1:1..2014;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000070.1	Genbank	pseudogene	1	171	.	+	.	ID=gene-AO052_05390;Name=AO052_05390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05390;pseudo=true
LNKO01000070.1	Protein Homology	CDS	1	171	.	+	0	ID=cds-AO052_05390;Parent=gene-AO052_05390;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642329.1;locus_tag=AO052_05390;pseudo=true;transl_table=11
LNKO01000070.1	Genbank	gene	284	637	.	-	.	ID=gene-AO052_05395;Name=AO052_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05395
LNKO01000070.1	Protein Homology	CDS	284	637	.	-	0	ID=cds-TMQ38944.1;Parent=gene-AO052_05395;Dbxref=NCBI_GP:TMQ38944.1;Name=TMQ38944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646660.1;locus_tag=AO052_05395;product=growth inhibitor PemK;protein_id=TMQ38944.1;transl_table=11
LNKO01000070.1	Genbank	gene	637	906	.	-	.	ID=gene-AO052_05400;Name=AO052_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05400
LNKO01000070.1	Protein Homology	CDS	637	906	.	-	0	ID=cds-TMQ38945.1;Parent=gene-AO052_05400;Dbxref=NCBI_GP:TMQ38945.1;Name=TMQ38945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995905.1;locus_tag=AO052_05400;product=antitoxin MazE;protein_id=TMQ38945.1;transl_table=11
LNKO01000070.1	Genbank	gene	1131	2014	.	-	.	ID=gene-AO052_05405;Name=AO052_05405;end_range=2014,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05405;partial=true
LNKO01000070.1	Protein Homology	CDS	1131	2014	.	-	2	ID=cds-TMQ38946.1;Parent=gene-AO052_05405;Dbxref=NCBI_GP:TMQ38946.1;Name=TMQ38946.1;end_range=2014,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692272.1;locus_tag=AO052_05405;partial=true;product=sodium:proton antiporter;protein_id=TMQ38946.1;transl_table=11
##sequence-region LNKO01000071.1 1 3760
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000071.1	Genbank	region	1	3760	.	+	.	ID=LNKO01000071.1:1..3760;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000071.1	Genbank	pseudogene	1	228	.	-	.	ID=gene-AO052_05410;Name=AO052_05410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05410;pseudo=true
LNKO01000071.1	Protein Homology	CDS	1	228	.	-	0	ID=cds-AO052_05410;Parent=gene-AO052_05410;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628078.1;locus_tag=AO052_05410;pseudo=true;transl_table=11
LNKO01000071.1	Genbank	gene	385	750	.	-	.	ID=gene-AO052_05415;Name=AO052_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05415
LNKO01000071.1	Protein Homology	CDS	385	750	.	-	0	ID=cds-TMQ38928.1;Parent=gene-AO052_05415;Dbxref=NCBI_GP:TMQ38928.1;Name=TMQ38928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499965.1;locus_tag=AO052_05415;product=hypothetical protein;protein_id=TMQ38928.1;transl_table=11
LNKO01000071.1	Genbank	gene	763	1413	.	-	.	ID=gene-AO052_05420;Name=AO052_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05420
LNKO01000071.1	Protein Homology	CDS	763	1413	.	-	0	ID=cds-TMQ38929.1;Parent=gene-AO052_05420;Dbxref=NCBI_GP:TMQ38929.1;Name=TMQ38929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629835.1;locus_tag=AO052_05420;product=hypothetical protein;protein_id=TMQ38929.1;transl_table=11
LNKO01000071.1	Genbank	gene	1664	3718	.	+	.	ID=gene-AO052_05425;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AO052_05425
LNKO01000071.1	Protein Homology	CDS	1664	3718	.	+	0	ID=cds-TMQ38930.1;Parent=gene-AO052_05425;Dbxref=NCBI_GP:TMQ38930.1;Name=TMQ38930.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525743.1;locus_tag=AO052_05425;product=methionine--tRNA ligase;protein_id=TMQ38930.1;transl_table=11
##sequence-region LNKO01000072.1 1 18226
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000072.1	Genbank	region	1	18226	.	+	.	ID=LNKO01000072.1:1..18226;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000072.1	Genbank	gene	70	930	.	+	.	ID=gene-AO052_05430;Name=AO052_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05430
LNKO01000072.1	Protein Homology	CDS	70	930	.	+	0	ID=cds-TMQ38862.1;Parent=gene-AO052_05430;Dbxref=NCBI_GP:TMQ38862.1;Name=TMQ38862.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:E1X791.1;locus_tag=AO052_05430;product=tellurite resistance protein TehB;protein_id=TMQ38862.1;transl_table=11
LNKO01000072.1	Genbank	gene	974	1690	.	-	.	ID=gene-AO052_05435;Name=AO052_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05435
LNKO01000072.1	Protein Homology	CDS	974	1690	.	-	0	ID=cds-TMQ38863.1;Parent=gene-AO052_05435;Dbxref=NCBI_GP:TMQ38863.1;Name=TMQ38863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634714.1;locus_tag=AO052_05435;product=hydroxyacylglutathione hydrolase;protein_id=TMQ38863.1;transl_table=11
LNKO01000072.1	Genbank	gene	1742	2548	.	-	.	ID=gene-AO052_05440;Name=AO052_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05440
LNKO01000072.1	Protein Homology	CDS	1742	2548	.	-	0	ID=cds-TMQ38864.1;Parent=gene-AO052_05440;Dbxref=NCBI_GP:TMQ38864.1;Name=TMQ38864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646671.1;locus_tag=AO052_05440;product=hypothetical protein;protein_id=TMQ38864.1;transl_table=11
LNKO01000072.1	Genbank	gene	2784	3260	.	+	.	ID=gene-AO052_05445;Name=AO052_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05445
LNKO01000072.1	Protein Homology	CDS	2784	3260	.	+	0	ID=cds-TMQ38865.1;Parent=gene-AO052_05445;Dbxref=NCBI_GP:TMQ38865.1;Name=TMQ38865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629826.1;locus_tag=AO052_05445;product=hypothetical protein;protein_id=TMQ38865.1;transl_table=11
LNKO01000072.1	Genbank	gene	3397	5160	.	+	.	ID=gene-AO052_05450;Name=AO052_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05450
LNKO01000072.1	Protein Homology	CDS	3397	5160	.	+	0	ID=cds-TMQ38866.1;Parent=gene-AO052_05450;Dbxref=NCBI_GP:TMQ38866.1;Name=TMQ38866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692282.1;locus_tag=AO052_05450;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=TMQ38866.1;transl_table=11
LNKO01000072.1	Genbank	gene	5466	5702	.	-	.	ID=gene-AO052_05455;Name=AO052_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05455
LNKO01000072.1	Protein Homology	CDS	5466	5702	.	-	0	ID=cds-TMQ38867.1;Parent=gene-AO052_05455;Dbxref=NCBI_GP:TMQ38867.1;Name=TMQ38867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629822.1;locus_tag=AO052_05455;product=hypothetical protein;protein_id=TMQ38867.1;transl_table=11
LNKO01000072.1	Genbank	gene	5760	8408	.	+	.	ID=gene-AO052_05460;Name=AO052_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05460
LNKO01000072.1	Protein Homology	CDS	5760	8408	.	+	0	ID=cds-TMQ38868.1;Parent=gene-AO052_05460;Dbxref=NCBI_GP:TMQ38868.1;Name=TMQ38868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961907.1;locus_tag=AO052_05460;product=DNA gyrase subunit A;protein_id=TMQ38868.1;transl_table=11
LNKO01000072.1	Genbank	gene	8463	9539	.	-	.	ID=gene-AO052_05465;Name=AO052_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05465
LNKO01000072.1	Protein Homology	CDS	8463	9539	.	-	0	ID=cds-TMQ38869.1;Parent=gene-AO052_05465;Dbxref=NCBI_GP:TMQ38869.1;Name=TMQ38869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659627.1;locus_tag=AO052_05465;product=homoserine O-acetyltransferase;protein_id=TMQ38869.1;transl_table=11
LNKO01000072.1	Genbank	gene	9697	10377	.	+	.	ID=gene-AO052_05470;Name=AO052_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05470
LNKO01000072.1	Protein Homology	CDS	9697	10377	.	+	0	ID=cds-TMQ38870.1;Parent=gene-AO052_05470;Dbxref=NCBI_GP:TMQ38870.1;Name=TMQ38870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657563.1;locus_tag=AO052_05470;product=hypothetical protein;protein_id=TMQ38870.1;transl_table=11
LNKO01000072.1	Genbank	gene	11247	12551	.	-	.	ID=gene-AO052_05475;Name=AO052_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05475
LNKO01000072.1	Protein Homology	CDS	11247	12551	.	-	0	ID=cds-TMQ38871.1;Parent=gene-AO052_05475;Dbxref=NCBI_GP:TMQ38871.1;Name=TMQ38871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687313.1;locus_tag=AO052_05475;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMQ38871.1;transl_table=11
LNKO01000072.1	Genbank	gene	12553	13443	.	-	.	ID=gene-AO052_05480;Name=AO052_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05480
LNKO01000072.1	Protein Homology	CDS	12553	13443	.	-	0	ID=cds-TMQ38872.1;Parent=gene-AO052_05480;Dbxref=NCBI_GP:TMQ38872.1;Name=TMQ38872.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666747.1;locus_tag=AO052_05480;product=acetyl-CoA carboxylase subunit beta;protein_id=TMQ38872.1;transl_table=11
LNKO01000072.1	Genbank	gene	13637	15028	.	+	.	ID=gene-AO052_05485;Name=AO052_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05485
LNKO01000072.1	Protein Homology	CDS	13637	15028	.	+	0	ID=cds-TMQ38873.1;Parent=gene-AO052_05485;Dbxref=NCBI_GP:TMQ38873.1;Name=TMQ38873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666745.1;locus_tag=AO052_05485;product=serine peptidase;protein_id=TMQ38873.1;transl_table=11
LNKO01000072.1	Genbank	gene	15081	18226	.	-	.	ID=gene-AO052_05490;Name=AO052_05490;end_range=18226,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05490;partial=true
LNKO01000072.1	Protein Homology	CDS	15081	18226	.	-	2	ID=cds-TMQ38874.1;Parent=gene-AO052_05490;Dbxref=NCBI_GP:TMQ38874.1;Name=TMQ38874.1;end_range=18226,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054672.1;locus_tag=AO052_05490;partial=true;product=transcription-repair coupling factor;protein_id=TMQ38874.1;transl_table=11
##sequence-region LNKO01000073.1 1 1577
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000073.1	Genbank	region	1	1577	.	+	.	ID=LNKO01000073.1:1..1577;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000073.1	Genbank	pseudogene	1	290	.	-	.	ID=gene-AO052_05495;Name=AO052_05495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05495;pseudo=true
LNKO01000073.1	Protein Homology	CDS	1	290	.	-	0	ID=cds-AO052_05495;Parent=gene-AO052_05495;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005571499.1;locus_tag=AO052_05495;pseudo=true;transl_table=11
LNKO01000073.1	Genbank	pseudogene	562	1577	.	-	.	ID=gene-AO052_05500;Name=AO052_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05500;pseudo=true
LNKO01000073.1	Protein Homology	CDS	562	1577	.	-	2	ID=cds-AO052_05500;Parent=gene-AO052_05500;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44140.2;locus_tag=AO052_05500;pseudo=true;transl_table=11
##sequence-region LNKO01000074.1 1 7724
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000074.1	Genbank	region	1	7724	.	+	.	ID=LNKO01000074.1:1..7724;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000074.1	Genbank	pseudogene	1	952	.	-	.	ID=gene-AO052_05505;Name=AO052_05505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05505;pseudo=true
LNKO01000074.1	Protein Homology	CDS	1	952	.	-	0	ID=cds-AO052_05505;Parent=gene-AO052_05505;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995880.1;locus_tag=AO052_05505;pseudo=true;transl_table=11
LNKO01000074.1	Genbank	gene	957	1298	.	-	.	ID=gene-AO052_05510;Name=AO052_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05510
LNKO01000074.1	Protein Homology	CDS	957	1298	.	-	0	ID=cds-TMQ38823.1;Parent=gene-AO052_05510;Dbxref=NCBI_GP:TMQ38823.1;Name=TMQ38823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995879.1;locus_tag=AO052_05510;product=hypothetical protein;protein_id=TMQ38823.1;transl_table=11
LNKO01000074.1	Genbank	gene	1359	3029	.	-	.	ID=gene-AO052_05515;Name=AO052_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05515
LNKO01000074.1	Protein Homology	CDS	1359	3029	.	-	0	ID=cds-TMQ38824.1;Parent=gene-AO052_05515;Dbxref=NCBI_GP:TMQ38824.1;Name=TMQ38824.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710213.1;locus_tag=AO052_05515;product=ABC transporter ATP-binding protein;protein_id=TMQ38824.1;transl_table=11
LNKO01000074.1	Genbank	gene	3124	3387	.	-	.	ID=gene-AO052_05520;Name=AO052_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05520
LNKO01000074.1	Protein Homology	CDS	3124	3387	.	-	0	ID=cds-TMQ38825.1;Parent=gene-AO052_05520;Dbxref=NCBI_GP:TMQ38825.1;Name=TMQ38825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525737.1;locus_tag=AO052_05520;product=addiction module toxin RelE;protein_id=TMQ38825.1;transl_table=11
LNKO01000074.1	Genbank	gene	3384	3659	.	-	.	ID=gene-AO052_05525;Name=AO052_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05525
LNKO01000074.1	Protein Homology	CDS	3384	3659	.	-	0	ID=cds-TMQ38826.1;Parent=gene-AO052_05525;Dbxref=NCBI_GP:TMQ38826.1;Name=TMQ38826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525736.1;locus_tag=AO052_05525;product=translation repressor RelB;protein_id=TMQ38826.1;transl_table=11
LNKO01000074.1	Genbank	gene	4009	4629	.	+	.	ID=gene-AO052_05530;Name=AO052_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05530
LNKO01000074.1	Protein Homology	CDS	4009	4629	.	+	0	ID=cds-TMQ38827.1;Parent=gene-AO052_05530;Dbxref=NCBI_GP:TMQ38827.1;Name=TMQ38827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652991.1;locus_tag=AO052_05530;product=hypothetical protein;protein_id=TMQ38827.1;transl_table=11
LNKO01000074.1	Genbank	gene	4632	5606	.	+	.	ID=gene-AO052_05535;Name=AO052_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05535
LNKO01000074.1	Protein Homology	CDS	4632	5606	.	+	0	ID=cds-TMQ38828.1;Parent=gene-AO052_05535;Dbxref=NCBI_GP:TMQ38828.1;Name=TMQ38828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499992.1;locus_tag=AO052_05535;product=cobalt transporter;protein_id=TMQ38828.1;transl_table=11
LNKO01000074.1	Protein Homology	pseudogene	5692	6344	.	-	.	ID=gene-AO052_05540;Name=AO052_05540;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05540;pseudo=true
LNKO01000074.1	Genbank	gene	6510	7646	.	-	.	ID=gene-AO052_05545;Name=AO052_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05545
LNKO01000074.1	Protein Homology	CDS	6510	7646	.	-	0	ID=cds-TMQ38829.1;Parent=gene-AO052_05545;Dbxref=NCBI_GP:TMQ38829.1;Name=TMQ38829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525733.1;locus_tag=AO052_05545;product=hypothetical protein;protein_id=TMQ38829.1;transl_table=11
##sequence-region LNKO01000075.1 1 824
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000075.1	Genbank	region	1	824	.	+	.	ID=LNKO01000075.1:1..824;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000075.1	Genbank	pseudogene	53	824	.	-	.	ID=gene-AO052_05550;Name=AO052_05550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05550;pseudo=true
LNKO01000075.1	Protein Homology	CDS	53	824	.	-	1	ID=cds-AO052_05550;Parent=gene-AO052_05550;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527593.1;locus_tag=AO052_05550;pseudo=true;transl_table=11
##sequence-region LNKO01000076.1 1 8131
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000076.1	Genbank	region	1	8131	.	+	.	ID=LNKO01000076.1:1..8131;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000076.1	Genbank	gene	132	1037	.	-	.	ID=gene-AO052_05555;Name=AO052_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05555
LNKO01000076.1	Protein Homology	CDS	132	1037	.	-	0	ID=cds-TMQ38810.1;Parent=gene-AO052_05555;Dbxref=NCBI_GP:TMQ38810.1;Name=TMQ38810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961768.1;locus_tag=AO052_05555;product=bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] ligase;protein_id=TMQ38810.1;transl_table=11
LNKO01000076.1	Genbank	gene	1167	2633	.	+	.	ID=gene-AO052_05560;Name=AO052_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05560
LNKO01000076.1	Protein Homology	CDS	1167	2633	.	+	0	ID=cds-TMQ38811.1;Parent=gene-AO052_05560;Dbxref=NCBI_GP:TMQ38811.1;Name=TMQ38811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44334.1;locus_tag=AO052_05560;product=guanosine monophosphate reductase;protein_id=TMQ38811.1;transl_table=11
LNKO01000076.1	Genbank	gene	2743	4314	.	+	.	ID=gene-AO052_05565;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AO052_05565
LNKO01000076.1	Protein Homology	CDS	2743	4314	.	+	0	ID=cds-TMQ38812.1;Parent=gene-AO052_05565;Dbxref=NCBI_GP:TMQ38812.1;Name=TMQ38812.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=AO052_05565;product=GMP synthetase;protein_id=TMQ38812.1;transl_table=11
LNKO01000076.1	Genbank	gene	4376	5266	.	-	.	ID=gene-AO052_05570;Name=AO052_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05570
LNKO01000076.1	Protein Homology	CDS	4376	5266	.	-	0	ID=cds-TMQ38813.1;Parent=gene-AO052_05570;Dbxref=NCBI_GP:TMQ38813.1;Name=TMQ38813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701460.1;locus_tag=AO052_05570;product=transporter;protein_id=TMQ38813.1;transl_table=11
LNKO01000076.1	Genbank	gene	5386	5847	.	+	.	ID=gene-AO052_05575;Name=AO052_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05575
LNKO01000076.1	Protein Homology	CDS	5386	5847	.	+	0	ID=cds-TMQ38814.1;Parent=gene-AO052_05575;Dbxref=NCBI_GP:TMQ38814.1;Name=TMQ38814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648788.1;locus_tag=AO052_05575;product=AsnC family transcriptional regulator;protein_id=TMQ38814.1;transl_table=11
LNKO01000076.1	Genbank	gene	5886	7088	.	-	.	ID=gene-AO052_05580;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AO052_05580
LNKO01000076.1	Protein Homology	CDS	5886	7088	.	-	0	ID=cds-TMQ38815.1;Parent=gene-AO052_05580;Dbxref=NCBI_GP:TMQ38815.1;Name=TMQ38815.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668235.1;locus_tag=AO052_05580;product=sodium:proton antiporter;protein_id=TMQ38815.1;transl_table=11
LNKO01000076.1	Genbank	gene	7277	8131	.	+	.	ID=gene-AO052_05585;Name=AO052_05585;end_range=8131,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05585;partial=true
LNKO01000076.1	Protein Homology	CDS	7277	8131	.	+	0	ID=cds-TMQ38816.1;Parent=gene-AO052_05585;Dbxref=NCBI_GP:TMQ38816.1;Name=TMQ38816.1;end_range=8131,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527517.1;locus_tag=AO052_05585;partial=true;product=branched-chain amino acid transporter;protein_id=TMQ38816.1;transl_table=11
##sequence-region LNKO01000077.1 1 35960
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000077.1	Genbank	region	1	35960	.	+	.	ID=LNKO01000077.1:1..35960;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000077.1	Genbank	pseudogene	1	395	.	+	.	ID=gene-AO052_05590;Name=AO052_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05590;pseudo=true
LNKO01000077.1	Protein Homology	CDS	1	395	.	+	2	ID=cds-AO052_05590;Parent=gene-AO052_05590;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527517.1;locus_tag=AO052_05590;pseudo=true;transl_table=11
LNKO01000077.1	Genbank	gene	503	970	.	-	.	ID=gene-AO052_05595;Name=AO052_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05595
LNKO01000077.1	Protein Homology	CDS	503	970	.	-	0	ID=cds-TMQ38749.1;Parent=gene-AO052_05595;Dbxref=NCBI_GP:TMQ38749.1;Name=TMQ38749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996243.1;locus_tag=AO052_05595;product=hypothetical protein;protein_id=TMQ38749.1;transl_table=11
LNKO01000077.1	Genbank	gene	1046	1939	.	-	.	ID=gene-AO052_05600;Name=AO052_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05600
LNKO01000077.1	Protein Homology	CDS	1046	1939	.	-	0	ID=cds-TMQ38750.1;Parent=gene-AO052_05600;Dbxref=NCBI_GP:TMQ38750.1;Name=TMQ38750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527515.1;locus_tag=AO052_05600;product=glycosyl transferase family 8;protein_id=TMQ38750.1;transl_table=11
LNKO01000077.1	Genbank	gene	2212	4341	.	+	.	ID=gene-AO052_05605;Name=AO052_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05605
LNKO01000077.1	Protein Homology	CDS	2212	4341	.	+	0	ID=cds-TMQ38751.1;Parent=gene-AO052_05605;Dbxref=NCBI_GP:TMQ38751.1;Name=TMQ38751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634398.1;locus_tag=AO052_05605;product=polyribonucleotide nucleotidyltransferase;protein_id=TMQ38751.1;transl_table=11
LNKO01000077.1	Genbank	gene	4423	5367	.	+	.	ID=gene-AO052_05610;Name=AO052_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05610
LNKO01000077.1	Protein Homology	CDS	4423	5367	.	+	0	ID=cds-TMQ38752.1;Parent=gene-AO052_05610;Dbxref=NCBI_GP:TMQ38752.1;Name=TMQ38752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638902.1;locus_tag=AO052_05610;product=lipoprotein NlpI-like protein;protein_id=TMQ38752.1;transl_table=11
LNKO01000077.1	Genbank	gene	5487	7328	.	+	.	ID=gene-AO052_05615;Name=AO052_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05615
LNKO01000077.1	Protein Homology	CDS	5487	7328	.	+	0	ID=cds-TMQ38753.1;Parent=gene-AO052_05615;Dbxref=NCBI_GP:TMQ38753.1;Name=TMQ38753.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996239.1;locus_tag=AO052_05615;product=DEAD/DEAH box helicase;protein_id=TMQ38753.1;transl_table=11
LNKO01000077.1	Genbank	gene	7446	8894	.	+	.	ID=gene-AO052_05620;Name=AO052_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05620
LNKO01000077.1	Protein Homology	CDS	7446	8894	.	+	0	ID=cds-TMQ38754.1;Parent=gene-AO052_05620;Dbxref=NCBI_GP:TMQ38754.1;Name=TMQ38754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525495.1;locus_tag=AO052_05620;product=murein transglycosylase;protein_id=TMQ38754.1;transl_table=11
LNKO01000077.1	Genbank	gene	9185	9481	.	-	.	ID=gene-AO052_05625;Name=AO052_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05625
LNKO01000077.1	Protein Homology	CDS	9185	9481	.	-	0	ID=cds-TMQ38755.1;Parent=gene-AO052_05625;Dbxref=NCBI_GP:TMQ38755.1;Name=TMQ38755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648811.1;locus_tag=AO052_05625;product=dithiol-disulfide isomerase;protein_id=TMQ38755.1;transl_table=11
LNKO01000077.1	Genbank	gene	9500	9745	.	-	.	ID=gene-AO052_05630;Name=AO052_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05630
LNKO01000077.1	Protein Homology	CDS	9500	9745	.	-	0	ID=cds-TMQ38756.1;Parent=gene-AO052_05630;Dbxref=NCBI_GP:TMQ38756.1;Name=TMQ38756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701471.1;locus_tag=AO052_05630;product=Alternative ribosome-rescue factor A;protein_id=TMQ38756.1;transl_table=11
LNKO01000077.1	Genbank	gene	9813	10163	.	-	.	ID=gene-AO052_05635;Name=AO052_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05635
LNKO01000077.1	Protein Homology	CDS	9813	10163	.	-	0	ID=cds-TMQ38757.1;Parent=gene-AO052_05635;Dbxref=NCBI_GP:TMQ38757.1;Name=TMQ38757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634412.1;locus_tag=AO052_05635;product=arsenate reductase;protein_id=TMQ38757.1;transl_table=11
LNKO01000077.1	Genbank	gene	10241	11290	.	+	.	ID=gene-AO052_05640;Name=AO052_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05640
LNKO01000077.1	Protein Homology	CDS	10241	11290	.	+	0	ID=cds-TMQ38758.1;Parent=gene-AO052_05640;Dbxref=NCBI_GP:TMQ38758.1;Name=TMQ38758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500144.1;locus_tag=AO052_05640;product=permease;protein_id=TMQ38758.1;transl_table=11
LNKO01000077.1	Genbank	gene	11405	12379	.	-	.	ID=gene-AO052_05645;Name=AO052_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05645
LNKO01000077.1	Protein Homology	CDS	11405	12379	.	-	0	ID=cds-TMQ38759.1;Parent=gene-AO052_05645;Dbxref=NCBI_GP:TMQ38759.1;Name=TMQ38759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44590.1;locus_tag=AO052_05645;product=preprotein translocase subunit SecF;protein_id=TMQ38759.1;transl_table=11
LNKO01000077.1	Genbank	gene	12390	14240	.	-	.	ID=gene-AO052_05650;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AO052_05650
LNKO01000077.1	Protein Homology	CDS	12390	14240	.	-	0	ID=cds-TMQ38760.1;Parent=gene-AO052_05650;Dbxref=NCBI_GP:TMQ38760.1;Name=TMQ38760.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525496.1;locus_tag=AO052_05650;product=preprotein translocase subunit SecD;protein_id=TMQ38760.1;transl_table=11
LNKO01000077.1	Genbank	gene	14310	14603	.	-	.	ID=gene-AO052_05655;Name=AO052_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05655
LNKO01000077.1	Protein Homology	CDS	14310	14603	.	-	0	ID=cds-TMQ38761.1;Parent=gene-AO052_05655;Dbxref=NCBI_GP:TMQ38761.1;Name=TMQ38761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626741.1;locus_tag=AO052_05655;product=preprotein translocase subunit YajC;protein_id=TMQ38761.1;transl_table=11
LNKO01000077.1	Genbank	gene	14711	14932	.	-	.	ID=gene-AO052_05660;Name=AO052_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05660
LNKO01000077.1	Protein Homology	CDS	14711	14932	.	-	0	ID=cds-TMQ38762.1;Parent=gene-AO052_05660;Dbxref=NCBI_GP:TMQ38762.1;Name=TMQ38762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44593.1;locus_tag=AO052_05660;product=hypothetical protein;protein_id=TMQ38762.1;transl_table=11
LNKO01000077.1	Genbank	gene	14929	15447	.	-	.	ID=gene-AO052_05665;Name=AO052_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05665
LNKO01000077.1	Protein Homology	CDS	14929	15447	.	-	0	ID=cds-TMQ38763.1;Parent=gene-AO052_05665;Dbxref=NCBI_GP:TMQ38763.1;Name=TMQ38763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43971.1;locus_tag=AO052_05665;product=hypothetical protein;protein_id=TMQ38763.1;transl_table=11
LNKO01000077.1	Genbank	gene	15474	15956	.	-	.	ID=gene-AO052_05670;Name=AO052_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05670
LNKO01000077.1	Protein Homology	CDS	15474	15956	.	-	0	ID=cds-TMQ38777.1;Parent=gene-AO052_05670;Dbxref=NCBI_GP:TMQ38777.1;Name=TMQ38777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525499.1;locus_tag=AO052_05670;product=restriction endonuclease;protein_id=TMQ38777.1;transl_table=11
LNKO01000077.1	Genbank	gene	16048	19236	.	-	.	ID=gene-AO052_05675;Name=AO052_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05675
LNKO01000077.1	Protein Homology	CDS	16048	19236	.	-	0	ID=cds-TMQ38764.1;Parent=gene-AO052_05675;Dbxref=NCBI_GP:TMQ38764.1;Name=TMQ38764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527510.1;locus_tag=AO052_05675;product=DNA methyltransferase;protein_id=TMQ38764.1;transl_table=11
LNKO01000077.1	Genbank	gene	19326	20474	.	-	.	ID=gene-AO052_05680;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AO052_05680
LNKO01000077.1	Protein Homology	CDS	19326	20474	.	-	0	ID=cds-TMQ38765.1;Parent=gene-AO052_05680;Dbxref=NCBI_GP:TMQ38765.1;Name=TMQ38765.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701468.1;locus_tag=AO052_05680;product=queuine tRNA-ribosyltransferase;protein_id=TMQ38765.1;transl_table=11
LNKO01000077.1	Genbank	gene	20818	21909	.	-	.	ID=gene-AO052_05685;Name=AO052_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05685
LNKO01000077.1	Protein Homology	CDS	20818	21909	.	-	0	ID=cds-TMQ38766.1;Parent=gene-AO052_05685;Dbxref=NCBI_GP:TMQ38766.1;Name=TMQ38766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAP2.1;locus_tag=AO052_05685;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=TMQ38766.1;transl_table=11
LNKO01000077.1	Genbank	gene	22033	22479	.	-	.	ID=gene-AO052_05690;Name=AO052_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05690
LNKO01000077.1	Protein Homology	CDS	22033	22479	.	-	0	ID=cds-TMQ38767.1;Parent=gene-AO052_05690;Dbxref=NCBI_GP:TMQ38767.1;Name=TMQ38767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653406.1;locus_tag=AO052_05690;product=hypothetical protein;protein_id=TMQ38767.1;transl_table=11
LNKO01000077.1	Protein Homology	pseudogene	22618	26598	.	-	.	ID=gene-AO052_05695;Name=AO052_05695;Note=disrupted;description=S-adenosylmethionine tRNA ribosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05695;pseudo=true
LNKO01000077.1	Genbank	gene	26939	29770	.	-	.	ID=gene-AO052_05700;Name=AO052_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05700
LNKO01000077.1	Protein Homology	CDS	26939	29770	.	-	0	ID=cds-TMQ38768.1;Parent=gene-AO052_05700;Dbxref=NCBI_GP:TMQ38768.1;Name=TMQ38768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44410.1;locus_tag=AO052_05700;product=ABC-ATPase UvrA;protein_id=TMQ38768.1;transl_table=11
LNKO01000077.1	Genbank	gene	29924	30430	.	+	.	ID=gene-AO052_05705;Name=AO052_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05705
LNKO01000077.1	Protein Homology	CDS	29924	30430	.	+	0	ID=cds-TMQ38769.1;Parent=gene-AO052_05705;Dbxref=NCBI_GP:TMQ38769.1;Name=TMQ38769.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686675.1;locus_tag=AO052_05705;product=single-stranded DNA-binding protein;protein_id=TMQ38769.1;transl_table=11
LNKO01000077.1	Genbank	gene	30608	31390	.	-	.	ID=gene-AO052_05710;Name=AO052_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05710
LNKO01000077.1	Protein Homology	CDS	30608	31390	.	-	0	ID=cds-TMQ38770.1;Parent=gene-AO052_05710;Dbxref=NCBI_GP:TMQ38770.1;Name=TMQ38770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996220.1;locus_tag=AO052_05710;product=energy transducer TonB;protein_id=TMQ38770.1;transl_table=11
LNKO01000077.1	Genbank	gene	31400	31843	.	-	.	ID=gene-AO052_05715;Name=AO052_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05715
LNKO01000077.1	Protein Homology	CDS	31400	31843	.	-	0	ID=cds-TMQ38771.1;Parent=gene-AO052_05715;Dbxref=NCBI_GP:TMQ38771.1;Name=TMQ38771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656183.1;locus_tag=AO052_05715;product=biopolymer transporter ExbD;protein_id=TMQ38771.1;transl_table=11
LNKO01000077.1	Genbank	gene	31847	32299	.	-	.	ID=gene-AO052_05720;Name=AO052_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05720
LNKO01000077.1	Protein Homology	CDS	31847	32299	.	-	0	ID=cds-TMQ38772.1;Parent=gene-AO052_05720;Dbxref=NCBI_GP:TMQ38772.1;Name=TMQ38772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653401.1;locus_tag=AO052_05720;product=energy transducer TonB;protein_id=TMQ38772.1;transl_table=11
LNKO01000077.1	Genbank	gene	32468	32935	.	-	.	ID=gene-AO052_05725;Name=AO052_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05725
LNKO01000077.1	Protein Homology	CDS	32468	32935	.	-	0	ID=cds-TMQ38773.1;Parent=gene-AO052_05725;Dbxref=NCBI_GP:TMQ38773.1;Name=TMQ38773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500839.1;locus_tag=AO052_05725;product=bacterioferritin comigratory protein;protein_id=TMQ38773.1;transl_table=11
LNKO01000077.1	Genbank	gene	33041	33937	.	+	.	ID=gene-AO052_05730;Name=AO052_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05730
LNKO01000077.1	Protein Homology	CDS	33041	33937	.	+	0	ID=cds-TMQ38774.1;Parent=gene-AO052_05730;Dbxref=NCBI_GP:TMQ38774.1;Name=TMQ38774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996219.1;locus_tag=AO052_05730;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TMQ38774.1;transl_table=11
LNKO01000077.1	Genbank	gene	34048	34695	.	+	.	ID=gene-AO052_05735;Name=AO052_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05735
LNKO01000077.1	Protein Homology	CDS	34048	34695	.	+	0	ID=cds-TMQ38775.1;Parent=gene-AO052_05735;Dbxref=NCBI_GP:TMQ38775.1;Name=TMQ38775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43973.1;locus_tag=AO052_05735;product=outer membrane assembly protein BamC;protein_id=TMQ38775.1;transl_table=11
LNKO01000077.1	Genbank	gene	34865	35188	.	+	.	ID=gene-AO052_05740;Name=AO052_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05740
LNKO01000077.1	Protein Homology	CDS	34865	35188	.	+	0	ID=cds-TMQ38776.1;Parent=gene-AO052_05740;Dbxref=NCBI_GP:TMQ38776.1;Name=TMQ38776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054908.1;locus_tag=AO052_05740;product=ribosome-associated inhibitor A;protein_id=TMQ38776.1;transl_table=11
LNKO01000077.1	Genbank	gene	35618	35707	.	-	.	ID=gene-AO052_05745;Name=AO052_05745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05745
LNKO01000077.1	tRNAscan-SE	tRNA	35618	35707	.	-	.	ID=rna-AO052_05745;Parent=gene-AO052_05745;anticodon=(pos:complement(35671..35673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05745;product=tRNA-Ser
LNKO01000077.1	tRNAscan-SE	exon	35618	35707	.	-	.	ID=exon-AO052_05745-1;Parent=rna-AO052_05745;anticodon=(pos:complement(35671..35673));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05745;product=tRNA-Ser
##sequence-region LNKO01000078.1 1 3281
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000078.1	Genbank	region	1	3281	.	+	.	ID=LNKO01000078.1:1..3281;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000078.1	Genbank	gene	1	879	.	-	.	ID=gene-AO052_05750;Name=AO052_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05750;partial=true;start_range=.,1
LNKO01000078.1	Protein Homology	CDS	1	879	.	-	0	ID=cds-TMQ38701.1;Parent=gene-AO052_05750;Dbxref=NCBI_GP:TMQ38701.1;Name=TMQ38701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996217.1;locus_tag=AO052_05750;partial=true;product=glycosyl transferase;protein_id=TMQ38701.1;start_range=.,1;transl_table=11
LNKO01000078.1	Genbank	gene	973	1560	.	-	.	ID=gene-AO052_05755;Name=AO052_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05755
LNKO01000078.1	Protein Homology	CDS	973	1560	.	-	0	ID=cds-TMQ38702.1;Parent=gene-AO052_05755;Dbxref=NCBI_GP:TMQ38702.1;Name=TMQ38702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656195.1;locus_tag=AO052_05755;product=non-canonical purine NTP pyrophosphatase;protein_id=TMQ38702.1;transl_table=11
LNKO01000078.1	Genbank	gene	1572	2297	.	-	.	ID=gene-AO052_05760;Name=AO052_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05760
LNKO01000078.1	Protein Homology	CDS	1572	2297	.	-	0	ID=cds-TMQ38703.1;Parent=gene-AO052_05760;Dbxref=NCBI_GP:TMQ38703.1;Name=TMQ38703.1;Note=catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689436.1;locus_tag=AO052_05760;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=TMQ38703.1;transl_table=11
LNKO01000078.1	Genbank	gene	2374	3281	.	+	.	ID=gene-AO052_05765;Name=AO052_05765;end_range=3281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05765;partial=true
LNKO01000078.1	Protein Homology	CDS	2374	3281	.	+	0	ID=cds-TMQ38704.1;Parent=gene-AO052_05765;Dbxref=NCBI_GP:TMQ38704.1;Name=TMQ38704.1;end_range=3281,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701483.1;locus_tag=AO052_05765;partial=true;product=glycosyl transferase;protein_id=TMQ38704.1;transl_table=11
##sequence-region LNKO01000079.1 1 1075
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000079.1	Genbank	region	1	1075	.	+	.	ID=LNKO01000079.1:1..1075;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000079.1	Genbank	pseudogene	457	1075	.	+	.	ID=gene-AO052_05770;Name=AO052_05770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_05770;pseudo=true
LNKO01000079.1	Protein Homology	CDS	457	1075	.	+	0	ID=cds-AO052_05770;Parent=gene-AO052_05770;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44600.1;locus_tag=AO052_05770;pseudo=true;transl_table=11
##sequence-region LNKO01000080.1 1 35094
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000080.1	Genbank	region	1	35094	.	+	.	ID=LNKO01000080.1:1..35094;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000080.1	Genbank	gene	1	1547	.	+	.	ID=gene-AO052_05775;Name=AO052_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05775;partial=true;start_range=.,1
LNKO01000080.1	Protein Homology	CDS	1	1547	.	+	2	ID=cds-TMQ38658.1;Parent=gene-AO052_05775;Dbxref=NCBI_GP:TMQ38658.1;Name=TMQ38658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525511.1;locus_tag=AO052_05775;partial=true;product=ligand-gated channel;protein_id=TMQ38658.1;start_range=.,1;transl_table=11
LNKO01000080.1	Genbank	gene	1623	3320	.	+	.	ID=gene-AO052_05780;Name=AO052_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05780
LNKO01000080.1	Protein Homology	CDS	1623	3320	.	+	0	ID=cds-TMQ38659.1;Parent=gene-AO052_05780;Dbxref=NCBI_GP:TMQ38659.1;Name=TMQ38659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996213.1;locus_tag=AO052_05780;product=heme transporter CcmD;protein_id=TMQ38659.1;transl_table=11
LNKO01000080.1	Genbank	gene	3332	6115	.	+	.	ID=gene-AO052_05785;Name=AO052_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05785
LNKO01000080.1	Protein Homology	CDS	3332	6115	.	+	0	ID=cds-TMQ38660.1;Parent=gene-AO052_05785;Dbxref=NCBI_GP:TMQ38660.1;Name=TMQ38660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525513.1;locus_tag=AO052_05785;product=heme transporter CcmD;protein_id=TMQ38660.1;transl_table=11
LNKO01000080.1	Genbank	gene	6211	6567	.	-	.	ID=gene-AO052_05790;Name=AO052_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05790
LNKO01000080.1	Protein Homology	CDS	6211	6567	.	-	0	ID=cds-TMQ38661.1;Parent=gene-AO052_05790;Dbxref=NCBI_GP:TMQ38661.1;Name=TMQ38661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689448.1;locus_tag=AO052_05790;product=dihydroneopterin aldolase;protein_id=TMQ38661.1;transl_table=11
LNKO01000080.1	Genbank	gene	6650	7249	.	+	.	ID=gene-AO052_05795;Name=AO052_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05795
LNKO01000080.1	Protein Homology	CDS	6650	7249	.	+	0	ID=cds-TMQ38662.1;Parent=gene-AO052_05795;Dbxref=NCBI_GP:TMQ38662.1;Name=TMQ38662.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44603.1;locus_tag=AO052_05795;product=glycerol-3-phosphate acyltransferase;protein_id=TMQ38662.1;transl_table=11
LNKO01000080.1	Genbank	gene	7291	8994	.	+	.	ID=gene-AO052_05800;Name=AO052_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05800
LNKO01000080.1	Protein Homology	CDS	7291	8994	.	+	0	ID=cds-TMQ38663.1;Parent=gene-AO052_05800;Dbxref=NCBI_GP:TMQ38663.1;Name=TMQ38663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527503.1;locus_tag=AO052_05800;product=ATPase;protein_id=TMQ38663.1;transl_table=11
LNKO01000080.1	Genbank	gene	9004	10029	.	+	.	ID=gene-AO052_05805;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AO052_05805
LNKO01000080.1	Protein Homology	CDS	9004	10029	.	+	0	ID=cds-TMQ38664.1;Parent=gene-AO052_05805;Dbxref=NCBI_GP:TMQ38664.1;Name=TMQ38664.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668187.1;locus_tag=AO052_05805;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=TMQ38664.1;transl_table=11
LNKO01000080.1	Genbank	gene	10155	11000	.	+	.	ID=gene-AO052_05810;Name=AO052_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05810
LNKO01000080.1	Protein Homology	CDS	10155	11000	.	+	0	ID=cds-TMQ38665.1;Parent=gene-AO052_05810;Dbxref=NCBI_GP:TMQ38665.1;Name=TMQ38665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653377.1;locus_tag=AO052_05810;product=RNA polymerase factor sigma-32;protein_id=TMQ38665.1;transl_table=11
LNKO01000080.1	Genbank	gene	11040	11972	.	-	.	ID=gene-AO052_05815;Name=AO052_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05815
LNKO01000080.1	Protein Homology	CDS	11040	11972	.	-	0	ID=cds-TMQ38666.1;Parent=gene-AO052_05815;Dbxref=NCBI_GP:TMQ38666.1;Name=TMQ38666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636322.1;locus_tag=AO052_05815;product=tRNA-dihydrouridine synthase C;protein_id=TMQ38666.1;transl_table=11
LNKO01000080.1	Genbank	gene	11972	12838	.	-	.	ID=gene-AO052_05820;Name=AO052_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05820
LNKO01000080.1	Protein Homology	CDS	11972	12838	.	-	0	ID=cds-TMQ38667.1;Parent=gene-AO052_05820;Dbxref=NCBI_GP:TMQ38667.1;Name=TMQ38667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686695.1;locus_tag=AO052_05820;product=molecular chaperone DjlA;protein_id=TMQ38667.1;transl_table=11
LNKO01000080.1	Genbank	gene	12917	13558	.	-	.	ID=gene-AO052_05825;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AO052_05825
LNKO01000080.1	Protein Homology	CDS	12917	13558	.	-	0	ID=cds-TMQ38668.1;Parent=gene-AO052_05825;Dbxref=NCBI_GP:TMQ38668.1;Name=TMQ38668.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:SwissProt:P43855.1;locus_tag=AO052_05825;product=orotate phosphoribosyltransferase;protein_id=TMQ38668.1;transl_table=11
LNKO01000080.1	Genbank	gene	13582	14298	.	-	.	ID=gene-AO052_05830;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AO052_05830
LNKO01000080.1	Protein Homology	CDS	13582	14298	.	-	0	ID=cds-TMQ38669.1;Parent=gene-AO052_05830;Dbxref=NCBI_GP:TMQ38669.1;Name=TMQ38669.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668175.1;locus_tag=AO052_05830;product=ribonuclease PH;protein_id=TMQ38669.1;transl_table=11
LNKO01000080.1	Genbank	gene	14435	14510	.	-	.	ID=gene-AO052_05835;Name=AO052_05835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05835
LNKO01000080.1	tRNAscan-SE	tRNA	14435	14510	.	-	.	ID=rna-AO052_05835;Parent=gene-AO052_05835;anticodon=(pos:complement(14475..14477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05835;product=tRNA-Ala
LNKO01000080.1	tRNAscan-SE	exon	14435	14510	.	-	.	ID=exon-AO052_05835-1;Parent=rna-AO052_05835;anticodon=(pos:complement(14475..14477));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05835;product=tRNA-Ala
LNKO01000080.1	Genbank	gene	14591	16033	.	-	.	ID=gene-AO052_05840;Name=AO052_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05840
LNKO01000080.1	Protein Homology	CDS	14591	16033	.	-	0	ID=cds-TMQ38670.1;Parent=gene-AO052_05840;Dbxref=NCBI_GP:TMQ38670.1;Name=TMQ38670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525518.1;locus_tag=AO052_05840;product=glutamyl-tRNA synthetase;protein_id=TMQ38670.1;transl_table=11
LNKO01000080.1	Genbank	gene	16204	16279	.	+	.	ID=gene-AO052_05845;Name=AO052_05845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05845
LNKO01000080.1	tRNAscan-SE	tRNA	16204	16279	.	+	.	ID=rna-AO052_05845;Parent=gene-AO052_05845;anticodon=(pos:16237..16239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05845;product=tRNA-Val
LNKO01000080.1	tRNAscan-SE	exon	16204	16279	.	+	.	ID=exon-AO052_05845-1;Parent=rna-AO052_05845;anticodon=(pos:16237..16239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05845;product=tRNA-Val
LNKO01000080.1	Genbank	gene	16323	16398	.	+	.	ID=gene-AO052_05850;Name=AO052_05850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05850
LNKO01000080.1	tRNAscan-SE	tRNA	16323	16398	.	+	.	ID=rna-AO052_05850;Parent=gene-AO052_05850;anticodon=(pos:16356..16358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05850;product=tRNA-Val
LNKO01000080.1	tRNAscan-SE	exon	16323	16398	.	+	.	ID=exon-AO052_05850-1;Parent=rna-AO052_05850;anticodon=(pos:16356..16358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05850;product=tRNA-Val
LNKO01000080.1	Genbank	gene	16457	16532	.	+	.	ID=gene-AO052_05855;Name=AO052_05855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05855
LNKO01000080.1	tRNAscan-SE	tRNA	16457	16532	.	+	.	ID=rna-AO052_05855;Parent=gene-AO052_05855;anticodon=(pos:16490..16492);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05855;product=tRNA-Val
LNKO01000080.1	tRNAscan-SE	exon	16457	16532	.	+	.	ID=exon-AO052_05855-1;Parent=rna-AO052_05855;anticodon=(pos:16490..16492);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05855;product=tRNA-Val
LNKO01000080.1	Genbank	gene	16585	16660	.	+	.	ID=gene-AO052_05860;Name=AO052_05860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_05860
LNKO01000080.1	tRNAscan-SE	tRNA	16585	16660	.	+	.	ID=rna-AO052_05860;Parent=gene-AO052_05860;anticodon=(pos:16618..16620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05860;product=tRNA-Val
LNKO01000080.1	tRNAscan-SE	exon	16585	16660	.	+	.	ID=exon-AO052_05860-1;Parent=rna-AO052_05860;anticodon=(pos:16618..16620);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_05860;product=tRNA-Val
LNKO01000080.1	Genbank	gene	16783	18438	.	+	.	ID=gene-AO052_05865;Name=AO052_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05865
LNKO01000080.1	Protein Homology	CDS	16783	18438	.	+	0	ID=cds-TMQ38671.1;Parent=gene-AO052_05865;Dbxref=NCBI_GP:TMQ38671.1;Name=TMQ38671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668171.1;locus_tag=AO052_05865;product=hypothetical protein;protein_id=TMQ38671.1;transl_table=11
LNKO01000080.1	Genbank	gene	18458	19267	.	-	.	ID=gene-AO052_05870;Name=AO052_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05870
LNKO01000080.1	Protein Homology	CDS	18458	19267	.	-	0	ID=cds-TMQ38672.1;Parent=gene-AO052_05870;Dbxref=NCBI_GP:TMQ38672.1;Name=TMQ38672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44608.1;locus_tag=AO052_05870;product=hypothetical protein;protein_id=TMQ38672.1;transl_table=11
LNKO01000080.1	Genbank	gene	19264	19746	.	-	.	ID=gene-AO052_05875;Name=AO052_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05875
LNKO01000080.1	Protein Homology	CDS	19264	19746	.	-	0	ID=cds-TMQ38673.1;Parent=gene-AO052_05875;Dbxref=NCBI_GP:TMQ38673.1;Name=TMQ38673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UG95.1;locus_tag=AO052_05875;product=preprotein translocase subunit SecA;protein_id=TMQ38673.1;transl_table=11
LNKO01000080.1	Genbank	gene	19749	20411	.	-	.	ID=gene-AO052_05880;Name=AO052_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05880
LNKO01000080.1	Protein Homology	CDS	19749	20411	.	-	0	ID=cds-TMQ38674.1;Parent=gene-AO052_05880;Dbxref=NCBI_GP:TMQ38674.1;Name=TMQ38674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701548.1;locus_tag=AO052_05880;product=molybdenum cofactor sulfurase;protein_id=TMQ38674.1;transl_table=11
LNKO01000080.1	Genbank	gene	20648	21406	.	+	.	ID=gene-AO052_05885;Name=AO052_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05885
LNKO01000080.1	Protein Homology	CDS	20648	21406	.	+	0	ID=cds-TMQ38675.1;Parent=gene-AO052_05885;Dbxref=NCBI_GP:TMQ38675.1;Name=TMQ38675.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43770.2;locus_tag=AO052_05885;product=uridine phosphorylase;protein_id=TMQ38675.1;transl_table=11
LNKO01000080.1	Genbank	gene	21631	22947	.	-	.	ID=gene-AO052_05890;Name=AO052_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05890
LNKO01000080.1	Protein Homology	CDS	21631	22947	.	-	0	ID=cds-TMQ38676.1;Parent=gene-AO052_05890;Dbxref=NCBI_GP:TMQ38676.1;Name=TMQ38676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44610.1;locus_tag=AO052_05890;product=transporter;protein_id=TMQ38676.1;transl_table=11
LNKO01000080.1	Genbank	gene	23003	23746	.	-	.	ID=gene-AO052_05895;Name=AO052_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05895
LNKO01000080.1	Protein Homology	CDS	23003	23746	.	-	0	ID=cds-TMQ38677.1;Parent=gene-AO052_05895;Dbxref=NCBI_GP:TMQ38677.1;Name=TMQ38677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701550.1;locus_tag=AO052_05895;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=TMQ38677.1;transl_table=11
LNKO01000080.1	Genbank	gene	23807	25513	.	-	.	ID=gene-AO052_05900;Name=AO052_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05900
LNKO01000080.1	Protein Homology	CDS	23807	25513	.	-	0	ID=cds-TMQ38678.1;Parent=gene-AO052_05900;Dbxref=NCBI_GP:TMQ38678.1;Name=TMQ38678.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNQ7.1;locus_tag=AO052_05900;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=TMQ38678.1;transl_table=11
LNKO01000080.1	Genbank	gene	25529	26800	.	-	.	ID=gene-AO052_05905;Name=AO052_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05905
LNKO01000080.1	Protein Homology	CDS	25529	26800	.	-	0	ID=cds-TMQ38679.1;Parent=gene-AO052_05905;Dbxref=NCBI_GP:TMQ38679.1;Name=TMQ38679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693020.1;locus_tag=AO052_05905;product=isochorismate synthase;protein_id=TMQ38679.1;transl_table=11
LNKO01000080.1	Genbank	gene	26734	27003	.	+	.	ID=gene-AO052_05910;Name=AO052_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05910
LNKO01000080.1	Protein Homology	CDS	26734	27003	.	+	0	ID=cds-TMQ38680.1;Parent=gene-AO052_05910;Dbxref=NCBI_GP:TMQ38680.1;Name=TMQ38680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648936.1;locus_tag=AO052_05910;product=hypothetical protein;protein_id=TMQ38680.1;transl_table=11
LNKO01000080.1	Genbank	gene	26957	28171	.	+	.	ID=gene-AO052_05915;Name=AO052_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05915
LNKO01000080.1	Protein Homology	CDS	26957	28171	.	+	0	ID=cds-TMQ38681.1;Parent=gene-AO052_05915;Dbxref=NCBI_GP:TMQ38681.1;Name=TMQ38681.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271965.1;locus_tag=AO052_05915;product=aminotransferase;protein_id=TMQ38681.1;transl_table=11
LNKO01000080.1	Genbank	gene	28288	29544	.	+	.	ID=gene-AO052_05920;Name=AO052_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05920
LNKO01000080.1	Protein Homology	CDS	28288	29544	.	+	0	ID=cds-TMQ38682.1;Parent=gene-AO052_05920;Dbxref=NCBI_GP:TMQ38682.1;Name=TMQ38682.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996193.1;locus_tag=AO052_05920;product=tryptophan permease;protein_id=TMQ38682.1;transl_table=11
LNKO01000080.1	Genbank	gene	29653	31020	.	-	.	ID=gene-AO052_05925;Name=AO052_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05925
LNKO01000080.1	Protein Homology	CDS	29653	31020	.	-	0	ID=cds-TMQ38683.1;Parent=gene-AO052_05925;Dbxref=NCBI_GP:TMQ38683.1;Name=TMQ38683.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525528.1;locus_tag=AO052_05925;product=serine dehydratase;protein_id=TMQ38683.1;transl_table=11
LNKO01000080.1	Genbank	gene	31055	32293	.	-	.	ID=gene-AO052_05930;Name=AO052_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05930
LNKO01000080.1	Protein Homology	CDS	31055	32293	.	-	0	ID=cds-TMQ38684.1;Parent=gene-AO052_05930;Dbxref=NCBI_GP:TMQ38684.1;Name=TMQ38684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668945.1;locus_tag=AO052_05930;product=serine transporter;protein_id=TMQ38684.1;transl_table=11
LNKO01000080.1	Genbank	gene	32516	34684	.	-	.	ID=gene-AO052_05935;Name=AO052_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05935
LNKO01000080.1	Protein Homology	CDS	32516	34684	.	-	0	ID=cds-TMQ38685.1;Parent=gene-AO052_05935;Dbxref=NCBI_GP:TMQ38685.1;Name=TMQ38685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996190.1;locus_tag=AO052_05935;product=copper-transporting ATPase;protein_id=TMQ38685.1;transl_table=11
LNKO01000080.1	Genbank	gene	34659	34865	.	-	.	ID=gene-AO052_05940;Name=AO052_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05940
LNKO01000080.1	Protein Homology	CDS	34659	34865	.	-	0	ID=cds-TMQ38686.1;Parent=gene-AO052_05940;Dbxref=NCBI_GP:TMQ38686.1;Name=TMQ38686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AO052_05940;product=hypothetical protein;protein_id=TMQ38686.1;transl_table=11
LNKO01000080.1	Genbank	gene	34951	35094	.	-	.	ID=gene-AO052_05945;Name=AO052_05945;end_range=35094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05945;partial=true
LNKO01000080.1	Protein Homology	CDS	34951	35094	.	-	0	ID=cds-TMQ38687.1;Parent=gene-AO052_05945;Dbxref=NCBI_GP:TMQ38687.1;Name=TMQ38687.1;end_range=35094,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693124.1;locus_tag=AO052_05945;partial=true;product=hypothetical protein;protein_id=TMQ38687.1;transl_table=11
##sequence-region LNKO01000081.1 1 21038
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000081.1	Genbank	region	1	21038	.	+	.	ID=LNKO01000081.1:1..21038;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000081.1	Genbank	gene	41	247	.	-	.	ID=gene-AO052_05950;Name=AO052_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05950
LNKO01000081.1	Protein Homology	CDS	41	247	.	-	0	ID=cds-TMQ38604.1;Parent=gene-AO052_05950;Dbxref=NCBI_GP:TMQ38604.1;Name=TMQ38604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AO052_05950;product=hypothetical protein;protein_id=TMQ38604.1;transl_table=11
LNKO01000081.1	Genbank	gene	324	710	.	+	.	ID=gene-AO052_05955;Name=AO052_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05955
LNKO01000081.1	Protein Homology	CDS	324	710	.	+	0	ID=cds-TMQ38605.1;Parent=gene-AO052_05955;Dbxref=NCBI_GP:TMQ38605.1;Name=TMQ38605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44617.1;locus_tag=AO052_05955;product=Cu(I)-responsive transcriptional regulator;protein_id=TMQ38605.1;transl_table=11
LNKO01000081.1	Genbank	gene	724	1041	.	-	.	ID=gene-AO052_05960;Name=AO052_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05960
LNKO01000081.1	Protein Homology	CDS	724	1041	.	-	0	ID=cds-TMQ38606.1;Parent=gene-AO052_05960;Dbxref=NCBI_GP:TMQ38606.1;Name=TMQ38606.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44618.2;locus_tag=AO052_05960;product=transcriptional repressor protein MetJ;protein_id=TMQ38606.1;transl_table=11
LNKO01000081.1	Genbank	gene	1289	2551	.	+	.	ID=gene-AO052_05965;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AO052_05965
LNKO01000081.1	Protein Homology	CDS	1289	2551	.	+	0	ID=cds-TMQ38607.1;Parent=gene-AO052_05965;Dbxref=NCBI_GP:TMQ38607.1;Name=TMQ38607.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668956.1;locus_tag=AO052_05965;product=transcription termination factor Rho;protein_id=TMQ38607.1;transl_table=11
LNKO01000081.1	Genbank	gene	2606	3298	.	-	.	ID=gene-AO052_05970;Name=AO052_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05970
LNKO01000081.1	Protein Homology	CDS	2606	3298	.	-	0	ID=cds-TMQ38608.1;Parent=gene-AO052_05970;Dbxref=NCBI_GP:TMQ38608.1;Name=TMQ38608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666688.1;locus_tag=AO052_05970;product=peptidase A24;protein_id=TMQ38608.1;transl_table=11
LNKO01000081.1	Genbank	gene	3295	4512	.	-	.	ID=gene-AO052_05975;Name=AO052_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05975
LNKO01000081.1	Protein Homology	CDS	3295	4512	.	-	0	ID=cds-TMQ38609.1;Parent=gene-AO052_05975;Dbxref=NCBI_GP:TMQ38609.1;Name=TMQ38609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550481.1;locus_tag=AO052_05975;product=type II secretion system protein F;protein_id=TMQ38609.1;transl_table=11
LNKO01000081.1	Genbank	gene	4509	5903	.	-	.	ID=gene-AO052_05980;Name=AO052_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05980
LNKO01000081.1	Protein Homology	CDS	4509	5903	.	-	0	ID=cds-TMQ38610.1;Parent=gene-AO052_05980;Dbxref=NCBI_GP:TMQ38610.1;Name=TMQ38610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656265.1;locus_tag=AO052_05980;product=protein transporter HofB;protein_id=TMQ38610.1;transl_table=11
LNKO01000081.1	Genbank	gene	5900	6349	.	-	.	ID=gene-AO052_05985;Name=AO052_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05985
LNKO01000081.1	Protein Homology	CDS	5900	6349	.	-	0	ID=cds-TMQ38611.1;Parent=gene-AO052_05985;Dbxref=NCBI_GP:TMQ38611.1;Name=TMQ38611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996184.1;locus_tag=AO052_05985;product=prepilin peptidase;protein_id=TMQ38611.1;transl_table=11
LNKO01000081.1	Genbank	gene	6464	7024	.	+	.	ID=gene-AO052_05990;Name=AO052_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05990
LNKO01000081.1	Protein Homology	CDS	6464	7024	.	+	0	ID=cds-TMQ38612.1;Parent=gene-AO052_05990;Dbxref=NCBI_GP:TMQ38612.1;Name=TMQ38612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550480.1;locus_tag=AO052_05990;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=TMQ38612.1;transl_table=11
LNKO01000081.1	Genbank	gene	7647	8546	.	+	.	ID=gene-AO052_05995;Name=AO052_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_05995
LNKO01000081.1	Protein Homology	CDS	7647	8546	.	+	0	ID=cds-TMQ38613.1;Parent=gene-AO052_05995;Dbxref=NCBI_GP:TMQ38613.1;Name=TMQ38613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57368.1;locus_tag=AO052_05995;product=magnesium/cobalt efflux protein;protein_id=TMQ38613.1;transl_table=11
LNKO01000081.1	Genbank	gene	8530	10098	.	+	.	ID=gene-AO052_06000;Name=AO052_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06000
LNKO01000081.1	Protein Homology	CDS	8530	10098	.	+	0	ID=cds-TMQ38614.1;Parent=gene-AO052_06000;Dbxref=NCBI_GP:TMQ38614.1;Name=TMQ38614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666677.1;locus_tag=AO052_06000;product=apolipoprotein N-acyltransferase;protein_id=TMQ38614.1;transl_table=11
LNKO01000081.1	Genbank	gene	10148	10885	.	+	.	ID=gene-AO052_06005;Name=AO052_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06005
LNKO01000081.1	Protein Homology	CDS	10148	10885	.	+	0	ID=cds-TMQ38615.1;Parent=gene-AO052_06005;Dbxref=NCBI_GP:TMQ38615.1;Name=TMQ38615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44627.1;locus_tag=AO052_06005;product=16S rRNA methyltransferase;protein_id=TMQ38615.1;transl_table=11
LNKO01000081.1	Genbank	gene	10882	11442	.	+	.	ID=gene-AO052_06010;Name=AO052_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06010
LNKO01000081.1	Protein Homology	CDS	10882	11442	.	+	0	ID=cds-TMQ38616.1;Parent=gene-AO052_06010;Dbxref=NCBI_GP:TMQ38616.1;Name=TMQ38616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996179.1;locus_tag=AO052_06010;product=hypothetical protein;protein_id=TMQ38616.1;transl_table=11
LNKO01000081.1	Genbank	gene	11442	11861	.	+	.	ID=gene-AO052_06015;Name=AO052_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06015
LNKO01000081.1	Protein Homology	CDS	11442	11861	.	+	0	ID=cds-TMQ38617.1;Parent=gene-AO052_06015;Dbxref=NCBI_GP:TMQ38617.1;Name=TMQ38617.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656295.1;locus_tag=AO052_06015;product=Holliday junction resolvase;protein_id=TMQ38617.1;transl_table=11
LNKO01000081.1	Genbank	gene	11911	12819	.	-	.	ID=gene-AO052_06020;Name=AO052_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06020
LNKO01000081.1	Protein Homology	CDS	11911	12819	.	-	0	ID=cds-TMQ38618.1;Parent=gene-AO052_06020;Dbxref=NCBI_GP:TMQ38618.1;Name=TMQ38618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662977.1;locus_tag=AO052_06020;product=recombination-associated protein RdgC;protein_id=TMQ38618.1;transl_table=11
LNKO01000081.1	Genbank	gene	12885	13700	.	+	.	ID=gene-AO052_06025;Name=AO052_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06025
LNKO01000081.1	Protein Homology	CDS	12885	13700	.	+	0	ID=cds-TMQ38619.1;Parent=gene-AO052_06025;Dbxref=NCBI_GP:TMQ38619.1;Name=TMQ38619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668983.1;locus_tag=AO052_06025;product=pyrroline-5-carboxylate reductase;protein_id=TMQ38619.1;transl_table=11
LNKO01000081.1	Genbank	gene	13700	14866	.	+	.	ID=gene-AO052_06030;Name=AO052_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06030
LNKO01000081.1	Protein Homology	CDS	13700	14866	.	+	0	ID=cds-TMQ38620.1;Parent=gene-AO052_06030;Dbxref=NCBI_GP:TMQ38620.1;Name=TMQ38620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525539.1;locus_tag=AO052_06030;product=MFS transporter;protein_id=TMQ38620.1;transl_table=11
LNKO01000081.1	Genbank	gene	14897	15790	.	+	.	ID=gene-AO052_06035;Name=AO052_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06035
LNKO01000081.1	Protein Homology	CDS	14897	15790	.	+	0	ID=cds-TMQ38621.1;Parent=gene-AO052_06035;Dbxref=NCBI_GP:TMQ38621.1;Name=TMQ38621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44630.1;locus_tag=AO052_06035;product=recombinase XerD;protein_id=TMQ38621.1;transl_table=11
LNKO01000081.1	Genbank	gene	15963	16250	.	+	.	ID=gene-AO052_06040;Name=AO052_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06040
LNKO01000081.1	Protein Homology	CDS	15963	16250	.	+	0	ID=cds-TMQ38622.1;Parent=gene-AO052_06040;Dbxref=NCBI_GP:TMQ38622.1;Name=TMQ38622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43982.1;locus_tag=AO052_06040;product=hypothetical protein;protein_id=TMQ38622.1;transl_table=11
LNKO01000081.1	Genbank	gene	16302	17309	.	-	.	ID=gene-AO052_06045;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AO052_06045
LNKO01000081.1	Protein Homology	CDS	16302	17309	.	-	0	ID=cds-TMQ38623.1;Parent=gene-AO052_06045;Dbxref=NCBI_GP:TMQ38623.1;Name=TMQ38623.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701568.1;locus_tag=AO052_06045;product=ATP-dependent DNA helicase RuvB;protein_id=TMQ38623.1;transl_table=11
LNKO01000081.1	Genbank	gene	17317	17931	.	-	.	ID=gene-AO052_06050;Name=AO052_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06050
LNKO01000081.1	Protein Homology	CDS	17317	17931	.	-	0	ID=cds-TMQ38624.1;Parent=gene-AO052_06050;Dbxref=NCBI_GP:TMQ38624.1;Name=TMQ38624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAH7.1;locus_tag=AO052_06050;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=TMQ38624.1;transl_table=11
LNKO01000081.1	Genbank	gene	17994	18566	.	-	.	ID=gene-AO052_06055;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AO052_06055
LNKO01000081.1	Protein Homology	CDS	17994	18566	.	-	0	ID=cds-TMQ38625.1;Parent=gene-AO052_06055;Dbxref=NCBI_GP:TMQ38625.1;Name=TMQ38625.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD0.1;locus_tag=AO052_06055;product=Holliday junction resolvase;protein_id=TMQ38625.1;transl_table=11
LNKO01000081.1	Genbank	gene	18613	19353	.	-	.	ID=gene-AO052_06060;Name=AO052_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06060
LNKO01000081.1	Protein Homology	CDS	18613	19353	.	-	0	ID=cds-TMQ38626.1;Parent=gene-AO052_06060;Dbxref=NCBI_GP:TMQ38626.1;Name=TMQ38626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630070.1;locus_tag=AO052_06060;product=hypothetical protein;protein_id=TMQ38626.1;transl_table=11
LNKO01000081.1	Genbank	gene	19513	19989	.	-	.	ID=gene-AO052_06065;Name=AO052_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06065
LNKO01000081.1	Protein Homology	CDS	19513	19989	.	-	0	ID=cds-TMQ38627.1;Parent=gene-AO052_06065;Dbxref=NCBI_GP:TMQ38627.1;Name=TMQ38627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656312.1;locus_tag=AO052_06065;product=NUDIX pyrophosphatase;protein_id=TMQ38627.1;transl_table=11
LNKO01000081.1	Genbank	pseudogene	20011	21038	.	-	.	ID=gene-AO052_06070;Name=AO052_06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06070;pseudo=true
LNKO01000081.1	Protein Homology	CDS	20011	21038	.	-	2	ID=cds-AO052_06070;Parent=gene-AO052_06070;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696691.1;locus_tag=AO052_06070;pseudo=true;transl_table=11
##sequence-region LNKO01000082.1 1 13107
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000082.1	Genbank	region	1	13107	.	+	.	ID=LNKO01000082.1:1..13107;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000082.1	Genbank	pseudogene	1	734	.	-	.	ID=gene-AO052_06075;Name=AO052_06075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06075;pseudo=true
LNKO01000082.1	Protein Homology	CDS	1	734	.	-	0	ID=cds-AO052_06075;Parent=gene-AO052_06075;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688987.1;locus_tag=AO052_06075;pseudo=true;transl_table=11
LNKO01000082.1	Genbank	gene	953	1471	.	+	.	ID=gene-AO052_06080;Name=AO052_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06080
LNKO01000082.1	Protein Homology	CDS	953	1471	.	+	0	ID=cds-TMQ38526.1;Parent=gene-AO052_06080;Dbxref=NCBI_GP:TMQ38526.1;Name=TMQ38526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656314.1;locus_tag=AO052_06080;product=hypothetical protein;protein_id=TMQ38526.1;transl_table=11
LNKO01000082.1	Genbank	gene	1524	2249	.	+	.	ID=gene-AO052_06085;Name=AO052_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06085
LNKO01000082.1	Protein Homology	CDS	1524	2249	.	+	0	ID=cds-TMQ38527.1;Parent=gene-AO052_06085;Dbxref=NCBI_GP:TMQ38527.1;Name=TMQ38527.1;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD5.1;locus_tag=AO052_06085;product=tRNA (cmo5U34)-methyltransferase;protein_id=TMQ38527.1;transl_table=11
LNKO01000082.1	Genbank	gene	2323	2730	.	+	.	ID=gene-AO052_06090;Name=AO052_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06090
LNKO01000082.1	Protein Homology	CDS	2323	2730	.	+	0	ID=cds-TMQ38528.1;Parent=gene-AO052_06090;Dbxref=NCBI_GP:TMQ38528.1;Name=TMQ38528.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996164.1;locus_tag=AO052_06090;product=glyoxalase I;protein_id=TMQ38528.1;transl_table=11
LNKO01000082.1	Genbank	gene	2804	3493	.	+	.	ID=gene-AO052_06095;Name=AO052_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06095
LNKO01000082.1	Protein Homology	CDS	2804	3493	.	+	0	ID=cds-TMQ38529.1;Parent=gene-AO052_06095;Dbxref=NCBI_GP:TMQ38529.1;Name=TMQ38529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691801.1;locus_tag=AO052_06095;product=ribonuclease T;protein_id=TMQ38529.1;transl_table=11
LNKO01000082.1	Genbank	gene	3807	5159	.	+	.	ID=gene-AO052_06100;Name=AO052_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06100
LNKO01000082.1	Protein Homology	CDS	3807	5159	.	+	0	ID=cds-TMQ38530.1;Parent=gene-AO052_06100;Dbxref=NCBI_GP:TMQ38530.1;Name=TMQ38530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649062.1;locus_tag=AO052_06100;product=sodium:proton antiporter;protein_id=TMQ38530.1;transl_table=11
LNKO01000082.1	Genbank	gene	5192	5782	.	+	.	ID=gene-AO052_06105;Name=AO052_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06105
LNKO01000082.1	Protein Homology	CDS	5192	5782	.	+	0	ID=cds-TMQ38531.1;Parent=gene-AO052_06105;Dbxref=NCBI_GP:TMQ38531.1;Name=TMQ38531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525547.1;locus_tag=AO052_06105;product=ribonuclease T;protein_id=TMQ38531.1;transl_table=11
LNKO01000082.1	Genbank	gene	5834	5923	.	-	.	ID=gene-AO052_06110;Name=AO052_06110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_06110
LNKO01000082.1	tRNAscan-SE	tRNA	5834	5923	.	-	.	ID=rna-AO052_06110;Parent=gene-AO052_06110;anticodon=(pos:complement(5887..5889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_06110;product=tRNA-Ser
LNKO01000082.1	tRNAscan-SE	exon	5834	5923	.	-	.	ID=exon-AO052_06110-1;Parent=rna-AO052_06110;anticodon=(pos:complement(5887..5889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_06110;product=tRNA-Ser
LNKO01000082.1	Genbank	gene	6138	6704	.	-	.	ID=gene-AO052_06115;Name=AO052_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06115
LNKO01000082.1	Protein Homology	CDS	6138	6704	.	-	0	ID=cds-TMQ38532.1;Parent=gene-AO052_06115;Dbxref=NCBI_GP:TMQ38532.1;Name=TMQ38532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=AO052_06115;product=elongation factor P;protein_id=TMQ38532.1;transl_table=11
LNKO01000082.1	Genbank	gene	6742	7758	.	+	.	ID=gene-AO052_06120;Name=AO052_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06120
LNKO01000082.1	Protein Homology	CDS	6742	7758	.	+	0	ID=cds-TMQ38533.1;Parent=gene-AO052_06120;Dbxref=NCBI_GP:TMQ38533.1;Name=TMQ38533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525548.1;locus_tag=AO052_06120;product=EF-P beta-lysylation protein EpmB;protein_id=TMQ38533.1;transl_table=11
LNKO01000082.1	Genbank	gene	7866	9158	.	+	.	ID=gene-AO052_06125;Name=AO052_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06125
LNKO01000082.1	Protein Homology	CDS	7866	9158	.	+	0	ID=cds-TMQ38534.1;Parent=gene-AO052_06125;Dbxref=NCBI_GP:TMQ38534.1;Name=TMQ38534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44415.1;locus_tag=AO052_06125;product=Opacity-associated protein OapA;protein_id=TMQ38534.1;transl_table=11
LNKO01000082.1	Genbank	gene	9217	9621	.	+	.	ID=gene-AO052_06130;Name=AO052_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06130
LNKO01000082.1	Protein Homology	CDS	9217	9621	.	+	0	ID=cds-TMQ38535.1;Parent=gene-AO052_06130;Dbxref=NCBI_GP:TMQ38535.1;Name=TMQ38535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701577.1;locus_tag=AO052_06130;product=Opacity-associated protein OapB;protein_id=TMQ38535.1;transl_table=11
LNKO01000082.1	Genbank	gene	9624	10334	.	+	.	ID=gene-AO052_06135;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AO052_06135
LNKO01000082.1	Protein Homology	CDS	9624	10334	.	+	0	ID=cds-TMQ38536.1;Parent=gene-AO052_06135;Dbxref=NCBI_GP:TMQ38536.1;Name=TMQ38536.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527492.1;locus_tag=AO052_06135;product=DNA repair protein RecO;protein_id=TMQ38536.1;transl_table=11
LNKO01000082.1	Genbank	gene	10475	11098	.	+	.	ID=gene-AO052_06140;Name=AO052_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06140
LNKO01000082.1	Protein Homology	CDS	10475	11098	.	+	0	ID=cds-TMQ38537.1;Parent=gene-AO052_06140;Dbxref=NCBI_GP:TMQ38537.1;Name=TMQ38537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525552.1;locus_tag=AO052_06140;product=fimbrial protein;protein_id=TMQ38537.1;transl_table=11
LNKO01000082.1	Genbank	gene	11193	11888	.	+	.	ID=gene-AO052_06145;Name=AO052_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06145
LNKO01000082.1	Protein Homology	CDS	11193	11888	.	+	0	ID=cds-TMQ38538.1;Parent=gene-AO052_06145;Dbxref=NCBI_GP:TMQ38538.1;Name=TMQ38538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525553.1;locus_tag=AO052_06145;product=molecular chaperone;protein_id=TMQ38538.1;transl_table=11
LNKO01000082.1	Genbank	pseudogene	11922	13107	.	+	.	ID=gene-AO052_06150;Name=AO052_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06150;pseudo=true
LNKO01000082.1	Protein Homology	CDS	11922	13107	.	+	0	ID=cds-AO052_06150;Parent=gene-AO052_06150;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525554.1;locus_tag=AO052_06150;pseudo=true;transl_table=11
##sequence-region LNKO01000083.1 1 6474
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000083.1	Genbank	region	1	6474	.	+	.	ID=LNKO01000083.1:1..6474;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000083.1	Genbank	pseudogene	1	1333	.	+	.	ID=gene-AO052_06155;Name=AO052_06155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06155;pseudo=true
LNKO01000083.1	Protein Homology	CDS	1	1333	.	+	1	ID=cds-AO052_06155;Parent=gene-AO052_06155;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525554.1;locus_tag=AO052_06155;pseudo=true;transl_table=11
LNKO01000083.1	Genbank	gene	1337	2455	.	+	.	ID=gene-AO052_06160;Name=AO052_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06160
LNKO01000083.1	Protein Homology	CDS	1337	2455	.	+	0	ID=cds-TMQ38501.1;Parent=gene-AO052_06160;Dbxref=NCBI_GP:TMQ38501.1;Name=TMQ38501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996155.1;locus_tag=AO052_06160;product=fimbrial protein;protein_id=TMQ38501.1;transl_table=11
LNKO01000083.1	Genbank	gene	2600	2869	.	-	.	ID=gene-AO052_06165;Name=AO052_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06165
LNKO01000083.1	Protein Homology	CDS	2600	2869	.	-	0	ID=cds-TMQ38502.1;Parent=gene-AO052_06165;Dbxref=NCBI_GP:TMQ38502.1;Name=TMQ38502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525556.1;locus_tag=AO052_06165;product=antitoxin;protein_id=TMQ38502.1;transl_table=11
LNKO01000083.1	Genbank	gene	3007	4323	.	+	.	ID=gene-AO052_06170;Name=AO052_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06170
LNKO01000083.1	Protein Homology	CDS	3007	4323	.	+	0	ID=cds-TMQ38503.1;Parent=gene-AO052_06170;Dbxref=NCBI_GP:TMQ38503.1;Name=TMQ38503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996152.1;locus_tag=AO052_06170;product=23S rRNA methyltransferase;protein_id=TMQ38503.1;transl_table=11
LNKO01000083.1	Genbank	gene	4401	6474	.	+	.	ID=gene-AO052_06175;Name=relA;end_range=6474,.;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AO052_06175;partial=true
LNKO01000083.1	Protein Homology	CDS	4401	6474	.	+	0	ID=cds-TMQ38504.1;Parent=gene-AO052_06175;Dbxref=NCBI_GP:TMQ38504.1;Name=TMQ38504.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;end_range=6474,.;gbkey=CDS;gene=relA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550463.1;locus_tag=AO052_06175;partial=true;product=(p)ppGpp synthetase;protein_id=TMQ38504.1;transl_table=11
##sequence-region LNKO01000084.1 1 21966
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000084.1	Genbank	region	1	21966	.	+	.	ID=LNKO01000084.1:1..21966;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000084.1	Genbank	gene	169	525	.	+	.	ID=gene-AO052_06180;Name=AO052_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06180
LNKO01000084.1	Protein Homology	CDS	169	525	.	+	0	ID=cds-TMQ38464.1;Parent=gene-AO052_06180;Dbxref=NCBI_GP:TMQ38464.1;Name=TMQ38464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44424.1;locus_tag=AO052_06180;product=diacylglycerol kinase;protein_id=TMQ38464.1;transl_table=11
LNKO01000084.1	Genbank	gene	608	1201	.	+	.	ID=gene-AO052_06185;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=AO052_06185
LNKO01000084.1	Protein Homology	CDS	608	1201	.	+	0	ID=cds-TMQ38465.1;Parent=gene-AO052_06185;Dbxref=NCBI_GP:TMQ38465.1;Name=TMQ38465.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44645.1;locus_tag=AO052_06185;product=molybdenum cofactor biosynthesis protein;protein_id=TMQ38465.1;transl_table=11
LNKO01000084.1	Genbank	gene	1203	1541	.	+	.	ID=gene-AO052_06190;Name=AO052_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06190
LNKO01000084.1	Protein Homology	CDS	1203	1541	.	+	0	ID=cds-TMQ38466.1;Parent=gene-AO052_06190;Dbxref=NCBI_GP:TMQ38466.1;Name=TMQ38466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635169.1;locus_tag=AO052_06190;product=transcriptional regulator;protein_id=TMQ38466.1;transl_table=11
LNKO01000084.1	Genbank	gene	1541	2587	.	+	.	ID=gene-AO052_06195;Name=AO052_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06195
LNKO01000084.1	Protein Homology	CDS	1541	2587	.	+	0	ID=cds-TMQ38467.1;Parent=gene-AO052_06195;Dbxref=NCBI_GP:TMQ38467.1;Name=TMQ38467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500912.1;locus_tag=AO052_06195;product=hypothetical protein;protein_id=TMQ38467.1;transl_table=11
LNKO01000084.1	Genbank	gene	2629	4821	.	-	.	ID=gene-AO052_06200;Name=AO052_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06200
LNKO01000084.1	Protein Homology	CDS	2629	4821	.	-	0	ID=cds-TMQ38468.1;Parent=gene-AO052_06200;Dbxref=NCBI_GP:TMQ38468.1;Name=TMQ38468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701582.1;locus_tag=AO052_06200;product=primosomal protein N';protein_id=TMQ38468.1;transl_table=11
LNKO01000084.1	Genbank	gene	4905	5645	.	+	.	ID=gene-AO052_06205;Name=AO052_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06205
LNKO01000084.1	Protein Homology	CDS	4905	5645	.	+	0	ID=cds-TMQ38469.1;Parent=gene-AO052_06205;Dbxref=NCBI_GP:TMQ38469.1;Name=TMQ38469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662679.1;locus_tag=AO052_06205;product=tRNA (guanine-N7)-methyltransferase;protein_id=TMQ38469.1;transl_table=11
LNKO01000084.1	Protein Homology	pseudogene	5730	6074	.	+	.	ID=gene-AO052_06210;Name=AO052_06210;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06210;pseudo=true
LNKO01000084.1	Genbank	gene	6280	6810	.	+	.	ID=gene-AO052_06215;Name=AO052_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06215
LNKO01000084.1	Protein Homology	CDS	6280	6810	.	+	0	ID=cds-TMQ38470.1;Parent=gene-AO052_06215;Dbxref=NCBI_GP:TMQ38470.1;Name=TMQ38470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654038.1;locus_tag=AO052_06215;product=ferredoxin-type protein NapF;protein_id=TMQ38470.1;transl_table=11
LNKO01000084.1	Genbank	gene	6803	7084	.	+	.	ID=gene-AO052_06220;Name=AO052_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06220
LNKO01000084.1	Protein Homology	CDS	6803	7084	.	+	0	ID=cds-TMQ38471.1;Parent=gene-AO052_06220;Dbxref=NCBI_GP:TMQ38471.1;Name=TMQ38471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656333.1;locus_tag=AO052_06220;product=nitrate reductase;protein_id=TMQ38471.1;transl_table=11
LNKO01000084.1	Genbank	gene	7121	9604	.	+	.	ID=gene-AO052_06225;Name=AO052_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06225
LNKO01000084.1	Protein Homology	CDS	7121	9604	.	+	0	ID=cds-TMQ38472.1;Parent=gene-AO052_06225;Dbxref=NCBI_GP:TMQ38472.1;Name=TMQ38472.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694329.1;locus_tag=AO052_06225;product=nitrate reductase;protein_id=TMQ38472.1;transl_table=11
LNKO01000084.1	Genbank	gene	9658	10497	.	+	.	ID=gene-AO052_06230;Name=AO052_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06230
LNKO01000084.1	Protein Homology	CDS	9658	10497	.	+	0	ID=cds-TMQ38473.1;Parent=gene-AO052_06230;Dbxref=NCBI_GP:TMQ38473.1;Name=TMQ38473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654033.1;locus_tag=AO052_06230;product=quinol dehydrogenase;protein_id=TMQ38473.1;transl_table=11
LNKO01000084.1	Genbank	gene	10497	11360	.	+	.	ID=gene-AO052_06235;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AO052_06235
LNKO01000084.1	Protein Homology	CDS	10497	11360	.	+	0	ID=cds-TMQ38474.1;Parent=gene-AO052_06235;Dbxref=NCBI_GP:TMQ38474.1;Name=TMQ38474.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627025.1;locus_tag=AO052_06235;product=quinol dehydrogenase;protein_id=TMQ38474.1;transl_table=11
LNKO01000084.1	Genbank	gene	11366	11809	.	+	.	ID=gene-AO052_06240;Name=AO052_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06240
LNKO01000084.1	Protein Homology	CDS	11366	11809	.	+	0	ID=cds-TMQ38475.1;Parent=gene-AO052_06240;Dbxref=NCBI_GP:TMQ38475.1;Name=TMQ38475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44654.1;locus_tag=AO052_06240;product=diacylglycerol kinase;protein_id=TMQ38475.1;transl_table=11
LNKO01000084.1	Genbank	gene	11824	12426	.	+	.	ID=gene-AO052_06245;Name=AO052_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06245
LNKO01000084.1	Protein Homology	CDS	11824	12426	.	+	0	ID=cds-TMQ38476.1;Parent=gene-AO052_06245;Dbxref=NCBI_GP:TMQ38476.1;Name=TMQ38476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996144.1;locus_tag=AO052_06245;product=cytochrome C;protein_id=TMQ38476.1;transl_table=11
LNKO01000084.1	Genbank	gene	12586	13230	.	-	.	ID=gene-AO052_06250;Name=AO052_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06250
LNKO01000084.1	Protein Homology	CDS	12586	13230	.	-	0	ID=cds-TMQ38477.1;Parent=gene-AO052_06250;Dbxref=NCBI_GP:TMQ38477.1;Name=TMQ38477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760097.1;locus_tag=AO052_06250;product=adenylate kinase;protein_id=TMQ38477.1;transl_table=11
LNKO01000084.1	Genbank	gene	13315	14553	.	-	.	ID=gene-AO052_06255;Name=AO052_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06255
LNKO01000084.1	Protein Homology	CDS	13315	14553	.	-	0	ID=cds-TMQ38478.1;Parent=gene-AO052_06255;Dbxref=NCBI_GP:TMQ38478.1;Name=TMQ38478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525564.1;locus_tag=AO052_06255;product=AmpG family muropeptide MFS transporter;protein_id=TMQ38478.1;transl_table=11
LNKO01000084.1	Genbank	gene	14734	15750	.	-	.	ID=gene-AO052_06260;Name=AO052_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06260
LNKO01000084.1	Protein Homology	CDS	14734	15750	.	-	0	ID=cds-TMQ38479.1;Parent=gene-AO052_06260;Dbxref=NCBI_GP:TMQ38479.1;Name=TMQ38479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P24325.2;locus_tag=AO052_06260;product=UDP-glucose 4-epimerase;protein_id=TMQ38479.1;transl_table=11
LNKO01000084.1	Genbank	gene	15923	16873	.	-	.	ID=gene-AO052_06265;Name=AO052_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06265
LNKO01000084.1	Protein Homology	CDS	15923	16873	.	-	0	ID=cds-TMQ38480.1;Parent=gene-AO052_06265;Dbxref=NCBI_GP:TMQ38480.1;Name=TMQ38480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996141.1;locus_tag=AO052_06265;product=CMP-Neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase;protein_id=TMQ38480.1;transl_table=11
LNKO01000084.1	Genbank	gene	17286	18008	.	+	.	ID=gene-AO052_06270;Name=AO052_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06270
LNKO01000084.1	Protein Homology	CDS	17286	18008	.	+	0	ID=cds-TMQ38481.1;Parent=gene-AO052_06270;Dbxref=NCBI_GP:TMQ38481.1;Name=TMQ38481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996140.1;locus_tag=AO052_06270;product=phosphonate ABC transporter ATP-binding protein;protein_id=TMQ38481.1;transl_table=11
LNKO01000084.1	Genbank	gene	18005	18742	.	+	.	ID=gene-AO052_06275;Name=AO052_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06275
LNKO01000084.1	Protein Homology	CDS	18005	18742	.	+	0	ID=cds-TMQ38482.1;Parent=gene-AO052_06275;Dbxref=NCBI_GP:TMQ38482.1;Name=TMQ38482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708452.1;locus_tag=AO052_06275;product=ABC transporter permease;protein_id=TMQ38482.1;transl_table=11
LNKO01000084.1	Genbank	gene	18764	19708	.	+	.	ID=gene-AO052_06280;Name=AO052_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06280
LNKO01000084.1	Protein Homology	CDS	18764	19708	.	+	0	ID=cds-TMQ38483.1;Parent=gene-AO052_06280;Dbxref=NCBI_GP:TMQ38483.1;Name=TMQ38483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996139.1;locus_tag=AO052_06280;product=thiamine biosynthesis protein;protein_id=TMQ38483.1;transl_table=11
LNKO01000084.1	Genbank	gene	19719	20366	.	+	.	ID=gene-AO052_06285;Name=AO052_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06285
LNKO01000084.1	Protein Homology	CDS	19719	20366	.	+	0	ID=cds-TMQ38484.1;Parent=gene-AO052_06285;Dbxref=NCBI_GP:TMQ38484.1;Name=TMQ38484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996138.1;locus_tag=AO052_06285;product=thiaminase II;protein_id=TMQ38484.1;transl_table=11
LNKO01000084.1	Genbank	gene	20460	21275	.	-	.	ID=gene-AO052_06290;Name=AO052_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06290
LNKO01000084.1	Protein Homology	CDS	20460	21275	.	-	0	ID=cds-TMQ38485.1;Parent=gene-AO052_06290;Dbxref=NCBI_GP:TMQ38485.1;Name=TMQ38485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44660.1;locus_tag=AO052_06290;product=iron ABC transporter permease;protein_id=TMQ38485.1;transl_table=11
LNKO01000084.1	Genbank	gene	21268	21966	.	-	.	ID=gene-AO052_06295;Name=AO052_06295;end_range=21966,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06295;partial=true
LNKO01000084.1	Protein Homology	CDS	21268	21966	.	-	0	ID=cds-TMQ38486.1;Parent=gene-AO052_06295;Dbxref=NCBI_GP:TMQ38486.1;Name=TMQ38486.1;end_range=21966,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996136.1;locus_tag=AO052_06295;partial=true;product=hypothetical protein;protein_id=TMQ38486.1;transl_table=11
##sequence-region LNKO01000085.1 1 7593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000085.1	Genbank	region	1	7593	.	+	.	ID=LNKO01000085.1:1..7593;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000085.1	Genbank	pseudogene	1	150	.	-	.	ID=gene-AO052_06300;Name=AO052_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06300;pseudo=true
LNKO01000085.1	Protein Homology	CDS	1	150	.	-	0	ID=cds-AO052_06300;Parent=gene-AO052_06300;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44661.1;locus_tag=AO052_06300;pseudo=true;transl_table=11
LNKO01000085.1	Genbank	gene	154	1074	.	-	.	ID=gene-AO052_06305;Name=AO052_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06305
LNKO01000085.1	Protein Homology	CDS	154	1074	.	-	0	ID=cds-TMQ38426.1;Parent=gene-AO052_06305;Dbxref=NCBI_GP:TMQ38426.1;Name=TMQ38426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701595.1;locus_tag=AO052_06305;product=iron ABC transporter permease;protein_id=TMQ38426.1;transl_table=11
LNKO01000085.1	Genbank	gene	1074	1955	.	-	.	ID=gene-AO052_06310;Name=AO052_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06310
LNKO01000085.1	Protein Homology	CDS	1074	1955	.	-	0	ID=cds-TMQ38427.1;Parent=gene-AO052_06310;Dbxref=NCBI_GP:TMQ38427.1;Name=TMQ38427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701596.1;locus_tag=AO052_06310;product=iron-binding protein;protein_id=TMQ38427.1;transl_table=11
LNKO01000085.1	Genbank	gene	2316	3194	.	-	.	ID=gene-AO052_06315;Name=AO052_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06315
LNKO01000085.1	Protein Homology	CDS	2316	3194	.	-	0	ID=cds-TMQ38428.1;Parent=gene-AO052_06315;Dbxref=NCBI_GP:TMQ38428.1;Name=TMQ38428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649130.1;locus_tag=AO052_06315;product=D-alanyl-D-alanine endopeptidase;protein_id=TMQ38428.1;transl_table=11
LNKO01000085.1	Genbank	gene	3441	4592	.	+	.	ID=gene-AO052_06320;Name=AO052_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06320
LNKO01000085.1	Protein Homology	CDS	3441	4592	.	+	0	ID=cds-TMQ38429.1;Parent=gene-AO052_06320;Dbxref=NCBI_GP:TMQ38429.1;Name=TMQ38429.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634086.1;locus_tag=AO052_06320;product=23S rRNA (adenine(2503)-C2)-methyltransferase;protein_id=TMQ38429.1;transl_table=11
LNKO01000085.1	Genbank	gene	4693	5232	.	+	.	ID=gene-AO052_06325;Name=AO052_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06325
LNKO01000085.1	Protein Homology	CDS	4693	5232	.	+	0	ID=cds-TMQ38430.1;Parent=gene-AO052_06325;Dbxref=NCBI_GP:TMQ38430.1;Name=TMQ38430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43988.1;locus_tag=AO052_06325;product=type IV pilus biogenesis/stability protein PilW;protein_id=TMQ38430.1;transl_table=11
LNKO01000085.1	Genbank	gene	5304	6215	.	+	.	ID=gene-AO052_06330;Name=AO052_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06330
LNKO01000085.1	Protein Homology	CDS	5304	6215	.	+	0	ID=cds-TMQ38431.1;Parent=gene-AO052_06330;Dbxref=NCBI_GP:TMQ38431.1;Name=TMQ38431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57065.1;locus_tag=AO052_06330;product=hypothetical protein;protein_id=TMQ38431.1;transl_table=11
LNKO01000085.1	Genbank	gene	6224	7330	.	+	.	ID=gene-AO052_06335;Name=AO052_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06335
LNKO01000085.1	Protein Homology	CDS	6224	7330	.	+	0	ID=cds-TMQ38432.1;Parent=gene-AO052_06335;Dbxref=NCBI_GP:TMQ38432.1;Name=TMQ38432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666608.1;locus_tag=AO052_06335;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=TMQ38432.1;transl_table=11
LNKO01000085.1	Genbank	pseudogene	7340	7593	.	+	.	ID=gene-AO052_06340;Name=AO052_06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06340;pseudo=true
LNKO01000085.1	Protein Homology	CDS	7340	7593	.	+	0	ID=cds-AO052_06340;Parent=gene-AO052_06340;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43823.2;locus_tag=AO052_06340;pseudo=true;transl_table=11
##sequence-region LNKO01000086.1 1 10743
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000086.1	Genbank	region	1	10743	.	+	.	ID=LNKO01000086.1:1..10743;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000086.1	Genbank	gene	1	1016	.	+	.	ID=gene-AO052_06345;Name=AO052_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06345;partial=true;start_range=.,1
LNKO01000086.1	Protein Homology	CDS	1	1016	.	+	2	ID=cds-TMQ38391.1;Parent=gene-AO052_06345;Dbxref=NCBI_GP:TMQ38391.1;Name=TMQ38391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43823.2;locus_tag=AO052_06345;partial=true;product=histidyl-tRNA synthetase;protein_id=TMQ38391.1;start_range=.,1;transl_table=11
LNKO01000086.1	Genbank	gene	1034	1648	.	+	.	ID=gene-AO052_06350;Name=AO052_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06350
LNKO01000086.1	Protein Homology	CDS	1034	1648	.	+	0	ID=cds-TMQ38392.1;Parent=gene-AO052_06350;Dbxref=NCBI_GP:TMQ38392.1;Name=TMQ38392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43989.1;locus_tag=AO052_06350;product=hypothetical protein;protein_id=TMQ38392.1;transl_table=11
LNKO01000086.1	Genbank	gene	1699	1893	.	-	.	ID=gene-AO052_06355;Name=AO052_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06355
LNKO01000086.1	Protein Homology	CDS	1699	1893	.	-	0	ID=cds-TMQ38393.1;Parent=gene-AO052_06355;Dbxref=NCBI_GP:TMQ38393.1;Name=TMQ38393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44668.1;locus_tag=AO052_06355;product=Fe-S assembly protein IscX;protein_id=TMQ38393.1;transl_table=11
LNKO01000086.1	Genbank	gene	1893	2234	.	-	.	ID=gene-AO052_06360;Name=AO052_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06360
LNKO01000086.1	Protein Homology	CDS	1893	2234	.	-	0	ID=cds-TMQ38394.1;Parent=gene-AO052_06360;Dbxref=NCBI_GP:TMQ38394.1;Name=TMQ38394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005623313.1;locus_tag=AO052_06360;product=2Fe-2S ferredoxin;protein_id=TMQ38394.1;transl_table=11
LNKO01000086.1	Genbank	gene	2274	4133	.	-	.	ID=gene-AO052_06365;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AO052_06365
LNKO01000086.1	Protein Homology	CDS	2274	4133	.	-	0	ID=cds-TMQ38395.1;Parent=gene-AO052_06365;Dbxref=NCBI_GP:TMQ38395.1;Name=TMQ38395.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701602.1;locus_tag=AO052_06365;product=molecular chaperone HscA;protein_id=TMQ38395.1;transl_table=11
LNKO01000086.1	Genbank	gene	4152	4838	.	-	.	ID=gene-AO052_06370;Name=AO052_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06370
LNKO01000086.1	Protein Homology	CDS	4152	4838	.	-	0	ID=cds-TMQ38396.1;Parent=gene-AO052_06370;Dbxref=NCBI_GP:TMQ38396.1;Name=TMQ38396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659899.1;locus_tag=AO052_06370;product=hypothetical protein;protein_id=TMQ38396.1;transl_table=11
LNKO01000086.1	Genbank	gene	4889	5413	.	-	.	ID=gene-AO052_06375;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AO052_06375
LNKO01000086.1	Protein Homology	CDS	4889	5413	.	-	0	ID=cds-TMQ38397.1;Parent=gene-AO052_06375;Dbxref=NCBI_GP:TMQ38397.1;Name=TMQ38397.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996126.1;locus_tag=AO052_06375;product=co-chaperone HscB;protein_id=TMQ38397.1;transl_table=11
LNKO01000086.1	Genbank	gene	5426	5749	.	-	.	ID=gene-AO052_06380;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AO052_06380
LNKO01000086.1	Protein Homology	CDS	5426	5749	.	-	0	ID=cds-TMQ38398.1;Parent=gene-AO052_06380;Dbxref=NCBI_GP:TMQ38398.1;Name=TMQ38398.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527473.1;locus_tag=AO052_06380;product=iron-sulfur cluster assembly protein IscA;protein_id=TMQ38398.1;transl_table=11
LNKO01000086.1	Genbank	gene	5807	6187	.	-	.	ID=gene-AO052_06385;Name=AO052_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06385
LNKO01000086.1	Protein Homology	CDS	5807	6187	.	-	0	ID=cds-TMQ38399.1;Parent=gene-AO052_06385;Dbxref=NCBI_GP:TMQ38399.1;Name=TMQ38399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57074.2;locus_tag=AO052_06385;product=scaffolding protein;protein_id=TMQ38399.1;transl_table=11
LNKO01000086.1	Genbank	gene	6247	7461	.	-	.	ID=gene-AO052_06390;Name=AO052_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06390
LNKO01000086.1	Protein Homology	CDS	6247	7461	.	-	0	ID=cds-TMQ38400.1;Parent=gene-AO052_06390;Dbxref=NCBI_GP:TMQ38400.1;Name=TMQ38400.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272013.1;locus_tag=AO052_06390;product=cysteine desulfurase;protein_id=TMQ38400.1;transl_table=11
LNKO01000086.1	Genbank	gene	7529	7981	.	-	.	ID=gene-AO052_06395;Name=AO052_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06395
LNKO01000086.1	Protein Homology	CDS	7529	7981	.	-	0	ID=cds-TMQ38401.1;Parent=gene-AO052_06395;Dbxref=NCBI_GP:TMQ38401.1;Name=TMQ38401.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525578.1;locus_tag=AO052_06395;product=transcriptional regulator;protein_id=TMQ38401.1;transl_table=11
LNKO01000086.1	Genbank	gene	8034	8759	.	-	.	ID=gene-AO052_06400;Name=AO052_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06400
LNKO01000086.1	Protein Homology	CDS	8034	8759	.	-	0	ID=cds-TMQ38402.1;Parent=gene-AO052_06400;Dbxref=NCBI_GP:TMQ38402.1;Name=TMQ38402.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44676.2;locus_tag=AO052_06400;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase;protein_id=TMQ38402.1;transl_table=11
LNKO01000086.1	Genbank	gene	9407	9865	.	-	.	ID=gene-AO052_06405;Name=AO052_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06405
LNKO01000086.1	Protein Homology	CDS	9407	9865	.	-	0	ID=cds-TMQ38403.1;Parent=gene-AO052_06405;Dbxref=NCBI_GP:TMQ38403.1;Name=TMQ38403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525579.1;locus_tag=AO052_06405;product=enoyl-CoA hydratase;protein_id=TMQ38403.1;transl_table=11
LNKO01000086.1	Genbank	gene	9862	10464	.	-	.	ID=gene-AO052_06410;Name=AO052_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06410
LNKO01000086.1	Protein Homology	CDS	9862	10464	.	-	0	ID=cds-TMQ38404.1;Parent=gene-AO052_06410;Dbxref=NCBI_GP:TMQ38404.1;Name=TMQ38404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525580.1;locus_tag=AO052_06410;product=hypothetical protein;protein_id=TMQ38404.1;transl_table=11
LNKO01000086.1	Genbank	gene	10476	10743	.	-	.	ID=gene-AO052_06415;Name=AO052_06415;end_range=10743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06415;partial=true
LNKO01000086.1	GeneMarkS+	CDS	10476	10743	.	-	1	ID=cds-TMQ38405.1;Parent=gene-AO052_06415;Dbxref=NCBI_GP:TMQ38405.1;Name=TMQ38405.1;end_range=10743,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_06415;partial=true;product=hypothetical protein;protein_id=TMQ38405.1;transl_table=11
##sequence-region LNKO01000087.1 1 11040
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000087.1	Genbank	region	1	11040	.	+	.	ID=LNKO01000087.1:1..11040;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000087.1	Genbank	gene	1	102	.	+	.	ID=gene-AO052_06420;Name=AO052_06420;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO052_06420;partial=true;start_range=.,1
LNKO01000087.1	cmsearch	rRNA	1	102	.	+	.	ID=rna-AO052_06420;Parent=gene-AO052_06420;gbkey=rRNA;locus_tag=AO052_06420;partial=true;product=5S ribosomal RNA;start_range=.,1
LNKO01000087.1	cmsearch	exon	1	102	.	+	.	ID=exon-AO052_06420-1;Parent=rna-AO052_06420;gbkey=rRNA;locus_tag=AO052_06420;partial=true;product=5S ribosomal RNA;start_range=.,1
LNKO01000087.1	Genbank	gene	826	3063	.	-	.	ID=gene-AO052_06425;Name=AO052_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06425
LNKO01000087.1	Protein Homology	CDS	826	3063	.	-	0	ID=cds-TMQ38358.1;Parent=gene-AO052_06425;Dbxref=NCBI_GP:TMQ38358.1;Name=TMQ38358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996340.1;locus_tag=AO052_06425;product=TonB-dependent receptor;protein_id=TMQ38358.1;transl_table=11
LNKO01000087.1	Genbank	gene	3116	3352	.	+	.	ID=gene-AO052_06430;Name=AO052_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06430
LNKO01000087.1	Protein Homology	CDS	3116	3352	.	+	0	ID=cds-TMQ38359.1;Parent=gene-AO052_06430;Dbxref=NCBI_GP:TMQ38359.1;Name=TMQ38359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664915.1;locus_tag=AO052_06430;product=hypothetical protein;protein_id=TMQ38359.1;transl_table=11
LNKO01000087.1	Protein Homology	pseudogene	3349	3505	.	+	.	ID=gene-AO052_06435;Name=AO052_06435;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06435;pseudo=true
LNKO01000087.1	Genbank	gene	3553	4182	.	-	.	ID=gene-AO052_06440;Name=AO052_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06440
LNKO01000087.1	Protein Homology	CDS	3553	4182	.	-	0	ID=cds-TMQ38360.1;Parent=gene-AO052_06440;Dbxref=NCBI_GP:TMQ38360.1;Name=TMQ38360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527874.1;locus_tag=AO052_06440;product=glutathione S-transferase;protein_id=TMQ38360.1;transl_table=11
LNKO01000087.1	Genbank	gene	4518	5807	.	-	.	ID=gene-AO052_06445;Name=AO052_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06445
LNKO01000087.1	Protein Homology	CDS	4518	5807	.	-	0	ID=cds-TMQ38361.1;Parent=gene-AO052_06445;Dbxref=NCBI_GP:TMQ38361.1;Name=TMQ38361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635412.1;locus_tag=AO052_06445;product=serine--tRNA ligase;protein_id=TMQ38361.1;transl_table=11
LNKO01000087.1	Genbank	gene	6162	6503	.	+	.	ID=gene-AO052_06450;Name=AO052_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06450
LNKO01000087.1	Protein Homology	CDS	6162	6503	.	+	0	ID=cds-TMQ38362.1;Parent=gene-AO052_06450;Dbxref=NCBI_GP:TMQ38362.1;Name=TMQ38362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996344.1;locus_tag=AO052_06450;product=hypothetical protein;protein_id=TMQ38362.1;transl_table=11
LNKO01000087.1	Genbank	gene	6593	7072	.	-	.	ID=gene-AO052_06455;Name=AO052_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06455
LNKO01000087.1	Protein Homology	CDS	6593	7072	.	-	0	ID=cds-TMQ38363.1;Parent=gene-AO052_06455;Dbxref=NCBI_GP:TMQ38363.1;Name=TMQ38363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271885.1;locus_tag=AO052_06455;product=hypothetical protein;protein_id=TMQ38363.1;transl_table=11
LNKO01000087.1	Genbank	gene	7074	7844	.	-	.	ID=gene-AO052_06460;Name=AO052_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06460
LNKO01000087.1	Protein Homology	CDS	7074	7844	.	-	0	ID=cds-TMQ38364.1;Parent=gene-AO052_06460;Dbxref=NCBI_GP:TMQ38364.1;Name=TMQ38364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704932.1;locus_tag=AO052_06460;product=hypothetical protein;protein_id=TMQ38364.1;transl_table=11
LNKO01000087.1	Genbank	gene	7973	9235	.	-	.	ID=gene-AO052_06465;Name=AO052_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06465
LNKO01000087.1	Protein Homology	CDS	7973	9235	.	-	0	ID=cds-TMQ38365.1;Parent=gene-AO052_06465;Dbxref=NCBI_GP:TMQ38365.1;Name=TMQ38365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57017.2;locus_tag=AO052_06465;product=magnesium/cobalt efflux protein;protein_id=TMQ38365.1;transl_table=11
LNKO01000087.1	Genbank	gene	9516	10895	.	+	.	ID=gene-AO052_06470;Name=AO052_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06470
LNKO01000087.1	Protein Homology	CDS	9516	10895	.	+	0	ID=cds-TMQ38366.1;Parent=gene-AO052_06470;Dbxref=NCBI_GP:TMQ38366.1;Name=TMQ38366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271882.1;locus_tag=AO052_06470;product=signal recognition particle;protein_id=TMQ38366.1;transl_table=11
##sequence-region LNKO01000088.1 1 35313
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000088.1	Genbank	region	1	35313	.	+	.	ID=LNKO01000088.1:1..35313;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000088.1	Genbank	gene	77	3103	.	-	.	ID=gene-AO052_06475;Name=AO052_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06475
LNKO01000088.1	Protein Homology	CDS	77	3103	.	-	0	ID=cds-TMQ38282.1;Parent=gene-AO052_06475;Dbxref=NCBI_GP:TMQ38282.1;Name=TMQ38282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271881.1;locus_tag=AO052_06475;product=DEAD/DEAH box helicase;protein_id=TMQ38282.1;transl_table=11
LNKO01000088.1	Genbank	gene	3203	4453	.	-	.	ID=gene-AO052_06480;Name=AO052_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06480
LNKO01000088.1	Protein Homology	CDS	3203	4453	.	-	0	ID=cds-TMQ38283.1;Parent=gene-AO052_06480;Dbxref=NCBI_GP:TMQ38283.1;Name=TMQ38283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690936.1;locus_tag=AO052_06480;product=restriction endonuclease subunit S;protein_id=TMQ38283.1;transl_table=11
LNKO01000088.1	Genbank	gene	4625	6088	.	-	.	ID=gene-AO052_06485;Name=AO052_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06485
LNKO01000088.1	Protein Homology	CDS	4625	6088	.	-	0	ID=cds-TMQ38284.1;Parent=gene-AO052_06485;Dbxref=NCBI_GP:TMQ38284.1;Name=TMQ38284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649661.1;locus_tag=AO052_06485;product=ATPase;protein_id=TMQ38284.1;transl_table=11
LNKO01000088.1	Genbank	gene	6217	8589	.	-	.	ID=gene-AO052_06490;Name=AO052_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06490
LNKO01000088.1	Protein Homology	CDS	6217	8589	.	-	0	ID=cds-TMQ38285.1;Parent=gene-AO052_06490;Dbxref=NCBI_GP:TMQ38285.1;Name=TMQ38285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649662.1;locus_tag=AO052_06490;product=DNA methylase;protein_id=TMQ38285.1;transl_table=11
LNKO01000088.1	Genbank	gene	8765	9520	.	-	.	ID=gene-AO052_06495;Name=AO052_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06495
LNKO01000088.1	Protein Homology	CDS	8765	9520	.	-	0	ID=cds-TMQ38286.1;Parent=gene-AO052_06495;Dbxref=NCBI_GP:TMQ38286.1;Name=TMQ38286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630686.1;locus_tag=AO052_06495;product=metal-binding protein;protein_id=TMQ38286.1;transl_table=11
LNKO01000088.1	Genbank	gene	9836	11716	.	+	.	ID=gene-AO052_06500;Name=AO052_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06500
LNKO01000088.1	Protein Homology	CDS	9836	11716	.	+	0	ID=cds-TMQ38287.1;Parent=gene-AO052_06500;Dbxref=NCBI_GP:TMQ38287.1;Name=TMQ38287.1;Note=molecular chaperone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671989.1;locus_tag=AO052_06500;product=molecular chaperone HtpG;protein_id=TMQ38287.1;transl_table=11
LNKO01000088.1	Genbank	gene	11795	12139	.	+	.	ID=gene-AO052_06505;Name=AO052_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06505
LNKO01000088.1	Protein Homology	CDS	11795	12139	.	+	0	ID=cds-TMQ38288.1;Parent=gene-AO052_06505;Dbxref=NCBI_GP:TMQ38288.1;Name=TMQ38288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625764.1;locus_tag=AO052_06505;product=arsenate reductase;protein_id=TMQ38288.1;transl_table=11
LNKO01000088.1	Genbank	gene	12167	13300	.	+	.	ID=gene-AO052_06510;Name=AO052_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06510
LNKO01000088.1	Protein Homology	CDS	12167	13300	.	+	0	ID=cds-TMQ38289.1;Parent=gene-AO052_06510;Dbxref=NCBI_GP:TMQ38289.1;Name=TMQ38289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766881.1;locus_tag=AO052_06510;product=succinyl-diaminopimelate desuccinylase;protein_id=TMQ38289.1;transl_table=11
LNKO01000088.1	Genbank	gene	13302	13982	.	+	.	ID=gene-AO052_06515;Name=AO052_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06515
LNKO01000088.1	Protein Homology	CDS	13302	13982	.	+	0	ID=cds-TMQ38290.1;Parent=gene-AO052_06515;Dbxref=NCBI_GP:TMQ38290.1;Name=TMQ38290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634947.1;locus_tag=AO052_06515;product=peptidase M15;protein_id=TMQ38290.1;transl_table=11
LNKO01000088.1	Genbank	gene	14017	15087	.	-	.	ID=gene-AO052_06520;Name=AO052_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06520
LNKO01000088.1	Protein Homology	CDS	14017	15087	.	-	0	ID=cds-TMQ38291.1;Parent=gene-AO052_06520;Dbxref=NCBI_GP:TMQ38291.1;Name=TMQ38291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44513.1;locus_tag=AO052_06520;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ38291.1;transl_table=11
LNKO01000088.1	Genbank	gene	15074	16594	.	-	.	ID=gene-AO052_06525;Name=AO052_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06525
LNKO01000088.1	Protein Homology	CDS	15074	16594	.	-	0	ID=cds-TMQ38292.1;Parent=gene-AO052_06525;Dbxref=NCBI_GP:TMQ38292.1;Name=TMQ38292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701388.1;locus_tag=AO052_06525;product=Fe3+ dicitrate ABC transporter permease;protein_id=TMQ38292.1;transl_table=11
LNKO01000088.1	Genbank	gene	16712	17710	.	-	.	ID=gene-AO052_06530;Name=AO052_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06530
LNKO01000088.1	Protein Homology	CDS	16712	17710	.	-	0	ID=cds-TMQ38293.1;Parent=gene-AO052_06530;Dbxref=NCBI_GP:TMQ38293.1;Name=TMQ38293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P35755.3;locus_tag=AO052_06530;product=iron ABC transporter substrate-binding protein;protein_id=TMQ38293.1;transl_table=11
LNKO01000088.1	Genbank	gene	17862	19418	.	-	.	ID=gene-AO052_06535;Name=AO052_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06535
LNKO01000088.1	Protein Homology	CDS	17862	19418	.	-	0	ID=cds-TMQ38294.1;Parent=gene-AO052_06535;Dbxref=NCBI_GP:TMQ38294.1;Name=TMQ38294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525474.1;locus_tag=AO052_06535;product=methyltransferase;protein_id=TMQ38294.1;transl_table=11
LNKO01000088.1	Genbank	gene	20053	20547	.	+	.	ID=gene-AO052_06540;Name=AO052_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06540
LNKO01000088.1	Protein Homology	CDS	20053	20547	.	+	0	ID=cds-TMQ38313.1;Parent=gene-AO052_06540;Dbxref=NCBI_GP:TMQ38313.1;Name=TMQ38313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995675.1;locus_tag=AO052_06540;product=hypothetical protein;protein_id=TMQ38313.1;transl_table=11
LNKO01000088.1	Genbank	gene	20656	21411	.	+	.	ID=gene-AO052_06545;Name=AO052_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06545
LNKO01000088.1	Protein Homology	CDS	20656	21411	.	+	0	ID=cds-TMQ38295.1;Parent=gene-AO052_06545;Dbxref=NCBI_GP:TMQ38295.1;Name=TMQ38295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525473.1;locus_tag=AO052_06545;product=hypothetical protein;protein_id=TMQ38295.1;transl_table=11
LNKO01000088.1	Genbank	gene	21485	22186	.	-	.	ID=gene-AO052_06550;Name=AO052_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06550
LNKO01000088.1	Protein Homology	CDS	21485	22186	.	-	0	ID=cds-TMQ38296.1;Parent=gene-AO052_06550;Dbxref=NCBI_GP:TMQ38296.1;Name=TMQ38296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995680.1;locus_tag=AO052_06550;product=YggS family pyridoxal phosphate enzyme;protein_id=TMQ38296.1;transl_table=11
LNKO01000088.1	Genbank	gene	22500	24947	.	+	.	ID=gene-AO052_06555;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AO052_06555
LNKO01000088.1	Protein Homology	CDS	22500	24947	.	+	0	ID=cds-TMQ38297.1;Parent=gene-AO052_06555;Dbxref=NCBI_GP:TMQ38297.1;Name=TMQ38297.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44505.1;locus_tag=AO052_06555;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=TMQ38297.1;transl_table=11
LNKO01000088.1	Genbank	gene	24960	25904	.	+	.	ID=gene-AO052_06560;Name=AO052_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06560
LNKO01000088.1	Protein Homology	CDS	24960	25904	.	+	0	ID=cds-TMQ38298.1;Parent=gene-AO052_06560;Dbxref=NCBI_GP:TMQ38298.1;Name=TMQ38298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QP96.1;locus_tag=AO052_06560;product=homoserine kinase;protein_id=TMQ38298.1;transl_table=11
LNKO01000088.1	Genbank	gene	25947	27224	.	+	.	ID=gene-AO052_06565;Name=AO052_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06565
LNKO01000088.1	Protein Homology	CDS	25947	27224	.	+	0	ID=cds-TMQ38299.1;Parent=gene-AO052_06565;Dbxref=NCBI_GP:TMQ38299.1;Name=TMQ38299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658376.1;locus_tag=AO052_06565;product=threonine synthase;protein_id=TMQ38299.1;transl_table=11
LNKO01000088.1	Genbank	gene	27432	27507	.	-	.	ID=gene-AO052_06570;Name=AO052_06570;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_06570
LNKO01000088.1	tRNAscan-SE	tRNA	27432	27507	.	-	.	ID=rna-AO052_06570;Parent=gene-AO052_06570;anticodon=(pos:complement(27472..27474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_06570;product=tRNA-Lys
LNKO01000088.1	tRNAscan-SE	exon	27432	27507	.	-	.	ID=exon-AO052_06570-1;Parent=rna-AO052_06570;anticodon=(pos:complement(27472..27474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_06570;product=tRNA-Lys
LNKO01000088.1	Genbank	gene	27773	28786	.	-	.	ID=gene-AO052_06575;Name=AO052_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06575
LNKO01000088.1	Protein Homology	CDS	27773	28786	.	-	0	ID=cds-TMQ38300.1;Parent=gene-AO052_06575;Dbxref=NCBI_GP:TMQ38300.1;Name=TMQ38300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043466.1;locus_tag=AO052_06575;product=integrase;protein_id=TMQ38300.1;transl_table=11
LNKO01000088.1	Genbank	gene	28789	29100	.	-	.	ID=gene-AO052_06580;Name=AO052_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06580
LNKO01000088.1	Protein Homology	CDS	28789	29100	.	-	0	ID=cds-TMQ38301.1;Parent=gene-AO052_06580;Dbxref=NCBI_GP:TMQ38301.1;Name=TMQ38301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525468.1;locus_tag=AO052_06580;product=recombinase;protein_id=TMQ38301.1;transl_table=11
LNKO01000088.1	Genbank	gene	29082	29309	.	-	.	ID=gene-AO052_06585;Name=AO052_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06585
LNKO01000088.1	Protein Homology	CDS	29082	29309	.	-	0	ID=cds-TMQ38302.1;Parent=gene-AO052_06585;Dbxref=NCBI_GP:TMQ38302.1;Name=TMQ38302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005555659.1;locus_tag=AO052_06585;product=hypothetical protein;protein_id=TMQ38302.1;transl_table=11
LNKO01000088.1	Genbank	gene	29346	29549	.	-	.	ID=gene-AO052_06590;Name=AO052_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06590
LNKO01000088.1	Protein Homology	CDS	29346	29549	.	-	0	ID=cds-TMQ38303.1;Parent=gene-AO052_06590;Dbxref=NCBI_GP:TMQ38303.1;Name=TMQ38303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355802.1;locus_tag=AO052_06590;product=hypothetical protein;protein_id=TMQ38303.1;transl_table=11
LNKO01000088.1	Genbank	gene	29549	29791	.	-	.	ID=gene-AO052_06595;Name=AO052_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06595
LNKO01000088.1	Protein Homology	CDS	29549	29791	.	-	0	ID=cds-TMQ38304.1;Parent=gene-AO052_06595;Dbxref=NCBI_GP:TMQ38304.1;Name=TMQ38304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643003.1;locus_tag=AO052_06595;product=hypothetical protein;protein_id=TMQ38304.1;transl_table=11
LNKO01000088.1	Genbank	gene	30136	30510	.	-	.	ID=gene-AO052_06600;Name=AO052_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06600
LNKO01000088.1	Protein Homology	CDS	30136	30510	.	-	0	ID=cds-TMQ38305.1;Parent=gene-AO052_06600;Dbxref=NCBI_GP:TMQ38305.1;Name=TMQ38305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525467.1;locus_tag=AO052_06600;product=chromosome partitioning protein ParA;protein_id=TMQ38305.1;transl_table=11
LNKO01000088.1	Genbank	gene	30633	30824	.	+	.	ID=gene-AO052_06605;Name=AO052_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06605
LNKO01000088.1	GeneMarkS+	CDS	30633	30824	.	+	0	ID=cds-TMQ38306.1;Parent=gene-AO052_06605;Dbxref=NCBI_GP:TMQ38306.1;Name=TMQ38306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_06605;product=hypothetical protein;protein_id=TMQ38306.1;transl_table=11
LNKO01000088.1	Genbank	gene	30821	31060	.	+	.	ID=gene-AO052_06610;Name=AO052_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06610
LNKO01000088.1	Protein Homology	CDS	30821	31060	.	+	0	ID=cds-TMQ38307.1;Parent=gene-AO052_06610;Dbxref=NCBI_GP:TMQ38307.1;Name=TMQ38307.1;Note=phage-associated protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043472.1;locus_tag=AO052_06610;product=hypothetical protein;protein_id=TMQ38307.1;transl_table=11
LNKO01000088.1	Genbank	gene	31193	31696	.	+	.	ID=gene-AO052_06615;Name=AO052_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06615
LNKO01000088.1	Protein Homology	CDS	31193	31696	.	+	0	ID=cds-TMQ38308.1;Parent=gene-AO052_06615;Dbxref=NCBI_GP:TMQ38308.1;Name=TMQ38308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525466.1;locus_tag=AO052_06615;product=hypothetical protein;protein_id=TMQ38308.1;transl_table=11
LNKO01000088.1	Genbank	gene	31715	32050	.	+	.	ID=gene-AO052_06620;Name=AO052_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06620
LNKO01000088.1	Protein Homology	CDS	31715	32050	.	+	0	ID=cds-TMQ38309.1;Parent=gene-AO052_06620;Dbxref=NCBI_GP:TMQ38309.1;Name=TMQ38309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525465.1;locus_tag=AO052_06620;product=hypothetical protein;protein_id=TMQ38309.1;transl_table=11
LNKO01000088.1	Genbank	gene	32111	34450	.	+	.	ID=gene-AO052_06625;Name=AO052_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06625
LNKO01000088.1	Protein Homology	CDS	32111	34450	.	+	0	ID=cds-TMQ38310.1;Parent=gene-AO052_06625;Dbxref=NCBI_GP:TMQ38310.1;Name=TMQ38310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525464.1;locus_tag=AO052_06625;product=replication protein;protein_id=TMQ38310.1;transl_table=11
LNKO01000088.1	Genbank	gene	34462	34767	.	+	.	ID=gene-AO052_06630;Name=AO052_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06630
LNKO01000088.1	Protein Homology	CDS	34462	34767	.	+	0	ID=cds-TMQ38311.1;Parent=gene-AO052_06630;Dbxref=NCBI_GP:TMQ38311.1;Name=TMQ38311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525463.1;locus_tag=AO052_06630;product=hypothetical protein;protein_id=TMQ38311.1;transl_table=11
LNKO01000088.1	Genbank	gene	34777	35295	.	+	.	ID=gene-AO052_06635;Name=AO052_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06635
LNKO01000088.1	Protein Homology	CDS	34777	35295	.	+	0	ID=cds-TMQ38312.1;Parent=gene-AO052_06635;Dbxref=NCBI_GP:TMQ38312.1;Name=TMQ38312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525462.1;locus_tag=AO052_06635;product=phage N-6-adenine-methyltransferase;protein_id=TMQ38312.1;transl_table=11
##sequence-region LNKO01000089.1 1 10924
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000089.1	Genbank	region	1	10924	.	+	.	ID=LNKO01000089.1:1..10924;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000089.1	Genbank	gene	61	240	.	+	.	ID=gene-AO052_06640;Name=AO052_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06640
LNKO01000089.1	Protein Homology	CDS	61	240	.	+	0	ID=cds-TMQ38248.1;Parent=gene-AO052_06640;Dbxref=NCBI_GP:TMQ38248.1;Name=TMQ38248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017807138.1;locus_tag=AO052_06640;product=hypothetical protein;protein_id=TMQ38248.1;transl_table=11
LNKO01000089.1	Genbank	gene	304	711	.	+	.	ID=gene-AO052_06645;Name=AO052_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06645
LNKO01000089.1	Protein Homology	CDS	304	711	.	+	0	ID=cds-TMQ38249.1;Parent=gene-AO052_06645;Dbxref=NCBI_GP:TMQ38249.1;Name=TMQ38249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525461.1;locus_tag=AO052_06645;product=hypothetical protein;protein_id=TMQ38249.1;transl_table=11
LNKO01000089.1	Genbank	gene	742	1002	.	-	.	ID=gene-AO052_06650;Name=AO052_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06650
LNKO01000089.1	Protein Homology	CDS	742	1002	.	-	0	ID=cds-TMQ38250.1;Parent=gene-AO052_06650;Dbxref=NCBI_GP:TMQ38250.1;Name=TMQ38250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525460.1;locus_tag=AO052_06650;product=transcriptional regulator;protein_id=TMQ38250.1;transl_table=11
LNKO01000089.1	Genbank	gene	1084	2118	.	-	.	ID=gene-AO052_06655;Name=AO052_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06655
LNKO01000089.1	Protein Homology	CDS	1084	2118	.	-	0	ID=cds-TMQ38251.1;Parent=gene-AO052_06655;Dbxref=NCBI_GP:TMQ38251.1;Name=TMQ38251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525459.1;locus_tag=AO052_06655;product=phage portal protein;protein_id=TMQ38251.1;transl_table=11
LNKO01000089.1	Protein Homology	pseudogene	2108	3912	.	-	.	ID=gene-AO052_06660;Name=AO052_06660;Note=disrupted;description=terminase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06660;pseudo=true
LNKO01000089.1	Genbank	gene	4116	5003	.	+	.	ID=gene-AO052_06665;Name=AO052_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06665
LNKO01000089.1	Protein Homology	CDS	4116	5003	.	+	0	ID=cds-TMQ38252.1;Parent=gene-AO052_06665;Dbxref=NCBI_GP:TMQ38252.1;Name=TMQ38252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525457.1;locus_tag=AO052_06665;product=phage capsid protein;protein_id=TMQ38252.1;transl_table=11
LNKO01000089.1	Genbank	gene	5007	6017	.	+	.	ID=gene-AO052_06670;Name=AO052_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06670
LNKO01000089.1	Protein Homology	CDS	5007	6017	.	+	0	ID=cds-TMQ38253.1;Parent=gene-AO052_06670;Dbxref=NCBI_GP:TMQ38253.1;Name=TMQ38253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043487.1;locus_tag=AO052_06670;product=capsid protein;protein_id=TMQ38253.1;transl_table=11
LNKO01000089.1	Genbank	gene	6058	6876	.	+	.	ID=gene-AO052_06675;Name=AO052_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06675
LNKO01000089.1	Protein Homology	CDS	6058	6876	.	+	0	ID=cds-TMQ38254.1;Parent=gene-AO052_06675;Dbxref=NCBI_GP:TMQ38254.1;Name=TMQ38254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525455.1;locus_tag=AO052_06675;product=terminase;protein_id=TMQ38254.1;transl_table=11
LNKO01000089.1	Genbank	gene	6869	7321	.	+	.	ID=gene-AO052_06680;Name=AO052_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06680
LNKO01000089.1	Protein Homology	CDS	6869	7321	.	+	0	ID=cds-TMQ38255.1;Parent=gene-AO052_06680;Dbxref=NCBI_GP:TMQ38255.1;Name=TMQ38255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642958.1;locus_tag=AO052_06680;product=head stabilization protein;protein_id=TMQ38255.1;transl_table=11
LNKO01000089.1	Genbank	gene	7309	7791	.	+	.	ID=gene-AO052_06685;Name=AO052_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06685
LNKO01000089.1	Protein Homology	CDS	7309	7791	.	+	0	ID=cds-TMQ38256.1;Parent=gene-AO052_06685;Dbxref=NCBI_GP:TMQ38256.1;Name=TMQ38256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525453.1;locus_tag=AO052_06685;product=hypothetical protein;protein_id=TMQ38256.1;transl_table=11
LNKO01000089.1	Genbank	gene	7788	8513	.	+	.	ID=gene-AO052_06690;Name=AO052_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06690
LNKO01000089.1	Protein Homology	CDS	7788	8513	.	+	0	ID=cds-TMQ38257.1;Parent=gene-AO052_06690;Dbxref=NCBI_GP:TMQ38257.1;Name=TMQ38257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525452.1;locus_tag=AO052_06690;product=virion morphogenesis protein;protein_id=TMQ38257.1;transl_table=11
LNKO01000089.1	Genbank	gene	8775	9905	.	+	.	ID=gene-AO052_06695;Name=AO052_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06695
LNKO01000089.1	Protein Homology	CDS	8775	9905	.	+	0	ID=cds-TMQ38258.1;Parent=gene-AO052_06695;Dbxref=NCBI_GP:TMQ38258.1;Name=TMQ38258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525451.1;locus_tag=AO052_06695;product=phage tail protein;protein_id=TMQ38258.1;transl_table=11
LNKO01000089.1	Genbank	gene	9909	10361	.	+	.	ID=gene-AO052_06700;Name=AO052_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06700
LNKO01000089.1	Protein Homology	CDS	9909	10361	.	+	0	ID=cds-TMQ38259.1;Parent=gene-AO052_06700;Dbxref=NCBI_GP:TMQ38259.1;Name=TMQ38259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525450.1;locus_tag=AO052_06700;product=phage tail protein;protein_id=TMQ38259.1;transl_table=11
LNKO01000089.1	Genbank	gene	10448	10684	.	+	.	ID=gene-AO052_06705;Name=AO052_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06705
LNKO01000089.1	Protein Homology	CDS	10448	10684	.	+	0	ID=cds-TMQ38260.1;Parent=gene-AO052_06705;Dbxref=NCBI_GP:TMQ38260.1;Name=TMQ38260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043494.1;locus_tag=AO052_06705;product=holin;protein_id=TMQ38260.1;transl_table=11
LNKO01000089.1	Genbank	pseudogene	10677	10924	.	+	.	ID=gene-AO052_06710;Name=AO052_06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06710;pseudo=true
LNKO01000089.1	Protein Homology	CDS	10677	10924	.	+	0	ID=cds-AO052_06710;Parent=gene-AO052_06710;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667725.1;locus_tag=AO052_06710;pseudo=true;transl_table=11
##sequence-region LNKO01000090.1 1 1536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000090.1	Genbank	region	1	1536	.	+	.	ID=LNKO01000090.1:1..1536;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000090.1	Genbank	pseudogene	1	315	.	+	.	ID=gene-AO052_06715;Name=AO052_06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06715;pseudo=true
LNKO01000090.1	Protein Homology	CDS	1	315	.	+	0	ID=cds-AO052_06715;Parent=gene-AO052_06715;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536831.1;locus_tag=AO052_06715;pseudo=true;transl_table=11
LNKO01000090.1	Genbank	gene	300	647	.	+	.	ID=gene-AO052_06720;Name=AO052_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06720
LNKO01000090.1	Protein Homology	CDS	300	647	.	+	0	ID=cds-TMQ38226.1;Parent=gene-AO052_06720;Dbxref=NCBI_GP:TMQ38226.1;Name=TMQ38226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525448.1;locus_tag=AO052_06720;product=hypothetical protein;protein_id=TMQ38226.1;transl_table=11
LNKO01000090.1	Genbank	gene	828	1136	.	+	.	ID=gene-AO052_06725;Name=AO052_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06725
LNKO01000090.1	Protein Homology	CDS	828	1136	.	+	0	ID=cds-TMQ38227.1;Parent=gene-AO052_06725;Dbxref=NCBI_GP:TMQ38227.1;Name=TMQ38227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642943.1;locus_tag=AO052_06725;product=hypothetical protein;protein_id=TMQ38227.1;transl_table=11
LNKO01000090.1	Genbank	pseudogene	1323	1536	.	+	.	ID=gene-AO052_06730;Name=AO052_06730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06730;pseudo=true
LNKO01000090.1	GeneMarkS+	CDS	1323	1536	.	+	0	ID=cds-AO052_06730;Parent=gene-AO052_06730;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_06730;pseudo=true;transl_table=11
##sequence-region LNKO01000091.1 1 5363
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000091.1	Genbank	region	1	5363	.	+	.	ID=LNKO01000091.1:1..5363;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000091.1	Genbank	gene	1	2063	.	+	.	ID=gene-AO052_06735;Name=AO052_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06735;partial=true;start_range=.,1
LNKO01000091.1	Protein Homology	CDS	1	2063	.	+	2	ID=cds-TMQ38084.1;Parent=gene-AO052_06735;Dbxref=NCBI_GP:TMQ38084.1;Name=TMQ38084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642940.1;locus_tag=AO052_06735;partial=true;product=phage tail tape measure protein;protein_id=TMQ38084.1;start_range=.,1;transl_table=11
LNKO01000091.1	Genbank	gene	2067	2402	.	+	.	ID=gene-AO052_06740;Name=AO052_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06740
LNKO01000091.1	Protein Homology	CDS	2067	2402	.	+	0	ID=cds-TMQ38085.1;Parent=gene-AO052_06740;Dbxref=NCBI_GP:TMQ38085.1;Name=TMQ38085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043499.1;locus_tag=AO052_06740;product=hypothetical protein;protein_id=TMQ38085.1;transl_table=11
LNKO01000091.1	Genbank	gene	2395	3564	.	+	.	ID=gene-AO052_06745;Name=AO052_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06745
LNKO01000091.1	Protein Homology	CDS	2395	3564	.	+	0	ID=cds-TMQ38086.1;Parent=gene-AO052_06745;Dbxref=NCBI_GP:TMQ38086.1;Name=TMQ38086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525444.1;locus_tag=AO052_06745;product=hypothetical protein;protein_id=TMQ38086.1;transl_table=11
LNKO01000091.1	Genbank	gene	3574	4098	.	+	.	ID=gene-AO052_06750;Name=AO052_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06750
LNKO01000091.1	Protein Homology	CDS	3574	4098	.	+	0	ID=cds-TMQ38087.1;Parent=gene-AO052_06750;Dbxref=NCBI_GP:TMQ38087.1;Name=TMQ38087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536837.1;locus_tag=AO052_06750;product=phage tail protein;protein_id=TMQ38087.1;transl_table=11
LNKO01000091.1	Genbank	pseudogene	4125	5363	.	+	.	ID=gene-AO052_06755;Name=AO052_06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06755;pseudo=true
LNKO01000091.1	Protein Homology	CDS	4125	5363	.	+	0	ID=cds-AO052_06755;Parent=gene-AO052_06755;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525442.1;locus_tag=AO052_06755;pseudo=true;transl_table=11
##sequence-region LNKO01000092.1 1 27890
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000092.1	Genbank	region	1	27890	.	+	.	ID=LNKO01000092.1:1..27890;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000092.1	Genbank	pseudogene	1	262	.	+	.	ID=gene-AO052_06760;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO052_06760;pseudo=true
LNKO01000092.1	Protein Homology	CDS	1	262	.	+	1	ID=cds-AO052_06760;Parent=gene-AO052_06760;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759586.1;locus_tag=AO052_06760;pseudo=true;transl_table=11
LNKO01000092.1	Genbank	gene	393	680	.	-	.	ID=gene-AO052_06765;Name=AO052_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06765
LNKO01000092.1	Protein Homology	CDS	393	680	.	-	0	ID=cds-TMQ38033.1;Parent=gene-AO052_06765;Dbxref=NCBI_GP:TMQ38033.1;Name=TMQ38033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526387.1;locus_tag=AO052_06765;product=hypothetical protein;protein_id=TMQ38033.1;transl_table=11
LNKO01000092.1	Genbank	gene	689	1048	.	-	.	ID=gene-AO052_06770;Name=AO052_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06770
LNKO01000092.1	Protein Homology	CDS	689	1048	.	-	0	ID=cds-TMQ38034.1;Parent=gene-AO052_06770;Dbxref=NCBI_GP:TMQ38034.1;Name=TMQ38034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644410.1;locus_tag=AO052_06770;product=sulfur relay protein TusC/DsrF;protein_id=TMQ38034.1;transl_table=11
LNKO01000092.1	Genbank	gene	1045	1425	.	-	.	ID=gene-AO052_06775;Name=AO052_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06775
LNKO01000092.1	Protein Homology	CDS	1045	1425	.	-	0	ID=cds-TMQ38035.1;Parent=gene-AO052_06775;Dbxref=NCBI_GP:TMQ38035.1;Name=TMQ38035.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499553.1;locus_tag=AO052_06775;product=sulfur relay protein TusD;protein_id=TMQ38035.1;transl_table=11
LNKO01000092.1	Genbank	gene	1425	2090	.	-	.	ID=gene-AO052_06780;Name=AO052_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06780
LNKO01000092.1	Protein Homology	CDS	1425	2090	.	-	0	ID=cds-TMQ38036.1;Parent=gene-AO052_06780;Dbxref=NCBI_GP:TMQ38036.1;Name=TMQ38036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692020.1;locus_tag=AO052_06780;product=hypothetical protein;protein_id=TMQ38036.1;transl_table=11
LNKO01000092.1	Genbank	gene	2180	2905	.	-	.	ID=gene-AO052_06785;Name=AO052_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06785
LNKO01000092.1	Protein Homology	CDS	2180	2905	.	-	0	ID=cds-TMQ38037.1;Parent=gene-AO052_06785;Dbxref=NCBI_GP:TMQ38037.1;Name=TMQ38037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44760.1;locus_tag=AO052_06785;product=peptidylprolyl isomerase;protein_id=TMQ38037.1;transl_table=11
LNKO01000092.1	Genbank	gene	3003	3224	.	+	.	ID=gene-AO052_06790;Name=AO052_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06790
LNKO01000092.1	Protein Homology	CDS	3003	3224	.	+	0	ID=cds-TMQ38038.1;Parent=gene-AO052_06790;Dbxref=NCBI_GP:TMQ38038.1;Name=TMQ38038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44759.1;locus_tag=AO052_06790;product=SlyX protein;protein_id=TMQ38038.1;transl_table=11
LNKO01000092.1	Genbank	gene	3316	4041	.	-	.	ID=gene-AO052_06795;Name=AO052_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06795
LNKO01000092.1	Protein Homology	CDS	3316	4041	.	-	0	ID=cds-TMQ38039.1;Parent=gene-AO052_06795;Dbxref=NCBI_GP:TMQ38039.1;Name=TMQ38039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692022.1;locus_tag=AO052_06795;product=glutathione peroxidase;protein_id=TMQ38039.1;transl_table=11
LNKO01000092.1	Genbank	gene	4165	5070	.	+	.	ID=gene-AO052_06800;Name=AO052_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06800
LNKO01000092.1	Protein Homology	CDS	4165	5070	.	+	0	ID=cds-TMQ38040.1;Parent=gene-AO052_06800;Dbxref=NCBI_GP:TMQ38040.1;Name=TMQ38040.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44418.1;locus_tag=AO052_06800;product=transcriptional regulator;protein_id=TMQ38040.1;transl_table=11
LNKO01000092.1	Genbank	gene	5070	5687	.	+	.	ID=gene-AO052_06805;Name=AO052_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06805
LNKO01000092.1	Protein Homology	CDS	5070	5687	.	+	0	ID=cds-TMQ38041.1;Parent=gene-AO052_06805;Dbxref=NCBI_GP:TMQ38041.1;Name=TMQ38041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649556.1;locus_tag=AO052_06805;product=GntR family transcriptional regulator;protein_id=TMQ38041.1;transl_table=11
LNKO01000092.1	Genbank	gene	5758	6234	.	-	.	ID=gene-AO052_06810;Name=AO052_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06810
LNKO01000092.1	Protein Homology	CDS	5758	6234	.	-	0	ID=cds-TMQ38042.1;Parent=gene-AO052_06810;Dbxref=NCBI_GP:TMQ38042.1;Name=TMQ38042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526392.1;locus_tag=AO052_06810;product=transcription elongation factor GreB;protein_id=TMQ38042.1;transl_table=11
LNKO01000092.1	Genbank	gene	6329	8641	.	+	.	ID=gene-AO052_06815;Name=AO052_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06815
LNKO01000092.1	Protein Homology	CDS	6329	8641	.	+	0	ID=cds-TMQ38043.1;Parent=gene-AO052_06815;Dbxref=NCBI_GP:TMQ38043.1;Name=TMQ38043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499558.1;locus_tag=AO052_06815;product=RNA-binding transcriptional accessory protein;protein_id=TMQ38043.1;transl_table=11
LNKO01000092.1	Genbank	gene	8767	11187	.	+	.	ID=gene-AO052_06820;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AO052_06820
LNKO01000092.1	Protein Homology	CDS	8767	11187	.	+	0	ID=cds-TMQ38044.1;Parent=gene-AO052_06820;Dbxref=NCBI_GP:TMQ38044.1;Name=TMQ38044.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692029.1;locus_tag=AO052_06820;product=DNA gyrase subunit B;protein_id=TMQ38044.1;transl_table=11
LNKO01000092.1	Genbank	gene	11339	12013	.	+	.	ID=gene-AO052_06825;Name=AO052_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06825
LNKO01000092.1	Protein Homology	CDS	11339	12013	.	+	0	ID=cds-TMQ38045.1;Parent=gene-AO052_06825;Dbxref=NCBI_GP:TMQ38045.1;Name=TMQ38045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995224.1;locus_tag=AO052_06825;product=ribulose phosphate epimerase;protein_id=TMQ38045.1;transl_table=11
LNKO01000092.1	Genbank	gene	12059	12733	.	+	.	ID=gene-AO052_06830;Name=AO052_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06830
LNKO01000092.1	Protein Homology	CDS	12059	12733	.	+	0	ID=cds-TMQ38046.1;Parent=gene-AO052_06830;Dbxref=NCBI_GP:TMQ38046.1;Name=TMQ38046.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526394.1;locus_tag=AO052_06830;product=phosphoglycolate phosphatase;protein_id=TMQ38046.1;transl_table=11
LNKO01000092.1	Genbank	gene	12798	13790	.	-	.	ID=gene-AO052_06835;Name=AO052_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06835
LNKO01000092.1	Protein Homology	CDS	12798	13790	.	-	0	ID=cds-TMQ38047.1;Parent=gene-AO052_06835;Dbxref=NCBI_GP:TMQ38047.1;Name=TMQ38047.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701738.1;locus_tag=AO052_06835;product=asparagine synthetase A;protein_id=TMQ38047.1;transl_table=11
LNKO01000092.1	Genbank	gene	13944	14396	.	+	.	ID=gene-AO052_06840;Name=AO052_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06840
LNKO01000092.1	Protein Homology	CDS	13944	14396	.	+	0	ID=cds-TMQ38048.1;Parent=gene-AO052_06840;Dbxref=NCBI_GP:TMQ38048.1;Name=TMQ38048.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697406.1;locus_tag=AO052_06840;product=transcriptional regulator;protein_id=TMQ38048.1;transl_table=11
LNKO01000092.1	Genbank	gene	14423	14818	.	-	.	ID=gene-AO052_06845;Name=AO052_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06845
LNKO01000092.1	Protein Homology	CDS	14423	14818	.	-	0	ID=cds-TMQ38049.1;Parent=gene-AO052_06845;Dbxref=NCBI_GP:TMQ38049.1;Name=TMQ38049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44754.1;locus_tag=AO052_06845;product=heat-shock protein;protein_id=TMQ38049.1;transl_table=11
LNKO01000092.1	Genbank	gene	15047	17035	.	+	.	ID=gene-AO052_06850;Name=AO052_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06850
LNKO01000092.1	Protein Homology	CDS	15047	17035	.	+	0	ID=cds-TMQ38050.1;Parent=gene-AO052_06850;Dbxref=NCBI_GP:TMQ38050.1;Name=TMQ38050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44016.2;locus_tag=AO052_06850;product=oligopeptide transporter;protein_id=TMQ38050.1;transl_table=11
LNKO01000092.1	Genbank	gene	17088	17504	.	+	.	ID=gene-AO052_06855;Name=AO052_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06855
LNKO01000092.1	Protein Homology	CDS	17088	17504	.	+	0	ID=cds-TMQ38051.1;Parent=gene-AO052_06855;Dbxref=NCBI_GP:TMQ38051.1;Name=TMQ38051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526395.1;locus_tag=AO052_06855;product=hypothetical protein;protein_id=TMQ38051.1;transl_table=11
LNKO01000092.1	Genbank	gene	17509	18318	.	+	.	ID=gene-AO052_06860;Name=AO052_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06860
LNKO01000092.1	Protein Homology	CDS	17509	18318	.	+	0	ID=cds-TMQ38052.1;Parent=gene-AO052_06860;Dbxref=NCBI_GP:TMQ38052.1;Name=TMQ38052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526396.1;locus_tag=AO052_06860;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=TMQ38052.1;transl_table=11
LNKO01000092.1	Genbank	gene	18394	19878	.	+	.	ID=gene-AO052_06865;Name=AO052_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06865
LNKO01000092.1	Protein Homology	CDS	18394	19878	.	+	0	ID=cds-TMQ38053.1;Parent=gene-AO052_06865;Dbxref=NCBI_GP:TMQ38053.1;Name=TMQ38053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356969.1;locus_tag=AO052_06865;product=glucose-6-phosphate dehydrogenase;protein_id=TMQ38053.1;transl_table=11
LNKO01000092.1	Genbank	gene	19967	20668	.	+	.	ID=gene-AO052_06870;Name=AO052_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06870
LNKO01000092.1	Protein Homology	CDS	19967	20668	.	+	0	ID=cds-TMQ38054.1;Parent=gene-AO052_06870;Dbxref=NCBI_GP:TMQ38054.1;Name=TMQ38054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526398.1;locus_tag=AO052_06870;product=6-phosphogluconolactonase;protein_id=TMQ38054.1;transl_table=11
LNKO01000092.1	Genbank	gene	20693	21259	.	+	.	ID=gene-AO052_06875;Name=AO052_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06875
LNKO01000092.1	Protein Homology	CDS	20693	21259	.	+	0	ID=cds-TMQ38055.1;Parent=gene-AO052_06875;Dbxref=NCBI_GP:TMQ38055.1;Name=TMQ38055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526399.1;locus_tag=AO052_06875;product=phosphoribosyltransferase;protein_id=TMQ38055.1;transl_table=11
LNKO01000092.1	Genbank	gene	21281	21826	.	+	.	ID=gene-AO052_06880;Name=AO052_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06880
LNKO01000092.1	Protein Homology	CDS	21281	21826	.	+	0	ID=cds-TMQ38056.1;Parent=gene-AO052_06880;Dbxref=NCBI_GP:TMQ38056.1;Name=TMQ38056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526400.1;locus_tag=AO052_06880;product=XRE family transcriptional regulator;protein_id=TMQ38056.1;transl_table=11
LNKO01000092.1	Genbank	gene	21849	23303	.	+	.	ID=gene-AO052_06885;Name=AO052_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06885
LNKO01000092.1	Protein Homology	CDS	21849	23303	.	+	0	ID=cds-TMQ38057.1;Parent=gene-AO052_06885;Dbxref=NCBI_GP:TMQ38057.1;Name=TMQ38057.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005714317.1;locus_tag=AO052_06885;product=6-phosphogluconate dehydrogenase;protein_id=TMQ38057.1;transl_table=11
LNKO01000092.1	Genbank	gene	23429	24052	.	-	.	ID=gene-AO052_06890;Name=AO052_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06890
LNKO01000092.1	Protein Homology	CDS	23429	24052	.	-	0	ID=cds-TMQ38058.1;Parent=gene-AO052_06890;Dbxref=NCBI_GP:TMQ38058.1;Name=TMQ38058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550366.1;locus_tag=AO052_06890;product=hypothetical protein;protein_id=TMQ38058.1;transl_table=11
LNKO01000092.1	Genbank	gene	24062	24889	.	-	.	ID=gene-AO052_06895;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AO052_06895
LNKO01000092.1	Protein Homology	CDS	24062	24889	.	-	0	ID=cds-TMQ38059.1;Parent=gene-AO052_06895;Dbxref=NCBI_GP:TMQ38059.1;Name=TMQ38059.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639409.1;locus_tag=AO052_06895;product=diadenosine tetraphosphatase;protein_id=TMQ38059.1;transl_table=11
LNKO01000092.1	Protein Homology	pseudogene	25008	25888	.	+	.	ID=gene-AO052_06900;Name=AO052_06900;Note=disrupted;description=lipooligosaccharide biosynthesis protein lex-1;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06900;pseudo=true
LNKO01000092.1	Genbank	gene	25927	26790	.	-	.	ID=gene-AO052_06905;Name=AO052_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06905
LNKO01000092.1	Protein Homology	CDS	25927	26790	.	-	0	ID=cds-TMQ38060.1;Parent=gene-AO052_06905;Dbxref=NCBI_GP:TMQ38060.1;Name=TMQ38060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692054.1;locus_tag=AO052_06905;product=rRNA methyltransferase;protein_id=TMQ38060.1;transl_table=11
LNKO01000092.1	Genbank	gene	26874	27869	.	-	.	ID=gene-AO052_06910;Name=AO052_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06910
LNKO01000092.1	Protein Homology	CDS	26874	27869	.	-	0	ID=cds-TMQ38061.1;Parent=gene-AO052_06910;Dbxref=NCBI_GP:TMQ38061.1;Name=TMQ38061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115831.1;locus_tag=AO052_06910;product=hypothetical protein;protein_id=TMQ38061.1;transl_table=11
##sequence-region LNKO01000093.1 1 883
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000093.1	Genbank	region	1	883	.	+	.	ID=LNKO01000093.1:1..883;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000093.1	Protein Homology	pseudogene	65	883	.	-	.	ID=gene-AO052_06915;Name=AO052_06915;Note=disrupted;description=lipooligosaccharide biosynthesis protein lic2B;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_06915;pseudo=true
##sequence-region LNKO01000094.1 1 21068
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000094.1	Genbank	region	1	21068	.	+	.	ID=LNKO01000094.1:1..21068;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000094.1	Genbank	gene	134	352	.	+	.	ID=gene-AO052_06920;Name=AO052_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06920
LNKO01000094.1	Protein Homology	CDS	134	352	.	+	0	ID=cds-TMQ37945.1;Parent=gene-AO052_06920;Dbxref=NCBI_GP:TMQ37945.1;Name=TMQ37945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016955625.1;locus_tag=AO052_06920;product=translation initiation factor IF-1;protein_id=TMQ37945.1;transl_table=11
LNKO01000094.1	Genbank	gene	552	929	.	+	.	ID=gene-AO052_06925;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AO052_06925
LNKO01000094.1	Protein Homology	CDS	552	929	.	+	0	ID=cds-TMQ37924.1;Parent=gene-AO052_06925;Dbxref=NCBI_GP:TMQ37924.1;Name=TMQ37924.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500411.1;locus_tag=AO052_06925;product=30S ribosomal protein S6;protein_id=TMQ37924.1;transl_table=11
LNKO01000094.1	Genbank	gene	916	1242	.	+	.	ID=gene-AO052_06930;Name=AO052_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06930
LNKO01000094.1	Protein Homology	CDS	916	1242	.	+	0	ID=cds-TMQ37925.1;Parent=gene-AO052_06930;Dbxref=NCBI_GP:TMQ37925.1;Name=TMQ37925.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995205.1;locus_tag=AO052_06930;product=primosomal replication protein N;protein_id=TMQ37925.1;transl_table=11
LNKO01000094.1	Genbank	gene	1255	1482	.	+	.	ID=gene-AO052_06935;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AO052_06935
LNKO01000094.1	Protein Homology	CDS	1255	1482	.	+	0	ID=cds-TMQ37926.1;Parent=gene-AO052_06935;Dbxref=NCBI_GP:TMQ37926.1;Name=TMQ37926.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005705387.1;locus_tag=AO052_06935;product=30S ribosomal protein S18;protein_id=TMQ37926.1;transl_table=11
LNKO01000094.1	Genbank	gene	1499	1948	.	+	.	ID=gene-AO052_06940;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AO052_06940
LNKO01000094.1	Protein Homology	CDS	1499	1948	.	+	0	ID=cds-TMQ37927.1;Parent=gene-AO052_06940;Dbxref=NCBI_GP:TMQ37927.1;Name=TMQ37927.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064775.1;locus_tag=AO052_06940;product=50S ribosomal protein L9;protein_id=TMQ37927.1;transl_table=11
LNKO01000094.1	Genbank	gene	2121	3767	.	-	.	ID=gene-AO052_06945;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=AO052_06945
LNKO01000094.1	Protein Homology	CDS	2121	3767	.	-	0	ID=cds-TMQ37928.1;Parent=gene-AO052_06945;Dbxref=NCBI_GP:TMQ37928.1;Name=TMQ37928.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664451.1;locus_tag=AO052_06945;product=molecular chaperone GroEL;protein_id=TMQ37928.1;transl_table=11
LNKO01000094.1	Genbank	gene	3787	4077	.	-	.	ID=gene-AO052_06950;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AO052_06950
LNKO01000094.1	Protein Homology	CDS	3787	4077	.	-	0	ID=cds-TMQ37929.1;Parent=gene-AO052_06950;Dbxref=NCBI_GP:TMQ37929.1;Name=TMQ37929.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356907.1;locus_tag=AO052_06950;product=molecular chaperone GroES;protein_id=TMQ37929.1;transl_table=11
LNKO01000094.1	Genbank	gene	4240	4542	.	+	.	ID=gene-AO052_06955;Name=AO052_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06955
LNKO01000094.1	Protein Homology	CDS	4240	4542	.	+	0	ID=cds-TMQ37930.1;Parent=gene-AO052_06955;Dbxref=NCBI_GP:TMQ37930.1;Name=TMQ37930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355722.1;locus_tag=AO052_06955;product=urease subunit gamma;protein_id=TMQ37930.1;transl_table=11
LNKO01000094.1	Genbank	gene	4619	4924	.	+	.	ID=gene-AO052_06960;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AO052_06960
LNKO01000094.1	Protein Homology	CDS	4619	4924	.	+	0	ID=cds-TMQ37931.1;Parent=gene-AO052_06960;Dbxref=NCBI_GP:TMQ37931.1;Name=TMQ37931.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701724.1;locus_tag=AO052_06960;product=urease subunit beta;protein_id=TMQ37931.1;transl_table=11
LNKO01000094.1	Genbank	gene	4936	6654	.	+	.	ID=gene-AO052_06965;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AO052_06965
LNKO01000094.1	Protein Homology	CDS	4936	6654	.	+	0	ID=cds-TMQ37932.1;Parent=gene-AO052_06965;Dbxref=NCBI_GP:TMQ37932.1;Name=TMQ37932.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706620.1;locus_tag=AO052_06965;product=urease subunit alpha;protein_id=TMQ37932.1;transl_table=11
LNKO01000094.1	Genbank	gene	6782	7339	.	+	.	ID=gene-AO052_06970;Name=AO052_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06970
LNKO01000094.1	Protein Homology	CDS	6782	7339	.	+	0	ID=cds-TMQ37933.1;Parent=gene-AO052_06970;Dbxref=NCBI_GP:TMQ37933.1;Name=TMQ37933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660985.1;locus_tag=AO052_06970;product=urease accessory protein UreE;protein_id=TMQ37933.1;transl_table=11
LNKO01000094.1	Genbank	gene	7324	8031	.	+	.	ID=gene-AO052_06975;Name=AO052_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06975
LNKO01000094.1	Protein Homology	CDS	7324	8031	.	+	0	ID=cds-TMQ37934.1;Parent=gene-AO052_06975;Dbxref=NCBI_GP:TMQ37934.1;Name=TMQ37934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN11.1;locus_tag=AO052_06975;product=urease accessory protein UreF;protein_id=TMQ37934.1;transl_table=11
LNKO01000094.1	Genbank	gene	8177	8812	.	+	.	ID=gene-AO052_06980;Name=AO052_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06980
LNKO01000094.1	Protein Homology	CDS	8177	8812	.	+	0	ID=cds-TMQ37935.1;Parent=gene-AO052_06980;Dbxref=NCBI_GP:TMQ37935.1;Name=TMQ37935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687034.1;locus_tag=AO052_06980;product=urease accessory protein UreG;protein_id=TMQ37935.1;transl_table=11
LNKO01000094.1	Genbank	gene	8887	9702	.	+	.	ID=gene-AO052_06985;Name=AO052_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06985
LNKO01000094.1	Protein Homology	CDS	8887	9702	.	+	0	ID=cds-TMQ37936.1;Parent=gene-AO052_06985;Dbxref=NCBI_GP:TMQ37936.1;Name=TMQ37936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526409.1;locus_tag=AO052_06985;product=urease accessory protein UreD;protein_id=TMQ37936.1;transl_table=11
LNKO01000094.1	Genbank	gene	9858	11276	.	+	.	ID=gene-AO052_06990;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AO052_06990
LNKO01000094.1	Protein Homology	CDS	9858	11276	.	+	0	ID=cds-TMQ37937.1;Parent=gene-AO052_06990;Dbxref=NCBI_GP:TMQ37937.1;Name=TMQ37937.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44324.1;locus_tag=AO052_06990;product=class II fumarate hydratase;protein_id=TMQ37937.1;transl_table=11
LNKO01000094.1	Genbank	gene	11580	13469	.	-	.	ID=gene-AO052_06995;Name=AO052_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_06995
LNKO01000094.1	Protein Homology	CDS	11580	13469	.	-	0	ID=cds-TMQ37938.1;Parent=gene-AO052_06995;Dbxref=NCBI_GP:TMQ37938.1;Name=TMQ37938.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527409.1;locus_tag=AO052_06995;product=RNA polymerase subunit sigma;protein_id=TMQ37938.1;transl_table=11
LNKO01000094.1	Genbank	gene	13539	15320	.	-	.	ID=gene-AO052_07000;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AO052_07000
LNKO01000094.1	Protein Homology	CDS	13539	15320	.	-	0	ID=cds-TMQ37939.1;Parent=gene-AO052_07000;Dbxref=NCBI_GP:TMQ37939.1;Name=TMQ37939.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701718.1;locus_tag=AO052_07000;product=DNA primase;protein_id=TMQ37939.1;transl_table=11
LNKO01000094.1	Genbank	gene	15454	15669	.	-	.	ID=gene-AO052_07005;Name=AO052_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07005
LNKO01000094.1	Protein Homology	CDS	15454	15669	.	-	0	ID=cds-TMQ37940.1;Parent=gene-AO052_07005;Dbxref=NCBI_GP:TMQ37940.1;Name=TMQ37940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VM96.1;locus_tag=AO052_07005;product=30S ribosomal protein S21;protein_id=TMQ37940.1;transl_table=11
LNKO01000094.1	Genbank	gene	15901	16929	.	+	.	ID=gene-AO052_07010;Name=AO052_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07010
LNKO01000094.1	Protein Homology	CDS	15901	16929	.	+	0	ID=cds-TMQ37941.1;Parent=gene-AO052_07010;Dbxref=NCBI_GP:TMQ37941.1;Name=TMQ37941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526412.1;locus_tag=AO052_07010;product=tRNA threonylcarbamoyl adenosine modification protein TsaD;protein_id=TMQ37941.1;transl_table=11
LNKO01000094.1	Genbank	gene	16953	17963	.	+	.	ID=gene-AO052_07015;Name=AO052_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07015
LNKO01000094.1	Protein Homology	CDS	16953	17963	.	+	0	ID=cds-TMQ37942.1;Parent=gene-AO052_07015;Dbxref=NCBI_GP:TMQ37942.1;Name=TMQ37942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526413.1;locus_tag=AO052_07015;product=adenine methyltransferase;protein_id=TMQ37942.1;transl_table=11
LNKO01000094.1	Genbank	gene	17966	18871	.	+	.	ID=gene-AO052_07020;Name=AO052_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07020
LNKO01000094.1	Protein Homology	CDS	17966	18871	.	+	0	ID=cds-TMQ37946.1;Parent=gene-AO052_07020;Dbxref=NCBI_GP:TMQ37946.1;Name=TMQ37946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526414.1;locus_tag=AO052_07020;product=DNA adenine methylase;protein_id=TMQ37946.1;transl_table=11
LNKO01000094.1	Genbank	gene	18884	20665	.	+	.	ID=gene-AO052_07025;Name=AO052_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07025
LNKO01000094.1	Protein Homology	CDS	18884	20665	.	+	0	ID=cds-TMQ37943.1;Parent=gene-AO052_07025;Dbxref=NCBI_GP:TMQ37943.1;Name=TMQ37943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015543633.1;locus_tag=AO052_07025;product=hypothetical protein;protein_id=TMQ37943.1;transl_table=11
LNKO01000094.1	Genbank	gene	20666	21068	.	+	.	ID=gene-AO052_07030;Name=AO052_07030;end_range=21068,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07030;partial=true
LNKO01000094.1	Protein Homology	CDS	20666	21068	.	+	0	ID=cds-TMQ37944.1;Parent=gene-AO052_07030;Dbxref=NCBI_GP:TMQ37944.1;Name=TMQ37944.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;end_range=21068,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526416.1;locus_tag=AO052_07030;partial=true;product=thymidine kinase;protein_id=TMQ37944.1;transl_table=11
##sequence-region LNKO01000095.1 1 25328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000095.1	Genbank	region	1	25328	.	+	.	ID=LNKO01000095.1:1..25328;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000095.1	Genbank	pseudogene	1	177	.	+	.	ID=gene-AO052_07035;Name=AO052_07035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07035;pseudo=true
LNKO01000095.1	Protein Homology	CDS	1	177	.	+	0	ID=cds-AO052_07035;Parent=gene-AO052_07035;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010868998.1;locus_tag=AO052_07035;pseudo=true;transl_table=11
LNKO01000095.1	Genbank	gene	214	1434	.	+	.	ID=gene-AO052_07040;Name=AO052_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07040
LNKO01000095.1	Protein Homology	CDS	214	1434	.	+	0	ID=cds-TMQ37884.1;Parent=gene-AO052_07040;Dbxref=NCBI_GP:TMQ37884.1;Name=TMQ37884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995196.1;locus_tag=AO052_07040;product=tyrosine transporter;protein_id=TMQ37884.1;transl_table=11
LNKO01000095.1	Genbank	gene	1572	1832	.	-	.	ID=gene-AO052_07045;Name=AO052_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07045
LNKO01000095.1	Protein Homology	CDS	1572	1832	.	-	0	ID=cds-TMQ37885.1;Parent=gene-AO052_07045;Dbxref=NCBI_GP:TMQ37885.1;Name=TMQ37885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064693.1;locus_tag=AO052_07045;product=ferredoxin;protein_id=TMQ37885.1;transl_table=11
LNKO01000095.1	Genbank	gene	1910	2704	.	+	.	ID=gene-AO052_07050;Name=AO052_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07050
LNKO01000095.1	Protein Homology	CDS	1910	2704	.	+	0	ID=cds-TMQ37886.1;Parent=gene-AO052_07050;Dbxref=NCBI_GP:TMQ37886.1;Name=TMQ37886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995195.1;locus_tag=AO052_07050;product=ribonuclease HI;protein_id=TMQ37886.1;transl_table=11
LNKO01000095.1	Genbank	gene	2800	3960	.	+	.	ID=gene-AO052_07055;Name=AO052_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07055
LNKO01000095.1	Protein Homology	CDS	2800	3960	.	+	0	ID=cds-TMQ37887.1;Parent=gene-AO052_07055;Dbxref=NCBI_GP:TMQ37887.1;Name=TMQ37887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658010.1;locus_tag=AO052_07055;product=phosphoglycerate kinase;protein_id=TMQ37887.1;transl_table=11
LNKO01000095.1	Genbank	gene	4070	5149	.	+	.	ID=gene-AO052_07060;Name=AO052_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07060
LNKO01000095.1	Protein Homology	CDS	4070	5149	.	+	0	ID=cds-TMQ37888.1;Parent=gene-AO052_07060;Dbxref=NCBI_GP:TMQ37888.1;Name=TMQ37888.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702948.1;locus_tag=AO052_07060;product=class II fructose-bisphosphate aldolase;protein_id=TMQ37888.1;transl_table=11
LNKO01000095.1	Genbank	gene	5216	6256	.	+	.	ID=gene-AO052_07065;Name=AO052_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07065
LNKO01000095.1	Protein Homology	CDS	5216	6256	.	+	0	ID=cds-TMQ37889.1;Parent=gene-AO052_07065;Dbxref=NCBI_GP:TMQ37889.1;Name=TMQ37889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692075.1;locus_tag=AO052_07065;product=hypothetical protein;protein_id=TMQ37889.1;transl_table=11
LNKO01000095.1	Genbank	gene	6212	6868	.	-	.	ID=gene-AO052_07070;Name=AO052_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07070
LNKO01000095.1	Protein Homology	CDS	6212	6868	.	-	0	ID=cds-TMQ37890.1;Parent=gene-AO052_07070;Dbxref=NCBI_GP:TMQ37890.1;Name=TMQ37890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649480.1;locus_tag=AO052_07070;product=hypothetical protein;protein_id=TMQ37890.1;transl_table=11
LNKO01000095.1	Genbank	gene	7081	8625	.	+	.	ID=gene-AO052_07075;Name=AO052_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07075
LNKO01000095.1	Protein Homology	CDS	7081	8625	.	+	0	ID=cds-TMQ37891.1;Parent=gene-AO052_07075;Dbxref=NCBI_GP:TMQ37891.1;Name=TMQ37891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643931.1;locus_tag=AO052_07075;product=hypothetical protein;protein_id=TMQ37891.1;transl_table=11
LNKO01000095.1	Genbank	gene	8634	9422	.	+	.	ID=gene-AO052_07080;Name=AO052_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07080
LNKO01000095.1	Protein Homology	CDS	8634	9422	.	+	0	ID=cds-TMQ37892.1;Parent=gene-AO052_07080;Dbxref=NCBI_GP:TMQ37892.1;Name=TMQ37892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995191.1;locus_tag=AO052_07080;product=radical SAM protein;protein_id=TMQ37892.1;transl_table=11
LNKO01000095.1	Genbank	gene	9521	10774	.	+	.	ID=gene-AO052_07085;Name=AO052_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07085
LNKO01000095.1	Protein Homology	CDS	9521	10774	.	+	0	ID=cds-TMQ37893.1;Parent=gene-AO052_07085;Dbxref=NCBI_GP:TMQ37893.1;Name=TMQ37893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526424.1;locus_tag=AO052_07085;product=nucleoside transporter NupC;protein_id=TMQ37893.1;transl_table=11
LNKO01000095.1	Genbank	gene	10858	11574	.	+	.	ID=gene-AO052_07090;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AO052_07090
LNKO01000095.1	Protein Homology	CDS	10858	11574	.	+	0	ID=cds-TMQ37894.1;Parent=gene-AO052_07090;Dbxref=NCBI_GP:TMQ37894.1;Name=TMQ37894.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701710.1;locus_tag=AO052_07090;product=purine nucleoside phosphorylase;protein_id=TMQ37894.1;transl_table=11
LNKO01000095.1	Genbank	gene	11746	12174	.	+	.	ID=gene-AO052_07095;Name=AO052_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07095
LNKO01000095.1	Protein Homology	CDS	11746	12174	.	+	0	ID=cds-TMQ37895.1;Parent=gene-AO052_07095;Dbxref=NCBI_GP:TMQ37895.1;Name=TMQ37895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005763439.1;locus_tag=AO052_07095;product=50S ribosomal protein L11;protein_id=TMQ37895.1;transl_table=11
LNKO01000095.1	Genbank	gene	12179	12868	.	+	.	ID=gene-AO052_07100;Name=AO052_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07100
LNKO01000095.1	Protein Homology	CDS	12179	12868	.	+	0	ID=cds-TMQ37896.1;Parent=gene-AO052_07100;Dbxref=NCBI_GP:TMQ37896.1;Name=TMQ37896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356869.1;locus_tag=AO052_07100;product=50S ribosomal protein L1;protein_id=TMQ37896.1;transl_table=11
LNKO01000095.1	Genbank	gene	13251	17282	.	+	.	ID=gene-AO052_07105;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AO052_07105
LNKO01000095.1	Protein Homology	CDS	13251	17282	.	+	0	ID=cds-TMQ37897.1;Parent=gene-AO052_07105;Dbxref=NCBI_GP:TMQ37897.1;Name=TMQ37897.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43738.1;locus_tag=AO052_07105;product=DNA-directed RNA polymerase subunit beta;protein_id=TMQ37897.1;transl_table=11
LNKO01000095.1	Genbank	gene	17489	21739	.	+	.	ID=gene-AO052_07110;Name=AO052_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07110
LNKO01000095.1	Protein Homology	CDS	17489	21739	.	+	0	ID=cds-TMQ37898.1;Parent=gene-AO052_07110;Dbxref=NCBI_GP:TMQ37898.1;Name=TMQ37898.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526426.1;locus_tag=AO052_07110;product=DNA-directed RNA polymerase subunit beta';protein_id=TMQ37898.1;transl_table=11
LNKO01000095.1	Genbank	gene	21933	22877	.	+	.	ID=gene-AO052_07115;Name=AO052_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07115
LNKO01000095.1	Protein Homology	CDS	21933	22877	.	+	0	ID=cds-TMQ37899.1;Parent=gene-AO052_07115;Dbxref=NCBI_GP:TMQ37899.1;Name=TMQ37899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527415.1;locus_tag=AO052_07115;product=tellurite resistance protein TehA;protein_id=TMQ37899.1;transl_table=11
LNKO01000095.1	Genbank	gene	22930	23649	.	-	.	ID=gene-AO052_07120;Name=AO052_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07120
LNKO01000095.1	Protein Homology	CDS	22930	23649	.	-	0	ID=cds-TMQ37900.1;Parent=gene-AO052_07120;Dbxref=NCBI_GP:TMQ37900.1;Name=TMQ37900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500438.1;locus_tag=AO052_07120;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=TMQ37900.1;transl_table=11
LNKO01000095.1	Genbank	gene	23711	24622	.	+	.	ID=gene-AO052_07125;Name=AO052_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07125
LNKO01000095.1	Protein Homology	CDS	23711	24622	.	+	0	ID=cds-TMQ37901.1;Parent=gene-AO052_07125;Dbxref=NCBI_GP:TMQ37901.1;Name=TMQ37901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010868993.1;locus_tag=AO052_07125;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=TMQ37901.1;transl_table=11
LNKO01000095.1	Genbank	gene	24674	25162	.	+	.	ID=gene-AO052_07130;Name=AO052_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07130
LNKO01000095.1	Protein Homology	CDS	24674	25162	.	+	0	ID=cds-TMQ37902.1;Parent=gene-AO052_07130;Dbxref=NCBI_GP:TMQ37902.1;Name=TMQ37902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44738.1;locus_tag=AO052_07130;product=ribonuclease E activity regulator RraA;protein_id=TMQ37902.1;transl_table=11
##sequence-region LNKO01000096.1 1 12619
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000096.1	Genbank	region	1	12619	.	+	.	ID=LNKO01000096.1:1..12619;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000096.1	Genbank	gene	1	519	.	-	.	ID=gene-AO052_07135;Name=AO052_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07135;partial=true;start_range=.,1
LNKO01000096.1	Protein Homology	CDS	1	519	.	-	0	ID=cds-TMQ37820.1;Parent=gene-AO052_07135;Dbxref=NCBI_GP:TMQ37820.1;Name=TMQ37820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UH14.1;locus_tag=AO052_07135;partial=true;product=hypothetical protein;protein_id=TMQ37820.1;start_range=.,1;transl_table=11
LNKO01000096.1	Genbank	gene	625	1623	.	-	.	ID=gene-AO052_07140;Name=AO052_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07140
LNKO01000096.1	Protein Homology	CDS	625	1623	.	-	0	ID=cds-TMQ37821.1;Parent=gene-AO052_07140;Dbxref=NCBI_GP:TMQ37821.1;Name=TMQ37821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686992.1;locus_tag=AO052_07140;product=transcriptional regulator;protein_id=TMQ37821.1;transl_table=11
LNKO01000096.1	Genbank	gene	1651	2571	.	-	.	ID=gene-AO052_07145;Name=AO052_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07145
LNKO01000096.1	Protein Homology	CDS	1651	2571	.	-	0	ID=cds-TMQ37822.1;Parent=gene-AO052_07145;Dbxref=NCBI_GP:TMQ37822.1;Name=TMQ37822.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272090.1;locus_tag=AO052_07145;product=ribokinase;protein_id=TMQ37822.1;transl_table=11
LNKO01000096.1	Genbank	gene	2668	3546	.	-	.	ID=gene-AO052_07150;Name=AO052_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07150
LNKO01000096.1	Protein Homology	CDS	2668	3546	.	-	0	ID=cds-TMQ37823.1;Parent=gene-AO052_07150;Dbxref=NCBI_GP:TMQ37823.1;Name=TMQ37823.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995182.1;locus_tag=AO052_07150;product=D-ribose ABC transporter substrate-binding protein;protein_id=TMQ37823.1;transl_table=11
LNKO01000096.1	Genbank	gene	3566	4534	.	-	.	ID=gene-AO052_07155;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AO052_07155
LNKO01000096.1	Protein Homology	CDS	3566	4534	.	-	0	ID=cds-TMQ37824.1;Parent=gene-AO052_07155;Dbxref=NCBI_GP:TMQ37824.1;Name=TMQ37824.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629198.1;locus_tag=AO052_07155;product=ribose ABC transporter permease;protein_id=TMQ37824.1;transl_table=11
LNKO01000096.1	Genbank	gene	4550	6031	.	-	.	ID=gene-AO052_07160;Name=AO052_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07160
LNKO01000096.1	Protein Homology	CDS	4550	6031	.	-	0	ID=cds-TMQ37825.1;Parent=gene-AO052_07160;Dbxref=NCBI_GP:TMQ37825.1;Name=TMQ37825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686985.1;locus_tag=AO052_07160;product=sugar ABC transporter ATP-binding protein;protein_id=TMQ37825.1;transl_table=11
LNKO01000096.1	Genbank	gene	6045	6464	.	-	.	ID=gene-AO052_07165;Name=AO052_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07165
LNKO01000096.1	Protein Homology	CDS	6045	6464	.	-	0	ID=cds-TMQ37826.1;Parent=gene-AO052_07165;Dbxref=NCBI_GP:TMQ37826.1;Name=TMQ37826.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666439.1;locus_tag=AO052_07165;product=D-ribose pyranase;protein_id=TMQ37826.1;transl_table=11
LNKO01000096.1	Genbank	gene	6626	8068	.	-	.	ID=gene-AO052_07170;Name=AO052_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07170
LNKO01000096.1	Protein Homology	CDS	6626	8068	.	-	0	ID=cds-TMQ37827.1;Parent=gene-AO052_07170;Dbxref=NCBI_GP:TMQ37827.1;Name=TMQ37827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649434.1;locus_tag=AO052_07170;product=recombinase RmuC;protein_id=TMQ37827.1;transl_table=11
LNKO01000096.1	Genbank	gene	8232	9527	.	-	.	ID=gene-AO052_07175;Name=AO052_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07175
LNKO01000096.1	Protein Homology	CDS	8232	9527	.	-	0	ID=cds-TMQ37828.1;Parent=gene-AO052_07175;Dbxref=NCBI_GP:TMQ37828.1;Name=TMQ37828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629403.1;locus_tag=AO052_07175;product=oxidoreductase;protein_id=TMQ37828.1;transl_table=11
LNKO01000096.1	Genbank	gene	9668	10720	.	+	.	ID=gene-AO052_07180;Name=AO052_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07180
LNKO01000096.1	Protein Homology	CDS	9668	10720	.	+	0	ID=cds-TMQ37829.1;Parent=gene-AO052_07180;Dbxref=NCBI_GP:TMQ37829.1;Name=TMQ37829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659745.1;locus_tag=AO052_07180;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=TMQ37829.1;transl_table=11
LNKO01000096.1	Genbank	gene	10790	12124	.	-	.	ID=gene-AO052_07185;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AO052_07185
LNKO01000096.1	Protein Homology	CDS	10790	12124	.	-	0	ID=cds-TMQ37830.1;Parent=gene-AO052_07185;Dbxref=NCBI_GP:TMQ37830.1;Name=TMQ37830.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693677.1;locus_tag=AO052_07185;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=TMQ37830.1;transl_table=11
LNKO01000096.1	Genbank	gene	12135	12619	.	-	.	ID=gene-AO052_07190;Name=AO052_07190;end_range=12619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07190;partial=true
LNKO01000096.1	Protein Homology	CDS	12135	12619	.	-	2	ID=cds-TMQ37831.1;Parent=gene-AO052_07190;Dbxref=NCBI_GP:TMQ37831.1;Name=TMQ37831.1;end_range=12619,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538653.1;locus_tag=AO052_07190;partial=true;product=ATP-dependent protease subunit HslV;protein_id=TMQ37831.1;transl_table=11
##sequence-region LNKO01000097.1 1 15412
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000097.1	Genbank	region	1	15412	.	+	.	ID=LNKO01000097.1:1..15412;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000097.1	Genbank	gene	264	971	.	+	.	ID=gene-AO052_07195;Name=AO052_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07195
LNKO01000097.1	Protein Homology	CDS	264	971	.	+	0	ID=cds-TMQ37789.1;Parent=gene-AO052_07195;Dbxref=NCBI_GP:TMQ37789.1;Name=TMQ37789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527420.1;locus_tag=AO052_07195;product=acid phosphatase;protein_id=TMQ37789.1;transl_table=11
LNKO01000097.1	Genbank	gene	1063	1278	.	-	.	ID=gene-AO052_07200;Name=AO052_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07200
LNKO01000097.1	Protein Homology	CDS	1063	1278	.	-	0	ID=cds-TMQ37807.1;Parent=gene-AO052_07200;Dbxref=NCBI_GP:TMQ37807.1;Name=TMQ37807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656553.1;locus_tag=AO052_07200;product=S-ribosylhomocysteinase;protein_id=TMQ37807.1;transl_table=11
LNKO01000097.1	Genbank	gene	1416	1673	.	-	.	ID=gene-AO052_07205;Name=AO052_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07205
LNKO01000097.1	Protein Homology	CDS	1416	1673	.	-	0	ID=cds-TMQ37808.1;Parent=gene-AO052_07205;Dbxref=NCBI_GP:TMQ37808.1;Name=TMQ37808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691324.1;locus_tag=AO052_07205;product=acid phosphatase;protein_id=TMQ37808.1;transl_table=11
LNKO01000097.1	Genbank	gene	1917	2420	.	-	.	ID=gene-AO052_07210;Name=AO052_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07210
LNKO01000097.1	Protein Homology	CDS	1917	2420	.	-	0	ID=cds-TMQ37790.1;Parent=gene-AO052_07210;Dbxref=NCBI_GP:TMQ37790.1;Name=TMQ37790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5U9Z9.1;locus_tag=AO052_07210;product=S-ribosylhomocysteinase;protein_id=TMQ37790.1;transl_table=11
LNKO01000097.1	Genbank	gene	2605	3078	.	-	.	ID=gene-AO052_07215;Name=AO052_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07215
LNKO01000097.1	Protein Homology	CDS	2605	3078	.	-	0	ID=cds-TMQ37791.1;Parent=gene-AO052_07215;Dbxref=NCBI_GP:TMQ37791.1;Name=TMQ37791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666452.1;locus_tag=AO052_07215;product=hypothetical protein;protein_id=TMQ37791.1;transl_table=11
LNKO01000097.1	Genbank	gene	3078	3680	.	-	.	ID=gene-AO052_07220;Name=AO052_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07220
LNKO01000097.1	Protein Homology	CDS	3078	3680	.	-	0	ID=cds-TMQ37792.1;Parent=gene-AO052_07220;Dbxref=NCBI_GP:TMQ37792.1;Name=TMQ37792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688685.1;locus_tag=AO052_07220;product=hypothetical protein;protein_id=TMQ37792.1;transl_table=11
LNKO01000097.1	Genbank	gene	3796	4173	.	+	.	ID=gene-AO052_07225;Name=AO052_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07225
LNKO01000097.1	Protein Homology	CDS	3796	4173	.	+	0	ID=cds-TMQ37793.1;Parent=gene-AO052_07225;Dbxref=NCBI_GP:TMQ37793.1;Name=TMQ37793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691328.1;locus_tag=AO052_07225;product=hypothetical protein;protein_id=TMQ37793.1;transl_table=11
LNKO01000097.1	Genbank	gene	4313	4924	.	+	.	ID=gene-AO052_07230;Name=AO052_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07230
LNKO01000097.1	Protein Homology	CDS	4313	4924	.	+	0	ID=cds-TMQ37794.1;Parent=gene-AO052_07230;Dbxref=NCBI_GP:TMQ37794.1;Name=TMQ37794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669355.1;locus_tag=AO052_07230;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=TMQ37794.1;transl_table=11
LNKO01000097.1	Genbank	gene	5050	5424	.	+	.	ID=gene-AO052_07235;Name=AO052_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07235
LNKO01000097.1	Protein Homology	CDS	5050	5424	.	+	0	ID=cds-TMQ37795.1;Parent=gene-AO052_07235;Dbxref=NCBI_GP:TMQ37795.1;Name=TMQ37795.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662542.1;locus_tag=AO052_07235;product=ATP F0F1 synthase subunit I;protein_id=TMQ37795.1;transl_table=11
LNKO01000097.1	Genbank	gene	5461	6249	.	+	.	ID=gene-AO052_07240;Name=AO052_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07240
LNKO01000097.1	Protein Homology	CDS	5461	6249	.	+	0	ID=cds-TMQ37796.1;Parent=gene-AO052_07240;Dbxref=NCBI_GP:TMQ37796.1;Name=TMQ37796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA05.1;locus_tag=AO052_07240;product=ATP synthase F0F1 subunit A;protein_id=TMQ37796.1;transl_table=11
LNKO01000097.1	Genbank	gene	6305	6559	.	+	.	ID=gene-AO052_07245;Name=AO052_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07245
LNKO01000097.1	Protein Homology	CDS	6305	6559	.	+	0	ID=cds-TMQ37797.1;Parent=gene-AO052_07245;Dbxref=NCBI_GP:TMQ37797.1;Name=TMQ37797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA06.1;locus_tag=AO052_07245;product=ATP synthase subunit C;protein_id=TMQ37797.1;transl_table=11
LNKO01000097.1	Genbank	gene	6609	7079	.	+	.	ID=gene-AO052_07250;Name=AO052_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07250
LNKO01000097.1	Protein Homology	CDS	6609	7079	.	+	0	ID=cds-TMQ37798.1;Parent=gene-AO052_07250;Dbxref=NCBI_GP:TMQ37798.1;Name=TMQ37798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA07.1;locus_tag=AO052_07250;product=ATP synthase subunit B;protein_id=TMQ37798.1;transl_table=11
LNKO01000097.1	Genbank	gene	7092	7625	.	+	.	ID=gene-AO052_07255;Name=AO052_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07255
LNKO01000097.1	Protein Homology	CDS	7092	7625	.	+	0	ID=cds-TMQ37799.1;Parent=gene-AO052_07255;Dbxref=NCBI_GP:TMQ37799.1;Name=TMQ37799.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064468.1;locus_tag=AO052_07255;product=ATP F0F1 synthase subunit delta;protein_id=TMQ37799.1;transl_table=11
LNKO01000097.1	Genbank	gene	7638	9179	.	+	.	ID=gene-AO052_07260;Name=AO052_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07260
LNKO01000097.1	Protein Homology	CDS	7638	9179	.	+	0	ID=cds-TMQ37800.1;Parent=gene-AO052_07260;Dbxref=NCBI_GP:TMQ37800.1;Name=TMQ37800.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN62.1;locus_tag=AO052_07260;product=ATP synthase subunit alpha;protein_id=TMQ37800.1;transl_table=11
LNKO01000097.1	Genbank	gene	9195	10064	.	+	.	ID=gene-AO052_07265;Name=AO052_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07265
LNKO01000097.1	Protein Homology	CDS	9195	10064	.	+	0	ID=cds-TMQ37801.1;Parent=gene-AO052_07265;Dbxref=NCBI_GP:TMQ37801.1;Name=TMQ37801.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995166.1;locus_tag=AO052_07265;product=ATP F0F1 synthase subunit gamma;protein_id=TMQ37801.1;transl_table=11
LNKO01000097.1	Genbank	gene	10081	11454	.	+	.	ID=gene-AO052_07270;Name=AO052_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07270
LNKO01000097.1	Protein Homology	CDS	10081	11454	.	+	0	ID=cds-TMQ37802.1;Parent=gene-AO052_07270;Dbxref=NCBI_GP:TMQ37802.1;Name=TMQ37802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632228.1;locus_tag=AO052_07270;product=ATP synthase subunit beta;protein_id=TMQ37802.1;transl_table=11
LNKO01000097.1	Genbank	gene	11484	11912	.	+	.	ID=gene-AO052_07275;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AO052_07275
LNKO01000097.1	Protein Homology	CDS	11484	11912	.	+	0	ID=cds-TMQ37803.1;Parent=gene-AO052_07275;Dbxref=NCBI_GP:TMQ37803.1;Name=TMQ37803.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;inference=EXISTENCE: similar to AA sequence:SwissProt:P43718.1;locus_tag=AO052_07275;product=ATP synthase F0F1 subunit epsilon;protein_id=TMQ37803.1;transl_table=11
LNKO01000097.1	Genbank	gene	12098	13300	.	-	.	ID=gene-AO052_07280;Name=AO052_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07280
LNKO01000097.1	Protein Homology	CDS	12098	13300	.	-	0	ID=cds-TMQ37804.1;Parent=gene-AO052_07280;Dbxref=NCBI_GP:TMQ37804.1;Name=TMQ37804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44727.1;locus_tag=AO052_07280;product=tyrosine transporter;protein_id=TMQ37804.1;transl_table=11
LNKO01000097.1	Genbank	gene	13564	14229	.	-	.	ID=gene-AO052_07285;Name=AO052_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07285
LNKO01000097.1	Protein Homology	CDS	13564	14229	.	-	0	ID=cds-TMQ37805.1;Parent=gene-AO052_07285;Dbxref=NCBI_GP:TMQ37805.1;Name=TMQ37805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44434.1;locus_tag=AO052_07285;product=phosphoribosyl-ATP pyrophosphatase;protein_id=TMQ37805.1;transl_table=11
LNKO01000097.1	Genbank	gene	14229	15005	.	-	.	ID=gene-AO052_07290;Name=AO052_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07290
LNKO01000097.1	Protein Homology	CDS	14229	15005	.	-	0	ID=cds-TMQ37806.1;Parent=gene-AO052_07290;Dbxref=NCBI_GP:TMQ37806.1;Name=TMQ37806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691335.1;locus_tag=AO052_07290;product=imidazole glycerol phosphate synthase cyclase subunit;protein_id=TMQ37806.1;transl_table=11
LNKO01000097.1	Genbank	pseudogene	14987	15412	.	-	.	ID=gene-AO052_07295;Name=AO052_07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07295;pseudo=true
LNKO01000097.1	Protein Homology	CDS	14987	15412	.	-	0	ID=cds-AO052_07295;Parent=gene-AO052_07295;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995165.1;locus_tag=AO052_07295;pseudo=true;transl_table=11
##sequence-region LNKO01000098.1 1 104041
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000098.1	Genbank	region	1	104041	.	+	.	ID=LNKO01000098.1:1..104041;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000098.1	Genbank	pseudogene	1	324	.	-	.	ID=gene-AO052_07300;Name=AO052_07300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07300;pseudo=true
LNKO01000098.1	Protein Homology	CDS	1	324	.	-	0	ID=cds-AO052_07300;Parent=gene-AO052_07300;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995165.1;locus_tag=AO052_07300;pseudo=true;transl_table=11
LNKO01000098.1	Genbank	gene	360	959	.	-	.	ID=gene-AO052_07305;Name=AO052_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07305
LNKO01000098.1	Protein Homology	CDS	360	959	.	-	0	ID=cds-TMQ37640.1;Parent=gene-AO052_07305;Dbxref=NCBI_GP:TMQ37640.1;Name=TMQ37640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44340.1;locus_tag=AO052_07305;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=TMQ37640.1;transl_table=11
LNKO01000098.1	Genbank	gene	1025	2113	.	-	.	ID=gene-AO052_07310;Name=AO052_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07310
LNKO01000098.1	Protein Homology	CDS	1025	2113	.	-	0	ID=cds-TMQ37641.1;Parent=gene-AO052_07310;Dbxref=NCBI_GP:TMQ37641.1;Name=TMQ37641.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995163.1;locus_tag=AO052_07310;product=imidazoleglycerol-phosphate dehydratase;protein_id=TMQ37641.1;transl_table=11
LNKO01000098.1	Genbank	gene	2225	3283	.	-	.	ID=gene-AO052_07315;Name=AO052_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07315
LNKO01000098.1	Protein Homology	CDS	2225	3283	.	-	0	ID=cds-TMQ37642.1;Parent=gene-AO052_07315;Dbxref=NCBI_GP:TMQ37642.1;Name=TMQ37642.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701691.1;locus_tag=AO052_07315;product=histidinol-phosphate aminotransferase;protein_id=TMQ37642.1;transl_table=11
LNKO01000098.1	Genbank	gene	3397	4680	.	-	.	ID=gene-AO052_07320;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AO052_07320
LNKO01000098.1	Protein Homology	CDS	3397	4680	.	-	0	ID=cds-TMQ37643.1;Parent=gene-AO052_07320;Dbxref=NCBI_GP:TMQ37643.1;Name=TMQ37643.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656530.1;locus_tag=AO052_07320;product=histidinol dehydrogenase;protein_id=TMQ37643.1;transl_table=11
LNKO01000098.1	Genbank	gene	4773	5684	.	-	.	ID=gene-AO052_07325;Name=AO052_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07325
LNKO01000098.1	Protein Homology	CDS	4773	5684	.	-	0	ID=cds-TMQ37644.1;Parent=gene-AO052_07325;Dbxref=NCBI_GP:TMQ37644.1;Name=TMQ37644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691345.1;locus_tag=AO052_07325;product=ATP phosphoribosyltransferase;protein_id=TMQ37644.1;transl_table=11
LNKO01000098.1	Genbank	gene	5847	6113	.	+	.	ID=gene-AO052_07330;Name=AO052_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07330
LNKO01000098.1	Protein Homology	CDS	5847	6113	.	+	0	ID=cds-TMQ37735.1;Parent=gene-AO052_07330;Dbxref=NCBI_GP:TMQ37735.1;Name=TMQ37735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055054.1;locus_tag=AO052_07330;product=hypothetical protein;protein_id=TMQ37735.1;transl_table=11
LNKO01000098.1	Genbank	gene	6132	6995	.	+	.	ID=gene-AO052_07335;Name=AO052_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07335
LNKO01000098.1	Protein Homology	CDS	6132	6995	.	+	0	ID=cds-TMQ37645.1;Parent=gene-AO052_07335;Dbxref=NCBI_GP:TMQ37645.1;Name=TMQ37645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272075.1;locus_tag=AO052_07335;product=hypothetical protein;protein_id=TMQ37645.1;transl_table=11
LNKO01000098.1	Genbank	gene	7005	7847	.	+	.	ID=gene-AO052_07340;Name=AO052_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07340
LNKO01000098.1	Protein Homology	CDS	7005	7847	.	+	0	ID=cds-TMQ37646.1;Parent=gene-AO052_07340;Dbxref=NCBI_GP:TMQ37646.1;Name=TMQ37646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652074.1;locus_tag=AO052_07340;product=hypothetical protein;protein_id=TMQ37646.1;transl_table=11
LNKO01000098.1	Genbank	gene	7891	9123	.	-	.	ID=gene-AO052_07345;Name=AO052_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07345
LNKO01000098.1	Protein Homology	CDS	7891	9123	.	-	0	ID=cds-TMQ37647.1;Parent=gene-AO052_07345;Dbxref=NCBI_GP:TMQ37647.1;Name=TMQ37647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43885.1;locus_tag=AO052_07345;product=D-3-phosphoglycerate dehydrogenase;protein_id=TMQ37647.1;transl_table=11
LNKO01000098.1	Genbank	gene	9153	9812	.	-	.	ID=gene-AO052_07350;Name=AO052_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07350
LNKO01000098.1	Protein Homology	CDS	9153	9812	.	-	0	ID=cds-TMQ37648.1;Parent=gene-AO052_07350;Dbxref=NCBI_GP:TMQ37648.1;Name=TMQ37648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526453.1;locus_tag=AO052_07350;product=ribose-5-phosphate isomerase;protein_id=TMQ37648.1;transl_table=11
LNKO01000098.1	Genbank	gene	9945	11096	.	-	.	ID=gene-AO052_07355;Name=AO052_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07355
LNKO01000098.1	Protein Homology	CDS	9945	11096	.	-	0	ID=cds-TMQ37649.1;Parent=gene-AO052_07355;Dbxref=NCBI_GP:TMQ37649.1;Name=TMQ37649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688712.1;locus_tag=AO052_07355;product=coproporphyrinogen III oxidase;protein_id=TMQ37649.1;transl_table=11
LNKO01000098.1	Genbank	gene	11212	13623	.	-	.	ID=gene-AO052_07360;Name=AO052_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07360
LNKO01000098.1	Protein Homology	CDS	11212	13623	.	-	0	ID=cds-TMQ37650.1;Parent=gene-AO052_07360;Dbxref=NCBI_GP:TMQ37650.1;Name=TMQ37650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550398.1;locus_tag=AO052_07360;product=DNA-binding protein;protein_id=TMQ37650.1;transl_table=11
LNKO01000098.1	Genbank	gene	13816	14691	.	+	.	ID=gene-AO052_07365;Name=AO052_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07365
LNKO01000098.1	Protein Homology	CDS	13816	14691	.	+	0	ID=cds-TMQ37651.1;Parent=gene-AO052_07365;Dbxref=NCBI_GP:TMQ37651.1;Name=TMQ37651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526456.1;locus_tag=AO052_07365;product=hypothetical protein;protein_id=TMQ37651.1;transl_table=11
LNKO01000098.1	Genbank	gene	14741	15532	.	-	.	ID=gene-AO052_07370;Name=AO052_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07370
LNKO01000098.1	Protein Homology	CDS	14741	15532	.	-	0	ID=cds-TMQ37652.1;Parent=gene-AO052_07370;Dbxref=NCBI_GP:TMQ37652.1;Name=TMQ37652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656509.1;locus_tag=AO052_07370;product=nucleoside triphosphate hydrolase;protein_id=TMQ37652.1;transl_table=11
LNKO01000098.1	Genbank	gene	15664	16203	.	+	.	ID=gene-AO052_07375;Name=AO052_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07375
LNKO01000098.1	Protein Homology	CDS	15664	16203	.	+	0	ID=cds-TMQ37653.1;Parent=gene-AO052_07375;Dbxref=NCBI_GP:TMQ37653.1;Name=TMQ37653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44722.1;locus_tag=AO052_07375;product=uracil phosphoribosyltransferase;protein_id=TMQ37653.1;transl_table=11
LNKO01000098.1	Genbank	gene	16279	17214	.	+	.	ID=gene-AO052_07380;Name=AO052_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07380
LNKO01000098.1	Protein Homology	CDS	16279	17214	.	+	0	ID=cds-TMQ37654.1;Parent=gene-AO052_07380;Dbxref=NCBI_GP:TMQ37654.1;Name=TMQ37654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961676.1;locus_tag=AO052_07380;product=peptidylprolyl isomerase;protein_id=TMQ37654.1;transl_table=11
LNKO01000098.1	Genbank	gene	17284	18327	.	+	.	ID=gene-AO052_07385;Name=AO052_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07385
LNKO01000098.1	Protein Homology	CDS	17284	18327	.	+	0	ID=cds-TMQ37655.1;Parent=gene-AO052_07385;Dbxref=NCBI_GP:TMQ37655.1;Name=TMQ37655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272066.1;locus_tag=AO052_07385;product=aminodeoxychorismate lyase;protein_id=TMQ37655.1;transl_table=11
LNKO01000098.1	Genbank	gene	18317	18976	.	+	.	ID=gene-AO052_07390;Name=AO052_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07390
LNKO01000098.1	Protein Homology	CDS	18317	18976	.	+	0	ID=cds-TMQ37656.1;Parent=gene-AO052_07390;Dbxref=NCBI_GP:TMQ37656.1;Name=TMQ37656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626134.1;locus_tag=AO052_07390;product=thymidylate kinase;protein_id=TMQ37656.1;transl_table=11
LNKO01000098.1	Genbank	gene	19153	21132	.	-	.	ID=gene-AO052_07395;Name=AO052_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07395
LNKO01000098.1	Protein Homology	CDS	19153	21132	.	-	0	ID=cds-TMQ37736.1;Parent=gene-AO052_07395;Dbxref=NCBI_GP:TMQ37736.1;Name=TMQ37736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995148.1;locus_tag=AO052_07395;product=autotransporter;protein_id=TMQ37736.1;transl_table=11
LNKO01000098.1	Genbank	gene	21458	22441	.	+	.	ID=gene-AO052_07400;Name=AO052_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07400
LNKO01000098.1	Protein Homology	CDS	21458	22441	.	+	0	ID=cds-TMQ37657.1;Parent=gene-AO052_07400;Dbxref=NCBI_GP:TMQ37657.1;Name=TMQ37657.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526461.1;locus_tag=AO052_07400;product=DNA polymerase III subunit delta';protein_id=TMQ37657.1;transl_table=11
LNKO01000098.1	Genbank	gene	22498	23280	.	+	.	ID=gene-AO052_07405;Name=AO052_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07405
LNKO01000098.1	Protein Homology	CDS	22498	23280	.	+	0	ID=cds-TMQ37658.1;Parent=gene-AO052_07405;Dbxref=NCBI_GP:TMQ37658.1;Name=TMQ37658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527430.1;locus_tag=AO052_07405;product=DNAse;protein_id=TMQ37658.1;transl_table=11
LNKO01000098.1	Genbank	gene	23307	23831	.	+	.	ID=gene-AO052_07410;Name=AO052_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07410
LNKO01000098.1	Protein Homology	CDS	23307	23831	.	+	0	ID=cds-TMQ37659.1;Parent=gene-AO052_07410;Dbxref=NCBI_GP:TMQ37659.1;Name=TMQ37659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701678.1;locus_tag=AO052_07410;product=hypothetical protein;protein_id=TMQ37659.1;transl_table=11
LNKO01000098.1	Genbank	gene	23882	25180	.	+	.	ID=gene-AO052_07415;Name=AO052_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07415
LNKO01000098.1	Protein Homology	CDS	23882	25180	.	+	0	ID=cds-TMQ37660.1;Parent=gene-AO052_07415;Dbxref=NCBI_GP:TMQ37660.1;Name=TMQ37660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686919.1;locus_tag=AO052_07415;product=hypothetical protein;protein_id=TMQ37660.1;transl_table=11
LNKO01000098.1	Genbank	gene	25253	25783	.	+	.	ID=gene-AO052_07420;Name=AO052_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07420
LNKO01000098.1	Protein Homology	CDS	25253	25783	.	+	0	ID=cds-TMQ37661.1;Parent=gene-AO052_07420;Dbxref=NCBI_GP:TMQ37661.1;Name=TMQ37661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526465.1;locus_tag=AO052_07420;product=hypothetical protein;protein_id=TMQ37661.1;transl_table=11
LNKO01000098.1	Genbank	gene	25855	27354	.	+	.	ID=gene-AO052_07425;Name=AO052_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07425
LNKO01000098.1	Protein Homology	CDS	25855	27354	.	+	0	ID=cds-TMQ37662.1;Parent=gene-AO052_07425;Dbxref=NCBI_GP:TMQ37662.1;Name=TMQ37662.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44715.1;locus_tag=AO052_07425;product=bifunctional PTS fructose transporter subunit IIA/HPr protein;protein_id=TMQ37662.1;transl_table=11
LNKO01000098.1	Genbank	gene	27356	28297	.	+	.	ID=gene-AO052_07430;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AO052_07430
LNKO01000098.1	Protein Homology	CDS	27356	28297	.	+	0	ID=cds-TMQ37663.1;Parent=gene-AO052_07430;Dbxref=NCBI_GP:TMQ37663.1;Name=TMQ37663.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=EXISTENCE: similar to AA sequence:SwissProt:P44330.1;locus_tag=AO052_07430;product=1-phosphofructokinase;protein_id=TMQ37663.1;transl_table=11
LNKO01000098.1	Genbank	gene	28299	29969	.	+	.	ID=gene-AO052_07435;Name=AO052_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07435
LNKO01000098.1	Protein Homology	CDS	28299	29969	.	+	0	ID=cds-TMQ37664.1;Parent=gene-AO052_07435;Dbxref=NCBI_GP:TMQ37664.1;Name=TMQ37664.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662586.1;locus_tag=AO052_07435;product=PTS fructose transporter subunit IIBC;protein_id=TMQ37664.1;transl_table=11
LNKO01000098.1	Genbank	gene	30396	30481	.	-	.	ID=gene-AO052_07440;Name=AO052_07440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_07440
LNKO01000098.1	tRNAscan-SE	tRNA	30396	30481	.	-	.	ID=rna-AO052_07440;Parent=gene-AO052_07440;anticodon=(pos:complement(30445..30447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07440;product=tRNA-Leu
LNKO01000098.1	tRNAscan-SE	exon	30396	30481	.	-	.	ID=exon-AO052_07440-1;Parent=rna-AO052_07440;anticodon=(pos:complement(30445..30447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07440;product=tRNA-Leu
LNKO01000098.1	Genbank	gene	30506	30847	.	-	.	ID=gene-AO052_07445;Name=AO052_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07445
LNKO01000098.1	Protein Homology	CDS	30506	30847	.	-	0	ID=cds-TMQ37665.1;Parent=gene-AO052_07445;Dbxref=NCBI_GP:TMQ37665.1;Name=TMQ37665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641246.1;locus_tag=AO052_07445;product=preprotein translocase subunit SecG;protein_id=TMQ37665.1;transl_table=11
LNKO01000098.1	Genbank	gene	30955	32910	.	-	.	ID=gene-AO052_07450;Name=AO052_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07450
LNKO01000098.1	Protein Homology	CDS	30955	32910	.	-	0	ID=cds-TMQ37666.1;Parent=gene-AO052_07450;Dbxref=NCBI_GP:TMQ37666.1;Name=TMQ37666.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691383.1;locus_tag=AO052_07450;product=DNA topoisomerase III;protein_id=TMQ37666.1;transl_table=11
LNKO01000098.1	Genbank	gene	32926	33528	.	-	.	ID=gene-AO052_07455;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AO052_07455
LNKO01000098.1	Protein Homology	CDS	32926	33528	.	-	0	ID=cds-TMQ37667.1;Parent=gene-AO052_07455;Dbxref=NCBI_GP:TMQ37667.1;Name=TMQ37667.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:SwissProt:P44712.1;locus_tag=AO052_07455;product=recombination protein RecR;protein_id=TMQ37667.1;transl_table=11
LNKO01000098.1	Genbank	gene	33659	33988	.	-	.	ID=gene-AO052_07460;Name=AO052_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07460
LNKO01000098.1	Protein Homology	CDS	33659	33988	.	-	0	ID=cds-TMQ37668.1;Parent=gene-AO052_07460;Dbxref=NCBI_GP:TMQ37668.1;Name=TMQ37668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8F5Q7.1;locus_tag=AO052_07460;product=hypothetical protein;protein_id=TMQ37668.1;transl_table=11
LNKO01000098.1	Genbank	gene	34140	34985	.	-	.	ID=gene-AO052_07465;Name=AO052_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07465
LNKO01000098.1	Protein Homology	CDS	34140	34985	.	-	0	ID=cds-TMQ37669.1;Parent=gene-AO052_07465;Dbxref=NCBI_GP:TMQ37669.1;Name=TMQ37669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995138.1;locus_tag=AO052_07465;product=rRNA methyltransferase;protein_id=TMQ37669.1;transl_table=11
LNKO01000098.1	Genbank	gene	35058	37658	.	-	.	ID=gene-AO052_07470;Name=AO052_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07470
LNKO01000098.1	Protein Homology	CDS	35058	37658	.	-	0	ID=cds-TMQ37670.1;Parent=gene-AO052_07470;Dbxref=NCBI_GP:TMQ37670.1;Name=TMQ37670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995137.1;locus_tag=AO052_07470;product=penicillin-binding protein;protein_id=TMQ37670.1;transl_table=11
LNKO01000098.1	Genbank	gene	37757	38554	.	+	.	ID=gene-AO052_07475;Name=AO052_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07475
LNKO01000098.1	Protein Homology	CDS	37757	38554	.	+	0	ID=cds-TMQ37671.1;Parent=gene-AO052_07475;Dbxref=NCBI_GP:TMQ37671.1;Name=TMQ37671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961684.1;locus_tag=AO052_07475;product=competence protein ComA;protein_id=TMQ37671.1;transl_table=11
LNKO01000098.1	Genbank	gene	38555	39061	.	+	.	ID=gene-AO052_07480;Name=AO052_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07480
LNKO01000098.1	Protein Homology	CDS	38555	39061	.	+	0	ID=cds-TMQ37672.1;Parent=gene-AO052_07480;Dbxref=NCBI_GP:TMQ37672.1;Name=TMQ37672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526474.1;locus_tag=AO052_07480;product=competence protein B;protein_id=TMQ37672.1;transl_table=11
LNKO01000098.1	Genbank	gene	39058	39579	.	+	.	ID=gene-AO052_07485;Name=AO052_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07485
LNKO01000098.1	Protein Homology	CDS	39058	39579	.	+	0	ID=cds-TMQ37673.1;Parent=gene-AO052_07485;Dbxref=NCBI_GP:TMQ37673.1;Name=TMQ37673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652122.1;locus_tag=AO052_07485;product=competence protein C;protein_id=TMQ37673.1;transl_table=11
LNKO01000098.1	Genbank	gene	39576	39989	.	+	.	ID=gene-AO052_07490;Name=AO052_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07490
LNKO01000098.1	Protein Homology	CDS	39576	39989	.	+	0	ID=cds-TMQ37674.1;Parent=gene-AO052_07490;Dbxref=NCBI_GP:TMQ37674.1;Name=TMQ37674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526476.1;locus_tag=AO052_07490;product=competence protein;protein_id=TMQ37674.1;transl_table=11
LNKO01000098.1	Genbank	gene	39999	41336	.	+	.	ID=gene-AO052_07495;Name=AO052_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07495
LNKO01000098.1	Protein Homology	CDS	39999	41336	.	+	0	ID=cds-TMQ37675.1;Parent=gene-AO052_07495;Dbxref=NCBI_GP:TMQ37675.1;Name=TMQ37675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P31772.2;locus_tag=AO052_07495;product=secretin;protein_id=TMQ37675.1;transl_table=11
LNKO01000098.1	Genbank	gene	41349	42035	.	+	.	ID=gene-AO052_07500;Name=AO052_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07500
LNKO01000098.1	Protein Homology	CDS	41349	42035	.	+	0	ID=cds-TMQ37676.1;Parent=gene-AO052_07500;Dbxref=NCBI_GP:TMQ37676.1;Name=TMQ37676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701645.1;locus_tag=AO052_07500;product=competence protein ComF;protein_id=TMQ37676.1;transl_table=11
LNKO01000098.1	Genbank	gene	42111	42707	.	+	.	ID=gene-AO052_07505;Name=AO052_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07505
LNKO01000098.1	Protein Homology	CDS	42111	42707	.	+	0	ID=cds-TMQ37677.1;Parent=gene-AO052_07505;Dbxref=NCBI_GP:TMQ37677.1;Name=TMQ37677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526479.1;locus_tag=AO052_07505;product=Fe/S biogenesis protein NfuA;protein_id=TMQ37677.1;transl_table=11
LNKO01000098.1	Genbank	gene	42774	43568	.	+	.	ID=gene-AO052_07510;Name=AO052_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07510
LNKO01000098.1	Protein Homology	CDS	42774	43568	.	+	0	ID=cds-TMQ37678.1;Parent=gene-AO052_07510;Dbxref=NCBI_GP:TMQ37678.1;Name=TMQ37678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526480.1;locus_tag=AO052_07510;product=NADH pyrophosphatase;protein_id=TMQ37678.1;transl_table=11
LNKO01000098.1	Genbank	gene	43604	44194	.	+	.	ID=gene-AO052_07515;Name=AO052_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07515
LNKO01000098.1	Protein Homology	CDS	43604	44194	.	+	0	ID=cds-TMQ37679.1;Parent=gene-AO052_07515;Dbxref=NCBI_GP:TMQ37679.1;Name=TMQ37679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649296.1;locus_tag=AO052_07515;product=hypothetical protein;protein_id=TMQ37679.1;transl_table=11
LNKO01000098.1	Genbank	gene	44334	44606	.	+	.	ID=gene-AO052_07520;Name=AO052_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07520
LNKO01000098.1	Protein Homology	CDS	44334	44606	.	+	0	ID=cds-TMQ37680.1;Parent=gene-AO052_07520;Dbxref=NCBI_GP:TMQ37680.1;Name=TMQ37680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355477.1;locus_tag=AO052_07520;product=DNA-binding protein;protein_id=TMQ37680.1;transl_table=11
LNKO01000098.1	Genbank	gene	44719	46551	.	+	.	ID=gene-AO052_07525;Name=AO052_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07525
LNKO01000098.1	Protein Homology	CDS	44719	46551	.	+	0	ID=cds-TMQ37681.1;Parent=gene-AO052_07525;Dbxref=NCBI_GP:TMQ37681.1;Name=TMQ37681.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355475.1;locus_tag=AO052_07525;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=TMQ37681.1;transl_table=11
LNKO01000098.1	Genbank	gene	46605	47138	.	-	.	ID=gene-AO052_07530;Name=AO052_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07530
LNKO01000098.1	Protein Homology	CDS	46605	47138	.	-	0	ID=cds-TMQ37682.1;Parent=gene-AO052_07530;Dbxref=NCBI_GP:TMQ37682.1;Name=TMQ37682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649288.1;locus_tag=AO052_07530;product=disulfide bond formation protein B;protein_id=TMQ37682.1;transl_table=11
LNKO01000098.1	Genbank	gene	47148	48692	.	-	.	ID=gene-AO052_07535;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AO052_07535
LNKO01000098.1	Protein Homology	CDS	47148	48692	.	-	0	ID=cds-TMQ37683.1;Parent=gene-AO052_07535;Dbxref=NCBI_GP:TMQ37683.1;Name=TMQ37683.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNB8.2;locus_tag=AO052_07535;product=sodium:proton antiporter;protein_id=TMQ37683.1;transl_table=11
LNKO01000098.1	Genbank	gene	48817	49542	.	+	.	ID=gene-AO052_07540;Name=AO052_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07540
LNKO01000098.1	Protein Homology	CDS	48817	49542	.	+	0	ID=cds-TMQ37684.1;Parent=gene-AO052_07540;Dbxref=NCBI_GP:TMQ37684.1;Name=TMQ37684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44705.1;locus_tag=AO052_07540;product=fatty acid metabolism transcriptional regulator FadR;protein_id=TMQ37684.1;transl_table=11
LNKO01000098.1	Genbank	gene	49588	50955	.	-	.	ID=gene-AO052_07545;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AO052_07545
LNKO01000098.1	Protein Homology	CDS	49588	50955	.	-	0	ID=cds-TMQ37685.1;Parent=gene-AO052_07545;Dbxref=NCBI_GP:TMQ37685.1;Name=TMQ37685.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44704.1;locus_tag=AO052_07545;product=phosphatidylserine synthase;protein_id=TMQ37685.1;transl_table=11
LNKO01000098.1	Genbank	gene	51102	52157	.	+	.	ID=gene-AO052_07550;Name=AO052_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07550
LNKO01000098.1	Protein Homology	CDS	51102	52157	.	+	0	ID=cds-TMQ37686.1;Parent=gene-AO052_07550;Dbxref=NCBI_GP:TMQ37686.1;Name=TMQ37686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526487.1;locus_tag=AO052_07550;product=rRNA methyltransferase;protein_id=TMQ37686.1;transl_table=11
LNKO01000098.1	Genbank	gene	52189	52887	.	-	.	ID=gene-AO052_07555;Name=AO052_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07555
LNKO01000098.1	Protein Homology	CDS	52189	52887	.	-	0	ID=cds-TMQ37687.1;Parent=gene-AO052_07555;Dbxref=NCBI_GP:TMQ37687.1;Name=TMQ37687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652144.1;locus_tag=AO052_07555;product=tRNA (adenine-N6)-methyltransferase;protein_id=TMQ37687.1;transl_table=11
LNKO01000098.1	Genbank	gene	52957	54276	.	+	.	ID=gene-AO052_07560;Name=AO052_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07560
LNKO01000098.1	Protein Homology	CDS	52957	54276	.	+	0	ID=cds-TMQ37688.1;Parent=gene-AO052_07560;Dbxref=NCBI_GP:TMQ37688.1;Name=TMQ37688.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44701.1;locus_tag=AO052_07560;product=ATP-dependent RNA helicase SrmB;protein_id=TMQ37688.1;transl_table=11
LNKO01000098.1	Genbank	gene	54449	55219	.	+	.	ID=gene-AO052_07565;Name=AO052_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07565
LNKO01000098.1	Protein Homology	CDS	54449	55219	.	+	0	ID=cds-TMQ37689.1;Parent=gene-AO052_07565;Dbxref=NCBI_GP:TMQ37689.1;Name=TMQ37689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055022.1;locus_tag=AO052_07565;product=hypothetical protein;protein_id=TMQ37689.1;transl_table=11
LNKO01000098.1	Genbank	gene	55365	55883	.	-	.	ID=gene-AO052_07570;Name=AO052_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07570
LNKO01000098.1	Protein Homology	CDS	55365	55883	.	-	0	ID=cds-TMQ37690.1;Parent=gene-AO052_07570;Dbxref=NCBI_GP:TMQ37690.1;Name=TMQ37690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055021.1;locus_tag=AO052_07570;product=GCN5 family acetyltransferase;protein_id=TMQ37690.1;transl_table=11
LNKO01000098.1	Genbank	gene	55873	56172	.	-	.	ID=gene-AO052_07575;Name=AO052_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07575
LNKO01000098.1	Protein Homology	CDS	55873	56172	.	-	0	ID=cds-TMQ37691.1;Parent=gene-AO052_07575;Dbxref=NCBI_GP:TMQ37691.1;Name=TMQ37691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995116.1;locus_tag=AO052_07575;product=hypothetical protein;protein_id=TMQ37691.1;transl_table=11
LNKO01000098.1	Genbank	gene	56437	57819	.	-	.	ID=gene-AO052_07580;Name=AO052_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07580
LNKO01000098.1	Protein Homology	CDS	56437	57819	.	-	0	ID=cds-TMQ37692.1;Parent=gene-AO052_07580;Dbxref=NCBI_GP:TMQ37692.1;Name=TMQ37692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44700.1;locus_tag=AO052_07580;product=protease;protein_id=TMQ37692.1;transl_table=11
LNKO01000098.1	Genbank	gene	57988	59331	.	-	.	ID=gene-AO052_07585;Name=AO052_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07585
LNKO01000098.1	Protein Homology	CDS	57988	59331	.	-	0	ID=cds-TMQ37693.1;Parent=gene-AO052_07585;Dbxref=NCBI_GP:TMQ37693.1;Name=TMQ37693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527444.1;locus_tag=AO052_07585;product=metabolite transport protein;protein_id=TMQ37693.1;transl_table=11
LNKO01000098.1	Genbank	gene	59276	59956	.	-	.	ID=gene-AO052_07590;Name=AO052_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07590
LNKO01000098.1	Protein Homology	CDS	59276	59956	.	-	0	ID=cds-TMQ37694.1;Parent=gene-AO052_07590;Dbxref=NCBI_GP:TMQ37694.1;Name=TMQ37694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701633.1;locus_tag=AO052_07590;product=thiamine-phosphate pyrophosphorylase;protein_id=TMQ37694.1;transl_table=11
LNKO01000098.1	Genbank	gene	59967	60776	.	-	.	ID=gene-AO052_07595;Name=AO052_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07595
LNKO01000098.1	Protein Homology	CDS	59967	60776	.	-	0	ID=cds-TMQ37695.1;Parent=gene-AO052_07595;Dbxref=NCBI_GP:TMQ37695.1;Name=TMQ37695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550422.1;locus_tag=AO052_07595;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=TMQ37695.1;transl_table=11
LNKO01000098.1	Genbank	gene	60769	61560	.	-	.	ID=gene-AO052_07600;Name=AO052_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07600
LNKO01000098.1	Protein Homology	CDS	60769	61560	.	-	0	ID=cds-TMQ37696.1;Parent=gene-AO052_07600;Dbxref=NCBI_GP:TMQ37696.1;Name=TMQ37696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGS9.1;locus_tag=AO052_07600;product=hydroxyethylthiazole kinase;protein_id=TMQ37696.1;transl_table=11
LNKO01000098.1	Genbank	gene	61886	62647	.	-	.	ID=gene-AO052_07605;Name=AO052_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07605
LNKO01000098.1	Protein Homology	CDS	61886	62647	.	-	0	ID=cds-TMQ37697.1;Parent=gene-AO052_07605;Dbxref=NCBI_GP:TMQ37697.1;Name=TMQ37697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526496.1;locus_tag=AO052_07605;product=hypothetical protein;protein_id=TMQ37697.1;transl_table=11
LNKO01000098.1	Genbank	gene	62879	65686	.	-	.	ID=gene-AO052_07610;Name=AO052_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07610
LNKO01000098.1	Protein Homology	CDS	62879	65686	.	-	0	ID=cds-TMQ37698.1;Parent=gene-AO052_07610;Dbxref=NCBI_GP:TMQ37698.1;Name=TMQ37698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526497.1;locus_tag=AO052_07610;product=ribonuclease E;protein_id=TMQ37698.1;transl_table=11
LNKO01000098.1	Genbank	gene	66107	67075	.	+	.	ID=gene-AO052_07615;Name=AO052_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07615
LNKO01000098.1	Protein Homology	CDS	66107	67075	.	+	0	ID=cds-TMQ37699.1;Parent=gene-AO052_07615;Dbxref=NCBI_GP:TMQ37699.1;Name=TMQ37699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652168.1;locus_tag=AO052_07615;product=23S rRNA pseudouridylate synthase;protein_id=TMQ37699.1;transl_table=11
LNKO01000098.1	Genbank	gene	67166	67441	.	+	.	ID=gene-AO052_07620;Name=AO052_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07620
LNKO01000098.1	Protein Homology	CDS	67166	67441	.	+	0	ID=cds-TMQ37700.1;Parent=gene-AO052_07620;Dbxref=NCBI_GP:TMQ37700.1;Name=TMQ37700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995110.1;locus_tag=AO052_07620;product=RNA-binding protein hfq;protein_id=TMQ37700.1;transl_table=11
LNKO01000098.1	Genbank	gene	67538	68494	.	-	.	ID=gene-AO052_07625;Name=AO052_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07625
LNKO01000098.1	Protein Homology	CDS	67538	68494	.	-	0	ID=cds-TMQ37701.1;Parent=gene-AO052_07625;Dbxref=NCBI_GP:TMQ37701.1;Name=TMQ37701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630049.1;locus_tag=AO052_07625;product=transcriptional regulator;protein_id=TMQ37701.1;transl_table=11
LNKO01000098.1	Genbank	gene	68609	70030	.	-	.	ID=gene-AO052_07630;Name=AO052_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07630
LNKO01000098.1	Protein Homology	CDS	68609	70030	.	-	0	ID=cds-TMQ37702.1;Parent=gene-AO052_07630;Dbxref=NCBI_GP:TMQ37702.1;Name=TMQ37702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666534.1;locus_tag=AO052_07630;product=peptidase M23;protein_id=TMQ37702.1;transl_table=11
LNKO01000098.1	Genbank	gene	70210	71016	.	+	.	ID=gene-AO052_07635;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=AO052_07635
LNKO01000098.1	Protein Homology	CDS	70210	71016	.	+	0	ID=cds-TMQ37703.1;Parent=gene-AO052_07635;Dbxref=NCBI_GP:TMQ37703.1;Name=TMQ37703.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766697.1;locus_tag=AO052_07635;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=TMQ37703.1;transl_table=11
LNKO01000098.1	Genbank	gene	71016	71801	.	+	.	ID=gene-AO052_07640;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=AO052_07640
LNKO01000098.1	Protein Homology	CDS	71016	71801	.	+	0	ID=cds-TMQ37704.1;Parent=gene-AO052_07640;Dbxref=NCBI_GP:TMQ37704.1;Name=TMQ37704.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633994.1;locus_tag=AO052_07640;product=high-affinity zinc transporter membrane component;protein_id=TMQ37704.1;transl_table=11
LNKO01000098.1	Genbank	gene	71890	72837	.	+	.	ID=gene-AO052_07645;Name=AO052_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07645
LNKO01000098.1	Protein Homology	CDS	71890	72837	.	+	0	ID=cds-TMQ37705.1;Parent=gene-AO052_07645;Dbxref=NCBI_GP:TMQ37705.1;Name=TMQ37705.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995107.1;locus_tag=AO052_07645;product=acetyl-CoA carboxylase subunit alpha;protein_id=TMQ37705.1;transl_table=11
LNKO01000098.1	Genbank	gene	73014	74306	.	+	.	ID=gene-AO052_07650;Name=AO052_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07650
LNKO01000098.1	Protein Homology	CDS	73014	74306	.	+	0	ID=cds-TMQ37706.1;Parent=gene-AO052_07650;Dbxref=NCBI_GP:TMQ37706.1;Name=TMQ37706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526502.1;locus_tag=AO052_07650;product=tRNA(Ile)-lysidine synthase;protein_id=TMQ37706.1;transl_table=11
LNKO01000098.1	Genbank	gene	74314	74985	.	-	.	ID=gene-AO052_07655;Name=AO052_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07655
LNKO01000098.1	Protein Homology	CDS	74314	74985	.	-	0	ID=cds-TMQ37707.1;Parent=gene-AO052_07655;Dbxref=NCBI_GP:TMQ37707.1;Name=TMQ37707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526503.1;locus_tag=AO052_07655;product=DNA mismatch repair protein MutH;protein_id=TMQ37707.1;transl_table=11
LNKO01000098.1	Genbank	gene	74982	75521	.	-	.	ID=gene-AO052_07660;Name=AO052_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07660
LNKO01000098.1	Protein Homology	CDS	74982	75521	.	-	0	ID=cds-TMQ37708.1;Parent=gene-AO052_07660;Dbxref=NCBI_GP:TMQ37708.1;Name=TMQ37708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44687.2;locus_tag=AO052_07660;product=cysteine methyltransferase;protein_id=TMQ37708.1;transl_table=11
LNKO01000098.1	Genbank	gene	75596	76945	.	-	.	ID=gene-AO052_07665;Name=AO052_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07665
LNKO01000098.1	Protein Homology	CDS	75596	76945	.	-	0	ID=cds-TMQ37709.1;Parent=gene-AO052_07665;Dbxref=NCBI_GP:TMQ37709.1;Name=TMQ37709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526505.1;locus_tag=AO052_07665;product=hypothetical protein;protein_id=TMQ37709.1;transl_table=11
LNKO01000098.1	Genbank	gene	77153	77440	.	+	.	ID=gene-AO052_07670;Name=AO052_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07670
LNKO01000098.1	Protein Homology	CDS	77153	77440	.	+	0	ID=cds-TMQ37710.1;Parent=gene-AO052_07670;Dbxref=NCBI_GP:TMQ37710.1;Name=TMQ37710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44686.1;locus_tag=AO052_07670;product=hypothetical protein;protein_id=TMQ37710.1;transl_table=11
LNKO01000098.1	Genbank	gene	77538	78359	.	-	.	ID=gene-AO052_07675;Name=AO052_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07675
LNKO01000098.1	Protein Homology	CDS	77538	78359	.	-	0	ID=cds-TMQ37711.1;Parent=gene-AO052_07675;Dbxref=NCBI_GP:TMQ37711.1;Name=TMQ37711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526507.1;locus_tag=AO052_07675;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=TMQ37711.1;transl_table=11
LNKO01000098.1	Genbank	gene	78369	79001	.	-	.	ID=gene-AO052_07680;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AO052_07680
LNKO01000098.1	Protein Homology	CDS	78369	79001	.	-	0	ID=cds-TMQ37712.1;Parent=gene-AO052_07680;Dbxref=NCBI_GP:TMQ37712.1;Name=TMQ37712.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691450.1;locus_tag=AO052_07680;product=ADP-ribose pyrophosphatase;protein_id=TMQ37712.1;transl_table=11
LNKO01000098.1	Genbank	gene	79134	80453	.	-	.	ID=gene-AO052_07685;Name=AO052_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07685
LNKO01000098.1	Protein Homology	CDS	79134	80453	.	-	0	ID=cds-TMQ37713.1;Parent=gene-AO052_07685;Dbxref=NCBI_GP:TMQ37713.1;Name=TMQ37713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688769.1;locus_tag=AO052_07685;product=exodeoxyribonuclease VII large subunit;protein_id=TMQ37713.1;transl_table=11
LNKO01000098.1	Genbank	gene	80455	81669	.	-	.	ID=gene-AO052_07690;Name=AO052_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07690
LNKO01000098.1	Protein Homology	CDS	80455	81669	.	-	0	ID=cds-TMQ37714.1;Parent=gene-AO052_07690;Dbxref=NCBI_GP:TMQ37714.1;Name=TMQ37714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995098.1;locus_tag=AO052_07690;product=ribosomal oxygenase;protein_id=TMQ37714.1;transl_table=11
LNKO01000098.1	Genbank	gene	81672	81980	.	-	.	ID=gene-AO052_07695;Name=AO052_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07695
LNKO01000098.1	Protein Homology	CDS	81672	81980	.	-	0	ID=cds-TMQ37715.1;Parent=gene-AO052_07695;Dbxref=NCBI_GP:TMQ37715.1;Name=TMQ37715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA93.1;locus_tag=AO052_07695;product=protein RnfH;protein_id=TMQ37715.1;transl_table=11
LNKO01000098.1	Genbank	gene	82163	82747	.	+	.	ID=gene-AO052_07700;Name=AO052_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07700
LNKO01000098.1	Protein Homology	CDS	82163	82747	.	+	0	ID=cds-TMQ37716.1;Parent=gene-AO052_07700;Dbxref=NCBI_GP:TMQ37716.1;Name=TMQ37716.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNE8.1;locus_tag=AO052_07700;product=peptidyl-tRNA hydrolase;protein_id=TMQ37716.1;transl_table=11
LNKO01000098.1	Genbank	gene	82796	83887	.	+	.	ID=gene-AO052_07705;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AO052_07705
LNKO01000098.1	Protein Homology	CDS	82796	83887	.	+	0	ID=cds-TMQ37717.1;Parent=gene-AO052_07705;Dbxref=NCBI_GP:TMQ37717.1;Name=TMQ37717.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44681.2;locus_tag=AO052_07705;product=GTP-binding protein;protein_id=TMQ37717.1;transl_table=11
LNKO01000098.1	Genbank	gene	83961	85841	.	+	.	ID=gene-AO052_07710;Name=AO052_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07710
LNKO01000098.1	Protein Homology	CDS	83961	85841	.	+	0	ID=cds-TMQ37718.1;Parent=gene-AO052_07710;Dbxref=NCBI_GP:TMQ37718.1;Name=TMQ37718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526512.1;locus_tag=AO052_07710;product=acyltransferase;protein_id=TMQ37718.1;transl_table=11
LNKO01000098.1	Genbank	gene	85884	87026	.	-	.	ID=gene-AO052_07715;Name=AO052_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07715
LNKO01000098.1	Protein Homology	CDS	85884	87026	.	-	0	ID=cds-TMQ37737.1;Parent=gene-AO052_07715;Dbxref=NCBI_GP:TMQ37737.1;Name=TMQ37737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691465.1;locus_tag=AO052_07715;product=ribonuclease D;protein_id=TMQ37737.1;transl_table=11
LNKO01000098.1	Genbank	gene	87083	88771	.	-	.	ID=gene-AO052_07720;Name=AO052_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07720
LNKO01000098.1	Protein Homology	CDS	87083	88771	.	-	0	ID=cds-TMQ37719.1;Parent=gene-AO052_07720;Dbxref=NCBI_GP:TMQ37719.1;Name=TMQ37719.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688783.1;locus_tag=AO052_07720;product=long-chain fatty acid--CoA ligase;protein_id=TMQ37719.1;transl_table=11
LNKO01000098.1	Genbank	gene	88814	89365	.	-	.	ID=gene-AO052_07725;Name=AO052_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07725
LNKO01000098.1	Protein Homology	CDS	88814	89365	.	-	0	ID=cds-TMQ37720.1;Parent=gene-AO052_07725;Dbxref=NCBI_GP:TMQ37720.1;Name=TMQ37720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659875.1;locus_tag=AO052_07725;product=hypothetical protein;protein_id=TMQ37720.1;transl_table=11
LNKO01000098.1	Genbank	gene	89390	90100	.	-	.	ID=gene-AO052_07730;Name=AO052_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07730
LNKO01000098.1	Protein Homology	CDS	89390	90100	.	-	0	ID=cds-TMQ37721.1;Parent=gene-AO052_07730;Dbxref=NCBI_GP:TMQ37721.1;Name=TMQ37721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641674.1;locus_tag=AO052_07730;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=TMQ37721.1;transl_table=11
LNKO01000098.1	Genbank	gene	90113	92035	.	-	.	ID=gene-AO052_07735;Name=AO052_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07735
LNKO01000098.1	Protein Homology	CDS	90113	92035	.	-	0	ID=cds-TMQ37722.1;Parent=gene-AO052_07735;Dbxref=NCBI_GP:TMQ37722.1;Name=TMQ37722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44680.1;locus_tag=AO052_07735;product=ATP-dependent helicase;protein_id=TMQ37722.1;transl_table=11
LNKO01000098.1	Genbank	gene	92361	92771	.	+	.	ID=gene-AO052_07740;Name=AO052_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07740
LNKO01000098.1	Protein Homology	CDS	92361	92771	.	+	0	ID=cds-TMQ37723.1;Parent=gene-AO052_07740;Dbxref=NCBI_GP:TMQ37723.1;Name=TMQ37723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526516.1;locus_tag=AO052_07740;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=TMQ37723.1;transl_table=11
LNKO01000098.1	Genbank	gene	92788	93474	.	+	.	ID=gene-AO052_07745;Name=AO052_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07745
LNKO01000098.1	Protein Homology	CDS	92788	93474	.	+	0	ID=cds-TMQ37724.1;Parent=gene-AO052_07745;Dbxref=NCBI_GP:TMQ37724.1;Name=TMQ37724.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43768.1;locus_tag=AO052_07745;product=protein TolQ;protein_id=TMQ37724.1;transl_table=11
LNKO01000098.1	Genbank	gene	93545	93964	.	+	.	ID=gene-AO052_07750;Name=AO052_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07750
LNKO01000098.1	Protein Homology	CDS	93545	93964	.	+	0	ID=cds-TMQ37725.1;Parent=gene-AO052_07750;Dbxref=NCBI_GP:TMQ37725.1;Name=TMQ37725.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43769.1;locus_tag=AO052_07750;product=protein TolR;protein_id=TMQ37725.1;transl_table=11
LNKO01000098.1	Genbank	gene	93980	95098	.	+	.	ID=gene-AO052_07755;Name=AO052_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07755
LNKO01000098.1	Protein Homology	CDS	93980	95098	.	+	0	ID=cds-TMQ37726.1;Parent=gene-AO052_07755;Dbxref=NCBI_GP:TMQ37726.1;Name=TMQ37726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44678.1;locus_tag=AO052_07755;product=protein TolA;protein_id=TMQ37726.1;transl_table=11
LNKO01000098.1	Genbank	gene	95140	96423	.	+	.	ID=gene-AO052_07760;Name=AO052_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07760
LNKO01000098.1	Protein Homology	CDS	95140	96423	.	+	0	ID=cds-TMQ37727.1;Parent=gene-AO052_07760;Dbxref=NCBI_GP:TMQ37727.1;Name=TMQ37727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626967.1;locus_tag=AO052_07760;product=translocation protein TolB;protein_id=TMQ37727.1;transl_table=11
LNKO01000098.1	Genbank	gene	96447	96908	.	+	.	ID=gene-AO052_07765;Name=AO052_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07765
LNKO01000098.1	Protein Homology	CDS	96447	96908	.	+	0	ID=cds-TMQ37728.1;Parent=gene-AO052_07765;Dbxref=NCBI_GP:TMQ37728.1;Name=TMQ37728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055001.1;locus_tag=AO052_07765;product=peptidoglycan-associated lipoprotein;protein_id=TMQ37728.1;transl_table=11
LNKO01000098.1	Genbank	gene	97063	97138	.	+	.	ID=gene-AO052_07770;Name=AO052_07770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_07770
LNKO01000098.1	tRNAscan-SE	tRNA	97063	97138	.	+	.	ID=rna-AO052_07770;Parent=gene-AO052_07770;anticodon=(pos:97096..97098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07770;product=tRNA-Lys
LNKO01000098.1	tRNAscan-SE	exon	97063	97138	.	+	.	ID=exon-AO052_07770-1;Parent=rna-AO052_07770;anticodon=(pos:97096..97098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07770;product=tRNA-Lys
LNKO01000098.1	Genbank	gene	97257	97787	.	-	.	ID=gene-AO052_07775;Name=AO052_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07775
LNKO01000098.1	Protein Homology	CDS	97257	97787	.	-	0	ID=cds-TMQ37729.1;Parent=gene-AO052_07775;Dbxref=NCBI_GP:TMQ37729.1;Name=TMQ37729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640779.1;locus_tag=AO052_07775;product=inorganic pyrophosphatase;protein_id=TMQ37729.1;transl_table=11
LNKO01000098.1	Genbank	gene	98021	99337	.	+	.	ID=gene-AO052_07780;Name=AO052_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07780
LNKO01000098.1	Protein Homology	CDS	98021	99337	.	+	0	ID=cds-TMQ37730.1;Parent=gene-AO052_07780;Dbxref=NCBI_GP:TMQ37730.1;Name=TMQ37730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637490.1;locus_tag=AO052_07780;product=permease;protein_id=TMQ37730.1;transl_table=11
LNKO01000098.1	Genbank	gene	99558	100199	.	+	.	ID=gene-AO052_07785;Name=AO052_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07785
LNKO01000098.1	Protein Homology	CDS	99558	100199	.	+	0	ID=cds-TMQ37731.1;Parent=gene-AO052_07785;Dbxref=NCBI_GP:TMQ37731.1;Name=TMQ37731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UB17.1;locus_tag=AO052_07785;product=uridine kinase;protein_id=TMQ37731.1;transl_table=11
LNKO01000098.1	Genbank	gene	100208	100795	.	+	.	ID=gene-AO052_07790;Name=AO052_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07790
LNKO01000098.1	Protein Homology	CDS	100208	100795	.	+	0	ID=cds-TMQ37732.1;Parent=gene-AO052_07790;Dbxref=NCBI_GP:TMQ37732.1;Name=TMQ37732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630145.1;locus_tag=AO052_07790;product=deoxycytidine triphosphate deaminase;protein_id=TMQ37732.1;transl_table=11
LNKO01000098.1	Genbank	gene	100799	101974	.	+	.	ID=gene-AO052_07795;Name=AO052_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07795
LNKO01000098.1	Protein Homology	CDS	100799	101974	.	+	0	ID=cds-TMQ37733.1;Parent=gene-AO052_07795;Dbxref=NCBI_GP:TMQ37733.1;Name=TMQ37733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649598.1;locus_tag=AO052_07795;product=hypothetical protein;protein_id=TMQ37733.1;transl_table=11
LNKO01000098.1	Genbank	gene	101974	103182	.	+	.	ID=gene-AO052_07800;Name=AO052_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07800
LNKO01000098.1	Protein Homology	CDS	101974	103182	.	+	0	ID=cds-TMQ37734.1;Parent=gene-AO052_07800;Dbxref=NCBI_GP:TMQ37734.1;Name=TMQ37734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526521.1;locus_tag=AO052_07800;product=sugar transporter;protein_id=TMQ37734.1;transl_table=11
LNKO01000098.1	Genbank	pseudogene	103243	104041	.	-	.	ID=gene-AO052_07805;Name=AO052_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07805;pseudo=true
LNKO01000098.1	Protein Homology	CDS	103243	104041	.	-	1	ID=cds-AO052_07805;Parent=gene-AO052_07805;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658087.1;locus_tag=AO052_07805;pseudo=true;transl_table=11
##sequence-region LNKO01000099.1 1 32413
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000099.1	Genbank	region	1	32413	.	+	.	ID=LNKO01000099.1:1..32413;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000099.1	Genbank	pseudogene	1	716	.	-	.	ID=gene-AO052_07810;Name=AO052_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07810;pseudo=true
LNKO01000099.1	Protein Homology	CDS	1	716	.	-	0	ID=cds-AO052_07810;Parent=gene-AO052_07810;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658087.1;locus_tag=AO052_07810;pseudo=true;transl_table=11
LNKO01000099.1	Genbank	gene	1132	1208	.	-	.	ID=gene-AO052_07815;Name=AO052_07815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_07815
LNKO01000099.1	tRNAscan-SE	tRNA	1132	1208	.	-	.	ID=rna-AO052_07815;Parent=gene-AO052_07815;anticodon=(pos:complement(1172..1174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07815;product=tRNA-Asp
LNKO01000099.1	tRNAscan-SE	exon	1132	1208	.	-	.	ID=exon-AO052_07815-1;Parent=rna-AO052_07815;anticodon=(pos:complement(1172..1174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07815;product=tRNA-Asp
LNKO01000099.1	Genbank	gene	1232	1308	.	-	.	ID=gene-AO052_07820;Name=AO052_07820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_07820
LNKO01000099.1	tRNAscan-SE	tRNA	1232	1308	.	-	.	ID=rna-AO052_07820;Parent=gene-AO052_07820;anticodon=(pos:complement(1272..1274));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07820;product=tRNA-Asp
LNKO01000099.1	tRNAscan-SE	exon	1232	1308	.	-	.	ID=exon-AO052_07820-1;Parent=rna-AO052_07820;anticodon=(pos:complement(1272..1274));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_07820;product=tRNA-Asp
LNKO01000099.1	Genbank	gene	1396	2166	.	-	.	ID=gene-AO052_07825;Name=AO052_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07825
LNKO01000099.1	Protein Homology	CDS	1396	2166	.	-	0	ID=cds-TMQ37464.1;Parent=gene-AO052_07825;Dbxref=NCBI_GP:TMQ37464.1;Name=TMQ37464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694424.1;locus_tag=AO052_07825;product=DNA polymerase III subunit epsilon;protein_id=TMQ37464.1;transl_table=11
LNKO01000099.1	Genbank	gene	2227	2691	.	+	.	ID=gene-AO052_07830;Name=AO052_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07830
LNKO01000099.1	Protein Homology	CDS	2227	2691	.	+	0	ID=cds-TMQ37465.1;Parent=gene-AO052_07830;Dbxref=NCBI_GP:TMQ37465.1;Name=TMQ37465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QP49.1;locus_tag=AO052_07830;product=ribonuclease H;protein_id=TMQ37465.1;transl_table=11
LNKO01000099.1	Genbank	gene	2947	4044	.	+	.	ID=gene-AO052_07835;Name=AO052_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07835
LNKO01000099.1	Protein Homology	CDS	2947	4044	.	+	0	ID=cds-TMQ37466.1;Parent=gene-AO052_07835;Dbxref=NCBI_GP:TMQ37466.1;Name=TMQ37466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527540.1;locus_tag=AO052_07835;product=hypothetical protein;protein_id=TMQ37466.1;transl_table=11
LNKO01000099.1	Genbank	gene	4241	5386	.	-	.	ID=gene-AO052_07840;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AO052_07840
LNKO01000099.1	Protein Homology	CDS	4241	5386	.	-	0	ID=cds-TMQ37467.1;Parent=gene-AO052_07840;Dbxref=NCBI_GP:TMQ37467.1;Name=TMQ37467.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668150.1;locus_tag=AO052_07840;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TMQ37467.1;transl_table=11
LNKO01000099.1	Genbank	gene	5440	6252	.	-	.	ID=gene-AO052_07845;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AO052_07845
LNKO01000099.1	Protein Homology	CDS	5440	6252	.	-	0	ID=cds-TMQ37468.1;Parent=gene-AO052_07845;Dbxref=NCBI_GP:TMQ37468.1;Name=TMQ37468.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526527.1;locus_tag=AO052_07845;product=glucosamine-6-phosphate deaminase;protein_id=TMQ37468.1;transl_table=11
LNKO01000099.1	Genbank	gene	6537	7418	.	-	.	ID=gene-AO052_07850;Name=AO052_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07850
LNKO01000099.1	Protein Homology	CDS	6537	7418	.	-	0	ID=cds-TMQ37469.1;Parent=gene-AO052_07850;Dbxref=NCBI_GP:TMQ37469.1;Name=TMQ37469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44539.1;locus_tag=AO052_07850;product=N-acetylneuraminate lyase;protein_id=TMQ37469.1;transl_table=11
LNKO01000099.1	Genbank	gene	7429	8295	.	-	.	ID=gene-AO052_07855;Name=AO052_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07855
LNKO01000099.1	Protein Homology	CDS	7429	8295	.	-	0	ID=cds-TMQ37470.1;Parent=gene-AO052_07855;Dbxref=NCBI_GP:TMQ37470.1;Name=TMQ37470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996323.1;locus_tag=AO052_07855;product=N-acetylmannosamine kinase;protein_id=TMQ37470.1;transl_table=11
LNKO01000099.1	Genbank	gene	8288	9190	.	-	.	ID=gene-AO052_07860;Name=AO052_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07860
LNKO01000099.1	Protein Homology	CDS	8288	9190	.	-	0	ID=cds-TMQ37471.1;Parent=gene-AO052_07860;Dbxref=NCBI_GP:TMQ37471.1;Name=TMQ37471.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFU9.1;locus_tag=AO052_07860;product=N-acetylmannosamine kinase;protein_id=TMQ37471.1;transl_table=11
LNKO01000099.1	Genbank	gene	9235	9921	.	-	.	ID=gene-AO052_07865;Name=AO052_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07865
LNKO01000099.1	Protein Homology	CDS	9235	9921	.	-	0	ID=cds-TMQ37472.1;Parent=gene-AO052_07865;Dbxref=NCBI_GP:TMQ37472.1;Name=TMQ37472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689955.1;locus_tag=AO052_07865;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TMQ37472.1;transl_table=11
LNKO01000099.1	Genbank	gene	10273	11259	.	+	.	ID=gene-AO052_07870;Name=AO052_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07870
LNKO01000099.1	Protein Homology	CDS	10273	11259	.	+	0	ID=cds-TMQ37492.1;Parent=gene-AO052_07870;Dbxref=NCBI_GP:TMQ37492.1;Name=TMQ37492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660884.1;locus_tag=AO052_07870;product=sialic acid-binding protein;protein_id=TMQ37492.1;transl_table=11
LNKO01000099.1	Genbank	gene	11324	13174	.	+	.	ID=gene-AO052_07875;Name=AO052_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07875
LNKO01000099.1	Protein Homology	CDS	11324	13174	.	+	0	ID=cds-TMQ37473.1;Parent=gene-AO052_07875;Dbxref=NCBI_GP:TMQ37473.1;Name=TMQ37473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701417.1;locus_tag=AO052_07875;product=C4-dicarboxylate ABC transporter permease;protein_id=TMQ37473.1;transl_table=11
LNKO01000099.1	Genbank	gene	13350	14477	.	+	.	ID=gene-AO052_07880;Name=AO052_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07880
LNKO01000099.1	Protein Homology	CDS	13350	14477	.	+	0	ID=cds-TMQ37474.1;Parent=gene-AO052_07880;Dbxref=NCBI_GP:TMQ37474.1;Name=TMQ37474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648627.1;locus_tag=AO052_07880;product=N-acetylneuraminic acid mutarotase;protein_id=TMQ37474.1;transl_table=11
LNKO01000099.1	Protein Homology	pseudogene	14639	15073	.	+	.	ID=gene-AO052_07885;Name=AO052_07885;Note=disrupted;description=isoprenylcysteine carboxyl methyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_07885;pseudo=true
LNKO01000099.1	Genbank	gene	15116	16003	.	-	.	ID=gene-AO052_07890;Name=AO052_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07890
LNKO01000099.1	Protein Homology	CDS	15116	16003	.	-	0	ID=cds-TMQ37475.1;Parent=gene-AO052_07890;Dbxref=NCBI_GP:TMQ37475.1;Name=TMQ37475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550571.1;locus_tag=AO052_07890;product=protease modulator HflC;protein_id=TMQ37475.1;transl_table=11
LNKO01000099.1	Genbank	gene	16003	17223	.	-	.	ID=gene-AO052_07895;Name=AO052_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07895
LNKO01000099.1	Protein Homology	CDS	16003	17223	.	-	0	ID=cds-TMQ37476.1;Parent=gene-AO052_07895;Dbxref=NCBI_GP:TMQ37476.1;Name=TMQ37476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668135.1;locus_tag=AO052_07895;product=membrane protease HflK;protein_id=TMQ37476.1;transl_table=11
LNKO01000099.1	Genbank	gene	17345	18052	.	-	.	ID=gene-AO052_07900;Name=AO052_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07900
LNKO01000099.1	Protein Homology	CDS	17345	18052	.	-	0	ID=cds-TMQ37477.1;Parent=gene-AO052_07900;Dbxref=NCBI_GP:TMQ37477.1;Name=TMQ37477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996315.1;locus_tag=AO052_07900;product=4'-phosphopantetheinyl transferase;protein_id=TMQ37477.1;transl_table=11
LNKO01000099.1	Genbank	gene	18112	19443	.	-	.	ID=gene-AO052_07905;Name=AO052_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07905
LNKO01000099.1	Protein Homology	CDS	18112	19443	.	-	0	ID=cds-TMQ37478.1;Parent=gene-AO052_07905;Dbxref=NCBI_GP:TMQ37478.1;Name=TMQ37478.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633267.1;locus_tag=AO052_07905;product=C4-dicarboxylate transporter;protein_id=TMQ37478.1;transl_table=11
LNKO01000099.1	Genbank	gene	19649	19879	.	-	.	ID=gene-AO052_07910;Name=AO052_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07910
LNKO01000099.1	Protein Homology	CDS	19649	19879	.	-	0	ID=cds-TMQ37479.1;Parent=gene-AO052_07910;Dbxref=NCBI_GP:TMQ37479.1;Name=TMQ37479.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CJS5.1;locus_tag=AO052_07910;product=acyl carrier protein;protein_id=TMQ37479.1;transl_table=11
LNKO01000099.1	Genbank	gene	20135	20863	.	-	.	ID=gene-AO052_07915;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AO052_07915
LNKO01000099.1	Protein Homology	CDS	20135	20863	.	-	0	ID=cds-TMQ37480.1;Parent=gene-AO052_07915;Dbxref=NCBI_GP:TMQ37480.1;Name=TMQ37480.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654404.1;locus_tag=AO052_07915;product=beta-ketoacyl-ACP reductase;protein_id=TMQ37480.1;transl_table=11
LNKO01000099.1	Genbank	gene	20876	21814	.	-	.	ID=gene-AO052_07920;Name=AO052_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07920
LNKO01000099.1	Protein Homology	CDS	20876	21814	.	-	0	ID=cds-TMQ37481.1;Parent=gene-AO052_07920;Dbxref=NCBI_GP:TMQ37481.1;Name=TMQ37481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43712.1;locus_tag=AO052_07920;product=malonyl CoA-ACP transacylase;protein_id=TMQ37481.1;transl_table=11
LNKO01000099.1	Genbank	gene	22438	23388	.	-	.	ID=gene-AO052_07925;Name=AO052_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07925
LNKO01000099.1	Protein Homology	CDS	22438	23388	.	-	0	ID=cds-TMQ37482.1;Parent=gene-AO052_07925;Dbxref=NCBI_GP:TMQ37482.1;Name=TMQ37482.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550567.1;locus_tag=AO052_07925;product=3-oxoacyl-ACP synthase;protein_id=TMQ37482.1;transl_table=11
LNKO01000099.1	Genbank	gene	23574	23744	.	-	.	ID=gene-AO052_07930;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AO052_07930
LNKO01000099.1	Protein Homology	CDS	23574	23744	.	-	0	ID=cds-TMQ37483.1;Parent=gene-AO052_07930;Dbxref=NCBI_GP:TMQ37483.1;Name=TMQ37483.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CJS9.2;locus_tag=AO052_07930;product=50S ribosomal protein L32;protein_id=TMQ37483.1;transl_table=11
LNKO01000099.1	Genbank	gene	23767	24291	.	-	.	ID=gene-AO052_07935;Name=AO052_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07935
LNKO01000099.1	Protein Homology	CDS	23767	24291	.	-	0	ID=cds-TMQ37484.1;Parent=gene-AO052_07935;Dbxref=NCBI_GP:TMQ37484.1;Name=TMQ37484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639928.1;locus_tag=AO052_07935;product=hypothetical protein;protein_id=TMQ37484.1;transl_table=11
LNKO01000099.1	Genbank	gene	24450	25334	.	+	.	ID=gene-AO052_07940;Name=AO052_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07940
LNKO01000099.1	Protein Homology	CDS	24450	25334	.	+	0	ID=cds-TMQ37493.1;Parent=gene-AO052_07940;Dbxref=NCBI_GP:TMQ37493.1;Name=TMQ37493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691516.1;locus_tag=AO052_07940;product=phosphatidylserine decarboxylase;protein_id=TMQ37493.1;transl_table=11
LNKO01000099.1	Genbank	gene	25443	26813	.	-	.	ID=gene-AO052_07945;Name=AO052_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07945
LNKO01000099.1	Protein Homology	CDS	25443	26813	.	-	0	ID=cds-TMQ37485.1;Parent=gene-AO052_07945;Dbxref=NCBI_GP:TMQ37485.1;Name=TMQ37485.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996309.1;locus_tag=AO052_07945;product=glutathione reductase;protein_id=TMQ37485.1;transl_table=11
LNKO01000099.1	Genbank	gene	27029	27628	.	-	.	ID=gene-AO052_07950;Name=AO052_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07950
LNKO01000099.1	Protein Homology	CDS	27029	27628	.	-	0	ID=cds-TMQ37486.1;Parent=gene-AO052_07950;Dbxref=NCBI_GP:TMQ37486.1;Name=TMQ37486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43782.1;locus_tag=AO052_07950;product=hypothetical protein;protein_id=TMQ37486.1;transl_table=11
LNKO01000099.1	Genbank	gene	27722	28033	.	+	.	ID=gene-AO052_07955;Name=AO052_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07955
LNKO01000099.1	Protein Homology	CDS	27722	28033	.	+	0	ID=cds-TMQ37487.1;Parent=gene-AO052_07955;Dbxref=NCBI_GP:TMQ37487.1;Name=TMQ37487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653788.1;locus_tag=AO052_07955;product=transcriptional regulator;protein_id=TMQ37487.1;transl_table=11
LNKO01000099.1	Genbank	gene	28324	29667	.	+	.	ID=gene-AO052_07960;Name=AO052_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07960
LNKO01000099.1	Protein Homology	CDS	28324	29667	.	+	0	ID=cds-TMQ37488.1;Parent=gene-AO052_07960;Dbxref=NCBI_GP:TMQ37488.1;Name=TMQ37488.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526540.1;locus_tag=AO052_07960;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=TMQ37488.1;transl_table=11
LNKO01000099.1	Genbank	gene	29670	30905	.	+	.	ID=gene-AO052_07965;Name=AO052_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07965
LNKO01000099.1	Protein Homology	CDS	29670	30905	.	+	0	ID=cds-TMQ37489.1;Parent=gene-AO052_07965;Dbxref=NCBI_GP:TMQ37489.1;Name=TMQ37489.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05011.1;locus_tag=AO052_07965;product=Na(+)-translocating NADH-quinone reductase subunit B;protein_id=TMQ37489.1;transl_table=11
LNKO01000099.1	Genbank	gene	30898	31632	.	+	.	ID=gene-AO052_07970;Name=AO052_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07970
LNKO01000099.1	Protein Homology	CDS	30898	31632	.	+	0	ID=cds-TMQ37490.1;Parent=gene-AO052_07970;Dbxref=NCBI_GP:TMQ37490.1;Name=TMQ37490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43957.1;locus_tag=AO052_07970;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=TMQ37490.1;transl_table=11
LNKO01000099.1	Genbank	gene	31632	32258	.	+	.	ID=gene-AO052_07975;Name=AO052_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07975
LNKO01000099.1	Protein Homology	CDS	31632	32258	.	+	0	ID=cds-TMQ37491.1;Parent=gene-AO052_07975;Dbxref=NCBI_GP:TMQ37491.1;Name=TMQ37491.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43958.2;locus_tag=AO052_07975;product=Na(+)-translocating NADH-quinone reductase subunit D;protein_id=TMQ37491.1;transl_table=11
##sequence-region LNKO01000100.1 1 7986
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000100.1	Genbank	region	1	7986	.	+	.	ID=LNKO01000100.1:1..7986;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000100.1	Genbank	gene	1	440	.	+	.	ID=gene-AO052_07980;Name=AO052_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07980;partial=true;start_range=.,1
LNKO01000100.1	Protein Homology	CDS	1	440	.	+	2	ID=cds-TMQ37385.1;Parent=gene-AO052_07980;Dbxref=NCBI_GP:TMQ37385.1;Name=TMQ37385.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629181.1;locus_tag=AO052_07980;partial=true;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=TMQ37385.1;start_range=.,1;transl_table=11
LNKO01000100.1	Genbank	gene	453	1688	.	+	.	ID=gene-AO052_07985;Name=AO052_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07985
LNKO01000100.1	Protein Homology	CDS	453	1688	.	+	0	ID=cds-TMQ37386.1;Parent=gene-AO052_07985;Dbxref=NCBI_GP:TMQ37386.1;Name=TMQ37386.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05012.1;locus_tag=AO052_07985;product=Na(+)-translocating NADH-quinone reductase subunit F;protein_id=TMQ37386.1;transl_table=11
LNKO01000100.1	Genbank	gene	1832	2872	.	+	.	ID=gene-AO052_07990;Name=AO052_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07990
LNKO01000100.1	Protein Homology	CDS	1832	2872	.	+	0	ID=cds-TMQ37387.1;Parent=gene-AO052_07990;Dbxref=NCBI_GP:TMQ37387.1;Name=TMQ37387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996303.1;locus_tag=AO052_07990;product=thiamine biosynthesis protein ApbE;protein_id=TMQ37387.1;transl_table=11
LNKO01000100.1	Genbank	gene	2875	3135	.	+	.	ID=gene-AO052_07995;Name=AO052_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_07995
LNKO01000100.1	Protein Homology	CDS	2875	3135	.	+	0	ID=cds-TMQ37388.1;Parent=gene-AO052_07995;Dbxref=NCBI_GP:TMQ37388.1;Name=TMQ37388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653798.1;locus_tag=AO052_07995;product=hypothetical protein;protein_id=TMQ37388.1;transl_table=11
LNKO01000100.1	Genbank	gene	3252	4403	.	+	.	ID=gene-AO052_08000;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AO052_08000
LNKO01000100.1	Protein Homology	CDS	3252	4403	.	+	0	ID=cds-TMQ37389.1;Parent=gene-AO052_08000;Dbxref=NCBI_GP:TMQ37389.1;Name=TMQ37389.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526544.1;locus_tag=AO052_08000;product=tRNA-specific 2-thiouridylase;protein_id=TMQ37389.1;transl_table=11
LNKO01000100.1	Genbank	gene	4447	5181	.	-	.	ID=gene-AO052_08005;Name=AO052_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08005
LNKO01000100.1	Protein Homology	CDS	4447	5181	.	-	0	ID=cds-TMQ37390.1;Parent=gene-AO052_08005;Dbxref=NCBI_GP:TMQ37390.1;Name=TMQ37390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44552.1;locus_tag=AO052_08005;product=laccase;protein_id=TMQ37390.1;transl_table=11
LNKO01000100.1	Genbank	gene	5183	6157	.	-	.	ID=gene-AO052_08010;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AO052_08010
LNKO01000100.1	Protein Homology	CDS	5183	6157	.	-	0	ID=cds-TMQ37391.1;Parent=gene-AO052_08010;Dbxref=NCBI_GP:TMQ37391.1;Name=TMQ37391.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550559.1;locus_tag=AO052_08010;product=23S rRNA pseudouridylate synthase;protein_id=TMQ37391.1;transl_table=11
LNKO01000100.1	Genbank	gene	6265	7053	.	+	.	ID=gene-AO052_08015;Name=AO052_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08015
LNKO01000100.1	Protein Homology	CDS	6265	7053	.	+	0	ID=cds-TMQ37392.1;Parent=gene-AO052_08015;Dbxref=NCBI_GP:TMQ37392.1;Name=TMQ37392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44553.1;locus_tag=AO052_08015;product=outer membrane assembly protein BamD;protein_id=TMQ37392.1;transl_table=11
LNKO01000100.1	Genbank	gene	7133	7615	.	-	.	ID=gene-AO052_08020;Name=AO052_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08020
LNKO01000100.1	Protein Homology	CDS	7133	7615	.	-	0	ID=cds-TMQ37393.1;Parent=gene-AO052_08020;Dbxref=NCBI_GP:TMQ37393.1;Name=TMQ37393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701431.1;locus_tag=AO052_08020;product=hypothetical protein;protein_id=TMQ37393.1;transl_table=11
LNKO01000100.1	Genbank	pseudogene	7647	7986	.	-	.	ID=gene-AO052_08025;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=pseudogene;locus_tag=AO052_08025;pseudo=true
LNKO01000100.1	Protein Homology	CDS	7647	7986	.	-	1	ID=cds-AO052_08025;Parent=gene-AO052_08025;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635116.1;locus_tag=AO052_08025;pseudo=true;transl_table=11
##sequence-region LNKO01000101.1 1 41920
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000101.1	Genbank	region	1	41920	.	+	.	ID=LNKO01000101.1:1..41920;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000101.1	Genbank	pseudogene	1	401	.	-	.	ID=gene-AO052_08030;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=pseudogene;locus_tag=AO052_08030;pseudo=true
LNKO01000101.1	Protein Homology	CDS	1	401	.	-	0	ID=cds-AO052_08030;Parent=gene-AO052_08030;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695256.1;locus_tag=AO052_08030;pseudo=true;transl_table=11
LNKO01000101.1	Genbank	gene	517	807	.	-	.	ID=gene-AO052_08035;Name=AO052_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08035
LNKO01000101.1	Protein Homology	CDS	517	807	.	-	0	ID=cds-TMQ37319.1;Parent=gene-AO052_08035;Dbxref=NCBI_GP:TMQ37319.1;Name=TMQ37319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647085.1;locus_tag=AO052_08035;product=antibiotic biosynthesis monooxygenase;protein_id=TMQ37319.1;transl_table=11
LNKO01000101.1	Genbank	gene	888	3200	.	-	.	ID=gene-AO052_08040;Name=AO052_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08040
LNKO01000101.1	Protein Homology	CDS	888	3200	.	-	0	ID=cds-TMQ37320.1;Parent=gene-AO052_08040;Dbxref=NCBI_GP:TMQ37320.1;Name=TMQ37320.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43753.2;locus_tag=AO052_08040;product=pyruvate formate-lyase;protein_id=TMQ37320.1;transl_table=11
LNKO01000101.1	Genbank	gene	3238	4092	.	-	.	ID=gene-AO052_08045;Name=AO052_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08045
LNKO01000101.1	Protein Homology	CDS	3238	4092	.	-	0	ID=cds-TMQ37321.1;Parent=gene-AO052_08045;Dbxref=NCBI_GP:TMQ37321.1;Name=TMQ37321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627709.1;locus_tag=AO052_08045;product=formate transporter FocA;protein_id=TMQ37321.1;transl_table=11
LNKO01000101.1	Genbank	gene	4597	5511	.	+	.	ID=gene-AO052_08050;Name=AO052_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08050
LNKO01000101.1	Protein Homology	CDS	4597	5511	.	+	0	ID=cds-TMQ37322.1;Parent=gene-AO052_08050;Dbxref=NCBI_GP:TMQ37322.1;Name=TMQ37322.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996293.1;locus_tag=AO052_08050;product=N-acetylglucosamine kinase;protein_id=TMQ37322.1;transl_table=11
LNKO01000101.1	Genbank	gene	5696	7135	.	+	.	ID=gene-AO052_08055;Name=AO052_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08055
LNKO01000101.1	Protein Homology	CDS	5696	7135	.	+	0	ID=cds-TMQ37323.1;Parent=gene-AO052_08055;Dbxref=NCBI_GP:TMQ37323.1;Name=TMQ37323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658154.1;locus_tag=AO052_08055;product=sodium:alanine symporter;protein_id=TMQ37323.1;transl_table=11
LNKO01000101.1	Protein Homology	pseudogene	7320	8027	.	-	.	ID=gene-AO052_08060;Name=AO052_08060;Note=disrupted;description=S-formylglutathione hydrolase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08060;pseudo=true
LNKO01000101.1	Genbank	gene	8169	8576	.	+	.	ID=gene-AO052_08065;Name=AO052_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08065
LNKO01000101.1	Protein Homology	CDS	8169	8576	.	+	0	ID=cds-TMQ37324.1;Parent=gene-AO052_08065;Dbxref=NCBI_GP:TMQ37324.1;Name=TMQ37324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661364.1;locus_tag=AO052_08065;product=MerR family transcriptional regulator;protein_id=TMQ37324.1;transl_table=11
LNKO01000101.1	Genbank	gene	8794	9021	.	+	.	ID=gene-AO052_08070;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AO052_08070
LNKO01000101.1	Protein Homology	CDS	8794	9021	.	+	0	ID=cds-TMQ37325.1;Parent=gene-AO052_08070;Dbxref=NCBI_GP:TMQ37325.1;Name=TMQ37325.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629124.1;locus_tag=AO052_08070;product=preprotein translocase subunit SecA;protein_id=TMQ37325.1;transl_table=11
LNKO01000101.1	Genbank	gene	9025	9585	.	+	.	ID=gene-AO052_08075;Name=AO052_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08075
LNKO01000101.1	Protein Homology	CDS	9025	9585	.	+	0	ID=cds-TMQ37326.1;Parent=gene-AO052_08075;Dbxref=NCBI_GP:TMQ37326.1;Name=TMQ37326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054864.1;locus_tag=AO052_08075;product=preprotein translocase subunit TatB;protein_id=TMQ37326.1;transl_table=11
LNKO01000101.1	Genbank	gene	9595	10365	.	+	.	ID=gene-AO052_08080;Name=AO052_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08080
LNKO01000101.1	Protein Homology	CDS	9595	10365	.	+	0	ID=cds-TMQ37327.1;Parent=gene-AO052_08080;Dbxref=NCBI_GP:TMQ37327.1;Name=TMQ37327.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701438.1;locus_tag=AO052_08080;product=twin-arginine protein translocation system subunit TatC;protein_id=TMQ37327.1;transl_table=11
LNKO01000101.1	Genbank	gene	10727	12076	.	+	.	ID=gene-AO052_08085;Name=AO052_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08085
LNKO01000101.1	Protein Homology	CDS	10727	12076	.	+	0	ID=cds-TMQ37328.1;Parent=gene-AO052_08085;Dbxref=NCBI_GP:TMQ37328.1;Name=TMQ37328.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671207.1;locus_tag=AO052_08085;product=glutamate dehydrogenase;protein_id=TMQ37328.1;transl_table=11
LNKO01000101.1	Genbank	gene	12184	12624	.	-	.	ID=gene-AO052_08090;Name=AO052_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08090
LNKO01000101.1	Protein Homology	CDS	12184	12624	.	-	0	ID=cds-TMQ37329.1;Parent=gene-AO052_08090;Dbxref=NCBI_GP:TMQ37329.1;Name=TMQ37329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648707.1;locus_tag=AO052_08090;product=Fur family transcriptional regulator;protein_id=TMQ37329.1;transl_table=11
LNKO01000101.1	Genbank	gene	12653	13177	.	-	.	ID=gene-AO052_08095;Name=AO052_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08095
LNKO01000101.1	Protein Homology	CDS	12653	13177	.	-	0	ID=cds-TMQ37330.1;Parent=gene-AO052_08095;Dbxref=NCBI_GP:TMQ37330.1;Name=TMQ37330.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664331.1;locus_tag=AO052_08095;product=flavodoxin FldA;protein_id=TMQ37330.1;transl_table=11
LNKO01000101.1	Genbank	gene	13274	14056	.	-	.	ID=gene-AO052_08100;Name=AO052_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08100
LNKO01000101.1	Protein Homology	CDS	13274	14056	.	-	0	ID=cds-TMQ37331.1;Parent=gene-AO052_08100;Dbxref=NCBI_GP:TMQ37331.1;Name=TMQ37331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550552.1;locus_tag=AO052_08100;product=acyl-CoA esterase;protein_id=TMQ37331.1;transl_table=11
LNKO01000101.1	Genbank	gene	14127	14720	.	+	.	ID=gene-AO052_08105;Name=AO052_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08105
LNKO01000101.1	Protein Homology	CDS	14127	14720	.	+	0	ID=cds-TMQ37332.1;Parent=gene-AO052_08105;Dbxref=NCBI_GP:TMQ37332.1;Name=TMQ37332.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44564.1;locus_tag=AO052_08105;product=replication initiation regulator SeqA;protein_id=TMQ37332.1;transl_table=11
LNKO01000101.1	Genbank	gene	14723	16081	.	+	.	ID=gene-AO052_08110;Name=AO052_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08110
LNKO01000101.1	Protein Homology	CDS	14723	16081	.	+	0	ID=cds-TMQ37333.1;Parent=gene-AO052_08110;Dbxref=NCBI_GP:TMQ37333.1;Name=TMQ37333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550551.1;locus_tag=AO052_08110;product=2-succinylbenzoate-CoA ligase;protein_id=TMQ37333.1;transl_table=11
LNKO01000101.1	Genbank	gene	16123	19443	.	+	.	ID=gene-AO052_08115;Name=AO052_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08115
LNKO01000101.1	Protein Homology	CDS	16123	19443	.	+	0	ID=cds-TMQ37334.1;Parent=gene-AO052_08115;Dbxref=NCBI_GP:TMQ37334.1;Name=TMQ37334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688089.1;locus_tag=AO052_08115;product=hypothetical protein;protein_id=TMQ37334.1;transl_table=11
LNKO01000101.1	Genbank	gene	19453	20526	.	+	.	ID=gene-AO052_08120;Name=AO052_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08120
LNKO01000101.1	Protein Homology	CDS	19453	20526	.	+	0	ID=cds-TMQ37335.1;Parent=gene-AO052_08120;Dbxref=NCBI_GP:TMQ37335.1;Name=TMQ37335.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630662.1;locus_tag=AO052_08120;product=chorismate synthase;protein_id=TMQ37335.1;transl_table=11
LNKO01000101.1	Genbank	gene	20611	21471	.	+	.	ID=gene-AO052_08125;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AO052_08125
LNKO01000101.1	Protein Homology	CDS	20611	21471	.	+	0	ID=cds-TMQ37336.1;Parent=gene-AO052_08125;Dbxref=NCBI_GP:TMQ37336.1;Name=TMQ37336.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701442.1;locus_tag=AO052_08125;product=murein endopeptidase;protein_id=TMQ37336.1;transl_table=11
LNKO01000101.1	Genbank	gene	21489	22256	.	+	.	ID=gene-AO052_08130;Name=AO052_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08130
LNKO01000101.1	Protein Homology	CDS	21489	22256	.	+	0	ID=cds-TMQ37337.1;Parent=gene-AO052_08130;Dbxref=NCBI_GP:TMQ37337.1;Name=TMQ37337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689688.1;locus_tag=AO052_08130;product=hypothetical protein;protein_id=TMQ37337.1;transl_table=11
LNKO01000101.1	Genbank	gene	22303	23259	.	+	.	ID=gene-AO052_08135;Name=AO052_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08135
LNKO01000101.1	Protein Homology	CDS	22303	23259	.	+	0	ID=cds-TMQ37338.1;Parent=gene-AO052_08135;Dbxref=NCBI_GP:TMQ37338.1;Name=TMQ37338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701444.1;locus_tag=AO052_08135;product=lauroyl acyltransferase;protein_id=TMQ37338.1;transl_table=11
LNKO01000101.1	Protein Homology	pseudogene	23386	24354	.	+	.	ID=gene-AO052_08140;Name=AO052_08140;Note=disrupted;description=selenide%2C water dikinase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08140;pseudo=true
LNKO01000101.1	Genbank	gene	24464	24814	.	-	.	ID=gene-AO052_08145;Name=AO052_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08145
LNKO01000101.1	Protein Homology	CDS	24464	24814	.	-	0	ID=cds-TMQ37339.1;Parent=gene-AO052_08145;Dbxref=NCBI_GP:TMQ37339.1;Name=TMQ37339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44357.2;locus_tag=AO052_08145;product=50S ribosomal protein L19;protein_id=TMQ37339.1;transl_table=11
LNKO01000101.1	Genbank	gene	24851	25591	.	-	.	ID=gene-AO052_08150;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AO052_08150
LNKO01000101.1	Protein Homology	CDS	24851	25591	.	-	0	ID=cds-TMQ37340.1;Parent=gene-AO052_08150;Dbxref=NCBI_GP:TMQ37340.1;Name=TMQ37340.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAV3.1;locus_tag=AO052_08150;product=tRNA (guanine-N1)-methyltransferase;protein_id=TMQ37340.1;transl_table=11
LNKO01000101.1	Genbank	gene	25629	26156	.	-	.	ID=gene-AO052_08155;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AO052_08155
LNKO01000101.1	Protein Homology	CDS	25629	26156	.	-	0	ID=cds-TMQ37341.1;Parent=gene-AO052_08155;Dbxref=NCBI_GP:TMQ37341.1;Name=TMQ37341.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNY7.2;locus_tag=AO052_08155;product=16S rRNA-processing protein RimM;protein_id=TMQ37341.1;transl_table=11
LNKO01000101.1	Genbank	gene	26201	26449	.	-	.	ID=gene-AO052_08160;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AO052_08160
LNKO01000101.1	Protein Homology	CDS	26201	26449	.	-	0	ID=cds-TMQ37342.1;Parent=gene-AO052_08160;Dbxref=NCBI_GP:TMQ37342.1;Name=TMQ37342.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:SwissProt:P44382.1;locus_tag=AO052_08160;product=30S ribosomal protein S16;protein_id=TMQ37342.1;transl_table=11
LNKO01000101.1	Genbank	gene	26742	27515	.	+	.	ID=gene-AO052_08165;Name=AO052_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08165
LNKO01000101.1	Protein Homology	CDS	26742	27515	.	+	0	ID=cds-TMQ37343.1;Parent=gene-AO052_08165;Dbxref=NCBI_GP:TMQ37343.1;Name=TMQ37343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43963.1;locus_tag=AO052_08165;product=hypothetical protein;protein_id=TMQ37343.1;transl_table=11
LNKO01000101.1	Genbank	gene	27538	29349	.	+	.	ID=gene-AO052_08170;Name=AO052_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08170
LNKO01000101.1	Protein Homology	CDS	27538	29349	.	+	0	ID=cds-TMQ37344.1;Parent=gene-AO052_08170;Dbxref=NCBI_GP:TMQ37344.1;Name=TMQ37344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996272.1;locus_tag=AO052_08170;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=TMQ37344.1;transl_table=11
LNKO01000101.1	Genbank	gene	29633	30175	.	+	.	ID=gene-AO052_08175;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AO052_08175
LNKO01000101.1	Protein Homology	CDS	29633	30175	.	+	0	ID=cds-TMQ37345.1;Parent=gene-AO052_08175;Dbxref=NCBI_GP:TMQ37345.1;Name=TMQ37345.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAU9.1;locus_tag=AO052_08175;product=shikimate kinase;protein_id=TMQ37345.1;transl_table=11
LNKO01000101.1	Genbank	gene	30195	31283	.	+	.	ID=gene-AO052_08180;Name=AO052_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08180
LNKO01000101.1	Protein Homology	CDS	30195	31283	.	+	0	ID=cds-TMQ37346.1;Parent=gene-AO052_08180;Dbxref=NCBI_GP:TMQ37346.1;Name=TMQ37346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526563.1;locus_tag=AO052_08180;product=3-dehydroquinate synthase;protein_id=TMQ37346.1;transl_table=11
LNKO01000101.1	Genbank	gene	31285	32145	.	+	.	ID=gene-AO052_08185;Name=AO052_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08185
LNKO01000101.1	Protein Homology	CDS	31285	32145	.	+	0	ID=cds-TMQ37347.1;Parent=gene-AO052_08185;Dbxref=NCBI_GP:TMQ37347.1;Name=TMQ37347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996270.1;locus_tag=AO052_08185;product=DNA adenine methylase;protein_id=TMQ37347.1;transl_table=11
LNKO01000101.1	Genbank	gene	33235	33960	.	-	.	ID=gene-AO052_08190;Name=AO052_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08190
LNKO01000101.1	Protein Homology	CDS	33235	33960	.	-	0	ID=cds-TMQ37348.1;Parent=gene-AO052_08190;Dbxref=NCBI_GP:TMQ37348.1;Name=TMQ37348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653880.1;locus_tag=AO052_08190;product=phosphatidylglycerophosphatase;protein_id=TMQ37348.1;transl_table=11
LNKO01000101.1	Genbank	gene	34029	34679	.	+	.	ID=gene-AO052_08195;Name=AO052_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08195
LNKO01000101.1	Protein Homology	CDS	34029	34679	.	+	0	ID=cds-TMQ37349.1;Parent=gene-AO052_08195;Dbxref=NCBI_GP:TMQ37349.1;Name=TMQ37349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639470.1;locus_tag=AO052_08195;product=GTP cyclohydrolase;protein_id=TMQ37349.1;transl_table=11
LNKO01000101.1	Genbank	gene	34997	36541	.	-	.	ID=gene-AO052_08200;Name=AO052_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08200
LNKO01000101.1	Protein Homology	CDS	34997	36541	.	-	0	ID=cds-TMQ37350.1;Parent=gene-AO052_08200;Dbxref=NCBI_GP:TMQ37350.1;Name=TMQ37350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44572.1;locus_tag=AO052_08200;product=hypothetical protein;protein_id=TMQ37350.1;transl_table=11
LNKO01000101.1	Genbank	gene	36534	36896	.	-	.	ID=gene-AO052_08205;Name=AO052_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08205
LNKO01000101.1	Protein Homology	CDS	36534	36896	.	-	0	ID=cds-TMQ37351.1;Parent=gene-AO052_08205;Dbxref=NCBI_GP:TMQ37351.1;Name=TMQ37351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648761.1;locus_tag=AO052_08205;product=hypothetical protein;protein_id=TMQ37351.1;transl_table=11
LNKO01000101.1	Genbank	gene	37021	39060	.	+	.	ID=gene-AO052_08210;Name=AO052_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08210
LNKO01000101.1	Protein Homology	CDS	37021	39060	.	+	0	ID=cds-TMQ37354.1;Parent=gene-AO052_08210;Dbxref=NCBI_GP:TMQ37354.1;Name=TMQ37354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44573.1;locus_tag=AO052_08210;product=oligopeptidase A;protein_id=TMQ37354.1;transl_table=11
LNKO01000101.1	Genbank	gene	39292	40836	.	+	.	ID=gene-AO052_08215;Name=AO052_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08215
LNKO01000101.1	Protein Homology	CDS	39292	40836	.	+	0	ID=cds-TMQ37352.1;Parent=gene-AO052_08215;Dbxref=NCBI_GP:TMQ37352.1;Name=TMQ37352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701453.1;locus_tag=AO052_08215;product=restriction endonuclease;protein_id=TMQ37352.1;transl_table=11
LNKO01000101.1	Genbank	gene	40839	41837	.	+	.	ID=gene-AO052_08220;Name=AO052_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08220
LNKO01000101.1	Protein Homology	CDS	40839	41837	.	+	0	ID=cds-TMQ37353.1;Parent=gene-AO052_08220;Dbxref=NCBI_GP:TMQ37353.1;Name=TMQ37353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996261.1;locus_tag=AO052_08220;product=cell filamentation protein Fic;protein_id=TMQ37353.1;transl_table=11
##sequence-region LNKO01000102.1 1 729
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000102.1	Genbank	region	1	729	.	+	.	ID=LNKO01000102.1:1..729;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000102.1	Genbank	pseudogene	1	651	.	+	.	ID=gene-AO052_08225;Name=AO052_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08225;pseudo=true
LNKO01000102.1	Protein Homology	CDS	1	651	.	+	0	ID=cds-AO052_08225;Parent=gene-AO052_08225;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527520.1;locus_tag=AO052_08225;pseudo=true;transl_table=11
##sequence-region LNKO01000103.1 1 8618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000103.1	Genbank	region	1	8618	.	+	.	ID=LNKO01000103.1:1..8618;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000103.1	Genbank	pseudogene	1	596	.	+	.	ID=gene-AO052_08230;Name=AO052_08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08230;pseudo=true
LNKO01000103.1	Protein Homology	CDS	1	596	.	+	2	ID=cds-AO052_08230;Parent=gene-AO052_08230;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527520.1;locus_tag=AO052_08230;pseudo=true;transl_table=11
LNKO01000103.1	Genbank	gene	603	1523	.	+	.	ID=gene-AO052_08235;Name=AO052_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08235
LNKO01000103.1	Protein Homology	CDS	603	1523	.	+	0	ID=cds-TMQ37244.1;Parent=gene-AO052_08235;Dbxref=NCBI_GP:TMQ37244.1;Name=TMQ37244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526569.1;locus_tag=AO052_08235;product=CAAX protease;protein_id=TMQ37244.1;transl_table=11
LNKO01000103.1	Genbank	gene	1767	4850	.	+	.	ID=gene-AO052_08240;Name=AO052_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08240
LNKO01000103.1	Protein Homology	CDS	1767	4850	.	+	0	ID=cds-TMQ37245.1;Parent=gene-AO052_08240;Dbxref=NCBI_GP:TMQ37245.1;Name=TMQ37245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996257.1;locus_tag=AO052_08240;product=DEAD/DEAH box helicase;protein_id=TMQ37245.1;transl_table=11
LNKO01000103.1	Genbank	gene	5011	5640	.	-	.	ID=gene-AO052_08245;Name=AO052_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08245
LNKO01000103.1	Protein Homology	CDS	5011	5640	.	-	0	ID=cds-TMQ37246.1;Parent=gene-AO052_08245;Dbxref=NCBI_GP:TMQ37246.1;Name=TMQ37246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996256.1;locus_tag=AO052_08245;product=hypothetical protein;protein_id=TMQ37246.1;transl_table=11
LNKO01000103.1	Genbank	gene	5854	7650	.	-	.	ID=gene-AO052_08250;Name=AO052_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08250
LNKO01000103.1	Protein Homology	CDS	5854	7650	.	-	0	ID=cds-TMQ37247.1;Parent=gene-AO052_08250;Dbxref=NCBI_GP:TMQ37247.1;Name=TMQ37247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658465.1;locus_tag=AO052_08250;product=hybrid sensor histidine kinase/response regulator;protein_id=TMQ37247.1;transl_table=11
LNKO01000103.1	Genbank	gene	7764	8339	.	-	.	ID=gene-AO052_08255;Name=AO052_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08255
LNKO01000103.1	Protein Homology	CDS	7764	8339	.	-	0	ID=cds-TMQ37248.1;Parent=gene-AO052_08255;Dbxref=NCBI_GP:TMQ37248.1;Name=TMQ37248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526572.1;locus_tag=AO052_08255;product=uracil-DNA glycosylase;protein_id=TMQ37248.1;transl_table=11
##sequence-region LNKO01000104.1 1 1980
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000104.1	Genbank	region	1	1980	.	+	.	ID=LNKO01000104.1:1..1980;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000104.1	Genbank	pseudogene	1	334	.	+	.	ID=gene-AO052_08260;Name=AO052_08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08260;pseudo=true
LNKO01000104.1	Protein Homology	CDS	1	334	.	+	1	ID=cds-AO052_08260;Parent=gene-AO052_08260;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525911.1;locus_tag=AO052_08260;pseudo=true;transl_table=11
LNKO01000104.1	Genbank	gene	458	874	.	+	.	ID=gene-AO052_08265;Name=AO052_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08265
LNKO01000104.1	Protein Homology	CDS	458	874	.	+	0	ID=cds-TMQ37240.1;Parent=gene-AO052_08265;Dbxref=NCBI_GP:TMQ37240.1;Name=TMQ37240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525910.1;locus_tag=AO052_08265;product=virion morphogenesis protein;protein_id=TMQ37240.1;transl_table=11
LNKO01000104.1	Genbank	gene	1248	1980	.	-	.	ID=gene-AO052_08270;Name=AO052_08270;end_range=1980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08270;partial=true
LNKO01000104.1	Protein Homology	CDS	1248	1980	.	-	1	ID=cds-TMQ37241.1;Parent=gene-AO052_08270;Dbxref=NCBI_GP:TMQ37241.1;Name=TMQ37241.1;end_range=1980,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527719.1;locus_tag=AO052_08270;partial=true;product=lipopolysaccharide cholinephosphotransferase;protein_id=TMQ37241.1;transl_table=11
##sequence-region LNKO01000105.1 1 24813
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000105.1	Genbank	region	1	24813	.	+	.	ID=LNKO01000105.1:1..24813;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000105.1	Genbank	pseudogene	1	262	.	+	.	ID=gene-AO052_08275;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO052_08275;pseudo=true
LNKO01000105.1	Protein Homology	CDS	1	262	.	+	1	ID=cds-AO052_08275;Parent=gene-AO052_08275;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759586.1;locus_tag=AO052_08275;pseudo=true;transl_table=11
LNKO01000105.1	Genbank	gene	745	1023	.	+	.	ID=gene-AO052_08280;Name=AO052_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08280
LNKO01000105.1	Protein Homology	CDS	745	1023	.	+	0	ID=cds-TMQ37187.1;Parent=gene-AO052_08280;Dbxref=NCBI_GP:TMQ37187.1;Name=TMQ37187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693041.1;locus_tag=AO052_08280;product=chloride channel protein;protein_id=TMQ37187.1;transl_table=11
LNKO01000105.1	Genbank	gene	948	1196	.	+	.	ID=gene-AO052_08285;Name=AO052_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08285
LNKO01000105.1	Protein Homology	CDS	948	1196	.	+	0	ID=cds-TMQ37212.1;Parent=gene-AO052_08285;Dbxref=NCBI_GP:TMQ37212.1;Name=TMQ37212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690094.1;locus_tag=AO052_08285;product=hypothetical protein;protein_id=TMQ37212.1;transl_table=11
LNKO01000105.1	Genbank	gene	1199	2182	.	+	.	ID=gene-AO052_08290;Name=AO052_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08290
LNKO01000105.1	Protein Homology	CDS	1199	2182	.	+	0	ID=cds-TMQ37188.1;Parent=gene-AO052_08290;Dbxref=NCBI_GP:TMQ37188.1;Name=TMQ37188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688122.1;locus_tag=AO052_08290;product=tRNA-dihydrouridine synthase A;protein_id=TMQ37188.1;transl_table=11
LNKO01000105.1	Genbank	gene	2230	2520	.	-	.	ID=gene-AO052_08295;Name=AO052_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08295
LNKO01000105.1	Protein Homology	CDS	2230	2520	.	-	0	ID=cds-TMQ37189.1;Parent=gene-AO052_08295;Dbxref=NCBI_GP:TMQ37189.1;Name=TMQ37189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44027.1;locus_tag=AO052_08295;product=hypothetical protein;protein_id=TMQ37189.1;transl_table=11
LNKO01000105.1	Genbank	gene	2542	3546	.	-	.	ID=gene-AO052_08300;Name=AO052_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08300
LNKO01000105.1	Protein Homology	CDS	2542	3546	.	-	0	ID=cds-TMQ37190.1;Parent=gene-AO052_08300;Dbxref=NCBI_GP:TMQ37190.1;Name=TMQ37190.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632272.1;locus_tag=AO052_08300;product=tryptophan--tRNA ligase;protein_id=TMQ37190.1;transl_table=11
LNKO01000105.1	Genbank	gene	3675	4292	.	+	.	ID=gene-AO052_08305;Name=AO052_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08305
LNKO01000105.1	Protein Homology	CDS	3675	4292	.	+	0	ID=cds-TMQ37191.1;Parent=gene-AO052_08305;Dbxref=NCBI_GP:TMQ37191.1;Name=TMQ37191.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701780.1;locus_tag=AO052_08305;product=lysogenization protein HflD;protein_id=TMQ37191.1;transl_table=11
LNKO01000105.1	Genbank	gene	4315	5685	.	+	.	ID=gene-AO052_08310;Name=AO052_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08310
LNKO01000105.1	Protein Homology	CDS	4315	5685	.	+	0	ID=cds-TMQ37192.1;Parent=gene-AO052_08310;Dbxref=NCBI_GP:TMQ37192.1;Name=TMQ37192.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654504.1;locus_tag=AO052_08310;product=adenylosuccinate lyase;protein_id=TMQ37192.1;transl_table=11
LNKO01000105.1	Genbank	gene	5957	6448	.	+	.	ID=gene-AO052_08315;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AO052_08315
LNKO01000105.1	Protein Homology	CDS	5957	6448	.	+	0	ID=cds-TMQ37193.1;Parent=gene-AO052_08315;Dbxref=NCBI_GP:TMQ37193.1;Name=TMQ37193.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694693.1;locus_tag=AO052_08315;product=50S ribosomal protein L10;protein_id=TMQ37193.1;transl_table=11
LNKO01000105.1	Genbank	gene	6503	6877	.	+	.	ID=gene-AO052_08320;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AO052_08320
LNKO01000105.1	Protein Homology	CDS	6503	6877	.	+	0	ID=cds-TMQ37194.1;Parent=gene-AO052_08320;Dbxref=NCBI_GP:TMQ37194.1;Name=TMQ37194.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526341.1;locus_tag=AO052_08320;product=50S ribosomal protein L7/L12;protein_id=TMQ37194.1;transl_table=11
LNKO01000105.1	Genbank	gene	7039	8409	.	+	.	ID=gene-AO052_08325;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AO052_08325
LNKO01000105.1	Protein Homology	CDS	7039	8409	.	+	0	ID=cds-TMQ37195.1;Parent=gene-AO052_08325;Dbxref=NCBI_GP:TMQ37195.1;Name=TMQ37195.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665638.1;locus_tag=AO052_08325;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=TMQ37195.1;transl_table=11
LNKO01000105.1	Genbank	gene	8449	8760	.	-	.	ID=gene-AO052_08330;Name=AO052_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08330
LNKO01000105.1	Protein Homology	CDS	8449	8760	.	-	0	ID=cds-TMQ37196.1;Parent=gene-AO052_08330;Dbxref=NCBI_GP:TMQ37196.1;Name=TMQ37196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526339.1;locus_tag=AO052_08330;product=hypothetical protein;protein_id=TMQ37196.1;transl_table=11
LNKO01000105.1	Genbank	gene	8856	8932	.	-	.	ID=gene-AO052_08335;Name=AO052_08335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_08335
LNKO01000105.1	tRNAscan-SE	tRNA	8856	8932	.	-	.	ID=rna-AO052_08335;Parent=gene-AO052_08335;anticodon=(pos:complement(8896..8898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08335;product=tRNA-Arg
LNKO01000105.1	tRNAscan-SE	exon	8856	8932	.	-	.	ID=exon-AO052_08335-1;Parent=rna-AO052_08335;anticodon=(pos:complement(8896..8898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08335;product=tRNA-Arg
LNKO01000105.1	Genbank	gene	8990	9066	.	-	.	ID=gene-AO052_08340;Name=AO052_08340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_08340
LNKO01000105.1	tRNAscan-SE	tRNA	8990	9066	.	-	.	ID=rna-AO052_08340;Parent=gene-AO052_08340;anticodon=(pos:complement(9030..9032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08340;product=tRNA-Arg
LNKO01000105.1	tRNAscan-SE	exon	8990	9066	.	-	.	ID=exon-AO052_08340-1;Parent=rna-AO052_08340;anticodon=(pos:complement(9030..9032));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08340;product=tRNA-Arg
LNKO01000105.1	Genbank	gene	9087	9180	.	-	.	ID=gene-AO052_08345;Name=AO052_08345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_08345
LNKO01000105.1	tRNAscan-SE	tRNA	9087	9180	.	-	.	ID=rna-AO052_08345;Parent=gene-AO052_08345;anticodon=(pos:complement(9143..9145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08345;product=tRNA-Ser
LNKO01000105.1	tRNAscan-SE	exon	9087	9180	.	-	.	ID=exon-AO052_08345-1;Parent=rna-AO052_08345;anticodon=(pos:complement(9143..9145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08345;product=tRNA-Ser
LNKO01000105.1	Genbank	gene	9299	10234	.	-	.	ID=gene-AO052_08350;Name=AO052_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08350
LNKO01000105.1	Protein Homology	CDS	9299	10234	.	-	0	ID=cds-TMQ37197.1;Parent=gene-AO052_08350;Dbxref=NCBI_GP:TMQ37197.1;Name=TMQ37197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672415.1;locus_tag=AO052_08350;product=hydrolase;protein_id=TMQ37197.1;transl_table=11
LNKO01000105.1	Genbank	gene	10289	11404	.	-	.	ID=gene-AO052_08355;Name=AO052_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08355
LNKO01000105.1	Protein Homology	CDS	10289	11404	.	-	0	ID=cds-TMQ37198.1;Parent=gene-AO052_08355;Dbxref=NCBI_GP:TMQ37198.1;Name=TMQ37198.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44801.1;locus_tag=AO052_08355;product=aspartate-semialdehyde dehydrogenase;protein_id=TMQ37198.1;transl_table=11
LNKO01000105.1	Genbank	gene	11570	12286	.	-	.	ID=gene-AO052_08360;Name=AO052_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08360
LNKO01000105.1	Protein Homology	CDS	11570	12286	.	-	0	ID=cds-TMQ37199.1;Parent=gene-AO052_08360;Dbxref=NCBI_GP:TMQ37199.1;Name=TMQ37199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501104.1;locus_tag=AO052_08360;product=hypothetical protein;protein_id=TMQ37199.1;transl_table=11
LNKO01000105.1	Protein Homology	pseudogene	12488	13134	.	+	.	ID=gene-AO052_08365;Name=rimO;Note=disrupted;description=ribosomal protein S12 methylthiotransferase RimO;gbkey=Gene;gene=rimO;gene_biotype=pseudogene;locus_tag=AO052_08365;pseudo=true
LNKO01000105.1	Genbank	gene	13198	13776	.	-	.	ID=gene-AO052_08370;Name=AO052_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08370
LNKO01000105.1	Protein Homology	CDS	13198	13776	.	-	0	ID=cds-TMQ37200.1;Parent=gene-AO052_08370;Dbxref=NCBI_GP:TMQ37200.1;Name=TMQ37200.1;Note=involved in drug resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44803.1;locus_tag=AO052_08370;product=NADPH quinone reductase MdaB;protein_id=TMQ37200.1;transl_table=11
LNKO01000105.1	Genbank	gene	13889	14776	.	+	.	ID=gene-AO052_08375;Name=AO052_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08375
LNKO01000105.1	Protein Homology	CDS	13889	14776	.	+	0	ID=cds-TMQ37201.1;Parent=gene-AO052_08375;Dbxref=NCBI_GP:TMQ37201.1;Name=TMQ37201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672408.1;locus_tag=AO052_08375;product=LysR family transcriptional regulator;protein_id=TMQ37201.1;transl_table=11
LNKO01000105.1	Genbank	gene	14875	16890	.	-	.	ID=gene-AO052_08380;Name=AO052_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08380
LNKO01000105.1	Protein Homology	CDS	14875	16890	.	-	0	ID=cds-TMQ37202.1;Parent=gene-AO052_08380;Dbxref=NCBI_GP:TMQ37202.1;Name=TMQ37202.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526334.1;locus_tag=AO052_08380;product=ATP-dependent DNA helicase Rep;protein_id=TMQ37202.1;transl_table=11
LNKO01000105.1	Genbank	gene	16896	17108	.	-	.	ID=gene-AO052_08385;Name=AO052_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08385
LNKO01000105.1	Protein Homology	CDS	16896	17108	.	-	0	ID=cds-TMQ37203.1;Parent=gene-AO052_08385;Dbxref=NCBI_GP:TMQ37203.1;Name=TMQ37203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526333.1;locus_tag=AO052_08385;product=hypothetical protein;protein_id=TMQ37203.1;transl_table=11
LNKO01000105.1	Genbank	gene	17105	17575	.	-	.	ID=gene-AO052_08390;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AO052_08390
LNKO01000105.1	Protein Homology	CDS	17105	17575	.	-	0	ID=cds-TMQ37204.1;Parent=gene-AO052_08390;Dbxref=NCBI_GP:TMQ37204.1;Name=TMQ37204.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638492.1;locus_tag=AO052_08390;product=phosphopantetheine adenylyltransferase;protein_id=TMQ37204.1;transl_table=11
LNKO01000105.1	Genbank	gene	17572	18855	.	-	.	ID=gene-AO052_08395;Name=AO052_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08395
LNKO01000105.1	Protein Homology	CDS	17572	18855	.	-	0	ID=cds-TMQ37205.1;Parent=gene-AO052_08395;Dbxref=NCBI_GP:TMQ37205.1;Name=TMQ37205.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44806.1;locus_tag=AO052_08395;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=TMQ37205.1;transl_table=11
LNKO01000105.1	Genbank	gene	18918	19682	.	+	.	ID=gene-AO052_08400;Name=AO052_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08400
LNKO01000105.1	Protein Homology	CDS	18918	19682	.	+	0	ID=cds-TMQ37206.1;Parent=gene-AO052_08400;Dbxref=NCBI_GP:TMQ37206.1;Name=TMQ37206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701787.1;locus_tag=AO052_08400;product=glycosyltransferase;protein_id=TMQ37206.1;transl_table=11
LNKO01000105.1	Genbank	gene	19679	20236	.	-	.	ID=gene-AO052_08405;Name=AO052_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08405
LNKO01000105.1	Protein Homology	CDS	19679	20236	.	-	0	ID=cds-TMQ37207.1;Parent=gene-AO052_08405;Dbxref=NCBI_GP:TMQ37207.1;Name=TMQ37207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654536.1;locus_tag=AO052_08405;product=DNA-3-methyladenine glycosidase;protein_id=TMQ37207.1;transl_table=11
LNKO01000105.1	Genbank	gene	20233	21051	.	-	.	ID=gene-AO052_08410;Name=AO052_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08410
LNKO01000105.1	Protein Homology	CDS	20233	21051	.	-	0	ID=cds-TMQ37208.1;Parent=gene-AO052_08410;Dbxref=NCBI_GP:TMQ37208.1;Name=TMQ37208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665181.1;locus_tag=AO052_08410;product=shikimate dehydrogenase;protein_id=TMQ37208.1;transl_table=11
LNKO01000105.1	Genbank	gene	21055	21606	.	-	.	ID=gene-AO052_08415;Name=AO052_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08415
LNKO01000105.1	Protein Homology	CDS	21055	21606	.	-	0	ID=cds-TMQ37209.1;Parent=gene-AO052_08415;Dbxref=NCBI_GP:TMQ37209.1;Name=TMQ37209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688145.1;locus_tag=AO052_08415;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=TMQ37209.1;transl_table=11
LNKO01000105.1	Genbank	gene	21622	22158	.	-	.	ID=gene-AO052_08420;Name=AO052_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08420
LNKO01000105.1	Protein Homology	CDS	21622	22158	.	-	0	ID=cds-TMQ37210.1;Parent=gene-AO052_08420;Dbxref=NCBI_GP:TMQ37210.1;Name=TMQ37210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054643.1;locus_tag=AO052_08420;product=hypothetical protein;protein_id=TMQ37210.1;transl_table=11
LNKO01000105.1	Genbank	gene	22168	24084	.	-	.	ID=gene-AO052_08425;Name=AO052_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08425
LNKO01000105.1	Protein Homology	CDS	22168	24084	.	-	0	ID=cds-TMQ37211.1;Parent=gene-AO052_08425;Dbxref=NCBI_GP:TMQ37211.1;Name=TMQ37211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629954.1;locus_tag=AO052_08425;product=ABC transporter ATP-binding protein;protein_id=TMQ37211.1;transl_table=11
LNKO01000105.1	Genbank	pseudogene	24261	24813	.	-	.	ID=gene-AO052_08430;Name=AO052_08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08430;pseudo=true
LNKO01000105.1	Protein Homology	CDS	24261	24813	.	-	1	ID=cds-AO052_08430;Parent=gene-AO052_08430;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527362.1;locus_tag=AO052_08430;pseudo=true;transl_table=11
##sequence-region LNKO01000106.1 1 10834
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000106.1	Genbank	region	1	10834	.	+	.	ID=LNKO01000106.1:1..10834;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000106.1	Protein Homology	pseudogene	1	2477	.	-	.	ID=gene-AO052_08435;Name=AO052_08435;Note=disrupted;description=ligand-gated channel protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08435;pseudo=true
LNKO01000106.1	Genbank	gene	2971	4500	.	-	.	ID=gene-AO052_08440;Name=AO052_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08440
LNKO01000106.1	Protein Homology	CDS	2971	4500	.	-	0	ID=cds-TMQ37153.1;Parent=gene-AO052_08440;Dbxref=NCBI_GP:TMQ37153.1;Name=TMQ37153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636097.1;locus_tag=AO052_08440;product=hypothetical protein;protein_id=TMQ37153.1;transl_table=11
LNKO01000106.1	Genbank	gene	4605	5537	.	-	.	ID=gene-AO052_08445;Name=AO052_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08445
LNKO01000106.1	Protein Homology	CDS	4605	5537	.	-	0	ID=cds-TMQ37154.1;Parent=gene-AO052_08445;Dbxref=NCBI_GP:TMQ37154.1;Name=TMQ37154.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692790.1;locus_tag=AO052_08445;product=carbamate kinase;protein_id=TMQ37154.1;transl_table=11
LNKO01000106.1	Genbank	gene	5547	6551	.	-	.	ID=gene-AO052_08450;Name=AO052_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08450
LNKO01000106.1	Protein Homology	CDS	5547	6551	.	-	0	ID=cds-TMQ37155.1;Parent=gene-AO052_08450;Dbxref=NCBI_GP:TMQ37155.1;Name=TMQ37155.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44770.1;locus_tag=AO052_08450;product=ornithine carbamoyltransferase;protein_id=TMQ37155.1;transl_table=11
LNKO01000106.1	Genbank	gene	6948	7766	.	+	.	ID=gene-AO052_08455;Name=AO052_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08455
LNKO01000106.1	Protein Homology	CDS	6948	7766	.	+	0	ID=cds-TMQ37156.1;Parent=gene-AO052_08455;Dbxref=NCBI_GP:TMQ37156.1;Name=TMQ37156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44771.1;locus_tag=AO052_08455;product=hypothetical protein;protein_id=TMQ37156.1;transl_table=11
LNKO01000106.1	Genbank	gene	7766	8152	.	+	.	ID=gene-AO052_08460;Name=AO052_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08460
LNKO01000106.1	Protein Homology	CDS	7766	8152	.	+	0	ID=cds-TMQ37157.1;Parent=gene-AO052_08460;Dbxref=NCBI_GP:TMQ37157.1;Name=TMQ37157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694571.1;locus_tag=AO052_08460;product=chromosome condensation protein CrcB;protein_id=TMQ37157.1;transl_table=11
LNKO01000106.1	Genbank	gene	8149	8607	.	-	.	ID=gene-AO052_08465;Name=AO052_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08465
LNKO01000106.1	Protein Homology	CDS	8149	8607	.	-	0	ID=cds-TMQ37158.1;Parent=gene-AO052_08465;Dbxref=NCBI_GP:TMQ37158.1;Name=TMQ37158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654961.1;locus_tag=AO052_08465;product=RecX family transcriptional regulator;protein_id=TMQ37158.1;transl_table=11
LNKO01000106.1	Genbank	gene	8687	9751	.	-	.	ID=gene-AO052_08470;Name=AO052_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08470
LNKO01000106.1	Protein Homology	CDS	8687	9751	.	-	0	ID=cds-TMQ37159.1;Parent=gene-AO052_08470;Dbxref=NCBI_GP:TMQ37159.1;Name=TMQ37159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651076.1;locus_tag=AO052_08470;product=DNA recombination/repair protein RecA;protein_id=TMQ37159.1;transl_table=11
LNKO01000106.1	Genbank	gene	10188	10724	.	+	.	ID=gene-AO052_08475;Name=AO052_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08475
LNKO01000106.1	Protein Homology	CDS	10188	10724	.	+	0	ID=cds-TMQ37160.1;Parent=gene-AO052_08475;Dbxref=NCBI_GP:TMQ37160.1;Name=TMQ37160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654957.1;locus_tag=AO052_08475;product=DNA transformation protein;protein_id=TMQ37160.1;transl_table=11
##sequence-region LNKO01000107.1 1 799
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000107.1	Genbank	region	1	799	.	+	.	ID=LNKO01000107.1:1..799;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000107.1	Genbank	pseudogene	1	799	.	-	.	ID=gene-AO052_08480;Name=AO052_08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08480;pseudo=true
LNKO01000107.1	Protein Homology	CDS	1	799	.	-	1	ID=cds-AO052_08480;Parent=gene-AO052_08480;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO052_08480;pseudo=true;transl_table=11
##sequence-region LNKO01000108.1 1 370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000108.1	Genbank	region	1	370	.	+	.	ID=LNKO01000108.1:1..370;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000108.1	Genbank	pseudogene	1	370	.	-	.	ID=gene-AO052_08485;Name=AO052_08485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08485;pseudo=true
LNKO01000108.1	Protein Homology	CDS	1	370	.	-	1	ID=cds-AO052_08485;Parent=gene-AO052_08485;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:YP_007111797.1;locus_tag=AO052_08485;pseudo=true;transl_table=11
##sequence-region LNKO01000109.1 1 3188
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000109.1	Genbank	region	1	3188	.	+	.	ID=LNKO01000109.1:1..3188;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000109.1	Genbank	gene	1	3114	.	-	.	ID=gene-AO052_08490;Name=AO052_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08490;partial=true;start_range=.,1
LNKO01000109.1	Protein Homology	CDS	1	3114	.	-	0	ID=cds-TMQ37065.1;Parent=gene-AO052_08490;Dbxref=NCBI_GP:TMQ37065.1;Name=TMQ37065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004532779.1;locus_tag=AO052_08490;partial=true;product=hypothetical protein;protein_id=TMQ37065.1;start_range=.,1;transl_table=11
##sequence-region LNKO01000110.1 1 913
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000110.1	Genbank	region	1	913	.	+	.	ID=LNKO01000110.1:1..913;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000110.1	Genbank	gene	348	913	.	-	.	ID=gene-AO052_08495;Name=AO052_08495;end_range=913,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08495;partial=true
LNKO01000110.1	Protein Homology	CDS	348	913	.	-	2	ID=cds-TMQ37051.1;Parent=gene-AO052_08495;Dbxref=NCBI_GP:TMQ37051.1;Name=TMQ37051.1;end_range=913,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688015.1;locus_tag=AO052_08495;partial=true;product=molybdenum-dependent transcriptional regulator;protein_id=TMQ37051.1;transl_table=11
##sequence-region LNKO01000111.1 1 3590
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000111.1	Genbank	region	1	3590	.	+	.	ID=LNKO01000111.1:1..3590;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000111.1	Genbank	pseudogene	1	197	.	-	.	ID=gene-AO052_08500;Name=AO052_08500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08500;pseudo=true
LNKO01000111.1	Protein Homology	CDS	1	197	.	-	0	ID=cds-AO052_08500;Parent=gene-AO052_08500;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628419.1;locus_tag=AO052_08500;pseudo=true;transl_table=11
LNKO01000111.1	Genbank	gene	335	1099	.	+	.	ID=gene-AO052_08505;Name=AO052_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08505
LNKO01000111.1	Protein Homology	CDS	335	1099	.	+	0	ID=cds-TMQ37044.1;Parent=gene-AO052_08505;Dbxref=NCBI_GP:TMQ37044.1;Name=TMQ37044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688013.1;locus_tag=AO052_08505;product=molybdate-binding protein;protein_id=TMQ37044.1;transl_table=11
LNKO01000111.1	Genbank	gene	1234	1962	.	+	.	ID=gene-AO052_08510;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=AO052_08510
LNKO01000111.1	Protein Homology	CDS	1234	1962	.	+	0	ID=cds-TMQ37045.1;Parent=gene-AO052_08510;Dbxref=NCBI_GP:TMQ37045.1;Name=TMQ37045.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658215.1;locus_tag=AO052_08510;product=molybdenum ABC transporter permease;protein_id=TMQ37045.1;transl_table=11
LNKO01000111.1	Genbank	gene	1949	3004	.	+	.	ID=gene-AO052_08515;Name=AO052_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08515
LNKO01000111.1	Protein Homology	CDS	1949	3004	.	+	0	ID=cds-TMQ37046.1;Parent=gene-AO052_08515;Dbxref=NCBI_GP:TMQ37046.1;Name=TMQ37046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054725.1;locus_tag=AO052_08515;product=molybdenum ABC transporter ATP-binding protein;protein_id=TMQ37046.1;transl_table=11
LNKO01000111.1	Genbank	gene	3113	3454	.	+	.	ID=gene-AO052_08520;Name=AO052_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08520
LNKO01000111.1	GeneMarkS+	CDS	3113	3454	.	+	0	ID=cds-TMQ37047.1;Parent=gene-AO052_08520;Dbxref=NCBI_GP:TMQ37047.1;Name=TMQ37047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_08520;product=hypothetical protein;protein_id=TMQ37047.1;transl_table=11
##sequence-region LNKO01000112.1 1 8252
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000112.1	Genbank	region	1	8252	.	+	.	ID=LNKO01000112.1:1..8252;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000112.1	Genbank	gene	36	686	.	+	.	ID=gene-AO052_08525;Name=AO052_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08525
LNKO01000112.1	Protein Homology	CDS	36	686	.	+	0	ID=cds-TMQ37023.1;Parent=gene-AO052_08525;Dbxref=NCBI_GP:TMQ37023.1;Name=TMQ37023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525683.1;locus_tag=AO052_08525;product=fimbrial protein;protein_id=TMQ37023.1;transl_table=11
LNKO01000112.1	Genbank	gene	765	1472	.	+	.	ID=gene-AO052_08530;Name=AO052_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08530
LNKO01000112.1	Protein Homology	CDS	765	1472	.	+	0	ID=cds-TMQ37017.1;Parent=gene-AO052_08530;Dbxref=NCBI_GP:TMQ37017.1;Name=TMQ37017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995814.1;locus_tag=AO052_08530;product=molecular chaperone;protein_id=TMQ37017.1;transl_table=11
LNKO01000112.1	Genbank	gene	1664	4246	.	+	.	ID=gene-AO052_08535;Name=AO052_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08535
LNKO01000112.1	Protein Homology	CDS	1664	4246	.	+	0	ID=cds-TMQ37018.1;Parent=gene-AO052_08535;Dbxref=NCBI_GP:TMQ37018.1;Name=TMQ37018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632577.1;locus_tag=AO052_08535;product=usher protein;protein_id=TMQ37018.1;transl_table=11
LNKO01000112.1	Genbank	gene	4247	4885	.	+	.	ID=gene-AO052_08540;Name=AO052_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08540
LNKO01000112.1	Protein Homology	CDS	4247	4885	.	+	0	ID=cds-TMQ37019.1;Parent=gene-AO052_08540;Dbxref=NCBI_GP:TMQ37019.1;Name=TMQ37019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525686.1;locus_tag=AO052_08540;product=fimbrial protein;protein_id=TMQ37019.1;transl_table=11
LNKO01000112.1	Genbank	gene	4878	5531	.	+	.	ID=gene-AO052_08545;Name=AO052_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08545
LNKO01000112.1	Protein Homology	CDS	4878	5531	.	+	0	ID=cds-TMQ37020.1;Parent=gene-AO052_08545;Dbxref=NCBI_GP:TMQ37020.1;Name=TMQ37020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525687.1;locus_tag=AO052_08545;product=fimbrial protein;protein_id=TMQ37020.1;transl_table=11
LNKO01000112.1	Genbank	gene	5524	6774	.	+	.	ID=gene-AO052_08550;Name=AO052_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08550
LNKO01000112.1	Protein Homology	CDS	5524	6774	.	+	0	ID=cds-TMQ37021.1;Parent=gene-AO052_08550;Dbxref=NCBI_GP:TMQ37021.1;Name=TMQ37021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525688.1;locus_tag=AO052_08550;product=fimbrial protein;protein_id=TMQ37021.1;transl_table=11
LNKO01000112.1	Protein Homology	pseudogene	6972	7452	.	-	.	ID=gene-AO052_08555;Name=AO052_08555;Note=disrupted;description=transporter;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08555;pseudo=true
LNKO01000112.1	Genbank	gene	7510	8145	.	-	.	ID=gene-AO052_08560;Name=AO052_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08560
LNKO01000112.1	Protein Homology	CDS	7510	8145	.	-	0	ID=cds-TMQ37022.1;Parent=gene-AO052_08560;Dbxref=NCBI_GP:TMQ37022.1;Name=TMQ37022.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689727.1;locus_tag=AO052_08560;product=endonuclease III;protein_id=TMQ37022.1;transl_table=11
##sequence-region LNKO01000113.1 1 5195
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000113.1	Genbank	region	1	5195	.	+	.	ID=LNKO01000113.1:1..5195;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000113.1	Genbank	gene	14	721	.	-	.	ID=gene-AO052_08565;Name=AO052_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08565
LNKO01000113.1	Protein Homology	CDS	14	721	.	-	0	ID=cds-TMQ36965.1;Parent=gene-AO052_08565;Dbxref=NCBI_GP:TMQ36965.1;Name=TMQ36965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57020.1;locus_tag=AO052_08565;product=elongation factor G;protein_id=TMQ36965.1;transl_table=11
LNKO01000113.1	Genbank	gene	723	1346	.	-	.	ID=gene-AO052_08570;Name=AO052_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08570
LNKO01000113.1	Protein Homology	CDS	723	1346	.	-	0	ID=cds-TMQ36966.1;Parent=gene-AO052_08570;Dbxref=NCBI_GP:TMQ36966.1;Name=TMQ36966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642401.1;locus_tag=AO052_08570;product=electron transport complex subunit G;protein_id=TMQ36966.1;transl_table=11
LNKO01000113.1	Genbank	gene	1346	2422	.	-	.	ID=gene-AO052_08575;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=AO052_08575
LNKO01000113.1	Protein Homology	CDS	1346	2422	.	-	0	ID=cds-TMQ36967.1;Parent=gene-AO052_08575;Dbxref=NCBI_GP:TMQ36967.1;Name=TMQ36967.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658204.1;locus_tag=AO052_08575;product=electron transporter RnfD;protein_id=TMQ36967.1;transl_table=11
LNKO01000113.1	Genbank	gene	2427	4379	.	-	.	ID=gene-AO052_08580;Name=AO052_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08580
LNKO01000113.1	Protein Homology	CDS	2427	4379	.	-	0	ID=cds-TMQ36968.1;Parent=gene-AO052_08580;Dbxref=NCBI_GP:TMQ36968.1;Name=TMQ36968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525692.1;locus_tag=AO052_08580;product=electron transporter RnfC;protein_id=TMQ36968.1;transl_table=11
LNKO01000113.1	Genbank	gene	4380	4961	.	-	.	ID=gene-AO052_08585;Name=AO052_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08585
LNKO01000113.1	Protein Homology	CDS	4380	4961	.	-	0	ID=cds-TMQ36969.1;Parent=gene-AO052_08585;Dbxref=NCBI_GP:TMQ36969.1;Name=TMQ36969.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P71396.1;locus_tag=AO052_08585;product=electron transporter RnfB;protein_id=TMQ36969.1;transl_table=11
##sequence-region LNKO01000114.1 1 6381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000114.1	Genbank	region	1	6381	.	+	.	ID=LNKO01000114.1:1..6381;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000114.1	Genbank	gene	1	432	.	-	.	ID=gene-AO052_08590;Name=AO052_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08590;partial=true;start_range=.,1
LNKO01000114.1	Protein Homology	CDS	1	432	.	-	0	ID=cds-TMQ36923.1;Parent=gene-AO052_08590;Dbxref=NCBI_GP:TMQ36923.1;Name=TMQ36923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626166.1;locus_tag=AO052_08590;partial=true;product=electron transporter RsxA;protein_id=TMQ36923.1;start_range=.,1;transl_table=11
LNKO01000114.1	Genbank	gene	641	1495	.	-	.	ID=gene-AO052_08595;Name=AO052_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08595
LNKO01000114.1	Protein Homology	CDS	641	1495	.	-	0	ID=cds-TMQ36924.1;Parent=gene-AO052_08595;Dbxref=NCBI_GP:TMQ36924.1;Name=TMQ36924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995825.1;locus_tag=AO052_08595;product=plastocyanin;protein_id=TMQ36924.1;transl_table=11
LNKO01000114.1	Genbank	gene	1653	2714	.	-	.	ID=gene-AO052_08600;Name=AO052_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08600
LNKO01000114.1	Protein Homology	CDS	1653	2714	.	-	0	ID=cds-TMQ36925.1;Parent=gene-AO052_08600;Dbxref=NCBI_GP:TMQ36925.1;Name=TMQ36925.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691843.1;locus_tag=AO052_08600;product=peptidase;protein_id=TMQ36925.1;transl_table=11
LNKO01000114.1	Genbank	gene	2914	3579	.	+	.	ID=gene-AO052_08605;Name=AO052_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08605
LNKO01000114.1	Protein Homology	CDS	2914	3579	.	+	0	ID=cds-TMQ36926.1;Parent=gene-AO052_08605;Dbxref=NCBI_GP:TMQ36926.1;Name=TMQ36926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650041.1;locus_tag=AO052_08605;product=hypothetical protein;protein_id=TMQ36926.1;transl_table=11
LNKO01000114.1	Genbank	gene	3647	5839	.	+	.	ID=gene-AO052_08610;Name=AO052_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08610
LNKO01000114.1	Protein Homology	CDS	3647	5839	.	+	0	ID=cds-TMQ36927.1;Parent=gene-AO052_08610;Dbxref=NCBI_GP:TMQ36927.1;Name=TMQ36927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654153.1;locus_tag=AO052_08610;product=hypothetical protein;protein_id=TMQ36927.1;transl_table=11
LNKO01000114.1	Genbank	gene	5913	6381	.	-	.	ID=gene-AO052_08615;Name=AO052_08615;end_range=6381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08615;partial=true
LNKO01000114.1	Protein Homology	CDS	5913	6381	.	-	1	ID=cds-TMQ36928.1;Parent=gene-AO052_08615;Dbxref=NCBI_GP:TMQ36928.1;Name=TMQ36928.1;end_range=6381,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702472.1;locus_tag=AO052_08615;partial=true;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=TMQ36928.1;transl_table=11
##sequence-region LNKO01000115.1 1 18907
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000115.1	Genbank	region	1	18907	.	+	.	ID=LNKO01000115.1:1..18907;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000115.1	Genbank	gene	84	1019	.	-	.	ID=gene-AO052_08620;Name=AO052_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08620
LNKO01000115.1	Protein Homology	CDS	84	1019	.	-	0	ID=cds-TMQ36901.1;Parent=gene-AO052_08620;Dbxref=NCBI_GP:TMQ36901.1;Name=TMQ36901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687393.1;locus_tag=AO052_08620;product=arabinose-5-phosphate isomerase;protein_id=TMQ36901.1;transl_table=11
LNKO01000115.1	Genbank	gene	1180	1556	.	+	.	ID=gene-AO052_08695;Name=AO052_08695;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=AO052_08695
LNKO01000115.1	cmsearch	RNase_P_RNA	1180	1556	.	+	.	ID=rna-AO052_08695;Parent=gene-AO052_08695;gbkey=ncRNA;locus_tag=AO052_08695;product=bacterial RNase P
LNKO01000115.1	cmsearch	exon	1180	1556	.	+	.	ID=exon-AO052_08695-1;Parent=rna-AO052_08695;gbkey=ncRNA;locus_tag=AO052_08695;product=bacterial RNase P
LNKO01000115.1	Genbank	gene	1923	2936	.	+	.	ID=gene-AO052_08625;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AO052_08625
LNKO01000115.1	Protein Homology	CDS	1923	2936	.	+	0	ID=cds-TMQ36902.1;Parent=gene-AO052_08625;Dbxref=NCBI_GP:TMQ36902.1;Name=TMQ36902.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525696.1;locus_tag=AO052_08625;product=cyclic pyranopterin phosphate synthase MoaA;protein_id=TMQ36902.1;transl_table=11
LNKO01000115.1	Genbank	gene	3028	3510	.	+	.	ID=gene-AO052_08630;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AO052_08630
LNKO01000115.1	Protein Homology	CDS	3028	3510	.	+	0	ID=cds-TMQ36903.1;Parent=gene-AO052_08630;Dbxref=NCBI_GP:TMQ36903.1;Name=TMQ36903.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005762140.1;locus_tag=AO052_08630;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=TMQ36903.1;transl_table=11
LNKO01000115.1	Genbank	gene	3512	3757	.	+	.	ID=gene-AO052_08635;Name=AO052_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08635
LNKO01000115.1	Protein Homology	CDS	3512	3757	.	+	0	ID=cds-TMQ36904.1;Parent=gene-AO052_08635;Dbxref=NCBI_GP:TMQ36904.1;Name=TMQ36904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631889.1;locus_tag=AO052_08635;product=molybdopterin synthase sulfur carrier subunit;protein_id=TMQ36904.1;transl_table=11
LNKO01000115.1	Genbank	gene	3758	4210	.	+	.	ID=gene-AO052_08640;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AO052_08640
LNKO01000115.1	Protein Homology	CDS	3758	4210	.	+	0	ID=cds-TMQ36905.1;Parent=gene-AO052_08640;Dbxref=NCBI_GP:TMQ36905.1;Name=TMQ36905.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;inference=EXISTENCE: similar to AA sequence:SwissProt:P45308.1;locus_tag=AO052_08640;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=TMQ36905.1;transl_table=11
LNKO01000115.1	Genbank	gene	4265	6910	.	-	.	ID=gene-AO052_08645;Name=AO052_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08645
LNKO01000115.1	Protein Homology	CDS	4265	6910	.	-	0	ID=cds-TMQ36906.1;Parent=gene-AO052_08645;Dbxref=NCBI_GP:TMQ36906.1;Name=TMQ36906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995833.1;locus_tag=AO052_08645;product=hypothetical protein;protein_id=TMQ36906.1;transl_table=11
LNKO01000115.1	Genbank	gene	6894	8144	.	-	.	ID=gene-AO052_08650;Name=AO052_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08650
LNKO01000115.1	Protein Homology	CDS	6894	8144	.	-	0	ID=cds-TMQ36907.1;Parent=gene-AO052_08650;Dbxref=NCBI_GP:TMQ36907.1;Name=TMQ36907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657684.1;locus_tag=AO052_08650;product=hypothetical protein;protein_id=TMQ36907.1;transl_table=11
LNKO01000115.1	Genbank	gene	8329	8967	.	+	.	ID=gene-AO052_08655;Name=AO052_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08655
LNKO01000115.1	Protein Homology	CDS	8329	8967	.	+	0	ID=cds-TMQ36908.1;Parent=gene-AO052_08655;Dbxref=NCBI_GP:TMQ36908.1;Name=TMQ36908.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44286.3;locus_tag=AO052_08655;product=prop expression regulator;protein_id=TMQ36908.1;transl_table=11
LNKO01000115.1	Genbank	gene	8995	11076	.	+	.	ID=gene-AO052_08660;Name=AO052_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08660
LNKO01000115.1	Protein Homology	CDS	8995	11076	.	+	0	ID=cds-TMQ36909.1;Parent=gene-AO052_08660;Dbxref=NCBI_GP:TMQ36909.1;Name=TMQ36909.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659693.1;locus_tag=AO052_08660;product=carboxy-terminal protease;protein_id=TMQ36909.1;transl_table=11
LNKO01000115.1	Genbank	gene	11150	12619	.	+	.	ID=gene-AO052_08665;Name=AO052_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08665
LNKO01000115.1	Protein Homology	CDS	11150	12619	.	+	0	ID=cds-TMQ36910.1;Parent=gene-AO052_08665;Dbxref=NCBI_GP:TMQ36910.1;Name=TMQ36910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550681.1;locus_tag=AO052_08665;product=L%2CD-transpeptidase;protein_id=TMQ36910.1;transl_table=11
LNKO01000115.1	Genbank	gene	12635	13195	.	+	.	ID=gene-AO052_08670;Name=AO052_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08670
LNKO01000115.1	Protein Homology	CDS	12635	13195	.	+	0	ID=cds-TMQ36911.1;Parent=gene-AO052_08670;Dbxref=NCBI_GP:TMQ36911.1;Name=TMQ36911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664987.1;locus_tag=AO052_08670;product=hypothetical protein;protein_id=TMQ36911.1;transl_table=11
LNKO01000115.1	Genbank	gene	13247	14002	.	+	.	ID=gene-AO052_08675;Name=AO052_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08675
LNKO01000115.1	Protein Homology	CDS	13247	14002	.	+	0	ID=cds-TMQ36912.1;Parent=gene-AO052_08675;Dbxref=NCBI_GP:TMQ36912.1;Name=TMQ36912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525702.1;locus_tag=AO052_08675;product=deoxyribonuclease;protein_id=TMQ36912.1;transl_table=11
LNKO01000115.1	Genbank	gene	14012	14650	.	+	.	ID=gene-AO052_08680;Name=AO052_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08680
LNKO01000115.1	Protein Homology	CDS	14012	14650	.	+	0	ID=cds-TMQ36913.1;Parent=gene-AO052_08680;Dbxref=NCBI_GP:TMQ36913.1;Name=TMQ36913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691873.1;locus_tag=AO052_08680;product=MBL fold metallo-hydrolase;protein_id=TMQ36913.1;transl_table=11
LNKO01000115.1	Genbank	gene	14860	17667	.	+	.	ID=gene-AO052_08685;Name=AO052_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08685
LNKO01000115.1	Protein Homology	CDS	14860	17667	.	+	0	ID=cds-TMQ36914.1;Parent=gene-AO052_08685;Dbxref=NCBI_GP:TMQ36914.1;Name=TMQ36914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702461.1;locus_tag=AO052_08685;product=2-oxoglutarate dehydrogenase subunit E1;protein_id=TMQ36914.1;transl_table=11
LNKO01000115.1	Genbank	gene	17772	18907	.	+	.	ID=gene-AO052_08690;Name=AO052_08690;end_range=18907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08690;partial=true
LNKO01000115.1	Protein Homology	CDS	17772	18907	.	+	0	ID=cds-TMQ36915.1;Parent=gene-AO052_08690;Dbxref=NCBI_GP:TMQ36915.1;Name=TMQ36915.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;end_range=18907,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654196.1;locus_tag=AO052_08690;partial=true;product=dihydrolipoamide succinyltransferase;protein_id=TMQ36915.1;transl_table=11
##sequence-region LNKO01000116.1 1 34426
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000116.1	Genbank	region	1	34426	.	+	.	ID=LNKO01000116.1:1..34426;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000116.1	Genbank	gene	208	1338	.	-	.	ID=gene-AO052_08700;Name=AO052_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08700
LNKO01000116.1	Protein Homology	CDS	208	1338	.	-	0	ID=cds-TMQ36840.1;Parent=gene-AO052_08700;Dbxref=NCBI_GP:TMQ36840.1;Name=TMQ36840.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659688.1;locus_tag=AO052_08700;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=TMQ36840.1;transl_table=11
LNKO01000116.1	Genbank	gene	1481	3751	.	-	.	ID=gene-AO052_08705;Name=AO052_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08705
LNKO01000116.1	Protein Homology	CDS	1481	3751	.	-	0	ID=cds-TMQ36841.1;Parent=gene-AO052_08705;Dbxref=NCBI_GP:TMQ36841.1;Name=TMQ36841.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=AO052_08705;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TMQ36841.1;transl_table=11
LNKO01000116.1	Genbank	gene	4006	4587	.	-	.	ID=gene-AO052_08710;Name=AO052_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08710
LNKO01000116.1	Protein Homology	CDS	4006	4587	.	-	0	ID=cds-TMQ36842.1;Parent=gene-AO052_08710;Dbxref=NCBI_GP:TMQ36842.1;Name=TMQ36842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961885.1;locus_tag=AO052_08710;product=hypothetical protein;protein_id=TMQ36842.1;transl_table=11
LNKO01000116.1	Genbank	gene	4644	5228	.	-	.	ID=gene-AO052_08715;Name=AO052_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08715
LNKO01000116.1	Protein Homology	CDS	4644	5228	.	-	0	ID=cds-TMQ36843.1;Parent=gene-AO052_08715;Dbxref=NCBI_GP:TMQ36843.1;Name=TMQ36843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P52606.2;locus_tag=AO052_08715;product=hypothetical protein;protein_id=TMQ36843.1;transl_table=11
LNKO01000116.1	Genbank	gene	5241	5600	.	-	.	ID=gene-AO052_08720;Name=AO052_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08720
LNKO01000116.1	Protein Homology	CDS	5241	5600	.	-	0	ID=cds-TMQ36844.1;Parent=gene-AO052_08720;Dbxref=NCBI_GP:TMQ36844.1;Name=TMQ36844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702458.1;locus_tag=AO052_08720;product=hypothetical protein;protein_id=TMQ36844.1;transl_table=11
LNKO01000116.1	Genbank	gene	5600	7327	.	-	.	ID=gene-AO052_08725;Name=AO052_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08725
LNKO01000116.1	Protein Homology	CDS	5600	7327	.	-	0	ID=cds-TMQ36845.1;Parent=gene-AO052_08725;Dbxref=NCBI_GP:TMQ36845.1;Name=TMQ36845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645073.1;locus_tag=AO052_08725;product=penicillin-binding protein;protein_id=TMQ36845.1;transl_table=11
LNKO01000116.1	Genbank	gene	7399	8250	.	+	.	ID=gene-AO052_08730;Name=AO052_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08730
LNKO01000116.1	Protein Homology	CDS	7399	8250	.	+	0	ID=cds-TMQ36846.1;Parent=gene-AO052_08730;Dbxref=NCBI_GP:TMQ36846.1;Name=TMQ36846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632528.1;locus_tag=AO052_08730;product=tetrapyrrole methylase;protein_id=TMQ36846.1;transl_table=11
LNKO01000116.1	Genbank	gene	8352	9800	.	+	.	ID=gene-AO052_08735;Name=AO052_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08735
LNKO01000116.1	Protein Homology	CDS	8352	9800	.	+	0	ID=cds-TMQ36847.1;Parent=gene-AO052_08735;Dbxref=NCBI_GP:TMQ36847.1;Name=TMQ36847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45297.1;locus_tag=AO052_08735;product=protein TldD;protein_id=TMQ36847.1;transl_table=11
LNKO01000116.1	Genbank	gene	9916	10467	.	+	.	ID=gene-AO052_08740;Name=AO052_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08740
LNKO01000116.1	Protein Homology	CDS	9916	10467	.	+	0	ID=cds-TMQ36848.1;Parent=gene-AO052_08740;Dbxref=NCBI_GP:TMQ36848.1;Name=TMQ36848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667211.1;locus_tag=AO052_08740;product=endopeptidase;protein_id=TMQ36848.1;transl_table=11
LNKO01000116.1	Genbank	gene	10592	10816	.	-	.	ID=gene-AO052_08745;Name=AO052_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08745
LNKO01000116.1	Protein Homology	CDS	10592	10816	.	-	0	ID=cds-TMQ36849.1;Parent=gene-AO052_08745;Dbxref=NCBI_GP:TMQ36849.1;Name=TMQ36849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657643.1;locus_tag=AO052_08745;product=transposase;protein_id=TMQ36849.1;transl_table=11
LNKO01000116.1	Protein Homology	pseudogene	11081	11292	.	+	.	ID=gene-AO052_08750;Name=AO052_08750;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08750;pseudo=true
LNKO01000116.1	Genbank	gene	11408	11518	.	-	.	ID=gene-AO052_08755;Name=AO052_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08755
LNKO01000116.1	Protein Homology	CDS	11408	11518	.	-	0	ID=cds-TMQ36850.1;Parent=gene-AO052_08755;Dbxref=NCBI_GP:TMQ36850.1;Name=TMQ36850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44281.1;locus_tag=AO052_08755;product=hypothetical protein;protein_id=TMQ36850.1;transl_table=11
LNKO01000116.1	Genbank	gene	11778	13472	.	+	.	ID=gene-AO052_08760;Name=AO052_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08760
LNKO01000116.1	Protein Homology	CDS	11778	13472	.	+	0	ID=cds-TMQ36851.1;Parent=gene-AO052_08760;Dbxref=NCBI_GP:TMQ36851.1;Name=TMQ36851.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650117.1;locus_tag=AO052_08760;product=lactate dehydrogenase;protein_id=TMQ36851.1;transl_table=11
LNKO01000116.1	Genbank	gene	14021	14599	.	-	.	ID=gene-AO052_08765;Name=AO052_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08765
LNKO01000116.1	Protein Homology	CDS	14021	14599	.	-	0	ID=cds-TMQ36852.1;Parent=gene-AO052_08765;Dbxref=NCBI_GP:TMQ36852.1;Name=TMQ36852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525713.1;locus_tag=AO052_08765;product=glutamine amidotransferase;protein_id=TMQ36852.1;transl_table=11
LNKO01000116.1	Genbank	gene	14600	15475	.	-	.	ID=gene-AO052_08770;Name=AO052_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08770
LNKO01000116.1	Protein Homology	CDS	14600	15475	.	-	0	ID=cds-TMQ36853.1;Parent=gene-AO052_08770;Dbxref=NCBI_GP:TMQ36853.1;Name=TMQ36853.1;Note=with PdxT forms pyridoxal 5'-phosphate from glutamine%2C either ribose 5-phosphate or ribulose 5-phosphate%2C and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UF86.1;locus_tag=AO052_08770;product=pyridoxal biosynthesis lyase PdxS;protein_id=TMQ36853.1;transl_table=11
LNKO01000116.1	Genbank	gene	15983	16660	.	+	.	ID=gene-AO052_08775;Name=AO052_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08775
LNKO01000116.1	Protein Homology	CDS	15983	16660	.	+	0	ID=cds-TMQ36854.1;Parent=gene-AO052_08775;Dbxref=NCBI_GP:TMQ36854.1;Name=TMQ36854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650123.1;locus_tag=AO052_08775;product=cytidylate kinase;protein_id=TMQ36854.1;transl_table=11
LNKO01000116.1	Genbank	gene	16757	18406	.	+	.	ID=gene-AO052_08780;Name=AO052_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08780
LNKO01000116.1	Protein Homology	CDS	16757	18406	.	+	0	ID=cds-TMQ36855.1;Parent=gene-AO052_08780;Dbxref=NCBI_GP:TMQ36855.1;Name=TMQ36855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716621.1;locus_tag=AO052_08780;product=30S ribosomal protein S1;protein_id=TMQ36855.1;transl_table=11
LNKO01000116.1	Genbank	gene	18529	18813	.	+	.	ID=gene-AO052_08785;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AO052_08785
LNKO01000116.1	Protein Homology	CDS	18529	18813	.	+	0	ID=cds-TMQ36856.1;Parent=gene-AO052_08785;Dbxref=NCBI_GP:TMQ36856.1;Name=TMQ36856.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005683713.1;locus_tag=AO052_08785;product=integration host factor subunit beta;protein_id=TMQ36856.1;transl_table=11
LNKO01000116.1	Genbank	gene	18888	19181	.	+	.	ID=gene-AO052_08790;Name=AO052_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08790
LNKO01000116.1	Protein Homology	CDS	18888	19181	.	+	0	ID=cds-TMQ36857.1;Parent=gene-AO052_08790;Dbxref=NCBI_GP:TMQ36857.1;Name=TMQ36857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691896.1;locus_tag=AO052_08790;product=hypothetical protein;protein_id=TMQ36857.1;transl_table=11
LNKO01000116.1	Genbank	gene	19181	20371	.	+	.	ID=gene-AO052_08795;Name=AO052_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08795
LNKO01000116.1	Protein Homology	CDS	19181	20371	.	+	0	ID=cds-TMQ36858.1;Parent=gene-AO052_08795;Dbxref=NCBI_GP:TMQ36858.1;Name=TMQ36858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44130.1;locus_tag=AO052_08795;product=hypothetical protein;protein_id=TMQ36858.1;transl_table=11
LNKO01000116.1	Genbank	gene	20395	21087	.	+	.	ID=gene-AO052_08800;Name=AO052_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08800
LNKO01000116.1	Protein Homology	CDS	20395	21087	.	+	0	ID=cds-TMQ36859.1;Parent=gene-AO052_08800;Dbxref=NCBI_GP:TMQ36859.1;Name=TMQ36859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691900.1;locus_tag=AO052_08800;product=orotidine 5'-phosphate decarboxylase;protein_id=TMQ36859.1;transl_table=11
LNKO01000116.1	Genbank	gene	21094	21414	.	+	.	ID=gene-AO052_08805;Name=AO052_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08805
LNKO01000116.1	Protein Homology	CDS	21094	21414	.	+	0	ID=cds-TMQ36860.1;Parent=gene-AO052_08805;Dbxref=NCBI_GP:TMQ36860.1;Name=TMQ36860.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650140.1;locus_tag=AO052_08805;product=translation initiation factor Sui1;protein_id=TMQ36860.1;transl_table=11
LNKO01000116.1	Genbank	gene	21443	22138	.	-	.	ID=gene-AO052_08810;Name=AO052_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08810
LNKO01000116.1	Protein Homology	CDS	21443	22138	.	-	0	ID=cds-TMQ36861.1;Parent=gene-AO052_08810;Dbxref=NCBI_GP:TMQ36861.1;Name=TMQ36861.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961892.1;locus_tag=AO052_08810;product=DnaA regulatory inactivator Hda;protein_id=TMQ36861.1;transl_table=11
LNKO01000116.1	Genbank	gene	22204	23448	.	-	.	ID=gene-AO052_08815;Name=AO052_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08815
LNKO01000116.1	Protein Homology	CDS	22204	23448	.	-	0	ID=cds-TMQ36862.1;Parent=gene-AO052_08815;Dbxref=NCBI_GP:TMQ36862.1;Name=TMQ36862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687348.1;locus_tag=AO052_08815;product=uracil transporter;protein_id=TMQ36862.1;transl_table=11
LNKO01000116.1	Genbank	gene	23552	24178	.	-	.	ID=gene-AO052_08820;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AO052_08820
LNKO01000116.1	Protein Homology	CDS	23552	24178	.	-	0	ID=cds-TMQ36863.1;Parent=gene-AO052_08820;Dbxref=NCBI_GP:TMQ36863.1;Name=TMQ36863.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:P43857.1;locus_tag=AO052_08820;product=uracil phosphoribosyltransferase;protein_id=TMQ36863.1;transl_table=11
LNKO01000116.1	Genbank	gene	24302	26368	.	-	.	ID=gene-AO052_08825;Name=AO052_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08825
LNKO01000116.1	Protein Homology	CDS	24302	26368	.	-	0	ID=cds-TMQ36864.1;Parent=gene-AO052_08825;Dbxref=NCBI_GP:TMQ36864.1;Name=TMQ36864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43746.1;locus_tag=AO052_08825;product=DNA polymerase III subunit gamma/tau;protein_id=TMQ36864.1;transl_table=11
LNKO01000116.1	Genbank	gene	26380	26922	.	-	.	ID=gene-AO052_08830;Name=AO052_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08830
LNKO01000116.1	Protein Homology	CDS	26380	26922	.	-	0	ID=cds-TMQ36865.1;Parent=gene-AO052_08830;Dbxref=NCBI_GP:TMQ36865.1;Name=TMQ36865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550691.1;locus_tag=AO052_08830;product=adenine phosphoribosyltransferase;protein_id=TMQ36865.1;transl_table=11
LNKO01000116.1	Genbank	gene	27081	28505	.	-	.	ID=gene-AO052_08835;Name=AO052_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08835
LNKO01000116.1	Protein Homology	CDS	27081	28505	.	-	0	ID=cds-TMQ36866.1;Parent=gene-AO052_08835;Dbxref=NCBI_GP:TMQ36866.1;Name=TMQ36866.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272714.1;locus_tag=AO052_08835;product=dihydrolipoamide dehydrogenase;protein_id=TMQ36866.1;transl_table=11
LNKO01000116.1	Genbank	gene	28619	30265	.	-	.	ID=gene-AO052_08840;Name=AO052_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08840
LNKO01000116.1	Protein Homology	CDS	28619	30265	.	-	0	ID=cds-TMQ36867.1;Parent=gene-AO052_08840;Dbxref=NCBI_GP:TMQ36867.1;Name=TMQ36867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45118.1;locus_tag=AO052_08840;product=dihydrolipoamide acetyltransferase;protein_id=TMQ36867.1;transl_table=11
LNKO01000116.1	Genbank	gene	30328	32988	.	-	.	ID=gene-AO052_08845;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AO052_08845
LNKO01000116.1	Protein Homology	CDS	30328	32988	.	-	0	ID=cds-TMQ36868.1;Parent=gene-AO052_08845;Dbxref=NCBI_GP:TMQ36868.1;Name=TMQ36868.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995863.1;locus_tag=AO052_08845;product=pyruvate dehydrogenase;protein_id=TMQ36868.1;transl_table=11
LNKO01000116.1	Genbank	gene	33289	33747	.	+	.	ID=gene-AO052_08850;Name=AO052_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08850
LNKO01000116.1	Protein Homology	CDS	33289	33747	.	+	0	ID=cds-TMQ36869.1;Parent=gene-AO052_08850;Dbxref=NCBI_GP:TMQ36869.1;Name=TMQ36869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630761.1;locus_tag=AO052_08850;product=methylglyoxal synthase;protein_id=TMQ36869.1;transl_table=11
LNKO01000116.1	Genbank	pseudogene	33892	34426	.	-	.	ID=gene-AO052_08855;Name=AO052_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08855;pseudo=true
LNKO01000116.1	Protein Homology	CDS	33892	34426	.	-	1	ID=cds-AO052_08855;Parent=gene-AO052_08855;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961898.1;locus_tag=AO052_08855;pseudo=true;transl_table=11
##sequence-region LNKO01000117.1 1 19515
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000117.1	Genbank	region	1	19515	.	+	.	ID=LNKO01000117.1:1..19515;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000117.1	Genbank	pseudogene	1	906	.	-	.	ID=gene-AO052_08860;Name=AO052_08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08860;pseudo=true
LNKO01000117.1	Protein Homology	CDS	1	906	.	-	0	ID=cds-AO052_08860;Parent=gene-AO052_08860;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670447.1;locus_tag=AO052_08860;pseudo=true;transl_table=11
LNKO01000117.1	Genbank	gene	1172	3079	.	+	.	ID=gene-AO052_08865;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AO052_08865
LNKO01000117.1	Protein Homology	CDS	1172	3079	.	+	0	ID=cds-TMQ36773.1;Parent=gene-AO052_08865;Dbxref=NCBI_GP:TMQ36773.1;Name=TMQ36773.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670448.1;locus_tag=AO052_08865;product=molecular chaperone DnaK;protein_id=TMQ36773.1;transl_table=11
LNKO01000117.1	Genbank	gene	3166	4311	.	+	.	ID=gene-AO052_08870;Name=AO052_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08870
LNKO01000117.1	Protein Homology	CDS	3166	4311	.	+	0	ID=cds-TMQ36783.1;Parent=gene-AO052_08870;Dbxref=NCBI_GP:TMQ36783.1;Name=TMQ36783.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525724.1;locus_tag=AO052_08870;product=molecular chaperone DnaJ;protein_id=TMQ36783.1;transl_table=11
LNKO01000117.1	Genbank	gene	4390	5499	.	-	.	ID=gene-AO052_08875;Name=AO052_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08875
LNKO01000117.1	Protein Homology	CDS	4390	5499	.	-	0	ID=cds-TMQ36774.1;Parent=gene-AO052_08875;Dbxref=NCBI_GP:TMQ36774.1;Name=TMQ36774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525725.1;locus_tag=AO052_08875;product=gamma-glutamyl-phosphate reductase;protein_id=TMQ36774.1;transl_table=11
LNKO01000117.1	Genbank	gene	5520	6182	.	-	.	ID=gene-AO052_08880;Name=AO052_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08880
LNKO01000117.1	Protein Homology	CDS	5520	6182	.	-	0	ID=cds-TMQ36775.1;Parent=gene-AO052_08880;Dbxref=NCBI_GP:TMQ36775.1;Name=TMQ36775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652973.1;locus_tag=AO052_08880;product=hypothetical protein;protein_id=TMQ36775.1;transl_table=11
LNKO01000117.1	Genbank	gene	6280	7080	.	+	.	ID=gene-AO052_08885;Name=AO052_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08885
LNKO01000117.1	Protein Homology	CDS	6280	7080	.	+	0	ID=cds-TMQ36776.1;Parent=gene-AO052_08885;Dbxref=NCBI_GP:TMQ36776.1;Name=TMQ36776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646555.1;locus_tag=AO052_08885;product=hypothetical protein;protein_id=TMQ36776.1;transl_table=11
LNKO01000117.1	Genbank	gene	7112	8308	.	-	.	ID=gene-AO052_08890;Name=AO052_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08890
LNKO01000117.1	Protein Homology	CDS	7112	8308	.	-	0	ID=cds-TMQ36777.1;Parent=gene-AO052_08890;Dbxref=NCBI_GP:TMQ36777.1;Name=TMQ36777.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657593.1;locus_tag=AO052_08890;product=bicyclomycin/multidrug efflux system;protein_id=TMQ36777.1;transl_table=11
LNKO01000117.1	Genbank	gene	8310	9008	.	-	.	ID=gene-AO052_08895;Name=AO052_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08895
LNKO01000117.1	Protein Homology	CDS	8310	9008	.	-	0	ID=cds-TMQ36778.1;Parent=gene-AO052_08895;Dbxref=NCBI_GP:TMQ36778.1;Name=TMQ36778.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995871.1;locus_tag=AO052_08895;product=16S rRNA pseudouridine(516) synthase;protein_id=TMQ36778.1;transl_table=11
LNKO01000117.1	Genbank	gene	9099	9719	.	-	.	ID=gene-AO052_08900;Name=AO052_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08900
LNKO01000117.1	Protein Homology	CDS	9099	9719	.	-	0	ID=cds-TMQ36779.1;Parent=gene-AO052_08900;Dbxref=NCBI_GP:TMQ36779.1;Name=TMQ36779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692328.1;locus_tag=AO052_08900;product=hypothetical protein;protein_id=TMQ36779.1;transl_table=11
LNKO01000117.1	Genbank	gene	9916	12186	.	+	.	ID=gene-AO052_08905;Name=AO052_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08905
LNKO01000117.1	Protein Homology	CDS	9916	12186	.	+	0	ID=cds-TMQ36780.1;Parent=gene-AO052_08905;Dbxref=NCBI_GP:TMQ36780.1;Name=TMQ36780.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995873.1;locus_tag=AO052_08905;product=malic enzyme;protein_id=TMQ36780.1;transl_table=11
LNKO01000117.1	Genbank	gene	12455	14380	.	+	.	ID=gene-AO052_08910;Name=AO052_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08910
LNKO01000117.1	Protein Homology	CDS	12455	14380	.	+	0	ID=cds-TMQ36781.1;Parent=gene-AO052_08910;Dbxref=NCBI_GP:TMQ36781.1;Name=TMQ36781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702143.1;locus_tag=AO052_08910;product=hypothetical protein;protein_id=TMQ36781.1;transl_table=11
LNKO01000117.1	Genbank	gene	14411	16450	.	-	.	ID=gene-AO052_08915;Name=AO052_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08915
LNKO01000117.1	Protein Homology	CDS	14411	16450	.	-	0	ID=cds-TMQ36782.1;Parent=gene-AO052_08915;Dbxref=NCBI_GP:TMQ36782.1;Name=TMQ36782.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628806.1;locus_tag=AO052_08915;product=excinuclease ABC subunit B;protein_id=TMQ36782.1;transl_table=11
LNKO01000117.1	Genbank	gene	16869	16944	.	-	.	ID=gene-AO052_08920;Name=AO052_08920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_08920
LNKO01000117.1	tRNAscan-SE	tRNA	16869	16944	.	-	.	ID=rna-AO052_08920;Parent=gene-AO052_08920;anticodon=(pos:complement(16909..16911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08920;product=tRNA-Asn
LNKO01000117.1	tRNAscan-SE	exon	16869	16944	.	-	.	ID=exon-AO052_08920-1;Parent=rna-AO052_08920;anticodon=(pos:complement(16909..16911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_08920;product=tRNA-Asn
LNKO01000117.1	Genbank	pseudogene	17269	19515	.	+	.	ID=gene-AO052_08925;Name=AO052_08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08925;pseudo=true
LNKO01000117.1	Protein Homology	CDS	17269	19515	.	+	0	ID=cds-AO052_08925;Parent=gene-AO052_08925;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO052_08925;pseudo=true;transl_table=11
##sequence-region LNKO01000118.1 1 3351
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000118.1	Genbank	region	1	3351	.	+	.	ID=LNKO01000118.1:1..3351;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000118.1	Genbank	gene	110	514	.	+	.	ID=gene-AO052_08930;Name=AO052_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08930
LNKO01000118.1	Protein Homology	CDS	110	514	.	+	0	ID=cds-TMQ36724.1;Parent=gene-AO052_08930;Dbxref=NCBI_GP:TMQ36724.1;Name=TMQ36724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688158.1;locus_tag=AO052_08930;product=ABC transporter;protein_id=TMQ36724.1;transl_table=11
LNKO01000118.1	Genbank	gene	487	1071	.	+	.	ID=gene-AO052_08935;Name=AO052_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08935
LNKO01000118.1	Protein Homology	CDS	487	1071	.	+	0	ID=cds-TMQ36725.1;Parent=gene-AO052_08935;Dbxref=NCBI_GP:TMQ36725.1;Name=TMQ36725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45167.1;locus_tag=AO052_08935;product=hypothetical protein;protein_id=TMQ36725.1;transl_table=11
LNKO01000118.1	Genbank	gene	1434	1751	.	-	.	ID=gene-AO052_08940;Name=AO052_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08940
LNKO01000118.1	Protein Homology	CDS	1434	1751	.	-	0	ID=cds-TMQ36728.1;Parent=gene-AO052_08940;Dbxref=NCBI_GP:TMQ36728.1;Name=TMQ36728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996076.1;locus_tag=AO052_08940;product=hemocin immunity protein;protein_id=TMQ36728.1;transl_table=11
LNKO01000118.1	Genbank	gene	2098	2805	.	-	.	ID=gene-AO052_08945;Name=AO052_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08945
LNKO01000118.1	Protein Homology	CDS	2098	2805	.	-	0	ID=cds-TMQ36726.1;Parent=gene-AO052_08945;Dbxref=NCBI_GP:TMQ36726.1;Name=TMQ36726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996074.1;locus_tag=AO052_08945;product=ABC transporter;protein_id=TMQ36726.1;transl_table=11
LNKO01000118.1	Genbank	gene	2980	3351	.	-	.	ID=gene-AO052_08950;Name=AO052_08950;end_range=3351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08950;partial=true
LNKO01000118.1	Protein Homology	CDS	2980	3351	.	-	0	ID=cds-TMQ36727.1;Parent=gene-AO052_08950;Dbxref=NCBI_GP:TMQ36727.1;Name=TMQ36727.1;end_range=3351,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996073.1;locus_tag=AO052_08950;partial=true;product=hemin receptor;protein_id=TMQ36727.1;transl_table=11
##sequence-region LNKO01000119.1 1 1863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000119.1	Genbank	region	1	1863	.	+	.	ID=LNKO01000119.1:1..1863;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000119.1	Protein Homology	pseudogene	11	633	.	-	.	ID=gene-AO052_08955;Name=AO052_08955;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_08955;pseudo=true
##sequence-region LNKO01000120.1 1 8685
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000120.1	Genbank	region	1	8685	.	+	.	ID=LNKO01000120.1:1..8685;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000120.1	Genbank	gene	1	565	.	-	.	ID=gene-AO052_08960;Name=AO052_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08960;partial=true;start_range=.,1
LNKO01000120.1	Protein Homology	CDS	1	565	.	-	0	ID=cds-TMQ36674.1;Parent=gene-AO052_08960;Dbxref=NCBI_GP:TMQ36674.1;Name=TMQ36674.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45148.1;locus_tag=AO052_08960;partial=true;product=carbonic anhydrase;protein_id=TMQ36674.1;start_range=.,1;transl_table=11
LNKO01000120.1	Genbank	gene	641	2044	.	-	.	ID=gene-AO052_08965;Name=AO052_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08965
LNKO01000120.1	Protein Homology	CDS	641	2044	.	-	0	ID=cds-TMQ36675.1;Parent=gene-AO052_08965;Dbxref=NCBI_GP:TMQ36675.1;Name=TMQ36675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995950.1;locus_tag=AO052_08965;product=asparaginyl- tRNA synthetase;protein_id=TMQ36675.1;transl_table=11
LNKO01000120.1	Genbank	gene	2271	2744	.	+	.	ID=gene-AO052_08970;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AO052_08970
LNKO01000120.1	Protein Homology	CDS	2271	2744	.	+	0	ID=cds-TMQ36676.1;Parent=gene-AO052_08970;Dbxref=NCBI_GP:TMQ36676.1;Name=TMQ36676.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKN2.1;locus_tag=AO052_08970;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TMQ36676.1;transl_table=11
LNKO01000120.1	Genbank	gene	2748	3182	.	+	.	ID=gene-AO052_08975;Name=AO052_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08975
LNKO01000120.1	Protein Homology	CDS	2748	3182	.	+	0	ID=cds-TMQ36677.1;Parent=gene-AO052_08975;Dbxref=NCBI_GP:TMQ36677.1;Name=TMQ36677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702186.1;locus_tag=AO052_08975;product=N utilization substance protein B;protein_id=TMQ36677.1;transl_table=11
LNKO01000120.1	Genbank	gene	3249	4235	.	+	.	ID=gene-AO052_08980;Name=AO052_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08980
LNKO01000120.1	Protein Homology	CDS	3249	4235	.	+	0	ID=cds-TMQ36678.1;Parent=gene-AO052_08980;Dbxref=NCBI_GP:TMQ36678.1;Name=TMQ36678.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652864.1;locus_tag=AO052_08980;product=thiamine monophosphate kinase;protein_id=TMQ36678.1;transl_table=11
LNKO01000120.1	Genbank	gene	4232	4723	.	+	.	ID=gene-AO052_08985;Name=AO052_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08985
LNKO01000120.1	Protein Homology	CDS	4232	4723	.	+	0	ID=cds-TMQ36679.1;Parent=gene-AO052_08985;Dbxref=NCBI_GP:TMQ36679.1;Name=TMQ36679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44157.1;locus_tag=AO052_08985;product=phosphatidylglycerophosphatase;protein_id=TMQ36679.1;transl_table=11
LNKO01000120.1	Genbank	gene	4723	5352	.	+	.	ID=gene-AO052_08990;Name=AO052_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08990
LNKO01000120.1	Protein Homology	CDS	4723	5352	.	+	0	ID=cds-TMQ36680.1;Parent=gene-AO052_08990;Dbxref=NCBI_GP:TMQ36680.1;Name=TMQ36680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57320.1;locus_tag=AO052_08990;product=hypothetical protein;protein_id=TMQ36680.1;transl_table=11
LNKO01000120.1	Genbank	gene	5369	6181	.	+	.	ID=gene-AO052_08995;Name=AO052_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_08995
LNKO01000120.1	Protein Homology	CDS	5369	6181	.	+	0	ID=cds-TMQ36681.1;Parent=gene-AO052_08995;Dbxref=NCBI_GP:TMQ36681.1;Name=TMQ36681.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696006.1;locus_tag=AO052_08995;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=TMQ36681.1;transl_table=11
LNKO01000120.1	Genbank	gene	6176	6424	.	-	.	ID=gene-AO052_09000;Name=AO052_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09000
LNKO01000120.1	Protein Homology	CDS	6176	6424	.	-	0	ID=cds-TMQ36682.1;Parent=gene-AO052_09000;Dbxref=NCBI_GP:TMQ36682.1;Name=TMQ36682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45154.1;locus_tag=AO052_09000;product=(2Fe-2S)-binding protein;protein_id=TMQ36682.1;transl_table=11
LNKO01000120.1	Genbank	gene	6470	7210	.	+	.	ID=gene-AO052_09005;Name=AO052_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09005
LNKO01000120.1	Protein Homology	CDS	6470	7210	.	+	0	ID=cds-TMQ36683.1;Parent=gene-AO052_09005;Dbxref=NCBI_GP:TMQ36683.1;Name=TMQ36683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702190.1;locus_tag=AO052_09005;product=hypothetical protein;protein_id=TMQ36683.1;transl_table=11
LNKO01000120.1	Genbank	gene	7359	8348	.	+	.	ID=gene-AO052_09010;Name=AO052_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09010
LNKO01000120.1	Protein Homology	CDS	7359	8348	.	+	0	ID=cds-TMQ36684.1;Parent=gene-AO052_09010;Dbxref=NCBI_GP:TMQ36684.1;Name=TMQ36684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650357.1;locus_tag=AO052_09010;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TMQ36684.1;transl_table=11
LNKO01000120.1	Genbank	gene	8382	8685	.	+	.	ID=gene-AO052_09015;Name=AO052_09015;end_range=8685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09015;partial=true
LNKO01000120.1	GeneMarkS+	CDS	8382	8685	.	+	0	ID=cds-TMQ36685.1;Parent=gene-AO052_09015;Dbxref=NCBI_GP:TMQ36685.1;Name=TMQ36685.1;end_range=8685,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_09015;partial=true;product=hypothetical protein;protein_id=TMQ36685.1;transl_table=11
##sequence-region LNKO01000121.1 1 8249
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000121.1	Genbank	region	1	8249	.	+	.	ID=LNKO01000121.1:1..8249;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000121.1	Genbank	gene	1	2057	.	+	.	ID=gene-AO052_09020;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AO052_09020;partial=true;start_range=.,1
LNKO01000121.1	Protein Homology	CDS	1	2057	.	+	2	ID=cds-TMQ36611.1;Parent=gene-AO052_09020;Dbxref=NCBI_GP:TMQ36611.1;Name=TMQ36611.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525857.1;locus_tag=AO052_09020;partial=true;product=phenylalanine--tRNA ligase subunit beta;protein_id=TMQ36611.1;start_range=.,1;transl_table=11
LNKO01000121.1	Genbank	gene	2059	2349	.	+	.	ID=gene-AO052_09025;Name=AO052_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09025
LNKO01000121.1	Protein Homology	CDS	2059	2349	.	+	0	ID=cds-TMQ36612.1;Parent=gene-AO052_09025;Dbxref=NCBI_GP:TMQ36612.1;Name=TMQ36612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43723.1;locus_tag=AO052_09025;product=integration host factor subunit alpha;protein_id=TMQ36612.1;transl_table=11
LNKO01000121.1	Genbank	gene	2402	2887	.	+	.	ID=gene-AO052_09030;Name=AO052_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09030
LNKO01000121.1	Protein Homology	CDS	2402	2887	.	+	0	ID=cds-TMQ36613.1;Parent=gene-AO052_09030;Dbxref=NCBI_GP:TMQ36613.1;Name=TMQ36613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637838.1;locus_tag=AO052_09030;product=endopeptidase;protein_id=TMQ36613.1;transl_table=11
LNKO01000121.1	Protein Homology	pseudogene	3052	3357	.	+	.	ID=gene-AO052_09035;Name=AO052_09035;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09035;pseudo=true
LNKO01000121.1	Genbank	pseudogene	3709	4299	.	+	.	ID=gene-AO052_09040;Name=AO052_09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09040;pseudo=true
LNKO01000121.1	Protein Homology	CDS	3709	4299	.	+	0	ID=cds-AO052_09040;Parent=gene-AO052_09040;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525856.1;locus_tag=AO052_09040;pseudo=true;transl_table=11
LNKO01000121.1	Genbank	gene	4453	4890	.	+	.	ID=gene-AO052_09045;Name=AO052_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09045
LNKO01000121.1	Protein Homology	CDS	4453	4890	.	+	0	ID=cds-TMQ36617.1;Parent=gene-AO052_09045;Dbxref=NCBI_GP:TMQ36617.1;Name=TMQ36617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702202.1;locus_tag=AO052_09045;product=arylsulfatase;protein_id=TMQ36617.1;transl_table=11
LNKO01000121.1	Genbank	gene	4975	5787	.	+	.	ID=gene-AO052_09050;Name=AO052_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09050
LNKO01000121.1	Protein Homology	CDS	4975	5787	.	+	0	ID=cds-TMQ36614.1;Parent=gene-AO052_09050;Dbxref=NCBI_GP:TMQ36614.1;Name=TMQ36614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657392.1;locus_tag=AO052_09050;product=D-hexose-6-phosphate mutarotase;protein_id=TMQ36614.1;transl_table=11
LNKO01000121.1	Genbank	gene	5977	6462	.	+	.	ID=gene-AO052_09055;Name=AO052_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09055
LNKO01000121.1	Protein Homology	CDS	5977	6462	.	+	0	ID=cds-TMQ36615.1;Parent=gene-AO052_09055;Dbxref=NCBI_GP:TMQ36615.1;Name=TMQ36615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005546414.1;locus_tag=AO052_09055;product=translation initiation factor IF-3;protein_id=TMQ36615.1;transl_table=11
LNKO01000121.1	Genbank	gene	6673	6870	.	+	.	ID=gene-AO052_09060;Name=AO052_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09060
LNKO01000121.1	Protein Homology	CDS	6673	6870	.	+	0	ID=cds-TMQ36618.1;Parent=gene-AO052_09060;Dbxref=NCBI_GP:TMQ36618.1;Name=TMQ36618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249241.1;locus_tag=AO052_09060;product=50S ribosomal protein L35;protein_id=TMQ36618.1;transl_table=11
LNKO01000121.1	Genbank	gene	6936	7289	.	+	.	ID=gene-AO052_09065;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AO052_09065
LNKO01000121.1	Protein Homology	CDS	6936	7289	.	+	0	ID=cds-TMQ36616.1;Parent=gene-AO052_09065;Dbxref=NCBI_GP:TMQ36616.1;Name=TMQ36616.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745267.1;locus_tag=AO052_09065;product=50S ribosomal protein L20;protein_id=TMQ36616.1;transl_table=11
LNKO01000121.1	Genbank	pseudogene	7402	8249	.	+	.	ID=gene-AO052_09070;Name=AO052_09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09070;pseudo=true
LNKO01000121.1	Protein Homology	CDS	7402	8249	.	+	0	ID=cds-AO052_09070;Parent=gene-AO052_09070;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525854.1;locus_tag=AO052_09070;pseudo=true;transl_table=11
##sequence-region LNKO01000122.1 1 19987
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000122.1	Genbank	region	1	19987	.	+	.	ID=LNKO01000122.1:1..19987;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000122.1	Genbank	gene	1	2757	.	+	.	ID=gene-AO052_09075;Name=AO052_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09075;partial=true;start_range=.,1
LNKO01000122.1	Protein Homology	CDS	1	2757	.	+	0	ID=cds-TMQ36574.1;Parent=gene-AO052_09075;Dbxref=NCBI_GP:TMQ36574.1;Name=TMQ36574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525854.1;locus_tag=AO052_09075;partial=true;product=exodeoxyribonuclease V subunit beta;protein_id=TMQ36574.1;start_range=.,1;transl_table=11
LNKO01000122.1	Genbank	gene	2757	4679	.	+	.	ID=gene-AO052_09080;Name=AO052_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09080
LNKO01000122.1	Protein Homology	CDS	2757	4679	.	+	0	ID=cds-TMQ36575.1;Parent=gene-AO052_09080;Dbxref=NCBI_GP:TMQ36575.1;Name=TMQ36575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525853.1;locus_tag=AO052_09080;product=exodeoxyribonuclease V subunit alpha;protein_id=TMQ36575.1;transl_table=11
LNKO01000122.1	Genbank	gene	4748	5194	.	-	.	ID=gene-AO052_09085;Name=AO052_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09085
LNKO01000122.1	Protein Homology	CDS	4748	5194	.	-	0	ID=cds-TMQ36576.1;Parent=gene-AO052_09085;Dbxref=NCBI_GP:TMQ36576.1;Name=TMQ36576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44161.1;locus_tag=AO052_09085;product=Ter macrodomain organizer matS-binding protein;protein_id=TMQ36576.1;transl_table=11
LNKO01000122.1	Genbank	gene	5321	7096	.	+	.	ID=gene-AO052_09090;Name=AO052_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09090
LNKO01000122.1	Protein Homology	CDS	5321	7096	.	+	0	ID=cds-TMQ36577.1;Parent=gene-AO052_09090;Dbxref=NCBI_GP:TMQ36577.1;Name=TMQ36577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43865.1;locus_tag=AO052_09090;product=peptidase;protein_id=TMQ36577.1;transl_table=11
LNKO01000122.1	Genbank	gene	7265	7798	.	+	.	ID=gene-AO052_09095;Name=AO052_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09095
LNKO01000122.1	Protein Homology	CDS	7265	7798	.	+	0	ID=cds-TMQ36578.1;Parent=gene-AO052_09095;Dbxref=NCBI_GP:TMQ36578.1;Name=TMQ36578.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702207.1;locus_tag=AO052_09095;product=beta-hydroxydecanoyl-ACP dehydratase;protein_id=TMQ36578.1;transl_table=11
LNKO01000122.1	Genbank	gene	8032	8760	.	+	.	ID=gene-AO052_09100;Name=AO052_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09100
LNKO01000122.1	Protein Homology	CDS	8032	8760	.	+	0	ID=cds-TMQ36579.1;Parent=gene-AO052_09100;Dbxref=NCBI_GP:TMQ36579.1;Name=TMQ36579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525851.1;locus_tag=AO052_09100;product=hypothetical protein;protein_id=TMQ36579.1;transl_table=11
LNKO01000122.1	Genbank	gene	8760	8894	.	+	.	ID=gene-AO052_09105;Name=AO052_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09105
LNKO01000122.1	Protein Homology	CDS	8760	8894	.	+	0	ID=cds-TMQ36580.1;Parent=gene-AO052_09105;Dbxref=NCBI_GP:TMQ36580.1;Name=TMQ36580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702209.1;locus_tag=AO052_09105;product=hypothetical protein;protein_id=TMQ36580.1;transl_table=11
LNKO01000122.1	cmsearch	sequence_feature	8966	9086	.	+	.	ID=id-LNKO01000122.1:8966..9086;Note=ribosomal protein S15 leader;gbkey=misc_feature
LNKO01000122.1	Genbank	gene	9030	9299	.	+	.	ID=gene-AO052_09110;Name=AO052_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09110
LNKO01000122.1	Protein Homology	CDS	9030	9299	.	+	0	ID=cds-TMQ36581.1;Parent=gene-AO052_09110;Dbxref=NCBI_GP:TMQ36581.1;Name=TMQ36581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702347.1;locus_tag=AO052_09110;product=30S ribosomal protein S15;protein_id=TMQ36581.1;transl_table=11
LNKO01000122.1	Genbank	gene	9615	11042	.	-	.	ID=gene-AO052_09115;Name=AO052_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09115
LNKO01000122.1	Protein Homology	CDS	9615	11042	.	-	0	ID=cds-TMQ36582.1;Parent=gene-AO052_09115;Dbxref=NCBI_GP:TMQ36582.1;Name=TMQ36582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525850.1;locus_tag=AO052_09115;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMQ36582.1;transl_table=11
LNKO01000122.1	Genbank	gene	11206	11682	.	+	.	ID=gene-AO052_09120;Name=AO052_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09120
LNKO01000122.1	Protein Homology	CDS	11206	11682	.	+	0	ID=cds-TMQ36583.1;Parent=gene-AO052_09120;Dbxref=NCBI_GP:TMQ36583.1;Name=TMQ36583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702211.1;locus_tag=AO052_09120;product=transcription elongation factor GreA;protein_id=TMQ36583.1;transl_table=11
LNKO01000122.1	Genbank	gene	11721	12020	.	-	.	ID=gene-AO052_09125;Name=AO052_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09125
LNKO01000122.1	Protein Homology	CDS	11721	12020	.	-	0	ID=cds-TMQ36584.1;Parent=gene-AO052_09125;Dbxref=NCBI_GP:TMQ36584.1;Name=TMQ36584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688408.1;locus_tag=AO052_09125;product=RNA-binding protein;protein_id=TMQ36584.1;transl_table=11
LNKO01000122.1	Genbank	gene	12149	12778	.	+	.	ID=gene-AO052_09130;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=AO052_09130
LNKO01000122.1	Protein Homology	CDS	12149	12778	.	+	0	ID=cds-TMQ36585.1;Parent=gene-AO052_09130;Dbxref=NCBI_GP:TMQ36585.1;Name=TMQ36585.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995972.1;locus_tag=AO052_09130;product=23S rRNA methyltransferase;protein_id=TMQ36585.1;transl_table=11
LNKO01000122.1	Genbank	gene	12869	14776	.	+	.	ID=gene-AO052_09135;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=AO052_09135
LNKO01000122.1	Protein Homology	CDS	12869	14776	.	+	0	ID=cds-TMQ36586.1;Parent=gene-AO052_09135;Dbxref=NCBI_GP:TMQ36586.1;Name=TMQ36586.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962130.1;locus_tag=AO052_09135;product=ATP-dependent metalloprotease;protein_id=TMQ36586.1;transl_table=11
LNKO01000122.1	Genbank	gene	14888	15715	.	+	.	ID=gene-AO052_09140;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AO052_09140
LNKO01000122.1	Protein Homology	CDS	14888	15715	.	+	0	ID=cds-TMQ36587.1;Parent=gene-AO052_09140;Dbxref=NCBI_GP:TMQ36587.1;Name=TMQ36587.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962129.1;locus_tag=AO052_09140;product=dihydropteroate synthase;protein_id=TMQ36587.1;transl_table=11
LNKO01000122.1	Genbank	gene	15753	17090	.	+	.	ID=gene-AO052_09145;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AO052_09145
LNKO01000122.1	Protein Homology	CDS	15753	17090	.	+	0	ID=cds-TMQ36588.1;Parent=gene-AO052_09145;Dbxref=NCBI_GP:TMQ36588.1;Name=TMQ36588.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550790.1;locus_tag=AO052_09145;product=phosphoglucosamine mutase;protein_id=TMQ36588.1;transl_table=11
LNKO01000122.1	Genbank	gene	17149	17643	.	+	.	ID=gene-AO052_09150;Name=AO052_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09150
LNKO01000122.1	Protein Homology	CDS	17149	17643	.	+	0	ID=cds-TMQ36589.1;Parent=gene-AO052_09150;Dbxref=NCBI_GP:TMQ36589.1;Name=TMQ36589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44164.1;locus_tag=AO052_09150;product=phosphohistidine phosphatase;protein_id=TMQ36589.1;transl_table=11
LNKO01000122.1	Genbank	gene	17858	18400	.	+	.	ID=gene-AO052_09155;Name=AO052_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09155
LNKO01000122.1	Protein Homology	CDS	17858	18400	.	+	0	ID=cds-TMQ36590.1;Parent=gene-AO052_09155;Dbxref=NCBI_GP:TMQ36590.1;Name=TMQ36590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525843.1;locus_tag=AO052_09155;product=histone;protein_id=TMQ36590.1;transl_table=11
LNKO01000122.1	Genbank	gene	18478	19842	.	-	.	ID=gene-AO052_09160;Name=AO052_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09160
LNKO01000122.1	Protein Homology	CDS	18478	19842	.	-	0	ID=cds-TMQ36591.1;Parent=gene-AO052_09160;Dbxref=NCBI_GP:TMQ36591.1;Name=TMQ36591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550788.1;locus_tag=AO052_09160;product=hypothetical protein;protein_id=TMQ36591.1;transl_table=11
##sequence-region LNKO01000123.1 1 11900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000123.1	Genbank	region	1	11900	.	+	.	ID=LNKO01000123.1:1..11900;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000123.1	Protein Homology	pseudogene	612	924	.	+	.	ID=gene-AO052_09165;Name=AO052_09165;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09165;pseudo=true
LNKO01000123.1	Genbank	gene	1070	1615	.	+	.	ID=gene-AO052_09170;Name=AO052_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09170
LNKO01000123.1	Protein Homology	CDS	1070	1615	.	+	0	ID=cds-TMQ36525.1;Parent=gene-AO052_09170;Dbxref=NCBI_GP:TMQ36525.1;Name=TMQ36525.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652768.1;locus_tag=AO052_09170;product=RNA polymerase subunit sigma;protein_id=TMQ36525.1;transl_table=11
LNKO01000123.1	Genbank	gene	1893	2276	.	-	.	ID=gene-AO052_09175;Name=AO052_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09175
LNKO01000123.1	Protein Homology	CDS	1893	2276	.	-	0	ID=cds-TMQ36526.1;Parent=gene-AO052_09175;Dbxref=NCBI_GP:TMQ36526.1;Name=TMQ36526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693911.1;locus_tag=AO052_09175;product=transcriptional regulator;protein_id=TMQ36526.1;transl_table=11
LNKO01000123.1	Genbank	gene	2432	2965	.	+	.	ID=gene-AO052_09180;Name=AO052_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09180
LNKO01000123.1	Protein Homology	CDS	2432	2965	.	+	0	ID=cds-TMQ36527.1;Parent=gene-AO052_09180;Dbxref=NCBI_GP:TMQ36527.1;Name=TMQ36527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995983.1;locus_tag=AO052_09180;product=hypothetical protein;protein_id=TMQ36527.1;transl_table=11
LNKO01000123.1	Genbank	gene	2919	3425	.	+	.	ID=gene-AO052_09185;Name=AO052_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09185
LNKO01000123.1	Protein Homology	CDS	2919	3425	.	+	0	ID=cds-TMQ36528.1;Parent=gene-AO052_09185;Dbxref=NCBI_GP:TMQ36528.1;Name=TMQ36528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707106.1;locus_tag=AO052_09185;product=hypothetical protein;protein_id=TMQ36528.1;transl_table=11
LNKO01000123.1	Genbank	gene	3620	4681	.	+	.	ID=gene-AO052_09190;Name=AO052_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09190
LNKO01000123.1	Protein Homology	CDS	3620	4681	.	+	0	ID=cds-TMQ36529.1;Parent=gene-AO052_09190;Dbxref=NCBI_GP:TMQ36529.1;Name=TMQ36529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628780.1;locus_tag=AO052_09190;product=peptide methionine sulfoxide reductase;protein_id=TMQ36529.1;transl_table=11
LNKO01000123.1	Genbank	gene	4693	5334	.	+	.	ID=gene-AO052_09195;Name=AO052_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09195
LNKO01000123.1	Protein Homology	CDS	4693	5334	.	+	0	ID=cds-TMQ36530.1;Parent=gene-AO052_09195;Dbxref=NCBI_GP:TMQ36530.1;Name=TMQ36530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44202.1;locus_tag=AO052_09195;product=cytochrome C biogenesis protein;protein_id=TMQ36530.1;transl_table=11
LNKO01000123.1	Genbank	gene	5377	5847	.	+	.	ID=gene-AO052_09200;Name=AO052_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09200
LNKO01000123.1	Protein Homology	CDS	5377	5847	.	+	0	ID=cds-TMQ36531.1;Parent=gene-AO052_09200;Dbxref=NCBI_GP:TMQ36531.1;Name=TMQ36531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995987.1;locus_tag=AO052_09200;product=hypothetical protein;protein_id=TMQ36531.1;transl_table=11
LNKO01000123.1	Genbank	gene	6230	6553	.	-	.	ID=gene-AO052_09205;Name=AO052_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09205
LNKO01000123.1	Protein Homology	CDS	6230	6553	.	-	0	ID=cds-TMQ36532.1;Parent=gene-AO052_09205;Dbxref=NCBI_GP:TMQ36532.1;Name=TMQ36532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995988.1;locus_tag=AO052_09205;product=hypothetical protein;protein_id=TMQ36532.1;transl_table=11
LNKO01000123.1	Genbank	gene	6620	7351	.	-	.	ID=gene-AO052_09210;Name=AO052_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09210
LNKO01000123.1	Protein Homology	CDS	6620	7351	.	-	0	ID=cds-TMQ36533.1;Parent=gene-AO052_09210;Dbxref=NCBI_GP:TMQ36533.1;Name=TMQ36533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525837.1;locus_tag=AO052_09210;product=molybdopterin-synthase adenylyltransferase;protein_id=TMQ36533.1;transl_table=11
LNKO01000123.1	Genbank	gene	7355	8569	.	-	.	ID=gene-AO052_09215;Name=AO052_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09215
LNKO01000123.1	Protein Homology	CDS	7355	8569	.	-	0	ID=cds-TMQ36534.1;Parent=gene-AO052_09215;Dbxref=NCBI_GP:TMQ36534.1;Name=TMQ36534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650441.1;locus_tag=AO052_09215;product=molybdopterin molybdenumtransferase;protein_id=TMQ36534.1;transl_table=11
LNKO01000123.1	Genbank	gene	8707	9363	.	+	.	ID=gene-AO052_09220;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AO052_09220
LNKO01000123.1	Protein Homology	CDS	8707	9363	.	+	0	ID=cds-TMQ36535.1;Parent=gene-AO052_09220;Dbxref=NCBI_GP:TMQ36535.1;Name=TMQ36535.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645472.1;locus_tag=AO052_09220;product=GTP cyclohydrolase I;protein_id=TMQ36535.1;transl_table=11
LNKO01000123.1	Genbank	gene	9424	9690	.	+	.	ID=gene-AO052_09225;Name=AO052_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09225
LNKO01000123.1	Protein Homology	CDS	9424	9690	.	+	0	ID=cds-TMQ36538.1;Parent=gene-AO052_09225;Dbxref=NCBI_GP:TMQ36538.1;Name=TMQ36538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688423.1;locus_tag=AO052_09225;product=hypothetical protein;protein_id=TMQ36538.1;transl_table=11
LNKO01000123.1	Genbank	gene	9793	10521	.	+	.	ID=gene-AO052_09230;Name=AO052_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09230
LNKO01000123.1	Protein Homology	CDS	9793	10521	.	+	0	ID=cds-TMQ36536.1;Parent=gene-AO052_09230;Dbxref=NCBI_GP:TMQ36536.1;Name=TMQ36536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45209.1;locus_tag=AO052_09230;product=dethiobiotin synthetase;protein_id=TMQ36536.1;transl_table=11
LNKO01000123.1	Genbank	gene	10610	11488	.	-	.	ID=gene-AO052_09235;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AO052_09235
LNKO01000123.1	Protein Homology	CDS	10610	11488	.	-	0	ID=cds-TMQ36537.1;Parent=gene-AO052_09235;Dbxref=NCBI_GP:TMQ36537.1;Name=TMQ36537.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=EXISTENCE: similar to AA sequence:SwissProt:P45208.1;locus_tag=AO052_09235;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=TMQ36537.1;transl_table=11
##sequence-region LNKO01000124.1 1 11762
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000124.1	Genbank	region	1	11762	.	+	.	ID=LNKO01000124.1:1..11762;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000124.1	Genbank	gene	52	480	.	+	.	ID=gene-AO052_09240;Name=AO052_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09240
LNKO01000124.1	Protein Homology	CDS	52	480	.	+	0	ID=cds-TMQ36412.1;Parent=gene-AO052_09240;Dbxref=NCBI_GP:TMQ36412.1;Name=TMQ36412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015432456.1;locus_tag=AO052_09240;product=50S ribosomal protein L13;protein_id=TMQ36412.1;transl_table=11
LNKO01000124.1	Genbank	gene	497	889	.	+	.	ID=gene-AO052_09245;Name=AO052_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09245
LNKO01000124.1	Protein Homology	CDS	497	889	.	+	0	ID=cds-TMQ36413.1;Parent=gene-AO052_09245;Dbxref=NCBI_GP:TMQ36413.1;Name=TMQ36413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG9.1;locus_tag=AO052_09245;product=30S ribosomal protein S9;protein_id=TMQ36413.1;transl_table=11
LNKO01000124.1	Genbank	gene	1069	1707	.	+	.	ID=gene-AO052_09250;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AO052_09250
LNKO01000124.1	Protein Homology	CDS	1069	1707	.	+	0	ID=cds-TMQ36414.1;Parent=gene-AO052_09250;Dbxref=NCBI_GP:TMQ36414.1;Name=TMQ36414.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=EXISTENCE: similar to AA sequence:SwissProt:P45207.1;locus_tag=AO052_09250;product=stringent starvation protein A;protein_id=TMQ36414.1;transl_table=11
LNKO01000124.1	Genbank	gene	1707	2159	.	+	.	ID=gene-AO052_09255;Name=AO052_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09255
LNKO01000124.1	Protein Homology	CDS	1707	2159	.	+	0	ID=cds-TMQ36415.1;Parent=gene-AO052_09255;Dbxref=NCBI_GP:TMQ36415.1;Name=TMQ36415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688427.1;locus_tag=AO052_09255;product=stringent starvation protein B;protein_id=TMQ36415.1;transl_table=11
LNKO01000124.1	Genbank	gene	2195	4072	.	-	.	ID=gene-AO052_09260;Name=AO052_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09260
LNKO01000124.1	Protein Homology	CDS	2195	4072	.	-	0	ID=cds-TMQ36416.1;Parent=gene-AO052_09260;Dbxref=NCBI_GP:TMQ36416.1;Name=TMQ36416.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666875.1;locus_tag=AO052_09260;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=TMQ36416.1;transl_table=11
LNKO01000124.1	Genbank	gene	4114	5004	.	-	.	ID=gene-AO052_09265;Name=AO052_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09265
LNKO01000124.1	Protein Homology	CDS	4114	5004	.	-	0	ID=cds-TMQ36417.1;Parent=gene-AO052_09265;Dbxref=NCBI_GP:TMQ36417.1;Name=TMQ36417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45204.1;locus_tag=AO052_09265;product=geranyl transferase;protein_id=TMQ36417.1;transl_table=11
LNKO01000124.1	Genbank	gene	5004	5258	.	-	.	ID=gene-AO052_09270;Name=AO052_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09270
LNKO01000124.1	Protein Homology	CDS	5004	5258	.	-	0	ID=cds-TMQ36418.1;Parent=gene-AO052_09270;Dbxref=NCBI_GP:TMQ36418.1;Name=TMQ36418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650457.1;locus_tag=AO052_09270;product=exodeoxyribonuclease VII small subunit;protein_id=TMQ36418.1;transl_table=11
LNKO01000124.1	Genbank	gene	5417	6874	.	+	.	ID=gene-AO052_09275;Name=AO052_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09275
LNKO01000124.1	Protein Homology	CDS	5417	6874	.	+	0	ID=cds-TMQ36419.1;Parent=gene-AO052_09275;Dbxref=NCBI_GP:TMQ36419.1;Name=TMQ36419.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UC48.1;locus_tag=AO052_09275;product=tRNA s(4)U8 sulfurtransferase;protein_id=TMQ36419.1;transl_table=11
LNKO01000124.1	Genbank	gene	6889	7209	.	+	.	ID=gene-AO052_09280;Name=AO052_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09280
LNKO01000124.1	Protein Homology	CDS	6889	7209	.	+	0	ID=cds-TMQ36420.1;Parent=gene-AO052_09280;Dbxref=NCBI_GP:TMQ36420.1;Name=TMQ36420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650459.1;locus_tag=AO052_09280;product=anhydro-N-acetylmuramic acid kinase;protein_id=TMQ36420.1;transl_table=11
LNKO01000124.1	Genbank	gene	7203	7922	.	+	.	ID=gene-AO052_09285;Name=AO052_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09285
LNKO01000124.1	Protein Homology	CDS	7203	7922	.	+	0	ID=cds-TMQ36421.1;Parent=gene-AO052_09285;Dbxref=NCBI_GP:TMQ36421.1;Name=TMQ36421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656617.1;locus_tag=AO052_09285;product=pseudouridine synthase;protein_id=TMQ36421.1;transl_table=11
LNKO01000124.1	Genbank	gene	7915	8073	.	+	.	ID=gene-AO052_09290;Name=AO052_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09290
LNKO01000124.1	Protein Homology	CDS	7915	8073	.	+	0	ID=cds-TMQ36422.1;Parent=gene-AO052_09290;Dbxref=NCBI_GP:TMQ36422.1;Name=TMQ36422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG0.1;locus_tag=AO052_09290;product=hypothetical protein;protein_id=TMQ36422.1;transl_table=11
LNKO01000124.1	Genbank	gene	8222	8440	.	+	.	ID=gene-AO052_09295;Name=AO052_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09295
LNKO01000124.1	Protein Homology	CDS	8222	8440	.	+	0	ID=cds-TMQ36423.1;Parent=gene-AO052_09295;Dbxref=NCBI_GP:TMQ36423.1;Name=TMQ36423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46449.1;locus_tag=AO052_09295;product=cold shock domain protein CspD;protein_id=TMQ36423.1;transl_table=11
LNKO01000124.1	Genbank	gene	8598	9074	.	-	.	ID=gene-AO052_09300;Name=AO052_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09300
LNKO01000124.1	Protein Homology	CDS	8598	9074	.	-	0	ID=cds-TMQ36424.1;Parent=gene-AO052_09300;Dbxref=NCBI_GP:TMQ36424.1;Name=TMQ36424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634649.1;locus_tag=AO052_09300;product=aminoacyl-tRNA deacylase;protein_id=TMQ36424.1;transl_table=11
LNKO01000124.1	Genbank	gene	9133	10086	.	+	.	ID=gene-AO052_09305;Name=AO052_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09305
LNKO01000124.1	Protein Homology	CDS	9133	10086	.	+	0	ID=cds-TMQ36425.1;Parent=gene-AO052_09305;Dbxref=NCBI_GP:TMQ36425.1;Name=TMQ36425.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660359.1;locus_tag=AO052_09305;product=aspartate-semialdehyde dehydrogenase;protein_id=TMQ36425.1;transl_table=11
LNKO01000124.1	Genbank	gene	10269	11390	.	-	.	ID=gene-AO052_09310;Name=AO052_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09310
LNKO01000124.1	Protein Homology	CDS	10269	11390	.	-	0	ID=cds-TMQ36426.1;Parent=gene-AO052_09310;Dbxref=NCBI_GP:TMQ36426.1;Name=TMQ36426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525823.1;locus_tag=AO052_09310;product=type IV pili;protein_id=TMQ36426.1;transl_table=11
LNKO01000124.1	Genbank	pseudogene	11402	11762	.	-	.	ID=gene-AO052_09315;Name=AO052_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09315;pseudo=true
LNKO01000124.1	Protein Homology	CDS	11402	11762	.	-	1	ID=cds-AO052_09315;Parent=gene-AO052_09315;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641858.1;locus_tag=AO052_09315;pseudo=true;transl_table=11
##sequence-region LNKO01000125.1 1 2562
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000125.1	Genbank	region	1	2562	.	+	.	ID=LNKO01000125.1:1..2562;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000125.1	Genbank	gene	1	1698	.	-	.	ID=gene-AO052_09320;Name=AO052_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09320;partial=true;start_range=.,1
LNKO01000125.1	Protein Homology	CDS	1	1698	.	-	0	ID=cds-TMQ36400.1;Parent=gene-AO052_09320;Dbxref=NCBI_GP:TMQ36400.1;Name=TMQ36400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996000.1;locus_tag=AO052_09320;partial=true;product=restriction endonuclease subunit M;protein_id=TMQ36400.1;start_range=.,1;transl_table=11
LNKO01000125.1	Genbank	gene	1920	2562	.	-	.	ID=gene-AO052_09325;Name=AO052_09325;end_range=2562,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09325;partial=true
LNKO01000125.1	Protein Homology	CDS	1920	2562	.	-	1	ID=cds-TMQ36401.1;Parent=gene-AO052_09325;Dbxref=NCBI_GP:TMQ36401.1;Name=TMQ36401.1;end_range=2562,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527682.1;locus_tag=AO052_09325;partial=true;product=tryptophan synthase subunit alpha;protein_id=TMQ36401.1;transl_table=11
##sequence-region LNKO01000126.1 1 13930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000126.1	Genbank	region	1	13930	.	+	.	ID=LNKO01000126.1:1..13930;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000126.1	Genbank	pseudogene	1	162	.	-	.	ID=gene-AO052_09330;Name=AO052_09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09330;pseudo=true
LNKO01000126.1	Protein Homology	CDS	1	162	.	-	0	ID=cds-AO052_09330;Parent=gene-AO052_09330;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671311.1;locus_tag=AO052_09330;pseudo=true;transl_table=11
LNKO01000126.1	Genbank	gene	162	1355	.	-	.	ID=gene-AO052_09335;Name=AO052_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09335
LNKO01000126.1	Protein Homology	CDS	162	1355	.	-	0	ID=cds-TMQ36350.1;Parent=gene-AO052_09335;Dbxref=NCBI_GP:TMQ36350.1;Name=TMQ36350.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527683.1;locus_tag=AO052_09335;product=tryptophan synthase subunit beta;protein_id=TMQ36350.1;transl_table=11
LNKO01000126.1	Genbank	gene	1372	2124	.	-	.	ID=gene-AO052_09340;Name=AO052_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09340
LNKO01000126.1	Protein Homology	CDS	1372	2124	.	-	0	ID=cds-TMQ36351.1;Parent=gene-AO052_09340;Dbxref=NCBI_GP:TMQ36351.1;Name=TMQ36351.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527684.1;locus_tag=AO052_09340;product=NAD(P)-dependent oxidoreductase;protein_id=TMQ36351.1;transl_table=11
LNKO01000126.1	Genbank	gene	2245	3045	.	-	.	ID=gene-AO052_09345;Name=AO052_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09345
LNKO01000126.1	Protein Homology	CDS	2245	3045	.	-	0	ID=cds-TMQ36352.1;Parent=gene-AO052_09345;Dbxref=NCBI_GP:TMQ36352.1;Name=TMQ36352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706721.1;locus_tag=AO052_09345;product=hypothetical protein;protein_id=TMQ36352.1;transl_table=11
LNKO01000126.1	Genbank	gene	3055	3765	.	-	.	ID=gene-AO052_09350;Name=AO052_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09350
LNKO01000126.1	Protein Homology	CDS	3055	3765	.	-	0	ID=cds-TMQ36353.1;Parent=gene-AO052_09350;Dbxref=NCBI_GP:TMQ36353.1;Name=TMQ36353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996005.1;locus_tag=AO052_09350;product=hypothetical protein;protein_id=TMQ36353.1;transl_table=11
LNKO01000126.1	Genbank	gene	3797	3970	.	-	.	ID=gene-AO052_09355;Name=AO052_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09355
LNKO01000126.1	Protein Homology	CDS	3797	3970	.	-	0	ID=cds-TMQ36354.1;Parent=gene-AO052_09355;Dbxref=NCBI_GP:TMQ36354.1;Name=TMQ36354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996006.1;locus_tag=AO052_09355;product=ABC transporter;protein_id=TMQ36354.1;transl_table=11
LNKO01000126.1	Genbank	gene	4182	5111	.	-	.	ID=gene-AO052_09360;Name=AO052_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09360
LNKO01000126.1	Protein Homology	CDS	4182	5111	.	-	0	ID=cds-TMQ36355.1;Parent=gene-AO052_09360;Dbxref=NCBI_GP:TMQ36355.1;Name=TMQ36355.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525816.1;locus_tag=AO052_09360;product=universal stress protein UspE;protein_id=TMQ36355.1;transl_table=11
LNKO01000126.1	Genbank	gene	5233	6006	.	-	.	ID=gene-AO052_09365;Name=AO052_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09365
LNKO01000126.1	Protein Homology	CDS	5233	6006	.	-	0	ID=cds-TMQ36356.1;Parent=gene-AO052_09365;Dbxref=NCBI_GP:TMQ36356.1;Name=TMQ36356.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525815.1;locus_tag=AO052_09365;product=transcriptional regulator;protein_id=TMQ36356.1;transl_table=11
LNKO01000126.1	Genbank	gene	6292	6377	.	+	.	ID=gene-AO052_09370;Name=AO052_09370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_09370
LNKO01000126.1	tRNAscan-SE	tRNA	6292	6377	.	+	.	ID=rna-AO052_09370;Parent=gene-AO052_09370;anticodon=(pos:6326..6328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_09370;product=tRNA-Leu
LNKO01000126.1	tRNAscan-SE	exon	6292	6377	.	+	.	ID=exon-AO052_09370-1;Parent=rna-AO052_09370;anticodon=(pos:6326..6328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_09370;product=tRNA-Leu
LNKO01000126.1	Genbank	gene	6587	7606	.	+	.	ID=gene-AO052_09375;Name=AO052_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09375
LNKO01000126.1	Protein Homology	CDS	6587	7606	.	+	0	ID=cds-TMQ36357.1;Parent=gene-AO052_09375;Dbxref=NCBI_GP:TMQ36357.1;Name=TMQ36357.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525814.1;locus_tag=AO052_09375;product=dihydroorotate dehydrogenase 2;protein_id=TMQ36357.1;transl_table=11
LNKO01000126.1	Genbank	gene	7606	8430	.	+	.	ID=gene-AO052_09380;Name=AO052_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09380
LNKO01000126.1	Protein Homology	CDS	7606	8430	.	+	0	ID=cds-TMQ36358.1;Parent=gene-AO052_09380;Dbxref=NCBI_GP:TMQ36358.1;Name=TMQ36358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525813.1;locus_tag=AO052_09380;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=TMQ36358.1;transl_table=11
LNKO01000126.1	Genbank	gene	8530	9138	.	-	.	ID=gene-AO052_09385;Name=AO052_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09385
LNKO01000126.1	Protein Homology	CDS	8530	9138	.	-	0	ID=cds-TMQ36359.1;Parent=gene-AO052_09385;Dbxref=NCBI_GP:TMQ36359.1;Name=TMQ36359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650560.1;locus_tag=AO052_09385;product=hypothetical protein;protein_id=TMQ36359.1;transl_table=11
LNKO01000126.1	Genbank	gene	9266	10660	.	-	.	ID=gene-AO052_09390;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AO052_09390
LNKO01000126.1	Protein Homology	CDS	9266	10660	.	-	0	ID=cds-TMQ36360.1;Parent=gene-AO052_09390;Dbxref=NCBI_GP:TMQ36360.1;Name=TMQ36360.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=AO052_09390;product=class II fumarate hydratase;protein_id=TMQ36360.1;transl_table=11
LNKO01000126.1	Genbank	gene	10895	11329	.	+	.	ID=gene-AO052_09395;Name=AO052_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09395
LNKO01000126.1	Protein Homology	CDS	10895	11329	.	+	0	ID=cds-TMQ36361.1;Parent=gene-AO052_09395;Dbxref=NCBI_GP:TMQ36361.1;Name=TMQ36361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996014.1;locus_tag=AO052_09395;product=DNA polymerase III subunit chi;protein_id=TMQ36361.1;transl_table=11
LNKO01000126.1	Genbank	gene	11345	11839	.	+	.	ID=gene-AO052_09400;Name=AO052_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09400
LNKO01000126.1	Protein Homology	CDS	11345	11839	.	+	0	ID=cds-TMQ36362.1;Parent=gene-AO052_09400;Dbxref=NCBI_GP:TMQ36362.1;Name=TMQ36362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996015.1;locus_tag=AO052_09400;product=hypothetical protein;protein_id=TMQ36362.1;transl_table=11
LNKO01000126.1	Genbank	gene	12081	12479	.	+	.	ID=gene-AO052_09405;Name=AO052_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09405
LNKO01000126.1	Protein Homology	CDS	12081	12479	.	+	0	ID=cds-TMQ36363.1;Parent=gene-AO052_09405;Dbxref=NCBI_GP:TMQ36363.1;Name=TMQ36363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525809.1;locus_tag=AO052_09405;product=hypothetical protein;protein_id=TMQ36363.1;transl_table=11
LNKO01000126.1	Genbank	gene	12701	13021	.	+	.	ID=gene-AO052_09410;Name=AO052_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09410
LNKO01000126.1	Protein Homology	CDS	12701	13021	.	+	0	ID=cds-TMQ36364.1;Parent=gene-AO052_09410;Dbxref=NCBI_GP:TMQ36364.1;Name=TMQ36364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525808.1;locus_tag=AO052_09410;product=hypothetical protein;protein_id=TMQ36364.1;transl_table=11
LNKO01000126.1	Genbank	gene	13035	13355	.	+	.	ID=gene-AO052_09415;Name=AO052_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09415
LNKO01000126.1	GeneMarkS+	CDS	13035	13355	.	+	0	ID=cds-TMQ36365.1;Parent=gene-AO052_09415;Dbxref=NCBI_GP:TMQ36365.1;Name=TMQ36365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_09415;product=hypothetical protein;protein_id=TMQ36365.1;transl_table=11
LNKO01000126.1	Genbank	pseudogene	13544	13930	.	+	.	ID=gene-AO052_09420;Name=AO052_09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09420;pseudo=true
LNKO01000126.1	GeneMarkS+	CDS	13544	13930	.	+	0	ID=cds-AO052_09420;Parent=gene-AO052_09420;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_09420;pseudo=true;transl_table=11
##sequence-region LNKO01000127.1 1 12082
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000127.1	Genbank	region	1	12082	.	+	.	ID=LNKO01000127.1:1..12082;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000127.1	Genbank	gene	1	2472	.	+	.	ID=gene-AO052_09425;Name=AO052_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09425;partial=true;start_range=.,1
LNKO01000127.1	Protein Homology	CDS	1	2472	.	+	0	ID=cds-TMQ36299.1;Parent=gene-AO052_09425;Dbxref=NCBI_GP:TMQ36299.1;Name=TMQ36299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626490.1;locus_tag=AO052_09425;partial=true;product=valine--tRNA ligase;protein_id=TMQ36299.1;start_range=.,1;transl_table=11
LNKO01000127.1	Genbank	gene	2512	2778	.	-	.	ID=gene-AO052_09430;Name=AO052_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09430
LNKO01000127.1	Protein Homology	CDS	2512	2778	.	-	0	ID=cds-TMQ36300.1;Parent=gene-AO052_09430;Dbxref=NCBI_GP:TMQ36300.1;Name=TMQ36300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525806.1;locus_tag=AO052_09430;product=hydrogenase;protein_id=TMQ36300.1;transl_table=11
LNKO01000127.1	Genbank	gene	2909	4339	.	-	.	ID=gene-AO052_09435;Name=AO052_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09435
LNKO01000127.1	Protein Homology	CDS	2909	4339	.	-	0	ID=cds-TMQ36308.1;Parent=gene-AO052_09435;Dbxref=NCBI_GP:TMQ36308.1;Name=TMQ36308.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671013.1;locus_tag=AO052_09435;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=TMQ36308.1;transl_table=11
LNKO01000127.1	Genbank	gene	4379	5380	.	-	.	ID=gene-AO052_09440;Name=AO052_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09440
LNKO01000127.1	Protein Homology	CDS	4379	5380	.	-	0	ID=cds-TMQ36301.1;Parent=gene-AO052_09440;Dbxref=NCBI_GP:TMQ36301.1;Name=TMQ36301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666931.1;locus_tag=AO052_09440;product=anthranilate phosphoribosyltransferase;protein_id=TMQ36301.1;transl_table=11
LNKO01000127.1	Genbank	gene	5433	5819	.	-	.	ID=gene-AO052_09445;Name=AO052_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09445
LNKO01000127.1	Protein Homology	CDS	5433	5819	.	-	0	ID=cds-TMQ36302.1;Parent=gene-AO052_09445;Dbxref=NCBI_GP:TMQ36302.1;Name=TMQ36302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631850.1;locus_tag=AO052_09445;product=hypothetical protein;protein_id=TMQ36302.1;transl_table=11
LNKO01000127.1	Genbank	gene	5868	6449	.	-	.	ID=gene-AO052_09450;Name=AO052_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09450
LNKO01000127.1	Protein Homology	CDS	5868	6449	.	-	0	ID=cds-TMQ36303.1;Parent=gene-AO052_09450;Dbxref=NCBI_GP:TMQ36303.1;Name=TMQ36303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641831.1;locus_tag=AO052_09450;product=anthranilate synthase subunit II;protein_id=TMQ36303.1;transl_table=11
LNKO01000127.1	Genbank	gene	6462	8018	.	-	.	ID=gene-AO052_09455;Name=AO052_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09455
LNKO01000127.1	Protein Homology	CDS	6462	8018	.	-	0	ID=cds-TMQ36304.1;Parent=gene-AO052_09455;Dbxref=NCBI_GP:TMQ36304.1;Name=TMQ36304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525802.1;locus_tag=AO052_09455;product=anthranilate synthase subunit I;protein_id=TMQ36304.1;transl_table=11
LNKO01000127.1	Genbank	gene	8124	8888	.	-	.	ID=gene-AO052_09460;Name=AO052_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09460
LNKO01000127.1	Protein Homology	CDS	8124	8888	.	-	0	ID=cds-TMQ36309.1;Parent=gene-AO052_09460;Dbxref=NCBI_GP:TMQ36309.1;Name=TMQ36309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656737.1;locus_tag=AO052_09460;product=glycosyltransferase;protein_id=TMQ36309.1;transl_table=11
LNKO01000127.1	Genbank	gene	9185	9682	.	-	.	ID=gene-AO052_09465;Name=AO052_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09465
LNKO01000127.1	Protein Homology	CDS	9185	9682	.	-	0	ID=cds-TMQ36305.1;Parent=gene-AO052_09465;Dbxref=NCBI_GP:TMQ36305.1;Name=TMQ36305.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671000.1;locus_tag=AO052_09465;product=ferritin;protein_id=TMQ36305.1;transl_table=11
LNKO01000127.1	Genbank	gene	9698	10186	.	-	.	ID=gene-AO052_09470;Name=AO052_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09470
LNKO01000127.1	Protein Homology	CDS	9698	10186	.	-	0	ID=cds-TMQ36306.1;Parent=gene-AO052_09470;Dbxref=NCBI_GP:TMQ36306.1;Name=TMQ36306.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43707.2;locus_tag=AO052_09470;product=ferritin;protein_id=TMQ36306.1;transl_table=11
LNKO01000127.1	Genbank	gene	10689	11708	.	+	.	ID=gene-AO052_09475;Name=AO052_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09475
LNKO01000127.1	Protein Homology	CDS	10689	11708	.	+	0	ID=cds-TMQ36307.1;Parent=gene-AO052_09475;Dbxref=NCBI_GP:TMQ36307.1;Name=TMQ36307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670994.1;locus_tag=AO052_09475;product=phosphate ABC transporter substrate-binding protein;protein_id=TMQ36307.1;transl_table=11
LNKO01000127.1	Genbank	pseudogene	11799	12082	.	+	.	ID=gene-AO052_09480;Name=AO052_09480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09480;pseudo=true
LNKO01000127.1	Protein Homology	CDS	11799	12082	.	+	0	ID=cds-AO052_09480;Parent=gene-AO052_09480;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650599.1;locus_tag=AO052_09480;pseudo=true;transl_table=11
##sequence-region LNKO01000128.1 1 26536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000128.1	Genbank	region	1	26536	.	+	.	ID=LNKO01000128.1:1..26536;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000128.1	Genbank	gene	1	662	.	+	.	ID=gene-AO052_09485;Name=AO052_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09485;partial=true;start_range=.,1
LNKO01000128.1	Protein Homology	CDS	1	662	.	+	2	ID=cds-TMQ36272.1;Parent=gene-AO052_09485;Dbxref=NCBI_GP:TMQ36272.1;Name=TMQ36272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662263.1;locus_tag=AO052_09485;partial=true;product=phosphate ABC transporter permease;protein_id=TMQ36272.1;start_range=.,1;transl_table=11
LNKO01000128.1	Genbank	gene	664	1512	.	+	.	ID=gene-AO052_09490;Name=AO052_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09490
LNKO01000128.1	Protein Homology	CDS	664	1512	.	+	0	ID=cds-TMQ36273.1;Parent=gene-AO052_09490;Dbxref=NCBI_GP:TMQ36273.1;Name=TMQ36273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45190.1;locus_tag=AO052_09490;product=phosphate ABC transporter permease;protein_id=TMQ36273.1;transl_table=11
LNKO01000128.1	Genbank	gene	1522	2289	.	+	.	ID=gene-AO052_09495;Name=AO052_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09495
LNKO01000128.1	Protein Homology	CDS	1522	2289	.	+	0	ID=cds-TMQ36274.1;Parent=gene-AO052_09495;Dbxref=NCBI_GP:TMQ36274.1;Name=TMQ36274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662257.1;locus_tag=AO052_09495;product=phosphate ABC transporter ATP-binding protein;protein_id=TMQ36274.1;transl_table=11
LNKO01000128.1	Genbank	gene	2366	3061	.	+	.	ID=gene-AO052_09500;Name=AO052_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09500
LNKO01000128.1	Protein Homology	CDS	2366	3061	.	+	0	ID=cds-TMQ36275.1;Parent=gene-AO052_09500;Dbxref=NCBI_GP:TMQ36275.1;Name=TMQ36275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996031.1;locus_tag=AO052_09500;product=two-component system response regulator;protein_id=TMQ36275.1;transl_table=11
LNKO01000128.1	Genbank	gene	3058	4335	.	+	.	ID=gene-AO052_09505;Name=AO052_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09505
LNKO01000128.1	Protein Homology	CDS	3058	4335	.	+	0	ID=cds-TMQ36276.1;Parent=gene-AO052_09505;Dbxref=NCBI_GP:TMQ36276.1;Name=TMQ36276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962061.1;locus_tag=AO052_09505;product=PAS domain-containing sensor histidine kinase;protein_id=TMQ36276.1;transl_table=11
LNKO01000128.1	Genbank	gene	5026	6447	.	-	.	ID=gene-AO052_09510;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AO052_09510
LNKO01000128.1	Protein Homology	CDS	5026	6447	.	-	0	ID=cds-TMQ36277.1;Parent=gene-AO052_09510;Dbxref=NCBI_GP:TMQ36277.1;Name=TMQ36277.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525797.1;locus_tag=AO052_09510;product=exodeoxyribonuclease I;protein_id=TMQ36277.1;transl_table=11
LNKO01000128.1	Genbank	gene	6460	7335	.	-	.	ID=gene-AO052_09515;Name=AO052_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09515
LNKO01000128.1	Protein Homology	CDS	6460	7335	.	-	0	ID=cds-TMQ36278.1;Parent=gene-AO052_09515;Dbxref=NCBI_GP:TMQ36278.1;Name=TMQ36278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525796.1;locus_tag=AO052_09515;product=hypothetical protein;protein_id=TMQ36278.1;transl_table=11
LNKO01000128.1	Genbank	gene	7544	8500	.	-	.	ID=gene-AO052_09520;Name=AO052_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09520
LNKO01000128.1	Protein Homology	CDS	7544	8500	.	-	0	ID=cds-TMQ36279.1;Parent=gene-AO052_09520;Dbxref=NCBI_GP:TMQ36279.1;Name=TMQ36279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O68584.1;locus_tag=AO052_09520;product=restriction endonuclease;protein_id=TMQ36279.1;transl_table=11
LNKO01000128.1	Genbank	gene	8503	9495	.	-	.	ID=gene-AO052_09525;Name=AO052_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09525
LNKO01000128.1	Protein Homology	CDS	8503	9495	.	-	0	ID=cds-TMQ36289.1;Parent=gene-AO052_09525;Dbxref=NCBI_GP:TMQ36289.1;Name=TMQ36289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525795.1;locus_tag=AO052_09525;product=modification methylase;protein_id=TMQ36289.1;transl_table=11
LNKO01000128.1	Genbank	gene	9576	14108	.	-	.	ID=gene-AO052_09530;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AO052_09530
LNKO01000128.1	Protein Homology	CDS	9576	14108	.	-	0	ID=cds-TMQ36280.1;Parent=gene-AO052_09530;Dbxref=NCBI_GP:TMQ36280.1;Name=TMQ36280.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687203.1;locus_tag=AO052_09530;product=cell division protein MukB;protein_id=TMQ36280.1;transl_table=11
LNKO01000128.1	Genbank	gene	14108	14839	.	-	.	ID=gene-AO052_09535;Name=AO052_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09535
LNKO01000128.1	Protein Homology	CDS	14108	14839	.	-	0	ID=cds-TMQ36281.1;Parent=gene-AO052_09535;Dbxref=NCBI_GP:TMQ36281.1;Name=TMQ36281.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653967.1;locus_tag=AO052_09535;product=condensin subunit E;protein_id=TMQ36281.1;transl_table=11
LNKO01000128.1	Genbank	gene	14886	16220	.	-	.	ID=gene-AO052_09540;Name=AO052_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09540
LNKO01000128.1	Protein Homology	CDS	14886	16220	.	-	0	ID=cds-TMQ36282.1;Parent=gene-AO052_09540;Dbxref=NCBI_GP:TMQ36282.1;Name=TMQ36282.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O30867.1;locus_tag=AO052_09540;product=condensin subunit F;protein_id=TMQ36282.1;transl_table=11
LNKO01000128.1	Genbank	gene	16378	17301	.	+	.	ID=gene-AO052_09545;Name=AO052_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09545
LNKO01000128.1	Protein Homology	CDS	16378	17301	.	+	0	ID=cds-TMQ36283.1;Parent=gene-AO052_09545;Dbxref=NCBI_GP:TMQ36283.1;Name=TMQ36283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634611.1;locus_tag=AO052_09545;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=TMQ36283.1;transl_table=11
LNKO01000128.1	Genbank	gene	17303	17632	.	+	.	ID=gene-AO052_09550;Name=AO052_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09550
LNKO01000128.1	Protein Homology	CDS	17303	17632	.	+	0	ID=cds-TMQ36284.1;Parent=gene-AO052_09550;Dbxref=NCBI_GP:TMQ36284.1;Name=TMQ36284.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996041.1;locus_tag=AO052_09550;product=sulfur relay protein TusE;protein_id=TMQ36284.1;transl_table=11
LNKO01000128.1	Genbank	gene	17882	19243	.	-	.	ID=gene-AO052_09555;Name=AO052_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09555
LNKO01000128.1	Protein Homology	CDS	17882	19243	.	-	0	ID=cds-TMQ36285.1;Parent=gene-AO052_09555;Dbxref=NCBI_GP:TMQ36285.1;Name=TMQ36285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996042.1;locus_tag=AO052_09555;product=hypothetical protein;protein_id=TMQ36285.1;transl_table=11
LNKO01000128.1	Genbank	gene	19518	20324	.	-	.	ID=gene-AO052_09560;Name=AO052_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09560
LNKO01000128.1	Protein Homology	CDS	19518	20324	.	-	0	ID=cds-TMQ36286.1;Parent=gene-AO052_09560;Dbxref=NCBI_GP:TMQ36286.1;Name=TMQ36286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996042.1;locus_tag=AO052_09560;product=hypothetical protein;protein_id=TMQ36286.1;transl_table=11
LNKO01000128.1	Genbank	gene	20737	22668	.	-	.	ID=gene-AO052_09565;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AO052_09565
LNKO01000128.1	Protein Homology	CDS	20737	22668	.	-	0	ID=cds-TMQ36287.1;Parent=gene-AO052_09565;Dbxref=NCBI_GP:TMQ36287.1;Name=TMQ36287.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK77.1;locus_tag=AO052_09565;product=threonine--tRNA ligase;protein_id=TMQ36287.1;transl_table=11
LNKO01000128.1	Protein Homology	pseudogene	22953	23527	.	+	.	ID=gene-AO052_09570;Name=AO052_09570;Note=disrupted;description=FMN-dependent NADH-azoreductase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09570;pseudo=true
LNKO01000128.1	Genbank	gene	23602	26208	.	-	.	ID=gene-AO052_09575;Name=AO052_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09575
LNKO01000128.1	Protein Homology	CDS	23602	26208	.	-	0	ID=cds-TMQ36288.1;Parent=gene-AO052_09575;Dbxref=NCBI_GP:TMQ36288.1;Name=TMQ36288.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525788.1;locus_tag=AO052_09575;product=DNA topoisomerase I subunit omega;protein_id=TMQ36288.1;transl_table=11
LNKO01000128.1	Genbank	pseudogene	26304	26536	.	+	.	ID=gene-AO052_09580;Name=AO052_09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09580;pseudo=true
LNKO01000128.1	Protein Homology	CDS	26304	26536	.	+	0	ID=cds-AO052_09580;Parent=gene-AO052_09580;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43011.1;locus_tag=AO052_09580;pseudo=true;transl_table=11
##sequence-region LNKO01000129.1 1 235
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000129.1	Genbank	region	1	235	.	+	.	ID=LNKO01000129.1:1..235;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000129.1	Genbank	pseudogene	1	235	.	+	.	ID=gene-AO052_09585;Name=AO052_09585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09585;pseudo=true
LNKO01000129.1	Protein Homology	CDS	1	235	.	+	2	ID=cds-AO052_09585;Parent=gene-AO052_09585;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670949.1;locus_tag=AO052_09585;pseudo=true;transl_table=11
##sequence-region LNKO01000130.1 1 1543
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000130.1	Genbank	region	1	1543	.	+	.	ID=LNKO01000130.1:1..1543;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000130.1	Genbank	pseudogene	1	448	.	+	.	ID=gene-AO052_09590;Name=AO052_09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09590;pseudo=true
LNKO01000130.1	Protein Homology	CDS	1	448	.	+	1	ID=cds-AO052_09590;Parent=gene-AO052_09590;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656773.1;locus_tag=AO052_09590;pseudo=true;transl_table=11
LNKO01000130.1	Genbank	gene	512	1543	.	-	.	ID=gene-AO052_09595;Name=pntB;end_range=1543,.;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AO052_09595;partial=true
LNKO01000130.1	Protein Homology	CDS	512	1543	.	-	0	ID=cds-TMQ36214.1;Parent=gene-AO052_09595;Dbxref=NCBI_GP:TMQ36214.1;Name=TMQ36214.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;end_range=1543,.;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43010.1;locus_tag=AO052_09595;partial=true;product=pyridine nucleotide transhydrogenase;protein_id=TMQ36214.1;transl_table=11
##sequence-region LNKO01000131.1 1 3451
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000131.1	Genbank	region	1	3451	.	+	.	ID=LNKO01000131.1:1..3451;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000131.1	Genbank	pseudogene	1	393	.	-	.	ID=gene-AO052_09600;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=pseudogene;locus_tag=AO052_09600;pseudo=true
LNKO01000131.1	Protein Homology	CDS	1	393	.	-	0	ID=cds-AO052_09600;Parent=gene-AO052_09600;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43010.1;locus_tag=AO052_09600;pseudo=true;transl_table=11
LNKO01000131.1	Genbank	gene	404	1942	.	-	.	ID=gene-AO052_09605;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AO052_09605
LNKO01000131.1	Protein Homology	CDS	404	1942	.	-	0	ID=cds-TMQ36207.1;Parent=gene-AO052_09605;Dbxref=NCBI_GP:TMQ36207.1;Name=TMQ36207.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996049.1;locus_tag=AO052_09605;product=NAD(P) transhydrogenase subunit alpha;protein_id=TMQ36207.1;transl_table=11
LNKO01000131.1	Protein Homology	pseudogene	2203	2693	.	-	.	ID=gene-AO052_09610;Name=AO052_09610;Note=disrupted;description=glycogen phosphorylase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09610;pseudo=true
LNKO01000131.1	Genbank	gene	2866	3099	.	-	.	ID=gene-AO052_09615;Name=AO052_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09615
LNKO01000131.1	GeneMarkS+	CDS	2866	3099	.	-	0	ID=cds-TMQ36208.1;Parent=gene-AO052_09615;Dbxref=NCBI_GP:TMQ36208.1;Name=TMQ36208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_09615;product=hypothetical protein;protein_id=TMQ36208.1;transl_table=11
##sequence-region LNKO01000132.1 1 2318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000132.1	Genbank	region	1	2318	.	+	.	ID=LNKO01000132.1:1..2318;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000132.1	Genbank	gene	202	1131	.	+	.	ID=gene-AO052_09620;Name=AO052_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09620
LNKO01000132.1	Protein Homology	CDS	202	1131	.	+	0	ID=cds-TMQ36189.1;Parent=gene-AO052_09620;Dbxref=NCBI_GP:TMQ36189.1;Name=TMQ36189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688068.1;locus_tag=AO052_09620;product=LysR family transcriptional regulator;protein_id=TMQ36189.1;transl_table=11
LNKO01000132.1	Genbank	gene	1141	1875	.	+	.	ID=gene-AO052_09625;Name=AO052_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09625
LNKO01000132.1	Protein Homology	CDS	1141	1875	.	+	0	ID=cds-TMQ36190.1;Parent=gene-AO052_09625;Dbxref=NCBI_GP:TMQ36190.1;Name=TMQ36190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665596.1;locus_tag=AO052_09625;product=branched-chain amino acid transporter AzlC;protein_id=TMQ36190.1;transl_table=11
LNKO01000132.1	Genbank	gene	1872	2201	.	+	.	ID=gene-AO052_09630;Name=AO052_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09630
LNKO01000132.1	Protein Homology	CDS	1872	2201	.	+	0	ID=cds-TMQ36191.1;Parent=gene-AO052_09630;Dbxref=NCBI_GP:TMQ36191.1;Name=TMQ36191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525629.1;locus_tag=AO052_09630;product=branched-chain amino acid ABC transporter;protein_id=TMQ36191.1;transl_table=11
##sequence-region LNKO01000133.1 1 26410
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000133.1	Genbank	region	1	26410	.	+	.	ID=LNKO01000133.1:1..26410;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000133.1	Genbank	gene	1	217	.	+	.	ID=gene-AO052_09635;Name=AO052_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09635;partial=true;start_range=.,1
LNKO01000133.1	Protein Homology	CDS	1	217	.	+	1	ID=cds-TMQ36154.1;Parent=gene-AO052_09635;Dbxref=NCBI_GP:TMQ36154.1;Name=TMQ36154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688063.1;locus_tag=AO052_09635;partial=true;product=hypothetical protein;protein_id=TMQ36154.1;start_range=.,1;transl_table=11
LNKO01000133.1	Genbank	gene	293	1876	.	-	.	ID=gene-AO052_09640;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AO052_09640
LNKO01000133.1	Protein Homology	CDS	293	1876	.	-	0	ID=cds-TMQ36155.1;Parent=gene-AO052_09640;Dbxref=NCBI_GP:TMQ36155.1;Name=TMQ36155.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJL3.1;locus_tag=AO052_09640;product=peptide chain release factor 3;protein_id=TMQ36155.1;transl_table=11
LNKO01000133.1	Genbank	gene	2055	2843	.	+	.	ID=gene-AO052_09645;Name=AO052_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09645
LNKO01000133.1	Protein Homology	CDS	2055	2843	.	+	0	ID=cds-TMQ36156.1;Parent=gene-AO052_09645;Dbxref=NCBI_GP:TMQ36156.1;Name=TMQ36156.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356566.1;locus_tag=AO052_09645;product=enoyl-ACP reductase;protein_id=TMQ36156.1;transl_table=11
LNKO01000133.1	Genbank	gene	2925	4904	.	+	.	ID=gene-AO052_09650;Name=AO052_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09650
LNKO01000133.1	Protein Homology	CDS	2925	4904	.	+	0	ID=cds-TMQ36157.1;Parent=gene-AO052_09650;Dbxref=NCBI_GP:TMQ36157.1;Name=TMQ36157.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702510.1;locus_tag=AO052_09650;product=exoribonuclease II;protein_id=TMQ36157.1;transl_table=11
LNKO01000133.1	Genbank	gene	4882	5754	.	+	.	ID=gene-AO052_09655;Name=AO052_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09655
LNKO01000133.1	Protein Homology	CDS	4882	5754	.	+	0	ID=cds-TMQ36158.1;Parent=gene-AO052_09655;Dbxref=NCBI_GP:TMQ36158.1;Name=TMQ36158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550645.1;locus_tag=AO052_09655;product=DNA-binding protein;protein_id=TMQ36158.1;transl_table=11
LNKO01000133.1	Genbank	gene	5987	6628	.	+	.	ID=gene-AO052_09660;Name=AO052_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09660
LNKO01000133.1	Protein Homology	CDS	5987	6628	.	+	0	ID=cds-TMQ36159.1;Parent=gene-AO052_09660;Dbxref=NCBI_GP:TMQ36159.1;Name=TMQ36159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702508.1;locus_tag=AO052_09660;product=hypothetical protein;protein_id=TMQ36159.1;transl_table=11
LNKO01000133.1	Genbank	gene	6625	7554	.	+	.	ID=gene-AO052_09665;Name=AO052_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09665
LNKO01000133.1	Protein Homology	CDS	6625	7554	.	+	0	ID=cds-TMQ36160.1;Parent=gene-AO052_09665;Dbxref=NCBI_GP:TMQ36160.1;Name=TMQ36160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995766.1;locus_tag=AO052_09665;product=hypothetical protein;protein_id=TMQ36160.1;transl_table=11
LNKO01000133.1	Genbank	gene	7541	8278	.	+	.	ID=gene-AO052_09670;Name=AO052_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09670
LNKO01000133.1	Protein Homology	CDS	7541	8278	.	+	0	ID=cds-TMQ36161.1;Parent=gene-AO052_09670;Dbxref=NCBI_GP:TMQ36161.1;Name=TMQ36161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702506.1;locus_tag=AO052_09670;product=lactam utilization protein LamB;protein_id=TMQ36161.1;transl_table=11
LNKO01000133.1	Genbank	gene	8322	9515	.	+	.	ID=gene-AO052_09675;Name=AO052_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09675
LNKO01000133.1	Protein Homology	CDS	8322	9515	.	+	0	ID=cds-TMQ36162.1;Parent=gene-AO052_09675;Dbxref=NCBI_GP:TMQ36162.1;Name=TMQ36162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05087.1;locus_tag=AO052_09675;product=hypothetical protein;protein_id=TMQ36162.1;transl_table=11
LNKO01000133.1	Genbank	gene	9586	10920	.	-	.	ID=gene-AO052_09680;Name=AO052_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09680
LNKO01000133.1	Protein Homology	CDS	9586	10920	.	-	0	ID=cds-TMQ36163.1;Parent=gene-AO052_09680;Dbxref=NCBI_GP:TMQ36163.1;Name=TMQ36163.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654923.1;locus_tag=AO052_09680;product=argininosuccinate synthase;protein_id=TMQ36163.1;transl_table=11
LNKO01000133.1	Genbank	gene	11076	11948	.	-	.	ID=gene-AO052_09685;Name=AO052_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09685
LNKO01000133.1	Protein Homology	CDS	11076	11948	.	-	0	ID=cds-TMQ36164.1;Parent=gene-AO052_09685;Dbxref=NCBI_GP:TMQ36164.1;Name=TMQ36164.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFF7.1;locus_tag=AO052_09685;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TMQ36164.1;transl_table=11
LNKO01000133.1	Genbank	gene	12114	14462	.	-	.	ID=gene-AO052_09690;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=AO052_09690
LNKO01000133.1	Protein Homology	CDS	12114	14462	.	-	0	ID=cds-TMQ36165.1;Parent=gene-AO052_09690;Dbxref=NCBI_GP:TMQ36165.1;Name=TMQ36165.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525634.1;locus_tag=AO052_09690;product=penicillin-binding protein 1B;protein_id=TMQ36165.1;transl_table=11
LNKO01000133.1	Genbank	gene	14469	14822	.	-	.	ID=gene-AO052_09695;Name=AO052_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09695
LNKO01000133.1	Protein Homology	CDS	14469	14822	.	-	0	ID=cds-TMQ36166.1;Parent=gene-AO052_09695;Dbxref=NCBI_GP:TMQ36166.1;Name=TMQ36166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44297.2;locus_tag=AO052_09695;product=hypothetical protein;protein_id=TMQ36166.1;transl_table=11
LNKO01000133.1	Genbank	gene	14824	15168	.	-	.	ID=gene-AO052_09700;Name=AO052_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09700
LNKO01000133.1	Protein Homology	CDS	14824	15168	.	-	0	ID=cds-TMQ36167.1;Parent=gene-AO052_09700;Dbxref=NCBI_GP:TMQ36167.1;Name=TMQ36167.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45344.1;locus_tag=AO052_09700;product=iron-sulfur cluster insertion protein ErpA;protein_id=TMQ36167.1;transl_table=11
LNKO01000133.1	Genbank	gene	15304	16110	.	+	.	ID=gene-AO052_09705;Name=AO052_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09705
LNKO01000133.1	Protein Homology	CDS	15304	16110	.	+	0	ID=cds-TMQ36168.1;Parent=gene-AO052_09705;Dbxref=NCBI_GP:TMQ36168.1;Name=TMQ36168.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688048.1;locus_tag=AO052_09705;product=methionine aminopeptidase;protein_id=TMQ36168.1;transl_table=11
LNKO01000133.1	Genbank	gene	16204	18795	.	+	.	ID=gene-AO052_09710;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AO052_09710
LNKO01000133.1	Protein Homology	CDS	16204	18795	.	+	0	ID=cds-TMQ36169.1;Parent=gene-AO052_09710;Dbxref=NCBI_GP:TMQ36169.1;Name=TMQ36169.1;gbkey=CDS;gene=glnD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500974.1;locus_tag=AO052_09710;product=bifunctional uridylyltransferase/uridylyl-removing protein;protein_id=TMQ36169.1;transl_table=11
LNKO01000133.1	Genbank	gene	18870	19937	.	+	.	ID=gene-AO052_09715;Name=AO052_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09715
LNKO01000133.1	Protein Homology	CDS	18870	19937	.	+	0	ID=cds-TMQ36170.1;Parent=gene-AO052_09715;Dbxref=NCBI_GP:TMQ36170.1;Name=TMQ36170.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688044.1;locus_tag=AO052_09715;product=UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase;protein_id=TMQ36170.1;transl_table=11
LNKO01000133.1	Genbank	gene	20074	20149	.	-	.	ID=gene-AO052_09720;Name=AO052_09720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_09720
LNKO01000133.1	tRNAscan-SE	tRNA	20074	20149	.	-	.	ID=rna-AO052_09720;Parent=gene-AO052_09720;anticodon=(pos:complement(20114..20116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_09720;product=tRNA-Gly
LNKO01000133.1	tRNAscan-SE	exon	20074	20149	.	-	.	ID=exon-AO052_09720-1;Parent=rna-AO052_09720;anticodon=(pos:complement(20114..20116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_09720;product=tRNA-Gly
LNKO01000133.1	Genbank	gene	20243	20791	.	-	.	ID=gene-AO052_09725;Name=AO052_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09725
LNKO01000133.1	Protein Homology	CDS	20243	20791	.	-	0	ID=cds-TMQ36171.1;Parent=gene-AO052_09725;Dbxref=NCBI_GP:TMQ36171.1;Name=TMQ36171.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664903.1;locus_tag=AO052_09725;product=oligoribonuclease;protein_id=TMQ36171.1;transl_table=11
LNKO01000133.1	Genbank	gene	20862	21902	.	+	.	ID=gene-AO052_09730;Name=AO052_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09730
LNKO01000133.1	Protein Homology	CDS	20862	21902	.	+	0	ID=cds-TMQ36172.1;Parent=gene-AO052_09730;Dbxref=NCBI_GP:TMQ36172.1;Name=TMQ36172.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649964.1;locus_tag=AO052_09730;product=GTPase RsgA;protein_id=TMQ36172.1;transl_table=11
LNKO01000133.1	Genbank	gene	22061	22318	.	+	.	ID=gene-AO052_09735;Name=AO052_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09735
LNKO01000133.1	Protein Homology	CDS	22061	22318	.	+	0	ID=cds-TMQ36173.1;Parent=gene-AO052_09735;Dbxref=NCBI_GP:TMQ36173.1;Name=TMQ36173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43921.1;locus_tag=AO052_09735;product=PTS sugar transporter;protein_id=TMQ36173.1;transl_table=11
LNKO01000133.1	Genbank	gene	22398	24125	.	+	.	ID=gene-AO052_09740;Name=AO052_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09740
LNKO01000133.1	Protein Homology	CDS	22398	24125	.	+	0	ID=cds-TMQ36174.1;Parent=gene-AO052_09740;Dbxref=NCBI_GP:TMQ36174.1;Name=TMQ36174.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654342.1;locus_tag=AO052_09740;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=TMQ36174.1;transl_table=11
LNKO01000133.1	Genbank	gene	24185	24685	.	+	.	ID=gene-AO052_09745;Name=AO052_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09745
LNKO01000133.1	Protein Homology	CDS	24185	24685	.	+	0	ID=cds-TMQ36175.1;Parent=gene-AO052_09745;Dbxref=NCBI_GP:TMQ36175.1;Name=TMQ36175.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688036.1;locus_tag=AO052_09745;product=PTS glucose transporter subunit IIA;protein_id=TMQ36175.1;transl_table=11
LNKO01000133.1	Genbank	gene	24869	25036	.	+	.	ID=gene-AO052_09750;Name=AO052_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09750
LNKO01000133.1	Protein Homology	CDS	24869	25036	.	+	0	ID=cds-TMQ36176.1;Parent=gene-AO052_09750;Dbxref=NCBI_GP:TMQ36176.1;Name=TMQ36176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995782.1;locus_tag=AO052_09750;product=leucyl aminopeptidase;protein_id=TMQ36176.1;transl_table=11
LNKO01000133.1	Genbank	gene	25186	25551	.	+	.	ID=gene-AO052_09755;Name=AO052_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09755
LNKO01000133.1	Protein Homology	CDS	25186	25551	.	+	0	ID=cds-TMQ36177.1;Parent=gene-AO052_09755;Dbxref=NCBI_GP:TMQ36177.1;Name=TMQ36177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995783.1;locus_tag=AO052_09755;product=hypothetical protein;protein_id=TMQ36177.1;transl_table=11
LNKO01000133.1	Genbank	gene	25615	26277	.	+	.	ID=gene-AO052_09760;Name=AO052_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09760
LNKO01000133.1	Protein Homology	CDS	25615	26277	.	+	0	ID=cds-TMQ36178.1;Parent=gene-AO052_09760;Dbxref=NCBI_GP:TMQ36178.1;Name=TMQ36178.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525642.1;locus_tag=AO052_09760;product=two-component system response regulator;protein_id=TMQ36178.1;transl_table=11
##sequence-region LNKO01000134.1 1 3526
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000134.1	Genbank	region	1	3526	.	+	.	ID=LNKO01000134.1:1..3526;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000134.1	Genbank	gene	1	1215	.	+	.	ID=gene-AO052_09765;Name=AO052_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09765;partial=true;start_range=.,1
LNKO01000134.1	Protein Homology	CDS	1	1215	.	+	0	ID=cds-TMQ36060.1;Parent=gene-AO052_09765;Dbxref=NCBI_GP:TMQ36060.1;Name=TMQ36060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692124.1;locus_tag=AO052_09765;partial=true;product=sensor protein QseC;protein_id=TMQ36060.1;start_range=.,1;transl_table=11
LNKO01000134.1	Genbank	gene	1510	1857	.	+	.	ID=gene-AO052_09770;Name=AO052_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09770
LNKO01000134.1	GeneMarkS+	CDS	1510	1857	.	+	0	ID=cds-TMQ36061.1;Parent=gene-AO052_09770;Dbxref=NCBI_GP:TMQ36061.1;Name=TMQ36061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO052_09770;product=hypothetical protein;protein_id=TMQ36061.1;transl_table=11
LNKO01000134.1	Genbank	gene	2063	2326	.	+	.	ID=gene-AO052_09775;Name=AO052_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09775
LNKO01000134.1	Protein Homology	CDS	2063	2326	.	+	0	ID=cds-TMQ36062.1;Parent=gene-AO052_09775;Dbxref=NCBI_GP:TMQ36062.1;Name=TMQ36062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272529.1;locus_tag=AO052_09775;product=hypothetical protein;protein_id=TMQ36062.1;transl_table=11
LNKO01000134.1	Genbank	gene	2366	3211	.	-	.	ID=gene-AO052_09780;Name=AO052_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09780
LNKO01000134.1	Protein Homology	CDS	2366	3211	.	-	0	ID=cds-TMQ36063.1;Parent=gene-AO052_09780;Dbxref=NCBI_GP:TMQ36063.1;Name=TMQ36063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995342.1;locus_tag=AO052_09780;product=hypothetical protein;protein_id=TMQ36063.1;transl_table=11
LNKO01000134.1	Genbank	gene	3268	3387	.	-	.	ID=gene-AO052_09785;Name=AO052_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09785
LNKO01000134.1	Protein Homology	CDS	3268	3387	.	-	0	ID=cds-TMQ36064.1;Parent=gene-AO052_09785;Dbxref=NCBI_GP:TMQ36064.1;Name=TMQ36064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640690.1;locus_tag=AO052_09785;product=hypothetical protein;protein_id=TMQ36064.1;transl_table=11
##sequence-region LNKO01000135.1 1 11397
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000135.1	Genbank	region	1	11397	.	+	.	ID=LNKO01000135.1:1..11397;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000135.1	Genbank	gene	189	1334	.	-	.	ID=gene-AO052_09790;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AO052_09790
LNKO01000135.1	Protein Homology	CDS	189	1334	.	-	0	ID=cds-TMQ36046.1;Parent=gene-AO052_09790;Dbxref=NCBI_GP:TMQ36046.1;Name=TMQ36046.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005558021.1;locus_tag=AO052_09790;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=TMQ36046.1;transl_table=11
LNKO01000135.1	Genbank	gene	1546	2355	.	-	.	ID=gene-AO052_09795;Name=AO052_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09795
LNKO01000135.1	Protein Homology	CDS	1546	2355	.	-	0	ID=cds-TMQ36047.1;Parent=gene-AO052_09795;Dbxref=NCBI_GP:TMQ36047.1;Name=TMQ36047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638643.1;locus_tag=AO052_09795;product=glutamate racemase;protein_id=TMQ36047.1;transl_table=11
LNKO01000135.1	Genbank	gene	2385	4466	.	-	.	ID=gene-AO052_09800;Name=AO052_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09800
LNKO01000135.1	Protein Homology	CDS	2385	4466	.	-	0	ID=cds-TMQ36048.1;Parent=gene-AO052_09800;Dbxref=NCBI_GP:TMQ36048.1;Name=TMQ36048.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43809.1;locus_tag=AO052_09800;product=ATP-dependent DNA helicase RecG;protein_id=TMQ36048.1;transl_table=11
LNKO01000135.1	Genbank	gene	4463	6577	.	-	.	ID=gene-AO052_09805;Name=AO052_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09805
LNKO01000135.1	Protein Homology	CDS	4463	6577	.	-	0	ID=cds-TMQ36049.1;Parent=gene-AO052_09805;Dbxref=NCBI_GP:TMQ36049.1;Name=TMQ36049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550639.1;locus_tag=AO052_09805;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=TMQ36049.1;transl_table=11
LNKO01000135.1	Genbank	gene	6650	6916	.	-	.	ID=gene-AO052_09810;Name=AO052_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09810
LNKO01000135.1	Protein Homology	CDS	6650	6916	.	-	0	ID=cds-TMQ36050.1;Parent=gene-AO052_09810;Dbxref=NCBI_GP:TMQ36050.1;Name=TMQ36050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995753.1;locus_tag=AO052_09810;product=DNA-directed RNA polymerase subunit omega;protein_id=TMQ36050.1;transl_table=11
LNKO01000135.1	Genbank	gene	6979	7605	.	-	.	ID=gene-AO052_09815;Name=AO052_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09815
LNKO01000135.1	Protein Homology	CDS	6979	7605	.	-	0	ID=cds-TMQ36051.1;Parent=gene-AO052_09815;Dbxref=NCBI_GP:TMQ36051.1;Name=TMQ36051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJK3.1;locus_tag=AO052_09815;product=guanylate kinase;protein_id=TMQ36051.1;transl_table=11
LNKO01000135.1	Genbank	gene	7856	8875	.	+	.	ID=gene-AO052_09820;Name=AO052_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09820
LNKO01000135.1	Protein Homology	CDS	7856	8875	.	+	0	ID=cds-TMQ36052.1;Parent=gene-AO052_09820;Dbxref=NCBI_GP:TMQ36052.1;Name=TMQ36052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326504.1;locus_tag=AO052_09820;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=TMQ36052.1;transl_table=11
LNKO01000135.1	Genbank	gene	9069	10868	.	+	.	ID=gene-AO052_09825;Name=AO052_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09825
LNKO01000135.1	Protein Homology	CDS	9069	10868	.	+	0	ID=cds-TMQ36053.1;Parent=gene-AO052_09825;Dbxref=NCBI_GP:TMQ36053.1;Name=TMQ36053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649895.1;locus_tag=AO052_09825;product=long-chain fatty acid--CoA ligase;protein_id=TMQ36053.1;transl_table=11
LNKO01000135.1	Genbank	pseudogene	10904	11397	.	-	.	ID=gene-AO052_09830;Name=AO052_09830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09830;pseudo=true
LNKO01000135.1	Protein Homology	CDS	10904	11397	.	-	2	ID=cds-AO052_09830;Parent=gene-AO052_09830;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527209.1;locus_tag=AO052_09830;pseudo=true;transl_table=11
##sequence-region LNKO01000136.1 1 73962
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000136.1	Genbank	region	1	73962	.	+	.	ID=LNKO01000136.1:1..73962;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000136.1	Genbank	pseudogene	1	286	.	-	.	ID=gene-AO052_09835;Name=AO052_09835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09835;pseudo=true
LNKO01000136.1	Protein Homology	CDS	1	286	.	-	0	ID=cds-AO052_09835;Parent=gene-AO052_09835;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527209.1;locus_tag=AO052_09835;pseudo=true;transl_table=11
LNKO01000136.1	Genbank	gene	305	769	.	-	.	ID=gene-AO052_09840;Name=AO052_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09840
LNKO01000136.1	Protein Homology	CDS	305	769	.	-	0	ID=cds-TMQ35954.1;Parent=gene-AO052_09840;Dbxref=NCBI_GP:TMQ35954.1;Name=TMQ35954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634940.1;locus_tag=AO052_09840;product=rRNA maturation RNase YbeY;protein_id=TMQ35954.1;transl_table=11
LNKO01000136.1	Genbank	gene	1030	1842	.	-	.	ID=gene-AO052_09845;Name=AO052_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09845
LNKO01000136.1	Protein Homology	CDS	1030	1842	.	-	0	ID=cds-TMQ35955.1;Parent=gene-AO052_09845;Dbxref=NCBI_GP:TMQ35955.1;Name=TMQ35955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687439.1;locus_tag=AO052_09845;product=formate dehydrogenase accessory protein FdhD;protein_id=TMQ35955.1;transl_table=11
LNKO01000136.1	Genbank	gene	2113	2724	.	+	.	ID=gene-AO052_09850;Name=AO052_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09850
LNKO01000136.1	Protein Homology	CDS	2113	2724	.	+	0	ID=cds-TMQ35956.1;Parent=gene-AO052_09850;Dbxref=NCBI_GP:TMQ35956.1;Name=TMQ35956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657859.1;locus_tag=AO052_09850;product=sulfate ABC transporter substrate-binding protein;protein_id=TMQ35956.1;transl_table=11
LNKO01000136.1	Genbank	pseudogene	5071	5463	.	+	.	ID=gene-AO052_09855;Name=AO052_09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09855;pseudo=true
LNKO01000136.1	Protein Homology	CDS	5071	5463	.	+	0	ID=cds-AO052_09855;Parent=gene-AO052_09855;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693892.1;locus_tag=AO052_09855;pseudo=true;transl_table=11
LNKO01000136.1	Protein Homology	pseudogene	5533	6440	.	+	.	ID=gene-AO052_09860;Name=AO052_09860;Note=disrupted;description=formate dehydrogenase accessory protein FdhE;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_09860;pseudo=true
LNKO01000136.1	Genbank	gene	6479	6919	.	-	.	ID=gene-AO052_09865;Name=AO052_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09865
LNKO01000136.1	Protein Homology	CDS	6479	6919	.	-	0	ID=cds-TMQ35957.1;Parent=gene-AO052_09865;Dbxref=NCBI_GP:TMQ35957.1;Name=TMQ35957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525390.1;locus_tag=AO052_09865;product=ribosomal-protein-alanine acetyltransferase;protein_id=TMQ35957.1;transl_table=11
LNKO01000136.1	Genbank	gene	6922	7326	.	-	.	ID=gene-AO052_09870;Name=AO052_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09870
LNKO01000136.1	Protein Homology	CDS	6922	7326	.	-	0	ID=cds-TMQ35958.1;Parent=gene-AO052_09870;Dbxref=NCBI_GP:TMQ35958.1;Name=TMQ35958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271781.1;locus_tag=AO052_09870;product=DNA polymerase III subunit psi;protein_id=TMQ35958.1;transl_table=11
LNKO01000136.1	Genbank	gene	7432	8424	.	+	.	ID=gene-AO052_09875;Name=AO052_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09875
LNKO01000136.1	Protein Homology	CDS	7432	8424	.	+	0	ID=cds-TMQ35959.1;Parent=gene-AO052_09875;Dbxref=NCBI_GP:TMQ35959.1;Name=TMQ35959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550632.1;locus_tag=AO052_09875;product=16S rRNA methyltransferase;protein_id=TMQ35959.1;transl_table=11
LNKO01000136.1	Genbank	gene	8489	9397	.	-	.	ID=gene-AO052_09880;Name=AO052_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09880
LNKO01000136.1	Protein Homology	CDS	8489	9397	.	-	0	ID=cds-TMQ35960.1;Parent=gene-AO052_09880;Dbxref=NCBI_GP:TMQ35960.1;Name=TMQ35960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525392.1;locus_tag=AO052_09880;product=GTPase Era;protein_id=TMQ35960.1;transl_table=11
LNKO01000136.1	Genbank	gene	9394	10077	.	-	.	ID=gene-AO052_09885;Name=AO052_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09885
LNKO01000136.1	Protein Homology	CDS	9394	10077	.	-	0	ID=cds-TMQ35961.1;Parent=gene-AO052_09885;Dbxref=NCBI_GP:TMQ35961.1;Name=TMQ35961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357168.1;locus_tag=AO052_09885;product=RNA-binding protein;protein_id=TMQ35961.1;transl_table=11
LNKO01000136.1	Genbank	gene	10079	11128	.	-	.	ID=gene-AO052_09890;Name=AO052_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09890
LNKO01000136.1	Protein Homology	CDS	10079	11128	.	-	0	ID=cds-TMQ35962.1;Parent=gene-AO052_09890;Dbxref=NCBI_GP:TMQ35962.1;Name=TMQ35962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639603.1;locus_tag=AO052_09890;product=S26 family signal peptidase;protein_id=TMQ35962.1;transl_table=11
LNKO01000136.1	Genbank	gene	11137	12933	.	-	.	ID=gene-AO052_09895;Name=AO052_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09895
LNKO01000136.1	Protein Homology	CDS	11137	12933	.	-	0	ID=cds-TMQ35963.1;Parent=gene-AO052_09895;Dbxref=NCBI_GP:TMQ35963.1;Name=TMQ35963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991607.1;locus_tag=AO052_09895;product=elongation factor 4;protein_id=TMQ35963.1;transl_table=11
LNKO01000136.1	Genbank	gene	13240	13845	.	+	.	ID=gene-AO052_09900;Name=AO052_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09900
LNKO01000136.1	Protein Homology	CDS	13240	13845	.	+	0	ID=cds-TMQ35964.1;Parent=gene-AO052_09900;Dbxref=NCBI_GP:TMQ35964.1;Name=TMQ35964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525395.1;locus_tag=AO052_09900;product=fimbrial protein;protein_id=TMQ35964.1;transl_table=11
LNKO01000136.1	Genbank	gene	13914	14609	.	+	.	ID=gene-AO052_09905;Name=AO052_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09905
LNKO01000136.1	Protein Homology	CDS	13914	14609	.	+	0	ID=cds-TMQ35965.1;Parent=gene-AO052_09905;Dbxref=NCBI_GP:TMQ35965.1;Name=TMQ35965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527214.1;locus_tag=AO052_09905;product=molecular chaperone;protein_id=TMQ35965.1;transl_table=11
LNKO01000136.1	Genbank	gene	14665	17175	.	+	.	ID=gene-AO052_09910;Name=AO052_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09910
LNKO01000136.1	Protein Homology	CDS	14665	17175	.	+	0	ID=cds-TMQ35966.1;Parent=gene-AO052_09910;Dbxref=NCBI_GP:TMQ35966.1;Name=TMQ35966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525397.1;locus_tag=AO052_09910;product=usher protein;protein_id=TMQ35966.1;transl_table=11
LNKO01000136.1	Genbank	gene	17190	18314	.	+	.	ID=gene-AO052_09915;Name=AO052_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09915
LNKO01000136.1	Protein Homology	CDS	17190	18314	.	+	0	ID=cds-TMQ35967.1;Parent=gene-AO052_09915;Dbxref=NCBI_GP:TMQ35967.1;Name=TMQ35967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527216.1;locus_tag=AO052_09915;product=adhesin;protein_id=TMQ35967.1;transl_table=11
LNKO01000136.1	Genbank	gene	18396	18779	.	-	.	ID=gene-AO052_09920;Name=AO052_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09920
LNKO01000136.1	Protein Homology	CDS	18396	18779	.	-	0	ID=cds-TMQ35968.1;Parent=gene-AO052_09920;Dbxref=NCBI_GP:TMQ35968.1;Name=TMQ35968.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPH6.1;locus_tag=AO052_09920;product=autonomous glycyl radical cofactor GrcA;protein_id=TMQ35968.1;transl_table=11
LNKO01000136.1	Genbank	gene	19028	19687	.	+	.	ID=gene-AO052_09925;Name=AO052_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09925
LNKO01000136.1	Protein Homology	CDS	19028	19687	.	+	0	ID=cds-TMQ35969.1;Parent=gene-AO052_09925;Dbxref=NCBI_GP:TMQ35969.1;Name=TMQ35969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525400.1;locus_tag=AO052_09925;product=uracil-DNA glycosylase;protein_id=TMQ35969.1;transl_table=11
LNKO01000136.1	Genbank	gene	19756	21180	.	-	.	ID=gene-AO052_09930;Name=AO052_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09930
LNKO01000136.1	Protein Homology	CDS	19756	21180	.	-	0	ID=cds-TMQ35970.1;Parent=gene-AO052_09930;Dbxref=NCBI_GP:TMQ35970.1;Name=TMQ35970.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550626.1;locus_tag=AO052_09930;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB;protein_id=TMQ35970.1;transl_table=11
LNKO01000136.1	Genbank	gene	21598	23037	.	-	.	ID=gene-AO052_09935;Name=AO052_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09935
LNKO01000136.1	Protein Homology	CDS	21598	23037	.	-	0	ID=cds-TMQ35971.1;Parent=gene-AO052_09935;Dbxref=NCBI_GP:TMQ35971.1;Name=TMQ35971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995729.1;locus_tag=AO052_09935;product=hypothetical protein;protein_id=TMQ35971.1;transl_table=11
LNKO01000136.1	Genbank	gene	23039	24439	.	-	.	ID=gene-AO052_09940;Name=AO052_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09940
LNKO01000136.1	Protein Homology	CDS	23039	24439	.	-	0	ID=cds-TMQ35972.1;Parent=gene-AO052_09940;Dbxref=NCBI_GP:TMQ35972.1;Name=TMQ35972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668027.1;locus_tag=AO052_09940;product=2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase;protein_id=TMQ35972.1;transl_table=11
LNKO01000136.1	Genbank	gene	24617	26119	.	-	.	ID=gene-AO052_09945;Name=AO052_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09945
LNKO01000136.1	Protein Homology	CDS	24617	26119	.	-	0	ID=cds-TMQ35973.1;Parent=gene-AO052_09945;Dbxref=NCBI_GP:TMQ35973.1;Name=TMQ35973.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995727.1;locus_tag=AO052_09945;product=citrate lyase subunit alpha;protein_id=TMQ35973.1;transl_table=11
LNKO01000136.1	Genbank	gene	26134	27009	.	-	.	ID=gene-AO052_09950;Name=AO052_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09950
LNKO01000136.1	Protein Homology	CDS	26134	27009	.	-	0	ID=cds-TMQ35974.1;Parent=gene-AO052_09950;Dbxref=NCBI_GP:TMQ35974.1;Name=TMQ35974.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652631.1;locus_tag=AO052_09950;product=citrate lyase subunit beta;protein_id=TMQ35974.1;transl_table=11
LNKO01000136.1	Genbank	gene	27006	27293	.	-	.	ID=gene-AO052_09955;Name=AO052_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09955
LNKO01000136.1	Protein Homology	CDS	27006	27293	.	-	0	ID=cds-TMQ35975.1;Parent=gene-AO052_09955;Dbxref=NCBI_GP:TMQ35975.1;Name=TMQ35975.1;Note=acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657824.1;locus_tag=AO052_09955;product=citrate lyase ACP;protein_id=TMQ35975.1;transl_table=11
LNKO01000136.1	Genbank	gene	27331	28338	.	-	.	ID=gene-AO052_09960;Name=AO052_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09960
LNKO01000136.1	Protein Homology	CDS	27331	28338	.	-	0	ID=cds-TMQ35976.1;Parent=gene-AO052_09960;Dbxref=NCBI_GP:TMQ35976.1;Name=TMQ35976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639585.1;locus_tag=AO052_09960;product=citrate (pro-3S)-lyase;protein_id=TMQ35976.1;transl_table=11
LNKO01000136.1	Genbank	gene	28589	29551	.	-	.	ID=gene-AO052_09965;Name=AO052_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09965
LNKO01000136.1	Protein Homology	CDS	28589	29551	.	-	0	ID=cds-TMQ35977.1;Parent=gene-AO052_09965;Dbxref=NCBI_GP:TMQ35977.1;Name=TMQ35977.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663288.1;locus_tag=AO052_09965;product=lipoyl synthase;protein_id=TMQ35977.1;transl_table=11
LNKO01000136.1	Genbank	gene	29605	30243	.	-	.	ID=gene-AO052_09970;Name=AO052_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09970
LNKO01000136.1	Protein Homology	CDS	29605	30243	.	-	0	ID=cds-TMQ35978.1;Parent=gene-AO052_09970;Dbxref=NCBI_GP:TMQ35978.1;Name=TMQ35978.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525403.1;locus_tag=AO052_09970;product=lipoate--protein ligase;protein_id=TMQ35978.1;transl_table=11
LNKO01000136.1	Genbank	gene	30245	30523	.	-	.	ID=gene-AO052_09975;Name=AO052_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09975
LNKO01000136.1	Protein Homology	CDS	30245	30523	.	-	0	ID=cds-TMQ35979.1;Parent=gene-AO052_09975;Dbxref=NCBI_GP:TMQ35979.1;Name=TMQ35979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44465.1;locus_tag=AO052_09975;product=hypothetical protein;protein_id=TMQ35979.1;transl_table=11
LNKO01000136.1	Genbank	gene	30579	31760	.	-	.	ID=gene-AO052_09980;Name=AO052_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09980
LNKO01000136.1	Protein Homology	CDS	30579	31760	.	-	0	ID=cds-TMQ35980.1;Parent=gene-AO052_09980;Dbxref=NCBI_GP:TMQ35980.1;Name=TMQ35980.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271786.1;locus_tag=AO052_09980;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMQ35980.1;transl_table=11
LNKO01000136.1	Genbank	gene	31776	32639	.	-	.	ID=gene-AO052_09985;Name=AO052_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09985
LNKO01000136.1	Protein Homology	CDS	31776	32639	.	-	0	ID=cds-TMQ35981.1;Parent=gene-AO052_09985;Dbxref=NCBI_GP:TMQ35981.1;Name=TMQ35981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525405.1;locus_tag=AO052_09985;product=rare lipoprotein A;protein_id=TMQ35981.1;transl_table=11
LNKO01000136.1	Genbank	gene	32692	33807	.	-	.	ID=gene-AO052_09990;Name=AO052_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09990
LNKO01000136.1	Protein Homology	CDS	32692	33807	.	-	0	ID=cds-TMQ35982.1;Parent=gene-AO052_09990;Dbxref=NCBI_GP:TMQ35982.1;Name=TMQ35982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44468.1;locus_tag=AO052_09990;product=rod shape-determining protein RodA;protein_id=TMQ35982.1;transl_table=11
LNKO01000136.1	Genbank	gene	33797	35752	.	-	.	ID=gene-AO052_09995;Name=AO052_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_09995
LNKO01000136.1	Protein Homology	CDS	33797	35752	.	-	0	ID=cds-TMQ35983.1;Parent=gene-AO052_09995;Dbxref=NCBI_GP:TMQ35983.1;Name=TMQ35983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326527.1;locus_tag=AO052_09995;product=penicillin-binding protein 2;protein_id=TMQ35983.1;transl_table=11
LNKO01000136.1	Genbank	gene	35774	36241	.	-	.	ID=gene-AO052_10000;Name=AO052_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10000
LNKO01000136.1	Protein Homology	CDS	35774	36241	.	-	0	ID=cds-TMQ35984.1;Parent=gene-AO052_10000;Dbxref=NCBI_GP:TMQ35984.1;Name=TMQ35984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639560.1;locus_tag=AO052_10000;product=50S rRNA methyltransferase;protein_id=TMQ35984.1;transl_table=11
LNKO01000136.1	Genbank	gene	36295	36603	.	-	.	ID=gene-AO052_10005;Name=AO052_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10005
LNKO01000136.1	Protein Homology	CDS	36295	36603	.	-	0	ID=cds-TMQ35985.1;Parent=gene-AO052_10005;Dbxref=NCBI_GP:TMQ35985.1;Name=TMQ35985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652613.1;locus_tag=AO052_10005;product=ribosome-associated protein IOJAP;protein_id=TMQ35985.1;transl_table=11
LNKO01000136.1	Genbank	gene	36728	38383	.	-	.	ID=gene-AO052_10010;Name=AO052_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10010
LNKO01000136.1	Protein Homology	CDS	36728	38383	.	-	0	ID=cds-TMQ35986.1;Parent=gene-AO052_10010;Dbxref=NCBI_GP:TMQ35986.1;Name=TMQ35986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550621.1;locus_tag=AO052_10010;product=transporter;protein_id=TMQ35986.1;transl_table=11
LNKO01000136.1	Genbank	gene	38589	40367	.	+	.	ID=gene-AO052_10015;Name=AO052_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10015
LNKO01000136.1	Protein Homology	CDS	38589	40367	.	+	0	ID=cds-TMQ35987.1;Parent=gene-AO052_10015;Dbxref=NCBI_GP:TMQ35987.1;Name=TMQ35987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663266.1;locus_tag=AO052_10015;product=ABC transporter ATP-binding protein;protein_id=TMQ35987.1;transl_table=11
LNKO01000136.1	Genbank	gene	40499	41554	.	+	.	ID=gene-AO052_10020;Name=AO052_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10020
LNKO01000136.1	Protein Homology	CDS	40499	41554	.	+	0	ID=cds-TMQ35988.1;Parent=gene-AO052_10020;Dbxref=NCBI_GP:TMQ35988.1;Name=TMQ35988.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649840.1;locus_tag=AO052_10020;product=rod shape-determining protein MreB;protein_id=TMQ35988.1;transl_table=11
LNKO01000136.1	Genbank	gene	41634	42689	.	+	.	ID=gene-AO052_10025;Name=AO052_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10025
LNKO01000136.1	Protein Homology	CDS	41634	42689	.	+	0	ID=cds-TMQ35989.1;Parent=gene-AO052_10025;Dbxref=NCBI_GP:TMQ35989.1;Name=TMQ35989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995715.1;locus_tag=AO052_10025;product=rod shape-determining protein MreC;protein_id=TMQ35989.1;transl_table=11
LNKO01000136.1	Genbank	gene	42689	43177	.	+	.	ID=gene-AO052_10030;Name=AO052_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10030
LNKO01000136.1	Protein Homology	CDS	42689	43177	.	+	0	ID=cds-TMQ35990.1;Parent=gene-AO052_10030;Dbxref=NCBI_GP:TMQ35990.1;Name=TMQ35990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687480.1;locus_tag=AO052_10030;product=rod shape-determining protein MreD;protein_id=TMQ35990.1;transl_table=11
LNKO01000136.1	Genbank	gene	43228	44004	.	-	.	ID=gene-AO052_10035;Name=AO052_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10035
LNKO01000136.1	Protein Homology	CDS	43228	44004	.	-	0	ID=cds-TMQ35991.1;Parent=gene-AO052_10035;Dbxref=NCBI_GP:TMQ35991.1;Name=TMQ35991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663265.1;locus_tag=AO052_10035;product=hypothetical protein;protein_id=TMQ35991.1;transl_table=11
LNKO01000136.1	Genbank	gene	44014	44817	.	-	.	ID=gene-AO052_10040;Name=AO052_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10040
LNKO01000136.1	Protein Homology	CDS	44014	44817	.	-	0	ID=cds-TMQ35992.1;Parent=gene-AO052_10040;Dbxref=NCBI_GP:TMQ35992.1;Name=TMQ35992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356007.1;locus_tag=AO052_10040;product=exodeoxyribonuclease III;protein_id=TMQ35992.1;transl_table=11
LNKO01000136.1	Genbank	gene	44865	45539	.	-	.	ID=gene-AO052_10045;Name=AO052_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10045
LNKO01000136.1	Protein Homology	CDS	44865	45539	.	-	0	ID=cds-TMQ35993.1;Parent=gene-AO052_10045;Dbxref=NCBI_GP:TMQ35993.1;Name=TMQ35993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525411.1;locus_tag=AO052_10045;product=RNA pseudouridine synthase;protein_id=TMQ35993.1;transl_table=11
LNKO01000136.1	Genbank	gene	45539	46603	.	-	.	ID=gene-AO052_10050;Name=AO052_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10050
LNKO01000136.1	Protein Homology	CDS	45539	46603	.	-	0	ID=cds-TMQ35994.1;Parent=gene-AO052_10050;Dbxref=NCBI_GP:TMQ35994.1;Name=TMQ35994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693878.1;locus_tag=AO052_10050;product=hypothetical protein;protein_id=TMQ35994.1;transl_table=11
LNKO01000136.1	Genbank	gene	46663	47325	.	-	.	ID=gene-AO052_10055;Name=AO052_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10055
LNKO01000136.1	Protein Homology	CDS	46663	47325	.	-	0	ID=cds-TMQ35995.1;Parent=gene-AO052_10055;Dbxref=NCBI_GP:TMQ35995.1;Name=TMQ35995.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628031.1;locus_tag=AO052_10055;product=hypothetical protein;protein_id=TMQ35995.1;transl_table=11
LNKO01000136.1	Genbank	gene	47506	47595	.	+	.	ID=gene-AO052_10060;Name=AO052_10060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_10060
LNKO01000136.1	tRNAscan-SE	tRNA	47506	47595	.	+	.	ID=rna-AO052_10060;Parent=gene-AO052_10060;anticodon=(pos:47540..47542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10060;product=tRNA-Ser
LNKO01000136.1	tRNAscan-SE	exon	47506	47595	.	+	.	ID=exon-AO052_10060-1;Parent=rna-AO052_10060;anticodon=(pos:47540..47542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10060;product=tRNA-Ser
LNKO01000136.1	Genbank	gene	47652	48206	.	-	.	ID=gene-AO052_10065;Name=AO052_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10065
LNKO01000136.1	Protein Homology	CDS	47652	48206	.	-	0	ID=cds-TMQ35996.1;Parent=gene-AO052_10065;Dbxref=NCBI_GP:TMQ35996.1;Name=TMQ35996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326535.1;locus_tag=AO052_10065;product=hypothetical protein;protein_id=TMQ35996.1;transl_table=11
LNKO01000136.1	Genbank	gene	48310	48660	.	+	.	ID=gene-AO052_10070;Name=AO052_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10070
LNKO01000136.1	Protein Homology	CDS	48310	48660	.	+	0	ID=cds-TMQ35997.1;Parent=gene-AO052_10070;Dbxref=NCBI_GP:TMQ35997.1;Name=TMQ35997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525414.1;locus_tag=AO052_10070;product=hypothetical protein;protein_id=TMQ35997.1;transl_table=11
LNKO01000136.1	Genbank	gene	48675	49388	.	-	.	ID=gene-AO052_10075;Name=AO052_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10075
LNKO01000136.1	Protein Homology	CDS	48675	49388	.	-	0	ID=cds-TMQ35998.1;Parent=gene-AO052_10075;Dbxref=NCBI_GP:TMQ35998.1;Name=TMQ35998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643446.1;locus_tag=AO052_10075;product=hypothetical protein;protein_id=TMQ35998.1;transl_table=11
LNKO01000136.1	Genbank	gene	49486	51315	.	-	.	ID=gene-AO052_10080;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AO052_10080
LNKO01000136.1	Protein Homology	CDS	49486	51315	.	-	0	ID=cds-TMQ35999.1;Parent=gene-AO052_10080;Dbxref=NCBI_GP:TMQ35999.1;Name=TMQ35999.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326539.1;locus_tag=AO052_10080;product=excinuclease ABC subunit C;protein_id=TMQ35999.1;transl_table=11
LNKO01000136.1	Genbank	gene	51452	52216	.	-	.	ID=gene-AO052_10085;Name=AO052_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10085
LNKO01000136.1	Protein Homology	CDS	51452	52216	.	-	0	ID=cds-TMQ36000.1;Parent=gene-AO052_10085;Dbxref=NCBI_GP:TMQ36000.1;Name=TMQ36000.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525417.1;locus_tag=AO052_10085;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=TMQ36000.1;transl_table=11
LNKO01000136.1	Genbank	gene	52287	53285	.	-	.	ID=gene-AO052_10090;Name=AO052_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10090
LNKO01000136.1	Protein Homology	CDS	52287	53285	.	-	0	ID=cds-TMQ36001.1;Parent=gene-AO052_10090;Dbxref=NCBI_GP:TMQ36001.1;Name=TMQ36001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UB80.1;locus_tag=AO052_10090;product=tetraacyldisaccharide 4'-kinase;protein_id=TMQ36001.1;transl_table=11
LNKO01000136.1	Genbank	gene	53358	55121	.	-	.	ID=gene-AO052_10095;Name=AO052_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10095
LNKO01000136.1	Protein Homology	CDS	53358	55121	.	-	0	ID=cds-TMQ36002.1;Parent=gene-AO052_10095;Dbxref=NCBI_GP:TMQ36002.1;Name=TMQ36002.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691014.1;locus_tag=AO052_10095;product=lipid A export permease/ATP-binding protein MsbA;protein_id=TMQ36002.1;transl_table=11
LNKO01000136.1	Genbank	gene	55162	57528	.	-	.	ID=gene-AO052_10100;Name=AO052_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10100
LNKO01000136.1	Protein Homology	CDS	55162	57528	.	-	0	ID=cds-TMQ36003.1;Parent=gene-AO052_10100;Dbxref=NCBI_GP:TMQ36003.1;Name=TMQ36003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44408.1;locus_tag=AO052_10100;product=recombinase;protein_id=TMQ36003.1;transl_table=11
LNKO01000136.1	Genbank	gene	57787	58224	.	+	.	ID=gene-AO052_10105;Name=AO052_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10105
LNKO01000136.1	Protein Homology	CDS	57787	58224	.	+	0	ID=cds-TMQ36004.1;Parent=gene-AO052_10105;Dbxref=NCBI_GP:TMQ36004.1;Name=TMQ36004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766772.1;locus_tag=AO052_10105;product=RNA polymerase-binding protein DksA;protein_id=TMQ36004.1;transl_table=11
LNKO01000136.1	Genbank	gene	58471	59829	.	+	.	ID=gene-AO052_10110;Name=AO052_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10110
LNKO01000136.1	Protein Homology	CDS	58471	59829	.	+	0	ID=cds-TMQ36017.1;Parent=gene-AO052_10110;Dbxref=NCBI_GP:TMQ36017.1;Name=TMQ36017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44439.1;locus_tag=AO052_10110;product=poly(A) polymerase;protein_id=TMQ36017.1;transl_table=11
LNKO01000136.1	Genbank	gene	59838	60320	.	+	.	ID=gene-AO052_10115;Name=AO052_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10115
LNKO01000136.1	Protein Homology	CDS	59838	60320	.	+	0	ID=cds-TMQ36005.1;Parent=gene-AO052_10115;Dbxref=NCBI_GP:TMQ36005.1;Name=TMQ36005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663232.1;locus_tag=AO052_10115;product=7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;protein_id=TMQ36005.1;transl_table=11
LNKO01000136.1	Genbank	gene	60396	60872	.	+	.	ID=gene-AO052_10120;Name=AO052_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10120
LNKO01000136.1	Protein Homology	CDS	60396	60872	.	+	0	ID=cds-TMQ36006.1;Parent=gene-AO052_10120;Dbxref=NCBI_GP:TMQ36006.1;Name=TMQ36006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627897.1;locus_tag=AO052_10120;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=TMQ36006.1;transl_table=11
LNKO01000136.1	Genbank	gene	60880	62178	.	+	.	ID=gene-AO052_10125;Name=AO052_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10125
LNKO01000136.1	Protein Homology	CDS	60880	62178	.	+	0	ID=cds-TMQ36007.1;Parent=gene-AO052_10125;Dbxref=NCBI_GP:TMQ36007.1;Name=TMQ36007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691002.1;locus_tag=AO052_10125;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TMQ36007.1;transl_table=11
LNKO01000136.1	Genbank	gene	62179	64068	.	+	.	ID=gene-AO052_10130;Name=AO052_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10130
LNKO01000136.1	Protein Homology	CDS	62179	64068	.	+	0	ID=cds-TMQ36008.1;Parent=gene-AO052_10130;Dbxref=NCBI_GP:TMQ36008.1;Name=TMQ36008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH7.1;locus_tag=AO052_10130;product=DNA mismatch repair protein MutL;protein_id=TMQ36008.1;transl_table=11
LNKO01000136.1	Genbank	gene	64076	65011	.	+	.	ID=gene-AO052_10135;Name=AO052_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10135
LNKO01000136.1	Protein Homology	CDS	64076	65011	.	+	0	ID=cds-TMQ36009.1;Parent=gene-AO052_10135;Dbxref=NCBI_GP:TMQ36009.1;Name=TMQ36009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH6.1;locus_tag=AO052_10135;product=tRNA dimethylallyltransferase;protein_id=TMQ36009.1;transl_table=11
LNKO01000136.1	Genbank	gene	65017	67962	.	+	.	ID=gene-AO052_10140;Name=AO052_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10140
LNKO01000136.1	Protein Homology	CDS	65017	67962	.	+	0	ID=cds-TMQ36010.1;Parent=gene-AO052_10140;Dbxref=NCBI_GP:TMQ36010.1;Name=TMQ36010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44419.1;locus_tag=AO052_10140;product=glutamine-synthetase adenylyltransferase;protein_id=TMQ36010.1;transl_table=11
LNKO01000136.1	Genbank	gene	68047	69723	.	-	.	ID=gene-AO052_10145;Name=AO052_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10145
LNKO01000136.1	Protein Homology	CDS	68047	69723	.	-	0	ID=cds-TMQ36011.1;Parent=gene-AO052_10145;Dbxref=NCBI_GP:TMQ36011.1;Name=TMQ36011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44496.1;locus_tag=AO052_10145;product=DNA repair protein RecN;protein_id=TMQ36011.1;transl_table=11
LNKO01000136.1	Genbank	gene	69835	70725	.	-	.	ID=gene-AO052_10150;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AO052_10150
LNKO01000136.1	Protein Homology	CDS	69835	70725	.	-	0	ID=cds-TMQ36012.1;Parent=gene-AO052_10150;Dbxref=NCBI_GP:TMQ36012.1;Name=TMQ36012.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH3.2;locus_tag=AO052_10150;product=NAD kinase;protein_id=TMQ36012.1;transl_table=11
LNKO01000136.1	Genbank	gene	70717	71421	.	+	.	ID=gene-AO052_10155;Name=AO052_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10155
LNKO01000136.1	Protein Homology	CDS	70717	71421	.	+	0	ID=cds-TMQ36013.1;Parent=gene-AO052_10155;Dbxref=NCBI_GP:TMQ36013.1;Name=TMQ36013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652537.1;locus_tag=AO052_10155;product=molecular chaperone GrpE;protein_id=TMQ36013.1;transl_table=11
LNKO01000136.1	Genbank	gene	71434	71778	.	-	.	ID=gene-AO052_10160;Name=AO052_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10160
LNKO01000136.1	Protein Homology	CDS	71434	71778	.	-	0	ID=cds-TMQ36014.1;Parent=gene-AO052_10160;Dbxref=NCBI_GP:TMQ36014.1;Name=TMQ36014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054796.1;locus_tag=AO052_10160;product=hypothetical protein;protein_id=TMQ36014.1;transl_table=11
LNKO01000136.1	Genbank	gene	71771	72211	.	-	.	ID=gene-AO052_10165;Name=AO052_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10165
LNKO01000136.1	Protein Homology	CDS	71771	72211	.	-	0	ID=cds-TMQ36015.1;Parent=gene-AO052_10165;Dbxref=NCBI_GP:TMQ36015.1;Name=TMQ36015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672289.1;locus_tag=AO052_10165;product=hypothetical protein;protein_id=TMQ36015.1;transl_table=11
LNKO01000136.1	Genbank	gene	72492	73962	.	+	.	ID=gene-AO052_10170;Name=AO052_10170;end_range=73962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10170;partial=true
LNKO01000136.1	Protein Homology	CDS	72492	73962	.	+	0	ID=cds-TMQ36016.1;Parent=gene-AO052_10170;Dbxref=NCBI_GP:TMQ36016.1;Name=TMQ36016.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;end_range=73962,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961823.1;locus_tag=AO052_10170;partial=true;product=anaerobic ribonucleoside triphosphate reductase;protein_id=TMQ36016.1;transl_table=11
##sequence-region LNKO01000137.1 1 14644
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
LNKO01000137.1	Genbank	region	1	14644	.	+	.	ID=LNKO01000137.1:1..14644;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Serrana;gbkey=Src;isolation-source=Oropharynx from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3042
LNKO01000137.1	Genbank	pseudogene	1	595	.	+	.	ID=gene-AO052_10175;Name=AO052_10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_10175;pseudo=true
LNKO01000137.1	Protein Homology	CDS	1	595	.	+	1	ID=cds-AO052_10175;Parent=gene-AO052_10175;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652533.1;locus_tag=AO052_10175;pseudo=true;transl_table=11
LNKO01000137.1	Genbank	gene	714	1574	.	+	.	ID=gene-AO052_10180;Name=AO052_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10180
LNKO01000137.1	Protein Homology	CDS	714	1574	.	+	0	ID=cds-TMQ35863.1;Parent=gene-AO052_10180;Dbxref=NCBI_GP:TMQ35863.1;Name=TMQ35863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708204.1;locus_tag=AO052_10180;product=acyl-CoA thioesterase II;protein_id=TMQ35863.1;transl_table=11
LNKO01000137.1	Genbank	gene	1735	3114	.	-	.	ID=gene-AO052_10185;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AO052_10185
LNKO01000137.1	Protein Homology	CDS	1735	3114	.	-	0	ID=cds-TMQ35864.1;Parent=gene-AO052_10185;Dbxref=NCBI_GP:TMQ35864.1;Name=TMQ35864.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699864.1;locus_tag=AO052_10185;product=cysteinyl-tRNA synthetase;protein_id=TMQ35864.1;transl_table=11
LNKO01000137.1	Genbank	gene	3217	3726	.	+	.	ID=gene-AO052_10190;Name=AO052_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10190
LNKO01000137.1	Protein Homology	CDS	3217	3726	.	+	0	ID=cds-TMQ35865.1;Parent=gene-AO052_10190;Dbxref=NCBI_GP:TMQ35865.1;Name=TMQ35865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525429.1;locus_tag=AO052_10190;product=peptidylprolyl isomerase;protein_id=TMQ35865.1;transl_table=11
LNKO01000137.1	Genbank	gene	3781	4569	.	+	.	ID=gene-AO052_10195;Name=AO052_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10195
LNKO01000137.1	Protein Homology	CDS	3781	4569	.	+	0	ID=cds-TMQ35866.1;Parent=gene-AO052_10195;Dbxref=NCBI_GP:TMQ35866.1;Name=TMQ35866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766755.1;locus_tag=AO052_10195;product=deoxyribonuclease;protein_id=TMQ35866.1;transl_table=11
LNKO01000137.1	Genbank	gene	4631	4888	.	+	.	ID=gene-AO052_10200;Name=AO052_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10200
LNKO01000137.1	Protein Homology	CDS	4631	4888	.	+	0	ID=cds-TMQ35867.1;Parent=gene-AO052_10200;Dbxref=NCBI_GP:TMQ35867.1;Name=TMQ35867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663184.1;locus_tag=AO052_10200;product=hypothetical protein;protein_id=TMQ35867.1;transl_table=11
LNKO01000137.1	Genbank	gene	4899	5171	.	+	.	ID=gene-AO052_10205;Name=AO052_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10205
LNKO01000137.1	Protein Homology	CDS	4899	5171	.	+	0	ID=cds-TMQ35868.1;Parent=gene-AO052_10205;Dbxref=NCBI_GP:TMQ35868.1;Name=TMQ35868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525431.1;locus_tag=AO052_10205;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=TMQ35868.1;transl_table=11
LNKO01000137.1	Genbank	gene	5221	5544	.	-	.	ID=gene-AO052_10210;Name=AO052_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10210
LNKO01000137.1	Protein Homology	CDS	5221	5544	.	-	0	ID=cds-TMQ35869.1;Parent=gene-AO052_10210;Dbxref=NCBI_GP:TMQ35869.1;Name=TMQ35869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054802.1;locus_tag=AO052_10210;product=thioredoxin;protein_id=TMQ35869.1;transl_table=11
LNKO01000137.1	Genbank	gene	5664	6659	.	-	.	ID=gene-AO052_10215;Name=AO052_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10215
LNKO01000137.1	Protein Homology	CDS	5664	6659	.	-	0	ID=cds-TMQ35870.1;Parent=gene-AO052_10215;Dbxref=NCBI_GP:TMQ35870.1;Name=TMQ35870.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054803.1;locus_tag=AO052_10215;product=lactate dehydrogenase;protein_id=TMQ35870.1;transl_table=11
LNKO01000137.1	Genbank	gene	6672	7781	.	-	.	ID=gene-AO052_10220;Name=AO052_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10220
LNKO01000137.1	Protein Homology	CDS	6672	7781	.	-	0	ID=cds-TMQ35871.1;Parent=gene-AO052_10220;Dbxref=NCBI_GP:TMQ35871.1;Name=TMQ35871.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44502.1;locus_tag=AO052_10220;product=cystathionine gamma-synthase;protein_id=TMQ35871.1;transl_table=11
LNKO01000137.1	Genbank	gene	8028	8103	.	+	.	ID=gene-AO052_10225;Name=AO052_10225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_10225
LNKO01000137.1	tRNAscan-SE	tRNA	8028	8103	.	+	.	ID=rna-AO052_10225;Parent=gene-AO052_10225;anticodon=(pos:8061..8063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10225;product=tRNA-Gly
LNKO01000137.1	tRNAscan-SE	exon	8028	8103	.	+	.	ID=exon-AO052_10225-1;Parent=rna-AO052_10225;anticodon=(pos:8061..8063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10225;product=tRNA-Gly
LNKO01000137.1	Genbank	gene	8110	8183	.	+	.	ID=gene-AO052_10230;Name=AO052_10230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_10230
LNKO01000137.1	tRNAscan-SE	tRNA	8110	8183	.	+	.	ID=rna-AO052_10230;Parent=gene-AO052_10230;anticodon=(pos:8142..8144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10230;product=tRNA-Cys
LNKO01000137.1	tRNAscan-SE	exon	8110	8183	.	+	.	ID=exon-AO052_10230-1;Parent=rna-AO052_10230;anticodon=(pos:8142..8144);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10230;product=tRNA-Cys
LNKO01000137.1	Genbank	gene	8211	8297	.	+	.	ID=gene-AO052_10235;Name=AO052_10235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_10235
LNKO01000137.1	tRNAscan-SE	tRNA	8211	8297	.	+	.	ID=rna-AO052_10235;Parent=gene-AO052_10235;anticodon=(pos:8245..8247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10235;product=tRNA-Leu
LNKO01000137.1	tRNAscan-SE	exon	8211	8297	.	+	.	ID=exon-AO052_10235-1;Parent=rna-AO052_10235;anticodon=(pos:8245..8247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10235;product=tRNA-Leu
LNKO01000137.1	Genbank	gene	8349	8424	.	+	.	ID=gene-AO052_10240;Name=AO052_10240;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO052_10240
LNKO01000137.1	tRNAscan-SE	tRNA	8349	8424	.	+	.	ID=rna-AO052_10240;Parent=gene-AO052_10240;anticodon=(pos:8382..8384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10240;product=tRNA-Lys
LNKO01000137.1	tRNAscan-SE	exon	8349	8424	.	+	.	ID=exon-AO052_10240-1;Parent=rna-AO052_10240;anticodon=(pos:8382..8384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO052_10240;product=tRNA-Lys
LNKO01000137.1	Genbank	gene	8972	10573	.	-	.	ID=gene-AO052_10245;Name=AO052_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10245
LNKO01000137.1	Protein Homology	CDS	8972	10573	.	-	0	ID=cds-TMQ35872.1;Parent=gene-AO052_10245;Dbxref=NCBI_GP:TMQ35872.1;Name=TMQ35872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536842.1;locus_tag=AO052_10245;product=hypothetical protein;protein_id=TMQ35872.1;transl_table=11
LNKO01000137.1	Genbank	gene	10574	11134	.	-	.	ID=gene-AO052_10250;Name=AO052_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10250
LNKO01000137.1	Protein Homology	CDS	10574	11134	.	-	0	ID=cds-TMQ35873.1;Parent=gene-AO052_10250;Dbxref=NCBI_GP:TMQ35873.1;Name=TMQ35873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525436.1;locus_tag=AO052_10250;product=hypothetical protein;protein_id=TMQ35873.1;transl_table=11
LNKO01000137.1	Genbank	gene	11121	11888	.	-	.	ID=gene-AO052_10255;Name=AO052_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10255
LNKO01000137.1	Protein Homology	CDS	11121	11888	.	-	0	ID=cds-TMQ35874.1;Parent=gene-AO052_10255;Dbxref=NCBI_GP:TMQ35874.1;Name=TMQ35874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536840.1;locus_tag=AO052_10255;product=hypothetical protein;protein_id=TMQ35874.1;transl_table=11
LNKO01000137.1	Genbank	gene	11907	12176	.	-	.	ID=gene-AO052_10260;Name=AO052_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10260
LNKO01000137.1	Protein Homology	CDS	11907	12176	.	-	0	ID=cds-TMQ35875.1;Parent=gene-AO052_10260;Dbxref=NCBI_GP:TMQ35875.1;Name=TMQ35875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525438.1;locus_tag=AO052_10260;product=DNA helicase UvrD;protein_id=TMQ35875.1;transl_table=11
LNKO01000137.1	Genbank	gene	12155	12769	.	-	.	ID=gene-AO052_10265;Name=AO052_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10265
LNKO01000137.1	Protein Homology	CDS	12155	12769	.	-	0	ID=cds-TMQ35876.1;Parent=gene-AO052_10265;Dbxref=NCBI_GP:TMQ35876.1;Name=TMQ35876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525439.1;locus_tag=AO052_10265;product=hypothetical protein;protein_id=TMQ35876.1;transl_table=11
LNKO01000137.1	Genbank	gene	12848	13126	.	+	.	ID=gene-AO052_10270;Name=AO052_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10270
LNKO01000137.1	Protein Homology	CDS	12848	13126	.	+	0	ID=cds-TMQ35877.1;Parent=gene-AO052_10270;Dbxref=NCBI_GP:TMQ35877.1;Name=TMQ35877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525440.1;locus_tag=AO052_10270;product=Killer protein;protein_id=TMQ35877.1;transl_table=11
LNKO01000137.1	Genbank	gene	13143	13454	.	+	.	ID=gene-AO052_10275;Name=AO052_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO052_10275
LNKO01000137.1	Protein Homology	CDS	13143	13454	.	+	0	ID=cds-TMQ35878.1;Parent=gene-AO052_10275;Dbxref=NCBI_GP:TMQ35878.1;Name=TMQ35878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525441.1;locus_tag=AO052_10275;product=XRE family transcriptional regulator;protein_id=TMQ35878.1;transl_table=11
LNKO01000137.1	Genbank	pseudogene	13500	14644	.	-	.	ID=gene-AO052_10280;Name=AO052_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO052_10280;pseudo=true
LNKO01000137.1	Protein Homology	CDS	13500	14644	.	-	2	ID=cds-AO052_10280;Parent=gene-AO052_10280;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525442.1;locus_tag=AO052_10280;pseudo=true;transl_table=11
###